Query 008311
Match_columns 570
No_of_seqs 295 out of 1123
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 23:12:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008311.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008311hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s9f_A Tryparedoxin; thioredox 99.9 3.8E-21 1.3E-25 178.6 14.7 128 330-474 33-164 (165)
2 1i5g_A Tryparedoxin II; electr 99.9 7.1E-21 2.4E-25 170.4 15.3 129 330-474 12-144 (144)
3 1o8x_A Tryparedoxin, TRYX, TXN 99.8 1.8E-20 6E-25 168.5 15.0 129 330-475 13-145 (146)
4 1o73_A Tryparedoxin; electron 99.8 2.6E-20 8.8E-25 166.1 15.7 128 330-474 13-144 (144)
5 3eur_A Uncharacterized protein 99.8 2.3E-19 7.7E-24 160.5 12.5 115 327-458 12-131 (142)
6 3ewl_A Uncharacterized conserv 99.8 1.7E-18 6E-23 153.9 12.0 112 328-456 9-125 (142)
7 4fo5_A Thioredoxin-like protei 99.8 1.4E-18 4.9E-23 155.5 10.2 108 333-457 19-130 (143)
8 2lrt_A Uncharacterized protein 99.8 4.4E-18 1.5E-22 155.2 11.9 110 328-456 17-129 (152)
9 1nm3_A Protein HI0572; hybrid, 99.7 1.6E-17 5.5E-22 162.9 14.5 195 331-569 14-228 (241)
10 3fw2_A Thiol-disulfide oxidore 99.7 1.5E-17 5E-22 150.0 11.7 115 327-457 12-133 (150)
11 2lrn_A Thiol:disulfide interch 99.7 1.6E-17 5.5E-22 150.1 11.9 113 328-457 11-126 (152)
12 3eyt_A Uncharacterized protein 99.7 8.3E-18 2.8E-22 152.1 8.1 111 335-456 17-133 (158)
13 3raz_A Thioredoxin-related pro 99.7 3.2E-17 1.1E-21 148.0 11.8 110 329-456 6-121 (151)
14 2lus_A Thioredoxion; CR-Trp16, 99.5 7.7E-19 2.6E-23 155.7 0.0 120 330-463 8-131 (143)
15 3lor_A Thiol-disulfide isomera 99.7 1.6E-17 5.4E-22 150.2 8.1 112 334-456 18-136 (160)
16 3fkf_A Thiol-disulfide oxidore 99.7 4.2E-17 1.5E-21 144.6 9.7 114 327-457 12-131 (148)
17 2ggt_A SCO1 protein homolog, m 99.7 3E-16 1E-20 142.4 13.5 119 329-456 6-142 (164)
18 3hcz_A Possible thiol-disulfid 99.7 1.8E-17 6E-22 147.1 5.2 113 327-456 12-127 (148)
19 3drn_A Peroxiredoxin, bacterio 99.7 1.5E-16 5.2E-21 146.0 11.3 110 327-456 9-126 (161)
20 2f9s_A Thiol-disulfide oxidore 99.7 1.7E-16 5.9E-21 142.6 10.8 109 329-456 9-119 (151)
21 3gl3_A Putative thiol:disulfid 99.7 2.7E-16 9.4E-21 140.9 11.7 108 329-456 12-121 (152)
22 4evm_A Thioredoxin family prot 99.7 4.6E-16 1.6E-20 134.8 12.5 114 329-456 5-120 (138)
23 2rli_A SCO2 protein homolog, m 99.7 8.2E-16 2.8E-20 140.7 14.7 120 328-456 8-145 (171)
24 2h30_A Thioredoxin, peptide me 99.7 8.2E-17 2.8E-21 146.1 7.2 115 329-456 21-137 (164)
25 3kcm_A Thioredoxin family prot 99.7 5.5E-16 1.9E-20 139.2 12.1 111 328-456 10-122 (154)
26 2f8a_A Glutathione peroxidase 99.7 6.3E-16 2.2E-20 149.8 13.1 128 323-456 21-188 (208)
27 3or5_A Thiol:disulfide interch 99.6 7.4E-16 2.5E-20 139.6 12.4 108 329-456 17-132 (165)
28 3gkn_A Bacterioferritin comigr 99.6 3.3E-16 1.1E-20 143.0 10.1 106 331-456 20-140 (163)
29 3u5r_E Uncharacterized protein 99.6 2.8E-16 9.6E-21 152.4 9.7 118 328-457 40-160 (218)
30 4g2e_A Peroxiredoxin; redox pr 99.6 8E-17 2.7E-21 148.6 5.4 109 328-456 12-134 (157)
31 3dwv_A Glutathione peroxidase- 99.6 5.4E-17 1.8E-21 153.3 3.7 121 327-456 27-164 (187)
32 3erw_A Sporulation thiol-disul 99.6 8.2E-16 2.8E-20 135.5 10.6 110 330-456 19-130 (145)
33 2cvb_A Probable thiol-disulfid 99.6 7E-16 2.4E-20 144.3 10.5 115 329-456 16-132 (188)
34 3cmi_A Peroxiredoxin HYR1; thi 99.6 7.3E-16 2.5E-20 142.6 10.4 115 329-456 15-149 (171)
35 3lwa_A Secreted thiol-disulfid 99.6 8.6E-16 2.9E-20 143.1 10.8 116 329-456 40-162 (183)
36 3ha9_A Uncharacterized thiored 99.6 6.1E-16 2.1E-20 141.3 9.3 114 328-455 19-145 (165)
37 1lu4_A Soluble secreted antige 99.6 1E-15 3.5E-20 133.8 10.3 105 329-454 7-113 (136)
38 2lja_A Putative thiol-disulfid 99.6 7.7E-16 2.6E-20 138.0 9.1 109 330-456 14-124 (152)
39 3ztl_A Thioredoxin peroxidase; 99.6 7.6E-16 2.6E-20 150.1 9.4 110 333-456 56-175 (222)
40 3hdc_A Thioredoxin family prot 99.6 9.4E-16 3.2E-20 139.6 8.9 106 329-456 24-131 (158)
41 1jfu_A Thiol:disulfide interch 99.6 1.4E-15 4.9E-20 141.7 10.2 111 329-456 43-159 (186)
42 3ixr_A Bacterioferritin comigr 99.6 1.3E-15 4.4E-20 143.3 9.7 107 330-456 35-156 (179)
43 2l5o_A Putative thioredoxin; s 99.6 1.2E-15 4.1E-20 136.8 9.0 112 327-456 9-122 (153)
44 1xvw_A Hypothetical protein RV 99.6 9.4E-16 3.2E-20 139.4 8.3 111 328-456 17-137 (160)
45 2c0d_A Thioredoxin peroxidase 99.6 9.3E-16 3.2E-20 150.3 8.9 116 328-457 33-162 (221)
46 2i3y_A Epididymal secretory gl 99.6 3.3E-15 1.1E-19 146.3 12.7 121 329-456 38-192 (215)
47 2v1m_A Glutathione peroxidase; 99.6 6.5E-15 2.2E-19 134.2 13.6 118 329-456 14-148 (169)
48 2pn8_A Peroxiredoxin-4; thiore 99.6 1.2E-15 4.3E-20 147.8 9.3 109 335-457 37-155 (211)
49 2b5x_A YKUV protein, TRXY; thi 99.6 2.2E-15 7.7E-20 133.2 9.7 109 333-456 16-126 (148)
50 1zof_A Alkyl hydroperoxide-red 99.6 7E-16 2.4E-20 146.5 6.9 114 330-457 11-139 (198)
51 2p5q_A Glutathione peroxidase 99.6 6.7E-15 2.3E-19 134.2 13.0 117 329-456 15-149 (170)
52 1psq_A Probable thiol peroxida 99.6 2.2E-15 7.7E-20 138.7 9.7 108 329-457 25-142 (163)
53 3me7_A Putative uncharacterize 99.6 5.9E-15 2E-19 137.6 12.5 118 329-456 11-142 (170)
54 2b7k_A SCO1 protein; metalloch 99.6 6.4E-15 2.2E-19 140.8 13.0 117 328-456 23-160 (200)
55 2vup_A Glutathione peroxidase- 99.6 6.8E-16 2.3E-20 145.8 6.1 117 328-456 30-166 (190)
56 3ia1_A THIO-disulfide isomeras 99.6 5.9E-15 2E-19 132.7 11.9 111 327-456 12-125 (154)
57 2obi_A PHGPX, GPX-4, phospholi 99.6 4.8E-15 1.6E-19 138.7 11.7 116 329-456 30-165 (183)
58 1zzo_A RV1677; thioredoxin fol 99.6 4.3E-15 1.5E-19 129.2 10.6 106 329-454 8-115 (136)
59 1xzo_A BSSCO, hypothetical pro 99.6 3.7E-15 1.3E-19 136.7 10.6 117 328-456 15-151 (174)
60 2ls5_A Uncharacterized protein 99.4 9.7E-17 3.3E-21 145.7 0.0 110 329-456 16-130 (159)
61 2r37_A Glutathione peroxidase 99.6 5.5E-15 1.9E-19 143.6 12.3 56 329-391 20-78 (207)
62 4gqc_A Thiol peroxidase, perox 99.6 1.8E-16 6.1E-21 147.9 1.7 110 327-456 12-136 (164)
63 3qpm_A Peroxiredoxin; oxidored 99.6 3.3E-15 1.1E-19 148.2 10.8 116 327-456 53-183 (240)
64 3kh7_A Thiol:disulfide interch 99.6 5.4E-15 1.8E-19 138.2 11.6 111 324-456 34-148 (176)
65 3kij_A Probable glutathione pe 99.6 1.3E-14 4.5E-19 135.6 14.2 120 329-456 21-151 (180)
66 2p31_A CL683, glutathione pero 99.6 4.5E-16 1.6E-20 146.0 3.9 117 328-456 31-162 (181)
67 2ywi_A Hypothetical conserved 99.6 1.7E-15 5.9E-20 142.0 7.6 116 329-456 27-146 (196)
68 1n8j_A AHPC, alkyl hydroperoxi 99.6 3.3E-15 1.1E-19 141.4 9.4 111 331-457 12-134 (186)
69 1qmv_A Human thioredoxin perox 99.6 3E-15 1E-19 142.2 9.1 112 331-456 16-140 (197)
70 2gs3_A PHGPX, GPX-4, phospholi 99.6 1.6E-15 5.6E-20 142.6 7.2 117 328-456 31-167 (185)
71 1uul_A Tryparedoxin peroxidase 99.6 3.2E-15 1.1E-19 142.8 9.2 108 335-456 23-142 (202)
72 1zye_A Thioredoxin-dependent p 99.6 3.4E-15 1.2E-19 145.5 9.2 110 333-456 43-162 (220)
73 2bmx_A Alkyl hydroperoxidase C 99.6 3.3E-15 1.1E-19 141.7 8.6 105 337-457 36-148 (195)
74 1we0_A Alkyl hydroperoxide red 99.6 4.5E-15 1.5E-19 139.4 9.3 109 330-457 11-135 (187)
75 3p7x_A Probable thiol peroxida 99.6 4E-15 1.4E-19 137.4 8.3 110 327-457 27-145 (166)
76 2h01_A 2-Cys peroxiredoxin; th 99.6 3.3E-15 1.1E-19 141.1 7.9 113 331-457 11-137 (192)
77 3idv_A Protein disulfide-isome 99.6 2E-14 7E-19 138.5 13.1 170 344-566 30-210 (241)
78 2k6v_A Putative cytochrome C o 99.6 9.2E-15 3.2E-19 133.5 10.1 118 327-457 17-153 (172)
79 4hde_A SCO1/SENC family lipopr 99.5 2.7E-14 9.3E-19 133.6 12.8 121 327-456 13-149 (170)
80 1q98_A Thiol peroxidase, TPX; 99.5 3.3E-15 1.1E-19 138.1 5.8 108 329-457 26-146 (165)
81 2hyx_A Protein DIPZ; thioredox 99.5 1E-14 3.6E-19 152.9 10.0 111 332-456 68-180 (352)
82 1tp9_A Peroxiredoxin, PRX D (t 99.5 1.6E-14 5.4E-19 133.5 9.9 111 327-456 9-142 (162)
83 2yzh_A Probable thiol peroxida 99.5 1E-14 3.5E-19 135.1 8.1 106 330-457 31-149 (171)
84 2i81_A 2-Cys peroxiredoxin; st 99.5 1.3E-14 4.4E-19 140.9 9.0 113 330-456 31-157 (213)
85 2a4v_A Peroxiredoxin DOT5; yea 99.5 1.2E-14 3.9E-19 133.0 8.2 107 329-457 16-133 (159)
86 1kng_A Thiol:disulfide interch 99.5 3.1E-14 1.1E-18 127.7 10.5 109 327-456 15-133 (156)
87 2wfc_A Peroxiredoxin 5, PRDX5; 99.5 2.1E-14 7.1E-19 134.5 9.6 109 329-456 12-138 (167)
88 3tjj_A Peroxiredoxin-4; thiore 99.5 8.2E-15 2.8E-19 146.9 7.3 116 327-456 67-197 (254)
89 2jsy_A Probable thiol peroxida 99.5 7.1E-15 2.4E-19 135.0 5.7 109 328-457 26-144 (167)
90 3zrd_A Thiol peroxidase; oxido 99.5 1.4E-14 5E-19 139.2 6.7 108 329-457 61-181 (200)
91 1xvq_A Thiol peroxidase; thior 99.5 1.5E-14 5.2E-19 135.1 6.4 106 329-457 27-145 (175)
92 2b1k_A Thiol:disulfide interch 99.5 8E-14 2.8E-18 127.5 10.8 106 329-456 31-141 (168)
93 3uma_A Hypothetical peroxiredo 99.5 5.2E-14 1.8E-18 134.5 8.8 130 327-482 31-182 (184)
94 3mng_A Peroxiredoxin-5, mitoch 99.5 4.8E-14 1.7E-18 133.4 8.4 110 329-457 24-153 (173)
95 1prx_A HORF6; peroxiredoxin, h 99.5 8.9E-14 3E-18 136.5 10.2 115 328-457 13-147 (224)
96 1xcc_A 1-Cys peroxiredoxin; un 99.5 9.1E-14 3.1E-18 136.1 8.3 114 329-457 12-144 (220)
97 2v2g_A Peroxiredoxin 6; oxidor 99.5 7.2E-14 2.5E-18 138.5 7.6 114 328-457 11-143 (233)
98 3a2v_A Probable peroxiredoxin; 99.4 8.8E-14 3E-18 139.5 7.9 112 330-456 15-139 (249)
99 2pwj_A Mitochondrial peroxired 99.4 2.1E-13 7.2E-18 127.8 8.2 101 337-456 33-150 (171)
100 3sbc_A Peroxiredoxin TSA1; alp 99.3 1.6E-12 5.4E-17 128.1 9.1 115 327-455 28-157 (216)
101 3tue_A Tryparedoxin peroxidase 99.3 8.5E-12 2.9E-16 123.1 9.5 115 327-455 31-161 (219)
102 3hxs_A Thioredoxin, TRXP; elec 99.3 1.3E-11 4.3E-16 109.9 9.5 82 332-455 37-120 (141)
103 3ul3_B Thioredoxin, thioredoxi 99.3 2E-11 6.7E-16 107.7 10.6 86 328-456 24-111 (128)
104 4eo3_A Bacterioferritin comigr 99.3 1E-11 3.4E-16 128.6 9.9 106 328-455 6-116 (322)
105 3keb_A Probable thiol peroxida 99.3 5.9E-12 2E-16 124.6 7.6 107 329-458 31-154 (224)
106 1z6n_A Hypothetical protein PA 99.3 6.6E-12 2.2E-16 118.4 7.3 77 340-456 48-126 (167)
107 2ju5_A Thioredoxin disulfide i 99.2 3.7E-12 1.3E-16 116.8 5.1 91 335-456 36-132 (154)
108 3f9u_A Putative exported cytoc 99.2 1.3E-12 4.5E-17 120.7 1.1 102 339-456 40-146 (172)
109 2l57_A Uncharacterized protein 99.2 4.4E-11 1.5E-15 104.5 10.2 77 340-456 20-98 (126)
110 2fwh_A Thiol:disulfide interch 99.2 9.8E-12 3.4E-16 110.8 5.3 83 333-454 18-105 (134)
111 3fk8_A Disulphide isomerase; A 99.1 6.7E-11 2.3E-15 104.3 7.5 75 344-457 27-108 (133)
112 2ywm_A Glutaredoxin-like prote 99.1 2.1E-09 7.2E-14 103.4 15.2 171 344-569 19-198 (229)
113 3zzx_A Thioredoxin; oxidoreduc 99.0 4.7E-10 1.6E-14 97.3 8.0 69 344-456 18-88 (105)
114 2l5l_A Thioredoxin; structural 99.0 8.1E-10 2.8E-14 98.4 9.1 68 345-454 37-106 (136)
115 1a8l_A Protein disulfide oxido 99.0 6.6E-09 2.3E-13 99.4 15.5 170 343-566 19-198 (226)
116 4f82_A Thioredoxin reductase; 99.0 7.4E-10 2.5E-14 105.8 8.7 119 337-482 37-172 (176)
117 2kuc_A Putative disulphide-iso 99.0 3.9E-10 1.3E-14 98.6 6.1 79 338-456 19-102 (130)
118 3apo_A DNAJ homolog subfamily 99.0 2.5E-09 8.7E-14 121.3 14.2 167 341-566 450-623 (780)
119 3qfa_C Thioredoxin; protein-pr 99.0 6.8E-10 2.3E-14 96.4 7.1 69 344-456 29-99 (116)
120 3f3q_A Thioredoxin-1; His TAG, 99.0 1.1E-09 3.8E-14 93.9 8.3 68 345-456 23-92 (109)
121 2pu9_C TRX-F, thioredoxin F-ty 99.0 9.4E-10 3.2E-14 93.8 7.5 70 344-456 22-93 (111)
122 3gix_A Thioredoxin-like protei 98.9 8.7E-10 3E-14 100.9 7.0 67 345-454 22-90 (149)
123 1zma_A Bacterocin transport ac 98.9 2E-09 6.9E-14 93.0 8.3 73 345-456 28-102 (118)
124 4euy_A Uncharacterized protein 98.9 1.2E-09 4.3E-14 92.4 6.7 68 345-456 17-86 (105)
125 3d6i_A Monothiol glutaredoxin- 98.9 1.7E-09 5.7E-14 92.2 7.3 70 345-456 20-91 (112)
126 2voc_A Thioredoxin; electron t 98.9 1.4E-09 4.9E-14 93.3 6.8 69 345-456 16-86 (112)
127 1nsw_A Thioredoxin, TRX; therm 98.9 3.4E-09 1.2E-13 88.8 8.6 69 345-456 16-86 (105)
128 1sen_A Thioredoxin-like protei 98.9 2.8E-10 9.7E-15 105.6 2.1 77 339-456 39-119 (164)
129 1qgv_A Spliceosomal protein U5 98.9 1.9E-09 6.4E-14 97.9 7.4 69 345-456 22-92 (142)
130 3die_A Thioredoxin, TRX; elect 98.9 4E-09 1.4E-13 88.1 8.9 69 345-456 18-88 (106)
131 3qou_A Protein YBBN; thioredox 98.9 1.4E-09 4.8E-14 108.2 6.9 68 345-455 25-94 (287)
132 1gh2_A Thioredoxin-like protei 98.9 3.5E-09 1.2E-13 89.6 8.3 67 345-455 20-88 (107)
133 2lst_A Thioredoxin; structural 98.4 1.8E-10 6E-15 101.0 0.0 78 336-453 9-92 (130)
134 1x5e_A Thioredoxin domain cont 98.9 4.2E-09 1.4E-13 91.8 8.8 68 344-454 21-90 (126)
135 3d22_A TRXH4, thioredoxin H-ty 98.9 1.2E-09 4.2E-14 96.9 5.5 69 344-456 44-114 (139)
136 2trx_A Thioredoxin; electron t 98.9 4.2E-09 1.4E-13 88.7 8.4 69 345-456 19-89 (108)
137 1x5d_A Protein disulfide-isome 98.9 3.9E-09 1.3E-13 92.2 8.1 72 345-455 24-97 (133)
138 1t00_A Thioredoxin, TRX; redox 98.9 4.9E-09 1.7E-13 89.1 8.5 68 345-455 22-91 (112)
139 2dj3_A Protein disulfide-isome 98.9 2.4E-09 8.3E-14 93.9 6.8 79 335-453 13-94 (133)
140 1dby_A Chloroplast thioredoxin 98.9 5.8E-09 2E-13 87.7 8.9 69 345-456 18-88 (107)
141 1xfl_A Thioredoxin H1; AT3G510 98.9 5.3E-09 1.8E-13 92.1 8.9 68 345-456 37-106 (124)
142 2wz9_A Glutaredoxin-3; protein 98.9 4E-09 1.4E-13 96.1 8.3 68 345-456 31-100 (153)
143 3q6o_A Sulfhydryl oxidase 1; p 98.9 2.3E-08 7.8E-13 97.7 14.2 69 345-450 29-99 (244)
144 3emx_A Thioredoxin; structural 98.9 3E-09 1E-13 94.9 7.3 76 344-456 30-107 (135)
145 1w4v_A Thioredoxin, mitochondr 98.9 5.8E-09 2E-13 90.6 8.9 69 345-456 30-100 (119)
146 3cxg_A Putative thioredoxin; m 98.9 1.5E-09 5E-14 97.0 5.2 74 341-456 35-111 (133)
147 1faa_A Thioredoxin F; electron 98.9 3.6E-09 1.2E-13 91.9 7.2 70 344-456 35-106 (124)
148 3tco_A Thioredoxin (TRXA-1); d 98.9 8.6E-09 2.9E-13 86.3 9.2 70 344-456 19-90 (109)
149 3gnj_A Thioredoxin domain prot 98.8 7.2E-09 2.4E-13 87.5 8.7 68 345-455 21-90 (111)
150 2i4a_A Thioredoxin; acidophIle 98.8 1.1E-08 3.8E-13 85.5 9.6 69 345-456 19-89 (107)
151 3m9j_A Thioredoxin; oxidoreduc 98.8 5.7E-09 1.9E-13 87.3 7.5 69 344-456 18-88 (105)
152 2oe3_A Thioredoxin-3; electron 98.8 6.4E-09 2.2E-13 90.3 7.8 68 345-456 29-98 (114)
153 2dj1_A Protein disulfide-isome 98.8 3.4E-09 1.2E-13 93.8 6.0 70 345-454 33-104 (140)
154 3ph9_A Anterior gradient prote 98.8 2.4E-09 8.3E-14 99.4 5.2 95 345-483 43-139 (151)
155 1thx_A Thioredoxin, thioredoxi 98.8 8.9E-09 3.1E-13 87.3 8.3 69 345-456 24-94 (115)
156 2o8v_B Thioredoxin 1; disulfid 98.8 4.2E-09 1.4E-13 93.4 6.5 69 345-456 39-109 (128)
157 3p2a_A Thioredoxin 2, putative 98.8 8.1E-09 2.8E-13 92.8 8.3 70 344-456 53-124 (148)
158 1syr_A Thioredoxin; SGPP, stru 98.8 1.1E-08 3.7E-13 87.6 8.6 68 345-456 25-94 (112)
159 1xwb_A Thioredoxin; dimerizati 98.8 1.2E-08 4E-13 85.3 8.6 70 344-456 18-89 (106)
160 1ep7_A Thioredoxin CH1, H-type 98.8 7.9E-09 2.7E-13 87.6 7.6 68 346-456 24-93 (112)
161 2f51_A Thioredoxin; electron t 98.8 6.1E-09 2.1E-13 90.8 7.0 69 345-456 22-95 (118)
162 2vlu_A Thioredoxin, thioredoxi 98.8 9.1E-09 3.1E-13 88.8 8.0 67 345-455 33-101 (122)
163 2yzu_A Thioredoxin; redox prot 98.8 1.3E-08 4.6E-13 85.0 8.7 68 345-455 17-86 (109)
164 2ppt_A Thioredoxin-2; thiredox 98.8 1E-08 3.4E-13 94.3 8.6 69 345-456 63-133 (155)
165 3aps_A DNAJ homolog subfamily 98.8 6.6E-09 2.2E-13 89.8 6.9 67 345-453 20-88 (122)
166 2e0q_A Thioredoxin; electron t 98.8 1.4E-08 4.9E-13 83.8 8.4 68 345-456 15-84 (104)
167 2dj0_A Thioredoxin-related tra 98.8 6.1E-09 2.1E-13 92.6 6.2 70 345-456 25-102 (137)
168 3t58_A Sulfhydryl oxidase 1; o 98.8 2.9E-08 1E-12 109.0 12.8 72 346-454 30-106 (519)
169 2l6c_A Thioredoxin; oxidoreduc 98.8 9.7E-09 3.3E-13 88.1 7.1 69 344-456 17-87 (110)
170 1fb6_A Thioredoxin M; electron 98.8 2.1E-08 7.3E-13 83.5 8.7 69 345-456 17-87 (105)
171 3ira_A Conserved protein; meth 98.8 1.7E-08 5.8E-13 96.0 9.0 84 339-456 32-120 (173)
172 3uvt_A Thioredoxin domain-cont 98.8 1.5E-08 5E-13 85.4 7.7 72 345-456 20-93 (111)
173 3h79_A Thioredoxin-like protei 98.8 3E-08 1E-12 86.8 9.9 72 345-453 32-105 (127)
174 1r26_A Thioredoxin; redox-acti 98.8 1.5E-08 5E-13 89.8 7.8 67 345-455 36-104 (125)
175 2dml_A Protein disulfide-isome 98.8 1.1E-08 3.7E-13 89.4 6.8 66 345-452 34-101 (130)
176 3uem_A Protein disulfide-isome 98.7 1.1E-07 3.7E-12 97.8 14.9 169 346-566 135-327 (361)
177 2vim_A Thioredoxin, TRX; thior 98.7 2.1E-08 7.3E-13 83.4 7.9 69 344-456 17-87 (104)
178 3hz4_A Thioredoxin; NYSGXRC, P 98.7 1.7E-08 5.9E-13 90.4 7.7 68 345-455 23-92 (140)
179 2dbc_A PDCL2, unnamed protein 98.7 2.4E-08 8.2E-13 89.4 8.3 88 345-483 29-118 (135)
180 2xc2_A Thioredoxinn; oxidoredu 98.7 1.5E-08 5.2E-13 87.1 6.7 69 343-456 30-100 (117)
181 2vm1_A Thioredoxin, thioredoxi 98.7 2.6E-08 8.8E-13 85.0 7.7 68 345-456 27-96 (118)
182 1ti3_A Thioredoxin H, PTTRXH1; 98.7 2.5E-08 8.7E-13 84.3 7.6 68 345-456 25-94 (113)
183 2i1u_A Thioredoxin, TRX, MPT46 98.7 3.8E-08 1.3E-12 84.4 8.7 69 345-456 29-99 (121)
184 3ed3_A Protein disulfide-isome 98.7 8E-08 2.7E-12 97.9 12.6 67 345-451 34-102 (298)
185 3apq_A DNAJ homolog subfamily 98.7 1E-08 3.5E-13 98.1 5.7 69 344-455 112-182 (210)
186 1wou_A Thioredoxin -related pr 98.7 2.4E-08 8.1E-13 87.6 6.8 77 345-456 23-108 (123)
187 3dxb_A Thioredoxin N-terminall 98.7 2.3E-08 8E-13 96.7 6.7 68 345-455 29-98 (222)
188 2j23_A Thioredoxin; immune pro 98.6 1.7E-08 5.7E-13 88.1 4.7 70 345-456 32-103 (121)
189 2djj_A PDI, protein disulfide- 98.6 4.2E-08 1.4E-12 84.4 6.9 70 344-453 23-94 (121)
190 1v98_A Thioredoxin; oxidoreduc 98.6 9.7E-08 3.3E-12 85.0 9.4 68 345-455 49-118 (140)
191 2av4_A Thioredoxin-like protei 98.6 4.2E-08 1.4E-12 92.3 7.2 67 345-454 40-108 (160)
192 2qsi_A Putative hydrogenase ex 98.6 7E-08 2.4E-12 88.7 7.6 69 345-456 31-104 (137)
193 1a8l_A Protein disulfide oxido 98.6 1.7E-07 5.8E-12 89.6 9.7 72 345-455 133-206 (226)
194 1mek_A Protein disulfide isome 98.5 2.1E-08 7.3E-13 85.1 2.3 70 345-454 23-94 (120)
195 3idv_A Protein disulfide-isome 98.5 1.9E-07 6.6E-12 89.5 8.3 71 345-455 146-218 (241)
196 3apo_A DNAJ homolog subfamily 98.5 8.1E-07 2.8E-11 100.8 14.8 164 346-566 563-735 (780)
197 1oaz_A Thioredoxin 1; immune s 98.5 3E-08 1E-12 87.4 1.8 69 345-456 20-104 (123)
198 1nho_A Probable thioredoxin; b 98.5 6.7E-08 2.3E-12 77.7 3.7 61 348-453 3-65 (85)
199 1fo5_A Thioredoxin; disulfide 98.5 7.3E-08 2.5E-12 77.5 3.8 62 347-453 3-66 (85)
200 1a0r_P Phosducin, MEKA, PP33; 98.5 1.1E-07 3.9E-12 94.9 5.8 91 345-484 132-224 (245)
201 2hls_A Protein disulfide oxido 98.5 2.8E-06 9.6E-11 83.8 15.3 65 504-569 136-205 (243)
202 1ilo_A Conserved hypothetical 98.4 4.5E-07 1.6E-11 71.9 7.1 60 349-456 2-63 (77)
203 2qgv_A Hydrogenase-1 operon pr 98.4 1.3E-07 4.6E-12 87.1 4.4 69 345-456 33-106 (140)
204 3f8u_A Protein disulfide-isome 98.4 3.6E-07 1.2E-11 97.6 8.0 67 345-452 369-437 (481)
205 3evi_A Phosducin-like protein 98.4 7.1E-07 2.4E-11 79.2 8.4 87 346-483 23-111 (118)
206 2yj7_A LPBCA thioredoxin; oxid 97.7 3.9E-08 1.3E-12 81.5 0.0 68 345-455 18-87 (106)
207 3kp8_A Vkorc1/thioredoxin doma 98.4 1.1E-08 3.8E-13 88.9 -3.8 34 337-370 3-38 (106)
208 3dml_A Putative uncharacterize 98.3 4.8E-08 1.6E-12 87.3 -0.4 74 344-456 16-91 (116)
209 3iv4_A Putative oxidoreductase 98.3 1.5E-06 5.3E-11 77.2 9.2 70 346-456 24-96 (112)
210 1wmj_A Thioredoxin H-type; str 98.3 2.9E-08 9.8E-13 86.3 -2.0 68 345-456 35-104 (130)
211 2hls_A Protein disulfide oxido 98.3 1.3E-06 4.6E-11 86.1 8.9 71 343-454 135-207 (243)
212 2trc_P Phosducin, MEKA, PP33; 98.3 3.4E-07 1.2E-11 89.4 4.2 90 345-483 119-210 (217)
213 2r2j_A Thioredoxin domain-cont 98.3 6.9E-06 2.4E-10 85.7 13.3 74 345-455 21-96 (382)
214 1xiy_A Peroxiredoxin, pfaop; a 98.3 1.4E-06 4.7E-11 83.3 7.3 101 337-457 33-151 (182)
215 2es7_A Q8ZP25_salty, putative 98.2 7.6E-07 2.6E-11 81.3 4.7 67 346-456 34-106 (142)
216 3qcp_A QSOX from trypanosoma b 98.2 1.4E-06 4.7E-11 94.7 6.8 70 345-452 41-116 (470)
217 2xhf_A Peroxiredoxin 5; oxidor 98.2 2.6E-06 8.8E-11 80.8 7.1 102 337-457 32-149 (171)
218 3f8u_A Protein disulfide-isome 98.1 9E-06 3.1E-10 86.7 11.8 67 345-454 20-88 (481)
219 2ywm_A Glutaredoxin-like prote 98.1 3.7E-06 1.3E-10 80.6 7.9 63 345-453 135-199 (229)
220 3uem_A Protein disulfide-isome 98.1 3.9E-06 1.3E-10 86.1 8.0 64 345-450 266-331 (361)
221 3ga4_A Dolichyl-diphosphooligo 98.1 1.3E-05 4.3E-10 76.7 9.5 72 345-453 36-116 (178)
222 1eej_A Thiol:disulfide interch 98.1 1.9E-05 6.4E-10 76.3 10.9 98 340-453 80-192 (216)
223 2dlx_A UBX domain-containing p 98.1 8.5E-06 2.9E-10 75.8 8.0 71 345-455 41-117 (153)
224 1sji_A Calsequestrin 2, calseq 98.0 1.9E-05 6.6E-10 81.1 11.0 67 345-454 27-102 (350)
225 2b5e_A Protein disulfide-isome 98.0 1.4E-05 4.9E-10 85.9 9.8 59 505-566 375-437 (504)
226 2e7p_A Glutaredoxin; thioredox 98.0 7.9E-06 2.7E-10 70.0 5.6 69 345-456 18-86 (116)
227 2b5e_A Protein disulfide-isome 97.9 9.4E-06 3.2E-10 87.3 6.4 67 345-453 375-443 (504)
228 3gyk_A 27KDA outer membrane pr 97.9 8.1E-05 2.8E-09 68.4 11.2 35 339-373 15-51 (175)
229 3hd5_A Thiol:disulfide interch 97.6 0.00021 7.2E-09 67.0 9.7 41 344-391 23-65 (195)
230 1t3b_A Thiol:disulfide interch 97.5 0.0004 1.4E-08 66.8 10.6 92 345-452 85-191 (211)
231 2k8s_A Thioredoxin; dimer, str 97.5 6.7E-05 2.3E-09 60.7 4.3 62 350-455 4-67 (80)
232 1ego_A Glutaredoxin; electron 97.5 0.00013 4.5E-09 58.8 6.0 64 350-455 3-70 (85)
233 1v58_A Thiol:disulfide interch 97.5 0.00085 2.9E-08 65.9 12.6 105 339-453 90-212 (241)
234 3us3_A Calsequestrin-1; calciu 97.5 0.00023 7.7E-09 74.1 8.7 73 345-455 29-105 (367)
235 1i5g_A Tryparedoxin II; electr 97.4 0.00029 9.9E-09 62.0 6.8 57 503-559 25-84 (144)
236 1o73_A Tryparedoxin; electron 97.4 0.00045 1.5E-08 60.6 7.8 58 502-559 24-84 (144)
237 1o8x_A Tryparedoxin, TRYX, TXN 97.4 0.00031 1E-08 62.2 6.8 56 503-558 25-83 (146)
238 3h93_A Thiol:disulfide interch 97.4 0.00052 1.8E-08 64.1 8.8 40 345-391 24-65 (192)
239 1ttz_A Conserved hypothetical 97.2 0.00038 1.3E-08 58.5 5.8 16 350-365 3-18 (87)
240 3s9f_A Tryparedoxin; thioredox 97.2 0.00045 1.5E-08 63.3 6.6 63 499-561 41-106 (165)
241 2djk_A PDI, protein disulfide- 97.2 0.00028 9.7E-09 62.5 4.9 67 345-454 22-93 (133)
242 3die_A Thioredoxin, TRX; elect 97.2 0.00069 2.4E-08 55.9 6.8 64 505-569 18-84 (106)
243 2fgx_A Putative thioredoxin; N 97.2 0.00057 2E-08 59.9 6.4 35 348-391 30-66 (107)
244 2trx_A Thioredoxin; electron t 97.2 0.00086 2.9E-08 55.8 7.2 65 504-569 18-85 (108)
245 1z6n_A Hypothetical protein PA 97.2 0.00041 1.4E-08 65.0 5.6 62 504-566 52-116 (167)
246 2znm_A Thiol:disulfide interch 97.1 0.0013 4.5E-08 61.2 9.0 40 345-391 21-62 (195)
247 1dby_A Chloroplast thioredoxin 97.1 0.00085 2.9E-08 55.7 6.6 65 504-569 17-84 (107)
248 1t00_A Thioredoxin, TRX; redox 97.1 0.00073 2.5E-08 56.7 6.3 65 504-569 21-88 (112)
249 1xwb_A Thioredoxin; dimerizati 97.1 0.0011 3.6E-08 54.7 7.0 64 505-569 19-85 (106)
250 3ul3_B Thioredoxin, thioredoxi 97.1 0.00066 2.2E-08 59.1 6.0 67 502-569 38-107 (128)
251 2pu9_C TRX-F, thioredoxin F-ty 97.1 0.00082 2.8E-08 56.5 6.2 64 505-569 23-89 (111)
252 1z6m_A Conserved hypothetical 97.1 0.0068 2.3E-07 55.4 12.9 49 338-391 19-69 (175)
253 1nsw_A Thioredoxin, TRX; therm 97.1 0.00093 3.2E-08 55.2 6.3 66 503-569 14-82 (105)
254 2voc_A Thioredoxin; electron t 97.0 0.00069 2.4E-08 57.5 5.4 64 505-569 16-82 (112)
255 2l57_A Uncharacterized protein 97.0 0.00082 2.8E-08 58.0 5.9 66 503-569 23-94 (126)
256 1nho_A Probable thioredoxin; b 97.0 0.00063 2.2E-08 54.1 4.7 59 510-569 5-64 (85)
257 1fo5_A Thioredoxin; disulfide 97.0 0.00069 2.4E-08 53.8 4.8 60 509-569 5-65 (85)
258 1hyu_A AHPF, alkyl hydroperoxi 97.0 0.001 3.5E-08 72.4 7.6 67 344-456 115-183 (521)
259 2i4a_A Thioredoxin; acidophIle 97.0 0.0013 4.6E-08 54.2 6.7 65 504-569 18-85 (107)
260 1faa_A Thioredoxin F; electron 97.0 0.00087 3E-08 57.5 5.7 64 505-569 36-102 (124)
261 1w4v_A Thioredoxin, mitochondr 97.0 0.001 3.5E-08 57.1 6.1 65 504-569 29-96 (119)
262 3gnj_A Thioredoxin domain prot 97.0 0.001 3.6E-08 55.4 5.9 65 504-569 20-87 (111)
263 1fb6_A Thioredoxin M; electron 97.0 0.0012 4.1E-08 54.3 6.2 64 505-569 17-83 (105)
264 1thx_A Thioredoxin, thioredoxi 97.0 0.0013 4.3E-08 55.1 6.3 65 504-569 23-90 (115)
265 2yzu_A Thioredoxin; redox prot 97.0 0.0012 4.1E-08 54.4 6.1 65 504-569 16-83 (109)
266 2o8v_B Thioredoxin 1; disulfid 96.9 0.0014 4.8E-08 57.5 6.8 65 504-569 38-105 (128)
267 4fo5_A Thioredoxin-like protei 96.9 0.0011 3.6E-08 58.4 6.1 56 503-558 29-86 (143)
268 3f3q_A Thioredoxin-1; His TAG, 96.9 0.0011 3.9E-08 56.1 6.0 65 503-569 21-88 (109)
269 2rem_A Disulfide oxidoreductas 96.9 0.0032 1.1E-07 58.4 9.6 41 344-391 23-65 (193)
270 4euy_A Uncharacterized protein 96.9 0.0013 4.6E-08 54.9 6.2 62 503-566 15-77 (105)
271 2i1u_A Thioredoxin, TRX, MPT46 96.9 0.0013 4.4E-08 55.8 6.2 65 504-569 28-95 (121)
272 3tco_A Thioredoxin (TRXA-1); d 96.9 0.0011 3.8E-08 54.7 5.5 63 503-566 18-81 (109)
273 1ep7_A Thioredoxin CH1, H-type 96.9 0.0011 3.9E-08 55.4 5.5 63 506-569 24-89 (112)
274 1xfl_A Thioredoxin H1; AT3G510 96.9 0.0019 6.7E-08 56.2 7.0 64 504-569 36-102 (124)
275 1syr_A Thioredoxin; SGPP, stru 96.9 0.0015 5.1E-08 55.2 6.1 65 503-569 23-90 (112)
276 1ti3_A Thioredoxin H, PTTRXH1; 96.8 0.0019 6.7E-08 53.9 6.6 64 504-569 24-90 (113)
277 1wjk_A C330018D20RIK protein; 96.8 0.0012 4.2E-08 56.1 5.3 38 345-391 14-51 (100)
278 3qfa_C Thioredoxin; protein-pr 96.8 0.0019 6.4E-08 55.4 6.2 63 505-569 30-95 (116)
279 3m9j_A Thioredoxin; oxidoreduc 96.8 0.0021 7E-08 53.0 6.0 60 505-566 19-79 (105)
280 2ju5_A Thioredoxin disulfide i 96.8 0.0007 2.4E-08 61.4 3.4 64 503-566 44-122 (154)
281 2e0q_A Thioredoxin; electron t 96.8 0.0022 7.5E-08 52.2 6.1 64 504-569 14-80 (104)
282 1zma_A Bacterocin transport ac 96.7 0.0011 3.7E-08 56.7 4.2 62 503-566 26-93 (118)
283 3hxs_A Thioredoxin, TRXP; elec 96.7 0.0024 8.3E-08 55.9 6.7 63 503-566 48-111 (141)
284 2oe3_A Thioredoxin-3; electron 96.7 0.0019 6.4E-08 55.4 5.8 65 503-569 27-94 (114)
285 2vim_A Thioredoxin, TRX; thior 96.7 0.0022 7.4E-08 52.7 5.9 63 505-569 18-83 (104)
286 2lrt_A Uncharacterized protein 96.7 0.0025 8.5E-08 57.2 6.6 60 503-562 32-93 (152)
287 1zzo_A RV1677; thioredoxin fol 96.7 0.0033 1.1E-07 53.6 7.1 63 503-566 22-107 (136)
288 3d6i_A Monothiol glutaredoxin- 96.7 0.0018 6.3E-08 54.3 5.3 64 505-569 20-87 (112)
289 3fk8_A Disulphide isomerase; A 96.7 0.00088 3E-08 58.3 3.3 63 504-566 27-97 (133)
290 2l5l_A Thioredoxin; structural 96.7 0.003 1E-07 55.5 6.8 62 504-566 36-98 (136)
291 1lu4_A Soluble secreted antige 96.7 0.0037 1.3E-07 53.5 7.1 63 503-566 21-105 (136)
292 3hz4_A Thioredoxin; NYSGXRC, P 96.7 0.0017 5.9E-08 57.5 5.1 65 504-569 22-89 (140)
293 3or5_A Thiol:disulfide interch 96.7 0.0044 1.5E-07 55.1 7.8 54 503-556 31-86 (165)
294 2k8s_A Thioredoxin; dimer, str 96.7 0.0013 4.3E-08 53.0 3.8 61 509-569 4-64 (80)
295 3eur_A Uncharacterized protein 96.7 0.0042 1.4E-07 54.5 7.5 55 503-557 28-87 (142)
296 2lrn_A Thiol:disulfide interch 96.6 0.005 1.7E-07 54.6 8.0 47 503-549 26-74 (152)
297 2vlu_A Thioredoxin, thioredoxi 96.6 0.0025 8.6E-08 54.3 5.7 63 505-569 33-98 (122)
298 2lja_A Putative thiol-disulfid 96.6 0.004 1.4E-07 54.8 7.2 64 503-566 27-114 (152)
299 1gh2_A Thioredoxin-like protei 96.6 0.0029 9.9E-08 52.7 5.9 61 504-566 19-80 (107)
300 3erw_A Sporulation thiol-disul 96.6 0.0035 1.2E-07 54.2 6.5 62 505-566 33-120 (145)
301 2vm1_A Thioredoxin, thioredoxi 96.6 0.0024 8.1E-08 53.8 5.3 63 505-569 27-92 (118)
302 1ilo_A Conserved hypothetical 96.6 0.0025 8.6E-08 49.9 5.0 56 509-569 4-59 (77)
303 2b5x_A YKUV protein, TRXY; thi 96.6 0.0028 9.5E-08 55.0 5.7 64 503-566 26-116 (148)
304 3ewl_A Uncharacterized conserv 96.5 0.0037 1.3E-07 54.4 6.4 54 503-556 24-82 (142)
305 2dj1_A Protein disulfide-isome 96.5 0.0019 6.4E-08 56.5 4.3 66 503-569 31-102 (140)
306 1qgv_A Spliceosomal protein U5 96.5 0.0042 1.4E-07 55.8 6.7 61 505-566 22-83 (142)
307 2xc2_A Thioredoxinn; oxidoredu 96.5 0.0032 1.1E-07 53.5 5.6 62 505-569 32-96 (117)
308 4evm_A Thioredoxin family prot 96.5 0.007 2.4E-07 51.2 7.8 41 503-543 19-60 (138)
309 3gl3_A Putative thiol:disulfid 96.5 0.0046 1.6E-07 54.3 6.8 51 502-552 24-76 (152)
310 3raz_A Thioredoxin-related pro 96.5 0.0059 2E-07 54.1 7.4 46 503-548 21-68 (151)
311 3p2a_A Thioredoxin 2, putative 96.5 0.0037 1.3E-07 55.5 6.1 63 503-566 52-115 (148)
312 2l6c_A Thioredoxin; oxidoreduc 96.5 0.0037 1.3E-07 52.9 5.8 65 503-569 16-83 (110)
313 1wou_A Thioredoxin -related pr 96.5 0.0051 1.8E-07 53.3 6.7 62 505-566 23-98 (123)
314 2lst_A Thioredoxin; structural 95.4 0.00048 1.7E-08 59.6 0.0 65 502-566 15-84 (130)
315 3hdc_A Thioredoxin family prot 96.4 0.0092 3.2E-07 53.3 8.3 64 503-566 38-122 (158)
316 3aps_A DNAJ homolog subfamily 96.4 0.0047 1.6E-07 52.6 6.0 62 504-566 19-81 (122)
317 2j23_A Thioredoxin; immune pro 96.4 0.0021 7.2E-08 55.4 3.7 65 504-569 31-99 (121)
318 3uvt_A Thioredoxin domain-cont 96.4 0.0068 2.3E-07 50.2 6.7 63 506-569 21-89 (111)
319 1x5d_A Protein disulfide-isome 96.4 0.0039 1.3E-07 53.7 5.3 62 504-566 23-89 (133)
320 1r26_A Thioredoxin; redox-acti 96.3 0.0046 1.6E-07 54.1 5.6 64 504-569 35-101 (125)
321 1kte_A Thioltransferase; redox 96.3 0.007 2.4E-07 50.7 6.5 23 430-455 58-80 (105)
322 3kcm_A Thioredoxin family prot 96.3 0.012 4E-07 51.8 8.2 64 503-566 25-113 (154)
323 3fkf_A Thiol-disulfide oxidore 96.3 0.0058 2E-07 53.1 6.1 48 503-550 30-80 (148)
324 3ha9_A Uncharacterized thiored 96.3 0.0071 2.4E-07 54.2 6.8 43 503-546 34-77 (165)
325 2f9s_A Thiol-disulfide oxidore 96.3 0.0079 2.7E-07 53.0 7.0 63 503-565 23-108 (151)
326 3hcz_A Possible thiol-disulfid 96.3 0.0027 9.2E-08 55.2 3.8 54 503-556 28-83 (148)
327 2f51_A Thioredoxin; electron t 96.2 0.0061 2.1E-07 52.4 6.0 60 505-566 22-82 (118)
328 2dj3_A Protein disulfide-isome 96.2 0.0073 2.5E-07 52.2 6.4 61 505-566 24-87 (133)
329 3fw2_A Thiol-disulfide oxidore 96.2 0.0071 2.4E-07 53.5 6.5 55 503-557 30-89 (150)
330 3gix_A Thioredoxin-like protei 96.2 0.0086 3E-07 54.1 7.0 62 504-566 21-83 (149)
331 1h75_A Glutaredoxin-like prote 96.2 0.022 7.4E-07 45.3 8.6 16 350-365 3-18 (81)
332 1v98_A Thioredoxin; oxidoreduc 96.2 0.0098 3.4E-07 52.2 7.1 63 505-569 50-115 (140)
333 2kuc_A Putative disulphide-iso 96.2 0.0028 9.6E-08 54.6 3.4 63 504-566 25-92 (130)
334 2lus_A Thioredoxion; CR-Trp16, 95.2 0.00084 2.9E-08 58.4 0.0 53 504-556 23-80 (143)
335 2ppt_A Thioredoxin-2; thiredox 96.2 0.0063 2.1E-07 55.3 5.8 65 504-569 62-129 (155)
336 2wz9_A Glutaredoxin-3; protein 96.1 0.0068 2.3E-07 54.5 6.0 62 506-569 32-96 (153)
337 2hze_A Glutaredoxin-1; thiored 96.1 0.0068 2.3E-07 52.3 5.7 24 429-455 64-87 (114)
338 2djj_A PDI, protein disulfide- 96.1 0.0059 2E-07 51.7 5.3 59 504-566 23-87 (121)
339 3zzx_A Thioredoxin; oxidoreduc 96.1 0.011 3.9E-07 50.5 7.0 60 505-566 19-79 (105)
340 1x5e_A Thioredoxin domain cont 96.1 0.0069 2.4E-07 52.0 5.5 62 503-566 20-83 (126)
341 3d22_A TRXH4, thioredoxin H-ty 96.1 0.0062 2.1E-07 53.3 5.2 61 504-566 44-105 (139)
342 3q6o_A Sulfhydryl oxidase 1; p 96.1 0.0085 2.9E-07 58.0 6.6 63 504-566 28-95 (244)
343 1mek_A Protein disulfide isome 96.0 0.0035 1.2E-07 52.5 3.3 66 503-569 21-92 (120)
344 2dml_A Protein disulfide-isome 96.0 0.0066 2.3E-07 52.2 4.9 62 504-566 33-95 (130)
345 3dxb_A Thioredoxin N-terminall 96.0 0.0098 3.3E-07 57.0 6.6 62 504-566 28-90 (222)
346 3lwa_A Secreted thiol-disulfid 96.0 0.008 2.8E-07 55.0 5.6 54 503-556 56-118 (183)
347 3cxg_A Putative thioredoxin; m 95.9 0.0064 2.2E-07 53.6 4.7 63 504-569 38-105 (133)
348 3kh7_A Thiol:disulfide interch 95.9 0.0091 3.1E-07 54.9 5.7 58 499-559 51-109 (176)
349 3c1r_A Glutaredoxin-1; oxidize 95.9 0.0099 3.4E-07 52.0 5.6 68 350-455 27-94 (118)
350 3eyt_A Uncharacterized protein 95.9 0.013 4.4E-07 51.9 6.5 44 503-546 25-71 (158)
351 3qou_A Protein YBBN; thioredox 95.9 0.005 1.7E-07 60.7 4.0 61 505-566 25-86 (287)
352 2ht9_A Glutaredoxin-2; thiored 95.9 0.021 7.3E-07 52.1 8.0 23 430-455 92-114 (146)
353 2av4_A Thioredoxin-like protei 95.8 0.014 4.7E-07 54.8 6.7 60 505-565 40-100 (160)
354 2h30_A Thioredoxin, peptide me 95.8 0.013 4.6E-07 52.0 6.3 45 502-546 34-80 (164)
355 2b1k_A Thiol:disulfide interch 95.8 0.0069 2.4E-07 54.5 4.2 46 504-552 49-95 (168)
356 3gv1_A Disulfide interchange p 95.8 0.017 5.7E-07 52.9 6.8 94 343-453 11-120 (147)
357 1wmj_A Thioredoxin H-type; str 95.7 0.0039 1.3E-07 53.5 2.3 64 504-569 34-100 (130)
358 3apq_A DNAJ homolog subfamily 95.7 0.014 4.9E-07 55.2 6.5 65 504-569 112-179 (210)
359 2fwh_A Thiol:disulfide interch 95.7 0.0084 2.9E-07 52.6 4.5 61 505-566 30-97 (134)
360 1jfu_A Thiol:disulfide interch 95.7 0.017 6E-07 52.8 6.9 55 503-557 57-114 (186)
361 2yj7_A LPBCA thioredoxin; oxid 94.7 0.0017 5.9E-08 53.0 0.0 65 504-569 17-84 (106)
362 2l5o_A Putative thioredoxin; s 95.7 0.018 6.2E-07 50.5 6.7 64 503-566 25-112 (153)
363 2qc7_A ERP31, ERP28, endoplasm 95.7 0.021 7.3E-07 56.5 7.8 68 345-452 21-94 (240)
364 3kij_A Probable glutathione pe 95.7 0.018 6.3E-07 52.9 6.9 57 502-558 34-99 (180)
365 1kng_A Thiol:disulfide interch 95.7 0.0088 3E-07 52.6 4.5 49 503-553 39-88 (156)
366 3f9u_A Putative exported cytoc 95.6 0.0068 2.3E-07 55.2 3.5 61 503-566 44-136 (172)
367 2c0g_A ERP29 homolog, windbeut 95.6 0.035 1.2E-06 55.3 8.7 70 345-452 32-105 (248)
368 2cq9_A GLRX2 protein, glutared 95.5 0.027 9.3E-07 49.9 7.2 23 430-455 70-92 (130)
369 3dwv_A Glutathione peroxidase- 95.5 0.016 5.3E-07 53.9 5.8 55 503-557 43-106 (187)
370 3kp9_A Vkorc1/thioredoxin doma 95.5 0.0066 2.2E-07 62.1 3.5 34 338-373 189-222 (291)
371 3lor_A Thiol-disulfide isomera 95.5 0.017 5.8E-07 51.1 5.7 43 503-545 27-72 (160)
372 2ggt_A SCO1 protein homolog, m 95.5 0.014 4.8E-07 51.8 5.2 55 503-557 20-84 (164)
373 1oaz_A Thioredoxin 1; immune s 95.5 0.0064 2.2E-07 52.9 2.8 65 504-569 19-100 (123)
374 1sen_A Thioredoxin-like protei 95.4 0.0021 7.2E-08 59.1 -0.5 64 503-566 43-109 (164)
375 2ls5_A Uncharacterized protein 94.4 0.0026 8.8E-08 56.8 0.0 55 503-557 30-88 (159)
376 2p5q_A Glutathione peroxidase 95.3 0.026 8.8E-07 50.4 6.3 55 503-557 29-92 (170)
377 2dbc_A PDCL2, unnamed protein 95.3 0.033 1.1E-06 49.1 6.9 57 505-566 29-86 (135)
378 3msz_A Glutaredoxin 1; alpha-b 95.3 0.077 2.6E-06 42.5 8.5 33 350-391 6-38 (89)
379 2rli_A SCO2 protein homolog, m 95.3 0.022 7.7E-07 51.0 5.7 45 503-547 23-74 (171)
380 2p31_A CL683, glutathione pero 95.2 0.027 9.2E-07 51.9 6.3 55 503-557 46-109 (181)
381 1r7h_A NRDH-redoxin; thioredox 95.2 0.062 2.1E-06 41.6 7.5 16 350-365 3-18 (75)
382 2dj0_A Thioredoxin-related tra 95.2 0.014 4.7E-07 51.2 4.1 61 505-566 25-93 (137)
383 2qsi_A Putative hydrogenase ex 95.2 0.021 7.1E-07 52.2 5.3 63 503-566 29-95 (137)
384 2vup_A Glutathione peroxidase- 95.2 0.021 7.3E-07 53.0 5.5 45 503-547 45-91 (190)
385 3h79_A Thioredoxin-like protei 95.2 0.042 1.4E-06 47.3 7.0 61 505-566 32-98 (127)
386 3cmi_A Peroxiredoxin HYR1; thi 95.1 0.029 9.7E-07 50.9 6.0 43 503-546 29-73 (171)
387 2obi_A PHGPX, GPX-4, phospholi 95.1 0.035 1.2E-06 51.0 6.7 55 503-557 44-107 (183)
388 1xvw_A Hypothetical protein RV 95.1 0.054 1.8E-06 48.1 7.6 45 503-547 32-80 (160)
389 3kp8_A Vkorc1/thioredoxin doma 95.0 0.0056 1.9E-07 52.6 1.0 60 506-569 12-75 (106)
390 2cvb_A Probable thiol-disulfid 95.0 0.038 1.3E-06 50.7 6.7 44 503-546 30-74 (188)
391 3drn_A Peroxiredoxin, bacterio 95.0 0.024 8.4E-07 51.0 5.2 54 503-557 25-82 (161)
392 2e7p_A Glutaredoxin; thioredox 95.0 0.024 8.1E-07 48.0 4.8 61 505-569 18-82 (116)
393 2k6v_A Putative cytochrome C o 95.0 0.044 1.5E-06 49.0 6.8 55 503-557 32-95 (172)
394 1un2_A DSBA, thiol-disulfide i 94.9 0.0085 2.9E-07 57.3 2.0 41 344-391 111-156 (197)
395 3ed3_A Protein disulfide-isome 94.9 0.032 1.1E-06 56.4 6.2 62 505-566 34-97 (298)
396 3hz8_A Thiol:disulfide interch 94.9 0.027 9.1E-07 53.1 5.2 40 345-391 23-64 (193)
397 2yan_A Glutaredoxin-3; oxidore 94.9 0.059 2E-06 45.6 7.0 22 431-455 63-84 (105)
398 3ic4_A Glutaredoxin (GRX-1); s 94.9 0.069 2.4E-06 43.5 7.1 21 431-454 58-78 (92)
399 3u5r_E Uncharacterized protein 94.8 0.034 1.2E-06 53.1 5.9 44 503-546 55-101 (218)
400 3nzn_A Glutaredoxin; structura 94.8 0.061 2.1E-06 45.4 6.9 16 350-365 24-39 (103)
401 1xzo_A BSSCO, hypothetical pro 94.7 0.029 1E-06 50.3 4.8 60 503-562 30-97 (174)
402 2v1m_A Glutathione peroxidase; 94.5 0.054 1.9E-06 48.2 6.2 45 503-547 28-74 (169)
403 2klx_A Glutaredoxin; thioredox 94.5 0.087 3E-06 42.8 6.8 16 350-365 8-23 (89)
404 1fov_A Glutaredoxin 3, GRX3; a 94.4 0.12 4.1E-06 40.7 7.4 16 350-365 3-18 (82)
405 1ego_A Glutaredoxin; electron 94.3 0.033 1.1E-06 44.4 3.9 61 509-569 3-67 (85)
406 3ira_A Conserved protein; meth 94.3 0.014 4.9E-07 55.1 1.8 64 503-566 36-110 (173)
407 3emx_A Thioredoxin; structural 94.1 0.049 1.7E-06 47.7 4.9 57 508-566 33-98 (135)
408 2gs3_A PHGPX, GPX-4, phospholi 94.1 0.076 2.6E-06 49.0 6.4 55 503-557 46-109 (185)
409 3rhb_A ATGRXC5, glutaredoxin-C 94.1 0.12 4E-06 44.1 7.1 23 430-455 63-85 (113)
410 2ywi_A Hypothetical conserved 94.1 0.043 1.5E-06 50.5 4.7 43 504-546 43-88 (196)
411 2jsy_A Probable thiol peroxida 94.0 0.068 2.3E-06 48.0 5.7 57 503-561 41-99 (167)
412 1fov_A Glutaredoxin 3, GRX3; a 94.0 0.044 1.5E-06 43.3 4.0 57 509-569 3-60 (82)
413 3t58_A Sulfhydryl oxidase 1; o 93.9 0.061 2.1E-06 58.9 6.1 63 504-566 28-95 (519)
414 2khp_A Glutaredoxin; thioredox 93.8 0.17 5.9E-06 41.0 7.4 16 350-365 8-23 (92)
415 3gkn_A Bacterioferritin comigr 93.8 0.061 2.1E-06 48.0 5.0 56 503-559 32-90 (163)
416 2bmx_A Alkyl hydroperoxidase C 93.8 0.076 2.6E-06 49.4 5.8 46 503-548 42-90 (195)
417 3ia1_A THIO-disulfide isomeras 93.7 0.086 2.9E-06 46.2 5.6 37 507-545 31-68 (154)
418 2djk_A PDI, protein disulfide- 93.6 0.12 4.2E-06 45.3 6.4 61 505-566 22-84 (133)
419 2trc_P Phosducin, MEKA, PP33; 93.5 0.076 2.6E-06 51.4 5.3 59 505-566 119-178 (217)
420 3ph9_A Anterior gradient prote 93.4 0.059 2E-06 49.5 4.2 62 503-566 41-106 (151)
421 3gyk_A 27KDA outer membrane pr 93.4 0.098 3.4E-06 47.5 5.7 53 490-544 8-62 (175)
422 3ic4_A Glutaredoxin (GRX-1); s 93.2 0.07 2.4E-06 43.5 3.9 59 507-569 12-76 (92)
423 2b7k_A SCO1 protein; metalloch 93.1 0.12 4.1E-06 48.5 6.0 58 503-560 38-104 (200)
424 1r7h_A NRDH-redoxin; thioredox 93.1 0.074 2.5E-06 41.1 3.8 56 509-569 3-59 (75)
425 2dlx_A UBX domain-containing p 93.1 0.061 2.1E-06 49.6 3.7 64 503-566 39-107 (153)
426 3qmx_A Glutaredoxin A, glutare 93.0 0.34 1.1E-05 41.0 8.1 16 350-365 18-33 (99)
427 4hde_A SCO1/SENC family lipopr 93.0 0.12 4.2E-06 47.4 5.7 61 499-559 25-93 (170)
428 3me7_A Putative uncharacterize 92.9 0.1 3.6E-06 47.6 5.1 59 503-561 25-90 (170)
429 1wjk_A C330018D20RIK protein; 92.9 0.086 2.9E-06 44.5 4.1 62 504-569 14-75 (100)
430 1we0_A Alkyl hydroperoxide red 92.7 0.09 3.1E-06 48.4 4.4 46 503-548 28-76 (187)
431 2yzh_A Probable thiol peroxida 92.7 0.18 6.2E-06 45.6 6.4 57 503-561 44-102 (171)
432 1zof_A Alkyl hydroperoxide-red 92.7 0.071 2.4E-06 49.7 3.7 51 505-556 32-85 (198)
433 2hyx_A Protein DIPZ; thioredox 92.7 0.15 5.1E-06 53.1 6.5 44 503-546 79-124 (352)
434 2f8a_A Glutathione peroxidase 92.6 0.2 6.9E-06 47.7 6.8 55 503-557 44-107 (208)
435 3zrd_A Thiol peroxidase; oxido 92.6 0.21 7E-06 47.3 6.8 57 503-561 75-133 (200)
436 3msz_A Glutaredoxin 1; alpha-b 92.6 0.09 3.1E-06 42.0 3.7 57 509-569 6-70 (89)
437 2i81_A 2-Cys peroxiredoxin; st 92.6 0.14 4.8E-06 48.9 5.6 52 505-557 51-105 (213)
438 3evi_A Phosducin-like protein 92.5 0.19 6.5E-06 44.0 6.0 56 506-566 23-79 (118)
439 3ztl_A Thioredoxin peroxidase; 92.5 0.16 5.4E-06 48.7 5.9 47 503-549 66-115 (222)
440 1uul_A Tryparedoxin peroxidase 92.3 0.18 6E-06 47.2 5.9 46 503-548 33-81 (202)
441 3l9v_A Putative thiol-disulfid 92.2 0.068 2.3E-06 50.1 2.9 40 345-391 13-57 (189)
442 2lqo_A Putative glutaredoxin R 92.2 0.52 1.8E-05 39.7 8.1 15 351-365 7-21 (92)
443 2es7_A Q8ZP25_salty, putative 92.2 0.057 1.9E-06 48.8 2.2 57 508-566 36-97 (142)
444 3ixr_A Bacterioferritin comigr 92.1 0.19 6.5E-06 46.3 5.8 55 503-558 48-105 (179)
445 3ctg_A Glutaredoxin-2; reduced 92.1 0.22 7.4E-06 44.3 5.9 22 430-454 84-105 (129)
446 2h01_A 2-Cys peroxiredoxin; th 92.0 0.11 3.9E-06 48.0 4.1 44 505-548 30-76 (192)
447 1kte_A Thioltransferase; redox 92.0 0.11 3.7E-06 43.3 3.6 58 508-569 13-77 (105)
448 1qmv_A Human thioredoxin perox 91.9 0.19 6.5E-06 46.7 5.6 46 503-548 31-79 (197)
449 2klx_A Glutaredoxin; thioredox 91.9 0.09 3.1E-06 42.7 3.0 56 509-569 8-64 (89)
450 1xvq_A Thiol peroxidase; thior 91.9 0.17 5.7E-06 46.3 5.1 56 503-561 41-98 (175)
451 1h75_A Glutaredoxin-like prote 91.8 0.13 4.5E-06 40.6 3.7 56 509-569 3-59 (81)
452 1psq_A Probable thiol peroxida 91.6 0.3 1E-05 43.8 6.4 56 503-560 39-96 (163)
453 3p7x_A Probable thiol peroxida 91.5 0.19 6.6E-06 45.3 5.0 56 503-561 43-100 (166)
454 3h8q_A Thioredoxin reductase 3 91.5 0.56 1.9E-05 40.2 7.7 22 431-455 61-82 (114)
455 1q98_A Thiol peroxidase, TPX; 91.4 0.37 1.3E-05 43.5 6.8 57 503-561 40-98 (165)
456 2pn8_A Peroxiredoxin-4; thiore 91.4 0.28 9.6E-06 46.7 6.3 54 503-557 45-101 (211)
457 1a0r_P Phosducin, MEKA, PP33; 91.4 0.17 5.7E-06 50.2 4.8 59 505-566 132-191 (245)
458 2khp_A Glutaredoxin; thioredox 91.4 0.14 4.8E-06 41.6 3.6 58 508-569 7-65 (92)
459 3dml_A Putative uncharacterize 91.3 0.059 2E-06 47.8 1.3 60 507-566 19-82 (116)
460 2qgv_A Hydrogenase-1 operon pr 91.1 0.1 3.4E-06 47.8 2.7 62 504-566 32-97 (140)
461 2hze_A Glutaredoxin-1; thiored 91.1 0.096 3.3E-06 45.0 2.4 59 507-569 19-84 (114)
462 2c0d_A Thioredoxin peroxidase 90.9 0.19 6.5E-06 48.5 4.6 52 505-557 55-109 (221)
463 2a4v_A Peroxiredoxin DOT5; yea 90.9 0.25 8.5E-06 44.0 5.0 53 504-558 31-88 (159)
464 1zye_A Thioredoxin-dependent p 90.8 0.27 9.1E-06 47.1 5.5 46 503-548 53-101 (220)
465 1n8j_A AHPC, alkyl hydroperoxi 90.6 0.27 9.1E-06 45.6 5.2 54 503-557 27-83 (186)
466 2ec4_A FAS-associated factor 1 90.6 0.91 3.1E-05 42.8 8.9 85 343-451 52-141 (178)
467 3tdg_A DSBG, putative uncharac 90.6 0.42 1.4E-05 48.4 6.9 38 345-391 146-185 (273)
468 3c1r_A Glutaredoxin-1; oxidize 90.3 0.29 1E-05 42.5 4.9 58 509-569 27-91 (118)
469 3ga4_A Dolichyl-diphosphooligo 90.0 0.4 1.4E-05 45.4 5.9 60 506-566 37-109 (178)
470 2cq9_A GLRX2 protein, glutared 90.0 0.34 1.1E-05 42.8 5.1 57 509-569 29-89 (130)
471 2fgx_A Putative thioredoxin; N 89.7 0.44 1.5E-05 41.4 5.4 59 507-569 30-90 (107)
472 3qmx_A Glutaredoxin A, glutare 89.4 0.35 1.2E-05 40.9 4.5 61 505-569 14-76 (99)
473 3nzn_A Glutaredoxin; structura 89.4 0.5 1.7E-05 39.6 5.4 58 507-568 22-85 (103)
474 3ctg_A Glutaredoxin-2; reduced 89.2 0.4 1.4E-05 42.5 4.9 58 509-569 39-103 (129)
475 1aba_A Glutaredoxin; electron 89.1 0.51 1.7E-05 38.3 5.1 57 509-569 2-74 (87)
476 1hyu_A AHPF, alkyl hydroperoxi 89.1 0.57 2E-05 50.6 7.0 63 505-569 116-179 (521)
477 2r2j_A Thioredoxin domain-cont 88.9 0.44 1.5E-05 49.2 5.7 63 503-566 19-88 (382)
478 2ht9_A Glutaredoxin-2; thiored 88.7 0.47 1.6E-05 43.0 5.1 58 508-569 50-111 (146)
479 2ct6_A SH3 domain-binding glut 88.4 0.52 1.8E-05 40.5 4.9 62 508-569 9-81 (111)
480 1wik_A Thioredoxin-like protei 88.3 0.57 2E-05 39.8 5.1 62 503-569 12-79 (109)
481 3qcp_A QSOX from trypanosoma b 88.0 0.54 1.8E-05 51.0 5.8 61 505-566 41-110 (470)
482 2lqo_A Putative glutaredoxin R 87.9 0.45 1.5E-05 40.1 4.1 58 508-569 5-65 (92)
483 2wfc_A Peroxiredoxin 5, PRDX5; 87.8 0.46 1.6E-05 43.6 4.5 57 505-562 30-91 (167)
484 3qpm_A Peroxiredoxin; oxidored 87.1 1.2 4.1E-05 43.3 7.3 48 503-550 74-124 (240)
485 1t1v_A SH3BGRL3, SH3 domain-bi 86.7 0.67 2.3E-05 38.1 4.5 61 509-569 4-69 (93)
486 2yan_A Glutaredoxin-3; oxidore 86.7 0.59 2E-05 39.3 4.2 60 505-569 16-81 (105)
487 3feu_A Putative lipoprotein; a 86.7 0.35 1.2E-05 45.1 3.0 37 346-391 22-60 (185)
488 1tp9_A Peroxiredoxin, PRX D (t 85.9 0.58 2E-05 42.2 4.0 57 504-561 33-94 (162)
489 3rhb_A ATGRXC5, glutaredoxin-C 85.8 0.46 1.6E-05 40.3 3.1 57 509-569 21-82 (113)
490 1un2_A DSBA, thiol-disulfide i 85.2 1.7 5.8E-05 41.2 7.0 52 493-544 100-157 (197)
491 1t3b_A Thiol:disulfide interch 85.2 0.77 2.6E-05 43.7 4.7 38 505-543 85-123 (211)
492 3kp9_A Vkorc1/thioredoxin doma 84.9 0.52 1.8E-05 48.0 3.5 55 511-569 202-260 (291)
493 2i3y_A Epididymal secretory gl 84.6 1.4 4.6E-05 42.5 6.1 55 502-557 52-115 (215)
494 3l9s_A Thiol:disulfide interch 84.3 0.74 2.5E-05 43.2 4.0 41 344-391 19-64 (191)
495 1eej_A Thiol:disulfide interch 83.9 0.8 2.7E-05 43.6 4.1 37 504-541 84-121 (216)
496 3hd5_A Thiol:disulfide interch 83.8 2.1 7.2E-05 39.4 6.9 43 504-546 23-66 (195)
497 4hoj_A REGF protein; GST, glut 82.9 1.2 3.9E-05 41.4 4.7 57 509-569 4-60 (210)
498 3h8q_A Thioredoxin reductase 3 82.7 1.2 4.2E-05 38.1 4.5 59 507-569 17-79 (114)
499 4g2e_A Peroxiredoxin; redox pr 80.8 0.48 1.6E-05 42.6 1.2 54 503-557 27-83 (157)
500 4f9z_D Endoplasmic reticulum r 80.8 14 0.00049 34.9 11.7 151 398-566 38-195 (227)
No 1
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.86 E-value=3.8e-21 Score=178.59 Aligned_cols=128 Identities=17% Similarity=0.346 Sum_probs=108.9
Q ss_pred cccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHH
Q 008311 330 LVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFE 407 (570)
Q Consensus 330 l~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~ 407 (570)
.+.+.+| .+++++++||+|+|+|||+||+||+.++ |.++|+++++ ..+++||+|++ |.+.+.++
T Consensus 33 ~l~~~~g-~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~-----~~~v~vv~v~~--------d~~~~~~~ 98 (165)
T 3s9f_A 33 KLRKQAD-TADMDSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHD-----SKNFEIILASW--------DEEEDDFN 98 (165)
T ss_dssp CEEETTE-EECSGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-----TTTEEEEEEEC--------CCSHHHHH
T ss_pred eeecCCC-cccHHHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhcc-----CCCeEEEEEec--------CCCHHHHH
Confidence 4567788 9999999999999999999999999999 9999999963 24799999996 34556778
Q ss_pred HHHcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEECCC-CcEEccccchhHhhhc-CCCCCCCc
Q 008311 408 TLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQ-GRVVSPNALHMMWIWG-SNAFPFTS 474 (570)
Q Consensus 408 ~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpq-GkVv~~na~~~I~~~G-~~aFPFt~ 474 (570)
++..+++|..+++. .......+.+.|++.++|+++|+|++ |+|+.++++..+.... .+.|||..
T Consensus 99 ~~~~~~~~~~~~~~---~~~~~~~l~~~~~v~~~Pt~~lid~~~G~iv~~~~~~~~~~d~~~~~fpw~~ 164 (165)
T 3s9f_A 99 AYYAKMPWLSIPFA---NRNIVEALTKKYSVESIPTLIGLNADTGDTVTTRARHALTQDPMGEQFPWRD 164 (165)
T ss_dssp HHHTTCSSEECCTT---CHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTCCC
T ss_pred HHHHhCCCcccccC---chhHHHHHHHHcCCCCCCEEEEEeCCCCEEEecccHHHHhhCcccccCCCCC
Confidence 88889999888774 22334688999999999999999998 9999999999998755 67899974
No 2
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.85 E-value=7.1e-21 Score=170.40 Aligned_cols=129 Identities=19% Similarity=0.324 Sum_probs=109.7
Q ss_pred cccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHH
Q 008311 330 LVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFE 407 (570)
Q Consensus 330 l~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~ 407 (570)
.+.+.+|+.+++++++||+|+|+|||+||++|+.++ |.++|+++++ ..+++||+|++ |.+.+.++
T Consensus 12 ~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~-----~~~~~vv~v~~--------d~~~~~~~ 78 (144)
T 1i5g_A 12 NVLKGAAADIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAE-----KKNFEVMLISW--------DESAEDFK 78 (144)
T ss_dssp EEEETTEEEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-----TTTEEEEEEEC--------CSSHHHHH
T ss_pred EEEcCCCCEecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcc-----CCCEEEEEEeC--------CCCHHHHH
Confidence 466789999999999999999999999999999999 9999999962 24799999996 33456677
Q ss_pred HHHcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEEC-CCCcEEccccchhHhhhc-CCCCCCCc
Q 008311 408 TLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLD-PQGRVVSPNALHMMWIWG-SNAFPFTS 474 (570)
Q Consensus 408 ~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLD-pqGkVv~~na~~~I~~~G-~~aFPFt~ 474 (570)
++..+++|..+++. . .+....+.+.|++.++|+++++| ++|+++..++...+...+ ...|||++
T Consensus 79 ~~~~~~~~~~~~~~--~-~d~~~~~~~~~~v~~~P~~~lid~~~G~i~~~~~~~~~~~~~~~~~~~w~~ 144 (144)
T 1i5g_A 79 DYYAKMPWLALPFE--D-RKGMEFLTTGFDVKSIPTLVGVEADSGNIITTQARTMVVKDPEAKDFPWPN 144 (144)
T ss_dssp HHHTTCSSEECCTT--C-HHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTCCC
T ss_pred HHHHhCCccccccC--c-hHHHHHHHHHcCCCCCCEEEEEECCCCcEEeccchhhhhhCcccccCCCCC
Confidence 88888999887763 2 12346789999999999999999 999999999999998877 47799964
No 3
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.84 E-value=1.8e-20 Score=168.51 Aligned_cols=129 Identities=19% Similarity=0.304 Sum_probs=109.1
Q ss_pred cccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHH
Q 008311 330 LVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFE 407 (570)
Q Consensus 330 l~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~ 407 (570)
.+.+.+| .+++++++||+|+|+|||+||++|+.++ |.++|+++++ +.+++|++|++ |.+.+.++
T Consensus 13 ~l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~-----~~~~~vv~v~~--------d~~~~~~~ 78 (146)
T 1o8x_A 13 KLRRGDG-EVEVKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHE-----SKNFEVVFCTW--------DEEEDGFA 78 (146)
T ss_dssp EEEETTE-EEEGGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-----TTTEEEEEEEC--------CCSHHHHH
T ss_pred EEEcCCC-CCcHHHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhh-----cCCeEEEEEeC--------CCCHHHHH
Confidence 4667899 9999999999999999999999999999 9999999962 24799999996 33456778
Q ss_pred HHHcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEEC-CCCcEEccccchhHhhhc-CCCCCCCch
Q 008311 408 TLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLD-PQGRVVSPNALHMMWIWG-SNAFPFTSL 475 (570)
Q Consensus 408 ~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLD-pqGkVv~~na~~~I~~~G-~~aFPFt~~ 475 (570)
++..+++|..+++. ..+....+.+.|++.++|+++++| ++|+++.+++...+.+.+ ...|||++.
T Consensus 79 ~~~~~~~~~~~~~~---~~d~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~~~~~~~~~~~~~~~~w~~~ 145 (146)
T 1o8x_A 79 GYFAKMPWLAVPFA---QSEAVQKLSKHFNVESIPTLIGVDADSGDVVTTRARATLVKDPEGEQFPWKDA 145 (146)
T ss_dssp HHHTTCSSEECCGG---GHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHTTCTTCTTTTCCCC
T ss_pred HHHHHCCceeeccc---hhhHHHHHHHHhCCCCCCEEEEEECCCCeEEEecchhHHhhCCccccCCCCCC
Confidence 88888999887763 212346789999999999999999 999999999999888766 578999864
No 4
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.84 E-value=2.6e-20 Score=166.11 Aligned_cols=128 Identities=19% Similarity=0.326 Sum_probs=108.4
Q ss_pred cccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHH
Q 008311 330 LVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFE 407 (570)
Q Consensus 330 l~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~ 407 (570)
.+.+.+| .+++++++||+|+|+|||+||++|+.++ |.++|+++++ ..+++|++|++ |.+.+.++
T Consensus 13 ~l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~-----~~~~~vv~i~~--------d~~~~~~~ 78 (144)
T 1o73_A 13 NLLSKSG-EVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHV-----AKNFEVVLISW--------DENESDFH 78 (144)
T ss_dssp CBBCTTS-CBCSGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-----TTTEEEEEEEC--------CSSHHHHH
T ss_pred EeecCCC-cCcHHHhCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhcc-----CCCEEEEEEeC--------CCCHHHHH
Confidence 4667899 9999999999999999999999999999 9999999962 24799999996 33456777
Q ss_pred HHHcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEEC-CCCcEEccccchhHhhhc-CCCCCCCc
Q 008311 408 TLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLD-PQGRVVSPNALHMMWIWG-SNAFPFTS 474 (570)
Q Consensus 408 ~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLD-pqGkVv~~na~~~I~~~G-~~aFPFt~ 474 (570)
++..+++|..+++. .......+.+.|++.++|+++++| ++|+++...+...+...+ ...|||.+
T Consensus 79 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~~~~~~~~~~~~~~~~W~~ 144 (144)
T 1o73_A 79 DYYGKMPWLALPFD---QRSTVSELGKTFGVESIPTLITINADTGAIIGTQARTRVIEDPDGANFPWPN 144 (144)
T ss_dssp HHHTTCSSEECCTT---CHHHHHHHHHHHTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTCCC
T ss_pred HHHHhCCceEeecc---chhHHHHHHHHcCCCCCCEEEEEECCCCeEEecchhhHHhhCCCccCCCCCC
Confidence 88888999888763 222346788999999999999999 899999999999998866 47799963
No 5
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.80 E-value=2.3e-19 Score=160.52 Aligned_cols=115 Identities=16% Similarity=0.159 Sum_probs=91.4
Q ss_pred CCCcccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHH---HHHHHhhhhhccCCCeEEEEEecccCCCCCChh
Q 008311 327 LQPLVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQ---IYNESRLHLTRQESHYEVVWIPIVDHFIHWDDP 401 (570)
Q Consensus 327 ~~pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~---iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~ 401 (570)
+...+.+.+|+.+++++++||+|+|+|||+||+||+.++ |.+ +|+++++ .+++||+|+. |.
T Consensus 12 p~f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~------~~~~vi~i~~--------d~ 77 (142)
T 3eur_A 12 LNFTYTLDSGVKGTLYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAA------KKLKVLSIYP--------DE 77 (142)
T ss_dssp CCCEEEETTSCEEETTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHT------TSEEEEEEEC--------SS
T ss_pred CCcEEEcCCCCEeeHHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhcc------CCeEEEEEEc--------CC
Confidence 344466789999999999999999999999999999999 999 9999963 4799999996 33
Q ss_pred hHHHHHHHHcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcccc
Q 008311 402 TQKKFETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSPNA 458 (570)
Q Consensus 402 ~~~~F~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~na 458 (570)
+.+.+.++..+++. +||.+.|......+.+.|++.++|+++++|++|+|+.++.
T Consensus 78 ~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~ 131 (142)
T 3eur_A 78 ELDEWKKHRNDFAK---EWTNGYDKELVIKNKNLYDLRAIPTLYLLDKNKTVLLKDA 131 (142)
T ss_dssp CHHHHHHHGGGSCT---TSEEEECTTCHHHHTTCSCCTTCSEEEEECTTCBEEEEEE
T ss_pred CHHHHHHHHHhccc---ccccccCccchhhhhhhcCCCcCCeEEEECCCCcEEecCC
Confidence 44566666555442 3333446544455789999999999999999999998653
No 6
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.77 E-value=1.7e-18 Score=153.85 Aligned_cols=112 Identities=15% Similarity=0.125 Sum_probs=87.1
Q ss_pred CCcccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHH---HHHHHhhhhhccCCCeEEEEEecccCCCCCChhh
Q 008311 328 QPLVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQ---IYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPT 402 (570)
Q Consensus 328 ~pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~---iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~ 402 (570)
...+.+.+|+.+++++++||+|+|+|||+||+||+.++ |.+ +++++++ .+++||+|++ |.+
T Consensus 9 ~f~l~~~~g~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~------~~~~~v~v~~--------d~~ 74 (142)
T 3ewl_A 9 DFTYVTVHGDNSRMSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVEN------GTLRVLAIYP--------DEN 74 (142)
T ss_dssp CCEEECTTCCEEEGGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHH------TSEEEEEEEC--------SSC
T ss_pred CCEEECCCCCEEEhhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhcc------CCeEEEEEEe--------cCC
Confidence 34466789999999999999999999999999999998 777 9999963 3699999996 333
Q ss_pred HHHHHHHHcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 403 QKKFETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 403 ~~~F~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
.+.++++..+.++ +||.+.|..+.....+.|++.++|+++++|++|+++..
T Consensus 75 ~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 125 (142)
T 3ewl_A 75 REEWATKAVYMPQ---GWIVGWNKAGDIRTRQLYDIRATPTIYLLDGRKRVILK 125 (142)
T ss_dssp HHHHHHHHTTSCT---TCEEEECTTCHHHHTTCSCCCSSSEEEEECTTCBEEEC
T ss_pred HHHHHHHHHHcCC---CcceeeCCccchhhHHHcCCCCCCeEEEECCCCCEEec
Confidence 4455555554442 45555675433222458999999999999999999873
No 7
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.76 E-value=1.4e-18 Score=155.46 Aligned_cols=108 Identities=7% Similarity=0.032 Sum_probs=79.8
Q ss_pred CCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHH
Q 008311 333 GSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQ 410 (570)
Q Consensus 333 g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~ 410 (570)
+.+|+.+++++++||+|+|+|||+||+||+.++ |.++|+++++ ++++||+|++ |. ..+..++|.+ .
T Consensus 19 ~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~------~~~~vv~vs~-d~----~~~~~~~~~~-~ 86 (143)
T 4fo5_A 19 LGNDAKASFHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGP------DKIAMCSISM-DE----KESIFTETVK-I 86 (143)
T ss_dssp -----CCCSCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCT------TTEEEEEEEC-CS----CHHHHHHHHH-H
T ss_pred cCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCc------CCEEEEEEEc-cC----CHHHHHHHHH-H
Confidence 678999999999999999999999999999999 9999999862 4799999996 21 1222333332 2
Q ss_pred cCCCc-eeeccccccChH-HHHHHHHhCCCCCCceEEEECCCCcEEccc
Q 008311 411 SSMPW-YTVYHPTLIDRA-VIRYVKDVWHFKNKPILVVLDPQGRVVSPN 457 (570)
Q Consensus 411 ~~MPW-~aV~fP~l~D~~-~~~~L~~~y~V~~IPtlVVLDpqGkVv~~n 457 (570)
..++| ..+. |.. ....+.+.|++.++|++++||++|+|+.++
T Consensus 87 ~~~~~~~~~~-----d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 130 (143)
T 4fo5_A 87 DKLDLSTQFH-----EGLGKESELYKKYDLRKGFKNFLINDEGVIIAAN 130 (143)
T ss_dssp HTCCGGGEEE-----CTTGGGSHHHHHTTGGGCCCEEEECTTSBEEEES
T ss_pred hCCCCceeee-----cccccchHHHHHcCCCCCCcEEEECCCCEEEEcc
Confidence 45677 3333 321 134688999999999999999999999864
No 8
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.75 E-value=4.4e-18 Score=155.16 Aligned_cols=110 Identities=15% Similarity=0.263 Sum_probs=88.5
Q ss_pred CCcccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHH
Q 008311 328 QPLVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKK 405 (570)
Q Consensus 328 ~pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~ 405 (570)
...+.+.+|+.+++++++||+|+|+|||+||++|+.++ |.++|+++++ .+++||+|++ |...+.
T Consensus 17 ~f~l~~~~G~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~------~~~~vv~i~~--------d~~~~~ 82 (152)
T 2lrt_A 17 DIQLKDLKGNTRSLTDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYAS------QGFEIYQISL--------DGDEHF 82 (152)
T ss_dssp CCCEEBTTSCEECTTTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG------GTEEEEEEEC--------SCCHHH
T ss_pred CeEEEcCCCCEEeHHHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhcc------CCeEEEEEEc--------cCCHHH
Confidence 34456789999999999999999999999999999999 9999999973 3699999996 223345
Q ss_pred HHHHHcCCCceeeccccccChHH-HHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 406 FETLQSSMPWYTVYHPTLIDRAV-IRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 406 F~~~~~~MPW~aV~fP~l~D~~~-~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
++++..++||..+. |..+ ...+.+.|++.++|+++|||++|+|+..
T Consensus 83 ~~~~~~~~~~~~~~-----d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 129 (152)
T 2lrt_A 83 WKTSADNLPWVCVR-----DANGAYSSYISLYNVTNLPSVFLVNRNNELSAR 129 (152)
T ss_dssp HHHHHTTCSSEEEE-----CSSGGGCHHHHHHTCCSCSEEEEEETTTEEEEE
T ss_pred HHHHHhCCCceEEE-----CCCCcchHHHHHcCcccCceEEEECCCCeEEEe
Confidence 56666667775544 4322 2247889999999999999999999875
No 9
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.74 E-value=1.6e-17 Score=162.90 Aligned_cols=195 Identities=9% Similarity=0.072 Sum_probs=138.2
Q ss_pred ccCC-CCC--eeeccc-cCCCEEEEEEe-cCCCHHhH-HHH--HHHHHHHHhhhhhccCCCe-EEEEEecccCCCCCChh
Q 008311 331 VDGS-TKR--RVNIEV-LRRKNVLLLIS-DLDISQEE-LSI--LEQIYNESRLHLTRQESHY-EVVWIPIVDHFIHWDDP 401 (570)
Q Consensus 331 ~~g~-~G~--~Vsls~-LkGKvVlL~Fw-AsWCpPCr-~e~--L~~iY~elk~~~~k~~~~f-EIV~IsIvD~s~~w~D~ 401 (570)
+.+. +|+ .+++++ ++||+|+|+|| |+|||+|+ .++ |.++|+++++ .++ +||+||. | +..
T Consensus 14 l~~~~~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~------~~~~~vv~is~-d-----~~~ 81 (241)
T 1nm3_A 14 FRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKK------YGVDDILVVSV-N-----DTF 81 (241)
T ss_dssp EEEEETTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHH------TTCCEEEEEES-S-----CHH
T ss_pred EEcccCCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHH------CCCCEEEEEEc-C-----CHH
Confidence 4443 566 899999 99999999999 99999999 899 9999999973 479 9999996 3 233
Q ss_pred hHHHHHHHHcCCCceeeccccccChHHHHHHHHhCCCC-----------CCceEEEECCCCcEEccccchhHhhhcCCCC
Q 008311 402 TQKKFETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFK-----------NKPILVVLDPQGRVVSPNALHMMWIWGSNAF 470 (570)
Q Consensus 402 ~~~~F~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~-----------~IPtlVVLDpqGkVv~~na~~~I~~~G~~aF 470 (570)
..+.|.+- ...+ .||.+.|. ...+.+.||+. .+|+++|| ++|+|+....-. ...+=
T Consensus 82 ~~~~~~~~-~~~~----~~~~l~D~--~~~~~~~~gv~~~~~~~g~~~~~~p~t~li-~~G~i~~~~~~~-----~~~~~ 148 (241)
T 1nm3_A 82 VMNAWKED-EKSE----NISFIPDG--NGEFTEGMGMLVGKEDLGFGKRSWRYSMLV-KNGVVEKMFIEP-----NEPGD 148 (241)
T ss_dssp HHHHHHHH-TTCT----TSEEEECT--TSHHHHHTTCEEECTTTTCCEEECCEEEEE-ETTEEEEEEECC-----SCSSC
T ss_pred HHHHHHHh-cCCC----ceEEEECC--CcHHHHHhCceeecccccCcccceeEEEEE-ECCEEEEEEEec-----cCCCc
Confidence 44555442 1222 15555675 34688889985 35999999 999998753211 11112
Q ss_pred CCCchhHHHHhhhcCccccccccCCCccccccccCCeEEEEEecCCCchHHHHHHHHHHHHhhCCCCEEEEEEecCCchh
Q 008311 471 PFTSLREEALWKEETWRLELLVDGIDPLVLDWIKEGKYIFLYGGDDVEWVRKFTTAARSVANTARIPLEMVYVGKSTKRD 550 (570)
Q Consensus 471 PFt~~~~e~L~~e~~w~~~ll~d~~d~~i~~~~~egk~I~lYfgad~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e 550 (570)
|+.....+++++. +. +. ......|-+|....|+.|++-...| ++.++++|.+-|..+...+
T Consensus 149 ~~~~~~~~~il~~-------l~----~~----~i~~~~i~ly~~~~Cp~C~~a~~~L----~~~~i~~~~~~i~~~~~~~ 209 (241)
T 1nm3_A 149 PFKVSDADTMLKY-------LA----PQ----HQVQESISIFTKPGCPFCAKAKQLL----HDKGLSFEEIILGHDATIV 209 (241)
T ss_dssp CCSSSSHHHHHHH-------HC----TT----SCCCCCEEEEECSSCHHHHHHHHHH----HHHTCCCEEEETTTTCCHH
T ss_pred cceecCHHHHHHH-------hh----hh----ccccceEEEEECCCChHHHHHHHHH----HHcCCceEEEECCCchHHH
Confidence 4444556666643 11 11 1134458889888899997554444 4559999999999887768
Q ss_pred hhhhccccccccccccCCC
Q 008311 551 KCGESWQPLQLKSLVTSGK 569 (570)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~ 569 (570)
.+++..+....|.++++|+
T Consensus 210 ~l~~~~g~~~vP~~~~~g~ 228 (241)
T 1nm3_A 210 SVRAVSGRTTVPQVFIGGK 228 (241)
T ss_dssp HHHHHTCCSSSCEEEETTE
T ss_pred HHHHHhCCCCcCEEEECCE
Confidence 8888888889999999885
No 10
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.73 E-value=1.5e-17 Score=150.02 Aligned_cols=115 Identities=16% Similarity=0.236 Sum_probs=87.9
Q ss_pred CCCcccCCCCCeeecc--ccCCCEEEEEEecCCCHH--hHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCCh
Q 008311 327 LQPLVDGSTKRRVNIE--VLRRKNVLLLISDLDISQ--EELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDD 400 (570)
Q Consensus 327 ~~pl~~g~~G~~Vsls--~LkGKvVlL~FwAsWCpP--Cr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D 400 (570)
+...+.+.+|+.++++ +++||+|+|+|||+||+| |+.++ |.++|++++. +++++||+|++ |. ..
T Consensus 12 p~f~l~~~~g~~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~-----~~~~~~v~v~~-d~----~~ 81 (150)
T 3fw2_A 12 PFFSLPNAKGEKITRSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKK-----NKYIGMLGISL-DV----DK 81 (150)
T ss_dssp CCCCEEBTTCCEECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTT-----CSSEEEEEEEC-CS----CH
T ss_pred CccEeECCCCCEEecchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhcc-----CCCeEEEEEEc-CC----CH
Confidence 3445678899999999 999999999999999999 99999 9999999931 34799999996 21 12
Q ss_pred hhHHHHHHHHcCCCceeeccccccChH-HHHHHHHhCCCCCCceEEEECCCCcEEccc
Q 008311 401 PTQKKFETLQSSMPWYTVYHPTLIDRA-VIRYVKDVWHFKNKPILVVLDPQGRVVSPN 457 (570)
Q Consensus 401 ~~~~~F~~~~~~MPW~aV~fP~l~D~~-~~~~L~~~y~V~~IPtlVVLDpqGkVv~~n 457 (570)
+..+.|.+ ...++|..+. |.. ....+.+.|++.++|+++++|++|+++...
T Consensus 82 ~~~~~~~~-~~~~~~~~~~-----d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 133 (150)
T 3fw2_A 82 QQWKDAIK-RDTLDWEQVC-----DFGGLNSEVAKQYSIYKIPANILLSSDGKILAKN 133 (150)
T ss_dssp HHHHHHHH-HTTCCSEEEC-----CSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEES
T ss_pred HHHHHHHH-HhCCCceEEE-----cCcccchHHHHHcCCCccCeEEEECCCCEEEEcc
Confidence 23333332 2355665443 431 134688999999999999999999999875
No 11
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.73 E-value=1.6e-17 Score=150.08 Aligned_cols=113 Identities=17% Similarity=0.198 Sum_probs=87.1
Q ss_pred CCcccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHH
Q 008311 328 QPLVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKK 405 (570)
Q Consensus 328 ~pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~ 405 (570)
...+.+.+|+.+++++++||+|+|+|||+||++|+.++ |.++++++++ .+++|++|++ |. +.+..+.
T Consensus 11 ~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~------~~~~vv~v~~-d~----~~~~~~~ 79 (152)
T 2lrn_A 11 AITGIDLKGNSVSLNDFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKD------KGFTIYGVST-DR----REEDWKK 79 (152)
T ss_dssp CCEEECSSSCEEESGGGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTT------TTEEEEEEEC-CS----CHHHHHH
T ss_pred CceeEcCCCCEEeHHHcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhcc------CCeEEEEEEc-cC----CHHHHHH
Confidence 34456789999999999999999999999999999999 9999999962 4699999996 21 1223333
Q ss_pred HHHHHcCCCceeeccccccChHH-HHHHHHhCCCCCCceEEEECCCCcEEccc
Q 008311 406 FETLQSSMPWYTVYHPTLIDRAV-IRYVKDVWHFKNKPILVVLDPQGRVVSPN 457 (570)
Q Consensus 406 F~~~~~~MPW~aV~fP~l~D~~~-~~~L~~~y~V~~IPtlVVLDpqGkVv~~n 457 (570)
|.+ ...++|..+. |... ...+.+.|++.++|+++++|++|+++...
T Consensus 80 ~~~-~~~~~~~~~~-----d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 126 (152)
T 2lrn_A 80 AIE-EDKSYWNQVL-----LQKDDVKDVLESYCIVGFPHIILVDPEGKIVAKE 126 (152)
T ss_dssp HHH-HHTCCSEEEE-----ECHHHHHHHHHHTTCCSSCEEEEECTTSEEEEEC
T ss_pred HHH-HhCCCCeEEe-----cccchhHHHHHHhCCCcCCeEEEECCCCeEEEee
Confidence 332 2355665443 4321 46788999999999999999999999764
No 12
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.71 E-value=8.3e-18 Score=152.09 Aligned_cols=111 Identities=13% Similarity=0.178 Sum_probs=81.3
Q ss_pred CCCeeeccccCCCEEEEEEecCCCHHhHHH-H--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHc
Q 008311 335 TKRRVNIEVLRRKNVLLLISDLDISQEELS-I--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQS 411 (570)
Q Consensus 335 ~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e-~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~ 411 (570)
+|+.+++++++||+|+|+|||+||+||+.+ + |.++|++++ +++++||.|++.... ..+.+.+..+++..
T Consensus 17 ~g~~~~l~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~------~~~v~~v~v~~~~~~--~~~~~~~~~~~~~~ 88 (158)
T 3eyt_A 17 SATDLTLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFP------EDKVAVLGLHTVFEH--HEAMTPISLKAFLH 88 (158)
T ss_dssp CSSCCCTGGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSC------TTTEEEEEEECCCSC--GGGSCHHHHHHHHH
T ss_pred CCCccCHHHhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhC------cCCEEEEEEEecccc--cccCCHHHHHHHHH
Confidence 689999999999999999999999999996 7 999999996 247999999962100 00122333333333
Q ss_pred CCCceeeccccccChHHHH---HHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 412 SMPWYTVYHPTLIDRAVIR---YVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 412 ~MPW~aV~fP~l~D~~~~~---~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
+. .++||.+.|..... .+.+.|++.++|+++|+|++|+++..
T Consensus 89 ~~---~~~~~~~~d~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 133 (158)
T 3eyt_A 89 EY---RIKFPVGVDQPGDGAMPRTMAAYQMRGTPSLLLIDKAGDLRAH 133 (158)
T ss_dssp HT---TCCSCEEEECCCSSSSCHHHHHTTCCSSSEEEEECTTSEEEEE
T ss_pred Hc---CCCceEEEcCccchhhHHHHHHcCCCCCCEEEEECCCCCEEEE
Confidence 22 22345445543211 58899999999999999999999875
No 13
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.71 E-value=3.2e-17 Score=148.01 Aligned_cols=110 Identities=13% Similarity=0.160 Sum_probs=84.1
Q ss_pred CcccC-CCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHH
Q 008311 329 PLVDG-STKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKK 405 (570)
Q Consensus 329 pl~~g-~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~ 405 (570)
|.|.. .+|+.+++++++||+|+|+|||+||+||+.++ |.++|++++ +.+++||.|++ | +.+....
T Consensus 6 ~~~~~~~~G~~~~l~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~------~~~v~vv~v~~-d-----~~~~~~~ 73 (151)
T 3raz_A 6 DELAGWKDNTPQSLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQK------KGSVDMVGIAL-D-----TSDNIGN 73 (151)
T ss_dssp -CEEETTTCCEECGGGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSC------TTTEEEEEEES-S-----CHHHHHH
T ss_pred chhhcccCCCEecHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhc------cCCeEEEEEEC-C-----ChHHHHH
Confidence 34433 68999999999999999999999999999999 999999985 35799999997 3 2344445
Q ss_pred HHHHHcCCCceeeccccccCh-HHHHHHHHhCC--CCCCceEEEECCCCcEEcc
Q 008311 406 FETLQSSMPWYTVYHPTLIDR-AVIRYVKDVWH--FKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 406 F~~~~~~MPW~aV~fP~l~D~-~~~~~L~~~y~--V~~IPtlVVLDpqGkVv~~ 456 (570)
|.+. ..++| |.+.|. .....+.+.|+ +.++|+++++|++|+++..
T Consensus 74 ~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 121 (151)
T 3raz_A 74 FLKQ-TPVSY-----PIWRYTGANSRNFMKTYGNTVGVLPFTVVEAPKCGYRQT 121 (151)
T ss_dssp HHHH-SCCSS-----CEEEECCSCHHHHHHTTTCCSCCSSEEEEEETTTTEEEE
T ss_pred HHHH-cCCCC-----ceEecCccchHHHHHHhCCccCCCCEEEEECCCCcEEEE
Confidence 5432 33444 333232 22457889999 9999999999999999764
No 14
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.54 E-value=7.7e-19 Score=155.68 Aligned_cols=120 Identities=15% Similarity=0.185 Sum_probs=92.3
Q ss_pred cccCCCCCeeeccc-cCCC-EEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHH
Q 008311 330 LVDGSTKRRVNIEV-LRRK-NVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKK 405 (570)
Q Consensus 330 l~~g~~G~~Vsls~-LkGK-vVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~ 405 (570)
.+.+.+|+.+++++ ++|| +|+|+|||+|||+|+.++ |.++|+++++ .+.+++|++|++.+ +.+..+.
T Consensus 8 ~l~~~~g~~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~----~~~~~~v~~v~~d~-----~~~~~~~ 78 (143)
T 2lus_A 8 KLVKKNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVD----DSAPFEIIFVSSDR-----SEDDMFQ 78 (143)
Confidence 35567889999999 9999 999999999999999999 9999999963 13579999999621 1122233
Q ss_pred HHHHHcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEccccchhHh
Q 008311 406 FETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSPNALHMMW 463 (570)
Q Consensus 406 F~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~na~~~I~ 463 (570)
|.+ ....+|..+++. .+....+.+.|++.++|+++++|++|+++..+++..+.
T Consensus 79 ~~~-~~~~~~~~~~~~----~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~ 131 (143)
T 2lus_A 79 YMM-ESHGDWLAIPYR----SGPASNVTAKYGITGIPALVIVKKDGTLISMNGRGEVQ 131 (143)
Confidence 322 134577766652 22345788999999999999999999999998887665
No 15
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.70 E-value=1.6e-17 Score=150.23 Aligned_cols=112 Identities=15% Similarity=0.168 Sum_probs=81.2
Q ss_pred CCCCeeeccccCCCEEEEEEecCCCHHhHHH-H--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHH
Q 008311 334 STKRRVNIEVLRRKNVLLLISDLDISQEELS-I--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQ 410 (570)
Q Consensus 334 ~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e-~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~ 410 (570)
.+|+.+++++++||+|+|+|||+||+||+.+ + |.++|+++++ .+++||.|++.... -.+.+.+..+++.
T Consensus 18 ~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~------~~v~~v~v~~~~~~--~~~~~~~~~~~~~ 89 (160)
T 3lor_A 18 VNHEGLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDE------SQVQVIGLHSVFEH--HDVMTPEALKVFI 89 (160)
T ss_dssp SSSCCCCHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCT------TTEEEEEEECCCSC--GGGSCHHHHHHHH
T ss_pred cCCCccCHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCc------CCcEEEEEeccccc--cccCCHHHHHHHH
Confidence 5789999999999999999999999999996 7 9999999962 46999999962100 0012233344333
Q ss_pred cCCCceeeccccccChHHH----HHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 411 SSMPWYTVYHPTLIDRAVI----RYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 411 ~~MPW~aV~fP~l~D~~~~----~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
.+. .++||.+.|.... ..+.+.|++.++|+++|+|++|+++..
T Consensus 90 ~~~---~~~~~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 136 (160)
T 3lor_A 90 DEF---GIKFPVAVDMPREGQRIPSTMKKYRLEGTPSIILADRKGRIRQV 136 (160)
T ss_dssp HHT---TCCSCEEEECCCTTCSSCHHHHHTTCCSSSEEEEECTTSBEEEE
T ss_pred HHc---CCCCcEEECCccccchhhhHHHhcccCccceEEEECCCCcEEEE
Confidence 322 2234444454221 127889999999999999999999875
No 16
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.69 E-value=4.2e-17 Score=144.63 Aligned_cols=114 Identities=13% Similarity=0.216 Sum_probs=86.9
Q ss_pred CCCcccCCCCCeeecc--ccCCCEEEEEEecCCCHHhHHHH--HHHHHHHH-hhhhhccCCCeEEEEEecccCCCCCChh
Q 008311 327 LQPLVDGSTKRRVNIE--VLRRKNVLLLISDLDISQEELSI--LEQIYNES-RLHLTRQESHYEVVWIPIVDHFIHWDDP 401 (570)
Q Consensus 327 ~~pl~~g~~G~~Vsls--~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~el-k~~~~k~~~~fEIV~IsIvD~s~~w~D~ 401 (570)
+...+.+.+|+.++++ +++||+|+|+|||+||++|+.++ |.++++++ + +.+++|+.|++ |. ..+
T Consensus 12 p~~~l~~~~g~~~~l~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~------~~~~~~v~v~~-d~----~~~ 80 (148)
T 3fkf_A 12 PYFSLPNEKGEKLSRSAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKK------NKNFAMLGISL-DI----DRE 80 (148)
T ss_dssp CCCCEEBTTSCEECTTSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTT------CTTEEEEEEEC-CS----CHH
T ss_pred CCeEeeCCCCCEEeccccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcC------CCCeEEEEEEC-CC----CHH
Confidence 3444667899999999 99999999999999999999999 99999998 4 34699999996 21 122
Q ss_pred hHHHHHHHHcCCCceeeccccccChHH-HHHHHHhCCCCCCceEEEECCCCcEEccc
Q 008311 402 TQKKFETLQSSMPWYTVYHPTLIDRAV-IRYVKDVWHFKNKPILVVLDPQGRVVSPN 457 (570)
Q Consensus 402 ~~~~F~~~~~~MPW~aV~fP~l~D~~~-~~~L~~~y~V~~IPtlVVLDpqGkVv~~n 457 (570)
..+.|.+ ...++|..+. |... ...+.+.|++.++|+++++|++|+++...
T Consensus 81 ~~~~~~~-~~~~~~~~~~-----d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 131 (148)
T 3fkf_A 81 AWETAIK-KDTLSWDQVC-----DFTGLSSETAKQYAILTLPTNILLSPTGKILARD 131 (148)
T ss_dssp HHHHHHH-HTTCCSEEEC-----CSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEES
T ss_pred HHHHHHH-HcCCCceEEE-----ccCCcchHHHHhcCCCCcCEEEEECCCCeEEEec
Confidence 2333332 2455665443 3211 34688999999999999999999999764
No 17
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.68 E-value=3e-16 Score=142.39 Aligned_cols=119 Identities=13% Similarity=0.099 Sum_probs=88.7
Q ss_pred CcccCCCCCeeeccccCCCEEEEEEecCCCHH-hHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHH
Q 008311 329 PLVDGSTKRRVNIEVLRRKNVLLLISDLDISQ-EELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKK 405 (570)
Q Consensus 329 pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpP-Cr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~ 405 (570)
..+.+.+|+.+++++++||+|+|+|||+||+| |+.++ |.++|+++++. .+..+++||+|++ |...+ +.+..+.
T Consensus 6 f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~--~~~~~~~vv~vs~-d~~~d-~~~~~~~ 81 (164)
T 2ggt_A 6 FSLTTHTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSI--TTLPDLTPLFISI-DPERD-TKEAIAN 81 (164)
T ss_dssp CEEEETTSCEEEGGGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHS--SSSCCEEEEEEES-CTTTC-CHHHHHH
T ss_pred eEEEeCCCCEEeHHHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhc--cCCCcEEEEEEEe-CCCCC-CHHHHHH
Confidence 44567899999999999999999999999999 99999 99999999741 1124899999997 32100 1223344
Q ss_pred HHHHHcCCCceeeccccccChHHHHHHHHhCCCCCCc---------------eEEEECCCCcEEcc
Q 008311 406 FETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKP---------------ILVVLDPQGRVVSP 456 (570)
Q Consensus 406 F~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IP---------------tlVVLDpqGkVv~~ 456 (570)
|.+. ...+|..+.- +.+....+.+.|++.++| +++|||++|+++..
T Consensus 82 ~~~~-~~~~~~~l~~----~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~ 142 (164)
T 2ggt_A 82 YVKE-FSPKLVGLTG----TREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDY 142 (164)
T ss_dssp HHHT-TCSSCEEEEC----CHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEE
T ss_pred HHHH-cCCCeEEEeC----CHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEE
Confidence 4432 3456655432 233456788999999999 89999999999875
No 18
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.68 E-value=1.8e-17 Score=147.12 Aligned_cols=113 Identities=17% Similarity=0.192 Sum_probs=85.9
Q ss_pred CCCcccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHH
Q 008311 327 LQPLVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQK 404 (570)
Q Consensus 327 ~~pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~ 404 (570)
+...+.+.+|+.+++++++||+|+|+|||+||++|+.++ |.++++++++ .+++||.|++ |. +.+..+
T Consensus 12 p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~------~~~~~v~v~~-d~----~~~~~~ 80 (148)
T 3hcz_A 12 PNLYMTDTTGTYRYLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRA------KGIQVYAANI-ER----KDEEWL 80 (148)
T ss_dssp CCCCCBCTTSCBCCGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGG------GTEEEEEEEC-CS----SSHHHH
T ss_pred CceEEecCCCCEEEhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhcc------CCEEEEEEEe-cC----CHHHHH
Confidence 334466789999999999999999999999999999999 9999999963 3699999997 21 222334
Q ss_pred HHHHHHcCCC-ceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 405 KFETLQSSMP-WYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 405 ~F~~~~~~MP-W~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
+|.+. ..++ |. .+.|......+.+.|++.++|+++++|++|+++..
T Consensus 81 ~~~~~-~~~~~~~-----~~~d~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~ 127 (148)
T 3hcz_A 81 KFIRS-KKIGGWL-----NVRDSKNHTDFKITYDIYATPVLYVLDKNKVIIAK 127 (148)
T ss_dssp HHHHH-HTCTTSE-----EEECTTCCCCHHHHHCCCSSCEEEEECTTCBEEEE
T ss_pred HHHHH-cCCCCce-----EEeccccchhHHHhcCcCCCCEEEEECCCCcEEEe
Confidence 44332 2344 43 23354333337889999999999999999999875
No 19
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.68 E-value=1.5e-16 Score=146.03 Aligned_cols=110 Identities=14% Similarity=0.157 Sum_probs=86.7
Q ss_pred CCCcccCCCCCeeeccccCCCE-EEEEEe-cCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhh
Q 008311 327 LQPLVDGSTKRRVNIEVLRRKN-VLLLIS-DLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPT 402 (570)
Q Consensus 327 ~~pl~~g~~G~~Vsls~LkGKv-VlL~Fw-AsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~ 402 (570)
+...+.+.+|+.+++++++||+ |+|+|| |+|||+|+.++ |.++|+++++ .+++||+|++ | +.+.
T Consensus 9 P~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~------~~v~vv~vs~-d-----~~~~ 76 (161)
T 3drn_A 9 PLFEGIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKD------YDVVVIGVSS-D-----DINS 76 (161)
T ss_dssp CCCEEEETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHT------TCEEEEEEES-C-----CHHH
T ss_pred CCeEeecCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHH------cCCEEEEEeC-C-----CHHH
Confidence 3345567899999999999998 999999 99999999999 9999999973 4699999996 3 2334
Q ss_pred HHHHHHHHcCCCceeeccccccChHHHHHHHHhCCCCC----CceEEEECCCCcEEcc
Q 008311 403 QKKFETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKN----KPILVVLDPQGRVVSP 456 (570)
Q Consensus 403 ~~~F~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~----IPtlVVLDpqGkVv~~ 456 (570)
.+.|.+. ..++ ||.+.|. ...+.+.|++.+ +|+++|||++|+|+..
T Consensus 77 ~~~~~~~-~~~~-----~~~~~d~--~~~~~~~~~v~~~~~~~P~~~lid~~G~i~~~ 126 (161)
T 3drn_A 77 HKRFKEK-YKLP-----FILVSDP--DKKIRELYGAKGFILPARITFVIDKKGIIRHI 126 (161)
T ss_dssp HHHHHHH-TTCC-----SEEEECT--TSHHHHHTTCCCSSSCCCEEEEECTTSBEEEE
T ss_pred HHHHHHH-hCCC-----ceEEECC--cHHHHHHcCCCCcCcccceEEEECCCCEEEEE
Confidence 4444432 2334 4444563 346889999999 9999999999999865
No 20
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.67 E-value=1.7e-16 Score=142.62 Aligned_cols=109 Identities=17% Similarity=0.300 Sum_probs=84.7
Q ss_pred CcccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHH
Q 008311 329 PLVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKF 406 (570)
Q Consensus 329 pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F 406 (570)
..+.+.+|+.+++++++||+|+|+|||+||++|+.++ |.++++++++ .+++|++|++ |. +.+..+.|
T Consensus 9 ~~l~~~~g~~~~l~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~------~~v~vv~v~~-d~----~~~~~~~~ 77 (151)
T 2f9s_A 9 FVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKS------QGVEIVAVNV-GE----SKIAVHNF 77 (151)
T ss_dssp CEEECTTCCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG------GTEEEEEEEE-SC----CHHHHHHH
T ss_pred ceeEcCCCCEEEHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcc------CCeEEEEEEC-CC----CHHHHHHH
Confidence 4456789999999999999999999999999999999 9999999963 3699999997 21 23333444
Q ss_pred HHHHcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 407 ETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 407 ~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
.+. ..++ ||.+.|. ...+.+.|++.++|+++++|++|+++..
T Consensus 78 ~~~-~~~~-----~~~~~d~--~~~~~~~~~v~~~P~~~lid~~G~i~~~ 119 (151)
T 2f9s_A 78 MKS-YGVN-----FPVVLDT--DRQVLDAYDVSPLPTTFLINPEGKVVKV 119 (151)
T ss_dssp HHH-HTCC-----SCEEEET--TSHHHHHTTCCSSCEEEEECTTSEEEEE
T ss_pred HHH-cCCC-----ceEEECC--chHHHHhcCCCCCCeEEEECCCCcEEEE
Confidence 332 2333 4444454 2467889999999999999999999864
No 21
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.67 E-value=2.7e-16 Score=140.88 Aligned_cols=108 Identities=15% Similarity=0.166 Sum_probs=83.8
Q ss_pred CcccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHH
Q 008311 329 PLVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKF 406 (570)
Q Consensus 329 pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F 406 (570)
..+.+ +|+.+++++++||+|+|+||++||++|+.++ |.++++++++ .+++||+|++ | .+.+..
T Consensus 12 f~l~~-~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~------~~~~~v~v~~-d-------~~~~~~ 76 (152)
T 3gl3_A 12 FALPG-KTGVVKLSDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKA------KGFQVVAVNL-D-------AKTGDA 76 (152)
T ss_dssp CEEEB-SSSEEEGGGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGG------GTEEEEEEEC-C-------SSHHHH
T ss_pred eEeeC-CCCeEeHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhc------CCeEEEEEEC-C-------CCHHHH
Confidence 34556 8999999999999999999999999999999 9999999963 3699999996 2 223333
Q ss_pred HHHHcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 407 ETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 407 ~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
.++..+.+ ++||.+.|.. ..+.+.|++.++|+++++|++|+++..
T Consensus 77 ~~~~~~~~---~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 121 (152)
T 3gl3_A 77 MKFLAQVP---AEFTVAFDPK--GQTPRLYGVKGMPTSFLIDRNGKVLLQ 121 (152)
T ss_dssp HHHHHHSC---CCSEEEECTT--CHHHHHTTCCSSSEEEEECTTSBEEEE
T ss_pred HHHHHHcC---CCCceeECCc--chhHHHcCCCCCCeEEEECCCCCEEEE
Confidence 33333332 2344444642 468899999999999999999999875
No 22
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.67 E-value=4.6e-16 Score=134.75 Aligned_cols=114 Identities=17% Similarity=0.230 Sum_probs=87.5
Q ss_pred CcccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHH
Q 008311 329 PLVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKF 406 (570)
Q Consensus 329 pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F 406 (570)
..+.+.+|+.+++++++||+|+|+||++||++|+.++ |.+++++++ .++.+|.|...+.+ .+.+.+.+
T Consensus 5 f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~v~i~~~~~~---~~~~~~~~ 74 (138)
T 4evm_A 5 FELMGVDGKTYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEAG-------DDYVVLTVVSPGHK---GEQSEADF 74 (138)
T ss_dssp CEEEBTTSCEEEGGGGTTSEEEEEECCTTCHHHHHHHHHHHHHHHTCT-------TTEEEEEEECTTST---TCCCHHHH
T ss_pred ceeECCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhC-------CCcEEEEEEcCCCC---chhhHHHH
Confidence 3456789999999999999999999999999999999 999988752 46888888542211 23445666
Q ss_pred HHHHcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 407 ETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 407 ~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
.++..+.++. +||.+.|. ...+.+.|++.++|+++++|++|+++..
T Consensus 75 ~~~~~~~~~~--~~~~~~d~--~~~~~~~~~v~~~P~~~lid~~G~i~~~ 120 (138)
T 4evm_A 75 KNWYKGLDYK--NLPVLVDP--SGKLLETYGVRSYPTQAFIDKEGKLVKT 120 (138)
T ss_dssp HHHHTTCCCT--TCCEEECT--TCHHHHHTTCCSSSEEEEECTTCCEEEE
T ss_pred HHHHhhcCCC--CeeEEECc--chHHHHHcCcccCCeEEEECCCCcEEEe
Confidence 6666655542 44444554 3468899999999999999999999865
No 23
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.66 E-value=8.2e-16 Score=140.68 Aligned_cols=120 Identities=11% Similarity=0.047 Sum_probs=88.0
Q ss_pred CCcccCCCCCeeeccccCCCEEEEEEecCCCHH-hHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHH
Q 008311 328 QPLVDGSTKRRVNIEVLRRKNVLLLISDLDISQ-EELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQK 404 (570)
Q Consensus 328 ~pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpP-Cr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~ 404 (570)
...+.+.+|+.+++++++||+|+|+|||+||+| |+.++ |.++++++++.+ ...+++||+|++ |...+ +.+..+
T Consensus 8 ~f~l~~~~G~~~~l~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~--~~~~v~vv~is~-d~~~d-~~~~~~ 83 (171)
T 2rli_A 8 DFHLLDHRGRARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEP--GLPPVQPVFITV-DPERD-DVEAMA 83 (171)
T ss_dssp CCEEEETTSCEEETTTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHST--TSCCEEEEEEES-CSTTC-CHHHHH
T ss_pred CeEEEeCCCCEEeHHHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhcc--CCCceEEEEEEE-CCCCC-CHHHHH
Confidence 345667899999999999999999999999999 99999 999999996311 125899999997 32100 122334
Q ss_pred HHHHHHcCCCceeeccccccChHHHHHHHHhCCCCCCc---------------eEEEECCCCcEEcc
Q 008311 405 KFETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKP---------------ILVVLDPQGRVVSP 456 (570)
Q Consensus 405 ~F~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IP---------------tlVVLDpqGkVv~~ 456 (570)
.|.+. ...+|..+.- +.+....+.+.|++..+| +++|||++|+|+..
T Consensus 84 ~~~~~-~~~~~~~l~~----~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~ 145 (171)
T 2rli_A 84 RYVQD-FHPRLLGLTG----STKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDY 145 (171)
T ss_dssp HHHHT-TCTTCCEEEC----CHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEE
T ss_pred HHHHH-cCCCeEEEeC----CHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEE
Confidence 44331 2345544432 223345788899999888 99999999999875
No 24
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.66 E-value=8.2e-17 Score=146.11 Aligned_cols=115 Identities=10% Similarity=0.134 Sum_probs=87.6
Q ss_pred CcccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHH
Q 008311 329 PLVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKF 406 (570)
Q Consensus 329 pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F 406 (570)
|.+.+.+|+.+++++++||+|+|+|||+||++|+.++ |.+++++++. .+++||+|++.+.. .+...+.+
T Consensus 21 p~l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~------~~~~vv~v~~~~~~---~~~~~~~~ 91 (164)
T 2h30_A 21 STMKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKF------SSANLITVASPGFL---HEKKDGEF 91 (164)
T ss_dssp TTCEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGG------TTSEEEEEECTTST---TCCCTTHH
T ss_pred CccCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccc------CCcEEEEEEcCCCc---cccCHHHH
Confidence 4677788999999999999999999999999999999 9999999863 46999999973211 12233456
Q ss_pred HHHHcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 407 ETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 407 ~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
.++.....|.. +|...|. ...+.+.|++.++|+++++|++|+++..
T Consensus 92 ~~~~~~~~~~~--~~~~~d~--~~~~~~~~~v~~~P~~~lid~~G~i~~~ 137 (164)
T 2h30_A 92 QKWYAGLNYPK--LPVVTDN--GGTIAQNLNISVYPSWALIGKDGDVQRI 137 (164)
T ss_dssp HHHHTTSCCTT--SCEEECT--TCHHHHHTTCCSSSEEEEECTTSCEEEE
T ss_pred HHHHHhCCCCc--ceEEEcC--chHHHHHcCCCccceEEEECCCCcEEEE
Confidence 66555444321 3333343 3468889999999999999999999864
No 25
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.65 E-value=5.5e-16 Score=139.19 Aligned_cols=111 Identities=14% Similarity=0.178 Sum_probs=84.7
Q ss_pred CCcccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHH
Q 008311 328 QPLVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKK 405 (570)
Q Consensus 328 ~pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~ 405 (570)
...+.+.+|+.+++++++||+|+|+||++||++|+.++ |.+++++++ +.+++|+.|++ |.. +.+..+.
T Consensus 10 ~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~------~~~~~~v~v~~-d~~---~~~~~~~ 79 (154)
T 3kcm_A 10 DFTLNTLNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMA------GKPFRMLCVSI-DEG---GKVAVEE 79 (154)
T ss_dssp CCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTT------TSSEEEEEEEC-CTT---HHHHHHH
T ss_pred CeEEEcCCCCEEehhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhc------cCCeEEEEEEc-CCc---chHHHHH
Confidence 34466789999999999999999999999999999999 999999985 24799999996 210 1222333
Q ss_pred HHHHHcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 406 FETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 406 F~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
|.+. ...+ ||.+.|. ...+.+.|++.++|+++|||++|+++..
T Consensus 80 ~~~~-~~~~-----~~~~~d~--~~~~~~~~~v~~~P~~~lid~~G~i~~~ 122 (154)
T 3kcm_A 80 FFRK-TGFT-----LPVLLDA--DKRVGKLYGTTGVPETFVIDRHGVILKK 122 (154)
T ss_dssp HHHH-HCCC-----CCEEECT--TCHHHHHHTCCSBCEEEEECTTSBEEEE
T ss_pred HHHH-cCCC-----eeEEecC--chHHHHHhCCCCCCeEEEECCCCcEEEE
Confidence 3322 2333 4444454 3468889999999999999999999875
No 26
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.65 E-value=6.3e-16 Score=149.78 Aligned_cols=128 Identities=7% Similarity=-0.053 Sum_probs=83.6
Q ss_pred ccCCCCCc--ccCCC-CCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCC-C
Q 008311 323 AKDDLQPL--VDGST-KRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHF-I 396 (570)
Q Consensus 323 ~k~~~~pl--~~g~~-G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s-~ 396 (570)
......|. +.+.+ |+.+++++++||+|+|+|||+|||||+.++ |.++|+++++ ++++||+|++.+.. .
T Consensus 21 ~~~~~~p~f~l~~~~~G~~v~l~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~------~g~~vv~v~~d~~~~~ 94 (208)
T 2f8a_A 21 QSMQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGP------RGLVVLGFPCNQFGHQ 94 (208)
T ss_dssp -CCCCGGGCEECBTTCSSCEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTEEEEEEECCCSTTT
T ss_pred hhcCccCceEeeeCCCCCCccHHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccC------CCeEEEEEECCccccc
Confidence 33333444 45677 999999999999999999999999999999 9999999973 36999999972100 0
Q ss_pred C-CChhhHHHHHHHHcCCCceeeccccccCh--------HHHHHHHHhC-------------------------CCCCCc
Q 008311 397 H-WDDPTQKKFETLQSSMPWYTVYHPTLIDR--------AVIRYVKDVW-------------------------HFKNKP 442 (570)
Q Consensus 397 ~-w~D~~~~~F~~~~~~MPW~aV~fP~l~D~--------~~~~~L~~~y-------------------------~V~~IP 442 (570)
+ -+.+..+.|.++...-.-+.++||.+.|. +..+.+++.+ +++..|
T Consensus 95 e~d~~~~i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p 174 (208)
T 2f8a_A 95 ENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNF 174 (208)
T ss_dssp TCSCHHHHHHHHHHTSSCTTCCCSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTT
T ss_pred CCCCHHHHHHHHHhcccccccccceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCc
Confidence 0 01233445544211000134456544221 1223343333 266779
Q ss_pred eEEEECCCCcEEcc
Q 008311 443 ILVVLDPQGRVVSP 456 (570)
Q Consensus 443 tlVVLDpqGkVv~~ 456 (570)
+++|||++|+|+.+
T Consensus 175 ~tflID~~G~i~~~ 188 (208)
T 2f8a_A 175 EKFLVGPDGVPLRR 188 (208)
T ss_dssp CEEEECTTSCEEEE
T ss_pred eEEEEcCCCcEEEE
Confidence 99999999999875
No 27
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.65 E-value=7.4e-16 Score=139.62 Aligned_cols=108 Identities=13% Similarity=0.124 Sum_probs=82.0
Q ss_pred CcccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHH
Q 008311 329 PLVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKF 406 (570)
Q Consensus 329 pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F 406 (570)
..+.+.+|+.+++++++||+|+|+||++||++|+.++ |.++++++++ .+++||.|++ |. ..+..+.|
T Consensus 17 ~~l~~~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~------~~v~~v~v~~-d~----~~~~~~~~ 85 (165)
T 3or5_A 17 FSGVTVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWAS------RGFTFVGIAV-NE----QLPNVKNY 85 (165)
T ss_dssp CEEECTTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTT------TTEEEEEEEC-SC----CHHHHHHH
T ss_pred ceeeCCCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhcc------CCeEEEEEEC-CC----CHHHHHHH
Confidence 4456789999999999999999999999999999999 9999999962 4699999996 21 22333444
Q ss_pred HHHHcCCCceeeccccccChHHHHHHHHhC------CCCCCceEEEECCCCcEEcc
Q 008311 407 ETLQSSMPWYTVYHPTLIDRAVIRYVKDVW------HFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 407 ~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y------~V~~IPtlVVLDpqGkVv~~ 456 (570)
.+. ..++ ||.+.|.. .+.+.| ++.++|+++++|++|+++..
T Consensus 86 ~~~-~~~~-----~~~~~~~~---~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~ 132 (165)
T 3or5_A 86 MKT-QGII-----YPVMMATP---ELIRAFNGYIDGGITGIPTSFVIDASGNVSGV 132 (165)
T ss_dssp HHH-HTCC-----SCEEECCH---HHHHHHHTTSTTCSCSSSEEEEECTTSBEEEE
T ss_pred HHH-cCCC-----CceEecCH---HHHHHHhhhhccCCCCCCeEEEECCCCcEEEE
Confidence 331 2344 44444542 455556 89999999999999999864
No 28
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.65 E-value=3.3e-16 Score=143.02 Aligned_cols=106 Identities=10% Similarity=0.118 Sum_probs=85.0
Q ss_pred ccCCCCCeeeccccCCCEEEEEEec-CCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHH
Q 008311 331 VDGSTKRRVNIEVLRRKNVLLLISD-LDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFE 407 (570)
Q Consensus 331 ~~g~~G~~Vsls~LkGKvVlL~FwA-sWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~ 407 (570)
+.+.+|+.+++++++||+|+|+||+ +|||+|+.++ |.++|+++++ .+++||+|++ | +.+..+.|.
T Consensus 20 l~~~~G~~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~------~~~~vv~vs~-d-----~~~~~~~~~ 87 (163)
T 3gkn_A 20 LSLSGGTQTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDK------AGAKILGVSR-D-----SVKSHDNFC 87 (163)
T ss_dssp EECSTTCEECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHH------TTCEEEEEES-S-----CHHHHHHHH
T ss_pred ccCCCCCEEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHH------CCCEEEEEeC-C-----CHHHHHHHH
Confidence 5578999999999999999999998 9999999999 9999999973 3799999996 3 234455565
Q ss_pred HHHcCCCceeeccccccChHHHHHHHHhCCCCC------------CceEEEECCCCcEEcc
Q 008311 408 TLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKN------------KPILVVLDPQGRVVSP 456 (570)
Q Consensus 408 ~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~------------IPtlVVLDpqGkVv~~ 456 (570)
+. ..+ +||.+.|. ...+.+.|++.. +|+++|||++|+|+..
T Consensus 88 ~~-~~~-----~~~~~~d~--~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~ 140 (163)
T 3gkn_A 88 AK-QGF-----AFPLVSDG--DEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQA 140 (163)
T ss_dssp HH-HCC-----SSCEEECT--TCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEE
T ss_pred HH-hCC-----CceEEECC--cHHHHHHhCCccccccccccccCcceEEEEECCCCeEEEE
Confidence 42 233 44555564 346888999987 9999999999999874
No 29
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.64 E-value=2.8e-16 Score=152.40 Aligned_cols=118 Identities=14% Similarity=0.091 Sum_probs=87.4
Q ss_pred CCcccCCCCCeeeccccCCC-EEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHH
Q 008311 328 QPLVDGSTKRRVNIEVLRRK-NVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQK 404 (570)
Q Consensus 328 ~pl~~g~~G~~Vsls~LkGK-vVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~ 404 (570)
...+.+.+|+.+++++++|| +|+|+|||+|||+|+.++ |.++|+++++ .+++||+|++.+.. ...+.+.+
T Consensus 40 ~f~l~~~~G~~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~------~~v~vv~Vs~d~~~-~~~~d~~~ 112 (218)
T 3u5r_E 40 DFVLPDAGGNLFTLAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAG------QGLAVVAINSNDAQ-AFPEETLE 112 (218)
T ss_dssp CCCEECTTCCEECGGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTT------TTEEEEEEECSCTT-TCGGGSHH
T ss_pred CcEeECCCCCEEeHHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHh------CCcEEEEEECCccc-ccccCCHH
Confidence 34566889999999999999 599999999999999999 9999999963 46999999973210 00002233
Q ss_pred HHHHHHcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEccc
Q 008311 405 KFETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSPN 457 (570)
Q Consensus 405 ~F~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~n 457 (570)
..+++..+. .++||.+.|. ...+.+.|++.++|+++|||++|+|+.+.
T Consensus 113 ~~~~~~~~~---~~~~~~l~D~--~~~~~~~~~v~~~P~~~liD~~G~i~~~g 160 (218)
T 3u5r_E 113 RVGAEVKAY---GYGFPYLKDA--SQSVAKAYGAACTPDFFLYDRERRLVYHG 160 (218)
T ss_dssp HHHHHHHHH---TCCSCEEECT--TCHHHHHHTCCEESEEEEECTTCBEEEEE
T ss_pred HHHHHHHHh---CCCccEEECC--ccHHHHHcCCCCCCeEEEECCCCcEEEec
Confidence 333333222 2355655564 34688999999999999999999998653
No 30
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.64 E-value=8e-17 Score=148.62 Aligned_cols=109 Identities=17% Similarity=0.193 Sum_probs=80.0
Q ss_pred CCcccCCCCCeeeccccCCCEEEEEEe-cCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHH
Q 008311 328 QPLVDGSTKRRVNIEVLRRKNVLLLIS-DLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQK 404 (570)
Q Consensus 328 ~pl~~g~~G~~Vsls~LkGKvVlL~Fw-AsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~ 404 (570)
...+.+.+|+.+++++++||+|+|+|| |+|||||+.++ |.++|+++++ .+++||+||. | +.+..+
T Consensus 12 dF~l~~~~G~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~------~~~~~v~vs~-d-----~~~~~~ 79 (157)
T 4g2e_A 12 DFELPDTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQ------VNAVVLGISV-D-----PPFSNK 79 (157)
T ss_dssp CCEEEBTTSCEEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGG------CSSEEEEEES-S-----CHHHHH
T ss_pred CeEeECCCCCEEeHHHHCCCeEEEEecCCCCCCccccchhhcccccccccc------cCceEeeecc-c-----chhHHH
Confidence 344568899999999999999999999 99999999999 9999999863 5799999996 3 344555
Q ss_pred HHHHHHcCCCceeeccccccChHHHHHHHHhCCCC-----------CCceEEEECCCCcEEcc
Q 008311 405 KFETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFK-----------NKPILVVLDPQGRVVSP 456 (570)
Q Consensus 405 ~F~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~-----------~IPtlVVLDpqGkVv~~ 456 (570)
+|.+- ..++ ||.+.|.. ..+.+.||+. ..|+++|||++|+|+..
T Consensus 80 ~~~~~-~~~~-----~p~l~D~~--~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~ 134 (157)
T 4g2e_A 80 AFKEH-NKLN-----FTILSDYN--REVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYK 134 (157)
T ss_dssp HHHHH-TTCC-----SEEEECTT--SHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEE
T ss_pred HHHHH-cCCc-----EEEEEcCC--cHHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEE
Confidence 66542 3344 55555653 4688889873 46889999999999865
No 31
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.64 E-value=5.4e-17 Score=153.25 Aligned_cols=121 Identities=12% Similarity=0.153 Sum_probs=82.4
Q ss_pred CCCcccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHH
Q 008311 327 LQPLVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQK 404 (570)
Q Consensus 327 ~~pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~ 404 (570)
+...+.+.+|+.+++++++||+|+|+|||+|||||+.++ |.++|+++++ ++++||+|++.+.. .-...+.+
T Consensus 27 p~f~l~d~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~------~~~~vi~is~d~~~-~~e~~~~~ 99 (187)
T 3dwv_A 27 FDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKS------QGFTVLAFPSNQFG-GQEPGNEE 99 (187)
T ss_dssp GGSCCBBTTSCBCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGG------GTCEEEEEEBCCCS-SCSSSBTT
T ss_pred CCeEEEcCCCCEeeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhh------CCeEEEEEECcccC-CCCCCCHH
Confidence 344566789999999999999999999999999999999 9999999973 36999999972100 00011233
Q ss_pred HHHHHHcCCCceeecccccc--ChH------HHHHHH----HhCCCCCCc---eEEEECCCCcEEcc
Q 008311 405 KFETLQSSMPWYTVYHPTLI--DRA------VIRYVK----DVWHFKNKP---ILVVLDPQGRVVSP 456 (570)
Q Consensus 405 ~F~~~~~~MPW~aV~fP~l~--D~~------~~~~L~----~~y~V~~IP---tlVVLDpqGkVv~~ 456 (570)
..+++..+ -+.++||.+. |.. ..+.+. ..|++..+| +++|||++|+|+..
T Consensus 100 ~~~~~~~~--~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~ 164 (187)
T 3dwv_A 100 EIKEFVCT--KFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVER 164 (187)
T ss_dssp HHHHSCCB--CCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEE
T ss_pred HHHHHHHh--ccCCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEE
Confidence 44444331 1223444432 111 112222 445777888 99999999999876
No 32
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.63 E-value=8.2e-16 Score=135.53 Aligned_cols=110 Identities=13% Similarity=0.240 Sum_probs=84.3
Q ss_pred cccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHH
Q 008311 330 LVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFE 407 (570)
Q Consensus 330 l~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~ 407 (570)
.+.+.+|+.+++++ +||+|+|+||++||++|+.++ |.+++++++ +.+++||.|++.+ .+.+.+.++
T Consensus 19 ~l~~~~g~~~~l~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~------~~~~~~v~v~~d~-----~~~~~~~~~ 86 (145)
T 3erw_A 19 LMKTIEGEDISIPN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHP------SDSVKLVTVNLVN-----SEQNQQVVE 86 (145)
T ss_dssp EEECTTSCEEEESC-TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCC------CSSEEEEEEECGG-----GSSCHHHHH
T ss_pred eeecCCCCEEeHHH-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcC------CCCEEEEEEEccC-----CcCCHHHHH
Confidence 45678999999999 999999999999999999999 999999885 2479999999722 112334444
Q ss_pred HHHcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 408 TLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 408 ~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
++..... ++||.+.|. ...+.+.|++.++|+++++|++|+++..
T Consensus 87 ~~~~~~~---~~~~~~~d~--~~~~~~~~~v~~~P~~~lid~~G~i~~~ 130 (145)
T 3erw_A 87 DFIKANK---LTFPIVLDS--KGELMKEYHIITIPTSFLLNEKGEIEKT 130 (145)
T ss_dssp HHHHHTT---CCSCEEECS--SSHHHHHTTCCEESEEEEECTTCCEEEE
T ss_pred HHHHHcC---CceeEEEcC--chhHHHhcCcCccCeEEEEcCCCcEEEE
Confidence 4433322 234545554 2468899999999999999999999864
No 33
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.63 E-value=7e-16 Score=144.33 Aligned_cols=115 Identities=13% Similarity=0.178 Sum_probs=85.1
Q ss_pred CcccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHH
Q 008311 329 PLVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKF 406 (570)
Q Consensus 329 pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F 406 (570)
..+.+.+|+.+++++++||+|+|+|||+||++|+.++ |.+++++++ +. ++||+|++.+ .....+.+.+..
T Consensus 16 f~l~~~~G~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~------~~-~~~v~v~~d~-~~~~~~d~~~~~ 87 (188)
T 2cvb_A 16 AELPDPRGGRYRLSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYR------GK-VAFVGINAND-YEKYPEDAPEKM 87 (188)
T ss_dssp CEEECTTSCEEEGGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTT------TT-EEEEEEECCC-TTTCGGGSHHHH
T ss_pred ceeecCCCCEEeHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhh------cC-eEEEEEEcCc-cccccccCHHHH
Confidence 4456789999999999999999999999999999998 999999985 23 9999999621 100001223333
Q ss_pred HHHHcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 407 ETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 407 ~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
.++..+. .++||.+.|. ...+.+.|++.++|+++|+|++|+++..
T Consensus 88 ~~~~~~~---~~~~~~~~d~--~~~~~~~~~v~~~P~~~lid~~G~i~~~ 132 (188)
T 2cvb_A 88 AAFAEEH---GIFFPYLLDE--TQEVAKAYRALRTPEVFLFDERRLLRYH 132 (188)
T ss_dssp HHHHHHH---TCCSCEEECS--SSHHHHHTTCCEESEEEEECTTCBEEEE
T ss_pred HHHHHHh---CCCceEEECC--cchHHHHcCCCCCCeEEEECCCCcEEEE
Confidence 3333222 2345555564 2457889999999999999999999877
No 34
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.63 E-value=7.3e-16 Score=142.59 Aligned_cols=115 Identities=13% Similarity=0.150 Sum_probs=76.5
Q ss_pred CcccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCC--ChhhHH
Q 008311 329 PLVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHW--DDPTQK 404 (570)
Q Consensus 329 pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w--~D~~~~ 404 (570)
..+.+.+|+.+++++++||+|+|+|||+||+||+ ++ |.++|+++++ .+++||+|++.+...+. +.+..+
T Consensus 15 f~l~d~~G~~~~l~~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~------~~v~vv~vs~d~~~~~~~d~~~~~~ 87 (171)
T 3cmi_A 15 LAPVDKKGQPFPFDQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKD------EGFTIIGFPCNQFGHQEPGSDEEIA 87 (171)
T ss_dssp CCCBBTTSCBCCGGGGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGG------GTEEEEEEEECSCC-----------
T ss_pred eEEEcCCCCEecHHHcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhcc------CCeEEEEEECcccCCCCCCCHHHHH
Confidence 3456788999999999999999999999999999 88 9999999973 36999999972100000 111223
Q ss_pred HHH-HHHcCCCceeeccccccChH--------HHHHH-HHhCCCCCCc------eEEEECCCCcEEcc
Q 008311 405 KFE-TLQSSMPWYTVYHPTLIDRA--------VIRYV-KDVWHFKNKP------ILVVLDPQGRVVSP 456 (570)
Q Consensus 405 ~F~-~~~~~MPW~aV~fP~l~D~~--------~~~~L-~~~y~V~~IP------tlVVLDpqGkVv~~ 456 (570)
+|. + ...++ ||.+.|.+ ..+.+ .+.|++.++| +++|||++|+|+..
T Consensus 88 ~~~~~-~~~~~-----~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~ 149 (171)
T 3cmi_A 88 QFCQL-NYGVT-----FPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYER 149 (171)
T ss_dssp --------CCC-----SCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEE
T ss_pred HHHHh-ccCCC-----ceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEE
Confidence 332 2 12233 44333211 11122 3468999999 99999999999875
No 35
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.63 E-value=8.6e-16 Score=143.12 Aligned_cols=116 Identities=16% Similarity=0.118 Sum_probs=80.7
Q ss_pred CcccCC--CCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHH
Q 008311 329 PLVDGS--TKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQK 404 (570)
Q Consensus 329 pl~~g~--~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~ 404 (570)
..+.+. +|+.+++++++||+|+|+|||+||++|+.++ |.++|+++++..-+...+++||.|++ |.. +.+..+
T Consensus 40 f~l~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~-d~~---~~~~~~ 115 (183)
T 3lwa_A 40 IGGDSLMEEGTQINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINV-RDY---SRDIAQ 115 (183)
T ss_dssp CEEEBSSSTTCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEEC-SCC---CHHHHH
T ss_pred eeccccccCCcEecHHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEEC-CCC---CHHHHH
Confidence 345677 8999999999999999999999999999999 99999999741000012339999996 210 122233
Q ss_pred HHHHHHcCCCceeeccccccChHHHHHHHHhC---CCCCCceEEEECCCCcEEcc
Q 008311 405 KFETLQSSMPWYTVYHPTLIDRAVIRYVKDVW---HFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 405 ~F~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y---~V~~IPtlVVLDpqGkVv~~ 456 (570)
.|.+. ..++| |.+.|.. ..+.+.| ++.++|++++||++|+++..
T Consensus 116 ~~~~~-~~~~~-----~~~~d~~--~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 162 (183)
T 3lwa_A 116 DFVTD-NGLDY-----PSIYDPP--FMTAASLGGVPASVIPTTIVLDKQHRPAAV 162 (183)
T ss_dssp HHHHH-TTCCS-----CEEECTT--CGGGGGTTTCCTTCCSEEEEECTTSCEEEE
T ss_pred HHHHH-cCCCc-----cEEECCc--chHHHHhccCCCCCCCeEEEECCCCcEEEE
Confidence 44321 24444 4444542 2344444 68999999999999999864
No 36
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.63 E-value=6.1e-16 Score=141.31 Aligned_cols=114 Identities=11% Similarity=0.075 Sum_probs=83.1
Q ss_pred CCcccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCC----------
Q 008311 328 QPLVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHF---------- 395 (570)
Q Consensus 328 ~pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s---------- 395 (570)
...+.+.+|+.+++++++||+|+|+||++||++|+.++ |.+++++++ +++||+|++ |..
T Consensus 19 ~~~l~~~~g~~~~l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--------~v~vv~i~~-d~~~~~~~~~~~~ 89 (165)
T 3ha9_A 19 SFSLTTIDGEVISLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--------EISVIAIDF-WTAEALKALGLNK 89 (165)
T ss_dssp CCCEEBTTSCEECGGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--------TEEEEEEEC-CSHHHHHHHTCCS
T ss_pred CCEeecCCCCEeeHHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--------CcEEEEEEe-ccccccccccccc
Confidence 34466788999999999999999999999999999999 999999873 699999996 200
Q ss_pred CCC-ChhhHHHHHHHHcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEc
Q 008311 396 IHW-DDPTQKKFETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVS 455 (570)
Q Consensus 396 ~~w-~D~~~~~F~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~ 455 (570)
... ...+.+.++++..+..+- +||.+.| ...+.+.|++.++|+++|+|++|+++.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d---~~~~~~~~~v~~~P~~~lid~~G~i~~ 145 (165)
T 3ha9_A 90 PGYPPPDTPEMFRKFIANYGDP--SWIMVMD---DGSLVEKFNVRSIDYIVIMDKSSNVLY 145 (165)
T ss_dssp TTSCCCCCHHHHHHHHHHHSCT--TSEEEEC---CSHHHHHTTCCSSSEEEEEETTCCEEE
T ss_pred ccCCCCCCHHHHHHHHHHcCCC--CeeEEeC---hHHHHHHhCCCCceEEEEEcCCCcEEE
Confidence 000 002333333333222110 3444446 346889999999999999999999998
No 37
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.63 E-value=1e-15 Score=133.78 Aligned_cols=105 Identities=13% Similarity=0.047 Sum_probs=81.4
Q ss_pred CcccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHH
Q 008311 329 PLVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKF 406 (570)
Q Consensus 329 pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F 406 (570)
..+.+.+|+.+++++++||+|+|+||++||++|+.++ |.+++++++ +++++.|++.+ +.+..+.|
T Consensus 7 ~~l~~~~g~~~~l~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--------~~~~~~v~~~~-----~~~~~~~~ 73 (136)
T 1lu4_A 7 FTATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--------AVTFVGIATRA-----DVGAMQSF 73 (136)
T ss_dssp CEEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEECSS-----CHHHHHHH
T ss_pred eEeecCCCCeecHHHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--------CcEEEEEEcCC-----CHHHHHHH
Confidence 4466788999999999999999999999999999998 999988872 68999999621 23333444
Q ss_pred HHHHcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEE
Q 008311 407 ETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVV 454 (570)
Q Consensus 407 ~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv 454 (570)
.+. ..++ ||.+.|. ...+.+.|++.++|+++++|++|+++
T Consensus 74 ~~~-~~~~-----~~~~~d~--~~~~~~~~~i~~~P~~~lid~~G~i~ 113 (136)
T 1lu4_A 74 VSK-YNLN-----FTNLNDA--DGVIWARYNVPWQPAFVFYRADGTST 113 (136)
T ss_dssp HHH-HTCC-----SEEEECT--TSHHHHHTTCCSSSEEEEECTTSCEE
T ss_pred HHH-cCCC-----ceEEECC--chhHHHhcCCCCCCEEEEECCCCcEE
Confidence 332 2334 4444453 24678899999999999999999998
No 38
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.62 E-value=7.7e-16 Score=137.95 Aligned_cols=109 Identities=13% Similarity=0.177 Sum_probs=85.2
Q ss_pred cccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHH
Q 008311 330 LVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFE 407 (570)
Q Consensus 330 l~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~ 407 (570)
.+.+.+|+.+++++++||+|+|+||++||++|+.++ |.+++++++ +.++.|++|++ |. ..+..++|.
T Consensus 14 ~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~------~~~~~~v~v~~-d~----~~~~~~~~~ 82 (152)
T 2lja_A 14 SYPDINGKTVSLADLKGKYIYIDVWATWCGPCRGELPALKELEEKYA------GKDIHFVSLSC-DK----NKKAWENMV 82 (152)
T ss_dssp EEEETTTEEEESTTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHST------TSSEEEEEEEC-CS----CHHHHHHHH
T ss_pred EeecCCCCEeeHHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhc------cCCeEEEEEEc-cC----cHHHHHHHH
Confidence 566789999999999999999999999999999998 999999885 34799999996 21 222333443
Q ss_pred HHHcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 408 TLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 408 ~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
+ ....+|+.+.. |. ...+.+.|++.++|+++++|++|+++..
T Consensus 83 ~-~~~~~~~~~~~----d~--~~~~~~~~~v~~~P~~~lid~~G~i~~~ 124 (152)
T 2lja_A 83 T-KDQLKGIQLHM----GT--DRTFMDAYLINGIPRFILLDRDGKIISA 124 (152)
T ss_dssp H-HHTCCSEEEEC----SS--CTHHHHHTTCCSSCCEEEECTTSCEEES
T ss_pred H-hcCCCCceeec----Cc--chhHHHHcCcCCCCEEEEECCCCeEEEc
Confidence 3 23566654443 43 3468889999999999999999999875
No 39
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.62 E-value=7.6e-16 Score=150.15 Aligned_cols=110 Identities=16% Similarity=0.148 Sum_probs=84.3
Q ss_pred CCCCCeeeccccCCCEEEEEEec-CCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHH
Q 008311 333 GSTKRRVNIEVLRRKNVLLLISD-LDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETL 409 (570)
Q Consensus 333 g~~G~~Vsls~LkGKvVlL~FwA-sWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~ 409 (570)
+.+|+.+++++++||+|+|+||| +||++|+.++ |.++|+++++ ++++||+|++ | +.++.+.|.+.
T Consensus 56 d~~G~~v~l~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~------~~v~vv~Is~-D-----~~~~~~~~~~~ 123 (222)
T 3ztl_A 56 NGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNS------RNCQVIACST-D-----SQYSHLAWDNL 123 (222)
T ss_dssp TTEEEEEEGGGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHT------TTEEEEEEES-S-----CHHHHHHHHHS
T ss_pred CCCCcEEeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHH------CCCEEEEEEC-C-----CHHHHHHHHHH
Confidence 33559999999999999999997 9999999999 9999999973 4799999996 3 24455566543
Q ss_pred Hc-CCCceeeccccccChHHHHHHHHhCCCC------CCceEEEECCCCcEEcc
Q 008311 410 QS-SMPWYTVYHPTLIDRAVIRYVKDVWHFK------NKPILVVLDPQGRVVSP 456 (570)
Q Consensus 410 ~~-~MPW~aV~fP~l~D~~~~~~L~~~y~V~------~IPtlVVLDpqGkVv~~ 456 (570)
.. ...-..++||.+.|.. ..+.+.|++. .+|+++|||++|+|+..
T Consensus 124 ~~~~~~~~~~~~~~l~D~~--~~~~~~ygv~~~~~g~~~P~~~lID~~G~I~~~ 175 (222)
T 3ztl_A 124 DRKSGGLGHMKIPLLADRK--QEISKAYGVFDEEDGNAFRGLFIIDPNGILRQI 175 (222)
T ss_dssp CGGGTSCCSCSSCEEECSS--SHHHHHTTCBCTTTSSBCEEEEEECTTSEEEEE
T ss_pred hhhhccccccceeEEeCCc--hHHHHHcCCeecCCCCccceEEEECCCCeEEEE
Confidence 21 1011134455555642 4688899998 89999999999999876
No 40
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.61 E-value=9.4e-16 Score=139.57 Aligned_cols=106 Identities=10% Similarity=0.065 Sum_probs=82.6
Q ss_pred CcccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHH
Q 008311 329 PLVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKF 406 (570)
Q Consensus 329 pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F 406 (570)
..+.+.+|+.+++++++||+|+|+||++||++|+.++ |.+++++++ +.+++||.|++ | .+.+.|
T Consensus 24 f~l~~~~g~~~~l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~------~~~~~~v~v~~-d-------~~~~~~ 89 (158)
T 3hdc_A 24 FKLPTLSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFP------KGDLVVLAVNV-E-------KRFPEK 89 (158)
T ss_dssp CEEECTTSCEEESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSS------TTSEEEEEEEC-S-------SSCCGG
T ss_pred ceeEcCCCCEEehHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcc------cCCeEEEEEeC-C-------HHHHHH
Confidence 3456789999999999999999999999999999999 999999985 24799999986 2 222222
Q ss_pred HHHHcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 407 ETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 407 ~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
.+ ...++ ||.+.|. ...+.+.|++.++|+++++|++|+++..
T Consensus 90 ~~-~~~~~-----~~~~~d~--~~~~~~~~~v~~~P~~~lid~~G~i~~~ 131 (158)
T 3hdc_A 90 YR-RAPVS-----FNFLSDA--TGQVQQRYGANRLPDTFIVDRKGIIRQR 131 (158)
T ss_dssp GG-GCCCS-----CEEEECT--TSHHHHHTTCCSSSEEEEECTTSBEEEE
T ss_pred HH-HcCCC-----ceEEECc--hHHHHHHhCCCCcceEEEEcCCCCEEEE
Confidence 21 12333 4444454 3468899999999999999999999875
No 41
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.61 E-value=1.4e-15 Score=141.72 Aligned_cols=111 Identities=19% Similarity=0.204 Sum_probs=82.3
Q ss_pred CcccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHH
Q 008311 329 PLVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKF 406 (570)
Q Consensus 329 pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F 406 (570)
..+.+.+|+.+++++++||+|+|+||++||++|+.++ |.++|++++ +.+++||+|++ |.. +.+..+.|
T Consensus 43 f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~------~~~~~vv~v~~-d~~---~~~~~~~~ 112 (186)
T 1jfu_A 43 LAFEDADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLS------GPNFEVVAINI-DTR---DPEKPKTF 112 (186)
T ss_dssp CEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHC------BTTEEEEEEEC-CCS---CTTHHHHH
T ss_pred cEeEcCCCCEeeHHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhc------cCCcEEEEEEC-CCC---CHHHHHHH
Confidence 4456889999999999999999999999999999999 999999995 24799999997 311 12334455
Q ss_pred HHHHcCCCceeeccccccChHHHHHHHHhCCCC----CCceEEEECCCCcEEcc
Q 008311 407 ETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFK----NKPILVVLDPQGRVVSP 456 (570)
Q Consensus 407 ~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~----~IPtlVVLDpqGkVv~~ 456 (570)
.+. ...++ ||.+.|.. ..+.+.|++. ++|+++|||++|+|+..
T Consensus 113 ~~~-~~~~~----~~~~~d~~--~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~ 159 (186)
T 1jfu_A 113 LKE-ANLTR----LGYFNDQK--AKVFQDLKAIGRALGMPTSVLVDPQGCEIAT 159 (186)
T ss_dssp HHH-TTCCT----TCCEECTT--CHHHHHHHTTTCCSSSSEEEEECTTSBEEEE
T ss_pred HHH-cCCCC----CceEECCc--chHHHHhccccccCCCCEEEEECCCCCEEEE
Confidence 432 22222 23333542 3456667764 99999999999999875
No 42
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.61 E-value=1.3e-15 Score=143.26 Aligned_cols=107 Identities=9% Similarity=0.073 Sum_probs=84.1
Q ss_pred cccCCCCCeeeccccCCCEEEEEEe-cCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHH
Q 008311 330 LVDGSTKRRVNIEVLRRKNVLLLIS-DLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKF 406 (570)
Q Consensus 330 l~~g~~G~~Vsls~LkGKvVlL~Fw-AsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F 406 (570)
.+.+.+|+.+++++++||+|+|+|| |+||++|+.++ |.++|+++++ .+++||+|+. | +.+..+.|
T Consensus 35 ~l~~~~G~~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~------~~~~vv~Vs~-D-----~~~~~~~~ 102 (179)
T 3ixr_A 35 PLMLSGSTCKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQ------INATVLGVSR-D-----SVKSHDSF 102 (179)
T ss_dssp CEEEGGGEEECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHT------TTEEEEEEES-C-----CHHHHHHH
T ss_pred eEECCCCCEEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHH------CCCEEEEEcC-C-----CHHHHHHH
Confidence 3556789999999999999999999 99999999999 9999999973 4799999996 3 34455566
Q ss_pred HHHHcCCCceeeccccccChHHHHHHHHhCCCCC------------CceEEEECCCCcEEcc
Q 008311 407 ETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKN------------KPILVVLDPQGRVVSP 456 (570)
Q Consensus 407 ~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~------------IPtlVVLDpqGkVv~~ 456 (570)
.+. ..+ +||.+.|. ...+.+.|++.. .|+++|||++|+|+..
T Consensus 103 ~~~-~~~-----~f~~l~D~--~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~ 156 (179)
T 3ixr_A 103 CAK-QGF-----TFPLVSDS--DAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEA 156 (179)
T ss_dssp HHH-HTC-----CSCEEECT--TCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEE
T ss_pred HHH-cCC-----ceEEEECC--chHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEE
Confidence 542 233 45555564 246788898853 6999999999999875
No 43
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.61 E-value=1.2e-15 Score=136.84 Aligned_cols=112 Identities=11% Similarity=0.113 Sum_probs=84.6
Q ss_pred CCCcccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHH
Q 008311 327 LQPLVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQK 404 (570)
Q Consensus 327 ~~pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~ 404 (570)
+...+.+.+|+.+++++++||+|+|+||++||++|+.++ |.++++++++ .++.|++|++ |.+ +.+..+
T Consensus 9 p~~~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~------~~~~vv~v~~-~~~---~~~~~~ 78 (153)
T 2l5o_A 9 PAFSLPDLHGKTVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKN------KNFQVLAVAQ-PID---PIESVR 78 (153)
T ss_dssp CSCEEECTTSCEEEHHHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGG------TTEEEEEEEC-TTS---CHHHHH
T ss_pred CCcEeecCCCCCccHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhcc------CCeEEEEEec-CCC---CHHHHH
Confidence 344566789999999999999999999999999999999 9999999863 4699999986 211 223334
Q ss_pred HHHHHHcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 405 KFETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 405 ~F~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
.|.+ ...++| |.+.|. ...+.+.|++.++|+++++|++|+++..
T Consensus 79 ~~~~-~~~~~~-----~~~~d~--~~~~~~~~~i~~~P~~~lid~~G~i~~~ 122 (153)
T 2l5o_A 79 QYVK-DYGLPF-----TVMYDA--DKAVGQAFGTQVYPTSVLIGKKGEILKT 122 (153)
T ss_dssp HHHH-HTTCCS-----EEEECS--SCHHHHHHTCCSSSEEEEECSSSCCCEE
T ss_pred HHHH-HcCCCc-----eEEcCc--hHHHHHHcCCCccCeEEEECCCCcEEEE
Confidence 4433 123443 333343 2457889999999999999999999754
No 44
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.61 E-value=9.4e-16 Score=139.35 Aligned_cols=111 Identities=19% Similarity=0.127 Sum_probs=85.0
Q ss_pred CCcccCCCCCeeeccccCCC-EEEEEEe-cCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhH
Q 008311 328 QPLVDGSTKRRVNIEVLRRK-NVLLLIS-DLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQ 403 (570)
Q Consensus 328 ~pl~~g~~G~~Vsls~LkGK-vVlL~Fw-AsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~ 403 (570)
...+.+.+|+.+++++++|| +|+|+|| |+||++|+.++ |.++|++++ +.+++||+|++ | +.+..
T Consensus 17 ~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~------~~~~~vv~is~-d-----~~~~~ 84 (160)
T 1xvw_A 17 DFTLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFE------NDDSAALAISV-G-----PPPTH 84 (160)
T ss_dssp CCEEECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTS------SSSEEEEEEES-C-----CHHHH
T ss_pred CeEeEcCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHH------HCCcEEEEEeC-C-----CHHHH
Confidence 34456789999999999998 9999998 99999999999 999999885 24799999996 3 23344
Q ss_pred HHHHHHHcCCCceeeccccccChHHHHHHHHhCCCC----CCc--eEEEECCCCcEEcc
Q 008311 404 KKFETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFK----NKP--ILVVLDPQGRVVSP 456 (570)
Q Consensus 404 ~~F~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~----~IP--tlVVLDpqGkVv~~ 456 (570)
+.|.+. ... +||.+.|......+.+.|++. ++| +++|+|++|+|+..
T Consensus 85 ~~~~~~-~~~-----~~~~~~d~~~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~i~~~ 137 (160)
T 1xvw_A 85 KIWATQ-SGF-----TFPLLSDFWPHGAVSQAYGVFNEQAGIANRGTFVVDRSGIIRFA 137 (160)
T ss_dssp HHHHHH-HTC-----CSCEEECTTTTTHHHHHTTCEETTTTEECSEEEEECTTSBEEEE
T ss_pred HHHHHh-cCC-----CceEEecCCcChHHHHHcCCccccCCCeeeeEEEECCCCeEEEE
Confidence 445432 222 345455631124578899998 999 99999999999875
No 45
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.61 E-value=9.3e-16 Score=150.35 Aligned_cols=116 Identities=13% Similarity=0.079 Sum_probs=86.5
Q ss_pred CCcccCC--CC--Ceeecccc-CCCEEEEEEe-cCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCC
Q 008311 328 QPLVDGS--TK--RRVNIEVL-RRKNVLLLIS-DLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWD 399 (570)
Q Consensus 328 ~pl~~g~--~G--~~Vsls~L-kGKvVlL~Fw-AsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~ 399 (570)
...+.+. +| +.++++++ +||+|+|+|| |+|||+|+.++ |.++|+++++ .+++||+||+ | +
T Consensus 33 ~F~l~~~~~~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~------~~v~vv~Is~-D-----~ 100 (221)
T 2c0d_A 33 NFTAQGLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFEN------KNVELLGISV-D-----S 100 (221)
T ss_dssp CCEEEEECTTSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHH------TTEEEEEEES-S-----C
T ss_pred CeEEeccccCCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHH------CCCEEEEEeC-C-----C
Confidence 3344555 78 89999999 9999999999 99999999999 9999999973 4799999996 3 2
Q ss_pred hhhHHHHHHHHcCCCce-eeccccccChHHHHHHHHhCCC-----CCCceEEEECCCCcEEccc
Q 008311 400 DPTQKKFETLQSSMPWY-TVYHPTLIDRAVIRYVKDVWHF-----KNKPILVVLDPQGRVVSPN 457 (570)
Q Consensus 400 D~~~~~F~~~~~~MPW~-aV~fP~l~D~~~~~~L~~~y~V-----~~IPtlVVLDpqGkVv~~n 457 (570)
.+..+.|.+.....+-+ .++||.+.|. ...+.+.|++ ..+|+++|||++|+|+...
T Consensus 101 ~~~~~~~~~~~~~~~g~~~~~fp~l~D~--~~~~~~~ygv~~~~g~~~P~~~lID~~G~I~~~~ 162 (221)
T 2c0d_A 101 VYSHLAWKNMPIEKGGIGNVEFTLVSDI--NKDISKNYNVLYDNSFALRGLFIIDKNGCVRHQT 162 (221)
T ss_dssp HHHHHHHHHSCGGGTCCCSCSSEEEECT--TSHHHHHTTCEETTTEECEEEEEECTTSBEEEEE
T ss_pred HHHHHHHHHHhhhhcCccCCceEEEECC--chHHHHHcCCcccCCCccceEEEECCCCeEEEEE
Confidence 33445555422110101 2345555564 3468889999 4799999999999999763
No 46
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.60 E-value=3.3e-15 Score=146.28 Aligned_cols=121 Identities=11% Similarity=-0.015 Sum_probs=79.2
Q ss_pred CcccCCC-CCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCC--CCCChhhH
Q 008311 329 PLVDGST-KRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHF--IHWDDPTQ 403 (570)
Q Consensus 329 pl~~g~~-G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s--~~w~D~~~ 403 (570)
..+.+.+ |+.+++++++||+|+|+|||+|||||+ ++ |+++|+++++ ++++||+||..+-. ...+.+..
T Consensus 38 F~l~d~~~G~~v~Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~------~g~~Vlgvs~d~f~~~e~~~~~~i 110 (215)
T 2i3y_A 38 YEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKP------YGLVVLGFPCNQFGKQEPGDNKEI 110 (215)
T ss_dssp CEEEBSSSSCEEEGGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGG------GTEEEEEEECCCSTTCCCSCHHHH
T ss_pred cEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhcc------CCeEEEEEEccccCcCCCCCHHHH
Confidence 3456788 999999999999999999999999999 88 9999999973 37999999963110 00122334
Q ss_pred HHHHHHHcCCCceeeccccccCh--------HHHHHHHHhC-------C--------------CCCCceEEEECCCCcEE
Q 008311 404 KKFETLQSSMPWYTVYHPTLIDR--------AVIRYVKDVW-------H--------------FKNKPILVVLDPQGRVV 454 (570)
Q Consensus 404 ~~F~~~~~~MPW~aV~fP~l~D~--------~~~~~L~~~y-------~--------------V~~IPtlVVLDpqGkVv 454 (570)
++|.++...-.=+.++||.+.|. +..+.+.... + ++..|+++|||++|+|+
T Consensus 111 ~~f~~~~~~~~~~~~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G~vv 190 (215)
T 2i3y_A 111 LPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPV 190 (215)
T ss_dssp HHHHHHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTSCEE
T ss_pred HHHHHhccchhccCccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCCeEE
Confidence 45544210000134456654321 1123343321 1 23348999999999998
Q ss_pred cc
Q 008311 455 SP 456 (570)
Q Consensus 455 ~~ 456 (570)
.+
T Consensus 191 ~~ 192 (215)
T 2i3y_A 191 MR 192 (215)
T ss_dssp EE
T ss_pred EE
Confidence 76
No 47
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.60 E-value=6.5e-15 Score=134.16 Aligned_cols=118 Identities=15% Similarity=0.160 Sum_probs=79.6
Q ss_pred CcccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccC-C-CCCChhhHH
Q 008311 329 PLVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDH-F-IHWDDPTQK 404 (570)
Q Consensus 329 pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~-s-~~w~D~~~~ 404 (570)
..+.+.+|+.+++++++||+|+|+|||+|||+|+.++ |.++|+++++ ++++||+|++.+. . ..++.+..+
T Consensus 14 f~l~~~~G~~~~l~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~------~~~~vv~v~~d~~~~~~~~~~~~~~ 87 (169)
T 2v1m_A 14 FTVKDINGVDVSLEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVG------KGLRILAFPCNQFGGQEPWAEAEIK 87 (169)
T ss_dssp CEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTEEEEEEECCCSTTCCCSCHHHHH
T ss_pred ceeecCCCCCccHHHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhc------CCeEEEEEECCccCCCCCCCHHHHH
Confidence 3456789999999999999999999999999999999 9999999963 3699999997210 0 011233445
Q ss_pred HH-HHHHcCCCceeeccccccChH------HHHHHH-HhCC-----CCCCceEEEECCCCcEEcc
Q 008311 405 KF-ETLQSSMPWYTVYHPTLIDRA------VIRYVK-DVWH-----FKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 405 ~F-~~~~~~MPW~aV~fP~l~D~~------~~~~L~-~~y~-----V~~IPtlVVLDpqGkVv~~ 456 (570)
.| .+. ...+|..+.. .|.. ..+.+. ..++ ++.+|+++|||++|+++..
T Consensus 88 ~~~~~~-~~~~~~~~~~---~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~ 148 (169)
T 2v1m_A 88 KFVTEK-YGVQFDMFSK---IKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKR 148 (169)
T ss_dssp HHHHHH-HCCCSEEBCC---CCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEE
T ss_pred HHHHHh-cCCCCceEEE---EeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEE
Confidence 55 221 2334322210 1211 112222 2235 5667999999999999875
No 48
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.60 E-value=1.2e-15 Score=147.84 Aligned_cols=109 Identities=15% Similarity=0.074 Sum_probs=82.5
Q ss_pred CCCeeeccccCCCEEEEEEe-cCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHc
Q 008311 335 TKRRVNIEVLRRKNVLLLIS-DLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQS 411 (570)
Q Consensus 335 ~G~~Vsls~LkGKvVlL~Fw-AsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~ 411 (570)
+|+.+++++++||+|+|+|| |+|||+|+.++ |.++|+++++ .+++||+||+ | +.+..+.|.+...
T Consensus 37 ~g~~v~l~d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~------~~v~vv~Is~-D-----~~~~~~~~~~~~~ 104 (211)
T 2pn8_A 37 EFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRS------INTEVVACSV-D-----SQFTHLAWINTPR 104 (211)
T ss_dssp EEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHT------TTEEEEEEES-S-----CHHHHHHHHTSCG
T ss_pred CCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH------CCCEEEEEEC-C-----CHHHHHHHHHHhh
Confidence 56899999999999999999 99999999999 9999999963 4799999996 3 2333444543211
Q ss_pred CC-CceeeccccccChHHHHHHHHhCCCC------CCceEEEECCCCcEEccc
Q 008311 412 SM-PWYTVYHPTLIDRAVIRYVKDVWHFK------NKPILVVLDPQGRVVSPN 457 (570)
Q Consensus 412 ~M-PW~aV~fP~l~D~~~~~~L~~~y~V~------~IPtlVVLDpqGkVv~~n 457 (570)
+. ..-.++||.+.|. ...+.+.|++. .+|+++|||++|+|+...
T Consensus 105 ~~~g~~~~~fp~l~D~--~~~~~~~ygv~~~~~g~~~p~~~lID~~G~I~~~~ 155 (211)
T 2pn8_A 105 RQGGLGPIRIPLLSDL--THQISKDYGVYLEDSGHTLRGLFIIDDKGILRQIT 155 (211)
T ss_dssp GGTCCCSCSSCEEECT--TSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred hccCccCCceEEEECC--chHHHHHcCCcccCCCcccceEEEECCCCEEEEEE
Confidence 00 0003456666674 35688899994 699999999999998763
No 49
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.60 E-value=2.2e-15 Score=133.19 Aligned_cols=109 Identities=13% Similarity=0.165 Sum_probs=81.2
Q ss_pred CCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHH
Q 008311 333 GSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQ 410 (570)
Q Consensus 333 g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~ 410 (570)
+.+|+.+++++++||+|+|+||++||++|+.++ |.++++++++ +++|++|++.+.. .+.+.+.+.++.
T Consensus 16 ~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~-------~~~~~~v~~~~~~---~~~~~~~~~~~~ 85 (148)
T 2b5x_A 16 WLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQD-------QLNVVAVHMPRSE---DDLDPGKIKETA 85 (148)
T ss_dssp EESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-------TSEEEEEECCCST---TTSSHHHHHHHH
T ss_pred cccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcC-------CcEEEEEEcCCCc---cccCHHHHHHHH
Confidence 458999999999999999999999999999999 9999999852 3999999962211 111233344433
Q ss_pred cCCCceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 411 SSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 411 ~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
.+.. ++||.+.|. ...+.+.|++.++|+++++|++|+++..
T Consensus 86 ~~~~---~~~~~~~d~--~~~~~~~~~v~~~P~~~lid~~G~i~~~ 126 (148)
T 2b5x_A 86 AEHD---ITQPIFVDS--DHALTDAFENEYVPAYYVFDKTGQLRHF 126 (148)
T ss_dssp HHTT---CCSCEEECS--SCHHHHHTCCCCSSEEEEECTTCBEEEE
T ss_pred HHcC---CCcceEECC--chhHHHHhCCCCCCEEEEECCCCcEEEE
Confidence 3222 234444453 2458889999999999999999999874
No 50
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.60 E-value=7e-16 Score=146.46 Aligned_cols=114 Identities=10% Similarity=0.070 Sum_probs=88.9
Q ss_pred cccCC--CCC---eeecccc-CCCEEEEEEe-cCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCCh
Q 008311 330 LVDGS--TKR---RVNIEVL-RRKNVLLLIS-DLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDD 400 (570)
Q Consensus 330 l~~g~--~G~---~Vsls~L-kGKvVlL~Fw-AsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D 400 (570)
.+.+. +|+ .++++++ +||+|+|+|| |+||+||+.++ |.++|+++++ .+++||+|++ | ..
T Consensus 11 ~l~~~~~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~------~~v~vv~Is~-d-----~~ 78 (198)
T 1zof_A 11 KAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHE------KGFNVIGVSI-D-----SE 78 (198)
T ss_dssp EEEEECTTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHH------TTEEEEEEES-S-----CH
T ss_pred EeecccCCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHH------cCCEEEEEEC-C-----CH
Confidence 34555 788 9999999 9999999999 99999999999 9999999973 3799999996 3 23
Q ss_pred hhHHHHHH-HHcCCCceeeccccccChHHHHHHHHhCCCC-----CCceEEEECCCCcEEccc
Q 008311 401 PTQKKFET-LQSSMPWYTVYHPTLIDRAVIRYVKDVWHFK-----NKPILVVLDPQGRVVSPN 457 (570)
Q Consensus 401 ~~~~~F~~-~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~-----~IPtlVVLDpqGkVv~~n 457 (570)
+..+.|.+ +.....|+.++||.+.|. ...+.+.|++. ++|+++|||++|+|+...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~d~--~~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~ 139 (198)
T 1zof_A 79 QVHFAWKNTPVEKGGIGQVSFPMVADI--TKSISRDYDVLFEEAIALRGAFLIDKNMKVRHAV 139 (198)
T ss_dssp HHHHHHHTSCGGGTCCCCCSSCEEECT--TSHHHHHTTCEETTTEECEEEEEEETTTEEEEEE
T ss_pred HHHHHHHHhhhhcccccCceeEEEECC--chHHHHHhCCcccCCcccceEEEECCCCEEEEEE
Confidence 33444433 122234556677776674 35688899999 999999999999998763
No 51
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.60 E-value=6.7e-15 Score=134.19 Aligned_cols=117 Identities=15% Similarity=0.275 Sum_probs=79.7
Q ss_pred CcccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCC-CC-CChhhHH
Q 008311 329 PLVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHF-IH-WDDPTQK 404 (570)
Q Consensus 329 pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s-~~-w~D~~~~ 404 (570)
..+.+.+|+.+++++++||+|+|+|||+||++|+.++ |.++|+++++ .+++||+|++.+.. .+ .+.+..+
T Consensus 15 f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~------~~~~vv~vs~d~~~~~~~~~~~~~~ 88 (170)
T 2p5q_A 15 FTVKDAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKD------QGLEILAFPCNQFGEEEPGTNDQIT 88 (170)
T ss_dssp CEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTEEEEEEECCTTTTCCCSCHHHHH
T ss_pred eEEEcCCCCEecHHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhcc------CCEEEEEEECCCCCCCCCCCHHHHH
Confidence 4456789999999999999999999999999999999 9999999973 36999999972100 00 0223334
Q ss_pred HHHHHHcCCCceeeccccc--cChH------HHHHHH-HhCCC--CCCc---eEEEECCCCcEEcc
Q 008311 405 KFETLQSSMPWYTVYHPTL--IDRA------VIRYVK-DVWHF--KNKP---ILVVLDPQGRVVSP 456 (570)
Q Consensus 405 ~F~~~~~~MPW~aV~fP~l--~D~~------~~~~L~-~~y~V--~~IP---tlVVLDpqGkVv~~ 456 (570)
.|.+....++ ||.+ .|.. ..+.+. +.+++ .++| +++|||++|+|+..
T Consensus 89 ~~~~~~~~~~-----~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~ 149 (170)
T 2p5q_A 89 DFVCTRFKSE-----FPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDR 149 (170)
T ss_dssp HHHHHHTCCC-----SCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEE
T ss_pred HHHHHhcCCC-----ceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEe
Confidence 4433112333 3333 1221 111121 23567 7889 99999999999875
No 52
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.59 E-value=2.2e-15 Score=138.69 Aligned_cols=108 Identities=11% Similarity=0.046 Sum_probs=82.3
Q ss_pred CcccCCCCCeeeccccCCCEEEEEEec-CCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHH
Q 008311 329 PLVDGSTKRRVNIEVLRRKNVLLLISD-LDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKK 405 (570)
Q Consensus 329 pl~~g~~G~~Vsls~LkGKvVlL~FwA-sWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~ 405 (570)
..+.+.+|+.+++++++||+|+|+||+ +||++|+.++ |.++|+++ . +++||+||+ | +.+..+.
T Consensus 25 f~l~~~~G~~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~-------~v~vv~is~-d-----~~~~~~~ 90 (163)
T 1psq_A 25 FSLTTTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-D-------NTVVLTVSM-D-----LPFAQKR 90 (163)
T ss_dssp CEEECTTSCEEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T-------TEEEEEEES-S-----CHHHHHH
T ss_pred EEEEcCCCcEeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-C-------CcEEEEEEC-C-----CHHHHHH
Confidence 445678999999999999999999995 9999999999 99998877 2 599999996 3 2344555
Q ss_pred HHHHHcCCCceeeccccccC-hHHHHHHHHhCCCC----CC--ceEEEECCCCcEEccc
Q 008311 406 FETLQSSMPWYTVYHPTLID-RAVIRYVKDVWHFK----NK--PILVVLDPQGRVVSPN 457 (570)
Q Consensus 406 F~~~~~~MPW~aV~fP~l~D-~~~~~~L~~~y~V~----~I--PtlVVLDpqGkVv~~n 457 (570)
|.+. ...+ +||.+.| . ...+.+.|++. ++ |+++|||++|+|+...
T Consensus 91 ~~~~-~~~~----~~~~l~D~~--~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~ 142 (163)
T 1psq_A 91 WCGA-EGLD----NAIMLSDYF--DHSFGRDYALLINEWHLLARAVFVLDTDNTIRYVE 142 (163)
T ss_dssp HHHH-HTCT----TSEEEECTT--TCHHHHHHTCBCTTTCSBCCEEEEECTTCBEEEEE
T ss_pred HHHh-cCCC----CcEEecCCc--hhHHHHHhCCccccCCceEEEEEEEcCCCeEEEEE
Confidence 6542 2330 3444445 3 24678889987 44 9999999999998763
No 53
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.59 E-value=5.9e-15 Score=137.61 Aligned_cols=118 Identities=15% Similarity=0.115 Sum_probs=85.2
Q ss_pred CcccCCCCCeeeccccCCCEEEEEEecCCCH-HhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHH
Q 008311 329 PLVDGSTKRRVNIEVLRRKNVLLLISDLDIS-QEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKK 405 (570)
Q Consensus 329 pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCp-PCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~ 405 (570)
..+.+.+|+.+++++++||+|+|+||++||| +|..++ |.++|+++++ .+.+++||+||+ |.. + +.+..++
T Consensus 11 f~l~d~~G~~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~----~~~~~~vv~is~-d~~-d-~~~~~~~ 83 (170)
T 3me7_A 11 ITLVDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGT----PGKDFWVITFTF-DPK-D-TLEDIKR 83 (170)
T ss_dssp CEEEETTCCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCC----BTTTBEEEEEEC-CTT-C-CHHHHHH
T ss_pred eEEEcCCcCEEchHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhh----cCCceEEEEEEC-CCC-C-CHHHHHH
Confidence 3567889999999999999999999999997 699999 9999999963 246799999997 321 1 2334455
Q ss_pred HHHHH-cCC-CceeeccccccChHHHHHHHHhCCC---------CCCceEEEECCCCcEEcc
Q 008311 406 FETLQ-SSM-PWYTVYHPTLIDRAVIRYVKDVWHF---------KNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 406 F~~~~-~~M-PW~aV~fP~l~D~~~~~~L~~~y~V---------~~IPtlVVLDpqGkVv~~ 456 (570)
|.+.. ... .|.-+. ..+.+....+.+.||+ ...|+++|||++|+|+..
T Consensus 84 ~~~~~~~~~~~w~~l~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~ 142 (170)
T 3me7_A 84 FQKEYGIDGKGWKVVK---AKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDY 142 (170)
T ss_dssp HHHHTTCCSSSEEEEE---ESSHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEE
T ss_pred HHHHcCCCCCCeEEEe---CCCHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEE
Confidence 54322 122 243211 1144456778888774 457899999999999864
No 54
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.59 E-value=6.4e-15 Score=140.82 Aligned_cols=117 Identities=11% Similarity=0.101 Sum_probs=83.8
Q ss_pred CCcccCCCCCeeeccccCCCEEEEEEecCCCHH-hHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHH
Q 008311 328 QPLVDGSTKRRVNIEVLRRKNVLLLISDLDISQ-EELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQK 404 (570)
Q Consensus 328 ~pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpP-Cr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~ 404 (570)
...+.+.+|+.+++++++||+|+|+|||+||+| |+.++ |.++|+++++. .+.+++||+|++ |.. .| ..+
T Consensus 23 ~f~l~d~~G~~v~l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~---~~~~v~vv~Is~-D~~---~d-~~~ 94 (200)
T 2b7k_A 23 PFHLEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSK---YGITLQPLFITC-DPA---RD-SPA 94 (200)
T ss_dssp CCEEEETTSCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHH---HCCCCEEEEEES-CTT---TC-CHH
T ss_pred CEEEEcCCCCEEeHHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHh---hCCceEEEEEEC-CCC---CC-CHH
Confidence 344567899999999999999999999999998 99999 99999999741 135799999997 321 01 223
Q ss_pred HHHHHHc--CCCceeeccccccChHHHHHHHHhCCCC-CCc---------------eEEEECCCCcEEcc
Q 008311 405 KFETLQS--SMPWYTVYHPTLIDRAVIRYVKDVWHFK-NKP---------------ILVVLDPQGRVVSP 456 (570)
Q Consensus 405 ~F~~~~~--~MPW~aV~fP~l~D~~~~~~L~~~y~V~-~IP---------------tlVVLDpqGkVv~~ 456 (570)
..+++.. ..+|..++. +.+....+.+.|++. ++| +++|||++|+|+..
T Consensus 95 ~~~~~~~~~~~~~~~l~~----~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~ 160 (200)
T 2b7k_A 95 VLKEYLSDFHPSILGLTG----TFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDA 160 (200)
T ss_dssp HHHHHHTTSCTTCEEEEC----CHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEE
T ss_pred HHHHHHHHcCCCceEEeC----CHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEE
Confidence 3344433 345655542 223456788889987 454 88999999999865
No 55
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.59 E-value=6.8e-16 Score=145.84 Aligned_cols=117 Identities=14% Similarity=0.127 Sum_probs=81.9
Q ss_pred CCcccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccC--CCCCChhhH
Q 008311 328 QPLVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDH--FIHWDDPTQ 403 (570)
Q Consensus 328 ~pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~--s~~w~D~~~ 403 (570)
...+.+.+|+.+++++++||+|+|+|||+|||+|+.++ |.++|+++++ .+++||+|++.+. ....+.+..
T Consensus 30 ~f~l~~~~G~~~~l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~------~~v~vv~vs~d~~~~~~~~~~~~~ 103 (190)
T 2vup_A 30 DFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKS------QGFTVLAFPCNQFGGQEPGNEEEI 103 (190)
T ss_dssp GSCCBBTTSSBCCGGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTCEEEEEECCCSTTCCCSCHHHH
T ss_pred CeEEEcCCCCEEEHHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhc------CCeEEEEEEcCccCCCCCCCHHHH
Confidence 34456789999999999999999999999999999999 9999999973 3699999997210 000123334
Q ss_pred HHHH-HHHcCCCceeecccccc--ChH------HHHHH-HHhCCCCCCc------eEEEECCCCcEEcc
Q 008311 404 KKFE-TLQSSMPWYTVYHPTLI--DRA------VIRYV-KDVWHFKNKP------ILVVLDPQGRVVSP 456 (570)
Q Consensus 404 ~~F~-~~~~~MPW~aV~fP~l~--D~~------~~~~L-~~~y~V~~IP------tlVVLDpqGkVv~~ 456 (570)
++|. +. ...+ ||.+. |.. ..+.+ .+.|++.++| +++|||++|+|+..
T Consensus 104 ~~~~~~~-~~~~-----~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~ 166 (190)
T 2vup_A 104 KEFVCTK-FKAE-----FPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVER 166 (190)
T ss_dssp HHHHHHH-HCCC-----SCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEE
T ss_pred HHHHHHh-cCCC-----eEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEE
Confidence 4554 21 2233 33332 211 11122 3457999999 99999999999875
No 56
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.59 E-value=5.9e-15 Score=132.72 Aligned_cols=111 Identities=15% Similarity=0.160 Sum_probs=86.8
Q ss_pred CCCcccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHH
Q 008311 327 LQPLVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQK 404 (570)
Q Consensus 327 ~~pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~ 404 (570)
+...+.+.+|+.+++++++ |+|+|+|||+||++|+.++ |.++++++ +++|++|++ | .+.+.+
T Consensus 12 p~f~l~~~~g~~~~l~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~---------~v~~v~v~~-d-----~~~~~~ 75 (154)
T 3ia1_A 12 PDFLLLDPKGQPVTPATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET---------GVPFYVISR-E-----PRDTRE 75 (154)
T ss_dssp CCCCEECTTSCEECTTTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH---------CCCEEEEEC-C-----TTCCHH
T ss_pred CceEEECCCCCEechHHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc---------CCeEEEEeC-C-----CcccHH
Confidence 3345667899999999999 9999999999999999999 99999887 378999996 2 123445
Q ss_pred HHHHHHcCCCceeeccccccCh-HHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 405 KFETLQSSMPWYTVYHPTLIDR-AVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 405 ~F~~~~~~MPW~aV~fP~l~D~-~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
.++++..+.++ +||.+.|. .....+.+.|++.++|+++++|++|+++..
T Consensus 76 ~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 125 (154)
T 3ia1_A 76 VVLEYMKTYPR---FIPLLASDRDRPHEVAARFKVLGQPWTFVVDREGKVVAL 125 (154)
T ss_dssp HHHHHHTTCTT---EEECBCCSSCCHHHHHTTSSBCSSCEEEEECTTSEEEEE
T ss_pred HHHHHHHHcCC---CcccccccccchHHHHHHhCCCcccEEEEECCCCCEEEE
Confidence 56666555443 45555551 124678999999999999999999999875
No 57
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.59 E-value=4.8e-15 Score=138.74 Aligned_cols=116 Identities=13% Similarity=0.069 Sum_probs=78.5
Q ss_pred CcccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccC-CCC-CChhhHH
Q 008311 329 PLVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDH-FIH-WDDPTQK 404 (570)
Q Consensus 329 pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~-s~~-w~D~~~~ 404 (570)
..+.+.+|+.+++++++||+|+|+|||+|||+|+.++ |.++|+++++ ++++||+|++.+. +.+ .+.+..+
T Consensus 30 f~l~~~~G~~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~------~~v~vv~vs~d~~~~~e~~~~~~~~ 103 (183)
T 2obi_A 30 FSAKDIDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAE------CGLRILAFPCNQFGKQEPGSNEEIK 103 (183)
T ss_dssp CEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTEEEEEEECCCSTTCCCSCHHHHH
T ss_pred eEEEcCCCCEeeHHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhc------CCeEEEEEECCCCCCCCCCCHHHHH
Confidence 4456789999999999999999999999999999999 9999999973 3699999996210 000 1223334
Q ss_pred HHHHHHcCCCceeecccccc--ChH------HHHHHHHhC---C-----CCCCceEEEECCCCcEEcc
Q 008311 405 KFETLQSSMPWYTVYHPTLI--DRA------VIRYVKDVW---H-----FKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 405 ~F~~~~~~MPW~aV~fP~l~--D~~------~~~~L~~~y---~-----V~~IPtlVVLDpqGkVv~~ 456 (570)
+|. .+. .++||.+. |.. ..+.+.... + ++.+|+++|||++|+|+..
T Consensus 104 ~~~---~~~---~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~ 165 (183)
T 2obi_A 104 EFA---AGY---NVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKR 165 (183)
T ss_dssp HHH---HTT---TCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEE
T ss_pred HHH---HHc---CCCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEE
Confidence 443 222 22344332 211 112222221 3 4557999999999999875
No 58
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.59 E-value=4.3e-15 Score=129.25 Aligned_cols=106 Identities=16% Similarity=0.098 Sum_probs=79.9
Q ss_pred CcccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHH
Q 008311 329 PLVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKF 406 (570)
Q Consensus 329 pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F 406 (570)
..+.+.+|+.+++++++||+|+|+||++||++|+.++ |.+++++++ +++++.|++.+ +.+..+.|
T Consensus 8 ~~~~~~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--------~~~~~~v~~~~-----~~~~~~~~ 74 (136)
T 1zzo_A 8 FSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--------EVTFVGVAGLD-----QVPAMQEF 74 (136)
T ss_dssp CEEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEECSS-----CHHHHHHH
T ss_pred cccccCCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--------CeEEEEEeCCC-----CHHHHHHH
Confidence 3456778999999999999999999999999999999 999988772 58999999621 22233333
Q ss_pred HHHHcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEE
Q 008311 407 ETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVV 454 (570)
Q Consensus 407 ~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv 454 (570)
.+. ..++ +||.+.|. ...+.+.|++.++|+++++|++|+++
T Consensus 75 ~~~-~~~~----~~~~~~d~--~~~~~~~~~i~~~P~~~~id~~g~i~ 115 (136)
T 1zzo_A 75 VNK-YPVK----TFTQLADT--DGSVWANFGVTQQPAYAFVDPHGNVD 115 (136)
T ss_dssp HHH-TTCT----TSEEEECT--TCHHHHHTTCCSSSEEEEECTTCCEE
T ss_pred HHH-cCCC----ceEEEEcC--CcHHHHHcCCCCCceEEEECCCCCEE
Confidence 321 2330 23333443 24678899999999999999999997
No 59
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.59 E-value=3.7e-15 Score=136.71 Aligned_cols=117 Identities=10% Similarity=0.132 Sum_probs=81.8
Q ss_pred CCcccCCCCCeeeccccCCCEEEEEEecCCCH-HhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHH
Q 008311 328 QPLVDGSTKRRVNIEVLRRKNVLLLISDLDIS-QEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQK 404 (570)
Q Consensus 328 ~pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCp-PCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~ 404 (570)
...+.+.+|+.+++++++||+|+|+|||+||+ +|+.++ |.++|+++++ + +.+++||+|++ |.. ..+.+
T Consensus 15 ~f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~---~-~~~~~vv~is~-d~~----~d~~~ 85 (174)
T 1xzo_A 15 PFTFQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKA---E-NIDVRIISFSV-DPE----NDKPK 85 (174)
T ss_dssp CCEEECTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHH---T-TCCCEEEEEES-CTT----TCCHH
T ss_pred CcEEEcCCCCEEehhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhh---c-CCcEEEEEEEe-CCC----CCCHH
Confidence 34466889999999999999999999999999 999999 9999999974 2 33699999997 310 01223
Q ss_pred HHHHHHcCCCceeecc---ccccC--hHHHHHHHH------------hCCCCCCceEEEECCCCcEEcc
Q 008311 405 KFETLQSSMPWYTVYH---PTLID--RAVIRYVKD------------VWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 405 ~F~~~~~~MPW~aV~f---P~l~D--~~~~~~L~~------------~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+++..+.. ++| |.+.| .+..+.+.. .|++..+|+++|||++|+|+..
T Consensus 86 ~~~~~~~~~~---~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~ 151 (174)
T 1xzo_A 86 QLKKFAANYP---LSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKD 151 (174)
T ss_dssp HHHHHHTTSC---CCGGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEE
T ss_pred HHHHHHHHcC---CCCcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEE
Confidence 3344443322 223 33334 222222221 2567889999999999999875
No 60
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.37 E-value=9.7e-17 Score=145.73 Aligned_cols=110 Identities=17% Similarity=0.175 Sum_probs=83.5
Q ss_pred CcccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHH-HHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHH
Q 008311 329 PLVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQ-IYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKK 405 (570)
Q Consensus 329 pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~-iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~ 405 (570)
..+.+.+|+.+++++++||+|+|+|||+||++|+.++ |.+ ++++++. +.+++||.|++ | .+.+.
T Consensus 16 f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~-----~~~~~vv~v~~-d-------~~~~~ 82 (159)
T 2ls5_A 16 FTITLTDGKQVTLSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKD-----NADFALIGIDR-D-------EPLEK 82 (159)
Confidence 3456778999999999999999999999999999999 888 9988851 34799999986 2 22222
Q ss_pred HHHHHcCCCceeeccccccChHHHHHHHHhCC--CCCCceEEEECCCCcEEcc
Q 008311 406 FETLQSSMPWYTVYHPTLIDRAVIRYVKDVWH--FKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 406 F~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~--V~~IPtlVVLDpqGkVv~~ 456 (570)
.+++..+.. ++||.+.|. ...+.+.|+ +.++|+++++|++|+++..
T Consensus 83 ~~~~~~~~~---~~~~~~~d~--~~~~~~~~~~~~~~~P~~~lid~~G~i~~~ 130 (159)
T 2ls5_A 83 VLAFAKSTG---VTYPLGLDP--GADIFAKYALRDAGITRNVLIDREGKIVKL 130 (159)
Confidence 333333322 355666664 356888999 5679999999999999875
No 61
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.59 E-value=5.5e-15 Score=143.61 Aligned_cols=56 Identities=11% Similarity=-0.071 Sum_probs=49.9
Q ss_pred CcccCCC-CCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEec
Q 008311 329 PLVDGST-KRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPI 391 (570)
Q Consensus 329 pl~~g~~-G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsI 391 (570)
..+.+.+ |+.+++++++||+|+|+|||+||||| .++ |.++|+++++ ++++||+||.
T Consensus 20 F~l~d~~~G~~v~Ls~~kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~------~g~~vlgvs~ 78 (207)
T 2r37_A 20 YGALTIDGEEYIPFKQYAGKYVLFVNVASYGGLT-GQYIELNALQEELAP------FGLVILGFPC 78 (207)
T ss_dssp CEEEBTTSSCEEEGGGGTTSEEEEEEECSSSTTT-THHHHHHHHHHHHGG------GTEEEEEEEC
T ss_pred eEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhcc------CCEEEEEEEC
Confidence 3456778 99999999999999999999999999 678 9999999973 3699999996
No 62
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.59 E-value=1.8e-16 Score=147.87 Aligned_cols=110 Identities=17% Similarity=0.173 Sum_probs=85.8
Q ss_pred CCCcccCCCCCeeecccc--CCCEEEEEEe-cCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChh
Q 008311 327 LQPLVDGSTKRRVNIEVL--RRKNVLLLIS-DLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDP 401 (570)
Q Consensus 327 ~~pl~~g~~G~~Vsls~L--kGKvVlL~Fw-AsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~ 401 (570)
|...+.+.+|+.++++++ +||+|+|+|| |+|||+|+.++ |.+.|+++++ .+++||+||. | +.+
T Consensus 12 PdF~l~~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~------~~v~vv~is~-d-----~~~ 79 (164)
T 4gqc_A 12 PDFTLPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEK------ANAEVLAISV-D-----SPW 79 (164)
T ss_dssp CCCEEEBTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGG------SSSEEEEEES-S-----CHH
T ss_pred cCcEeECCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhc------cCceEEEecC-C-----CHH
Confidence 444566889999999998 8999999887 99999999999 9999999963 4799999996 3 344
Q ss_pred hHHHHHHHHcCCCceeeccccccChHHHHHHHHhCCCC----------CCceEEEECCCCcEEcc
Q 008311 402 TQKKFETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFK----------NKPILVVLDPQGRVVSP 456 (570)
Q Consensus 402 ~~~~F~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~----------~IPtlVVLDpqGkVv~~ 456 (570)
..++|.+. .. ++||.+.|.. ..+.+.||+. ..|+++|||++|+|+..
T Consensus 80 ~~~~~~~~-~~-----~~fp~l~D~~--~~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~ 136 (164)
T 4gqc_A 80 CLKKFKDE-NR-----LAFNLLSDYN--REVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYK 136 (164)
T ss_dssp HHHHHHHH-TT-----CCSEEEECTT--SHHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEE
T ss_pred HHHHHHHh-cC-----cccceeecCc--hHHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEE
Confidence 45666542 23 3566666753 4688899984 37899999999999865
No 63
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.59 E-value=3.3e-15 Score=148.18 Aligned_cols=116 Identities=15% Similarity=0.086 Sum_probs=87.9
Q ss_pred CCCccc-----CCCCCeeeccccCCCEEEEEEec-CCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCC
Q 008311 327 LQPLVD-----GSTKRRVNIEVLRRKNVLLLISD-LDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHW 398 (570)
Q Consensus 327 ~~pl~~-----g~~G~~Vsls~LkGKvVlL~FwA-sWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w 398 (570)
+.|.|. +.+|+.+++++++||+|+|+||+ +|||+|+.++ |.++|+++++ .+++||+||+ |
T Consensus 53 ~aPdF~l~~~~d~~G~~vsLsd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~------~gv~vv~Is~-D----- 120 (240)
T 3qpm_A 53 PAPQWEGTAVINGEFKELKLSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRA------INTEVVACSV-D----- 120 (240)
T ss_dssp BCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHT------TTEEEEEEES-S-----
T ss_pred CCCCcEeeeeeCCCCcEEEHHHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHH------CCCEEEEEEC-C-----
Confidence 455554 45677999999999999999999 9999999999 9999999973 4799999996 3
Q ss_pred ChhhHHHHHHHH-cCCCceeeccccccChHHHHHHHHhCCCC------CCceEEEECCCCcEEcc
Q 008311 399 DDPTQKKFETLQ-SSMPWYTVYHPTLIDRAVIRYVKDVWHFK------NKPILVVLDPQGRVVSP 456 (570)
Q Consensus 399 ~D~~~~~F~~~~-~~MPW~aV~fP~l~D~~~~~~L~~~y~V~------~IPtlVVLDpqGkVv~~ 456 (570)
+.+..+.|.+.. ....-..++||.+.|.. ..+.+.|++. .+|+++|||++|+|+..
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~--~~v~~~ygv~~~~~g~~~p~~flID~~G~I~~~ 183 (240)
T 3qpm_A 121 SQFTHLAWIITPRKQGGLGPMKIPLLSDLT--HQISKDYGVYLEDQGHTLRGLFIIDEKGVLRQI 183 (240)
T ss_dssp CHHHHHHHHHSCGGGTCCCSCSSCEEECTT--SHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred CHHHHHHHHHHHHhhcCCCCCceeEEeCch--HHHHHHhCCccccCCCccceEEEEcCCCeEEEE
Confidence 234445564421 11111134566666753 5788999997 68999999999999876
No 64
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.59 E-value=5.4e-15 Score=138.23 Aligned_cols=111 Identities=15% Similarity=0.068 Sum_probs=80.9
Q ss_pred cCCCCCcccCCCC--CeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCC
Q 008311 324 KDDLQPLVDGSTK--RRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWD 399 (570)
Q Consensus 324 k~~~~pl~~g~~G--~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~ 399 (570)
...+...+.+.+| +.+++++++||+|+|+|||+||++|+.++ |.++|++ +++||+|++.| +
T Consensus 34 ~~~P~f~l~~~~g~~~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----------~v~vv~vs~~d-----~ 98 (176)
T 3kh7_A 34 KPFPAFDLPSVQDPARRLTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ----------GVVIYGINYKD-----D 98 (176)
T ss_dssp SBCCCCEEEBSSCTTSEEEGGGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----------TCEEEEEEESC-----C
T ss_pred CcCCCcEecccCCCCceecHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC----------CCEEEEEeCCC-----C
Confidence 3334445667777 89999999999999999999999999998 8887753 48999999722 2
Q ss_pred hhhHHHHHHHHcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 400 DPTQKKFETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 400 D~~~~~F~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
.+..+.|.+. ...+|..+ +.|. ...+.+.|++.++|+++|||++|+|+..
T Consensus 99 ~~~~~~~~~~-~~~~~~~~----~~d~--~~~~~~~~~v~~~P~~~lid~~G~i~~~ 148 (176)
T 3kh7_A 99 NAAAIKWLNE-LHNPYLLS----ISDA--DGTLGLDLGVYGAPETYLIDKQGIIRHK 148 (176)
T ss_dssp HHHHHHHHHH-TTCCCSEE----EEET--TCHHHHHHTCCSSCEEEEECTTCBEEEE
T ss_pred HHHHHHHHHH-cCCCCceE----EECC--cchHHHHcCCCCCCeEEEECCCCeEEEE
Confidence 3333344321 23444322 2243 3468889999999999999999999864
No 65
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.59 E-value=1.3e-14 Score=135.62 Aligned_cols=120 Identities=18% Similarity=0.238 Sum_probs=78.6
Q ss_pred CcccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCC--CCCChhhHH
Q 008311 329 PLVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHF--IHWDDPTQK 404 (570)
Q Consensus 329 pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s--~~w~D~~~~ 404 (570)
..+.+.+|+.+++++++||+|+|+|||+|||||+.++ |.++|+++++ ++++||+|++.+-. ..-+.+..+
T Consensus 21 f~l~d~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~------~~~~vi~is~d~~~~~~~d~~~~~~ 94 (180)
T 3kij_A 21 FEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGP------SHFSVLAFPCNQFGESEPRPSKEVE 94 (180)
T ss_dssp CEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTT------TSEEEEEEECCCSTTCCCSCHHHHH
T ss_pred eEEecCCCCEecHHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhcc------CCeEEEEEECCccccCCCCCHHHHH
Confidence 3356789999999999999999999999999999999 9999999963 47999999963200 000233344
Q ss_pred HHHHHHcCCCceeeccccccCh---HHHHHHHHhCCCCCCce----EEEECCCCcEEcc
Q 008311 405 KFETLQSSMPWYTVYHPTLIDR---AVIRYVKDVWHFKNKPI----LVVLDPQGRVVSP 456 (570)
Q Consensus 405 ~F~~~~~~MPW~aV~fP~l~D~---~~~~~L~~~y~V~~IPt----lVVLDpqGkVv~~ 456 (570)
+|.+.....+|..+......+. .....+... +.++|+ ++|||++|+|+..
T Consensus 95 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~--~~~~p~~~~~~~lid~~G~i~~~ 151 (180)
T 3kij_A 95 SFARKNYGVTFPIFHKIKILGSEGEPAFRFLVDS--SKKEPRWNFWKYLVNPEGQVVKF 151 (180)
T ss_dssp HHHHHHHCCCSCBBCCCCCSSTTCCHHHHHHHHH--HTCCCSSTTCEEEECTTSCEEEE
T ss_pred HHHHHhcCCCCceeeeeeccCccccHHHHHHHhc--CCCCccccceEEEECCCCCEEEE
Confidence 5543212233221110001111 122233332 347898 9999999999875
No 66
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.58 E-value=4.5e-16 Score=145.95 Aligned_cols=117 Identities=14% Similarity=0.122 Sum_probs=78.3
Q ss_pred CCcccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccC-CCCC-ChhhH
Q 008311 328 QPLVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDH-FIHW-DDPTQ 403 (570)
Q Consensus 328 ~pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~-s~~w-~D~~~ 403 (570)
...+.+.+|+.+++++++||+|+|+|||+|||||+.++ |.++|+++++ ++++||+|++.+. ..+. +.+..
T Consensus 31 ~f~l~~~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~------~~v~vv~vs~d~~~~~e~~~~~~~ 104 (181)
T 2p31_A 31 DFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGP------HHFNVLAFPCNQFGQQEPDSNKEI 104 (181)
T ss_dssp GCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTEEEEEEECCCSTTCCCSCHHHH
T ss_pred ceEeecCCCCEecHHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhc------CCEEEEEEECcCCCCCCCCCHHHH
Confidence 34456789999999999999999999999999999999 9999999973 3699999997210 0000 12233
Q ss_pred HHHHHHHcCCCceeecccccc--ChHHH--HHHHHhCCCCCCc-------eEEEECCCCcEEcc
Q 008311 404 KKFETLQSSMPWYTVYHPTLI--DRAVI--RYVKDVWHFKNKP-------ILVVLDPQGRVVSP 456 (570)
Q Consensus 404 ~~F~~~~~~MPW~aV~fP~l~--D~~~~--~~L~~~y~V~~IP-------tlVVLDpqGkVv~~ 456 (570)
+.|.+-...+ +||.+. |..+. ..+. .|.+.++| +++|||++|+|+..
T Consensus 105 ~~~~~~~~~~-----~~p~~~~~d~~g~~~~~~~-~~~~~~~P~~~~~~~~~~lid~~G~i~~~ 162 (181)
T 2p31_A 105 ESFARRTYSV-----SFPMFSKIAVTGTGAHPAF-KYLAQTSGKEPTWNFWKYLVAPDGKVVGA 162 (181)
T ss_dssp HHHHHHHHCC-----CSCBBCCCCCSSTTSCHHH-HHHHHHHSCCCCSTTCEEEECTTSCEEEE
T ss_pred HHHHHhhcCC-----CceeEeecccCCccchhhh-hhhhhcCCCccccceeEEEEcCCCCEEEE
Confidence 4443321223 344332 21110 0011 23456678 99999999999875
No 67
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.58 E-value=1.7e-15 Score=142.04 Aligned_cols=116 Identities=11% Similarity=0.104 Sum_probs=84.1
Q ss_pred Cccc-CCCCCeeeccccCCC-EEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHH
Q 008311 329 PLVD-GSTKRRVNIEVLRRK-NVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQK 404 (570)
Q Consensus 329 pl~~-g~~G~~Vsls~LkGK-vVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~ 404 (570)
..+. +.+|+.+++++++|| +|+|+|||+||++|+.++ |.++++++++ .+++||.|++ |........+.+
T Consensus 27 f~l~~~~~G~~~~l~~~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~------~~v~vv~v~~-d~~~~~~~d~~~ 99 (196)
T 2ywi_A 27 FALTNVIDGNVVRLEDVKSDAATVIMFICNHCPFVKHVQHELVRLANDYMP------KGVSFVAINS-NDAEQYPEDSPE 99 (196)
T ss_dssp CEEEETTTCCEEEHHHHCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGG------GTCEEEEEEC-SCTTTCGGGSHH
T ss_pred eeeeecCCCCEEeHHHhCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHh------CCcEEEEEEC-CccccccccCHH
Confidence 3455 789999999999998 599999999999999999 9999999963 3699999996 210000001223
Q ss_pred HHHHHHcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 405 KFETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 405 ~F~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
...++..+. .++||.+.|. ...+.+.|++.++|+++|+|++|+++..
T Consensus 100 ~~~~~~~~~---~~~~~~~~d~--~~~~~~~~~v~~~P~~~lid~~G~i~~~ 146 (196)
T 2ywi_A 100 NMKKVAEEL---GYPFPYLYDE--TQEVAKAYDAACTPDFYIFDRDLKCVYR 146 (196)
T ss_dssp HHHHHHHHH---TCCSCEEECS--SCHHHHHHTCCEESEEEEEETTCBEEEE
T ss_pred HHHHHHHHc---CCCceEEECC--chHHHHHhCCCCCCeEEEEcCCCeEEEc
Confidence 333332221 2344545554 2457889999999999999999999876
No 68
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.58 E-value=3.3e-15 Score=141.45 Aligned_cols=111 Identities=12% Similarity=0.056 Sum_probs=83.9
Q ss_pred ccCC-CC--CeeeccccCCCEEEEEEec-CCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHH
Q 008311 331 VDGS-TK--RRVNIEVLRRKNVLLLISD-LDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQK 404 (570)
Q Consensus 331 ~~g~-~G--~~Vsls~LkGKvVlL~FwA-sWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~ 404 (570)
+.+. +| +.+++++++||+|+|+||+ +|||+|+.++ |.++|+++++ .+++||+||+ | +.+..+
T Consensus 12 l~~~~~G~~~~v~l~~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~------~~v~vv~Is~-d-----~~~~~~ 79 (186)
T 1n8j_A 12 NQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQK------LGVDVYSVST-D-----THFTHK 79 (186)
T ss_dssp EEEEETTEEEEEEHHHHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHH------TTEEEEEEES-S-----CHHHHH
T ss_pred eecccCCcceEEEHHHHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHH------CCCEEEEEEC-C-----CHHHHH
Confidence 4455 58 8999999999999999995 9999999999 9999999973 4799999996 3 233445
Q ss_pred HHHHHHcCCCceeeccccccChHHHHHHHHhCCCC------CCceEEEECCCCcEEccc
Q 008311 405 KFETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFK------NKPILVVLDPQGRVVSPN 457 (570)
Q Consensus 405 ~F~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~------~IPtlVVLDpqGkVv~~n 457 (570)
.|.+... .+-.++||.+.|. ...+.+.|++. ..|+++|||++|+|+...
T Consensus 80 ~~~~~~~--~~~~~~fp~l~D~--~~~~~~~ygv~~~~~g~~~p~~~lID~~G~i~~~~ 134 (186)
T 1n8j_A 80 AWHSSSE--TIAKIKYAMIGDP--TGALTRNFDNMREDEGLADRATFVVDPQGIIQAIE 134 (186)
T ss_dssp HHHHHCT--TGGGCCSEEEECT--TSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred HHHHHcC--cccCCceeEEECC--chHHHHHhCCccCCCCceeeEEEEECCCCeEEEEE
Confidence 5544221 1113445555564 34578889987 379999999999998763
No 69
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.58 E-value=3e-15 Score=142.21 Aligned_cols=112 Identities=15% Similarity=0.096 Sum_probs=84.1
Q ss_pred ccCC-CC--CeeeccccCCCEEEEEEe-cCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHH
Q 008311 331 VDGS-TK--RRVNIEVLRRKNVLLLIS-DLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQK 404 (570)
Q Consensus 331 ~~g~-~G--~~Vsls~LkGKvVlL~Fw-AsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~ 404 (570)
+.+. +| +.+++++++||+|+|+|| |+||++|+.++ |.++|+++++ .+++||+|++ | ..++..
T Consensus 16 l~~~~~g~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~------~~v~vv~Is~-d-----~~~~~~ 83 (197)
T 1qmv_A 16 ATAVVDGAFKEVKLSDYKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRK------LGCEVLGVSV-D-----SQFTHL 83 (197)
T ss_dssp EEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHT------TTEEEEEEES-S-----CHHHHH
T ss_pred eEeecCCCccEEEHHHHCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH------CCCEEEEEEC-C-----CHHHHH
Confidence 3344 67 999999999999999999 99999999999 9999999963 4799999996 3 233344
Q ss_pred HHHHHHc-CCCceeeccccccChHHHHHHHHhCCCC------CCceEEEECCCCcEEcc
Q 008311 405 KFETLQS-SMPWYTVYHPTLIDRAVIRYVKDVWHFK------NKPILVVLDPQGRVVSP 456 (570)
Q Consensus 405 ~F~~~~~-~MPW~aV~fP~l~D~~~~~~L~~~y~V~------~IPtlVVLDpqGkVv~~ 456 (570)
.|.+... ...-..++||.+.|. ...+.+.|++. ++|+++|||++|+|+..
T Consensus 84 ~~~~~~~~~~~~~~~~~p~l~D~--~~~~~~~~gv~~~~~~~~~P~~~lid~~G~i~~~ 140 (197)
T 1qmv_A 84 AWINTPRKEGGLGPLNIPLLADV--TRRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQI 140 (197)
T ss_dssp HHHTSCGGGTCCCSCSSCEEECT--TCHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred HHHHHHHhhCCCCCCceEEEECC--cHHHHHHcCCccCCCCceeeEEEEECCCCcEEEE
Confidence 4433211 111013455655664 34688899998 79999999999999876
No 70
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.58 E-value=1.6e-15 Score=142.62 Aligned_cols=117 Identities=12% Similarity=0.049 Sum_probs=78.8
Q ss_pred CCcccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccC--CCCCChhhH
Q 008311 328 QPLVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDH--FIHWDDPTQ 403 (570)
Q Consensus 328 ~pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~--s~~w~D~~~ 403 (570)
...+.+.+|+.+++++++||+|+|+|||+|||+|+.++ |.++|+++++ ++++||+|++.+. ...++.+..
T Consensus 31 ~f~l~~~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~------~~v~vv~is~d~~~~~~~~~~~~~ 104 (185)
T 2gs3_A 31 EFSAKDIDGHMVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAE------CGLRILAFPCNQFGKQEPGSNEEI 104 (185)
T ss_dssp GCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTEEEEEEECCTTTTCCCSCHHHH
T ss_pred CceeEcCCCCEeeHHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhc------CCeEEEEEECcccCCCCCCCHHHH
Confidence 34456789999999999999999999999999999999 9999999973 3699999996210 001122333
Q ss_pred HHHHHHHcCCCceeecccccc--ChH------HHHHHHHhC---C-----CCCCceEEEECCCCcEEcc
Q 008311 404 KKFETLQSSMPWYTVYHPTLI--DRA------VIRYVKDVW---H-----FKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 404 ~~F~~~~~~MPW~aV~fP~l~--D~~------~~~~L~~~y---~-----V~~IPtlVVLDpqGkVv~~ 456 (570)
++|.+ ....+ ||.+. |.. ..+.+.+.+ + ++.+|+++|||++|+|+..
T Consensus 105 ~~~~~-~~~~~-----~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~ 167 (185)
T 2gs3_A 105 KEFAA-GYNVK-----FDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKR 167 (185)
T ss_dssp HHHHH-HTTCC-----SEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEE
T ss_pred HHHHH-HcCCC-----CeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEe
Confidence 44432 12333 33332 111 112222221 4 3447999999999999875
No 71
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.58 E-value=3.2e-15 Score=142.77 Aligned_cols=108 Identities=13% Similarity=0.123 Sum_probs=84.0
Q ss_pred CC--CeeeccccCCCEEEEEEe-cCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHH
Q 008311 335 TK--RRVNIEVLRRKNVLLLIS-DLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETL 409 (570)
Q Consensus 335 ~G--~~Vsls~LkGKvVlL~Fw-AsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~ 409 (570)
+| +.+++++++||+|+|+|| |+||++|+.++ |.++|+++++ .+++||+|++ | +.+..+.|.+.
T Consensus 23 ~g~~~~v~l~~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~------~~v~vi~Is~-D-----~~~~~~~~~~~ 90 (202)
T 1uul_A 23 NGTFKKVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSD------IGCEVLACSM-D-----SEYSHLAWTSI 90 (202)
T ss_dssp TSCEEEEEGGGGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHT------TTEEEEEEES-S-----CHHHHHHHHHS
T ss_pred CCCccEEEHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHH------CCCEEEEEeC-C-----CHHHHHHHHHH
Confidence 57 899999999999999999 99999999999 9999999963 4799999996 3 23344455432
Q ss_pred H-cCCCceeeccccccChHHHHHHHHhCCCC------CCceEEEECCCCcEEcc
Q 008311 410 Q-SSMPWYTVYHPTLIDRAVIRYVKDVWHFK------NKPILVVLDPQGRVVSP 456 (570)
Q Consensus 410 ~-~~MPW~aV~fP~l~D~~~~~~L~~~y~V~------~IPtlVVLDpqGkVv~~ 456 (570)
. ....+-.++||.+.|. ...+.+.|++. ++|+++|||++|+|+..
T Consensus 91 ~~~~~~~~~~~~p~l~D~--~~~~~~~ygv~~~~~g~~~P~~~lid~~G~i~~~ 142 (202)
T 1uul_A 91 ERKRGGLGQMNIPILADK--TKCIMKSYGVLKEEDGVAYRGLFIIDPKQNLRQI 142 (202)
T ss_dssp CGGGTCCCSCSSCEEECT--TCHHHHHHTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred HHhhCCCCCCceeEEECC--chHHHHHcCCccCCCCceeeEEEEECCCCEEEEE
Confidence 1 1112224556666664 35688899999 99999999999999876
No 72
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.57 E-value=3.4e-15 Score=145.47 Aligned_cols=110 Identities=13% Similarity=0.089 Sum_probs=85.9
Q ss_pred CCCCCeeeccccCCCEEEEEEe-cCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHH-
Q 008311 333 GSTKRRVNIEVLRRKNVLLLIS-DLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFET- 408 (570)
Q Consensus 333 g~~G~~Vsls~LkGKvVlL~Fw-AsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~- 408 (570)
+.+|+.+++++++||+|+|+|| |+|||+|+.++ |.++|+++++ .+++||+|++ | +....+.|.+
T Consensus 43 ~~~g~~v~l~d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~------~~v~vv~Is~-D-----~~~~~~~~~~~ 110 (220)
T 1zye_A 43 SGEFKEISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHD------VNCEVVAVSV-D-----SHFSHLAWINT 110 (220)
T ss_dssp SSSEEEEEGGGGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHH------TTEEEEEEES-S-----CHHHHHHHHTS
T ss_pred CCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH------CCCEEEEEEC-C-----CHHHHHHHHHH
Confidence 5678999999999999999999 99999999999 9999999973 3799999996 2 2333444543
Q ss_pred HHcCCCceeeccccccChHHHHHHHHhCCCC------CCceEEEECCCCcEEcc
Q 008311 409 LQSSMPWYTVYHPTLIDRAVIRYVKDVWHFK------NKPILVVLDPQGRVVSP 456 (570)
Q Consensus 409 ~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~------~IPtlVVLDpqGkVv~~ 456 (570)
+.....+..++||.+.|. ...+.+.|++. ++|+++|||++|+|+..
T Consensus 111 ~~~~~g~~~~~fp~l~D~--~~~i~~~ygv~~~~~g~~~P~~~liD~~G~I~~~ 162 (220)
T 1zye_A 111 PRKNGGLGHMNIALLSDL--TKQISRDYGVLLEGPGLALRGLFIIDPNGVIKHL 162 (220)
T ss_dssp CGGGTCCCSCSSEEEECT--TSHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred HHHhCCCcCCceEEEECC--cHHHHHHhCCeecCCCcccceEEEECCCCEEEEE
Confidence 212222224556666664 35688999999 99999999999999875
No 73
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.57 E-value=3.3e-15 Score=141.68 Aligned_cols=105 Identities=11% Similarity=0.098 Sum_probs=81.8
Q ss_pred CeeeccccCCCEEEEEEe-cCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCC
Q 008311 337 RRVNIEVLRRKNVLLLIS-DLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSM 413 (570)
Q Consensus 337 ~~Vsls~LkGKvVlL~Fw-AsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~M 413 (570)
+.+++++++||+|+|+|| |+||++|+.++ |.++|+++++ .+++||+|++ | ..+..+.|.+...
T Consensus 36 ~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~------~~v~vv~Vs~-d-----~~~~~~~~~~~~~-- 101 (195)
T 2bmx_A 36 TTITSDEHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFED------RDAQILGVSI-D-----SEFAHFQWRAQHN-- 101 (195)
T ss_dssp EEEETTSSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHT------TTEEEEEEES-S-----CHHHHHHHHHHCT--
T ss_pred cEeeHHHhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHH------CCCEEEEEEC-C-----CHHHHHHHHHHhc--
Confidence 899999999999999999 99999999999 9999999963 4799999996 3 2334455543221
Q ss_pred CceeeccccccChHHHHHHHHhCCCC-----CCceEEEECCCCcEEccc
Q 008311 414 PWYTVYHPTLIDRAVIRYVKDVWHFK-----NKPILVVLDPQGRVVSPN 457 (570)
Q Consensus 414 PW~aV~fP~l~D~~~~~~L~~~y~V~-----~IPtlVVLDpqGkVv~~n 457 (570)
.+..++||.+.|. ...+.+.|++. ++|+++|||++|+|+...
T Consensus 102 ~~~~~~~~~~~d~--~~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~ 148 (195)
T 2bmx_A 102 DLKTLPFPMLSDI--KRELSQAAGVLNADGVADRVTFIVDPNNEIQFVS 148 (195)
T ss_dssp TGGGCCSCEEECT--TSHHHHHHTCBCTTSSBCEEEEEECTTSBEEEEE
T ss_pred cccCCceeEEeCC--chHHHHHhCCcccCCCccceEEEEcCCCeEEEEE
Confidence 1113445555564 35678899999 999999999999998763
No 74
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.57 E-value=4.5e-15 Score=139.42 Aligned_cols=109 Identities=13% Similarity=0.086 Sum_probs=84.4
Q ss_pred cccCCCCC----eeeccccCCCEEEEEEe-cCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhh
Q 008311 330 LVDGSTKR----RVNIEVLRRKNVLLLIS-DLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPT 402 (570)
Q Consensus 330 l~~g~~G~----~Vsls~LkGKvVlL~Fw-AsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~ 402 (570)
.+.+.+|+ .+++++++||+|+|+|| |+||++|+.++ |.++|+++++ .+++||+|++ | ..+.
T Consensus 11 ~l~~~~g~~~~~~~~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~------~~v~vv~vs~-d-----~~~~ 78 (187)
T 1we0_A 11 RAQAFQSGKDFFEVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKK------LGVEVYSVST-D-----THFV 78 (187)
T ss_dssp EEEEECSSSCCEEEETTTTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHH------TTEEEEEEES-S-----CHHH
T ss_pred EEeccCCCccceEecHHHHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHH------cCCEEEEEEC-C-----CHHH
Confidence 34556777 99999999999999999 99999999999 9999999973 3799999996 3 2334
Q ss_pred HHHHHHHHc---CCCceeeccccccChHHHHHHHHhCCCC------CCceEEEECCCCcEEccc
Q 008311 403 QKKFETLQS---SMPWYTVYHPTLIDRAVIRYVKDVWHFK------NKPILVVLDPQGRVVSPN 457 (570)
Q Consensus 403 ~~~F~~~~~---~MPW~aV~fP~l~D~~~~~~L~~~y~V~------~IPtlVVLDpqGkVv~~n 457 (570)
.+.|.+... .++ ||.+.|. ...+.+.|++. ++|+++|||++|+|+...
T Consensus 79 ~~~~~~~~~~~~~~~-----~~~~~d~--~~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~~ 135 (187)
T 1we0_A 79 HKAWHENSPAVGSIE-----YIMIGDP--SQTISRQFDVLNEETGLADRGTFIIDPDGVIQAIE 135 (187)
T ss_dssp HHHHHHSCHHHHTCC-----SEEEECT--TCHHHHHTTCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred HHHHHHHhccccCCC-----ceEEECC--chHHHHHhCCCcCCCCceeeEEEEECCCCeEEEEE
Confidence 445543221 344 4444453 24678899998 999999999999998763
No 75
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.56 E-value=4e-15 Score=137.44 Aligned_cols=110 Identities=16% Similarity=0.092 Sum_probs=83.3
Q ss_pred CCCcccCCCCCeeeccccCCCEEEEEEe-cCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhH
Q 008311 327 LQPLVDGSTKRRVNIEVLRRKNVLLLIS-DLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQ 403 (570)
Q Consensus 327 ~~pl~~g~~G~~Vsls~LkGKvVlL~Fw-AsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~ 403 (570)
+...+.+.+|+.+++++++||+|+|+|| ++||++|+.++ |.++|++ + +++||+||. | +.+..
T Consensus 27 P~f~l~~~~G~~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-~--------~~~vv~is~-d-----~~~~~ 91 (166)
T 3p7x_A 27 PDFTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK-E--------EGIVLTISA-D-----LPFAQ 91 (166)
T ss_dssp CCCEEECTTSCEEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT-T--------TSEEEEEES-S-----CHHHH
T ss_pred CCeEEEcCCCCEEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc-C--------CCEEEEEEC-C-----CHHHH
Confidence 3344668899999999999999999999 78999999999 8888865 2 699999995 3 34455
Q ss_pred HHHHHHHcCCCceeeccccccChHHHHHHHHhCCCCC------CceEEEECCCCcEEccc
Q 008311 404 KKFETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKN------KPILVVLDPQGRVVSPN 457 (570)
Q Consensus 404 ~~F~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~------IPtlVVLDpqGkVv~~n 457 (570)
++|.+. ..++ +||.+.|. ....+.+.|++.. .|+++|||++|+|+...
T Consensus 92 ~~~~~~-~~~~----~~~~l~D~-~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~ 145 (166)
T 3p7x_A 92 KRWCAS-AGLD----NVITLSDH-RDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKE 145 (166)
T ss_dssp HHHHHH-HTCS----SCEEEECT-TTCHHHHHHTCEETTTTEECCEEEEECTTCBEEEEE
T ss_pred HHHHHH-cCCC----ceEEccCC-chhHHHHHhCCccccCCceeeEEEEECCCCeEEEEE
Confidence 666542 2331 34444454 0236788899985 89999999999998763
No 76
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.56 E-value=3.3e-15 Score=141.10 Aligned_cols=113 Identities=16% Similarity=0.122 Sum_probs=85.7
Q ss_pred ccCC--CC--Ceeecccc-CCCEEEEEEe-cCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhh
Q 008311 331 VDGS--TK--RRVNIEVL-RRKNVLLLIS-DLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPT 402 (570)
Q Consensus 331 ~~g~--~G--~~Vsls~L-kGKvVlL~Fw-AsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~ 402 (570)
+.+. +| +.++++++ +||+|+|+|| |+||++|+.++ |.++|+++++ .+++||+|++ | +.+.
T Consensus 11 l~~~~~~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~------~~v~vv~Is~-d-----~~~~ 78 (192)
T 2h01_A 11 AEAVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKE------RNVELLGCSV-D-----SKFT 78 (192)
T ss_dssp EEEECTTSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHH------TTEEEEEEES-S-----CHHH
T ss_pred eEeeecCCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH------CCCEEEEEEe-C-----CHHH
Confidence 4455 78 89999999 9999999999 99999999999 9999999963 4799999996 3 2333
Q ss_pred HHHHHHHH-cCCCceeeccccccChHHHHHHHHhCCCC-----CCceEEEECCCCcEEccc
Q 008311 403 QKKFETLQ-SSMPWYTVYHPTLIDRAVIRYVKDVWHFK-----NKPILVVLDPQGRVVSPN 457 (570)
Q Consensus 403 ~~~F~~~~-~~MPW~aV~fP~l~D~~~~~~L~~~y~V~-----~IPtlVVLDpqGkVv~~n 457 (570)
.+.|.+.. ....+..++||.+.|. ...+.+.|++. .+|+++|||++|+|+...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~l~D~--~~~~~~~~gv~~~~g~~~P~~~liD~~G~i~~~~ 137 (192)
T 2h01_A 79 HLAWKKTPLSQGGIGNIKHTLISDI--SKSIARSYDVLFNESVALRAFVLIDKQGVVQHLL 137 (192)
T ss_dssp HHHHHTSCGGGTCCCSCSSEEEECT--TSHHHHHTTCEETTTEECCEEEEECTTSBEEEEE
T ss_pred HHHHHHhHHhhCCccCCCcCeEECC--cHHHHHHhCCcCcCCceeeEEEEEcCCCEEEEEE
Confidence 44443321 1112223455656664 35688999999 899999999999998763
No 77
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.56 E-value=2e-14 Score=138.49 Aligned_cols=170 Identities=14% Similarity=0.115 Sum_probs=113.7
Q ss_pred cCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeeccc
Q 008311 344 LRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHP 421 (570)
Q Consensus 344 LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP 421 (570)
.+||+|+|+|||+||+||+.+. |.++++++++ .+.++.++.|.. +..
T Consensus 30 ~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~----~~~~~~~~~vd~--------~~~------------------- 78 (241)
T 3idv_A 30 ADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKD----KDPPIPVAKIDA--------TSA------------------- 78 (241)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHT----SSSCCCEEEEET--------TTC-------------------
T ss_pred hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhh----cCCceEEEEEec--------cCC-------------------
Confidence 4789999999999999999999 9999999963 123466776653 111
Q ss_pred cccChHHHHHHHHhCCCCCCceEEEECCCCcEEccccchhHhhhcCCCCCCCchhHHHHhhh---cCcc--ccccccCCC
Q 008311 422 TLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSPNALHMMWIWGSNAFPFTSLREEALWKE---ETWR--LELLVDGID 496 (570)
Q Consensus 422 ~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~na~~~I~~~G~~aFPFt~~~~e~L~~e---~~w~--~~ll~d~~d 496 (570)
..+.++|+|+++|++++++ +|+++...+. .+.....+...+ ..|. ...+..-.+
T Consensus 79 --------~~l~~~~~v~~~Pt~~~~~-~g~~~~~~g~------------~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~ 137 (241)
T 3idv_A 79 --------SVLASRFDVSGYPTIKILK-KGQAVDYEGS------------RTQEEIVAKVREVSQPDWTPPPEVTLVLTK 137 (241)
T ss_dssp --------HHHHHHTTCCSSSEEEEEE-TTEEEECCSC------------SCHHHHHHHHHHHHSTTCCCCCCSSEECCT
T ss_pred --------HHHHHhcCCCcCCEEEEEc-CCCcccccCc------------ccHHHHHHHHhhccCcccccccccceeccH
Confidence 1367789999999999996 6776643221 122222222211 0111 001111011
Q ss_pred ccccccccCCeEEEEEecCC-CchHHHHHHHHHHHHhhC---CCCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 497 PLVLDWIKEGKYIFLYGGDD-VEWVRKFTTAARSVANTA---RIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 497 ~~i~~~~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~---~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
......+.+++.+.++|.+. |++|+.|.+.+.+++++. +.++.++.|..+... .+.+.+++..+||+++
T Consensus 138 ~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~-~l~~~~~v~~~Pt~~~ 210 (241)
T 3idv_A 138 ENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAET-DLAKRFDVSGYPTLKI 210 (241)
T ss_dssp TTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCH-HHHHHTTCCSSSEEEE
T ss_pred HHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCH-HHHHHcCCcccCEEEE
Confidence 12222346788999999998 999999999999998652 445888888877654 4667778889999876
No 78
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.56 E-value=9.2e-15 Score=133.53 Aligned_cols=118 Identities=13% Similarity=0.235 Sum_probs=83.3
Q ss_pred CCCcccCCCCCeeeccccCCCEEEEEEecCCCHH-hHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhH
Q 008311 327 LQPLVDGSTKRRVNIEVLRRKNVLLLISDLDISQ-EELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQ 403 (570)
Q Consensus 327 ~~pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpP-Cr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~ 403 (570)
+...+.+.+| .+++++++||+|+|+|||+||+| |+.++ |.++|+++++. +.++++||+|++ |...+ +.+..
T Consensus 17 p~f~l~~~~g-~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~---~~~~v~vv~is~-d~~~d-~~~~~ 90 (172)
T 2k6v_A 17 VDFALEGPQG-PVRLSQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPK---AQERVQVIFVSV-DPERD-PPEVA 90 (172)
T ss_dssp CCCEEECSSS-EEEGGGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHH---HHTTEEEEEEES-CTTTC-CHHHH
T ss_pred CCeEEEcCCC-CCcHHHhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhh---ccCCEEEEEEEE-CCCCC-CHHHH
Confidence 3445677899 99999999999999999999998 99999 99999998631 113799999997 32100 12334
Q ss_pred HHHHHHHcCCCceeeccccccChH-HHHHHHHhCC---------------CCCCceEEEECCCCcEEccc
Q 008311 404 KKFETLQSSMPWYTVYHPTLIDRA-VIRYVKDVWH---------------FKNKPILVVLDPQGRVVSPN 457 (570)
Q Consensus 404 ~~F~~~~~~MPW~aV~fP~l~D~~-~~~~L~~~y~---------------V~~IPtlVVLDpqGkVv~~n 457 (570)
+.|.+. ...+|..+. |.. ....+.+.|+ +.++|+++|+| +|+|+...
T Consensus 91 ~~~~~~-~~~~~~~l~-----d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~ 153 (172)
T 2k6v_A 91 DRYAKA-FHPSFLGLS-----GSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLY 153 (172)
T ss_dssp HHHHHH-HCTTEEEEC-----CCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEE
T ss_pred HHHHHH-hCCCcEEEe-----CCHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEE
Confidence 445432 234554433 432 2345666666 46899999999 99998753
No 79
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.55 E-value=2.7e-14 Score=133.64 Aligned_cols=121 Identities=10% Similarity=0.110 Sum_probs=82.3
Q ss_pred CCCcccCCCCCeeeccccCCCEEEEEEecCCCH-HhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhH
Q 008311 327 LQPLVDGSTKRRVNIEVLRRKNVLLLISDLDIS-QEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQ 403 (570)
Q Consensus 327 ~~pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCp-PCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~ 403 (570)
+...+.+.+|+.+++++|+||+|+|+||++||| +|..++ |.++++.+++ .+.++++|+||+ |...+ +.+..
T Consensus 13 PdF~L~d~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~----~~~~v~~v~isv-Dp~~D-tp~~l 86 (170)
T 4hde_A 13 ETFQFTNQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKE----EKLDVQFVSFSV-DPDLD-KPENL 86 (170)
T ss_dssp CCCEEECTTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHH----TTCCCEEEEEES-CTTTC-CHHHH
T ss_pred CCcEEECCCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhc----ccccceeEeeec-Ccccc-cHHHH
Confidence 344567899999999999999999999999997 899999 9999999974 256899999997 42100 12233
Q ss_pred HHHHHHHc--CCCceeeccccccChH-HHHHHHHhCC----------CCCCceEEEECCCCcEEcc
Q 008311 404 KKFETLQS--SMPWYTVYHPTLIDRA-VIRYVKDVWH----------FKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 404 ~~F~~~~~--~MPW~aV~fP~l~D~~-~~~~L~~~y~----------V~~IPtlVVLDpqGkVv~~ 456 (570)
++|.+.+. ...|..+..+ +.+ ..+.....|+ +..-|+++|||++|+|+..
T Consensus 87 ~~y~~~~~~~~~~~~~ltg~---~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~ 149 (170)
T 4hde_A 87 KAFIQKFTEDTSNWNLLTGY---SLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKK 149 (170)
T ss_dssp HHHHTTTCSCCTTEEEEBCS---CHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEE
T ss_pred HHHHHHcCCCCCCceecCcc---cHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEE
Confidence 44543221 2246555432 212 2223333333 3345799999999999853
No 80
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.54 E-value=3.3e-15 Score=138.06 Aligned_cols=108 Identities=18% Similarity=0.134 Sum_probs=81.0
Q ss_pred CcccCCCCCeeeccccCCCEEEEEEe-cCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHH
Q 008311 329 PLVDGSTKRRVNIEVLRRKNVLLLIS-DLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKK 405 (570)
Q Consensus 329 pl~~g~~G~~Vsls~LkGKvVlL~Fw-AsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~ 405 (570)
..+.+.+|+.+++++++||+|+|+|| ++||++|+.++ |.++|+++ . +++||+||+ | +.+..++
T Consensus 26 f~l~~~~G~~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~-------~v~vv~Is~-d-----~~~~~~~ 91 (165)
T 1q98_A 26 FILVGNDLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-S-------NTIVLCISA-D-----LPFAQAR 91 (165)
T ss_dssp CEEECTTSCEEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-T-------TEEEEEEES-S-----CHHHHTT
T ss_pred eEEECCCCCEEehHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-C-------CCEEEEEeC-C-----CHHHHHH
Confidence 34568899999999999999999999 89999999999 99999987 2 599999996 2 2222223
Q ss_pred HHHHHcCCCceee-ccccccChHHHHHHHHhCCCCC---------CceEEEECCCCcEEccc
Q 008311 406 FETLQSSMPWYTV-YHPTLIDRAVIRYVKDVWHFKN---------KPILVVLDPQGRVVSPN 457 (570)
Q Consensus 406 F~~~~~~MPW~aV-~fP~l~D~~~~~~L~~~y~V~~---------IPtlVVLDpqGkVv~~n 457 (570)
| ..+. .+ +||.+.|. ....+.+.|++.. .|+++|||++|+|+...
T Consensus 92 ~---~~~~---~~~~~~~l~D~-~~~~~~~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~ 146 (165)
T 1q98_A 92 F---CGAE---GIENAKTVSTF-RNHALHSQLGVDIQTGPLAGLTSRAVIVLDEQNNVLHSQ 146 (165)
T ss_dssp C---TTTT---TCTTEEEEECT-TCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEE
T ss_pred H---HHHc---CCCceEEeecc-ccchHHHHhCceecccccCCccceeEEEEcCCCEEEEEE
Confidence 3 2222 23 34545563 1246788898853 59999999999998764
No 81
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.54 E-value=1e-14 Score=152.94 Aligned_cols=111 Identities=14% Similarity=0.123 Sum_probs=83.9
Q ss_pred cCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHH
Q 008311 332 DGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETL 409 (570)
Q Consensus 332 ~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~ 409 (570)
.+.+|+.+++++++||+|+|+|||+||++|+.++ |.++|+++++ .+++||.|++.+.. .+.+.+.++++
T Consensus 68 ~d~dG~~vsLsdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~------~~v~vi~Vs~d~~~---~~d~~~~~~~~ 138 (352)
T 2hyx_A 68 NTPGNKPIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKD------SGLAVIGVHTPEYA---FEKVPGNVAKG 138 (352)
T ss_dssp SSGGGCCCCGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG------GTEEEEEEECCSSG---GGGCHHHHHHH
T ss_pred CCCCCCEEcHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhc------CCeEEEEEECCccc---ccCCHHHHHHH
Confidence 3678999999999999999999999999999999 9999999963 36999999862100 01233344443
Q ss_pred HcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 410 QSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 410 ~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+. .++||.+.|. ...+.+.|++.++|+++|||++|+|+..
T Consensus 139 ~~~~---~l~fpv~~D~--~~~l~~~ygV~~~Pt~~lID~~G~Iv~~ 180 (352)
T 2hyx_A 139 AANL---GISYPIALDN--NYATWTNYRNRYWPAEYLIDATGTVRHI 180 (352)
T ss_dssp HHHH---TCCSCEEECT--TSHHHHHTTCCEESEEEEECTTSBEEEE
T ss_pred HHHc---CCCccEEeCC--cHHHHHHcCCCccCEEEEEeCCCeEEEE
Confidence 3322 2345555564 2467889999999999999999999875
No 82
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.54 E-value=1.6e-14 Score=133.49 Aligned_cols=111 Identities=12% Similarity=0.111 Sum_probs=84.3
Q ss_pred CCCccc----CCCC--Ceeeccc-cCCCEEEEEEe-cCCCHHhH-HHH--HHHHHHHHhhhhhccCCCeE-EEEEecccC
Q 008311 327 LQPLVD----GSTK--RRVNIEV-LRRKNVLLLIS-DLDISQEE-LSI--LEQIYNESRLHLTRQESHYE-VVWIPIVDH 394 (570)
Q Consensus 327 ~~pl~~----g~~G--~~Vsls~-LkGKvVlL~Fw-AsWCpPCr-~e~--L~~iY~elk~~~~k~~~~fE-IV~IsIvD~ 394 (570)
..|.|. +.+| +++++++ ++||+|+|+|| |+|||+|+ .++ |.++|+++++ .+++ ||+||. |
T Consensus 9 ~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~------~~v~~vv~Is~-d- 80 (162)
T 1tp9_A 9 VLPDGKLAYFDEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKS------KGVTEILCISV-N- 80 (162)
T ss_dssp BCCCCEEEEECTTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHH------TTCCCEEEEES-S-
T ss_pred CCCCeEEEeecCCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHH------CCCCEEEEEEC-C-
Confidence 455543 6789 9999999 99999999999 89999999 899 9999999973 3799 999996 3
Q ss_pred CCCCChhhHHHHHHHHcCCCceeeccccccChHHHHHHHHhCCCC------C-----CceEEEECCCCcEEcc
Q 008311 395 FIHWDDPTQKKFETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFK------N-----KPILVVLDPQGRVVSP 456 (570)
Q Consensus 395 s~~w~D~~~~~F~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~------~-----IPtlVVLDpqGkVv~~ 456 (570)
+.+..++|.+. ... -. +||.+.|.. ..+.+.||+. | +|+++||| +|+|+..
T Consensus 81 ----~~~~~~~~~~~-~~~--~~-~~~~l~D~~--~~~~~~~gv~~~~~~~g~~~~~~p~~~vid-~G~i~~~ 142 (162)
T 1tp9_A 81 ----DPFVMKAWAKS-YPE--NK-HVKFLADGS--ATYTHALGLELDLQEKGLGTRSRRFALLVD-DLKVKAA 142 (162)
T ss_dssp ----CHHHHHHHHHT-CTT--CS-SEEEEECTT--SHHHHHTTCEEEETTTTSEEEECCEEEEEE-TTEEEEE
T ss_pred ----CHHHHHHHHHh-cCC--CC-CeEEEECCC--chHHHHcCcccccccCCCCccceeEEEEEE-CCEEEEE
Confidence 23344555431 122 11 455566753 5688899986 3 89999999 9999876
No 83
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.53 E-value=1e-14 Score=135.08 Aligned_cols=106 Identities=15% Similarity=0.161 Sum_probs=79.9
Q ss_pred cccCCCCCeeeccccCCCEEEEEEe-cCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHH
Q 008311 330 LVDGSTKRRVNIEVLRRKNVLLLIS-DLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKF 406 (570)
Q Consensus 330 l~~g~~G~~Vsls~LkGKvVlL~Fw-AsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F 406 (570)
.+.+.+|+.+++++++||+|+|+|| ++|||+|+.++ |.++|+++ . +++||+|++ | +.+..++|
T Consensus 31 ~l~~~~G~~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~-------~v~vv~Is~-d-----~~~~~~~~ 96 (171)
T 2yzh_A 31 VVVTKDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM-E-------GVDVTVVSM-D-----LPFAQKRF 96 (171)
T ss_dssp EEEETTSCEEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T-------TEEEEEEES-S-----CHHHHHHH
T ss_pred EEECCCCCEeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-C-------CceEEEEeC-C-----CHHHHHHH
Confidence 4567899999999999999999999 89999999999 99998877 2 699999996 3 23344555
Q ss_pred HHHHcCCCceeeccccccC-hHHHHHHHHhCCCC-------C--CceEEEECCCCcEEccc
Q 008311 407 ETLQSSMPWYTVYHPTLID-RAVIRYVKDVWHFK-------N--KPILVVLDPQGRVVSPN 457 (570)
Q Consensus 407 ~~~~~~MPW~aV~fP~l~D-~~~~~~L~~~y~V~-------~--IPtlVVLDpqGkVv~~n 457 (570)
.+. ...+ +||.+.| . ...+ +.|++. + .|+++|||++|+|+...
T Consensus 97 ~~~-~~~~----~~~~l~D~~--~~~~-~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~ 149 (171)
T 2yzh_A 97 CES-FNIQ----NVTVASDFR--YRDM-EKYGVLIGEGALKGILARAVFIIDKEGKVAYVQ 149 (171)
T ss_dssp HHH-TTCC----SSEEEECTT--TCGG-GGGTCBBCSSTTTTSBCCEEEEECTTSBEEEEE
T ss_pred HHH-cCCC----CeEEeecCc--cCcH-HHhCCEecccccCCceeeEEEEEcCCCeEEEEE
Confidence 442 2330 3444446 3 2346 889885 2 69999999999998763
No 84
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.53 E-value=1.3e-14 Score=140.93 Aligned_cols=113 Identities=16% Similarity=0.127 Sum_probs=84.9
Q ss_pred cccCC--CC--Ceeecccc-CCCEEEEEEe-cCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChh
Q 008311 330 LVDGS--TK--RRVNIEVL-RRKNVLLLIS-DLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDP 401 (570)
Q Consensus 330 l~~g~--~G--~~Vsls~L-kGKvVlL~Fw-AsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~ 401 (570)
.+.+. +| +.++++++ +||+|+|+|| |+||++|+.++ |.++|+++++ .+++||+|++ | +.+
T Consensus 31 ~l~~~~~~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~------~~v~vv~Is~-D-----~~~ 98 (213)
T 2i81_A 31 KAEAVFGDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHE------RNVELLGCSV-D-----SKY 98 (213)
T ss_dssp EEEEECTTSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHH------TTEEEEEEES-S-----CHH
T ss_pred EeeccccCCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHH------CCCEEEEEeC-C-----CHH
Confidence 34455 78 89999999 9999999999 99999999999 9999999973 4799999996 3 233
Q ss_pred hHHHHHHHHcCC-CceeeccccccChHHHHHHHHhCCCC-----CCceEEEECCCCcEEcc
Q 008311 402 TQKKFETLQSSM-PWYTVYHPTLIDRAVIRYVKDVWHFK-----NKPILVVLDPQGRVVSP 456 (570)
Q Consensus 402 ~~~~F~~~~~~M-PW~aV~fP~l~D~~~~~~L~~~y~V~-----~IPtlVVLDpqGkVv~~ 456 (570)
..+.|.+..... .--.++||.+.|. ...+.+.|++. .+|+++|||++|+|+..
T Consensus 99 ~~~~~~~~~~~~~g~~~~~fp~l~D~--~~~~~~~ygv~~~~g~~~p~~~lID~~G~i~~~ 157 (213)
T 2i81_A 99 THLAWKKTPLAKGGIGNIKHTLLSDI--TKSISKDYNVLFDDSVSLRAFVLIDMNGIVQHL 157 (213)
T ss_dssp HHHHHHSSCGGGTCCCSCSSEEEECT--TSHHHHHTTCEETTTEECEEEEEECTTSBEEEE
T ss_pred HHHHHHHHHHhhCCccCCCceEEECC--chHHHHHhCCccccCCcccEEEEECCCCEEEEE
Confidence 344443321100 0002345555564 35688999999 89999999999999876
No 85
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.53 E-value=1.2e-14 Score=132.96 Aligned_cols=107 Identities=14% Similarity=0.172 Sum_probs=82.7
Q ss_pred CcccCCCCCeeeccccCCC--EEEEEEe-cCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhH
Q 008311 329 PLVDGSTKRRVNIEVLRRK--NVLLLIS-DLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQ 403 (570)
Q Consensus 329 pl~~g~~G~~Vsls~LkGK--vVlL~Fw-AsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~ 403 (570)
..+.+.+|+.+++++++|| +|+|+|| |+|||+|+.++ |.++|+++++ .+ +||+|+. | +.+..
T Consensus 16 f~l~~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~------~~-~vv~is~-d-----~~~~~ 82 (159)
T 2a4v_A 16 LSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKE------YA-AVFGLSA-D-----SVTSQ 82 (159)
T ss_dssp CEEECTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTT------TC-EEEEEES-C-----CHHHH
T ss_pred eEEECCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHh------CC-cEEEEeC-C-----CHHHH
Confidence 4456789999999999997 8999987 99999999999 9999999963 35 9999996 2 23344
Q ss_pred HHHHHHHcCCCceeeccccccChHHHHHHHHhCCCCCCc------eEEEECCCCcEEccc
Q 008311 404 KKFETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKP------ILVVLDPQGRVVSPN 457 (570)
Q Consensus 404 ~~F~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IP------tlVVLDpqGkVv~~n 457 (570)
+.|.+. ..+ +||.+.|. ...+.+.|++...| +++|| ++|+|+...
T Consensus 83 ~~~~~~-~~~-----~~~~l~D~--~~~~~~~~gv~~~p~~g~~~~~~li-~~G~i~~~~ 133 (159)
T 2a4v_A 83 KKFQSK-QNL-----PYHLLSDP--KREFIGLLGAKKTPLSGSIRSHFIF-VDGKLKFKR 133 (159)
T ss_dssp HHHHHH-HTC-----SSEEEECT--TCHHHHHHTCBSSSSSCBCCEEEEE-ETTEEEEEE
T ss_pred HHHHHH-hCC-----CceEEECC--ccHHHHHhCCcccccCCccceEEEE-cCCEEEEEE
Confidence 555442 233 34555564 34678899999988 89999 999998763
No 86
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.52 E-value=3.1e-14 Score=127.74 Aligned_cols=109 Identities=15% Similarity=0.125 Sum_probs=79.7
Q ss_pred CCCcccCCCC--------CeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCC
Q 008311 327 LQPLVDGSTK--------RRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFI 396 (570)
Q Consensus 327 ~~pl~~g~~G--------~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~ 396 (570)
+...+.+.+| +.+++++++||+|+|+||++||++|+.++ |.+++++ .++++++|++.+
T Consensus 15 p~f~l~~~~g~~~~~~~~~~~~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~---------~~v~~v~v~~~~--- 82 (156)
T 1kng_A 15 PQTALPPLEGLQADNVQVPGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKD---------KRFQLVGINYKD--- 82 (156)
T ss_dssp CCCCBCCCTTCEETTEECCCBCGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHTTC---------TTSEEEEEEESC---
T ss_pred CCceeeeccCcccccccCceechHHhCCCEEEEEEEcccCHhHHHHHHHHHHHHhc---------CCeEEEEEECCC---
Confidence 3344556777 89999999999999999999999999988 7776643 259999999622
Q ss_pred CCChhhHHHHHHHHcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 397 HWDDPTQKKFETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 397 ~w~D~~~~~F~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
+.+..+.|.+. ..++|..+. .|. ...+.+.|++.++|+++++|++|+++..
T Consensus 83 --~~~~~~~~~~~-~~~~~~~~~----~d~--~~~~~~~~~v~~~P~~~~id~~G~i~~~ 133 (156)
T 1kng_A 83 --AADNARRFLGR-YGNPFGRVG----VDA--NGRASIEWGVYGVPETFVVGREGTIVYK 133 (156)
T ss_dssp --CHHHHHHHHHH-HCCCCSEEE----EET--TSHHHHHTTCCSSCEEEEECTTSBEEEE
T ss_pred --CHHHHHHHHHH-cCCCCceee----eCc--hhHHHHhcCcCccCeEEEEcCCCCEEEE
Confidence 23334444332 234544222 243 3468889999999999999999999864
No 87
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.52 E-value=2.1e-14 Score=134.55 Aligned_cols=109 Identities=12% Similarity=0.033 Sum_probs=82.8
Q ss_pred Cccc-CCCCCeeecccc-CCCEEEEEEe-cCCCHHhHH-HH--HHHHHHHHhhhhhccCCCe-EEEEEecccCCCCCChh
Q 008311 329 PLVD-GSTKRRVNIEVL-RRKNVLLLIS-DLDISQEEL-SI--LEQIYNESRLHLTRQESHY-EVVWIPIVDHFIHWDDP 401 (570)
Q Consensus 329 pl~~-g~~G~~Vsls~L-kGKvVlL~Fw-AsWCpPCr~-e~--L~~iY~elk~~~~k~~~~f-EIV~IsIvD~s~~w~D~ 401 (570)
..+. +.+|++++++++ +||+|+|+|| |+|||+|+. ++ |.++|+++++ .++ +||+||. | +..
T Consensus 12 f~l~~~~~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~------~gv~~vv~Is~-d-----~~~ 79 (167)
T 2wfc_A 12 VTVFGATPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHG------KGVDIIACMAV-N-----DSF 79 (167)
T ss_dssp CEEESSSTTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHH------TTCCEEEEEES-S-----CHH
T ss_pred cEeecCCCCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHH------CCCCEEEEEeC-C-----CHH
Confidence 3455 778999999998 9999988885 999999999 99 9999999973 479 9999996 3 233
Q ss_pred hHHHHHHHHcCCCceeeccccccChHHHHHHHHhCCCCC-----------CceEEEECCCCcEEcc
Q 008311 402 TQKKFETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKN-----------KPILVVLDPQGRVVSP 456 (570)
Q Consensus 402 ~~~~F~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~-----------IPtlVVLDpqGkVv~~ 456 (570)
..+.|.+- ..++. .||.+.|. ...+.+.|++.. .|+++|| ++|+|+..
T Consensus 80 ~~~~~~~~-~~~~~---~fp~l~D~--~~~~~~~~gv~~~~~~~~g~~~~~p~t~lI-~~G~I~~~ 138 (167)
T 2wfc_A 80 VMDAWGKA-HGADD---KVQMLADP--GGAFTKAVDMELDLSAVLGNVRSKRYSLVI-EDGVVTKV 138 (167)
T ss_dssp HHHHHHHH-TTCTT---TSEEEECT--TSHHHHHTTCEECCHHHHSSCEECCEEEEE-ETTEEEEE
T ss_pred HHHHHHHh-cCCCc---ceEEEECC--CCcHHHHcCCccccccccCcccceEEEEEE-eCCEEEEE
Confidence 44555442 23330 15556675 346888899864 3999999 99999876
No 88
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.52 E-value=8.2e-15 Score=146.93 Aligned_cols=116 Identities=15% Similarity=0.082 Sum_probs=87.1
Q ss_pred CCCccc-----CCCCCeeeccccCCCEEEEEEe-cCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCC
Q 008311 327 LQPLVD-----GSTKRRVNIEVLRRKNVLLLIS-DLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHW 398 (570)
Q Consensus 327 ~~pl~~-----g~~G~~Vsls~LkGKvVlL~Fw-AsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w 398 (570)
++|.|. +.+|+.+++++++||+|+|+|| ++||++|..++ |.++|+++++ .+++||+||+ |
T Consensus 67 ~aPdF~l~~l~d~~G~~vsLsd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~------~gv~vv~IS~-D----- 134 (254)
T 3tjj_A 67 PAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRS------INTEVVACSV-D----- 134 (254)
T ss_dssp BCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHT------TTEEEEEEES-S-----
T ss_pred CCCCcEeeeecCCCCcEEeHHHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHH------cCCEEEEEcC-C-----
Confidence 455554 5578899999999999999999 99999999999 9999999973 4799999996 3
Q ss_pred ChhhHHHHHHHH-cCCCceeeccccccChHHHHHHHHhCCCC------CCceEEEECCCCcEEcc
Q 008311 399 DDPTQKKFETLQ-SSMPWYTVYHPTLIDRAVIRYVKDVWHFK------NKPILVVLDPQGRVVSP 456 (570)
Q Consensus 399 ~D~~~~~F~~~~-~~MPW~aV~fP~l~D~~~~~~L~~~y~V~------~IPtlVVLDpqGkVv~~ 456 (570)
+......|.+.. ....-..++||.+.|.. ..+.+.|++. .+|+++|||++|+|+..
T Consensus 135 ~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~--~~va~~ygv~~~~~g~~~p~tflID~~G~I~~~ 197 (254)
T 3tjj_A 135 SQFTHLAWINTPRRQGGLGPIRIPLLSDLT--HQISKDYGVYLEDSGHTLRGLFIIDDKGILRQI 197 (254)
T ss_dssp CHHHHHHHHTSCGGGTSCCSCSSCEEECTT--SHHHHHHTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred CHHHHHHHHHHHHHhcCCcccccceeeCcH--HHHHHHcCCccccCCCccceEEEECCCCeEEEE
Confidence 234445554321 11000034566666753 5688899985 58999999999999876
No 89
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.52 E-value=7.1e-15 Score=134.95 Aligned_cols=109 Identities=15% Similarity=0.046 Sum_probs=81.5
Q ss_pred CCcccCCCCCeeeccccCCCEEEEEEecCC-CHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHH
Q 008311 328 QPLVDGSTKRRVNIEVLRRKNVLLLISDLD-ISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQK 404 (570)
Q Consensus 328 ~pl~~g~~G~~Vsls~LkGKvVlL~FwAsW-CpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~ 404 (570)
...+.+.+|+.+++++++||+|+|+||++| |++|+.++ |.++|+++ . +++||+|++ | +.+..+
T Consensus 26 ~f~l~~~~G~~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~-------~~~vv~is~-d-----~~~~~~ 91 (167)
T 2jsy_A 26 DFTVLTNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-G-------DVNVYTISA-D-----LPFAQA 91 (167)
T ss_dssp CCEEEBTTCCEEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-S-------SCEEEEEEC-S-----SGGGTS
T ss_pred ceEEECCCCCEeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-C-------CCEEEEEEC-C-----CHHHHH
Confidence 344568899999999999999999999999 99999999 99999988 2 599999996 3 122222
Q ss_pred HHHHHHcCCCceeeccccccC-hHHHHHHHHhCCCCC------CceEEEECCCCcEEccc
Q 008311 405 KFETLQSSMPWYTVYHPTLID-RAVIRYVKDVWHFKN------KPILVVLDPQGRVVSPN 457 (570)
Q Consensus 405 ~F~~~~~~MPW~aV~fP~l~D-~~~~~~L~~~y~V~~------IPtlVVLDpqGkVv~~n 457 (570)
.|. .+..+. +||.+.| . ...+.+.|++.. .|+++|||++|+|+...
T Consensus 92 ~~~---~~~~~~--~~~~~~d~~--~~~~~~~~~v~~~~~g~~~p~~~lid~~G~i~~~~ 144 (167)
T 2jsy_A 92 RWC---GANGID--KVETLSDHR--DMSFGEAFGVYIKELRLLARSVFVLDENGKVVYAE 144 (167)
T ss_dssp CCG---GGSSCT--TEEEEEGGG--TCHHHHHTTCBBTTTCSBCCEEEEECTTSCEEEEE
T ss_pred HHH---HhcCCC--CceEeeCCc--hhHHHHHhCCccccCCceeeEEEEEcCCCcEEEEE
Confidence 332 222211 3444445 3 245788899987 39999999999998764
No 90
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.50 E-value=1.4e-14 Score=139.22 Aligned_cols=108 Identities=20% Similarity=0.148 Sum_probs=81.6
Q ss_pred CcccCCCCCeeeccccCCCEEEEEEe-cCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHH
Q 008311 329 PLVDGSTKRRVNIEVLRRKNVLLLIS-DLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKK 405 (570)
Q Consensus 329 pl~~g~~G~~Vsls~LkGKvVlL~Fw-AsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~ 405 (570)
..+.+.+|+.+++++++||+|+|+|| ++||++|+.++ |.++|++++ +++||+||. | +.+..++
T Consensus 61 f~l~d~~G~~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~~--------~v~vv~Is~-D-----~~~~~~~ 126 (200)
T 3zrd_A 61 FTLVAKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGELE--------NTVVLCISS-D-----LPFAQSR 126 (200)
T ss_dssp CEEECTTSCEEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTST--------TEEEEEEES-S-----CHHHHTT
T ss_pred eEEECCCCCEEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHhC--------CCEEEEEEC-C-----CHHHHHH
Confidence 44568899999999999999999999 67999999999 999999872 599999995 2 2222233
Q ss_pred HHHHHcCCCceee-ccccccChHHHHHHHHhCCCC-------C--CceEEEECCCCcEEccc
Q 008311 406 FETLQSSMPWYTV-YHPTLIDRAVIRYVKDVWHFK-------N--KPILVVLDPQGRVVSPN 457 (570)
Q Consensus 406 F~~~~~~MPW~aV-~fP~l~D~~~~~~L~~~y~V~-------~--IPtlVVLDpqGkVv~~n 457 (570)
| ..+ +.+ +||.+.|.. ...+.+.|++. + .|+++|||++|+|+...
T Consensus 127 ~---~~~---~~~~~f~~l~D~~-~~~~~~~ygv~~~~~~~~g~~~p~~~lID~~G~I~~~~ 181 (200)
T 3zrd_A 127 F---CGA---EGLSNVITLSTLR-GADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVIYSE 181 (200)
T ss_dssp C---TTT---TTCTTEEEEETTS-CTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEE
T ss_pred H---HHH---cCCCCceEEecCc-hHHHHHHhCceeecccCCCccccEEEEECCCCeEEEEE
Confidence 3 222 233 455555641 34678889885 3 59999999999998764
No 91
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.50 E-value=1.5e-14 Score=135.05 Aligned_cols=106 Identities=16% Similarity=0.100 Sum_probs=79.8
Q ss_pred CcccCCCCCeeeccccCCCEEEEEEecCC-CHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHH
Q 008311 329 PLVDGSTKRRVNIEVLRRKNVLLLISDLD-ISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKK 405 (570)
Q Consensus 329 pl~~g~~G~~Vsls~LkGKvVlL~FwAsW-CpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~ 405 (570)
..+.+.+|+.+++++++||+|+|+||++| |++|+.++ |.++|++ + +++||+|++ | +.+..++
T Consensus 27 f~l~~~~G~~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~--------~v~vv~Is~-D-----~~~~~~~ 91 (175)
T 1xvq_A 27 FTLTGGDLGVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA-S--------GATVLCVSK-D-----LPFAQKR 91 (175)
T ss_dssp CEEECTTSCEEEGGGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH-T--------TCEEEEEES-S-----CHHHHTT
T ss_pred eEEECCCCCEEeHHHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh-c--------CCEEEEEEC-C-----CHHHHHH
Confidence 34567899999999999999999999999 99999999 9999987 3 589999996 3 2222233
Q ss_pred HHHHHcCCCceee-ccccccChHHHHHHHHhCCCCCC---------ceEEEECCCCcEEccc
Q 008311 406 FETLQSSMPWYTV-YHPTLIDRAVIRYVKDVWHFKNK---------PILVVLDPQGRVVSPN 457 (570)
Q Consensus 406 F~~~~~~MPW~aV-~fP~l~D~~~~~~L~~~y~V~~I---------PtlVVLDpqGkVv~~n 457 (570)
|. .+. .+ +||.+.|.. ..+.+.|++... |+++|||++|+|+...
T Consensus 92 ~~---~~~---~~~~~~~l~D~~--~~~~~~~gv~~~~~~~~g~~~p~~~lid~~G~I~~~~ 145 (175)
T 1xvq_A 92 FC---GAE---GTENVMPASAFR--DSFGEDYGVTIADGPMAGLLARAIVVIGADGNVAYTE 145 (175)
T ss_dssp CC------------CEEEEECTT--SSHHHHTTCBBCSSTTTTSBCSEEEEECTTSBEEEEE
T ss_pred HH---HHc---CCCCceEeeCCH--HHHHHHhCCcccccccCCcccceEEEECCCCeEEEEE
Confidence 32 221 22 344455642 467888999887 9999999999998763
No 92
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.49 E-value=8e-14 Score=127.53 Aligned_cols=106 Identities=17% Similarity=0.087 Sum_probs=77.2
Q ss_pred CcccCC--CCCeeecccc-CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhH
Q 008311 329 PLVDGS--TKRRVNIEVL-RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQ 403 (570)
Q Consensus 329 pl~~g~--~G~~Vsls~L-kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~ 403 (570)
..+.+. +|+.++++++ +||+|+|+|||+|||+|+.++ |.+++++ +++|++|++.+ +.+..
T Consensus 31 f~l~~~~~~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----------~v~vv~v~~~~-----~~~~~ 95 (168)
T 2b1k_A 31 FRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ----------GIRVVGMNYKD-----DRQKA 95 (168)
T ss_dssp CEEEESSSTTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----------TCCEEEEEESC-----CHHHH
T ss_pred eEeecccCCCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC----------CCEEEEEECCC-----ChHHH
Confidence 344566 8999999885 999999999999999999988 7776642 58899999722 23334
Q ss_pred HHHHHHHcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 404 KKFETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 404 ~~F~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..|.+. ...+|..+ +.|. ...+.+.|++.++|+++++|++|+++..
T Consensus 96 ~~~~~~-~~~~~~~~----~~d~--~~~~~~~~~v~~~P~~~lid~~G~i~~~ 141 (168)
T 2b1k_A 96 ISWLKE-LGNPYALS----LFDG--DGMLGLDLGVYGAPETFLIDGNGIIRYR 141 (168)
T ss_dssp HHHHHH-HCCCCSEE----EEET--TCHHHHHHTCCSSSEEEEECTTSBEEEE
T ss_pred HHHHHH-cCCCCcee----eECc--chHHHHHcCccccCEEEEECCCCeEEEE
Confidence 444332 23444321 1233 2457889999999999999999999864
No 93
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.48 E-value=5.2e-14 Score=134.45 Aligned_cols=130 Identities=14% Similarity=0.074 Sum_probs=90.8
Q ss_pred CCCcc--cCC--CC-Ceeeccc-cCCC-EEEEEEecCCCHHhHH-HH--HHHHHHHHhhhhhccCCCeE-EEEEecccCC
Q 008311 327 LQPLV--DGS--TK-RRVNIEV-LRRK-NVLLLISDLDISQEEL-SI--LEQIYNESRLHLTRQESHYE-VVWIPIVDHF 395 (570)
Q Consensus 327 ~~pl~--~g~--~G-~~Vsls~-LkGK-vVlL~FwAsWCpPCr~-e~--L~~iY~elk~~~~k~~~~fE-IV~IsIvD~s 395 (570)
..|.| .+. +| +.+++++ ++|| +|+++|||+|||+|+. ++ |+++|+++++ .+++ ||+||. |
T Consensus 31 ~aPdf~l~~~~~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~------~gv~~vv~Is~-d-- 101 (184)
T 3uma_A 31 KLPNATFKEKTADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILA------RGVDDIAVVAV-N-- 101 (184)
T ss_dssp BCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHT------TTCCEEEEEES-S--
T ss_pred CCCCcEeecccCCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHH------cCCCEEEEEEC-C--
Confidence 34444 455 78 9999999 8999 5566788999999999 88 9999999973 4788 999996 2
Q ss_pred CCCChhhHHHHHHHHcCCCceeeccccccChHHHHHHHHhCCCC-----------CCceEEEECCCCcEEccccchhHhh
Q 008311 396 IHWDDPTQKKFETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFK-----------NKPILVVLDPQGRVVSPNALHMMWI 464 (570)
Q Consensus 396 ~~w~D~~~~~F~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~-----------~IPtlVVLDpqGkVv~~na~~~I~~ 464 (570)
+....++|.+- ...| -.||.+.|.. ..+.+.||+. ..|.++||| +|+|+....
T Consensus 102 ---~~~~~~~f~~~-~~~~---~~fp~l~D~~--~~va~~yGv~~~~~~~g~g~~~~r~tfiId-dG~I~~~~~------ 165 (184)
T 3uma_A 102 ---DLHVMGAWATH-SGGM---GKIHFLSDWN--AAFTKAIGMEIDLSAGTLGIRSKRYSMLVE-DGVVKALNI------ 165 (184)
T ss_dssp ---CHHHHHHHHHH-HTCT---TTSEEEECTT--CHHHHHTTCEEEEGGGTCEEEECCEEEEEE-TTEEEEEEE------
T ss_pred ---CHHHHHHHHHH-hCCC---CceEEEEcCc--hHHHHHcCCceeccccCCcccceeEEEEEC-CCEEEEEEE------
Confidence 23345566542 2223 0166666753 5688899985 358899996 999987532
Q ss_pred hcCCCCCCCchhHHHHhh
Q 008311 465 WGSNAFPFTSLREEALWK 482 (570)
Q Consensus 465 ~G~~aFPFt~~~~e~L~~ 482 (570)
|.+.=+++.+..+++++
T Consensus 166 -~~~~g~~~~~~~~~vL~ 182 (184)
T 3uma_A 166 -EESPGQATASGAAAMLE 182 (184)
T ss_dssp -CSSTTCCSTTSHHHHHH
T ss_pred -eCCCCCCcCCCHHHHHh
Confidence 22223566666666654
No 94
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.48 E-value=4.8e-14 Score=133.41 Aligned_cols=110 Identities=15% Similarity=0.077 Sum_probs=80.3
Q ss_pred Cccc-CCCCCeeeccc-cCCCEE-EEEEecCCCHHhHH-HH--HHHHHHHHhhhhhccCCCeEEEE-EecccCCCCCChh
Q 008311 329 PLVD-GSTKRRVNIEV-LRRKNV-LLLISDLDISQEEL-SI--LEQIYNESRLHLTRQESHYEVVW-IPIVDHFIHWDDP 401 (570)
Q Consensus 329 pl~~-g~~G~~Vsls~-LkGKvV-lL~FwAsWCpPCr~-e~--L~~iY~elk~~~~k~~~~fEIV~-IsIvD~s~~w~D~ 401 (570)
..+. +.+|+.+++++ ++||+| +++|||+|||+|+. ++ |.+.|+++++ .+++||+ ||. | +..
T Consensus 24 f~l~~~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~------~gv~vv~~iS~-D-----~~~ 91 (173)
T 3mng_A 24 VEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKA------KGVQVVACLSV-N-----DAF 91 (173)
T ss_dssp CEEECSSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHT------TTCCEEEEEES-S-----CHH
T ss_pred eEeeeCCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHh------CCCEEEEEEcC-C-----CHH
Confidence 3345 77899999999 599955 55667999999994 88 9999999973 4799997 985 2 233
Q ss_pred hHHHHHHHHcCCCceeeccccccChHHHHHHHHhCCCC-------------CCceEEEECCCCcEEccc
Q 008311 402 TQKKFETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFK-------------NKPILVVLDPQGRVVSPN 457 (570)
Q Consensus 402 ~~~~F~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~-------------~IPtlVVLDpqGkVv~~n 457 (570)
..++|.+- ...+ .+||.+.|. ...+.+.||+. ..|.++||| +|+|+...
T Consensus 92 ~~~~f~~~-~~~~---~~fp~l~D~--~~~va~~yGv~~~~~~~~~~g~~~~~r~tfvID-dG~I~~~~ 153 (173)
T 3mng_A 92 VTGEWGRA-HKAE---GKVRLLADP--TGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ-DGIVKALN 153 (173)
T ss_dssp HHHHHHHH-TTCT---TTCEEEECT--TCHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE-TTEEEEEE
T ss_pred HHHHHHHH-hCCC---CceEEEECC--ChHHHHHhCCCcccccccccCCcceEEEEEEEE-CCEEEEEE
Confidence 45566542 2222 126666675 34688888875 359999999 99998763
No 95
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.47 E-value=8.9e-14 Score=136.52 Aligned_cols=115 Identities=10% Similarity=0.060 Sum_probs=84.2
Q ss_pred CCcccCCCCCeeeccccCCC--EEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhH
Q 008311 328 QPLVDGSTKRRVNIEVLRRK--NVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQ 403 (570)
Q Consensus 328 ~pl~~g~~G~~Vsls~LkGK--vVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~ 403 (570)
...+.+.+| ++++++++|| +|+++|||+|||+|..++ |.++|+++++ .+++||+||+ | +....
T Consensus 13 ~F~l~~~~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~------~~v~vi~IS~-D-----~~~~~ 79 (224)
T 1prx_A 13 NFEANTTVG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAK------RNVKLIALSI-D-----SVEDH 79 (224)
T ss_dssp CCEEEETTE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHT------TTEEEEEEES-S-----CHHHH
T ss_pred CcEEecCCC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHH------CCCEEEEEcC-C-----CHHHH
Confidence 344567788 9999999998 677788999999999999 9999999963 4799999996 3 23344
Q ss_pred HHHHHH-HcCCCc---eeeccccccChHHHHHHHHhCCCC------------CCceEEEECCCCcEEccc
Q 008311 404 KKFETL-QSSMPW---YTVYHPTLIDRAVIRYVKDVWHFK------------NKPILVVLDPQGRVVSPN 457 (570)
Q Consensus 404 ~~F~~~-~~~MPW---~aV~fP~l~D~~~~~~L~~~y~V~------------~IPtlVVLDpqGkVv~~n 457 (570)
..|.+. .....- ..++||.+.|. ...+.+.|++. .+|+++|||++|+|+...
T Consensus 80 ~~~~~~i~~~~~~~~~~~~~fpil~D~--~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~ 147 (224)
T 1prx_A 80 LAWSKDINAYNSEEPTEKLPFPIIDDR--NRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSI 147 (224)
T ss_dssp HHHHHHHHHHTTSCCCSCCSSCEEECT--TCHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEE
T ss_pred HHHHHHHHHhhCcccccCcCcceeecC--chHHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEEE
Confidence 455432 111110 23456666674 34678889873 379999999999998753
No 96
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.45 E-value=9.1e-14 Score=136.07 Aligned_cols=114 Identities=8% Similarity=0.043 Sum_probs=83.5
Q ss_pred CcccCC--CCCeeeccccCCC--EEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhh
Q 008311 329 PLVDGS--TKRRVNIEVLRRK--NVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPT 402 (570)
Q Consensus 329 pl~~g~--~G~~Vsls~LkGK--vVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~ 402 (570)
..+.+. +| ++++++++|| +|+++|||+|||+|..++ |.++|+++++ .+++||+||+ | +...
T Consensus 12 F~l~~~~~~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~------~~v~vi~vS~-D-----~~~~ 78 (220)
T 1xcc_A 12 FTAKASGIDG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLK------LNCKLIGFSC-N-----SKES 78 (220)
T ss_dssp CEECBTTCSS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHT------TTEEEEEEES-S-----CHHH
T ss_pred cEeecccCCC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH------cCCEEEEEeC-C-----CHHH
Confidence 344566 78 8999999998 666677999999999999 9999999973 4799999996 3 2334
Q ss_pred HHHHHHHHcCC-CceeeccccccChHHHHHHHHhCCCC------------CCceEEEECCCCcEEccc
Q 008311 403 QKKFETLQSSM-PWYTVYHPTLIDRAVIRYVKDVWHFK------------NKPILVVLDPQGRVVSPN 457 (570)
Q Consensus 403 ~~~F~~~~~~M-PW~aV~fP~l~D~~~~~~L~~~y~V~------------~IPtlVVLDpqGkVv~~n 457 (570)
.+.|.+..... .=..++||.+.|. .+.+.+.|++. .+|+++|||++|+|+...
T Consensus 79 ~~~~~~~i~~~~~~~~~~fpil~D~--~~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~ 144 (220)
T 1xcc_A 79 HDKWIEDIKYYGKLNKWEIPIVCDE--SRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATV 144 (220)
T ss_dssp HHHHHHHHHHHHTCSCCCCCEEECT--TSHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEEE
T ss_pred HHHHHHHHHHHhcCCCCcceeEECc--hhHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEEE
Confidence 45554321100 0034567766675 34688889983 379999999999998763
No 97
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.45 E-value=7.2e-14 Score=138.48 Aligned_cols=114 Identities=8% Similarity=0.050 Sum_probs=85.0
Q ss_pred CCcccCCCCCeeeccccCCC-EEEEEEe-cCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhH
Q 008311 328 QPLVDGSTKRRVNIEVLRRK-NVLLLIS-DLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQ 403 (570)
Q Consensus 328 ~pl~~g~~G~~Vsls~LkGK-vVlL~Fw-AsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~ 403 (570)
...+.+.+| ++++++++|| +|+|+|| |+|||+|..++ |.++|+++++ .+++||+||+ | +....
T Consensus 11 dF~l~~~~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~------~~v~vigIS~-D-----~~~~~ 77 (233)
T 2v2g_A 11 NFEADSTIG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKK------RGVKLIALSC-D-----NVADH 77 (233)
T ss_dssp CCEEEETTC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHH------TTEEEEEEES-S-----CHHHH
T ss_pred CcEEecCCC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHH------cCCEEEEEcC-C-----CHHHH
Confidence 344567788 8999999998 9999998 99999999999 9999999973 4799999996 3 23344
Q ss_pred HHHHHHHc---CCCceeeccccccChHHHHHHHHhCCCC------------CCceEEEECCCCcEEccc
Q 008311 404 KKFETLQS---SMPWYTVYHPTLIDRAVIRYVKDVWHFK------------NKPILVVLDPQGRVVSPN 457 (570)
Q Consensus 404 ~~F~~~~~---~MPW~aV~fP~l~D~~~~~~L~~~y~V~------------~IPtlVVLDpqGkVv~~n 457 (570)
+.|.+... +.. ..++||.+.|. .+.+.+.|++. .+|+++|||++|+|+...
T Consensus 78 ~~~~~~i~~~~~~~-~~~~fpil~D~--~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~ 143 (233)
T 2v2g_A 78 KEWSEDVKCLSGVK-GDMPYPIIADE--TRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSI 143 (233)
T ss_dssp HHHHHHHHHHHTCC-SSCSSCEEECT--TCHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEE
T ss_pred HHHHHHHHHhhCcc-cCCceEEEECC--hHHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEEE
Confidence 55544211 110 02356666674 34688889984 589999999999998753
No 98
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.45 E-value=8.8e-14 Score=139.49 Aligned_cols=112 Identities=11% Similarity=0.072 Sum_probs=84.9
Q ss_pred cccCCCCCeeec-ccc--CCCE-EEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhH
Q 008311 330 LVDGSTKRRVNI-EVL--RRKN-VLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQ 403 (570)
Q Consensus 330 l~~g~~G~~Vsl-s~L--kGKv-VlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~ 403 (570)
.+.+.+| ++++ +++ +||+ |+++|||+||++|..++ |.++|+++++ .+++||+||+ | +....
T Consensus 15 ~l~~~~G-~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~------~gv~VI~VS~-D-----s~~~~ 81 (249)
T 3a2v_A 15 EVTTDHG-VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQR------LGVDLIGLSV-D-----SVFSH 81 (249)
T ss_dssp EEEETTE-EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHH------TTEEEEEEES-S-----CHHHH
T ss_pred EEEcCCC-CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHh------CCcEEEEEEC-C-----CHHHH
Confidence 3445677 7999 999 9995 56689999999999999 9999999973 3799999996 3 23444
Q ss_pred HHHHHHHcCCCceeeccccccChHHHHHHHHhCCCC-------CCceEEEECCCCcEEcc
Q 008311 404 KKFETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFK-------NKPILVVLDPQGRVVSP 456 (570)
Q Consensus 404 ~~F~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~-------~IPtlVVLDpqGkVv~~ 456 (570)
..|.+...+..-..++||.+.|. .+.+.+.|++. ++|+++|||++|+|+..
T Consensus 82 ~~w~~~~~~~~~~~i~fPil~D~--~~~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~ 139 (249)
T 3a2v_A 82 IKWKEWIERHIGVRIPFPIIADP--QGTVARRLGLLHAESATHTVRGVFIVDARGVIRTM 139 (249)
T ss_dssp HHHHHHHHHHTCCCCCSCEEECT--TSHHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEE
T ss_pred HHHHHHHHHhcCCCCceeEEECC--chHHHHHhCCccccCCCcccceEEEECCCCeEEEE
Confidence 55654221111125667777674 35688899987 89999999999999875
No 99
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.42 E-value=2.1e-13 Score=127.83 Aligned_cols=101 Identities=9% Similarity=0.040 Sum_probs=75.5
Q ss_pred Ceeecccc-CCC-EEEEEEecCCCHHhHHH-H--HHHHHHHHhhhhhccCCCeE-EEEEecccCCCCCChhhHHHHHHHH
Q 008311 337 RRVNIEVL-RRK-NVLLLISDLDISQEELS-I--LEQIYNESRLHLTRQESHYE-VVWIPIVDHFIHWDDPTQKKFETLQ 410 (570)
Q Consensus 337 ~~Vsls~L-kGK-vVlL~FwAsWCpPCr~e-~--L~~iY~elk~~~~k~~~~fE-IV~IsIvD~s~~w~D~~~~~F~~~~ 410 (570)
++++++++ +|| +|+++|||+|||||+.+ + |.++|+++++ .+++ ||+||. | +....+.|.+-.
T Consensus 33 ~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~------~g~~~vv~Is~-d-----~~~~~~~~~~~~ 100 (171)
T 2pwj_A 33 STTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKA------KGVDSVICVAI-N-----DPYTVNAWAEKI 100 (171)
T ss_dssp CCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHH------TTCSEEEEEES-S-----CHHHHHHHHHHT
T ss_pred ceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHH------CCCCEEEEEeC-C-----CHHHHHHHHHHh
Confidence 89999996 996 77889999999999999 8 9999999973 3689 999996 2 233445554421
Q ss_pred cCCCceeeccccccChHHHHHHHHhCCCCC-----------CceEEEECCCCcEEcc
Q 008311 411 SSMPWYTVYHPTLIDRAVIRYVKDVWHFKN-----------KPILVVLDPQGRVVSP 456 (570)
Q Consensus 411 ~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~-----------IPtlVVLDpqGkVv~~ 456 (570)
.+ ..+||.+.|. ...+.+.||+.. .|++++|| +|+|+..
T Consensus 101 -~~---~~~fp~l~D~--~~~~~~~ygv~~~~~~~~~g~~~~~~t~~I~-~G~I~~~ 150 (171)
T 2pwj_A 101 -QA---KDAIEFYGDF--DGSFHKSLELTTDLSAGLLGIRSERWSAYVV-DGKVKAL 150 (171)
T ss_dssp -TC---TTTSEEEECT--TCHHHHHHTCEEECTTTTCCEEECCEEEEEE-TTEEEEE
T ss_pred -CC---CCceEEEECC--ccHHHHHhCCccccccccCCcccceeEEEEE-CCEEEEE
Confidence 21 1246666675 345778888752 57889999 9999875
No 100
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.34 E-value=1.6e-12 Score=128.05 Aligned_cols=115 Identities=13% Similarity=0.131 Sum_probs=89.3
Q ss_pred CCCccc-----CCCCCeeeccccCCCEEEEEEe-cCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCC
Q 008311 327 LQPLVD-----GSTKRRVNIEVLRRKNVLLLIS-DLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHW 398 (570)
Q Consensus 327 ~~pl~~-----g~~G~~Vsls~LkGKvVlL~Fw-AsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w 398 (570)
++|.|. +.+|++|++++++||+|+|+|| +.|||.|..++ +.+.|+++++ .+.+||+||. |
T Consensus 28 ~APdF~l~a~~d~~~~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~------~g~~vigiS~-D----- 95 (216)
T 3sbc_A 28 QAPTFKKTAVVDGVFDEVSLDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEE------QGAQVLFAST-D----- 95 (216)
T ss_dssp BCCCCCEEEEETTEEEEECGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHH------TTEEEEEEES-S-----
T ss_pred cCCCCCCcceECCCCcEEehHHhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhcc------CCceEEEeec-C-----
Confidence 456554 5577899999999999999999 99999999999 9999999974 4799999996 3
Q ss_pred ChhhHHHHHHH-HcCCCceeeccccccChHHHHHHHHhCCCC------CCceEEEECCCCcEEc
Q 008311 399 DDPTQKKFETL-QSSMPWYTVYHPTLIDRAVIRYVKDVWHFK------NKPILVVLDPQGRVVS 455 (570)
Q Consensus 399 ~D~~~~~F~~~-~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~------~IPtlVVLDpqGkVv~ 455 (570)
+......|.+. .....-..++||.+.|. .+.+.+.||+- ..+.++||||+|+|..
T Consensus 96 s~~sh~aw~~~~~~~~~~~~l~fpllsD~--~~~vak~YGv~~~~~g~~~R~tFiID~~G~Ir~ 157 (216)
T 3sbc_A 96 SEYSLLAWTNIPRKEGGLGPINIPLLADT--NHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRH 157 (216)
T ss_dssp CHHHHHHHHTSCGGGTCCCSCSSCEEECT--TSHHHHHHTCEETTTTEECEEEEEECTTSBEEE
T ss_pred chhhHHHHHHHHHHhCCccCcccceEeCC--CCHHHHHcCCeeccCCceeeEEEEECCCCeEEE
Confidence 34456667542 22222235778877775 45789999982 3578999999999965
No 101
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.27 E-value=8.5e-12 Score=123.09 Aligned_cols=115 Identities=14% Similarity=0.161 Sum_probs=91.7
Q ss_pred CCCccc------CCCCCeeeccccCCCEEEEEEe-cCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCC
Q 008311 327 LQPLVD------GSTKRRVNIEVLRRKNVLLLIS-DLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIH 397 (570)
Q Consensus 327 ~~pl~~------g~~G~~Vsls~LkGKvVlL~Fw-AsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~ 397 (570)
++|.|. +.+|++|++++++||+|+|+|+ +.|||.|..|+ +.+.|+++++ .+.+||+||. |
T Consensus 31 ~APdF~~~a~l~d~~g~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~------~g~~vigiS~-D---- 99 (219)
T 3tue_A 31 PAPSFEEVALMPNGSFKKISLSSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNE------LNCEVLACSI-D---- 99 (219)
T ss_dssp BCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHT------TTEEEEEEES-S----
T ss_pred cCCCCcccccccCCCCcEEehHHhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhcc------CCcEEEEeeC-C----
Confidence 466664 5688899999999999999999 89999999999 9999999973 4899999996 3
Q ss_pred CChhhHHHHHH-HHcCCCceeeccccccChHHHHHHHHhCCC----CCCc--eEEEECCCCcEEc
Q 008311 398 WDDPTQKKFET-LQSSMPWYTVYHPTLIDRAVIRYVKDVWHF----KNKP--ILVVLDPQGRVVS 455 (570)
Q Consensus 398 w~D~~~~~F~~-~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V----~~IP--tlVVLDpqGkVv~ 455 (570)
+.....+|.+ ...+..-..++||.+.|. .+.+.+.||+ .+++ .++||||+|+|..
T Consensus 100 -s~~sh~~w~~~~~~~~~~~~l~fpllsD~--~~~va~~yGv~~~~~g~~~R~tFiIDp~g~Ir~ 161 (219)
T 3tue_A 100 -SEYAHLQWTLQDRKKGGLGTMAIPILADK--TKNIARSYGVLEESQGVAYRGLFIIDPHGMLRQ 161 (219)
T ss_dssp -CHHHHHHHHHSCGGGTCCCSCSSCEEECT--TSHHHHHTTCEETTTTEECEEEEEECTTSBEEE
T ss_pred -chhhHHHHhhhhHHhcCccccccccccCc--ccHHHHHcCCcccCCCeeEEEEEEECCCCeEEE
Confidence 3456677754 234445556788887776 4579999998 2444 7999999999965
No 102
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.26 E-value=1.3e-11 Score=109.88 Aligned_cols=82 Identities=10% Similarity=0.067 Sum_probs=67.4
Q ss_pred cCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHH
Q 008311 332 DGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETL 409 (570)
Q Consensus 332 ~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~ 409 (570)
.+.+|..+.++.++||+|+|+|||+||++|+.+. |.+++++++ .++.++.|.+ |+.
T Consensus 37 ~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--------~~~------- 94 (141)
T 3hxs_A 37 ADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYA-------GKIYIYKVNV--------DKE------- 94 (141)
T ss_dssp CCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTT-------TTCEEEEEET--------TTC-------
T ss_pred hccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CceEEEEEEC--------CCC-------
Confidence 4556778899999999999999999999999999 999998885 2577888774 211
Q ss_pred HcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEc
Q 008311 410 QSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVS 455 (570)
Q Consensus 410 ~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~ 455 (570)
..+.+.|++.++|+++++|++|+++.
T Consensus 95 --------------------~~~~~~~~v~~~Pt~~~~~~~g~~~~ 120 (141)
T 3hxs_A 95 --------------------PELARDFGIQSIPTIWFVPMKGEPQV 120 (141)
T ss_dssp --------------------HHHHHHTTCCSSSEEEEECSSSCCEE
T ss_pred --------------------HHHHHHcCCCCcCEEEEEeCCCCEEE
Confidence 12567799999999999999999863
No 103
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.26 E-value=2e-11 Score=107.65 Aligned_cols=86 Identities=8% Similarity=0.137 Sum_probs=68.5
Q ss_pred CCcccCCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHH
Q 008311 328 QPLVDGSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKK 405 (570)
Q Consensus 328 ~pl~~g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~ 405 (570)
.|.+...+++.++....+||+|+|+|||+||+||+.+. |.++++++++ ++.++.|++ |+.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-------~v~~~~vd~--------d~~--- 85 (128)
T 3ul3_B 24 VPRLQQNGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK-------RIYLLKVDL--------DKN--- 85 (128)
T ss_dssp --CCCCCCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-------GEEEEEEEG--------GGC---
T ss_pred CCccccCCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-------CeEEEEEEC--------CCC---
Confidence 55666777777788788999999999999999999999 9999998852 577888874 211
Q ss_pred HHHHHcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 406 FETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 406 F~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+.++|+++++|+++++ ++|+++.+
T Consensus 86 ------------------------~~l~~~~~v~~~Pt~~~~-~~G~~~~~ 111 (128)
T 3ul3_B 86 ------------------------ESLARKFSVKSLPTIILL-KNKTMLAR 111 (128)
T ss_dssp ------------------------HHHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred ------------------------HHHHHHcCCCCcCEEEEE-ECCEEEEE
Confidence 136678999999999999 78998764
No 104
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.26 E-value=1e-11 Score=128.63 Aligned_cols=106 Identities=15% Similarity=0.085 Sum_probs=80.7
Q ss_pred CCcccCCCCCeeeccccCCCEEEEEEe-cCCCHHhHHHHHHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHH
Q 008311 328 QPLVDGSTKRRVNIEVLRRKNVLLLIS-DLDISQEELSILEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKF 406 (570)
Q Consensus 328 ~pl~~g~~G~~Vsls~LkGKvVlL~Fw-AsWCpPCr~e~L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F 406 (570)
...+.+.+|+++++++|+||+|+|+|| +.|||.|..++ ..+.+ . ..++++||+||. | +....+.|
T Consensus 6 ~F~l~~~~G~~~~Lsd~~Gk~vvl~F~p~~~tp~C~~e~-~~~~~-~------~~~~~~v~gis~-D-----~~~~~~~f 71 (322)
T 4eo3_A 6 HFELLTDEGKTFTHVDLYGKYTILFFFPKAGTSGSTREA-VEFSR-E------NFEKAQVVGISR-D-----SVEALKRF 71 (322)
T ss_dssp CCEEEETTSCEEEGGGTTTSEEEEEECSSTTSHHHHHHH-HHHHH-S------CCTTEEEEEEES-C-----CHHHHHHH
T ss_pred CcEEECCCcCEEeHHHhCCCeEEEEEECCCCCCCCHHHH-HHHHH-H------hhCCCEEEEEeC-C-----CHHHHHHH
Confidence 455678899999999999999999999 57899999987 22222 1 135799999996 3 34455677
Q ss_pred HHHHcCCCceeeccccccChHHHHHHHHhCCC----CCCceEEEECCCCcEEc
Q 008311 407 ETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHF----KNKPILVVLDPQGRVVS 455 (570)
Q Consensus 407 ~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V----~~IPtlVVLDpqGkVv~ 455 (570)
.+- +.++||.+.|.. ..+.+.||+ ..+|+++|||++|+|+.
T Consensus 72 ~~~------~~l~fp~l~D~~--~~v~~~ygv~~~~~~~r~tfiId~~G~i~~ 116 (322)
T 4eo3_A 72 KEK------NDLKVTLLSDPE--GILHEFFNVLENGKTVRSTFLIDRWGFVRK 116 (322)
T ss_dssp HHH------HTCCSEEEECTT--CHHHHHTTCEETTEECCEEEEECTTSBEEE
T ss_pred HHh------hCCceEEEEcCc--hHHHHhcCCCCCCcCccEEEEECCCCEEEE
Confidence 653 235677777863 578999999 35899999999999973
No 105
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.26 E-value=5.9e-12 Score=124.59 Aligned_cols=107 Identities=11% Similarity=0.103 Sum_probs=78.9
Q ss_pred CcccCCCCCeeeccccCCCEEEEEEecCC-CHHhH-----HHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCCh
Q 008311 329 PLVDGSTKRRVNIEVLRRKNVLLLISDLD-ISQEE-----LSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDD 400 (570)
Q Consensus 329 pl~~g~~G~~Vsls~LkGKvVlL~FwAsW-CpPCr-----~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D 400 (570)
..+.+.+|+.+++++++||+|+|+||++| ||+|. .++ |.+. ++ +++||+||. | +.
T Consensus 31 FtL~d~~G~~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~~--------gv~VvgIS~-D-----s~ 93 (224)
T 3keb_A 31 FMLVDDQKHDAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---WP--------HLKLIVITV-D-----SP 93 (224)
T ss_dssp CEEEETTSCEEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---CT--------TSEEEEEES-S-----CH
T ss_pred eEEECCCCCEEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---cC--------CCEEEEEEC-C-----CH
Confidence 34557789999999999999999999999 99999 776 5544 22 589999996 3 34
Q ss_pred hhHHHHHHHHcCCCceeeccccccChHHHHHHHHhCCCCC---------CceEEEECCCCcEEcccc
Q 008311 401 PTQKKFETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKN---------KPILVVLDPQGRVVSPNA 458 (570)
Q Consensus 401 ~~~~~F~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~---------IPtlVVLDpqGkVv~~na 458 (570)
...++|.+-. ..+ +||.+.|.. ...+.+.||+.. .|+++|||++|+|+....
T Consensus 94 ~~~~~f~~~~-gl~----~fplLsD~~-~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~ 154 (224)
T 3keb_A 94 SSLARARHEH-GLP----NIALLSTLR-GRDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYSER 154 (224)
T ss_dssp HHHHHHHHHH-CCT----TCEEEESTT-CTTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEE
T ss_pred HHHHHHHHHc-CCC----CceEEEcCC-chHHHHHhCCccccccccCCccCEEEEEcCCCEEEEEEe
Confidence 4456665422 221 355566741 246888899864 799999999999997643
No 106
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.25 E-value=6.6e-12 Score=118.40 Aligned_cols=77 Identities=13% Similarity=0.207 Sum_probs=57.2
Q ss_pred eccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCcee
Q 008311 340 NIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYT 417 (570)
Q Consensus 340 sls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~a 417 (570)
.+++++||+|+|+|||+|||||+.++ |.++++++. +++|+.|++ |+..+..+
T Consensus 48 ~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--------~v~~~~v~~--------d~~~~~~~---------- 101 (167)
T 1z6n_A 48 RLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP--------NIELAIISK--------GRAEDDLR---------- 101 (167)
T ss_dssp HHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT--------TEEEEEECH--------HHHHHHTT----------
T ss_pred HHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--------CcEEEEEEC--------CCCHHHHH----------
Confidence 45678999999999999999999999 999987652 588888874 32211100
Q ss_pred eccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 418 VYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 418 V~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
.| . ..+++++|+++++|++|+++.+
T Consensus 102 -~~----~---------~~~v~~iPt~i~~~~~G~~~~~ 126 (167)
T 1z6n_A 102 -QR----L---------ALERIAIPLVLVLDEEFNLLGR 126 (167)
T ss_dssp -TT----T---------TCSSCCSSEEEEECTTCCEEEE
T ss_pred -HH----H---------HcCCCCcCeEEEECCCCCEEEE
Confidence 01 0 1258999999999999998753
No 107
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.25 E-value=3.7e-12 Score=116.78 Aligned_cols=91 Identities=12% Similarity=0.099 Sum_probs=66.5
Q ss_pred CCCeeeccccCCCEEEEEEe-cCCCHHhHHHH--H---HHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHH
Q 008311 335 TKRRVNIEVLRRKNVLLLIS-DLDISQEELSI--L---EQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFET 408 (570)
Q Consensus 335 ~G~~Vsls~LkGKvVlL~Fw-AsWCpPCr~e~--L---~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~ 408 (570)
.|+.+.++..+||+|+|+|| |+||+||+.++ | .++.+.++ .++.++.|.+ + +..
T Consensus 36 ~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~-------~~~~~v~vd~-~------~~~------ 95 (154)
T 2ju5_A 36 YAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAG-------VHLHMVEVDF-P------QKN------ 95 (154)
T ss_dssp HHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHH-------HHCEEEEEEC-C------SSC------
T ss_pred HHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhc-------CcEEEEEecC-c------ccc------
Confidence 45566777788999999999 99999999998 6 56654442 2577777775 1 111
Q ss_pred HHcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 409 LQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 409 ~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
.++ ++. .| ....+.+.|++.++|+++++|++|+++.+
T Consensus 96 ---~~~-----~~~-~~--~~~~l~~~~~v~~~Pt~~~~d~~G~~~~~ 132 (154)
T 2ju5_A 96 ---HQP-----EEQ-RQ--KNQELKAQYKVTGFPELVFIDAEGKQLAR 132 (154)
T ss_dssp ---CCC-----HHH-HH--HHHHHHHHTTCCSSSEEEEECTTCCEEEE
T ss_pred ---CCC-----hhh-Hh--hHHHHHHHcCCCCCCEEEEEcCCCCEEEE
Confidence 122 221 12 24578899999999999999999999875
No 108
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.23 E-value=1.3e-12 Score=120.74 Aligned_cols=102 Identities=11% Similarity=0.114 Sum_probs=62.6
Q ss_pred eeccccCCCEEEEEEecCCCHHhHHHH--H---HHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCC
Q 008311 339 VNIEVLRRKNVLLLISDLDISQEELSI--L---EQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSM 413 (570)
Q Consensus 339 Vsls~LkGKvVlL~FwAsWCpPCr~e~--L---~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~M 413 (570)
+..+..+||+|+|+|||+||+||+.+. + .++.+.+++ ++.++.|++.+. ++....+ .+....
T Consensus 40 ~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-------~~~~v~v~~d~~-----~~~~~~~-~~~~~~ 106 (172)
T 3f9u_A 40 MEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-------DYVLITLYVDNK-----TPLTEPV-KIMENG 106 (172)
T ss_dssp HHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-------HCEEEEEETTCC-----CEEEEEE-EEEETT
T ss_pred HHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-------CEEEEEEecCcc-----cccchhh-hhhhcc
Confidence 334446799999999999999999853 2 566666542 588999986211 1000000 001112
Q ss_pred CceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 414 PWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 414 PW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
.+..+.. +.+ .......+.|++.++|+++++|++|+++.+
T Consensus 107 ~~~~~~~--~~~-~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~ 146 (172)
T 3f9u_A 107 TERTLRT--VGD-KWSYLQRVKFGANAQPFYVLIDNEGNPLNK 146 (172)
T ss_dssp EEEEEEE--HHH-HHHHHHHHHHSCCCSSEEEEECTTSCBSSC
T ss_pred hhhhhhh--hhh-hhhHHHHHHcCCCCcceEEEECCCCCEEee
Confidence 2222221 112 112233688999999999999999999875
No 109
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.21 E-value=4.4e-11 Score=104.53 Aligned_cols=77 Identities=10% Similarity=0.090 Sum_probs=62.0
Q ss_pred eccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCcee
Q 008311 340 NIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYT 417 (570)
Q Consensus 340 sls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~a 417 (570)
.....+||+|+|+|||+||++|+.+. |.+++++++ .++.++.|++ +
T Consensus 20 ~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-------~~v~~~~v~~--------~----------------- 67 (126)
T 2l57_A 20 LEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKERE-------GKFNIYYARL--------E----------------- 67 (126)
T ss_dssp TTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSS-------SSCEEEEEET--------T-----------------
T ss_pred HHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhc-------CCeEEEEEeC--------C-----------------
Confidence 34556899999999999999999998 888888874 3688999883 1
Q ss_pred eccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 418 VYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 418 V~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
.|. ...+.+.|++.++|+++++|++|+++.+
T Consensus 68 ------~d~--~~~~~~~~~v~~~Pt~~~~~~~G~~~~~ 98 (126)
T 2l57_A 68 ------EEK--NIDLAYKYDANIVPTTVFLDKEGNKFYV 98 (126)
T ss_dssp ------SSH--HHHHHHHTTCCSSSEEEEECTTCCEEEE
T ss_pred ------CCc--hHHHHHHcCCcceeEEEEECCCCCEEEE
Confidence 011 2346778999999999999999999763
No 110
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.20 E-value=9.8e-12 Score=110.83 Aligned_cols=83 Identities=10% Similarity=-0.040 Sum_probs=63.6
Q ss_pred CCCCCeeeccccCCCEEEEEEecCCCHHhHHHH--H---HHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHH
Q 008311 333 GSTKRRVNIEVLRRKNVLLLISDLDISQEELSI--L---EQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFE 407 (570)
Q Consensus 333 g~~G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L---~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~ 407 (570)
+.++....+++.+||+|+|+|||+||++|+.+. + .+++++++ ++.++.|++ + +..
T Consensus 18 ~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~--------~~~~~~vd~-~------~~~----- 77 (134)
T 2fwh_A 18 TVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA--------DTVLLQANV-T------AND----- 77 (134)
T ss_dssp SHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT--------TSEEEEEEC-T------TCC-----
T ss_pred CHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc--------CcEEEEEeC-C------CCc-----
Confidence 334445667778899999999999999999977 5 77777663 488888875 1 100
Q ss_pred HHHcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEE
Q 008311 408 TLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVV 454 (570)
Q Consensus 408 ~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv 454 (570)
| ....+.+.|++.++|+++++|++|+++
T Consensus 78 -----------------~--~~~~l~~~~~v~~~Pt~~~~d~~G~~v 105 (134)
T 2fwh_A 78 -----------------A--QDVALLKHLNVLGLPTILFFDGQGQEH 105 (134)
T ss_dssp -----------------H--HHHHHHHHTTCCSSSEEEEECTTSCBC
T ss_pred -----------------c--hHHHHHHHcCCCCCCEEEEECCCCCEe
Confidence 1 124577889999999999999999997
No 111
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.13 E-value=6.7e-11 Score=104.32 Aligned_cols=75 Identities=21% Similarity=0.209 Sum_probs=60.4
Q ss_pred cCCCEEEEEEecCCCHHhHHHH--HH--HHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeec
Q 008311 344 LRRKNVLLLISDLDISQEELSI--LE--QIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVY 419 (570)
Q Consensus 344 LkGKvVlL~FwAsWCpPCr~e~--L~--~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~ 419 (570)
.+||+|+|+|||+||+||+.+. |. ++.++++. ++.++.|++ .+
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~-------~~~~~~vd~-------~~------------------- 73 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK-------HFEVVKIDV-------GN------------------- 73 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH-------HCEEEEEEC-------TT-------------------
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC-------CEEEEEEeC-------Cc-------------------
Confidence 4699999999999999999998 88 88888752 588888875 11
Q ss_pred cccccChHHHHHHHHhCCC---CCCceEEEECCCCcEEccc
Q 008311 420 HPTLIDRAVIRYVKDVWHF---KNKPILVVLDPQGRVVSPN 457 (570)
Q Consensus 420 fP~l~D~~~~~~L~~~y~V---~~IPtlVVLDpqGkVv~~n 457 (570)
. |. ...+.+.|++ .++|+++++|++|+++.+.
T Consensus 74 ~----~~--~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~~~~ 108 (133)
T 3fk8_A 74 F----DR--NLELSQAYGDPIQDGIPAVVVVNSDGKVRYTT 108 (133)
T ss_dssp T----TS--SHHHHHHTTCGGGGCSSEEEEECTTSCEEEEC
T ss_pred c----cc--hHHHHHHhCCccCCccceEEEECCCCCEEEEe
Confidence 0 11 2347788999 9999999999999998763
No 112
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.06 E-value=2.1e-09 Score=103.44 Aligned_cols=171 Identities=9% Similarity=0.040 Sum_probs=104.3
Q ss_pred cCCCEEEEEE----ecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCcee
Q 008311 344 LRRKNVLLLI----SDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYT 417 (570)
Q Consensus 344 LkGKvVlL~F----wAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~a 417 (570)
+++.+++++| ||.||++|+.++ +.++++++.. .+++.++.|.. ++
T Consensus 19 ~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~-----~~~v~~~~vd~--------~~---------------- 69 (229)
T 2ywm_A 19 FKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVG-----QDKIKLDIYSP--------FT---------------- 69 (229)
T ss_dssp CCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHC-----TTTEEEEEECT--------TT----------------
T ss_pred ccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCC-----CCceEEEEecC--------cc----------------
Confidence 3455677777 699999999999 8999888852 23577666642 11
Q ss_pred eccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEccccchhHhhhcCCCCCCCchhHHHHhhhcCccccccccCCCc
Q 008311 418 VYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSPNALHMMWIWGSNAFPFTSLREEALWKEETWRLELLVDGIDP 497 (570)
Q Consensus 418 V~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~na~~~I~~~G~~aFPFt~~~~e~L~~e~~w~~~ll~d~~d~ 497 (570)
...+.++|+|+++|++++++..+.++...|... .+. +.. -...+..... -...++.
T Consensus 70 -----------~~~l~~~~~v~~~Ptl~~~~~~~~~~~~~G~~~-----~~~--l~~-~~~~~~~~~~-----~~~~l~~ 125 (229)
T 2ywm_A 70 -----------HKEETEKYGVDRVPTIVIEGDKDYGIRYIGLPA-----GLE--FTT-LINGIFHVSQ-----RKPQLSE 125 (229)
T ss_dssp -----------CHHHHHHTTCCBSSEEEEESSSCCCEEEESCCC-----TTH--HHH-HHHHHHHHHT-----TCCSCCH
T ss_pred -----------cHHHHHHcCCCcCcEEEEECCCcccceecCCcc-----HHH--HHH-HHHHHHhccC-----CccCCCH
Confidence 123677899999999999963222222222110 000 000 0111111000 0001111
Q ss_pred ccccc--ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhccccccccccccCCC
Q 008311 498 LVLDW--IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVTSGK 569 (570)
Q Consensus 498 ~i~~~--~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~~~~ 569 (570)
...+. ...++.+.++|.+. |++|+.+.+.+.+++++. .++.++.|..+...+ +.+.+++.+.|+++++|+
T Consensus 126 ~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~-~~v~~~~vd~~~~~~-l~~~~~v~~~Pt~~~~G~ 198 (229)
T 2ywm_A 126 KTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAN-DYITSKVIDASENQD-LAEQFQVVGVPKIVINKG 198 (229)
T ss_dssp HHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHC-TTEEEEEEEGGGCHH-HHHHTTCCSSSEEEEGGG
T ss_pred HHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHC-CCeEEEEEECCCCHH-HHHHcCCcccCEEEECCE
Confidence 11111 13456667777677 999999999999998875 478888888776544 555678999999998775
No 113
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.03 E-value=4.7e-10 Score=97.32 Aligned_cols=69 Identities=10% Similarity=0.112 Sum_probs=51.6
Q ss_pred cCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeeccc
Q 008311 344 LRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHP 421 (570)
Q Consensus 344 LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP 421 (570)
.++|+|+|+|||+||+||+... +.++.+++. ++.++-|.+ |+.
T Consensus 18 ~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~--------~~~~~~vd~--------d~~------------------- 62 (105)
T 3zzx_A 18 AGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS--------DVVFLKVDV--------DEC------------------- 62 (105)
T ss_dssp TTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TEEEEEEET--------TTC-------------------
T ss_pred cCCCEEEEEEECCCCCCccCCCcchhhhhhccC--------CeEEEEEec--------ccC-------------------
Confidence 3579999999999999999887 777766552 455555543 210
Q ss_pred cccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 422 TLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 422 ~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+.+.|+|+++||++++ ++|+++.+
T Consensus 63 --------~~l~~~~~V~~~PT~~~~-~~G~~v~~ 88 (105)
T 3zzx_A 63 --------EDIAQDNQIACMPTFLFM-KNGQKLDS 88 (105)
T ss_dssp --------HHHHHHTTCCBSSEEEEE-ETTEEEEE
T ss_pred --------HHHHHHcCCCeecEEEEE-ECCEEEEE
Confidence 136778999999998887 78998764
No 114
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.01 E-value=8.1e-10 Score=98.41 Aligned_cols=68 Identities=7% Similarity=0.123 Sum_probs=55.8
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
.||+|+|+|||+||++|+.+. |.+++++++ +++.++.|.+ |+.
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~-------~~v~~~~vd~--------~~~-------------------- 81 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYD-------GQIVIYKVDT--------EKE-------------------- 81 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--------TTC--------------------
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhc-------CCEEEEEEeC--------CCC--------------------
Confidence 469999999999999999998 889888874 2578888774 211
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEE
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVV 454 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv 454 (570)
..+.+.|++.++|+++++|++|+++
T Consensus 82 -------~~l~~~~~v~~~Pt~~~~~~~G~~~ 106 (136)
T 2l5l_A 82 -------QELAGAFGIRSIPSILFIPMEGKPE 106 (136)
T ss_dssp -------HHHHHHTTCCSSCEEEEECSSSCCE
T ss_pred -------HHHHHHcCCCCCCEEEEECCCCcEE
Confidence 1356679999999999999999986
No 115
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.00 E-value=6.6e-09 Score=99.39 Aligned_cols=170 Identities=9% Similarity=0.003 Sum_probs=100.1
Q ss_pred ccCCCEEEEEEecC-CCHHhHHHHHHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeeccc
Q 008311 343 VLRRKNVLLLISDL-DISQEELSILEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHP 421 (570)
Q Consensus 343 ~LkGKvVlL~FwAs-WCpPCr~e~L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP 421 (570)
..++++++++|||. ||++|+... ..++++.+ ..+++.++.|.+ +..
T Consensus 19 ~~~~~v~lv~f~~~~~C~~C~~~~--~~~~~la~----~~~~v~~~~vd~--------~~~------------------- 65 (226)
T 1a8l_A 19 KMVNPVKLIVFVRKDHCQYCDQLK--QLVQELSE----LTDKLSYEIVDF--------DTP------------------- 65 (226)
T ss_dssp GCCSCEEEEEEECSSSCTTHHHHH--HHHHHHHT----TCTTEEEEEEET--------TSH-------------------
T ss_pred hcCCCeEEEEEecCCCCchhHHHH--HHHHHHHh----hCCceEEEEEeC--------CCc-------------------
Confidence 35678899999999 999998765 33333332 123577777764 110
Q ss_pred cccChHHHHHHHHhCCCCCCceEEEECCCCcEE--ccccchhHhhhcCCCCCCCchhHHHHhhhcCccccccccCCCccc
Q 008311 422 TLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVV--SPNALHMMWIWGSNAFPFTSLREEALWKEETWRLELLVDGIDPLV 499 (570)
Q Consensus 422 ~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv--~~na~~~I~~~G~~aFPFt~~~~e~L~~e~~w~~~ll~d~~d~~i 499 (570)
....+.+.|+|+++|+++++ ++|+.+ ... |. |-. .....+..... ....-...++...
T Consensus 66 ------~~~~~~~~~~v~~~Pt~~~~-~~g~~~~~~~~--------G~---~~~-~~l~~~l~~~l-~~~~~~~~l~~~~ 125 (226)
T 1a8l_A 66 ------EGKELAKRYRIDRAPATTIT-QDGKDFGVRYF--------GL---PAG-HEFAAFLEDIV-DVSREETNLMDET 125 (226)
T ss_dssp ------HHHHHHHHTTCCSSSEEEEE-ETTBCCSEEEE--------SC---CCT-THHHHHHHHHH-HHHHTCCCCCHHH
T ss_pred ------ccHHHHHHcCCCcCceEEEE-cCCceeeEEEe--------cc---CcH-HHHHHHHHHHH-hhcCCCCCCCHHH
Confidence 01236677999999999998 445421 111 11 110 11111111000 0000000112211
Q ss_pred cccc--cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCC----CCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 500 LDWI--KEGKYIFLYGGDD-VEWVRKFTTAARSVANTAR----IPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 500 ~~~~--~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~----~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
.+.+ ..++.+.++|.+. |++|+.+.|.+.+++++.+ .++.++.|..|...+ +.+-+++.++|++++
T Consensus 126 ~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~~-l~~~~~v~~~Pt~~~ 198 (226)
T 1a8l_A 126 KQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPE-WADQYNVMAVPKIVI 198 (226)
T ss_dssp HHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHH-HHHHTTCCSSCEEEE
T ss_pred HHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCHH-HHHhCCCcccCeEEE
Confidence 1111 3456658888888 9999999999999987633 578889998876544 555678889999876
No 116
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=98.99 E-value=7.4e-10 Score=105.79 Aligned_cols=119 Identities=8% Similarity=0.031 Sum_probs=83.8
Q ss_pred Ceeecccc-CCC-EEEEEEecCCCHHhHH-HH--HHHHHHHHhhhhhccCCCe-EEEEEecccCCCCCChhhHHHHHHHH
Q 008311 337 RRVNIEVL-RRK-NVLLLISDLDISQEEL-SI--LEQIYNESRLHLTRQESHY-EVVWIPIVDHFIHWDDPTQKKFETLQ 410 (570)
Q Consensus 337 ~~Vsls~L-kGK-vVlL~FwAsWCpPCr~-e~--L~~iY~elk~~~~k~~~~f-EIV~IsIvD~s~~w~D~~~~~F~~~~ 410 (570)
++++++++ +|| +|+++||+.|||+|.. ++ +.+.|+++++ .++ +|+.||. | +....++|.+-
T Consensus 37 ~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~------~g~d~VigIS~-D-----~~~~~~~f~~~- 103 (176)
T 4f82_A 37 NACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRA------AGIDEIWCVSV-N-----DAFVMGAWGRD- 103 (176)
T ss_dssp EEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHH------TTCCEEEEEES-S-----CHHHHHHHHHH-
T ss_pred eEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHh------CCCCEEEEEeC-C-----CHHHHHHHHHH-
Confidence 78999997 998 5677999999999999 99 9999999974 368 9999996 3 23455666542
Q ss_pred cCCCceeeccccccChHHHHHHHHhCCCC------C-----CceEEEECCCCcEEccccchhHhhhcCCCCCCCchhHHH
Q 008311 411 SSMPWYTVYHPTLIDRAVIRYVKDVWHFK------N-----KPILVVLDPQGRVVSPNALHMMWIWGSNAFPFTSLREEA 479 (570)
Q Consensus 411 ~~MPW~aV~fP~l~D~~~~~~L~~~y~V~------~-----IPtlVVLDpqGkVv~~na~~~I~~~G~~aFPFt~~~~e~ 479 (570)
...+ . .||.+.|. ...+.+.||+. | .|.++|| ++|+|+.... +..+ +++.+..++
T Consensus 104 ~~l~--~-~f~lLsD~--~~~va~ayGv~~~~~~~G~g~~s~R~tfII-~dG~I~~~~~-------~~~~-~~~~~~a~~ 169 (176)
T 4f82_A 104 LHTA--G-KVRMMADG--SAAFTHALGLTQDLSARGMGIRSLRYAMVI-DGGVVKTLAV-------EAPG-KFEVSDAAS 169 (176)
T ss_dssp TTCT--T-TSEEEECT--TCHHHHHHTCEEECGGGTCCEEECCEEEEE-ETTEEEEEEE-------CCTT-CCSSSSHHH
T ss_pred hCCC--C-CceEEEcC--chHHHHHhCCCccccccCCCcccccEEEEE-cCCEEEEEEE-------cCCC-CcchhhHHH
Confidence 2222 0 26666675 34678888873 2 5889999 9999986532 1111 455555666
Q ss_pred Hhh
Q 008311 480 LWK 482 (570)
Q Consensus 480 L~~ 482 (570)
+++
T Consensus 170 vL~ 172 (176)
T 4f82_A 170 VLA 172 (176)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 117
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=98.99 E-value=3.9e-10 Score=98.60 Aligned_cols=79 Identities=9% Similarity=0.065 Sum_probs=56.9
Q ss_pred eeeccccCCCEEEEEEecCCCHHhHHHH--H---HHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcC
Q 008311 338 RVNIEVLRRKNVLLLISDLDISQEELSI--L---EQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSS 412 (570)
Q Consensus 338 ~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L---~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~ 412 (570)
.+.++..+||+|+|+|||+||++|+.+. + .++.+.++ .++.++.|.+ +.
T Consensus 19 ~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~-------~~~~~~~vd~--------~~----------- 72 (130)
T 2kuc_A 19 ALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFN-------RHFVNLKMDM--------EK----------- 72 (130)
T ss_dssp HHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHH-------HHSEEEEECS--------SS-----------
T ss_pred HHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHh-------cCeEEEEEec--------CC-----------
Confidence 3455556899999999999999999987 5 44544443 1355555543 11
Q ss_pred CCceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 413 MPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 413 MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
+ ....+.+.|++.++|+++++|++|+++.+
T Consensus 73 ------------~--~~~~~~~~~~v~~~Pt~~~~d~~G~~~~~ 102 (130)
T 2kuc_A 73 ------------G--EGVELRKKYGVHAYPTLLFINSSGEVVYR 102 (130)
T ss_dssp ------------T--THHHHHHHTTCCSSCEEEEECTTSCEEEE
T ss_pred ------------c--chHHHHHHcCCCCCCEEEEECCCCcEEEE
Confidence 0 02346778999999999999999999864
No 118
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.99 E-value=2.5e-09 Score=121.27 Aligned_cols=167 Identities=8% Similarity=-0.008 Sum_probs=105.9
Q ss_pred ccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceee
Q 008311 341 IEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTV 418 (570)
Q Consensus 341 ls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV 418 (570)
++.++||+|+|+|||+||+||+.++ |.+++++++ +++.++.|+. ++.
T Consensus 450 ~~~~~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~-------~~v~~~~vd~--------~~~---------------- 498 (780)
T 3apo_A 450 FPASDKEPWLVDFFAPWSPPSRALLPELRKASTLLY-------GQLKVGTLDC--------TIH---------------- 498 (780)
T ss_dssp SCTTCCSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--------TTC----------------
T ss_pred HHHcCCCeEEEEEECCCCHHHHHHhHHHHHHHHHhc-------CCeEEEEEeC--------CCC----------------
Confidence 3445899999999999999999998 999999885 2577787764 111
Q ss_pred ccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEccccchhHhhhcCCCCCCCchhHHHHhhhcCccccccccCCCcc
Q 008311 419 YHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSPNALHMMWIWGSNAFPFTSLREEALWKEETWRLELLVDGIDPL 498 (570)
Q Consensus 419 ~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~na~~~I~~~G~~aFPFt~~~~e~L~~e~~w~~~ll~d~~d~~ 498 (570)
..+.+.|+++++|++++++ +|++.... | +.+.....+..++..- .-+. .++..
T Consensus 499 -----------~~~~~~~~v~~~Pt~~~~~-~g~~~~~~--------g----~~~~~~l~~fi~~~~~--~~v~-~l~~~ 551 (780)
T 3apo_A 499 -----------EGLCNMYNIQAYPTTVVFN-QSSIHEYE--------G----HHSAEQILEFIEDLRN--PSVV-SLTPS 551 (780)
T ss_dssp -----------HHHHHHTTCCSSSEEEEEE-TTEEEEEC--------S----CSCHHHHHHHHHHHHS--CSEE-ECCHH
T ss_pred -----------HHHHHHcCCCcCCeEEEEc-CCceeeec--------C----cccHHHHHHHHHhhcc--ccee-ecCcc
Confidence 0156679999999999994 57653221 2 1222232222221100 0000 01111
Q ss_pred -cccccc---CCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 499 -VLDWIK---EGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 499 -i~~~~~---egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
..+-+. .++.+.++|.+. |++|+++.+.+.+++++.+..+-++.|..+..+ .+.+.+++-+.|++++
T Consensus 552 ~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~~v~~~~vd~~~~~-~l~~~~~v~~~Pti~~ 623 (780)
T 3apo_A 552 TFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGLINVGSVDCGQYH-SFCTQENVQRYPEIRF 623 (780)
T ss_dssp HHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTTH-HHHHHTTCCSSSEEEE
T ss_pred cHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCCeEEEEEECcchH-HHHHHcCCCCCCeEEE
Confidence 111112 256667777777 999999999999999875556666777666433 3455567777888765
No 119
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=98.98 E-value=6.8e-10 Score=96.42 Aligned_cols=69 Identities=13% Similarity=0.131 Sum_probs=54.7
Q ss_pred cCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeeccc
Q 008311 344 LRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHP 421 (570)
Q Consensus 344 LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP 421 (570)
.+||+|+|+|||+||+||+.+. |.+++++++ ++.++.|.+ |+.
T Consensus 29 ~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--------~v~~~~vd~--------d~~------------------- 73 (116)
T 3qfa_C 29 AGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYS--------NVIFLEVDV--------DDC------------------- 73 (116)
T ss_dssp HTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCT--------TSEEEEEET--------TTT-------------------
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--------CCEEEEEEC--------CCC-------------------
Confidence 3789999999999999999998 888877663 377777764 211
Q ss_pred cccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 422 TLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 422 ~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+.+.|+++++|+++++ ++|+++.+
T Consensus 74 --------~~l~~~~~v~~~Pt~~~~-~~G~~~~~ 99 (116)
T 3qfa_C 74 --------QDVASECEVKSMPTFQFF-KKGQKVGE 99 (116)
T ss_dssp --------HHHHHHTTCCSSSEEEEE-SSSSEEEE
T ss_pred --------HHHHHHcCCccccEEEEE-eCCeEEEE
Confidence 136678999999999998 88988754
No 120
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=98.97 E-value=1.1e-09 Score=93.86 Aligned_cols=68 Identities=13% Similarity=0.132 Sum_probs=54.7
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
+||+|+|+|||+||++|+.+. |.+++++++ ++.++.|.+ |+
T Consensus 23 ~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~--------~~~~~~vd~--------~~--------------------- 65 (109)
T 3f3q_A 23 QDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP--------QADFYKLDV--------DE--------------------- 65 (109)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--------TT---------------------
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--------CCEEEEEEC--------CC---------------------
Confidence 589999999999999999998 888888773 377777764 21
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
+ ..+.+.|+++++|++++++ +|+++.+
T Consensus 66 --~----~~l~~~~~v~~~Pt~~~~~-~G~~~~~ 92 (109)
T 3f3q_A 66 --L----GDVAQKNEVSAMPTLLLFK-NGKEVAK 92 (109)
T ss_dssp --C----HHHHHHTTCCSSSEEEEEE-TTEEEEE
T ss_pred --C----HHHHHHcCCCccCEEEEEE-CCEEEEE
Confidence 0 1356779999999999998 9988764
No 121
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=98.97 E-value=9.4e-10 Score=93.75 Aligned_cols=70 Identities=11% Similarity=0.062 Sum_probs=54.2
Q ss_pred cCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeeccc
Q 008311 344 LRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHP 421 (570)
Q Consensus 344 LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP 421 (570)
.+||+|+|+|||+||++|+.+. |.+++++++ ++.++.|.+ .+.
T Consensus 22 ~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~--------~v~~~~vd~-------~~~-------------------- 66 (111)
T 2pu9_C 22 AGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL--------DVIFLKLDC-------NQE-------------------- 66 (111)
T ss_dssp CTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEEC-------SST--------------------
T ss_pred cCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC--------CeEEEEEec-------Ccc--------------------
Confidence 4689999999999999999998 888887763 477777764 111
Q ss_pred cccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 422 TLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 422 ~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
+ ..+.+.|+++++|+ ++++++|+++.+
T Consensus 67 ---~----~~~~~~~~v~~~Pt-~~~~~~G~~~~~ 93 (111)
T 2pu9_C 67 ---N----KTLAKELGIRVVPT-FKILKENSVVGE 93 (111)
T ss_dssp ---T----HHHHHHHCCSBSSE-EEEESSSSEEEE
T ss_pred ---h----HHHHHHcCCCeeeE-EEEEeCCcEEEE
Confidence 1 23667799999999 666799998753
No 122
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=98.95 E-value=8.7e-10 Score=100.90 Aligned_cols=67 Identities=12% Similarity=0.059 Sum_probs=53.9
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
+||+|+|+|||+||+||+.+. |.+++++++ +.+.++.|++ |+.
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~-------~~~~~~~vd~--------d~~-------------------- 66 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLS-------KMAAIYLVDV--------DQT-------------------- 66 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTT-------TTEEEEEEET--------TTC--------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcc-------CceEEEEEEC--------CcC--------------------
Confidence 489999999999999999999 998888774 2477777764 110
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEE
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVV 454 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv 454 (570)
..+.+.|+|.++|+++ ++++|+++
T Consensus 67 -------~~l~~~~~v~~~Pt~~-~~~~G~~v 90 (149)
T 3gix_A 67 -------AVYTQYFDISYIPSTV-FFFNGQHM 90 (149)
T ss_dssp -------CHHHHHTTCCSSSEEE-EEETTEEE
T ss_pred -------HHHHHHcCCCccCeEE-EEECCeEE
Confidence 1256779999999999 77899988
No 123
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=98.93 E-value=2e-09 Score=93.03 Aligned_cols=73 Identities=10% Similarity=0.194 Sum_probs=54.2
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
.||+|+|+|||+|||||+.+. |.+++++++ ..|+++.+ + ...+.
T Consensus 28 ~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~---------~~v~~~~~-~-----~~~~~------------------- 73 (118)
T 1zma_A 28 KKETATFFIGRKTCPYCRKFAGTLSGVVAETK---------AHIYFINS-E-----EPSQL------------------- 73 (118)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHC---------CCCEEEET-T-----CGGGH-------------------
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHhcC---------CeEEEEEC-C-----CcCcH-------------------
Confidence 578999999999999999999 888888763 34677775 1 11110
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
+....+.+.|+++++|+++++ ++|+++.+
T Consensus 74 ----~~~~~~~~~~~i~~~Pt~~~~-~~G~~~~~ 102 (118)
T 1zma_A 74 ----NDLQAFRSRYGIPTVPGFVHI-TDGQINVR 102 (118)
T ss_dssp ----HHHHHHHHHHTCCSSCEEEEE-ETTEEEEE
T ss_pred ----HHHHHHHHHcCCCCCCeEEEE-ECCEEEEE
Confidence 112346778999999999999 48988743
No 124
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=98.93 E-value=1.2e-09 Score=92.43 Aligned_cols=68 Identities=13% Similarity=0.217 Sum_probs=47.6
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
+||+|+|+|||+||+||+.+. |.++.+++. ++.++.|++ |+..
T Consensus 17 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~--------~~~~~~vd~--------~~~~------------------- 61 (105)
T 4euy_A 17 EQQLVLLFIKTENCGVCDVMLRKVNYVLENYN--------YVEKIEILL--------QDMQ------------------- 61 (105)
T ss_dssp CSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT--------TEEEEEEEE--------CCC--------------------
T ss_pred cCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC--------CceEEEEEC--------CCCH-------------------
Confidence 689999999999999999988 888777652 477787775 1110
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
.+.+.|+++++|++++++ +|+++.+
T Consensus 62 --------~l~~~~~v~~~Pt~~~~~-~G~~~~~ 86 (105)
T 4euy_A 62 --------EIAGRYAVFTGPTVLLFY-NGKEILR 86 (105)
T ss_dssp ----------------CCCCEEEEEE-TTEEEEE
T ss_pred --------HHHHhcCCCCCCEEEEEe-CCeEEEE
Confidence 245678999999999995 9998754
No 125
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=98.92 E-value=1.7e-09 Score=92.17 Aligned_cols=70 Identities=16% Similarity=0.244 Sum_probs=53.3
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
+||+|+++|||+||++|+.+. |.+++++++. .++.++.|++ +..
T Consensus 20 ~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~------~~~~~~~vd~--------~~~-------------------- 65 (112)
T 3d6i_A 20 GDKLIVLYFHTSWAEPCKALKQVFEAISNEPSN------SNVSFLSIDA--------DEN-------------------- 65 (112)
T ss_dssp TTCCEEEEEECCC--CHHHHHHHHHHHHHCGGG------TTSEEEEEET--------TTC--------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCC------CCEEEEEEec--------ccC--------------------
Confidence 489999999999999999998 8888887641 3588888874 210
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+.+.|+++++|+++++ ++|+++.+
T Consensus 66 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~~ 91 (112)
T 3d6i_A 66 -------SEISELFEISAVPYFIII-HKGTILKE 91 (112)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred -------HHHHHHcCCCcccEEEEE-ECCEEEEE
Confidence 135677999999999888 69998763
No 126
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=98.92 E-value=1.4e-09 Score=93.32 Aligned_cols=69 Identities=22% Similarity=0.230 Sum_probs=56.8
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
+||+|+|+|||+||++|+.+. |.+++++++ +++.++.|++ |+. +
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-------~~v~~~~vd~--------~~~------------------~- 61 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMG-------DKLKIVKIDV--------DEN------------------Q- 61 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHT-------TTCEEEEEET--------TTC------------------C-
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhC-------CCcEEEEEEC--------CCC------------------H-
Confidence 799999999999999999998 999998884 2588888875 210 0
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
.+.+.|+++++|+++++ ++|+++.+
T Consensus 62 --------~l~~~~~v~~~Pt~~~~-~~G~~~~~ 86 (112)
T 2voc_A 62 --------ETAGKYGVMSIPTLLVL-KDGEVVET 86 (112)
T ss_dssp --------SHHHHTTCCSBSEEEEE-ETTEEEEE
T ss_pred --------HHHHHcCCCcccEEEEE-eCCEEEEE
Confidence 15667999999999999 99998753
No 127
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=98.91 E-value=3.4e-09 Score=88.81 Aligned_cols=69 Identities=16% Similarity=0.161 Sum_probs=55.2
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
.||+|+++|||+||++|+.+. |.++.++++ +++.++.|++ |+.
T Consensus 16 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-------~~v~~~~v~~--------~~~-------------------- 60 (105)
T 1nsw_A 16 GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHA-------DKVTVAKLNV--------DEN-------------------- 60 (105)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHST-------TTCEEEEEET--------TTC--------------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CCcEEEEEEC--------cCC--------------------
Confidence 579999999999999999998 888888774 2488888875 211
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+.+.|+++++|+++++ ++|+++.+
T Consensus 61 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~~ 86 (105)
T 1nsw_A 61 -------PETTSQFGIMSIPTLILF-KGGRPVKQ 86 (105)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred -------HHHHHHcCCccccEEEEE-eCCeEEEE
Confidence 125667999999999999 89998753
No 128
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=98.91 E-value=2.8e-10 Score=105.63 Aligned_cols=77 Identities=14% Similarity=0.188 Sum_probs=54.5
Q ss_pred eeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCce
Q 008311 339 VNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWY 416 (570)
Q Consensus 339 Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~ 416 (570)
+.....+||+|+|+|||+||+||+.+. |.++.+..+. ++.++.|++ | .+.. +
T Consensus 39 ~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~-------~~~~~~v~~-d-------~~~~---------~-- 92 (164)
T 1sen_A 39 KKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISEL-------SHNFVMVNL-E-------DEEE---------P-- 92 (164)
T ss_dssp HHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHH-------HTTSEEEEE-E-------GGGS---------C--
T ss_pred HHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhc-------CCeEEEEEe-c-------CCch---------H--
Confidence 444456899999999999999999999 7776655431 356788876 1 1110 0
Q ss_pred eeccccccChHHHHHHHHhCCC--CCCceEEEECCCCcEEcc
Q 008311 417 TVYHPTLIDRAVIRYVKDVWHF--KNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 417 aV~fP~l~D~~~~~~L~~~y~V--~~IPtlVVLDpqGkVv~~ 456 (570)
+.+.|++ .++|+++++|++|+++.+
T Consensus 93 ---------------~~~~~~~~~~~~Pt~~~~d~~G~~~~~ 119 (164)
T 1sen_A 93 ---------------KDEDFSPDGGYIPRILFLDPSGKVHPE 119 (164)
T ss_dssp ---------------SCGGGCTTCSCSSEEEEECTTSCBCTT
T ss_pred ---------------HHHHhcccCCcCCeEEEECCCCCEEEE
Confidence 1123445 669999999999999864
No 129
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=98.90 E-value=1.9e-09 Score=97.92 Aligned_cols=69 Identities=7% Similarity=0.040 Sum_probs=55.0
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
.||+|+|+|||+||+||+.+. |.+++++++ +++.++.|++ |+. +
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-------~~v~~~~vd~--------d~~------------------~- 67 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVK-------NFAVIYLVDI--------TEV------------------P- 67 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHT-------TTEEEEEEET--------TTC------------------C-
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhC-------CCeEEEEEcc--------ccC------------------H-
Confidence 489999999999999999999 999998884 2588888875 111 0
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
.+.+.|+++++|+++++ .+|+++..
T Consensus 68 --------~~~~~~~i~~~Pt~~~~-~~G~~v~~ 92 (142)
T 1qgv_A 68 --------DFNKMYELYDPCTVMFF-FRNKHIMI 92 (142)
T ss_dssp --------TTTTSSCSCSSCEEEEE-ETTEEEEE
T ss_pred --------HHHHHcCCCCCCEEEEE-ECCcEEEE
Confidence 13567999999999999 58888763
No 130
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=98.90 E-value=4e-09 Score=88.11 Aligned_cols=69 Identities=13% Similarity=0.202 Sum_probs=55.8
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
++|+|+++|||+||++|+.+. +.+++++++ +++.++.|++ |+.
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--------~~~-------------------- 62 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYE-------GKADILKLDV--------DEN-------------------- 62 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--------TTC--------------------
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhc-------CCcEEEEEEC--------CcC--------------------
Confidence 899999999999999999998 999998885 2488888874 211
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+.+.|+++++|++++++ +|+++.+
T Consensus 63 -------~~~~~~~~v~~~Pt~~~~~-~G~~~~~ 88 (106)
T 3die_A 63 -------PSTAAKYEVMSIPTLIVFK-DGQPVDK 88 (106)
T ss_dssp -------HHHHHHTTCCSBSEEEEEE-TTEEEEE
T ss_pred -------HHHHHhCCCcccCEEEEEe-CCeEEEE
Confidence 1256679999999999995 9988753
No 131
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.90 E-value=1.4e-09 Score=108.19 Aligned_cols=68 Identities=12% Similarity=0.182 Sum_probs=56.2
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
+||+|+|+|||+||+||+.+. +.+++++++ +++.++.|++ |+.
T Consensus 25 ~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~-------~~~~~~~vd~--------~~~-------------------- 69 (287)
T 3qou_A 25 MTTPVLFYFWSERSQHCLQLTPILESLAAQYN-------GQFILAKLDC--------DAE-------------------- 69 (287)
T ss_dssp TTSCEEEEEECTTCTTTTTTHHHHHHHHHHHT-------SSSEEEEEET--------TTC--------------------
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHHHHcC-------CCeEEEEEeC--------ccC--------------------
Confidence 589999999999999999999 999999885 2588888875 211
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVS 455 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~ 455 (570)
..+.+.|+|+++||++++ ++|+++.
T Consensus 70 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 94 (287)
T 3qou_A 70 -------QMIAAQFGLRAIPTVYLF-QNGQPVD 94 (287)
T ss_dssp -------HHHHHTTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCCCCCeEEEE-ECCEEEE
Confidence 136678999999999999 7898875
No 132
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=98.89 E-value=3.5e-09 Score=89.59 Aligned_cols=67 Identities=3% Similarity=-0.026 Sum_probs=53.3
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
+||+|+++|||+||+||+.+. |.++.+++. ++.++.|++ |+.
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~--------~~~~~~vd~--------~~~-------------------- 63 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP--------QAVFLEVDV--------HQC-------------------- 63 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--------TTS--------------------
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHHHHHCC--------CcEEEEEEC--------ccC--------------------
Confidence 689999999999999999998 888877662 477888774 211
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVS 455 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~ 455 (570)
..+.+.|+++++|+++++ ++|+++.
T Consensus 64 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 88 (107)
T 1gh2_A 64 -------QGTAATNNISATPTFQFF-RNKVRID 88 (107)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHhcCCCcccEEEEE-ECCeEEE
Confidence 125667999999999988 7898875
No 133
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.41 E-value=1.8e-10 Score=101.03 Aligned_cols=78 Identities=10% Similarity=0.158 Sum_probs=58.0
Q ss_pred CCeeeccccCCCEEEEEEecCCCHHhHHHH--H---HHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHH
Q 008311 336 KRRVNIEVLRRKNVLLLISDLDISQEELSI--L---EQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQ 410 (570)
Q Consensus 336 G~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L---~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~ 410 (570)
.+.+.....+||+|+|+|||+||++|+.+. + .++.+.++ .++.++.|++ +.+.
T Consensus 9 ~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~-------~~~~~~~vd~--------~~~~------- 66 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLE-------ARFVVASVSV--------DTPE------- 66 (130)
Confidence 456777778999999999999999999987 6 67766653 2466666653 1110
Q ss_pred cCCCceeeccccccChHHHHHHHHhCCCCCCceEEEECC-CCcE
Q 008311 411 SSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDP-QGRV 453 (570)
Q Consensus 411 ~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDp-qGkV 453 (570)
...+.+.|++.++|+++++|+ +|++
T Consensus 67 ------------------~~~~~~~~~v~~~Pt~~~~d~~~G~~ 92 (130)
T 2lst_A 67 ------------------GQELARRYRVPGTPTFVFLVPKAGAW 92 (130)
Confidence 123567799999999999997 4887
No 134
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.89 E-value=4.2e-09 Score=91.85 Aligned_cols=68 Identities=6% Similarity=-0.042 Sum_probs=53.4
Q ss_pred cCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeeccc
Q 008311 344 LRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHP 421 (570)
Q Consensus 344 LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP 421 (570)
++|+ |+|+|||+||++|+.+. |.++++++++ .++.++.|.+ ++.
T Consensus 21 ~~~~-vlv~f~a~wC~~C~~~~p~~~~~~~~~~~------~~v~~~~vd~--------~~~------------------- 66 (126)
T 1x5e_A 21 LEGD-WMIEFYAPWCPACQNLQPEWESFAEWGED------LEVNIAKVDV--------TEQ------------------- 66 (126)
T ss_dssp TSSE-EEEEEECSSCHHHHHHHHHHHHHHHHHGG------GTCEEEEEET--------TTC-------------------
T ss_pred hCCC-EEEEEECCCCHHHHHHhHHHHHHHHHhcc------CCeEEEEEEC--------cCC-------------------
Confidence 4555 89999999999999999 9999988852 3588888774 111
Q ss_pred cccChHHHHHHHHhCCCCCCceEEEECCCCcEE
Q 008311 422 TLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVV 454 (570)
Q Consensus 422 ~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv 454 (570)
..+.+.|+++++|+++++ ++|++.
T Consensus 67 --------~~~~~~~~v~~~Pt~~~~-~~G~~~ 90 (126)
T 1x5e_A 67 --------PGLSGRFIINALPTIYHC-KDGEFR 90 (126)
T ss_dssp --------HHHHHHTTCCSSSEEEEE-ETTEEE
T ss_pred --------HHHHHHcCCcccCEEEEE-eCCeEE
Confidence 125677999999999999 899864
No 135
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=98.89 E-value=1.2e-09 Score=96.86 Aligned_cols=69 Identities=17% Similarity=0.166 Sum_probs=55.4
Q ss_pred cCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeeccc
Q 008311 344 LRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHP 421 (570)
Q Consensus 344 LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP 421 (570)
.+||+|+|+|||+||++|+.+. |.+++++++ ++.++.|++ |+.
T Consensus 44 ~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--------~v~~~~v~~--------~~~------------------- 88 (139)
T 3d22_A 44 RDGKIVLANFSARWCGPSRQIAPYYIELSENYP--------SLMFLVIDV--------DEL------------------- 88 (139)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--------TTS-------------------
T ss_pred hcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--------CCEEEEEeC--------ccc-------------------
Confidence 4699999999999999999998 888887662 478888874 211
Q ss_pred cccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 422 TLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 422 ~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+.+.|+++++|+++++ ++|+++.+
T Consensus 89 --------~~~~~~~~v~~~Pt~~~~-~~G~~~~~ 114 (139)
T 3d22_A 89 --------SDFSASWEIKATPTFFFL-RDGQQVDK 114 (139)
T ss_dssp --------HHHHHHTTCCEESEEEEE-ETTEEEEE
T ss_pred --------HHHHHHcCCCcccEEEEE-cCCeEEEE
Confidence 136677999999999888 89998753
No 136
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=98.88 E-value=4.2e-09 Score=88.71 Aligned_cols=69 Identities=17% Similarity=0.247 Sum_probs=55.0
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
.||+|+|+|||+||++|+.+. |.++.++++ .++.++.|++ +.. +
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~--------~~~------------------~- 64 (108)
T 2trx_A 19 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQ-------GKLTVAKLNI--------DQN------------------P- 64 (108)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTEEEEEEET--------TTC------------------T-
T ss_pred cCCeEEEEEECCCCHhHHHHHHHHHHHHHHhC-------CCcEEEEEEC--------CCC------------------H-
Confidence 579999999999999999998 888888774 2577887774 110 0
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
.+.+.|++.++|+++++ ++|+++.+
T Consensus 65 --------~~~~~~~v~~~Pt~~~~-~~G~~~~~ 89 (108)
T 2trx_A 65 --------GTAPKYGIRGIPTLLLF-KNGEVAAT 89 (108)
T ss_dssp --------THHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred --------HHHHHcCCcccCEEEEE-eCCEEEEE
Confidence 15567999999999999 89998753
No 137
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.87 E-value=3.9e-09 Score=92.21 Aligned_cols=72 Identities=4% Similarity=0.012 Sum_probs=55.1
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
.||+|+|+|||+||++|+.+. +.++++++++. .+.++.++.|.+ +..
T Consensus 24 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~---~~~~~~~~~vd~--------~~~-------------------- 72 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQ---TKGKVKLAAVDA--------TVN-------------------- 72 (133)
T ss_dssp SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHH---TTTSEEEEEEET--------TTC--------------------
T ss_pred CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhh---cCCcEEEEEEEC--------CCC--------------------
Confidence 479999999999999999998 88999888621 123577777764 110
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVS 455 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~ 455 (570)
..+.+.|+++++|+++++++ |+++.
T Consensus 73 -------~~l~~~~~v~~~Pt~~~~~~-g~~~~ 97 (133)
T 1x5d_A 73 -------QVLASRYGIRGFPTIKIFQK-GESPV 97 (133)
T ss_dssp -------CHHHHHHTCCSSSEEEEEET-TEEEE
T ss_pred -------HHHHHhCCCCeeCeEEEEeC-CCceE
Confidence 12567799999999999998 87553
No 138
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=98.87 E-value=4.9e-09 Score=89.06 Aligned_cols=68 Identities=24% Similarity=0.161 Sum_probs=54.4
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
.||+|+|+|||+||++|+.+. |.+++++++ +++.++.|++ |.+
T Consensus 22 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~--------~~~-------------------- 66 (112)
T 1t00_A 22 NDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYG-------DKIEIVKLNI--------DEN-------------------- 66 (112)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--------TTC--------------------
T ss_pred CCCeEEEEEECCCCHhHHhcCHHHHHHHHHhc-------CCeEEEEEEc--------CCC--------------------
Confidence 479999999999999999998 888888874 2588888875 211
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVS 455 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~ 455 (570)
..+.+.|++.++|+++++ ++|+++.
T Consensus 67 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 91 (112)
T 1t00_A 67 -------PGTAAKYGVMSIPTLNVY-QGGEVAK 91 (112)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHhCCCCcccEEEEE-eCCEEEE
Confidence 125667999999998877 7999874
No 139
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.87 E-value=2.4e-09 Score=93.89 Aligned_cols=79 Identities=8% Similarity=0.073 Sum_probs=55.9
Q ss_pred CCCeeecccc-CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHc
Q 008311 335 TKRRVNIEVL-RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQS 411 (570)
Q Consensus 335 ~G~~Vsls~L-kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~ 411 (570)
++........ +||+|+|+|||+||++|+.+. |.+++++++. ..++.++.|.+ +..
T Consensus 13 ~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~-----~~~~~~~~vd~--------~~~--------- 70 (133)
T 2dj3_A 13 VGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKG-----QKDLVIAKMDA--------TAN--------- 70 (133)
T ss_dssp CTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTT-----SSSEEEEEECT--------TTS---------
T ss_pred cCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcC-----CCCEEEEEecC--------CcC---------
Confidence 3343433333 489999999999999999999 9999998852 23566666543 110
Q ss_pred CCCceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcE
Q 008311 412 SMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRV 453 (570)
Q Consensus 412 ~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkV 453 (570)
+ .+.+.|+++++|+++++++.|++
T Consensus 71 ---------~---------~~~~~~~v~~~Pt~~~~~~g~~~ 94 (133)
T 2dj3_A 71 ---------D---------ITNDQYKVEGFPTIYFAPSGDKK 94 (133)
T ss_dssp ---------C---------CCCSSCCCSSSSEEEEECTTCTT
T ss_pred ---------H---------HHHhhcCCCcCCEEEEEeCCCcc
Confidence 0 12346999999999999987754
No 140
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=98.87 E-value=5.8e-09 Score=87.66 Aligned_cols=69 Identities=14% Similarity=0.187 Sum_probs=54.4
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
.||+|+++|||+||++|+.+. |.+++++++ .++.++.|++ |+.
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~--------~~~-------------------- 62 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYK-------DKLKCVKLNT--------DES-------------------- 62 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--------TTC--------------------
T ss_pred CCCcEEEEEECCCCHhHHHHHHHHHHHHHHhC-------CceEEEEEEC--------CCC--------------------
Confidence 479999999999999999998 888888874 2488888874 211
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+.+.|+++++|+++++ ++|+++.+
T Consensus 63 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~~ 88 (107)
T 1dby_A 63 -------PNVASEYGIRSIPTIMVF-KGGKKCET 88 (107)
T ss_dssp -------HHHHHHHTCCSSCEEEEE-SSSSEEEE
T ss_pred -------HHHHHHCCCCcCCEEEEE-eCCEEEEE
Confidence 125667899999998887 79998753
No 141
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=98.87 E-value=5.3e-09 Score=92.10 Aligned_cols=68 Identities=10% Similarity=0.207 Sum_probs=53.7
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
+||+|+|+|||+||++|+.+. |.+++++++ ++.++.|++ |+.
T Consensus 37 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--------~v~~~~vd~--------d~~-------------------- 80 (124)
T 1xfl_A 37 SKTLVVVDFTASWCGPCRFIAPFFADLAKKLP--------NVLFLKVDT--------DEL-------------------- 80 (124)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--------SEEEEEEET--------TTS--------------------
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--------CcEEEEEEC--------ccC--------------------
Confidence 699999999999999999998 888877662 477777764 211
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+.+.|+++++|+++++ ++|+++.+
T Consensus 81 -------~~l~~~~~v~~~Pt~~~~-~~G~~~~~ 106 (124)
T 1xfl_A 81 -------KSVASDWAIQAMPTFMFL-KEGKILDK 106 (124)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred -------HHHHHHcCCCccCEEEEE-ECCEEEEE
Confidence 136678999999998877 89998754
No 142
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=98.87 E-value=4e-09 Score=96.07 Aligned_cols=68 Identities=7% Similarity=0.092 Sum_probs=54.8
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
+||+|+|+|||+||++|+.+. |.+++++++ ++.++.|++ ++.
T Consensus 31 ~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--------~v~~~~vd~--------~~~-------------------- 74 (153)
T 2wz9_A 31 AKSLLVVHFWAPWAPQCAQMNEVMAELAKELP--------QVSFVKLEA--------EGV-------------------- 74 (153)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--------TTS--------------------
T ss_pred CCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC--------CeEEEEEEC--------CCC--------------------
Confidence 489999999999999999988 888877652 577888875 211
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+.+.|+++++|++++++ +|+++.+
T Consensus 75 -------~~l~~~~~v~~~Pt~~~~~-~G~~~~~ 100 (153)
T 2wz9_A 75 -------PEVSEKYEISSVPTFLFFK-NSQKIDR 100 (153)
T ss_dssp -------HHHHHHTTCCSSSEEEEEE-TTEEEEE
T ss_pred -------HHHHHHcCCCCCCEEEEEE-CCEEEEE
Confidence 1356779999999999999 9998753
No 143
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=98.87 E-value=2.3e-08 Score=97.73 Aligned_cols=69 Identities=4% Similarity=-0.069 Sum_probs=54.5
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
.||+|+|+|||+||+||+.+. +.++++++++ .+.++.++.|++ + .|+
T Consensus 29 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~----~~~~v~~~~vd~-~-----~~~--------------------- 77 (244)
T 3q6o_A 29 SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKA----WRPALYLAALDC-A-----EET--------------------- 77 (244)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGG----GTTTEEEEEEET-T-----STT---------------------
T ss_pred CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHh----ccCcEEEEEEeC-C-----chh---------------------
Confidence 359999999999999999999 9999999863 134688888875 1 011
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCC
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQ 450 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpq 450 (570)
...+.+.|+|+++|+++++++.
T Consensus 78 ------~~~l~~~~~v~~~Pt~~~~~~g 99 (244)
T 3q6o_A 78 ------NSAVCRDFNIPGFPTVRFFXAF 99 (244)
T ss_dssp ------THHHHHHTTCCSSSEEEEECTT
T ss_pred ------hHHHHHHcCCCccCEEEEEeCC
Confidence 1246778999999999999973
No 144
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=98.87 E-value=3e-09 Score=94.90 Aligned_cols=76 Identities=17% Similarity=0.186 Sum_probs=55.0
Q ss_pred cCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeeccc
Q 008311 344 LRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHP 421 (570)
Q Consensus 344 LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP 421 (570)
+++ +|+|+|||+||+||+.+. |.++++++ ++.++.|++.+ +.+....
T Consensus 30 ~~~-~vlv~F~a~wC~~C~~~~p~l~~l~~~~---------~v~~~~vd~~~------~~~~~~~--------------- 78 (135)
T 3emx_A 30 LQG-DAILAVYSKTCPHCHRDWPQLIQASKEV---------DVPIVMFIWGS------LIGEREL--------------- 78 (135)
T ss_dssp HTS-SEEEEEEETTCHHHHHHHHHHHHHHTTC---------CSCEEEEEECT------TCCHHHH---------------
T ss_pred hCC-cEEEEEECCcCHhhhHhChhHHHHHHHC---------CCEEEEEECCC------chhhhhh---------------
Confidence 355 899999999999999998 77776654 27788888622 1111111
Q ss_pred cccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 422 TLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 422 ~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
| ....+.+.|++.++|++++++ +|+++.+
T Consensus 79 ---d--~~~~l~~~~~v~~~Pt~~~~~-~G~~v~~ 107 (135)
T 3emx_A 79 ---S--AARLEMNKAGVEGTPTLVFYK-EGRIVDK 107 (135)
T ss_dssp ---H--HHHHHHHHHTCCSSSEEEEEE-TTEEEEE
T ss_pred ---h--hhHHHHHHcCCceeCeEEEEc-CCEEEEE
Confidence 1 134578889999999888887 9998764
No 145
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=98.87 E-value=5.8e-09 Score=90.59 Aligned_cols=69 Identities=13% Similarity=0.148 Sum_probs=55.6
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
.||+|+|+|||+||++|+.+. |.+++++++ .++.++.|++ |+.
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~-------~~v~~~~vd~--------d~~-------------------- 74 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPRLEKMVAKQH-------GKVVMAKVDI--------DDH-------------------- 74 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TSSEEEEEET--------TTT--------------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CCeEEEEEeC--------CCC--------------------
Confidence 579999999999999999998 888888774 2588888874 211
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+.+.|++.++|+++++ ++|+++.+
T Consensus 75 -------~~l~~~~~v~~~Pt~~~~-~~G~~~~~ 100 (119)
T 1w4v_A 75 -------TDLAIEYEVSAVPTVLAM-KNGDVVDK 100 (119)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred -------HHHHHHcCCCcccEEEEE-eCCcEEEE
Confidence 136677999999999999 89998753
No 146
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=98.86 E-value=1.5e-09 Score=97.00 Aligned_cols=74 Identities=12% Similarity=0.141 Sum_probs=48.8
Q ss_pred ccccCCCEEEEEEecCCCHHhHHHHHHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecc
Q 008311 341 IEVLRRKNVLLLISDLDISQEELSILEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYH 420 (570)
Q Consensus 341 ls~LkGKvVlL~FwAsWCpPCr~e~L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~f 420 (570)
++..+||+|+|+|||+||+||+.+. ..++++.+ .+.|+++.+ | .|+
T Consensus 35 l~~~~~k~vvv~F~a~wC~~C~~~~--p~l~~l~~-------~~~v~~~~v-d-----~~~------------------- 80 (133)
T 3cxg_A 35 FSSTQNSSIVIKFGAVWCKPCNKIK--EYFKNQLN-------YYYVTLVDI-D-----VDI------------------- 80 (133)
T ss_dssp HTC-CCSEEEEEEECTTCHHHHHTH--HHHHGGGG-------TEECEEEEE-E-----TTT-------------------
T ss_pred HHhcCCCEEEEEEECCCCHHHHHHH--HHHHHHHH-------hcCEEEEEE-e-----ccc-------------------
Confidence 4556799999999999999999975 23344431 234555544 1 111
Q ss_pred ccccChHHHHHHHHhCCCCCCceEEEE-CCCCc--EEcc
Q 008311 421 PTLIDRAVIRYVKDVWHFKNKPILVVL-DPQGR--VVSP 456 (570)
Q Consensus 421 P~l~D~~~~~~L~~~y~V~~IPtlVVL-DpqGk--Vv~~ 456 (570)
...+.+.|+++++|+++++ |++|+ ++.+
T Consensus 81 --------~~~l~~~~~v~~~Pt~~~~~~~~g~g~~~~~ 111 (133)
T 3cxg_A 81 --------HPKLNDQHNIKALPTFEFYFNLNNEWVLVHT 111 (133)
T ss_dssp --------CHHHHHHTTCCSSSEEEEEEEETTEEEEEEE
T ss_pred --------hHHHHHhcCCCCCCEEEEEEecCCCeEEEEE
Confidence 0236678999999999999 45665 6653
No 147
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=98.86 E-value=3.6e-09 Score=91.88 Aligned_cols=70 Identities=11% Similarity=0.056 Sum_probs=53.0
Q ss_pred cCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeeccc
Q 008311 344 LRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHP 421 (570)
Q Consensus 344 LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP 421 (570)
.+||+|+++|||+|||||+.+. +.+++++++ ++.++.|.+ .++
T Consensus 35 ~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--------~~~~~~vd~-------~~~-------------------- 79 (124)
T 1faa_A 35 AGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL--------DVIFLKLDC-------NQE-------------------- 79 (124)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEEC-------SST--------------------
T ss_pred cCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC--------CCEEEEEec-------Ccc--------------------
Confidence 3789999999999999999998 888887763 467777764 111
Q ss_pred cccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 422 TLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 422 ~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
+ ..+.+.|+++++|++ +++++|+++.+
T Consensus 80 ---~----~~~~~~~~v~~~Pt~-~~~~~G~~~~~ 106 (124)
T 1faa_A 80 ---N----KTLAKELGIRVVPTF-KILKENSVVGE 106 (124)
T ss_dssp ---T----HHHHHHHCCSSSSEE-EEEETTEEEEE
T ss_pred ---h----HHHHHHcCCCeeeEE-EEEeCCcEEEE
Confidence 1 235677999999995 45589998754
No 148
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.85 E-value=8.6e-09 Score=86.34 Aligned_cols=70 Identities=14% Similarity=0.147 Sum_probs=56.0
Q ss_pred cCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeeccc
Q 008311 344 LRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHP 421 (570)
Q Consensus 344 LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP 421 (570)
-+||+|+|+|||+||++|+.+. |.++.++++ +++.++.|++ |+.
T Consensus 19 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--------~~~------------------- 64 (109)
T 3tco_A 19 RNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYK-------GKAVFGRLNV--------DEN------------------- 64 (109)
T ss_dssp HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTSEEEEEET--------TTC-------------------
T ss_pred hcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhC-------CCceEEEEcc--------ccC-------------------
Confidence 3689999999999999999998 888888874 2577777764 111
Q ss_pred cccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 422 TLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 422 ~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+.+.|++.++|+++++ ++|+++.+
T Consensus 65 --------~~~~~~~~i~~~Pt~~~~-~~g~~~~~ 90 (109)
T 3tco_A 65 --------QKIADKYSVLNIPTTLIF-VNGQLVDS 90 (109)
T ss_dssp --------HHHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred --------HHHHHhcCcccCCEEEEE-cCCcEEEe
Confidence 135667999999999999 99998764
No 149
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=98.85 E-value=7.2e-09 Score=87.49 Aligned_cols=68 Identities=12% Similarity=0.244 Sum_probs=54.7
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
++|+|+|+|||+||++|+.+. +.++.++++ +++.++.|++ |+.
T Consensus 21 ~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~-------~~v~~~~vd~--------~~~-------------------- 65 (111)
T 3gnj_A 21 EGKACLVMFSRKNCHVCQKVTPVLEELRLNYE-------ESFGFYYVDV--------EEE-------------------- 65 (111)
T ss_dssp SCCCEEEEEECSSCHHHHHHHHHHHHHHHHTT-------TTSEEEEEET--------TTC--------------------
T ss_pred cCCEEEEEEeCCCChhHHHHHHHHHHHHHHcC-------CceEEEEEEC--------CcC--------------------
Confidence 579999999999999999998 888888774 2588888875 111
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVS 455 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~ 455 (570)
..+.+.|+++++|+++++ ++|+++.
T Consensus 66 -------~~l~~~~~v~~~Pt~~~~-~~g~~~~ 90 (111)
T 3gnj_A 66 -------KTLFQRFSLKGVPQILYF-KDGEYKG 90 (111)
T ss_dssp -------HHHHHHTTCCSSCEEEEE-ETTEEEE
T ss_pred -------hhHHHhcCCCcCCEEEEE-ECCEEEE
Confidence 135677999999999999 7898874
No 150
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=98.84 E-value=1.1e-08 Score=85.53 Aligned_cols=69 Identities=17% Similarity=0.180 Sum_probs=55.8
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
+||+|+|+||++||++|+.+. |.++.++++ +++.++.|++ +..
T Consensus 19 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--------~~~-------------------- 63 (107)
T 2i4a_A 19 ASGLVLVDFWAEWCGPCKMIGPALGEIGKEFA-------GKVTVAKVNI--------DDN-------------------- 63 (107)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHHT-------TSEEEEEEET--------TTC--------------------
T ss_pred CCCEEEEEEECCCChhHHHHhHHHHHHHHHhC-------CcEEEEEEEC--------CCC--------------------
Confidence 579999999999999999998 888888874 2588888875 110
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+.+.|++.++|+++++ ++|+++.+
T Consensus 64 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~~ 89 (107)
T 2i4a_A 64 -------PETPNAYQVRSIPTLMLV-RDGKVIDK 89 (107)
T ss_dssp -------CHHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred -------HHHHHhcCCCccCEEEEE-eCCEEEEE
Confidence 025667999999999999 99998753
No 151
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=98.84 E-value=5.7e-09 Score=87.26 Aligned_cols=69 Identities=13% Similarity=0.105 Sum_probs=54.3
Q ss_pred cCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeeccc
Q 008311 344 LRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHP 421 (570)
Q Consensus 344 LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP 421 (570)
.+||+|+|+|||+||++|+.+. +.++.++++ ++.++.|+. |+.
T Consensus 18 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~--------~~~~~~vd~--------~~~------------------- 62 (105)
T 3m9j_A 18 AGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS--------NVIFLEVDV--------DDC------------------- 62 (105)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHST--------TSEEEEEET--------TTC-------------------
T ss_pred cCCCeEEEEEECCCChhhHHHHHHHHHHHHHcc--------CeEEEEEEh--------hhh-------------------
Confidence 4689999999999999999998 888887763 377777764 211
Q ss_pred cccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 422 TLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 422 ~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+.+.|+++++|+++++ ++|+++.+
T Consensus 63 --------~~~~~~~~v~~~Pt~~~~-~~g~~~~~ 88 (105)
T 3m9j_A 63 --------QDVASESEVKSMPTFQFF-KKGQKVGE 88 (105)
T ss_dssp --------HHHHHHTTCCBSSEEEEE-ETTEEEEE
T ss_pred --------HHHHHHcCCCcCcEEEEE-ECCeEEEE
Confidence 125677999999999999 78888754
No 152
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=98.83 E-value=6.4e-09 Score=90.26 Aligned_cols=68 Identities=9% Similarity=0.125 Sum_probs=53.6
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
+||+|+|+|||+||++|+.+. |.++.++++ ++.++.|++ |+.
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~--------~v~~~~vd~--------~~~-------------------- 72 (114)
T 2oe3_A 29 QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYP--------DVRFVKCDV--------DES-------------------- 72 (114)
T ss_dssp HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCT--------TSEEEEEET--------TTC--------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--------CCEEEEEEC--------CCC--------------------
Confidence 689999999999999999998 888887763 377887774 211
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+.++|+++++|+++++ ++|+++.+
T Consensus 73 -------~~l~~~~~v~~~Pt~~~~-~~G~~~~~ 98 (114)
T 2oe3_A 73 -------PDIAKECEVTAMPTFVLG-KDGQLIGK 98 (114)
T ss_dssp -------HHHHHHTTCCSBSEEEEE-ETTEEEEE
T ss_pred -------HHHHHHCCCCcccEEEEE-eCCeEEEE
Confidence 125677999999998876 89998753
No 153
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.82 E-value=3.4e-09 Score=93.77 Aligned_cols=70 Identities=16% Similarity=0.172 Sum_probs=53.8
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
+||+|+|+|||+||++|+.+. |.++++++++ .+.++.++.|.+ ++
T Consensus 33 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~----~~~~v~~~~vd~--------~~--------------------- 79 (140)
T 2dj1_A 33 DKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKD----NDPPIAVAKIDA--------TS--------------------- 79 (140)
T ss_dssp TCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHS----SSSCCEEEEECT--------TT---------------------
T ss_pred cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhc----cCCceEEEEEeC--------cc---------------------
Confidence 589999999999999999998 9999999863 123466666543 11
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEE
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVV 454 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv 454 (570)
+ ..+.+.|+++++|+++++ ++|++.
T Consensus 80 --~----~~~~~~~~v~~~Pt~~~~-~~G~~~ 104 (140)
T 2dj1_A 80 --A----SMLASKFDVSGYPTIKIL-KKGQAV 104 (140)
T ss_dssp --C----HHHHHHTTCCSSSEEEEE-ETTEEE
T ss_pred --c----HHHHHHCCCCccCeEEEE-ECCcEE
Confidence 0 236678999999999999 789854
No 154
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=98.82 E-value=2.4e-09 Score=99.45 Aligned_cols=95 Identities=13% Similarity=0.131 Sum_probs=62.2
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
.||+|+|+|||+||+||+... +.+. .++.+.. +..+|.|.+ |. +..
T Consensus 43 ~~KpVlV~F~A~WC~~Ck~m~p~~~~~-~~~~~~~-----~~~fv~V~v-D~-----e~~-------------------- 90 (151)
T 3ph9_A 43 SKKPLMVIHHLEDCQYSQALKKVFAQN-EEIQEMA-----QNKFIMLNL-MH-----ETT-------------------- 90 (151)
T ss_dssp HTCCEEEEECCTTCHHHHHHHHHHHHC-HHHHHHH-----HHTCEEEEE-SS-----CCS--------------------
T ss_pred cCCcEEEEEECCCCHhHHHHHHHHhcC-HHHHHHh-----hcCeEEEEe-cC-----Cch--------------------
Confidence 689999999999999999976 3332 1221100 122566665 10 000
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEccccchhHhhhcCCCCCCCchhHHHHhhh
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSPNALHMMWIWGSNAFPFTSLREEALWKE 483 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~na~~~I~~~G~~aFPFt~~~~e~L~~e 483 (570)
+ +...|++.++|+++++|++|+++.+ .+-..+...|++.+...+.++++
T Consensus 91 --~------~~~~~~v~~~PT~~f~~~~G~~v~~----~~G~~~~~~~~~~~~~~~~ll~~ 139 (151)
T 3ph9_A 91 --D------KNLSPDGQYVPRIMFVDPSLTVRAD----IAGRYSNRLYTYEPRDLPLLIEN 139 (151)
T ss_dssp --C------GGGCTTCCCSSEEEEECTTSCBCTT----CCCSCTTSTTCCCGGGHHHHHHH
T ss_pred --h------hHhhcCCCCCCEEEEECCCCCEEEE----EeCCcCCcccccchhhHHHHHHH
Confidence 1 1234788999999999999999874 12223456788988888877754
No 155
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=98.82 E-value=8.9e-09 Score=87.25 Aligned_cols=69 Identities=16% Similarity=0.195 Sum_probs=56.0
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
+||+|+|+||++||++|+.+. |.++.++++ .++.++.|++ |..
T Consensus 24 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~v~~~~v~~--------~~~-------------------- 68 (115)
T 1thx_A 24 AEQPVLVYFWASWCGPCQLMSPLINLAANTYS-------DRLKVVKLEI--------DPN-------------------- 68 (115)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTT-------TTCEEEEEES--------TTC--------------------
T ss_pred CCceEEEEEECCCCHHHHHhHHHHHHHHHHhC-------CcEEEEEEEc--------CCC--------------------
Confidence 589999999999999999998 888888774 2488888875 211
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+.+.|++.++|+++++ ++|+++.+
T Consensus 69 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~~ 94 (115)
T 1thx_A 69 -------PTTVKKYKVEGVPALRLV-KGEQILDS 94 (115)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred -------HHHHHHcCCCceeEEEEE-cCCEEEEE
Confidence 125677999999999999 99998763
No 156
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=98.82 E-value=4.2e-09 Score=93.42 Aligned_cols=69 Identities=17% Similarity=0.262 Sum_probs=55.1
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
+||+|+|+|||+||++|+.+. |.++.++++ +++.++.|++ |+. +
T Consensus 39 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-------~~v~~~~vd~--------~~~------------------~- 84 (128)
T 2o8v_B 39 ADGAILVDFWAEWCGPAKMIAPILDEIADEYQ-------GKLTVAKLNI--------DQN------------------P- 84 (128)
T ss_dssp CSSEEEEEEECSSCHHHHHTHHHHHHHHHHTT-------TTEEEEEEET--------TTC------------------C-
T ss_pred cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhc-------CCeEEEEEEC--------CCC------------------H-
Confidence 589999999999999999998 888888774 2588888875 111 0
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
.+.+.|++.++|+++++ ++|+++.+
T Consensus 85 --------~l~~~~~v~~~Pt~~~~-~~G~~~~~ 109 (128)
T 2o8v_B 85 --------GTAPKYGIRGIPTLLLF-KNGEVAAT 109 (128)
T ss_dssp --------TTSGGGTCCSSSEEEEE-ETTEEEEE
T ss_pred --------HHHHHcCCCccCEEEEE-eCCEEEEE
Confidence 14457899999999999 89998753
No 157
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=98.81 E-value=8.1e-09 Score=92.85 Aligned_cols=70 Identities=6% Similarity=0.071 Sum_probs=55.9
Q ss_pred cCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeeccc
Q 008311 344 LRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHP 421 (570)
Q Consensus 344 LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP 421 (570)
-+||+|+|+|||+||++|+.+. |.+++++++ .++.++.|++ |+.
T Consensus 53 ~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~-------~~~~~~~vd~--------~~~------------------- 98 (148)
T 3p2a_A 53 QDDLPMVIDFWAPWCGPCRSFAPIFAETAAERA-------GKVRFVKVNT--------EAE------------------- 98 (148)
T ss_dssp TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--------TTC-------------------
T ss_pred hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcC-------CceEEEEEEC--------cCC-------------------
Confidence 4789999999999999999998 999998874 2577787764 211
Q ss_pred cccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 422 TLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 422 ~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+.+.|++.++|+++++ ++|+++.+
T Consensus 99 --------~~l~~~~~v~~~Pt~~~~-~~G~~~~~ 124 (148)
T 3p2a_A 99 --------PALSTRFRIRSIPTIMLY-RNGKMIDM 124 (148)
T ss_dssp --------HHHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred --------HHHHHHCCCCccCEEEEE-ECCeEEEE
Confidence 135678999999999998 59998753
No 158
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=98.81 E-value=1.1e-08 Score=87.60 Aligned_cols=68 Identities=12% Similarity=0.073 Sum_probs=53.2
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
+||+|+|+|||+||++|+.+. |.+++++++ ++.++.|++ +..
T Consensus 25 ~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~--------~v~~~~vd~--------~~~-------------------- 68 (112)
T 1syr_A 25 QNELVIVDFFAEWCGPCKRIAPFYEECSKTYT--------KMVFIKVDV--------DEV-------------------- 68 (112)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--------TTT--------------------
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC--------CCEEEEEEC--------CCC--------------------
Confidence 689999999999999999998 888887763 478888874 111
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+.+.|++.++|+++++ ++|+++.+
T Consensus 69 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~~ 94 (112)
T 1syr_A 69 -------SEVTEKENITSMPTFKVY-KNGSSVDT 94 (112)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred -------HHHHHHcCCCcccEEEEE-ECCcEEEE
Confidence 135667999999997766 69998753
No 159
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=98.81 E-value=1.2e-08 Score=85.25 Aligned_cols=70 Identities=16% Similarity=0.122 Sum_probs=54.5
Q ss_pred cCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeeccc
Q 008311 344 LRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHP 421 (570)
Q Consensus 344 LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP 421 (570)
.+||+|+++||++||++|+.+. |.++.++++ .++.++.|++ |+
T Consensus 18 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~--------~~-------------------- 62 (106)
T 1xwb_A 18 ASGKLVVLDFFATWCGPCKMISPKLVELSTQFA-------DNVVVLKVDV--------DE-------------------- 62 (106)
T ss_dssp HTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTEEEEEEET--------TT--------------------
T ss_pred cCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhC-------CCeEEEEEec--------cc--------------------
Confidence 4789999999999999999998 888887773 3577888774 21
Q ss_pred cccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 422 TLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 422 ~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
+ ..+.+.|+++++|+++++ ++|+++.+
T Consensus 63 ---~----~~~~~~~~v~~~Pt~~~~-~~G~~~~~ 89 (106)
T 1xwb_A 63 ---C----EDIAMEYNISSMPTFVFL-KNGVKVEE 89 (106)
T ss_dssp ---C----HHHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred ---h----HHHHHHcCCCcccEEEEE-cCCcEEEE
Confidence 0 135677999999997766 78988753
No 160
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=98.81 E-value=7.9e-09 Score=87.57 Aligned_cols=68 Identities=12% Similarity=0.117 Sum_probs=53.7
Q ss_pred CCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeeccccc
Q 008311 346 RKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPTL 423 (570)
Q Consensus 346 GKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~l 423 (570)
||+|+|+||++||++|+.+. |.++.++++ +++.++.|++ |.
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~vd~--------~~---------------------- 66 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYA-------GKVIFLKVDV--------DA---------------------- 66 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTSEEEEEET--------TT----------------------
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-------CCeEEEEEEC--------Cc----------------------
Confidence 89999999999999999998 888888774 2588888874 21
Q ss_pred cChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 424 IDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 424 ~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
+ ..+.+.|+++++|+++++ ++|+++.+
T Consensus 67 -~----~~~~~~~~v~~~Pt~~~~-~~G~~~~~ 93 (112)
T 1ep7_A 67 -V----AAVAEAAGITAMPTFHVY-KDGVKADD 93 (112)
T ss_dssp -T----HHHHHHHTCCBSSEEEEE-ETTEEEEE
T ss_pred -h----HHHHHHcCCCcccEEEEE-ECCeEEEE
Confidence 0 135667899999997766 89998753
No 161
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=98.81 E-value=6.1e-09 Score=90.80 Aligned_cols=69 Identities=12% Similarity=0.087 Sum_probs=54.0
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
.||+|+|+|||+||++|+.+. |.++++++. ++.++.|++ |+.
T Consensus 22 ~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~~--------~v~~~~vd~--------~~~-------------------- 65 (118)
T 2f51_A 22 APGLVLVDFFATWCGPCQRLGQILPSIAEANK--------DVTFIKVDV--------DKN-------------------- 65 (118)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--------TTC--------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--------CeEEEEEEC--------CCC--------------------
Confidence 489999999999999999988 888877662 578888875 111
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECC---CCcEEcc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDP---QGRVVSP 456 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDp---qGkVv~~ 456 (570)
..+.+.|+++++|++++++. +|+++.+
T Consensus 66 -------~~~~~~~~i~~~Pt~~~~~~~~~~G~~~~~ 95 (118)
T 2f51_A 66 -------GNAADAYGVSSIPALFFVKKEGNEIKTLDQ 95 (118)
T ss_dssp -------HHHHHHTTCCSSSEEEEEEEETTEEEEEEE
T ss_pred -------HHHHHhcCCCCCCEEEEEeCCCCcceEEEe
Confidence 12567799999999999976 4777653
No 162
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=98.81 E-value=9.1e-09 Score=88.85 Aligned_cols=67 Identities=9% Similarity=0.170 Sum_probs=53.1
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
+||+|+++||++||++|+.+. |.++.++++ ++.++.|++ |+.
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--------~~~~~~vd~--------~~~-------------------- 76 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMAPVFADLAKKFP--------NAVFLKVDV--------DEL-------------------- 76 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--------TTC--------------------
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--------CcEEEEEEC--------CCC--------------------
Confidence 589999999999999999998 888887763 377887774 210
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVS 455 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~ 455 (570)
..+.+.|+++++|+++++ ++|+++.
T Consensus 77 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 101 (122)
T 2vlu_A 77 -------KPIAEQFSVEAMPTFLFM-KEGDVKD 101 (122)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCCcccEEEEE-eCCEEEE
Confidence 135677999999997777 8999875
No 163
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=98.80 E-value=1.3e-08 Score=84.95 Aligned_cols=68 Identities=16% Similarity=0.160 Sum_probs=54.9
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
+||+++|+||++||++|+.+. |.++.++++ +++.++.|++ +..
T Consensus 17 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~--------~~~-------------------- 61 (109)
T 2yzu_A 17 QHPLVLVDFWAEWCAPCRMIAPILEEIAKEYE-------GKLLVAKLDV--------DEN-------------------- 61 (109)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHTB-------TTBEEEEEET--------TTC--------------------
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhh-------CceEEEEEEC--------CCC--------------------
Confidence 579999999999999999998 888888774 2588888874 211
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVS 455 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~ 455 (570)
..+.+.|++.++|+++++ ++|+++.
T Consensus 62 -------~~~~~~~~v~~~Pt~~~~-~~g~~~~ 86 (109)
T 2yzu_A 62 -------PKTAMRYRVMSIPTVILF-KDGQPVE 86 (109)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HhHHHhCCCCcCCEEEEE-eCCcEee
Confidence 125667999999999999 8999875
No 164
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=98.80 E-value=1e-08 Score=94.30 Aligned_cols=69 Identities=9% Similarity=0.046 Sum_probs=56.1
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
.||+|+|+|||+||+||+.+. |.+++++++ .++.++.|++ |+.
T Consensus 63 ~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~-------~~v~~~~vd~--------~~~-------------------- 107 (155)
T 2ppt_A 63 DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLA-------GQVRLAKIDT--------QAH-------------------- 107 (155)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHT-------TTCEEEEEET--------TTS--------------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHcc-------CCEEEEEEeC--------Ccc--------------------
Confidence 689999999999999999999 999999885 2488888874 211
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+.++|+++++|+++++ ++|+++.+
T Consensus 108 -------~~l~~~~~i~~~Pt~~~~-~~G~~~~~ 133 (155)
T 2ppt_A 108 -------PAVAGRHRIQGIPAFILF-HKGRELAR 133 (155)
T ss_dssp -------THHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred -------HHHHHHcCCCcCCEEEEE-eCCeEEEE
Confidence 126678999999999999 79998753
No 165
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=98.80 E-value=6.6e-09 Score=89.77 Aligned_cols=67 Identities=4% Similarity=-0.121 Sum_probs=54.0
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
.||+|+|+|||+||++|+.+. |.+++++++ +++.++.|++ +..
T Consensus 20 ~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~vd~--------~~~-------------------- 64 (122)
T 3aps_A 20 GKTHWVVDFYAPWCGPCQNFAPEFELLARMIK-------GKVRAGKVDC--------QAY-------------------- 64 (122)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHT-------TTCEEEEEET--------TTC--------------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CCeEEEEEeC--------cCC--------------------
Confidence 478999999999999999998 999988884 2578888875 111
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcE
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRV 453 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkV 453 (570)
..+.+.|+++++|+++++++.|++
T Consensus 65 -------~~~~~~~~v~~~Pt~~~~~~~~~~ 88 (122)
T 3aps_A 65 -------PQTCQKAGIKAYPSVKLYQYERAK 88 (122)
T ss_dssp -------HHHHHHTTCCSSSEEEEEEEEGGG
T ss_pred -------HHHHHHcCCCccceEEEEeCCCcc
Confidence 125667999999999999988874
No 166
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=98.79 E-value=1.4e-08 Score=83.85 Aligned_cols=68 Identities=7% Similarity=0.044 Sum_probs=54.2
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
+||+|+++||++||++|+.+. +.++.++++ ++.++.|++ |..
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~--------~~~~~~v~~--------~~~-------------------- 58 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAPIIEELAEDYP--------QVGFGKLNS--------DEN-------------------- 58 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--------TTC--------------------
T ss_pred cCCcEEEEEECCCChhHHHHhHHHHHHHHHcC--------CceEEEEEC--------CCC--------------------
Confidence 689999999999999999998 888877763 277888874 211
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+.+.|+++++|+++++ ++|+++.+
T Consensus 59 -------~~~~~~~~v~~~Pt~~~~-~~g~~~~~ 84 (104)
T 2e0q_A 59 -------PDIAARYGVMSLPTVIFF-KDGEPVDE 84 (104)
T ss_dssp -------HHHHHHTTCCSSCEEEEE-ETTEEEEE
T ss_pred -------HHHHHhCCccccCEEEEE-ECCeEhhh
Confidence 125667999999999999 89998753
No 167
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.78 E-value=6.1e-09 Score=92.65 Aligned_cols=70 Identities=7% Similarity=0.025 Sum_probs=52.8
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
++|+|+|+|||+||+||+.+. |.+++++++ +.++.++.|.+ ++..
T Consensus 25 ~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~------~~~v~~~~vd~--------~~~~------------------- 71 (137)
T 2dj0_A 25 KRVTWIVEFFANWSNDCQSFAPIYADLSLKYN------CTGLNFGKVDV--------GRYT------------------- 71 (137)
T ss_dssp TTSCEEEEECCTTCSTTTTTHHHHHHHHHHHC------SSSCEEEECCT--------TTCH-------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhC------CCCeEEEEEeC--------ccCH-------------------
Confidence 567999999999999999998 999998884 23577777654 2111
Q ss_pred ccChHHHHHHHHhCCCC------CCceEEEECCCCcEEcc
Q 008311 423 LIDRAVIRYVKDVWHFK------NKPILVVLDPQGRVVSP 456 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~------~IPtlVVLDpqGkVv~~ 456 (570)
.+.++|++. ++|+++++ ++|+++.+
T Consensus 72 --------~~~~~~~v~~~~~~~~~Pt~~~~-~~G~~~~~ 102 (137)
T 2dj0_A 72 --------DVSTRYKVSTSPLTKQLPTLILF-QGGKEAMR 102 (137)
T ss_dssp --------HHHHHTTCCCCSSSSCSSEEEEE-SSSSEEEE
T ss_pred --------HHHHHccCcccCCcCCCCEEEEE-ECCEEEEE
Confidence 134456666 99999999 78998754
No 168
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=98.77 E-value=2.9e-08 Score=108.98 Aligned_cols=72 Identities=6% Similarity=-0.031 Sum_probs=57.2
Q ss_pred CCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeeccccc
Q 008311 346 RKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPTL 423 (570)
Q Consensus 346 GKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~l 423 (570)
||+|+|+|||+||+||+.++ +.++++++++ .+.++.|+.|++ +.+
T Consensus 30 ~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~----~~~~v~~~~VD~--------d~d--------------------- 76 (519)
T 3t58_A 30 SSAWAVEFFASWCGHAIAFAPTWKELANDVKD----WRPALNLAVLDC--------AEE--------------------- 76 (519)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHGG----GTTTEEEEEEET--------TSG---------------------
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHhhC----cCCcEEEEEEEC--------Ccc---------------------
Confidence 59999999999999999999 9999999963 134688888875 111
Q ss_pred cChHHHHHHHHhCCCCCCceEEEECC---CCcEE
Q 008311 424 IDRAVIRYVKDVWHFKNKPILVVLDP---QGRVV 454 (570)
Q Consensus 424 ~D~~~~~~L~~~y~V~~IPtlVVLDp---qGkVv 454 (570)
....+.+.|+|+++|+++++++ +|+.+
T Consensus 77 ----~~~~l~~~~~V~~~PTl~~f~~g~~~G~~~ 106 (519)
T 3t58_A 77 ----TNSAVCREFNIAGFPTVRFFQAFTKNGSGA 106 (519)
T ss_dssp ----GGHHHHHHTTCCSBSEEEEECTTCCSCCCE
T ss_pred ----ccHHHHHHcCCcccCEEEEEcCcccCCCce
Confidence 0124677899999999999997 66643
No 169
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=98.77 E-value=9.7e-09 Score=88.09 Aligned_cols=69 Identities=10% Similarity=0.130 Sum_probs=52.6
Q ss_pred cCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeeccc
Q 008311 344 LRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHP 421 (570)
Q Consensus 344 LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP 421 (570)
.++|+++++|||+||++|+... |.++.+++ .++.++.|.+ ++
T Consensus 17 ~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~--------~~v~~~~vd~--------~~-------------------- 60 (110)
T 2l6c_A 17 EGLSDAIVFFHKNLCPHCKNMEKVLDKFGARA--------PQVAISSVDS--------EA-------------------- 60 (110)
T ss_dssp TTCSEEEEEEECSSCSTHHHHHHHHHHHHTTC--------TTSCEEEEEG--------GG--------------------
T ss_pred HcCCCEEEEEECCCCHhHHHHHHHHHHHHHHC--------CCcEEEEEcC--------cC--------------------
Confidence 3579999999999999999987 66655443 2577777764 21
Q ss_pred cccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 422 TLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 422 ~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
+ ..+.+.|+++++|+++++ ++|+++.+
T Consensus 61 ---~----~~l~~~~~v~~~Pt~~~~-~~G~~v~~ 87 (110)
T 2l6c_A 61 ---R----PELMKELGFERVPTLVFI-RDGKVAKV 87 (110)
T ss_dssp ---C----HHHHHHTTCCSSCEEEEE-ESSSEEEE
T ss_pred ---C----HHHHHHcCCcccCEEEEE-ECCEEEEE
Confidence 0 125677999999999999 89998764
No 170
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=98.76 E-value=2.1e-08 Score=83.53 Aligned_cols=69 Identities=10% Similarity=0.129 Sum_probs=54.0
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
.||+++++||++||++|+.+. |.++.++++ .++.++.|++ ++.
T Consensus 17 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--------~~~-------------------- 61 (105)
T 1fb6_A 17 SEVPVMVDFWAPWCGPCKLIAPVIDELAKEYS-------GKIAVYKLNT--------DEA-------------------- 61 (105)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--------TTC--------------------
T ss_pred CCCcEEEEEECCCChHHHHHHHHHHHHHHHhc-------CceEEEEEcC--------cch--------------------
Confidence 479999999999999999998 888888774 2477787774 111
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+.+.|+++++|+++++ ++|+++.+
T Consensus 62 -------~~~~~~~~v~~~Pt~~~~-~~g~~~~~ 87 (105)
T 1fb6_A 62 -------PGIATQYNIRSIPTVLFF-KNGERKES 87 (105)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred -------HHHHHhCCCCcccEEEEE-eCCeEEEE
Confidence 135677999999998877 79998753
No 171
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=98.76 E-value=1.7e-08 Score=95.98 Aligned_cols=84 Identities=8% Similarity=0.020 Sum_probs=53.4
Q ss_pred eeccccCCCEEEEEEecCCCHHhHHHH-----HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCC
Q 008311 339 VNIEVLRRKNVLLLISDLDISQEELSI-----LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSM 413 (570)
Q Consensus 339 Vsls~LkGKvVlL~FwAsWCpPCr~e~-----L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~M 413 (570)
+.....+||+|+|+|||+||+||+... ..++-+.+++ +|.+|-|.. |+..+--..+
T Consensus 32 ~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~-------~fv~ikVD~--------de~~~l~~~y---- 92 (173)
T 3ira_A 32 FEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE-------AFVSIKVDR--------EERPDIDNIY---- 92 (173)
T ss_dssp HHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH-------HCEEEEEET--------TTCHHHHHHH----
T ss_pred HHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHh-------cCceeeeCC--------cccCcHHHHH----
Confidence 344445799999999999999999854 2345555531 354444432 2211111111
Q ss_pred CceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 414 PWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 414 PW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
...+...+++.++|+++++||+|+++..
T Consensus 93 ---------------~~~~q~~~gv~g~Pt~v~l~~dG~~v~~ 120 (173)
T 3ira_A 93 ---------------MTVCQIILGRGGWPLNIIMTPGKKPFFA 120 (173)
T ss_dssp ---------------HHHHHHHHSCCCSSEEEEECTTSCEEEE
T ss_pred ---------------HHHHHHHcCCCCCcceeeECCCCCceee
Confidence 1122334799999999999999999874
No 172
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=98.76 E-value=1.5e-08 Score=85.39 Aligned_cols=72 Identities=10% Similarity=0.085 Sum_probs=52.9
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
++|+|+|+|||+||++|+.+. +.++.++++. ...++.++.|.+ ++.
T Consensus 20 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~----~~~~~~~~~vd~--------~~~-------------------- 67 (111)
T 3uvt_A 20 AEGITFIKFYAPWCGHCKTLAPTWEELSKKEFP----GLAGVKIAEVDC--------TAE-------------------- 67 (111)
T ss_dssp HSSEEEEEEECSSCHHHHHHHHHHHHHHTCCCC----C-CCEEEEEEET--------TTC--------------------
T ss_pred cCCcEEEEEECCCChhHHHhhHHHHHHHHHhhc----cCCceEEEEEec--------ccc--------------------
Confidence 489999999999999999988 7777776542 123566776663 111
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+.+.|+++++|+++++ ++|+++.+
T Consensus 68 -------~~l~~~~~v~~~Pt~~~~-~~g~~~~~ 93 (111)
T 3uvt_A 68 -------RNICSKYSVRGYPTLLLF-RGGKKVSE 93 (111)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred -------HhHHHhcCCCcccEEEEE-eCCcEEEe
Confidence 125677999999998888 78887643
No 173
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.76 E-value=3e-08 Score=86.84 Aligned_cols=72 Identities=10% Similarity=0.041 Sum_probs=54.1
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
.+|+|+|+|||+||+||+.+. +.++.++++.. ..+.++.++.|.. ++.
T Consensus 32 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~--~~~~~v~~~~vd~--------~~~-------------------- 81 (127)
T 3h79_A 32 PEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQK--RNHLTFVAARIDG--------EKY-------------------- 81 (127)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTS--TTTTTEEEEEEET--------TTC--------------------
T ss_pred CCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhc--ccCCCeEEEEEEc--------ccc--------------------
Confidence 489999999999999999998 88888887531 1124566666653 110
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcE
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRV 453 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkV 453 (570)
..+.++|+|+++|+++++++.|++
T Consensus 82 -------~~l~~~~~v~~~Pt~~~~~~g~~~ 105 (127)
T 3h79_A 82 -------PDVIERMRVSGFPTMRYYTRIDKQ 105 (127)
T ss_dssp -------HHHHHHTTCCSSSEEEEECSSCSS
T ss_pred -------HhHHHhcCCccCCEEEEEeCCCCC
Confidence 136678999999999999887764
No 174
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=98.75 E-value=1.5e-08 Score=89.77 Aligned_cols=67 Identities=9% Similarity=0.080 Sum_probs=53.5
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
+||+|+|+|||+||++|+.+. |.++.++++ ++.++.|++ |+.
T Consensus 36 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--------~v~~~~vd~--------d~~-------------------- 79 (125)
T 1r26_A 36 EDILTVAWFTAVWCGPCKTIERPMEKIAYEFP--------TVKFAKVDA--------DNN-------------------- 79 (125)
T ss_dssp SSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT--------TSEEEEEET--------TTC--------------------
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--------CCEEEEEEC--------CCC--------------------
Confidence 689999999999999999998 888877762 478888874 211
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVS 455 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~ 455 (570)
..+.+.|++.++|+++++ ++|+++.
T Consensus 80 -------~~l~~~~~v~~~Pt~~i~-~~G~~~~ 104 (125)
T 1r26_A 80 -------SEIVSKCRVLQLPTFIIA-RSGKMLG 104 (125)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCCcccEEEEE-eCCeEEE
Confidence 126677999999997777 8999875
No 175
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.75 E-value=1.1e-08 Score=89.37 Aligned_cols=66 Identities=6% Similarity=-0.020 Sum_probs=53.2
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
.+|+|+|+|||+||++|+.+. |.+++++++ +.+.++.|++ |+.
T Consensus 34 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~-------~~~~~~~vd~--------~~~-------------------- 78 (130)
T 2dml_A 34 SDGLWLVEFYAPWCGHCQRLTPEWKKAATALK-------DVVKVGAVNA--------DKH-------------------- 78 (130)
T ss_dssp CSSCEEEEEECTTCSTTGGGHHHHHHHHHHTT-------TTSEEEEEET--------TTC--------------------
T ss_pred CCCeEEEEEECCCCHHHHhhCHHHHHHHHHhc-------CceEEEEEeC--------CCC--------------------
Confidence 479999999999999999998 888888874 2477777764 110
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGR 452 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGk 452 (570)
..+.+.|+++++|+++++++.|+
T Consensus 79 -------~~l~~~~~v~~~Pt~~~~~~~~~ 101 (130)
T 2dml_A 79 -------QSLGGQYGVQGFPTIKIFGANKN 101 (130)
T ss_dssp -------HHHHHHHTCCSSSEEEEESSCTT
T ss_pred -------HHHHHHcCCCccCEEEEEeCCCC
Confidence 13567799999999999999988
No 176
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=98.74 E-value=1.1e-07 Score=97.75 Aligned_cols=169 Identities=11% Similarity=0.120 Sum_probs=101.1
Q ss_pred CCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeeccccc
Q 008311 346 RKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPTL 423 (570)
Q Consensus 346 GKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~l 423 (570)
.+.++++|++.||++|+... +.++.++++. .+-+++|.. +.. .
T Consensus 135 ~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~-------~i~f~~vd~--------~~~--~------------------ 179 (361)
T 3uem_A 135 IKTHILLFLPKSVSDYDGKLSNFKTAAESFKG-------KILFIFIDS--------DHT--D------------------ 179 (361)
T ss_dssp CCEEEEEECCSSSSSHHHHHHHHHHHHGGGTT-------TCEEEEECT--------TSG--G------------------
T ss_pred CCcEEEEEEeCCchhHHHHHHHHHHHHHHccC-------ceEEEEecC--------ChH--H------------------
Confidence 35789999999999999988 8888888852 355565542 210 0
Q ss_pred cChHHHHHHHHhCCCCC--CceEEEECCCCcEEccccchhHhhhcCCCCCCCchhHHHHhhh---c-------------C
Q 008311 424 IDRAVIRYVKDVWHFKN--KPILVVLDPQGRVVSPNALHMMWIWGSNAFPFTSLREEALWKE---E-------------T 485 (570)
Q Consensus 424 ~D~~~~~~L~~~y~V~~--IPtlVVLDpqGkVv~~na~~~I~~~G~~aFPFt~~~~e~L~~e---~-------------~ 485 (570)
...+.+.||+++ +|++++++..+.... +....-+++.....+...+ . .
T Consensus 180 -----~~~~~~~fgi~~~~~P~~~~~~~~~~~~k---------y~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~ 245 (361)
T 3uem_A 180 -----NQRILEFFGLKKEECPAVRLITLEEEMTK---------YKPESEELTAERITEFCHRFLEGKIKPHLMSQELPED 245 (361)
T ss_dssp -----GHHHHHHTTCCTTTCSEEEEEECC--CCE---------ECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTT
T ss_pred -----HHHHHHHcCCCccCCccEEEEEcCCcccc---------cCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcc
Confidence 123566789987 999999987443211 0001112333333222211 0 1
Q ss_pred ccccccccCCCccccccc-cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCC--CEEEEEEecCCchhhhhhccccccc
Q 008311 486 WRLELLVDGIDPLVLDWI-KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARI--PLEMVYVGKSTKRDKCGESWQPLQL 561 (570)
Q Consensus 486 w~~~ll~d~~d~~i~~~~-~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~--~fEiv~Vs~d~~~e~~~~~~~~~~~ 561 (570)
|....+..-.+......+ ..+|.+.++|.+. |++|+++.|.+.+++++.+. ++-++.|..+... .+.+++-+.
T Consensus 246 ~~~~~v~~l~~~~f~~~~~~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~---~~~~~v~~~ 322 (361)
T 3uem_A 246 WDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE---VEAVKVHSF 322 (361)
T ss_dssp TTTSSSEEECTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCB---CSSCCCCSS
T ss_pred cccCCcEEeecCchhhhcccCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccc---hhhcCCccc
Confidence 111111000000111112 4789999999999 99999999999999987433 4666666655544 345788889
Q ss_pred ccccc
Q 008311 562 KSLVT 566 (570)
Q Consensus 562 ~~~~~ 566 (570)
|++++
T Consensus 323 Pt~~~ 327 (361)
T 3uem_A 323 PTLKF 327 (361)
T ss_dssp SEEEE
T ss_pred CeEEE
Confidence 99865
No 177
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=98.74 E-value=2.1e-08 Score=83.38 Aligned_cols=69 Identities=12% Similarity=0.126 Sum_probs=53.4
Q ss_pred cCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeeccc
Q 008311 344 LRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHP 421 (570)
Q Consensus 344 LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP 421 (570)
.+||+|+++||++|||+|+.+. |.++.++++ ++.++.|++ ++.
T Consensus 17 ~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--------~~~~~~v~~--------~~~------------------- 61 (104)
T 2vim_A 17 NKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP--------EVEFAKVDV--------DQN------------------- 61 (104)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--------TTC-------------------
T ss_pred cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC--------CCEEEEEec--------cCC-------------------
Confidence 4689999999999999999988 877777652 577888874 210
Q ss_pred cccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 422 TLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 422 ~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+.+.|++.++|++++++ +|+++.+
T Consensus 62 --------~~~~~~~~v~~~Pt~~~~~-~g~~~~~ 87 (104)
T 2vim_A 62 --------EEAAAKYSVTAMPTFVFIK-DGKEVDR 87 (104)
T ss_dssp --------HHHHHHTTCCSSSEEEEEE-TTEEEEE
T ss_pred --------HHHHHHcCCccccEEEEEe-CCcEEEE
Confidence 1256679999999988775 8988754
No 178
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=98.73 E-value=1.7e-08 Score=90.35 Aligned_cols=68 Identities=16% Similarity=0.170 Sum_probs=54.4
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
.||+|+|+|||+||++|+.+. |.++.++++ +++.++.|.+ |+.
T Consensus 23 ~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~-------~~v~~~~vd~--------~~~-------------------- 67 (140)
T 3hz4_A 23 SKKPVVVMFYSPACPYCKAMEPYFEEYAKEYG-------SSAVFGRINI--------ATN-------------------- 67 (140)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHT-------TTSEEEEEET--------TTC--------------------
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhC-------CceEEEEEEC--------CcC--------------------
Confidence 389999999999999999998 999998885 2488888874 111
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVS 455 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~ 455 (570)
..+.+.|+++++|+++++ ++|+++.
T Consensus 68 -------~~l~~~~~v~~~Pt~~~~-~~G~~~~ 92 (140)
T 3hz4_A 68 -------PWTAEKYGVQGTPTFKFF-CHGRPVW 92 (140)
T ss_dssp -------HHHHHHHTCCEESEEEEE-ETTEEEE
T ss_pred -------HhHHHHCCCCcCCEEEEE-eCCcEEE
Confidence 125667899999998888 7898874
No 179
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.72 E-value=2.4e-08 Score=89.41 Aligned_cols=88 Identities=11% Similarity=0.044 Sum_probs=60.2
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
+||+|+|+|||+||+||+.+. |.++.+++. ++.++.|.+ +.. +
T Consensus 29 ~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~--------~v~~~~vd~--------~~~------------------~- 73 (135)
T 2dbc_A 29 KDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP--------ETKFVKAIV--------NSC------------------I- 73 (135)
T ss_dssp SSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS--------SEEEEEECC--------SSS------------------C-
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--------CcEEEEEEh--------hcC------------------c-
Confidence 468999999999999999998 888877652 455666553 110 0
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEccccchhHhhhcCCCCCCCchhHHHHhhh
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSPNALHMMWIWGSNAFPFTSLREEALWKE 483 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~na~~~I~~~G~~aFPFt~~~~e~L~~e 483 (570)
+.|+++++|++++++ +|+++.+-.- ...+|.. -|+....+.++++
T Consensus 74 -----------~~~~i~~~Pt~~~~~-~G~~v~~~~G--~~~~~~~--~~~~~~l~~~l~~ 118 (135)
T 2dbc_A 74 -----------EHYHDNCLPTIFVYK-NGQIEGKFIG--IIECGGI--NLKLEELEWKLSE 118 (135)
T ss_dssp -----------SSCCSSCCSEEEEES-SSSCSEEEES--TTTTTCT--TCCHHHHHHHHHH
T ss_pred -----------ccCCCCCCCEEEEEE-CCEEEEEEEe--EEeeCCC--cCCHHHHHHHHHH
Confidence 358999999999997 9998764221 1123332 3566666666655
No 180
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=98.72 E-value=1.5e-08 Score=87.14 Aligned_cols=69 Identities=10% Similarity=0.090 Sum_probs=51.0
Q ss_pred ccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecc
Q 008311 343 VLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYH 420 (570)
Q Consensus 343 ~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~f 420 (570)
..+||+|+++|||+||++|+.+. +.++++++ ++.++.|++ |+
T Consensus 30 ~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---------~~~~~~vd~--------~~------------------- 73 (117)
T 2xc2_A 30 QHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY---------DAIFVKVDV--------DK------------------- 73 (117)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS---------SSEEEEEET--------TT-------------------
T ss_pred hCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc---------CcEEEEEEC--------Cc-------------------
Confidence 34799999999999999999987 66655432 466666663 21
Q ss_pred ccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 421 PTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 421 P~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
+ ..+.+.|+++++|+++++ ++|+++.+
T Consensus 74 ----~----~~~~~~~~v~~~Pt~~~~-~~G~~~~~ 100 (117)
T 2xc2_A 74 ----L----EETARKYNISAMPTFIAI-KNGEKVGD 100 (117)
T ss_dssp ----S----HHHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred ----c----HHHHHHcCCCccceEEEE-eCCcEEEE
Confidence 0 135677999999997777 79998753
No 181
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=98.71 E-value=2.6e-08 Score=84.96 Aligned_cols=68 Identities=10% Similarity=0.141 Sum_probs=53.2
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
+||+|+|+||++||++|+.+. |.++.++++ ++.++.|++ |..
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--------~~~~~~v~~--------~~~-------------------- 70 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--------GAIFLKVDV--------DEL-------------------- 70 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--------TTS--------------------
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--------CcEEEEEEc--------ccC--------------------
Confidence 489999999999999999998 888877662 477777764 210
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+.+.|+++++|+++++ ++|+++.+
T Consensus 71 -------~~~~~~~~v~~~Pt~~~~-~~g~~~~~ 96 (118)
T 2vm1_A 71 -------KDVAEAYNVEAMPTFLFI-KDGEKVDS 96 (118)
T ss_dssp -------HHHHHHTTCCSBSEEEEE-ETTEEEEE
T ss_pred -------HHHHHHcCCCcCcEEEEE-eCCeEEEE
Confidence 135677999999998888 79998753
No 182
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=98.71 E-value=2.5e-08 Score=84.35 Aligned_cols=68 Identities=12% Similarity=0.277 Sum_probs=52.8
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
+||+|+|+||++||++|+.+. |.++.++++ ++.++.|++ |+.
T Consensus 25 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--------~v~~~~v~~--------~~~-------------------- 68 (113)
T 1ti3_A 25 SQKLIVVDFTASWCPPCKMIAPIFAELAKKFP--------NVTFLKVDV--------DEL-------------------- 68 (113)
T ss_dssp SSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--------SEEEEEEET--------TTC--------------------
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--------CcEEEEEEc--------ccc--------------------
Confidence 589999999999999999988 877777652 477777764 111
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+.+.|++.++|+++++ ++|+++.+
T Consensus 69 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~~ 94 (113)
T 1ti3_A 69 -------KAVAEEWNVEAMPTFIFL-KDGKLVDK 94 (113)
T ss_dssp -------HHHHHHHHCSSTTEEEEE-ETTEEEEE
T ss_pred -------HHHHHhCCCCcccEEEEE-eCCEEEEE
Confidence 125567899999999888 79998754
No 183
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=98.71 E-value=3.8e-08 Score=84.44 Aligned_cols=69 Identities=19% Similarity=0.225 Sum_probs=54.4
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
.||+|+|+|||+||++|+.+. |.++.++++ .++.++.|++ +..
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--------~~~-------------------- 73 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAPVLEEIATERA-------TDLTVAKLDV--------DTN-------------------- 73 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--------TTC--------------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CCeEEEEEEC--------CCC--------------------
Confidence 479999999999999999998 888888774 2588888875 211
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+.+.|++.++|+++++ ++|+++.+
T Consensus 74 -------~~~~~~~~i~~~Pt~~~~-~~g~~~~~ 99 (121)
T 2i1u_A 74 -------PETARNFQVVSIPTLILF-KDGQPVKR 99 (121)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred -------HHHHHhcCCCcCCEEEEE-ECCEEEEE
Confidence 125677999999999888 59988753
No 184
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=98.71 E-value=8e-08 Score=97.88 Aligned_cols=67 Identities=10% Similarity=0.051 Sum_probs=53.5
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
.||+|+|+|||+||+||+.+. +.+++++++ ..+.|+.|.+ |.+.
T Consensus 34 ~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~-------~~~~~~~v~~--------d~~~------------------- 79 (298)
T 3ed3_A 34 TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLD-------GVVQVAAVNC--------DLNK------------------- 79 (298)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTSEEEEEET--------TSTT-------------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHcc-------CCcEEEEEEc--------cCcc-------------------
Confidence 478999999999999999999 999998885 2488898885 2100
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCC
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQG 451 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqG 451 (570)
...+.+.|+|+++|+++++++.+
T Consensus 80 ------~~~l~~~~~I~~~Pt~~~~~~g~ 102 (298)
T 3ed3_A 80 ------NKALCAKYDVNGFPTLMVFRPPK 102 (298)
T ss_dssp ------THHHHHHTTCCBSSEEEEEECCC
T ss_pred ------CHHHHHhCCCCccceEEEEECCc
Confidence 12467789999999999998644
No 185
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=98.70 E-value=1e-08 Score=98.08 Aligned_cols=69 Identities=9% Similarity=-0.001 Sum_probs=55.3
Q ss_pred cCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeeccc
Q 008311 344 LRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHP 421 (570)
Q Consensus 344 LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP 421 (570)
.+||+|+|+|||+||+||+.+. +.++.++++ .++.++.|.+ +..
T Consensus 112 ~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~-------~~v~~~~vd~--------~~~------------------- 157 (210)
T 3apq_A 112 NSGELWFVNFYSPGCSHCHDLAPTWREFAKEVD-------GLLRIGAVNC--------GDD------------------- 157 (210)
T ss_dssp HHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTB-------TTBEEEEEET--------TTC-------------------
T ss_pred ccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhc-------CceEEEEEEC--------Ccc-------------------
Confidence 5789999999999999999999 999988874 2477777764 111
Q ss_pred cccChHHHHHHHHhCCCCCCceEEEECCCCcEEc
Q 008311 422 TLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVS 455 (570)
Q Consensus 422 ~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~ 455 (570)
..+.+.|+++++|+++++ ++|+++.
T Consensus 158 --------~~l~~~~~v~~~Pt~~~~-~~G~~~~ 182 (210)
T 3apq_A 158 --------RMLCRMKGVNSYPSLFIF-RSGMAAV 182 (210)
T ss_dssp --------HHHHHHTTCCSSSEEEEE-CTTSCCE
T ss_pred --------HHHHHHcCCCcCCeEEEE-ECCCcee
Confidence 125667999999999999 9998754
No 186
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=98.68 E-value=2.4e-08 Score=87.65 Aligned_cols=77 Identities=8% Similarity=0.116 Sum_probs=56.1
Q ss_pred CCCEEEEEEecC-------CCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCc
Q 008311 345 RRKNVLLLISDL-------DISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPW 415 (570)
Q Consensus 345 kGKvVlL~FwAs-------WCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW 415 (570)
+||+|+|+|||+ |||||+.+. |.+++++++ +++.++.|.+ .+. .. |
T Consensus 23 ~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~-------~~~~~~~vd~-------~~~--~~---------~ 77 (123)
T 1wou_A 23 NGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHIS-------EGCVFIYCQV-------GEK--PY---------W 77 (123)
T ss_dssp TTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCC-------TTEEEEEEEC-------CCH--HH---------H
T ss_pred CCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcC-------CCcEEEEEEC-------CCc--hh---------h
Confidence 589999999999 999999998 888877663 3688888875 121 11 1
Q ss_pred eeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 416 YTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 416 ~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
. |. ...+.+.|+++++|+++++++.++++..
T Consensus 78 ~--------d~--~~~~~~~~~i~~~Pt~~~~~~~~~~~g~ 108 (123)
T 1wou_A 78 K--------DP--NNDFRKNLKVTAVPTLLKYGTPQKLVES 108 (123)
T ss_dssp H--------CT--TCHHHHHHCCCSSSEEEETTSSCEEEGG
T ss_pred h--------ch--hHHHHHHCCCCeeCEEEEEcCCceEecc
Confidence 1 11 1236667999999999999985555543
No 187
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=98.66 E-value=2.3e-08 Score=96.71 Aligned_cols=68 Identities=18% Similarity=0.256 Sum_probs=54.3
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
+||+|+|+|||+||+||+.+. |.+++++++ .++.++.|++ |.. +
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-------~~v~~~~vd~--------d~~------------------~- 74 (222)
T 3dxb_A 29 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQ-------GKLTVAKLNI--------DQN------------------P- 74 (222)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--------TTC------------------T-
T ss_pred cCCEEEEEEECCcCHHHHHHHHHHHHHHHHhc-------CCcEEEEEEC--------CCC------------------H-
Confidence 589999999999999999999 999999885 2488888875 110 0
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVS 455 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~ 455 (570)
.+.+.|+|.++|++++++ +|+++.
T Consensus 75 --------~l~~~~~v~~~Pt~~~~~-~G~~~~ 98 (222)
T 3dxb_A 75 --------GTAPKYGIRGIPTLLLFK-NGEVAA 98 (222)
T ss_dssp --------TTGGGGTCCSBSEEEEEE-TTEEEE
T ss_pred --------HHHHHcCCCcCCEEEEEE-CCeEEE
Confidence 135679999999999985 898875
No 188
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=98.64 E-value=1.7e-08 Score=88.08 Aligned_cols=70 Identities=11% Similarity=0.107 Sum_probs=54.7
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
+||+|+|+|||+||++|+.+. |.++.++++. .++.++.|++ |..
T Consensus 32 ~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~------~~v~~~~vd~--------d~~-------------------- 77 (121)
T 2j23_A 32 GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAG------DKVGFYKVDV--------DEQ-------------------- 77 (121)
T ss_dssp SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHH------HHSEEEEEET--------TTC--------------------
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcC------CcEEEEEEEC--------cCC--------------------
Confidence 689999999999999999998 8888777652 2488888874 210
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+.+.|++.++|+++++ ++|+++.+
T Consensus 78 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~~ 103 (121)
T 2j23_A 78 -------SQIAQEVGIRAMPTFVFF-KNGQKIDT 103 (121)
T ss_dssp -------HHHHHHHTCCSSSEEEEE-ETTEEEEE
T ss_pred -------HHHHHHcCCCcccEEEEE-ECCeEEee
Confidence 125667899999999888 59998764
No 189
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=98.64 E-value=4.2e-08 Score=84.38 Aligned_cols=70 Identities=10% Similarity=0.025 Sum_probs=51.9
Q ss_pred cCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeeccc
Q 008311 344 LRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHP 421 (570)
Q Consensus 344 LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP 421 (570)
-+||+|+|+|||+||++|+.+. |.+++++++.. ....++.++.|.+ ++. +
T Consensus 23 ~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~--~~~~~v~~~~vd~--------~~~-----------~------- 74 (121)
T 2djj_A 23 DDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKS--EFKDRVVIAKVDA--------TAN-----------D------- 74 (121)
T ss_dssp CTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTS--SCTTSSEEEEEET--------TTS-----------C-------
T ss_pred cCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhc--ccCCceEEEEEEC--------ccc-----------c-------
Confidence 3789999999999999999999 99999988520 0012577777764 110 0
Q ss_pred cccChHHHHHHHHhCCCCCCceEEEECCCCcE
Q 008311 422 TLIDRAVIRYVKDVWHFKNKPILVVLDPQGRV 453 (570)
Q Consensus 422 ~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkV 453 (570)
+.+ +++++|+++++++.|++
T Consensus 75 ----------~~~--~v~~~Pt~~~~~~~~~~ 94 (121)
T 2djj_A 75 ----------VPD--EIQGFPTIKLYPAGAKG 94 (121)
T ss_dssp ----------CSS--CCSSSSEEEEECSSCTT
T ss_pred ----------ccc--ccCcCCeEEEEeCcCCC
Confidence 011 88999999999998873
No 190
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=98.63 E-value=9.7e-08 Score=84.97 Aligned_cols=68 Identities=18% Similarity=0.188 Sum_probs=53.1
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
+++.|+|+||++||++|+.+. |.++.++++ .++.++.|++ +..
T Consensus 49 ~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~-------~~v~~~~vd~--------~~~-------------------- 93 (140)
T 1v98_A 49 GAPLTLVDFFAPWCGPCRLVSPILEELARDHA-------GRLKVVKVNV--------DEH-------------------- 93 (140)
T ss_dssp CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTEEEEEEET--------TTC--------------------
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHHHHHHcc-------CceEEEEEEC--------CCC--------------------
Confidence 444499999999999999998 888888774 2588888874 211
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVS 455 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~ 455 (570)
..+.+.|++.++|+++++ ++|+++.
T Consensus 94 -------~~l~~~~~v~~~Pt~~~~-~~G~~~~ 118 (140)
T 1v98_A 94 -------PGLAARYGVRSVPTLVLF-RRGAPVA 118 (140)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHCCCCccCEEEEE-eCCcEEE
Confidence 125677999999999999 7999875
No 191
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=98.63 E-value=4.2e-08 Score=92.30 Aligned_cols=67 Identities=7% Similarity=0.110 Sum_probs=51.1
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
.+|+|++.|||+||+||+..- |.++-+++. +...|+-|.+ |+. |
T Consensus 40 ~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~-------~~v~f~kVDV--------De~------------------~- 85 (160)
T 2av4_A 40 DERLVCIRFGHDYDPDCMKMDELLYKVADDIK-------NFCVIYLVDI--------TEV------------------P- 85 (160)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHT-------TTEEEEEEET--------TTC------------------C-
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHcc-------CCcEEEEEEC--------CCC------------------H-
Confidence 358999999999999999987 888888874 2466777765 210 1
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEE
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVV 454 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv 454 (570)
| ++++|+|+++||++++- +|+.+
T Consensus 86 --e------~a~~y~V~siPT~~fFk-~G~~v 108 (160)
T 2av4_A 86 --D------FNTMYELYDPVSVMFFY-RNKHM 108 (160)
T ss_dssp --T------TTTTTTCCSSEEEEEEE-TTEEE
T ss_pred --H------HHHHcCCCCCCEEEEEE-CCEEE
Confidence 1 46679999999998884 66666
No 192
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=98.60 E-value=7e-08 Score=88.70 Aligned_cols=69 Identities=13% Similarity=0.124 Sum_probs=55.7
Q ss_pred CCC-EEEEEEecCCC--HHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeec
Q 008311 345 RRK-NVLLLISDLDI--SQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVY 419 (570)
Q Consensus 345 kGK-vVlL~FwAsWC--pPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~ 419 (570)
+++ +|+|+|||+|| +||+... |.++-+++. .++.|+-|++ |+.
T Consensus 31 ~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~-------~~v~~~KVdv--------De~----------------- 78 (137)
T 2qsi_A 31 HSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFP-------GRLVAAEVAA--------EAE----------------- 78 (137)
T ss_dssp TSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTST-------TTEEEEEECG--------GGH-----------------
T ss_pred cCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHcc-------CCcEEEEEEC--------CCC-----------------
Confidence 444 99999999999 9999988 888888774 3688888874 211
Q ss_pred cccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 420 HPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 420 fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+..+|+|++|||++++ ++|+++.+
T Consensus 79 ----------~~la~~ygV~siPTlilF-kdG~~v~~ 104 (137)
T 2qsi_A 79 ----------RGLMARFGVAVCPSLAVV-QPERTLGV 104 (137)
T ss_dssp ----------HHHHHHHTCCSSSEEEEE-ECCEEEEE
T ss_pred ----------HHHHHHcCCccCCEEEEE-ECCEEEEE
Confidence 236778999999999999 69999876
No 193
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.57 E-value=1.7e-07 Score=89.56 Aligned_cols=72 Identities=10% Similarity=0.012 Sum_probs=53.8
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
.|++++++|||+||+||+.+. +.++++++++ ++++++.++.|.+ ++ +
T Consensus 133 ~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~---~~~~~v~~~~vd~--------~~------------------~-- 181 (226)
T 1a8l_A 133 DQDVRILVFVTPTCPYCPLAVRMAHKFAIENTK---AGKGKILGDMVEA--------IE------------------Y-- 181 (226)
T ss_dssp CSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHH---TTCCCEEEEEEEG--------GG------------------C--
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHhccc---ccCCcEEEEEEEc--------cc------------------C--
Confidence 456779999999999999998 9999988852 1224677777764 21 0
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVS 455 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~ 455 (570)
..+.+.|+|+++|+++++ ++|+.+.
T Consensus 182 -------~~l~~~~~v~~~Pt~~~~-~~G~~~~ 206 (226)
T 1a8l_A 182 -------PEWADQYNVMAVPKIVIQ-VNGEDRV 206 (226)
T ss_dssp -------HHHHHHTTCCSSCEEEEE-ETTEEEE
T ss_pred -------HHHHHhCCCcccCeEEEE-eCCceeE
Confidence 125677999999997777 5888764
No 194
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=98.54 E-value=2.1e-08 Score=85.13 Aligned_cols=70 Identities=7% Similarity=0.068 Sum_probs=52.3
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
+||+|+|+|||+||++|+.+. +.++++++++ .+.++.++.|.. ++ .+
T Consensus 23 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~----~~~~v~~~~vd~--------~~------------------~~- 71 (120)
T 1mek_A 23 AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKA----EGSEIRLAKVDA--------TE------------------ES- 71 (120)
T ss_dssp HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTT----TCCCCBCEEEET--------TT------------------CC-
T ss_pred cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhc----cCCcEEEEEEcC--------CC------------------CH-
Confidence 689999999999999999988 8888888853 123455555543 11 01
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEE
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVV 454 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv 454 (570)
.+.++|+++++|+++++ ++|+++
T Consensus 72 --------~~~~~~~v~~~Pt~~~~-~~g~~~ 94 (120)
T 1mek_A 72 --------DLAQQYGVRGYPTIKFF-RNGDTA 94 (120)
T ss_dssp --------SSHHHHTCCSSSEEEEE-ESSCSS
T ss_pred --------HHHHHCCCCcccEEEEE-eCCCcC
Confidence 14556899999999999 688765
No 195
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.51 E-value=1.9e-07 Score=89.50 Aligned_cols=71 Identities=10% Similarity=0.068 Sum_probs=55.2
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
.+|+|+|+|||+||+||+.+. +.++.++++. ...++.++.|.+ ++.
T Consensus 146 ~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~----~~~~v~~~~vd~--------~~~-------------------- 193 (241)
T 3idv_A 146 DADIILVEFYAPWCGHCKKLAPEYEKAAKELSK----RSPPIPLAKVDA--------TAE-------------------- 193 (241)
T ss_dssp HCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHT----SSSCCCEEEEET--------TTC--------------------
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhc----cCCcEEEEEEEC--------CCC--------------------
Confidence 579999999999999999988 9999998863 134577777764 110
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVS 455 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~ 455 (570)
..+.+.|+|+++|++++++ +|+.+.
T Consensus 194 -------~~l~~~~~v~~~Pt~~~~~-~g~~~~ 218 (241)
T 3idv_A 194 -------TDLAKRFDVSGYPTLKIFR-KGRPYD 218 (241)
T ss_dssp -------HHHHHHTTCCSSSEEEEEE-TTEEEE
T ss_pred -------HHHHHHcCCcccCEEEEEE-CCeEEE
Confidence 1267789999999999997 577654
No 196
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.51 E-value=8.1e-07 Score=100.75 Aligned_cols=164 Identities=6% Similarity=-0.105 Sum_probs=105.9
Q ss_pred CCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeeccccc
Q 008311 346 RKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPTL 423 (570)
Q Consensus 346 GKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~l 423 (570)
++++++.|+|+||++|.... +.++.+++++ ++.++.|.. +. +
T Consensus 563 ~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~-------~v~~~~vd~--------~~------------------~--- 606 (780)
T 3apo_A 563 DEVWMVDFYSPWSHPSQVLMPEWKRMARTLTG-------LINVGSVDC--------GQ------------------Y--- 606 (780)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-------TSEEEEEET--------TT------------------T---
T ss_pred CCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC-------CeEEEEEEC--------cc------------------h---
Confidence 57889999999999999987 8888888852 465665542 10 0
Q ss_pred cChHHHHHHHHhCCCCCCceEEEECCCCc----EEccccchhHhhhcCCCCCCCchhHHHHhhhcCccccccccCCCcc-
Q 008311 424 IDRAVIRYVKDVWHFKNKPILVVLDPQGR----VVSPNALHMMWIWGSNAFPFTSLREEALWKEETWRLELLVDGIDPL- 498 (570)
Q Consensus 424 ~D~~~~~~L~~~y~V~~IPtlVVLDpqGk----Vv~~na~~~I~~~G~~aFPFt~~~~e~L~~e~~w~~~ll~d~~d~~- 498 (570)
..+.+.|++++.|+++++.+.++ .+..+| .+.+.....+...+.. ...+.+ ++..
T Consensus 607 ------~~l~~~~~v~~~Pti~~~~~~~~~~~~~~~y~g-----------~~~~~~~l~~fi~~~~--~~~v~~-l~~~~ 666 (780)
T 3apo_A 607 ------HSFCTQENVQRYPEIRFYPQKSSKAYQYHSYNG-----------WNRDAYSLRSWGLGFL--PQASID-LTPQT 666 (780)
T ss_dssp ------HHHHHHTTCCSSSEEEEECCCSSSCCSCEECCC-----------SCCSHHHHHHHHHTTS--CCCSEE-ECHHH
T ss_pred ------HHHHHHcCCCCCCeEEEEcCCCcCccchhhcCC-----------CCCCHHHHHHHHhhhc--cccccc-CCHHH
Confidence 12556799999999999986543 221111 1222222222222211 000110 1111
Q ss_pred ccc-cccCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 499 VLD-WIKEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 499 i~~-~~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
..+ ....||.+.++|.+. |++|+.+.|.+.+++++.+.++.++.|..+...+ +.+.+++.++|++++
T Consensus 667 ~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~vd~~~~~~-~~~~~~v~~~Pt~~~ 735 (780)
T 3apo_A 667 FNEKVLQGKTHWVVDFYAPWSGPSQNFAPEFELLARMIKGKVRAGKVDCQAYPQ-TCQKAGIKAYPSVKL 735 (780)
T ss_dssp HHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHH-HHHHTTCCSSSEEEE
T ss_pred HHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCceEEEEECCCCHH-HHHhcCCCcCCEEEE
Confidence 111 124678899999888 9999999999999998755578888888876554 555678889999865
No 197
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=98.48 E-value=3e-08 Score=87.40 Aligned_cols=69 Identities=17% Similarity=0.247 Sum_probs=50.3
Q ss_pred CCCEEEEEEecCCCH--------------HhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHH
Q 008311 345 RRKNVLLLISDLDIS--------------QEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFET 408 (570)
Q Consensus 345 kGKvVlL~FwAsWCp--------------PCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~ 408 (570)
+||+|+++|||+||+ ||+... +.++.++++ +++.++.|++ |+.
T Consensus 20 ~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~-------~~~~~~~vd~--------d~~------ 78 (123)
T 1oaz_A 20 ADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQ-------GKLTVAKLNI--------DQN------ 78 (123)
T ss_dssp CSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------------CEEEEEET--------TSC------
T ss_pred CCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhc-------CCeEEEEEEC--------CCC------
Confidence 589999999999999 999988 888777764 2477787775 111
Q ss_pred HHcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 409 LQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 409 ~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
+ .+.+.|+++++|+++++ ++|+++.+
T Consensus 79 ------------~---------~l~~~~~v~~~Pt~~~~-~~G~~~~~ 104 (123)
T 1oaz_A 79 ------------P---------GTAPKYGIRGIPTLLLF-KNGEVAAT 104 (123)
T ss_dssp ------------T---------TTGGGGTCCBSSEEEEE-ESSSEEEE
T ss_pred ------------H---------HHHHHcCCCccCEEEEE-ECCEEEEE
Confidence 0 14567999999999999 99998753
No 198
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=98.48 E-value=6.7e-08 Score=77.72 Aligned_cols=61 Identities=15% Similarity=0.137 Sum_probs=47.8
Q ss_pred EEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeeccccccC
Q 008311 348 NVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPTLID 425 (570)
Q Consensus 348 vVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~l~D 425 (570)
+++++|||+|||+|+.+. |.++.++++ ++++++.|++ |++
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~vd~--------~~~----------------------- 44 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFG-------DKIDVEKIDI--------MVD----------------------- 44 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHC-------SSCCEEEECT--------TTC-----------------------
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhc-------CCeEEEEEEC--------CCC-----------------------
Confidence 468899999999999998 888888874 3688888875 111
Q ss_pred hHHHHHHHHhCCCCCCceEEEECCCCcE
Q 008311 426 RAVIRYVKDVWHFKNKPILVVLDPQGRV 453 (570)
Q Consensus 426 ~~~~~~L~~~y~V~~IPtlVVLDpqGkV 453 (570)
. .+.+.|+++++|++++ +|++
T Consensus 45 ~----~~~~~~~v~~~Pt~~~---~G~~ 65 (85)
T 1nho_A 45 R----EKAIEYGLMAVPAIAI---NGVV 65 (85)
T ss_dssp G----GGGGGTCSSCSSEEEE---TTTE
T ss_pred H----HHHHhCCceeeCEEEE---CCEE
Confidence 0 1456799999999998 8886
No 199
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=98.48 E-value=7.3e-08 Score=77.53 Aligned_cols=62 Identities=21% Similarity=0.248 Sum_probs=48.7
Q ss_pred CEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccccc
Q 008311 347 KNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPTLI 424 (570)
Q Consensus 347 KvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~l~ 424 (570)
++++++||++|||+|+.+. |.++.++++ ++++++.|++ |++ +
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~vd~--------~~~------------------~--- 46 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMP-------DAVEVEYINV--------MEN------------------P--- 46 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCS-------SSEEEEEEES--------SSS------------------C---
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcC-------CceEEEEEEC--------CCC------------------H---
Confidence 5789999999999999998 888888773 3688888875 110 0
Q ss_pred ChHHHHHHHHhCCCCCCceEEEECCCCcE
Q 008311 425 DRAVIRYVKDVWHFKNKPILVVLDPQGRV 453 (570)
Q Consensus 425 D~~~~~~L~~~y~V~~IPtlVVLDpqGkV 453 (570)
.+.+.|+++++|++++ +|++
T Consensus 47 ------~~~~~~~v~~~Pt~~~---~G~~ 66 (85)
T 1fo5_A 47 ------QKAMEYGIMAVPTIVI---NGDV 66 (85)
T ss_dssp ------CTTTSTTTCCSSEEEE---TTEE
T ss_pred ------HHHHHCCCcccCEEEE---CCEE
Confidence 1345689999999998 8887
No 200
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=98.47 E-value=1.1e-07 Score=94.95 Aligned_cols=91 Identities=16% Similarity=0.109 Sum_probs=62.5
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
+||+|+|+|||+||+||+... |.++++++. ++.++.|.+ +. .
T Consensus 132 ~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~--------~v~f~kVd~--------d~------~-------------- 175 (245)
T 1a0r_P 132 KITTIVVHIYEDGIKGCDALNSSLICLAAEYP--------MVKFCKIKA--------SN------T-------------- 175 (245)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT--------TSEEEEEEH--------HH------H--------------
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--------CCEEEEEeC--------Cc------H--------------
Confidence 489999999999999999998 888888763 366666653 11 0
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEccccchhHhhhcCCCCCCCchhHHHHhhhc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSPNALHMMWIWGSNAFPFTSLREEALWKEE 484 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~na~~~I~~~G~~aFPFt~~~~e~L~~e~ 484 (570)
+ +.+.|++.++||++++. +|+++.+- .... ..|.. -|+....+.++.+.
T Consensus 176 --~------l~~~~~I~~~PTll~~~-~G~~v~~~-vG~~-~~~g~--~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 176 --G------AGDRFSSDVLPTLLVYK-GGELLSNF-ISVT-EQLAE--EFFTGDVESFLNEY 224 (245)
T ss_dssp --C------CTTSSCTTTCSEEEEEE-TTEEEEEE-TTGG-GGSCT--TCCHHHHHHHHHTT
T ss_pred --H------HHHHCCCCCCCEEEEEE-CCEEEEEE-eCCc-ccccc--cccHHHHHHHHHHc
Confidence 0 23468999999998885 99987541 1111 12211 26667777777653
No 201
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.45 E-value=2.8e-06 Score=83.77 Aligned_cols=65 Identities=12% Similarity=0.023 Sum_probs=49.0
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhC---C-CCEEEEEEecCCchhhhhhccccccccccccCCC
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTA---R-IPLEMVYVGKSTKRDKCGESWQPLQLKSLVTSGK 569 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~---~-~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~~~~ 569 (570)
..|+...+.|.+. |++|++..|.+.+++.+. + .++.+..|.-+...+ +.+.+++.+.|+++++|+
T Consensus 136 ~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~-~~~~~~V~~vPt~~i~G~ 205 (243)
T 2hls_A 136 LKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPD-IADKYGVMSVPSIAINGY 205 (243)
T ss_dssp CCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHH-HHHHTTCCSSSEEEETTE
T ss_pred cCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHH-HHHHcCCeeeCeEEECCE
Confidence 3577777767666 999999999999988653 2 567777777665544 444578899999999875
No 202
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=98.42 E-value=4.5e-07 Score=71.89 Aligned_cols=60 Identities=13% Similarity=-0.030 Sum_probs=44.9
Q ss_pred EEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeeccccccCh
Q 008311 349 VLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPTLIDR 426 (570)
Q Consensus 349 VlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~l~D~ 426 (570)
+.++|||+||++|+... |.++.++++ .+++++.| | .
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~-------~~~~~~~v----------~-------------------~------ 39 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELG-------IDAEFEKI----------K-------------------E------ 39 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTT-------CCEEEEEE----------C-------------------S------
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcC-------CceEEEEe----------c-------------------C------
Confidence 45899999999999988 888887763 24555544 1 0
Q ss_pred HHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 427 AVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 427 ~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+.+.|+++++|++++ +|+++..
T Consensus 40 ---~~~~~~~~v~~~Pt~~~---~G~~~~~ 63 (77)
T 1ilo_A 40 ---MDQILEAGLTALPGLAV---DGELKIM 63 (77)
T ss_dssp ---HHHHHHHTCSSSSCEEE---TTEEEEC
T ss_pred ---HHHHHHCCCCcCCEEEE---CCEEEEc
Confidence 12456789999999998 8998765
No 203
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=98.42 E-value=1.3e-07 Score=87.14 Aligned_cols=69 Identities=12% Similarity=0.136 Sum_probs=53.8
Q ss_pred CCCEEEEEEecCC--CHHhHHHH--HHHHHHHHhhhhhccCCC-eEEEEEecccCCCCCChhhHHHHHHHHcCCCceeec
Q 008311 345 RRKNVLLLISDLD--ISQEELSI--LEQIYNESRLHLTRQESH-YEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVY 419 (570)
Q Consensus 345 kGKvVlL~FwAsW--CpPCr~e~--L~~iY~elk~~~~k~~~~-fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~ 419 (570)
.+++|+|+|||.| |+||+... |.++-+++. ++ +.|+-|++ |+
T Consensus 33 ~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~-------g~~v~~~KVdv--------De------------------ 79 (140)
T 2qgv_A 33 QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFP-------DYTWQVAIADL--------EQ------------------ 79 (140)
T ss_dssp TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCT-------TSCCEEEECCH--------HH------------------
T ss_pred CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcC-------CCeEEEEEEEC--------CC------------------
Confidence 5567899999999 99998877 888877763 24 77887764 21
Q ss_pred cccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 420 HPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 420 fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
...++.+|+|++|||++++ ++|+++.+
T Consensus 80 ---------~~~lA~~ygV~sIPTlilF-k~G~~v~~ 106 (140)
T 2qgv_A 80 ---------SEAIGDRFGAFRFPATLVF-TGGNYRGV 106 (140)
T ss_dssp ---------HHHHHHHHTCCSSSEEEEE-ETTEEEEE
T ss_pred ---------CHHHHHHcCCccCCEEEEE-ECCEEEEE
Confidence 1237788999999999999 79999865
No 204
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.40 E-value=3.6e-07 Score=97.58 Aligned_cols=67 Identities=7% Similarity=0.069 Sum_probs=52.3
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
.||+|+|+|||+||+||+.+. +.++++++++ ..++.++.|.. +.. .
T Consensus 369 ~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~-----~~~v~~~~id~--------~~~---------~---------- 416 (481)
T 3f8u_A 369 ENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSK-----DPNIVIAKMDA--------TAN---------D---------- 416 (481)
T ss_dssp TTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTT-----CSSEEEEEEET--------TSS---------C----------
T ss_pred CCCcEEEEEecCcChhHHHhhHHHHHHHHHhcc-----CCCEEEEEEEC--------Cch---------h----------
Confidence 389999999999999999999 9999999863 23566666653 110 0
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGR 452 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGk 452 (570)
+.+.|++.++|+++++++.|+
T Consensus 417 ---------~~~~~~v~~~Pt~~~~~~~~~ 437 (481)
T 3f8u_A 417 ---------VPSPYEVRGFPTIYFSPANKK 437 (481)
T ss_dssp ---------CCTTCCCCSSSEEEEECTTCT
T ss_pred ---------hHhhCCCcccCEEEEEeCCCe
Confidence 123589999999999998887
No 205
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=98.39 E-value=7.1e-07 Score=79.24 Aligned_cols=87 Identities=14% Similarity=0.054 Sum_probs=60.5
Q ss_pred CCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeeccccc
Q 008311 346 RKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPTL 423 (570)
Q Consensus 346 GKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~l 423 (570)
+++|+++|||+||+||+... |.++-+++. ++.++-|.+ |+.
T Consensus 23 ~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~--------~v~f~kvd~--------d~~--------------------- 65 (118)
T 3evi_A 23 DVWVIIHLYRSSIPMCLLVNQHLSLLARKFP--------ETKFVKAIV--------NSC--------------------- 65 (118)
T ss_dssp TCEEEEEEECTTSHHHHHHHHHHHHHHHHCT--------TSEEEEEEG--------GGT---------------------
T ss_pred CCeEEEEEeCCCChHHHHHHHHHHHHHHHCC--------CCEEEEEEh--------HHh---------------------
Confidence 45999999999999999987 777766652 466666653 210
Q ss_pred cChHHHHHHHHhCCCCCCceEEEECCCCcEEccccchhHhhhcCCCCCCCchhHHHHhhh
Q 008311 424 IDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSPNALHMMWIWGSNAFPFTSLREEALWKE 483 (570)
Q Consensus 424 ~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~na~~~I~~~G~~aFPFt~~~~e~L~~e 483 (570)
.+.|+++++||++++ ++|+.+.+-. . ....|.. -|+....|..+.+
T Consensus 66 ---------~~~~~v~~~PT~~~f-k~G~~v~~~~-G-~~~~gg~--~~~~~~le~~L~~ 111 (118)
T 3evi_A 66 ---------IQHYHDNCLPTIFVY-KNGQIEAKFI-G-IIECGGI--NLKLEELEWKLAE 111 (118)
T ss_dssp ---------STTCCGGGCSEEEEE-ETTEEEEEEE-S-TTTTTCS--SCCHHHHHHHHHT
T ss_pred ---------HHHCCCCCCCEEEEE-ECCEEEEEEe-C-hhhhCCC--CCCHHHHHHHHHH
Confidence 134889999999988 5898886521 1 1123433 5888888877765
No 206
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=97.75 E-value=3.9e-08 Score=81.50 Aligned_cols=68 Identities=19% Similarity=0.259 Sum_probs=51.5
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
.||+|+++||++|||+|+.+. +.++.++++ .++.++.|++ |..
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--------~~~-------------------- 62 (106)
T 2yj7_A 18 SDKPVLVDFWAPWCGPCRMIAPIIEELAKEYE-------GKVKVVKVNV--------DEN-------------------- 62 (106)
Confidence 579999999999999999988 888887774 2455665553 110
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVS 455 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~ 455 (570)
..+.+.|++.++|+++++ ++|+++.
T Consensus 63 -------~~~~~~~~v~~~Pt~~~~-~~g~~~~ 87 (106)
T 2yj7_A 63 -------PNTAAQYGIRSIPTLLLF-KNGQVVD 87 (106)
Confidence 124566899999999999 8998864
No 207
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=98.37 E-value=1.1e-08 Score=88.88 Aligned_cols=34 Identities=6% Similarity=-0.097 Sum_probs=27.7
Q ss_pred CeeeccccCCCEEEEEEecCCCHHhHHHH--HHHHH
Q 008311 337 RRVNIEVLRRKNVLLLISDLDISQEELSI--LEQIY 370 (570)
Q Consensus 337 ~~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY 370 (570)
+.++++..+||.++++|||+|||||+.+. |.++.
T Consensus 3 ~~~~la~~~~k~~vV~F~A~WC~~C~~~~p~~~~~a 38 (106)
T 3kp8_A 3 LAVGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAF 38 (106)
T ss_dssp HHHHHHHHHHHHTCEEEECTTCHHHHHHHHHHGGGG
T ss_pred HhhHHHHhcCCCEEEEEECCCCHHHHHHHHHHHHHH
Confidence 34667778899999999999999999986 55444
No 208
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=98.35 E-value=4.8e-08 Score=87.35 Aligned_cols=74 Identities=12% Similarity=0.078 Sum_probs=49.1
Q ss_pred cCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeeccc
Q 008311 344 LRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHP 421 (570)
Q Consensus 344 LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP 421 (570)
-+.+.++|+|||.||++|+.+- +...|+.... ...+.|+.|.+.+ + .| +
T Consensus 16 ~~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~-----~~~~~l~~vdv~~--------~----------~~------~ 66 (116)
T 3dml_A 16 DKAELRLLMFEQPGCLYCARWDAEIAPQYPLTDE-----GRAAPVQRLQMRD--------P----------LP------P 66 (116)
T ss_dssp ---CEEEEEEECTTCHHHHHHHHHTTTTGGGSHH-----HHHSCEEEEETTS--------C----------CC------T
T ss_pred ccCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhh-----cccceEEEEECCC--------C----------Cc------h
Confidence 3557899999999999999876 3334432210 1247788888611 1 00 0
Q ss_pred cccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 422 TLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 422 ~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
+ ++..|+|.++||+++++ +|+.+.+
T Consensus 67 ---~------la~~~~V~g~PT~i~f~-~G~ev~R 91 (116)
T 3dml_A 67 ---G------LELARPVTFTPTFVLMA-GDVESGR 91 (116)
T ss_dssp ---T------CBCSSCCCSSSEEEEEE-TTEEEEE
T ss_pred ---h------HHHHCCCCCCCEEEEEE-CCEEEee
Confidence 1 33458899999999999 9999874
No 209
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=98.34 E-value=1.5e-06 Score=77.21 Aligned_cols=70 Identities=14% Similarity=0.227 Sum_probs=54.4
Q ss_pred CCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeeccccc
Q 008311 346 RKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPTL 423 (570)
Q Consensus 346 GKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~l 423 (570)
+|+|+++|+|+|||||+.-. +.++.++ . ++.++.|.+ |+.+
T Consensus 24 ~~~vvi~khatwCgpc~~~~~~~e~~~~~-~--------~v~~~~vdV--------de~r-------------------- 66 (112)
T 3iv4_A 24 NKYVFVLKHSETCPISANAYDQFNKFLYE-R--------DMDGYYLIV--------QQER-------------------- 66 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHH-H--------TCCEEEEEG--------GGGH--------------------
T ss_pred CCCEEEEEECCcCHhHHHHHHHHHHHhcc-C--------CceEEEEEe--------ecCc--------------------
Confidence 78999999999999999887 7777763 1 477888875 2111
Q ss_pred cChHHHHHHHHhCCCCC-CceEEEECCCCcEEcc
Q 008311 424 IDRAVIRYVKDVWHFKN-KPILVVLDPQGRVVSP 456 (570)
Q Consensus 424 ~D~~~~~~L~~~y~V~~-IPtlVVLDpqGkVv~~ 456 (570)
+.-..+++.|+|++ .|+++++ ++|+++..
T Consensus 67 ---~~Sn~IA~~~~V~h~sPq~il~-k~G~~v~~ 96 (112)
T 3iv4_A 67 ---DLSDYIAKKTNVKHESPQAFYF-VNGEMVWN 96 (112)
T ss_dssp ---HHHHHHHHHHTCCCCSSEEEEE-ETTEEEEE
T ss_pred ---hhhHHHHHHhCCccCCCeEEEE-ECCEEEEE
Confidence 12245889999995 9999999 89999875
No 210
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=98.34 E-value=2.9e-08 Score=86.28 Aligned_cols=68 Identities=9% Similarity=0.113 Sum_probs=51.4
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
+||+|+|+||++||++|+.+. |.+++++++ ++.++.|++ |..
T Consensus 35 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--------~v~~~~v~~--------~~~-------------------- 78 (130)
T 1wmj_A 35 AGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--------GAVFLKVDV--------DEL-------------------- 78 (130)
T ss_dssp TTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--------TBCCEECCT--------TTS--------------------
T ss_pred cCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--------CCEEEEEec--------cch--------------------
Confidence 589999999999999999988 888877763 466666653 110
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+.+.|++.++|+++++ ++|+++.+
T Consensus 79 -------~~~~~~~~v~~~Pt~~~~-~~g~~~~~ 104 (130)
T 1wmj_A 79 -------KEVAEKYNVEAMPTFLFI-KDGAEADK 104 (130)
T ss_dssp -------GGGHHHHTCCSSCCCCBC-TTTTCCBC
T ss_pred -------HHHHHHcCCCccceEEEE-eCCeEEEE
Confidence 124567899999998777 89988653
No 211
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.30 E-value=1.3e-06 Score=86.08 Aligned_cols=71 Identities=10% Similarity=0.058 Sum_probs=52.9
Q ss_pred ccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecc
Q 008311 343 VLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYH 420 (570)
Q Consensus 343 ~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~f 420 (570)
+++|++++++|||+|||+|+... |.+++.+++. +...++.+..|.+ +. +
T Consensus 135 ~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~---~~~~~v~~~~vd~--------~~------------------~ 185 (243)
T 2hls_A 135 SLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWK---QGNPVILSEAVEA--------YE------------------N 185 (243)
T ss_dssp HCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHH---TTCCCEEEEEEET--------TT------------------C
T ss_pred HcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHccc---ccCCcEEEEEEEC--------cc------------------C
Confidence 46799999999999999999998 8888888741 1114677777654 11 1
Q ss_pred ccccChHHHHHHHHhCCCCCCceEEEECCCCcEE
Q 008311 421 PTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVV 454 (570)
Q Consensus 421 P~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv 454 (570)
..+.+.|+|+++|++++ +|+++
T Consensus 186 ---------~~~~~~~~V~~vPt~~i---~G~~~ 207 (243)
T 2hls_A 186 ---------PDIADKYGVMSVPSIAI---NGYLV 207 (243)
T ss_dssp ---------HHHHHHTTCCSSSEEEE---TTEEE
T ss_pred ---------HHHHHHcCCeeeCeEEE---CCEEE
Confidence 12556799999999988 78865
No 212
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=98.29 E-value=3.4e-07 Score=89.38 Aligned_cols=90 Identities=17% Similarity=0.165 Sum_probs=60.4
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
+||+|+|+|||+||++|+... |.++.+++. ++.++.|.+ + ..
T Consensus 119 ~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~--------~v~f~~vd~--------~------~~-------------- 162 (217)
T 2trc_P 119 KVTTIVVNIYEDGVRGCDALNSSLECLAAEYP--------MVKFCKIRA--------S------NT-------------- 162 (217)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT--------TSEEEEEEH--------H------HH--------------
T ss_pred CCcEEEEEEECCCCccHHHHHHHHHHHHHHCC--------CeEEEEEEC--------C------cH--------------
Confidence 469999999999999999988 777766552 466666653 1 00
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEccccchhHhhhcCCCCCCCchhHHHHhhh
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSPNALHMMWIWGSNAFPFTSLREEALWKE 483 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~na~~~I~~~G~~aFPFt~~~~e~L~~e 483 (570)
.+.+.|++.++|+++++. +|+++.+- .......| . -|+....+.++.+
T Consensus 163 --------~l~~~~~i~~~PTl~~~~-~G~~v~~~-~G~~~~~g-~--~~~~~~Le~~L~~ 210 (217)
T 2trc_P 163 --------GAGDRFSSDVLPTLLVYK-GGELISNF-ISVAEQFA-E--DFFAADVESFLNE 210 (217)
T ss_dssp --------TCSTTSCGGGCSEEEEEE-TTEEEEEE-TTGGGGSC-S--SCCHHHHHHHHHT
T ss_pred --------HHHHHCCCCCCCEEEEEE-CCEEEEEE-eCCcccCc-c--cCCHHHHHHHHHH
Confidence 023458999999999995 99987531 12122222 2 3666667776654
No 213
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=98.25 E-value=6.9e-06 Score=85.72 Aligned_cols=74 Identities=9% Similarity=0.114 Sum_probs=53.6
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
++|+|+|+|||+||++|+... +.++.+++++... .+.++.++.|.. +.
T Consensus 21 ~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~-~~~~v~~~~Vd~--------~~--------------------- 70 (382)
T 2r2j_A 21 NADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFP-NENQVVFARVDC--------DQ--------------------- 70 (382)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC----CCEEEEEEET--------TT---------------------
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcC-CCCceEEEEEEC--------Cc---------------------
Confidence 579999999999999999998 9999998853100 012466666553 10
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEEc
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVS 455 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~ 455 (570)
+ ..+.++|+|+++|+++++ ++|+++.
T Consensus 71 --~----~~l~~~~~v~~~Pt~~~f-~~G~~~~ 96 (382)
T 2r2j_A 71 --H----SDIAQRYRISKYPTLKLF-RNGMMMK 96 (382)
T ss_dssp --C----HHHHHHTTCCEESEEEEE-ETTEEEE
T ss_pred --c----HHHHHhcCCCcCCEEEEE-eCCcEee
Confidence 1 236778999999999877 5788764
No 214
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=98.25 E-value=1.4e-06 Score=83.27 Aligned_cols=101 Identities=12% Similarity=0.123 Sum_probs=73.8
Q ss_pred Ceeeccc-cCCCEEEEE-EecCCCHHhH-HHH--HHHHHHHH-hhhhhccCCCeE-EEEEecccCCCCCChhhHHHHHHH
Q 008311 337 RRVNIEV-LRRKNVLLL-ISDLDISQEE-LSI--LEQIYNES-RLHLTRQESHYE-VVWIPIVDHFIHWDDPTQKKFETL 409 (570)
Q Consensus 337 ~~Vsls~-LkGKvVlL~-FwAsWCpPCr-~e~--L~~iY~el-k~~~~k~~~~fE-IV~IsIvD~s~~w~D~~~~~F~~~ 409 (570)
+.+++++ ++||.|+|+ |.+.|||.|- .++ +.+.|.++ ++ .+.+ |+.||. | +....+.|.+.
T Consensus 33 ~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~------~g~~~V~gvS~-D-----~~~~~~~~~~~ 100 (182)
T 1xiy_A 33 TSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKE------NNFDDIYCITN-N-----DIYVLKSWFKS 100 (182)
T ss_dssp EEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTT------SCCSEEEEEES-S-----CHHHHHHHHHH
T ss_pred eeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHh------CCCcEEEEEeC-C-----CHHHHHHHHHH
Confidence 7999998 699876665 5677999999 888 99999999 73 3684 999996 3 34455677653
Q ss_pred HcCCCceeeccccccChHHHHHHHHhCCCC------C-----CceEEEECCCCcEEccc
Q 008311 410 QSSMPWYTVYHPTLIDRAVIRYVKDVWHFK------N-----KPILVVLDPQGRVVSPN 457 (570)
Q Consensus 410 ~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~------~-----IPtlVVLDpqGkVv~~n 457 (570)
. ... +||.+.|. ...+.+.||+. | ...++||| +|+|+...
T Consensus 101 ~-~~~----~f~lLsD~--~~~~a~~yGv~~~~~~~G~g~~~~R~tfvId-dG~V~~~~ 151 (182)
T 1xiy_A 101 M-DIK----KIKYISDG--NSSFTDSMNMLVDKSNFFMGMRPWRFVAIVE-NNILVKMF 151 (182)
T ss_dssp T-TCC----SSEEEECT--TSHHHHHTTCEEECGGGTCCEEECCEEEEEE-TTEEEEEE
T ss_pred c-CCC----CceEEEeC--chHHHHHhCCceeccccCCCCceEEEEEEEc-CCEEEEEE
Confidence 2 221 46666675 35688889873 2 46789999 99998763
No 215
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=98.22 E-value=7.6e-07 Score=81.30 Aligned_cols=67 Identities=12% Similarity=0.242 Sum_probs=43.7
Q ss_pred CCEEEEEEecCC--CHHhHHHH--HHHHHHHHhhhhhccCCCeE--EEEEecccCCCCCChhhHHHHHHHHcCCCceeec
Q 008311 346 RKNVLLLISDLD--ISQEELSI--LEQIYNESRLHLTRQESHYE--VVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVY 419 (570)
Q Consensus 346 GKvVlL~FwAsW--CpPCr~e~--L~~iY~elk~~~~k~~~~fE--IV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~ 419 (570)
++.++++|||.| |+||+... |.++++++ + ++. ++.|++ |+
T Consensus 34 ~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~-------~v~~~~~~Vd~--------d~------------------ 79 (142)
T 2es7_A 34 VGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P-------QFDWQVAVADL--------EQ------------------ 79 (142)
T ss_dssp CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T-------TSCCEEEEECH--------HH------------------
T ss_pred CCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c-------ccceeEEEEEC--------CC------------------
Confidence 345788899988 99999988 88888766 2 355 777753 21
Q ss_pred cccccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 420 HPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 420 fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
...+.++|+|+++||++++ ++|+++.+
T Consensus 80 ---------~~~la~~~~V~~iPT~~~f-k~G~~v~~ 106 (142)
T 2es7_A 80 ---------SEAIGDRFNVRRFPATLVF-TDGKLRGA 106 (142)
T ss_dssp ---------HHHHHHTTTCCSSSEEEEE-SCC----C
T ss_pred ---------CHHHHHhcCCCcCCeEEEE-eCCEEEEE
Confidence 1236778999999999999 89998754
No 216
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=98.20 E-value=1.4e-06 Score=94.73 Aligned_cols=70 Identities=6% Similarity=-0.006 Sum_probs=53.0
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccC----CCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceee
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQE----SHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTV 418 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~----~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV 418 (570)
++|+|+|+|||+||+||+.+. +.++++++++. .+ +++.++-|.+ |+.
T Consensus 41 ~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~---~g~~~~~~v~f~~VD~--------d~~---------------- 93 (470)
T 3qcp_A 41 PLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVE---HGKDALQIATAAAVNC--------ASE---------------- 93 (470)
T ss_dssp GGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCS---SCSSGGGGCEEEEEET--------TTC----------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhh---cccccCceEEEEEEEC--------CCC----------------
Confidence 348999999999999999999 99999888531 11 1477777764 211
Q ss_pred ccccccChHHHHHHHHhCCCCCCceEEEECCCCc
Q 008311 419 YHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGR 452 (570)
Q Consensus 419 ~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGk 452 (570)
..+.+.|+|+++|+++++++.|.
T Consensus 94 -----------~~la~~y~V~~~PTlilf~~gg~ 116 (470)
T 3qcp_A 94 -----------VDLCRKYDINFVPRLFFFYPRDS 116 (470)
T ss_dssp -----------HHHHHHTTCCSSCEEEEEEESSC
T ss_pred -----------HHHHHHcCCCccCeEEEEECCCc
Confidence 13667899999999999987664
No 217
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=98.16 E-value=2.6e-06 Score=80.76 Aligned_cols=102 Identities=12% Similarity=0.148 Sum_probs=74.3
Q ss_pred Ceeeccc-cCCCEEEEEEe-cCCCHHhHHHH--HHHHHHHHhhhhhccCCCeE-EEEEecccCCCCCChhhHHHHHHHHc
Q 008311 337 RRVNIEV-LRRKNVLLLIS-DLDISQEELSI--LEQIYNESRLHLTRQESHYE-VVWIPIVDHFIHWDDPTQKKFETLQS 411 (570)
Q Consensus 337 ~~Vsls~-LkGKvVlL~Fw-AsWCpPCr~e~--L~~iY~elk~~~~k~~~~fE-IV~IsIvD~s~~w~D~~~~~F~~~~~ 411 (570)
+++++++ ++||.|+|+|. +.|||.|..++ +.+.|.++++ .+.+ |+.||. | +....++|.+...
T Consensus 32 ~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~------~gv~~VigIS~-D-----~~~~~~~w~~~~~ 99 (171)
T 2xhf_A 32 KSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKE------EGYHTIACIAV-N-----DPFVMAAWGKTVD 99 (171)
T ss_dssp CEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHH------TTCCEEEEEES-S-----CHHHHHHHHHHHC
T ss_pred cEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHH------CCCCEEEEEeC-C-----CHHHHHHHHHhcC
Confidence 8999999 59998777765 46899999999 9999999974 3685 999996 3 3445677765322
Q ss_pred CCCceeeccccccChHHHHHHHHhCCCC-----------CCceEEEECCCCcEEccc
Q 008311 412 SMPWYTVYHPTLIDRAVIRYVKDVWHFK-----------NKPILVVLDPQGRVVSPN 457 (570)
Q Consensus 412 ~MPW~aV~fP~l~D~~~~~~L~~~y~V~-----------~IPtlVVLDpqGkVv~~n 457 (570)
.. .+||.+.|. ...+.+.||+. ..-.++||| +|+|+...
T Consensus 100 -~~---~~f~lLSD~--~~~~a~ayGv~~~~~~~g~g~~~~R~tfvId-dG~V~~~~ 149 (171)
T 2xhf_A 100 -PE---HKIRMLADM--HGEFTRALGTELDSSKMLGNNRSRRYAMLID-DNKIRSVS 149 (171)
T ss_dssp -TT---CCSEEEECT--TSHHHHHHTCBCCCHHHHSSCCBCCEEEEEE-TTEEEEEE
T ss_pred -CC---CCeEEEEeC--CchHHHHhCCceeccccCCCcceEEEEEEEe-CCEEEEEE
Confidence 20 146666675 35678888863 235678998 99998753
No 218
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.15 E-value=9e-06 Score=86.74 Aligned_cols=67 Identities=7% Similarity=-0.008 Sum_probs=51.5
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
+|++|+|+|||+||++|+.+. +.++.+++++ .+.++.|.. +..
T Consensus 20 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~-------~v~~~~vd~--------~~~-------------------- 64 (481)
T 3f8u_A 20 SAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKG-------IVPLAKVDC--------TAN-------------------- 64 (481)
T ss_dssp SSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-------TCCEEEEET--------TTC--------------------
T ss_pred CCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcC-------ceEEEEEEC--------CCC--------------------
Confidence 448999999999999999998 9999988852 355666653 110
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcEE
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRVV 454 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv 454 (570)
..+.++|+|+++|+++++ ++|+++
T Consensus 65 -------~~l~~~~~v~~~Ptl~~~-~~g~~~ 88 (481)
T 3f8u_A 65 -------TNTCNKYGVSGYPTLKIF-RDGEEA 88 (481)
T ss_dssp -------HHHHHHTTCCEESEEEEE-ETTEEE
T ss_pred -------HHHHHhcCCCCCCEEEEE-eCCcee
Confidence 236778999999999988 677654
No 219
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.15 E-value=3.7e-06 Score=80.64 Aligned_cols=63 Identities=6% Similarity=-0.022 Sum_probs=47.7
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
.+++++++|||+||++|+.+. +.++.+++ .++.++.|.+ +. +
T Consensus 135 ~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~--------~~v~~~~vd~--------~~------------------~-- 178 (229)
T 2ywm_A 135 DIPIEIWVFVTTSCGYCPSAAVMAWDFALAN--------DYITSKVIDA--------SE------------------N-- 178 (229)
T ss_dssp CSCEEEEEEECTTCTTHHHHHHHHHHHHHHC--------TTEEEEEEEG--------GG------------------C--
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHC--------CCeEEEEEEC--------CC------------------C--
Confidence 456779999999999999998 77777665 2577777764 21 1
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcE
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRV 453 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkV 453 (570)
..+.+.|+++++|++++ +|++
T Consensus 179 -------~~l~~~~~v~~~Pt~~~---~G~~ 199 (229)
T 2ywm_A 179 -------QDLAEQFQVVGVPKIVI---NKGV 199 (229)
T ss_dssp -------HHHHHHTTCCSSSEEEE---GGGT
T ss_pred -------HHHHHHcCCcccCEEEE---CCEE
Confidence 12667899999999998 7774
No 220
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=98.12 E-value=3.9e-06 Score=86.08 Aligned_cols=64 Identities=8% Similarity=0.059 Sum_probs=48.4
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
.||+|+|+|||+||++|+.+. +.++.+++++ ..++.++.|.. +..
T Consensus 266 ~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~-----~~~v~~~~vd~--------~~~-------------------- 312 (361)
T 3uem_A 266 EKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKD-----HENIVIAKMDS--------TAN-------------------- 312 (361)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-----CSSEEEEEEET--------TTC--------------------
T ss_pred CCCcEEEEEecCcCHhHHHHHHHHHHHHHHhcc-----CCcEEEEEEEC--------Ccc--------------------
Confidence 689999999999999999998 9999998863 23465555542 110
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCC
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQ 450 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpq 450 (570)
+ .+.|+|+++|+++++++.
T Consensus 313 --~-------~~~~~v~~~Pt~~~~~~~ 331 (361)
T 3uem_A 313 --E-------VEAVKVHSFPTLKFFPAS 331 (361)
T ss_dssp --B-------CSSCCCCSSSEEEEECSS
T ss_pred --c-------hhhcCCcccCeEEEEECC
Confidence 0 124799999999999765
No 221
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=98.06 E-value=1.3e-05 Score=76.67 Aligned_cols=72 Identities=14% Similarity=0.075 Sum_probs=50.9
Q ss_pred CCCEEEEEEec-------CCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCc
Q 008311 345 RRKNVLLLISD-------LDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPW 415 (570)
Q Consensus 345 kGKvVlL~FwA-------sWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW 415 (570)
++.+|+++||| .||+||+.+. +.++-++++.+. .++++.|+-|.+ |+
T Consensus 36 ~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~--~~~~v~f~kvD~--------d~-------------- 91 (178)
T 3ga4_A 36 PGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQA--PQSLNLFFTVDV--------NE-------------- 91 (178)
T ss_dssp TTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHC--TTCCEEEEEEET--------TT--------------
T ss_pred CCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhcc--CCCCEEEEEEEC--------cc--------------
Confidence 45689999999 4999999998 888888875211 113454554442 21
Q ss_pred eeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcE
Q 008311 416 YTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRV 453 (570)
Q Consensus 416 ~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkV 453 (570)
...+.++|+|+++|+++++.+.|..
T Consensus 92 -------------~~~la~~~~I~siPtl~~F~~g~~~ 116 (178)
T 3ga4_A 92 -------------VPQLVKDLKLQNVPHLVVYPPAESN 116 (178)
T ss_dssp -------------CHHHHHHTTCCSSCEEEEECCCCGG
T ss_pred -------------CHHHHHHcCCCCCCEEEEEcCCCCC
Confidence 1236778999999999999876644
No 222
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.06 E-value=1.9e-05 Score=76.30 Aligned_cols=98 Identities=13% Similarity=0.123 Sum_probs=55.6
Q ss_pred eccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChh------------hHHH
Q 008311 340 NIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDP------------TQKK 405 (570)
Q Consensus 340 sls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~------------~~~~ 405 (570)
.+..-+||++++.||+.|||+|+.+. |.++.++ ++.|+++.+ .......+. ..+.
T Consensus 80 ~~g~~~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~----------~v~v~~~~~-p~~~~~~~s~~~a~a~~~a~d~~~~ 148 (216)
T 1eej_A 80 VYKAPQEKHVITVFTDITCGYCHKLHEQMADYNAL----------GITVRYLAF-PRQGLDSDAEKEMKAIWCAKDKNKA 148 (216)
T ss_dssp EECCTTCCEEEEEEECTTCHHHHHHHTTHHHHHHT----------TEEEEEEEC-CTTCSSSHHHHHHHHHHTSSSHHHH
T ss_pred eecCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhC----------CcEEEEEEC-CccCCCchHHHHHHHHHhccCHHHH
Confidence 33445789999999999999999998 7776431 466776643 110000111 1123
Q ss_pred HHHHHcCCCceeeccccc-cChHHHHHHHHhCCCCCCceEEEECCCCcE
Q 008311 406 FETLQSSMPWYTVYHPTL-IDRAVIRYVKDVWHFKNKPILVVLDPQGRV 453 (570)
Q Consensus 406 F~~~~~~MPW~aV~fP~l-~D~~~~~~L~~~y~V~~IPtlVVLDpqGkV 453 (570)
|.+.....+ ++++.. ...+....+.+.|||++.|++++.| |+.
T Consensus 149 ~~~~~~~~~---~~~~~~~~~v~~~~~l~~~~gV~gtPt~v~~d--G~~ 192 (216)
T 1eej_A 149 FDDVMAGKS---VAPASCDVDIADHYALGVQLGVSGTPAVVLSN--GTL 192 (216)
T ss_dssp HHHHHTTCC---CCCCCCSCCHHHHHHHHHHHTCCSSSEEECTT--SCE
T ss_pred HHHHHhCCC---CChhHHHHHHHHHHHHHHHcCCCccCEEEEcC--CeE
Confidence 443322211 111110 1122345688899999999986644 543
No 223
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.05 E-value=8.5e-06 Score=75.75 Aligned_cols=71 Identities=17% Similarity=0.210 Sum_probs=48.9
Q ss_pred CCCEEEEEEecCCCHHhHHHH---H--HHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeec
Q 008311 345 RRKNVLLLISDLDISQEELSI---L--EQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVY 419 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~---L--~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~ 419 (570)
.||+|+|+|+|.||++|+.+- + .++.+.+++ +|..|-+.+ ++.
T Consensus 41 ~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~-------~fv~v~~d~-------~~~------------------ 88 (153)
T 2dlx_A 41 QNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE-------HFIFWQVYH-------DSE------------------ 88 (153)
T ss_dssp HTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH-------TEEEEEEES-------SSH------------------
T ss_pred cCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc-------CeEEEEEec-------CCH------------------
Confidence 489999999999999999874 1 344444432 354444432 110
Q ss_pred cccccChHHHHHHHHhCCCCCCceEEEECCC-CcEEc
Q 008311 420 HPTLIDRAVIRYVKDVWHFKNKPILVVLDPQ-GRVVS 455 (570)
Q Consensus 420 fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpq-GkVv~ 455 (570)
+ ...+.+.|++.+.|+++++|++ |+.+.
T Consensus 89 -------~-~~~l~~~y~v~~~P~~~fld~~~G~~l~ 117 (153)
T 2dlx_A 89 -------E-GQRYIQFYKLGDFPYVSILDPRTGQKLV 117 (153)
T ss_dssp -------H-HHHHHHHHTCCSSSEEEEECTTTCCCCE
T ss_pred -------h-HHHHHHHcCCCCCCEEEEEeCCCCcEee
Confidence 1 1245678999999999999998 87654
No 224
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.03 E-value=1.9e-05 Score=81.14 Aligned_cols=67 Identities=15% Similarity=0.157 Sum_probs=46.5
Q ss_pred CCCEEEEEEecCCCHHhHHHH---------HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCc
Q 008311 345 RRKNVLLLISDLDISQEELSI---------LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPW 415 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~---------L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW 415 (570)
++++|+|+|||+||+ |+.+. +.++.++++ +.++.++-|.. +..
T Consensus 27 ~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~------~~~v~~~~Vd~--------~~~------------- 78 (350)
T 1sji_A 27 KYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLE------HKDIGFVMVDA--------KKE------------- 78 (350)
T ss_dssp TCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGG------GSSEEEEEEET--------TTT-------------
T ss_pred hCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHh------hcCcEEEEEeC--------CCC-------------
Confidence 579999999999999 96442 344444443 12566666653 111
Q ss_pred eeeccccccChHHHHHHHHhCCCCCCceEEEECCCCcEE
Q 008311 416 YTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVV 454 (570)
Q Consensus 416 ~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv 454 (570)
..+.++|+|+++||++++ ++|++.
T Consensus 79 --------------~~l~~~~~v~~~Pt~~~~-~~g~~~ 102 (350)
T 1sji_A 79 --------------AKLAKKLGFDEEGSLYVL-KGDRTI 102 (350)
T ss_dssp --------------HHHHHHHTCCSTTEEEEE-ETTEEE
T ss_pred --------------HHHHHhcCCCccceEEEE-ECCcEE
Confidence 136778999999999999 778854
No 225
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.00 E-value=1.4e-05 Score=85.91 Aligned_cols=59 Identities=7% Similarity=0.034 Sum_probs=45.3
Q ss_pred CCeEEEEEecCC-CchHHHHHHHHHHHHhhC---CCCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 505 EGKYIFLYGGDD-VEWVRKFTTAARSVANTA---RIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 505 egk~I~lYfgad-~~w~r~FT~~l~~vy~~~---~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
.+|.+.++|.+. |++|+.+.|.+.+++++. +.++-++.|..+.. ...+ +++-++||+++
T Consensus 375 ~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~--~~~~-~~v~~~Pt~~~ 437 (504)
T 2b5e_A 375 PKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTEN--DVRG-VVIEGYPTIVL 437 (504)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGC--CCSS-CCCSSSSEEEE
T ss_pred CCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCcc--cccc-CCceecCeEEE
Confidence 588999999999 999999999999998752 34666666655443 3444 88889999875
No 226
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=97.96 E-value=7.9e-06 Score=70.00 Aligned_cols=69 Identities=12% Similarity=0.062 Sum_probs=41.7
Q ss_pred CCCEEEEEEecCCCHHhHHHHHHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccccc
Q 008311 345 RRKNVLLLISDLDISQEELSILEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPTLI 424 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~l~ 424 (570)
+++.|++ |||+|||+|+... .+.+++. ..|+++-|.. +....
T Consensus 18 ~~~~vv~-f~a~~C~~C~~~~--~~l~~~~-------~~~~~v~v~~--------~~~~~-------------------- 59 (116)
T 2e7p_A 18 SSAPVVV-FSKTYCGYCNRVK--QLLTQVG-------ASYKVVELDE--------LSDGS-------------------- 59 (116)
T ss_dssp TSSSEEE-EECTTCHHHHHHH--HHHHHHT-------CCCEEEEGGG--------STTHH--------------------
T ss_pred cCCCEEE-EECCCChhHHHHH--HHHHHcC-------CCeEEEEccC--------CCChH--------------------
Confidence 4566666 9999999999876 2223332 2354443321 11111
Q ss_pred ChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 425 DRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 425 D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
+....+.+.|++.++|++ ++ +|+++..
T Consensus 60 --~~~~~l~~~~~v~~~Pt~-~~--~g~~v~~ 86 (116)
T 2e7p_A 60 --QLQSALAHWTGRGTVPNV-FI--GGKQIGG 86 (116)
T ss_dssp --HHHHHHHHHHSCCSSCEE-EE--TTEEEEC
T ss_pred --HHHHHHHHHhCCCCcCEE-EE--CCEEECC
Confidence 112347778999999999 44 6887753
No 227
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=97.91 E-value=9.4e-06 Score=87.34 Aligned_cols=67 Identities=16% Similarity=0.194 Sum_probs=48.7
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
.||+|+|+|||+||+||+.+. +.++.++++. .+.++.++.|.. +. .
T Consensus 375 ~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~----~~~~v~~~~vd~--------~~---------~----------- 422 (504)
T 2b5e_A 375 PKKDVLVLYYAPWCGHCKRLAPTYQELADTYAN----ATSDVLIAKLDH--------TE---------N----------- 422 (504)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHH----HCSSCEEEEEEG--------GG---------C-----------
T ss_pred CCCCEEEEEECCCChhHHHHhHHHHHHHHHhhc----cCCcEEEEEecC--------Cc---------c-----------
Confidence 489999999999999999999 9999988862 123455555542 10 0
Q ss_pred ccChHHHHHHHHhCCCCCCceEEEECCCCcE
Q 008311 423 LIDRAVIRYVKDVWHFKNKPILVVLDPQGRV 453 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkV 453 (570)
+ +.. |+++++||++++ ++|+.
T Consensus 423 --~------~~~-~~v~~~Pt~~~~-~~G~~ 443 (504)
T 2b5e_A 423 --D------VRG-VVIEGYPTIVLY-PGGKK 443 (504)
T ss_dssp --C------CSS-CCCSSSSEEEEE-CCTTS
T ss_pred --c------ccc-CCceecCeEEEE-eCCce
Confidence 1 112 789999999999 78865
No 228
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=97.88 E-value=8.1e-05 Score=68.36 Aligned_cols=35 Identities=3% Similarity=0.006 Sum_probs=29.8
Q ss_pred eeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHH
Q 008311 339 VNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNES 373 (570)
Q Consensus 339 Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~el 373 (570)
..+..-.||++++.||+.|||+|+.+. |.++++++
T Consensus 15 ~~~G~~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~ 51 (175)
T 3gyk_A 15 PVLGNPEGDVTVVEFFDYNCPYCRRAMAEVQGLVDAD 51 (175)
T ss_dssp CEEECTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHC
T ss_pred CCcCCCCCCEEEEEEECCCCccHHHHHHHHHHHHHhC
Confidence 345566899999999999999999999 88888765
No 229
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.61 E-value=0.00021 Score=66.95 Aligned_cols=41 Identities=12% Similarity=0.010 Sum_probs=34.3
Q ss_pred cCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEec
Q 008311 344 LRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPI 391 (570)
Q Consensus 344 LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsI 391 (570)
-.||++++.||+.|||+|+.+. |.++.+++. ++++++.+|+
T Consensus 23 ~~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~-------~~v~~~~~~~ 65 (195)
T 3hd5_A 23 TPGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAP-------QDVVLKQVPI 65 (195)
T ss_dssp STTCEEEEEEECTTCHHHHHHHHHHHHHHHTCC-------TTEEEEEEEC
T ss_pred CCCCeEEEEEECCCCccHHHhhHHHHHHHHHCC-------CCeEEEEEec
Confidence 4689999999999999999998 777766653 3688999997
No 230
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=97.53 E-value=0.0004 Score=66.84 Aligned_cols=92 Identities=11% Similarity=0.046 Sum_probs=51.4
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChh------------hHHHHHHHH
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDP------------TQKKFETLQ 410 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~------------~~~~F~~~~ 410 (570)
.||++++.||+.|||+|+.+. |.++ .+ .++.|+++.+ .......+. ..+.|.+.+
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~-~~---------~~v~v~~~~~-p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~ 153 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEY-ND---------LGITVRYLAF-PRAGMNNQTAKQMEAIWTAKDPVFALNEAE 153 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHH-HH---------TTEEEEEEEC-CSSTTCSHHHHHHHHHHHSSSHHHHHHHHH
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHH-Hh---------CCcEEEEEEC-CccCCCchHHHHHHHHHhCcCHHHHHHHHH
Confidence 579999999999999999998 7763 22 1366666532 100000111 112233322
Q ss_pred cCCCceeeccccc-cChHHHHHHHHhCCCCCCceEEEECCCCc
Q 008311 411 SSMPWYTVYHPTL-IDRAVIRYVKDVWHFKNKPILVVLDPQGR 452 (570)
Q Consensus 411 ~~MPW~aV~fP~l-~D~~~~~~L~~~y~V~~IPtlVVLDpqGk 452 (570)
..-+ ++.... ...+....+.+.+||+|.|++++ .+|+
T Consensus 154 ~~~~---~~~~~~~~~v~~~~~l~~~~gV~gTPt~vi--~nG~ 191 (211)
T 1t3b_A 154 KGNL---PKEVKTPNIVKKHYELGIQFGVRGTPSIVT--STGE 191 (211)
T ss_dssp TTCC---CSSCCCSSHHHHHHHHHHHHTCCSSCEEEC--TTSC
T ss_pred cCCC---CChHHHHHHHHHHHHHHHHcCCCcCCEEEE--eCCE
Confidence 2111 111000 01123456788999999999988 5676
No 231
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=97.53 E-value=6.7e-05 Score=60.67 Aligned_cols=62 Identities=15% Similarity=0.137 Sum_probs=38.9
Q ss_pred EEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeeccccccChH
Q 008311 350 LLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPTLIDRA 427 (570)
Q Consensus 350 lL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~l~D~~ 427 (570)
+..||++|||+|+... |.++.+++ +.++..+.+ | .|.. +
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~---------~~~~~~~~v-~-----~~~~----------------------~-- 44 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPS---------KYTVEIVHL-G-----TDKA----------------------R-- 44 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTT---------TEEEEEEET-T-----TCSS----------------------T--
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhc---------CCeEEEEEe-c-----CChh----------------------h--
Confidence 4568999999999877 55543322 345555554 1 1100 1
Q ss_pred HHHHHHHhCCCCCCceEEEECCCCcEEc
Q 008311 428 VIRYVKDVWHFKNKPILVVLDPQGRVVS 455 (570)
Q Consensus 428 ~~~~L~~~y~V~~IPtlVVLDpqGkVv~ 455 (570)
..+.+.||++++|++++ +|+++.
T Consensus 45 --~~~~~~~gv~~vPt~~i---~g~~~~ 67 (80)
T 2k8s_A 45 --IAEAEKAGVKSVPALVI---DGAAFH 67 (80)
T ss_dssp --HHHHHHHTCCEEEEEEE---TTEEEE
T ss_pred --HHHHHHcCCCcCCEEEE---CCEEEE
Confidence 12345689999999887 788654
No 232
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=97.52 E-value=0.00013 Score=58.77 Aligned_cols=64 Identities=9% Similarity=0.126 Sum_probs=43.1
Q ss_pred EEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeeccccccChH
Q 008311 350 LLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPTLIDRA 427 (570)
Q Consensus 350 lL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~l~D~~ 427 (570)
++.||++|||+|+... |.++..+++ ++++..|.+ +.+. . .
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~--------~i~~~~vdi--------~~~~-------~-------------~-- 44 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD--------DFQYQYVDI--------RAEG-------I-------------T-- 44 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS--------SCEEEEECH--------HHHT-------C-------------C--
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC--------CceEEEEec--------ccCh-------H-------------H--
Confidence 5679999999999877 777665542 478888775 1110 0 0
Q ss_pred HHHHHHHhCC--CCCCceEEEECCCCcEEc
Q 008311 428 VIRYVKDVWH--FKNKPILVVLDPQGRVVS 455 (570)
Q Consensus 428 ~~~~L~~~y~--V~~IPtlVVLDpqGkVv~ 455 (570)
...+.+.++ +.++|++++ +|+.+.
T Consensus 45 -~~~l~~~~~~~~~~vP~i~~---~g~~i~ 70 (85)
T 1ego_A 45 -KEDLQQKAGKPVETVPQIFV---DQQHIG 70 (85)
T ss_dssp -SHHHHHHTCCCSCCSCEEEE---TTEEEE
T ss_pred -HHHHHHHhCCCCceeCeEEE---CCEEEE
Confidence 123666788 899999854 577764
No 233
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.49 E-value=0.00085 Score=65.93 Aligned_cols=105 Identities=6% Similarity=-0.058 Sum_probs=57.9
Q ss_pred eeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCCh---------hhH-HHH
Q 008311 339 VNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDD---------PTQ-KKF 406 (570)
Q Consensus 339 Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D---------~~~-~~F 406 (570)
+.+..-.+|++++.||+.|||+|+.+. |.++.++ .++.|+++++--.. ..+. .+. +.|
T Consensus 90 i~~G~~~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~---------g~v~v~~~~~p~~~-~~s~~~a~a~~~a~d~~~~~ 159 (241)
T 1v58_A 90 LLDGKKDAPVIVYVFADPFCPYCKQFWQQARPWVDS---------GKVQLRTLLVGVIK-PESPATAAAILASKDPAKTW 159 (241)
T ss_dssp EEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHT---------TSEEEEEEECCCSS-TTHHHHHHHHHHSSSHHHHH
T ss_pred ceECCCCCCeEEEEEECCCChhHHHHHHHHHHHHhC---------CcEEEEEEECCcCC-CcHHHHHHHHHHccCHHHHH
Confidence 333344789999999999999999988 6654431 25778777651000 0010 011 222
Q ss_pred HHHHcCCCceeeccccccCh------HHHHHHHHhCCCCCCceEEEECCCCcE
Q 008311 407 ETLQSSMPWYTVYHPTLIDR------AVIRYVKDVWHFKNKPILVVLDPQGRV 453 (570)
Q Consensus 407 ~~~~~~MPW~aV~fP~l~D~------~~~~~L~~~y~V~~IPtlVVLDpqGkV 453 (570)
+.+...+.--.+.-....+. .....+.+.+||++.|++++.|.+|++
T Consensus 160 ~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~ 212 (241)
T 1v58_A 160 QQYEASGGKLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTL 212 (241)
T ss_dssp HHHHHTTTCCCCCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEE
T ss_pred HHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCE
Confidence 22211110000000000000 122356788999999999999989975
No 234
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=97.48 E-value=0.00023 Score=74.09 Aligned_cols=73 Identities=11% Similarity=0.110 Sum_probs=45.7
Q ss_pred CCCEEEEEEecCCCHHhHHHH-HH---HHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecc
Q 008311 345 RRKNVLLLISDLDISQEELSI-LE---QIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYH 420 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~-L~---~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~f 420 (570)
.+++|+|+|||+||++|+..- |. -.|++....- + +.++.++-|.. ++.
T Consensus 29 ~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~-~-~~~v~~~~Vd~--------~~~------------------ 80 (367)
T 3us3_A 29 KYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVL-E-DKGVGFGLVDS--------EKD------------------ 80 (367)
T ss_dssp HCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHH-T-TTTEEEEEEET--------TTT------------------
T ss_pred hCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHh-h-cCCceEEEEeC--------ccc------------------
Confidence 469999999999999984432 22 3444432211 1 23466665553 111
Q ss_pred ccccChHHHHHHHHhCCCCCCceEEEECCCCcEEc
Q 008311 421 PTLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVS 455 (570)
Q Consensus 421 P~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~ 455 (570)
..++++|+|+++||++++. +|+++.
T Consensus 81 ---------~~l~~~~~V~~~PTl~~f~-~G~~~~ 105 (367)
T 3us3_A 81 ---------AAVAKKLGLTEEDSIYVFK-EDEVIE 105 (367)
T ss_dssp ---------HHHHHHHTCCSTTEEEEEE-TTEEEE
T ss_pred ---------HHHHHHcCCCcCceEEEEE-CCcEEE
Confidence 1367789999999999886 577653
No 235
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=97.37 E-value=0.00029 Score=62.05 Aligned_cols=57 Identities=14% Similarity=0.208 Sum_probs=46.4
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhCC--CCEEEEEEecCCchhhhhhccccc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTAR--IPLEMVYVGKSTKRDKCGESWQPL 559 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~--~~fEiv~Vs~d~~~e~~~~~~~~~ 559 (570)
...||.+.|||.+. |++|+.+.+.+.+++++.+ ..+++++|+.|.+.+.++++++..
T Consensus 25 ~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~ 84 (144)
T 1i5g_A 25 SLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKM 84 (144)
T ss_dssp GGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTC
T ss_pred HcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhC
Confidence 46899999999888 9999999999999998643 689999999998765554444433
No 236
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=97.36 E-value=0.00045 Score=60.55 Aligned_cols=58 Identities=17% Similarity=0.200 Sum_probs=47.1
Q ss_pred cccCCeEEEEEecCC-CchHHHHHHHHHHHHhhCC--CCEEEEEEecCCchhhhhhccccc
Q 008311 502 WIKEGKYIFLYGGDD-VEWVRKFTTAARSVANTAR--IPLEMVYVGKSTKRDKCGESWQPL 559 (570)
Q Consensus 502 ~~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~--~~fEiv~Vs~d~~~e~~~~~~~~~ 559 (570)
....||.+.|||.+. |++|+.+.+.+.+++++.+ .++++++|+.|.+.+.++++++..
T Consensus 24 ~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~ 84 (144)
T 1o73_A 24 GSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKM 84 (144)
T ss_dssp GGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTC
T ss_pred HHhCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhC
Confidence 346899999999888 9999999999999997633 689999999998766555554443
No 237
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=97.35 E-value=0.00031 Score=62.16 Aligned_cols=56 Identities=18% Similarity=0.224 Sum_probs=45.6
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhCC--CCEEEEEEecCCchhhhhhcccc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTAR--IPLEMVYVGKSTKRDKCGESWQP 558 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~--~~fEiv~Vs~d~~~e~~~~~~~~ 558 (570)
...||.+.|||.+. |++|+.+.+.+.+++++.+ .++++++|+.|.+.+.++++++.
T Consensus 25 ~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~ 83 (146)
T 1o8x_A 25 SLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAK 83 (146)
T ss_dssp GGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTT
T ss_pred HhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHH
Confidence 46899999999888 9999999999999998643 68999999999876544444433
No 238
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.35 E-value=0.00052 Score=64.07 Aligned_cols=40 Identities=8% Similarity=-0.090 Sum_probs=33.3
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEec
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPI 391 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsI 391 (570)
.||++++.||+.|||+|+.+. |.++.+++. .++.++.+|+
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~-------~~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLP-------ADVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCC-------TTEEEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCC-------CCeEEEEEeh
Confidence 789999999999999999998 777666552 3688888886
No 239
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=97.24 E-value=0.00038 Score=58.49 Aligned_cols=16 Identities=19% Similarity=0.127 Sum_probs=13.8
Q ss_pred EEEEecCCCHHhHHHH
Q 008311 350 LLLISDLDISQEELSI 365 (570)
Q Consensus 350 lL~FwAsWCpPCr~e~ 365 (570)
++.|||+||+||+...
T Consensus 3 vv~f~a~~C~~C~~~~ 18 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAV 18 (87)
T ss_dssp EEEEECSSCHHHHHHH
T ss_pred EEEEECCCCchHHHHH
Confidence 5679999999999765
No 240
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=97.23 E-value=0.00045 Score=63.28 Aligned_cols=63 Identities=14% Similarity=0.139 Sum_probs=49.4
Q ss_pred ccccccCCeEEEEEecCC-CchHHHHHHHHHHHHhhCC--CCEEEEEEecCCchhhhhhccccccc
Q 008311 499 VLDWIKEGKYIFLYGGDD-VEWVRKFTTAARSVANTAR--IPLEMVYVGKSTKRDKCGESWQPLQL 561 (570)
Q Consensus 499 i~~~~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~--~~fEiv~Vs~d~~~e~~~~~~~~~~~ 561 (570)
+.-....||.+.|||.+. |++|+.+.+.+.++|++.+ ..+++++|+.|.+.+.+++.++..++
T Consensus 41 v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~ 106 (165)
T 3s9f_A 41 ADMDSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPW 106 (165)
T ss_dssp ECSGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSS
T ss_pred ccHHHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCC
Confidence 333346899999999888 9999999999999998633 58999999999987655555544433
No 241
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=97.21 E-value=0.00028 Score=62.53 Aligned_cols=67 Identities=9% Similarity=0.070 Sum_probs=47.8
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
.+++|+++|||+ |+||+... |.++-++++ .++.++.|.+ |+ +|
T Consensus 22 ~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~-------gk~~f~~vd~--------d~------------------~~- 66 (133)
T 2djk_A 22 AGIPLAYIFAET-AEERKELSDKLKPIAEAQR-------GVINFGTIDA--------KA------------------FG- 66 (133)
T ss_dssp TTSCEEEEECSC-SSSHHHHHHHHHHHHHSST-------TTSEEEEECT--------TT------------------TG-
T ss_pred CCCCEEEEEecC-hhhHHHHHHHHHHHHHHhC-------CeEEEEEEch--------HH------------------hH-
Confidence 357899999999 89999655 767666653 3577888864 21 11
Q ss_pred ccChHHHHHHHHhCCCCC--CceEEEECC-CCcEE
Q 008311 423 LIDRAVIRYVKDVWHFKN--KPILVVLDP-QGRVV 454 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~~--IPtlVVLDp-qGkVv 454 (570)
.+.+.||+++ +|++++++. +|+..
T Consensus 67 --------~~a~~~gi~~~~iPtl~i~~~~~g~~~ 93 (133)
T 2djk_A 67 --------AHAGNLNLKTDKFPAFAIQEVAKNQKF 93 (133)
T ss_dssp --------GGTTTTTCCSSSSSEEEEECTTTCCBC
T ss_pred --------HHHHHcCCCcccCCEEEEEecCcCccc
Confidence 1455699999 999999984 67663
No 242
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=97.19 E-value=0.00069 Score=55.89 Aligned_cols=64 Identities=6% Similarity=0.087 Sum_probs=54.2
Q ss_pred CCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 505 EGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 505 egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
+++.+.+||.++ |++|+.+.+.+.+++++.+..+.++.|..|+..+ +.+.+++-..|++++ +|+
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~v~~~Pt~~~~~~G~ 84 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPS-TAAKYEVMSIPTLIVFKDGQ 84 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH-HHHHTTCCSBSEEEEEETTE
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHH-HHHhCCCcccCEEEEEeCCe
Confidence 789999999888 9999999999999998877679999999887765 455678889999876 553
No 243
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=97.18 E-value=0.00057 Score=59.93 Aligned_cols=35 Identities=23% Similarity=0.201 Sum_probs=26.0
Q ss_pred EEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEec
Q 008311 348 NVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPI 391 (570)
Q Consensus 348 vVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsI 391 (570)
.+++.||+.|||+|+... |.++-+++ ++++.-|.|
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~---------~i~~~~vDI 66 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKS---------WFELEVINI 66 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHS---------CCCCEEEET
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhc---------CCeEEEEEC
Confidence 568889999999999877 66665543 366666665
No 244
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=97.16 E-value=0.00086 Score=55.75 Aligned_cols=65 Identities=9% Similarity=0.069 Sum_probs=54.1
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
..||.+.++|.++ |++|+.+.+.+.+++++.+.++.++.|..|+..+ +.+.+++-..|++++ +|+
T Consensus 18 ~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~v~~~Pt~~~~~~G~ 85 (108)
T 2trx_A 18 KADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPG-TAPKYGIRGIPTLLLFKNGE 85 (108)
T ss_dssp TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTT-HHHHTTCCSSSEEEEEETTE
T ss_pred hcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHH-HHHHcCCcccCEEEEEeCCE
Confidence 4688999999888 9999999999999998866679999998887654 555678889999987 664
No 245
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=97.16 E-value=0.00041 Score=64.98 Aligned_cols=62 Identities=13% Similarity=0.170 Sum_probs=53.1
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcc--cccccccccc
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESW--QPLQLKSLVT 566 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~--~~~~~~~~~~ 566 (570)
..||.+.++|++. |+|||.+.|.+.+++++.+ +++++.|+-|...+.++++. ++.++|++++
T Consensus 52 ~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~ 116 (167)
T 1z6n_A 52 IERRYRLLVAGEMWCPDCQINLAALDFAQRLQP-NIELAIISKGRAEDDLRQRLALERIAIPLVLV 116 (167)
T ss_dssp CCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT-TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEE
T ss_pred hCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEE
Confidence 4689999999999 9999999999999987643 79999999988877777765 5889999765
No 246
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.14 E-value=0.0013 Score=61.22 Aligned_cols=40 Identities=10% Similarity=-0.208 Sum_probs=34.0
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEec
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPI 391 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsI 391 (570)
+||++++.||+.|||+|+.+. |.++.++++ .++.+..+|+
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~-------~~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALP-------SDAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSC-------TTEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCC-------CceEEEEecc
Confidence 689999999999999999988 888877763 3688888886
No 247
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=97.11 E-value=0.00085 Score=55.67 Aligned_cols=65 Identities=9% Similarity=0.099 Sum_probs=53.3
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
..||.+.++|.+. |++|+.+.+.+.+++++.+..+.++.|..|+..+ +.+.+++-..|++++ +|+
T Consensus 17 ~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~v~~~Pt~~~~~~G~ 84 (107)
T 1dby_A 17 ESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPN-VASEYGIRSIPTIMVFKGGK 84 (107)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH-HHHHHTCCSSCEEEEESSSS
T ss_pred cCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHH-HHHHCCCCcCCEEEEEeCCE
Confidence 3578888888887 9999999999999998766679999999887654 445568889999877 664
No 248
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=97.11 E-value=0.00073 Score=56.68 Aligned_cols=65 Identities=12% Similarity=0.148 Sum_probs=53.6
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
..||.+.++|.+. |++|+.+.+.+.+++++.+..+.++.|..|...+ +.+.+++-..|++++ +|+
T Consensus 21 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~v~~~Pt~~~~~~G~ 88 (112)
T 1t00_A 21 KNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPG-TAAKYGVMSIPTLNVYQGGE 88 (112)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH-HHHHTTCCSSSEEEEEETTE
T ss_pred hCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHH-HHHhCCCCcccEEEEEeCCE
Confidence 4688888888888 9999999999999998866679999999887655 455578889999887 553
No 249
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=97.09 E-value=0.0011 Score=54.74 Aligned_cols=64 Identities=11% Similarity=0.057 Sum_probs=53.8
Q ss_pred CCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 505 EGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 505 egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
+|+.+.+||.++ |++|+.+.+.+.+++++.+.++.++.|..|+..+ +.+.+++-..|++++ +|+
T Consensus 19 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~v~~~Pt~~~~~~G~ 85 (106)
T 1xwb_A 19 SGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECED-IAMEYNISSMPTFVFLKNGV 85 (106)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHH-HHHHTTCCSSSEEEEEETTE
T ss_pred CCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHH-HHHHcCCCcccEEEEEcCCc
Confidence 688999999888 9999999999999988866789999999887654 555678889999987 554
No 250
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=97.09 E-value=0.00066 Score=59.10 Aligned_cols=67 Identities=9% Similarity=0.031 Sum_probs=56.3
Q ss_pred cccCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 502 WIKEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 502 ~~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
...+||.+.++|.+. |++|+.+.+.+.+++++.+.++.++.|..|+.. ++.+.+++-++|++++ +|+
T Consensus 38 ~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~-~l~~~~~v~~~Pt~~~~~~G~ 107 (128)
T 3ul3_B 38 VNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNE-SLARKFSVKSLPTIILLKNKT 107 (128)
T ss_dssp TTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCH-HHHHHTTCCSSSEEEEEETTE
T ss_pred HHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCH-HHHHHcCCCCcCEEEEEECCE
Confidence 346899999999888 999999999999999876678999999988765 4556678999999887 554
No 251
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=97.07 E-value=0.00082 Score=56.55 Aligned_cols=64 Identities=5% Similarity=-0.051 Sum_probs=53.2
Q ss_pred CCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 505 EGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 505 egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
.||.+.++|.+. |++|+.+.+.+.+++++.+ ++.++.|..++....+.+.+++-.+|++++ +|+
T Consensus 23 ~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~~~~~~~~~~~v~~~Pt~~~~~~G~ 89 (111)
T 2pu9_C 23 GDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL-DVIFLKLDCNQENKTLAKELGIRVVPTFKILKENS 89 (111)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSTTHHHHHHHCCSBSSEEEEESSSS
T ss_pred CCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC-CeEEEEEecCcchHHHHHHcCCCeeeEEEEEeCCc
Confidence 588899999888 9999999999999988744 478888888766667777889999999887 554
No 252
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.06 E-value=0.0068 Score=55.45 Aligned_cols=49 Identities=8% Similarity=-0.012 Sum_probs=39.0
Q ss_pred eeeccccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEec
Q 008311 338 RVNIEVLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPI 391 (570)
Q Consensus 338 ~Vsls~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsI 391 (570)
.+.+..-.+|++++.|+..|||+|+.+. +.++.+++.+ +.++.|++.++
T Consensus 19 ~~~~G~~~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~-----~~~v~~~~~~~ 69 (175)
T 1z6m_A 19 GLHIGESNAPVKMIEFINVRCPYCRKWFEESEELLAQSVK-----SGKVERIIKLF 69 (175)
T ss_dssp SEEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHH-----TTSEEEEEEEC
T ss_pred CcccCCCCCCeEEEEEECCCCcchHHHHHHHHHHHHHHhh-----CCcEEEEEEeC
Confidence 3455566899999999999999999998 8888887742 23688888876
No 253
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=97.05 E-value=0.00093 Score=55.23 Aligned_cols=66 Identities=8% Similarity=0.094 Sum_probs=54.0
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
...||.+.++|.++ |++|+.+.+.+.+++++.+..+.++.|..|+..+ +.+.+++-..|++++ +|+
T Consensus 14 ~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~-~~~~~~v~~~Pt~~~~~~G~ 82 (105)
T 1nsw_A 14 IQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPE-TTSQFGIMSIPTLILFKGGR 82 (105)
T ss_dssp HSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHH-HHHHTTCCSSSEEEEEETTE
T ss_pred HhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHH-HHHHcCCccccEEEEEeCCe
Confidence 34678888888888 9999999999999998866679999998887654 555678889999887 664
No 254
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=97.03 E-value=0.00069 Score=57.46 Aligned_cols=64 Identities=6% Similarity=0.091 Sum_probs=53.8
Q ss_pred CCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 505 EGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 505 egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
.||.+.++|.++ |++|+.+.+.+.+++++.+.++.++.|..|+..+ +.+.+++-.+|++++ +|+
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~-l~~~~~v~~~Pt~~~~~~G~ 82 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQE-TAGKYGVMSIPTLLVLKDGE 82 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCS-HHHHTTCCSBSEEEEEETTE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHH-HHHHcCCCcccEEEEEeCCE
Confidence 789999999888 9999999999999998765579999999887654 455568889999987 665
No 255
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=97.02 E-value=0.00082 Score=57.96 Aligned_cols=66 Identities=12% Similarity=0.146 Sum_probs=54.9
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEe--cCCchhhhhhcccccccccccc---CCC
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVG--KSTKRDKCGESWQPLQLKSLVT---SGK 569 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs--~d~~~e~~~~~~~~~~~~~~~~---~~~ 569 (570)
..+||.+.++|.+. |++|+.+.+.+.+++++.+..+.++.|. .|... .+.+.+++..+|++++ +|+
T Consensus 23 ~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~-~~~~~~~v~~~Pt~~~~~~~G~ 94 (126)
T 2l57_A 23 AKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNI-DLAYKYDANIVPTTVFLDKEGN 94 (126)
T ss_dssp CCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHH-HHHHHTTCCSSSEEEEECTTCC
T ss_pred HhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchH-HHHHHcCCcceeEEEEECCCCC
Confidence 46789999999888 9999999999999998866789999999 65443 4566678899999988 675
No 256
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=97.01 E-value=0.00063 Score=54.08 Aligned_cols=59 Identities=5% Similarity=0.044 Sum_probs=48.1
Q ss_pred EEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhccccccccccccCCC
Q 008311 510 FLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVTSGK 569 (570)
Q Consensus 510 ~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~~~~ 569 (570)
.++|++. |++|+.+.+.+.+++++.+.+++++.|.-|+..+- .+.+++...|+++++|+
T Consensus 5 vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~-~~~~~v~~~Pt~~~~G~ 64 (85)
T 1nho_A 5 IEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREK-AIEYGLMAVPAIAINGV 64 (85)
T ss_dssp EEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGGG-GGGTCSSCSSEEEETTT
T ss_pred EEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCHHH-HHhCCceeeCEEEECCE
Confidence 3556666 99999999999999887666789999988876654 44568889999999886
No 257
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=96.99 E-value=0.00069 Score=53.83 Aligned_cols=60 Identities=12% Similarity=0.108 Sum_probs=48.7
Q ss_pred EEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhccccccccccccCCC
Q 008311 509 IFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVTSGK 569 (570)
Q Consensus 509 I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~~~~ 569 (570)
..++|++. |++|+++.+.+.+++++.+.+++++.|.-|+..+ +.+-+++-..|+++++|+
T Consensus 5 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~-~~~~~~v~~~Pt~~~~G~ 65 (85)
T 1fo5_A 5 KIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQ-KAMEYGIMAVPTIVINGD 65 (85)
T ss_dssp EEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSCC-TTTSTTTCCSSEEEETTE
T ss_pred EEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCHH-HHHHCCCcccCEEEECCE
Confidence 45566666 9999999999999988877789999999887664 445568889999999875
No 258
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.99 E-value=0.001 Score=72.35 Aligned_cols=67 Identities=9% Similarity=-0.011 Sum_probs=48.1
Q ss_pred cCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeeccc
Q 008311 344 LRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHP 421 (570)
Q Consensus 344 LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP 421 (570)
+.+++++..||++|||||+... |.++-.++ .++++.-|.+ +. +
T Consensus 115 ~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~--------~~v~~~~vd~--------~~------------------~- 159 (521)
T 1hyu_A 115 IDGDFEFETYYSLSCHNCPDVVQALNLMAVLN--------PRIKHTAIDG--------GT------------------F- 159 (521)
T ss_dssp CCSCEEEEEEECTTCSSHHHHHHHHHHHHHHC--------TTEEEEEEET--------TT------------------C-
T ss_pred cCCCcceEEEECCCCcCcHHHHHHHHHHHhHc--------CceEEEEEec--------hh------------------h-
Confidence 4577889999999999999876 66654432 2466666653 10 1
Q ss_pred cccChHHHHHHHHhCCCCCCceEEEECCCCcEEcc
Q 008311 422 TLIDRAVIRYVKDVWHFKNKPILVVLDPQGRVVSP 456 (570)
Q Consensus 422 ~l~D~~~~~~L~~~y~V~~IPtlVVLDpqGkVv~~ 456 (570)
..+.++|++.++|++++ +|+.+..
T Consensus 160 --------~~~~~~~~i~svPt~~i---~g~~~~~ 183 (521)
T 1hyu_A 160 --------QNEITERNVMGVPAVFV---NGKEFGQ 183 (521)
T ss_dssp --------HHHHHHTTCCSSSEEEE---TTEEEEE
T ss_pred --------HHHHHHhCCCccCEEEE---CCEEEec
Confidence 13677799999999987 8888754
No 259
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=96.99 E-value=0.0013 Score=54.19 Aligned_cols=65 Identities=11% Similarity=0.101 Sum_probs=53.4
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
..|+.+.++|.++ |++|+.+.+.+.+++++.+..+.++.|..|+..+ +.+.+++-..|++++ +|+
T Consensus 18 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~v~~~Pt~~~~~~G~ 85 (107)
T 2i4a_A 18 KASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPE-TPNAYQVRSIPTLMLVRDGK 85 (107)
T ss_dssp TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCH-HHHHTTCCSSSEEEEEETTE
T ss_pred hCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHH-HHHhcCCCccCEEEEEeCCE
Confidence 4688899999888 9999999999999988765579999999887654 445567889999887 664
No 260
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=96.98 E-value=0.00087 Score=57.51 Aligned_cols=64 Identities=5% Similarity=-0.046 Sum_probs=53.0
Q ss_pred CCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 505 EGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 505 egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
+||.+.++|.++ |++|+.+.+.+.+++++.+ ++.++.|..++....+.+.+++-.+|++++ +|+
T Consensus 36 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~v~~~Pt~~~~~~G~ 102 (124)
T 1faa_A 36 GDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL-DVIFLKLDCNQENKTLAKELGIRVVPTFKILKENS 102 (124)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSTTHHHHHHHCCSSSSEEEEEETTE
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC-CCEEEEEecCcchHHHHHHcCCCeeeEEEEEeCCc
Confidence 688888999888 9999999999999987743 477888888766667778889999999887 554
No 261
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=96.98 E-value=0.001 Score=57.13 Aligned_cols=65 Identities=6% Similarity=0.038 Sum_probs=53.9
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
..||.+.|||.++ |++|+.+.+.+.+++++.+.++.++.|..|+..+ +.+.+++-..|++++ +|+
T Consensus 29 ~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~-l~~~~~v~~~Pt~~~~~~G~ 96 (119)
T 1w4v_A 29 NSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTD-LAIEYEVSAVPTVLAMKNGD 96 (119)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTHH-HHHHTTCCSSSEEEEEETTE
T ss_pred cCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCHH-HHHHcCCCcccEEEEEeCCc
Confidence 3678888999888 9999999999999998766679999998887654 556678889999987 664
No 262
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=96.97 E-value=0.001 Score=55.38 Aligned_cols=65 Identities=12% Similarity=0.155 Sum_probs=54.3
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
..++.+.++|.+. |++|+.+.+.+.+++++.+..+.++.|.-|+.. .+.+.+++-.+|++++ +|+
T Consensus 20 ~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~l~~~~~v~~~Pt~~~~~~g~ 87 (111)
T 3gnj_A 20 DEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEK-TLFQRFSLKGVPQILYFKDGE 87 (111)
T ss_dssp TSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCH-HHHHHTTCCSSCEEEEEETTE
T ss_pred hcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcCh-hHHHhcCCCcCCEEEEEECCE
Confidence 4678889999888 999999999999999887768999999988765 4556678889999877 564
No 263
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=96.96 E-value=0.0012 Score=54.31 Aligned_cols=64 Identities=3% Similarity=-0.011 Sum_probs=52.5
Q ss_pred CCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 505 EGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 505 egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
.+|.+.++|.+. |++|+.+.+.+.+++++.+.++.++.|..|+..+ +.+.+++-..|++++ +|+
T Consensus 17 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~v~~~Pt~~~~~~g~ 83 (105)
T 1fb6_A 17 SEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPG-IATQYNIRSIPTVLFFKNGE 83 (105)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH-HHHHTTCCSSSEEEEEETTE
T ss_pred CCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHH-HHHhCCCCcccEEEEEeCCe
Confidence 578888888777 9999999999999998866679999998887654 455678889999887 554
No 264
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=96.95 E-value=0.0013 Score=55.11 Aligned_cols=65 Identities=12% Similarity=0.055 Sum_probs=53.5
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
..|+.+.+||.++ |++|+.+.+.+.+++++.+..+.++.|..|+..+ +.+.+++-..|++++ +|+
T Consensus 23 ~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~-~~~~~~v~~~Pt~~~~~~G~ 90 (115)
T 1thx_A 23 KAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPT-TVKKYKVEGVPALRLVKGEQ 90 (115)
T ss_dssp TCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHH-HHHHTTCCSSSEEEEEETTE
T ss_pred cCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHH-HHHHcCCCceeEEEEEcCCE
Confidence 4688888888888 9999999999999998766679999999887654 455568889999887 554
No 265
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=96.95 E-value=0.0012 Score=54.43 Aligned_cols=65 Identities=6% Similarity=0.085 Sum_probs=53.9
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
..||.+.+||.++ |++|+.+.+.+.+++++.+.++.++.|..|+..+ +.+.+++-..|++++ +|+
T Consensus 16 ~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~v~~~Pt~~~~~~g~ 83 (109)
T 2yzu_A 16 GQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPK-TAMRYRVMSIPTVILFKDGQ 83 (109)
T ss_dssp HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHH-HHHHTTCCSSSEEEEEETTE
T ss_pred cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHh-HHHhCCCCcCCEEEEEeCCc
Confidence 4688889999888 9999999999999998766679999999887654 555678889999887 664
No 266
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=96.95 E-value=0.0014 Score=57.53 Aligned_cols=65 Identities=9% Similarity=0.069 Sum_probs=54.5
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
..||.+.++|.+. |++|+.+.+.+.+++++.+.++.++.|..|+..+ +.+.+++-.+|++++ +|+
T Consensus 38 ~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~-l~~~~~v~~~Pt~~~~~~G~ 105 (128)
T 2o8v_B 38 KADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPG-TAPKYGIRGIPTLLLFKNGE 105 (128)
T ss_dssp TCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCT-TSGGGTCCSSSEEEEEETTE
T ss_pred hcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHH-HHHHcCCCccCEEEEEeCCE
Confidence 4689999999888 9999999999999998866679999999887654 556678889999987 664
No 267
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=96.95 E-value=0.0011 Score=58.41 Aligned_cols=56 Identities=14% Similarity=0.022 Sum_probs=46.8
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhC-CCCEEEEEEecCCchhhhhhcccc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTA-RIPLEMVYVGKSTKRDKCGESWQP 558 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~-~~~fEiv~Vs~d~~~e~~~~~~~~ 558 (570)
...||.+.|+|.+. |++|+...+.+.++|++. +..++++.|+.|.+.+.+++.++.
T Consensus 29 ~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~ 86 (143)
T 4fo5_A 29 NQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKI 86 (143)
T ss_dssp CSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHH
T ss_pred HhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHH
Confidence 35899999999888 999999999999999874 468999999999877666555544
No 268
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=96.95 E-value=0.0011 Score=56.06 Aligned_cols=65 Identities=9% Similarity=0.072 Sum_probs=52.9
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
+.+||.+.++|.+. |++|+.+.+.+.+++++.+ .+.++.|..|...+ +.+.+++-.+|++++ +|+
T Consensus 21 ~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~-~~~~~~vd~~~~~~-l~~~~~v~~~Pt~~~~~~G~ 88 (109)
T 3f3q_A 21 IAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP-QADFYKLDVDELGD-VAQKNEVSAMPTLLLFKNGK 88 (109)
T ss_dssp TTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTCHH-HHHHTTCCSSSEEEEEETTE
T ss_pred HhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECCCCHH-HHHHcCCCccCEEEEEECCE
Confidence 45799999999888 9999999999999988743 37888888876654 556688999999987 553
No 269
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=96.94 E-value=0.0032 Score=58.42 Aligned_cols=41 Identities=12% Similarity=0.007 Sum_probs=34.0
Q ss_pred cCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEec
Q 008311 344 LRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPI 391 (570)
Q Consensus 344 LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsI 391 (570)
+.||++++.||..|||+|..+. |.++.+++. .+++++++|+
T Consensus 23 ~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~-------~~v~~~~~p~ 65 (193)
T 2rem_A 23 LAGKIEVVEIFGYTCPHCAHFDSKLQAWGARQA-------KDVRFTLVPA 65 (193)
T ss_dssp CTTCEEEEEEECTTCHHHHHHHHHHHHHHHTSC-------TTEEEEEEEC
T ss_pred CCCCeEEEEEECCCChhHhhhhHHHHHHHHhcC-------CceEEEEeCc
Confidence 4789999999999999999998 777766552 3688888887
No 270
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=96.93 E-value=0.0013 Score=54.88 Aligned_cols=62 Identities=8% Similarity=0.095 Sum_probs=46.2
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
+.++|.+.+||.++ |++|+.+.|.+.+++++.+ ++.++.|..|+..+ +.+.+++.++|++++
T Consensus 15 ~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~~~~~~-l~~~~~v~~~Pt~~~ 77 (105)
T 4euy_A 15 IEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN-YVEKIEILLQDMQE-IAGRYAVFTGPTVLL 77 (105)
T ss_dssp TTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT-TEEEEEEEECCC----------CCCCEEEE
T ss_pred HhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC-CceEEEEECCCCHH-HHHhcCCCCCCEEEE
Confidence 35789999999988 9999999999999988753 68999998887654 555678889999876
No 271
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=96.92 E-value=0.0013 Score=55.79 Aligned_cols=65 Identities=11% Similarity=0.155 Sum_probs=53.7
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
.+|+.+.+||.++ |++|+.+.+.+.+++++.+.++.++.|..|...+ +.+.+++-..|++++ +|+
T Consensus 28 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~i~~~Pt~~~~~~g~ 95 (121)
T 2i1u_A 28 SSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPE-TARNFQVVSIPTLILFKDGQ 95 (121)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH-HHHHTTCCSSSEEEEEETTE
T ss_pred hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHH-HHHhcCCCcCCEEEEEECCE
Confidence 4688888999888 9999999999999998766679999999887654 555678889999987 554
No 272
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=96.90 E-value=0.0011 Score=54.73 Aligned_cols=63 Identities=8% Similarity=0.121 Sum_probs=52.9
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
..+|+.+.+||.+. |++|+.+.+.+.+++++.+..+.++.|..|+..+ +.+.+++-..|++++
T Consensus 18 ~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~i~~~Pt~~~ 81 (109)
T 3tco_A 18 IRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQK-IADKYSVLNIPTTLI 81 (109)
T ss_dssp HHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHH-HHHHTTCCSSSEEEE
T ss_pred HhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHH-HHHhcCcccCCEEEE
Confidence 45689999999888 9999999999999998877789999999887654 555678889999665
No 273
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=96.89 E-value=0.0011 Score=55.37 Aligned_cols=63 Identities=10% Similarity=-0.019 Sum_probs=51.9
Q ss_pred CeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 506 GKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 506 gk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
||.+.++|.++ |++|+.+.+.+.+++++.+.++.++.|..|...+ +.+.+++-..|++++ +|+
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~-~~~~~~v~~~Pt~~~~~~G~ 89 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAA-VAEAAGITAMPTFHVYKDGV 89 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHH-HHHHHTCCBSSEEEEEETTE
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHH-HHHHcCCCcccEEEEEECCe
Confidence 88888888888 9999999999999988765578999998877554 555668889999887 564
No 274
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=96.87 E-value=0.0019 Score=56.17 Aligned_cols=64 Identities=9% Similarity=0.117 Sum_probs=52.8
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
..||.+.+||.+. |++|+.+.+.+.+++++.+ ++.++.|..|+.. ++.+.+++-.+|++++ +|+
T Consensus 36 ~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d~~~-~l~~~~~v~~~Pt~~~~~~G~ 102 (124)
T 1xfl_A 36 ESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTDELK-SVASDWAIQAMPTFMFLKEGK 102 (124)
T ss_dssp HTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTSH-HHHHHTTCCSSSEEEEEETTE
T ss_pred hcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECccCH-HHHHHcCCCccCEEEEEECCE
Confidence 3689999999888 9999999999999988754 6888888887654 4556678889999987 664
No 275
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=96.86 E-value=0.0015 Score=55.25 Aligned_cols=65 Identities=8% Similarity=0.078 Sum_probs=52.9
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
+.+||.+.+||.++ |++|+.+.+.+.+++++.+ ++.++.|..|+..+ +.+.+++-..|++++ +|+
T Consensus 23 ~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~-~v~~~~vd~~~~~~-~~~~~~v~~~Pt~~~~~~G~ 90 (112)
T 1syr_A 23 ISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT-KMVFIKVDVDEVSE-VTEKENITSMPTFKVYKNGS 90 (112)
T ss_dssp HHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTTHH-HHHHTTCCSSSEEEEEETTE
T ss_pred HccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-CCEEEEEECCCCHH-HHHHcCCCcccEEEEEECCc
Confidence 35789999999888 9999999999999988744 58889998887654 445578889999987 564
No 276
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=96.84 E-value=0.0019 Score=53.87 Aligned_cols=64 Identities=13% Similarity=0.159 Sum_probs=51.8
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
..|+.+.++|.++ |++|+.+.+.+.+++++.+ ++.++.|..|+..+ +.+.+++-..|++++ +|+
T Consensus 24 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~-~~~~~~v~~~Pt~~~~~~G~ 90 (113)
T 1ti3_A 24 GSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVDELKA-VAEEWNVEAMPTFIFLKDGK 90 (113)
T ss_dssp TSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTCHH-HHHHHHCSSTTEEEEEETTE
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEccccHH-HHHhCCCCcccEEEEEeCCE
Confidence 3688999999888 9999999999999987754 78889998887654 445567889999987 554
No 277
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.83 E-value=0.0012 Score=56.12 Aligned_cols=38 Identities=13% Similarity=0.156 Sum_probs=25.5
Q ss_pred CCCEEEEEEecCCCHHhHHHHHHHHHHHHhhhhhccCCCeEEEEEec
Q 008311 345 RRKNVLLLISDLDISQEELSILEQIYNESRLHLTRQESHYEVVWIPI 391 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~L~~iY~elk~~~~k~~~~fEIV~IsI 391 (570)
..++++++||+.|||+|+... .+.+++. .++++.-|.+
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~--~~L~~l~-------~~i~~~~vdi 51 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAK--EVLQPYK-------DRFILQEVDI 51 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHH--HHTSTTS-------SSSEEEEEET
T ss_pred CCCCEEEEEeCCCCcchHHHH--HHHHHhh-------hCCeEEEEEC
Confidence 346678889999999998764 2223332 2367777775
No 278
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=96.80 E-value=0.0019 Score=55.39 Aligned_cols=63 Identities=6% Similarity=0.011 Sum_probs=52.1
Q ss_pred CCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 505 EGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 505 egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
.||.+.|+|.+. |++|+.+.+.+.+++++.+. +.++.|..|+.. ++.+.+++-.+|++++ +|+
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~~-~l~~~~~v~~~Pt~~~~~~G~ 95 (116)
T 3qfa_C 30 GDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQ-DVASECEVKSMPTFQFFKKGQ 95 (116)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTTTH-HHHHHTTCCSSSEEEEESSSS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCH-HHHHHcCCccccEEEEEeCCe
Confidence 689999999888 99999999999999887544 888889888765 4556678999999887 553
No 279
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=96.76 E-value=0.0021 Score=53.00 Aligned_cols=60 Identities=7% Similarity=-0.018 Sum_probs=50.1
Q ss_pred CCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 505 EGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 505 egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
+||.+.+||.++ |++|+.+.+.+.+++++.+. +.++.|..|+..+ +.+.+++-+.|++++
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~-~~~~~~v~~~Pt~~~ 79 (105)
T 3m9j_A 19 GDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDCQD-VASESEVKSMPTFQF 79 (105)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETTTCHH-HHHHTTCCBSSEEEE
T ss_pred CCCeEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhhhhHH-HHHHcCCCcCcEEEE
Confidence 688999999888 99999999999999877433 8888888887654 555678999999887
No 280
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=96.76 E-value=0.0007 Score=61.37 Aligned_cols=64 Identities=23% Similarity=0.275 Sum_probs=51.3
Q ss_pred ccCCeEEEEEe-cCC-CchHHHHHHHH---HHHHhhCCCCEEEEEEecCCch----------hhhhhcccccccccccc
Q 008311 503 IKEGKYIFLYG-GDD-VEWVRKFTTAA---RSVANTARIPLEMVYVGKSTKR----------DKCGESWQPLQLKSLVT 566 (570)
Q Consensus 503 ~~egk~I~lYf-gad-~~w~r~FT~~l---~~vy~~~~~~fEiv~Vs~d~~~----------e~~~~~~~~~~~~~~~~ 566 (570)
..+||.+.||| |+. |++|+.+.+.+ .++.+..+.+|.++.|..++.. .++.+.+++-.+|++++
T Consensus 44 ~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~~ 122 (154)
T 2ju5_A 44 KQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGFPELVF 122 (154)
T ss_dssp HHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSSSEEEE
T ss_pred HhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCCCCCCEEEE
Confidence 35789999999 577 99999999999 6765554567888888877653 46778889999999876
No 281
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=96.75 E-value=0.0022 Score=52.19 Aligned_cols=64 Identities=6% Similarity=0.038 Sum_probs=52.1
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
..|+.+.+||.++ |++|+.+.+.+.+++++.+. +.++.|..|+..+ +.+.+++-..|++++ +|+
T Consensus 14 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~~~v~~~Pt~~~~~~g~ 80 (104)
T 2e0q_A 14 ASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDENPD-IAARYGVMSLPTVIFFKDGE 80 (104)
T ss_dssp HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHH-HHHHTTCCSSCEEEEEETTE
T ss_pred hcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCCCHH-HHHhCCccccCEEEEEECCe
Confidence 4688888988887 99999999999999887544 8899998887654 455668888999987 664
No 282
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=96.74 E-value=0.0011 Score=56.68 Aligned_cols=62 Identities=10% Similarity=0.247 Sum_probs=48.2
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCch-----hhhhhcccccccccccc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKR-----DKCGESWQPLQLKSLVT 566 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~-----e~~~~~~~~~~~~~~~~ 566 (570)
+.+|+.+.+||++. |++|+.|.|.+.+++++.+. .++++..++.. ..+.+.+++..+|++++
T Consensus 26 ~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~~~i~~~Pt~~~ 93 (118)
T 1zma_A 26 LDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKA--HIYFINSEEPSQLNDLQAFRSRYGIPTVPGFVH 93 (118)
T ss_dssp HHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC--CCEEEETTCGGGHHHHHHHHHHHTCCSSCEEEE
T ss_pred HhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC--eEEEEECCCcCcHHHHHHHHHHcCCCCCCeEEE
Confidence 35688899999999 99999999999999876553 46677555433 35667788889999865
No 283
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=96.74 E-value=0.0024 Score=55.93 Aligned_cols=63 Identities=5% Similarity=-0.067 Sum_probs=53.7
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
...||.+.|||.+. |++|+.+.+.+.+++++.+..+.++.|..|+..+ +.+.+++-.+|++++
T Consensus 48 ~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~v~~~Pt~~~ 111 (141)
T 3hxs_A 48 YLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPE-LARDFGIQSIPTIWF 111 (141)
T ss_dssp CCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH-HHHHTTCCSSSEEEE
T ss_pred HhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHH-HHHHcCCCCcCEEEE
Confidence 34789999999888 9999999999999998877789999999887654 556678899999876
No 284
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=96.74 E-value=0.0019 Score=55.45 Aligned_cols=65 Identities=9% Similarity=0.074 Sum_probs=52.5
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
..+||.+.++|.+. |++|+.+.+.+.+++++.+. +.++.|..|+..+ +.+.+++-.+|++++ +|+
T Consensus 27 ~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~~~~-l~~~~~v~~~Pt~~~~~~G~ 94 (114)
T 2oe3_A 27 IKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDESPD-IAKECEVTAMPTFVLGKDGQ 94 (114)
T ss_dssp HHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTCHH-HHHHTTCCSBSEEEEEETTE
T ss_pred HhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHH-HHHHCCCCcccEEEEEeCCe
Confidence 35788999999888 99999999999999887544 8888888877654 555668889999987 554
No 285
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=96.73 E-value=0.0022 Score=52.65 Aligned_cols=63 Identities=14% Similarity=0.211 Sum_probs=51.1
Q ss_pred CCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 505 EGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 505 egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
+||.+.++|.++ |++|+.+.+.+.+++++.+ ++.++.|..|+..+ +.+.+++...|++++ +|+
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~-~~~~~~v~~~Pt~~~~~~g~ 83 (104)
T 2vim_A 18 KGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQNEE-AAAKYSVTAMPTFVFIKDGK 83 (104)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTCHH-HHHHTTCCSSSEEEEEETTE
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEeccCCHH-HHHHcCCccccEEEEEeCCc
Confidence 688888888777 9999999999999987754 68888888887654 555678889999887 553
No 286
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=96.71 E-value=0.0025 Score=57.16 Aligned_cols=60 Identities=15% Similarity=0.009 Sum_probs=48.7
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhh-CCCCEEEEEEecCCchhhhhhcccccccc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANT-ARIPLEMVYVGKSTKRDKCGESWQPLQLK 562 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~ 562 (570)
...||.+.|+|.+. |++|+...+.+.+++++ .+..++++.|+.|..++.++++.+.++++
T Consensus 32 ~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~ 93 (152)
T 2lrt_A 32 DLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWV 93 (152)
T ss_dssp TGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSE
T ss_pred HhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCce
Confidence 35789999999888 99999999999999976 34469999999999888766665544444
No 287
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=96.71 E-value=0.0033 Score=53.56 Aligned_cols=63 Identities=13% Similarity=-0.031 Sum_probs=49.2
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCch----------------------hhhhhccccc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKR----------------------DKCGESWQPL 559 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~----------------------e~~~~~~~~~ 559 (570)
...||.+.|+|.+. |++|+.+.+.+.+++++.+ +++++.|+.|++. ..+.+.+++.
T Consensus 22 ~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~ 100 (136)
T 1zzo_A 22 SLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVT 100 (136)
T ss_dssp GGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCC
T ss_pred HhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCC
Confidence 45788888888777 9999999999999998866 8999999987643 3444555666
Q ss_pred ccccccc
Q 008311 560 QLKSLVT 566 (570)
Q Consensus 560 ~~~~~~~ 566 (570)
.+|++++
T Consensus 101 ~~P~~~~ 107 (136)
T 1zzo_A 101 QQPAYAF 107 (136)
T ss_dssp SSSEEEE
T ss_pred CCceEEE
Confidence 6777655
No 288
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=96.69 E-value=0.0018 Score=54.29 Aligned_cols=64 Identities=13% Similarity=0.222 Sum_probs=49.8
Q ss_pred CCeEEEEEecCC-CchHHHHHHHHHHHHhhC-CCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 505 EGKYIFLYGGDD-VEWVRKFTTAARSVANTA-RIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 505 egk~I~lYfgad-~~w~r~FT~~l~~vy~~~-~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
.||.+.++|.++ |++|+.+.+.+.+++++. ..++.++.|..|...+ +.+.+++-.+|++++ +|+
T Consensus 20 ~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~-~~~~~~v~~~Pt~~~~~~G~ 87 (112)
T 3d6i_A 20 GDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSE-ISELFEISAVPYFIIIHKGT 87 (112)
T ss_dssp TTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHH-HHHHTTCCSSSEEEEEETTE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHH-HHHHcCCCcccEEEEEECCE
Confidence 488999999888 999999999999998762 3458889998887654 455578899999887 564
No 289
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=96.68 E-value=0.00088 Score=58.33 Aligned_cols=63 Identities=13% Similarity=0.135 Sum_probs=51.8
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHH--HHHhhCCCCEEEEEEecC--Cchhhhhhcccc---cccccccc
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAAR--SVANTARIPLEMVYVGKS--TKRDKCGESWQP---LQLKSLVT 566 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~--~vy~~~~~~fEiv~Vs~d--~~~e~~~~~~~~---~~~~~~~~ 566 (570)
.+||.+.|||+++ |++|+.+.+.+. ++++..+.++.++.|..+ +...++.+.+++ ..+|++++
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~ 97 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVV 97 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEE
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccceEEE
Confidence 5799999999999 999999999999 887765557999999883 234456777888 89999875
No 290
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=96.67 E-value=0.003 Score=55.52 Aligned_cols=62 Identities=8% Similarity=0.005 Sum_probs=51.7
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
..||.+.++|.+. |++|+.+.+.+.+++++.+..+.++.|..|+..+ +.+.+++-.+|++++
T Consensus 36 ~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~-l~~~~~v~~~Pt~~~ 98 (136)
T 2l5l_A 36 EGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQE-LAGAFGIRSIPSILF 98 (136)
T ss_dssp CCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH-HHHHTTCCSSCEEEE
T ss_pred cCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCHH-HHHHcCCCCCCEEEE
Confidence 4678889999888 9999999999999998866679999999887654 555568889999875
No 291
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=96.67 E-value=0.0037 Score=53.55 Aligned_cols=63 Identities=11% Similarity=0.040 Sum_probs=50.7
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCc---------------------hhhhhhcccccc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTK---------------------RDKCGESWQPLQ 560 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~---------------------~e~~~~~~~~~~ 560 (570)
...||.+.|+|.+. |++|+.+.+.+.+++++.+ +++++.|+.|++ ...+.+.++...
T Consensus 21 ~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 99 (136)
T 1lu4_A 21 SLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPW 99 (136)
T ss_dssp GGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCS
T ss_pred HhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCC
Confidence 45789888888777 9999999999999998866 899999998874 344555567777
Q ss_pred cccccc
Q 008311 561 LKSLVT 566 (570)
Q Consensus 561 ~~~~~~ 566 (570)
+|++++
T Consensus 100 ~P~~~l 105 (136)
T 1lu4_A 100 QPAFVF 105 (136)
T ss_dssp SSEEEE
T ss_pred CCEEEE
Confidence 787654
No 292
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=96.66 E-value=0.0017 Score=57.51 Aligned_cols=65 Identities=8% Similarity=-0.006 Sum_probs=54.0
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
..++.+.++|.+. |++|+.|.+.+.+++++.+..+.++.|..|+..+ +.+.+++-.+|++++ +|+
T Consensus 22 ~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~-l~~~~~v~~~Pt~~~~~~G~ 89 (140)
T 3hz4_A 22 DSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPW-TAEKYGVQGTPTFKFFCHGR 89 (140)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHH-HHHHHTCCEESEEEEEETTE
T ss_pred hCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHh-HHHHCCCCcCCEEEEEeCCc
Confidence 3588899999888 9999999999999998766679999999887654 556678899999987 554
No 293
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=96.66 E-value=0.0044 Score=55.12 Aligned_cols=54 Identities=13% Similarity=-0.037 Sum_probs=45.8
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhh-CCCCEEEEEEecCCchhhhhhcc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANT-ARIPLEMVYVGKSTKRDKCGESW 556 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d~~~e~~~~~~ 556 (570)
...||.+.|+|.+. |++|+.+.+.+.+++++ .+..++++.|+.|++.+.+++++
T Consensus 31 ~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~ 86 (165)
T 3or5_A 31 SLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYM 86 (165)
T ss_dssp GGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHH
T ss_pred HcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHH
Confidence 45899999999777 99999999999999976 34569999999998887777663
No 294
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=96.65 E-value=0.0013 Score=53.02 Aligned_cols=61 Identities=15% Similarity=0.139 Sum_probs=48.4
Q ss_pred EEEEecCCCchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhccccccccccccCCC
Q 008311 509 IFLYGGDDVEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVTSGK 569 (570)
Q Consensus 509 I~lYfgad~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~~~~ 569 (570)
+-+|.+..|++|+...+.+.++.++.+.+++++-|..|....+.-+-++...+|+++++|+
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i~g~ 64 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDKARIAEAEKAGVKSVPALVIDGA 64 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCSSTHHHHHHHTCCEEEEEEETTE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCChhhHHHHHHcCCCcCCEEEECCE
Confidence 5677777799999999999998877788899988887632333334568899999999886
No 295
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=96.65 E-value=0.0042 Score=54.47 Aligned_cols=55 Identities=9% Similarity=0.134 Sum_probs=45.6
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHH---HHhh-CCCCEEEEEEecCCchhhhhhccc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARS---VANT-ARIPLEMVYVGKSTKRDKCGESWQ 557 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~---vy~~-~~~~fEiv~Vs~d~~~e~~~~~~~ 557 (570)
...||++.|+|-+. |++|+...+.+.+ +|++ .+..++++.|+.|++.+.+++.++
T Consensus 28 ~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~ 87 (142)
T 3eur_A 28 QFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRN 87 (142)
T ss_dssp TCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGG
T ss_pred HcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHH
Confidence 45789999999777 9999999999999 8875 457899999999998777554433
No 296
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=96.63 E-value=0.005 Score=54.61 Aligned_cols=47 Identities=19% Similarity=0.142 Sum_probs=40.3
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhC-CCCEEEEEEecCCch
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTA-RIPLEMVYVGKSTKR 549 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~-~~~fEiv~Vs~d~~~ 549 (570)
...||.+.|+|.+. |++|+...+.+.+++++. +..++++.|+.|.+.
T Consensus 26 ~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~ 74 (152)
T 2lrn_A 26 DFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRRE 74 (152)
T ss_dssp GGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCH
T ss_pred HcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCH
Confidence 45899999999887 999999999999999763 456999999999764
No 297
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=96.62 E-value=0.0025 Score=54.28 Aligned_cols=63 Identities=10% Similarity=0.056 Sum_probs=51.1
Q ss_pred CCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 505 EGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 505 egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
+||.+.++|.++ |++|+.+.+.+.+++++.+. +.++.|..|+..+ +.+.+++-.+|++++ +|+
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~-~~~~~~v~~~Pt~~~~~~G~ 98 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDELKP-IAEQFSVEAMPTFLFMKEGD 98 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHH-HHHHTTCCSSSEEEEEETTE
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCCCHH-HHHHcCCCcccEEEEEeCCE
Confidence 588888888888 99999999999999877443 8888888887554 555678889999887 554
No 298
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=96.62 E-value=0.004 Score=54.78 Aligned_cols=64 Identities=11% Similarity=0.104 Sum_probs=51.5
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhC-CCCEEEEEEecCCchh----------------------hhhhcccc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTA-RIPLEMVYVGKSTKRD----------------------KCGESWQP 558 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~-~~~fEiv~Vs~d~~~e----------------------~~~~~~~~ 558 (570)
...||.+.|+|.+. |++|+.+.+.+.+++++. +..+.++.|+.|...+ ++.+.+++
T Consensus 27 ~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (152)
T 2lja_A 27 DLKGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLI 106 (152)
T ss_dssp TTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTC
T ss_pred HcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCc
Confidence 45789999999887 999999999999999874 4579999999988764 45556667
Q ss_pred cccccccc
Q 008311 559 LQLKSLVT 566 (570)
Q Consensus 559 ~~~~~~~~ 566 (570)
..+|++++
T Consensus 107 ~~~P~~~l 114 (152)
T 2lja_A 107 NGIPRFIL 114 (152)
T ss_dssp CSSCCEEE
T ss_pred CCCCEEEE
Confidence 77777655
No 299
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=96.60 E-value=0.0029 Score=52.75 Aligned_cols=61 Identities=7% Similarity=-0.101 Sum_probs=50.5
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
.+||.+.++|.+. |++|+.+.+.+.+++++. .++.++.|..|+..+ +.+.+++..+|++++
T Consensus 19 ~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~~vd~~~~~~-~~~~~~v~~~Pt~~~ 80 (107)
T 1gh2_A 19 AGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY-PQAVFLEVDVHQCQG-TAATNNISATPTFQF 80 (107)
T ss_dssp TTTSCEEEEEECSSCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTSHH-HHHHTTCCSSSEEEE
T ss_pred CCCCEEEEEEECCCChhhHHHHHHHHHHHHHC-CCcEEEEEECccCHH-HHHhcCCCcccEEEE
Confidence 3688999999888 999999999999998875 368888888887554 556678889999876
No 300
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=96.59 E-value=0.0035 Score=54.17 Aligned_cols=62 Identities=10% Similarity=0.044 Sum_probs=50.3
Q ss_pred CCeEEEEEecCC-CchHHHHHHHHHHHHhhCC-CCEEEEEEecCC------------------------chhhhhhcccc
Q 008311 505 EGKYIFLYGGDD-VEWVRKFTTAARSVANTAR-IPLEMVYVGKST------------------------KRDKCGESWQP 558 (570)
Q Consensus 505 egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~-~~fEiv~Vs~d~------------------------~~e~~~~~~~~ 558 (570)
.||.+.|+|.+. |++|+.+.+.+.+++++.+ .+++++.|+.|. +...+.+.+++
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 112 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHI 112 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCc
Confidence 889999999777 9999999999999998744 789999999875 23456667777
Q ss_pred cccccccc
Q 008311 559 LQLKSLVT 566 (570)
Q Consensus 559 ~~~~~~~~ 566 (570)
..+|++++
T Consensus 113 ~~~P~~~l 120 (145)
T 3erw_A 113 ITIPTSFL 120 (145)
T ss_dssp CEESEEEE
T ss_pred CccCeEEE
Confidence 78887543
No 301
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=96.59 E-value=0.0024 Score=53.76 Aligned_cols=63 Identities=11% Similarity=0.113 Sum_probs=51.2
Q ss_pred CCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 505 EGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 505 egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
+||.+.++|.++ |++|+.+.+.+.+++++.+ ++.++.|..|+.. .+.+.+++-..|++++ +|+
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~-~~~~~~~v~~~Pt~~~~~~g~ 92 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVDELK-DVAEAYNVEAMPTFLFIKDGE 92 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSH-HHHHHTTCCSBSEEEEEETTE
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEcccCH-HHHHHcCCCcCcEEEEEeCCe
Confidence 588888888888 9999999999999988754 6888888887654 4556678889999987 664
No 302
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=96.58 E-value=0.0025 Score=49.88 Aligned_cols=56 Identities=18% Similarity=0.147 Sum_probs=44.9
Q ss_pred EEEEecCCCchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhccccccccccccCCC
Q 008311 509 IFLYGGDDVEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVTSGK 569 (570)
Q Consensus 509 I~lYfgad~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~~~~ 569 (570)
|-+|. ..|++|+.+.+.+.+++++.+.+++++.|. ..+..+.+++..+|+++++|+
T Consensus 4 v~f~a-~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~----~~~~~~~~~v~~~Pt~~~~G~ 59 (77)
T 1ilo_A 4 IQIYG-TGCANCQMLEKNAREAVKELGIDAEFEKIK----EMDQILEAGLTALPGLAVDGE 59 (77)
T ss_dssp EEEEC-SSSSTTHHHHHHHHHHHHHTTCCEEEEEEC----SHHHHHHHTCSSSSCEEETTE
T ss_pred EEEEc-CCChhHHHHHHHHHHHHHHcCCceEEEEec----CHHHHHHCCCCcCCEEEECCE
Confidence 33443 359999999999999998877789988887 345566778999999999885
No 303
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=96.55 E-value=0.0028 Score=54.99 Aligned_cols=64 Identities=6% Similarity=-0.010 Sum_probs=50.3
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCC--------------------------chhhhhhc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKST--------------------------KRDKCGES 555 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~--------------------------~~e~~~~~ 555 (570)
...||.+.|+|.+. |++|+.+.+.+.+++++.+..++++.|+.|. ...++.+.
T Consensus 26 ~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 105 (148)
T 2b5x_A 26 LIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDA 105 (148)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHH
T ss_pred hcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHHH
Confidence 45788888888777 9999999999999998744449999998653 23466677
Q ss_pred ccccccccccc
Q 008311 556 WQPLQLKSLVT 566 (570)
Q Consensus 556 ~~~~~~~~~~~ 566 (570)
+++..+|++++
T Consensus 106 ~~v~~~P~~~l 116 (148)
T 2b5x_A 106 FENEYVPAYYV 116 (148)
T ss_dssp TCCCCSSEEEE
T ss_pred hCCCCCCEEEE
Confidence 78888888765
No 304
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=96.53 E-value=0.0037 Score=54.42 Aligned_cols=54 Identities=15% Similarity=0.158 Sum_probs=43.7
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHH---HHhh-CCCCEEEEEEecCCchhhhhhcc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARS---VANT-ARIPLEMVYVGKSTKRDKCGESW 556 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~---vy~~-~~~~fEiv~Vs~d~~~e~~~~~~ 556 (570)
...||.+.|+|.+. |++|+...+.+.+ ++++ .+..++++.|+.|.+.+.+++.+
T Consensus 24 ~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~ 82 (142)
T 3ewl_A 24 RLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKA 82 (142)
T ss_dssp GCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHH
T ss_pred hcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHH
Confidence 45799999999888 9999999998887 7754 34569999999998877765443
No 305
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.52 E-value=0.0019 Score=56.49 Aligned_cols=66 Identities=9% Similarity=0.178 Sum_probs=52.4
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhC---CCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTA---RIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~---~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
+.++|.+.|+|.+. |++|+.+.+.+.+++++. +.++.++.|..++.. .+.+.+++-.+|++++ +|+
T Consensus 31 ~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~~~~~v~~~Pt~~~~~~G~ 102 (140)
T 2dj1_A 31 VADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSAS-MLASKFDVSGYPTIKILKKGQ 102 (140)
T ss_dssp HTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCH-HHHHHTTCCSSSEEEEEETTE
T ss_pred HhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccH-HHHHHCCCCccCeEEEEECCc
Confidence 45789999999988 999999999999998652 335888888877664 4555678889999887 553
No 306
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=96.51 E-value=0.0042 Score=55.77 Aligned_cols=61 Identities=11% Similarity=0.082 Sum_probs=51.8
Q ss_pred CCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 505 EGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 505 egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
.|+.+.++|.+. |++|+.+.|.+.+++++.+..+.++.|.-|... .+.+.+++..+|++++
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~-~~~~~~~i~~~Pt~~~ 83 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVP-DFNKMYELYDPCTVMF 83 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCC-TTTTSSCSCSSCEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCH-HHHHHcCCCCCCEEEE
Confidence 589999999999 999999999999999876667999999888654 4566678889999864
No 307
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=96.51 E-value=0.0032 Score=53.48 Aligned_cols=62 Identities=6% Similarity=0.090 Sum_probs=50.8
Q ss_pred CCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 505 EGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 505 egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
.||.+.++|.++ |++|+.+.+.+.+++++. ++.++.|..|+..+ +.+.+++-..|++++ +|+
T Consensus 32 ~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~~~~~-~~~~~~v~~~Pt~~~~~~G~ 96 (117)
T 2xc2_A 32 KNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVDKLEE-TARKYNISAMPTFIAIKNGE 96 (117)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETTTSHH-HHHHTTCCSSSEEEEEETTE
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECCccHH-HHHHcCCCccceEEEEeCCc
Confidence 688899999888 999999999999998765 77888888776544 555678889999887 564
No 308
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=96.50 E-value=0.007 Score=51.20 Aligned_cols=41 Identities=15% Similarity=0.020 Sum_probs=37.4
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEE
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYV 543 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~V 543 (570)
...||.+.|||.+. |++|+...+.+.+++++.+..+.++.|
T Consensus 19 ~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i 60 (138)
T 4evm_A 19 DYKGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTV 60 (138)
T ss_dssp GGTTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEE
T ss_pred HhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 45899999999888 999999999999999887888999999
No 309
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=96.50 E-value=0.0046 Score=54.33 Aligned_cols=51 Identities=14% Similarity=0.026 Sum_probs=41.8
Q ss_pred cccCCeEEEEEecCC-CchHHHHHHHHHHHHhh-CCCCEEEEEEecCCchhhh
Q 008311 502 WIKEGKYIFLYGGDD-VEWVRKFTTAARSVANT-ARIPLEMVYVGKSTKRDKC 552 (570)
Q Consensus 502 ~~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d~~~e~~ 552 (570)
....||.+.|||.+. |++|+.+.+.+.+++++ .+..++++.|+.|.+.+..
T Consensus 24 ~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~ 76 (152)
T 3gl3_A 24 SDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDA 76 (152)
T ss_dssp GGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHH
T ss_pred HHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHH
Confidence 346899999988777 99999999999999876 3445999999999776543
No 310
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=96.48 E-value=0.0059 Score=54.06 Aligned_cols=46 Identities=13% Similarity=-0.046 Sum_probs=40.6
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhh-CCCCEEEEEEecCCc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANT-ARIPLEMVYVGKSTK 548 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d~~ 548 (570)
...||.+.|+|.+. |++|+...+.+.+++++ .+..++++.|+.|++
T Consensus 21 ~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~ 68 (151)
T 3raz_A 21 SLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTS 68 (151)
T ss_dssp GCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCH
T ss_pred HhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCh
Confidence 46899999999888 99999999999999987 467899999999753
No 311
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=96.48 E-value=0.0037 Score=55.50 Aligned_cols=63 Identities=8% Similarity=0.049 Sum_probs=53.9
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
+..||.+.|+|.++ |++|+.+.+.+.+++++.+.++.++.|..|+..+ +.+.+++..+|++++
T Consensus 52 ~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~-l~~~~~v~~~Pt~~~ 115 (148)
T 3p2a_A 52 LQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPA-LSTRFRIRSIPTIML 115 (148)
T ss_dssp TTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH-HHHHTTCCSSSEEEE
T ss_pred HhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCHH-HHHHCCCCccCEEEE
Confidence 46789999999888 9999999999999998877779999998887654 556678999999876
No 312
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=96.48 E-value=0.0037 Score=52.87 Aligned_cols=65 Identities=9% Similarity=0.102 Sum_probs=51.5
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
+.+++.+.++|.+. |++|+.+.+.+.+++++.+ ++.++.|..++..+ +.+.+++-.+|++++ +|+
T Consensus 16 ~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~~~~-l~~~~~v~~~Pt~~~~~~G~ 83 (110)
T 2l6c_A 16 FEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-QVAISSVDSEARPE-LMKELGFERVPTLVFIRDGK 83 (110)
T ss_dssp HTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-TSCEEEEEGGGCHH-HHHHTTCCSSCEEEEEESSS
T ss_pred HHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-CcEEEEEcCcCCHH-HHHHcCCcccCEEEEEECCE
Confidence 45678888888888 9999999999999987643 67778887766544 555678889999987 775
No 313
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=96.46 E-value=0.0051 Score=53.27 Aligned_cols=62 Identities=13% Similarity=0.098 Sum_probs=50.8
Q ss_pred CCeEEEEEecC--------CCchHHHHHHHHHHHHhhCCCCEEEEEEecC------Cchhhhhhcccccccccccc
Q 008311 505 EGKYIFLYGGD--------DVEWVRKFTTAARSVANTARIPLEMVYVGKS------TKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 505 egk~I~lYfga--------d~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d------~~~e~~~~~~~~~~~~~~~~ 566 (570)
.||.+.++|.+ -|++|+.+.|.+.+++++.+.++.++.|.-+ ++...+.+.+++-.+|++++
T Consensus 23 ~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~~~~~i~~~Pt~~~ 98 (123)
T 1wou_A 23 NGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFRKNLKVTAVPTLLK 98 (123)
T ss_dssp TTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHHHHHCCCSSSEEEE
T ss_pred CCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHHHHCCCCeeCEEEE
Confidence 37888888855 4999999999999999886668999999885 44556777789999999875
No 314
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=95.45 E-value=0.00048 Score=59.64 Aligned_cols=65 Identities=11% Similarity=0.175 Sum_probs=53.6
Q ss_pred cccCCeEEEEEecCC-CchHHHHHHHH---HHHHhhCCCCEEEEEEecCC-chhhhhhcccccccccccc
Q 008311 502 WIKEGKYIFLYGGDD-VEWVRKFTTAA---RSVANTARIPLEMVYVGKST-KRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 502 ~~~egk~I~lYfgad-~~w~r~FT~~l---~~vy~~~~~~fEiv~Vs~d~-~~e~~~~~~~~~~~~~~~~ 566 (570)
...+||.+.|||.+. |++|+.+.+.+ .++++..+.++.++.|..|+ ....+.+.+++-.+|++++
T Consensus 15 ~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~ 84 (130)
T 2lst_A 15 AQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPTFVF 84 (130)
Confidence 356899999999999 99999999998 78877666678888888764 3456778889999999877
No 315
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=96.41 E-value=0.0092 Score=53.31 Aligned_cols=64 Identities=9% Similarity=0.142 Sum_probs=52.3
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhC-CCCEEEEEEecCCc------------------hhhhhhcccccccc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTA-RIPLEMVYVGKSTK------------------RDKCGESWQPLQLK 562 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~-~~~fEiv~Vs~d~~------------------~e~~~~~~~~~~~~ 562 (570)
...||.+.|||.+. |++|+...+.+.+++++. +..++++.|+.|.. ...+.+.+++..+|
T Consensus 38 ~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P 117 (158)
T 3hdc_A 38 QYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLP 117 (158)
T ss_dssp GGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSS
T ss_pred HhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCcc
Confidence 45799999999777 999999999999999874 47899999999872 44677777888888
Q ss_pred c-ccc
Q 008311 563 S-LVT 566 (570)
Q Consensus 563 ~-~~~ 566 (570)
+ +++
T Consensus 118 ~~~li 122 (158)
T 3hdc_A 118 DTFIV 122 (158)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 8 444
No 316
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=96.39 E-value=0.0047 Score=52.60 Aligned_cols=62 Identities=6% Similarity=-0.152 Sum_probs=51.3
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
..+|.+.++|.++ |++|+.+.+.+.+++++.+.++.++.|..++..+ +.+.+++-.+|++++
T Consensus 19 ~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~-~~~~~~v~~~Pt~~~ 81 (122)
T 3aps_A 19 QGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQ-TCQKAGIKAYPSVKL 81 (122)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHH-HHHHTTCCSSSEEEE
T ss_pred cCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHH-HHHHcCCCccceEEE
Confidence 4678899999888 9999999999999988765578999998887654 455578888999875
No 317
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=96.36 E-value=0.0021 Score=55.40 Aligned_cols=65 Identities=8% Similarity=0.021 Sum_probs=51.9
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCC-CEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARI-PLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~-~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
.+||.+.++|.++ |++|+.+.+.+.+++++... ++.++.|..|+..+ +.+.+++-..|++++ +|+
T Consensus 31 ~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~-~~~~~~v~~~Pt~~~~~~G~ 99 (121)
T 2j23_A 31 GGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQ-IAQEVGIRAMPTFVFFKNGQ 99 (121)
T ss_dssp SSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHH-HHHHHTCCSSSEEEEEETTE
T ss_pred cCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHH-HHHHcCCCcccEEEEEECCe
Confidence 5788899999888 99999999999999876433 48899999887654 555667889999887 553
No 318
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=96.36 E-value=0.0068 Score=50.20 Aligned_cols=63 Identities=10% Similarity=0.107 Sum_probs=50.7
Q ss_pred CeEEEEEecCC-CchHHHHHHHHHHHHhhCC---CCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 506 GKYIFLYGGDD-VEWVRKFTTAARSVANTAR---IPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 506 gk~I~lYfgad-~~w~r~FT~~l~~vy~~~~---~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
++.+.++|.+. |++|+.+.+.+.+++++.. ..+.++.|..++..+ +.+.+++-.+|++++ +|+
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~-l~~~~~v~~~Pt~~~~~~g~ 89 (111)
T 3uvt_A 21 EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERN-ICSKYSVRGYPTLLLFRGGK 89 (111)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHH-HHHHTTCCSSSEEEEEETTE
T ss_pred CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHh-HHHhcCCCcccEEEEEeCCc
Confidence 77888888888 9999999999999987632 578888898886654 556678889999887 553
No 319
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.36 E-value=0.0039 Score=53.69 Aligned_cols=62 Identities=3% Similarity=-0.012 Sum_probs=50.4
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCC----CCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTAR----IPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~----~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
..++.+.++|.+. |++|+.+.+.+.+++++.+ ..+.++.|..++..+ +.+.+++-.+|++++
T Consensus 23 ~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~-l~~~~~v~~~Pt~~~ 89 (133)
T 1x5d_A 23 DSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQV-LASRYGIRGFPTIKI 89 (133)
T ss_dssp TSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCH-HHHHHTCCSSSEEEE
T ss_pred cCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHH-HHHhCCCCeeCeEEE
Confidence 4578999999888 9999999999999987643 679999998887654 445568888999876
No 320
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=96.32 E-value=0.0046 Score=54.11 Aligned_cols=64 Identities=14% Similarity=0.137 Sum_probs=52.7
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
..++.+.++|.+. |++|+.+.+.+.+++++.+ ++.++.|..|...+ +.+.+++-.+|++++ +|+
T Consensus 35 ~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~d~~~~-l~~~~~v~~~Pt~~i~~~G~ 101 (125)
T 1r26_A 35 SEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP-TVKFAKVDADNNSE-IVSKCRVLQLPTFIIARSGK 101 (125)
T ss_dssp HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT-TSEEEEEETTTCHH-HHHHTTCCSSSEEEEEETTE
T ss_pred ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECCCCHH-HHHHcCCCcccEEEEEeCCe
Confidence 5788999999888 9999999999999988753 58888998887654 455578889999987 664
No 321
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=96.30 E-value=0.007 Score=50.72 Aligned_cols=23 Identities=9% Similarity=0.289 Sum_probs=16.8
Q ss_pred HHHHHhCCCCCCceEEEECCCCcEEc
Q 008311 430 RYVKDVWHFKNKPILVVLDPQGRVVS 455 (570)
Q Consensus 430 ~~L~~~y~V~~IPtlVVLDpqGkVv~ 455 (570)
..+.+.+++.++|++++ +|+.+.
T Consensus 58 ~~l~~~~g~~~vP~i~~---~g~~i~ 80 (105)
T 1kte_A 58 DYLQQLTGARTVPRVFI---GKECIG 80 (105)
T ss_dssp HHHHHHHSCCCSCEEEE---TTEEEE
T ss_pred HHHHHHhCCCCcCeEEE---CCEEEe
Confidence 34667789999999754 677764
No 322
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=96.29 E-value=0.012 Score=51.84 Aligned_cols=64 Identities=11% Similarity=0.106 Sum_probs=50.4
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhC-CCCEEEEEEecCCc-hhh---------------------hhhcccc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTA-RIPLEMVYVGKSTK-RDK---------------------CGESWQP 558 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~-~~~fEiv~Vs~d~~-~e~---------------------~~~~~~~ 558 (570)
...||.+.|+|.+. |++|+...+.+.+++++. +..++++.|+.|.. .+. +.+.+++
T Consensus 25 ~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 104 (154)
T 3kcm_A 25 DLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGT 104 (154)
T ss_dssp GGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTC
T ss_pred hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCC
Confidence 45889999988777 999999999999999874 45899999999986 332 5556677
Q ss_pred cccc-cccc
Q 008311 559 LQLK-SLVT 566 (570)
Q Consensus 559 ~~~~-~~~~ 566 (570)
..+| ++++
T Consensus 105 ~~~P~~~li 113 (154)
T 3kcm_A 105 TGVPETFVI 113 (154)
T ss_dssp CSBCEEEEE
T ss_pred CCCCeEEEE
Confidence 7777 4454
No 323
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=96.28 E-value=0.0058 Score=53.07 Aligned_cols=48 Identities=8% Similarity=0.080 Sum_probs=41.1
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhC--CCCEEEEEEecCCchh
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTA--RIPLEMVYVGKSTKRD 550 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~--~~~fEiv~Vs~d~~~e 550 (570)
...||.+.|+|.+. |++|+...+.+.+++++. +..++++.|+.|.+.+
T Consensus 30 ~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~ 80 (148)
T 3fkf_A 30 RFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDRE 80 (148)
T ss_dssp TTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHH
T ss_pred ccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHH
Confidence 45899999999877 999999999999999874 4559999999987653
No 324
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=96.27 E-value=0.0071 Score=54.23 Aligned_cols=43 Identities=7% Similarity=0.022 Sum_probs=38.8
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecC
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKS 546 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d 546 (570)
...||.+.|+|.+. |++|+.+.+.+.+++++.+ .++++.|+.|
T Consensus 34 ~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d 77 (165)
T 3ha9_A 34 NVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDFW 77 (165)
T ss_dssp GCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEECC
T ss_pred HhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEEec
Confidence 45899999988777 9999999999999998867 9999999998
No 325
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=96.27 E-value=0.0079 Score=52.98 Aligned_cols=63 Identities=16% Similarity=0.060 Sum_probs=49.8
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhC-CCCEEEEEEecCCch---------------------hhhhhccccc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTA-RIPLEMVYVGKSTKR---------------------DKCGESWQPL 559 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~-~~~fEiv~Vs~d~~~---------------------e~~~~~~~~~ 559 (570)
...||.+.|||.+. |++|+.+.+.+.+++++. +.+++++.|+.|.+. ..+.+.+++.
T Consensus 23 ~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 102 (151)
T 2f9s_A 23 DLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVS 102 (151)
T ss_dssp GGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCC
T ss_pred HcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCC
Confidence 45799999999877 999999999999998763 447999999998754 3455566777
Q ss_pred cccccc
Q 008311 560 QLKSLV 565 (570)
Q Consensus 560 ~~~~~~ 565 (570)
.+|+++
T Consensus 103 ~~P~~~ 108 (151)
T 2f9s_A 103 PLPTTF 108 (151)
T ss_dssp SSCEEE
T ss_pred CCCeEE
Confidence 778743
No 326
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=96.26 E-value=0.0027 Score=55.23 Aligned_cols=54 Identities=11% Similarity=-0.023 Sum_probs=43.8
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhC-CCCEEEEEEecCCchhhhhhcc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTA-RIPLEMVYVGKSTKRDKCGESW 556 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~-~~~fEiv~Vs~d~~~e~~~~~~ 556 (570)
...||.+.|||.+. |++|+...+.+.+++++. +..++++.|+.|++.+.+++.+
T Consensus 28 ~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~ 83 (148)
T 3hcz_A 28 DVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFI 83 (148)
T ss_dssp GCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHH
T ss_pred HcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHH
Confidence 45899999999877 999999999999998763 3469999999997776544433
No 327
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=96.25 E-value=0.0061 Score=52.40 Aligned_cols=60 Identities=7% Similarity=0.065 Sum_probs=50.7
Q ss_pred CCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 505 EGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 505 egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
.||.+.++|.+. |++|+.+.+.+.+++++. ..+.++.|..|+..+ +.+.+++-.+|++++
T Consensus 22 ~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~~~~-~~~~~~i~~~Pt~~~ 82 (118)
T 2f51_A 22 APGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDKNGN-AADAYGVSSIPALFF 82 (118)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTCHH-HHHHTTCCSSSEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCCCHH-HHHhcCCCCCCEEEE
Confidence 588899999888 999999999999998876 678899998887654 556678889999876
No 328
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.23 E-value=0.0073 Score=52.15 Aligned_cols=61 Identities=5% Similarity=0.046 Sum_probs=49.2
Q ss_pred CCeEEEEEecCC-CchHHHHHHHHHHHHhhCC--CCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 505 EGKYIFLYGGDD-VEWVRKFTTAARSVANTAR--IPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 505 egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~--~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
.+|.+.++|.+. |++|+.+.+.+.+++++.. ..+.++.|..++.. .+.+.+++..+|++++
T Consensus 24 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~-~~~~~~~v~~~Pt~~~ 87 (133)
T 2dj3_A 24 PKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATAND-ITNDQYKVEGFPTIYF 87 (133)
T ss_dssp TTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSC-CCCSSCCCSSSSEEEE
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCH-HHHhhcCCCcCCEEEE
Confidence 589999999998 9999999999999987633 56888888776654 3445678889999875
No 329
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=96.23 E-value=0.0071 Score=53.45 Aligned_cols=55 Identities=5% Similarity=0.044 Sum_probs=45.6
Q ss_pred ccCCeEEEEEecCC-Cch--HHHHHHHHHHHHhh--CCCCEEEEEEecCCchhhhhhccc
Q 008311 503 IKEGKYIFLYGGDD-VEW--VRKFTTAARSVANT--ARIPLEMVYVGKSTKRDKCGESWQ 557 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w--~r~FT~~l~~vy~~--~~~~fEiv~Vs~d~~~e~~~~~~~ 557 (570)
...||.+.|+|.+. |++ |+...+.+.+++++ .+..++++.|+.|++.+.++++++
T Consensus 30 ~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~ 89 (150)
T 3fw2_A 30 AFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIK 89 (150)
T ss_dssp TTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHH
T ss_pred hhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHH
Confidence 45799999999777 999 99999999999976 445699999999988765555444
No 330
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=96.20 E-value=0.0086 Score=54.13 Aligned_cols=62 Identities=11% Similarity=0.016 Sum_probs=52.5
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
.++|.+.++|.+. |++|+.+.|.+.+++++.+..+.++.|.-|... ++.+.+++..+|++++
T Consensus 21 ~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~-~l~~~~~v~~~Pt~~~ 83 (149)
T 3gix_A 21 TAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTA-VYTQYFDISYIPSTVF 83 (149)
T ss_dssp CCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCC-HHHHHTTCCSSSEEEE
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCH-HHHHHcCCCccCeEEE
Confidence 3689999999999 999999999999999876666999999887654 4566678889999875
No 331
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=96.19 E-value=0.022 Score=45.26 Aligned_cols=16 Identities=13% Similarity=0.059 Sum_probs=13.6
Q ss_pred EEEEecCCCHHhHHHH
Q 008311 350 LLLISDLDISQEELSI 365 (570)
Q Consensus 350 lL~FwAsWCpPCr~e~ 365 (570)
++.||++|||+|+...
T Consensus 3 v~~f~~~~C~~C~~~~ 18 (81)
T 1h75_A 3 ITIYTRNDCVQCHATK 18 (81)
T ss_dssp EEEEECTTCHHHHHHH
T ss_pred EEEEcCCCChhHHHHH
Confidence 4569999999999865
No 332
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=96.18 E-value=0.0098 Score=52.24 Aligned_cols=63 Identities=13% Similarity=0.020 Sum_probs=50.9
Q ss_pred CCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 505 EGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 505 egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
.++ +.++|.+. |++|+.|.+.+.+++++.+.++.++.|..|+..+ +.+.+++..+|++++ +|+
T Consensus 50 ~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~-l~~~~~v~~~Pt~~~~~~G~ 115 (140)
T 1v98_A 50 APL-TLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHPG-LAARYGVRSVPTLVLFRRGA 115 (140)
T ss_dssp CCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHH-HHHHTTCCSSSEEEEEETTE
T ss_pred CCC-EEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCCHH-HHHHCCCCccCEEEEEeCCc
Confidence 345 77888777 9999999999999998766679999999887654 556678889999887 664
No 333
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=96.17 E-value=0.0028 Score=54.60 Aligned_cols=63 Identities=10% Similarity=0.043 Sum_probs=50.7
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHH---HHHHhhCCCCEEEEEEecCC-chhhhhhcccccccccccc
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAA---RSVANTARIPLEMVYVGKST-KRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l---~~vy~~~~~~fEiv~Vs~d~-~~e~~~~~~~~~~~~~~~~ 566 (570)
.+||.+.|+|.+. |++|+.+.+.+ .++.+..+..+.++-|..++ ....+.+.+++-.+|++++
T Consensus 25 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~ 92 (130)
T 2kuc_A 25 VEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAYPTLLF 92 (130)
T ss_dssp HHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCCSSCEEEE
T ss_pred hcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCCCCCEEEE
Confidence 4789999999888 99999999988 56655444567778887775 4567888889999999986
No 334
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=95.16 E-value=0.00084 Score=58.43 Aligned_cols=53 Identities=19% Similarity=0.226 Sum_probs=43.5
Q ss_pred cCCe-EEEEEecCC-CchHHHHHHHHHHHHhhC---CCCEEEEEEecCCchhhhhhcc
Q 008311 504 KEGK-YIFLYGGDD-VEWVRKFTTAARSVANTA---RIPLEMVYVGKSTKRDKCGESW 556 (570)
Q Consensus 504 ~egk-~I~lYfgad-~~w~r~FT~~l~~vy~~~---~~~fEiv~Vs~d~~~e~~~~~~ 556 (570)
..|| .+.|||.+. |++|+.+.+.+.+++++. +.++++++|+.|++.+.+++++
T Consensus 23 ~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~ 80 (143)
T 2lus_A 23 LKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYM 80 (143)
Confidence 5788 999999888 999999999999998763 4689999999997765444433
No 335
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=96.15 E-value=0.0063 Score=55.34 Aligned_cols=65 Identities=6% Similarity=0.068 Sum_probs=53.7
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
..|+.+.+||.+. |++|+.|.+.+.+++++....+.++.|..|+..+ +.+-+++-.+|++++ +|+
T Consensus 62 ~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~~-l~~~~~i~~~Pt~~~~~~G~ 129 (155)
T 2ppt_A 62 RDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPA-VAGRHRIQGIPAFILFHKGR 129 (155)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTSTH-HHHHTTCCSSSEEEEEETTE
T ss_pred hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccHH-HHHHcCCCcCCEEEEEeCCe
Confidence 5688899999888 9999999999999998755569999998887654 555678889999887 564
No 336
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=96.14 E-value=0.0068 Score=54.51 Aligned_cols=62 Identities=5% Similarity=0.046 Sum_probs=51.5
Q ss_pred CeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 506 GKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 506 gk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
||.+.++|.+. |++|+.+.+.+.+++++. .++.++.|..|+..+ +.+.+++..+|++++ +|+
T Consensus 32 ~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~~v~~~~vd~~~~~~-l~~~~~v~~~Pt~~~~~~G~ 96 (153)
T 2wz9_A 32 KSLLVVHFWAPWAPQCAQMNEVMAELAKEL-PQVSFVKLEAEGVPE-VSEKYEISSVPTFLFFKNSQ 96 (153)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTSHH-HHHHTTCCSSSEEEEEETTE
T ss_pred CCeEEEEEECCCCHhHHHHHHHHHHHHHHc-CCeEEEEEECCCCHH-HHHHcCCCCCCEEEEEECCE
Confidence 88899999888 999999999999998774 468888888877654 555678999999987 664
No 337
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=96.14 E-value=0.0068 Score=52.35 Aligned_cols=24 Identities=13% Similarity=0.151 Sum_probs=17.8
Q ss_pred HHHHHHhCCCCCCceEEEECCCCcEEc
Q 008311 429 IRYVKDVWHFKNKPILVVLDPQGRVVS 455 (570)
Q Consensus 429 ~~~L~~~y~V~~IPtlVVLDpqGkVv~ 455 (570)
...+.+.++++++|++++ +|+.+.
T Consensus 64 ~~~l~~~~g~~~vP~v~i---~g~~ig 87 (114)
T 2hze_A 64 RDYFEQITGGKTVPRIFF---GKTSIG 87 (114)
T ss_dssp HHHHHHHHSCCSSCEEEE---TTEEEE
T ss_pred HHHHHHHhCCCCcCEEEE---CCEEEe
Confidence 345777889999998754 587764
No 338
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=96.14 E-value=0.0059 Score=51.74 Aligned_cols=59 Identities=3% Similarity=0.004 Sum_probs=47.3
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCC-----CEEEEEEecCCchhhhhhcccccccccccc
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARI-----PLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~-----~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
..++.+.++|.+. |++|+.|.+.+.+++++.+. .+.++.|..++.. +.+ ++-.+|++++
T Consensus 23 ~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~--~~~--~v~~~Pt~~~ 87 (121)
T 2djj_A 23 DDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND--VPD--EIQGFPTIKL 87 (121)
T ss_dssp CTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC--CSS--CCSSSSEEEE
T ss_pred cCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc--ccc--ccCcCCeEEE
Confidence 4789999999888 99999999999999876433 7888888877654 444 7788888765
No 339
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=96.13 E-value=0.011 Score=50.45 Aligned_cols=60 Identities=5% Similarity=-0.011 Sum_probs=49.0
Q ss_pred CCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 505 EGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 505 egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
.+|.+.++|.++ |+||+.+.|.+.++++..+ ++.++.|..|... ++.+.+++-++||+++
T Consensus 19 ~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~d~~~-~l~~~~~V~~~PT~~~ 79 (105)
T 3zzx_A 19 GNKLVVIDFYATWCGPCKMIAPKLEELSQSMS-DVVFLKVDVDECE-DIAQDNQIACMPTFLF 79 (105)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TEEEEEEETTTCH-HHHHHTTCCBSSEEEE
T ss_pred CCCEEEEEEECCCCCCccCCCcchhhhhhccC-CeEEEEEecccCH-HHHHHcCCCeecEEEE
Confidence 478999999999 9999999999999987643 5677777777654 4666778999999876
No 340
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.09 E-value=0.0069 Score=52.03 Aligned_cols=62 Identities=10% Similarity=0.056 Sum_probs=48.5
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhC-CCCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTA-RIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~-~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
..+++ +.++|.+. |++|+.+.+.+.+++++. +.++.++.|.-|+..+ +.+.+++-.+|++++
T Consensus 20 ~~~~~-vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~-~~~~~~v~~~Pt~~~ 83 (126)
T 1x5e_A 20 LLEGD-WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPG-LSGRFIINALPTIYH 83 (126)
T ss_dssp HTSSE-EEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHH-HHHHTTCCSSSEEEE
T ss_pred HhCCC-EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHH-HHHHcCCcccCEEEE
Confidence 34555 67788777 999999999999998763 3478899998887654 455578889999876
No 341
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=96.06 E-value=0.0062 Score=53.26 Aligned_cols=61 Identities=10% Similarity=0.126 Sum_probs=50.5
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
..||.+.++|.++ |++|+.+.+.+.+++++. .++.++.|..|+.. .+.+.+++-.+|++++
T Consensus 44 ~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~v~~~~~~-~~~~~~~v~~~Pt~~~ 105 (139)
T 3d22_A 44 RDGKIVLANFSARWCGPSRQIAPYYIELSENY-PSLMFLVIDVDELS-DFSASWEIKATPTFFF 105 (139)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTSH-HHHHHTTCCEESEEEE
T ss_pred hcCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCCEEEEEeCcccH-HHHHHcCCCcccEEEE
Confidence 4689999999888 999999999999998775 36888899888755 4556678889999876
No 342
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=96.06 E-value=0.0085 Score=57.97 Aligned_cols=63 Identities=5% Similarity=-0.061 Sum_probs=53.2
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCC---CCEEEEEEecCC-chhhhhhcccccccccccc
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTAR---IPLEMVYVGKST-KRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~---~~fEiv~Vs~d~-~~e~~~~~~~~~~~~~~~~ 566 (570)
..++.+.++|.+. |++|+.|.|.+.+++++.+ ..+.++.|..+. ...++.+.+++..+|++++
T Consensus 28 ~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~Pt~~~ 95 (244)
T 3q6o_A 28 GSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGFPTVRF 95 (244)
T ss_dssp SCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSSSEEEE
T ss_pred hCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCccCEEEE
Confidence 3569999999999 9999999999999998744 489999999864 4567888889999999864
No 343
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=96.04 E-value=0.0035 Score=52.47 Aligned_cols=66 Identities=8% Similarity=0.112 Sum_probs=51.8
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhC---CCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTA---RIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~---~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
..+||.+.++|.+. |++|+.|.+.+.+++++. +.++.++.|..++.. .+.+.+++-..|++++ +|+
T Consensus 21 ~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~~~~~v~~~Pt~~~~~~g~ 92 (120)
T 1mek_A 21 LAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEES-DLAQQYGVRGYPTIKFFRNGD 92 (120)
T ss_dssp HHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCC-SSHHHHTCCSSSEEEEEESSC
T ss_pred HccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCH-HHHHHCCCCcccEEEEEeCCC
Confidence 35789999999888 999999999999998763 356777777776654 4555678889999987 665
No 344
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=95.99 E-value=0.0066 Score=52.21 Aligned_cols=62 Identities=6% Similarity=0.045 Sum_probs=51.5
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
..+|.+.++|.+. |++|+.+.+.+.+++++.+..+.++.|..|+..+ +.+.+++-.+|++++
T Consensus 33 ~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~-l~~~~~v~~~Pt~~~ 95 (130)
T 2dml_A 33 QSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQS-LGGQYGVQGFPTIKI 95 (130)
T ss_dssp TCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHH-HHHHHTCCSSSEEEE
T ss_pred cCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHH-HHHHcCCCccCEEEE
Confidence 4688899999888 9999999999999998766668888898887654 455578889999876
No 345
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=95.99 E-value=0.0098 Score=57.01 Aligned_cols=62 Identities=8% Similarity=0.026 Sum_probs=52.8
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
..+|.+.|+|.+. |++|+.+.+.+.+++++.+..+.++.|..|+..+ +.+.+++..+|++++
T Consensus 28 ~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~-l~~~~~v~~~Pt~~~ 90 (222)
T 3dxb_A 28 KADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPG-TAPKYGIRGIPTLLL 90 (222)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTT-TGGGGTCCSBSEEEE
T ss_pred hcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHH-HHHHcCCCcCCEEEE
Confidence 4689999999888 9999999999999998876679999999887655 445578899999887
No 346
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=95.95 E-value=0.008 Score=55.04 Aligned_cols=54 Identities=9% Similarity=-0.009 Sum_probs=43.9
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhC-CCCE------EEEEEecCC-chhhhhhcc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTA-RIPL------EMVYVGKST-KRDKCGESW 556 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~-~~~f------Eiv~Vs~d~-~~e~~~~~~ 556 (570)
...||.+.|+|.+. |++|+...+.+.+++++. +..+ +++.|+.|+ +.+.+++++
T Consensus 56 ~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~ 118 (183)
T 3lwa_A 56 DFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFV 118 (183)
T ss_dssp GGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHH
T ss_pred HhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHH
Confidence 46899999999777 999999999999998752 2235 999999998 777777774
No 347
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=95.93 E-value=0.0064 Score=53.58 Aligned_cols=63 Identities=11% Similarity=0.048 Sum_probs=48.3
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc----CCC
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT----SGK 569 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~----~~~ 569 (570)
..||.+.++|.+. |++|+.+.+.+.+++++. .+.++.|..|... .+.+.+++..+|++++ +|+
T Consensus 38 ~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~~~~-~l~~~~~v~~~Pt~~~~~~~~g~ 105 (133)
T 3cxg_A 38 TQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVDIHP-KLNDQHNIKALPTFEFYFNLNNE 105 (133)
T ss_dssp -CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETTTCH-HHHHHTTCCSSSEEEEEEEETTE
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEeccchH-HHHHhcCCCCCCEEEEEEecCCC
Confidence 3578999999888 999999999998887654 4666666666544 4556678999999876 664
No 348
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=95.89 E-value=0.0091 Score=54.94 Aligned_cols=58 Identities=9% Similarity=-0.059 Sum_probs=45.3
Q ss_pred ccccccCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhccccc
Q 008311 499 VLDWIKEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPL 559 (570)
Q Consensus 499 i~~~~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~ 559 (570)
+......||.+.|||.+. |++|+...+.+.+++++ .++++.|+-|++.+.+++.++..
T Consensus 51 ~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~vs~~d~~~~~~~~~~~~ 109 (176)
T 3kh7_A 51 LTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ---GVVIYGINYKDDNAAAIKWLNEL 109 (176)
T ss_dssp EEGGGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCEEEEEEESCCHHHHHHHHHHT
T ss_pred ecHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC---CCEEEEEeCCCCHHHHHHHHHHc
Confidence 333456799999988777 99999999999999887 69999999776666665554443
No 349
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=95.89 E-value=0.0099 Score=51.99 Aligned_cols=68 Identities=7% Similarity=0.184 Sum_probs=40.4
Q ss_pred EEEEecCCCHHhHHHHHHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeeccccccChHHH
Q 008311 350 LLLISDLDISQEELSILEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPTLIDRAVI 429 (570)
Q Consensus 350 lL~FwAsWCpPCr~e~L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~l~D~~~~ 429 (570)
++.|+++|||+|+.. |.++.+++. ..++++..+.+ |. +.+. .+..
T Consensus 27 Vvvf~~~~Cp~C~~a-lk~~L~~~~------~~~i~~~~vdi-d~-----~~~~----------------------~~~~ 71 (118)
T 3c1r_A 27 IFVASKTYCPYCHAA-LNTLFEKLK------VPRSKVLVLQL-ND-----MKEG----------------------ADIQ 71 (118)
T ss_dssp EEEEECSSCHHHHHH-HHHHHTTSC------CCGGGEEEEEG-GG-----STTH----------------------HHHH
T ss_pred EEEEEcCCCcCHHHH-HHHHHHHcC------CCCCCeEEEEC-cc-----CCCh----------------------HHHH
Confidence 344999999999986 344443332 12356666776 11 1110 1123
Q ss_pred HHHHHhCCCCCCceEEEECCCCcEEc
Q 008311 430 RYVKDVWHFKNKPILVVLDPQGRVVS 455 (570)
Q Consensus 430 ~~L~~~y~V~~IPtlVVLDpqGkVv~ 455 (570)
..+++.+++.++|++++ +|+.+.
T Consensus 72 ~~l~~~~g~~tvP~vfi---~g~~ig 94 (118)
T 3c1r_A 72 AALYEINGQRTVPNIYI---NGKHIG 94 (118)
T ss_dssp HHHHHHHSCCSSCEEEE---TTEEEE
T ss_pred HHHHHHhCCCCcCEEEE---CCEEEE
Confidence 45777789999998754 677663
No 350
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=95.88 E-value=0.013 Score=51.87 Aligned_cols=44 Identities=11% Similarity=-0.065 Sum_probs=38.0
Q ss_pred ccCCeEEEEEecCC-CchHHHH-HHHHHHHHhhCC-CCEEEEEEecC
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKF-TTAARSVANTAR-IPLEMVYVGKS 546 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~F-T~~l~~vy~~~~-~~fEiv~Vs~d 546 (570)
...||.+.|+|.+. |++|+.. .+.+.+++++.+ ..++++.|+.|
T Consensus 25 ~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~ 71 (158)
T 3eyt_A 25 DLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTV 71 (158)
T ss_dssp GGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECC
T ss_pred HhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEec
Confidence 45799999999877 9999997 999999998744 67999999964
No 351
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=95.86 E-value=0.005 Score=60.72 Aligned_cols=61 Identities=7% Similarity=0.039 Sum_probs=52.6
Q ss_pred CCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 505 EGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 505 egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
.||.+.++|.+. |+||+.+.|.+.+++++.+.++.++.|..|... .+.+.+++.++||+++
T Consensus 25 ~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~-~~~~~~~v~~~Pt~~~ 86 (287)
T 3qou_A 25 MTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQ-MIAAQFGLRAIPTVYL 86 (287)
T ss_dssp TTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCH-HHHHTTTCCSSSEEEE
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCH-HHHHHcCCCCCCeEEE
Confidence 489999999999 999999999999999876667999999888654 5667788999999876
No 352
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=95.86 E-value=0.021 Score=52.07 Aligned_cols=23 Identities=13% Similarity=0.208 Sum_probs=17.5
Q ss_pred HHHHHhCCCCCCceEEEECCCCcEEc
Q 008311 430 RYVKDVWHFKNKPILVVLDPQGRVVS 455 (570)
Q Consensus 430 ~~L~~~y~V~~IPtlVVLDpqGkVv~ 455 (570)
..+.+.+++.++|++++ +|+.+.
T Consensus 92 ~~L~~~~g~~tvP~ifi---~G~~ig 114 (146)
T 2ht9_A 92 DALYKMTGERTVPRIFV---NGTFIG 114 (146)
T ss_dssp HHHHHHHSCCCSCEEEE---TTEEEE
T ss_pred HHHHHHhCCCCcCeEEE---CCEEEe
Confidence 45777889999999864 677764
No 353
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=95.85 E-value=0.014 Score=54.85 Aligned_cols=60 Identities=12% Similarity=0.062 Sum_probs=52.9
Q ss_pred CCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhccccccccccc
Q 008311 505 EGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLV 565 (570)
Q Consensus 505 egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~ 565 (570)
+++.|.+-|+|+ |+|||...|.+.+++++.+..+.++.|.-|... .+.+.+++.++|||+
T Consensus 40 ~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~-e~a~~y~V~siPT~~ 100 (160)
T 2av4_A 40 DERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEVP-DFNTMYELYDPVSVM 100 (160)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCC-TTTTTTTCCSSEEEE
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCCH-HHHHHcCCCCCCEEE
Confidence 578899999999 999999999999999887777889999888654 578889999999995
No 354
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=95.82 E-value=0.013 Score=51.97 Aligned_cols=45 Identities=11% Similarity=0.012 Sum_probs=38.2
Q ss_pred cccCCeEEEEEecCC-CchHHHHHHHHHHHHhh-CCCCEEEEEEecC
Q 008311 502 WIKEGKYIFLYGGDD-VEWVRKFTTAARSVANT-ARIPLEMVYVGKS 546 (570)
Q Consensus 502 ~~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d 546 (570)
....||.+.|+|.+. |++|+.+.+.+.+++++ .+..++++.|+.|
T Consensus 34 ~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~ 80 (164)
T 2h30_A 34 YLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASP 80 (164)
T ss_dssp GCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECT
T ss_pred HHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcC
Confidence 346899999999888 99999999999999876 3456999999864
No 355
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=95.76 E-value=0.0069 Score=54.46 Aligned_cols=46 Identities=15% Similarity=0.124 Sum_probs=37.9
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhh
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKC 552 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~ 552 (570)
..||.+.|+|.+. |++|+.+.+.+.+++++ .++++.|+.|++.+.+
T Consensus 49 ~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~v~~~~~~~~~ 95 (168)
T 2b1k_A 49 TQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ---GIRVVGMNYKDDRQKA 95 (168)
T ss_dssp CCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCCEEEEEESCCHHHH
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHC---CCEEEEEECCCChHHH
Confidence 5899988988777 99999999999999876 6889999866554433
No 356
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=95.75 E-value=0.017 Score=52.94 Aligned_cols=94 Identities=20% Similarity=0.206 Sum_probs=51.9
Q ss_pred ccCCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEE--ecccCCCC--------CC-hhhHHHHHHH
Q 008311 343 VLRRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWI--PIVDHFIH--------WD-DPTQKKFETL 409 (570)
Q Consensus 343 ~LkGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~I--sIvD~s~~--------w~-D~~~~~F~~~ 409 (570)
.-.||++++.|+..+||.|+.+. |.+ + .++.|+++ |+...... |. ....+.|+.+
T Consensus 11 ~~~a~~~vv~f~D~~Cp~C~~~~~~l~~----l--------~~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~ 78 (147)
T 3gv1_A 11 RGNGKLKVAVFSDPDCPFCKRLEHEFEK----M--------TDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDW 78 (147)
T ss_dssp ETTCCEEEEEEECTTCHHHHHHHHHHTT----C--------CSEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHH
T ss_pred cCCCCEEEEEEECCCChhHHHHHHHHhh----c--------CceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHH
Confidence 34679999999999999999976 432 2 13556655 54110000 00 0112233332
Q ss_pred H--cCCCceeecccccc-ChHHHHHHHHhCCCCCCceEEEECCCCcE
Q 008311 410 Q--SSMPWYTVYHPTLI-DRAVIRYVKDVWHFKNKPILVVLDPQGRV 453 (570)
Q Consensus 410 ~--~~MPW~aV~fP~l~-D~~~~~~L~~~y~V~~IPtlVVLDpqGkV 453 (570)
. ...|- ..+... .......+.+.+||++.|++++ .+|++
T Consensus 79 ~~~g~~~~---~~~~~~~~v~~~~~la~~~gI~gtPt~vi--~nG~~ 120 (147)
T 3gv1_A 79 MRKGKFPV---GGSICDNPVAETTSLGEQFGFNGTPTLVF--PNGRT 120 (147)
T ss_dssp HHHCCCCT---TCCCCSCSHHHHHHHHHHTTCCSSCEEEC--TTSCE
T ss_pred HhCCCCCC---ccHHHHHHHHHHHHHHHHhCCCccCEEEE--ECCEE
Confidence 2 12220 011110 1123457889999999999998 57764
No 357
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=95.74 E-value=0.0039 Score=53.47 Aligned_cols=64 Identities=11% Similarity=0.098 Sum_probs=51.5
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
.+||.+.+||.+. |++|+.+.+.+.+++++.+ ++.++.|..|+.. ++.+.+++...|++++ +|+
T Consensus 34 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~-~~~~~~~v~~~Pt~~~~~~g~ 100 (130)
T 1wmj_A 34 EAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVDELK-EVAEKYNVEAMPTFLFIKDGA 100 (130)
T ss_dssp TTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTTTSG-GGHHHHTCCSSCCCCBCTTTT
T ss_pred hcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEeccchH-HHHHHcCCCccceEEEEeCCe
Confidence 3688999999888 9999999999999987754 6778888777654 4556678889999988 554
No 358
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=95.74 E-value=0.014 Score=55.16 Aligned_cols=65 Identities=17% Similarity=0.055 Sum_probs=54.2
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
..|+.+.++|.+. |++|+.+.|.+.+++++.+..+.++.|..|...+ +.+-+++-.+|++++ +|+
T Consensus 112 ~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~-l~~~~~v~~~Pt~~~~~~G~ 179 (210)
T 3apq_A 112 NSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRM-LCRMKGVNSYPSLFIFRSGM 179 (210)
T ss_dssp HHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHH-HHHHTTCCSSSEEEEECTTS
T ss_pred ccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCccHH-HHHHcCCCcCCeEEEEECCC
Confidence 5788999999888 9999999999999998766679999998887654 555678899999886 554
No 359
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=95.73 E-value=0.0084 Score=52.60 Aligned_cols=61 Identities=13% Similarity=0.092 Sum_probs=48.6
Q ss_pred CCeEEEEEecCC-CchHHHHHHHH---HHHHhhCCCCEEEEEEecCCc---hhhhhhcccccccccccc
Q 008311 505 EGKYIFLYGGDD-VEWVRKFTTAA---RSVANTARIPLEMVYVGKSTK---RDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 505 egk~I~lYfgad-~~w~r~FT~~l---~~vy~~~~~~fEiv~Vs~d~~---~e~~~~~~~~~~~~~~~~ 566 (570)
.||.+.|+|.+. |++|+.+.+.+ .+++++.+ ++.++.|.-+.. ...+.+.+++..+|++++
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~-~~~~~~vd~~~~~~~~~~l~~~~~v~~~Pt~~~ 97 (134)
T 2fwh_A 30 KGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA-DTVLLQANVTANDAQDVALLKHLNVLGLPTILF 97 (134)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT-TSEEEEEECTTCCHHHHHHHHHTTCCSSSEEEE
T ss_pred cCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc-CcEEEEEeCCCCcchHHHHHHHcCCCCCCEEEE
Confidence 488999999888 99999999888 78876644 488888888643 346777788899999875
No 360
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=95.73 E-value=0.017 Score=52.80 Aligned_cols=55 Identities=16% Similarity=0.039 Sum_probs=43.7
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhC-CCCEEEEEEecCCc-hhhhhhccc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTA-RIPLEMVYVGKSTK-RDKCGESWQ 557 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~-~~~fEiv~Vs~d~~-~e~~~~~~~ 557 (570)
...||.+.|+|.+. |++|+...+.+.+++++. +..++++.|+.|.+ .+.+++.++
T Consensus 57 ~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~ 114 (186)
T 1jfu_A 57 DFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLK 114 (186)
T ss_dssp GGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHH
T ss_pred HcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHH
Confidence 35799999999777 999999999999999874 47899999999875 344444433
No 361
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=94.71 E-value=0.0017 Score=53.04 Aligned_cols=65 Identities=12% Similarity=0.098 Sum_probs=51.7
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--CCC
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT--SGK 569 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~--~~~ 569 (570)
..+|.+.++|.+. |++|+.+.+.+.+++++.+.++.++.|..|+.. .+.+.++.-..|++++ +|+
T Consensus 17 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~v~~~Pt~~~~~~g~ 84 (106)
T 2yj7_A 17 KSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENP-NTAAQYGIRSIPTLLLFKNGQ 84 (106)
Confidence 4678888888888 999999999999998776557888888877654 4556678888999887 664
No 362
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=95.72 E-value=0.018 Score=50.53 Aligned_cols=64 Identities=11% Similarity=-0.001 Sum_probs=47.8
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhC-CCCEEEEEEecCC----------------------chhhhhhcccc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTA-RIPLEMVYVGKST----------------------KRDKCGESWQP 558 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~-~~~fEiv~Vs~d~----------------------~~e~~~~~~~~ 558 (570)
...||.+.|+|.+. |++|+...+.+.+++++. +..++++.|+.|. +...+.+.+++
T Consensus 25 ~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i 104 (153)
T 2l5o_A 25 DLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGT 104 (153)
T ss_dssp HHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTC
T ss_pred HhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCC
Confidence 35789988888777 999999999999998763 4569999998542 23345566667
Q ss_pred cccccccc
Q 008311 559 LQLKSLVT 566 (570)
Q Consensus 559 ~~~~~~~~ 566 (570)
-.+|++++
T Consensus 105 ~~~P~~~l 112 (153)
T 2l5o_A 105 QVYPTSVL 112 (153)
T ss_dssp CSSSEEEE
T ss_pred CccCeEEE
Confidence 77777654
No 363
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=95.70 E-value=0.021 Score=56.51 Aligned_cols=68 Identities=13% Similarity=0.163 Sum_probs=45.0
Q ss_pred CCCEEEEEEec--CCCHHhHHHHHHHHHHHHhhhhhccCCCeEEEEEecccCCCCCCh--hhHHHHHHHHcCCCceeecc
Q 008311 345 RRKNVLLLISD--LDISQEELSILEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDD--PTQKKFETLQSSMPWYTVYH 420 (570)
Q Consensus 345 kGKvVlL~FwA--sWCpPCr~e~L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D--~~~~~F~~~~~~MPW~aV~f 420 (570)
.+++|+|+||| +||+ ....+.++.++++. ..++.|+-|.+ | + .+
T Consensus 21 ~~~~vlV~FyA~~pWCg--l~P~~e~lA~~~~~-----~~~v~~akVDv-d------~~g~~------------------ 68 (240)
T 2qc7_A 21 KSKFVLVKFDTQYPYGE--KQDEFKRLAENSAS-----SDDLLVAEVGI-S------DYGDK------------------ 68 (240)
T ss_dssp GCSEEEEEECCSSCCSH--HHHHHHHHHHHHTT-----CTTEEEEEECC-C------CSSSC------------------
T ss_pred CCCCEEEEEeCCCCCCc--chHHHHHHHHHhcC-----CCCeEEEEEeC-C------cccch------------------
Confidence 46899999999 9998 22226666666642 23566666654 1 1 00
Q ss_pred ccccChHHHHHHHHhCCCC--CCceEEEECCCCc
Q 008311 421 PTLIDRAVIRYVKDVWHFK--NKPILVVLDPQGR 452 (570)
Q Consensus 421 P~l~D~~~~~~L~~~y~V~--~IPtlVVLDpqGk 452 (570)
. ...+.+.|+|+ ++||++++ ++|+
T Consensus 69 ----~---~~~l~~~~~V~~~~~PTl~~f-~~G~ 94 (240)
T 2qc7_A 69 ----L---NMELSEKYKLDKESYPVFYLF-RDGD 94 (240)
T ss_dssp ----C---SHHHHHHTTCCGGGCSEEEEE-ETTC
T ss_pred ----h---hHHHHHHcCCCCCCCCEEEEE-eCCC
Confidence 0 12367889999 99999999 4565
No 364
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=95.70 E-value=0.018 Score=52.89 Aligned_cols=57 Identities=4% Similarity=-0.043 Sum_probs=46.6
Q ss_pred cccCCeEEEEEecCC-CchHHHHHHHHHHHHhh-CCCCEEEEEEecCC-------chhhhhhcccc
Q 008311 502 WIKEGKYIFLYGGDD-VEWVRKFTTAARSVANT-ARIPLEMVYVGKST-------KRDKCGESWQP 558 (570)
Q Consensus 502 ~~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d~-------~~e~~~~~~~~ 558 (570)
....||.+.|+|.+. |++|+.-.+.+.+++++ .+..++++.|+.|. +.+.+++.++.
T Consensus 34 ~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~ 99 (180)
T 3kij_A 34 EKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARK 99 (180)
T ss_dssp GGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHH
T ss_pred HHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHH
Confidence 346899999999888 99999999999999987 45569999999764 66667666554
No 365
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=95.69 E-value=0.0088 Score=52.63 Aligned_cols=49 Identities=8% Similarity=-0.002 Sum_probs=39.7
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhh
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCG 553 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~ 553 (570)
...||.+.|+|.+. |++|+.+.+.+.+++++ .+++++.|+.|++.+.++
T Consensus 39 ~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~~v~~v~v~~~~~~~~~~ 88 (156)
T 1kng_A 39 AFKGKVSLVNVWASWCVPCHDEAPLLTELGKD--KRFQLVGINYKDAADNAR 88 (156)
T ss_dssp GGTTSCEEEEEECTTCHHHHHHHHHHHHHTTC--TTSEEEEEEESCCHHHHH
T ss_pred HhCCCEEEEEEEcccCHhHHHHHHHHHHHHhc--CCeEEEEEECCCCHHHHH
Confidence 45688888888777 99999999999999876 569999999776554443
No 366
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=95.60 E-value=0.0068 Score=55.20 Aligned_cols=61 Identities=13% Similarity=0.007 Sum_probs=46.8
Q ss_pred ccCCeEEEEEecCC-CchHHHH------HHHHHHHHhhCCCCEEEEEEecCCchhh-----h------------------
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKF------TTAARSVANTARIPLEMVYVGKSTKRDK-----C------------------ 552 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~F------T~~l~~vy~~~~~~fEiv~Vs~d~~~e~-----~------------------ 552 (570)
..+||.|.|+|.+. |+|||.+ .+.+.+.+++ +|.++.|.-|+..+. +
T Consensus 44 ~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~---~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (172)
T 3f9u_A 44 RQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN---DYVLITLYVDNKTPLTEPVKIMENGTERTLRTVGDKWSY 120 (172)
T ss_dssp HHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH---HCEEEEEETTCCCEEEEEEEEEETTEEEEEEEHHHHHHH
T ss_pred HHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC---CEEEEEEecCcccccchhhhhhhcchhhhhhhhhhhhhH
Confidence 36899999999999 9999998 5666666654 788999988765532 1
Q ss_pred --hhcccccccccccc
Q 008311 553 --GESWQPLQLKSLVT 566 (570)
Q Consensus 553 --~~~~~~~~~~~~~~ 566 (570)
.+.+++..+|++++
T Consensus 121 ~~~~~~~v~~~Pt~~l 136 (172)
T 3f9u_A 121 LQRVKFGANAQPFYVL 136 (172)
T ss_dssp HHHHHHSCCCSSEEEE
T ss_pred HHHHHcCCCCcceEEE
Confidence 45677889999764
No 367
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=95.55 E-value=0.035 Score=55.32 Aligned_cols=70 Identities=9% Similarity=0.108 Sum_probs=44.8
Q ss_pred CCCEEEEEEe--cCCCHHhHHHHHHHHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCceeecccc
Q 008311 345 RRKNVLLLIS--DLDISQEELSILEQIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYTVYHPT 422 (570)
Q Consensus 345 kGKvVlL~Fw--AsWCpPCr~e~L~~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~aV~fP~ 422 (570)
.+++|+|.|| |+||+ ..-.+.++-++++. ...++.|.-|.+ | + |+
T Consensus 32 ~~~~vlV~Fy~~ApWCg--l~P~~e~lA~~~~~----~~~~v~~akVD~-d------~-------------------~g- 78 (248)
T 2c0g_A 32 RFPYSVVKFDIASPYGE--KHEAFTAFSKSAHK----ATKDLLIATVGV-K------D-------------------YG- 78 (248)
T ss_dssp TSSEEEEEEEESSCCSH--HHHHHHHHHHHHHH----HCSSEEEEEEEE-C------S-------------------ST-
T ss_pred cCCCEEEEEECCCCCCc--cHHHHHHHHHHHhc----cCCCeEEEEEEC-C------c-------------------cc-
Confidence 4689999999 99998 22226666665541 023566666664 1 1 00
Q ss_pred ccChHHHHHHHHhCCCC--CCceEEEECCCCc
Q 008311 423 LIDRAVIRYVKDVWHFK--NKPILVVLDPQGR 452 (570)
Q Consensus 423 l~D~~~~~~L~~~y~V~--~IPtlVVLDpqGk 452 (570)
+ +....+.+.|+|+ ++||++++. |+
T Consensus 79 --~-~~n~~la~~~~V~~~~~PTl~~F~--G~ 105 (248)
T 2c0g_A 79 --E-LENKALGDRYKVDDKNFPSIFLFK--GN 105 (248)
T ss_dssp --T-CTTHHHHHHTTCCTTSCCEEEEES--SS
T ss_pred --c-cccHHHHHHhCCCcCCCCeEEEEe--CC
Confidence 0 0012477889999 999999996 87
No 368
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.55 E-value=0.027 Score=49.92 Aligned_cols=23 Identities=13% Similarity=0.208 Sum_probs=17.4
Q ss_pred HHHHHhCCCCCCceEEEECCCCcEEc
Q 008311 430 RYVKDVWHFKNKPILVVLDPQGRVVS 455 (570)
Q Consensus 430 ~~L~~~y~V~~IPtlVVLDpqGkVv~ 455 (570)
..+.+.+++.++|++++ +|+.+.
T Consensus 70 ~~l~~~~g~~~vP~l~i---~G~~ig 92 (130)
T 2cq9_A 70 DALYKMTGERTVPRIFV---NGTFIG 92 (130)
T ss_dssp HHHHHHHSSCCSSEEEE---TTEEEE
T ss_pred HHHHHHhCCCCcCEEEE---CCEEEc
Confidence 34677789999999864 677764
No 369
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=95.54 E-value=0.016 Score=53.89 Aligned_cols=55 Identities=9% Similarity=0.110 Sum_probs=46.2
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhh-CCCCEEEEEEecC-------Cchhhhhhccc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANT-ARIPLEMVYVGKS-------TKRDKCGESWQ 557 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d-------~~~e~~~~~~~ 557 (570)
...||.+.|+|.+. |++|+...+.+.++|++ .+..++++.|+.| ++.+.++++++
T Consensus 43 ~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~ 106 (187)
T 3dwv_A 43 QHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVC 106 (187)
T ss_dssp GGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCC
T ss_pred HhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHH
Confidence 46899999999888 99999999999999976 3446999999987 46677777666
No 370
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=95.53 E-value=0.0066 Score=62.08 Aligned_cols=34 Identities=6% Similarity=0.013 Sum_probs=22.5
Q ss_pred eeeccccCCCEEEEEEecCCCHHhHHHHHHHHHHHH
Q 008311 338 RVNIEVLRRKNVLLLISDLDISQEELSILEQIYNES 373 (570)
Q Consensus 338 ~Vsls~LkGKvVlL~FwAsWCpPCr~e~L~~iY~el 373 (570)
...+...-++..++.|||+|||||++. ..+++++
T Consensus 189 ~~~la~~l~~~~vV~F~A~WC~~Ck~l--~p~le~l 222 (291)
T 3kp9_A 189 AVGLAAHLRQIGGTMYGAYWCPHCQDQ--KELFGAA 222 (291)
T ss_dssp HHHHHHHHHHTTCEEEECTTCHHHHHH--HHHHGGG
T ss_pred HHHHHHHhCCCCEEEEECCCCHHHHHH--HHHHHHH
Confidence 344444334445688999999999985 4455554
No 371
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=95.49 E-value=0.017 Score=51.11 Aligned_cols=43 Identities=7% Similarity=-0.018 Sum_probs=37.1
Q ss_pred ccCCeEEEEEecCC-CchHHHH-HHHHHHHHhhC-CCCEEEEEEec
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKF-TTAARSVANTA-RIPLEMVYVGK 545 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~F-T~~l~~vy~~~-~~~fEiv~Vs~ 545 (570)
...||.+.|+|.+. |++|+.. .+.+.+++++. +..++++.|+.
T Consensus 27 ~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~ 72 (160)
T 3lor_A 27 DLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHS 72 (160)
T ss_dssp HHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEEC
T ss_pred HhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEec
Confidence 45799999999888 9999995 99999999874 35699999996
No 372
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=95.49 E-value=0.014 Score=51.83 Aligned_cols=55 Identities=9% Similarity=0.105 Sum_probs=42.6
Q ss_pred ccCCeEEEEEecCC-Cch-HHHHHHHHHHHHhhCC-----CCEEEEEEecCCc---hhhhhhccc
Q 008311 503 IKEGKYIFLYGGDD-VEW-VRKFTTAARSVANTAR-----IPLEMVYVGKSTK---RDKCGESWQ 557 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w-~r~FT~~l~~vy~~~~-----~~fEiv~Vs~d~~---~e~~~~~~~ 557 (570)
...||.+.|||.+. |++ |+...+.+.+++++.+ ..+++++|+.|.. .+.++++.+
T Consensus 20 ~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~ 84 (164)
T 2ggt_A 20 DYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVK 84 (164)
T ss_dssp GGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHH
T ss_pred HcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHH
Confidence 45799999999887 999 9999999999987522 4899999998753 334444443
No 373
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=95.47 E-value=0.0064 Score=52.94 Aligned_cols=65 Identities=9% Similarity=0.063 Sum_probs=49.3
Q ss_pred cCCeEEEEEecCC-Cc--------------hHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc--
Q 008311 504 KEGKYIFLYGGDD-VE--------------WVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT-- 566 (570)
Q Consensus 504 ~egk~I~lYfgad-~~--------------w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~-- 566 (570)
.+||.+.++|.++ |+ +|+.+.|.+.+++++.+.++.++.|.-|+.. ++.+.+++-.+|++++
T Consensus 19 ~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~-~l~~~~~v~~~Pt~~~~~ 97 (123)
T 1oaz_A 19 KADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP-GTAPKYGIRGIPTLLLFK 97 (123)
T ss_dssp SCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCT-TTGGGGTCCBSSEEEEEE
T ss_pred hCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCH-HHHHHcCCCccCEEEEEE
Confidence 5789999999998 99 9999999999988765556888999888765 4556678899999987
Q ss_pred CCC
Q 008311 567 SGK 569 (570)
Q Consensus 567 ~~~ 569 (570)
+|+
T Consensus 98 ~G~ 100 (123)
T 1oaz_A 98 NGE 100 (123)
T ss_dssp SSS
T ss_pred CCE
Confidence 665
No 374
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=95.44 E-value=0.0021 Score=59.08 Aligned_cols=64 Identities=8% Similarity=0.122 Sum_probs=45.8
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccc--cccccccc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQP--LQLKSLVT 566 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~--~~~~~~~~ 566 (570)
..+||.+.|+|.+. |+||+.+.|.+.++++..+.++.++.|.-|...+...+.++. ..+|++++
T Consensus 43 ~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~ 109 (164)
T 1sen_A 43 AASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILF 109 (164)
T ss_dssp HHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEE
T ss_pred HhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcccCCcCCeEEE
Confidence 45789999999999 999999999998876443334556667666655534444454 56888764
No 375
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=94.41 E-value=0.0026 Score=56.82 Aligned_cols=55 Identities=11% Similarity=0.016 Sum_probs=45.8
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHH-HHhhC--CCCEEEEEEecCCchhhhhhccc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARS-VANTA--RIPLEMVYVGKSTKRDKCGESWQ 557 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~-vy~~~--~~~fEiv~Vs~d~~~e~~~~~~~ 557 (570)
...||.+.|+|.+. |++|+...+.+.+ ++++. +.+++++.|+.|++.+.+++..+
T Consensus 30 ~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~ 88 (159)
T 2ls5_A 30 SLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAK 88 (159)
Confidence 35789999999888 9999999999998 87653 57899999999988777776664
No 376
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=95.32 E-value=0.026 Score=50.42 Aligned_cols=55 Identities=11% Similarity=0.059 Sum_probs=43.5
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhh-CCCCEEEEEEecC-------Cchhhhhhccc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANT-ARIPLEMVYVGKS-------TKRDKCGESWQ 557 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d-------~~~e~~~~~~~ 557 (570)
...||.+.|+|.+. |++|+...+.+.+++++ .+..++++.|+.| ++.+.++++++
T Consensus 29 ~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~ 92 (170)
T 2p5q_A 29 IFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVC 92 (170)
T ss_dssp GGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHH
T ss_pred HhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHH
Confidence 45899999999888 99999999999999976 3446999999986 34555554443
No 377
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=95.31 E-value=0.033 Score=49.13 Aligned_cols=57 Identities=9% Similarity=-0.010 Sum_probs=46.0
Q ss_pred CCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 505 EGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 505 egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
.||.+.+||.+. |++|+.+.|.+.+++++. .++.++.|..++.. +.+++-.+|++++
T Consensus 29 ~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~-~~v~~~~vd~~~~~----~~~~i~~~Pt~~~ 86 (135)
T 2dbc_A 29 KDLWVVIHLYRSSVPMCLVVNQHLSVLARKF-PETKFVKAIVNSCI----EHYHDNCLPTIFV 86 (135)
T ss_dssp SSCEEEEEECCTTCHHHHHHHHHHHHHHHHC-SSEEEEEECCSSSC----SSCCSSCCSEEEE
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHC-CCcEEEEEEhhcCc----ccCCCCCCCEEEE
Confidence 568999999999 999999999999998774 35667777666543 5678888999765
No 378
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=95.30 E-value=0.077 Score=42.46 Aligned_cols=33 Identities=9% Similarity=0.047 Sum_probs=22.1
Q ss_pred EEEEecCCCHHhHHHHHHHHHHHHhhhhhccCCCeEEEEEec
Q 008311 350 LLLISDLDISQEELSILEQIYNESRLHLTRQESHYEVVWIPI 391 (570)
Q Consensus 350 lL~FwAsWCpPCr~e~L~~iY~elk~~~~k~~~~fEIV~IsI 391 (570)
+..|+++|||+|+.-. .+-++. +-+|+++.|.+
T Consensus 6 v~ly~~~~Cp~C~~~~--~~L~~~-------~i~~~~~~vd~ 38 (89)
T 3msz_A 6 VKIYTRNGCPYCVWAK--QWFEEN-------NIAFDETIIDD 38 (89)
T ss_dssp EEEEECTTCHHHHHHH--HHHHHT-------TCCCEEEECCS
T ss_pred EEEEEcCCChhHHHHH--HHHHHc-------CCCceEEEeec
Confidence 5669999999999865 222333 34677777653
No 379
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=95.26 E-value=0.022 Score=50.99 Aligned_cols=45 Identities=13% Similarity=0.144 Sum_probs=38.6
Q ss_pred ccCCeEEEEEecCC-Cch-HHHHHHHHHHHHhhC-----CCCEEEEEEecCC
Q 008311 503 IKEGKYIFLYGGDD-VEW-VRKFTTAARSVANTA-----RIPLEMVYVGKST 547 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w-~r~FT~~l~~vy~~~-----~~~fEiv~Vs~d~ 547 (570)
...||.+.|||.+. |++ |+...+.+.+++++. +..+++++|+.|.
T Consensus 23 ~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~ 74 (171)
T 2rli_A 23 DFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDP 74 (171)
T ss_dssp TTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCS
T ss_pred HhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECC
Confidence 45799999999877 999 999999999998753 3689999999883
No 380
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=95.23 E-value=0.027 Score=51.90 Aligned_cols=55 Identities=4% Similarity=-0.003 Sum_probs=44.0
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhh-CCCCEEEEEEecCC-------chhhhhhccc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANT-ARIPLEMVYVGKST-------KRDKCGESWQ 557 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d~-------~~e~~~~~~~ 557 (570)
...||.+.|+|.+. |++|+...+.+.++|++ .+..++++.|+.|+ +.+.+++.++
T Consensus 46 ~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~ 109 (181)
T 2p31_A 46 KYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFAR 109 (181)
T ss_dssp GGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHH
T ss_pred HcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHH
Confidence 46899999999887 99999999999999976 34469999999874 4556655443
No 381
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=95.23 E-value=0.062 Score=41.57 Aligned_cols=16 Identities=13% Similarity=0.000 Sum_probs=13.6
Q ss_pred EEEEecCCCHHhHHHH
Q 008311 350 LLLISDLDISQEELSI 365 (570)
Q Consensus 350 lL~FwAsWCpPCr~e~ 365 (570)
+..|+++|||+|+...
T Consensus 3 i~~y~~~~C~~C~~~~ 18 (75)
T 1r7h_A 3 ITLYTKPACVQCTATK 18 (75)
T ss_dssp EEEEECTTCHHHHHHH
T ss_pred EEEEeCCCChHHHHHH
Confidence 4569999999999866
No 382
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.21 E-value=0.014 Score=51.18 Aligned_cols=61 Identities=11% Similarity=0.024 Sum_probs=48.9
Q ss_pred CCeEEEEEecCC-CchHHHHHHHHHHHHhhCC-CCEEEEEEecCCchhhhhhccccc------ccccccc
Q 008311 505 EGKYIFLYGGDD-VEWVRKFTTAARSVANTAR-IPLEMVYVGKSTKRDKCGESWQPL------QLKSLVT 566 (570)
Q Consensus 505 egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~-~~fEiv~Vs~d~~~e~~~~~~~~~------~~~~~~~ 566 (570)
+++.+.++|.+. |++|+.+.|.+.+++++.+ .++.++.|..|+..+ +.+.+++. .+|++++
T Consensus 25 ~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~-~~~~~~v~~~~~~~~~Pt~~~ 93 (137)
T 2dj0_A 25 KRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTD-VSTRYKVSTSPLTKQLPTLIL 93 (137)
T ss_dssp TTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHH-HHHHTTCCCCSSSSCSSEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHH-HHHHccCcccCCcCCCCEEEE
Confidence 456888999888 9999999999999997744 579999998887655 44456666 8899875
No 383
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=95.21 E-value=0.021 Score=52.22 Aligned_cols=63 Identities=14% Similarity=0.054 Sum_probs=53.3
Q ss_pred ccCCe-EEEEEecCC-C--chHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 503 IKEGK-YIFLYGGDD-V--EWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 503 ~~egk-~I~lYfgad-~--~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
+..++ .+.++|.++ | +|||...|.+.+++++.+..+.++-|.-|.. .++-.-+++..||||++
T Consensus 29 v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~-~~la~~ygV~siPTlil 95 (137)
T 2qsi_A 29 IAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAE-RGLMARFGVAVCPSLAV 95 (137)
T ss_dssp HHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGH-HHHHHHHTCCSSSEEEE
T ss_pred HhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCC-HHHHHHcCCccCCEEEE
Confidence 33444 899999998 9 9999999999999998878899999987654 56677789999999975
No 384
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=95.20 E-value=0.021 Score=53.00 Aligned_cols=45 Identities=9% Similarity=0.130 Sum_probs=38.8
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhh-CCCCEEEEEEecCC
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANT-ARIPLEMVYVGKST 547 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d~ 547 (570)
...||.+.|+|.+. |++|+...+.+.+++++ .+..++++.|+.|+
T Consensus 45 ~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~ 91 (190)
T 2vup_A 45 QHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQ 91 (190)
T ss_dssp GGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCC
T ss_pred HcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCc
Confidence 45899999999888 99999999999999976 34469999999873
No 385
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=95.16 E-value=0.042 Score=47.27 Aligned_cols=61 Identities=5% Similarity=-0.073 Sum_probs=50.0
Q ss_pred CCeEEEEEecCC-CchHHHHHHHHHHHHhh-----CCCCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 505 EGKYIFLYGGDD-VEWVRKFTTAARSVANT-----ARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 505 egk~I~lYfgad-~~w~r~FT~~l~~vy~~-----~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
.++.+.++|.+. |++|+.+.|.+.+++++ .+..+.++.|..|... ++.+-+++-..||+++
T Consensus 32 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~-~l~~~~~v~~~Pt~~~ 98 (127)
T 3h79_A 32 PEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYP-DVIERMRVSGFPTMRY 98 (127)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCH-HHHHHTTCCSSSEEEE
T ss_pred CCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccH-hHHHhcCCccCCEEEE
Confidence 589999999988 99999999999999753 3467899999888654 4556678889999865
No 386
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=95.12 E-value=0.029 Score=50.94 Aligned_cols=43 Identities=5% Similarity=0.026 Sum_probs=36.9
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhh-CCCCEEEEEEecC
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANT-ARIPLEMVYVGKS 546 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d 546 (570)
...||.+.|+|.+. |++|+ ..+.+.+++++ .+..++++.|+.|
T Consensus 29 ~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d 73 (171)
T 3cmi_A 29 QLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCN 73 (171)
T ss_dssp GGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred HcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECc
Confidence 46899999999888 99999 99999999976 3446999999875
No 387
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=95.10 E-value=0.035 Score=50.97 Aligned_cols=55 Identities=9% Similarity=-0.074 Sum_probs=43.4
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhh-CCCCEEEEEEecCC-------chhhhhhccc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANT-ARIPLEMVYVGKST-------KRDKCGESWQ 557 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d~-------~~e~~~~~~~ 557 (570)
...||.+.|+|.+. |++|+...+.+.+++++ .+..++++.|+.|. +.+.++++++
T Consensus 44 ~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~ 107 (183)
T 2obi_A 44 KYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAA 107 (183)
T ss_dssp GGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHH
T ss_pred HcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHHH
Confidence 46899999999877 99999999999999976 34569999999763 4455555443
No 388
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=95.08 E-value=0.054 Score=48.11 Aligned_cols=45 Identities=7% Similarity=-0.169 Sum_probs=37.6
Q ss_pred ccCCe-EEEEEec-CC-CchHHHHHHHHHHHHhhC-CCCEEEEEEecCC
Q 008311 503 IKEGK-YIFLYGG-DD-VEWVRKFTTAARSVANTA-RIPLEMVYVGKST 547 (570)
Q Consensus 503 ~~egk-~I~lYfg-ad-~~w~r~FT~~l~~vy~~~-~~~fEiv~Vs~d~ 547 (570)
...|| .+.|+|- +. |++|+...+.+.+++++. +..++++.|+.|.
T Consensus 32 ~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~ 80 (160)
T 1xvw_A 32 GYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGP 80 (160)
T ss_dssp GGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCC
T ss_pred HhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCC
Confidence 45787 8888883 66 999999999999999874 4579999999985
No 389
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=95.03 E-value=0.0056 Score=52.58 Aligned_cols=60 Identities=5% Similarity=-0.087 Sum_probs=44.2
Q ss_pred CeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCC---chhhhhhccccccccccccCCC
Q 008311 506 GKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKST---KRDKCGESWQPLQLKSLVTSGK 569 (570)
Q Consensus 506 gk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~---~~e~~~~~~~~~~~~~~~~~~~ 569 (570)
||.+.++|.+. |++|+.+.|.+.+++++.+ .|-+..|. ...++.+.+++.++||++++|+
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~----~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i~G~ 75 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQVP----YVECSPNGPGTPQAQECTEAGITSYPTWIINGR 75 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGSC----EEESCTTCTTSCCCHHHHHTTCCSSSEEEETTE
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhCC----EEEEecccccchhHHHHHHcCCeEeCEEEECCE
Confidence 44445677788 9999999999998876543 33344332 3557788899999999999875
No 390
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=95.03 E-value=0.038 Score=50.66 Aligned_cols=44 Identities=9% Similarity=-0.025 Sum_probs=37.7
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecC
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKS 546 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d 546 (570)
...||.+.|+|.+. |++|+...+.+.+++++.+..++++.|+.|
T Consensus 30 ~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d 74 (188)
T 2cvb_A 30 QFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINAN 74 (188)
T ss_dssp GCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECC
T ss_pred HhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcC
Confidence 45789999999887 999999999999999874433999999985
No 391
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=95.00 E-value=0.024 Score=50.97 Aligned_cols=54 Identities=17% Similarity=0.019 Sum_probs=41.2
Q ss_pred ccCCeE-EEEEec-CC-CchHHHHHHHHHHHHhh-CCCCEEEEEEecCCchhhhhhccc
Q 008311 503 IKEGKY-IFLYGG-DD-VEWVRKFTTAARSVANT-ARIPLEMVYVGKSTKRDKCGESWQ 557 (570)
Q Consensus 503 ~~egk~-I~lYfg-ad-~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d~~~e~~~~~~~ 557 (570)
...||. +.|+|. +. |++|+...+.+.++|++ .+..++++.|+.|. .+.++++.+
T Consensus 25 ~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~-~~~~~~~~~ 82 (161)
T 3drn_A 25 DYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDD-INSHKRFKE 82 (161)
T ss_dssp GTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCC-HHHHHHHHH
T ss_pred HhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCC-HHHHHHHHH
Confidence 457887 888886 66 99999999999999976 34569999999985 334444433
No 392
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=95.00 E-value=0.024 Score=47.99 Aligned_cols=61 Identities=7% Similarity=0.086 Sum_probs=45.4
Q ss_pred CCeEEEEEecCCCchHHHHHHHHHHHHhhCCCCEEEEEEecCCch----hhhhhccccccccccccCCC
Q 008311 505 EGKYIFLYGGDDVEWVRKFTTAARSVANTARIPLEMVYVGKSTKR----DKCGESWQPLQLKSLVTSGK 569 (570)
Q Consensus 505 egk~I~lYfgad~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~----e~~~~~~~~~~~~~~~~~~~ 569 (570)
+++.|.+|++..|++|+.+.+.+.++ +..++++-|..+... ..+.+.+++..+|++.++|+
T Consensus 18 ~~~~vv~f~a~~C~~C~~~~~~l~~~----~~~~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~~~~g~ 82 (116)
T 2e7p_A 18 SSAPVVVFSKTYCGYCNRVKQLLTQV----GASYKVVELDELSDGSQLQSALAHWTGRGTVPNVFIGGK 82 (116)
T ss_dssp TSSSEEEEECTTCHHHHHHHHHHHHH----TCCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEETTE
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHc----CCCeEEEEccCCCChHHHHHHHHHHhCCCCcCEEEECCE
Confidence 34556665555599999999988877 456788888776652 45667778889999988885
No 393
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=94.97 E-value=0.044 Score=48.96 Aligned_cols=55 Identities=9% Similarity=0.050 Sum_probs=43.1
Q ss_pred ccCCeEEEEEecCC-Cch-HHHHHHHHHHHHhhCC----CCEEEEEEecCC---chhhhhhccc
Q 008311 503 IKEGKYIFLYGGDD-VEW-VRKFTTAARSVANTAR----IPLEMVYVGKST---KRDKCGESWQ 557 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w-~r~FT~~l~~vy~~~~----~~fEiv~Vs~d~---~~e~~~~~~~ 557 (570)
...||.+.|||.+. |++ |+...+.+.+++++.+ .+++++.|+.|. +.+.++++.+
T Consensus 32 ~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~ 95 (172)
T 2k6v_A 32 QFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAK 95 (172)
T ss_dssp GSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHH
T ss_pred HhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHH
Confidence 45899999999777 998 9999999999997744 379999999874 2344554433
No 394
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=94.92 E-value=0.0085 Score=57.29 Aligned_cols=41 Identities=5% Similarity=-0.075 Sum_probs=31.7
Q ss_pred cCCCEEEEEEecCCCHHhHHHH--H---HHHHHHHhhhhhccCCCeEEEEEec
Q 008311 344 LRRKNVLLLISDLDISQEELSI--L---EQIYNESRLHLTRQESHYEVVWIPI 391 (570)
Q Consensus 344 LkGKvVlL~FwAsWCpPCr~e~--L---~~iY~elk~~~~k~~~~fEIV~IsI 391 (570)
..+|++++.||+.|||+|+.+. | .++-+++ ++++.++.+++
T Consensus 111 ~~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~-------~~~v~~~~~~v 156 (197)
T 1un2_A 111 VAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKL-------PEGVKMTKYHV 156 (197)
T ss_dssp CTTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSS-------CTTCCEEEEEC
T ss_pred CCCCCEEEEEECCCChhHHHhCcccccHHHHHHHC-------CCCCEEEEecc
Confidence 3578999999999999999987 4 5444443 24688888887
No 395
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=94.88 E-value=0.032 Score=56.41 Aligned_cols=62 Identities=10% Similarity=0.025 Sum_probs=53.9
Q ss_pred CCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCC-chhhhhhcccccccccccc
Q 008311 505 EGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKST-KRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 505 egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~-~~e~~~~~~~~~~~~~~~~ 566 (570)
.++.+.++|.+. |++|+.+.|.+.+++++.+..+.++.|..|. ...++.+.+++-++|++++
T Consensus 34 ~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~Pt~~~ 97 (298)
T 3ed3_A 34 TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGFPTLMV 97 (298)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBSSEEEE
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCccceEEE
Confidence 578899999888 9999999999999998876679999999885 3567888889999999876
No 396
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=94.87 E-value=0.027 Score=53.09 Aligned_cols=40 Identities=8% Similarity=-0.169 Sum_probs=32.3
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEec
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPI 391 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsI 391 (570)
.||++++.|++.|||+|+.+. |.++-+++ ++++.+..+|+
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~-------~~~v~~~~~p~ 64 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSF-------KDDMYLRTEHV 64 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTC-------CTTEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHC-------CCCeEEEEecC
Confidence 589999999999999999998 66665544 23688888887
No 397
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=94.87 E-value=0.059 Score=45.61 Aligned_cols=22 Identities=27% Similarity=0.380 Sum_probs=15.7
Q ss_pred HHHHhCCCCCCceEEEECCCCcEEc
Q 008311 431 YVKDVWHFKNKPILVVLDPQGRVVS 455 (570)
Q Consensus 431 ~L~~~y~V~~IPtlVVLDpqGkVv~ 455 (570)
.+.+.++..++|++++ +|+.+.
T Consensus 63 ~l~~~~g~~~vP~v~i---~g~~ig 84 (105)
T 2yan_A 63 GLKAYSNWPTYPQLYV---KGELVG 84 (105)
T ss_dssp HHHHHHTCCSSCEEEE---TTEEEE
T ss_pred HHHHHHCCCCCCeEEE---CCEEEe
Confidence 4556678899999864 577664
No 398
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=94.86 E-value=0.069 Score=43.49 Aligned_cols=21 Identities=19% Similarity=0.200 Sum_probs=15.4
Q ss_pred HHHHhCCCCCCceEEEECCCCcEE
Q 008311 431 YVKDVWHFKNKPILVVLDPQGRVV 454 (570)
Q Consensus 431 ~L~~~y~V~~IPtlVVLDpqGkVv 454 (570)
.+.+.+++.++|++++ +|+.+
T Consensus 58 ~l~~~~g~~~vP~l~~---~g~~i 78 (92)
T 3ic4_A 58 KVHSISGSYSVPVVVK---GDKHV 78 (92)
T ss_dssp HHHHHHSSSCSCEEEE---TTEEE
T ss_pred HHHHhcCCCCcCEEEE---CCEEE
Confidence 4566678899999887 66543
No 399
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=94.82 E-value=0.034 Score=53.11 Aligned_cols=44 Identities=14% Similarity=0.045 Sum_probs=37.5
Q ss_pred ccCCeE-EEEEecCC-CchHHHHHHHHHHHHhh-CCCCEEEEEEecC
Q 008311 503 IKEGKY-IFLYGGDD-VEWVRKFTTAARSVANT-ARIPLEMVYVGKS 546 (570)
Q Consensus 503 ~~egk~-I~lYfgad-~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d 546 (570)
...||. +.|+|.+. |++|+...+.+.+++++ .+..++++.|+.|
T Consensus 55 ~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d 101 (218)
T 3u5r_E 55 EFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSN 101 (218)
T ss_dssp GGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECS
T ss_pred HhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECC
Confidence 467884 88888777 99999999999999987 4456999999997
No 400
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=94.80 E-value=0.061 Score=45.36 Aligned_cols=16 Identities=0% Similarity=-0.170 Sum_probs=13.4
Q ss_pred EEEEecCCCHHhHHHH
Q 008311 350 LLLISDLDISQEELSI 365 (570)
Q Consensus 350 lL~FwAsWCpPCr~e~ 365 (570)
+..||++|||+|+.-.
T Consensus 24 v~ly~~~~Cp~C~~ak 39 (103)
T 3nzn_A 24 VIMYGLSTCVWCKKTK 39 (103)
T ss_dssp EEEEECSSCHHHHHHH
T ss_pred EEEEcCCCCchHHHHH
Confidence 4449999999999876
No 401
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=94.67 E-value=0.029 Score=50.35 Aligned_cols=60 Identities=10% Similarity=0.005 Sum_probs=47.2
Q ss_pred ccCCeEEEEEecCC-Cc-hHHHHHHHHHHHHhh---CCCCEEEEEEecC---Cchhhhhhcccccccc
Q 008311 503 IKEGKYIFLYGGDD-VE-WVRKFTTAARSVANT---ARIPLEMVYVGKS---TKRDKCGESWQPLQLK 562 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~-w~r~FT~~l~~vy~~---~~~~fEiv~Vs~d---~~~e~~~~~~~~~~~~ 562 (570)
...||.+.|+|.+. |+ +|+...+.+.+++++ .+.+++++.|+.| ++.+.++++++..+++
T Consensus 30 ~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~ 97 (174)
T 1xzo_A 30 SLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLS 97 (174)
T ss_dssp GGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCC
T ss_pred hcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 36799999988777 99 999999999998864 3447999999998 4566777776665543
No 402
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=94.51 E-value=0.054 Score=48.21 Aligned_cols=45 Identities=7% Similarity=-0.059 Sum_probs=38.6
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhh-CCCCEEEEEEecCC
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANT-ARIPLEMVYVGKST 547 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d~ 547 (570)
...||.+.|+|.+. |++|+.-.+.+.+++++ .+..++++.|+.|.
T Consensus 28 ~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~ 74 (169)
T 2v1m_A 28 KYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQ 74 (169)
T ss_dssp GGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCC
T ss_pred HcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCc
Confidence 46899999999887 99999999999999976 34469999999863
No 403
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=94.46 E-value=0.087 Score=42.77 Aligned_cols=16 Identities=6% Similarity=0.050 Sum_probs=13.3
Q ss_pred EEEEecCCCHHhHHHH
Q 008311 350 LLLISDLDISQEELSI 365 (570)
Q Consensus 350 lL~FwAsWCpPCr~e~ 365 (570)
++.|+++|||+|+...
T Consensus 8 v~~y~~~~C~~C~~~~ 23 (89)
T 2klx_A 8 IILYTRPNCPYCKRAR 23 (89)
T ss_dssp EEEESCSCCTTTHHHH
T ss_pred EEEEECCCChhHHHHH
Confidence 4568999999999765
No 404
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=94.41 E-value=0.12 Score=40.72 Aligned_cols=16 Identities=0% Similarity=-0.162 Sum_probs=13.1
Q ss_pred EEEEecCCCHHhHHHH
Q 008311 350 LLLISDLDISQEELSI 365 (570)
Q Consensus 350 lL~FwAsWCpPCr~e~ 365 (570)
++.|+++|||+|+...
T Consensus 3 i~~y~~~~C~~C~~~~ 18 (82)
T 1fov_A 3 VEIYTKETCPYCHRAK 18 (82)
T ss_dssp EEEEECSSCHHHHHHH
T ss_pred EEEEECCCChhHHHHH
Confidence 3458999999999765
No 405
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=94.35 E-value=0.033 Score=44.38 Aligned_cols=61 Identities=7% Similarity=0.158 Sum_probs=42.2
Q ss_pred EEEEecCCCchHHHHHHHHHHHHhh-CCCCEEEEEEecCC-chhhhhhccc--cccccccccCCC
Q 008311 509 IFLYGGDDVEWVRKFTTAARSVANT-ARIPLEMVYVGKST-KRDKCGESWQ--PLQLKSLVTSGK 569 (570)
Q Consensus 509 I~lYfgad~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d~-~~e~~~~~~~--~~~~~~~~~~~~ 569 (570)
|-+|+...|++|+...+.|.++..+ .+..|+.+-+..+. ..+++.+..+ ...+|++.++|+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i~~~g~ 67 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGKPVETVPQIFVDQQ 67 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHSSCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEEEETTE
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCCCceEEEEecccChHHHHHHHHHhCCCCceeCeEEECCE
Confidence 4456555699999999999998765 45555544444332 1245666667 889999998885
No 406
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=94.27 E-value=0.014 Score=55.06 Aligned_cols=64 Identities=17% Similarity=0.136 Sum_probs=44.3
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHH---HHHHHhhCCCCEEEEEEecCCchhhhhhcc-------cccccccccc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTA---ARSVANTARIPLEMVYVGKSTKRDKCGESW-------QPLQLKSLVT 566 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~---l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~-------~~~~~~~~~~ 566 (570)
..+||.|.|.|+++ |+|||.+.+. ..++++..+.+|-.+-|..|...+-.+.++ ++-++|++++
T Consensus 36 ~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g~Pt~v~ 110 (173)
T 3ira_A 36 RKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPDIDNIYMTVCQIILGRGGWPLNII 110 (173)
T ss_dssp HHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCHHHHHHHHHHHHHHHSCCCSSEEEE
T ss_pred HHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcccCcHHHHHHHHHHHHcCCCCCcceee
Confidence 36899999999999 9999998873 234443333367777776665444334442 7888998775
No 407
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=94.12 E-value=0.049 Score=47.73 Aligned_cols=57 Identities=7% Similarity=-0.162 Sum_probs=44.9
Q ss_pred EEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCC--------chhhhhhcccccccccccc
Q 008311 508 YIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKST--------KRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 508 ~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~--------~~e~~~~~~~~~~~~~~~~ 566 (570)
.+.++|.+. |++|+.+.|.+.+++++.+ +.++.|..++ ...++.+.+++-.+||+++
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~~ 98 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSAARLEMNKAGVEGTPTLVF 98 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHHHHHHHHHHTCCSSSEEEE
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhhhHHHHHHcCCceeCeEEE
Confidence 778888888 9999999999999998766 6677776632 2345566788889999876
No 408
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=94.11 E-value=0.076 Score=48.97 Aligned_cols=55 Identities=9% Similarity=-0.094 Sum_probs=43.0
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhh-CCCCEEEEEEecCC-------chhhhhhccc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANT-ARIPLEMVYVGKST-------KRDKCGESWQ 557 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d~-------~~e~~~~~~~ 557 (570)
...||.+.|+|.+. |++|+.-.+.+.+++++ .+..++++.|+.|. +.+.+++..+
T Consensus 46 ~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~ 109 (185)
T 2gs3_A 46 KYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAA 109 (185)
T ss_dssp GGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHH
T ss_pred HcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCHHHHHHHHH
Confidence 46899999998777 99999999999999976 34569999999763 3455555543
No 409
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=94.11 E-value=0.12 Score=44.11 Aligned_cols=23 Identities=13% Similarity=0.241 Sum_probs=16.4
Q ss_pred HHHHHhCCCCCCceEEEECCCCcEEc
Q 008311 430 RYVKDVWHFKNKPILVVLDPQGRVVS 455 (570)
Q Consensus 430 ~~L~~~y~V~~IPtlVVLDpqGkVv~ 455 (570)
..+.+.++...+|++++ +|+.+.
T Consensus 63 ~~l~~~~g~~tvP~ifi---~g~~ig 85 (113)
T 3rhb_A 63 KVLERLTGQHTVPNVFV---CGKHIG 85 (113)
T ss_dssp HHHHHHHSCCSSCEEEE---TTEEEE
T ss_pred HHHHHHhCCCCcCEEEE---CCEEEc
Confidence 34556678899999865 677764
No 410
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=94.11 E-value=0.043 Score=50.45 Aligned_cols=43 Identities=9% Similarity=0.051 Sum_probs=35.6
Q ss_pred cCCe-EEEEEecCC-CchHHHHHHHHHHHHhhC-CCCEEEEEEecC
Q 008311 504 KEGK-YIFLYGGDD-VEWVRKFTTAARSVANTA-RIPLEMVYVGKS 546 (570)
Q Consensus 504 ~egk-~I~lYfgad-~~w~r~FT~~l~~vy~~~-~~~fEiv~Vs~d 546 (570)
..|| .+.|+|.+. |++|+...+.+.+++++. +..++++.|+.|
T Consensus 43 ~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d 88 (196)
T 2ywi_A 43 VKSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSN 88 (196)
T ss_dssp HCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECS
T ss_pred hCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECC
Confidence 5677 488888777 999999999999999763 346999999986
No 411
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=94.03 E-value=0.068 Score=48.02 Aligned_cols=57 Identities=7% Similarity=-0.140 Sum_probs=44.4
Q ss_pred ccCCeEEEEEecCC--CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhccccccc
Q 008311 503 IKEGKYIFLYGGDD--VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQL 561 (570)
Q Consensus 503 ~~egk~I~lYfgad--~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~ 561 (570)
...||.+.|+|.+. |++|+...+.+.+++++. ..++++.|+.|.+ +.+++..+..++
T Consensus 41 ~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~-~~~~~~~~~~~~ 99 (167)
T 2jsy_A 41 DMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLP-FAQARWCGANGI 99 (167)
T ss_dssp HHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSG-GGTSCCGGGSSC
T ss_pred HhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCH-HHHHHHHHhcCC
Confidence 34688888887543 999999999999999876 7899999999864 456666655544
No 412
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=94.02 E-value=0.044 Score=43.32 Aligned_cols=57 Identities=5% Similarity=0.139 Sum_probs=44.2
Q ss_pred EEEEecCCCchHHHHHHHHHHHHhhCCCCEEEEEEecCCc-hhhhhhccccccccccccCCC
Q 008311 509 IFLYGGDDVEWVRKFTTAARSVANTARIPLEMVYVGKSTK-RDKCGESWQPLQLKSLVTSGK 569 (570)
Q Consensus 509 I~lYfgad~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~-~e~~~~~~~~~~~~~~~~~~~ 569 (570)
|-+|+...|++|+...+.|.+. +++||.+-|..+.. .+++.+..+...+|++.++|+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~----~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~~~g~ 60 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK----GVSFQELPIDGNAAKREEMIKRSGRTTVPQIFIDAQ 60 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH----TCCCEEEECTTCSHHHHHHHHHHSSCCSCEEEETTE
T ss_pred EEEEECCCChhHHHHHHHHHHC----CCCcEEEECCCCHHHHHHHHHHhCCCCcCEEEECCE
Confidence 5578777799999887777654 88999998886532 345677778889999998885
No 413
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=93.88 E-value=0.061 Score=58.92 Aligned_cols=63 Identities=6% Similarity=0.002 Sum_probs=53.8
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCC---CCEEEEEEecCC-chhhhhhcccccccccccc
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTAR---IPLEMVYVGKST-KRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~---~~fEiv~Vs~d~-~~e~~~~~~~~~~~~~~~~ 566 (570)
..||.+.|+|.+. |++||.|.|.+.+++++.+ ..+.++.|..|+ ...++.+-+++.++|++++
T Consensus 28 ~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~PTl~~ 95 (519)
T 3t58_A 28 GSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGFPTVRF 95 (519)
T ss_dssp SCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSBSEEEE
T ss_pred hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcccCEEEE
Confidence 3579999999999 9999999999999997633 489999999875 4567888899999999875
No 414
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=93.84 E-value=0.17 Score=41.04 Aligned_cols=16 Identities=0% Similarity=-0.058 Sum_probs=13.2
Q ss_pred EEEEecCCCHHhHHHH
Q 008311 350 LLLISDLDISQEELSI 365 (570)
Q Consensus 350 lL~FwAsWCpPCr~e~ 365 (570)
++.|+++|||+|+.-.
T Consensus 8 v~ly~~~~C~~C~~~~ 23 (92)
T 2khp_A 8 VIIYTRPGCPYCARAK 23 (92)
T ss_dssp EEEEECTTCHHHHHHH
T ss_pred EEEEECCCChhHHHHH
Confidence 4568999999999755
No 415
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=93.80 E-value=0.061 Score=48.02 Aligned_cols=56 Identities=7% Similarity=0.041 Sum_probs=42.9
Q ss_pred ccCCeEEEEEecC-C-CchHHHHHHHHHHHHhh-CCCCEEEEEEecCCchhhhhhccccc
Q 008311 503 IKEGKYIFLYGGD-D-VEWVRKFTTAARSVANT-ARIPLEMVYVGKSTKRDKCGESWQPL 559 (570)
Q Consensus 503 ~~egk~I~lYfga-d-~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d~~~e~~~~~~~~~ 559 (570)
...||.+.|||.+ . |++|+.-.+.+.++|++ .+..++++.|+.| +.+.++++.+..
T Consensus 32 ~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d-~~~~~~~~~~~~ 90 (163)
T 3gkn_A 32 AHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRD-SVKSHDNFCAKQ 90 (163)
T ss_dssp GGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESS-CHHHHHHHHHHH
T ss_pred HhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCC-CHHHHHHHHHHh
Confidence 4578888888865 4 99999999999999976 3456999999998 455555555443
No 416
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=93.79 E-value=0.076 Score=49.39 Aligned_cols=46 Identities=11% Similarity=0.050 Sum_probs=39.3
Q ss_pred ccCCeEEEEEec-CC-CchHHHHHHHHHHHHhh-CCCCEEEEEEecCCc
Q 008311 503 IKEGKYIFLYGG-DD-VEWVRKFTTAARSVANT-ARIPLEMVYVGKSTK 548 (570)
Q Consensus 503 ~~egk~I~lYfg-ad-~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d~~ 548 (570)
...||.+.|||. +. |++|+...+.+.+++++ .+..++++.|+.|.+
T Consensus 42 ~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~ 90 (195)
T 2bmx_A 42 EHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSE 90 (195)
T ss_dssp SSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCH
T ss_pred HhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCH
Confidence 357999999998 77 99999999999999876 345799999999863
No 417
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=93.67 E-value=0.086 Score=46.24 Aligned_cols=37 Identities=8% Similarity=-0.016 Sum_probs=32.7
Q ss_pred eEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEec
Q 008311 507 KYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGK 545 (570)
Q Consensus 507 k~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~ 545 (570)
|.+.|+|.+. |++|+...+.+.+++++. .++++.|+.
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~ 68 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISR 68 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEEC
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeC
Confidence 7777877666 999999999999999877 888999988
No 418
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=93.56 E-value=0.12 Score=45.30 Aligned_cols=61 Identities=7% Similarity=0.049 Sum_probs=49.2
Q ss_pred CCeEEEEEecCCCchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccc--cccccc
Q 008311 505 EGKYIFLYGGDDVEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQ--LKSLVT 566 (570)
Q Consensus 505 egk~I~lYfgad~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~--~~~~~~ 566 (570)
.++.+.++|.+.|++|+.+.+.+.+++++.+..+-++.|..|... ++-+.++..+ +|++++
T Consensus 22 ~~~pv~v~f~a~~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~-~~a~~~gi~~~~iPtl~i 84 (133)
T 2djk_A 22 AGIPLAYIFAETAEERKELSDKLKPIAEAQRGVINFGTIDAKAFG-AHAGNLNLKTDKFPAFAI 84 (133)
T ss_dssp TTSCEEEEECSCSSSHHHHHHHHHHHHHSSTTTSEEEEECTTTTG-GGTTTTTCCSSSSSEEEE
T ss_pred CCCCEEEEEecChhhHHHHHHHHHHHHHHhCCeEEEEEEchHHhH-HHHHHcCCCcccCCEEEE
Confidence 345566778777999999999999999987777888888887654 4677788888 998864
No 419
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=93.45 E-value=0.076 Score=51.38 Aligned_cols=59 Identities=14% Similarity=0.148 Sum_probs=48.5
Q ss_pred CCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 505 EGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 505 egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
.|+.+.++|.+. |++|+.+.+.+.+++++.+ .+.++.|..+ ...+.+.+++..+|++++
T Consensus 119 ~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-~v~f~~vd~~--~~~l~~~~~i~~~PTl~~ 178 (217)
T 2trc_P 119 KVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-MVKFCKIRAS--NTGAGDRFSSDVLPTLLV 178 (217)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-TSEEEEEEHH--HHTCSTTSCGGGCSEEEE
T ss_pred CCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-CeEEEEEECC--cHHHHHHCCCCCCCEEEE
Confidence 468999999888 9999999999999987753 6777777776 455777789999999875
No 420
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=93.41 E-value=0.059 Score=49.53 Aligned_cols=62 Identities=8% Similarity=0.005 Sum_probs=43.3
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHH---HhhCCCCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSV---ANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~v---y~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
..+||.|.|+|+++ |+|||.+.+.+.+. .+..+..|-.|-|..+ .......+++.++||+++
T Consensus 41 ~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e--~~~~~~~~~v~~~PT~~f 106 (151)
T 3ph9_A 41 QKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHE--TTDKNLSPDGQYVPRIMF 106 (151)
T ss_dssp HHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSC--CSCGGGCTTCCCSSEEEE
T ss_pred HHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCC--chhhHhhcCCCCCCEEEE
Confidence 46899999999999 99999999987753 2222345655555422 222344567889999876
No 421
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=93.41 E-value=0.098 Score=47.50 Aligned_cols=53 Identities=15% Similarity=0.068 Sum_probs=34.9
Q ss_pred ccccCCCccccccccCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCC-CEEEEEEe
Q 008311 490 LLVDGIDPLVLDWIKEGKYIFLYGGDD-VEWVRKFTTAARSVANTARI-PLEMVYVG 544 (570)
Q Consensus 490 ll~d~~d~~i~~~~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~-~fEiv~Vs 544 (570)
|+.++-++.+. -..+|..-+.|.+- ||+|+.|.+.+.+++++.+. .|+++.+.
T Consensus 8 l~~~~~~~~~G--~~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~v~~~~~~~p 62 (175)
T 3gyk_A 8 LFNDPNAPVLG--NPEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPNVRLVYREWP 62 (175)
T ss_dssp HHCCTTSCEEE--CTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTEEEEEEECC
T ss_pred HhcCCCCCCcC--CCCCCEEEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEEEeCC
Confidence 34445556554 24566655555555 99999999999999887554 45555543
No 422
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=93.19 E-value=0.07 Score=43.46 Aligned_cols=59 Identities=12% Similarity=0.231 Sum_probs=45.3
Q ss_pred eEEEEEecCCCchHHHHHHHHHHHHhhCCCCEEEEEEecCCch------hhhhhccccccccccccCCC
Q 008311 507 KYIFLYGGDDVEWVRKFTTAARSVANTARIPLEMVYVGKSTKR------DKCGESWQPLQLKSLVTSGK 569 (570)
Q Consensus 507 k~I~lYfgad~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~------e~~~~~~~~~~~~~~~~~~~ 569 (570)
+.|-||+...|++|+.--..|.+. +.++|.+-|...+.. +.+.+......+|+++++|+
T Consensus 12 ~~v~ly~~~~Cp~C~~~~~~L~~~----gi~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~~g~ 76 (92)
T 3ic4_A 12 AEVLMYGLSTCPHCKRTLEFLKRE----GVDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVKGDK 76 (92)
T ss_dssp SSSEEEECTTCHHHHHHHHHHHHH----TCCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEETTE
T ss_pred ceEEEEECCCChHHHHHHHHHHHc----CCCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEECCE
Confidence 347789888899998866666554 899999999875532 55666677889999999875
No 423
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=93.15 E-value=0.12 Score=48.51 Aligned_cols=58 Identities=16% Similarity=0.066 Sum_probs=45.5
Q ss_pred ccCCeEEEEEecCC-Cch-HHHHHHHHHHHHhhC----CCCEEEEEEecCC---chhhhhhcccccc
Q 008311 503 IKEGKYIFLYGGDD-VEW-VRKFTTAARSVANTA----RIPLEMVYVGKST---KRDKCGESWQPLQ 560 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w-~r~FT~~l~~vy~~~----~~~fEiv~Vs~d~---~~e~~~~~~~~~~ 560 (570)
...||.+.|+|.+. |++ |+...+.+.+++++. +..++++.|+-|. +.+.++++++..+
T Consensus 38 ~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~ 104 (200)
T 2b7k_A 38 NLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFH 104 (200)
T ss_dssp GGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSC
T ss_pred HcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcC
Confidence 35799999999777 998 999999999988642 5689999999984 5566666655443
No 424
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=93.09 E-value=0.074 Score=41.13 Aligned_cols=56 Identities=18% Similarity=0.135 Sum_probs=40.4
Q ss_pred EEEEecCCCchHHHHHHHHHHHHhhCCCCEEEEEEecCCc-hhhhhhccccccccccccCCC
Q 008311 509 IFLYGGDDVEWVRKFTTAARSVANTARIPLEMVYVGKSTK-RDKCGESWQPLQLKSLVTSGK 569 (570)
Q Consensus 509 I~lYfgad~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~-~e~~~~~~~~~~~~~~~~~~~ 569 (570)
|-+|+...|++|+...+.|.+ .+.+||.+-+..+.. .+.++ ..+...+|+++++|+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~----~~i~~~~~di~~~~~~~~~~~-~~~~~~vP~l~~~g~ 59 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDR----AGLAYNTVDISLDDEARDYVM-ALGYVQAPVVEVDGE 59 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHH----TTCCCEEEETTTCHHHHHHHH-HTTCBCCCEEEETTE
T ss_pred EEEEeCCCChHHHHHHHHHHH----cCCCcEEEECCCCHHHHHHHH-HcCCCccCEEEECCe
Confidence 457777779999987777654 488888888776533 23333 467788999998875
No 425
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=93.05 E-value=0.061 Score=49.59 Aligned_cols=64 Identities=8% Similarity=0.004 Sum_probs=46.7
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHH---HHHHhhCCCCEEEEEEecCCchh-hhhhcccccccccccc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAA---RSVANTARIPLEMVYVGKSTKRD-KCGESWQPLQLKSLVT 566 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l---~~vy~~~~~~fEiv~Vs~d~~~e-~~~~~~~~~~~~~~~~ 566 (570)
-.+||.|.|||+++ |.||+.|.... .+|.+..+.+|-.+.|..++++. ++.+.+++-..|++++
T Consensus 39 k~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~f 107 (153)
T 2dlx_A 39 QMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSI 107 (153)
T ss_dssp HHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSHHHHHHHHHHTCCSSSEEEE
T ss_pred HHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCHhHHHHHHHcCCCCCCEEEE
Confidence 35799999999998 99999996433 23322223378888887766543 5778888899999865
No 426
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=93.05 E-value=0.34 Score=40.95 Aligned_cols=16 Identities=0% Similarity=-0.211 Sum_probs=13.3
Q ss_pred EEEEecCCCHHhHHHH
Q 008311 350 LLLISDLDISQEELSI 365 (570)
Q Consensus 350 lL~FwAsWCpPCr~e~ 365 (570)
+..|+++|||+|+.-.
T Consensus 18 v~vy~~~~Cp~C~~ak 33 (99)
T 3qmx_A 18 IEIYTWSTCPFCMRAL 33 (99)
T ss_dssp EEEEECTTCHHHHHHH
T ss_pred EEEEEcCCChhHHHHH
Confidence 3459999999999876
No 427
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=92.97 E-value=0.12 Score=47.38 Aligned_cols=61 Identities=10% Similarity=-0.031 Sum_probs=45.6
Q ss_pred ccccccCCeEEEEEecCC-Cc-hHHHHHHHHHHHHh---hCCCCEEEEEEecC---Cchhhhhhccccc
Q 008311 499 VLDWIKEGKYIFLYGGDD-VE-WVRKFTTAARSVAN---TARIPLEMVYVGKS---TKRDKCGESWQPL 559 (570)
Q Consensus 499 i~~~~~egk~I~lYfgad-~~-w~r~FT~~l~~vy~---~~~~~fEiv~Vs~d---~~~e~~~~~~~~~ 559 (570)
+...-..||.+-|||+.- |+ ||..-.+.+.++++ +.+.++++|+||-| ++-+.++++.+..
T Consensus 25 v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~l~~y~~~~ 93 (170)
T 4hde_A 25 FGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPENLKAFIQKF 93 (170)
T ss_dssp EEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTT
T ss_pred EeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHHHHHHHHHHc
Confidence 333457899999999766 86 99888888888765 46788999999976 3446667666543
No 428
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=92.93 E-value=0.1 Score=47.63 Aligned_cols=59 Identities=10% Similarity=-0.065 Sum_probs=46.0
Q ss_pred ccCCeEEEEEecCC-Cc-hHHHHHHHHHHHHhh---CCCCEEEEEEecC--Cchhhhhhccccccc
Q 008311 503 IKEGKYIFLYGGDD-VE-WVRKFTTAARSVANT---ARIPLEMVYVGKS--TKRDKCGESWQPLQL 561 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~-w~r~FT~~l~~vy~~---~~~~fEiv~Vs~d--~~~e~~~~~~~~~~~ 561 (570)
...||.+.|||.+. |+ +|+.-.+.+.+++++ .+.++++|.||-| +..+.++++.+..++
T Consensus 25 ~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~ 90 (170)
T 3me7_A 25 NLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGI 90 (170)
T ss_dssp GGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTC
T ss_pred HhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCC
Confidence 45699999999776 97 699999999999876 3578999999987 345566666555543
No 429
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=92.85 E-value=0.086 Score=44.50 Aligned_cols=62 Identities=10% Similarity=0.146 Sum_probs=43.2
Q ss_pred cCCeEEEEEecCCCchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhccccccccccccCCC
Q 008311 504 KEGKYIFLYGGDDVEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVTSGK 569 (570)
Q Consensus 504 ~egk~I~lYfgad~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~~~~ 569 (570)
.....|-+|+...|++|+...+.|.++.+ +..|+.+-|..+.. +.+.+-++ ..+|++.++|+
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~~~L~~l~~--~i~~~~vdi~~~~~-~el~~~~g-~~vP~l~~~g~ 75 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAKEVLQPYKD--RFILQEVDITLPEN-STWYERYK-FDIPVFHLNGQ 75 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHHHHTSTTSS--SSEEEEEETTSSTT-HHHHHHSS-SSCSEEEESSS
T ss_pred CCCCEEEEEeCCCCcchHHHHHHHHHhhh--CCeEEEEECCCcch-HHHHHHHC-CCCCEEEECCE
Confidence 44556777766669999998888876632 46666666652233 45555567 89999999886
No 430
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=92.73 E-value=0.09 Score=48.38 Aligned_cols=46 Identities=13% Similarity=0.016 Sum_probs=38.9
Q ss_pred ccCCeEEEEEec-CC-CchHHHHHHHHHHHHhhC-CCCEEEEEEecCCc
Q 008311 503 IKEGKYIFLYGG-DD-VEWVRKFTTAARSVANTA-RIPLEMVYVGKSTK 548 (570)
Q Consensus 503 ~~egk~I~lYfg-ad-~~w~r~FT~~l~~vy~~~-~~~fEiv~Vs~d~~ 548 (570)
...||.+.|||. +. |++|+...+.+.+++++. +..++++.|+.|.+
T Consensus 28 ~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~ 76 (187)
T 1we0_A 28 DLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTH 76 (187)
T ss_dssp TTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCH
T ss_pred HHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCH
Confidence 357899999997 77 999999999999998763 34799999999863
No 431
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=92.72 E-value=0.18 Score=45.60 Aligned_cols=57 Identities=5% Similarity=-0.081 Sum_probs=43.9
Q ss_pred ccCCeEEEEEe--cCCCchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhccccccc
Q 008311 503 IKEGKYIFLYG--GDDVEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQL 561 (570)
Q Consensus 503 ~~egk~I~lYf--gad~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~ 561 (570)
...||.+-|+| +..|++|+.-.+.+.++|++. ..++++.|+.|.+ +..++..+..++
T Consensus 44 ~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d~~-~~~~~~~~~~~~ 102 (171)
T 2yzh_A 44 GAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM-EGVDVTVVSMDLP-FAQKRFCESFNI 102 (171)
T ss_dssp SCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCH-HHHHHHHHHTTC
T ss_pred HhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-CCceEEEEeCCCH-HHHHHHHHHcCC
Confidence 35788888887 445999999999999999877 7899999999864 445555544433
No 432
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=92.70 E-value=0.071 Score=49.66 Aligned_cols=51 Identities=8% Similarity=-0.123 Sum_probs=41.0
Q ss_pred CCeEEEEEec-CC-CchHHHHHHHHHHHHhh-CCCCEEEEEEecCCchhhhhhcc
Q 008311 505 EGKYIFLYGG-DD-VEWVRKFTTAARSVANT-ARIPLEMVYVGKSTKRDKCGESW 556 (570)
Q Consensus 505 egk~I~lYfg-ad-~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d~~~e~~~~~~ 556 (570)
.||.+.|||. +. |++|+...+.+.+++++ .+.+++++.|+.|.+ +..++..
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~-~~~~~~~ 85 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSE-QVHFAWK 85 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCH-HHHHHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCH-HHHHHHH
Confidence 7999999998 77 99999999999999876 345799999999863 3444333
No 433
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=92.70 E-value=0.15 Score=53.14 Aligned_cols=44 Identities=9% Similarity=-0.084 Sum_probs=37.9
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhC-CCCEEEEEEecC
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTA-RIPLEMVYVGKS 546 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~-~~~fEiv~Vs~d 546 (570)
...||.+.|+|.+. |++|+...+.+.+++++. +..++++.|+.|
T Consensus 79 dl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d 124 (352)
T 2hyx_A 79 SLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTP 124 (352)
T ss_dssp GGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred HhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECC
Confidence 45799999999888 999999999999999763 447999999865
No 434
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=92.63 E-value=0.2 Score=47.69 Aligned_cols=55 Identities=11% Similarity=-0.013 Sum_probs=43.7
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhh-CCCCEEEEEEecCC-------chhhhhhccc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANT-ARIPLEMVYVGKST-------KRDKCGESWQ 557 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d~-------~~e~~~~~~~ 557 (570)
...||.+.|+|.+. |++|++-.|.|.++|++ .+..++++.|+.|. +.++++++++
T Consensus 44 ~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d~~~~i~~f~~ 107 (208)
T 2f8a_A 44 SLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLK 107 (208)
T ss_dssp GGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCSCHHHHHHHHH
T ss_pred HcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCcccccCCCCHHHHHHHHH
Confidence 46899999999888 99999999999999976 34469999999862 3456665553
No 435
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=92.61 E-value=0.21 Score=47.25 Aligned_cols=57 Identities=11% Similarity=-0.115 Sum_probs=46.0
Q ss_pred ccCCeEEEEEec-C-CCchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhccccccc
Q 008311 503 IKEGKYIFLYGG-D-DVEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQL 561 (570)
Q Consensus 503 ~~egk~I~lYfg-a-d~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~ 561 (570)
...||++.|+|. + .|++|+.=.+.+.++|++. ..++++.||.|. .+.+++..+..++
T Consensus 75 d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~~v~vv~Is~D~-~~~~~~~~~~~~~ 133 (200)
T 3zrd_A 75 SFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-ENTVVLCISSDL-PFAQSRFCGAEGL 133 (200)
T ss_dssp GGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-TTEEEEEEESSC-HHHHTTCTTTTTC
T ss_pred HhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-CCCEEEEEECCC-HHHHHHHHHHcCC
Confidence 467998888885 4 4999999999999999887 789999999985 4556666666555
No 436
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=92.57 E-value=0.09 Score=42.04 Aligned_cols=57 Identities=4% Similarity=-0.002 Sum_probs=43.2
Q ss_pred EEEEecCCCchHHHHHHHHHHHHhhCCCCEEEEEEecCCc---hhhhhhcccc-----ccccccccCCC
Q 008311 509 IFLYGGDDVEWVRKFTTAARSVANTARIPLEMVYVGKSTK---RDKCGESWQP-----LQLKSLVTSGK 569 (570)
Q Consensus 509 I~lYfgad~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~---~e~~~~~~~~-----~~~~~~~~~~~ 569 (570)
|-+|+...|++|+.--..| ++.+.++|.+.|..+.. .+++.+..+. ..+|.+.++|+
T Consensus 6 v~ly~~~~Cp~C~~~~~~L----~~~~i~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i~g~ 70 (89)
T 3msz_A 6 VKIYTRNGCPYCVWAKQWF----EENNIAFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFIDDE 70 (89)
T ss_dssp EEEEECTTCHHHHHHHHHH----HHTTCCCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEETTE
T ss_pred EEEEEcCCChhHHHHHHHH----HHcCCCceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEECCE
Confidence 7788888899998755544 55689999999876554 2456666666 88999999885
No 437
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=92.57 E-value=0.14 Score=48.92 Aligned_cols=52 Identities=15% Similarity=-0.005 Sum_probs=42.0
Q ss_pred CCeEEEEEec-CC-CchHHHHHHHHHHHHhhC-CCCEEEEEEecCCchhhhhhccc
Q 008311 505 EGKYIFLYGG-DD-VEWVRKFTTAARSVANTA-RIPLEMVYVGKSTKRDKCGESWQ 557 (570)
Q Consensus 505 egk~I~lYfg-ad-~~w~r~FT~~l~~vy~~~-~~~fEiv~Vs~d~~~e~~~~~~~ 557 (570)
.||.+.|||. ++ |++|+.-.+.+.++|++- +.++++|.|+.|.+ +..++..+
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~-~~~~~~~~ 105 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSK-YTHLAWKK 105 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCH-HHHHHHHS
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHH
Confidence 7899999997 77 999999999999998763 46899999999854 34444444
No 438
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=92.48 E-value=0.19 Score=43.98 Aligned_cols=56 Identities=5% Similarity=-0.034 Sum_probs=43.6
Q ss_pred CeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 506 GKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 506 gk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
++.+.++|.+. |+||+.+.|.+.+++++.. .+..+-|.-|.. -+.+++..+||+++
T Consensus 23 ~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~-~v~f~kvd~d~~----~~~~~v~~~PT~~~ 79 (118)
T 3evi_A 23 DVWVIIHLYRSSIPMCLLVNQHLSLLARKFP-ETKFVKAIVNSC----IQHYHDNCLPTIFV 79 (118)
T ss_dssp TCEEEEEEECTTSHHHHHHHHHHHHHHHHCT-TSEEEEEEGGGT----STTCCGGGCSEEEE
T ss_pred CCeEEEEEeCCCChHHHHHHHHHHHHHHHCC-CCEEEEEEhHHh----HHHCCCCCCCEEEE
Confidence 45889999888 9999999999999998743 455566665543 36678899999875
No 439
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=92.45 E-value=0.16 Score=48.71 Aligned_cols=47 Identities=13% Similarity=0.057 Sum_probs=40.0
Q ss_pred ccCCeEEEEEecC-C-CchHHHHHHHHHHHHhh-CCCCEEEEEEecCCch
Q 008311 503 IKEGKYIFLYGGD-D-VEWVRKFTTAARSVANT-ARIPLEMVYVGKSTKR 549 (570)
Q Consensus 503 ~~egk~I~lYfga-d-~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d~~~ 549 (570)
...||.+.|+|.+ . |++|+.-.+.|.++|++ .+..+++|.|+.|.++
T Consensus 66 ~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~ 115 (222)
T 3ztl_A 66 DYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQY 115 (222)
T ss_dssp GGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHH
T ss_pred HhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHH
Confidence 4589999999985 5 99999999999999976 3557999999998743
No 440
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=92.30 E-value=0.18 Score=47.25 Aligned_cols=46 Identities=13% Similarity=0.065 Sum_probs=39.2
Q ss_pred ccCCeEEEEEec-CC-CchHHHHHHHHHHHHhh-CCCCEEEEEEecCCc
Q 008311 503 IKEGKYIFLYGG-DD-VEWVRKFTTAARSVANT-ARIPLEMVYVGKSTK 548 (570)
Q Consensus 503 ~~egk~I~lYfg-ad-~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d~~ 548 (570)
...||.+.|||. ++ |++|+...+.+.+++++ .+..++++.|+.|.+
T Consensus 33 ~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~ 81 (202)
T 1uul_A 33 SYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSE 81 (202)
T ss_dssp GGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCH
T ss_pred HhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCH
Confidence 357899999997 77 99999999999999876 356799999999864
No 441
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=92.24 E-value=0.068 Score=50.07 Aligned_cols=40 Identities=5% Similarity=-0.113 Sum_probs=29.4
Q ss_pred CCCEEEEEEecCCCHHhHHHH--H---HHHHHHHhhhhhccCCCeEEEEEec
Q 008311 345 RRKNVLLLISDLDISQEELSI--L---EQIYNESRLHLTRQESHYEVVWIPI 391 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L---~~iY~elk~~~~k~~~~fEIV~IsI 391 (570)
.++++++.|++.|||+|+.+. + .++-+++ ++++.++++++
T Consensus 13 ~~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~ 57 (189)
T 3l9v_A 13 VDAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVL-------PQGSRMVKYHV 57 (189)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTC-------CTTCCEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHHhHhccchHHHHHhC-------CCCCEEEEEec
Confidence 457889999999999999987 4 2343333 23678888876
No 442
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=92.16 E-value=0.52 Score=39.68 Aligned_cols=15 Identities=0% Similarity=-0.431 Sum_probs=12.4
Q ss_pred EEEecCCCHHhHHHH
Q 008311 351 LLISDLDISQEELSI 365 (570)
Q Consensus 351 L~FwAsWCpPCr~e~ 365 (570)
..|+.+|||.|++--
T Consensus 7 ~vYs~~~Cp~C~~aK 21 (92)
T 2lqo_A 7 TIYTTSWCGYCLRLK 21 (92)
T ss_dssp EEEECTTCSSHHHHH
T ss_pred EEEcCCCCHhHHHHH
Confidence 458999999999854
No 443
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=92.16 E-value=0.057 Score=48.76 Aligned_cols=57 Identities=5% Similarity=0.021 Sum_probs=39.1
Q ss_pred EEEEEecCC---CchHHHHHHHHHHHHhhCCCCEE--EEEEecCCchhhhhhcccccccccccc
Q 008311 508 YIFLYGGDD---VEWVRKFTTAARSVANTARIPLE--MVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 508 ~I~lYfgad---~~w~r~FT~~l~~vy~~~~~~fE--iv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
.+.++|.++ |++|+.+.|.+.+++++. .++. ++.|.-|...+ +.+-+++.++||+++
T Consensus 36 ~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~~~~-la~~~~V~~iPT~~~ 97 (142)
T 2es7_A 36 DGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQSEA-IGDRFNVRRFPATLV 97 (142)
T ss_dssp SEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHHHHH-HHHTTTCCSSSEEEE
T ss_pred CEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCCCHH-HHHhcCCCcCCeEEE
Confidence 344455443 899999999999999876 4566 88888776554 445578999999876
No 444
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=92.10 E-value=0.19 Score=46.26 Aligned_cols=55 Identities=9% Similarity=0.009 Sum_probs=42.6
Q ss_pred ccCCeEEEEEec-CC-CchHHHHHHHHHHHHhh-CCCCEEEEEEecCCchhhhhhcccc
Q 008311 503 IKEGKYIFLYGG-DD-VEWVRKFTTAARSVANT-ARIPLEMVYVGKSTKRDKCGESWQP 558 (570)
Q Consensus 503 ~~egk~I~lYfg-ad-~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d~~~e~~~~~~~~ 558 (570)
...||++-|||. +. |++|+.=.+.|.++|++ .+..++++.|+.|.++ ..++..+.
T Consensus 48 d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~-~~~~~~~~ 105 (179)
T 3ixr_A 48 DYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVK-SHDSFCAK 105 (179)
T ss_dssp GGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHH-HHHHHHHH
T ss_pred HHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHH-HHHHHHHH
Confidence 467898888885 66 99999999999999976 4567999999998643 44444443
No 445
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=92.07 E-value=0.22 Score=44.25 Aligned_cols=22 Identities=14% Similarity=0.310 Sum_probs=15.6
Q ss_pred HHHHHhCCCCCCceEEEECCCCcEE
Q 008311 430 RYVKDVWHFKNKPILVVLDPQGRVV 454 (570)
Q Consensus 430 ~~L~~~y~V~~IPtlVVLDpqGkVv 454 (570)
..+++.+|...+|+++ + +|+.+
T Consensus 84 ~~L~~~~g~~tVP~vf-i--~g~~i 105 (129)
T 3ctg_A 84 DALEEISGQKTVPNVY-I--NGKHI 105 (129)
T ss_dssp HHHHHHHSCCSSCEEE-E--TTEEE
T ss_pred HHHHHHhCCCCCCEEE-E--CCEEE
Confidence 4566778889999965 4 46665
No 446
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=91.98 E-value=0.11 Score=48.01 Aligned_cols=44 Identities=18% Similarity=0.118 Sum_probs=38.2
Q ss_pred CCeEEEEEec-CC-CchHHHHHHHHHHHHhh-CCCCEEEEEEecCCc
Q 008311 505 EGKYIFLYGG-DD-VEWVRKFTTAARSVANT-ARIPLEMVYVGKSTK 548 (570)
Q Consensus 505 egk~I~lYfg-ad-~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d~~ 548 (570)
.||.+.|+|. +. |++|+...+.+.+++++ .+..++++.|+.|.+
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~ 76 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSK 76 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCH
Confidence 8999999997 77 99999999999999876 346799999999853
No 447
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=91.98 E-value=0.11 Score=43.30 Aligned_cols=58 Identities=10% Similarity=0.127 Sum_probs=43.4
Q ss_pred EEEEEecCCCchHHHHHHHHHHHHhhCCCC---EEEEEEecCCc----hhhhhhccccccccccccCCC
Q 008311 508 YIFLYGGDDVEWVRKFTTAARSVANTARIP---LEMVYVGKSTK----RDKCGESWQPLQLKSLVTSGK 569 (570)
Q Consensus 508 ~I~lYfgad~~w~r~FT~~l~~vy~~~~~~---fEiv~Vs~d~~----~e~~~~~~~~~~~~~~~~~~~ 569 (570)
.|-+|+...|++|+...+.|.+. +.. |+.+-|..+.. ++.+.+..+...+|++.++|+
T Consensus 13 ~v~~f~~~~C~~C~~~~~~L~~~----~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i~~~g~ 77 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKTQELLSQL----PFKEGLLEFVDITATSDTNEIQDYLQQLTGARTVPRVFIGKE 77 (105)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHS----CBCTTSEEEEEGGGSTTHHHHHHHHHHHHSCCCSCEEEETTE
T ss_pred CEEEEEcCCCHhHHHHHHHHHHc----CCCCCccEEEEccCCCCHHHHHHHHHHHhCCCCcCeEEECCE
Confidence 36677777799999888877664 444 88888877642 245677778889999998885
No 448
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=91.93 E-value=0.19 Score=46.72 Aligned_cols=46 Identities=20% Similarity=0.125 Sum_probs=39.4
Q ss_pred ccCCeEEEEEec-CC-CchHHHHHHHHHHHHhh-CCCCEEEEEEecCCc
Q 008311 503 IKEGKYIFLYGG-DD-VEWVRKFTTAARSVANT-ARIPLEMVYVGKSTK 548 (570)
Q Consensus 503 ~~egk~I~lYfg-ad-~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d~~ 548 (570)
...||.+.|+|. +. |++|+...+.+.+++++ .+..++++.|+.|..
T Consensus 31 ~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~ 79 (197)
T 1qmv_A 31 DYKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQ 79 (197)
T ss_dssp GGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCH
T ss_pred HHCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCH
Confidence 357899999998 77 99999999999999876 345799999999864
No 449
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=91.90 E-value=0.09 Score=42.68 Aligned_cols=56 Identities=7% Similarity=0.100 Sum_probs=42.8
Q ss_pred EEEEecCCCchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcc-ccccccccccCCC
Q 008311 509 IFLYGGDDVEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESW-QPLQLKSLVTSGK 569 (570)
Q Consensus 509 I~lYfgad~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~-~~~~~~~~~~~~~ 569 (570)
|-+|+...|++|+...+.|.+. +++|+.+-|. +...+.+.+.. +...+|++.++|+
T Consensus 8 v~~y~~~~C~~C~~~~~~L~~~----~i~~~~vdv~-~~~~~~l~~~~~~~~~vP~l~~~g~ 64 (89)
T 2klx_A 8 IILYTRPNCPYCKRARDLLDKK----GVKYTDIDAS-TSLRQEMVQRANGRNTFPQIFIGDY 64 (89)
T ss_dssp EEEESCSCCTTTHHHHHHHHHH----TCCEEEECSC-HHHHHHHHHHHHSSCCSCEEEETTE
T ss_pred EEEEECCCChhHHHHHHHHHHc----CCCcEEEECC-HHHHHHHHHHhCCCCCcCEEEECCE
Confidence 5677777799999887777654 7888888776 34455677766 8889999988885
No 450
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=91.89 E-value=0.17 Score=46.30 Aligned_cols=56 Identities=11% Similarity=-0.132 Sum_probs=40.9
Q ss_pred ccCCeEEEEEecC-C-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhccccccc
Q 008311 503 IKEGKYIFLYGGD-D-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQL 561 (570)
Q Consensus 503 ~~egk~I~lYfga-d-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~ 561 (570)
...||.+.|||.+ . |++|+.-.+.+.++|++ ..+++|.|+.|.++ ..++..+..++
T Consensus 41 ~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~~v~vv~Is~D~~~-~~~~~~~~~~~ 98 (175)
T 1xvq_A 41 QFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA--SGATVLCVSKDLPF-AQKRFCGAEGT 98 (175)
T ss_dssp GGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH--TTCEEEEEESSCHH-HHTTCC-----
T ss_pred HcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh--cCCEEEEEECCCHH-HHHHHHHHcCC
Confidence 3578888888864 4 99999999999999988 77999999998654 44555554444
No 451
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=91.77 E-value=0.13 Score=40.56 Aligned_cols=56 Identities=16% Similarity=0.173 Sum_probs=39.0
Q ss_pred EEEEecCCCchHHHHHHHHHHHHhhCCCCEEEEEEecCCc-hhhhhhccccccccccccCCC
Q 008311 509 IFLYGGDDVEWVRKFTTAARSVANTARIPLEMVYVGKSTK-RDKCGESWQPLQLKSLVTSGK 569 (570)
Q Consensus 509 I~lYfgad~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~-~e~~~~~~~~~~~~~~~~~~~ 569 (570)
|-+|+...|++|+...+.|.+ .+.+|+.+-+..+.. .+.+++ ++...+|++.++|+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~----~~i~~~~vdi~~~~~~~~~~~~-~g~~~vP~~~~~g~ 59 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMEN----RGFDFEMINVDRVPEAAEALRA-QGFRQLPVVIAGDL 59 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHH----TTCCCEEEETTTCHHHHHHHHH-TTCCSSCEEEETTE
T ss_pred EEEEcCCCChhHHHHHHHHHH----CCCCeEEEECCCCHHHHHHHHH-hCCCccCEEEECCE
Confidence 456777779999987777655 478888777765432 233333 57788999988774
No 452
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=91.61 E-value=0.3 Score=43.82 Aligned_cols=56 Identities=9% Similarity=-0.233 Sum_probs=43.8
Q ss_pred ccCCeEEEEEecC-C-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccc
Q 008311 503 IKEGKYIFLYGGD-D-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQ 560 (570)
Q Consensus 503 ~~egk~I~lYfga-d-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~ 560 (570)
...||.+-|||-+ . |++|+.-.+.+.++|++. ..++++.|+.|.++ ..++..+..+
T Consensus 39 ~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d~~~-~~~~~~~~~~ 96 (163)
T 1psq_A 39 DFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-DNTVVLTVSMDLPF-AQKRWCGAEG 96 (163)
T ss_dssp GGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHH-HHHHHHHHHT
T ss_pred HhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-CCcEEEEEECCCHH-HHHHHHHhcC
Confidence 4579999999853 4 999999999999999877 78999999998653 4455444433
No 453
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=91.47 E-value=0.19 Score=45.29 Aligned_cols=56 Identities=13% Similarity=-0.132 Sum_probs=42.9
Q ss_pred ccCCeEEEEEec--CCCchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhccccccc
Q 008311 503 IKEGKYIFLYGG--DDVEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQL 561 (570)
Q Consensus 503 ~~egk~I~lYfg--ad~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~ 561 (570)
...||.+-|+|. ..|++|+.=.+.+.++|++ ..++++.|+.|.+ +..++..+..++
T Consensus 43 ~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~--~~~~vv~is~d~~-~~~~~~~~~~~~ 100 (166)
T 3p7x_A 43 DYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK--EEGIVLTISADLP-FAQKRWCASAGL 100 (166)
T ss_dssp GGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT--TTSEEEEEESSCH-HHHHHHHHHHTC
T ss_pred HhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc--CCCEEEEEECCCH-HHHHHHHHHcCC
Confidence 457888777774 4499999999999999877 7899999998764 455555554444
No 454
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=91.46 E-value=0.56 Score=40.25 Aligned_cols=22 Identities=18% Similarity=0.217 Sum_probs=16.0
Q ss_pred HHHHhCCCCCCceEEEECCCCcEEc
Q 008311 431 YVKDVWHFKNKPILVVLDPQGRVVS 455 (570)
Q Consensus 431 ~L~~~y~V~~IPtlVVLDpqGkVv~ 455 (570)
.+++..|...+|++++ +|+.+.
T Consensus 61 ~l~~~~g~~tvP~vfi---~g~~ig 82 (114)
T 3h8q_A 61 VLSEITNQKTVPNIFV---NKVHVG 82 (114)
T ss_dssp HHHHHHSCCSSCEEEE---TTEEEE
T ss_pred HHHHHhCCCccCEEEE---CCEEEe
Confidence 3555667888999877 777764
No 455
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=91.45 E-value=0.37 Score=43.45 Aligned_cols=57 Identities=7% Similarity=-0.189 Sum_probs=45.6
Q ss_pred ccCCeEEEEEec-C-CCchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhccccccc
Q 008311 503 IKEGKYIFLYGG-D-DVEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQL 561 (570)
Q Consensus 503 ~~egk~I~lYfg-a-d~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~ 561 (570)
...||.+-|||. + .|++|+.=.+.+.+.|++. ..++++.||.|.+ +..++..+..++
T Consensus 40 ~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~~v~vv~Is~d~~-~~~~~~~~~~~~ 98 (165)
T 1q98_A 40 DFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-SNTIVLCISADLP-FAQARFCGAEGI 98 (165)
T ss_dssp GGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-TTEEEEEEESSCH-HHHTTCTTTTTC
T ss_pred HhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-CCCEEEEEeCCCH-HHHHHHHHHcCC
Confidence 457898888884 4 4999999999999999887 7899999999764 456666666555
No 456
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=91.42 E-value=0.28 Score=46.71 Aligned_cols=54 Identities=15% Similarity=-0.029 Sum_probs=42.9
Q ss_pred ccCCeEEEEEec-CC-CchHHHHHHHHHHHHhh-CCCCEEEEEEecCCchhhhhhccc
Q 008311 503 IKEGKYIFLYGG-DD-VEWVRKFTTAARSVANT-ARIPLEMVYVGKSTKRDKCGESWQ 557 (570)
Q Consensus 503 ~~egk~I~lYfg-ad-~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d~~~e~~~~~~~ 557 (570)
...||.+.|||. +. |++|+.-.+.+.++|++ .+..+++|.||.|.++ ..++..+
T Consensus 45 d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~-~~~~~~~ 101 (211)
T 2pn8_A 45 DYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQF-THLAWIN 101 (211)
T ss_dssp GGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHH-HHHHHHT
T ss_pred HhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHH-HHHHHHH
Confidence 357899999997 77 99999999999999876 3468999999998654 3444444
No 457
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=91.41 E-value=0.17 Score=50.23 Aligned_cols=59 Identities=12% Similarity=0.125 Sum_probs=46.7
Q ss_pred CCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 505 EGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 505 egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
.|+.|.|+|.+. |++|+.+.|.+.+++++.. .+-++.|..+. ..+.+.+++..+||+++
T Consensus 132 ~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~-~v~f~kVd~d~--~~l~~~~~I~~~PTll~ 191 (245)
T 1a0r_P 132 KITTIVVHIYEDGIKGCDALNSSLICLAAEYP-MVKFCKIKASN--TGAGDRFSSDVLPTLLV 191 (245)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT-TSEEEEEEHHH--HCCTTSSCTTTCSEEEE
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CCEEEEEeCCc--HHHHHHCCCCCCCEEEE
Confidence 488999999999 9999999999999998743 35556665544 45667788889999875
No 458
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=91.41 E-value=0.14 Score=41.58 Aligned_cols=58 Identities=5% Similarity=0.060 Sum_probs=43.5
Q ss_pred EEEEEecCCCchHHHHHHHHHHHHhhCCCCEEEEEEecCC-chhhhhhccccccccccccCCC
Q 008311 508 YIFLYGGDDVEWVRKFTTAARSVANTARIPLEMVYVGKST-KRDKCGESWQPLQLKSLVTSGK 569 (570)
Q Consensus 508 ~I~lYfgad~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~-~~e~~~~~~~~~~~~~~~~~~~ 569 (570)
.|-+|+...|++|+...+.|.+ .+.+||.+-|..+. ..+.+++..+...+|++.++|+
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~----~~i~~~~~di~~~~~~~~~l~~~~~~~~vP~l~~~g~ 65 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLAR----KGAEFNEIDASATPELRAEMQERSGRNTFPQIFIGSV 65 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHH----TTCCCEEEESTTSHHHHHHHHHHHTSSCCCEEEETTE
T ss_pred cEEEEECCCChhHHHHHHHHHH----cCCCcEEEECCCCHHHHHHHHHHhCCCCcCEEEECCE
Confidence 3668888789999987766654 48899998887653 2345666778888999888875
No 459
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=91.32 E-value=0.059 Score=47.76 Aligned_cols=60 Identities=3% Similarity=-0.109 Sum_probs=43.2
Q ss_pred eEEEEEecCC-CchHHHHHHHHHHHHhh--CCCCEEEEEEecCCch-hhhhhcccccccccccc
Q 008311 507 KYIFLYGGDD-VEWVRKFTTAARSVANT--ARIPLEMVYVGKSTKR-DKCGESWQPLQLKSLVT 566 (570)
Q Consensus 507 k~I~lYfgad-~~w~r~FT~~l~~vy~~--~~~~fEiv~Vs~d~~~-e~~~~~~~~~~~~~~~~ 566 (570)
..+-++|.++ |+||+.|.+.+...|+. .+..+.++.|.-+.+. +....-.++..+|||++
T Consensus 19 ~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~ 82 (116)
T 3dml_A 19 ELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVL 82 (116)
T ss_dssp CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEE
T ss_pred CCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEE
Confidence 4577888888 99999999877766653 2334777777776643 34445557889999986
No 460
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=91.11 E-value=0.1 Score=47.84 Aligned_cols=62 Identities=5% Similarity=0.018 Sum_probs=49.4
Q ss_pred cCCeEEEEEecCC---CchHHHHHHHHHHHHhhCCCC-EEEEEEecCCchhhhhhcccccccccccc
Q 008311 504 KEGKYIFLYGGDD---VEWVRKFTTAARSVANTARIP-LEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 504 ~egk~I~lYfgad---~~w~r~FT~~l~~vy~~~~~~-fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
..++.+.++|.++ |+|||...|.+.+++++.+.. +.++-|.-|.. .+.-.-+++.+||||++
T Consensus 32 ~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~-~~lA~~ygV~sIPTlil 97 (140)
T 2qgv_A 32 TQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQS-EAIGDRFGAFRFPATLV 97 (140)
T ss_dssp HTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHH-HHHHHHHTCCSSSEEEE
T ss_pred hCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCC-HHHHHHcCCccCCEEEE
Confidence 3444556677776 789999999999999886666 88888888754 46777789999999975
No 461
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=91.08 E-value=0.096 Score=44.98 Aligned_cols=59 Identities=8% Similarity=0.040 Sum_probs=44.1
Q ss_pred eEEEEEecCCCchHHHHHHHHHHHHhhCCCC---EEEEEEecCCc----hhhhhhccccccccccccCCC
Q 008311 507 KYIFLYGGDDVEWVRKFTTAARSVANTARIP---LEMVYVGKSTK----RDKCGESWQPLQLKSLVTSGK 569 (570)
Q Consensus 507 k~I~lYfgad~~w~r~FT~~l~~vy~~~~~~---fEiv~Vs~d~~----~e~~~~~~~~~~~~~~~~~~~ 569 (570)
..|-+|+...|++|+...+.|.+ .+.+ |+.+-|..+.+ .+.+.+..+...+|++.++|+
T Consensus 19 ~~vv~f~~~~Cp~C~~~~~~L~~----~~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i~g~ 84 (114)
T 2hze_A 19 NKVTIFVKYTCPFCRNALDILNK----FSFKRGAYEIVDIKEFKPENELRDYFEQITGGKTVPRIFFGKT 84 (114)
T ss_dssp TCEEEEECTTCHHHHHHHHHHTT----SCBCTTSEEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEETTE
T ss_pred CCEEEEEeCCChhHHHHHHHHHH----cCCCcCceEEEEccCCCChHHHHHHHHHHhCCCCcCEEEECCE
Confidence 44667777779999877766644 4666 99888887742 346777778889999999885
No 462
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=90.93 E-value=0.19 Score=48.52 Aligned_cols=52 Identities=8% Similarity=-0.151 Sum_probs=41.6
Q ss_pred CCeEEEEEec-CC-CchHHHHHHHHHHHHhh-CCCCEEEEEEecCCchhhhhhccc
Q 008311 505 EGKYIFLYGG-DD-VEWVRKFTTAARSVANT-ARIPLEMVYVGKSTKRDKCGESWQ 557 (570)
Q Consensus 505 egk~I~lYfg-ad-~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d~~~e~~~~~~~ 557 (570)
.||.+-|||. +. |++|+.-.+.+.++|++ .+..+++|.||.|.++ ..++..+
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~-~~~~~~~ 109 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVY-SHLAWKN 109 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHH-HHHHHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHH-HHHHHHH
Confidence 8999999997 77 99999999999999876 3457999999997654 3444443
No 463
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=90.87 E-value=0.25 Score=44.04 Aligned_cols=53 Identities=2% Similarity=-0.058 Sum_probs=38.1
Q ss_pred cCCe--EEEEEe--cCCCchHHHHHHHHHHHHhh-CCCCEEEEEEecCCchhhhhhcccc
Q 008311 504 KEGK--YIFLYG--GDDVEWVRKFTTAARSVANT-ARIPLEMVYVGKSTKRDKCGESWQP 558 (570)
Q Consensus 504 ~egk--~I~lYf--gad~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d~~~e~~~~~~~~ 558 (570)
..|| .+-||| +..|++|+.-.+.+.++|++ .+.. +++.|+.|.+ +.+++..+.
T Consensus 31 ~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d~~-~~~~~~~~~ 88 (159)
T 2a4v_A 31 ITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSADSV-TSQKKFQSK 88 (159)
T ss_dssp HHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESCCH-HHHHHHHHH
T ss_pred HhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCCCH-HHHHHHHHH
Confidence 3455 777776 55699999999999999875 3334 9999998854 444554443
No 464
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=90.80 E-value=0.27 Score=47.11 Aligned_cols=46 Identities=22% Similarity=0.114 Sum_probs=39.0
Q ss_pred ccCCeEEEEEec-CC-CchHHHHHHHHHHHHhh-CCCCEEEEEEecCCc
Q 008311 503 IKEGKYIFLYGG-DD-VEWVRKFTTAARSVANT-ARIPLEMVYVGKSTK 548 (570)
Q Consensus 503 ~~egk~I~lYfg-ad-~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d~~ 548 (570)
...||.+.|||. ++ |++|+...+.+.++|++ .+..++++.|+.|..
T Consensus 53 d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~ 101 (220)
T 1zye_A 53 DFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSH 101 (220)
T ss_dssp GGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCH
T ss_pred HhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCH
Confidence 357899999997 77 99999999999999876 345799999999864
No 465
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=90.63 E-value=0.27 Score=45.63 Aligned_cols=54 Identities=9% Similarity=-0.020 Sum_probs=41.0
Q ss_pred ccCCeEEEEEec--CCCchHHHHHHHHHHHHhh-CCCCEEEEEEecCCchhhhhhccc
Q 008311 503 IKEGKYIFLYGG--DDVEWVRKFTTAARSVANT-ARIPLEMVYVGKSTKRDKCGESWQ 557 (570)
Q Consensus 503 ~~egk~I~lYfg--ad~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d~~~e~~~~~~~ 557 (570)
...||.+-|+|- ..|++|+.-.+.+.++|++ .+..++++.||.|.++ ..++..+
T Consensus 27 ~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~-~~~~~~~ 83 (186)
T 1n8j_A 27 DTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHF-THKAWHS 83 (186)
T ss_dssp HHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHH-HHHHHHH
T ss_pred HHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHH-HHHHHHH
Confidence 357898888884 4599999999999999875 3457999999998653 3444443
No 466
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.60 E-value=0.91 Score=42.77 Aligned_cols=85 Identities=9% Similarity=0.086 Sum_probs=50.8
Q ss_pred ccCCCEEEEEEecCCCHHhHHHH---HH--HHHHHHhhhhhccCCCeEEEEEecccCCCCCChhhHHHHHHHHcCCCcee
Q 008311 343 VLRRKNVLLLISDLDISQEELSI---LE--QIYNESRLHLTRQESHYEVVWIPIVDHFIHWDDPTQKKFETLQSSMPWYT 417 (570)
Q Consensus 343 ~LkGKvVlL~FwAsWCpPCr~e~---L~--~iY~elk~~~~k~~~~fEIV~IsIvD~s~~w~D~~~~~F~~~~~~MPW~a 417 (570)
.-.+|.+++|+...||+.|..|- |. ++-+-+++ +|-+...++ + .++..+.|-.+..+
T Consensus 52 k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~-------nfV~w~~dv-~-----~~e~~~~~~~~~~~----- 113 (178)
T 2ec4_A 52 ARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ-------NFITWAWDL-T-----KDSNRARFLTMCNR----- 113 (178)
T ss_dssp TTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH-------TEEEEEEEC-C-----SHHHHHHHHHHHHH-----
T ss_pred hhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc-------CEEEEEEeC-C-----Cchhhhhhhhhhhh-----
Confidence 34689999999999999999886 22 23333432 475555554 1 23334444332210
Q ss_pred eccccccChHHHHHHHHhCCCCCCceEEEECCCC
Q 008311 418 VYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQG 451 (570)
Q Consensus 418 V~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqG 451 (570)
.+ ... .....+.|++.+.|++++|+++|
T Consensus 114 -~~----g~~-~a~~~~~~~~~~~P~l~ii~~~~ 141 (178)
T 2ec4_A 114 -HF----GSV-VAQTIRTQKTDQFPLFLIIMGKR 141 (178)
T ss_dssp -HT----CHH-HHHHHHHSCSTTCSEEEEECCCS
T ss_pred -hh----HHH-HHHHHhhcCCCCCCeEEEEEcCC
Confidence 00 101 11223458999999999999875
No 467
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=90.58 E-value=0.42 Score=48.41 Aligned_cols=38 Identities=16% Similarity=0.252 Sum_probs=30.2
Q ss_pred CCCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEec
Q 008311 345 RRKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPI 391 (570)
Q Consensus 345 kGKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsI 391 (570)
.||.++..|+...||.|+++. |.+.++.. .+.++.+|+
T Consensus 146 ~gk~~I~vFtDp~CPYCkkl~~~l~~~l~~~---------~Vr~i~~Pi 185 (273)
T 3tdg_A 146 NKDKILYIVSDPMCPHCQKELTKLRDHLKEN---------TVRMVVVGW 185 (273)
T ss_dssp GTTCEEEEEECTTCHHHHHHHHTHHHHHHHC---------EEEEEECCC
T ss_pred CCCeEEEEEECcCChhHHHHHHHHHHHhhCC---------cEEEEEeec
Confidence 689999999999999999998 77666532 356677776
No 468
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=90.34 E-value=0.29 Score=42.48 Aligned_cols=58 Identities=9% Similarity=0.095 Sum_probs=42.9
Q ss_pred EEEEecCCCchHHHHHHHHHHHHhhCC---CCEEEEEEecCCc----hhhhhhccccccccccccCCC
Q 008311 509 IFLYGGDDVEWVRKFTTAARSVANTAR---IPLEMVYVGKSTK----RDKCGESWQPLQLKSLVTSGK 569 (570)
Q Consensus 509 I~lYfgad~~w~r~FT~~l~~vy~~~~---~~fEiv~Vs~d~~----~e~~~~~~~~~~~~~~~~~~~ 569 (570)
|-+|+...|++|+.. |+.+.++.+ .+|+.+-|..+.+ .+.+++..+...+|++.++|+
T Consensus 27 Vvvf~~~~Cp~C~~a---lk~~L~~~~~~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~vfi~g~ 91 (118)
T 3c1r_A 27 IFVASKTYCPYCHAA---LNTLFEKLKVPRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNIYINGK 91 (118)
T ss_dssp EEEEECSSCHHHHHH---HHHHHTTSCCCGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEETTE
T ss_pred EEEEEcCCCcCHHHH---HHHHHHHcCCCCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEEEECCE
Confidence 667877779999876 244445556 8888888877653 346777778889999998885
No 469
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=90.04 E-value=0.4 Score=45.42 Aligned_cols=60 Identities=17% Similarity=0.132 Sum_probs=46.6
Q ss_pred CeEEEEEecC-------C-CchHHHHHHHHHHHHhhCC-----CCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 506 GKYIFLYGGD-------D-VEWVRKFTTAARSVANTAR-----IPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 506 gk~I~lYfga-------d-~~w~r~FT~~l~~vy~~~~-----~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
+..+-++|.+ . |.|||.|.|.+.+++++-+ .++-++-|.-|... ++-+-+++..+|+|.+
T Consensus 37 ~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~-~la~~~~I~siPtl~~ 109 (178)
T 3ga4_A 37 GYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVP-QLVKDLKLQNVPHLVV 109 (178)
T ss_dssp TCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCH-HHHHHTTCCSSCEEEE
T ss_pred CCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCH-HHHHHcCCCCCCEEEE
Confidence 5567777766 4 9999999999999987532 67778888777744 5666689999999864
No 470
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.03 E-value=0.34 Score=42.76 Aligned_cols=57 Identities=5% Similarity=0.085 Sum_probs=43.2
Q ss_pred EEEEecCCCchHHHHHHHHHHHHhhCCCCEEEEEEecCCch----hhhhhccccccccccccCCC
Q 008311 509 IFLYGGDDVEWVRKFTTAARSVANTARIPLEMVYVGKSTKR----DKCGESWQPLQLKSLVTSGK 569 (570)
Q Consensus 509 I~lYfgad~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~----e~~~~~~~~~~~~~~~~~~~ 569 (570)
|-+|+...|++|+...+.|.+. +..|+.+-|..+... +.+.+..+...+|++.++|+
T Consensus 29 vvvf~~~~Cp~C~~~~~~L~~~----~i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~i~G~ 89 (130)
T 2cq9_A 29 VVIFSKTSCSYCTMAKKLFHDM----NVNYKVVELDLLEYGNQFQDALYKMTGERTVPRIFVNGT 89 (130)
T ss_dssp EEEEECSSCSHHHHHHHHHHHH----TCCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEEETTE
T ss_pred EEEEEcCCChHHHHHHHHHHHc----CCCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEEECCE
Confidence 5567766699999888877665 788988888776322 24677778889999998885
No 471
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=89.70 E-value=0.44 Score=41.44 Aligned_cols=59 Identities=14% Similarity=0.317 Sum_probs=43.4
Q ss_pred eEEEEEecCCCchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhcccccccccc--ccCCC
Q 008311 507 KYIFLYGGDDVEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSL--VTSGK 569 (570)
Q Consensus 507 k~I~lYfgad~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~--~~~~~ 569 (570)
..|-+|+...|++|+...+.|.++..+.+..|+.|=|.. +.+-..+ ++. .+|+| .++|+
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~i~~~~vDId~--d~~l~~~-ygv-~VP~l~~~~dG~ 90 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSWFELEVINIDG--NEHLTRL-YND-RVPVLFAVNEDK 90 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSCCCCEEEETTT--CHHHHHH-STT-SCSEEEETTTTE
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcCCeEEEEECCC--CHHHHHH-hCC-CCceEEEEECCE
Confidence 447777777799999999999999888787777666653 3343333 454 49999 77885
No 472
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=89.42 E-value=0.35 Score=40.86 Aligned_cols=61 Identities=7% Similarity=0.083 Sum_probs=46.3
Q ss_pred CCeEEEEEecCCCchHHHHHHHHHHHHhhCCCCEEEEEEecCCc-hhhhhhcc-ccccccccccCCC
Q 008311 505 EGKYIFLYGGDDVEWVRKFTTAARSVANTARIPLEMVYVGKSTK-RDKCGESW-QPLQLKSLVTSGK 569 (570)
Q Consensus 505 egk~I~lYfgad~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~-~e~~~~~~-~~~~~~~~~~~~~ 569 (570)
....|-||....||+|++-...|.+. +++||.+-|..+.. .+.+++.. +...+|.+.++|+
T Consensus 14 ~~~~v~vy~~~~Cp~C~~ak~~L~~~----~i~y~~idI~~~~~~~~~l~~~~~g~~~vP~ifi~g~ 76 (99)
T 3qmx_A 14 VSAKIEIYTWSTCPFCMRALALLKRK----GVEFQEYCIDGDNEAREAMAARANGKRSLPQIFIDDQ 76 (99)
T ss_dssp CCCCEEEEECTTCHHHHHHHHHHHHH----TCCCEEEECTTCHHHHHHHHHHTTTCCCSCEEEETTE
T ss_pred CCCCEEEEEcCCChhHHHHHHHHHHC----CCCCEEEEcCCCHHHHHHHHHHhCCCCCCCEEEECCE
Confidence 44567899888899998777666554 88999998887643 34455555 7888999999885
No 473
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=89.40 E-value=0.5 Score=39.61 Aligned_cols=58 Identities=12% Similarity=0.329 Sum_probs=43.5
Q ss_pred eEEEEEecCCCchHHHHHHHHHHHHhhCCCCEEEEEEecCCch--hh----hhhccccccccccccCC
Q 008311 507 KYIFLYGGDDVEWVRKFTTAARSVANTARIPLEMVYVGKSTKR--DK----CGESWQPLQLKSLVTSG 568 (570)
Q Consensus 507 k~I~lYfgad~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~--e~----~~~~~~~~~~~~~~~~~ 568 (570)
..|-+|+...||+|+.--+.|.+. +.++|.+-|..++++ ++ +++......+|+++++|
T Consensus 22 ~~v~ly~~~~Cp~C~~ak~~L~~~----~i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i~~ 85 (103)
T 3nzn_A 22 GKVIMYGLSTCVWCKKTKKLLTDL----GVDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTIIND 85 (103)
T ss_dssp SCEEEEECSSCHHHHHHHHHHHHH----TBCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEETT
T ss_pred CeEEEEcCCCCchHHHHHHHHHHc----CCCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEECC
Confidence 457788888899998877777654 889999999885432 22 23445778899999987
No 474
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=89.19 E-value=0.4 Score=42.53 Aligned_cols=58 Identities=9% Similarity=0.112 Sum_probs=43.9
Q ss_pred EEEEecCCCchHHHHHHHHHHHHhhCC---CCEEEEEEecCCc----hhhhhhccccccccccccCCC
Q 008311 509 IFLYGGDDVEWVRKFTTAARSVANTAR---IPLEMVYVGKSTK----RDKCGESWQPLQLKSLVTSGK 569 (570)
Q Consensus 509 I~lYfgad~~w~r~FT~~l~~vy~~~~---~~fEiv~Vs~d~~----~e~~~~~~~~~~~~~~~~~~~ 569 (570)
|-+|+...||+|+.. |+.+.++.+ .++|.+-|..+.. ++.+++..+...+|.+.++|+
T Consensus 39 Vvvy~~~~Cp~C~~a---~k~~L~~~~~~~i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~vfi~g~ 103 (129)
T 3ctg_A 39 VFVAAKTYCPYCKAT---LSTLFQELNVPKSKALVLELDEMSNGSEIQDALEEISGQKTVPNVYINGK 103 (129)
T ss_dssp EEEEECTTCHHHHHH---HHHHHTTSCCCGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEETTE
T ss_pred EEEEECCCCCchHHH---HHHHHHhcCccCCCcEEEEccccCCHHHHHHHHHHHhCCCCCCEEEECCE
Confidence 678888889999866 244445556 8999999988764 346777777788999998885
No 475
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=89.07 E-value=0.51 Score=38.26 Aligned_cols=57 Identities=14% Similarity=0.182 Sum_probs=41.1
Q ss_pred EEEEecC----CCchHHHHHHHHHHHHhhCCCCEEEEEEe-----cCC-chhhhhhccccc-----ccccccc-CCC
Q 008311 509 IFLYGGD----DVEWVRKFTTAARSVANTARIPLEMVYVG-----KST-KRDKCGESWQPL-----QLKSLVT-SGK 569 (570)
Q Consensus 509 I~lYfga----d~~w~r~FT~~l~~vy~~~~~~fEiv~Vs-----~d~-~~e~~~~~~~~~-----~~~~~~~-~~~ 569 (570)
|-||+.. .|++|++ ++++-++.++++|.+-|. .+. .++.+++..+.- ..|.+.+ +|+
T Consensus 2 v~iY~~~~~~~~Cp~C~~----ak~~L~~~gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~i~~g~ 74 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDN----AKRLLTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFAPDGS 74 (87)
T ss_dssp EEEEECCTTTSCCHHHHH----HHHHHHHTTCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEECTTSC
T ss_pred EEEEEeCCCCCcCccHHH----HHHHHHHcCCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEEEECCE
Confidence 5689988 8999965 445556679999999998 332 224566665666 7899998 875
No 476
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=89.06 E-value=0.57 Score=50.65 Aligned_cols=63 Identities=11% Similarity=0.099 Sum_probs=46.7
Q ss_pred CCeE-EEEEecCCCchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhccccccccccccCCC
Q 008311 505 EGKY-IFLYGGDDVEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVTSGK 569 (570)
Q Consensus 505 egk~-I~lYfgad~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~~~~ 569 (570)
.++. |-+|++..|++|+.+.+.+.+++.+.. ++++.-|.-|...+ +.+-+++..+|+++++|+
T Consensus 116 ~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~-~v~~~~vd~~~~~~-~~~~~~i~svPt~~i~g~ 179 (521)
T 1hyu_A 116 DGDFEFETYYSLSCHNCPDVVQALNLMAVLNP-RIKHTAIDGGTFQN-EITERNVMGVPAVFVNGK 179 (521)
T ss_dssp CSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-TEEEEEEETTTCHH-HHHHTTCCSSSEEEETTE
T ss_pred CCCcceEEEECCCCcCcHHHHHHHHHHHhHcC-ceEEEEEechhhHH-HHHHhCCCccCEEEECCE
Confidence 3444 555556569999999999999876643 67777777665554 444458999999999885
No 477
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=88.91 E-value=0.44 Score=49.21 Aligned_cols=63 Identities=6% Similarity=0.081 Sum_probs=50.6
Q ss_pred ccCCeEEEEEecCC-CchHHHHHHHHHHHHhhC------CCCEEEEEEecCCchhhhhhcccccccccccc
Q 008311 503 IKEGKYIFLYGGDD-VEWVRKFTTAARSVANTA------RIPLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 503 ~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~------~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
+.+++.+.++|.+. |++|+.+.|.+.+++++. +..+-++-|..+...+ +.+-+++-+.||+++
T Consensus 19 ~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~-l~~~~~v~~~Pt~~~ 88 (382)
T 2r2j_A 19 LNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSD-IAQRYRISKYPTLKL 88 (382)
T ss_dssp HHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHH-HHHHTTCCEESEEEE
T ss_pred HhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHH-HHHhcCCCcCCEEEE
Confidence 34688999999999 999999999999998753 4458888888877644 555678889999876
No 478
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=88.71 E-value=0.47 Score=43.04 Aligned_cols=58 Identities=5% Similarity=0.080 Sum_probs=44.0
Q ss_pred EEEEEecCCCchHHHHHHHHHHHHhhCCCCEEEEEEecCCch----hhhhhccccccccccccCCC
Q 008311 508 YIFLYGGDDVEWVRKFTTAARSVANTARIPLEMVYVGKSTKR----DKCGESWQPLQLKSLVTSGK 569 (570)
Q Consensus 508 ~I~lYfgad~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~----e~~~~~~~~~~~~~~~~~~~ 569 (570)
.|-+|+...|++|+..-+.|.+. ++.|+.+-|..+... +.+.+..+...+|++.++|+
T Consensus 50 ~Vvvf~~~~Cp~C~~~k~~L~~~----~i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~ifi~G~ 111 (146)
T 2ht9_A 50 CVVIFSKTSCSYCTMAKKLFHDM----NVNYKVVELDLLEYGNQFQDALYKMTGERTVPRIFVNGT 111 (146)
T ss_dssp SEEEEECTTCHHHHHHHHHHHHH----TCCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEEETTE
T ss_pred CEEEEECCCChhHHHHHHHHHHc----CCCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEEECCE
Confidence 35667777799999888877665 788998888776322 24667778889999998885
No 479
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.39 E-value=0.52 Score=40.54 Aligned_cols=62 Identities=11% Similarity=0.057 Sum_probs=45.9
Q ss_pred EEEEEecCCCchHHHHHH--HHHHHHhhCCCCEEEEEEecCC-chhhhhhcc--------ccccccccccCCC
Q 008311 508 YIFLYGGDDVEWVRKFTT--AARSVANTARIPLEMVYVGKST-KRDKCGESW--------QPLQLKSLVTSGK 569 (570)
Q Consensus 508 ~I~lYfgad~~w~r~FT~--~l~~vy~~~~~~fEiv~Vs~d~-~~e~~~~~~--------~~~~~~~~~~~~~ 569 (570)
-|-||....|++|+.|.. +++++-++.+++||.+-|..|. .++.+++.+ .....|.+.++|+
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~~gi~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g~~tvP~vfi~g~ 81 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLEANKIEFEEVDITMSEEQRQWMYKNVPPEKKPTQGNPLPPQIFNGDR 81 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHHTTCCEEEEETTTCHHHHHHHHHSCCTTTCCSSSSCCSCEEEETTE
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHhcccccccCCCCCCCEEEECCE
Confidence 477999888999997665 5556667789999999998763 234566654 5556888888874
No 480
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=88.34 E-value=0.57 Score=39.81 Aligned_cols=62 Identities=10% Similarity=0.125 Sum_probs=43.6
Q ss_pred ccCCeEEEEEec-----CCCchHHHHHHHHHHHHhhCCCCEEEEEEecCCc-hhhhhhccccccccccccCCC
Q 008311 503 IKEGKYIFLYGG-----DDVEWVRKFTTAARSVANTARIPLEMVYVGKSTK-RDKCGESWQPLQLKSLVTSGK 569 (570)
Q Consensus 503 ~~egk~I~lYfg-----ad~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~-~e~~~~~~~~~~~~~~~~~~~ 569 (570)
+...+ |-||.. ..|++|+.--..| ++.+++|+.+-|..|.. .+.+++..+...+|.+.++|+
T Consensus 12 i~~~~-vvvy~~g~~~~~~Cp~C~~ak~~L----~~~~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~ifi~g~ 79 (109)
T 1wik_A 12 TNKAS-VMLFMKGNKQEAKCGFSKQILEIL----NSTGVEYETFDILEDEEVRQGLKTFSNWPTYPQLYVRGD 79 (109)
T ss_dssp HTTSS-EEEEESSTTTCCCSSTHHHHHHHH----HHTCSCEEEEESSSCHHHHHHHHHHHSCCSSCEEECSSS
T ss_pred hccCC-EEEEEecCCCCCCCchHHHHHHHH----HHcCCCeEEEECCCCHHHHHHHHHHhCCCCCCEEEECCE
Confidence 34555 557876 5699997655444 55589999999987632 345666667778899998886
No 481
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=88.04 E-value=0.54 Score=51.05 Aligned_cols=61 Identities=8% Similarity=-0.061 Sum_probs=50.1
Q ss_pred CCeEEEEEecCC-CchHHHHHHHHHHHHhhCC---C-----CEEEEEEecCCchhhhhhcccccccccccc
Q 008311 505 EGKYIFLYGGDD-VEWVRKFTTAARSVANTAR---I-----PLEMVYVGKSTKRDKCGESWQPLQLKSLVT 566 (570)
Q Consensus 505 egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~---~-----~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~ 566 (570)
.+|.+.|+|.+. |++|+.+.|.+.+++++.. . .+.++.|.-|... .+.+-+++..+|++++
T Consensus 41 ~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~-~la~~y~V~~~PTlil 110 (470)
T 3qcp_A 41 PLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEV-DLCRKYDINFVPRLFF 110 (470)
T ss_dssp GGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCH-HHHHHTTCCSSCEEEE
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCH-HHHHHcCCCccCeEEE
Confidence 457899999999 9999999999999997633 2 5888999888764 5666778999999875
No 482
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=87.87 E-value=0.45 Score=40.09 Aligned_cols=58 Identities=10% Similarity=0.156 Sum_probs=41.2
Q ss_pred EEEEEecCCCchHHHHHHHHHHHHhhCCCCEEEEEEecCCch-hhhhhcc-cccccccccc-CCC
Q 008311 508 YIFLYGGDDVEWVRKFTTAARSVANTARIPLEMVYVGKSTKR-DKCGESW-QPLQLKSLVT-SGK 569 (570)
Q Consensus 508 ~I~lYfgad~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~-e~~~~~~-~~~~~~~~~~-~~~ 569 (570)
.|-||+...||+|+. +++.-++.|++||.+-|..|... +.+++.. +.-..|.+++ ||+
T Consensus 5 ~I~vYs~~~Cp~C~~----aK~~L~~~gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~i~Dg~ 65 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLR----LKTALTANRIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVKFADGS 65 (92)
T ss_dssp CEEEEECTTCSSHHH----HHHHHHHTTCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEEETTSC
T ss_pred cEEEEcCCCCHhHHH----HHHHHHhcCCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEEEeCCE
Confidence 377999888999965 55555667999999999876543 3344432 4567888877 564
No 483
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=87.82 E-value=0.46 Score=43.59 Aligned_cols=57 Identities=11% Similarity=-0.058 Sum_probs=41.9
Q ss_pred CCeEEEEEe--cCCCchHHH-HHHHHHHHHhh-CCCCE-EEEEEecCCchhhhhhcccccccc
Q 008311 505 EGKYIFLYG--GDDVEWVRK-FTTAARSVANT-ARIPL-EMVYVGKSTKRDKCGESWQPLQLK 562 (570)
Q Consensus 505 egk~I~lYf--gad~~w~r~-FT~~l~~vy~~-~~~~f-Eiv~Vs~d~~~e~~~~~~~~~~~~ 562 (570)
.||.+-|+| ++.|++|+. =.+.+.+.|++ .+..+ +++.||.|++ +..++..+..+++
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~-~~~~~~~~~~~~~ 91 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDS-FVMDAWGKAHGAD 91 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCH-HHHHHHHHHTTCT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCH-HHHHHHHHhcCCC
Confidence 787777766 666999999 88888888865 34568 9999998764 4556655555543
No 484
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=87.06 E-value=1.2 Score=43.34 Aligned_cols=48 Identities=17% Similarity=0.072 Sum_probs=39.8
Q ss_pred ccCCeEEEEEecC-C-CchHHHHHHHHHHHHhh-CCCCEEEEEEecCCchh
Q 008311 503 IKEGKYIFLYGGD-D-VEWVRKFTTAARSVANT-ARIPLEMVYVGKSTKRD 550 (570)
Q Consensus 503 ~~egk~I~lYfga-d-~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d~~~e 550 (570)
...||++-|+|.+ . |++|+.=.+.+.++|++ .+..++++.||.|.++.
T Consensus 74 d~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~ 124 (240)
T 3qpm_A 74 DYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFT 124 (240)
T ss_dssp GGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHH
T ss_pred HhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHH
Confidence 4579988888866 5 99999999999999976 45679999999987553
No 485
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=86.73 E-value=0.67 Score=38.13 Aligned_cols=61 Identities=11% Similarity=0.121 Sum_probs=44.3
Q ss_pred EEEEecCCCchHHHHHH--HHHHHHhhCCCCEEEEEEecCC-chhhhhhccc--cccccccccCCC
Q 008311 509 IFLYGGDDVEWVRKFTT--AARSVANTARIPLEMVYVGKST-KRDKCGESWQ--PLQLKSLVTSGK 569 (570)
Q Consensus 509 I~lYfgad~~w~r~FT~--~l~~vy~~~~~~fEiv~Vs~d~-~~e~~~~~~~--~~~~~~~~~~~~ 569 (570)
|-||....|+.|+-|.. .++++-++.|++||.+-|..|. .++.+++..+ ....|.+.++|+
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~~~~i~~~~~di~~~~~~~~~l~~~~g~~~~~vP~ifi~g~ 69 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILDGKRIQYQLVDISQDNALRDEMRTLAGNPKATPPQIVNGNH 69 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHHTTCCCEEEETTSCHHHHHHHHHHTTCTTCCSCEEEETTE
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHHhCCCCCCCCEEEECCE
Confidence 67898888999965544 3344446679999999998763 3445666666 668899988875
No 486
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=86.71 E-value=0.59 Score=39.33 Aligned_cols=60 Identities=10% Similarity=0.120 Sum_probs=42.7
Q ss_pred CCeEEEEEec-----CCCchHHHHHHHHHHHHhhCCCCEEEEEEecCCc-hhhhhhccccccccccccCCC
Q 008311 505 EGKYIFLYGG-----DDVEWVRKFTTAARSVANTARIPLEMVYVGKSTK-RDKCGESWQPLQLKSLVTSGK 569 (570)
Q Consensus 505 egk~I~lYfg-----ad~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~-~e~~~~~~~~~~~~~~~~~~~ 569 (570)
.++ |-+|+. ..|++|+.-.+.|.+. +.+|+.+-|..+.. .+.+++..+...+|++.++|+
T Consensus 16 ~~~-vvvf~~g~~~~~~C~~C~~~~~~L~~~----~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v~i~g~ 81 (105)
T 2yan_A 16 KAS-VMLFMKGNKQEAKCGFSKQILEILNST----GVEYETFDILEDEEVRQGLKAYSNWPTYPQLYVKGE 81 (105)
T ss_dssp SSS-EEEEESBCSSSBCTTHHHHHHHHHHHH----TCCCEEEEGGGCHHHHHHHHHHHTCCSSCEEEETTE
T ss_pred cCC-EEEEEecCCCCCCCccHHHHHHHHHHC----CCCeEEEECCCCHHHHHHHHHHHCCCCCCeEEECCE
Confidence 344 567775 5599998776666554 78899888876532 234566667888999998885
No 487
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=86.69 E-value=0.35 Score=45.14 Aligned_cols=37 Identities=14% Similarity=-0.005 Sum_probs=29.6
Q ss_pred CCEEEEEEecCCCHHhHHHH--HHHHHHHHhhhhhccCCCeEEEEEec
Q 008311 346 RKNVLLLISDLDISQEELSI--LEQIYNESRLHLTRQESHYEVVWIPI 391 (570)
Q Consensus 346 GKvVlL~FwAsWCpPCr~e~--L~~iY~elk~~~~k~~~~fEIV~IsI 391 (570)
+|++++.|++-|||+|+.+- |.++-+++ ++.+..+|+
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~---------~v~~~~~p~ 60 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA---------GTDIGKMHI 60 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH---------TSCCEEEEC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh---------CCeEEEEec
Confidence 78999999999999999998 77776655 245667776
No 488
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=85.93 E-value=0.58 Score=42.16 Aligned_cols=57 Identities=11% Similarity=0.007 Sum_probs=41.9
Q ss_pred cCCeEEEEEec--CCCchHH-HHHHHHHHHHhh-CCCCEE-EEEEecCCchhhhhhccccccc
Q 008311 504 KEGKYIFLYGG--DDVEWVR-KFTTAARSVANT-ARIPLE-MVYVGKSTKRDKCGESWQPLQL 561 (570)
Q Consensus 504 ~egk~I~lYfg--ad~~w~r-~FT~~l~~vy~~-~~~~fE-iv~Vs~d~~~e~~~~~~~~~~~ 561 (570)
..||.+-|+|- +.|++|+ .=.+.+.+.|++ .+..++ ++.||.|.+ +..++..+..++
T Consensus 33 ~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~-~~~~~~~~~~~~ 94 (162)
T 1tp9_A 33 VAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDP-FVMKAWAKSYPE 94 (162)
T ss_dssp HTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCH-HHHHHHHHTCTT
T ss_pred hCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCH-HHHHHHHHhcCC
Confidence 57888888874 4599999 678889888865 235788 999999864 455555555444
No 489
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=85.76 E-value=0.46 Score=40.31 Aligned_cols=57 Identities=9% Similarity=0.096 Sum_probs=41.9
Q ss_pred EEEEecCCCchHHHHHHHHHHHHhhCCCCEEEEEEecCCc-----hhhhhhccccccccccccCCC
Q 008311 509 IFLYGGDDVEWVRKFTTAARSVANTARIPLEMVYVGKSTK-----RDKCGESWQPLQLKSLVTSGK 569 (570)
Q Consensus 509 I~lYfgad~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~-----~e~~~~~~~~~~~~~~~~~~~ 569 (570)
|-+|+...||+|+.-.+.|. +.+++++.+-|..+.+ ++.+++..+...+|.+.++|+
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~----~~~i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~ifi~g~ 82 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFK----RLGVQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNVFVCGK 82 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHH----HTTCCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEEEETTE
T ss_pred EEEEECCCChhHHHHHHHHH----HcCCCCeEEEeecCCCChHHHHHHHHHHhCCCCcCEEEECCE
Confidence 77788777999986665554 4589999999988532 223555557778999998885
No 490
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=85.21 E-value=1.7 Score=41.17 Aligned_cols=52 Identities=13% Similarity=0.036 Sum_probs=30.0
Q ss_pred cCCCccccccccCCeEEE-EEecCCCchHHHHHHHH---HHHHhhCC--CCEEEEEEe
Q 008311 493 DGIDPLVLDWIKEGKYIF-LYGGDDVEWVRKFTTAA---RSVANTAR--IPLEMVYVG 544 (570)
Q Consensus 493 d~~d~~i~~~~~egk~I~-lYfgad~~w~r~FT~~l---~~vy~~~~--~~fEiv~Vs 544 (570)
.|.|+.....-..++.+- -||+-.|++|+.|.|.+ .++.++.+ ..|.-+-|.
T Consensus 100 ~g~~y~~l~~p~~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~ 157 (197)
T 1un2_A 100 DGKQYTTLEKPVAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVN 157 (197)
T ss_dssp BTTTEEECSSCCTTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECS
T ss_pred CCCCceEccCCCCCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccC
Confidence 345554322112244444 44555599999999998 88876643 444444443
No 491
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=85.19 E-value=0.77 Score=43.66 Aligned_cols=38 Identities=11% Similarity=0.060 Sum_probs=25.6
Q ss_pred CCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEE
Q 008311 505 EGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYV 543 (570)
Q Consensus 505 egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~V 543 (570)
++|.+-+.|++. ||+|++|-+.+.++ .+.+..+..+.+
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~-~~~~v~v~~~~~ 123 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEY-NDLGITVRYLAF 123 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHH-HHTTEEEEEEEC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHH-HhCCcEEEEEEC
Confidence 566655556555 99999999999995 444544444433
No 492
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=84.93 E-value=0.52 Score=48.03 Aligned_cols=55 Identities=5% Similarity=-0.032 Sum_probs=41.0
Q ss_pred EEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecCCc---hhhhhhccccccccccccCCC
Q 008311 511 LYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKSTK---RDKCGESWQPLQLKSLVTSGK 569 (570)
Q Consensus 511 lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~---~e~~~~~~~~~~~~~~~~~~~ 569 (570)
+.|+++ |++||++.|.+.+++++. +.+-+.+++. +.++.+.+++..+||+.++|+
T Consensus 202 V~F~A~WC~~Ck~l~p~le~lA~~l----~~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i~G~ 260 (291)
T 3kp9_A 202 TMYGAYWCPHCQDQKELFGAAFDQV----PYVECSPNGPGTPQAQECTEAGITSYPTWIINGR 260 (291)
T ss_dssp EEEECTTCHHHHHHHHHHGGGGGGS----CEEESCSSCSSSCCCHHHHTTTCCSTTEEEETTE
T ss_pred EEEECCCCHHHHHHHHHHHHHHHHc----CEEEEeecCchhhHHHHHHHcCCcccCeEEECCE
Confidence 456677 999999999999887553 3444444332 456777789999999999885
No 493
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=84.56 E-value=1.4 Score=42.47 Aligned_cols=55 Identities=7% Similarity=-0.032 Sum_probs=41.8
Q ss_pred cccCCeEEEEEecCC-CchHHHHHHHHHHHHhh-CCCCEEEEEEecCC-------chhhhhhccc
Q 008311 502 WIKEGKYIFLYGGDD-VEWVRKFTTAARSVANT-ARIPLEMVYVGKST-------KRDKCGESWQ 557 (570)
Q Consensus 502 ~~~egk~I~lYfgad-~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d~-------~~e~~~~~~~ 557 (570)
....||.+-|+|.+. |++|++ .+.|.++|++ .+..|+++-|+.|. +.+++++.++
T Consensus 52 sd~~GKvvll~FwAt~C~~c~e-~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~~~~~~i~~f~~ 115 (215)
T 2i3y_A 52 KQYVGKHILFVNVATYCGLTAQ-YPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLK 115 (215)
T ss_dssp GGGTTSEEEEEEECSSSGGGGG-HHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHH
T ss_pred HHhCCCEEEEEEeCCCCCChHh-HHHHHHHHHHhccCCeEEEEEEccccCcCCCCCHHHHHHHHH
Confidence 356899999999988 999994 6789999876 34569999999652 3455555444
No 494
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=84.29 E-value=0.74 Score=43.22 Aligned_cols=41 Identities=5% Similarity=-0.058 Sum_probs=30.8
Q ss_pred cCCCEEEEEEecCCCHHhHHHH--H---HHHHHHHhhhhhccCCCeEEEEEec
Q 008311 344 LRRKNVLLLISDLDISQEELSI--L---EQIYNESRLHLTRQESHYEVVWIPI 391 (570)
Q Consensus 344 LkGKvVlL~FwAsWCpPCr~e~--L---~~iY~elk~~~~k~~~~fEIV~IsI 391 (570)
..+|++++.|+.-|||+|+.+- | .++-+++. +++.++++++
T Consensus 19 ~~~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~-------~~v~~~~~~~ 64 (191)
T 3l9s_A 19 VAGEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLP-------EGTKMTKYHV 64 (191)
T ss_dssp CCSSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSC-------TTCCEEEEEC
T ss_pred CCCCCeEEEEECCCChhHHHhChhccchHHHHHhCC-------CCcEEEEEec
Confidence 3568999999999999999998 4 35655552 3566777775
No 495
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=83.89 E-value=0.8 Score=43.58 Aligned_cols=37 Identities=11% Similarity=0.085 Sum_probs=27.0
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEE
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMV 541 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv 541 (570)
..||.+-+.|.+. ||+|++|-+.+.++.+. +..+..+
T Consensus 84 ~~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~-~v~v~~~ 121 (216)
T 1eej_A 84 PQEKHVITVFTDITCGYCHKLHEQMADYNAL-GITVRYL 121 (216)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHTTHHHHHHT-TEEEEEE
T ss_pred CCCCEEEEEEECCCCHHHHHHHHHHHHHHhC-CcEEEEE
Confidence 3577777777766 99999999999998653 4444433
No 496
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=83.84 E-value=2.1 Score=39.37 Aligned_cols=43 Identities=16% Similarity=-0.036 Sum_probs=33.4
Q ss_pred cCCeEEEEEecCC-CchHHHHHHHHHHHHhhCCCCEEEEEEecC
Q 008311 504 KEGKYIFLYGGDD-VEWVRKFTTAARSVANTARIPLEMVYVGKS 546 (570)
Q Consensus 504 ~egk~I~lYfgad-~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d 546 (570)
..|+.+.+.|.+. ||+|+.|.+.+.++.++.+..++++++.-+
T Consensus 23 ~~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~~ 66 (195)
T 3hd5_A 23 TPGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLKQVPIA 66 (195)
T ss_dssp STTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECC
T ss_pred CCCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCCeEEEEEecc
Confidence 3577666666666 999999999999998776557777777765
No 497
>4hoj_A REGF protein; GST, glutathione S-transferase, enzyme function initiative, structural genomics, transferase; HET: GSH; 1.40A {Neisseria gonorrhoeae}
Probab=82.86 E-value=1.2 Score=41.43 Aligned_cols=57 Identities=14% Similarity=0.107 Sum_probs=46.3
Q ss_pred EEEEecCCCchHHHHHHHHHHHHhhCCCCEEEEEEecCCchhhhhhccccccccccccCCC
Q 008311 509 IFLYGGDDVEWVRKFTTAARSVANTARIPLEMVYVGKSTKRDKCGESWQPLQLKSLVTSGK 569 (570)
Q Consensus 509 I~lYfgad~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~e~~~~~~~~~~~~~~~~~~~ 569 (570)
+=||++..||+||+=--.| .+.|+++|.+.|.-.+..+.+.+..-.=.+|.|+.+|.
T Consensus 4 m~LY~~~~sP~~~rvr~~L----~e~gi~~e~~~v~~~~~~~~~~~~nP~g~vPvL~~~~~ 60 (210)
T 4hoj_A 4 MTLYSGITCPFSHRCRFVL----YEKGMDFEIKDIDIYNKPEDLAVMNPYNQVPVLVERDL 60 (210)
T ss_dssp CEEEECTTCHHHHHHHHHH----HHHTCCCEEEECCTTSCCHHHHHHCTTCCSCEEEETTE
T ss_pred EEEecCCCChHHHHHHHHH----HHcCCCCEEEEeCCCCCCHHHHHHCCCCCCcEEEECCE
Confidence 4589998999998643333 45699999999998888888988887888999998875
No 498
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=82.70 E-value=1.2 Score=38.08 Aligned_cols=59 Identities=2% Similarity=0.046 Sum_probs=42.0
Q ss_pred eEEEEEecCCCchHHHHHHHHHHHHhhCCCCEEEEEEecCCch----hhhhhccccccccccccCCC
Q 008311 507 KYIFLYGGDDVEWVRKFTTAARSVANTARIPLEMVYVGKSTKR----DKCGESWQPLQLKSLVTSGK 569 (570)
Q Consensus 507 k~I~lYfgad~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~~----e~~~~~~~~~~~~~~~~~~~ 569 (570)
.-|-+|....||+|+.--..| ++.|.+|+.+-|..+... +.+++..+.-..|.+.++|+
T Consensus 17 ~~v~vy~~~~Cp~C~~ak~~L----~~~~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi~g~ 79 (114)
T 3h8q_A 17 SRVVIFSKSYCPHSTRVKELF----SSLGVECNVLELDQVDDGARVQEVLSEITNQKTVPNIFVNKV 79 (114)
T ss_dssp CSEEEEECTTCHHHHHHHHHH----HHTTCCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEETTE
T ss_pred CCEEEEEcCCCCcHHHHHHHH----HHcCCCcEEEEecCCCChHHHHHHHHHHhCCCccCEEEECCE
Confidence 346678777799997655555 445899999999875443 33445556778888888885
No 499
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=80.83 E-value=0.48 Score=42.62 Aligned_cols=54 Identities=9% Similarity=-0.046 Sum_probs=34.6
Q ss_pred ccCCeEEEEEe--cCCCchHHHHHHHHHHHHhh-CCCCEEEEEEecCCchhhhhhccc
Q 008311 503 IKEGKYIFLYG--GDDVEWVRKFTTAARSVANT-ARIPLEMVYVGKSTKRDKCGESWQ 557 (570)
Q Consensus 503 ~~egk~I~lYf--gad~~w~r~FT~~l~~vy~~-~~~~fEiv~Vs~d~~~e~~~~~~~ 557 (570)
...||.+-|+| +..|++|+.=.+.+.+.|++ .+..++++.||.|.++ ..++..+
T Consensus 27 d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~-~~~~~~~ 83 (157)
T 4g2e_A 27 ALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPF-SNKAFKE 83 (157)
T ss_dssp GGTTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHH-HHHHHHH
T ss_pred HHCCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchh-HHHHHHH
Confidence 46789888877 44499999988888888865 5678999999988654 3344333
No 500
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=80.80 E-value=14 Score=34.86 Aligned_cols=151 Identities=9% Similarity=0.065 Sum_probs=79.4
Q ss_pred CChhhHHHHHHHHcCCCceeeccccccChHHHHHHHHhCCCCCCceEEEECCCC-cEEccccchhHhhhcCCCCCCCchh
Q 008311 398 WDDPTQKKFETLQSSMPWYTVYHPTLIDRAVIRYVKDVWHFKNKPILVVLDPQG-RVVSPNALHMMWIWGSNAFPFTSLR 476 (570)
Q Consensus 398 w~D~~~~~F~~~~~~MPW~aV~fP~l~D~~~~~~L~~~y~V~~IPtlVVLDpqG-kVv~~na~~~I~~~G~~aFPFt~~~ 476 (570)
|.......|.+....++ .+.|-...+ ..+.+.|++++ |++++..+.. +....++.. -| +++...
T Consensus 38 ~~~~~~~~f~~~A~~l~--~~~F~~t~~----~~v~~~~~v~~-p~i~lfk~~~~~~~~~~~~~----~g----~~~~~~ 102 (227)
T 4f9z_D 38 LEIPAVPILHSMVQKFP--GVSFGISTD----SEVLTHYNITG-NTICLFRLVDNEQLNLEDED----IE----SIDATK 102 (227)
T ss_dssp SCSTHHHHHHHHTTTCT--TSEEEEECC----HHHHHHTTCCS-SEEEEEETTTTEEEEECHHH----HH----TCCHHH
T ss_pred CCchhHHHHHHHHHhCC--CceEEEECC----HHHHHHcCCCC-CeEEEEEecCcccccccccc----cC----CCCHHH
Confidence 55666788887766665 233321112 34677899998 9999887532 222111100 01 334433
Q ss_pred HHHHhhhcCccccccccCCCcccccc-ccCC-eEEEEEecC-CCchHHHHHHHHHHHHhhCCCCEEEEEEecCCc-hhhh
Q 008311 477 EEALWKEETWRLELLVDGIDPLVLDW-IKEG-KYIFLYGGD-DVEWVRKFTTAARSVANTARIPLEMVYVGKSTK-RDKC 552 (570)
Q Consensus 477 ~e~L~~e~~w~~~ll~d~~d~~i~~~-~~eg-k~I~lYfga-d~~w~r~FT~~l~~vy~~~~~~fEiv~Vs~d~~-~e~~ 552 (570)
...-.++... .++. .+++.-... ...+ +...++|-+ .|+-|+++.+.+++++++.+.++-.+++..++. -.++
T Consensus 103 l~~fi~~~~~--plv~-e~t~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~i~F~~vd~~~~~~~~~ 179 (227)
T 4f9z_D 103 LSRFIEINSL--HMVT-EYNPVTVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQGKILFILVDSGMKENGKV 179 (227)
T ss_dssp HHHHHHHHCC--CSEE-ECCHHHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTTCEEEEEETTSGGGHHH
T ss_pred HHHHHHHhCC--Ccee-ecCcccHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhCCEEEEEeCCccHhHHHH
Confidence 3333333321 1222 133221111 1223 344445533 477888999999999987666666666666542 2234
Q ss_pred hhccccc--ccccccc
Q 008311 553 GESWQPL--QLKSLVT 566 (570)
Q Consensus 553 ~~~~~~~--~~~~~~~ 566 (570)
-++++.- +.|++++
T Consensus 180 l~~fgl~~~~~P~~~i 195 (227)
T 4f9z_D 180 ISFFKLKESQLPALAI 195 (227)
T ss_dssp HHHTTCCGGGCSEEEE
T ss_pred HHHcCCCcccCCEEEE
Confidence 4555554 6677664
Done!