Query 008312
Match_columns 570
No_of_seqs 501 out of 2615
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 23:13:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008312.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008312hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xzw_A Purple acid phosphatase 100.0 3E-71 1E-75 597.5 44.6 399 67-546 6-422 (426)
2 2qfp_A Purple acid phosphatase 100.0 3.1E-69 1E-73 581.4 45.2 397 69-546 2-415 (424)
3 2yeq_A Apased, PHOD, alkaline 100.0 7.3E-38 2.5E-42 345.1 39.8 315 94-428 15-389 (527)
4 3tgh_A Glideosome-associated p 100.0 4.1E-35 1.4E-39 306.2 25.7 253 208-549 3-310 (342)
5 1ute_A Protein (II purple acid 100.0 5.4E-30 1.8E-34 261.4 24.4 257 208-546 6-303 (313)
6 3ib7_A ICC protein; metallopho 99.9 6.6E-22 2.3E-26 203.8 21.6 197 207-450 24-242 (330)
7 3d03_A Phosphohydrolase; glyce 99.9 1.1E-20 3.7E-25 189.3 22.9 193 209-447 1-215 (274)
8 2nxf_A Putative dimetal phosph 99.9 3.5E-21 1.2E-25 196.5 16.9 205 208-447 5-286 (322)
9 2xmo_A LMO2642 protein; phosph 99.8 2.1E-17 7.2E-22 177.9 24.0 194 207-426 38-288 (443)
10 1uf3_A Hypothetical protein TT 99.5 3.8E-13 1.3E-17 130.3 14.4 170 208-421 5-190 (228)
11 2yvt_A Hypothetical protein AQ 99.5 2.8E-13 9.7E-18 134.5 13.8 199 208-421 5-222 (260)
12 2q8u_A Exonuclease, putative; 99.4 1.3E-12 4.6E-17 135.5 12.5 187 208-426 18-235 (336)
13 1z2w_A Vacuolar protein sortin 99.2 2.1E-09 7.1E-14 102.5 20.7 134 208-449 10-147 (192)
14 3rl5_A Metallophosphoesterase 99.2 2.6E-10 8.8E-15 116.0 15.2 194 208-450 59-278 (296)
15 2a22_A Vacuolar protein sortin 99.2 7.1E-10 2.4E-14 107.8 17.1 143 208-449 25-171 (215)
16 3ck2_A Conserved uncharacteriz 99.1 1.9E-09 6.5E-14 101.2 18.5 58 375-449 78-135 (176)
17 1nnw_A Hypothetical protein; s 99.1 8.5E-11 2.9E-15 116.4 9.2 186 209-449 2-197 (252)
18 3av0_A DNA double-strand break 99.1 8.3E-10 2.8E-14 116.8 16.6 174 208-425 20-212 (386)
19 3qfm_A SAPH, putative uncharac 99.1 4.1E-10 1.4E-14 113.5 11.4 185 208-450 11-196 (270)
20 3tho_B Exonuclease, putative; 99.1 8.1E-10 2.8E-14 116.7 13.5 189 209-426 1-217 (379)
21 1s3l_A Hypothetical protein MJ 98.9 7.4E-09 2.5E-13 98.7 11.8 140 209-449 26-167 (190)
22 1xm7_A Hypothetical protein AQ 98.9 5.5E-09 1.9E-13 99.6 9.5 47 375-425 107-153 (195)
23 2kkn_A Uncharacterized protein 98.9 6.8E-08 2.3E-12 91.1 16.5 62 208-303 22-86 (178)
24 3rqz_A Metallophosphoesterase; 98.8 8.3E-09 2.8E-13 102.1 9.2 151 208-423 3-154 (246)
25 1ii7_A MRE11 nuclease; RAD50, 98.8 1.9E-08 6.7E-13 104.0 11.2 73 209-303 1-88 (333)
26 4fbw_A DNA repair protein RAD3 98.8 1.9E-07 6.6E-12 99.2 18.8 41 207-247 12-65 (417)
27 3t1i_A Double-strand break rep 98.7 1.1E-06 3.7E-11 93.8 23.4 41 207-247 31-84 (431)
28 4fbk_A DNA repair and telomere 98.7 1E-06 3.5E-11 94.6 20.2 41 207-247 75-128 (472)
29 2z1a_A 5'-nucleotidase; metal- 98.5 7.6E-07 2.6E-11 98.5 12.7 174 207-425 28-244 (552)
30 1hp1_A 5'-nucleotidase; metall 98.4 7.8E-07 2.7E-11 97.5 10.1 184 207-424 7-232 (516)
31 1su1_A Hypothetical protein YF 98.3 2.5E-06 8.5E-11 82.3 9.6 75 209-303 26-101 (208)
32 3qfk_A Uncharacterized protein 98.3 8.4E-06 2.9E-10 89.6 14.7 186 208-425 19-253 (527)
33 4h2g_A 5'-nucleotidase; dimer, 98.2 2.5E-06 8.7E-11 94.1 9.8 176 207-424 24-245 (546)
34 3ztv_A NAD nucleotidase, NADN; 98.2 1E-05 3.5E-10 89.9 14.3 176 207-424 11-231 (579)
35 2wdc_A SOXB, sulfur oxidation 98.1 1.9E-05 6.3E-10 87.5 14.3 144 235-424 123-291 (562)
36 3ive_A Nucleotidase; structura 98.1 1.7E-05 5.9E-10 86.7 13.5 187 208-423 6-237 (509)
37 3c9f_A 5'-nucleotidase; 2',3'- 98.0 0.00025 8.4E-09 78.3 19.9 194 196-424 3-243 (557)
38 1g5b_A Serine/threonine protei 98.0 3.3E-06 1.1E-10 81.8 4.2 39 208-246 12-52 (221)
39 1t71_A Phosphatase, conserved 97.9 9.8E-05 3.3E-09 74.3 14.1 190 208-449 4-209 (281)
40 2z06_A Putative uncharacterize 97.8 0.00032 1.1E-08 69.4 14.4 188 209-450 1-197 (252)
41 1t70_A Phosphatase; crystal, X 97.7 0.00054 1.9E-08 67.9 14.3 188 209-450 1-200 (255)
42 3gve_A YFKN protein; alpha-bet 97.6 0.00073 2.5E-08 69.9 14.6 40 207-246 10-67 (341)
43 3jyf_A 2',3'-cyclic nucleotide 97.4 0.0023 8E-08 66.1 14.7 40 207-246 7-64 (339)
44 4h1s_A 5'-nucleotidase; hydrol 97.3 0.0046 1.6E-07 67.7 16.5 172 208-424 3-223 (530)
45 2ede_A Netrin receptor DCC; tu 96.8 0.014 4.8E-07 49.0 12.0 97 83-204 9-111 (114)
46 2crz_A Fibronectin type-III do 96.6 0.01 3.5E-07 49.9 9.3 93 84-202 10-105 (110)
47 1x4x_A Fibronectin type-III do 96.5 0.009 3.1E-07 50.1 8.5 37 166-202 62-101 (106)
48 1x4y_A Biregional cell adhesio 96.5 0.023 7.7E-07 48.1 10.8 97 83-204 9-111 (114)
49 1x5l_A Ephrin type-A receptor 96.4 0.016 5.4E-07 48.5 9.2 40 165-204 66-108 (111)
50 1x5f_A Neogenin; RGM binding, 96.3 0.042 1.4E-06 46.5 11.7 94 84-203 19-116 (120)
51 2haz_A N-CAM 1, neural cell ad 96.2 0.018 6.3E-07 48.0 8.7 92 86-200 10-104 (105)
52 2edd_A Netrin receptor DCC; tu 96.2 0.068 2.3E-06 46.2 12.6 94 83-201 19-117 (123)
53 2qjc_A Diadenosine tetraphosph 96.2 0.0026 9E-08 63.2 3.8 38 209-246 19-58 (262)
54 2dfj_A Diadenosinetetraphospha 96.2 0.0033 1.1E-07 63.1 4.5 38 209-246 1-40 (280)
55 2edy_A Receptor-type tyrosine- 96.1 0.0082 2.8E-07 49.5 5.8 88 84-200 10-102 (103)
56 2dm4_A Sortilin-related recept 96.0 0.051 1.7E-06 45.2 10.3 89 85-201 10-102 (108)
57 1x5x_A Fibronectin type-III do 96.0 0.035 1.2E-06 46.4 9.2 37 166-202 65-104 (109)
58 2djs_A Ephrin type-B receptor 95.9 0.023 7.9E-07 47.3 8.0 39 165-203 63-104 (108)
59 2ed8_A Netrin receptor DCC; tu 95.9 0.064 2.2E-06 44.4 10.7 89 85-202 10-101 (106)
60 1x5g_A Neogenin; RGM binding, 95.8 0.046 1.6E-06 45.9 9.6 89 85-202 20-111 (116)
61 2ee3_A Collagen alpha-1(XX) ch 95.8 0.057 1.9E-06 45.8 10.1 90 84-203 9-100 (108)
62 3e0j_A DNA polymerase subunit 95.8 0.037 1.3E-06 59.4 10.6 138 208-367 200-378 (476)
63 1x5j_A Neogenin; RGM binding, 95.8 0.024 8.2E-07 48.3 7.5 96 83-201 9-107 (113)
64 2ee2_A Contactin-1; neural cel 95.7 0.072 2.5E-06 45.1 10.4 39 165-203 74-115 (119)
65 2e7h_A Ephrin type-B receptor 95.6 0.04 1.4E-06 46.1 8.3 39 166-204 65-106 (109)
66 3b83_A Ten-D3; beta sheet, com 95.6 0.12 4.1E-06 42.6 11.0 80 85-193 4-83 (100)
67 3teu_A Fibcon; FN3 domain, fib 95.6 0.056 1.9E-06 44.2 8.8 88 85-201 4-91 (98)
68 1x5z_A Receptor-type tyrosine- 95.5 0.081 2.8E-06 44.2 9.8 38 165-202 70-110 (115)
69 2dbj_A Proto-oncogene tyrosine 95.4 0.16 5.6E-06 43.4 11.6 38 166-203 80-120 (124)
70 2cui_A Tenascin-X; fibronectin 95.4 0.064 2.2E-06 45.9 8.8 90 83-202 9-109 (112)
71 2kbg_A N-CAM 2, neural cell ad 95.4 0.053 1.8E-06 46.7 8.2 83 95-202 19-103 (114)
72 2ed7_A Netrin receptor DCC; tu 95.4 0.17 5.9E-06 42.4 11.5 93 84-202 19-114 (119)
73 2ie4_C PP2A-alpha;, serine/thr 95.3 0.011 3.8E-07 60.1 4.5 38 209-246 50-88 (309)
74 2edx_A Protein tyrosine phosph 95.3 0.14 4.9E-06 43.9 11.0 38 165-202 79-119 (134)
75 2rb8_A Tenascin; beta sheet,lo 95.3 0.11 3.7E-06 43.3 9.9 90 84-203 4-96 (104)
76 2dkm_A Collagen alpha-1(XX) ch 95.2 0.066 2.3E-06 44.6 8.3 38 166-203 62-101 (104)
77 2dju_A Receptor-type tyrosine- 95.2 0.075 2.5E-06 43.6 8.5 88 85-202 10-101 (106)
78 2ed9_A Netrin receptor DCC; tu 95.2 0.081 2.8E-06 44.9 9.0 90 85-200 31-123 (124)
79 2vkw_A Neural cell adhesion mo 95.2 0.12 4.2E-06 48.0 11.0 95 84-201 10-107 (209)
80 1wfo_A Sidekick 2; FN3, cell a 95.1 0.13 4.5E-06 44.1 10.2 93 85-202 30-125 (130)
81 2z72_A Protein-tyrosine-phosph 95.1 0.018 6E-07 59.5 5.1 23 400-423 268-290 (342)
82 1wis_A KIAA1514 protein; FNIII 95.0 0.11 3.8E-06 44.5 9.4 95 84-202 19-120 (124)
83 2crm_A Fibronectin type-III do 95.0 0.031 1.1E-06 47.5 5.8 37 166-202 76-115 (120)
84 1va9_A DOWN syndrome cell adhe 95.0 0.1 3.4E-06 44.0 8.9 96 85-202 18-118 (122)
85 1x5h_A Neogenin; RGM binding, 94.8 0.16 5.4E-06 43.6 9.8 38 164-201 76-116 (132)
86 2dle_A Receptor-type tyrosine- 94.8 0.23 7.9E-06 41.7 10.5 39 165-203 59-99 (104)
87 1k85_A Chitinase A1; fibronect 94.8 0.15 5.3E-06 40.7 9.0 20 166-185 52-71 (88)
88 1fjm_A Protein serine/threonin 94.8 0.02 6.8E-07 58.8 4.4 38 209-246 57-95 (330)
89 2cum_A Tenascin-X; hexabrachio 94.7 0.2 6.7E-06 41.7 9.9 87 84-201 9-97 (105)
90 2db8_A Tripartite motif protei 94.7 0.058 2E-06 45.5 6.6 38 166-203 66-106 (110)
91 2dmk_A Midline 2 isoform 2; mi 94.7 0.11 3.7E-06 45.0 8.5 36 166-201 81-118 (127)
92 3lpw_A A77-A78 domain from tit 94.6 0.23 7.9E-06 45.0 11.0 76 85-186 8-83 (197)
93 2dlh_A Receptor-type tyrosine- 94.6 0.36 1.2E-05 40.4 11.4 38 165-202 76-116 (121)
94 2cuh_A Tenascin-X; fibronectin 94.5 0.17 5.7E-06 42.8 9.1 37 165-201 59-97 (115)
95 1x4z_A Biregional cell adhesio 94.5 0.11 3.6E-06 44.3 7.8 78 84-186 19-97 (121)
96 3tes_A Tencon; fibronectin typ 94.5 0.13 4.4E-06 42.4 8.0 78 85-192 4-82 (98)
97 3p4l_A Neogenin; iron homeosta 94.5 0.46 1.6E-05 44.0 12.9 95 84-201 6-103 (211)
98 2dn7_A Receptor-type tyrosine- 94.5 0.35 1.2E-05 39.7 10.8 87 85-200 10-99 (107)
99 3n1f_C Cell adhesion molecule- 94.5 0.24 8.1E-06 41.1 9.7 89 84-198 6-101 (102)
100 2gee_A Hypothetical protein; f 94.4 0.47 1.6E-05 44.0 12.9 103 85-216 25-127 (203)
101 1x5a_A Ephrin type-A receptor 94.4 0.044 1.5E-06 46.1 5.1 38 167-204 64-104 (107)
102 1uc6_A CNTF receptor, ciliary 94.4 0.32 1.1E-05 40.7 10.6 88 84-198 9-105 (109)
103 2yux_A Myosin-binding protein 94.4 0.22 7.5E-06 42.3 9.6 82 85-192 20-101 (120)
104 2e3v_A Neural cell adhesion mo 94.3 0.14 4.9E-06 43.8 8.1 37 166-202 68-107 (122)
105 1qr4_A Protein (tenascin); fib 94.2 0.17 5.8E-06 46.0 9.0 89 83-201 95-185 (186)
106 1x3d_A Fibronectin type-III do 94.2 0.28 9.5E-06 41.2 9.7 37 166-202 74-113 (118)
107 3h63_A Serine/threonine-protei 94.1 0.052 1.8E-06 55.3 5.7 21 399-419 233-253 (315)
108 3e7a_A PP-1A, serine/threonine 94.0 0.037 1.3E-06 55.9 4.4 21 399-419 228-248 (299)
109 1qr4_A Protein (tenascin); fib 94.0 0.22 7.6E-06 45.2 9.4 88 84-202 8-97 (186)
110 1j8k_A Fibronectin; EDA, TYPEI 94.0 0.31 1.1E-05 39.3 9.3 36 164-199 54-91 (94)
111 1uen_A KIAA0343 protein; immun 93.8 0.13 4.5E-06 43.6 7.1 38 165-202 80-120 (125)
112 3f7q_A Integrin beta-4, GP150; 93.8 0.43 1.5E-05 45.2 11.5 89 83-201 6-97 (234)
113 1x5y_A Myosin binding protein 93.8 0.088 3E-06 44.0 5.7 78 84-186 10-87 (111)
114 3icf_A PPT, serine/threonine-p 93.7 0.074 2.5E-06 54.6 6.0 22 399-420 237-258 (335)
115 3up1_A Interleukin-7 receptor 93.7 0.34 1.2E-05 46.7 10.4 97 82-202 112-216 (223)
116 3ll8_A Serine/threonine-protei 93.7 0.046 1.6E-06 56.5 4.4 37 210-246 71-108 (357)
117 2yuw_A Myosin binding protein 93.7 0.1 3.5E-06 43.5 5.9 22 165-186 65-86 (110)
118 1wao_1 Serine/threonine protei 93.7 0.081 2.8E-06 56.8 6.5 22 400-422 387-408 (477)
119 3n06_B PRL-R, prolactin recept 93.6 0.36 1.2E-05 44.9 10.3 95 82-199 102-203 (210)
120 1cd9_B G-CSF-R, protein (G-CSF 93.6 0.43 1.5E-05 44.4 10.7 93 83-200 109-213 (215)
121 1uem_A KIAA1568 protein; immun 93.6 0.22 7.5E-06 41.7 7.9 37 166-202 73-113 (117)
122 1bqu_A Protein (GP130); cytoki 93.3 0.26 9E-06 45.8 8.8 96 83-201 104-206 (215)
123 1bpv_A Titin, A71, connectin; 93.2 0.21 7.3E-06 42.3 7.3 24 166-189 69-92 (112)
124 1wk0_A KIAA0970 protein; fibro 93.2 0.046 1.6E-06 48.8 3.0 47 165-211 82-131 (137)
125 3mpc_A FN3-like protein; fibro 93.2 0.6 2.1E-05 39.0 9.9 33 168-200 60-95 (103)
126 3k2m_C Monobody HA4; engineere 92.9 0.39 1.3E-05 39.6 8.2 74 85-186 7-81 (101)
127 1aui_A Calcineurin, serine/thr 92.8 0.083 2.9E-06 57.0 4.9 20 400-419 263-282 (521)
128 2ibg_A CG9211-PA, GH03927P; IH 92.7 0.48 1.6E-05 43.9 9.6 35 166-200 175-212 (214)
129 1i1r_A GP130, interleukin-6 re 92.6 0.37 1.3E-05 47.5 9.1 95 83-200 200-301 (303)
130 2b5i_B Interleukin-2 receptor 92.3 0.58 2E-05 44.5 9.7 96 84-202 107-209 (214)
131 1eer_B Epobp, erythropoietin r 92.3 0.52 1.8E-05 44.8 9.4 92 83-198 122-221 (227)
132 2ic2_A CG9211-PA, GH03927P; IH 92.2 0.7 2.4E-05 39.2 9.2 23 164-186 70-92 (115)
133 3r8q_A Fibronectin; heparin, F 92.2 1.1 3.6E-05 43.7 11.8 91 83-202 21-113 (290)
134 3lpw_A A77-A78 domain from tit 92.1 0.48 1.7E-05 42.8 8.6 81 83-190 103-183 (197)
135 1wfu_A Unnamed protein product 92.0 0.13 4.6E-06 44.5 4.4 37 166-202 76-115 (120)
136 1tdq_A Tenascin-R; extracellul 91.9 1.5 5.1E-05 42.3 12.5 92 83-201 105-198 (283)
137 1x5i_A Neogenin; RGM binding, 91.8 2 7E-05 36.6 11.8 89 85-202 30-120 (126)
138 2yrz_A Integrin beta-4; GP150, 91.7 1.1 3.8E-05 37.3 9.9 22 165-186 73-94 (118)
139 3qwq_B Adnectin; cell surface 91.7 0.39 1.3E-05 40.8 6.9 72 84-185 5-77 (114)
140 3p4l_A Neogenin; iron homeosta 91.7 0.65 2.2E-05 43.0 9.1 92 84-200 107-204 (211)
141 2ocf_D Fibronectin; estrogen r 91.5 0.82 2.8E-05 39.2 8.9 74 84-186 30-103 (121)
142 2d9q_B Granulocyte colony-stim 91.5 0.86 2.9E-05 45.2 10.4 94 83-201 203-308 (313)
143 1wf5_A Sidekick 2 protein; FNI 91.4 0.59 2E-05 39.2 7.8 37 165-201 76-116 (121)
144 3l5i_A Interleukin-6 receptor 91.3 0.4 1.4E-05 46.7 7.6 35 166-200 254-290 (290)
145 1uey_A KIAA0343 protein; immun 91.2 1.1 3.9E-05 37.9 9.6 34 169-202 78-115 (127)
146 1fnf_A Fibronectin; RGD, extra 91.2 1.2 4E-05 44.8 11.2 93 84-202 3-95 (368)
147 1oww_A FN, fibronectin first t 91.1 1.2 4.1E-05 36.6 8.7 87 84-198 6-96 (98)
148 3fl7_A Ephrin receptor; ATP-bi 91.1 0.68 2.3E-05 50.5 9.7 37 166-202 496-535 (536)
149 1v5j_A KIAA1355 protein, RSGI 90.9 0.68 2.3E-05 39.1 7.6 93 84-203 9-104 (108)
150 1wj3_A KIAA1496 protein; beta 90.8 1.2 4.1E-05 37.6 9.2 35 166-201 74-111 (117)
151 2qbw_A PDZ-fibronectin fusion 90.7 0.59 2E-05 43.3 7.8 22 165-186 157-178 (195)
152 3qht_C Monobody YSMB-1; fibron 90.5 0.59 2E-05 38.0 6.7 71 85-185 7-78 (97)
153 1tdq_A Tenascin-R; extracellul 90.3 2 6.8E-05 41.4 11.5 101 84-216 16-118 (283)
154 3t1w_A Four-domain fibronectin 90.0 1.3 4.4E-05 44.7 10.3 90 84-200 4-94 (375)
155 3r8q_A Fibronectin; heparin, F 89.8 1.7 5.6E-05 42.3 10.6 100 84-216 114-215 (290)
156 2edb_A Netrin receptor DCC; tu 89.3 1.4 4.8E-05 37.0 8.4 88 85-201 20-109 (116)
157 1cfb_A Drosophila neuroglian; 89.3 1.6 5.4E-05 40.0 9.5 92 84-202 7-103 (205)
158 2ekj_A Collagen alpha-1(XX) ch 89.2 0.15 5.3E-06 42.3 2.1 74 84-186 9-82 (105)
159 1wfn_A Sidekick 2; FN3, cell a 88.7 2.2 7.4E-05 35.6 9.1 22 165-186 74-95 (119)
160 2gee_A Hypothetical protein; f 88.6 1.5 5.1E-05 40.4 8.7 79 85-191 116-194 (203)
161 2w1n_A O-GLCNACASE NAGJ; hexos 88.1 2.6 8.8E-05 40.4 9.8 33 167-199 202-237 (238)
162 2jll_A NCAM2, neural cell adhe 88.0 2 6.7E-05 43.3 9.9 37 165-202 349-388 (389)
163 2q7n_A Leukemia inhibitory fac 87.8 0.91 3.1E-05 48.9 7.5 97 82-201 386-487 (488)
164 3t04_D Monobody 7C12; engineer 87.8 1.4 4.9E-05 36.2 7.2 76 84-185 9-84 (103)
165 1cfb_A Drosophila neuroglian; 87.2 2.9 0.0001 38.1 9.9 91 84-199 106-202 (205)
166 2h41_A Fibronectin; beta sandw 86.0 0.93 3.2E-05 37.4 5.0 28 165-192 59-86 (95)
167 2vkw_A Neural cell adhesion mo 86.0 2.1 7.1E-05 39.3 8.1 22 165-186 165-186 (209)
168 1n26_A IL-6 receptor alpha cha 86.0 3.8 0.00013 40.8 10.6 92 83-198 197-295 (325)
169 2ha1_A Fibronectin; beta sandw 85.8 2.5 8.4E-05 38.6 8.4 88 85-200 2-93 (201)
170 3v6o_A Leptin receptor; recept 85.6 2.5 8.4E-05 39.4 8.4 77 82-184 109-186 (206)
171 1ujt_A KIAA1568 protein; fibro 85.3 0.9 3.1E-05 39.0 4.8 38 165-202 75-115 (120)
172 3csg_A MBP, maltose-binding pr 85.3 1.4 5E-05 46.4 7.4 74 85-186 372-445 (461)
173 3e0g_A Leukemia inhibitory fac 85.2 0.8 2.7E-05 49.3 5.3 97 82-201 381-482 (483)
174 1fnf_A Fibronectin; RGD, extra 84.3 2.9 9.9E-05 41.9 8.9 22 165-186 329-350 (368)
175 1zlg_A Anosmin 1; insulin-like 84.3 4 0.00014 45.5 10.8 34 166-199 224-261 (680)
176 3f7q_A Integrin beta-4, GP150; 83.5 0.9 3.1E-05 42.9 4.4 38 165-202 160-201 (234)
177 3tgx_A Interleukin-21 receptor 83.3 4.1 0.00014 38.4 9.0 102 82-202 100-210 (219)
178 3t1w_A Four-domain fibronectin 83.1 5.1 0.00017 40.2 10.2 86 84-199 279-367 (375)
179 3uto_A Twitchin; kinase, muscl 82.8 3.1 0.00011 45.5 8.9 70 97-192 23-92 (573)
180 3fl7_A Ephrin receptor; ATP-bi 82.8 3.9 0.00013 44.5 9.5 39 164-202 399-443 (536)
181 1axi_B HGHBP, growth hormone r 82.7 1.9 6.5E-05 41.3 6.3 35 165-199 195-234 (236)
182 3mtr_A N-CAM-1, NCAM-1, neural 82.3 1 3.5E-05 41.6 4.1 39 165-203 173-214 (215)
183 2ibg_A CG9211-PA, GH03927P; IH 81.7 3.9 0.00013 37.4 8.0 23 163-185 68-90 (214)
184 2b5i_C Cytokine receptor commo 80.8 5.2 0.00018 36.9 8.5 86 83-198 99-193 (199)
185 2erj_C Cytokine receptor commo 80.7 5.8 0.0002 38.3 9.1 89 83-201 137-234 (247)
186 2ha1_A Fibronectin; beta sandw 79.2 4.2 0.00014 37.0 7.2 28 165-192 165-192 (201)
187 3l5i_A Interleukin-6 receptor 78.0 20 0.00069 34.2 12.2 22 165-186 157-178 (290)
188 2jll_A NCAM2, neural cell adhe 77.3 17 0.00058 36.2 11.8 37 165-201 252-291 (389)
189 3l5h_A Interleukin-6 receptor 77.0 1.4 4.6E-05 47.7 3.5 97 83-202 199-302 (589)
190 2v5y_A Receptor-type tyrosine- 76.5 9 0.00031 42.7 10.3 98 84-201 361-460 (731)
191 1iar_B Protein (interleukin-4 76.2 9.6 0.00033 35.4 8.9 99 82-201 97-201 (207)
192 3bpo_C Interleukin-13 receptor 76.1 7.1 0.00024 38.4 8.4 102 83-199 200-311 (314)
193 1zlg_A Anosmin 1; insulin-like 75.1 14 0.00047 41.0 11.3 39 164-202 593-633 (680)
194 3s98_A Interferon alpha/beta r 74.5 29 0.00098 34.1 12.4 36 166-201 160-200 (306)
195 4go6_B HCF C-terminal chain 1; 73.1 2.8 9.7E-05 39.8 4.3 36 166-201 47-85 (232)
196 2gys_A Cytokine receptor commo 72.8 31 0.0011 35.4 12.7 113 82-216 108-229 (419)
197 3se4_A Interferon alpha/beta r 71.2 30 0.001 35.4 12.1 35 166-200 164-203 (414)
198 3flo_A DNA polymerase alpha su 64.8 12 0.0004 39.9 7.2 92 207-303 146-247 (460)
199 2nzi_A Titin; IG-domain, FNIII 62.4 16 0.00055 34.9 7.4 21 166-186 255-275 (305)
200 4doh_R Interleukin-20 receptor 59.5 10 0.00035 35.8 5.2 38 165-202 173-215 (221)
201 3lqm_A Interleukin-10 receptor 56.8 8.9 0.0003 35.4 4.2 36 166-201 156-196 (201)
202 1bqu_A Protein (GP130); cytoki 52.9 22 0.00076 32.2 6.3 34 165-198 62-98 (215)
203 3lb6_C IL-13, interleukin-13 r 52.5 3.4 0.00012 42.6 0.5 35 167-201 292-336 (380)
204 2v5y_A Receptor-type tyrosine- 51.9 80 0.0027 34.8 11.7 37 165-201 316-357 (731)
205 2dtg_E Insulin receptor; IR ec 50.2 7.5 0.00026 44.9 2.9 38 165-202 549-594 (897)
206 1q38_A Fibronectin; amyloid fi 45.9 6.7 0.00023 31.3 1.1 36 164-199 37-74 (89)
207 2gys_A Cytokine receptor commo 45.5 7.5 0.00026 40.2 1.8 34 165-198 377-418 (419)
208 4go6_B HCF C-terminal chain 1; 43.9 69 0.0023 29.8 8.3 32 169-200 167-201 (232)
209 3b4n_A Endo-pectate lyase; pec 43.1 26 0.0009 35.3 5.2 16 170-185 76-91 (344)
210 3lb6_C IL-13, interleukin-13 r 41.9 2.4E+02 0.0081 28.4 12.6 25 84-108 33-57 (380)
211 3l5h_A Interleukin-6 receptor 37.9 6.2 0.00021 42.4 -0.3 35 165-199 552-588 (589)
212 1i1r_A GP130, interleukin-6 re 36.3 53 0.0018 31.6 6.3 22 165-186 158-180 (303)
213 2dtg_E Insulin receptor; IR ec 34.3 32 0.0011 39.6 4.9 37 165-201 747-789 (897)
214 4doh_B Interleukin-20 receptor 33.0 20 0.00067 33.3 2.4 35 166-200 161-200 (206)
215 2uvf_A Exopolygalacturonase; G 32.1 45 0.0015 36.7 5.4 38 164-201 112-153 (608)
216 1cd9_B G-CSF-R, protein (G-CSF 29.1 1.6E+02 0.0054 26.3 8.0 96 84-198 6-103 (215)
217 2mcm_A Macromomycin; apoprotei 28.3 45 0.0016 28.1 3.5 27 152-181 8-34 (112)
218 1noa_A Neocarzinostatin; antib 27.5 46 0.0016 28.1 3.4 27 152-181 9-35 (113)
219 3se4_A Interferon alpha/beta r 22.8 18 0.00061 37.2 0.0 37 165-201 367-410 (414)
No 1
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=100.00 E-value=3e-71 Score=597.46 Aligned_cols=399 Identities=37% Similarity=0.686 Sum_probs=341.9
Q ss_pred CCCCCCCCCcccCCCCCCCCceEEEeecCCC-CceEEEEEeC-cccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEE
Q 008312 67 AIDLPDTDPRVQRTVEGFEPEQISVSLSSAH-DSVWISWITG-EFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRS 144 (570)
Q Consensus 67 ~~~~p~~~p~~~~~~~~~~P~qi~lt~~~~p-~s~~I~W~T~-~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~ 144 (570)
++|+|..+|++..+....+|+||||++++++ ++|+|+|+|. +. ...++|+||++++.+..++.|+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~------------~~~~~V~y~~~~~~~~~~~~~~~ 73 (426)
T 1xzw_A 6 DVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDK------------AGANKVFYWSENSKSQKRAMGTV 73 (426)
T ss_dssp HHBCCTTCGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSCC------------TTTTEEEEEETTCCCCEEEECEE
T ss_pred cccCCCCCCcccCCCCCCCCceEEEEECCCCCCeEEEEEEeCCCC------------CCCCEEEEecCCCCCceEEEEEE
Confidence 5899999999998888899999999999987 9999999997 42 14579999999988888888887
Q ss_pred EEeeeecccCCccccccCeEEEEEeCCCCCCCEEEEEEecCCCCCccceeEEEcCCCCCCCCCCeEEEEEecCCCCCChH
Q 008312 145 LVYSQLYPFLGLQNYTSGIIHHVRLTGLKPDTLYHYQCGDPSIPAMSGTYCFRTMPDSSSTSYPSRIAIVGDVGLTYNTT 224 (570)
Q Consensus 145 ~~y~~~~p~~g~~~~~~~~~h~v~ltgL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p~~~~~~~~~rf~vigD~g~~~~~~ 224 (570)
.+|+.. ++.++++|+|+|+||+|+|+|+|||+.+ .+|++++|+|+|.++.. .++||+++||+|......
T Consensus 74 ~~~~~~-------~~~~~~~~~v~l~gL~p~t~Y~Yrv~~g---~~s~~~~f~T~p~~~~~-~~~~f~~~gD~~~~~~~~ 142 (426)
T 1xzw_A 74 VTYKYY-------NYTSAFIHHCTIKDLEYDTKYYYRLGFG---DAKRQFWFVTPPKPGPD-VPYVFGLIGDIGQTHDSN 142 (426)
T ss_dssp ECCEET-------TEECCEEEEEEECCCCTTCEEEEEECCG---GGCEEEEEECCCCCCTT-CCEEEEEECSCTTBHHHH
T ss_pred EEEEec-------CCcCCEEEEEEECCCCCCCEEEEEECCC---CccceeEEECCCCCCCC-CCeEEEEEEeCCCCCchH
Confidence 776532 2457899999999999999999999873 58999999999987654 489999999999875556
Q ss_pred HHHHHHHhC--CCCEEEEcCCcccccccccCCCCCCcccccCCCCCcccchHHHHHHHHHhhhhhhccCCeEEeccCccc
Q 008312 225 STVSHMISN--RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEY 302 (570)
Q Consensus 225 ~~i~~l~~~--~pDfvl~~GDl~Y~d~~~~~G~~~~c~~~~~~~~~~~e~Y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~ 302 (570)
.+++++.+. +|||||++||++|+++... ..+.+|+.|.+.++++.+.+|+|+++||||+
T Consensus 143 ~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~-------------------~~~~~~~~~~~~l~~l~~~~P~~~v~GNHD~ 203 (426)
T 1xzw_A 143 TTLTHYEQNSAKGQAVLFMGDLSYSNRWPN-------------------HDNNRWDTWGRFSERSVAYQPWIWTAGNHEI 203 (426)
T ss_dssp HHHHHHHHCTTCCSEEEECSCCCCGGGSGG-------------------GCTHHHHHHHHHHHHHHTTSCEECCCCGGGC
T ss_pred HHHHHHHhCCCCCCEEEeCCChhhcccCCc-------------------ccchHHHHHHHHHHHHHhcCCEEEecccccc
Confidence 778888876 8999999999999754310 0135799999999999889999999999999
Q ss_pred cccc---cchhhhhhhcccCCCCCCCCCCCcceEEEEeCeEEEEEeecCcCCCCCHHHHHHHHHHHhccccCCCCEEEEE
Q 008312 303 EEQA---ENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFDKSGDQYKWLEEDLANVEREVTPWLVAT 379 (570)
Q Consensus 303 ~~~~---~~~~~~~y~~~f~~P~~~~~~~~~~yYSf~~G~v~fI~Ldt~~~~~~~~~Q~~WLe~~L~~~~r~~~pwiIV~ 379 (570)
.... ....|..|..+|.||.++.+...+.||+|++|+++||+||++.++..+.+|++||+++|+++++++++|+||+
T Consensus 204 ~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~ 283 (426)
T 1xzw_A 204 DYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVL 283 (426)
T ss_dssp CCBGGGTBCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEE
T ss_pred ccCCccccccCChhheEEEeCCcccCCCCCCCeEEEEECCEEEEEeeCcccCCCCHHHHHHHHHHHHhhhhcCCCEEEEE
Confidence 7542 1246788999999998765566789999999999999999998777889999999999999887788999999
Q ss_pred eCCCccccCCCcccchHHHHHHHHHHHHHcCCeEEEEcccccceeeeeccccCc-----------cCCCCcEEEEECCCC
Q 008312 380 WHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHQVHAYERSNRVYNYT-----------LDPCGPVHITVGDGG 448 (570)
Q Consensus 380 ~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~~H~YeR~~pv~n~~-----------~~~~g~vyiv~G~gG 448 (570)
+|+|+|++...+..+.+.+|+.|+++|.+++||++|+|| +|.|||+.|+++.+ .+++|++||++|+||
T Consensus 284 ~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH-~H~~~r~~p~~~~~~~~~~g~~~~~~~~~g~~yi~~G~gG 362 (426)
T 1xzw_A 284 VHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGH-VHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGG 362 (426)
T ss_dssp CSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECS-SSSEEEECSEECCCCCSTTCCCCCEECTTSCEEEEECCSC
T ss_pred eccCceeCCCcccCCCHHHHHHHHHHHHHhCCCEEEEcC-hhhheeeeeecCccccccCCccccccCCCccEEEEeCCCc
Confidence 999999876555556677899999999999999999999 99999999998765 347899999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCCeecCCCcccccccccCCCCCCCCCCCCCCccceeeCCccEEEEEEecCCcEEEEEE
Q 008312 449 NREKMAVPHADEPGNCPEPSTTPDKILGGGKFCGFNFTSGPASGKFCWDRQPDYSAFRESSFGHGILEVKNETHALWTWH 528 (570)
Q Consensus 449 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~p~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~l~~~~~ 528 (570)
+.+++... |. ..+|+|++|++.+|||++|+|.|+|||+|+|+
T Consensus 363 ~~~~~~~~----------------------------~~----------~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~ 404 (426)
T 1xzw_A 363 NSEGLASE----------------------------MT----------QPQPSYSAFREASFGHGIFDIKNRTHAHFSWH 404 (426)
T ss_dssp CTTCCCCC----------------------------BC----------SSCCTTEEEEECCCEEEEEEECSSSEEEEEEE
T ss_pred cccccccc----------------------------cC----------CCCCCceeEEecCCCeEEEEEEcCCeEEEEEE
Confidence 98754210 10 35789999999999999999999999999999
Q ss_pred EecCCceeeeEEEEEEeC
Q 008312 529 RNQDFYEAAGDQIYIVRQ 546 (570)
Q Consensus 529 ~~~d~~~~v~D~~~i~k~ 546 (570)
+++|+...|.|+|||+|+
T Consensus 405 ~~~dg~~~~~D~~~i~~~ 422 (426)
T 1xzw_A 405 RNQDGASVEADSLWLLNR 422 (426)
T ss_dssp ETTSCTTCCSEEEEEECS
T ss_pred ECCCCCEEEeEEEEEEec
Confidence 999986669999999997
No 2
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=100.00 E-value=3.1e-69 Score=581.37 Aligned_cols=397 Identities=37% Similarity=0.685 Sum_probs=333.2
Q ss_pred CCCCCCCcccCCCCCCCCceEEEeecCCC-CceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEe
Q 008312 69 DLPDTDPRVQRTVEGFEPEQISVSLSSAH-DSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVY 147 (570)
Q Consensus 69 ~~p~~~p~~~~~~~~~~P~qi~lt~~~~p-~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y 147 (570)
|+|..++++..+.....|+||||++++++ ++|+|+|+|.+. ...++|+||++++.+..++.|+..+|
T Consensus 2 ~~~~~~~~~~~~~~~~~P~~v~l~~~~~~~~~~~v~W~t~~~------------~~~~~V~~~~~~~~~~~~~~g~~~~~ 69 (424)
T 2qfp_A 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDE------------PGSSAVRYWSEKNGRKRIAKGKMSTY 69 (424)
T ss_dssp BCCTTSGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSS------------CCCCCEEEEESSSCCCEEECCEEECC
T ss_pred CCCCCCCcccCCCCCCCCceEEEEecCCCCCeEEEEEECCCC------------CCCCEEEEEeCCCCCceEEEEEEEEE
Confidence 78999999888877779999999999876 899999999653 13578999999998888888887777
Q ss_pred eeecccCCccccccCeEEEEEeCCCCCCCEEEEEEecCCCCCccceeEEEcCCCCCCCCCCeEEEEEecCCCCCChHHHH
Q 008312 148 SQLYPFLGLQNYTSGIIHHVRLTGLKPDTLYHYQCGDPSIPAMSGTYCFRTMPDSSSTSYPSRIAIVGDVGLTYNTTSTV 227 (570)
Q Consensus 148 ~~~~p~~g~~~~~~~~~h~v~ltgL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p~~~~~~~~~rf~vigD~g~~~~~~~~i 227 (570)
+.. ++.++++|+|+|+||+|+|+|+|||+.+ .+|++++|+|+|.+++. .++||+++||+|.......++
T Consensus 70 ~~~-------~~~~~~~~~v~l~gL~p~t~Y~Yrv~~~---~~s~~~~f~T~p~~~~~-~~~~f~~igD~~~~~~~~~~l 138 (424)
T 2qfp_A 70 RFF-------NYSSGFIHHTTIRKLKYNTKYYYEVGLR---NTTRRFSFITPPQTGLD-VPYTFGLIGDLGQSFDSNTTL 138 (424)
T ss_dssp BCS-------SCBCCEEEEEEECSCCTTCEEEEEECCS---SSCEEEEEECCCCCCTT-CCEEEEEECSCTTBHHHHHHH
T ss_pred Eec-------CCCCCEEEEEEECCCCCCCEEEEEECCC---CccceEEEECCCCCCCC-CCeEEEEEEeCCCCCChHHHH
Confidence 531 2467899999999999999999999976 58999999999987654 489999999999875555678
Q ss_pred HHHHhC--CCCEEEEcCCcccccccccCCCCCCcccccCCCCCcccchHHHHHHHHHhhhhhhccCCeEEeccCcccccc
Q 008312 228 SHMISN--RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQ 305 (570)
Q Consensus 228 ~~l~~~--~pDfvl~~GDl~Y~d~~~~~G~~~~c~~~~~~~~~~~e~Y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~ 305 (570)
+++.+. +|||||++||++|++++.. ..+.+|+.|.++++++.+.+|+|+++||||+...
T Consensus 139 ~~~~~~~~~~D~vl~~GDl~y~~~~~~-------------------~~~~~~~~~~~~l~~~~~~~P~~~v~GNHD~~~~ 199 (424)
T 2qfp_A 139 SHYELSPKKGQTVLFVGDLSYADRYPN-------------------HDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFA 199 (424)
T ss_dssp HHHHTCSSCCCEEEECSCCSCGGGSGG-------------------GCTHHHHHHHHHHHHHHTTSCEEECCCHHHHCCB
T ss_pred HHHHhCCCCCCEEEEcCcccccccccc-------------------ccchHHHHHHHHHHHHHhcCCeEeecCCcccccC
Confidence 888775 8999999999999754310 0135799999999999888999999999999753
Q ss_pred c---cchhhhhhhcccCCCCCCCCCCCcceEEEEeCeEEEEEeecCcCCCCCHHHHHHHHHHHhccccCCCCEEEEEeCC
Q 008312 306 A---ENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFDKSGDQYKWLEEDLANVEREVTPWLVATWHA 382 (570)
Q Consensus 306 ~---~~~~~~~y~~~f~~P~~~~~~~~~~yYSf~~G~v~fI~Ldt~~~~~~~~~Q~~WLe~~L~~~~r~~~pwiIV~~H~ 382 (570)
. ....|..|..+|.||........+.||+|++|+++||+||++..+....+|++||+++|+++++++++|+||++|+
T Consensus 200 ~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~ 279 (424)
T 2qfp_A 200 PEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHS 279 (424)
T ss_dssp GGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSS
T ss_pred CcccccccchhhhhhccCCccccCCCCCcEEEEEECCEEEEEecCCccCCCcHHHHHHHHHHHhhhcccCCCEEEEEeCc
Confidence 2 1235778899999997655556789999999999999999987776678999999999999887778999999999
Q ss_pred CccccCCCcccchHHHHHHHHHHHHHcCCeEEEEcccccceeeeeccccCc-----------cCCCCcEEEEECCCCccC
Q 008312 383 PWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHQVHAYERSNRVYNYT-----------LDPCGPVHITVGDGGNRE 451 (570)
Q Consensus 383 P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~~H~YeR~~pv~n~~-----------~~~~g~vyiv~G~gG~~e 451 (570)
|+|++...++.+.+.+|+.|+++|.+++||++|+|| +|.|+|++|+++.+ .+++|++||++|+||+.+
T Consensus 280 P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH-~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~vyi~~G~gg~~~ 358 (424)
T 2qfp_A 280 PLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGH-VHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYG 358 (424)
T ss_dssp CSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECS-SSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEECCSCTTS
T ss_pred CceecCcccccccHHHHHHHHHHHHHhCCcEEEECC-hhhhheeccccCcceeccCCccccccCCCCcEEEEecCCCCcc
Confidence 999876555555667899999999999999999999 99999999986532 256899999999999987
Q ss_pred CCCCCCCCCCCCCCCCCCCCCeecCCCcccccccccCCCCCCCCCCCCCCccceeeCCccEEEEEEecCCcEEEEEEEec
Q 008312 452 KMAVPHADEPGNCPEPSTTPDKILGGGKFCGFNFTSGPASGKFCWDRQPDYSAFRESSFGHGILEVKNETHALWTWHRNQ 531 (570)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~p~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~l~~~~~~~~ 531 (570)
+... +|+ .++|+|++||+.+|||++|+|.|+|+|+|+|++++
T Consensus 359 ~~~~----------------------------~~~----------~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~ 400 (424)
T 2qfp_A 359 VIDS----------------------------NMI----------QPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQ 400 (424)
T ss_dssp CCCC----------------------------CBC----------SSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETT
T ss_pred ccCc----------------------------cCC----------CCCCCcceEEecCCCEEEEEEEcCcEEEEEEEECC
Confidence 6421 011 35789999999999999999999999999999999
Q ss_pred CCceeeeEEEEEEeC
Q 008312 532 DFYEAAGDQIYIVRQ 546 (570)
Q Consensus 532 d~~~~v~D~~~i~k~ 546 (570)
|+...+.|+|||+|+
T Consensus 401 ~g~~~~~D~~~i~~~ 415 (424)
T 2qfp_A 401 DGVAVEADSVWFFNR 415 (424)
T ss_dssp SCTTCCSEEEEEECT
T ss_pred CCCEEeeeEEEEEec
Confidence 984334799999998
No 3
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=100.00 E-value=7.3e-38 Score=345.09 Aligned_cols=315 Identities=18% Similarity=0.228 Sum_probs=218.0
Q ss_pred cCCC-CceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCc--eEEEeEEEEeeeecccCCccccccCeEEEEEeC
Q 008312 94 SSAH-DSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLN--RKATGRSLVYSQLYPFLGLQNYTSGIIHHVRLT 170 (570)
Q Consensus 94 ~~~p-~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~--~~a~g~~~~y~~~~p~~g~~~~~~~~~h~v~lt 170 (570)
+||| ...+|.|++..+..-.. ..+ ...+..|+|..+.+... ....|...+. ...+++|+|+|+
T Consensus 15 sGDp~~~~vilWtr~~p~~~~~-~~~--~~~~~~v~~eva~d~~f~~~v~~g~~~a~-----------~~~~~t~~v~v~ 80 (527)
T 2yeq_A 15 SGDPLSDSVVLWTRLAPDPLNG-GGM--PKQAVPVKWEVAKDEHFRKIVRKGTEMAK-----------PSLAHSVHVEAD 80 (527)
T ss_dssp EECCCSSCEEEEEECCSBGGGT-BCC--CSSCEEEEEEEESSTTSSSEEEEEEEEEC-----------GGGTTEEEEEEC
T ss_pred ccCCCCCeEEEEEecCCcccCC-CCC--CCCceEEEEEEecCCccccceEeeeEEec-----------CCCceEEEeecC
Confidence 3566 34558899976420000 001 11346777777666543 3344443322 135799999999
Q ss_pred CCCCCCEEEEEEecCCCCCccceeEEEcCCCCCCCCCCeEEEEEecCCCCCChHHHHHHHHhCCCCEEEEcCCccccccc
Q 008312 171 GLKPDTLYHYQCGDPSIPAMSGTYCFRTMPDSSSTSYPSRIAIVGDVGLTYNTTSTVSHMISNRPDLILLVGDVTYANLY 250 (570)
Q Consensus 171 gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p~~~~~~~~~rf~vigD~g~~~~~~~~i~~l~~~~pDfvl~~GDl~Y~d~~ 250 (570)
||+|+|+|+|||+.++ .+|++++|+|+|.++....++||+++||.+.......++.+|.+.+||||||+||++|+++.
T Consensus 81 gL~P~t~Y~Yr~~~~~--~~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~g~~~~~~~ia~~~~D~vlhlGD~iY~d~~ 158 (527)
T 2yeq_A 81 GLEPNKVYYYRFKTGH--ELSPVGKTKTLPAPGANVPQMTFAFASCQQYEHGYYTAYKHMAKEKLDLVFHLGDYIYEYGP 158 (527)
T ss_dssp SCCTTCEEEEEEEETT--EECCCEEEECCCCTTCCCCCEEEEEECCCCGGGCCCHHHHHHTTSCCSEEEECSCSSCCCCT
T ss_pred CcCCCCEEEEEEEeCC--CcCCCceEEcCCCCCCCCCCeEEEEEecCCCCCCccHHHHHHHhcCCCEEEecCCcccCCCC
Confidence 9999999999999865 78999999999988665458999999999875444567888888899999999999999754
Q ss_pred ccCCCCCCcccccCC-CCCcccchHHHHHHHH--HhhhhhhccCCeEEeccCccccccccch---------hh-----hh
Q 008312 251 LTNGTGSDCYACSFA-NSPIHETYQPRWDYWG--RYMQPVLSKVPIMVVEGNHEYEEQAENR---------TF-----VA 313 (570)
Q Consensus 251 ~~~G~~~~c~~~~~~-~~~~~e~Y~~~wd~~~--~~l~~l~~~iP~~~v~GNHD~~~~~~~~---------~~-----~~ 313 (570)
...+.....-+.... .....+.|+.+|..+. ..++.+.+.+|+|+++||||+.++.... .| .+
T Consensus 159 ~~~~~~~~~~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A 238 (527)
T 2yeq_A 159 NEYVSKTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAA 238 (527)
T ss_dssp TSSCCTTCCCSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHH
T ss_pred CcccccccccccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccccCCCCCCcccccCCcccHHHHHHHH
Confidence 211100000010000 1112245666666554 2367788899999999999998764321 01 24
Q ss_pred hhccc-CCCCCC----CCCCCcceEEEEeCe-EEEEEeecCcCCC----------------------CCHHHHHHHHHHH
Q 008312 314 YTSRF-AFPSKE----SGSLSKFYYSFNAGG-IHFLMLAAYVSFD----------------------KSGDQYKWLEEDL 365 (570)
Q Consensus 314 y~~~f-~~P~~~----~~~~~~~yYSf~~G~-v~fI~Ldt~~~~~----------------------~~~~Q~~WLe~~L 365 (570)
++.+| .||... .+.....||+|++|+ ++||+||++.... .+.+|++||+++|
T Consensus 239 ~~ay~e~~P~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L 318 (527)
T 2yeq_A 239 YQAYYEHMPLRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNL 318 (527)
T ss_dssp HHHHHHHSCCCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHH
T ss_pred HHHHHHhCCCCcccCCCCCCceEEEEEEcCCcceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHH
Confidence 44444 455432 123457899999999 9999999964211 3689999999999
Q ss_pred hccccCCCCEEEEEeCCCccccCC----------CcccchHHHHHHHHHHHHHcCC--eEEEEcccccceeeeec
Q 008312 366 ANVEREVTPWLVATWHAPWYSTYK----------AHYREAECMRVAMEDLLYKYGV--DVVFNGHQVHAYERSNR 428 (570)
Q Consensus 366 ~~~~r~~~pwiIV~~H~P~y~s~~----------~~~~~~~~~r~~l~~ll~~y~V--dlvlsGH~~H~YeR~~p 428 (570)
++ ++++|+||+.|+|++.... ..+......|+.|+++|.+++| +++|+|| +|.+++...
T Consensus 319 ~~---s~a~W~Iv~s~~p~~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGD-vH~~~~~~~ 389 (527)
T 2yeq_A 319 GS---STAHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGD-VHASWASNL 389 (527)
T ss_dssp HH---CCSSEEEEECSSCCSCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECS-SSSEEEEEE
T ss_pred hc---CCCCeEEEEeCCcccccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcc-hHHHhHhhc
Confidence 98 4689999999999987532 1222234569999999999998 4999999 999999863
No 4
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=4.1e-35 Score=306.19 Aligned_cols=253 Identities=17% Similarity=0.216 Sum_probs=185.7
Q ss_pred CeEEEEEecCCCCCChHHHH-HH----HHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCcccchHHHHHH-HH
Q 008312 208 PSRIAIVGDVGLTYNTTSTV-SH----MISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDY-WG 281 (570)
Q Consensus 208 ~~rf~vigD~g~~~~~~~~i-~~----l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~c~~~~~~~~~~~e~Y~~~wd~-~~ 281 (570)
++||+++||+|.+...+..+ +. +.+.+|||||++||++|. +. .+. .+++|.. |.
T Consensus 3 ~l~f~~igD~g~g~~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~-G~--~~~-----------------~d~~~~~~f~ 62 (342)
T 3tgh_A 3 QLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFID-GV--KGL-----------------NDPAWKNLYE 62 (342)
T ss_dssp CEEEEECCSCBSCCHHHHHHHHHHHHHHHHTTCCEEEECSCSBTT-CC--CST-----------------TCTHHHHHTT
T ss_pred eEEEEEEecCCCCCchHHHHHHHHHHHHhhcCCCEEEECCCcccC-CC--CcC-----------------ccHHHHHHHH
Confidence 69999999999865443322 22 234699999999999985 22 000 1234543 33
Q ss_pred Hhhhhh--hccCCeEEeccCccccccccc-hhhh-------------------hhhcccCCCCCCCCCCCcceEEE----
Q 008312 282 RYMQPV--LSKVPIMVVEGNHEYEEQAEN-RTFV-------------------AYTSRFAFPSKESGSLSKFYYSF---- 335 (570)
Q Consensus 282 ~~l~~l--~~~iP~~~v~GNHD~~~~~~~-~~~~-------------------~y~~~f~~P~~~~~~~~~~yYSf---- 335 (570)
+.++.+ ...+||++|+||||+..+... ..+. ....||.||. .||+|
T Consensus 63 ~~~~~~~~~~~~P~~~vlGNHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~--------~yY~~~~~f 134 (342)
T 3tgh_A 63 DVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPN--------YWYHYFTHF 134 (342)
T ss_dssp TTSCCGGGTTCSEEEECCCHHHHTSCHHHHHHHHHC---------------CCCSSCEEECSS--------SSEEEEEEE
T ss_pred HHhhhhhhhhCCCEEEeCCCCccCCCchHhhhhhhcccccccccccccccccccCCCCccCCc--------ceEEEEEEe
Confidence 333333 457999999999999865321 1111 1345667775 57765
Q ss_pred Ee---------C----eEEEEEeecCcCC---C-------CCHHHHHHHHHHHhccccCCCCEEEEEeCCCccccCCCcc
Q 008312 336 NA---------G----GIHFLMLAAYVSF---D-------KSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHY 392 (570)
Q Consensus 336 ~~---------G----~v~fI~Ldt~~~~---~-------~~~~Q~~WLe~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~ 392 (570)
.. | .++||+|||.... . ...+|++||+++|++ ++|+||++|+|+|++.. +
T Consensus 135 ~~~~~~~~~~~g~~~~~v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~~~~~~-~- 207 (342)
T 3tgh_A 135 TVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPIYSSGY-S- 207 (342)
T ss_dssp EEC---------CEEEEEEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCSSCSST-T-
T ss_pred eccccccccccCCCCceEEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCCCCCCC-C-
Confidence 32 3 4999999996321 1 135899999999943 57999999999998753 2
Q ss_pred cchHHHHHHHHHHHHHcCCeEEEEcccccceeeeeccccCccCCCCcEEEEECCCCccCCCCCCCCCCCCCCCCCCCCCC
Q 008312 393 REAECMRVAMEDLLYKYGVDVVFNGHQVHAYERSNRVYNYTLDPCGPVHITVGDGGNREKMAVPHADEPGNCPEPSTTPD 472 (570)
Q Consensus 393 ~~~~~~r~~l~~ll~~y~VdlvlsGH~~H~YeR~~pv~n~~~~~~g~vyiv~G~gG~~e~~~~~~~~~~~~~~~~~~~~~ 472 (570)
.....+++.|++||++|+||++|+|| +|.|+|..+ .|++||++|+||......
T Consensus 208 ~~~~~l~~~l~~ll~~~~VdlvlsGH-~H~~~~~~~--------~g~~~iv~Ga~g~~~~~~------------------ 260 (342)
T 3tgh_A 208 RGSSYLAYYLLPLLKDAEVDLYISGH-DNNMEVIED--------NDMAHITCGSGSMSQGKS------------------ 260 (342)
T ss_dssp CCCHHHHHHTHHHHHHTTCCEEEECS-SSSEEEEEE--------TTEEEEEECCSSCCCCCC------------------
T ss_pred CCcHHHHHHHHHHHHHcCCCEEEECC-CcceeEEee--------CCcEEEEeCccccccccC------------------
Confidence 33457799999999999999999999 999999974 579999999998754210
Q ss_pred eecCCCcccccccccCCCCCCCCCCCCCCccceeeCCccEEEEEEecCCcEEEEEEEecCCceeeeEEEEEEeCCCC
Q 008312 473 KILGGGKFCGFNFTSGPASGKFCWDRQPDYSAFRESSFGHGILEVKNETHALWTWHRNQDFYEAAGDQIYIVRQPDL 549 (570)
Q Consensus 473 ~~~~~~~~~~~~~t~~p~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~l~~~~~~~~d~~~~v~D~~~i~k~~~~ 549 (570)
...++|++|+...+||++|++ +++.+.++|+.+.+| +++|+++|.|+...
T Consensus 261 ------------------------~~~~~~s~f~~~~~Gf~~l~v-~~~~l~~~~~~~~~G--~vld~~~i~k~~~~ 310 (342)
T 3tgh_A 261 ------------------------GMKNSKSLFFSSDIGFCVHEL-SNNGIVTKFVSSKKG--EVIYTHKLNIKKKK 310 (342)
T ss_dssp ------------------------SSCCTTEEEEECSSEEEEEEE-ETTEEEEEEEETTTT--EEEEEEEEECCCCS
T ss_pred ------------------------CCCCCcceeecCCCcEEEEEE-ECCEEEEEEEECCCC--cEEEEEEEECCCCc
Confidence 113568999999999999999 778999999976676 99999999998664
No 5
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=99.97 E-value=5.4e-30 Score=261.38 Aligned_cols=257 Identities=20% Similarity=0.265 Sum_probs=174.5
Q ss_pred CeEEEEEecCCCCCC-------h---HHHHHH-HHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCcccchHHH
Q 008312 208 PSRIAIVGDVGLTYN-------T---TSTVSH-MISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPR 276 (570)
Q Consensus 208 ~~rf~vigD~g~~~~-------~---~~~i~~-l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~c~~~~~~~~~~~e~Y~~~ 276 (570)
++||+++||+|.... . ...+.+ +.+.+|||||++||++|.++....+ ..+
T Consensus 6 ~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~-------------------~~~ 66 (313)
T 1ute_A 6 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAK-------------------DKR 66 (313)
T ss_dssp CEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTT-------------------CTH
T ss_pred ceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcc-------------------hHH
Confidence 699999999998742 1 122333 2345899999999999874321000 112
Q ss_pred HHHH-HHhhhhhhc-cCCeEEeccCccccccccc-hhhhhhhcccCCCCCCCCCCCcceEEEEe------CeEEEEEeec
Q 008312 277 WDYW-GRYMQPVLS-KVPIMVVEGNHEYEEQAEN-RTFVAYTSRFAFPSKESGSLSKFYYSFNA------GGIHFLMLAA 347 (570)
Q Consensus 277 wd~~-~~~l~~l~~-~iP~~~v~GNHD~~~~~~~-~~~~~y~~~f~~P~~~~~~~~~~yYSf~~------G~v~fI~Ldt 347 (570)
|... .+.++.... .+|+++++||||+..+... ..|.....+|.+| ..||+|.+ ++++||+||+
T Consensus 67 ~~~~~~~~~~~~~l~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~lds 138 (313)
T 1ute_A 67 FQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFMLDT 138 (313)
T ss_dssp HHHHTTTTSCSGGGTTCCEEECCCHHHHHSCHHHHHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEECCH
T ss_pred HHHHHHHHcCchhhcCCCEEEECCCCccCCCccccccccccCCCccCc--------ccceEEEEecCCCCceEEEEEEEC
Confidence 2222 222221123 7999999999999643211 1122223344444 35899888 5999999998
Q ss_pred CcCC-----------------CCCHHHHHHHHHHHhccccCCCCEEEEEeCCCccccCCCcccchHHHHHHHHHHHHHcC
Q 008312 348 YVSF-----------------DKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYG 410 (570)
Q Consensus 348 ~~~~-----------------~~~~~Q~~WLe~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~ 410 (570)
.... ..+.+|++||+++|++.. .+|+|+++|+|++.... + ....++++.|.++|.+++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~wL~~~L~~~~---~~~~iv~~H~p~~~~~~-~-~~~~~~~~~l~~~l~~~~ 213 (313)
T 1ute_A 139 VTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAAK---EDYVLVAGHYPVWSIAE-H-GPTHCLVKQLLPLLTTHK 213 (313)
T ss_dssp HHHHCCGGGSTTCSCCSCSCHHHHHHHHHHHHHHHHHCC---CSEEEEECSSCSSCCSS-S-CCCHHHHHHTHHHHHHTT
T ss_pred hHHhCcCccccccccCCccccchHHHHHHHHHHHHHhCC---CCeEEEEECCCCccCCC-C-CCcHHHHHHHHHHHHHcC
Confidence 6410 124799999999999853 47999999999997643 2 223466889999999999
Q ss_pred CeEEEEcccccceeeeeccccCccCCCCcEEEEECCCCccCCCCCCCCCCCCCCCCCCCCCCeecCCCcccccccccCCC
Q 008312 411 VDVVFNGHQVHAYERSNRVYNYTLDPCGPVHITVGDGGNREKMAVPHADEPGNCPEPSTTPDKILGGGKFCGFNFTSGPA 490 (570)
Q Consensus 411 VdlvlsGH~~H~YeR~~pv~n~~~~~~g~vyiv~G~gG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~p~ 490 (570)
|+++|+|| +|.+++..+ .+|+.||++|++|....... +.+
T Consensus 214 v~~~l~GH-~H~~~~~~~-------~~g~~~i~~gs~~~~~~~~~-~~~------------------------------- 253 (313)
T 1ute_A 214 VTAYLCGH-DHNLQYLQD-------ENGLGFVLSGAGNFMDPSKK-HLR------------------------------- 253 (313)
T ss_dssp CSEEEECS-SSSEEEEEC-------TTCCEEEEECBSSCCCCCCT-TGG-------------------------------
T ss_pred CcEEEECC-hhhhhhccC-------CCCceEEEECCCcCcCcccc-ccc-------------------------------
Confidence 99999999 999999863 46899999999986432110 000
Q ss_pred CCCCCCCCCCCccceee----CCccEEEEEEecCCcEEEEEEEecCCceeeeEEEEEEeC
Q 008312 491 SGKFCWDRQPDYSAFRE----SSFGHGILEVKNETHALWTWHRNQDFYEAAGDQIYIVRQ 546 (570)
Q Consensus 491 ~~~~~~~~~p~~s~~~~----~~~G~~~l~v~n~t~l~~~~~~~~d~~~~v~D~~~i~k~ 546 (570)
...+.+..|.. ..+||++|+| +++.+.++|+.. ++ +++|+++|.|.
T Consensus 254 ------~~~~~~~~~~~~~~~~~~gy~~l~v-~~~~~~~~~~~~-~g--~~~~~~~l~~~ 303 (313)
T 1ute_A 254 ------KVPNGYLRFHFGAENSLGGFAYVEI-TPKEMSVTYIEA-SG--KSLFKTKLPRR 303 (313)
T ss_dssp ------GSCTTCEEEEECCTTSCCEEEEEEE-CSSCEEEEEEET-TS--CEEEEEEECCC
T ss_pred ------cCCCcccceeccCcCCCCceEEEEE-EcCEEEEEEEcC-CC--cEEEEEEeccc
Confidence 00012333433 3489999999 677899999976 55 89999999876
No 6
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=99.89 E-value=6.6e-22 Score=203.76 Aligned_cols=197 Identities=17% Similarity=0.199 Sum_probs=135.7
Q ss_pred CCeEEEEEecCCCCCC---------h----HHHHHHHHh--CCCCEEEEcCCcccccccccCCCCCCcccccCCCCCccc
Q 008312 207 YPSRIAIVGDVGLTYN---------T----TSTVSHMIS--NRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHE 271 (570)
Q Consensus 207 ~~~rf~vigD~g~~~~---------~----~~~i~~l~~--~~pDfvl~~GDl~Y~d~~~~~G~~~~c~~~~~~~~~~~e 271 (570)
.++||++++|+|.... . ..+++.+.+ .++|+||++||+++. |.
T Consensus 24 ~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~------~~---------------- 81 (330)
T 3ib7_A 24 PDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADK------GE---------------- 81 (330)
T ss_dssp CSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTT------CC----------------
T ss_pred CCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCC------CC----------------
Confidence 3799999999997421 1 234555555 689999999999953 22
Q ss_pred chHHHHHHHHHhhhhhh--ccCCeEEeccCccccccccchhhhhhhcccCCCCCCCCCCCcceEEEEeCeEEEEEeecCc
Q 008312 272 TYQPRWDYWGRYMQPVL--SKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYV 349 (570)
Q Consensus 272 ~Y~~~wd~~~~~l~~l~--~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYSf~~G~v~fI~Ldt~~ 349 (570)
...|+.+.+.++.+. ..+|+++++||||+.. .+....... + ......+|++++++++||+||+..
T Consensus 82 --~~~~~~~~~~l~~l~~~~~~pv~~v~GNHD~~~-----~~~~~~~~~--~----~~~~~~~~~~~~~~~~~i~lds~~ 148 (330)
T 3ib7_A 82 --PAAYRKLRGLVEPFAAQLGAELVWVMGNHDDRA-----ELRKFLLDE--A----PSMAPLDRVCMIDGLRIIVLDTSV 148 (330)
T ss_dssp --HHHHHHHHHHHHHHHHHHTCEEEECCCTTSCHH-----HHHHHHHCC--C----CCCSCCCEEEEETTEEEEECCCCC
T ss_pred --HHHHHHHHHHHHHHHhhcCCCEEEeCCCCCCHH-----HHHHHhccc--c----cccCCcceEEEeCCEEEEEecCCC
Confidence 134556666666653 3789999999999842 122211111 1 123457899999999999999874
Q ss_pred CC----CCCHHHHHHHHHHHhccccCCCCEEEEEeCCCccccCCCccc-chHHHHHHHHHHHHHcCCeEEEEccccccee
Q 008312 350 SF----DKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYR-EAECMRVAMEDLLYKYGVDVVFNGHQVHAYE 424 (570)
Q Consensus 350 ~~----~~~~~Q~~WLe~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~-~~~~~r~~l~~ll~~y~VdlvlsGH~~H~Ye 424 (570)
.. ....+|++||++.|++.... ++|+++|+|++........ .....++.+.+++.+++|+++|+|| +|..+
T Consensus 149 ~~~~~~~~~~~q~~wl~~~l~~~~~~---~~iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~~GH-~H~~~ 224 (330)
T 3ib7_A 149 PGHHHGEIRASQLGWLAEELATPAPD---GTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGH-LHYST 224 (330)
T ss_dssp TTCCSBCCCHHHHHHHHHHTTSCCTT---CEEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECS-SSSCE
T ss_pred CCCCCCccCHHHHHHHHHHHHhcccC---CeEEEEECCCCCCCccccccccccCHHHHHHHHhccCceEEEECC-CCCcc
Confidence 21 24689999999999986432 2677778887764322111 0011257888999999999999999 99887
Q ss_pred eeeccccCccCCCCcEEEEECCCCcc
Q 008312 425 RSNRVYNYTLDPCGPVHITVGDGGNR 450 (570)
Q Consensus 425 R~~pv~n~~~~~~g~vyiv~G~gG~~ 450 (570)
... -+|+.+++.|+.+..
T Consensus 225 ~~~--------~~g~~~~~~gs~~~~ 242 (330)
T 3ib7_A 225 NAT--------FVGIPVSVASATCYT 242 (330)
T ss_dssp EEE--------ETTEEEEECCCSSCE
T ss_pred cce--------ECCEEEEecCcceec
Confidence 543 257888888887753
No 7
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=99.87 E-value=1.1e-20 Score=189.28 Aligned_cols=193 Identities=16% Similarity=0.181 Sum_probs=128.6
Q ss_pred eEEEEEecCCCCC---------Ch----HHHHHHHHhC--CCCEEEEcCCcccccccccCCCCCCcccccCCCCCcccch
Q 008312 209 SRIAIVGDVGLTY---------NT----TSTVSHMISN--RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETY 273 (570)
Q Consensus 209 ~rf~vigD~g~~~---------~~----~~~i~~l~~~--~pDfvl~~GDl~Y~d~~~~~G~~~~c~~~~~~~~~~~e~Y 273 (570)
+||++++|+|... .. ..+++.+.+. ++|+||++||+++. |.
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~------~~------------------ 56 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNC------GR------------------ 56 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSS------CC------------------
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCC------CC------------------
Confidence 5899999999874 11 2344455543 68999999999953 21
Q ss_pred HHHHHHHHHhhhhhhccCCeEEeccCccccccccchhhhhhhcccCCCCCCCCCC-CcceEEEEeCeEEEEEeecCcCC-
Q 008312 274 QPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSL-SKFYYSFNAGGIHFLMLAAYVSF- 351 (570)
Q Consensus 274 ~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~-~~~yYSf~~G~v~fI~Ldt~~~~- 351 (570)
...|+.+.+.++.+ .+|+++++||||...... ..+...| ++.. .. ...+|+++.++++||+||+....
T Consensus 57 ~~~~~~~~~~l~~l--~~p~~~v~GNHD~~~~~~----~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~i~ld~~~~~~ 126 (274)
T 3d03_A 57 PEEYQVARQILGSL--NYPLYLIPGNHDDKALFL----EYLQPLC-PQLG---SDANNMRCAVDDFATRLLFIDSSRAGT 126 (274)
T ss_dssp HHHHHHHHHHHTTC--SSCEEEECCTTSCHHHHH----HHHGGGS-GGGC---SCGGGCCEEECSSSSEEEECCCCCTTC
T ss_pred HHHHHHHHHHHHhc--CCCEEEECCCCCCHHHHH----HHhhhhh-cCcc---cCCCceEEEEEeCCEEEEEEeCCCCCC
Confidence 13455566666655 689999999999853210 1121111 1110 11 24679999999999999986422
Q ss_pred ---CCCHHHHHHHHHHHhccccCCCCEEEEEeCCCccccCCCccc-chHHHHHHHHHHHHHc-CCeEEEEcccccceeee
Q 008312 352 ---DKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYR-EAECMRVAMEDLLYKY-GVDVVFNGHQVHAYERS 426 (570)
Q Consensus 352 ---~~~~~Q~~WLe~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~-~~~~~r~~l~~ll~~y-~VdlvlsGH~~H~YeR~ 426 (570)
....+|++||++.|++.. ..++|+++|+|++........ .....++.+.+++.++ +|+++|+|| +|.++..
T Consensus 127 ~~~~~~~~~~~wl~~~l~~~~---~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH-~H~~~~~ 202 (274)
T 3d03_A 127 SKGWLTDETISWLEAQLFEGG---DKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGH-NHSLTMT 202 (274)
T ss_dssp SSBCCCHHHHHHHHHHHHHHT---TSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECS-SSSCEEE
T ss_pred CCCeeCHHHHHHHHHHHHhCC---CCCEEEEECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCC-CCCchhh
Confidence 246899999999999852 356899999999865321110 0001246788999999 899999999 9998775
Q ss_pred eccccCccCCCCcEEEEECCC
Q 008312 427 NRVYNYTLDPCGPVHITVGDG 447 (570)
Q Consensus 427 ~pv~n~~~~~~g~vyiv~G~g 447 (570)
. .+|+.++++++.
T Consensus 203 ~--------~~g~~~~~~pg~ 215 (274)
T 3d03_A 203 Q--------YRQALISTLPGT 215 (274)
T ss_dssp E--------ETTEEEEECCCS
T ss_pred e--------ECCEEEEEcCCc
Confidence 3 245555555443
No 8
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=99.86 E-value=3.5e-21 Score=196.54 Aligned_cols=205 Identities=19% Similarity=0.177 Sum_probs=133.0
Q ss_pred CeEEEEEecCCCCCCh--------------------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCC
Q 008312 208 PSRIAIVGDVGLTYNT--------------------TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANS 267 (570)
Q Consensus 208 ~~rf~vigD~g~~~~~--------------------~~~i~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~c~~~~~~~~ 267 (570)
++||++++|+|..... ...++.+.+.+||+||++||+++..... .
T Consensus 5 ~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~--~------------- 69 (322)
T 2nxf_A 5 VFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRR--R------------- 69 (322)
T ss_dssp SEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHH--T-------------
T ss_pred ceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCc--c-------------
Confidence 6999999999987521 1234445567999999999999642100 0
Q ss_pred CcccchHHHHHHHHHhhhhhh-ccCCeEEeccCccccccccchhhhhhhcccCCCCCC--------CCCCCcceEEEEe-
Q 008312 268 PIHETYQPRWDYWGRYMQPVL-SKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKE--------SGSLSKFYYSFNA- 337 (570)
Q Consensus 268 ~~~e~Y~~~wd~~~~~l~~l~-~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~--------~~~~~~~yYSf~~- 337 (570)
...++.+...++.+. ..+|+++++||||..... ...+...|..+... .......||+|+.
T Consensus 70 ------~~~~~~~~~~~~~l~~~~~p~~~v~GNHD~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~ 139 (322)
T 2nxf_A 70 ------DASDRALDTVMAELDACSVDVHHVWGNHEFYNFS----RPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPA 139 (322)
T ss_dssp ------TCHHHHHHHHHHHHHTTCSEEEECCCHHHHHHCC----HHHHHTSTTCCCC------CEECGGGTCCCEEEEEE
T ss_pred ------hHHHHHHHHHHHHHHhcCCcEEEecCCCCcccCC----HHHHhhhhCCcccccccccccccCCCCceEEEEecC
Confidence 001333333333332 368999999999995211 11233333211000 0002357899998
Q ss_pred CeEEEEEeecCcC----------------------------------------------CCCCHHHHHHHHHHHhccccC
Q 008312 338 GGIHFLMLAAYVS----------------------------------------------FDKSGDQYKWLEEDLANVERE 371 (570)
Q Consensus 338 G~v~fI~Ldt~~~----------------------------------------------~~~~~~Q~~WLe~~L~~~~r~ 371 (570)
++++||+||+... .....+|++||+++|+++.+.
T Consensus 140 ~~~~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~ 219 (322)
T 2nxf_A 140 PNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHK 219 (322)
T ss_dssp TTEEEEECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEcCceecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHhc
Confidence 9999999998631 012389999999999987532
Q ss_pred CCCEEEEEeCCCccccCCCcccchHHHHHHHHHHHHHc-CCeEEEEcccccceeeeeccccCccCCCCcEEEEECCC
Q 008312 372 VTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKY-GVDVVFNGHQVHAYERSNRVYNYTLDPCGPVHITVGDG 447 (570)
Q Consensus 372 ~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y-~VdlvlsGH~~H~YeR~~pv~n~~~~~~g~vyiv~G~g 447 (570)
..++||++|+|++........ ....++.+.++|.++ +|+++|+|| +|.+++.. +..|+.|+++|+.
T Consensus 220 -~~~~iv~~H~p~~~~~~~~~~-~~~~~~~~~~ll~~~~~v~~~~~GH-~H~~~~~~-------~~~g~~~i~~~~~ 286 (322)
T 2nxf_A 220 -QERVLIFSHLPVHPCAADPIC-LAWNHEAVLSVLRSHQSVLCFIAGH-DHDGGRCT-------DSSGAQHITLEGV 286 (322)
T ss_dssp -TCEEEEEESSCCCTTSSCGGG-SCTTHHHHHHHHHTCTTEEEEEECS-CTTCEEEE-------CTTSCEEEECCCG
T ss_pred -CCcEEEEEccCCCCCCCCccc-cccCHHHHHHHHhcCCCeEEEEcCC-cCCCCcee-------ccCCceEEEecch
Confidence 246889999999875432110 011257888999999 799999999 99999874 2357888876655
No 9
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=99.77 E-value=2.1e-17 Score=177.95 Aligned_cols=194 Identities=15% Similarity=0.245 Sum_probs=123.6
Q ss_pred CCeEEEEEecCCCCCC-----------------------hHH----HHHHHHhCCCCEEEEcCCcccccccccCCCCCCc
Q 008312 207 YPSRIAIVGDVGLTYN-----------------------TTS----TVSHMISNRPDLILLVGDVTYANLYLTNGTGSDC 259 (570)
Q Consensus 207 ~~~rf~vigD~g~~~~-----------------------~~~----~i~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~c 259 (570)
.++||++++|+|.... ... .++.+.+.+||+||++||+++. |.
T Consensus 38 ~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~------~~---- 107 (443)
T 2xmo_A 38 RNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNN------GE---- 107 (443)
T ss_dssp CCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSS------CC----
T ss_pred CCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCC------CC----
Confidence 3799999999998532 122 3344445689999999999953 21
Q ss_pred ccccCCCCCcccchHHHHHHHHHhhhhhh-ccCCeEEeccCccccccccc------------hhhhhhhcccCCCC-CCC
Q 008312 260 YACSFANSPIHETYQPRWDYWGRYMQPVL-SKVPIMVVEGNHEYEEQAEN------------RTFVAYTSRFAFPS-KES 325 (570)
Q Consensus 260 ~~~~~~~~~~~e~Y~~~wd~~~~~l~~l~-~~iP~~~v~GNHD~~~~~~~------------~~~~~y~~~f~~P~-~~~ 325 (570)
...++.+.+.++.+. ..+|+++++||||+...... .....|...|.-.. ...
T Consensus 108 --------------~~~~~~~~~~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (443)
T 2xmo_A 108 --------------KTSHEELAKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDA 173 (443)
T ss_dssp --------------HHHHHHHHHHHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCCTTC
T ss_pred --------------HHHHHHHHHHHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcChhhh
Confidence 123445555566553 36899999999999643110 01122333332110 000
Q ss_pred ---CCCCcceEEEEeCeEEEEEeecCcC------------CCCCHHHHHHHHHHHhccccCCCCEEEEEeCCCccccCCC
Q 008312 326 ---GSLSKFYYSFNAGGIHFLMLAAYVS------------FDKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKA 390 (570)
Q Consensus 326 ---~~~~~~yYSf~~G~v~fI~Ldt~~~------------~~~~~~Q~~WLe~~L~~~~r~~~pwiIV~~H~P~y~s~~~ 390 (570)
......|+.+..++++||+||+... .....+|++||++.|+++.+.. ..+|+++|+|++.....
T Consensus 174 ~~~~~~~~~y~~~~~~~~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~~~-~~~Iv~~H~p~~~~~~~ 252 (443)
T 2xmo_A 174 ISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNG-AKLIPVLHHNLTDHNDV 252 (443)
T ss_dssp SEECSSSSCEEECSBSSEEEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHHTT-CEEEEECSSBSSCSSCC
T ss_pred hccCCCCceEEEecCCCEEEEEeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHHcC-CeEEEEECCCCcccccc
Confidence 0112234445688999999998642 1246899999999999875432 45788999998864321
Q ss_pred cccc-hHHHHHHHHHHHHHcCCeEEEEcccccceeee
Q 008312 391 HYRE-AECMRVAMEDLLYKYGVDVVFNGHQVHAYERS 426 (570)
Q Consensus 391 ~~~~-~~~~r~~l~~ll~~y~VdlvlsGH~~H~YeR~ 426 (570)
.... ....++.+.+++.+++|+++|+|| +|..+..
T Consensus 253 ~~~~~~~~~~~~l~~ll~~~~v~lvl~GH-~H~~~~~ 288 (443)
T 2xmo_A 253 IQKGYTINYNQQVIDALTEGAMDFSLSGH-IHTQNIR 288 (443)
T ss_dssp --CCSBCTTHHHHHHHHHHTTCCEEEECS-SCSCEEE
T ss_pred cccccccccHHHHHHHHHHcCCeEEEECC-cccCchh
Confidence 1100 011257788999999999999999 9987654
No 10
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=99.47 E-value=3.8e-13 Score=130.34 Aligned_cols=170 Identities=9% Similarity=-0.009 Sum_probs=96.8
Q ss_pred CeEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCcccchHHHHHHHHHhhhh
Q 008312 208 PSRIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQP 286 (570)
Q Consensus 208 ~~rf~vigD~g~~~~~-~~~i~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~c~~~~~~~~~~~e~Y~~~wd~~~~~l~~ 286 (570)
++||+++||+|..... ...++.+.+.++|+||++||+++. +.. ...+..+.+.++.
T Consensus 5 ~mri~~iSD~H~~~~~~~~~~~~~~~~~~D~vi~~GDl~~~------~~~-----------------~~~~~~~~~~l~~ 61 (228)
T 1uf3_A 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPK------AAK-----------------SRDYAAFFRILSE 61 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCT------TCC-----------------HHHHHHHHHHHGG
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHhhcCCCEEEECCCCCCC------CCC-----------------HHHHHHHHHHHHh
Confidence 5899999999986322 223334444589999999999953 210 1122333343433
Q ss_pred hhccCCeEEeccCccccccccchhhhhhhccc----CCCCCCCCCCCcceEEEEeC-eEEEEEeecCc--CCCCC-----
Q 008312 287 VLSKVPIMVVEGNHEYEEQAENRTFVAYTSRF----AFPSKESGSLSKFYYSFNAG-GIHFLMLAAYV--SFDKS----- 354 (570)
Q Consensus 287 l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f----~~P~~~~~~~~~~yYSf~~G-~v~fI~Ldt~~--~~~~~----- 354 (570)
..+|+++++||||.... ..+...+ ..|... ...+. .+.++ +++|+.++... .+...
T Consensus 62 --~~~pv~~v~GNHD~~~~------~~~~~~~~~~~~~~~~~--~l~~~--~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 129 (228)
T 1uf3_A 62 --AHLPTAYVPGPQDAPIW------EYLREAANVELVHPEMR--NVHET--FTFWRGPYLVAGVGGEIADEGEPEEHEAL 129 (228)
T ss_dssp --GCSCEEEECCTTSCSHH------HHHHHHHHHHHHCTTEE--ECBTS--EEEETTTEEEEEECSEEESSSCCBSSSSC
T ss_pred --cCCcEEEECCCCCchhH------HHHHhhhhhhccCcceE--Ecccc--eEeeCCCcEEecCCCCcCCCCccChhhcc
Confidence 25799999999998531 1111111 011100 00011 24455 78999887431 11111
Q ss_pred ---HHHHHHHHHHHhccccCCCCEEEEEeCCCccccCCCcccchHHHHHHHHHHHHHcCCeEEEEccccc
Q 008312 355 ---GDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHQVH 421 (570)
Q Consensus 355 ---~~Q~~WLe~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~~H 421 (570)
..+.+|+++.|++.. ..+.|++.|+|++.....+.. ...+.+++.+++++++++|| +|
T Consensus 130 ~~~~~~~~~~~~~l~~~~---~~~~il~~H~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~GH-~H 190 (228)
T 1uf3_A 130 RYPAWVAEYRLKALWELK---DYPKIFLFHTMPYHKGLNEQG-----SHEVAHLIKTHNPLLVLVAG-KG 190 (228)
T ss_dssp EEEHHHHHHHHGGGGGSC---SCCEEEEESSCBCBTTTBTTS-----BHHHHHHHHHHCCSEEEECC-SS
T ss_pred cchhhhHHHHHHHHHhCC---CCCeEEEEccCcccCCccccC-----HHHHHHHHHHhCCCEEEEcc-cc
Confidence 222344455555532 235788999998764211211 13566788889999999999 99
No 11
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=99.47 E-value=2.8e-13 Score=134.51 Aligned_cols=199 Identities=12% Similarity=0.181 Sum_probs=100.0
Q ss_pred CeEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCcccchHHH----HHHHHH
Q 008312 208 PSRIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPR----WDYWGR 282 (570)
Q Consensus 208 ~~rf~vigD~g~~~~~-~~~i~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~c~~~~~~~~~~~e~Y~~~----wd~~~~ 282 (570)
++||+++||+|..... ...++.+.+.++|+||++||++...... ......+... ..|..+.|+.. .+.+.+
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~~~~~~~~D~vi~~GDl~~~~~~~-~~~~~~~~~~---~~p~~~~~~~~~~~~~~~~~~ 80 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALE-KEYERAHLAR---REPNRKVIHENEHYIIETLDK 80 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHHH-HHHHHHHHTT---CCCCTHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChHHHHHHHHHHHhcCCCEEEECCCCCCccCcc-hhhhhhhhhh---cccchhhhhHHHHHHHHHHHH
Confidence 5899999999987543 3455555567999999999998531000 0000000000 00000111110 022344
Q ss_pred hhhhhhc-cCCeEEeccCccccccccchhhhhhhcccC-CCCCCCCCCCcceEEEEeCeEEEEEeecCcCC-CCCHHHH-
Q 008312 283 YMQPVLS-KVPIMVVEGNHEYEEQAENRTFVAYTSRFA-FPSKESGSLSKFYYSFNAGGIHFLMLAAYVSF-DKSGDQY- 358 (570)
Q Consensus 283 ~l~~l~~-~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~-~P~~~~~~~~~~yYSf~~G~v~fI~Ldt~~~~-~~~~~Q~- 358 (570)
+++.+.. .+|+++++||||..... .+........ .|.- .... ....+++++++|+.++..... ....+|.
T Consensus 81 ~l~~l~~~~~pv~~v~GNHD~~~~~---~~~~~~~~~~~~~~~--~~l~-~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 154 (260)
T 2yvt_A 81 FFREIGELGVKTFVVPGKNDAPLKI---FLRAAYEAETAYPNI--RVLH-EGFAGWRGEFEVIGFGGLLTEHEFEEDFVL 154 (260)
T ss_dssp HHHHHHTTCSEEEEECCTTSCCHHH---HHHHHHHTTTTCTTE--EECS-SEEEEETTTEEEEEECSEEESSCCBSSSSC
T ss_pred HHHHHHhcCCcEEEEcCCCCchhhh---hHHHHhhhccCCcce--EEec-CcceEEECCEEEEecCCCcCCCCcCHHHHh
Confidence 4454433 58999999999985311 0001111110 0000 0000 112377889999999753210 0111222
Q ss_pred --------HHHHHHHhccccCCCCEEEEEeCCCccccCCCcc--cchHHHHHHHHHHHHHcCCeEEEEccccc
Q 008312 359 --------KWLEEDLANVEREVTPWLVATWHAPWYSTYKAHY--REAECMRVAMEDLLYKYGVDVVFNGHQVH 421 (570)
Q Consensus 359 --------~WLe~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~--~~~~~~r~~l~~ll~~y~VdlvlsGH~~H 421 (570)
+|| +.|++.. . ...|++.|+|++....... .....-.+.+.+++.+++++++++|| +|
T Consensus 155 ~~~~~~~~~~l-~~l~~~~--~-~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~vl~GH-~H 222 (260)
T 2yvt_A 155 KYPRWYVEYIL-KFVNELK--P-RRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGH-VG 222 (260)
T ss_dssp EEEHHHHHHHG-GGGGGSC--C-CEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECS-SC
T ss_pred hcchhhHHHHH-HHHHhcC--C-CCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCEEEECC-cc
Confidence 344 3344322 2 2458888999874311100 00000124566788889999999999 99
No 12
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=99.39 E-value=1.3e-12 Score=135.53 Aligned_cols=187 Identities=16% Similarity=0.136 Sum_probs=98.0
Q ss_pred CeEEEEEecCCCC----CC---------hHHH----HHHHHhCCCCEEEEcCC-cccccccccCCCCCCcccccCCCCCc
Q 008312 208 PSRIAIVGDVGLT----YN---------TTST----VSHMISNRPDLILLVGD-VTYANLYLTNGTGSDCYACSFANSPI 269 (570)
Q Consensus 208 ~~rf~vigD~g~~----~~---------~~~~----i~~l~~~~pDfvl~~GD-l~Y~d~~~~~G~~~~c~~~~~~~~~~ 269 (570)
.+||++++|+|.+ .. .... ++.+.+.+||+||++|| ++.. +. +.
T Consensus 18 ~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~------~~------------~~ 79 (336)
T 2q8u_A 18 ELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSR------NN------------PS 79 (336)
T ss_dssp EEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCS------SC------------CC
T ss_pred ceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCC------CC------------CC
Confidence 6999999999976 21 1223 34444569999999999 6531 11 11
Q ss_pred ccchHHHHHHHHHhhhhhhccCCeEEeccCccccccccchhhhhhhcc----cCCCCCCCCCCCcceEEEEeCeEEEEEe
Q 008312 270 HETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSR----FAFPSKESGSLSKFYYSFNAGGIHFLML 345 (570)
Q Consensus 270 ~e~Y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~----f~~P~~~~~~~~~~yYSf~~G~v~fI~L 345 (570)
......+.++++.+...+|+++++||||... . ..+..+... +.+-.+.. ....+.++.+++.|+.+
T Consensus 80 ----~~~~~~~~~~l~~L~~~~pv~~i~GNHD~~~-~--~~~~~~l~~~g~nv~v~~~~~---~~~~~~~~~~~v~i~gl 149 (336)
T 2q8u_A 80 ----VVALHDLLDYLKRMMRTAPVVVLPGNHDWKG-L--KLFGNFVTSISSDITFVMSFE---PVDVEAKRGQKVRILPF 149 (336)
T ss_dssp ----HHHHHHHHHHHHHHHHHSCEEECCC-------C--HHHHHHHHHHCSSEEECCSSS---CEEEECTTSCEEEEEEE
T ss_pred ----HHHHHHHHHHHHHHHhcCCEEEECCCCCccc-c--ccHHHHHHhcCCEEEEEeccc---ccCceEEeCCCEEEEEC
Confidence 1122345556666543389999999999864 1 112222211 11111100 00011223467889888
Q ss_pred ecCcCC-------CCCHHHHHHHHHHHhccccCCCCEEEEEeCCCccccCCCcccchHH-H-HHHHHHHHHHcCCeEEEE
Q 008312 346 AAYVSF-------DKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAEC-M-RVAMEDLLYKYGVDVVFN 416 (570)
Q Consensus 346 dt~~~~-------~~~~~Q~~WLe~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~-~-r~~l~~ll~~y~Vdlvls 416 (570)
+..... ....+|++|+.+.|...-+....+.|++.|.|.+..... +.+. + ...+...+.+.++|++++
T Consensus 150 p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~---~~~~~~~~~~v~~~l~~~~~d~v~~ 226 (336)
T 2q8u_A 150 PYPDESEALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGY---AGIEQGREIIINRALIPSVVDYAAL 226 (336)
T ss_dssp CCC-------CCSSHHHHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC-----------CCCEECGGGSCTTSSEEEE
T ss_pred CCCCHHHHHHHhhHHHHHHHHHHHHHHHHhccCCCCCEEEEECccccCCCCC---CCccchhhcccCHHHccccCCEEEE
Confidence 643211 112467899988886531012457899999998753211 0000 0 000111234468999999
Q ss_pred cccccceeee
Q 008312 417 GHQVHAYERS 426 (570)
Q Consensus 417 GH~~H~YeR~ 426 (570)
|| .|..+..
T Consensus 227 GH-~H~~~~~ 235 (336)
T 2q8u_A 227 GH-IHSFREI 235 (336)
T ss_dssp ES-CSSCEEE
T ss_pred cc-ccCceEe
Confidence 99 9988765
No 13
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=99.18 E-value=2.1e-09 Score=102.48 Aligned_cols=134 Identities=14% Similarity=0.297 Sum_probs=81.7
Q ss_pred CeEEEEEecCCCCCC---hHHHHHHHH-hCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCcccchHHHHHHHHHh
Q 008312 208 PSRIAIVGDVGLTYN---TTSTVSHMI-SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRY 283 (570)
Q Consensus 208 ~~rf~vigD~g~~~~---~~~~i~~l~-~~~pDfvl~~GDl~Y~d~~~~~G~~~~c~~~~~~~~~~~e~Y~~~wd~~~~~ 283 (570)
-+||+++||+|.... ....+.++. +.++|+|+++||++.. .. .+.
T Consensus 10 mm~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d~ii~~GDl~~~---------------------------~~----~~~ 58 (192)
T 1z2w_A 10 RMLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTK---------------------------ES----YDY 58 (192)
T ss_dssp -CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBSH---------------------------HH----HHH
T ss_pred ceEEEEEecCCCCccchhHHHHHHHHhccCCCCEEEEcCCCCCH---------------------------HH----HHH
Confidence 379999999997532 223333333 3579999999999831 11 222
Q ss_pred hhhhhccCCeEEeccCccccccccchhhhhhhcccCCCCCCCCCCCcceEEEEeCeEEEEEeecCcCCCCCHHHHHHHHH
Q 008312 284 MQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFDKSGDQYKWLEE 363 (570)
Q Consensus 284 l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYSf~~G~v~fI~Ldt~~~~~~~~~Q~~WLe~ 363 (570)
++.+ ..|+++|+||||... .+|. ...++.
T Consensus 59 l~~~--~~~~~~v~GNhD~~~--------------~lp~---------~~~~~~-------------------------- 87 (192)
T 1z2w_A 59 LKTL--AGDVHIVRGDFDENL--------------NYPE---------QKVVTV-------------------------- 87 (192)
T ss_dssp HHHH--CSEEEECCCTTCCCT--------------TSCS---------EEEEEE--------------------------
T ss_pred HHhc--CCCEEEEcCCcCccc--------------cCCc---------ceEEEE--------------------------
Confidence 3332 258999999999742 1221 111111
Q ss_pred HHhccccCCCCEEEEEeCCCccccCCCcccchHHHHHHHHHHHHHcCCeEEEEcccccceeeeeccccCccCCCCcEEEE
Q 008312 364 DLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHQVHAYERSNRVYNYTLDPCGPVHIT 443 (570)
Q Consensus 364 ~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~~H~YeR~~pv~n~~~~~~g~vyiv 443 (570)
..+.|++.|.+++.... . .+.+..++.+.++|++++|| +|...... .+|+.+|.
T Consensus 88 ---------~~~~i~l~Hg~~~~~~~----~----~~~l~~~~~~~~~d~vi~GH-tH~~~~~~--------~~~~~~in 141 (192)
T 1z2w_A 88 ---------GQFKIGLIHGHQVIPWG----D----MASLALLQRQFDVDILISGH-THKFEAFE--------HENKFYIN 141 (192)
T ss_dssp ---------TTEEEEEECSCCCCBTT----C----HHHHHHHHHHHSSSEEECCS-SCCCEEEE--------ETTEEEEE
T ss_pred ---------CCEEEEEECCCcCCCCC----C----HHHHHHHHHhcCCCEEEECC-cCcCccEe--------ECCEEEEE
Confidence 12568888855543211 1 23456677788999999999 99765332 24677777
Q ss_pred ECCCCc
Q 008312 444 VGDGGN 449 (570)
Q Consensus 444 ~G~gG~ 449 (570)
.|+.+.
T Consensus 142 pGS~~~ 147 (192)
T 1z2w_A 142 PGSATG 147 (192)
T ss_dssp CCCTTC
T ss_pred CCcccc
Confidence 776653
No 14
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=99.18 E-value=2.6e-10 Score=116.04 Aligned_cols=194 Identities=14% Similarity=0.097 Sum_probs=104.9
Q ss_pred CeEEEEEecCCCCCChHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCcccchHHHHHHHHHhhhhh
Q 008312 208 PSRIAIVGDVGLTYNTTSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPV 287 (570)
Q Consensus 208 ~~rf~vigD~g~~~~~~~~i~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~c~~~~~~~~~~~e~Y~~~wd~~~~~l~~l 287 (570)
.+||+++||+|..... + .-.++|+||++||++.. |. ..+.+.+.++++.+
T Consensus 59 ~mri~~iSD~H~~~~~---l---~i~~~D~vi~aGDl~~~------g~------------------~~e~~~~~~~L~~l 108 (296)
T 3rl5_A 59 HTRFVCISDTRSRTDG---I---QMPYGDILLHTGDFTEL------GL------------------PSEVKKFNDWLGNL 108 (296)
T ss_dssp EEEEEEEBCCTTCCTT---C---CCCSCSEEEECSCCSSS------CC------------------HHHHHHHHHHHHTS
T ss_pred CeEEEEEeeCCCCcch---h---ccCCCCEEEECCcccCC------CC------------------HHHHHHHHHHHHhC
Confidence 5899999999987432 1 12479999999999952 22 12334455555554
Q ss_pred hccCCeEEeccCccccccccchhhhhhh----ccc----CCCCC---CCCC-CCcce----EEEEeCeEEEEEeecCcCC
Q 008312 288 LSKVPIMVVEGNHEYEEQAENRTFVAYT----SRF----AFPSK---ESGS-LSKFY----YSFNAGGIHFLMLAAYVSF 351 (570)
Q Consensus 288 ~~~iP~~~v~GNHD~~~~~~~~~~~~y~----~~f----~~P~~---~~~~-~~~~y----YSf~~G~v~fI~Ldt~~~~ 351 (570)
. ..++++|+||||...+.. .+.... .++ ..+.. .-.. ..+.. -+..+++++|+...--..+
T Consensus 109 ~-~~~v~~V~GNHD~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~i~Gl~i~Gsp~tP~~ 185 (296)
T 3rl5_A 109 P-YEYKIVIAGNHELTFDKE--FMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWF 185 (296)
T ss_dssp C-CSEEEECCCTTCGGGCHH--HHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSEEEEETTEEEEEECCBCC-
T ss_pred C-CCeEEEEcCCcccccchh--hhhhhhcccccccccccccccchhhhHhhhcCCeEEecCCcEEECCEEEEEecCCCCC
Confidence 2 246899999999964321 111100 000 00000 0000 00111 2355678898885432111
Q ss_pred C---CCHHHHHHHHHHHhccccCCCCEEEEEeCCCccccCCC------cccchHHHHHHHHHHH-HHcCCeEEEEccccc
Q 008312 352 D---KSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKA------HYREAECMRVAMEDLL-YKYGVDVVFNGHQVH 421 (570)
Q Consensus 352 ~---~~~~Q~~WLe~~L~~~~r~~~pwiIV~~H~P~y~s~~~------~~~~~~~~r~~l~~ll-~~y~VdlvlsGH~~H 421 (570)
. ...++.+++.+...... . ...|++.|.|++..... +.+ . +.|.+.+ .+++++++++|| +|
T Consensus 186 ~~~~f~~~~~~~~~~~~~~ip-~--~~dILvTH~PP~g~~D~~~~~~~~~G-~----~~L~~~i~~~~~p~l~v~GH-~H 256 (296)
T 3rl5_A 186 NGWGFNLPRGQSLLDKWNLIP-E--GTDILMTHGPPLGFRDWVPKELQRVG-C----VELLNTVQRRVRPKLHVFGG-IH 256 (296)
T ss_dssp -CCTTBCCTTHHHHHHHTTSC-T--TCSEEEESSCBTTSSCEEGGGTEECS-B----HHHHHHHHHTTCCSEEEECS-CG
T ss_pred CCcCCCcchHHHHHHHHhhCC-C--CCeEEEECCCccccccccccccCcCC-h----HHHHHHHHHhcCCCEEEECC-cc
Confidence 1 11122224433333332 2 23588899999875321 112 1 3444555 689999999999 99
Q ss_pred ceeeeeccccCccCCCCcEEEEECCCCcc
Q 008312 422 AYERSNRVYNYTLDPCGPVHITVGDGGNR 450 (570)
Q Consensus 422 ~YeR~~pv~n~~~~~~g~vyiv~G~gG~~ 450 (570)
....... -+++++|-.|+-|..
T Consensus 257 ~~~~~~~-------~g~t~vvNpGs~~~~ 278 (296)
T 3rl5_A 257 EGYGTMT-------DGYTTYINASTCTVS 278 (296)
T ss_dssp GGCEEEE-------CSSCEEEECBCSCTT
T ss_pred CCCceEE-------ECCEEEEECCcCCcC
Confidence 7533211 256788877777653
No 15
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=99.16 E-value=7.1e-10 Score=107.81 Aligned_cols=143 Identities=14% Similarity=0.331 Sum_probs=83.4
Q ss_pred CeEEEEEecCCCCCCh---HHHHHHHH-hCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCcccchHHHHHHHHHh
Q 008312 208 PSRIAIVGDVGLTYNT---TSTVSHMI-SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRY 283 (570)
Q Consensus 208 ~~rf~vigD~g~~~~~---~~~i~~l~-~~~pDfvl~~GDl~Y~d~~~~~G~~~~c~~~~~~~~~~~e~Y~~~wd~~~~~ 283 (570)
.+||+++||+|..... ...+.++. +.++|+||++||++.. ...+.
T Consensus 25 ~m~i~~iSD~H~~~~~~~l~~~l~~~~~~~~~D~vi~~GDl~~~-------------------------------~~l~~ 73 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCSQ-------------------------------EYVEM 73 (215)
T ss_dssp CEEEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCCH-------------------------------HHHHH
T ss_pred CcEEEEEecCCCCCChHHHHHHHHHHHhcCCCCEEEECCCCCCH-------------------------------HHHHH
Confidence 4799999999986422 23444443 4689999999999831 11223
Q ss_pred hhhhhccCCeEEeccCccccccccchhhhhhhcccCCCCCCCCCCCcceEEEEeCeEEEEEeecCcCCCCCHHHHHHHHH
Q 008312 284 MQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFDKSGDQYKWLEE 363 (570)
Q Consensus 284 l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYSf~~G~v~fI~Ldt~~~~~~~~~Q~~WLe~ 363 (570)
++.+ ..|+++|+||||....... ..+.. .+|. ...+
T Consensus 74 l~~~--~~~v~~V~GNHD~~~~~~~---~~~~~--~lp~---------~~~~---------------------------- 109 (215)
T 2a22_A 74 LKNI--TKNVYIVSGDLDSAIFNPD---PESNG--VFPE---------YVVV---------------------------- 109 (215)
T ss_dssp HHHH--CSCEEECCCTTCCSCCBCC---GGGTB--CCCS---------EEEE----------------------------
T ss_pred HHHc--CCCEEEecCCCcCcccccC---hhhHh--hCCc---------eEEE----------------------------
Confidence 3333 3689999999998532100 00000 0000 0000
Q ss_pred HHhccccCCCCEEEEEeCCCccccCCCcccchHHHHHHHHHHHHHcCCeEEEEcccccceeeeeccccCccCCCCcEEEE
Q 008312 364 DLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHQVHAYERSNRVYNYTLDPCGPVHIT 443 (570)
Q Consensus 364 ~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~~H~YeR~~pv~n~~~~~~g~vyiv 443 (570)
+ ...+.|++.|.+++... . . .+.+..++.+.++|++++|| +|...... .+++.+|.
T Consensus 110 ---~----~~~~~i~l~Hg~~~~~~---~-~----~~~l~~~~~~~~~d~vl~GH-tH~~~~~~--------~~~~~~in 165 (215)
T 2a22_A 110 ---Q----IGEFKIGLMHGNQVLPW---D-D----PGSLEQWQRRLDCDILVTGH-THKLRVFE--------KNGKLFLN 165 (215)
T ss_dssp ---E----ETTEEEEEECSTTSSST---T-C----HHHHHHHHHHHTCSEEEECS-SCCCEEEE--------ETTEEEEE
T ss_pred ---e----cCCeEEEEEcCCccCCC---C-C----HHHHHHHHhhcCCCEEEECC-cCCCccEe--------eCCEEEEE
Confidence 0 01246888885544321 1 1 23556777788999999999 99764321 24677776
Q ss_pred ECCCCc
Q 008312 444 VGDGGN 449 (570)
Q Consensus 444 ~G~gG~ 449 (570)
.|+.+.
T Consensus 166 pGS~~~ 171 (215)
T 2a22_A 166 PGTATG 171 (215)
T ss_dssp CCCSSC
T ss_pred CCcccc
Confidence 676654
No 16
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=99.14 E-value=1.9e-09 Score=101.22 Aligned_cols=58 Identities=9% Similarity=0.035 Sum_probs=40.0
Q ss_pred EEEEEeCCCccccCCCcccchHHHHHHHHHHHHHcCCeEEEEcccccceeeeeccccCccCCCCcEEEEECCCCc
Q 008312 375 WLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHQVHAYERSNRVYNYTLDPCGPVHITVGDGGN 449 (570)
Q Consensus 375 wiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~~H~YeR~~pv~n~~~~~~g~vyiv~G~gG~ 449 (570)
+.|++.|.|++.... . .+.+.+++.++++|++++|| +|...... .+++.+|..|+.|.
T Consensus 78 ~~i~~~Hg~~~~~~~----~----~~~l~~~~~~~~~d~vi~GH-tH~~~~~~--------~~~~~~inpGs~~~ 135 (176)
T 3ck2_A 78 TKIIQTHGHLFDINF----N----FQKLDYWAQEEEAAICLYGH-LHVPSAWL--------EGKILFLNPGSISQ 135 (176)
T ss_dssp EEEEEECSGGGTTTT----C----SHHHHHHHHHTTCSEEECCS-SCCEEEEE--------ETTEEEEEECCSSS
T ss_pred eEEEEECCCccCCCC----C----HHHHHHHHHhcCCCEEEECC-cCCCCcEE--------ECCEEEEECCCCCc
Confidence 468888988775321 1 13466777889999999999 99765432 24677777776653
No 17
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.13 E-value=8.5e-11 Score=116.39 Aligned_cols=186 Identities=8% Similarity=0.002 Sum_probs=98.6
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHH---hC--CCCEEEEcCCcccccccccCCCCCCcccccCCCCCcccchHHHHHHHHH
Q 008312 209 SRIAIVGDVGLTYNT-TSTVSHMI---SN--RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGR 282 (570)
Q Consensus 209 ~rf~vigD~g~~~~~-~~~i~~l~---~~--~pDfvl~~GDl~Y~d~~~~~G~~~~c~~~~~~~~~~~e~Y~~~wd~~~~ 282 (570)
+||+++||+|..... ...++.+. +. ++|+||++||++.. |.. . .+..+
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~------g~~------------------~--~~~~~ 55 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGL------FPY------------------P--KEVIE 55 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSS------SSC------------------H--HHHHH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCC------CCC------------------H--HHHHH
Confidence 589999999975322 23455555 55 79999999999942 210 0 12233
Q ss_pred hhhhhhccCCeEEeccCccccccccchhhhhhhcccCCCCCCCCCCCcceEEEEeCeEEEEEeec--CcCCCCCHHHHHH
Q 008312 283 YMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAA--YVSFDKSGDQYKW 360 (570)
Q Consensus 283 ~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYSf~~G~v~fI~Ldt--~~~~~~~~~Q~~W 360 (570)
.+..+....|+++++||||..... +...+. .. .. ...++..... ... +..-....+|++|
T Consensus 56 ~l~~l~~~~~~~~v~GNhD~~~~~-------~~~~~~-~~------~~-~~~~~~~~~~---~~~~~~~~~~l~~~~~~~ 117 (252)
T 1nnw_A 56 VIKDLTKKENVKIIRGKYDQIIAM-------SDPHAT-DP------GY-IDKLELPGHV---KKALKFTWEKLGHEGREY 117 (252)
T ss_dssp HHHHHHHHSCEEEECCHHHHHHHH-------SCTTCS-SS------GG-GGGSSCCHHH---HHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHhhcCeeEEecchHHHhhc-------cccccC-Cc------cc-ccchhhhHHH---HHHHHHHHHHCCHHHHHH
Confidence 344443336899999999974210 001110 00 00 0000000000 000 0000123578899
Q ss_pred HHHHHhccccCCCCEEEEEeCCCccccC-CCcccchHHHHHHHHHHHHHc-CCeEEEEcccccceeeeeccccCccCCCC
Q 008312 361 LEEDLANVEREVTPWLVATWHAPWYSTY-KAHYREAECMRVAMEDLLYKY-GVDVVFNGHQVHAYERSNRVYNYTLDPCG 438 (570)
Q Consensus 361 Le~~L~~~~r~~~pwiIV~~H~P~y~s~-~~~~~~~~~~r~~l~~ll~~y-~VdlvlsGH~~H~YeR~~pv~n~~~~~~g 438 (570)
|++.............|++.|++++... ...... ...+.+..++.++ +++++++|| +|...... .+|
T Consensus 118 L~~lp~~~~~~~~~~~i~~~H~~p~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~vi~GH-tH~~~~~~--------~~~ 186 (252)
T 1nnw_A 118 LRDLPIYLVDKIGGNEVFGVYGSPINPFDGEVLAE--QPTSYYEAIMRPVKDYEMLIVAS-PMYPVDAM--------TRY 186 (252)
T ss_dssp HHTSCSCEEEEETTEEEEEESSCSSCTTTCCCCSS--CCHHHHHHHHGGGTTSSEEEEST-TCSEEEEE--------ETT
T ss_pred HHhCCceEEEeeCCcEEEEEcCCCCCCcccccCCC--CCHHHHHHHHhcCCCCCEEEECC-ccccceEe--------cCC
Confidence 8764332211111236777787764321 111111 0124667788888 999999999 99765432 247
Q ss_pred cEEEEECCCCc
Q 008312 439 PVHITVGDGGN 449 (570)
Q Consensus 439 ~vyiv~G~gG~ 449 (570)
+++|..|+.|.
T Consensus 187 ~~~in~Gs~~~ 197 (252)
T 1nnw_A 187 GRVVCPGSVGF 197 (252)
T ss_dssp EEEEEECCSSS
T ss_pred eEEEECCCccC
Confidence 78888888765
No 18
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=99.12 E-value=8.3e-10 Score=116.81 Aligned_cols=174 Identities=16% Similarity=0.130 Sum_probs=93.6
Q ss_pred CeEEEEEecCCCCCC--------------hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCcccch
Q 008312 208 PSRIAIVGDVGLTYN--------------TTSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETY 273 (570)
Q Consensus 208 ~~rf~vigD~g~~~~--------------~~~~i~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~c~~~~~~~~~~~e~Y 273 (570)
++||++++|+|.+.. ....++.+.+.+||+||++||++.. +. +.
T Consensus 20 ~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~------~~------------p~---- 77 (386)
T 3av0_A 20 HMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFND------LR------------PP---- 77 (386)
T ss_dssp CCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSS------SS------------CC----
T ss_pred CeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCC------CC------------CC----
Confidence 699999999998742 1223444456799999999999842 11 10
Q ss_pred HHHHHHHHHhhhhhhc-cCCeEEeccCccccccccch-hhhhhhcccCCCCCCCCCCCcceEEEEeCeEEEEEeecCcCC
Q 008312 274 QPRWDYWGRYMQPVLS-KVPIMVVEGNHEYEEQAENR-TFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSF 351 (570)
Q Consensus 274 ~~~wd~~~~~l~~l~~-~iP~~~v~GNHD~~~~~~~~-~~~~y~~~f~~P~~~~~~~~~~yYSf~~G~v~fI~Ldt~~~~ 351 (570)
...+..+.+.++.+.. .+|+++++||||........ ....+...+..-. ...++..+-+++.++.++.....
T Consensus 78 ~~~~~~~~~~l~~L~~~~~pv~~v~GNHD~~~~~~~~~~~~~l~~~v~~l~------~~~v~~~~~~~v~i~gl~~~~~~ 151 (386)
T 3av0_A 78 VKALRIAMQAFKKLHENNIKVYIVAGNHEMPRRLGEESPLALLKDYVKILD------GKDVINVNGEEIFICGTYYHKKS 151 (386)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEECCCGGGSCSSTTSCCGGGGGTTTCEECS------EEEEEEETTEEEEEEEECCCCST
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEcCCCCCCccccccCHHHHHHHHeEEcC------CCcEEEeCCCCEEEEeCCCCCHH
Confidence 1223445566666643 58999999999986432110 0011111010000 01122222256888888764322
Q ss_pred CCCHHHHHHH---HHHHhccccCCCCEEEEEeCCCccccCCCcccchHHHHHHHHHHHHHcCCeEEEEcccccceee
Q 008312 352 DKSGDQYKWL---EEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHQVHAYER 425 (570)
Q Consensus 352 ~~~~~Q~~WL---e~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~~H~YeR 425 (570)
. .....+|| ...+.. ..+.|++.|.|........+.. .+.. +. ++|++++|| +|..++
T Consensus 152 ~-~~~~~~~l~~l~~~~~~-----~~~~Ill~H~~~~~~~~~~~~~------~~~~-l~--~~d~v~~GH-~H~~~~ 212 (386)
T 3av0_A 152 K-REEMLDKLKNFESEAKN-----YKKKILMLHQGINPYIPLDYEL------EHFD-LP--KFSYYALGH-IHKRIL 212 (386)
T ss_dssp T-HHHHHHHHHHHHHHHHT-----CSSEEEEECCCCTTTSSSSCSS------CGGG-SC--CCSEEEECS-CCSCEE
T ss_pred H-HHHHHHHHHHhhhhccc-----CCCEEEEECcCccccCCCCccc------CHHH-hh--hCCeEEccC-CCCCcc
Confidence 1 12223333 333221 2357889999875321111110 0011 11 399999999 998754
No 19
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=99.08 E-value=4.1e-10 Score=113.50 Aligned_cols=185 Identities=17% Similarity=0.154 Sum_probs=100.8
Q ss_pred CeEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCcccchHHHHHHHHHhhhh
Q 008312 208 PSRIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQP 286 (570)
Q Consensus 208 ~~rf~vigD~g~~~~~-~~~i~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~c~~~~~~~~~~~e~Y~~~wd~~~~~l~~ 286 (570)
+.||+++||+|..... ...++.+.+.++|.|+++||++.. |.. ..+..+.++.
T Consensus 11 ~~~i~~iSDiHg~~~~l~~vl~~~~~~~~D~ii~~GDlv~~------g~~--------------------~~~~~~~l~~ 64 (270)
T 3qfm_A 11 MTKIALLSDIHGNTTALEAVLADARQLGVDEYWLLGDILMP------GTG--------------------RRRILDLLDQ 64 (270)
T ss_dssp CEEEEEECCCTTCHHHHHHHHHHHHHTTCCEEEECSCCSSS------SSC--------------------SHHHHHHHHT
T ss_pred ccEEEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCC------CCC--------------------HHHHHHHHHc
Confidence 7899999999975322 234555666789999999999942 210 0223333333
Q ss_pred hhccCCeEEeccCccccccccchhhhhhhcccCCCCCCCCCCCcceEEEEeCeEEEEEeecCcCCCCCHHHHHHHHHHHh
Q 008312 287 VLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFDKSGDQYKWLEEDLA 366 (570)
Q Consensus 287 l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYSf~~G~v~fI~Ldt~~~~~~~~~Q~~WLe~~L~ 366 (570)
+ .|+++|.||||.... ......+.+... ...+.+ . ...+..-....+|++||++.-.
T Consensus 65 ~---~~~~~v~GNhD~~~~------~~~~~~~~~~~~-----~~~~~~----~-----~~~~~~~~L~~~~~~~L~~LP~ 121 (270)
T 3qfm_A 65 L---PITARVLGNWEDSLW------HGVRKELDSTRP-----SQRYLL----R-----QCQYVLEEISLEEIEVLHNQPL 121 (270)
T ss_dssp S---CEEEECCCHHHHHHH------HHHTTCSCTTSH-----HHHHHH----H-----HHHHHHTTSCHHHHHHHHSCCS
T ss_pred c---CCEEEEcCChHHHHH------HhhccccCCCcH-----HHHHHH----H-----HHHHHHHHcCHHHHHHHHhCCC
Confidence 2 378999999997421 000011111000 000000 0 0000111245789999886433
Q ss_pred ccccCCCCEEEEEeCCCccccCCCcccchHHHHHHHHHHHHHcCCeEEEEcccccceeeeeccccCccCCCCcEEEEECC
Q 008312 367 NVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHQVHAYERSNRVYNYTLDPCGPVHITVGD 446 (570)
Q Consensus 367 ~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~~H~YeR~~pv~n~~~~~~g~vyiv~G~ 446 (570)
..........|++.|..+......... ...-.+.+..++.+.++|++|+|| +|...... ..+|..+|..|+
T Consensus 122 ~~~~~~~g~~i~lvHg~p~~~~~~~~~-~~~~~~~l~~~~~~~~~d~~i~GH-tH~~~~~~-------~~~~~~~iNpGS 192 (270)
T 3qfm_A 122 QIHRQFGDLTVGISHHLPDKNWGRELI-HTGKQEEFDRLVTHPPCDIAVYGH-IHQQLLRY-------GTGGQLIVNPGS 192 (270)
T ss_dssp EEEEEETTEEEEEESSBTTBSSSSTTS-TTCCHHHHHHTTTTTTCSEEECCS-SCSEEEEE-------CTTSCEEEEECC
T ss_pred ceEEEECCcEEEEEECCCCCCCCceec-CCCcHHHHHHHhcccCCCEEEECC-cCchHhee-------ccCCEEEEECCC
Confidence 321111224677778654432111000 001134566777788999999999 99543321 135788899999
Q ss_pred CCcc
Q 008312 447 GGNR 450 (570)
Q Consensus 447 gG~~ 450 (570)
.|..
T Consensus 193 vg~p 196 (270)
T 3qfm_A 193 IGQP 196 (270)
T ss_dssp SSSC
T ss_pred ccCC
Confidence 8874
No 20
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=99.06 E-value=8.1e-10 Score=116.66 Aligned_cols=189 Identities=19% Similarity=0.234 Sum_probs=101.2
Q ss_pred eEEEEEecCCCCCC----h---------HHHHHH----HHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCccc
Q 008312 209 SRIAIVGDVGLTYN----T---------TSTVSH----MISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHE 271 (570)
Q Consensus 209 ~rf~vigD~g~~~~----~---------~~~i~~----l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~c~~~~~~~~~~~e 271 (570)
+||++++|+|.+.. . ...+++ +.+.+||+||++||+++... . +.
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~-----~------------~~-- 61 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRN-----N------------PS-- 61 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSS-----S------------CC--
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCC-----C------------CC--
Confidence 58999999998754 1 123333 34569999999999983211 1 11
Q ss_pred chHHHHHHHHHhhhhhhccCCeEEeccCccccccccchhhhhhhcccCCCCCCCCCCCcceEEEE--eC-eEEEEEeecC
Q 008312 272 TYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFN--AG-GIHFLMLAAY 348 (570)
Q Consensus 272 ~Y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYSf~--~G-~v~fI~Ldt~ 348 (570)
...+..+.+.++.+...+|+++++||||.... ..+..+... ++.+..-.....-+.+. .| .+.|+.+.-.
T Consensus 62 --~~~~~~~~~~l~~l~~~~~v~~i~GNHD~~~~---~~~~~~~~~--~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~ 134 (379)
T 3tho_B 62 --VVALHDLLDYLKRMMRTAPVVVLPGNQDWKGL---KLFGNFVTS--ISSDITFVMSFEPVDVEAKRGQKVRILPFPYP 134 (379)
T ss_dssp --HHHHHHHHHHHHHHHHHSCEEECCCTTSCTTH---HHHHHHHHT--TCSSEEECCSSCCEEEECTTCCEEEEEEECCC
T ss_pred --HHHHHHHHHHHHHHHhCCCEEEEcCCCccccC---ccccccccc--cCCcceeecccceEEEEcCCCCEEEEEECCCC
Confidence 12334555666666434999999999996421 111111111 11110000000112232 24 4777776432
Q ss_pred cCCC----CCHHHHHHHHHHHhccc---cCCCCEEEEEeCCCccccCCCcccchHH-HHHHHHHHHHHcCCeEEEEcccc
Q 008312 349 VSFD----KSGDQYKWLEEDLANVE---REVTPWLVATWHAPWYSTYKAHYREAEC-MRVAMEDLLYKYGVDVVFNGHQV 420 (570)
Q Consensus 349 ~~~~----~~~~Q~~WLe~~L~~~~---r~~~pwiIV~~H~P~y~s~~~~~~~~~~-~r~~l~~ll~~y~VdlvlsGH~~ 420 (570)
.... ....+.+|+.+.|++.- .....+.|+++|.+...... +.+.+. +...+...+...++|+++.|| .
T Consensus 135 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~I~l~H~~v~g~~~--~~~se~~~~~~v~~~~~~~~~dyvalGH-~ 211 (379)
T 3tho_B 135 DESEALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAG--YAGIEQGREIIINRALIPSVVDYAALGH-I 211 (379)
T ss_dssp CCC----CHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEEESCBSCCCC---------CSCCBCGGGSCTTSSEEEEES-C
T ss_pred CHHHHhhhhccchHHHHHHHHHHHHHHhcCCCCCeEEEEeccccCCcc--CCCCccccccccCHHHcCcCCCEEEccc-c
Confidence 1111 13567899999987311 12345789999998764321 001110 001121222346899999999 9
Q ss_pred cceeee
Q 008312 421 HAYERS 426 (570)
Q Consensus 421 H~YeR~ 426 (570)
|..+..
T Consensus 212 H~~q~~ 217 (379)
T 3tho_B 212 HSFREI 217 (379)
T ss_dssp SSCEEE
T ss_pred cCCeEe
Confidence 998654
No 21
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=98.90 E-value=7.4e-09 Score=98.74 Aligned_cols=140 Identities=16% Similarity=0.155 Sum_probs=82.9
Q ss_pred eEEEEEecCCCCCC-hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCcccchHHHHHHHHHhhhhh
Q 008312 209 SRIAIVGDVGLTYN-TTSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPV 287 (570)
Q Consensus 209 ~rf~vigD~g~~~~-~~~~i~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~c~~~~~~~~~~~e~Y~~~wd~~~~~l~~l 287 (570)
+||+++||+|.... ....++.+.+.++|+|+++||++.. ...+.++.+
T Consensus 26 m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D~ii~~GDl~~~-------------------------------~~~~~l~~l 74 (190)
T 1s3l_A 26 MKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL-------------------------------FVIKEFENL 74 (190)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST-------------------------------HHHHHGGGC
T ss_pred eEEEEEeeCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCH-------------------------------HHHHHHHhc
Confidence 89999999995421 1234555556789999999999731 112233332
Q ss_pred hccCCeEEeccCccccccccchhhhhhhcccCCCCCCCCCCCcceEEEEeCeEEEEEeecCcCCCCCHHHHHHHHHHHhc
Q 008312 288 LSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFDKSGDQYKWLEEDLAN 367 (570)
Q Consensus 288 ~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYSf~~G~v~fI~Ldt~~~~~~~~~Q~~WLe~~L~~ 367 (570)
..|+++|+||||.... .+. ..+ .|.. .. .+ . .. ...
T Consensus 75 --~~~~~~V~GNhD~~~~----~~~---~~~-~~~~----~~-~l----------~--~~-----------------~~~ 110 (190)
T 1s3l_A 75 --NANIIATYGNNDGERC----KLK---EWL-KDIN----EE-NI----------I--DD-----------------FIS 110 (190)
T ss_dssp --SSEEEEECCTTCCCHH----HHH---HHH-HHHC----TT-CE----------E--ES-----------------EEE
T ss_pred --CCCEEEEeCCCcchHH----HHH---HHh-cccC----hh-hh----------c--cc-----------------ceE
Confidence 5799999999998531 111 111 0100 00 00 0 00 000
Q ss_pred cccCCCCEEEEEeCCCccccCCCcccchHHHHHHHHHHHHHc-CCeEEEEcccccceeeeeccccCccCCCCcEEEEECC
Q 008312 368 VEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKY-GVDVVFNGHQVHAYERSNRVYNYTLDPCGPVHITVGD 446 (570)
Q Consensus 368 ~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y-~VdlvlsGH~~H~YeR~~pv~n~~~~~~g~vyiv~G~ 446 (570)
.. ...+.|++.|.|.+. +.+.+.+. ++|++++|| +|..+... .+++.+|..|+
T Consensus 111 ~~--~~~~~ill~Hg~~~~---------------l~~~~~~~~~~d~vl~GH-tH~~~~~~--------~~~~~~iNpGs 164 (190)
T 1s3l_A 111 VE--IDDLKFFITHGHHQS---------------VLEMAIKSGLYDVVIYGH-THERVFEE--------VDDVLVINPGE 164 (190)
T ss_dssp EE--ETTEEEEEEESCCHH---------------HHHHHHHHSCCSEEEEEC-SSCCEEEE--------ETTEEEEECCC
T ss_pred Ee--eCCcEEEEECCChHH---------------HHHHHHhcCCCCEEEECC-CCCcceEE--------ECCEEEEECCc
Confidence 11 123578888988653 23455565 999999999 99766542 24677887888
Q ss_pred CCc
Q 008312 447 GGN 449 (570)
Q Consensus 447 gG~ 449 (570)
.|.
T Consensus 165 ~~~ 167 (190)
T 1s3l_A 165 CCG 167 (190)
T ss_dssp SSC
T ss_pred ccc
Confidence 765
No 22
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=98.86 E-value=5.5e-09 Score=99.62 Aligned_cols=47 Identities=19% Similarity=0.289 Sum_probs=35.4
Q ss_pred EEEEEeCCCccccCCCcccchHHHHHHHHHHHHHcCCeEEEEcccccceee
Q 008312 375 WLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHQVHAYER 425 (570)
Q Consensus 375 wiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~~H~YeR 425 (570)
+.|++.|.|++......+. ...+.+.+++.+++++++++|| +|....
T Consensus 107 ~~i~~~H~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~vi~GH-tH~~~~ 153 (195)
T 1xm7_A 107 KRILLSHYPAKDPITERYP---DRQEMVREIYFKENCDLLIHGH-VHWNRE 153 (195)
T ss_dssp EEEEEESSCSSCSSCCSCH---HHHHHHHHHHHHTTCSEEEECC-CCCCSC
T ss_pred cEEEEEccCCcCCCccccc---chHHHHHHHHHHcCCcEEEECC-cCCCCc
Confidence 5788899998765433222 2357888899999999999999 997654
No 23
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=98.85 E-value=6.8e-08 Score=91.06 Aligned_cols=62 Identities=15% Similarity=0.182 Sum_probs=42.2
Q ss_pred CeEEEEEecCCCCCC---hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCcccchHHHHHHHHHhh
Q 008312 208 PSRIAIVGDVGLTYN---TTSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYM 284 (570)
Q Consensus 208 ~~rf~vigD~g~~~~---~~~~i~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~c~~~~~~~~~~~e~Y~~~wd~~~~~l 284 (570)
-+||+++||+|...+ ..+.++++. .++|+|+++||++.. ...+.+
T Consensus 22 mmri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D~ii~~GD~~~~-------------------------------~~~~~l 69 (178)
T 2kkn_A 22 VKRFLLISDSHVPVRMASLPDEILNSL-KEYDGVIGLGDYVDL-------------------------------DTVILL 69 (178)
T ss_dssp CEEEEEECCCCBTTTTCCCCHHHHHGG-GGCSEEEESSCBSCH-------------------------------HHHHHH
T ss_pred ceEEEEEecccCCCCHHHHHHHHHHHh-cCCCEEEECCCCCCH-------------------------------HHHHHH
Confidence 379999999995222 234455444 689999999999841 112223
Q ss_pred hhhhccCCeEEeccCcccc
Q 008312 285 QPVLSKVPIMVVEGNHEYE 303 (570)
Q Consensus 285 ~~l~~~iP~~~v~GNHD~~ 303 (570)
+.+ ..|+++|+||||..
T Consensus 70 ~~~--~~~v~~V~GNhD~~ 86 (178)
T 2kkn_A 70 EKF--SKEFYGVHGNMDYP 86 (178)
T ss_dssp HHH--TSSEEECCCSSSCG
T ss_pred Hhc--CCCEEEEECCCCcH
Confidence 333 26899999999974
No 24
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=98.81 E-value=8.3e-09 Score=102.10 Aligned_cols=151 Identities=20% Similarity=0.235 Sum_probs=81.3
Q ss_pred CeEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCcccchHHHHHHHHHhhhh
Q 008312 208 PSRIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQP 286 (570)
Q Consensus 208 ~~rf~vigD~g~~~~~-~~~i~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~c~~~~~~~~~~~e~Y~~~wd~~~~~l~~ 286 (570)
.+||+++||+|..... ...++.+. ++|.++++||++.. |.. . .+..+.+..
T Consensus 3 ~mri~~isDiHg~~~~l~~~l~~~~--~~d~ii~~GDl~~~------g~~------------------~--~~~~~~l~~ 54 (246)
T 3rqz_A 3 AMRILIISDVHANLVALEAVLSDAG--RVDDIWSLGDIVGY------GPR------------------P--RECVELVRV 54 (246)
T ss_dssp CCCEEEECCCTTCHHHHHHHHHHHC--SCSEEEECSCCSSS------SSC------------------H--HHHHHHHHH
T ss_pred CcEEEEEeecCCCHHHHHHHHHhcc--CCCEEEECCCcCCC------CCC------------------H--HHHHHHHHh
Confidence 5799999999954221 12233322 89999999999942 210 0 122333333
Q ss_pred hhccCCeEEeccCccccccccchhhhhhhcccCCCCCCCCCCCcceEEEEeCeEEEEEeecCcCCCCCHHHHHHHHHHHh
Q 008312 287 VLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFDKSGDQYKWLEEDLA 366 (570)
Q Consensus 287 l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYSf~~G~v~fI~Ldt~~~~~~~~~Q~~WLe~~L~ 366 (570)
+ ..++.+.||||..... .+.... +.... .. .+ .+..-....++.+||++...
T Consensus 55 ~---~~~~~v~GNhD~~~~~----------~~~~~~------------~~~~~-~~-~~-~~~~~~l~~~~~~~L~~lp~ 106 (246)
T 3rqz_A 55 L---APNISVIGNHDWACIG----------RLSLDE------------FNPVA-RF-AS-YWTTMQLQAEHLQYLESLPN 106 (246)
T ss_dssp H---CSSEECCCHHHHHHTC----------CCCCC--------------CGGG-GC-HH-HHHHHHCCHHHHHHHHHCCS
T ss_pred c---CCCEEEeCchHHHHhc----------cCCccc------------cCHHH-HH-HH-HHHHHHcCHHHHHHHHhCCc
Confidence 2 2368999999974211 000000 00000 00 00 00001135788999986543
Q ss_pred ccccCCCCEEEEEeCCCccccCCCcccchHHHHHHHHHHHHHcCCeEEEEcccccce
Q 008312 367 NVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHQVHAY 423 (570)
Q Consensus 367 ~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~~H~Y 423 (570)
.... . .|++.|.++...... +... ...+.++|.++++|++|+|| +|..
T Consensus 107 ~~~~-~---~i~~~Hg~p~~~~~~-~~~~---~~~~~~~l~~~~~~l~i~GH-tH~p 154 (246)
T 3rqz_A 107 RMID-G---DWTVVHGSPRHPIWE-YIYN---ARIAALNFPAFDTPLCFVGH-THVP 154 (246)
T ss_dssp EEEE-T---TEEEESSCSSSTTTC-CCCS---HHHHHHHGGGCCSSEEECCS-SSSE
T ss_pred EEEE-C---CEEEEECCcCCcccc-ccCC---hHHHHHHHhccCCCEEEECC-cCcc
Confidence 3322 2 366678766543211 1111 24566788999999999999 9964
No 25
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=98.78 E-value=1.9e-08 Score=104.01 Aligned_cols=73 Identities=22% Similarity=0.391 Sum_probs=50.3
Q ss_pred eEEEEEecCCCCCCh--------------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCcccchH
Q 008312 209 SRIAIVGDVGLTYNT--------------TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQ 274 (570)
Q Consensus 209 ~rf~vigD~g~~~~~--------------~~~i~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~c~~~~~~~~~~~e~Y~ 274 (570)
+||++++|+|.+... ...++.+.+.+||+||++||++... . +. .
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~------~------------~~----~ 58 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSS------R------------PS----P 58 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSS------S------------CC----H
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCC------C------------CC----H
Confidence 589999999987531 1234444567999999999998531 1 11 1
Q ss_pred HHHHHHHHhhhhhh-ccCCeEEeccCcccc
Q 008312 275 PRWDYWGRYMQPVL-SKVPIMVVEGNHEYE 303 (570)
Q Consensus 275 ~~wd~~~~~l~~l~-~~iP~~~v~GNHD~~ 303 (570)
..+..+.+.++.+. ..+|+++++||||..
T Consensus 59 ~~~~~~~~~l~~l~~~~~~v~~v~GNHD~~ 88 (333)
T 1ii7_A 59 GTLKKAIALLQIPKEHSIPVFAIEGNHDRT 88 (333)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEECCTTTCC
T ss_pred HHHHHHHHHHHHHHHCCCcEEEeCCcCCCc
Confidence 23345556666664 368999999999986
No 26
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=98.78 E-value=1.9e-07 Score=99.21 Aligned_cols=41 Identities=27% Similarity=0.333 Sum_probs=31.4
Q ss_pred CCeEEEEEecCCCCCC---------h----HHHHHHHHhCCCCEEEEcCCcccc
Q 008312 207 YPSRIAIVGDVGLTYN---------T----TSTVSHMISNRPDLILLVGDVTYA 247 (570)
Q Consensus 207 ~~~rf~vigD~g~~~~---------~----~~~i~~l~~~~pDfvl~~GDl~Y~ 247 (570)
..+||++++|+|.+.. . ...++.+.+.+||+||++||++..
T Consensus 12 ~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~ 65 (417)
T 4fbw_A 12 NTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHD 65 (417)
T ss_dssp TCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSS
T ss_pred CCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCccccC
Confidence 4799999999998743 1 224455556899999999999853
No 27
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=98.75 E-value=1.1e-06 Score=93.83 Aligned_cols=41 Identities=24% Similarity=0.319 Sum_probs=31.2
Q ss_pred CCeEEEEEecCCCCCCh-------------HHHHHHHHhCCCCEEEEcCCcccc
Q 008312 207 YPSRIAIVGDVGLTYNT-------------TSTVSHMISNRPDLILLVGDVTYA 247 (570)
Q Consensus 207 ~~~rf~vigD~g~~~~~-------------~~~i~~l~~~~pDfvl~~GDl~Y~ 247 (570)
..+||++++|+|.+... ...++.+.+.+||+||++||++..
T Consensus 31 ~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~ 84 (431)
T 3t1i_A 31 NTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHE 84 (431)
T ss_dssp GEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSS
T ss_pred CCEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCccccC
Confidence 47999999999987421 223445556899999999999853
No 28
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=98.66 E-value=1e-06 Score=94.60 Aligned_cols=41 Identities=27% Similarity=0.320 Sum_probs=31.6
Q ss_pred CCeEEEEEecCCCCCCh-------------HHHHHHHHhCCCCEEEEcCCcccc
Q 008312 207 YPSRIAIVGDVGLTYNT-------------TSTVSHMISNRPDLILLVGDVTYA 247 (570)
Q Consensus 207 ~~~rf~vigD~g~~~~~-------------~~~i~~l~~~~pDfvl~~GDl~Y~ 247 (570)
..+||++++|+|.+... ...++.+.+.+||+||++||++..
T Consensus 75 ~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~ 128 (472)
T 4fbk_A 75 NTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHD 128 (472)
T ss_dssp TCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSS
T ss_pred CCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCccccC
Confidence 37999999999987431 234555567899999999999853
No 29
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=98.46 E-value=7.6e-07 Score=98.46 Aligned_cols=174 Identities=18% Similarity=0.188 Sum_probs=93.7
Q ss_pred CCeEEEEEecCCCCCC------------------hHHHHHHHHhCCCC-EEEEcCCcccccccccCCCCCCcccccCCCC
Q 008312 207 YPSRIAIVGDVGLTYN------------------TTSTVSHMISNRPD-LILLVGDVTYANLYLTNGTGSDCYACSFANS 267 (570)
Q Consensus 207 ~~~rf~vigD~g~~~~------------------~~~~i~~l~~~~pD-fvl~~GDl~Y~d~~~~~G~~~~c~~~~~~~~ 267 (570)
..++|++++|+|.... ....++++.+.+|| +++.+||++....+
T Consensus 28 ~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~----------------- 90 (552)
T 2z1a_A 28 FTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLY----------------- 90 (552)
T ss_dssp CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHH-----------------
T ss_pred eeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHH-----------------
Confidence 3699999999996421 12345666666788 88999999853110
Q ss_pred CcccchHHHHHHHHHhhhhhhccCCeEEeccCccccccccchhhhhhhcccCCCCCC-----CC-----CCCcceEEEEe
Q 008312 268 PIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKE-----SG-----SLSKFYYSFNA 337 (570)
Q Consensus 268 ~~~e~Y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~-----~~-----~~~~~yYSf~~ 337 (570)
.. + .......+.|..+ -+-++++||||+... ...+..+.....+|--. .+ .....|.-++.
T Consensus 91 --~~-~-~~~~~~~~~ln~l---g~d~~~lGNHEfd~g--~~~l~~~l~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~ 161 (552)
T 2z1a_A 91 --FN-Q-YRGLADRYFMHRL---RYRAMALGNHEFDLG--PGPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVV 161 (552)
T ss_dssp --HH-H-HTTHHHHHHHHHT---TCCEEECCGGGGTTC--HHHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEE
T ss_pred --HH-H-hCCcHHHHHHHhc---CCCccccccccccCC--HHHHHHHHhhCCCCEEEEEEecCCCcccccccCCeEEEEE
Confidence 00 0 0112233344433 233678999999642 22333333333322110 00 01234667778
Q ss_pred Ce--EEEEEeecCcC-----------CCCCHHHHHHHHHHHhccccCCCCEEEEEeCCCccccCCCcccchHHHHHHHHH
Q 008312 338 GG--IHFLMLAAYVS-----------FDKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMED 404 (570)
Q Consensus 338 G~--v~fI~Ldt~~~-----------~~~~~~Q~~WLe~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ 404 (570)
++ +.||.+.+... +....++.+.+.+.|++ .+...+|++.|.|.... ..
T Consensus 162 ~G~kIgiiG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~~~d---------------~~ 223 (552)
T 2z1a_A 162 GGERVGIIGLTTPDTREISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGED---------------LK 223 (552)
T ss_dssp TTEEEEEEEEECTTHHHHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHHH---------------HH
T ss_pred CCEEEEEEEecccchhhccCCCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCcchH---------------HH
Confidence 76 55666654310 00112333333344543 24556899999885321 12
Q ss_pred HHHH-cCCeEEEEcccccceee
Q 008312 405 LLYK-YGVDVVFNGHQVHAYER 425 (570)
Q Consensus 405 ll~~-y~VdlvlsGH~~H~YeR 425 (570)
+..+ .+||++|+|| .|...-
T Consensus 224 la~~~~gvDlIlgGH-tH~~~~ 244 (552)
T 2z1a_A 224 LARRLVGVQVIVGGH-SHTLLG 244 (552)
T ss_dssp HHTTCSSCCEEEECS-SCCCBS
T ss_pred HHHhCCCccEEEeCC-cCcccc
Confidence 2233 5899999999 997553
No 30
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=98.38 E-value=7.8e-07 Score=97.52 Aligned_cols=184 Identities=18% Similarity=0.157 Sum_probs=92.4
Q ss_pred CCeEEEEEecCCCCCCh-----------HHHHHHHHhC----CC-CEEEEcCCcccccccccCCCCCCcccccCCCCCcc
Q 008312 207 YPSRIAIVGDVGLTYNT-----------TSTVSHMISN----RP-DLILLVGDVTYANLYLTNGTGSDCYACSFANSPIH 270 (570)
Q Consensus 207 ~~~rf~vigD~g~~~~~-----------~~~i~~l~~~----~p-Dfvl~~GDl~Y~d~~~~~G~~~~c~~~~~~~~~~~ 270 (570)
..++|++++|+|..... ...++++.+. ++ +++|.+||++.... ..
T Consensus 7 ~~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~-------------------~~ 67 (516)
T 1hp1_A 7 YKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVP-------------------ES 67 (516)
T ss_dssp EEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCH-------------------HH
T ss_pred eEEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcc-------------------hh
Confidence 46899999999975321 2334544432 46 69999999974211 00
Q ss_pred cchHHHHHHHHHhhhhhhccCCeEEeccCccccccccchhhhhhhcccCCCC---C----CCC-CCCcceEEEEeCe--E
Q 008312 271 ETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPS---K----ESG-SLSKFYYSFNAGG--I 340 (570)
Q Consensus 271 e~Y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~---~----~~~-~~~~~yYSf~~G~--v 340 (570)
+. ...+...+.|..+. +-++++||||+.... ..+..+.....+|- + ..+ .....|.-++.++ +
T Consensus 68 ~~--~~~~~~~~~ln~lg---~d~~~~GNHEfd~g~--~~l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kI 140 (516)
T 1hp1_A 68 DL--QDAEPDFRGMNLVG---YDAMAIGNHEFDNPL--TVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKI 140 (516)
T ss_dssp HT--TTTHHHHHHHHHHT---CCEEECCGGGGSSCH--HHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEE
T ss_pred hh--cCCcHHHHHHhccC---CCEEeeccccccCCH--HHHHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEE
Confidence 00 01122334444442 346789999995321 22222222222221 1 000 0123455677786 5
Q ss_pred EEEEeecCcC--CC-----------CCHH-HHHHHHHHHhccccCCCCEEEEEeCCCccccCCCc--ccchHHHHHHHHH
Q 008312 341 HFLMLAAYVS--FD-----------KSGD-QYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAH--YREAECMRVAMED 404 (570)
Q Consensus 341 ~fI~Ldt~~~--~~-----------~~~~-Q~~WLe~~L~~~~r~~~pwiIV~~H~P~y~s~~~~--~~~~~~~r~~l~~ 404 (570)
-||.+.+... +. ...+ -.+|++ .|++. .+...+|+++|.|........ .... ..+..
T Consensus 141 giiG~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~v~-~l~~~--~~~d~iI~l~H~g~~~~~~~~~~~~~~----~~la~ 213 (516)
T 1hp1_A 141 AVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQ-ELQQT--EKPDIIIAATHMGHYDNGEHGSNAPGD----VEMAR 213 (516)
T ss_dssp EEEEEECTTTTTSSSCCSCTTEEECCHHHHHHHHHH-HHHHH--TCCSEEEEEEESCCCGGGCCTTSCCCH----HHHHH
T ss_pred EEEEecccCcccccCcCccCCcEEeCHHHHHHHHHH-HHHhc--CCCCEEEEEecCCccCCCcccccCchH----HHHHH
Confidence 5666654321 11 0112 233333 24321 245679999999986432110 0111 12223
Q ss_pred HHHHcCCeEEEEccccccee
Q 008312 405 LLYKYGVDVVFNGHQVHAYE 424 (570)
Q Consensus 405 ll~~y~VdlvlsGH~~H~Ye 424 (570)
.+...+||++|+|| .|...
T Consensus 214 ~~~~~~iDlilgGH-tH~~~ 232 (516)
T 1hp1_A 214 ALPAGSLAMIVGGH-SQDPV 232 (516)
T ss_dssp HSCTTSSSEEECCS-SCCBC
T ss_pred hCCCCceeEEECCC-CCccc
Confidence 33334599999999 99753
No 31
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=98.26 E-value=2.5e-06 Score=82.25 Aligned_cols=75 Identities=16% Similarity=0.269 Sum_probs=46.2
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCcccchHHHHHHHHHhhhhh
Q 008312 209 SRIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPV 287 (570)
Q Consensus 209 ~rf~vigD~g~~~~~-~~~i~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~c~~~~~~~~~~~e~Y~~~wd~~~~~l~~l 287 (570)
+||+++||+|..... ...++.+.+.++|+|+++||++.. |.. ....+.|+ -....+.++.+
T Consensus 26 mki~~iSD~H~~~~~l~~~l~~~~~~~~d~vi~~GDl~~~------g~~----------~~~~~~~~--~~~~~~~l~~~ 87 (208)
T 1su1_A 26 MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNH------GPR----------NALPEGYA--PAKVVERLNEV 87 (208)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCC------CTT----------SCCCTTBC--HHHHHHHHHTT
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHHhcCCCEEEECCCcccc------Ccc----------cccccccC--HHHHHHHHHhc
Confidence 799999999975321 234444545689999999999953 110 01111111 12334444443
Q ss_pred hccCCeEEeccCcccc
Q 008312 288 LSKVPIMVVEGNHEYE 303 (570)
Q Consensus 288 ~~~iP~~~v~GNHD~~ 303 (570)
..|+++++||||..
T Consensus 88 --~~~v~~V~GNHD~~ 101 (208)
T 1su1_A 88 --AHKVIAVRGNCDSE 101 (208)
T ss_dssp --GGGEEECCCTTCCH
T ss_pred --CCceEEEECCCchH
Confidence 25899999999974
No 32
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=98.25 E-value=8.4e-06 Score=89.56 Aligned_cols=186 Identities=15% Similarity=0.167 Sum_probs=93.5
Q ss_pred CeEEEEEecCCCCCC-----------------hHHHHHHHHhCCCC-EEEEcCCcccccccccCCCCCCcccccCCCCCc
Q 008312 208 PSRIAIVGDVGLTYN-----------------TTSTVSHMISNRPD-LILLVGDVTYANLYLTNGTGSDCYACSFANSPI 269 (570)
Q Consensus 208 ~~rf~vigD~g~~~~-----------------~~~~i~~l~~~~pD-fvl~~GDl~Y~d~~~~~G~~~~c~~~~~~~~~~ 269 (570)
.++|++++|+|.... ....++++.+..++ ++|.+||++.... .
T Consensus 19 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~-------------------~ 79 (527)
T 3qfk_A 19 NIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSP-------------------F 79 (527)
T ss_dssp EEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSH-------------------H
T ss_pred cEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcH-------------------H
Confidence 699999999996531 12345566566676 7788999985311 1
Q ss_pred ccchHHH----HHHHHHhhhhhhccCCeEEeccCccccccccchhhhhhhcccCCCCCCC-----CC--CCcceEEEEeC
Q 008312 270 HETYQPR----WDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKES-----GS--LSKFYYSFNAG 338 (570)
Q Consensus 270 ~e~Y~~~----wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~-----~~--~~~~yYSf~~G 338 (570)
. .|-.. +....+.|..+ ... ++++||||+... ...+..+.....+|.-.. +. ....|.-++.+
T Consensus 80 ~-~~~~~~~~~~~~~~~~ln~l--g~D-~~t~GNHefd~G--~~~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~ 153 (527)
T 3qfk_A 80 C-NYLIAHSGSSQPLVDFYNRM--AFD-FGTLGNHEFNYG--LPYLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVG 153 (527)
T ss_dssp H-HHHHHTTCSSHHHHHHHHHT--CCC-EECCCGGGGTTC--HHHHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEET
T ss_pred H-HHHhhcccCcchHHHHHHhc--CCc-EEeccccccccC--HHHHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEEC
Confidence 0 00000 12233334433 233 567999998543 223333333333332110 10 11236667788
Q ss_pred e--EEEEEeecCc--CCCC--------CHHHHHHHHHHHhccccCCCCEEEEEeCCCccccCC-Cc-----ccchHHHHH
Q 008312 339 G--IHFLMLAAYV--SFDK--------SGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYK-AH-----YREAECMRV 400 (570)
Q Consensus 339 ~--v~fI~Ldt~~--~~~~--------~~~Q~~WLe~~L~~~~r~~~pwiIV~~H~P~y~s~~-~~-----~~~~~~~r~ 400 (570)
+ +-||.+.+.. .+.. -....+.+++.+++.. .+...+|+++|.+...... .. ..+..
T Consensus 154 G~kIgviG~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~---- 228 (527)
T 3qfk_A 154 DQTVGVIGLTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGENE---- 228 (527)
T ss_dssp TEEEEEEEEECTTGGGTSCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSCC----
T ss_pred CEEEEEEEeccCCcccccCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccchH----
Confidence 7 4556665431 1111 0122344444444433 3456799999987643210 00 11110
Q ss_pred HHHHHHHH--cCCeEEEEcccccceee
Q 008312 401 AMEDLLYK--YGVDVVFNGHQVHAYER 425 (570)
Q Consensus 401 ~l~~ll~~--y~VdlvlsGH~~H~YeR 425 (570)
...|.++ -+||++|+|| .|...-
T Consensus 229 -~~~la~~~~~giDlIlgGH-tH~~~~ 253 (527)
T 3qfk_A 229 -GYAMLEAFSKDIDIFITGH-QHRQIA 253 (527)
T ss_dssp -HHHHHHHHGGGCSEEECCS-SCCEEE
T ss_pred -HHHHHHhcCCCCcEEEECC-CCcccc
Confidence 1122322 4899999999 997553
No 33
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=98.22 E-value=2.5e-06 Score=94.13 Aligned_cols=176 Identities=18% Similarity=0.243 Sum_probs=92.0
Q ss_pred CCeEEEEEecCCCCCC------------------h---HHHHHHHHhCCC-CEEEEcCCcccccccccCCCCCCcccccC
Q 008312 207 YPSRIAIVGDVGLTYN------------------T---TSTVSHMISNRP-DLILLVGDVTYANLYLTNGTGSDCYACSF 264 (570)
Q Consensus 207 ~~~rf~vigD~g~~~~------------------~---~~~i~~l~~~~p-Dfvl~~GDl~Y~d~~~~~G~~~~c~~~~~ 264 (570)
..++|++++|+|.... . ...++++.+..| +++|.+||++....+
T Consensus 24 ~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~-------------- 89 (546)
T 4h2g_A 24 WELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIW-------------- 89 (546)
T ss_dssp EEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHH--------------
T ss_pred eEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchh--------------
Confidence 4799999999996421 1 224555555566 599999999953211
Q ss_pred CCCCcccchHHHHHHHHHhhhhhhccCCeEEeccCccccccccchhhh-hhhcccCCCCCCCC----C--------CCcc
Q 008312 265 ANSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFV-AYTSRFAFPSKESG----S--------LSKF 331 (570)
Q Consensus 265 ~~~~~~e~Y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~-~y~~~f~~P~~~~~----~--------~~~~ 331 (570)
... .......+.|..+ ... ++++||||+... ...+. .+.....+|--... . ....
T Consensus 90 -----~~~--~~g~~~~~~ln~l--g~d-~~~~GNHEfd~g--~~~l~~~~~~~~~~~~l~aNv~~~~~~~p~~~~~~~~ 157 (546)
T 4h2g_A 90 -----FTV--YKGAEVAHFMNAL--RYD-AMALGNHEFDNG--VEGLIEPLLKEAKFPILSANIKAKGPLASQISGLYLP 157 (546)
T ss_dssp -----HHH--HTTHHHHHHHHHH--TCS-EEECCGGGGTTH--HHHHHTTTTTTCSSCEECSSEEECHHHHHHHBTTBBS
T ss_pred -----hhh--hCChHHHHHHHhc--CCc-EEeccCcccccC--HHHHHHHHHhhcCCCEEEEEeecCCCCCccccccCCC
Confidence 000 0112233444443 233 578999999532 12222 33333333321100 0 1234
Q ss_pred eEEEEeCeEE--EEEeecCc--CC-CCC-----HHHHHHHHHHHhccccCCCCEEEEEeCCCccccCCCcccchHHHHHH
Q 008312 332 YYSFNAGGIH--FLMLAAYV--SF-DKS-----GDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVA 401 (570)
Q Consensus 332 yYSf~~G~v~--fI~Ldt~~--~~-~~~-----~~Q~~WLe~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~ 401 (570)
|.-++.++++ ||.+.+.. .+ ... ....+.+++.+++....+...+|++.|.+... . .
T Consensus 158 ~~i~~~~G~kIgiiG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~~~--------d----~- 224 (546)
T 4h2g_A 158 YKVLPVGDEVVGIVGYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEM--------D----K- 224 (546)
T ss_dssp EEEEEETTEEEEEEEEECTTHHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHHH--------H----H-
T ss_pred eEEEEECCEEEEEEEecccccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCccc--------h----H-
Confidence 6667788755 55554421 00 000 12234445544444333466799999987532 0 1
Q ss_pred HHHHHHH-cCCeEEEEccccccee
Q 008312 402 MEDLLYK-YGVDVVFNGHQVHAYE 424 (570)
Q Consensus 402 l~~ll~~-y~VdlvlsGH~~H~Ye 424 (570)
.+..+ -+||++|+|| .|...
T Consensus 225 --~la~~~~giDlIlgGH-tH~~~ 245 (546)
T 4h2g_A 225 --LIAQKVRGVDVVVGGH-SNTFL 245 (546)
T ss_dssp --HHHHHSTTCCEEECCS-SCCCC
T ss_pred --HHHHhCCCCcEEEeCC-cCccc
Confidence 12222 4799999999 99754
No 34
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=98.21 E-value=1e-05 Score=89.91 Aligned_cols=176 Identities=18% Similarity=0.181 Sum_probs=93.1
Q ss_pred CCeEEEEEecCCCCCCh----------------------HHHHHHHHhCCCC-EEEEcCCcccccccccCCCCCCccccc
Q 008312 207 YPSRIAIVGDVGLTYNT----------------------TSTVSHMISNRPD-LILLVGDVTYANLYLTNGTGSDCYACS 263 (570)
Q Consensus 207 ~~~rf~vigD~g~~~~~----------------------~~~i~~l~~~~pD-fvl~~GDl~Y~d~~~~~G~~~~c~~~~ 263 (570)
..++|++++|+|..... ...++++.+..++ ++|..||++....+.
T Consensus 11 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~------------ 78 (579)
T 3ztv_A 11 VELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYF------------ 78 (579)
T ss_dssp EEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHH------------
T ss_pred eEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceee------------
Confidence 46999999999954211 2245555555666 889999999532110
Q ss_pred CCCCCcccchHHHHHHHHHhhhhhhccCCeEEeccCccccccccchhhhhhhcccCCCCCC------CCC----CCcceE
Q 008312 264 FANSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKE------SGS----LSKFYY 333 (570)
Q Consensus 264 ~~~~~~~e~Y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~------~~~----~~~~yY 333 (570)
..+ ......+.|..+. +-++++||||+... ...+..+.....+|--. .+. .-..|.
T Consensus 79 -------~~~--~g~~~~~~ln~lg---~D~~tlGNHEfd~G--~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~ 144 (579)
T 3ztv_A 79 -------TLF--GGSADAAVMNAGN---FHYFTLGNHEFDAG--NEGLLKLLEPLKIPVLSANVIPDKSSILYNKWKPYD 144 (579)
T ss_dssp -------HTT--TTHHHHHHHHHHT---CSEEECCSGGGTTH--HHHHHHHHTTCCSCEECSSEEECTTSTTTTSCBSEE
T ss_pred -------eec--CCHHHHHHHHhcC---cCeeeccccccccC--HHHHHHHHHhcCCCeeeeeEeccCCcccccccCCeE
Confidence 000 1122334444432 23577999998532 23334444443333210 011 112456
Q ss_pred EEEeCe--EEEEEeec-C-----cCCCC---CHHHHHHHHHHHhccccCCCCEEEEEeCCCccccCCCcccchHHHHHHH
Q 008312 334 SFNAGG--IHFLMLAA-Y-----VSFDK---SGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAM 402 (570)
Q Consensus 334 Sf~~G~--v~fI~Ldt-~-----~~~~~---~~~Q~~WLe~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l 402 (570)
-++.++ +-||.+.+ . ..... -....+-+++.+++........+|+++|.+... . .
T Consensus 145 i~~~~G~kIgviG~t~~~~~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~~~--------d----~-- 210 (579)
T 3ztv_A 145 IFTVDGEKIAIIGLDTVNKTVNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGSEK--------N----I-- 210 (579)
T ss_dssp EEEETTEEEEEEEEECSHHHHHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCHHH--------H----H--
T ss_pred EEEECCEEEEEEEEEcCCccccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh--------h----H--
Confidence 677777 55666643 1 00000 012234455555544334456799999976422 0 1
Q ss_pred HHHHHH-cCCeEEEEccccccee
Q 008312 403 EDLLYK-YGVDVVFNGHQVHAYE 424 (570)
Q Consensus 403 ~~ll~~-y~VdlvlsGH~~H~Ye 424 (570)
.+..+ -+||++|+|| .|...
T Consensus 211 -~la~~~~giDlIlgGH-tH~~~ 231 (579)
T 3ztv_A 211 -EIAQKVNDIDVIVTGD-SHYLY 231 (579)
T ss_dssp -HHHHHCSSCCEEEECS-SCCEE
T ss_pred -HHHHhCCCCCEEEeCC-CCccc
Confidence 12222 3799999999 99765
No 35
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=98.13 E-value=1.9e-05 Score=87.47 Aligned_cols=144 Identities=19% Similarity=0.133 Sum_probs=73.8
Q ss_pred CC-EEEEcCCcccccccccCCCCCCcccccCCCCCcccchHHHHHHHHHhhhhhhccCCeEEeccCccccccccchhhhh
Q 008312 235 PD-LILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVA 313 (570)
Q Consensus 235 pD-fvl~~GDl~Y~d~~~~~G~~~~c~~~~~~~~~~~e~Y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~ 313 (570)
|| ++|.+||++..... . .+ .......+.|+.+ ..+++ + ||||+... ...+..
T Consensus 123 pd~Lll~~GD~~~gs~~-------------------~-~~-~~g~~~~~~ln~l--g~d~~-~-GNHEfd~G--~~~l~~ 175 (562)
T 2wdc_A 123 GKALVLDGGDTWTNSGL-------------------S-LL-TRGEAVVRWQNLV--GVDHM-V-SHWEWTLG--RERVEE 175 (562)
T ss_dssp CCEEEEECSCCSSSSHH-------------------H-HH-HTTHHHHHHHHHH--TCCEE-C-CSGGGGGC--HHHHHH
T ss_pred CCEEEEeCCCCCCcchh-------------------h-hh-hCCHHHHHHHHhh--CCcEE-e-cchhcccC--HHHHHH
Confidence 88 89999999953210 0 00 0112333445444 35655 6 99998532 223333
Q ss_pred hhcccCCCCCC-------CC-CCCcceEEEEeCe--EEEEEeecCc-------------CCCCCHHHHHHHHHHHhcccc
Q 008312 314 YTSRFAFPSKE-------SG-SLSKFYYSFNAGG--IHFLMLAAYV-------------SFDKSGDQYKWLEEDLANVER 370 (570)
Q Consensus 314 y~~~f~~P~~~-------~~-~~~~~yYSf~~G~--v~fI~Ldt~~-------------~~~~~~~Q~~WLe~~L~~~~r 370 (570)
+...+.+|--. .+ .....|.-++.++ +-||.+.+.. .+....+..+-+.+.|++
T Consensus 176 ~l~~~~~p~L~aNv~~~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--- 252 (562)
T 2wdc_A 176 LLGLFRGEFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARA--- 252 (562)
T ss_dssp HHHHCCSEECCSSCEETTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHHH---
T ss_pred HHHhCCCCEEEEEEEecCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHHHHH---
Confidence 33333333111 00 0122455677777 5555554321 111222333222233433
Q ss_pred CCCCEEEEEeCCCccccCCCcccchHHHHHHHHHHHHH-cCCeEEEEccccccee
Q 008312 371 EVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYK-YGVDVVFNGHQVHAYE 424 (570)
Q Consensus 371 ~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~-y~VdlvlsGH~~H~Ye 424 (570)
.+...+|++.|.|.... ..+..+ .+||++|+|| .|...
T Consensus 253 ~~~d~iIvLsH~g~~~d---------------~~la~~~~giDlIlgGH-tH~~~ 291 (562)
T 2wdc_A 253 EGANAVVLLSHNGMQLD---------------AALAERIRGIDLILSGH-THDLT 291 (562)
T ss_dssp TTCSEEEEEECSCHHHH---------------HHHHTTSSSCCEEEECS-SCCCC
T ss_pred CCCCEEEEEeCCCCcch---------------HHHHhcCCCCcEEEeCC-CCCCC
Confidence 34567999999885320 123333 4899999999 99754
No 36
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=98.11 E-value=1.7e-05 Score=86.68 Aligned_cols=187 Identities=18% Similarity=0.173 Sum_probs=92.0
Q ss_pred CeEEEEEecCCCCCC----------------h---HHHHHHHHhCCCCEEEE-cCCcccccccccCCCCCCcccccCCCC
Q 008312 208 PSRIAIVGDVGLTYN----------------T---TSTVSHMISNRPDLILL-VGDVTYANLYLTNGTGSDCYACSFANS 267 (570)
Q Consensus 208 ~~rf~vigD~g~~~~----------------~---~~~i~~l~~~~pDfvl~-~GDl~Y~d~~~~~G~~~~c~~~~~~~~ 267 (570)
.++|++++|+|.... . ...++++.+.+++.+++ +||++....+
T Consensus 6 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~~~----------------- 68 (509)
T 3ive_A 6 DVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYI----------------- 68 (509)
T ss_dssp EEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHH-----------------
T ss_pred EEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCchh-----------------
Confidence 689999999995421 1 22455555667887665 9999853111
Q ss_pred CcccchHHHHHHHHHhhhhhhccCCeEEeccCccccccccchhhhhhhcccCCCCC-------CCCC-C-CcceEEEEeC
Q 008312 268 PIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSK-------ESGS-L-SKFYYSFNAG 338 (570)
Q Consensus 268 ~~~e~Y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~-------~~~~-~-~~~yYSf~~G 338 (570)
... .......+.|..+ -+-++++||||+... ...+..+.....+|-- ..+. . ...|.-++.+
T Consensus 69 --~~~--~~g~~~~~~ln~l---g~D~~tlGNHEfd~G--~~~l~~~l~~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~ 139 (509)
T 3ive_A 69 --SSL--TKGKAIIDIMNTM---PFDAVTIGNHEFDHG--WDNTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKD 139 (509)
T ss_dssp --HHT--TTTHHHHHHHTTS---CCSEECCCGGGGTTC--HHHHHHHHTTCSSCBCCCSEEETTSCCBSSSCSEEEEEET
T ss_pred --hhh--cCChHHHHHHHhc---CCcEEeecccccccC--HHHHHHHHhhCCCCEEEEEEEECCCCCccCcCCeEEEEEC
Confidence 000 0112233444433 234677899998643 2223333333333321 0011 0 2345667788
Q ss_pred e--EEEEEeecC-----cCC---CC---CHHHHHHHHHHHhccccCCCCEEEEEeCCCccccCCCcccchHH--HHHHHH
Q 008312 339 G--IHFLMLAAY-----VSF---DK---SGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAEC--MRVAME 403 (570)
Q Consensus 339 ~--v~fI~Ldt~-----~~~---~~---~~~Q~~WLe~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~--~r~~l~ 403 (570)
+ +-||.+-+. ... .. -....+.+++.+++.... ...+|+++|.+.-...... ...+. ....-.
T Consensus 140 G~kIgiiG~t~~~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~Lk~~-~D~iIvl~H~G~~~~~~~~-~~~~~~~~~~~d~ 217 (509)
T 3ive_A 140 GVKIGVIGLHGVFAFNDTVSAATRVGIEARDEIKWLQRYIDELKGK-VDLTVALIHEGVPARQSSM-GGTDVRRALDKDI 217 (509)
T ss_dssp TEEEEEEEEECHHHHHHHSCGGGCTTEEECCHHHHHHHHHHHHTTT-CSEEEEEEECSSCCCCCCC----CCCCCCHHHH
T ss_pred CEEEEEEecccCcccccccccccCCCCEEcCHHHHHHHHHHHHHhc-CCEEEEEeccCcCCccccc-cccccccccchHH
Confidence 7 455555321 000 00 122334455555544333 6779999998753221110 00000 000011
Q ss_pred HHHHH-cCCeEEEEcccccce
Q 008312 404 DLLYK-YGVDVVFNGHQVHAY 423 (570)
Q Consensus 404 ~ll~~-y~VdlvlsGH~~H~Y 423 (570)
.+.++ -+||++|+|| .|..
T Consensus 218 ~la~~~~giDlIlgGH-tH~~ 237 (509)
T 3ive_A 218 QTASQVKGLDILITGH-AHVG 237 (509)
T ss_dssp HHHHHCSSCCEEEEES-SCCC
T ss_pred HHHhcCCCCcEEEeCC-cCcc
Confidence 23333 3799999999 9963
No 37
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=98.00 E-value=0.00025 Score=78.31 Aligned_cols=194 Identities=18% Similarity=0.180 Sum_probs=95.3
Q ss_pred EEcCCCCCCCCCCeEEEEEecCCCCCC--------------hHHHH---HHHH-hCCCC-EEEEcCCcccccccccCCCC
Q 008312 196 FRTMPDSSSTSYPSRIAIVGDVGLTYN--------------TTSTV---SHMI-SNRPD-LILLVGDVTYANLYLTNGTG 256 (570)
Q Consensus 196 F~T~p~~~~~~~~~rf~vigD~g~~~~--------------~~~~i---~~l~-~~~pD-fvl~~GDl~Y~d~~~~~G~~ 256 (570)
|-++|........++|++++|+|.... ....+ +++. +.+++ ++|.+||++....+.+
T Consensus 3 ~~s~p~~~~~~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~---- 78 (557)
T 3c9f_A 3 LASFPHRNLTWNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSD---- 78 (557)
T ss_dssp --CCCBCCCCCCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHH----
T ss_pred cccCCCCCCCceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchh----
Confidence 445565554556899999999997521 11222 2222 25788 5799999995322110
Q ss_pred CCcccccCCCCCcccchHHHHHHHHHhhhhhhccCCeEEeccCccccccccc-hhhhhhhcccCCCC---C-----CCCC
Q 008312 257 SDCYACSFANSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAEN-RTFVAYTSRFAFPS---K-----ESGS 327 (570)
Q Consensus 257 ~~c~~~~~~~~~~~e~Y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~-~~~~~y~~~f~~P~---~-----~~~~ 327 (570)
.+..+.....+.|..+ .+- ++++||||+...... ..+........+|. + +.+.
T Consensus 79 ---------------~~~~~g~~~~~~ln~l--g~D-a~tlGNHEfD~G~~~l~~~~~~l~~a~fp~L~ANv~~~~~~g~ 140 (557)
T 3c9f_A 79 ---------------ITSPNGLKSTPIFIKQ--DYD-LLTIGNHELYLWENSKQEYETVVNHFQDKYVCSNVDIRLDNGL 140 (557)
T ss_dssp ---------------SSSSTTTTTHHHHTTS--CCS-EECCCGGGSSSHHHHHHHHHHHHHHTTTTBBCSSEEEECTTSC
T ss_pred ---------------hcccCCHHHHHHHHhc--CCC-EEeecchhcccchHHHHHHHHHHHhCCCCEEEeecccccccCC
Confidence 0000011112333333 233 567899999643210 12222222232332 1 1111
Q ss_pred ---CCcceEEEEe--CeE--EEEEeecCcCCC------CCHHH---HHHHHHHHhccccCCCCEEEEEeCCCccccCCCc
Q 008312 328 ---LSKFYYSFNA--GGI--HFLMLAAYVSFD------KSGDQ---YKWLEEDLANVEREVTPWLVATWHAPWYSTYKAH 391 (570)
Q Consensus 328 ---~~~~yYSf~~--G~v--~fI~Ldt~~~~~------~~~~Q---~~WLe~~L~~~~r~~~pwiIV~~H~P~y~s~~~~ 391 (570)
....|.-++. +++ -||.+.+...-. ....+ .+|+++.++ .+...+|+++|.+.....
T Consensus 141 ~~~~~~py~I~e~~~~G~kIgiiGlt~~~~~~~~~~~~~d~~e~i~~~~v~~l~~----~~~D~IIvL~H~G~~~~~--- 213 (557)
T 3c9f_A 141 FVPLGLKYKYFTTPIRGIRVMAFGFLFDFKRFNSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHNW--- 213 (557)
T ss_dssp EEESSBSCEEEECTTTCCEEEEEECCCCCCCCCTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTTT---
T ss_pred ccccCCCeEEEEEccCCEEEEEEEeecCCCCCCCCcEECCHHHHHHHHHHHHHHh----cCCCEEEEecccCccccC---
Confidence 1234566777 764 455554421100 01112 146665442 356779999998863111
Q ss_pred ccchHHHHHHHHHHHHH--cCCeE-EEEccccccee
Q 008312 392 YREAECMRVAMEDLLYK--YGVDV-VFNGHQVHAYE 424 (570)
Q Consensus 392 ~~~~~~~r~~l~~ll~~--y~Vdl-vlsGH~~H~Ye 424 (570)
.+ . ......+.+ .+||+ +|.|| .|...
T Consensus 214 -d~--~--~~~~~~lA~~~~giDilIlgGH-tH~~~ 243 (557)
T 3c9f_A 214 -GE--F--YQVHQYLRQFFPDTIIQYFGGH-SHIRD 243 (557)
T ss_dssp -CH--H--HHHHHHHHHHCTTSEEEEEECS-SCCEE
T ss_pred -cc--c--cHHHHHHHHhCCCCCEEEECCC-CCCCC
Confidence 11 1 122222333 58995 99999 99873
No 38
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=97.99 E-value=3.3e-06 Score=81.85 Aligned_cols=39 Identities=28% Similarity=0.419 Sum_probs=26.5
Q ss_pred CeEEEEEecCCCCCCh-HHHHHHHHh-CCCCEEEEcCCccc
Q 008312 208 PSRIAIVGDVGLTYNT-TSTVSHMIS-NRPDLILLVGDVTY 246 (570)
Q Consensus 208 ~~rf~vigD~g~~~~~-~~~i~~l~~-~~pDfvl~~GDl~Y 246 (570)
..|++++||+|..... ...++.+.. .++|.+|++||++.
T Consensus 12 ~~~i~visDiHg~~~~l~~~l~~~~~~~~~d~~i~~GD~~~ 52 (221)
T 1g5b_A 12 YRNIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVD 52 (221)
T ss_dssp CSCEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSS
T ss_pred CceEEEEEcCCCCHHHHHHHHHHccCCCCCCEEEEeCCccC
Confidence 4689999999964221 123333322 26899999999995
No 39
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=97.95 E-value=9.8e-05 Score=74.30 Aligned_cols=190 Identities=18% Similarity=0.229 Sum_probs=99.0
Q ss_pred CeEEEEEecCCCCCChH---HHHHHHHhC-CCCEEEEcCCcccccccccCCCCCCcccccCCCCCcccchHHHHHHHHHh
Q 008312 208 PSRIAIVGDVGLTYNTT---STVSHMISN-RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRY 283 (570)
Q Consensus 208 ~~rf~vigD~g~~~~~~---~~i~~l~~~-~pDfvl~~GDl~Y~d~~~~~G~~~~c~~~~~~~~~~~e~Y~~~wd~~~~~ 283 (570)
.+||+++||.+...... ..+.++.+. ++|+++..||.+.. |.. +. ....+.
T Consensus 4 ~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d~vi~Ngen~~g------G~g------------~~-------~~~~~~ 58 (281)
T 1t71_A 4 SIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTH------GKG------------LS-------LKHYEF 58 (281)
T ss_dssp CCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTT------TSS------------CC-------HHHHHH
T ss_pred eEEEEEECCcCChHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCC------CCC------------cC-------HHHHHH
Confidence 58999999998542211 234555443 68999999998853 221 11 112223
Q ss_pred hhhhhccCCeEEeccCccccccccchhhhhhhcc--c----CCCCCCCCC-CCcceEEEEeCe--EEEEEeecCcCCCC-
Q 008312 284 MQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSR--F----AFPSKESGS-LSKFYYSFNAGG--IHFLMLAAYVSFDK- 353 (570)
Q Consensus 284 l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~--f----~~P~~~~~~-~~~~yYSf~~G~--v~fI~Ldt~~~~~~- 353 (570)
|..+ .+- .++.||||+.... ..+ .|... . ++|...... .+.-|.-++.++ +-+|.|-+...+..
T Consensus 59 ln~~--G~D-a~TlGNHefD~g~--~~~-~~l~~~~~v~~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~ 132 (281)
T 1t71_A 59 LKEA--GVN-YITMGNHTWFQKL--DLA-VVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPF 132 (281)
T ss_dssp HHHH--TCC-EEECCTTTTCCGG--GHH-HHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSS
T ss_pred HHhc--CCC-EEEEccCcccCCc--cHH-HHhhhcCEEeeccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCc
Confidence 3332 233 4567999997541 111 12221 1 223211000 234567788876 45555544431321
Q ss_pred -CHHHHHHHHHHHhccccCCCCEEEEEeCCCccccCCCcccchHHHHHHHHHHHHHcCCeEEEEcccccceeeeeccccC
Q 008312 354 -SGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHQVHAYERSNRVYNY 432 (570)
Q Consensus 354 -~~~Q~~WLe~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~~H~YeR~~pv~n~ 432 (570)
-..-.+.+++.++ +.+++.+||.+|.-. ..+ .+.+.. ...-+||+++.|| .|...-...
T Consensus 133 ~~~~pf~~a~~~v~---~~~~diIIv~~H~g~---------t~E--k~~la~-~~dg~VD~VvGgH-THv~t~d~~---- 192 (281)
T 1t71_A 133 KTTNPFKVLKELIL---KRDCDLHIVDFHAET---------TSE--KNAFCM-AFDGYVTTIFGTH-THVPSADLR---- 192 (281)
T ss_dssp CBCCHHHHHHHHHT---TCCCSEEEEEEECSC---------HHH--HHHHHH-HHTTTSSEEEEES-SSSCCTTCE----
T ss_pred cccCHHHHHHHHHh---hcCCCEEEEEeCCCc---------hHH--HHHHHH-hCCCCeEEEEeCC-CCcCCCceE----
Confidence 1222344555555 346778999999421 011 112222 2234699999999 997543211
Q ss_pred ccCCCCcEEEEE-CCCCc
Q 008312 433 TLDPCGPVHITV-GDGGN 449 (570)
Q Consensus 433 ~~~~~g~vyiv~-G~gG~ 449 (570)
+-++|+.||+. |..|.
T Consensus 193 -il~~gt~~i~d~G~~G~ 209 (281)
T 1t71_A 193 -ITPKGSAYITDVGMCGP 209 (281)
T ss_dssp -ECTTSCEEESCCCEEBC
T ss_pred -EecCCcEEEecCccccC
Confidence 12478888862 44444
No 40
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=97.78 E-value=0.00032 Score=69.36 Aligned_cols=188 Identities=21% Similarity=0.301 Sum_probs=96.6
Q ss_pred eEEEEEecCCCCCCh---HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCcccchHHHHHHHHHhhh
Q 008312 209 SRIAIVGDVGLTYNT---TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQ 285 (570)
Q Consensus 209 ~rf~vigD~g~~~~~---~~~i~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~c~~~~~~~~~~~e~Y~~~wd~~~~~l~ 285 (570)
+||+++||.=..... ...+.++.+.. |++|..|..+.. |.. +. ....+.|.
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~~-d~vi~ngen~~~------G~g------------~~-------~~~~~~l~ 54 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDRY-DLVIANGENAAR------GKG------------LD-------RRSYRLLR 54 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGGC-SEEEEECTTTTT------TSS------------CC-------HHHHHHHH
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHHhhC-CEEEEeCCCccC------CCC------------cC-------HHHHHHHH
Confidence 589999997432211 23455555556 998887776642 331 11 11222333
Q ss_pred hhhccCCeEEeccCccccccccchhhhhhhccc--CCCCCC-CCCCCcceEEEEeCeEEEEEee--cCcCCCCCHHHHHH
Q 008312 286 PVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRF--AFPSKE-SGSLSKFYYSFNAGGIHFLMLA--AYVSFDKSGDQYKW 360 (570)
Q Consensus 286 ~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f--~~P~~~-~~~~~~~yYSf~~G~v~fI~Ld--t~~~~~~~~~Q~~W 360 (570)
.+ .+-.+ +.||||++.. ....|.... -.|.+- .+.....|.-++.++.++-+++ +......-..-.+-
T Consensus 55 ~~--G~D~~-T~GNHefD~~----~l~~~l~~~~~vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~ 127 (252)
T 2z06_A 55 EA--GVDLV-SLGNHAWDHK----EVYALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRA 127 (252)
T ss_dssp HH--TCCEE-ECCTTTTSCT----THHHHHHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHH
T ss_pred hC--CCCEE-EeccEeeECc----hHHHHhccCCceEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHH
Confidence 32 34444 6799999753 122222211 112221 1122456777888876655554 33211111112333
Q ss_pred HHHHHhccccCCCCEEEEEeCCCccccCCCcccchHHHHHHHHHHHHHcCCeEEEEcccccceeeeeccccCccCCCCcE
Q 008312 361 LEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHQVHAYERSNRVYNYTLDPCGPV 440 (570)
Q Consensus 361 Le~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~~H~YeR~~pv~n~~~~~~g~v 440 (570)
+++.+++.. ++.+||.+|.=.. .+ .+.+. .+..-+||+++.|| +|...-. ..+-++|+.
T Consensus 128 ~~~~v~~lk---~d~IIv~~H~g~t---------se--k~~la-~~~dg~Vd~VvGgH-THv~t~d-----~~il~~gt~ 186 (252)
T 2z06_A 128 LDRLLEEEK---ADYVLVEVHAEAT---------SE--KMALA-HYLDGRASAVLGTH-THVPTLD-----ATRLPKGTL 186 (252)
T ss_dssp HHHHHHHCC---CSEEEEEEECSCH---------HH--HHHHH-HHHBTTBSEEEEES-SCSCBSC-----CEECTTSCE
T ss_pred HHHHHHHhC---CCEEEEEeCCCcH---------HH--HHHHH-HhCCCCeEEEEcCC-CCcCCCc-----cEEcCCCcE
Confidence 555555543 6679999994211 11 11121 22334699999999 9974332 122357889
Q ss_pred EEE-ECCCCcc
Q 008312 441 HIT-VGDGGNR 450 (570)
Q Consensus 441 yiv-~G~gG~~ 450 (570)
||+ .|..|..
T Consensus 187 ~itd~G~~G~y 197 (252)
T 2z06_A 187 YQTDVGMTGTY 197 (252)
T ss_dssp EESCCCCBEES
T ss_pred eecCCcccccC
Confidence 886 3555553
No 41
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=97.68 E-value=0.00054 Score=67.91 Aligned_cols=188 Identities=18% Similarity=0.203 Sum_probs=96.2
Q ss_pred eEEEEEecCCCCCCh---HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCcccchHHHHHHHHHhhh
Q 008312 209 SRIAIVGDVGLTYNT---TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQ 285 (570)
Q Consensus 209 ~rf~vigD~g~~~~~---~~~i~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~c~~~~~~~~~~~e~Y~~~wd~~~~~l~ 285 (570)
+||+++||.=..... ...+.++.+.. |++|..|+.+.. |.. +. ....+.|.
T Consensus 1 m~ilf~GDv~g~~G~~~~~~~l~~lr~~~-d~vi~nge~~~~------G~g------------~~-------~~~~~~l~ 54 (255)
T 1t70_A 1 MRVLFIGDVFGQPGRRVLQNHLPTIRPQF-DFVIVNMENSAG------GFG------------MH-------RDAARGAL 54 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHHGGGC-SEEEEECTBTTT------TSS------------CC-------HHHHHHHH
T ss_pred CEEEEEeccCChHHHHHHHHHHHHHHhhC-CEEEECCCCccC------CcC------------CC-------HHHHHHHH
Confidence 589999997422111 22345555555 999988888742 321 11 11122233
Q ss_pred hhhccCCeEEeccCccccccccchhhhhhhcccC----CCCCC--CCCCCcceEEEEeCe--EEEEEeecCcCCCCCHHH
Q 008312 286 PVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFA----FPSKE--SGSLSKFYYSFNAGG--IHFLMLAAYVSFDKSGDQ 357 (570)
Q Consensus 286 ~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~----~P~~~--~~~~~~~yYSf~~G~--v~fI~Ldt~~~~~~~~~Q 357 (570)
.+ .+-. ++.||||+... ....+..... .|.+- .+..+.-|.-++.++ +-+|.|-+...-..-..-
T Consensus 55 ~~--G~Da-~TlGNHefD~~----~l~~~l~~~~~~~~~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p 127 (255)
T 1t70_A 55 EA--GAGC-LTLGNHAWHHK----DIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNP 127 (255)
T ss_dssp HH--TCSE-EECCTTTTSST----THHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCH
T ss_pred hC--CCCE-EEeccccccCc----hHHHHHhhCCCcEEEEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCH
Confidence 32 2333 55699999743 1222221111 13221 122345666788876 445555444211112222
Q ss_pred HHHHHHHHhccccCCCCEEEEEeCCCccccCCCcccchHHHHHHHHHHHHHcCCeEEEEcccccceeeeeccccCccCCC
Q 008312 358 YKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHQVHAYERSNRVYNYTLDPC 437 (570)
Q Consensus 358 ~~WLe~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~~H~YeR~~pv~n~~~~~~ 437 (570)
.+-+++.+++. +.+.+||.+|.=. ..+ .+.+.. ...-+||+++.|| .|...-... +-++
T Consensus 128 ~~~~~~~v~~l---~~d~IIv~~H~e~---------t~E--k~~la~-~~dg~vd~VvGgH-THv~~~d~~-----il~~ 186 (255)
T 1t70_A 128 FRTMDALLERD---DLGTVFVDFHAEA---------TSE--KEAMGW-HLAGRVAAVIGTH-THVPTADTR-----ILKG 186 (255)
T ss_dssp HHHHHHHTTCS---SCCEEEEEEECSC---------HHH--HHHHHH-HHTTSSSEEEEES-SCSCBSCCE-----EETT
T ss_pred HHHHHHHHHHh---CCCEEEEEeCCCC---------hHH--HHHHHH-hCCCCeEEEEeCC-CCcCCCceE-----EcCC
Confidence 34466666655 4667999999411 011 112222 2234699999999 996543211 1247
Q ss_pred CcEEEE-ECCCCcc
Q 008312 438 GPVHIT-VGDGGNR 450 (570)
Q Consensus 438 g~vyiv-~G~gG~~ 450 (570)
|+.||+ .|..|..
T Consensus 187 gt~~i~d~G~~G~y 200 (255)
T 1t70_A 187 GTAYQTDAGFTGPH 200 (255)
T ss_dssp TEEEESCCCCBEES
T ss_pred CeEEEEcCcccccC
Confidence 888876 3555554
No 42
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=97.60 E-value=0.00073 Score=69.95 Aligned_cols=40 Identities=15% Similarity=0.198 Sum_probs=27.4
Q ss_pred CCeEEEEEecCCCCCCh-----------------HHHHHHHHhCCCC-EEEEcCCccc
Q 008312 207 YPSRIAIVGDVGLTYNT-----------------TSTVSHMISNRPD-LILLVGDVTY 246 (570)
Q Consensus 207 ~~~rf~vigD~g~~~~~-----------------~~~i~~l~~~~pD-fvl~~GDl~Y 246 (570)
..++|++.+|+|..... ...++++.+..++ ++|..||++.
T Consensus 10 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~~~llld~GD~~q 67 (341)
T 3gve_A 10 VHLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNPNTLLVDNGDLIQ 67 (341)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHCSSEEEEECSCCSC
T ss_pred eEEEEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcCCCEEEEecCccCC
Confidence 36899999999975311 2245555555565 6688999995
No 43
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=97.36 E-value=0.0023 Score=66.08 Aligned_cols=40 Identities=18% Similarity=0.156 Sum_probs=28.2
Q ss_pred CCeEEEEEecCCCCCCh-----------------HHHHHHHHhCCCC-EEEEcCCccc
Q 008312 207 YPSRIAIVGDVGLTYNT-----------------TSTVSHMISNRPD-LILLVGDVTY 246 (570)
Q Consensus 207 ~~~rf~vigD~g~~~~~-----------------~~~i~~l~~~~pD-fvl~~GDl~Y 246 (570)
..++|+..+|+|..... ...++++.+..++ ++|..||++.
T Consensus 7 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~q 64 (339)
T 3jyf_A 7 VDLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQ 64 (339)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSS
T ss_pred eeEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCC
Confidence 36899999999974211 2345666666665 7789999995
No 44
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=97.27 E-value=0.0046 Score=67.68 Aligned_cols=172 Identities=18% Similarity=0.213 Sum_probs=86.5
Q ss_pred CeEEEEEecCCCCCC------------------h---HHHHHHHHhCCCC-EEEEcCCcccccccccCCCCCCcccccCC
Q 008312 208 PSRIAIVGDVGLTYN------------------T---TSTVSHMISNRPD-LILLVGDVTYANLYLTNGTGSDCYACSFA 265 (570)
Q Consensus 208 ~~rf~vigD~g~~~~------------------~---~~~i~~l~~~~pD-fvl~~GDl~Y~d~~~~~G~~~~c~~~~~~ 265 (570)
.++|++++|+|.... . ...++++.+.+++ ++|..||++....+
T Consensus 3 ~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~--------------- 67 (530)
T 4h1s_A 3 ELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIW--------------- 67 (530)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHH---------------
T ss_pred EEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHH---------------
Confidence 589999999995421 1 1234555555665 67889999953211
Q ss_pred CCCcccchHHHHHHHHHhhhhhhccCCeEEeccCccccccccchhh-hhhhcccCCCCCCC------------CCCCcce
Q 008312 266 NSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTF-VAYTSRFAFPSKES------------GSLSKFY 332 (570)
Q Consensus 266 ~~~~~e~Y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~~-~~y~~~f~~P~~~~------------~~~~~~y 332 (570)
... .+.....+.|..+. .=.+++||||+.... ..+ ..+.....+|--.. ...-..|
T Consensus 68 ----~~~--~~g~~~i~~mN~lg---yDa~~lGNHEFd~G~--~~l~~~~~~~a~fp~L~aNv~~~~~~~~~~~~~~~py 136 (530)
T 4h1s_A 68 ----FTV--YKGAEVAHFMNALR---YDAMALGNHEFDNGV--EGLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPY 136 (530)
T ss_dssp ----HHH--HTTHHHHHHHHHTT---CCEEECCGGGGTTTT--HHHHTTTTTTCSSCEECTTEEECTTHHHHHTTTSBSE
T ss_pred ----HHH--hCChHHHHHHhccC---CCEEEEchhhhccCH--HHHHHHHHhhCCCCEEEEeeeccCCcccccCCcccce
Confidence 100 11122223343331 225789999996432 112 12222223332100 0112346
Q ss_pred EEEEeCeEE--EEEeecCc-----C------CCCCHHHHHHHHHHHhccccCCCCEEEEEeCCCccccCCCcccchHHHH
Q 008312 333 YSFNAGGIH--FLMLAAYV-----S------FDKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMR 399 (570)
Q Consensus 333 YSf~~G~v~--fI~Ldt~~-----~------~~~~~~Q~~WLe~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r 399 (570)
.-++.++++ ||.+-+.. . +...-+..+..-++|++ .+..-+|++.|.-+.. .
T Consensus 137 ~I~~~~g~kIgviGltt~~~~~~~~~~~~~~f~d~v~~~~~~v~~Lr~---~g~D~II~LsH~G~~~--------d---- 201 (530)
T 4h1s_A 137 KVLPVGDEVVGIVGYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGHSGFEM--------D---- 201 (530)
T ss_dssp EEEEETTEEEEEEEEECTTHHHHSCCCTTEEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHH--------H----
T ss_pred EEEEeccEEEeeccccccceeeeccCCCCcccCcHHHHHHHHHhhhhh---cCCCEEEEeccCCchH--------H----
Confidence 667888755 55554421 0 11112223333334443 3456699999964211 1
Q ss_pred HHHHHHHHH-cCCeEEEEccccccee
Q 008312 400 VAMEDLLYK-YGVDVVFNGHQVHAYE 424 (570)
Q Consensus 400 ~~l~~ll~~-y~VdlvlsGH~~H~Ye 424 (570)
..+.++ -+||++|.|| .|.+-
T Consensus 202 ---~~la~~v~giD~IlgGH-sH~~~ 223 (530)
T 4h1s_A 202 ---KLIAQKVRGVDVVVGGH-SNTFL 223 (530)
T ss_dssp ---HHHHHHSTTCCEEECCS-SCCCB
T ss_pred ---HHHHhcCCCCCeeccCC-cccee
Confidence 123333 3799999999 99643
No 45
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.82 E-value=0.014 Score=49.04 Aligned_cols=97 Identities=19% Similarity=0.227 Sum_probs=59.2
Q ss_pred CCCCceEEEeecC-CCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCC--ceEEEeEEEEeeeecccCCcccc
Q 008312 83 GFEPEQISVSLSS-AHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQL--NRKATGRSLVYSQLYPFLGLQNY 159 (570)
Q Consensus 83 ~~~P~qi~lt~~~-~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~--~~~a~g~~~~y~~~~p~~g~~~~ 159 (570)
...|..+.+.... .++++.|+|......-|. ...=.|+|....+.. ..... ..
T Consensus 9 ~~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~--------i~~Y~v~~~~~~~~~~~~~~~~----~~------------ 64 (114)
T 2ede_A 9 TSAPKDLTVITREGKPRAVIVSWQPPLEANGK--------ITAYILFYTLDKNIPIDDWIME----TI------------ 64 (114)
T ss_dssp CSCCEEEEEEECSSCSSCEEEEEECCSSCSSC--------CSEEEEEEESCSSSCTTTSEEE----EE------------
T ss_pred CCCCcceEEEEccCCCCEEEEEECCCCCCCCc--------eeEEEEEEEeCCCCCccceEEE----EE------------
Confidence 3468888887653 468999999865321110 112356776533221 11100 00
Q ss_pred ccCeEEEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCCCC
Q 008312 160 TSGIIHHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDSSS 204 (570)
Q Consensus 160 ~~~~~h~v~ltgL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~~~ 204 (570)
.+-...++|++|+|+|.|.+||...+. +.+|+...|+|.+.+..
T Consensus 65 -~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp 111 (114)
T 2ede_A 65 -SGDRLTHQIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKVSGP 111 (114)
T ss_dssp -ETTCCEEEECSCCSSCEEEEEEEEECSSCBCCCCCCEEEECCCSSCC
T ss_pred -CCCceEEEEcCCCCCCEEEEEEEEEeCCcCcCCcccEEEEecCCCCC
Confidence 112245789999999999999865432 36788999999876654
No 46
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.57 E-value=0.01 Score=49.89 Aligned_cols=93 Identities=13% Similarity=0.111 Sum_probs=54.0
Q ss_pred CCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008312 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (570)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 163 (570)
..|..+.+...-..+++.|+|......-|..+ ..=.|+|....+..+..+. . +.
T Consensus 10 ~~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~i-------~~Y~v~~~~~~~~~~~~~~------~-------------~~ 63 (110)
T 2crz_A 10 GPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPI-------SCYSVEMSPIEKDEPREVY------Q-------------GS 63 (110)
T ss_dssp CCCCCCEECSCCCSSEEEEECCCCSCCTTSCC-------CEEEEEEECTTSCCCEEEE------E-------------ES
T ss_pred CCCCCceeccccCCCEEEEEeCCCCCCCCcee-------EEEEEEEEeCCCCceEEEE------e-------------CC
Confidence 35677766433345799999964321111101 1235666654433332221 0 01
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008312 164 IHHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (570)
Q Consensus 164 ~h~v~ltgL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 202 (570)
...++|++|+|+|.|.|||...+. +.+|+...++|.+.+
T Consensus 64 ~~~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~~~~~T~~~~ 105 (110)
T 2crz_A 64 EVECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAPGS 105 (110)
T ss_dssp CSEEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCCSC
T ss_pred cEEEEECCcCCCCEEEEEEEEEcCCccCCCCCccccccCCCC
Confidence 134578999999999999864432 367888899987654
No 47
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.51 E-value=0.009 Score=50.06 Aligned_cols=37 Identities=27% Similarity=0.345 Sum_probs=29.2
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008312 166 HVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (570)
Q Consensus 166 ~v~ltgL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 202 (570)
.+.|+||+|+|.|.|||...+. +.+|+...++|.+.+
T Consensus 62 ~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~v~~~T~~~~ 101 (106)
T 1x4x_A 62 SYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPSS 101 (106)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCCCC
T ss_pred eEEEcCCCCCCEEEEEEEEEcCCcCCCCcCCEEEECCCCC
Confidence 4578999999999999865432 357889999998654
No 48
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=96.46 E-value=0.023 Score=48.10 Aligned_cols=97 Identities=14% Similarity=0.095 Sum_probs=56.3
Q ss_pred CCCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCC---CceEEEeEEEEeeeecccCCcccc
Q 008312 83 GFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQ---LNRKATGRSLVYSQLYPFLGLQNY 159 (570)
Q Consensus 83 ~~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~---~~~~a~g~~~~y~~~~p~~g~~~~ 159 (570)
...|..+.+.-. +.+++.|+|.-.....+. + ....=.|+|...... ..... ..
T Consensus 9 ~~~P~~~~~~~~-~~~si~l~W~~p~~~~~~-----g-~i~gY~v~y~~~~~~~~~~~~~~-----~~------------ 64 (114)
T 1x4y_A 9 VAGPYITFTDAV-NETTIMLKWMYIPASNNN-----T-PIHGFYIYYRPTDSDNDSDYKKD-----MV------------ 64 (114)
T ss_dssp CSCCEEEEEECS-SSSCEEEEEECCCTTSCC-----C-CCCEEEEEECCTTSCSGGGCCCE-----EE------------
T ss_pred CCCCeEEEEEec-CCCEEEEEEeCCCchhcC-----C-ccceEEEEEEECCCCCCcceeeE-----ec------------
Confidence 345788766443 468999999875311000 0 011235666544332 10000 00
Q ss_pred ccCeEEEEEeCCCCCCCEEEEEEecCC---CCCccceeEEEcCCCCCC
Q 008312 160 TSGIIHHVRLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRTMPDSSS 204 (570)
Q Consensus 160 ~~~~~h~v~ltgL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~p~~~~ 204 (570)
.+-...++|++|+|+|.|.+||..-+ .+.+|+...|+|.+.+.+
T Consensus 65 -~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~~~p 111 (114)
T 1x4y_A 65 -EGDRYWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKARSGP 111 (114)
T ss_dssp -ETTCCEEEECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECCCCCCS
T ss_pred -CCcEeEEEcCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCCCCC
Confidence 01123578999999999999985433 236888999999876544
No 49
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.37 E-value=0.016 Score=48.45 Aligned_cols=40 Identities=25% Similarity=0.298 Sum_probs=31.5
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCCCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDSSS 204 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~~~ 204 (570)
..+.|++|+|+|.|.+||...+. +.+|+...|+|.+.+++
T Consensus 66 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~p 108 (111)
T 1x5l_A 66 TRATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGKPSGP 108 (111)
T ss_dssp SEEEECSCCTTCEEEECEEEEETTEECCCCCCEEEECCCTTSC
T ss_pred CEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEEcCCCCCC
Confidence 35688999999999999854332 36889999999887654
No 50
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.30 E-value=0.042 Score=46.51 Aligned_cols=94 Identities=20% Similarity=0.252 Sum_probs=56.5
Q ss_pred CCCceEEEeecCCCCceEEEEEeCc-ccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccC
Q 008312 84 FEPEQISVSLSSAHDSVWISWITGE-FQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (570)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~I~W~T~~-~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 162 (570)
..|.++.+.... .+++.|+|.-.. ..-| . ...=.|+|........... .. ...
T Consensus 19 ~~P~~l~~~~~~-~~sv~l~W~~p~~~~~g-~-------i~~Y~v~~~~~~~~~~~~~-------~~----------~~~ 72 (120)
T 1x5f_A 19 SAPRDVVASLVS-TRFIKLTWRTPASDPHG-D-------NLTYSVFYTKEGIARERVE-------NT----------SHP 72 (120)
T ss_dssp CCCEEEEEEEEC-SSCEEEEEECCSSCSSC-C-------SSEEEEEEEETTCCCCEEE-------EC----------SST
T ss_pred CCCCCcEEEecC-CCEEEEEECCCCCCCCC-c-------EEEEEEEEEECCCCCceEE-------Ee----------ccC
Confidence 367888776543 689999998643 1111 1 1223567765543222110 00 001
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCCC---CccceeEEEcCCCCC
Q 008312 163 IIHHVRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTMPDSS 203 (570)
Q Consensus 163 ~~h~v~ltgL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~~ 203 (570)
-...+.|+||+|+|.|.+||...+.. .+|+...|+|.+...
T Consensus 73 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 116 (120)
T 1x5f_A 73 GEMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPESG 116 (120)
T ss_dssp TCSEEEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCCCCC
T ss_pred CccEEEeCCCCCCCEEEEEEEEECCCccCCCCCCEEEEeCCCCC
Confidence 13457899999999999998654432 568888999976543
No 51
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1
Probab=96.21 E-value=0.018 Score=48.00 Aligned_cols=92 Identities=17% Similarity=0.191 Sum_probs=52.8
Q ss_pred CceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCeEE
Q 008312 86 PEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGIIH 165 (570)
Q Consensus 86 P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 165 (570)
|..+.+.... .+ +.|+|.-....-|.-+ ..=.|+|.......+... +... . ..+-..
T Consensus 10 P~~~~~~~~~-~~-v~l~W~~P~~~~G~pi-------~~Y~v~~~~~~~~~~~~~------~~~~-~-------~~~~~~ 66 (105)
T 2haz_A 10 PSIDQVEPYS-ST-AQVQFDEPEATGGVPI-------LKYKAEWRAVGEEVWHSK------WYDA-K-------EASMEG 66 (105)
T ss_dssp CEEEEEEECS-SC-EEEEEECCSCCTTSCC-------CEEEEEEEETTCCCCEEE------EEEH-H-------HHHHHS
T ss_pred CCCCEEEEcC-Cc-EEEEEcCCcccCCccc-------cEEEEEEEECCCCCCccc------eEEc-c-------ccCCcc
Confidence 7777766544 34 9999986532212101 123567765543322110 0000 0 001123
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCC
Q 008312 166 HVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMP 200 (570)
Q Consensus 166 ~v~ltgL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p 200 (570)
.++|+||+|+|.|.+||...+. +.+|+...|+|.|
T Consensus 67 ~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 67 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCccCCCcCCEeeEEec
Confidence 5689999999999999864332 3678889999987
No 52
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.20 E-value=0.068 Score=46.20 Aligned_cols=94 Identities=21% Similarity=0.246 Sum_probs=55.0
Q ss_pred CCCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCC--ceEEEeEEEEeeeecccCCccccc
Q 008312 83 GFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQL--NRKATGRSLVYSQLYPFLGLQNYT 160 (570)
Q Consensus 83 ~~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~--~~~a~g~~~~y~~~~p~~g~~~~~ 160 (570)
...|.+|++.-- +.+++.|+|.-.....+..+. ....=.|+|....... ...+.
T Consensus 19 p~~P~~l~~~~~-s~tsi~lsW~~p~~~~~~i~~----~~~~Y~v~y~~~~~~~~~~~~~~------------------- 74 (123)
T 2edd_A 19 MLPPVGVQAVAL-THDAVRVSWADNSVPKNQKTS----EVRLYTVRWRTSFSASAKYKSED------------------- 74 (123)
T ss_dssp SCCCEEEEEEEE-ETTEEEEEEECSSSCSSCCCS----CCCCEEEEEEETTCTTCCCCCEE-------------------
T ss_pred CCCCcceEEEEc-CCCeEEEEecCCCCCcccccC----cCceEEEEEEECCCCCccEEEEe-------------------
Confidence 346888876543 368999999853211110000 0012356676542211 01000
Q ss_pred cCeEEEEEeCCCCCCCEEEEEEecCC---CCCccceeEEEcCCC
Q 008312 161 SGIIHHVRLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRTMPD 201 (570)
Q Consensus 161 ~~~~h~v~ltgL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~p~ 201 (570)
.....+.|+||+|+|.|.++|...+ .+.||....|+|.+.
T Consensus 75 -~~~~~~~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 75 -TTSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp -ESSSEEEEESCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred -CCceEEEecCCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 0123578999999999999986543 247888999999876
No 53
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=96.19 E-value=0.0026 Score=63.17 Aligned_cols=38 Identities=24% Similarity=0.355 Sum_probs=25.0
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHhCCC-CEEEEcCCccc
Q 008312 209 SRIAIVGDVGLTYNT-TSTVSHMISNRP-DLILLVGDVTY 246 (570)
Q Consensus 209 ~rf~vigD~g~~~~~-~~~i~~l~~~~p-Dfvl~~GDl~Y 246 (570)
.|++++||+|..... ...++.+....+ |.+|++||++.
T Consensus 19 ~~i~visDiHg~~~~l~~~l~~~~~~~~~d~ii~~GD~vd 58 (262)
T 2qjc_A 19 GRVIIVGDIHGCRAQLEDLLRAVSFKQGSDTLVAVGDLVN 58 (262)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTCCTTTSEEEECSCCSS
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHhccCCCCEEEEecCCCC
Confidence 489999999954211 122333333344 99999999995
No 54
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=96.17 E-value=0.0033 Score=63.14 Aligned_cols=38 Identities=21% Similarity=0.307 Sum_probs=24.4
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHh-CCCCEEEEcCCccc
Q 008312 209 SRIAIVGDVGLTYNT-TSTVSHMIS-NRPDLILLVGDVTY 246 (570)
Q Consensus 209 ~rf~vigD~g~~~~~-~~~i~~l~~-~~pDfvl~~GDl~Y 246 (570)
+|++++||+|..... ...++.+.. .++|.+|++||++.
T Consensus 1 M~i~vigDiHG~~~~l~~ll~~~~~~~~~d~~v~lGD~vd 40 (280)
T 2dfj_A 1 MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVA 40 (280)
T ss_dssp -CEEEECCCCSCHHHHHHHHHHTTCCTTTCEEEECSCCSS
T ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCcCC
Confidence 478999999975321 112222222 35799999999995
No 55
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.09 E-value=0.0082 Score=49.47 Aligned_cols=88 Identities=24% Similarity=0.246 Sum_probs=50.9
Q ss_pred CCCceEEEeecCCCCceEEEEEeCc--ccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCcccccc
Q 008312 84 FEPEQISVSLSSAHDSVWISWITGE--FQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTS 161 (570)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~I~W~T~~--~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~ 161 (570)
..|..+.+... +.+++.|+|.... ...|. ...=.|+|..........+.+
T Consensus 10 ~~P~~l~~~~~-~~~si~l~W~~p~~~~~~g~--------i~~Y~i~~~~~~~~~~~~~~~------------------- 61 (103)
T 2edy_A 10 GFPQNLHVTGL-TTSTTELAWDPPVLAERNGR--------IISYTVVFRDINSQQELQNIT------------------- 61 (103)
T ss_dssp CCCEEEECSSB-CSSCEECEEECCCTTSCSSC--------CCEEEEEEEETTSCCEEEEEE-------------------
T ss_pred CCCeeeEEEec-CCCEEEEEECCCCCcCCCCc--------EeEEEEEEEECCCCccEEEcC-------------------
Confidence 45777766432 4689999998752 11110 112345665544322111100
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCC
Q 008312 162 GIIHHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMP 200 (570)
Q Consensus 162 ~~~h~v~ltgL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p 200 (570)
-...+.|+||+|+|.|.+||..-+. +.+|+...|+|.|
T Consensus 62 -~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 62 -TDTRFTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp -SSSCCEECSCCTTCCEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred -CcceEEEcCCCCCCEEEEEEEEECCCCCCCCCCCEEEEecc
Confidence 0123578999999999999854332 3577778888865
No 56
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=95.96 E-value=0.051 Score=45.22 Aligned_cols=89 Identities=17% Similarity=0.227 Sum_probs=53.7
Q ss_pred CCceEEEeec-CCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008312 85 EPEQISVSLS-SAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (570)
Q Consensus 85 ~P~qi~lt~~-~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 163 (570)
.|..+.+... .+.+++.|+|.-.....|. ...=.|+|....+..+..... .
T Consensus 10 ~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~--------i~~Y~v~~~~~~~~~~~~~~~------------------~-- 61 (108)
T 2dm4_A 10 APRNLQLSLPREAEGVIVGHWAPPIHTHGL--------IREYIVEYSRSGSKMWASQRA------------------A-- 61 (108)
T ss_dssp SCEEEEEECCTTCSSCEEEEEECCSCCSSC--------EEEEEEEEEETTCSCCEEEEE------------------S--
T ss_pred CCcCeEEEEeccCCCEEEEEEcCCCCCCCc--------EEEEEEEEEECCCCCeEEecC------------------C--
Confidence 6888877653 2468999999864321110 011245555544332221100 0
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCC
Q 008312 164 IHHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPD 201 (570)
Q Consensus 164 ~h~v~ltgL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~ 201 (570)
...+.|++|+|+|.|.+||..-+. +.+|+...|+|.+.
T Consensus 62 ~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 102 (108)
T 2dm4_A 62 SNFTEIKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITTIKG 102 (108)
T ss_dssp SSEEEECSCCSSCEEEEEEEEEESSCEEEECCCEEEECCSC
T ss_pred ccEEEeCCCCCCCEEEEEEEEECCCceeCCCCCEEEECCCC
Confidence 125689999999999999864432 26788889999643
No 57
>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.95 E-value=0.035 Score=46.36 Aligned_cols=37 Identities=24% Similarity=0.273 Sum_probs=28.7
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC---CccceeEEEcCCCC
Q 008312 166 HVRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTMPDS 202 (570)
Q Consensus 166 ~v~ltgL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~ 202 (570)
.++|++|+|+|.|+|||...+.. .+|+...++|.+..
T Consensus 65 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 104 (109)
T 1x5x_A 65 AYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPDS 104 (109)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCCCcCCccCEEeEeCCCC
Confidence 45789999999999998765432 46778889987653
No 58
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.92 E-value=0.023 Score=47.30 Aligned_cols=39 Identities=33% Similarity=0.697 Sum_probs=30.1
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDSS 203 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~~ 203 (570)
..+.|+||+|+|.|.+||...+. +.+|+...|+|.+...
T Consensus 63 ~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~ 104 (108)
T 2djs_A 63 NTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTDSG 104 (108)
T ss_dssp SEEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCCSSC
T ss_pred cEEEEcCCCCCCEEEEEEEEEeCCEECCCCCCEEEEeCCCCc
Confidence 35678999999999999865432 2578889999987653
No 59
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.92 E-value=0.064 Score=44.36 Aligned_cols=89 Identities=17% Similarity=0.092 Sum_probs=54.0
Q ss_pred CCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCeE
Q 008312 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (570)
Q Consensus 85 ~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 164 (570)
.|.++.+.... .+++.|+|.-....-| . ...=.|+|............. . .
T Consensus 10 ~P~~l~~~~~~-~~si~l~W~~p~~~~g-~-------i~~Y~v~~~~~~~~~~~~~~~-----------~---------~ 60 (106)
T 2ed8_A 10 PVENLQAVSTS-PTSILITWEPPAYANG-P-------VQGYRLFCTEVSTGKEQNIEV-----------D---------G 60 (106)
T ss_dssp CCEEEEEECSS-TTEEEEEEECCSSCSS-C-------CCEEEEEEEETTTCCEEEEEE-----------C---------S
T ss_pred CCceeEEEecC-CCEEEEEECCCCCCCC-C-------eeEEEEEEEECCCCceEEEeC-----------C---------c
Confidence 68888776443 6899999986532111 0 122356665544332211100 0 1
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---CccceeEEEcCCCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTMPDS 202 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~ 202 (570)
..+.|++|+|+|.|.+||..-+.. .+|+...|+|....
T Consensus 61 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 101 (106)
T 2ed8_A 61 LSYKLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSDS 101 (106)
T ss_dssp SCEEEESCCTTCEEEEEEEEECSSCEEEECCCEEEECCCCC
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCccCCCcCCEEEEcCCCC
Confidence 245789999999999998654422 57788899987553
No 60
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.84 E-value=0.046 Score=45.94 Aligned_cols=89 Identities=17% Similarity=0.186 Sum_probs=52.9
Q ss_pred CCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCeE
Q 008312 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (570)
Q Consensus 85 ~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 164 (570)
.|..+++.-. +.+++.|+|......-|. ...=.|+|..........+.. ..
T Consensus 20 ~P~~l~~~~~-~~~si~l~W~~p~~~~~~--------i~~Y~v~~~~~~~~~~~~~~~--------------------~~ 70 (116)
T 1x5g_A 20 PAPNLRAYAA-SPTSITVTWETPVSGNGE--------IQNYKLYYMEKGTDKEQDVDV--------------------SS 70 (116)
T ss_dssp CCSSCEEEEE-ETTEEEEECCCCSCCSSC--------CSEEEEEEEETTCCCCCCEEE--------------------CS
T ss_pred CCCccEEEec-CCCEEEEEEeCCCCCCCc--------ccEEEEEEEECCCCccEEEec--------------------CC
Confidence 5677766543 367999999864321110 112346665543322211110 11
Q ss_pred EEEEeCCCCCCCEEEEEEecCC---CCCccceeEEEcCCCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRTMPDS 202 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~p~~ 202 (570)
..+.|+||+|+|.|.+||..-+ .+.+|+...|+|.+..
T Consensus 71 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 111 (116)
T 1x5g_A 71 HSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSDS 111 (116)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECCCSS
T ss_pred ceEEEcCCCCCCEEEEEEEEEcCCCcCCCCCCEEEECCCCC
Confidence 3567899999999999985433 2357888899997654
No 61
>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.83 E-value=0.057 Score=45.85 Aligned_cols=90 Identities=18% Similarity=0.124 Sum_probs=52.0
Q ss_pred CCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008312 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (570)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 163 (570)
..|.+++++-- +.+++.|+|.-.... ...=.|+|....+.....+. + .+-
T Consensus 9 ~pP~~l~~~~v-t~tsi~vsW~pp~~~-----------i~~Y~I~y~~~~~~~~~~~~----v--------------~~~ 58 (108)
T 2ee3_A 9 APPRHLGFSDV-SHDAARVFWEGAPRP-----------VRLVRVTYVSSEGGHSGQTE----A--------------PGN 58 (108)
T ss_dssp CCSSCEEEESC-CSSCEEEEESCCSSC-----------CSEEEEEEEETTTCCBCCEE----E--------------ETT
T ss_pred CCCceEEEEEc-cCCeEEEEeeCCCCC-----------ccEEEEEEEeCCCCceeEEE----c--------------CCC
Confidence 45888887533 368999999753211 12235677655432111100 0 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCccc--eeEEEcCCCCC
Q 008312 164 IHHVRLTGLKPDTLYHYQCGDPSIPAMSG--TYCFRTMPDSS 203 (570)
Q Consensus 164 ~h~v~ltgL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~p~~~ 203 (570)
...+.|+||+|+|.|..+|-.-+..+.|+ ...|+|.+.+.
T Consensus 59 ~t~~~l~~L~p~T~Y~v~V~A~~~~g~s~p~~~~~~T~~vP~ 100 (108)
T 2ee3_A 59 ATSAMLGPLSSSTTYTVRVTCLYPGGGSSTLTGRVTTKKAPS 100 (108)
T ss_dssp CCEEEECSCCSSCEEEEEEEEECTTSCEEEEEEEEECCCCCC
T ss_pred cCEEEcCCCCCCCEEEEEEEEEeCCCcCCCccCEEEeCCCCC
Confidence 23578999999999999986544333333 34688874443
No 62
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=95.79 E-value=0.037 Score=59.35 Aligned_cols=138 Identities=17% Similarity=0.230 Sum_probs=79.1
Q ss_pred CeEEEEEecCCCCCCh-H--HH----HHHHH-----------hCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCc
Q 008312 208 PSRIAIVGDVGLTYNT-T--ST----VSHMI-----------SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPI 269 (570)
Q Consensus 208 ~~rf~vigD~g~~~~~-~--~~----i~~l~-----------~~~pDfvl~~GDl~Y~d~~~~~G~~~~c~~~~~~~~~~ 269 (570)
+.++++++|+|.+... . .. ++.+. ..+...+|++||.+...+ ... +..+
T Consensus 200 ~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~-----~~~--------e~~~ 266 (476)
T 3e0j_A 200 DRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHST-----QSR--------DSIN 266 (476)
T ss_dssp CCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC----------------------
T ss_pred CCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCcccccc-----ccc--------hhhh
Confidence 5699999999998763 1 12 22222 236789999999995421 100 0001
Q ss_pred ccch---------HHHHHHHHHhhhhhhccCCeEEeccCccccccccc-----hh-h---hhhhcccCCCCCCCCCCCcc
Q 008312 270 HETY---------QPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAEN-----RT-F---VAYTSRFAFPSKESGSLSKF 331 (570)
Q Consensus 270 ~e~Y---------~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~-----~~-~---~~y~~~f~~P~~~~~~~~~~ 331 (570)
...| ....+.+.+++..+...+|+.++|||||-....-. +. | ..| ..|.. -..
T Consensus 267 ~~~y~~~~~~~~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~~lPQqplh~~lfp~s~~~-~~~~~--------vtN 337 (476)
T 3e0j_A 267 KAKYLTKKTQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAY-STLQL--------VTN 337 (476)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHTTSCEEEECCTTSSSCSSSSCCCCCTTSCHHHHTS-TTEEE--------CCS
T ss_pred hhhccccccchhhHHHHHHHHHHHHhcccCceEEecCCCCCcccccCCCCCcCHHHhhhhhhc-CccEE--------eCC
Confidence 1111 12345666777888889999999999998643211 00 0 111 01111 112
Q ss_pred eEEEEeCeEEEEEeecCc-----CCCCCHHHHHHHHHHHhc
Q 008312 332 YYSFNAGGIHFLMLAAYV-----SFDKSGDQYKWLEEDLAN 367 (570)
Q Consensus 332 yYSf~~G~v~fI~Ldt~~-----~~~~~~~Q~~WLe~~L~~ 367 (570)
-|.|++++++|++..... .|.....-++.|++.|+.
T Consensus 338 P~~~~i~G~~~LgtsGqnidDi~ky~~~~~~l~~me~~Lkw 378 (476)
T 3e0j_A 338 PYQATIDGVRFLGTSGQNVSDIFRYSSMEDHLEILEWTLRV 378 (476)
T ss_dssp SEEEEETTEEEEECSSHHHHHHHHHSCCCCHHHHHHHHHHB
T ss_pred CeEEEECCEEEEEECCCCHHHHHhcCCCCCHHHHHHHHHHH
Confidence 356999999999886531 122334566788888876
No 63
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.77 E-value=0.024 Score=48.35 Aligned_cols=96 Identities=24% Similarity=0.321 Sum_probs=55.1
Q ss_pred CCCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccC
Q 008312 83 GFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (570)
Q Consensus 83 ~~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 162 (570)
...|.+|++.--. .+++.|+|.-.....+..+ .....=.|+|......... +.. ...
T Consensus 9 p~~P~~l~~~~~s-~tsi~lsW~~p~~~~~~~~----~~~~~Y~v~y~~~~~~~~~--------~~~----------~~~ 65 (113)
T 1x5j_A 9 MMPPVGVQASILS-HDTIRITWADNSLPKHQKI----TDSRYYTVRWKTNIPANTK--------YKN----------ANA 65 (113)
T ss_dssp CCCCEEEEEEEEE-TTEEEEEEECTTSCSSSCC----CSSCEEEEEECBSSSSSCC--------CEE----------CCB
T ss_pred CCCCcceEEEEec-CCEEEEEecCCCCcccccc----CcCceEEEEEEECCCCCeE--------EEE----------Eec
Confidence 3468888776543 6899999986432111000 0001235667652111000 000 001
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCC---CCCccceeEEEcCCC
Q 008312 163 IIHHVRLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRTMPD 201 (570)
Q Consensus 163 ~~h~v~ltgL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~p~ 201 (570)
-...+.|+||+|+|.|.++|...+ .+.+|....++|.+.
T Consensus 66 ~~~~~~i~gL~P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 66 TTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp CSSEEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECCCS
T ss_pred CcCEEEeCCCCCCcEEEEEEEEecCCccCCCcccEEeeccCC
Confidence 123678999999999999986433 236888999999865
No 64
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.72 E-value=0.072 Score=45.12 Aligned_cols=39 Identities=28% Similarity=0.210 Sum_probs=30.2
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDSS 203 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~~ 203 (570)
..+.|+||+|+|.|.+||..-+. +.+|+...|+|.+.+.
T Consensus 74 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 115 (119)
T 2ee2_A 74 YSARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKASG 115 (119)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEECCCCCC
T ss_pred eEEEECCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCCCCC
Confidence 36789999999999999864332 3678888999976654
No 65
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.64 E-value=0.04 Score=46.12 Aligned_cols=39 Identities=26% Similarity=0.198 Sum_probs=30.7
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCCCC
Q 008312 166 HVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDSSS 204 (570)
Q Consensus 166 ~v~ltgL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~~~ 204 (570)
.+.|+||+|+|.|.+||...+. +.+|+...|+|.+.+.+
T Consensus 65 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~p 106 (109)
T 2e7h_A 65 RAELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQLDSGP 106 (109)
T ss_dssp EEEEESCCTTSCEEEEEEEECSSCBCCCCSCEECCCCCCSSC
T ss_pred EEEECCCCCCCeEEEEEEEEeCCccCCCCCCEEEEcCCCCCC
Confidence 5688999999999999865432 36888999999876543
No 66
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=95.58 E-value=0.12 Score=42.60 Aligned_cols=80 Identities=18% Similarity=0.237 Sum_probs=47.0
Q ss_pred CCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCeE
Q 008312 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (570)
Q Consensus 85 ~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 164 (570)
.|.++.+.-- +.+++.|+|.-.... ...=.|+|............ . ..+-.
T Consensus 4 ~P~~l~~~~~-~~~sv~lsW~pP~~~-----------i~~Y~v~y~~~~~~~~~~~~----~-------------~~~~~ 54 (100)
T 3b83_A 4 PPFNIKVTNI-TLTTAVVTWQPPILP-----------IEGILVTFGRKNDPSDETTV----D-------------LTSSI 54 (100)
T ss_dssp CCEEEEEESC-CSSCEEEEEECCSSC-----------CSEEEEEEEESSCTTTCEEE----E-------------ECTTE
T ss_pred cCCccEEEEe-cCCEEEEEEcCCccc-----------CCEEEEEEEECCCCCCceEE----E-------------ECCcc
Confidence 5788877643 368999999754211 12235777644322111100 0 01223
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCccce
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPSIPAMSGT 193 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~~~~~S~~ 193 (570)
-.++|+||+|+|.|.+||...+..+.|+.
T Consensus 55 t~~~i~~L~p~t~Y~~~V~A~n~~g~s~p 83 (100)
T 3b83_A 55 TSLTLTNLEPNTTYEIRIVARNGQQYSPP 83 (100)
T ss_dssp EEEEECSCCTTCEEEEEEEEEETTEECCC
T ss_pred eEEEECCCCCCCEEEEEEEEEeCCCCCCC
Confidence 56789999999999999976554455543
No 67
>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}
Probab=95.57 E-value=0.056 Score=44.22 Aligned_cols=88 Identities=17% Similarity=0.151 Sum_probs=51.8
Q ss_pred CCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCeE
Q 008312 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (570)
Q Consensus 85 ~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 164 (570)
.|.++.+.-.. .+++.|+|.-.... ...=.|+|....+...... ... ..-.
T Consensus 4 ~P~~l~v~~~~-~~sv~l~W~~p~~~-----------i~~Y~v~y~~~~~~~~~~~----~~~-------------~~~~ 54 (98)
T 3teu_A 4 APTDLQVTNVT-DTSITVSWTPPSAT-----------ITGYRITYTPSNGPGEPKE----LTV-------------PPSS 54 (98)
T ss_dssp CCEEEEEEEEC-SSCEEEEEECCSSC-----------CSEEEEEEEETTSCSCCEE----EEE-------------CTTC
T ss_pred CCCceEEEEec-CCEEEEEEeCCCCc-----------ccEEEEEEEECCCCCceEE----EEc-------------CCCc
Confidence 57888775433 58999999864211 1123567764332211110 000 0112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCccceeEEEcCCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPSIPAMSGTYCFRTMPD 201 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p~ 201 (570)
..+.|+||+|+|.|.+||...+..+.|+...+.+++.
T Consensus 55 ~~~~i~~L~p~t~Y~~~V~A~n~~G~s~p~~~~~~~~ 91 (98)
T 3teu_A 55 TSVTITGLTPGVEYVVSVYALKDNQESPPLVGTQTTG 91 (98)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECS
T ss_pred CEEEecCCCCCCEEEEEEEEEeCCCCCCCeEEEeccC
Confidence 3578999999999999997665556666666655544
No 68
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.49 E-value=0.081 Score=44.21 Aligned_cols=38 Identities=37% Similarity=0.511 Sum_probs=29.6
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 202 (570)
..+.|+||+|+|.|.+||...+. +.+|+...|+|.+..
T Consensus 70 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 110 (115)
T 1x5z_A 70 TSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSS 110 (115)
T ss_dssp SEEEEECCCTTCEEEECEEEECSSCEEEECCCEEEECCCCC
T ss_pred cEEEECCCCCCCeEEEEEEEECCCcccCCCcCEEEecCCCC
Confidence 35678999999999999865442 257788899998654
No 69
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.39 E-value=0.16 Score=43.38 Aligned_cols=38 Identities=8% Similarity=0.019 Sum_probs=29.6
Q ss_pred EEEeCCCCCCCEEEEEEecCC---CCCccceeEEEcCCCCC
Q 008312 166 HVRLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRTMPDSS 203 (570)
Q Consensus 166 ~v~ltgL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~p~~~ 203 (570)
.++|++|+|+|.|.+||..-+ .+.+|+...|+|.+...
T Consensus 80 ~~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~~~ 120 (124)
T 2dbj_A 80 RARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAHSG 120 (124)
T ss_dssp CEEEECCCSSSEEEECEEEEESSCBCCCCCCEEEECCCSCC
T ss_pred eEEecCCCCCCEEEEEEEEECCCccCCCCCCEEEEcCCCCC
Confidence 567899999999999985432 23688999999986543
No 70
>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.37 E-value=0.064 Score=45.90 Aligned_cols=90 Identities=21% Similarity=0.213 Sum_probs=52.4
Q ss_pred CCCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCC---------CceEEEeEEEEeeeeccc
Q 008312 83 GFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQ---------LNRKATGRSLVYSQLYPF 153 (570)
Q Consensus 83 ~~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~---------~~~~a~g~~~~y~~~~p~ 153 (570)
...|.+++++-- +.+++.|+|.-.... ...=.|+|....+. ...... .
T Consensus 9 pp~p~~L~v~~~-T~~Si~LsW~~p~g~-----------v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~---------v-- 65 (112)
T 2cui_A 9 RPRLSQLSVTDV-TTSSLRLNWEAPPGA-----------FDSFLLRFGVPSPSTLEPHPRPLLQRELM---------V-- 65 (112)
T ss_dssp CCCCCCCEEESC-CSSCEEEECCCCTTS-----------CSEEEEEEECCCCSSSCCCSSCCCCEEEE---------E--
T ss_pred CCCCCceEEEee-cCCeEEEEECCCCCC-----------ccEEEEEEEeCCCCccccccccCcceEEE---------c--
Confidence 345788887644 368999999753211 12346778764432 011100 0
Q ss_pred CCccccccCeEEEEEeCCCCCCCEEEEEEecCCCCCcc--ceeEEEcCCCC
Q 008312 154 LGLQNYTSGIIHHVRLTGLKPDTLYHYQCGDPSIPAMS--GTYCFRTMPDS 202 (570)
Q Consensus 154 ~g~~~~~~~~~h~v~ltgL~P~T~Y~Yrvg~~~~~~~S--~~~~F~T~p~~ 202 (570)
++-...++|+||+|+|.|.++|..-.....| -....+|.+.+
T Consensus 66 -------~~~~t~~~l~gL~PgT~Y~~~V~A~~~~~~s~p~~~~~~T~~~~ 109 (112)
T 2cui_A 66 -------PGTRHSAVLRDLRSGTLYSLTLYGLRGPHKADSIQGTARTLSGP 109 (112)
T ss_dssp -------ETTCCEEEECSCCTTCEEEEEEEEECSSSEEEEEEEEEECCCCS
T ss_pred -------CCCcCEEEeCCCCCCCEEEEEEEEEECCcccCCEEEEEEECCCC
Confidence 1112367899999999999998654433333 34566676543
No 71
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=95.35 E-value=0.053 Score=46.67 Aligned_cols=83 Identities=20% Similarity=0.233 Sum_probs=48.2
Q ss_pred CCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCeEEEEEeCCCCC
Q 008312 95 SAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGIIHHVRLTGLKP 174 (570)
Q Consensus 95 ~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h~v~ltgL~P 174 (570)
...+++.|+|.-.. .|. .|+ ..=.|+|.......+..+... + +....++|+||+|
T Consensus 19 ~~~~sv~L~W~p~~--dgg--sPI----~~Y~I~yr~~~~~~w~~~~~~--------~---------~~~~~~~l~~L~p 73 (114)
T 2kbg_A 19 SSGKSFKLSITKQD--DGG--API----LEYIVKYRSKDKEDQWLEKKV--------Q---------GNKDHIILEHLQW 73 (114)
T ss_dssp CSTTCEEEEECCCC--CSS--SCC----SEEEEEEEESSCCSCCEEEEE--------E---------TTTCCEEECCCCT
T ss_pred cCCCEEEEEEECCC--CCC--Ccc----cEEEEEEEeCCCCCcEEeEEc--------C---------CCcCEEEEcCCCC
Confidence 35689999997532 111 111 234678877644333221110 0 1112467999999
Q ss_pred CCEEEEEEecCCCCCccc--eeEEEcCCCC
Q 008312 175 DTLYHYQCGDPSIPAMSG--TYCFRTMPDS 202 (570)
Q Consensus 175 ~T~Y~Yrvg~~~~~~~S~--~~~F~T~p~~ 202 (570)
++.|.+||...+.-+.|+ ...|+|.+.+
T Consensus 74 ~t~Y~frV~A~N~~G~s~pS~~~~~T~~~~ 103 (114)
T 2kbg_A 74 TMGYEVQITAANRLGYSEPTVYEFSMPPKP 103 (114)
T ss_dssp TCCEEEEEEEECTTSCEEEEEEEECCCCCC
T ss_pred CCEEEEEEEEEeCCcCcCCcCCEEEcCCCC
Confidence 999999997654334333 5678886554
No 72
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.35 E-value=0.17 Score=42.40 Aligned_cols=93 Identities=19% Similarity=0.224 Sum_probs=53.5
Q ss_pred CCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008312 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (570)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 163 (570)
..|..+.+... ..+++.|+|.-.....|. ...=.|+|........... .. ...-
T Consensus 19 ~~P~~l~~~~~-~~~sv~l~W~~p~~~~~~--------i~~Y~v~~~~~~~~~~~~~-------~~----------~~~~ 72 (119)
T 2ed7_A 19 SAPRDVVPVLV-SSRFVRLSWRPPAEAKGN--------IQTFTVFFSREGDNRERAL-------NT----------TQPG 72 (119)
T ss_dssp CCCSCCEEEEE-CSSCEEEECCCCSCCSSC--------EEEEEEEEEESSCCCCEEE-------EC----------CCTT
T ss_pred cCCcceEEEec-CCCEEEEEEeCCCCCCCc--------EEEEEEEEEeCCCCcceee-------Ee----------ecCC
Confidence 46777777653 368999999754321000 0112345544433222111 00 0011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC---CCCccceeEEEcCCCC
Q 008312 164 IHHVRLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRTMPDS 202 (570)
Q Consensus 164 ~h~v~ltgL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~p~~ 202 (570)
...+.|++|+|+|.|.+||..-+ .+.+|+...++|.+..
T Consensus 73 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 114 (119)
T 2ed7_A 73 SLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPES 114 (119)
T ss_dssp CCEEEECSCCSSSEEEECCEEEESSCBCSCCCCEEEECCCCS
T ss_pred ceEEEeCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCCC
Confidence 34578899999999999975432 2367888899997654
No 73
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=95.34 E-value=0.011 Score=60.14 Aligned_cols=38 Identities=16% Similarity=0.176 Sum_probs=24.3
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCCccc
Q 008312 209 SRIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTY 246 (570)
Q Consensus 209 ~rf~vigD~g~~~~~-~~~i~~l~~~~pDfvl~~GDl~Y 246 (570)
.+++++||+|..... ...++.+.....+.+|++||++.
T Consensus 50 ~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~VD 88 (309)
T 2ie4_C 50 CPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVD 88 (309)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHHCCTTTSCEEECSCCSS
T ss_pred CCEEEEecCCCCHHHHHHHHHHcCCCCCCEEEEeCCccC
Confidence 479999999975321 11222222235677899999995
No 74
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.31 E-value=0.14 Score=43.86 Aligned_cols=38 Identities=24% Similarity=0.106 Sum_probs=29.1
Q ss_pred EEEEeCCCCCCCEEEEEEecCC---CCCccceeEEEcCCCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRTMPDS 202 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~p~~ 202 (570)
..++|+||+|+|.|.+||..-+ .+.+|....|+|....
T Consensus 79 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 119 (134)
T 2edx_A 79 SSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDV 119 (134)
T ss_dssp SEEEEESCCTTCEEEEEEEEEETTBCCCCCCCEEEECCCCS
T ss_pred cEEEeCCCCCCCEEEEEEEEEcCCCcCCCCCCEEeecCCCC
Confidence 4678899999999999985433 2367888889997553
No 75
>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A
Probab=95.29 E-value=0.11 Score=43.27 Aligned_cols=90 Identities=18% Similarity=0.158 Sum_probs=49.5
Q ss_pred CCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCC-CceEEEeEEEEeeeecccCCccccccC
Q 008312 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQ-LNRKATGRSLVYSQLYPFLGLQNYTSG 162 (570)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~-~~~~a~g~~~~y~~~~p~~g~~~~~~~ 162 (570)
..|.++.+.- -+.+++.|+|.-.. |. ...=.|+|...... ...... . .+
T Consensus 4 ~~P~~l~v~~-~t~~sv~lsW~~p~---~~--------i~~Y~v~y~~~~~~~~~~~~~-----v-------------~~ 53 (104)
T 2rb8_A 4 DAPSQIEVKD-VTDTTALITWMPPS---QP--------VDGFELTYGIKDVPGDRTTID-----L-------------TE 53 (104)
T ss_dssp CCCEEEEEES-CCSSCEEEEEECCS---SC--------CSEEEEEEEETTCTTCCEEEE-----E-------------ET
T ss_pred CCCCccEEEE-ecCCeEEEEEcCCC---Cc--------cceEEEEEEECcCCCceEEEE-----c-------------CC
Confidence 3578887754 34689999997532 11 11235677543311 111110 0 01
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCCCC--ccceeEEEcCCCCC
Q 008312 163 IIHHVRLTGLKPDTLYHYQCGDPSIPA--MSGTYCFRTMPDSS 203 (570)
Q Consensus 163 ~~h~v~ltgL~P~T~Y~Yrvg~~~~~~--~S~~~~F~T~p~~~ 203 (570)
-...+.|+||+|+|.|.++|..-+..+ ......|+|.+...
T Consensus 54 ~~~~~~l~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~~~~~ 96 (104)
T 2rb8_A 54 DENQYSIGNLKPDTEYEVSLISRRGDMSSNPAKETFTTGLAAA 96 (104)
T ss_dssp TCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCC---
T ss_pred CcCEEEeCCCCCCCEEEEEEEEEeCCccCCCEEEEEECCCCcc
Confidence 123568999999999999986543222 22356788876643
No 76
>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.23 E-value=0.066 Score=44.60 Aligned_cols=38 Identities=26% Similarity=0.231 Sum_probs=26.7
Q ss_pred EEEeCCCCCCCEEEEEEecCCCCCccc--eeEEEcCCCCC
Q 008312 166 HVRLTGLKPDTLYHYQCGDPSIPAMSG--TYCFRTMPDSS 203 (570)
Q Consensus 166 ~v~ltgL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~p~~~ 203 (570)
.+.|+||+|+|.|.++|...+....|. ...++|.|.+.
T Consensus 62 ~~~l~~L~p~t~Y~~~V~A~~~~~~s~p~~~~~~T~p~~~ 101 (104)
T 2dkm_A 62 EVLLDGLEPGRDYEVSVQSLRGPEGSEARGIRARTPTSGP 101 (104)
T ss_dssp EEEEESCCTTCCEEEEEEEECSSSBCCCEEEECCCCCCSC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCEEEEEEcCCCCC
Confidence 778999999999999987554333443 44566765543
No 77
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.22 E-value=0.075 Score=43.65 Aligned_cols=88 Identities=17% Similarity=0.200 Sum_probs=52.0
Q ss_pred CCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCC-ceEEEeEEEEeeeecccCCccccccCe
Q 008312 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQL-NRKATGRSLVYSQLYPFLGLQNYTSGI 163 (570)
Q Consensus 85 ~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~-~~~a~g~~~~y~~~~p~~g~~~~~~~~ 163 (570)
.|..+.+.-. ..+++.|+|.... +.. ...=.|+|....... ...+. ...
T Consensus 10 ~P~~~~~~~~-~~~sv~l~W~~~~---~~~-------i~~Y~v~~~~~~~~~~~~~~~-------------------~~~ 59 (106)
T 2dju_A 10 PPIDLVVTET-TATSVTLTWDSGN---SEP-------VTYYGIQYRAAGTEGPFQEVD-------------------GVA 59 (106)
T ss_dssp CCEEEEEEEE-ETTEEEEEEECCC---SSC-------CSEEEEEEEETTCCSCCCCBC-------------------CCC
T ss_pred CCCCcEEEec-cCCEEEEEEcCCC---CCC-------ceEEEEEEEECCCCCCeEEcc-------------------CCC
Confidence 5777776543 3579999998642 110 122356665443221 11000 001
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008312 164 IHHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (570)
Q Consensus 164 ~h~v~ltgL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 202 (570)
...+.|++|+|+|.|.|||...+. +.+|+...++|.+..
T Consensus 60 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~~~~S~~~~~~T~~~~ 101 (106)
T 2dju_A 60 TTRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQS 101 (106)
T ss_dssp SSEEEEESCCTTCEEEEEEEEECSSCBCCCCCCEEEECCCSS
T ss_pred ccEEEEeCCCCCcEEEEEEEEEeCCccCCCcccEEeEcCCCC
Confidence 124578999999999999865432 257788889987654
No 78
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.21 E-value=0.081 Score=44.94 Aligned_cols=90 Identities=17% Similarity=0.181 Sum_probs=51.6
Q ss_pred CCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCeE
Q 008312 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (570)
Q Consensus 85 ~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 164 (570)
.|..+.+... +.+++.|+|.-....... + ....=.|+|....+...... . .+..
T Consensus 31 ~P~~l~~~~~-~~~sv~l~W~~p~~~~~~-----g-~i~~Y~v~~~~~~~~~~~~~------~-------------~~~~ 84 (124)
T 2ed9_A 31 PPQNVSLEVV-NSRSIKVSWLPPPSGTQN-----G-FITGYKIRHRKTTRRGEMET------L-------------EPNN 84 (124)
T ss_dssp CCBSCCEEEE-ETTEEEEECBCCCTTTCC-----S-CCCEEEEEEEESSSSCCEEE------E-------------CSSC
T ss_pred CCeeeEEEEc-CCCEEEEEEECcCCcCCC-----c-EEeEEEEEEEECCCCcceEE------e-------------cCCc
Confidence 4666665433 367999999764321000 0 01123466655443322110 0 1112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMP 200 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p 200 (570)
..+.|++|+|+|.|.+||..-+. +.+|+...|+|+.
T Consensus 85 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 85 LWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp SEEEEECCCSSCEEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred CEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 35688999999999999864332 3678888898864
No 79
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=95.20 E-value=0.12 Score=47.95 Aligned_cols=95 Identities=18% Similarity=0.164 Sum_probs=54.5
Q ss_pred CCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008312 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (570)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 163 (570)
..|.++.+..... ++.|+|.-....-|.. ...=.|+|.......+.... +... ..+.
T Consensus 10 ~~P~~~~~~~~~~--s~~l~W~~p~~~~g~~-------i~~Y~v~~~~~~~~~~~~~~-----~~~~---------~~~~ 66 (209)
T 2vkw_A 10 SSPSIDQVEPYSS--TAQVQFDEPEATGGVP-------ILKYKAEWRAVGEEVWHSKW-----YDAK---------EASM 66 (209)
T ss_dssp CCCEEEEEEECSS--CEEEEEECCSCCCSSC-------CCEEEEEEEESSCCCCEEEE-----EEHH---------HHHH
T ss_pred cCCcccEeeeccC--eEEEEEcCCCcCCCcc-------eeEEEEEEeeCCCCCceEeE-----eecc---------CCCc
Confidence 4588888766553 6999998753211211 12235667655433322211 0000 0011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCC
Q 008312 164 IHHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPD 201 (570)
Q Consensus 164 ~h~v~ltgL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~ 201 (570)
.....|++|+|+|.|.|||...+. +.+|....|+|.+.
T Consensus 67 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~T~~~ 107 (209)
T 2vkw_A 67 EGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 107 (209)
T ss_dssp HSEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECCCS
T ss_pred cceEEeCCCCCCCeEEEEEEEEcCCcccCCcccccccccCC
Confidence 235678999999999999854332 25677778998765
No 80
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.13 E-value=0.13 Score=44.07 Aligned_cols=93 Identities=17% Similarity=0.183 Sum_probs=53.3
Q ss_pred CCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCeE
Q 008312 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (570)
Q Consensus 85 ~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 164 (570)
.|..+++.... .+++.|+|......-|. ...=.|+|........... ... ...-.
T Consensus 30 ~P~~l~~~~~~-~~sv~l~W~~p~~~~g~--------i~~Y~v~~~~~~~~~~~~~---~~~-------------~~~~~ 84 (130)
T 1wfo_A 30 PPMGILFPEVR-TTSVRLIWQPPAAPNGI--------ILAYQITHRLNTTTANTAT---VEV-------------LAPSA 84 (130)
T ss_dssp CCCCCEEEEEC-SSEEEEECCCCSCCCSC--------CCEEEEEEEESSCCCSCCC---EEE-------------ECTTC
T ss_pred CCCceEEEecC-CCEEEEEEcCCCCCCCc--------eEEEEEEEEECCCCCceEE---EEE-------------eCCCc
Confidence 57777766543 68999999764321110 0123456654432111000 000 01123
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---CccceeEEEcCCCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTMPDS 202 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~ 202 (570)
..+.|++|+|+|.|.+||..-+.. .+|+...|+|.+..
T Consensus 85 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 125 (130)
T 1wfo_A 85 RQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRS 125 (130)
T ss_dssp CEEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSSCC
T ss_pred eEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEecCCCC
Confidence 467889999999999998654432 46777889887654
No 81
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=95.08 E-value=0.018 Score=59.49 Aligned_cols=23 Identities=17% Similarity=0.449 Sum_probs=19.0
Q ss_pred HHHHHHHHHcCCeEEEEcccccce
Q 008312 400 VAMEDLLYKYGVDVVFNGHQVHAY 423 (570)
Q Consensus 400 ~~l~~ll~~y~VdlvlsGH~~H~Y 423 (570)
+.++.++..++.++++.|| +|.-
T Consensus 268 ~~~~~fl~~~~~~~IV~GH-t~~~ 290 (342)
T 2z72_A 268 AELDTILQHFNVNHIVVGH-TSQE 290 (342)
T ss_dssp HHHHHHHHHHTCSEEEECS-SCCS
T ss_pred HHHHHHHHHCCCcEEEECC-Cccc
Confidence 4566778888999999999 8864
No 82
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.03 E-value=0.11 Score=44.51 Aligned_cols=95 Identities=14% Similarity=0.047 Sum_probs=51.3
Q ss_pred CCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccC---CCCCceEEEeEEEEeeeecccCCccccc
Q 008312 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTR---RSQLNRKATGRSLVYSQLYPFLGLQNYT 160 (570)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~---~~~~~~~a~g~~~~y~~~~p~~g~~~~~ 160 (570)
..|..+.+.-- ..+++.|+|.-.. .-|.. ...=.|+|... ....+..+.-. . .
T Consensus 19 ~~P~~l~~~~~-~~~sv~l~W~p~~-~~~~~-------i~~Y~v~~~~~~~~~~~~w~~~~~~------~--~------- 74 (124)
T 1wis_A 19 GPPTNLGISNI-GPRSVTLQFRPGY-DGKTS-------ISRWLVEAQVGVVGEGEEWLLIHQL------S--N------- 74 (124)
T ss_dssp CCCEEEEEESC-CSSCEEEEEECCC-CCSSC-------CSEEEEEECBSCCSTTSCCEEEEEE------E--S-------
T ss_pred ccCCCCEEEEe-cCCEEEEEEECCC-CCCCc-------ccEEEEEEEECCCCCCCCCeEeeeE------c--c-------
Confidence 35777776532 3689999995322 11110 12346777652 22222211100 0 0
Q ss_pred cCeEEEEEeCCCCCCCEEEEEEecCCCC---Cccce-eEEEcCCCC
Q 008312 161 SGIIHHVRLTGLKPDTLYHYQCGDPSIP---AMSGT-YCFRTMPDS 202 (570)
Q Consensus 161 ~~~~h~v~ltgL~P~T~Y~Yrvg~~~~~---~~S~~-~~F~T~p~~ 202 (570)
......++|++|+|+|.|.|||...+.. .+|.. ..++|.+.+
T Consensus 75 ~~~~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~~ 120 (124)
T 1wis_A 75 EPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSG 120 (124)
T ss_dssp CTTCSEEEECSCCTTSEECCCCEEECSSCBCCCCCCCCCEECCCSS
T ss_pred CCCceEEEeCCCCCCCEEEEEEEEEECCccCCCcCCccceEcCCCC
Confidence 0112356889999999999998655432 33443 457776654
No 83
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.02 E-value=0.031 Score=47.51 Aligned_cols=37 Identities=22% Similarity=0.122 Sum_probs=27.7
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008312 166 HVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (570)
Q Consensus 166 ~v~ltgL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 202 (570)
+.+|++|+|+|.|.|||...+. +.+|+...++|.+.+
T Consensus 76 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 115 (120)
T 2crm_A 76 EHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPAVS 115 (120)
T ss_dssp EEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCCCCS
T ss_pred EEEECCCCCCCEEEEEEEEEcCCccCCCcccEEEEcCCCC
Confidence 4578999999999999865432 256777778886544
No 84
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.98 E-value=0.1 Score=44.05 Aligned_cols=96 Identities=17% Similarity=0.139 Sum_probs=55.0
Q ss_pred CCceEEEeecCCCCceEEEEEeCcc--cccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccC
Q 008312 85 EPEQISVSLSSAHDSVWISWITGEF--QIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (570)
Q Consensus 85 ~P~qi~lt~~~~p~s~~I~W~T~~~--~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 162 (570)
.|..+++... +.+++.|+|.-... .-|. ...=.|+|.......... +.. .. ....+
T Consensus 18 ~P~~~~~~~~-~~~sv~l~W~~p~~~~~~g~--------i~~Y~v~~~~~~~~~~~~-------~~~----~~--~~~~~ 75 (122)
T 1va9_A 18 PPMDVTLQPV-TSQSIQVTWKAPKKELQNGV--------IRGYQIGYRENSPGSNGQ-------YSI----VE--MKATG 75 (122)
T ss_dssp CCEEEEEEEC-SSSEEEEEEECCCSSTTCSC--------CCEEEEEEEESSTTSCCS-------CBC----CB--CCCCS
T ss_pred CCcceEEEec-cCCEEEEEEeCCCCcCCCCc--------EeEEEEEEEECCCCCCcc-------eEE----EE--EecCC
Confidence 5778877543 36899999987542 1110 112345555443221100 000 00 00123
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008312 163 IIHHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (570)
Q Consensus 163 ~~h~v~ltgL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 202 (570)
-...+.|+||+|+|.|.+||..-+. +.+|+...|+|....
T Consensus 76 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 118 (122)
T 1va9_A 76 DSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLESG 118 (122)
T ss_dssp SEEEEEEESCCSSCCEEEEEEEEETTEECCCCCCEECCCCSSC
T ss_pred ceeEEEeCCCCCCCEEEEEEEEEcCCCCCCCccCEEEEeCCCC
Confidence 3567889999999999999864332 357888889887543
No 85
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.81 E-value=0.16 Score=43.59 Aligned_cols=38 Identities=16% Similarity=0.198 Sum_probs=29.5
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCC
Q 008312 164 IHHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPD 201 (570)
Q Consensus 164 ~h~v~ltgL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~ 201 (570)
...++|+||+|+|.|.+||...+. +.+|+...|+|.+.
T Consensus 76 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 116 (132)
T 1x5h_A 76 QLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFES 116 (132)
T ss_dssp CCEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCccCCCCcCEEeEcCcc
Confidence 346788999999999999865432 25788889999764
No 86
>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}
Probab=94.78 E-value=0.23 Score=41.71 Aligned_cols=39 Identities=23% Similarity=0.299 Sum_probs=28.4
Q ss_pred EEEEeCCCCCCCEEEEEEecCC--CCCccceeEEEcCCCCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPS--IPAMSGTYCFRTMPDSS 203 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~--~~~~S~~~~F~T~p~~~ 203 (570)
..+.|+||+|+|.|.++|.... ....+....++|.|.+.
T Consensus 59 t~~~i~gL~PgT~Y~~~V~A~~~~~~~~p~~~~~~T~p~p~ 99 (104)
T 2dle_A 59 PRAVIPGLRSSTFYNITVCPVLGDIEGTPGFLQVHTPPVPS 99 (104)
T ss_dssp SEEECCSCCSSCEEEEEEEEESSSCCCBCEEEEEECCCCSC
T ss_pred CEEEECCCCCCCEEEEEEEEEECCcccCCeeEEEEccCCCC
Confidence 3678999999999999986533 22445567788887654
No 87
>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1
Probab=94.77 E-value=0.15 Score=40.70 Aligned_cols=20 Identities=25% Similarity=0.502 Sum_probs=16.6
Q ss_pred EEEeCCCCCCCEEEEEEecC
Q 008312 166 HVRLTGLKPDTLYHYQCGDP 185 (570)
Q Consensus 166 ~v~ltgL~P~T~Y~Yrvg~~ 185 (570)
...+++|+|+++|+|||..-
T Consensus 52 ~~~~~~L~~~t~Y~~~V~A~ 71 (88)
T 1k85_A 52 TATISGLAADTSYTFTVKAK 71 (88)
T ss_dssp EEEECCCCSSCEEEEEEEEE
T ss_pred EEEeCCCCCCCEEEEEEEEE
Confidence 34689999999999998653
No 88
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=94.77 E-value=0.02 Score=58.79 Aligned_cols=38 Identities=18% Similarity=0.141 Sum_probs=24.2
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCCccc
Q 008312 209 SRIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTY 246 (570)
Q Consensus 209 ~rf~vigD~g~~~~~-~~~i~~l~~~~pDfvl~~GDl~Y 246 (570)
.++.++||+|..... ...++.+.....+-+|++||++.
T Consensus 57 ~~i~viGDIHG~~~~L~~ll~~~g~~~~~~~vflGD~VD 95 (330)
T 1fjm_A 57 APLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVD 95 (330)
T ss_dssp SSEEEECBCTTCHHHHHHHHHHHCSTTSSCEEECSCCSS
T ss_pred CceEEecCCCCCHHHHHHHHHHhCCCCcceEEeCCCcCC
Confidence 368999999975321 11222222234577999999995
No 89
>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.75 E-value=0.2 Score=41.74 Aligned_cols=87 Identities=17% Similarity=0.205 Sum_probs=50.0
Q ss_pred CCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008312 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (570)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 163 (570)
..|..+.++--. .+++.|+|.-.... ...=.|+|....+. ...+ . . .+-
T Consensus 9 ~~P~~l~v~~~~-~~sv~lsW~~p~~~-----------i~~Y~i~y~~~~~~-~~~~-------~-~----------~~~ 57 (105)
T 2cum_A 9 EAPRDLEAKEVT-PRTALLTWTEPPVR-----------PAGYLLSFHTPGGQ-TQEI-------L-L----------PGG 57 (105)
T ss_dssp CCCEEEEEESCC-SSCEEEEEECCSSC-----------CSEEEEEEECTTSC-EEEE-------E-E----------CSS
T ss_pred CCCCceEEEecc-CCEEEEEEcCCCCc-----------cceEEEEEEeCCCc-eEEE-------E-E----------CCC
Confidence 357777765433 68999999753211 01235677654321 1100 0 0 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCc--cceeEEEcCCC
Q 008312 164 IHHVRLTGLKPDTLYHYQCGDPSIPAM--SGTYCFRTMPD 201 (570)
Q Consensus 164 ~h~v~ltgL~P~T~Y~Yrvg~~~~~~~--S~~~~F~T~p~ 201 (570)
...++|+||+|+|.|.++|..-+..+. .....|+|...
T Consensus 58 ~ts~~l~~L~p~t~Y~~~V~A~~~~g~s~~~~~~~~T~~~ 97 (105)
T 2cum_A 58 ITSHQLLGLFPSTSYNARLQAMWGQSLLPPVSTSFTTGGL 97 (105)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEBTTBCCCCEEEEEECCCS
T ss_pred ccEEEECCCCCCCEEEEEEEEEeCCcccCCEEEEEEeCCc
Confidence 236789999999999999865432333 34567888644
No 90
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.74 E-value=0.058 Score=45.47 Aligned_cols=38 Identities=18% Similarity=0.203 Sum_probs=29.4
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCCC
Q 008312 166 HVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDSS 203 (570)
Q Consensus 166 ~v~ltgL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~~ 203 (570)
..+|+||+|+|.|.|||...+. +.+|+...|+|.+.+.
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p~ 106 (110)
T 2db8_A 66 MCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEGSG 106 (110)
T ss_dssp CEEEECCCSSSCCEEEEEEECSSCBCCCCSCEECCCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCcCCCCCCCEEEEcCCCCC
Confidence 3568899999999999864442 2578888999987654
No 91
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.71 E-value=0.11 Score=44.97 Aligned_cols=36 Identities=19% Similarity=0.225 Sum_probs=27.0
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC--CccceeEEEcCCC
Q 008312 166 HVRLTGLKPDTLYHYQCGDPSIP--AMSGTYCFRTMPD 201 (570)
Q Consensus 166 ~v~ltgL~P~T~Y~Yrvg~~~~~--~~S~~~~F~T~p~ 201 (570)
..+|+||+|+|.|.|||...+.. ..|+...++|.+.
T Consensus 81 ~~~v~gL~p~t~Y~frV~A~N~~G~~~S~~v~~~T~~~ 118 (127)
T 2dmk_A 81 HYTVHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTNSQ 118 (127)
T ss_dssp EEEEESCCSSCEEEEEEEEEESSCEEECCCEEEECCSS
T ss_pred eEEECCCCCCCEEEEEEEEEeCCCCCCCcCeEeEeCCC
Confidence 34788999999999998644322 4667888888764
No 92
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=94.61 E-value=0.23 Score=44.99 Aligned_cols=76 Identities=12% Similarity=0.149 Sum_probs=44.1
Q ss_pred CCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCeE
Q 008312 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (570)
Q Consensus 85 ~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 164 (570)
.|..+++.-. ..+++.|+|......-|.. ...=.|+|............-.. ..
T Consensus 8 ~P~~l~~~~~-~~~sv~l~W~~p~~~~~~~-------i~~Y~v~~~~~~~~~~~~~~~~~------------------~~ 61 (197)
T 3lpw_A 8 PPQDLKVKEV-TKTSVTLTWDPPLLDGGSK-------IKNYIVEKRESTRKAYSTVATNC------------------HK 61 (197)
T ss_dssp CCEEEEEEEE-CSSCEEEEEECCSCCTTSC-------CCEEEEEEEETTCSSCEEEEEEE------------------CS
T ss_pred CCCCcEEEEe-cCCEEEEEEcCCccCCCCc-------ccEEEEEEEECCCCccEEeecCC------------------Cc
Confidence 5777776533 3689999998753211110 11235666665443332221110 11
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPS 186 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~ 186 (570)
..+.|++|+|+|.|.|||...+
T Consensus 62 ~~~~~~~L~p~t~Y~~~V~a~~ 83 (197)
T 3lpw_A 62 TSWKVDQLQEGCSYYFRVLAEN 83 (197)
T ss_dssp SEEEECCCCTTCEEEEEEEEEE
T ss_pred cEEEEcCCCCCCEEEEEEEEEc
Confidence 3467899999999999986444
No 93
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.57 E-value=0.36 Score=40.40 Aligned_cols=38 Identities=16% Similarity=0.093 Sum_probs=29.1
Q ss_pred EEEEeCCCCCCCEEEEEEecCC---CCCccceeEEEcCCCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRTMPDS 202 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~p~~ 202 (570)
..+.|++|+|+|.|.+||..-+ .+.+|+...|+|.+..
T Consensus 76 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 116 (121)
T 2dlh_A 76 QITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGS 116 (121)
T ss_dssp SEECCBSCCSSCEEEEEEEEEESSCBCCCCCCEEEECCCCC
T ss_pred eEEEecCCCCCCEEEEEEEEEeCCccCCCCCCEEEECCCCC
Confidence 4568999999999999985432 2357888899997653
No 94
>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.51 E-value=0.17 Score=42.77 Aligned_cols=37 Identities=19% Similarity=0.108 Sum_probs=26.2
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC--CccceeEEEcCCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPSIP--AMSGTYCFRTMPD 201 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~~~--~~S~~~~F~T~p~ 201 (570)
..+.|+||+|+|.|.++|..-+.. .......|+|.+.
T Consensus 59 t~~~l~~L~P~t~Y~~~V~A~~~~~~s~~~~~~~~T~~~ 97 (115)
T 2cuh_A 59 VDYPLHDLVLHTNYTATVRGLRGPNLTSPASITFTTGLE 97 (115)
T ss_dssp SEEEECSCCSSSEEEEEEEEEETTEECCCEEEEEESCCC
T ss_pred cEEEEeCCCCCCEEEEEEEEEeCCCcCCCEEEEEEeCCC
Confidence 357899999999999998654322 2234567888754
No 95
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=94.49 E-value=0.11 Score=44.26 Aligned_cols=78 Identities=22% Similarity=0.288 Sum_probs=42.6
Q ss_pred CCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCC-CCCceEEEeEEEEeeeecccCCccccccC
Q 008312 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRR-SQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (570)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~-~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 162 (570)
..|..+.+.-- ..+++.|+|.-. ..|.. + ...=.|+|.... +..+..+... . .+
T Consensus 19 ~~P~~~~~~~~-~~~sv~l~W~p~--~~~~~--~----i~~Y~v~~~~~~~~~~w~~~~~~---~-------------~~ 73 (121)
T 1x4z_A 19 EAPDRPTISTA-SETSVYVTWIPR--GNGGF--P----IQSFRVEYKKLKKVGDWILATSA---I-------------PP 73 (121)
T ss_dssp CCCCCCEEEEC-CSSEEEEECCCC--CCTTS--C----CCEEEEEEEESSSCCCCEEEEEE---E-------------CT
T ss_pred ccCCCCEEEEc-cCCEEEEEEECC--CCCCC--c----ceEEEEEEEECCCCCceEEeecc---c-------------CC
Confidence 35666666543 368999999832 11110 0 022356776654 2222221110 0 11
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCC
Q 008312 163 IIHHVRLTGLKPDTLYHYQCGDPS 186 (570)
Q Consensus 163 ~~h~v~ltgL~P~T~Y~Yrvg~~~ 186 (570)
-...++|++|+|+|.|.|||...+
T Consensus 74 ~~~~~~v~~L~p~t~Y~frV~A~n 97 (121)
T 1x4z_A 74 SRLSVEITGLEKGISYKFRVRALN 97 (121)
T ss_dssp TCCEEEEESCCTTCEEEEEEEEEE
T ss_pred CcCEEEECCCCCCCEEEEEEEEEc
Confidence 124567899999999999986544
No 96
>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic}
Probab=94.48 E-value=0.13 Score=42.42 Aligned_cols=78 Identities=23% Similarity=0.240 Sum_probs=44.9
Q ss_pred CCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCC-ceEEEeEEEEeeeecccCCccccccCe
Q 008312 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQL-NRKATGRSLVYSQLYPFLGLQNYTSGI 163 (570)
Q Consensus 85 ~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~-~~~a~g~~~~y~~~~p~~g~~~~~~~~ 163 (570)
.|..+.++- -+.+++.|+|...... ...=.|+|....... .... .. .+-
T Consensus 4 ~P~~l~v~~-~t~~Sv~lsW~~p~~~-----------i~~Y~v~y~~~~~~~~~~~~-----~~-------------~~~ 53 (98)
T 3tes_A 4 APKNLVVSE-VTEDSLRLSWTAPDAA-----------FDSFMIQYQESEKVGEAINL-----TV-------------PGS 53 (98)
T ss_dssp CCEEEEEES-CCSSCEEEEEECCTTS-----------CSEEEEEEEETTBCSCCEEE-----EE-------------ETT
T ss_pred CCCceEEEe-cCCCeEEEEecCCcCc-----------cceEEEEEEECCCCCceEEE-----Ec-------------CCC
Confidence 477777753 3468999999864311 112356776543211 1110 00 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCccc
Q 008312 164 IHHVRLTGLKPDTLYHYQCGDPSIPAMSG 192 (570)
Q Consensus 164 ~h~v~ltgL~P~T~Y~Yrvg~~~~~~~S~ 192 (570)
.-.+.|+||+|+|.|.++|...+..+.|+
T Consensus 54 ~t~~~l~gL~P~t~Y~~~V~A~~~~g~S~ 82 (98)
T 3tes_A 54 ERSYDLTGLKPGTEYTVSIYGVKGGHRSN 82 (98)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEETTEEBC
T ss_pred cCEEEECCCCCCCEEEEEEEEEeCCcccC
Confidence 23578999999999999987654334444
No 97
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=94.48 E-value=0.46 Score=43.99 Aligned_cols=95 Identities=23% Similarity=0.290 Sum_probs=52.0
Q ss_pred CCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008312 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (570)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 163 (570)
..|..+.+.-.. .+++.|+|.-.....+.... ....=.|+|............. ..-
T Consensus 6 ~~P~~l~~~~~~-~~si~l~W~~p~~~~~~~~~----~i~~Y~v~~~~~~~~~~~~~~~------------------~~~ 62 (211)
T 3p4l_A 6 MPPVGVQASILS-HDTIRITWADNSLPKHQKIT----DSRYYTVRWKTNIPANTKYKNA------------------NAT 62 (211)
T ss_dssp CCCEEEEEEECS-SSCEEEEEECTTSCTTCCCC----SSCEEEEEEEECC---CCCEEE------------------EES
T ss_pred CCCCCEEEEecC-CCeEEEEEeCCCCCcccccC----CCcEEEEEEEECCCCcceEEEe------------------CCC
Confidence 357888775443 68999999863211000000 0112346665433221110000 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCC
Q 008312 164 IHHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPD 201 (570)
Q Consensus 164 ~h~v~ltgL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~ 201 (570)
...+.|++|+|+|.|.+||..-+. +.+|....|+|.+.
T Consensus 63 ~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~~ 103 (211)
T 3p4l_A 63 TLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 103 (211)
T ss_dssp SSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred ceEEEecCcCCCCEEEEEEEEEcCCCCCccceeEeeecccC
Confidence 235678999999999999864332 25677888998654
No 98
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.47 E-value=0.35 Score=39.66 Aligned_cols=87 Identities=16% Similarity=0.207 Sum_probs=48.4
Q ss_pred CCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCeE
Q 008312 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (570)
Q Consensus 85 ~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 164 (570)
.|. +.+... +.+++.|+|.-....-|. ...=.|+|............ . ..-.
T Consensus 10 ~p~-~~v~~~-~~~sv~l~W~~p~~~~g~--------i~~Y~v~~~~~~~~~~~~~~-----~-------------~~~~ 61 (107)
T 2dn7_A 10 RPT-MMISTT-AMNTALLQWHPPKELPGE--------LLGYRLQYCRADEARPNTID-----F-------------GKDD 61 (107)
T ss_dssp CCE-EEEEEC-STTEEEEEEECCSSCSSC--------CCEEEEEEEETTCSSCEEEE-----E-------------ETTC
T ss_pred CCc-EeEEec-CCCEEEEEECCCCCCCCc--------eeEEEEEEEECCCCCCEEEE-----e-------------CCCc
Confidence 344 555544 568999999874321110 12235677655433222210 0 0112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---CccceeEEEcCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTMP 200 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p 200 (570)
.+++|++|+|+|.|.+||..-+.. .+|. ..|+|..
T Consensus 62 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~-~~~~T~~ 99 (107)
T 2dn7_A 62 QHFTVTGLHKGTTYIFRLAAKNRAGLGEEFE-KEIRTPE 99 (107)
T ss_dssp CEEEEECCCTTCEEEEEEEEEETTEEEEEEE-EEEECCC
T ss_pred cEEEeCCCCCCCEEEEEEEEEcCCcccCCee-eEEeCCC
Confidence 356789999999999998654433 3444 4577754
No 99
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C
Probab=94.46 E-value=0.24 Score=41.10 Aligned_cols=89 Identities=15% Similarity=0.078 Sum_probs=49.5
Q ss_pred CCCceEEEeecCCCCceEEEEEeCcc--cccCCCCCCCCCCCccEEEEccCCCCC--ceEEEeEEEEeeeecccCCcccc
Q 008312 84 FEPEQISVSLSSAHDSVWISWITGEF--QIGNNLKPLDPKSVVSVVRYGTRRSQL--NRKATGRSLVYSQLYPFLGLQNY 159 (570)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~I~W~T~~~--~~g~~~~~~~p~~~~~~V~yg~~~~~~--~~~a~g~~~~y~~~~p~~g~~~~ 159 (570)
..|..+.+.-- +.+++.|+|.-... ..|. ...=.|.|....... .... ... .+
T Consensus 6 ~~P~~~~~~~~-s~tsi~v~W~~p~~~~~ng~--------i~gY~v~y~~~~~~~~~~~~~----~~v------~~---- 62 (102)
T 3n1f_C 6 TGPHIAYTEAV-SDTQIMLKWTYIPSSNNNTP--------IQGFYIYYRPTDSDNDSDYKR----DVV------EG---- 62 (102)
T ss_dssp SCCEEEEEEEC-SSSCEEEEEECCC-----CC--------CCEEEEEEEETTCCCGGGCEE----EEE------ET----
T ss_pred CCCceeEEEEc-CCCEEEEEeECCChhhcCCc--------cceEEEEEEECCCCCCCceEE----EEE------cC----
Confidence 45777777543 36899999986432 1110 012356776644321 1100 000 01
Q ss_pred ccCeEEEEEeCCCCCCCEEEEEEecCC---CCCccceeEEEc
Q 008312 160 TSGIIHHVRLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRT 198 (570)
Q Consensus 160 ~~~~~h~v~ltgL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T 198 (570)
-..+++|++|+|+|.|.++|..-+ .+..|+...++|
T Consensus 63 ---~~~~~~l~~L~p~t~Y~v~V~A~n~~G~G~~S~~~~~~T 101 (102)
T 3n1f_C 63 ---SKQWHMIGHLQPETSYDIKMQCFNEGGESEFSNVMICET 101 (102)
T ss_dssp ---TCSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred ---CceEEECCCCCCCCEEEEEEEEECCCcCCCCCCCEEeec
Confidence 112468999999999999985432 125666777776
No 100
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=94.45 E-value=0.47 Score=43.95 Aligned_cols=103 Identities=12% Similarity=0.095 Sum_probs=57.1
Q ss_pred CCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCeE
Q 008312 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (570)
Q Consensus 85 ~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 164 (570)
.|.++.+.-.. .+++.|+|.-... . ....=.|+|....+....... .. ..-.
T Consensus 25 ~P~~l~~~~~~-~~sv~lsW~~p~~---~-------~i~~Y~v~~~~~~~~~~~~~~----~~-------------~~~~ 76 (203)
T 2gee_A 25 QPTDLSFVDIT-DSSIGLRWTPLNS---S-------TIIGYRITVVAAGEGIPIFED----FV-------------DSSV 76 (203)
T ss_dssp CCEEEEEECCT-TTCEEEEEECCSS---S-------SCCEEEEEEEESSSSSCCEEE----EE-------------ETTC
T ss_pred CCCccEEEecC-CCEEEEEecCCCC---C-------CccEEEEEEEECCCCCCceeE----Ec-------------CCCc
Confidence 57777665433 6899999986431 1 012235666654433221110 00 0112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCccceeEEEcCCCCCCCCCCeEEEEEec
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPSIPAMSGTYCFRTMPDSSSTSYPSRIAIVGD 216 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p~~~~~~~~~rf~vigD 216 (570)
..+.|+||+|+|.|.++|..-+..+.|....++|...+... ..+++..+++
T Consensus 77 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~t~~~~p~P-~~l~~~~~~~ 127 (203)
T 2gee_A 77 GYYTVTGLEPGIDYDISVYTVKNGGESTPTTLTQQTAVPPP-TDLRFTNIGP 127 (203)
T ss_dssp CEEEECSCCTTCEEEEEEEEESSSCBCCCEEEEEECCCCCC-EEEEEEEEET
T ss_pred cEEEeCCCCCCCEEEEEEEEEeCCCccccEeeeecCCCcCC-CceEEEEcCC
Confidence 35678999999999999976554466666666654333221 2345544444
No 101
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Probab=94.44 E-value=0.044 Score=46.06 Aligned_cols=38 Identities=37% Similarity=0.401 Sum_probs=31.4
Q ss_pred EEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCCCC
Q 008312 167 VRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDSSS 204 (570)
Q Consensus 167 v~ltgL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~~~ 204 (570)
++|+||+|+|.|.+||...+. +.+|+...|+|.+.+++
T Consensus 64 ~~i~~L~p~t~Y~f~V~A~~~~G~g~~S~~~~~~T~~~~gp 104 (107)
T 1x5a_A 64 VLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPPSGP 104 (107)
T ss_dssp EEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCCCSCC
T ss_pred EEECCCCCCCEEEEEEEEECCCccCCCCCCEEEEECCCCCC
Confidence 789999999999999865432 36888999999987665
No 102
>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.42 E-value=0.32 Score=40.65 Aligned_cols=88 Identities=13% Similarity=-0.006 Sum_probs=52.7
Q ss_pred CCCceEEEeec-CCCCceEEEEEeCcc---cccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCcccc
Q 008312 84 FEPEQISVSLS-SAHDSVWISWITGEF---QIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNY 159 (570)
Q Consensus 84 ~~P~qi~lt~~-~~p~s~~I~W~T~~~---~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~ 159 (570)
..|..+.+... ++++++.|+|..... ..+ ....=.|+|....+.....+..
T Consensus 9 ~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~--------~~l~Y~v~y~~~~~~~w~~~~~----------------- 63 (109)
T 1uc6_A 9 DPPENVVARPVPSNPRRLEVTWQTPSTWPDPES--------FPLKFFLRYRPLILDQWQHVEL----------------- 63 (109)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCTTT--------TTBCEEEEEEESSSCCCCCEEE-----------------
T ss_pred CCCcceEEEEcCCCCCEEEEEECCCCCccCCCc--------EEEEEEEEEEECCCCCcEEEec-----------------
Confidence 46888888764 456899999987532 001 0123567887665432221110
Q ss_pred ccCeEEEEEeCCCCCCCEEEEEEecCCC--C---CccceeEEEc
Q 008312 160 TSGIIHHVRLTGLKPDTLYHYQCGDPSI--P---AMSGTYCFRT 198 (570)
Q Consensus 160 ~~~~~h~v~ltgL~P~T~Y~Yrvg~~~~--~---~~S~~~~F~T 198 (570)
. ....+.|.+|+|+|.|.+||..... + .||+...++|
T Consensus 64 ~--~~~~~~l~~L~p~t~Y~~~VRa~~~g~g~wS~WS~~~~~~~ 105 (109)
T 1uc6_A 64 S--NGTAHTITDAYAGKEYIIQVAAKDNEIGTWSDWSVAAHATP 105 (109)
T ss_dssp S--SCSEEEETTCCSSSCEEEEEECCBSSSCCCCCCCEEEEECC
T ss_pred c--cCCEEEEeCCCCCCEEEEEEEEEeCCCCCcCcCCCCeeeee
Confidence 0 0125578999999999999976531 1 4555555554
No 103
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}
Probab=94.39 E-value=0.22 Score=42.25 Aligned_cols=82 Identities=10% Similarity=0.075 Sum_probs=45.7
Q ss_pred CCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCeE
Q 008312 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (570)
Q Consensus 85 ~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 164 (570)
.|..+.+.-- ..+++.|+|.-....-|..+ ..=.|+|.......+..+... ...
T Consensus 20 ~P~~l~~~~~-~~~sv~l~W~~p~~~gg~~i-------~~Y~v~~~~~~~~~w~~~~~~------------------~~~ 73 (120)
T 2yux_A 20 PPQIVKIEDV-WGENVALTWTPPKDDGNAAI-------TGYTIQKADKKSMEWFTVIEH------------------YHR 73 (120)
T ss_dssp CCSCEEEEEE-ETTEEEEEECCCSCCCSSCC-------CCCCEEEEETTTCCCEEEESS------------------CCS
T ss_pred cCCCCEEEEe-cCCEEEEEEcCCCcCCCCCc-------eEEEEEEEECCCCceEEeeec------------------CCc
Confidence 5777766432 35799999976432111111 122467765543333222100 011
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCccc
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPSIPAMSG 192 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~~~~~S~ 192 (570)
..+.|++|+|+|.|.|||...+..+.|+
T Consensus 74 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~ 101 (120)
T 2yux_A 74 TSATITELVIGNEYYFRVFSENMCGLSE 101 (120)
T ss_dssp SCCEECCCCSSEEEEEEECCCSSSCSCS
T ss_pred CEEEECCCCCCCEEEEEEEEeeCCcCCC
Confidence 2347899999999999998766444443
No 104
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}
Probab=94.26 E-value=0.14 Score=43.78 Aligned_cols=37 Identities=30% Similarity=0.400 Sum_probs=28.7
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008312 166 HVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (570)
Q Consensus 166 ~v~ltgL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 202 (570)
.++|++|+|+|+|.+||...+. +.+|+...|+|.|..
T Consensus 68 ~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~t~~~~ 107 (122)
T 2e3v_A 68 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVR 107 (122)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCCC
T ss_pred eEEeCCCCCCCEEEEEEEEEeCCccCCCcccccccccCCC
Confidence 5688999999999999865432 367788888887754
No 105
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=94.21 E-value=0.17 Score=46.01 Aligned_cols=89 Identities=20% Similarity=0.113 Sum_probs=49.0
Q ss_pred CCCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccC
Q 008312 83 GFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (570)
Q Consensus 83 ~~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 162 (570)
...|..+.+.- -+.+++.|+|.-.. |. ...=.|+|....+....... . .+
T Consensus 95 p~~P~~l~~~~-~~~~sv~l~W~~p~---~~--------i~~Y~v~~~~~~~~~~~~~~-----~-------------~~ 144 (186)
T 1qr4_A 95 VGSPKGISFSD-ITENSATVSWTPPR---SR--------VDSYRVSYVPITGGTPNVVT-----V-------------DG 144 (186)
T ss_dssp CCCCSCEEEES-CCSSCEEEEECCCS---SC--------CSEEEEEEEETTCCCCEEEE-----E-------------ET
T ss_pred CCCCCccEEEE-eCCCEEEEEEECCC---Cc--------ccEEEEEEEeCCCCCceEEE-----c-------------CC
Confidence 34677777653 24689999997532 11 12235666554332111110 0 01
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCCCCccc--eeEEEcCCC
Q 008312 163 IIHHVRLTGLKPDTLYHYQCGDPSIPAMSG--TYCFRTMPD 201 (570)
Q Consensus 163 ~~h~v~ltgL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~p~ 201 (570)
-...+.|+||+|+|.|.++|...+..+.|+ ...|+|.|.
T Consensus 145 ~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~pd 185 (186)
T 1qr4_A 145 SKTRTKLVKLVPGVDYNVNIISVKGFEESEPISGILKTALD 185 (186)
T ss_dssp TCCEEEECSCCSSCEEEEEEEEEETTEECCCEEEEEEC---
T ss_pred CcCEEEEcCCCCCCEEEEEEEEEcCCCcCcCEEEEEEecCC
Confidence 124568899999999999986544334443 556777664
No 106
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.15 E-value=0.28 Score=41.21 Aligned_cols=37 Identities=16% Similarity=0.203 Sum_probs=28.1
Q ss_pred EEEeCCCCCCCEEEEEEecCC---CCCccceeEEEcCCCC
Q 008312 166 HVRLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRTMPDS 202 (570)
Q Consensus 166 ~v~ltgL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~p~~ 202 (570)
.+.|++|+|+|.|.|||...+ .+.+|+...|+|.+.+
T Consensus 74 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 113 (118)
T 1x3d_A 74 QFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGCS 113 (118)
T ss_dssp EEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECSCCC
T ss_pred EEEeCCCCCCCEEEEEEEEEECCCCCCCccCEEEEcCCCC
Confidence 457899999999999985433 2367788889987654
No 107
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=94.10 E-value=0.052 Score=55.27 Aligned_cols=21 Identities=14% Similarity=0.287 Sum_probs=18.0
Q ss_pred HHHHHHHHHHcCCeEEEEccc
Q 008312 399 RVAMEDLLYKYGVDVVFNGHQ 419 (570)
Q Consensus 399 r~~l~~ll~~y~VdlvlsGH~ 419 (570)
.+..++.++++++++++=|||
T Consensus 233 ~~~~~~fl~~n~l~~iiR~Hq 253 (315)
T 3h63_A 233 PDVTKAFLEENNLDYIIRSHE 253 (315)
T ss_dssp HHHHHHHHHHHTCSEEEECCS
T ss_pred HHHHHHHHHHcCCcEEEEece
Confidence 356778999999999999993
No 108
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=94.02 E-value=0.037 Score=55.92 Aligned_cols=21 Identities=24% Similarity=0.393 Sum_probs=18.3
Q ss_pred HHHHHHHHHHcCCeEEEEccc
Q 008312 399 RVAMEDLLYKYGVDVVFNGHQ 419 (570)
Q Consensus 399 r~~l~~ll~~y~VdlvlsGH~ 419 (570)
.+..++.++++++++++=|||
T Consensus 228 ~~~~~~fl~~n~l~~IiR~Hq 248 (299)
T 3e7a_A 228 AEVVAKFLHKHDLDLICRAHQ 248 (299)
T ss_dssp HHHHHHHHHHHTCSEEEECCS
T ss_pred HHHHHHHHHHCCCeEEEEcCe
Confidence 367788999999999999993
No 109
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=94.00 E-value=0.22 Score=45.20 Aligned_cols=88 Identities=16% Similarity=0.061 Sum_probs=51.1
Q ss_pred CCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008312 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (570)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 163 (570)
..|..+.+.-- ..+++.|+|.-.... ...=.|+|....+. ... ... . +-
T Consensus 8 ~~P~~l~~~~~-~~~sv~l~W~~p~~~-----------i~~Y~v~~~~~~~~-~~~-----~~~------~-------~~ 56 (186)
T 1qr4_A 8 DNPKDLEVSDP-TETTLSLRWRRPVAK-----------FDRYRLTYVSPSGK-KNE-----MEI------P-------VD 56 (186)
T ss_dssp CCCEEEEEESC-CSSEEEEEEECCSSC-----------CSEEEEEEECTTCC-EEE-----EEE------C-------TT
T ss_pred cCCCceEEEec-CCCEEEEEEeCCCCC-----------ccEEEEEEEeCCCC-eeE-----EEC------C-------CC
Confidence 46888877643 368999999864211 12335667643221 110 000 0 11
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCccc--eeEEEcCCCC
Q 008312 164 IHHVRLTGLKPDTLYHYQCGDPSIPAMSG--TYCFRTMPDS 202 (570)
Q Consensus 164 ~h~v~ltgL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~p~~ 202 (570)
...+.|+||+|+|.|.|+|...+....|. ...++|.|.+
T Consensus 57 ~~~~~i~~L~p~t~Y~~~V~a~~~~~~s~~~~~~~~t~p~~ 97 (186)
T 1qr4_A 57 STSFILRGLDAGTEYTISLVAEKGRHKSKPTTIKGSTVVGS 97 (186)
T ss_dssp CSEEEEESCCSSCEEEEEEEEESSSCBCCCEEEEEECCCCC
T ss_pred CCEEEECCCCCCCEEEEEEEEEcCCccCCCEEEEEECCCCC
Confidence 23457899999999999986554344444 5667776544
No 110
>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.97 E-value=0.31 Score=39.25 Aligned_cols=36 Identities=19% Similarity=0.095 Sum_probs=25.0
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCccc--eeEEEcC
Q 008312 164 IHHVRLTGLKPDTLYHYQCGDPSIPAMSG--TYCFRTM 199 (570)
Q Consensus 164 ~h~v~ltgL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~ 199 (570)
...+.|+||+|+|.|.++|..-+..+.|. ...++|.
T Consensus 54 ~~~~~l~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~ 91 (94)
T 1j8k_A 54 EDTAELQGLRPGSEYTVSVVALHDDMESQPLIGTQSTA 91 (94)
T ss_dssp CCEEEECSCCCCSEEEEEEEECSSSCCCCCEEEEEECC
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCCcCCCEEeEEEec
Confidence 34678999999999999997655333333 3445554
No 111
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.85 E-value=0.13 Score=43.56 Aligned_cols=38 Identities=26% Similarity=0.214 Sum_probs=29.0
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 202 (570)
..+.|+||+|+|.|.+||..-+. +.+|+...|+|.+..
T Consensus 80 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 120 (125)
T 1uen_A 80 THGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGS 120 (125)
T ss_dssp SEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCCC
T ss_pred cEEEeCCCCCCCEEEEEEEEecCCCCCCCCCCEEEECCCCC
Confidence 46788999999999999854332 257788899997653
No 112
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=93.85 E-value=0.43 Score=45.19 Aligned_cols=89 Identities=16% Similarity=0.193 Sum_probs=53.1
Q ss_pred CCCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccC
Q 008312 83 GFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (570)
Q Consensus 83 ~~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 162 (570)
...|..+.+.-.. .+++.|+|.-.. |. ...=.|+|....+....... .. .
T Consensus 6 ~~~P~~l~~~~~~-~~si~l~W~~p~---g~--------i~~Y~v~~~~~~~~~~~~~~-----~~-------------~ 55 (234)
T 3f7q_A 6 LGAPQNPNAKAAG-SRKIHFNWLPPS---GK--------PMGYRVKYWIQGDSESEAHL-----LD-------------S 55 (234)
T ss_dssp CCCCEEEEEEECS-SSCEEEEEECCS---SC--------CCEEEEEEEETTSCGGGCEE-----EE-------------E
T ss_pred CCCCcceEEEEcC-CCEEEEEEECCC---Cc--------cceEEEEEEECCCCccceEE-----Ec-------------C
Confidence 3468888776443 689999998642 10 12235666654332211100 00 0
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCC
Q 008312 163 IIHHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPD 201 (570)
Q Consensus 163 ~~h~v~ltgL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~ 201 (570)
....+.|+||+|+|.|.++|..-+. +.+|....|+|...
T Consensus 56 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~~T~~~ 97 (234)
T 3f7q_A 56 KVPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQE 97 (234)
T ss_dssp SSSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred CccEEEECCCCCCCEEEEEEEEEeCCCcCCCCCeEEEEcCCC
Confidence 1235678999999999999854332 24677888988744
No 113
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=93.78 E-value=0.088 Score=44.01 Aligned_cols=78 Identities=10% Similarity=0.045 Sum_probs=42.6
Q ss_pred CCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008312 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (570)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 163 (570)
..|..+.+.-.. .+++.|+|.-....-|.. ...=.|+|.......+..+. . ...-
T Consensus 10 ~~P~~l~~~~~~-~~sv~l~W~~p~~~~~~~-------i~~Y~v~~~~~~~~~w~~~~-------~----------~~~~ 64 (111)
T 1x5y_A 10 SAPQHLTVEDVT-DTTTTLKWRPPDRIGAGG-------IDGYLVEYCLEGSEEWVPAN-------K----------EPVE 64 (111)
T ss_dssp CCCEEEEEEEEC-SSEEEEEEECCSCCCSSC-------CCEEEEEEEETTCCCCEESS-------S----------SCBS
T ss_pred cCCCCCEEEecc-CCEEEEEECCCCcCCCCc-------ccEEEEEEEECCCCceEEcc-------c----------cCCc
Confidence 457777765433 589999998643211100 11234566543322111100 0 0011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 008312 164 IHHVRLTGLKPDTLYHYQCGDPS 186 (570)
Q Consensus 164 ~h~v~ltgL~P~T~Y~Yrvg~~~ 186 (570)
...++|++|+|+|.|.|||...+
T Consensus 65 ~~~~~v~~L~p~t~Y~frV~A~n 87 (111)
T 1x5y_A 65 RCGFTVKDLPTGARILFRVVGVN 87 (111)
T ss_dssp SSEEEEECCCTTCCEEEEEEEEE
T ss_pred ccEEEECCCCCCCEEEEEEEEEc
Confidence 23567899999999999997554
No 114
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=93.74 E-value=0.074 Score=54.61 Aligned_cols=22 Identities=14% Similarity=0.301 Sum_probs=18.6
Q ss_pred HHHHHHHHHHcCCeEEEEcccc
Q 008312 399 RVAMEDLLYKYGVDVVFNGHQV 420 (570)
Q Consensus 399 r~~l~~ll~~y~VdlvlsGH~~ 420 (570)
.+..+..++++++++++=|||.
T Consensus 237 ~~~~~~fl~~n~l~~IiR~Hq~ 258 (335)
T 3icf_A 237 PDITDRFLRNNKLRKIFRSHEL 258 (335)
T ss_dssp HHHHHHHHHHTTCSEEEECSSC
T ss_pred HHHHHHHHHHCCCeEEEEcCce
Confidence 3577789999999999999943
No 115
>3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B*
Probab=93.70 E-value=0.34 Score=46.70 Aligned_cols=97 Identities=18% Similarity=0.200 Sum_probs=59.1
Q ss_pred CCCCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCC-CCceEEEeEEEEeeeecccCCccccc
Q 008312 82 EGFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRS-QLNRKATGRSLVYSQLYPFLGLQNYT 160 (570)
Q Consensus 82 ~~~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~-~~~~~a~g~~~~y~~~~p~~g~~~~~ 160 (570)
.+..|..+.+....++.++.|+|.......+. + ....-.|+|..... ..+..+..
T Consensus 112 KPdPP~nLtv~~~~~~~~l~LsW~~P~~~~~~-~-----~~L~YEVrYr~~~~~~~W~~v~~------------------ 167 (223)
T 3up1_A 112 KPEAPFDLSVVYREGANDFVVTFNTSHLQKKY-V-----KVLMHDVAYRQEKDENKWTHVNL------------------ 167 (223)
T ss_dssp CCCCCEEEEEEEETTTTEEEEEEECGGGGCSS-S-----CCEEEEEEEEESSCSSCCEEEEE------------------
T ss_pred EcCCCcceEEEEEcCCCCEEEEECCCCCCCCc-c-----eeEEEEEEEEeCCCCCceEEEEe------------------
Confidence 34568999888876677899999985421110 0 01234677776532 22221110
Q ss_pred cCeEEEEEeCCCCCCCEEEEEEecCC-------CCCccceeEEEcCCCC
Q 008312 161 SGIIHHVRLTGLKPDTLYHYQCGDPS-------IPAMSGTYCFRTMPDS 202 (570)
Q Consensus 161 ~~~~h~v~ltgL~P~T~Y~Yrvg~~~-------~~~~S~~~~F~T~p~~ 202 (570)
......+.|.+|+|+|.|..||.... -+.||+...|+|++.+
T Consensus 168 ~~t~~~i~l~~L~Pgt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~~ 216 (223)
T 3up1_A 168 SSTKLTLLQRKLQPAAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEIN 216 (223)
T ss_dssp SSSEEEEEGGGSCTTCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCCC
T ss_pred cCceeEEeccccCCCcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCCC
Confidence 01123456789999999999985332 1367888999997653
No 116
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=93.70 E-value=0.046 Score=56.52 Aligned_cols=37 Identities=16% Similarity=0.156 Sum_probs=24.0
Q ss_pred EEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCCccc
Q 008312 210 RIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTY 246 (570)
Q Consensus 210 rf~vigD~g~~~~~-~~~i~~l~~~~pDfvl~~GDl~Y 246 (570)
+++++||+|..... ...++.......+-+|++||++.
T Consensus 71 pi~ViGDIHG~~~dL~~ll~~~g~~~~~~~vfLGD~VD 108 (357)
T 3ll8_A 71 PVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVD 108 (357)
T ss_dssp SEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSS
T ss_pred cceeeccCCCCHHHHHHHHHhcCCCCCcEEEECCCccC
Confidence 68999999986322 11222222235678999999995
No 117
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.69 E-value=0.1 Score=43.48 Aligned_cols=22 Identities=18% Similarity=0.246 Sum_probs=18.2
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPS 186 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~ 186 (570)
...+|++|+|+|.|.|||...+
T Consensus 65 ~~~~v~~L~p~t~Y~frV~A~n 86 (110)
T 2yuw_A 65 TKFTITGLPTDAKIFVRVKAVN 86 (110)
T ss_dssp SEEEECSCCTTCEEEEEEEEEE
T ss_pred CEEEECCCCCCCEEEEEEEEEc
Confidence 3567899999999999987554
No 118
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=93.65 E-value=0.081 Score=56.75 Aligned_cols=22 Identities=14% Similarity=0.197 Sum_probs=18.7
Q ss_pred HHHHHHHHHcCCeEEEEcccccc
Q 008312 400 VAMEDLLYKYGVDVVFNGHQVHA 422 (570)
Q Consensus 400 ~~l~~ll~~y~VdlvlsGH~~H~ 422 (570)
+.....++++++++++.|| .+.
T Consensus 387 ~~~~~fl~~~~~~~iir~H-~~~ 408 (477)
T 1wao_1 387 DVTKAFLEENNLDYIIRSH-EVK 408 (477)
T ss_dssp HHHHHHHHHTTCCEEEECC-SCC
T ss_pred HHHHHHHHHcCCeEEEECC-CCC
Confidence 4567788999999999999 764
No 119
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=93.60 E-value=0.36 Score=44.90 Aligned_cols=95 Identities=14% Similarity=0.191 Sum_probs=56.1
Q ss_pred CCCCCceEEEeecC---CCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccc
Q 008312 82 EGFEPEQISVSLSS---AHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQN 158 (570)
Q Consensus 82 ~~~~P~qi~lt~~~---~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~ 158 (570)
....|..+.+.... .++++.|+|.......... +-....=.|+|....+...... ..
T Consensus 102 ~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~----g~~~~~Y~v~y~~~~~~~~~~~------~~---------- 161 (210)
T 3n06_B 102 QPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKT----GWFTLLYEIRLKPEKAAEWEIH------FA---------- 161 (210)
T ss_dssp CCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTT----SSCCEEEEEEEECTTCSSCEEE------EE----------
T ss_pred ecCCCceEEEEEecCcCCCceEEEEcCCCCCccccC----CeEEEEEEEEEecCCCCCCEEE------ec----------
Confidence 34568888887643 4689999998643211000 0001234567766544322211 00
Q ss_pred cccCeEEEEEeCCCCCCCEEEEEEecCC---C-CCccceeEEEcC
Q 008312 159 YTSGIIHHVRLTGLKPDTLYHYQCGDPS---I-PAMSGTYCFRTM 199 (570)
Q Consensus 159 ~~~~~~h~v~ltgL~P~T~Y~Yrvg~~~---~-~~~S~~~~F~T~ 199 (570)
+....+.|.+|+|+|.|.+||.... . +.||+...|+|+
T Consensus 162 ---~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp 203 (210)
T 3n06_B 162 ---GQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIP 203 (210)
T ss_dssp ---ETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred ---cCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCceeEECc
Confidence 0113567899999999999985322 1 368889999995
No 120
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=93.56 E-value=0.43 Score=44.43 Aligned_cols=93 Identities=14% Similarity=0.128 Sum_probs=55.4
Q ss_pred CCCCceEEEeecC-----CCCceEEEEEeCcccccCCCCCCCCCCCccEEEEc-cCCCCCceEEEeEEEEeeeecccCCc
Q 008312 83 GFEPEQISVSLSS-----AHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYG-TRRSQLNRKATGRSLVYSQLYPFLGL 156 (570)
Q Consensus 83 ~~~P~qi~lt~~~-----~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg-~~~~~~~~~a~g~~~~y~~~~p~~g~ 156 (570)
...|..+.+.... ..+++.|+|..... .|. + ...=.|+|. ...+..+..+.-.
T Consensus 109 p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~-~~~-~------~l~Y~v~y~~~~~~~~w~~~~~~------------- 167 (215)
T 1cd9_B 109 LEPPMLQALDIGPDVVSHQPGCLWLSWKPWKP-SEY-M------EQECELRYQPQLKGANWTLVFHL------------- 167 (215)
T ss_dssp CCCCEEEECCC-------CCSCEEEEEECCGG-GTT-S------CEEEEEEEEESSTTCCCEEEEEE-------------
T ss_pred eCCCcEEEEEEeccccCCCCCeEEEEEeCCCC-CCe-E------EEEEEEEEccCCCCCCcEEEecc-------------
Confidence 4568877766542 46889999986542 111 0 013467887 4443333222100
Q ss_pred cccccCeEEEEEeCCCCCCCEEEEEEecCCC------CCccceeEEEcCC
Q 008312 157 QNYTSGIIHHVRLTGLKPDTLYHYQCGDPSI------PAMSGTYCFRTMP 200 (570)
Q Consensus 157 ~~~~~~~~h~v~ltgL~P~T~Y~Yrvg~~~~------~~~S~~~~F~T~p 200 (570)
.+....+.|++|+|+|.|.+||..... +.||+...|+|+.
T Consensus 168 ----~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e 213 (215)
T 1cd9_B 168 ----PSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213 (215)
T ss_dssp ----ESCEEEEEECCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred ----cCcceEEEEcCCCCCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence 012345789999999999999854321 2588888998864
No 121
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.55 E-value=0.22 Score=41.67 Aligned_cols=37 Identities=22% Similarity=0.269 Sum_probs=25.1
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC---CccceeE-EEcCCCC
Q 008312 166 HVRLTGLKPDTLYHYQCGDPSIP---AMSGTYC-FRTMPDS 202 (570)
Q Consensus 166 ~v~ltgL~P~T~Y~Yrvg~~~~~---~~S~~~~-F~T~p~~ 202 (570)
.+.|++|+|+|.|.|||...+.. .+|..-. ++|.+.+
T Consensus 73 ~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~t~~~~ 113 (117)
T 1uem_A 73 LYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDSG 113 (117)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEEEEECCCCCCEECCCSS
T ss_pred EEEECCCCCCCEEEEEEEEECCCccCCCcCCCccEEccCCC
Confidence 46789999999999999754432 3344333 6666543
No 122
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=93.30 E-value=0.26 Score=45.78 Aligned_cols=96 Identities=18% Similarity=0.142 Sum_probs=54.4
Q ss_pred CCCCceEEEeec-CCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCcccccc
Q 008312 83 GFEPEQISVSLS-SAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTS 161 (570)
Q Consensus 83 ~~~P~qi~lt~~-~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~ 161 (570)
...|..+.+... .+++++.|+|.-....-|. ...=.|+|....+.....+. .. . ..
T Consensus 104 p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~--------i~~Y~v~y~~~~~~~~~~~~----------~~-~----~~ 160 (215)
T 1bqu_A 104 PNPPHNLSVINSEELSSILKLTWTNPSIKSVI--------ILKYNIQYRTKDASTWSQIP----------PE-D----TA 160 (215)
T ss_dssp CCCCEEEEEECC--CCSCEEEEEECCGGGGTS--------CEEEEEEEEETTCSSCEECC----------GG-G----GC
T ss_pred CCCCCceEEEEecCCCceEEEEEeCCCCCCcc--------eEEEEEEEccCCCCCceEec----------cc-c----cc
Confidence 346888877653 3468999999864421110 01234566554322211110 00 0 01
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecCC---C---CCccceeEEEcCCC
Q 008312 162 GIIHHVRLTGLKPDTLYHYQCGDPS---I---PAMSGTYCFRTMPD 201 (570)
Q Consensus 162 ~~~h~v~ltgL~P~T~Y~Yrvg~~~---~---~~~S~~~~F~T~p~ 201 (570)
+....++|+||+|+|.|.+||...+ . ..||+...++|.+.
T Consensus 161 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~~ 206 (215)
T 1bqu_A 161 STRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 206 (215)
T ss_dssp SCCSEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECCC
T ss_pred CccceEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCccccccccc
Confidence 1224668999999999999986432 1 24777888888754
No 123
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.21 E-value=0.21 Score=42.32 Aligned_cols=24 Identities=17% Similarity=0.393 Sum_probs=19.2
Q ss_pred EEEeCCCCCCCEEEEEEecCCCCC
Q 008312 166 HVRLTGLKPDTLYHYQCGDPSIPA 189 (570)
Q Consensus 166 ~v~ltgL~P~T~Y~Yrvg~~~~~~ 189 (570)
..+++||+|+|.|.|||...+..+
T Consensus 69 ~~~v~~L~p~t~Y~frV~A~N~~G 92 (112)
T 1bpv_A 69 EFTVSGLTEDAAYEFRVIAKNAAG 92 (112)
T ss_dssp EEEECSCCSSCCEEEEEEEECTTS
T ss_pred EEEECCCCCCCEEEEEEEEEECCC
Confidence 457899999999999997665434
No 124
>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.21 E-value=0.046 Score=48.79 Aligned_cols=47 Identities=26% Similarity=0.322 Sum_probs=33.3
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCCCCCCCCeEE
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDSSSTSYPSRI 211 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~~~~~~~~rf 211 (570)
..++|+||+|+|.|.+||..-+. +..|+...|+|.+...+.-.++++
T Consensus 82 ts~~v~~L~P~T~Y~~rV~A~n~~G~G~~S~~~~f~T~~~~P~~P~~p~l 131 (137)
T 1wk0_A 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCEPDIPNPPRI 131 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCSSSCCCSCSCC
T ss_pred cEEEEcCCCCCCEEEEEEEEEeCCCcCCCCCCEEEECCCCCCCCCCCCEE
Confidence 46789999999999999854332 357888999998665333224443
No 125
>3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum}
Probab=93.17 E-value=0.6 Score=39.05 Aligned_cols=33 Identities=21% Similarity=0.114 Sum_probs=22.1
Q ss_pred EeCCCCCCCEEEEEEecCCC---CCccceeEEEcCC
Q 008312 168 RLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMP 200 (570)
Q Consensus 168 ~ltgL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p 200 (570)
..++|+||++|+|+|..-+. +..|...+.++..
T Consensus 60 ~d~~l~~g~~Y~Y~V~Avn~~geS~~S~~vs~~~~~ 95 (103)
T 3mpc_A 60 TDTGVATGTKYYYVVSAVSNGVETLNSAEAILQYPK 95 (103)
T ss_dssp EETTCCTTCCCEEEEEEEETTEECCCCCCEECBCCC
T ss_pred EECCCCCCCEEEEEEEEEeCcCCcCCCccEEEECCc
Confidence 35899999999999854321 2455566655543
No 126
>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A
Probab=92.87 E-value=0.39 Score=39.57 Aligned_cols=74 Identities=19% Similarity=0.222 Sum_probs=42.7
Q ss_pred CCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCC-CceEEEeEEEEeeeecccCCccccccCe
Q 008312 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQ-LNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (570)
Q Consensus 85 ~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~-~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 163 (570)
.|..+++.-- +.+++.|+|.-... .|. ...=.|+|....+. ...... .+ +-
T Consensus 7 ~P~~l~v~~~-t~~Sv~l~W~~p~~-~~~--------i~~Y~v~y~~~~~~~~~~~~~---------v~---------~~ 58 (101)
T 3k2m_C 7 VPTKLEVVAA-TPTSLLISWDAPMS-SSS--------VYYYRITYGETGGNSPVQEFT---------VP---------YS 58 (101)
T ss_dssp SSCEEEEEEE-ETTEEEEEECCCCT-TSC--------CCEEEEEEEETTCSSCCEEEE---------EE---------TT
T ss_pred CCcceEEeec-CCCEEEEEecCCCC-CCc--------eeeEEEEEEECCCCCccEEEE---------cC---------CC
Confidence 5788877543 36899999976431 010 11224667654332 111110 00 11
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 008312 164 IHHVRLTGLKPDTLYHYQCGDPS 186 (570)
Q Consensus 164 ~h~v~ltgL~P~T~Y~Yrvg~~~ 186 (570)
...++|+||+|+|.|.++|..-+
T Consensus 59 ~t~~~l~~L~p~t~Y~~~V~A~~ 81 (101)
T 3k2m_C 59 SSTATISGLSPGVDYTITVYAWG 81 (101)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEE
T ss_pred ccEEEECCCCCCCEEEEEEEEEe
Confidence 23678999999999999986543
No 127
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=92.81 E-value=0.083 Score=57.03 Aligned_cols=20 Identities=15% Similarity=0.272 Sum_probs=17.8
Q ss_pred HHHHHHHHHcCCeEEEEccc
Q 008312 400 VAMEDLLYKYGVDVVFNGHQ 419 (570)
Q Consensus 400 ~~l~~ll~~y~VdlvlsGH~ 419 (570)
+...+.++++++++++-|||
T Consensus 263 d~v~~FL~~n~l~lIIRaHq 282 (521)
T 1aui_A 263 PAVCEFLQHNNLLSILRAHE 282 (521)
T ss_dssp HHHHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHHcCCcEEEEccc
Confidence 57788999999999999994
No 128
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=92.73 E-value=0.48 Score=43.86 Aligned_cols=35 Identities=20% Similarity=0.231 Sum_probs=27.1
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCC
Q 008312 166 HVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMP 200 (570)
Q Consensus 166 ~v~ltgL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p 200 (570)
...|+||+|+|.|.|||..-+. +.+|+...++|..
T Consensus 175 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 212 (214)
T 2ibg_A 175 SFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQR 212 (214)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCccCCCcceEeeEecC
Confidence 4578999999999999864332 3577888888863
No 129
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=92.57 E-value=0.37 Score=47.55 Aligned_cols=95 Identities=17% Similarity=0.111 Sum_probs=54.9
Q ss_pred CCCCceEEEeec-CCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCcccccc
Q 008312 83 GFEPEQISVSLS-SAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTS 161 (570)
Q Consensus 83 ~~~P~qi~lt~~-~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~ 161 (570)
+..|..+.+... .+++++.|+|.-....-|. ...=.|+|.......+..+. ... ..
T Consensus 200 p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~--------i~~Y~v~y~~~~~~~w~~~~----------~~~-----~~ 256 (303)
T 1i1r_A 200 PNPPHNLSVINSEELSSILKLTWTNPSIKSVI--------ILKYNIQYRTKDASTWSQIP----------PED-----TA 256 (303)
T ss_dssp CCCCEEEEEECCSSSSSCEEEEEECCGGGGTS--------CEEEEEEEEETTCSSCEECC----------GGG-----GC
T ss_pred cCCCcceEEEEecCCCCEEEEEECCCCCCCcc--------cEEEEEEEEeCCCCCceEEc----------ccc-----CC
Confidence 446888877643 3568999999865431110 01235666655432221110 000 01
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecCCC------CCccceeEEEcCC
Q 008312 162 GIIHHVRLTGLKPDTLYHYQCGDPSI------PAMSGTYCFRTMP 200 (570)
Q Consensus 162 ~~~h~v~ltgL~P~T~Y~Yrvg~~~~------~~~S~~~~F~T~p 200 (570)
+-...+.|++|+|+|.|.+||...+. +.||+...|+|+.
T Consensus 257 ~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 257 STRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp SCCSEEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred CceeEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 12245689999999999999864321 2577888999864
No 130
>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B*
Probab=92.29 E-value=0.58 Score=44.47 Aligned_cols=96 Identities=21% Similarity=0.231 Sum_probs=56.2
Q ss_pred CCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008312 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (570)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 163 (570)
..|..|++...+ .+++.|+|......... + ....=.|+|....+. +..+. ... ...-
T Consensus 107 ~pP~~l~~~~~~-~~~l~lsW~~p~~~~~~-----~-~~l~Yevry~~~~~~-w~~~~--~~~-------------~~~~ 163 (214)
T 2b5i_B 107 MAPISLQVVHVE-THRCNISWEISQASHYF-----E-RHLEFEARTLSPGHT-WEEAP--LLT-------------LKQK 163 (214)
T ss_dssp CCCEEEEEEEEC-SSCEEEEEECCSCCGGG-----T-TCEEEEEEEECTTSC-STTSC--CEE-------------ECSC
T ss_pred CCCceEEEEEec-CCeEEEEECCCCccccC-----C-CceEEEEEEecCCCC-hheee--eee-------------eccc
Confidence 568888887655 46899999875321000 0 011345677654321 11000 000 0112
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC-------CCccceeEEEcCCCC
Q 008312 164 IHHVRLTGLKPDTLYHYQCGDPSI-------PAMSGTYCFRTMPDS 202 (570)
Q Consensus 164 ~h~v~ltgL~P~T~Y~Yrvg~~~~-------~~~S~~~~F~T~p~~ 202 (570)
-+.+.|.+|+|+|.|..||..... +.||+...|+|.|.+
T Consensus 164 ~~~~~l~~L~p~t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~~ 209 (214)
T 2b5i_B 164 QEWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPAA 209 (214)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC--
T ss_pred ceEEEeccCCCCCEEEEEEEEeeCCCCCCCccCCCCCEEEEcCCCC
Confidence 346788999999999999864321 378889999998754
No 131
>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A
Probab=92.27 E-value=0.52 Score=44.81 Aligned_cols=92 Identities=13% Similarity=0.125 Sum_probs=54.7
Q ss_pred CCCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccC
Q 008312 83 GFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (570)
Q Consensus 83 ~~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 162 (570)
...|..|++......+++.|+|...... +++ ....=.|+|....+..+.... .. ..
T Consensus 122 p~pP~~l~~~~~~~~~~l~v~W~~P~~~------~~~-~~l~Yev~y~~~~~~~w~~~~---~~--------------~~ 177 (227)
T 1eer_B 122 LDAPVGLVARLADESGHVVLRWLPPPET------PMT-SHIRYEVDVSAGQGAGSVQRV---EI--------------LE 177 (227)
T ss_dssp CCCCEEEEEEECSSTTCEEEEEECCSSC------SCG-GGEEEEEEEECCSSSCCCCEE---EE--------------CT
T ss_pred cCcCcceEEEEcCCCCeEEEEEcCCCCc------ccc-cceEEEEEEEcCCCCCcEEEE---EE--------------ec
Confidence 4568888888654468999999874321 000 011235677654432221100 00 00
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCC--------CCccceeEEEc
Q 008312 163 IIHHVRLTGLKPDTLYHYQCGDPSI--------PAMSGTYCFRT 198 (570)
Q Consensus 163 ~~h~v~ltgL~P~T~Y~Yrvg~~~~--------~~~S~~~~F~T 198 (570)
-...+.|.+|+|+|.|..||..... +.||+...|+|
T Consensus 178 ~~~~~~l~~L~p~t~Y~vqVRa~~~~~~~~g~wS~WS~~~~~~t 221 (227)
T 1eer_B 178 GRTECVLSNLRGRTRYTFAVRARMAEPSFGGFWSEWSEPVSLLT 221 (227)
T ss_dssp TCCEEEECCCCSSCEEEEEEEEEECTTTCCEECCCCCCCEEEEC
T ss_pred CceEEEEcccCCCCeEEEEEEEeECCCCCCCcCCCCCCCEEEEC
Confidence 1235678999999999999864421 36888889998
No 132
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1
Probab=92.18 E-value=0.7 Score=39.19 Aligned_cols=23 Identities=22% Similarity=0.316 Sum_probs=19.1
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 008312 164 IHHVRLTGLKPDTLYHYQCGDPS 186 (570)
Q Consensus 164 ~h~v~ltgL~P~T~Y~Yrvg~~~ 186 (570)
...++|+||+|+|.|.+||...+
T Consensus 70 ~~~~~v~~L~p~t~Y~FRV~A~N 92 (115)
T 2ic2_A 70 SFTASVTDLKPQHTYRFRILAVY 92 (115)
T ss_dssp EEEEEECSCCSSEEEEEEEEEEE
T ss_pred eeEEEeCCCCCCCEEEEEEEEEe
Confidence 34678999999999999986544
No 133
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=92.16 E-value=1.1 Score=43.69 Aligned_cols=91 Identities=15% Similarity=0.060 Sum_probs=52.0
Q ss_pred CCCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccC
Q 008312 83 GFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (570)
Q Consensus 83 ~~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 162 (570)
...|..+.+.-.. ++++.|+|.-.... ...=.|+|............ .. .+
T Consensus 21 p~~P~~l~~~~~~-~~sv~l~W~~p~~~-----------~~~Y~v~~~~~~~~~~~~~~----~~-------------~~ 71 (290)
T 3r8q_A 21 IPAPTDLKFTQVT-PTSLSAQWTPPNVQ-----------LTGYRVRVTPKEKTGPMKEI----NL-------------AP 71 (290)
T ss_dssp CCCCEEEEEEEEC-SSCEEEEEECCSSC-----------CCEEEEEEEESSSSSCCEEE----EE-------------CT
T ss_pred CCCCCceEEEECC-CCEEEEEEeCCCCC-----------eeEEEEEEEeCCCCCceEEE----Ec-------------CC
Confidence 3468888775543 68999999864311 12235666654422211110 00 11
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCCCCccc--eeEEEcCCCC
Q 008312 163 IIHHVRLTGLKPDTLYHYQCGDPSIPAMSG--TYCFRTMPDS 202 (570)
Q Consensus 163 ~~h~v~ltgL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~p~~ 202 (570)
-...+.|++|+|+|.|.|+|..-+..+.|. ...|+|.+.+
T Consensus 72 ~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~~~t~~~~ 113 (290)
T 3r8q_A 72 DSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENV 113 (290)
T ss_dssp TCCEEEECSCCSSCEEEEEEEEEETTEECCCEEEEEECCCCC
T ss_pred CccEEEeCCCCCCCEEEEEEEEEeCCCCCCCcceeEecCCCC
Confidence 124678899999999999986543222222 4467776544
No 134
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=92.08 E-value=0.48 Score=42.77 Aligned_cols=81 Identities=19% Similarity=0.267 Sum_probs=45.7
Q ss_pred CCCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccC
Q 008312 83 GFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (570)
Q Consensus 83 ~~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 162 (570)
...|..+.+.-.. .+++.|+|.......|.. ...=.|+|..............
T Consensus 103 p~~p~~~~~~~~~-~~~v~l~W~~p~~~~~~~-------i~~Y~v~~~~~~~~~~~~~~~~------------------- 155 (197)
T 3lpw_A 103 PLPPGKITLMDVT-RNSVSLSWEKPEHDGGSR-------ILGYIVEMQTKGSDKWATCATV------------------- 155 (197)
T ss_dssp CCCCSCEEEEEEC-SSCEEEEECCCSCCTTSC-------CCEEEEEEEETTCSCCEEEEEE-------------------
T ss_pred CCCCcccEEEecc-CCeEEEEecCCCcCCCCc-------ccEEEEEEEeCCCCceEEeecc-------------------
Confidence 3467888765433 689999998643211100 1123566665443322221100
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCCCCc
Q 008312 163 IIHHVRLTGLKPDTLYHYQCGDPSIPAM 190 (570)
Q Consensus 163 ~~h~v~ltgL~P~T~Y~Yrvg~~~~~~~ 190 (570)
-...+.|++|+|+|.|.|||...+..+.
T Consensus 156 ~~~~~~~~~L~p~t~Y~~~V~A~n~~G~ 183 (197)
T 3lpw_A 156 KVTEATITGLIQGEEYSFRVSAQNEKGI 183 (197)
T ss_dssp SSSEEEECCCCTTCEEEEEEEEEETTEE
T ss_pred cccEEEeCCcCCCCEEEEEEEEEeCCcc
Confidence 0124578999999999999975543333
No 135
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1
Probab=92.02 E-value=0.13 Score=44.48 Aligned_cols=37 Identities=27% Similarity=0.346 Sum_probs=29.2
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC---CccceeEEEcCCCC
Q 008312 166 HVRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTMPDS 202 (570)
Q Consensus 166 ~v~ltgL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~ 202 (570)
.++++||+|+|+|.|||...+.. .+|+...++|++.+
T Consensus 76 ~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p 115 (120)
T 1wfu_A 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCCC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCCccEeeEcCCCC
Confidence 36789999999999998755533 56778899998654
No 136
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=91.93 E-value=1.5 Score=42.27 Aligned_cols=92 Identities=21% Similarity=0.133 Sum_probs=51.4
Q ss_pred CCCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccC
Q 008312 83 GFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (570)
Q Consensus 83 ~~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 162 (570)
...|..+.+.-. ..+++.|+|.-.... ...=.|+|....+....... .. + ..+
T Consensus 105 p~~P~~l~~~~~-~~~sv~l~W~~p~~~-----------i~~Y~v~~~~~~~~~~~~~~-----~~------~----~~~ 157 (283)
T 1tdq_A 105 IDAPKNLRVGSR-TATSLDLEWDNSEAE-----------AQEYKVVYSTLAGEQYHEVL-----VP------K----GIG 157 (283)
T ss_dssp CCCCEEEEEEEE-CSSCEEEEEECCSSC-----------CSEEEEEEEETTCCCCEEEE-----EE------C----CSS
T ss_pred CCCCCceEEEec-CCCeEEEEecCCCCC-----------ccEEEEEEEeCCCCcceEEE-----CC------C----CCc
Confidence 345777766443 368999999864311 12335666554332221110 00 0 001
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCCCCccce--eEEEcCCC
Q 008312 163 IIHHVRLTGLKPDTLYHYQCGDPSIPAMSGT--YCFRTMPD 201 (570)
Q Consensus 163 ~~h~v~ltgL~P~T~Y~Yrvg~~~~~~~S~~--~~F~T~p~ 201 (570)
-...+.|+||+|+|.|.++|...+..+.|.. ..+.|.|.
T Consensus 158 ~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~~~ 198 (283)
T 1tdq_A 158 PTTKTTLTDLVPGTEYGVGISAVMNSKQSIPATMNARTELD 198 (283)
T ss_dssp SEEEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCC
T ss_pred ccceEEEecCCCCCEEEEEEEEEeCCCCCcceEEEecCCCC
Confidence 1467789999999999999865543444543 44555443
No 137
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=91.77 E-value=2 Score=36.57 Aligned_cols=89 Identities=16% Similarity=0.088 Sum_probs=48.4
Q ss_pred CCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCeE
Q 008312 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (570)
Q Consensus 85 ~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 164 (570)
.|.++++.-.. +++.|+|.-....-|. + ..=.|+|.... ..... .. . .+-.
T Consensus 30 ~P~~l~~~~~~--~sv~l~W~~P~~~~g~-i-------~~Y~v~y~~~~-~~~~~--------~~-~---------~~~~ 80 (126)
T 1x5i_A 30 VPSSLHVRPLV--TSIVVSWTPPENQNIV-V-------RGYAIGYGIGS-PHAQT--------IK-V---------DYKQ 80 (126)
T ss_dssp SCSEEEEEEET--TEEEEEEECCSCTTBC-C-------CEEEEEECSSC-GGGEE--------EE-C---------CTTC
T ss_pred CCCeeEEEecC--CEEEEEEcCCCCCCCC-E-------eEEEEEEEcCC-CCceE--------EE-e---------CCCe
Confidence 68888776653 8999999865321110 1 12246665321 11000 00 0 1123
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCccc--eeEEEcCCCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPSIPAMSG--TYCFRTMPDS 202 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~p~~ 202 (570)
...+|++|+|+|.|.+||..-+..+.+. ...++|.+..
T Consensus 81 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~T~~~~ 120 (126)
T 1x5i_A 81 RYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPHT 120 (126)
T ss_dssp CEEEECSCCSSCEECCEEEEECSSCBCCCCCCCEECCCCT
T ss_pred eEEEEeCCCCCCEEEEEEEEEeCCccCcceeeEEecccCC
Confidence 4568899999999999986544322222 2345555443
No 138
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.67 E-value=1.1 Score=37.26 Aligned_cols=22 Identities=23% Similarity=0.382 Sum_probs=18.2
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPS 186 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~ 186 (570)
..+.|++|+|+|.|.+||...+
T Consensus 73 ~~~~i~~L~p~t~Y~~~V~A~n 94 (118)
T 2yrz_A 73 TSVVVEDLLPNHSYVFRVRAQS 94 (118)
T ss_dssp CEEEEESCCTTCEEEEEEEEEE
T ss_pred CEEEeCCCCCCCEEEEEEEEEc
Confidence 3567899999999999986554
No 139
>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*
Probab=91.67 E-value=0.39 Score=40.84 Aligned_cols=72 Identities=22% Similarity=0.326 Sum_probs=42.6
Q ss_pred CCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCC-ceEEEeEEEEeeeecccCCccccccC
Q 008312 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQL-NRKATGRSLVYSQLYPFLGLQNYTSG 162 (570)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~-~~~a~g~~~~y~~~~p~~g~~~~~~~ 162 (570)
..|..+.+.-- +.+++.|+|...... ...=.|+|....+.. .... . . ++
T Consensus 5 ~~P~~L~v~~~-t~~Sv~lsW~~p~g~-----------i~~Y~v~y~~~~~~~~~~~~-----~----v---------~~ 54 (114)
T 3qwq_B 5 DVPRDLEVVAA-TPTSLLISWDSGRGS-----------YQYYRITYGETGGNSPVQEF-----T----V---------PG 54 (114)
T ss_dssp CCCEEEEEEEE-ETTEEEEEEECCSCC-----------CSEEEEEEEESSCSSCCEEE-----E----E---------ET
T ss_pred CCCCceEEEec-CCCEEEEEEcCCcCc-----------ccEEEEEEEECCCCCccEEE-----E----e---------CC
Confidence 35788877543 368999999864211 112356776544321 1110 0 0 01
Q ss_pred eEEEEEeCCCCCCCEEEEEEecC
Q 008312 163 IIHHVRLTGLKPDTLYHYQCGDP 185 (570)
Q Consensus 163 ~~h~v~ltgL~P~T~Y~Yrvg~~ 185 (570)
-...+.|+||+|+|.|.++|..-
T Consensus 55 ~~ts~~l~gL~P~T~Y~v~V~A~ 77 (114)
T 3qwq_B 55 PVHTATISGLKPGVDYTITVYAV 77 (114)
T ss_dssp TCCEEEECSCCTTCEEEEEEEEE
T ss_pred CcCEEEeCCCCCCCEEEEEEEEE
Confidence 12357899999999999998543
No 140
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=91.65 E-value=0.65 Score=42.96 Aligned_cols=92 Identities=17% Similarity=0.206 Sum_probs=53.2
Q ss_pred CCCceEEEeecC-CCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCce--EEEeEEEEeeeecccCCccccc
Q 008312 84 FEPEQISVSLSS-AHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNR--KATGRSLVYSQLYPFLGLQNYT 160 (570)
Q Consensus 84 ~~P~qi~lt~~~-~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~--~a~g~~~~y~~~~p~~g~~~~~ 160 (570)
..|..+.+...+ ..+++.|+|.-....-|. ...=.|+|......... ... ..
T Consensus 107 ~~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~--------i~~Y~v~~~~~~~~~~~~~~~~----~~------------- 161 (211)
T 3p4l_A 107 SPPKDVTVVSKEGKPKTIIVNWQPPSEANGK--------ITGYIIYYSTDVNAEIHDWVIE----PV------------- 161 (211)
T ss_dssp SCCEEEEEEEETTEEEEEEEEEECCTTCCSC--------CCEEEEEEESCTTSCGGGSEEE----EE-------------
T ss_pred CCCcceEEEecCCCCCEEEEEECCCCCCCCC--------EEEEEEEEEECCCCCCCceEEE----Ee-------------
Confidence 368888877654 368999999864321110 01224566654332111 100 00
Q ss_pred cCeEEEEEeCCCCCCCEEEEEEecCC---CCCccceeEEEcCC
Q 008312 161 SGIIHHVRLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRTMP 200 (570)
Q Consensus 161 ~~~~h~v~ltgL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~p 200 (570)
.+-...+.|+||+|+|.|.+||..-+ .+.+|+...|+|..
T Consensus 162 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 162 VGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp ESSCSEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECC-
T ss_pred cCCeeEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEccCcc
Confidence 11123568899999999999985433 23677888888753
No 141
>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens}
Probab=91.52 E-value=0.82 Score=39.18 Aligned_cols=74 Identities=19% Similarity=0.269 Sum_probs=43.6
Q ss_pred CCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008312 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (570)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 163 (570)
..|..+.+.-- +.+++.|+|.-.... ...=.|+|....+...... . . . .+-
T Consensus 30 ~~P~~l~v~~~-t~~Si~lsW~~p~~~-----------i~~Y~V~y~~~~~~~~~~~----~---~-v---------~~~ 80 (121)
T 2ocf_D 30 DVPTKLEVVAA-TPTSLLISWDAPAVT-----------VRYYRITYGETGGNSPVQE----F---T-V---------PGS 80 (121)
T ss_dssp CSCEEEEEEEE-CSSCEEEEEECCSSC-----------CCEEEEEEEETTTCSCBEE----E---E-E---------ETT
T ss_pred CCCCccEEEec-CCCEEEEEEcCCCCC-----------CcEEEEEEEECCCCCccEE----E---E-e---------CCC
Confidence 46888877653 368999999753211 1123566665433211100 0 0 0 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 008312 164 IHHVRLTGLKPDTLYHYQCGDPS 186 (570)
Q Consensus 164 ~h~v~ltgL~P~T~Y~Yrvg~~~ 186 (570)
...+.|+||+|+|.|.++|..-+
T Consensus 81 ~t~~~l~gL~P~t~Y~~~V~A~~ 103 (121)
T 2ocf_D 81 KSTATISGLKPGVDYTITVYAVT 103 (121)
T ss_dssp CCEEEECCCCTTCEEEEEEEEEC
T ss_pred cCEEEeCCCCCCCEEEEEEEEEe
Confidence 23678999999999999997654
No 142
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=91.50 E-value=0.86 Score=45.16 Aligned_cols=94 Identities=17% Similarity=0.004 Sum_probs=55.6
Q ss_pred CCCCceEEEeecC-----CCCceEEEEEeCcccccCCCCCCCCCCCccEEEEc-cCCCCCceEEEeEEEEeeeecccCCc
Q 008312 83 GFEPEQISVSLSS-----AHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYG-TRRSQLNRKATGRSLVYSQLYPFLGL 156 (570)
Q Consensus 83 ~~~P~qi~lt~~~-----~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg-~~~~~~~~~a~g~~~~y~~~~p~~g~ 156 (570)
+..|..+.+.... .++++.|+|..... .|. ....=.|+|. ...+..+..+...
T Consensus 203 p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~-~~~-------~~l~Y~v~y~~~~~~~~w~~~~~~------------- 261 (313)
T 2d9q_B 203 LEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQP-GLH-------INQKCELRHKPQRGEASWALVGPL------------- 261 (313)
T ss_dssp CCCCEEEECCC-------CCSCEEEEEECCGG-GTT-------SCEEEEEEEEESSSCCCCEEEEEE-------------
T ss_pred cCcCceeEEEEecccccCCCCeEEEEECCCCC-CCc-------eeEEEEEEEccCCCCCCcEEcccc-------------
Confidence 3467777665432 46899999987432 111 0123467887 4443333322100
Q ss_pred cccccCeEEEEEeCCCCCCCEEEEEEecCC---CC---CccceeEEEcCCC
Q 008312 157 QNYTSGIIHHVRLTGLKPDTLYHYQCGDPS---IP---AMSGTYCFRTMPD 201 (570)
Q Consensus 157 ~~~~~~~~h~v~ltgL~P~T~Y~Yrvg~~~---~~---~~S~~~~F~T~p~ 201 (570)
....+.+.|++|+|+|.|.+||...+ .+ .||+...|+|+..
T Consensus 262 ----~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~~ 308 (313)
T 2d9q_B 262 ----PLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTER 308 (313)
T ss_dssp ----CSCEEEEEECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC-
T ss_pred ----cCcceEEEEeCCCCCCeEEEEEEeeECCCCCccCCCCCccceeCCcc
Confidence 11235678999999999999986432 12 4778889988754
No 143
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=91.42 E-value=0.59 Score=39.16 Aligned_cols=37 Identities=16% Similarity=0.168 Sum_probs=25.0
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---Ccccee-EEEcCCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPSIP---AMSGTY-CFRTMPD 201 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~~~---~~S~~~-~F~T~p~ 201 (570)
..++|+||+|+|.|.|||...+.. .+|..- .++|.+.
T Consensus 76 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~t~~~ 116 (121)
T 1wf5_A 76 TSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPES 116 (121)
T ss_dssp CEEEEESCCTTCEEEEEEEEEESSCEEEECCCCSCEECCCC
T ss_pred cEEEECCcCCCCEEEEEEEEEcCCccCCCcCCcceeEcCCC
Confidence 356889999999999998654432 344443 4666544
No 144
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=91.34 E-value=0.4 Score=46.66 Aligned_cols=35 Identities=23% Similarity=0.261 Sum_probs=27.9
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC--CccceeEEEcCC
Q 008312 166 HVRLTGLKPDTLYHYQCGDPSIP--AMSGTYCFRTMP 200 (570)
Q Consensus 166 ~v~ltgL~P~T~Y~Yrvg~~~~~--~~S~~~~F~T~p 200 (570)
..+|+||+|+|.|.+||..-+.. .+|+...|+|++
T Consensus 254 ~~~~~~L~p~t~Y~~~V~A~n~~Gg~~s~~~~~~T~~ 290 (290)
T 3l5i_A 254 EYTLSSLTSDTLYMVRMAAYTDEGGKDGPEFTFTTPK 290 (290)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEEEECCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCCCCCCCceEeecCC
Confidence 56899999999999998544322 488899999964
No 145
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=91.23 E-value=1.1 Score=37.88 Aligned_cols=34 Identities=15% Similarity=0.069 Sum_probs=24.1
Q ss_pred eCCCCCCCEEEEEEecCCCC---Cccce-eEEEcCCCC
Q 008312 169 LTGLKPDTLYHYQCGDPSIP---AMSGT-YCFRTMPDS 202 (570)
Q Consensus 169 ltgL~P~T~Y~Yrvg~~~~~---~~S~~-~~F~T~p~~ 202 (570)
+.+|+|+|.|.|||...+.. .+|.. ..|+|.+..
T Consensus 78 i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~~ 115 (127)
T 1uey_A 78 QLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASE 115 (127)
T ss_dssp EECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCSS
T ss_pred EecCCCCCEEEEEEEEEeCCccCCccccccceEcCCCC
Confidence 56999999999998654322 45555 478886543
No 146
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=91.17 E-value=1.2 Score=44.80 Aligned_cols=93 Identities=11% Similarity=0.049 Sum_probs=53.5
Q ss_pred CCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008312 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (570)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 163 (570)
..|..+.+.-..+..++.|+|.-... + ....=.|+|....+....... ..+ .+.
T Consensus 3 ~~P~~l~~~~~~~~~sv~l~W~~~~~--~--------~i~~Y~v~~~~~~~~~~~~~~---~~~-------------~~~ 56 (368)
T 1fnf_A 3 SPPTNLHLEANPDTGVLTVSWERSTT--P--------DITGYRITTTPTNGQQGNSLE---EVV-------------HAD 56 (368)
T ss_dssp CCCEEEEEEECSSSSCEEEEEECCSC--S--------SCCEEEEEEEETTTCSSCCEE---EEE-------------CTT
T ss_pred CCCcceEEEecCCCcEEEEEEeCCCC--C--------CceEEEEEEEECCCCCCceeE---EEe-------------cCC
Confidence 45888888755433469999987431 1 112335667654432111000 000 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCccceeEEEcCCCC
Q 008312 164 IHHVRLTGLKPDTLYHYQCGDPSIPAMSGTYCFRTMPDS 202 (570)
Q Consensus 164 ~h~v~ltgL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p~~ 202 (570)
...+.|++|+|+|.|.|||...+..+.|......+.+.+
T Consensus 57 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~~~ 95 (368)
T 1fnf_A 57 QSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIPAV 95 (368)
T ss_dssp CCEEECCCCCTTSCEEEEEEEEETTEECCCEEEEECCCC
T ss_pred cCEEEECCCCCCCEEEEEEEEEcCCCccCceeeeecCCC
Confidence 245689999999999999875544456665555555443
No 147
>1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=91.09 E-value=1.2 Score=36.59 Aligned_cols=87 Identities=20% Similarity=0.260 Sum_probs=53.1
Q ss_pred CCCceEEEeecC-CCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCC-ceEEEeEEEEeeeecccCCcccccc
Q 008312 84 FEPEQISVSLSS-AHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQL-NRKATGRSLVYSQLYPFLGLQNYTS 161 (570)
Q Consensus 84 ~~P~qi~lt~~~-~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~-~~~a~g~~~~y~~~~p~~g~~~~~~ 161 (570)
.-|-|+.++-++ .|++-.|.|...... |+ .+-...|......- ++.+. -.
T Consensus 6 ~gpa~v~is~~~s~pdsh~iqW~~~s~s------~I----~eyiL~~R~k~~~g~Wke~~------------------Ip 57 (98)
T 1oww_A 6 SGPVEVFITETPSQPNSHPIQWNAPQPS------HI----SKYILRWRPKNSVGRWKEAT------------------IP 57 (98)
T ss_dssp CCCCEEECCCCSSCTTCEEEEEECCSSS------CE----EEEEEEEEETTCSSCCEEEE------------------EC
T ss_pred CcceEEEecCCCCCCCccceEEecCCCC------Cc----eEEEEEEEEcCCCCceeEEE------------------ec
Confidence 358888887664 379999999985431 10 12233444333211 11111 13
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecCCCCCccc--eeEEEc
Q 008312 162 GIIHHVRLTGLKPDTLYHYQCGDPSIPAMSG--TYCFRT 198 (570)
Q Consensus 162 ~~~h~v~ltgL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T 198 (570)
+.+..-+|+||+||.+|.=++-+-..-+|++ .|.|+|
T Consensus 58 ~h~nSYtI~GL~P~~~YE~qv~S~~ryG~~Evs~f~FtT 96 (98)
T 1oww_A 58 GHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTT 96 (98)
T ss_dssp SSCCEEEECSCCSSEEEEEEEEEEESSSCEEEEEEEEEE
T ss_pred CccceEEEecCCCCcEEEEEEEEeeccCcccceEEEEEe
Confidence 4556668999999999999987665446766 566665
No 148
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=91.05 E-value=0.68 Score=50.52 Aligned_cols=37 Identities=32% Similarity=0.313 Sum_probs=28.6
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008312 166 HVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (570)
Q Consensus 166 ~v~ltgL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 202 (570)
.++|+||+|+|.|.+||..-+. +.+|+...|+|++..
T Consensus 496 s~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T~~~~ 535 (536)
T 3fl7_A 496 SVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTLSPE 535 (536)
T ss_dssp EEECCSCCSSCEEEEEEEEECC---CEECCCEEEECCC--
T ss_pred EEEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEeCCCC
Confidence 5689999999999999864432 358889999998754
No 149
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=90.92 E-value=0.68 Score=39.14 Aligned_cols=93 Identities=20% Similarity=0.107 Sum_probs=53.3
Q ss_pred CCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008312 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (570)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 163 (570)
..|..+.+... .+++.++|.-... |. .++ ..=+|+|.. .+..+..+... + .+-
T Consensus 9 ~pP~~l~v~~~--~~sv~L~W~pP~~--~~--~~I----~gY~vey~~-~~~~W~~~~~~---~-------------~~~ 61 (108)
T 1v5j_A 9 SPPRGLVAVRT--PRGVLLHWDPPEL--VP--KRL----DGYVLEGRQ-GSQGWEVLDPA---V-------------AGT 61 (108)
T ss_dssp CCCEEEEEEEC--SSSEEEEEECCSC--CS--SCC----CBEEEEEEE-TTCCCEEEEEE---E-------------CSS
T ss_pred CCCcceEEEEe--CCEEEEEECCCCC--CC--CCC----cEEEEEEEe-CCCCcEEeeee---c-------------CCC
Confidence 46888877653 4789999987542 11 011 223678876 33223322211 1 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCC---CccceeEEEcCCCCC
Q 008312 164 IHHVRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTMPDSS 203 (570)
Q Consensus 164 ~h~v~ltgL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~~ 203 (570)
..+..|.+|+|+++|.+||..-+.. ..|+...++|....+
T Consensus 62 ~t~~~v~~L~pg~~Y~FRV~A~n~~G~s~pS~~~~v~T~~~~~ 104 (108)
T 1v5j_A 62 ETELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGLSG 104 (108)
T ss_dssp CCEEECCCCCTTSCEECCBEEEETTEEEEECSCCCCCCSSCSS
T ss_pred cCEEEeCCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEeCCccc
Confidence 2355789999999999998544322 445566666654433
No 150
>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=90.75 E-value=1.2 Score=37.65 Aligned_cols=35 Identities=11% Similarity=0.037 Sum_probs=26.0
Q ss_pred EEEeCCCCCCCEEEEEEecCC---CCCccceeEEEcCCC
Q 008312 166 HVRLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRTMPD 201 (570)
Q Consensus 166 ~v~ltgL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~p~ 201 (570)
.+.+. |+|+|.|.+||..-+ .+.+|+...|+|...
T Consensus 74 ~~~~~-L~~~t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~~ 111 (117)
T 1wj3_A 74 SAELV-LPIKEDYIIEVKATTDGGDGTSSEQIRIPRITS 111 (117)
T ss_dssp EEEEE-CCCSSCEEEEEEEEESSCCCCBCCCEEECCCCC
T ss_pred EEEEE-CCCCCEEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 45666 999999999985332 236788888998754
No 151
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=90.73 E-value=0.59 Score=43.34 Aligned_cols=22 Identities=27% Similarity=0.347 Sum_probs=18.4
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPS 186 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~ 186 (570)
.+++|+||+|+|.|.++|..-+
T Consensus 157 t~~~l~gL~p~t~Y~~~V~A~~ 178 (195)
T 2qbw_A 157 STATISGLKPGVDYTITVYAYS 178 (195)
T ss_dssp SEEEECSCCTTCEEEEEEEEES
T ss_pred CEEEeCCCCCCCEEEEEEEEEe
Confidence 4678999999999999986543
No 152
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}
Probab=90.49 E-value=0.59 Score=38.00 Aligned_cols=71 Identities=20% Similarity=0.278 Sum_probs=41.4
Q ss_pred CCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCC-ceEEEeEEEEeeeecccCCccccccCe
Q 008312 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQL-NRKATGRSLVYSQLYPFLGLQNYTSGI 163 (570)
Q Consensus 85 ~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~-~~~a~g~~~~y~~~~p~~g~~~~~~~~ 163 (570)
.|..+++.-- ..+++.|+|.-.... ...=.|+|....+.. ..... . ++-
T Consensus 7 ~P~~l~v~~~-t~~Si~lsW~~p~~~-----------i~~Y~v~y~~~~~~~~~~~~~---------v---------~~~ 56 (97)
T 3qht_C 7 VPTKLEVVAA-TPTSLLISWDASSSS-----------VSYYRITYGETGGNSPVQEFT---------V---------PGS 56 (97)
T ss_dssp SSSSCEEEEE-ETTEEEEECCCCCSS-----------CCEEEEEEEESSSCSCCEEEE---------E---------ETT
T ss_pred CCCceEEEec-CCCEEEEEEeCCCCC-----------CCEEEEEEEECCCCCccEEEE---------e---------CCC
Confidence 5777776543 368999999753210 012346666543321 11100 0 111
Q ss_pred EEEEEeCCCCCCCEEEEEEecC
Q 008312 164 IHHVRLTGLKPDTLYHYQCGDP 185 (570)
Q Consensus 164 ~h~v~ltgL~P~T~Y~Yrvg~~ 185 (570)
...+.|+||+|+|.|.++|..-
T Consensus 57 ~t~~~l~~L~p~t~Y~v~V~A~ 78 (97)
T 3qht_C 57 SSTATISGLSPGVDYTITVYAY 78 (97)
T ss_dssp CCEEEECSCCTTCEEEEEEEEE
T ss_pred cCEEEeCCCCCCCEEEEEEEEE
Confidence 2467899999999999998654
No 153
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=90.30 E-value=2 Score=41.35 Aligned_cols=101 Identities=16% Similarity=0.212 Sum_probs=56.3
Q ss_pred CCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008312 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (570)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 163 (570)
..|.++.+.-.. .+++.|+|.-.. +. ...=.|+|.......... .... ...
T Consensus 16 ~~P~~l~~~~~~-~~sv~l~W~~~~---~~--------~~~Y~v~~~~~~~~~~~~----~~~~-------------~~~ 66 (283)
T 1tdq_A 16 DGPTQILVRDVS-DTVAFVEWTPPR---AK--------VDFILLKYGLVGGEGGKT----TFRL-------------QPP 66 (283)
T ss_dssp CCCEEEEEEEEC-SSCEEEEEECCS---SC--------CSEEEEEEEESSSSCCCE----EEEE-------------CTT
T ss_pred CCCcEEEEEecC-CCeEEEEEECCC---Cc--------eeEEEEEEEEecCCCCcE----EEEe-------------CCC
Confidence 468888776544 689999998643 10 122367775432211110 0000 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCcc--ceeEEEcCCCCCCCCCCeEEEEEec
Q 008312 164 IHHVRLTGLKPDTLYHYQCGDPSIPAMS--GTYCFRTMPDSSSTSYPSRIAIVGD 216 (570)
Q Consensus 164 ~h~v~ltgL~P~T~Y~Yrvg~~~~~~~S--~~~~F~T~p~~~~~~~~~rf~vigD 216 (570)
...+.|++|+|+|.|.++|...+..+.| ....|+|.|.+.. .+++..+++
T Consensus 67 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~t~p~~P~---~l~~~~~~~ 118 (283)
T 1tdq_A 67 LSQYSVQALRPGSRYEVSISAVRGTNESDASSTQFTTEIDAPK---NLRVGSRTA 118 (283)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCE---EEEEEEECS
T ss_pred CCEEEecCCCCCCEEEEEEEEECCCCCCCCeeEEEECCCCCCC---ceEEEecCC
Confidence 2356789999999999998654433333 3556777655421 345544444
No 154
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=89.98 E-value=1.3 Score=44.70 Aligned_cols=90 Identities=11% Similarity=0.066 Sum_probs=52.5
Q ss_pred CCCceEEEeecCCCC-ceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccC
Q 008312 84 FEPEQISVSLSSAHD-SVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (570)
Q Consensus 84 ~~P~qi~lt~~~~p~-s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 162 (570)
..|..+.+.-.. .+ ++.|+|.-... | ....=.|+|....+........ .. .+
T Consensus 4 ~~P~~l~~~~~~-~~~sv~l~W~~~~~--~--------~~~~Y~v~~~~~~~~~~~~~~~---~~-------------~~ 56 (375)
T 3t1w_A 4 SPPTNLHLEANP-DTGVLTVSWERSTT--P--------DITGYRITTTPTNGQQGNSLEE---VV-------------HA 56 (375)
T ss_dssp CCCEEEEEEEET-TTTEEEEEEECCSC--S--------SCCEEEEEEEETTCTTSCCEEE---EE-------------ET
T ss_pred CCCCccEEEecC-CCeEEEEEEeCCCC--C--------CeeeEEEEEEECCCCCCcceeE---Ec-------------CC
Confidence 357888776544 45 99999986431 1 1122356776544321110000 00 01
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCCCCccceeEEEcCC
Q 008312 163 IIHHVRLTGLKPDTLYHYQCGDPSIPAMSGTYCFRTMP 200 (570)
Q Consensus 163 ~~h~v~ltgL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p 200 (570)
-...+.|++|+|+|.|.|+|...+..+.|....+++.+
T Consensus 57 ~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~ 94 (375)
T 3t1w_A 57 DQSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIP 94 (375)
T ss_dssp TCCEEEECCCCTTCCEEEEEEEEETTEECCCEEEEECC
T ss_pred CccEEEEcCCcCCCEEEEEEEEEcCCCCCCcEEeeEcC
Confidence 12456789999999999998765545667666666543
No 155
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=89.83 E-value=1.7 Score=42.26 Aligned_cols=100 Identities=20% Similarity=0.101 Sum_probs=54.4
Q ss_pred CCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008312 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (570)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 163 (570)
..|..+.+.-. ..+++.|+|.-.... ...=.|+|....+...... .. ...
T Consensus 114 ~~P~~l~~~~~-~~~sv~l~W~~p~~~-----------~~~Y~v~~~~~~~~~~~~~-----~~-------------~~~ 163 (290)
T 3r8q_A 114 SPPRRARVTDA-TETTITISWRTKTET-----------ITGFQVDAVPANGQTPIQR-----TI-------------KPD 163 (290)
T ss_dssp CCCEEEEEEEE-CSSCEEEEEECCSCC-----------CCEEEEEEEESSSCCCEEE-----EE-------------CTT
T ss_pred CCCceeEEEEc-CCCeEEEEEeCCCCc-----------ccEEEEEEEECCCCcceEE-----ec-------------CCC
Confidence 46777777633 368999999864210 1223566655433221110 00 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCccc--eeEEEcCCCCCCCCCCeEEEEEec
Q 008312 164 IHHVRLTGLKPDTLYHYQCGDPSIPAMSG--TYCFRTMPDSSSTSYPSRIAIVGD 216 (570)
Q Consensus 164 ~h~v~ltgL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~p~~~~~~~~~rf~vigD 216 (570)
...+.|+||+|+|.|.++|..-+..+.|. ...++|.|.+.. .+++..+++
T Consensus 164 ~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~p~~P~---~l~~~~~~~ 215 (290)
T 3r8q_A 164 VRSYTITGLQPGTDYKIYLYTLNDNARSSPVVIDASTAIDAPS---NLRFLATTP 215 (290)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCE---EEEEEEEET
T ss_pred ccEEEECCCCCCCEEEEEEEEEeCCcccCCEEEEecCCCCCCC---ccEEEeeCC
Confidence 23467899999999999986544334443 445566654321 345544443
No 156
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.34 E-value=1.4 Score=37.05 Aligned_cols=88 Identities=10% Similarity=0.058 Sum_probs=47.4
Q ss_pred CCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCeE
Q 008312 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (570)
Q Consensus 85 ~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 164 (570)
.|.++++.-.. +++.|+|.-....-|. + ..=.|+|..... ..... .. ..-.
T Consensus 20 ~P~~l~~~~~~--~sv~l~W~~P~~~ng~-i-------~gY~i~y~~~~~-~~~~~-----~~-------------~~~~ 70 (116)
T 2edb_A 20 QPSSLHVRPQT--NCIIMSWTPPLNPNIV-V-------RGYIIGYGVGSP-YAETV-----RV-------------DSKQ 70 (116)
T ss_dssp CCSCEEEEECS--SCEEEEECCCSCTTBC-C-------CEEEEEEEESST-TSEEE-----EE-------------ETTC
T ss_pred CCCCeEEEECC--CEEEEEEcCCCCCCCc-e-------eEEEEEEEeCCC-CeEEE-----Ee-------------CCCe
Confidence 68888776553 8999999764321110 0 123466654221 11110 00 0112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCccc--eeEEEcCCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPSIPAMSG--TYCFRTMPD 201 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~p~ 201 (570)
..++|++|+|+|.|.+||...+..+.++ ...++|.+.
T Consensus 71 ~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~~~~~~~T~~~ 109 (116)
T 2edb_A 71 RYYSIERLESSSHYVISLKAFNNAGEGVPLYESATTRSI 109 (116)
T ss_dssp CEEEECSCCSSSBEEEEEEEEETTEECSCEEECCBCCCS
T ss_pred eEEEeCCCCCCCEEEEEEEEEeCCccCCCCcceeecccC
Confidence 3568899999999999986544333332 233455443
No 157
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=89.30 E-value=1.6 Score=40.00 Aligned_cols=92 Identities=14% Similarity=0.132 Sum_probs=51.0
Q ss_pred CCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCC-CceEEEeEEEEeeeecccCCccccccC
Q 008312 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQ-LNRKATGRSLVYSQLYPFLGLQNYTSG 162 (570)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~-~~~~a~g~~~~y~~~~p~~g~~~~~~~ 162 (570)
..|..+.+.- ..+++.|+|.-.... +.. ...=.|+|....+. .+...... .+ +
T Consensus 7 ~~P~~~~~~~--~~~sv~l~W~~p~~~-~~~-------i~~Y~v~~~~~~~~~~w~~~~~~-------~~--~------- 60 (205)
T 1cfb_A 7 NAPKLTGITC--QADKAEIHWEQQGDN-RSP-------ILHYTIQFNTSFTPASWDAAYEK-------VP--N------- 60 (205)
T ss_dssp CCCEEEEEEE--CSSEEEEEEECCCCT-TSC-------CCEEEEEEEESSSTTCCEEEEEE-------EE--T-------
T ss_pred CCCCCcEEEe--cCCEEEEEEECcccC-CCc-------eEEEEEEEecCCCCCCceeeeec-------cC--C-------
Confidence 3688888877 579999999864211 110 11235677654321 12111111 00 0
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCC---CCcc-ceeEEEcCCCC
Q 008312 163 IIHHVRLTGLKPDTLYHYQCGDPSI---PAMS-GTYCFRTMPDS 202 (570)
Q Consensus 163 ~~h~v~ltgL~P~T~Y~Yrvg~~~~---~~~S-~~~~F~T~p~~ 202 (570)
......+ +|+|+|.|.|||..-+. +.+| ....++|.+..
T Consensus 61 ~~~~~~~-~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~~T~~~~ 103 (205)
T 1cfb_A 61 TDSSFVV-QMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDV 103 (205)
T ss_dssp TCSEEEE-ECCSSEEEEEEEEEEETTEECCCCCCCCCEEECCCC
T ss_pred CceEEEE-eCCCCCEEEEEEEEEECCccCCCCCCceeEEcCCcC
Confidence 1113346 99999999999864332 2455 45678886543
No 158
>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.24 E-value=0.15 Score=42.29 Aligned_cols=74 Identities=19% Similarity=0.235 Sum_probs=42.1
Q ss_pred CCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008312 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (570)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 163 (570)
..|.++++.--. .+++.|+|.-....+ ..=.|+|.......... . .. ..+-
T Consensus 9 ~~P~~l~v~~~t-~~si~lsW~~p~g~i-----------~~Y~v~y~~~~~~~~~~------~--~~---------v~~~ 59 (105)
T 2ekj_A 9 SPPSNLALASET-PDSLQVSWTPPLGRV-----------LHYWLTYAPASGLGPEK------S--VS---------VPGA 59 (105)
T ss_dssp CCCEEEEEEEEE-TTEEEEEEECCSSCC-----------SBBCBBCCCTTSCSCCC------C--BC---------CBTT
T ss_pred CCCCceEEEeCC-CCEEEEEEeCCCCcc-----------eEEEEEEEECCCCCccE------E--EE---------eCCC
Confidence 358888776433 689999998753110 11234554432211000 0 00 0112
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 008312 164 IHHVRLTGLKPDTLYHYQCGDPS 186 (570)
Q Consensus 164 ~h~v~ltgL~P~T~Y~Yrvg~~~ 186 (570)
...++|+||+|+|.|.++|..-+
T Consensus 60 ~~~~~l~~L~p~t~Y~~~V~A~~ 82 (105)
T 2ekj_A 60 RSHVTLPDLQAATKYRVLVSAIY 82 (105)
T ss_dssp SSEEEECSCCSSCCCBCBBCBBC
T ss_pred cCEEEeCCCCCCCEEEEEEEEEe
Confidence 24678999999999999986554
No 159
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=88.66 E-value=2.2 Score=35.57 Aligned_cols=22 Identities=27% Similarity=0.341 Sum_probs=18.6
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPS 186 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~ 186 (570)
..++|++|+|+|.|.+||...+
T Consensus 74 ~~~~i~~L~p~t~Y~~~V~A~n 95 (119)
T 1wfn_A 74 LEYRVTGLTALTTYTIEVAAMT 95 (119)
T ss_dssp CEEEEESCCTTCEEEEEEEEEC
T ss_pred eEEEEcCCCCCCEEEEEEEEEc
Confidence 4678899999999999997554
No 160
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=88.57 E-value=1.5 Score=40.45 Aligned_cols=79 Identities=20% Similarity=0.202 Sum_probs=44.3
Q ss_pred CCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCeE
Q 008312 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (570)
Q Consensus 85 ~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 164 (570)
.|..+.+.-.. .+++.|+|.-... | ....=.|+|....+..... .... .+-.
T Consensus 116 ~P~~l~~~~~~-~~sv~l~W~~p~~--~--------~i~~Y~v~~~~~~~~~~~~----~~~~-------------~~~~ 167 (203)
T 2gee_A 116 PPTDLRFTNIG-PDTMRVTWAPPPS--I--------DLTNFLVRYSPVKNEEDVA----ELSI-------------SPSD 167 (203)
T ss_dssp CCEEEEEEEEE-TTEEEEEEECCSS--C--------CCSEEEEEEEETTCGGGCE----EEEE-------------CTTC
T ss_pred CCCceEEEEcC-CCEEEEEEcCCCC--C--------CccEEEEEEEECCCCCccE----EEEc-------------CCCc
Confidence 57888764433 5899999986431 1 0122356666533221111 0000 1123
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCcc
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPSIPAMS 191 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~~~~~S 191 (570)
..+.|+||+|+|.|.++|..-+..+.|
T Consensus 168 ~~~~i~~L~p~t~Y~~~V~A~~~~g~s 194 (203)
T 2gee_A 168 NAVVLTNLLPGTEYVVSVSSVYEQHES 194 (203)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTEEC
T ss_pred CEEEECCCCCCCEEEEEEEEecCCCcC
Confidence 456889999999999998755433333
No 161
>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}
Probab=88.09 E-value=2.6 Score=40.36 Aligned_cols=33 Identities=15% Similarity=0.277 Sum_probs=21.4
Q ss_pred EEeCCCCCCCEEEEEEecCCCC---CccceeEEEcC
Q 008312 167 VRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTM 199 (570)
Q Consensus 167 v~ltgL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~ 199 (570)
-+++||+|+|.|.|||..-+.. ...+...+||.
T Consensus 202 yt~~gLk~~TeYsF~V~A~d~~G~~Ss~e~vtVrTl 237 (238)
T 2w1n_A 202 YTFKKLNRHTIYNFKIAAKYSNGEVSSKESLTLRTA 237 (238)
T ss_dssp EEECSCCTTCEEEEEEEEEETTSCBCCCEEEEEECC
T ss_pred EEecCCCCCCEEEEEEEEEeCCCCccccCcEEEEec
Confidence 3679999999999998533211 22245556654
No 162
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=87.98 E-value=2 Score=43.30 Aligned_cols=37 Identities=22% Similarity=0.228 Sum_probs=26.9
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---CccceeEEEcCCCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTMPDS 202 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~ 202 (570)
..+.|++|+|+|.|.|||...+.. .+| ...|+|.+.+
T Consensus 349 ~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s-~~~~~T~~~P 388 (389)
T 2jll_A 349 DHIILEHLQWTMGYEVQITAANRLGYSEPT-VYEFSMPPKP 388 (389)
T ss_dssp CEEEECSCCTTCEEEEEEEEEC-CCBCCCE-EEEEECCCCC
T ss_pred ceEEeCCcCCCCEEEEEEEEEcCCcCCCce-eeEecCCCCC
Confidence 456889999999999998654433 334 4488888764
No 163
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=87.77 E-value=0.91 Score=48.90 Aligned_cols=97 Identities=16% Similarity=0.167 Sum_probs=57.1
Q ss_pred CCCCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCcccccc
Q 008312 82 EGFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTS 161 (570)
Q Consensus 82 ~~~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~ 161 (570)
.+..|..+++.-. .++++.|+|.......|. ...=.|+|.......... . .... + ..
T Consensus 386 ~P~PP~nl~v~~~-s~~sl~LsW~pP~~~~g~--------~l~YeV~Yr~~~~~~w~~-~---~~~~------~----~~ 442 (488)
T 2q7n_A 386 APHDPTSLKVKDI-NSTVVTFSWYLPGNFTKI--------NLLCQIEICKANSKKEVR-N---ATIR------G----AE 442 (488)
T ss_dssp CCCCCEEEEEEEC-STTCEEEEEEEEEECSSS--------EEEEEEEEBCTTSCCEEE-E---EEEE------C----CE
T ss_pred CCCCCeEEEEEec-CCCEEEEEEeCCCCCCCc--------ceEEEEEEEECCCCCceE-E---EEEe------c----CC
Confidence 3456888877543 478999999875422110 112356776654322111 0 0000 0 00
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecCC--C---CCccceeEEEcCCC
Q 008312 162 GIIHHVRLTGLKPDTLYHYQCGDPS--I---PAMSGTYCFRTMPD 201 (570)
Q Consensus 162 ~~~h~v~ltgL~P~T~Y~Yrvg~~~--~---~~~S~~~~F~T~p~ 201 (570)
.-.+.+.|.+|+|+|.|..||.... . +.||+...|+|++.
T Consensus 443 ~~~~~v~l~~L~P~T~Y~~rVRA~~~g~G~WS~WS~~v~~~T~e~ 487 (488)
T 2q7n_A 443 DSTYHVAVDKLNPYTAYTFRVRCSSKTFWKWSRWSDEKRHLTTEA 487 (488)
T ss_dssp EEEEEEEECSCCSSCCBBCCEEEEESSCSSCCCCCCCCCBCCCCC
T ss_pred CcEEEEEeCCCCCCceEEEEEEEEECCCCCCCCCcCCEeEECCCC
Confidence 1246679999999999999875332 1 36888889998764
No 164
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=87.75 E-value=1.4 Score=36.22 Aligned_cols=76 Identities=18% Similarity=0.205 Sum_probs=42.5
Q ss_pred CCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008312 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (570)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 163 (570)
..|..+++.-- +.+++.|+|.-....-| ....=.|+|.......... . .. . ++-
T Consensus 9 ~~P~~l~v~~~-t~~Sv~lsW~~p~~~~g--------~i~~Y~v~y~~~~~~~~~~---~-~~----v---------~~~ 62 (103)
T 3t04_D 9 SVPTKLEVVDA-TPTSLKISWDAYYSSWQ--------NVKYYRITYGETGGDSPVQ---E-FT----V---------PGY 62 (103)
T ss_dssp CCCCSCEEEEE-ETTEEEEECTTTTTTSC--------CCCEEEEEEEETTCSSCCE---E-EE----E---------ETT
T ss_pred CCCceeEEEec-CCCEEEEEccCCCCCCC--------ccceEEEEEEECCCCCccE---E-EE----c---------CCC
Confidence 35778777543 36899999975431101 0112256676543211110 0 00 0 111
Q ss_pred EEEEEeCCCCCCCEEEEEEecC
Q 008312 164 IHHVRLTGLKPDTLYHYQCGDP 185 (570)
Q Consensus 164 ~h~v~ltgL~P~T~Y~Yrvg~~ 185 (570)
..+++|+||+|+|.|.++|...
T Consensus 63 ~ts~~l~~L~p~t~Y~~~V~A~ 84 (103)
T 3t04_D 63 YSTATISGLKPGVDYTITVYAY 84 (103)
T ss_dssp CCEEEECSCCTTCCEEEEEEEE
T ss_pred cCEEEeCCCCCCCEEEEEEEEE
Confidence 2467899999999999998754
No 165
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=87.24 E-value=2.9 Score=38.14 Aligned_cols=91 Identities=7% Similarity=-0.029 Sum_probs=49.2
Q ss_pred CCCceEEEeecCCCCceEEEEEeCcc--cccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCcccccc
Q 008312 84 FEPEQISVSLSSAHDSVWISWITGEF--QIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTS 161 (570)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~I~W~T~~~--~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~ 161 (570)
..|..+.+.-. .++++.|+|.-... .-|. ...=.|+|............. . ..
T Consensus 106 ~~P~~~~~~~~-~~~sv~l~W~~p~~~~~ng~--------i~~Y~v~~~~~~~~~~~~~~~---~-------------~~ 160 (205)
T 1cfb_A 106 KNPDNVVGQGT-EPNNLVISWTPMPEIEHNAP--------NFHYYVSWKRDIPAAAWENNN---I-------------FD 160 (205)
T ss_dssp CCCSCCEEECS-STTCEEEECCCCCGGGTCSS--------SCEEEEEEEESSTTCCCEEEE---E-------------CC
T ss_pred CCCeeeEeecC-CCCeEEEEEECCCccccCCC--------ceEEEEEEEECCCCCCcEEEE---e-------------cC
Confidence 45777776543 36899999986431 1110 112356665544332111000 0 00
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecCCCC---C-ccceeEEEcC
Q 008312 162 GIIHHVRLTGLKPDTLYHYQCGDPSIP---A-MSGTYCFRTM 199 (570)
Q Consensus 162 ~~~h~v~ltgL~P~T~Y~Yrvg~~~~~---~-~S~~~~F~T~ 199 (570)
.....+.|+||+|+|.|.+||..-+.. . .|+...++|.
T Consensus 161 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~ 202 (205)
T 1cfb_A 161 WRQNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSG 202 (205)
T ss_dssp TTCCEEEECSCCSSCEEEEEEEEEETTEECSSCCCCEEEESS
T ss_pred CCccEEEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEEecC
Confidence 112456789999999999998644322 2 3455566664
No 166
>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A
Probab=86.04 E-value=0.93 Score=37.42 Aligned_cols=28 Identities=18% Similarity=0.132 Sum_probs=20.1
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCccc
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPSIPAMSG 192 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~~~~~S~ 192 (570)
..+.|+||+|+|.|...|-.-.....|.
T Consensus 59 ~s~~l~~L~PgT~Y~V~v~a~~~~~~S~ 86 (95)
T 2h41_A 59 TSVNIPDLLPGRKYIVNVYQISEDGEQS 86 (95)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTSCEE
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCCccc
Confidence 4678999999999999886433223443
No 167
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=86.02 E-value=2.1 Score=39.33 Aligned_cols=22 Identities=23% Similarity=0.218 Sum_probs=18.1
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPS 186 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~ 186 (570)
..+.|+||+|+|.|.+||...+
T Consensus 165 ~~~~i~~L~p~t~Y~~~V~A~n 186 (209)
T 2vkw_A 165 DHVMLKSLDWNAEYEVYVVAEN 186 (209)
T ss_dssp CEEEECSCCTTCEEEEEEEEEE
T ss_pred cEEEecCCCCCCEEEEEEEEEe
Confidence 3567999999999999986544
No 168
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=86.02 E-value=3.8 Score=40.76 Aligned_cols=92 Identities=13% Similarity=0.028 Sum_probs=53.2
Q ss_pred CCCCceEEEeecC-CCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCcccccc
Q 008312 83 GFEPEQISVSLSS-AHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTS 161 (570)
Q Consensus 83 ~~~P~qi~lt~~~-~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~ 161 (570)
+..|..+.+.... +++++.|+|.-.....+. . + ...=.|+|.......+..+.- .
T Consensus 197 P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~-~----~-~~~Y~V~yr~~~~~~W~~~~~------------------~ 252 (325)
T 1n26_A 197 PDPPANITVTAVARNPRWLSVTWQDPHSWNSS-F----Y-RLRFELRYRAERSKTFTTWMV------------------K 252 (325)
T ss_dssp CCCCEEEEEEECTTCTTCEEEEEECCTTCCCS-S----S-CEEEEEEEEETTCSCCEEEEC------------------G
T ss_pred CCCCcceEEEEecCCCCEEEEEECCCCccCCC-c----E-eEEEEEEEEeCCCCCCEEEcc------------------c
Confidence 4568888887654 468999999875421000 0 0 022357776654332222110 0
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecCCC------CCccceeEEEc
Q 008312 162 GIIHHVRLTGLKPDTLYHYQCGDPSI------PAMSGTYCFRT 198 (570)
Q Consensus 162 ~~~h~v~ltgL~P~T~Y~Yrvg~~~~------~~~S~~~~F~T 198 (570)
..-..+.|.+|+|+|.|.+||...+. +.||+...++|
T Consensus 253 ~~~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~~~~~ 295 (325)
T 1n26_A 253 DLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTP 295 (325)
T ss_dssp GGCSEEEESSCCTTCCEEEEEEEEETTTBSCCCCCCCCEEECC
T ss_pred CCceEEEEeCCCCCCeEEEEEEEecCCCCCCCcCCCCccceec
Confidence 01135678999999999999864431 25666666655
No 169
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=85.75 E-value=2.5 Score=38.62 Aligned_cols=88 Identities=19% Similarity=0.261 Sum_probs=48.3
Q ss_pred CCceEEEee-cCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCC-ceEEEeEEEEeeeecccCCccccccC
Q 008312 85 EPEQISVSL-SSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQL-NRKATGRSLVYSQLYPFLGLQNYTSG 162 (570)
Q Consensus 85 ~P~qi~lt~-~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~-~~~a~g~~~~y~~~~p~~g~~~~~~~ 162 (570)
.|.++.++- +..++++.|+|.-.. +.. ...=.|+|....... ...+ .. .+
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~---~~~-------i~~Y~v~~~~~~~~~~~~~~-----~~-------------~~ 53 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQ---PSH-------ISKYILRWRPKNSVGRWKEA-----TI-------------PG 53 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCS---STT-------CCEEEEEEEETTCSSCCEEE-----EE-------------CT
T ss_pred CceeEEEEecCCCCCEEEEEEeCCC---CCC-------ceEEEEEEEECCCCCceEEE-----ec-------------CC
Confidence 477776643 223689999998642 111 122356676543211 1111 00 01
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCCCCcc--ceeEEEcCC
Q 008312 163 IIHHVRLTGLKPDTLYHYQCGDPSIPAMS--GTYCFRTMP 200 (570)
Q Consensus 163 ~~h~v~ltgL~P~T~Y~Yrvg~~~~~~~S--~~~~F~T~p 200 (570)
-...+.|+||+|+|.|.+||..-+..+.+ ....|+|..
T Consensus 54 ~~~~~~i~~L~p~t~Y~~~V~a~n~~G~~~~~~~~~~t~~ 93 (201)
T 2ha1_A 54 HLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTS 93 (201)
T ss_dssp TCCEEEECSCCTTEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred CccEEEecCCCCCCEEEEEEEEEecccccCceeEEEecCC
Confidence 12367899999999999998755432322 244566643
No 170
>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}
Probab=85.58 E-value=2.5 Score=39.39 Aligned_cols=77 Identities=16% Similarity=0.166 Sum_probs=42.2
Q ss_pred CCCCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCC-CCceEEEeEEEEeeeecccCCccccc
Q 008312 82 EGFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRS-QLNRKATGRSLVYSQLYPFLGLQNYT 160 (570)
Q Consensus 82 ~~~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~-~~~~~a~g~~~~y~~~~p~~g~~~~~ 160 (570)
.+..|..+++.....++++.|+|...... . ....-.|+|....+ .....+. ..
T Consensus 109 kp~pP~~l~v~~~~~~~~l~l~W~~P~~~--~-------~~l~yev~y~~~~~~~~w~~~~-~~---------------- 162 (206)
T 3v6o_A 109 KPLPPSSVKAEITINIGLLKISWEKPVFP--E-------NNLQFQIRYGLSGKEVQWKMYE-VY---------------- 162 (206)
T ss_dssp CCCCCCSCEEEEETTTTEEEEEC-----------------CEEEEEEEEESSSSCCCEEEE-EC----------------
T ss_pred cCCCCCceEeEEecCCCeEEEEECCCCCC--C-------CcEEEEEEEEECCCCCceEEEe-cc----------------
Confidence 34568888877665578999999874321 0 01234567766542 1221111 00
Q ss_pred cCeEEEEEeCCCCCCCEEEEEEec
Q 008312 161 SGIIHHVRLTGLKPDTLYHYQCGD 184 (570)
Q Consensus 161 ~~~~h~v~ltgL~P~T~Y~Yrvg~ 184 (570)
..-...+.|.+|+|+|.|..||..
T Consensus 163 ~~~~~~~~l~~L~p~t~Y~vqVRa 186 (206)
T 3v6o_A 163 DAKSKSVSLPVPDLCAVYAVQVRC 186 (206)
T ss_dssp C---CEEEECCSCTTSCEEEEEEE
T ss_pred cCcceeEEeecCCCCCEEEEEEEE
Confidence 001235789999999999999864
No 171
>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=85.33 E-value=0.9 Score=39.05 Aligned_cols=38 Identities=21% Similarity=0.124 Sum_probs=29.6
Q ss_pred EEEEeCCCCCCCEEEEEEecCC---CCCccceeEEEcCCCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRTMPDS 202 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~p~~ 202 (570)
.++.|+||+|+|.|.++|..-+ .+..|+...|+|+...
T Consensus 75 ~~~~l~~L~p~T~Y~~~V~A~n~~G~Gp~S~~v~~~T~e~v 115 (120)
T 1ujt_A 75 RSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEES 115 (120)
T ss_dssp CEEEEESCCSSEEEEEEEEEESSSCCCCCCCCEEEEECSSC
T ss_pred CEEEECCCCCCCEEEEEEEEECCCccCCCCCCEEEECCCCC
Confidence 4678999999999999985332 2367888999997543
No 172
>3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A*
Probab=85.30 E-value=1.4 Score=46.37 Aligned_cols=74 Identities=19% Similarity=0.246 Sum_probs=43.5
Q ss_pred CCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCeE
Q 008312 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (570)
Q Consensus 85 ~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 164 (570)
.|..+++.-.. ++|+.|+|..... |. + ..=.|+|......... .+... .+--
T Consensus 372 ~~~~l~~~~~~-~~s~~l~W~~p~~--~~-~-------~~y~v~y~~~~~~~~~-------~~~~~----------~~~~ 423 (461)
T 3csg_A 372 VPTNLEVVAAT-PTSLLISWDASYS--SS-V-------SYYRITYGETGGNSPV-------QEFTV----------PGSK 423 (461)
T ss_dssp SSCCCEEEEEC-SSCEEEECCCTTG--GG-C-------SEEEEEEEETTCCSCC-------EEEEE----------ETTC
T ss_pred CCcceEEeccC-CCeEEEEecCCCC--Cc-c-------eEEEEEEEECCCCccc-------eEEEe----------cCCC
Confidence 57788776544 7899999975411 11 1 1234666554321100 11110 1112
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPS 186 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~ 186 (570)
.+|+|+||+|+|+|..||..-.
T Consensus 424 ~~~~i~~L~p~t~Y~~~v~a~~ 445 (461)
T 3csg_A 424 STATISGLSPGVDYTITVYAYS 445 (461)
T ss_dssp CEEEECSCCTTCEEEEEEEEEC
T ss_pred ceEEecCCCCCCEEEEEEEEEe
Confidence 5789999999999999997554
No 173
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}
Probab=85.17 E-value=0.8 Score=49.30 Aligned_cols=97 Identities=16% Similarity=0.132 Sum_probs=57.3
Q ss_pred CCCCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCcccccc
Q 008312 82 EGFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTS 161 (570)
Q Consensus 82 ~~~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~ 161 (570)
.+..|..+.+... .++++.|+|.......+ ....=.|+|....+..... .++ ..+. .
T Consensus 381 kP~PP~nl~v~~~-~stsl~LsW~~P~~~~~--------~~L~YeVrYr~~~~~~~~~------~vs----v~~~----~ 437 (483)
T 3e0g_A 381 YPHTPTSFKVKDI-NSTAVKLSWHLPGNFAK--------INFLCEIEIKKSNSVQEQR------NVT----IQGV----E 437 (483)
T ss_dssp CCCCCEEEEECCS-SSSSCCEEEECCSCCTT--------SBCCCEEEEECSSSCCCEE------ECC----CBCC----S
T ss_pred CCCCCeeeEEEEe-cCCeEEEEECCCCCCCC--------ceEEEEEEEEECCCCCceE------EEE----Eecc----C
Confidence 3456888877532 36889999987532111 1123468887765432111 010 0110 0
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecCCC-----CCccceeEEEcCCC
Q 008312 162 GIIHHVRLTGLKPDTLYHYQCGDPSI-----PAMSGTYCFRTMPD 201 (570)
Q Consensus 162 ~~~h~v~ltgL~P~T~Y~Yrvg~~~~-----~~~S~~~~F~T~p~ 201 (570)
.-.+.+.|.+|+|+|+|..||..... +.||+...|+|+.+
T Consensus 438 ~~~~s~~l~~L~PgT~Y~vrVRA~~~g~g~WSeWS~~~~f~T~E~ 482 (483)
T 3e0g_A 438 NSSYLVALDKLNPYTLYTFRIRCSTETFWKWSKWSNKKQHLTTEA 482 (483)
T ss_dssp SSBCCCCCCSCCSSSSCEEEEECCCSSCCCCCCCCCCCCCCCCCC
T ss_pred CceeEEEEeccCCCcEEEEEEEEeeCCCCCcCCCCCceeeECCCC
Confidence 12345678999999999999875532 36788889988653
No 174
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=84.33 E-value=2.9 Score=41.86 Aligned_cols=22 Identities=23% Similarity=0.356 Sum_probs=18.2
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPS 186 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~ 186 (570)
....|+||+|++.|.|+|..-+
T Consensus 329 ~~~~~~~L~p~t~Y~~~V~A~~ 350 (368)
T 1fnf_A 329 STATISGLKPGVDYTITVYAVT 350 (368)
T ss_dssp CEEEECSCCTTCCEEEEEEEEC
T ss_pred eEEEecCCCCCCEEEEEEEEeC
Confidence 3568899999999999986544
No 175
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=84.31 E-value=4 Score=45.49 Aligned_cols=34 Identities=21% Similarity=0.473 Sum_probs=23.5
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC----CccceeEEEcC
Q 008312 166 HVRLTGLKPDTLYHYQCGDPSIP----AMSGTYCFRTM 199 (570)
Q Consensus 166 ~v~ltgL~P~T~Y~Yrvg~~~~~----~~S~~~~F~T~ 199 (570)
++.|++|+|+|.|.|||...+.. ..+....|+|.
T Consensus 224 ~~~i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t~ 261 (680)
T 1zlg_A 224 RVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSS 261 (680)
T ss_pred eEEeCCCCCCCEEEEEEEEEeCCCCCCCCCCccceEcC
Confidence 46789999999999998654322 23345566763
No 176
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=83.52 E-value=0.9 Score=42.91 Aligned_cols=38 Identities=13% Similarity=0.195 Sum_probs=26.9
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---Cccc-eeEEEcCCCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPSIP---AMSG-TYCFRTMPDS 202 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~~~---~~S~-~~~F~T~p~~ 202 (570)
..+.|+||+|+|.|.+||...+.. .+|+ ...|+|.+..
T Consensus 160 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~~ 201 (234)
T 3f7q_A 160 RMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPKR 201 (234)
T ss_dssp CEEEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSCCC
T ss_pred eEEEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCCCC
Confidence 466889999999999998644322 3454 4678886553
No 177
>3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens}
Probab=83.26 E-value=4.1 Score=38.42 Aligned_cols=102 Identities=15% Similarity=0.188 Sum_probs=54.8
Q ss_pred CCCCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCcccccc
Q 008312 82 EGFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTS 161 (570)
Q Consensus 82 ~~~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~ 161 (570)
....|..+.+.. .+.+.|+|........ ...+. ....=.|+|....+.-...-.+. ... ..
T Consensus 100 kp~PP~nltv~~---~~~l~lsW~~P~~~p~--~~~~~-~~L~Yevryr~~~~~W~~~~~~~--~~~-----------~~ 160 (219)
T 3tgx_A 100 KPAPPFDVTVTF---SGQYQISWRSDYEDPA--FYMLK-GKLQYELQYRNRGDPWAVSPRRK--LIS-----------VD 160 (219)
T ss_dssp CCCCCEEEEEEE---SSSEEEEEECGGGSGG--GGGGT-TSEEEEEEEEETTSCTTSCCEEE--EEC-----------SS
T ss_pred EeCCCCceEEEe---CCCEEEEEeCCcCCcc--ccccc-cCEEEEEEEecCCCCceecccce--eEe-----------cC
Confidence 345688777763 3689999997532100 00000 01234577766543211100000 000 01
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecCCC---------CCccceeEEEcCCCC
Q 008312 162 GIIHHVRLTGLKPDTLYHYQCGDPSI---------PAMSGTYCFRTMPDS 202 (570)
Q Consensus 162 ~~~h~v~ltgL~P~T~Y~Yrvg~~~~---------~~~S~~~~F~T~p~~ 202 (570)
+....+.+.+|+|+|.|..||..... +.||+...|.|.+..
T Consensus 161 ~~~~~~~~~~L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~~~ 210 (219)
T 3tgx_A 161 SRSVSLLPLEFRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSEE 210 (219)
T ss_dssp CSEEEECTTSSCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC--
T ss_pred CCEEEEEeccCCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCchh
Confidence 23456678899999999999853221 257889999997753
No 178
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=83.07 E-value=5.1 Score=40.18 Aligned_cols=86 Identities=19% Similarity=0.070 Sum_probs=47.8
Q ss_pred CCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCC-CCceEEEeEEEEeeeecccCCccccccC
Q 008312 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRS-QLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (570)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~-~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 162 (570)
..|..+.+.-. +.+++.|+|.-.... ...=.|+|..... ...... .. .+
T Consensus 279 ~~P~~l~~~~~-~~~sv~l~W~~p~~~-----------~~~Y~v~~~~~~~~~~~~~~-----~~-------------~~ 328 (375)
T 3t1w_A 279 DSPTGIDFSDI-TANSFTVHWIAPRAT-----------ITGYRIRHHPEHFSGRPRED-----RV-------------PH 328 (375)
T ss_dssp CCCEEEEEESC-CSSCEEEEEECCSSC-----------CSEEEEEEEETTCCSSCEEE-----EE-------------ET
T ss_pred CCCCccEeeec-cCCEEEEEECCCCcc-----------eeeEEEEEEECCCCCcceeE-----Ec-------------CC
Confidence 35777766432 368899999864211 1223566665443 111110 00 01
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCCCCccc--eeEEEcC
Q 008312 163 IIHHVRLTGLKPDTLYHYQCGDPSIPAMSG--TYCFRTM 199 (570)
Q Consensus 163 ~~h~v~ltgL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~ 199 (570)
-.....|+||+|+|.|.+||..-+..+.|+ ...++|+
T Consensus 329 ~~~~~~i~~L~p~t~Y~~~V~A~~~~G~s~p~s~~~~~~ 367 (375)
T 3t1w_A 329 SRNSITLTNLTPGTEYVVSIVALNGREESPLLIGQQSTV 367 (375)
T ss_dssp TCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECC
T ss_pred CccEEEECCCCCCCEEEEEEEEECCCCCCCceeeeeEEe
Confidence 123568899999999999997554344443 4445554
No 179
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=82.78 E-value=3.1 Score=45.54 Aligned_cols=70 Identities=13% Similarity=0.161 Sum_probs=42.8
Q ss_pred CCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCeEEEEEeCCCCCCC
Q 008312 97 HDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGIIHHVRLTGLKPDT 176 (570)
Q Consensus 97 p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h~v~ltgL~P~T 176 (570)
.+++.++|.-....=|..+ ..=.|++...++..+..+. .. . .. ..+++||.||+
T Consensus 23 ~~sv~L~W~~P~~DGgs~I-------~~Y~vE~~~~~~~~W~~v~-~~---~-------------~t--~~~V~~L~~g~ 76 (573)
T 3uto_A 23 DEAVILSWKPPALDGGSLV-------TNYTIEKREAMGGSWSPCA-KS---R-------------YT--YTTIEGLRAGK 76 (573)
T ss_dssp SSCEEEEEECCSCCSSSCC-------CEEEEEEEESSSCCCEEEE-EE---S-------------SS--EEEECCCCTTC
T ss_pred CCEEEEEECCCCcCCCCcc-------cEEEEEEEECCCCceEEec-cc---c-------------CC--EEEeCCCCCCC
Confidence 5899999986432111111 1235677777666665542 21 0 01 24679999999
Q ss_pred EEEEEEecCCCCCccc
Q 008312 177 LYHYQCGDPSIPAMSG 192 (570)
Q Consensus 177 ~Y~Yrvg~~~~~~~S~ 192 (570)
.|.|||...+..++|+
T Consensus 77 ~Y~FRV~A~N~~G~s~ 92 (573)
T 3uto_A 77 QYEFRIIAENKHGQSK 92 (573)
T ss_dssp EEEEEEEEEETTEECC
T ss_pred cEeEEEEEEcCceEcC
Confidence 9999997665444443
No 180
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=82.77 E-value=3.9 Score=44.52 Aligned_cols=39 Identities=13% Similarity=0.089 Sum_probs=28.5
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCC------CccceeEEEcCCCC
Q 008312 164 IHHVRLTGLKPDTLYHYQCGDPSIP------AMSGTYCFRTMPDS 202 (570)
Q Consensus 164 ~h~v~ltgL~P~T~Y~Yrvg~~~~~------~~S~~~~F~T~p~~ 202 (570)
..+++|++|+|+|.|.+||...+.. ..|....++|.+.+
T Consensus 399 ~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~~ 443 (536)
T 3fl7_A 399 RTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTE 443 (536)
T ss_dssp SSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEECCSCC
T ss_pred cceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEEeecccC
Confidence 3567899999999999998654322 24567788887654
No 181
>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A
Probab=82.67 E-value=1.9 Score=41.32 Aligned_cols=35 Identities=17% Similarity=0.133 Sum_probs=26.2
Q ss_pred EEEEeCCCCCCCEEEEEEecCC-----CCCccceeEEEcC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPS-----IPAMSGTYCFRTM 199 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~-----~~~~S~~~~F~T~ 199 (570)
..+.|.+|+|+|+|..||.... -+.||+...|+|+
T Consensus 195 ~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p 234 (236)
T 1axi_B 195 TSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 234 (236)
T ss_dssp SEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred CEEEEeccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECC
Confidence 4568899999999999986432 2367777888764
No 182
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=82.32 E-value=1 Score=41.59 Aligned_cols=39 Identities=28% Similarity=0.375 Sum_probs=28.6
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDSS 203 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~~ 203 (570)
....|.+|+|++.|.|||...+. +.+|....|+|+|..+
T Consensus 173 ~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p~~g 214 (215)
T 3mtr_A 173 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVQG 214 (215)
T ss_dssp TEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC---
T ss_pred ccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEeccccC
Confidence 35678999999999999965432 3567788999988654
No 183
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=81.74 E-value=3.9 Score=37.43 Aligned_cols=23 Identities=22% Similarity=0.313 Sum_probs=19.0
Q ss_pred eEEEEEeCCCCCCCEEEEEEecC
Q 008312 163 IIHHVRLTGLKPDTLYHYQCGDP 185 (570)
Q Consensus 163 ~~h~v~ltgL~P~T~Y~Yrvg~~ 185 (570)
-...+.|++|+|+|.|.|||..-
T Consensus 68 ~~~~~~i~~L~p~t~Y~~~V~A~ 90 (214)
T 2ibg_A 68 KSFTASVTDLKPQHTYRFRILAV 90 (214)
T ss_dssp EEEEEEECSCCTTCEEEEEEEEE
T ss_pred cceeEEecCCcCCCEEEEEEEEE
Confidence 34567899999999999998653
No 184
>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C*
Probab=80.83 E-value=5.2 Score=36.89 Aligned_cols=86 Identities=13% Similarity=0.225 Sum_probs=51.7
Q ss_pred CCCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccC
Q 008312 83 GFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (570)
Q Consensus 83 ~~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 162 (570)
+..|..++++... ...+.|+|...... ....-.|+|....+..+..+.. .
T Consensus 99 P~pP~~l~~~~~~-~~~l~l~W~~p~~~----------~~l~yev~y~~~~~~~w~~~~~-------------------~ 148 (199)
T 2b5i_C 99 PWAPENLTLHKLS-ESQLELNWNNRFLN----------HCLEHLVQYRTDWDHSWTEQSV-------------------D 148 (199)
T ss_dssp CCCCEEEEEEEEE-TTEEEEEEECSSCS----------TTCEEEEEEEETTCSSCEEEEE-------------------C
T ss_pred cCCCcEEEEEECC-CCCEEEEECCCCCC----------CceEEEEEEeecCCcccEEEec-------------------c
Confidence 3568888887654 36899999985321 1123468887765543332210 0
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCC------CC---CccceeEEEc
Q 008312 163 IIHHVRLTGLKPDTLYHYQCGDPS------IP---AMSGTYCFRT 198 (570)
Q Consensus 163 ~~h~v~ltgL~P~T~Y~Yrvg~~~------~~---~~S~~~~F~T 198 (570)
......|.+|+|++.|..||.... .+ .||+...|.|
T Consensus 149 ~~~~~~l~~l~p~~~Y~vqVR~~~~~~~~~~g~WSeWS~~~~~~t 193 (199)
T 2b5i_C 149 YRHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGS 193 (199)
T ss_dssp SSCEEEECSCCTTSCEEEEEEEECCSSSCCCCCCCCCCCCEEC--
T ss_pred CceEEEecCCCCCcEEEEEEEEeccCCcCcCCeECCCCCCEEecC
Confidence 113557799999999999986443 12 5666666665
No 185
>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1
Probab=80.65 E-value=5.8 Score=38.30 Aligned_cols=89 Identities=12% Similarity=0.214 Sum_probs=52.0
Q ss_pred CCCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccC
Q 008312 83 GFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (570)
Q Consensus 83 ~~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 162 (570)
...|..++++... ...+.|+|....+. ..-.=.|+|....+..+..+.. .
T Consensus 137 P~PP~nl~v~~~~-~~~l~l~W~~P~~~----------~~L~Yevry~~~~~~~W~~~~~-------------------~ 186 (247)
T 2erj_C 137 PWAPENLTLHKLS-ESQLELNWNNRFLN----------HCLEHLVQYRTDWDHSWTEQSV-------------------D 186 (247)
T ss_dssp CCCCEEEEEEESS-SSCEEEEEECSSCC----------TTEEEEEEEECSSCSSCEEEEE-------------------C
T ss_pred eCCCCeEEEEECC-CCcEEEEECCCCCC----------CcEEEEEEEeeCCCCCCEEEec-------------------C
Confidence 3457777776553 36889999874310 0112357787655543332210 0
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCC------C---CCccceeEEEcCCC
Q 008312 163 IIHHVRLTGLKPDTLYHYQCGDPS------I---PAMSGTYCFRTMPD 201 (570)
Q Consensus 163 ~~h~v~ltgL~P~T~Y~Yrvg~~~------~---~~~S~~~~F~T~p~ 201 (570)
......|.+|+|++.|..||.... . +.||+...|.|.+.
T Consensus 187 ~~~~~~l~~L~p~~~Y~vqVR~k~~~~~~~~g~WSeWS~~~~~~t~~~ 234 (247)
T 2erj_C 187 YRHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSNTS 234 (247)
T ss_dssp SSCEEEESCCCTTSCEEEEEEEEECSSSCCCCCCCCCCCCEEECC---
T ss_pred CceEEEecCCCCCCEEEEEEEEEeCCCCCCCCccCCCCcCEEEECCCC
Confidence 112557799999999999985332 1 26777888887544
No 186
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=79.20 E-value=4.2 Score=36.99 Aligned_cols=28 Identities=18% Similarity=0.132 Sum_probs=20.9
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCccc
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPSIPAMSG 192 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~~~~~S~ 192 (570)
..+.|+||+|+|.|.++|..-+..+.+.
T Consensus 165 ~~~~i~~L~p~t~Y~~~V~A~~~~G~~~ 192 (201)
T 2ha1_A 165 TSVNIPDLLPGRKYIVNVYQISEDGEQS 192 (201)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTSCEE
T ss_pred eEEEeCCCCCCCEEEEEEEEEcCCCCcc
Confidence 4678999999999999987554334443
No 187
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=77.97 E-value=20 Score=34.16 Aligned_cols=22 Identities=9% Similarity=-0.058 Sum_probs=17.8
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPS 186 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~ 186 (570)
..+.+++|+|+|.|.+||..-+
T Consensus 157 ~~~~~~~L~p~t~Y~~~V~A~n 178 (290)
T 3l5i_A 157 RTYLRGNLAESKCYLITVTPVY 178 (290)
T ss_dssp EEECCSCCCTTCEEEEEEEEEE
T ss_pred ceEEecCcCCccEEEEEEEEEe
Confidence 4567899999999999986443
No 188
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=77.33 E-value=17 Score=36.18 Aligned_cols=37 Identities=27% Similarity=0.342 Sum_probs=27.9
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPD 201 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~ 201 (570)
....|++|+|++.|.|||...+. ..+|....|+|.+.
T Consensus 252 ~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~ 291 (389)
T 2jll_A 252 TMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPV 291 (389)
T ss_dssp SEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred ceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCC
Confidence 45678999999999999964432 24567788888765
No 189
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=76.95 E-value=1.4 Score=47.70 Aligned_cols=97 Identities=15% Similarity=0.098 Sum_probs=54.2
Q ss_pred CCCCceEEEee-cCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCcccccc
Q 008312 83 GFEPEQISVSL-SSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTS 161 (570)
Q Consensus 83 ~~~P~qi~lt~-~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~ 161 (570)
+..|..+.+.. ...++++.|+|.......|. ...=.|+|....+..+..+. ... ..
T Consensus 199 p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~--------~~~Y~v~~~~~~~~~w~~~~-----------~~~----~~ 255 (589)
T 3l5h_A 199 PNPPHNLSVINSEELSSILKLTWTNPSIKSVI--------ILKYNIQYRTKDASTWSQIP-----------PED----TA 255 (589)
T ss_dssp CCCCCSCEEECTTTCTTCEEEECCCCGGGGTS--------CEEEEEEEEETTCSCCBCCC-----------TTS----SC
T ss_pred cCCCceEEEEecCCCCCeEEEEeCCCCCCCee--------eEEEEEEECCCCCCCcEEEc-----------ccc----Cc
Confidence 44678887753 33568999999864421110 01234555554322111100 000 01
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecCC---C---CCccceeEEEcCCCC
Q 008312 162 GIIHHVRLTGLKPDTLYHYQCGDPS---I---PAMSGTYCFRTMPDS 202 (570)
Q Consensus 162 ~~~h~v~ltgL~P~T~Y~Yrvg~~~---~---~~~S~~~~F~T~p~~ 202 (570)
.....+.|++|+|+|.|.+||...+ . +.||+...|+|.+..
T Consensus 256 ~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~~ 302 (589)
T 3l5h_A 256 STRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDR 302 (589)
T ss_dssp SCCSEEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCCC
T ss_pred CceeEEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCccC
Confidence 2234668899999999999985432 1 245778888887643
No 190
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=76.55 E-value=9 Score=42.68 Aligned_cols=98 Identities=16% Similarity=0.058 Sum_probs=54.1
Q ss_pred CCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008312 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (570)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 163 (570)
..|..+.+.-. .++++.|+|.-.....+.. ....-.|+|....+........ .... ..+.
T Consensus 361 ~~P~~~~~~~~-~~~sv~l~W~~p~~~~~~~------~~~~y~v~y~~~~~~~~~~~~~----~~~~---------~~~~ 420 (731)
T 2v5y_A 361 RGPRKLEVVEV-KSRQITIRWEPFGYNVTRC------HSYNLTVHYCYQVGGQEQVREE----VSWD---------TENS 420 (731)
T ss_dssp CCCEEEEEEEE-CSSCEEEEEECCCHHHHCS------SSCEEEEEEEEESSSSEEEEEE----EECC---------SSCS
T ss_pred CCCceeEEEec-cCCeEEEEEECCCcccccc------eeeeEEEEEEEccCCCCcccee----EEEE---------ecCC
Confidence 45777766543 3689999998643211100 0012356776554322111100 0000 0112
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCC--CccceeEEEcCCC
Q 008312 164 IHHVRLTGLKPDTLYHYQCGDPSIP--AMSGTYCFRTMPD 201 (570)
Q Consensus 164 ~h~v~ltgL~P~T~Y~Yrvg~~~~~--~~S~~~~F~T~p~ 201 (570)
...+.|++|+|+|.|.+||..-+.. ..|....++|...
T Consensus 421 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~S~~~~~~T~~~ 460 (731)
T 2v5y_A 421 HPQHTITNLSPYTNVSVKLILMNPEGRKESQELIVQTDED 460 (731)
T ss_dssp SCEEEECSCCSSCEEEEEEEEECSSCEEECCCEEEECCCC
T ss_pred cceEEECCCCCCCEEEEEEEEEcCCCCCCCceEEEEccCC
Confidence 3456899999999999998654322 3477888888654
No 191
>1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B*
Probab=76.21 E-value=9.6 Score=35.38 Aligned_cols=99 Identities=11% Similarity=0.090 Sum_probs=47.9
Q ss_pred CCCCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCcccccc
Q 008312 82 EGFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTS 161 (570)
Q Consensus 82 ~~~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~ 161 (570)
....|..+.+.... .+.+.|+|...... .. .. ...-.=.|+|....+.-... . .... ..
T Consensus 97 kp~PP~nl~~~~~~-~~~l~l~W~~p~~~-~~-~~---~~~L~yev~y~~~~~~~~~~-~-----~~~~---------~~ 155 (207)
T 1iar_B 97 KPRAPGNLTVHTNV-SDTLLLTWSNPYPP-DN-YL---YNHLTYAVNIWSENDPADFR-I-----YNVT---------YL 155 (207)
T ss_dssp CCCCCEEEEEC-----CCEEEEEECSSCT-TS-TT---GGGCEEEEEEEESSSCSCEE-E-----EEEC---------SS
T ss_pred ccCCCCCeEEEEcc-CCCEEEEECCCCCc-cc-cc---cccEEEEEEEccCCCchhhe-e-----eeee---------cC
Confidence 34568888887533 35899999875321 00 00 00123467777654432111 1 0000 01
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecCC------CCCccceeEEEcCCC
Q 008312 162 GIIHHVRLTGLKPDTLYHYQCGDPS------IPAMSGTYCFRTMPD 201 (570)
Q Consensus 162 ~~~h~v~ltgL~P~T~Y~Yrvg~~~------~~~~S~~~~F~T~p~ 201 (570)
+....+.+.+|.|+++|..||.... -+.||+...|+|.++
T Consensus 156 ~~~~~~~~~~L~p~~~Y~vqVR~k~~~~~G~WSeWS~~~~~~t~~~ 201 (207)
T 1iar_B 156 EPSLRIAASTLKSGISYRARVRAWAQAYNTTWSEWSPSTKWHNSYR 201 (207)
T ss_dssp CCEEEECC-----CCCEEEEEEEECGGGTCCCCCCCCCEEEC----
T ss_pred CcEEEEEHHHCCCCCEEEEEEEEecCCCCCCCCCCCcCeEEECCCC
Confidence 2345566779999999999986442 126778899998754
No 192
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=76.14 E-value=7.1 Score=38.44 Aligned_cols=102 Identities=13% Similarity=0.127 Sum_probs=51.7
Q ss_pred CCCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccC
Q 008312 83 GFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (570)
Q Consensus 83 ~~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 162 (570)
+..|..+++... .+++.|+|.......+ ....=.|+|....+..+....-....... ....+ ...
T Consensus 200 P~pP~~l~~~~~--~~~l~lsW~~P~~~~~--------~~l~Yev~y~~~~~~~w~~~~~~~~~c~~-~~~~~----~~~ 264 (314)
T 3bpo_C 200 PDPPHIKNLSFH--NDDLYVQWENPQNFIS--------RCLFYEVEVNNSQTETHNVFYVQEAKCEN-PEFER----NVE 264 (314)
T ss_dssp CCCCEEEEEEEE--TTEEEEEEECCTTCCG--------GGEEEEEEEEC--CCCEEEEEESCCCCCC-TTSSC----CCS
T ss_pred eCCCCEEEEEEc--CCcEEEEEeCCCccCC--------ceEEEEEEEEECCCCcceEEecccccccc-ccccc----ccC
Confidence 346888888743 4799999987532100 00123567765543322110000000000 00000 012
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCC-------C---CCccceeEEEcC
Q 008312 163 IIHHVRLTGLKPDTLYHYQCGDPS-------I---PAMSGTYCFRTM 199 (570)
Q Consensus 163 ~~h~v~ltgL~P~T~Y~Yrvg~~~-------~---~~~S~~~~F~T~ 199 (570)
....+.|.+|+|+|+|.+||.... . +.||+...|.+.
T Consensus 265 ~~~~~~l~~L~p~t~Y~~qVra~~~~~~~~~~g~WS~WS~~~~~~~~ 311 (314)
T 3bpo_C 265 NTSCFMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIGKK 311 (314)
T ss_dssp SEEEEEEESCCTTSCEEEEEEEEECTTTSCCCCCCCCCCCCEEESCC
T ss_pred CceEEEEccCCCCCEEEEEEEeeecccccCCCCeeCCCCCCeEeccc
Confidence 346778999999999999985332 1 256667777554
No 193
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=75.06 E-value=14 Score=41.03 Aligned_cols=39 Identities=21% Similarity=0.204 Sum_probs=28.2
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC--CCccceeEEEcCCCC
Q 008312 164 IHHVRLTGLKPDTLYHYQCGDPSI--PAMSGTYCFRTMPDS 202 (570)
Q Consensus 164 ~h~v~ltgL~P~T~Y~Yrvg~~~~--~~~S~~~~F~T~p~~ 202 (570)
...++|+||+|+|.|.++|..-+. .+-+....|+|.+..
T Consensus 593 ~~~~~l~~L~p~t~Y~~~V~A~n~~G~G~~~~~~~~T~~~~ 633 (680)
T 1zlg_A 593 HYVLTVPNLRPSTLYRLEVQVLTPGGEGPATIKTFRTPELP 633 (680)
T ss_pred ccEEEecCCCCCceEEEEEEEEcCCCcCCCcceEEECCCCC
Confidence 567899999999999999864321 122367788887543
No 194
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=74.45 E-value=29 Score=34.12 Aligned_cols=36 Identities=22% Similarity=0.373 Sum_probs=27.7
Q ss_pred EEEeCCCCCCCEEEEEEecCC-----CCCccceeEEEcCCC
Q 008312 166 HVRLTGLKPDTLYHYQCGDPS-----IPAMSGTYCFRTMPD 201 (570)
Q Consensus 166 ~v~ltgL~P~T~Y~Yrvg~~~-----~~~~S~~~~F~T~p~ 201 (570)
.++|++|+|+|.|..+|..-. .+.+|+...++|...
T Consensus 160 ~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~~ 200 (306)
T 3s98_A 160 RHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVE 200 (306)
T ss_dssp EEEECSCCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCSC
T ss_pred eEEEccCCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecCC
Confidence 578999999999999985332 246788888888643
No 195
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=73.08 E-value=2.8 Score=39.78 Aligned_cols=36 Identities=19% Similarity=0.343 Sum_probs=25.1
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC---CccceeEEEcCCC
Q 008312 166 HVRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTMPD 201 (570)
Q Consensus 166 ~v~ltgL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~ 201 (570)
..++++|+|+|.|.|||...+.. .+|....++|.+.
T Consensus 47 ~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~~ 85 (232)
T 4go6_B 47 QLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLP 85 (232)
T ss_dssp --CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCCT
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecCC
Confidence 45678999999999998654422 4566777777543
No 196
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=72.79 E-value=31 Score=35.38 Aligned_cols=113 Identities=16% Similarity=0.182 Sum_probs=58.4
Q ss_pred CCCCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCcccccc
Q 008312 82 EGFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTS 161 (570)
Q Consensus 82 ~~~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~ 161 (570)
....|..|.++..+ +.+.|+|......... ..+.-....=.|+|.... ..+..+... .. .
T Consensus 108 ~p~pP~~l~v~~~~--~~~~l~W~~p~~~~~~--~~~~~~~l~Y~v~yr~~~-~~w~~~~~~----~~-----------~ 167 (419)
T 2gys_A 108 QPPEPRDLQISTDQ--DHFLLTWSVALGSPQS--HWLSPGDLEFEVVYKRLQ-DSWEDAAIL----LS-----------N 167 (419)
T ss_dssp CCCCCEEEEEEEET--TEEEEEEECCC-------CCSCGGGEEEEEEEEETT-SCSTTCEEE----EE-----------S
T ss_pred cCCCCCceEEEecC--CeEEEEECCCcccccc--chhccCceEEEEEEccCC-CChhheeee----cc-----------c
Confidence 34568999888765 5999999875431000 000000012345665543 111111100 00 0
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecCCC---------CCccceeEEEcCCCCCCCCCCeEEEEEec
Q 008312 162 GIIHHVRLTGLKPDTLYHYQCGDPSI---------PAMSGTYCFRTMPDSSSTSYPSRIAIVGD 216 (570)
Q Consensus 162 ~~~h~v~ltgL~P~T~Y~Yrvg~~~~---------~~~S~~~~F~T~p~~~~~~~~~rf~vigD 216 (570)
...+.+.+.+|.|++.|..||..... +.||+...|+|.+... ..+..+-.+.+
T Consensus 168 ~~~~~~~~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~~--~~p~~l~c~~~ 229 (419)
T 2gys_A 168 TSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGDE--AQPQNLECFFD 229 (419)
T ss_dssp SSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCCT--TSCEEEEEEEC
T ss_pred ceEEEechhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeecccccc--CCCceEEEEEC
Confidence 12223334499999999999853321 2567889999987652 22445544443
No 197
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=71.21 E-value=30 Score=35.40 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=26.7
Q ss_pred EEEeCCCCCCCEEEEEEecCC-----CCCccceeEEEcCC
Q 008312 166 HVRLTGLKPDTLYHYQCGDPS-----IPAMSGTYCFRTMP 200 (570)
Q Consensus 166 ~v~ltgL~P~T~Y~Yrvg~~~-----~~~~S~~~~F~T~p 200 (570)
.++|++|+|+|.|..||..-+ .+.+|+...++|..
T Consensus 164 ~~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~ 203 (414)
T 3se4_A 164 RHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTV 203 (414)
T ss_dssp EEEECCCCTTCEEEEEEEEECTTTCCEEEECCCEEEECCS
T ss_pred EEEEcCCCCCCeEEEEEEEEeccCCCCCccCccccccccc
Confidence 467999999999999987533 12567777788864
No 198
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=64.83 E-value=12 Score=39.86 Aligned_cols=92 Identities=7% Similarity=0.167 Sum_probs=52.2
Q ss_pred CCeEEEEEecCCCCCCh------HHHHHHHHhC-CCCEEEEcCCcccccccc-cCCCCCCcccccCCC-CCcccchHHHH
Q 008312 207 YPSRIAIVGDVGLTYNT------TSTVSHMISN-RPDLILLVGDVTYANLYL-TNGTGSDCYACSFAN-SPIHETYQPRW 277 (570)
Q Consensus 207 ~~~rf~vigD~g~~~~~------~~~i~~l~~~-~pDfvl~~GDl~Y~d~~~-~~G~~~~c~~~~~~~-~~~~e~Y~~~w 277 (570)
.++++++.+....+.+. ...++.+.+. +||.+|++|.+++..-.. ..|. + -.+++ .+..++|+..+
T Consensus 146 ~~l~ivvAsGPyT~sdnl~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~---~--p~~~~~~~~~~t~~~lF 220 (460)
T 3flo_A 146 SSLKVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGK---L--PNFPQFKTQPKTLDELF 220 (460)
T ss_dssp SCEEEEEEESCCSCSSCCCCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTC---C--CCCTTCSSCCSSHHHHH
T ss_pred CCcEEEEEeCCccCCCccChHHHHHHHHHHHhccCCCEEEEecCcccccCcccccCc---c--cccccccccccCHHHHH
Confidence 47899999887665432 2344444444 799999999999754110 0121 0 00111 11134454433
Q ss_pred HHH-HHhhhhhhccCCeEEeccCcccc
Q 008312 278 DYW-GRYMQPVLSKVPIMVVEGNHEYE 303 (570)
Q Consensus 278 d~~-~~~l~~l~~~iP~~~v~GNHD~~ 303 (570)
... ...++.+...+-++.|||+||..
T Consensus 221 ~~~i~~il~~l~~~t~VVlVPS~rD~~ 247 (460)
T 3flo_A 221 LKLFTPILKTISPHIQTVLIPSTKDAI 247 (460)
T ss_dssp HHHTHHHHTTSCTTSEEEEECCTTBTT
T ss_pred HHHHHHHHHhccCCCEEEEeCCccccc
Confidence 332 22344455567799999999985
No 199
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=62.43 E-value=16 Score=34.91 Aligned_cols=21 Identities=14% Similarity=0.194 Sum_probs=17.8
Q ss_pred EEEeCCCCCCCEEEEEEecCC
Q 008312 166 HVRLTGLKPDTLYHYQCGDPS 186 (570)
Q Consensus 166 ~v~ltgL~P~T~Y~Yrvg~~~ 186 (570)
...|++|+|++.|.|||...+
T Consensus 255 ~~~i~~l~~~~~y~~~~~A~N 275 (305)
T 2nzi_A 255 RYTVINLFGKTSYQFRVIAEN 275 (305)
T ss_dssp EEEECSCCSSCEEEEEEEEEE
T ss_pred eEEecCCCCCCeEEEEEEEEe
Confidence 467899999999999997554
No 200
>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=59.48 E-value=10 Score=35.76 Aligned_cols=38 Identities=34% Similarity=0.443 Sum_probs=29.5
Q ss_pred EEEEeCCCCCCCEEEEEEecC-----CCCCccceeEEEcCCCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDP-----SIPAMSGTYCFRTMPDS 202 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~-----~~~~~S~~~~F~T~p~~ 202 (570)
+.++|.+|+|+|.|..+|... ..+.+|+...|+|.+..
T Consensus 173 ~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~d~ 215 (221)
T 4doh_R 173 HTLVLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCARTLKDQ 215 (221)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEEEECCCC-
T ss_pred cEEEEecCCCCCcEEEEEEEEEcCCCCCCCCCCCEeEecCCCc
Confidence 367899999999999998532 23478899999997653
No 201
>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}
Probab=56.80 E-value=8.9 Score=35.41 Aligned_cols=36 Identities=28% Similarity=0.205 Sum_probs=28.4
Q ss_pred EEEeCCCCCCCEEEEEEecCC-----CCCccceeEEEcCCC
Q 008312 166 HVRLTGLKPDTLYHYQCGDPS-----IPAMSGTYCFRTMPD 201 (570)
Q Consensus 166 ~v~ltgL~P~T~Y~Yrvg~~~-----~~~~S~~~~F~T~p~ 201 (570)
.++|++|+|+|.|..+|..-. .+.+|+...|+|.+.
T Consensus 156 ~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~~ 196 (201)
T 3lqm_A 156 FEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTHD 196 (201)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTTTEECCCCCCEEEECCCG
T ss_pred eEEEecCCCCCcEEEEEEEEeccCCCCCCcCCCEeEEeCCC
Confidence 478999999999999985332 247888899998764
No 202
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=52.93 E-value=22 Score=32.20 Aligned_cols=34 Identities=6% Similarity=-0.191 Sum_probs=23.1
Q ss_pred EEEEeCCC-CCCCEEEEEEecCCCCCc--cceeEEEc
Q 008312 165 HHVRLTGL-KPDTLYHYQCGDPSIPAM--SGTYCFRT 198 (570)
Q Consensus 165 h~v~ltgL-~P~T~Y~Yrvg~~~~~~~--S~~~~F~T 198 (570)
..+.|++| +|+|.|.+||...+..+. |....|.+
T Consensus 62 ~~~~i~~L~~~~t~Y~~~V~A~n~~G~~~s~~~~~~~ 98 (215)
T 1bqu_A 62 TSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDP 98 (215)
T ss_dssp TEEECSSCCCTTSCEEEEEEEEETTEEEECCCEEECG
T ss_pred ceEEEcCCccccccEEEEEEEEecccCccCCcEEecc
Confidence 46789999 999999999865542222 33455544
No 203
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=52.53 E-value=3.4 Score=42.59 Aligned_cols=35 Identities=6% Similarity=-0.022 Sum_probs=9.3
Q ss_pred EEeCC-CCCCCEEEEEEecC------CC---CCccceeEEEcCCC
Q 008312 167 VRLTG-LKPDTLYHYQCGDP------SI---PAMSGTYCFRTMPD 201 (570)
Q Consensus 167 v~ltg-L~P~T~Y~Yrvg~~------~~---~~~S~~~~F~T~p~ 201 (570)
+.|.+ |+|+|.|.+||... .. +.||+...|+|...
T Consensus 292 ~~l~~~L~p~t~Y~~qVRa~~~~~~~~~g~WSeWS~~~~~~t~~~ 336 (380)
T 3lb6_C 292 TYTLKTTNETRQLCFVVRSKVNIYCSDDGIWSEWSDKQCWEGEDL 336 (380)
T ss_dssp CC------------CCEEEEECTTTCSSCCCCCCCCC--------
T ss_pred EEEeCccCCCcEEEEEEEEEEcccCCCCCCCCCCCCCEEEeCCCC
Confidence 45788 99999999987533 11 36688888988644
No 204
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=51.91 E-value=80 Score=34.83 Aligned_cols=37 Identities=19% Similarity=0.088 Sum_probs=27.0
Q ss_pred EEEEeCCCCCCCEEEEEEecC--CC---CCccceeEEEcCCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDP--SI---PAMSGTYCFRTMPD 201 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~--~~---~~~S~~~~F~T~p~ 201 (570)
...+|++|+|++.|.|||... +. +.+|....++|.+.
T Consensus 316 ~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~ 357 (731)
T 2v5y_A 316 TSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCA 357 (731)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEECCCC
T ss_pred ceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEeeecCC
Confidence 356889999999999998643 21 24566778888654
No 205
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=50.17 E-value=7.5 Score=44.87 Aligned_cols=38 Identities=24% Similarity=0.127 Sum_probs=29.3
Q ss_pred EEEEeCCCCCCCEEEEEEec-CC---C----CCccceeEEEcCCCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGD-PS---I----PAMSGTYCFRTMPDS 202 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~-~~---~----~~~S~~~~F~T~p~~ 202 (570)
..+.|++|+|+|.|.|||.. -+ . +.+|+...|+|.+.+
T Consensus 549 ~~~~l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~~ 594 (897)
T 2dtg_E 549 PGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATN 594 (897)
T ss_dssp CEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCCC
T ss_pred cceEeCCCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCCCC
Confidence 45789999999999999976 22 1 357888889997643
No 206
>1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=45.86 E-value=6.7 Score=31.28 Aligned_cols=36 Identities=22% Similarity=0.292 Sum_probs=23.7
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCcc--ceeEEEcC
Q 008312 164 IHHVRLTGLKPDTLYHYQCGDPSIPAMS--GTYCFRTM 199 (570)
Q Consensus 164 ~h~v~ltgL~P~T~Y~Yrvg~~~~~~~S--~~~~F~T~ 199 (570)
.+.-+|.||+||++|.=|+-+--..+-+ ..+.|+|.
T Consensus 37 ~nSYtIsGLkPGvtYegQLisV~r~g~~EvtrfdfTT~ 74 (89)
T 1q38_A 37 LNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTT 74 (89)
T ss_dssp SSCCCCCCCCTTCCEEEEEEEECTTSCCCEEEEEECSS
T ss_pred cceEEEeccCCCcEEEEEEEeeeecccCCceEEEEEec
Confidence 3444789999999999987543322334 45666664
No 207
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=45.46 E-value=7.5 Score=40.17 Aligned_cols=34 Identities=24% Similarity=0.293 Sum_probs=24.6
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC-----C---CccceeEEEc
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPSI-----P---AMSGTYCFRT 198 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~~-----~---~~S~~~~F~T 198 (570)
..+.|.+|+|+|.|.+||..... + .||+...|+|
T Consensus 377 ~~~~l~~L~p~t~Y~~qVRa~~~~g~~~G~wS~WS~~~~~~t 418 (419)
T 2gys_A 377 HSMALPALEPSTRYWARVRVRTSRTGYNGIWSEWSEARSWDT 418 (419)
T ss_dssp SEEECCCCCSSCCCEEEEEEEECCTTCCBCCCCCCCCEECCC
T ss_pred cEEEeccCCCCCeEEEEEEEEEcCCCCCCccCCCCCCeEeeC
Confidence 36789999999999999854321 1 5666777765
No 208
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=43.89 E-value=69 Score=29.82 Aligned_cols=32 Identities=0% Similarity=-0.027 Sum_probs=20.8
Q ss_pred eCCCCCCCEEEEEEecCCCC---CccceeEEEcCC
Q 008312 169 LTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTMP 200 (570)
Q Consensus 169 ltgL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p 200 (570)
+++|+|++.|.|||...+.. .+|++..+.+.+
T Consensus 167 ~~~L~~~t~Y~frV~A~N~~G~Gp~S~v~t~~~~~ 201 (232)
T 4go6_B 167 HIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETS 201 (232)
T ss_dssp CBEESSSEEEEEEEEEECSSCBCCCEEEEEECC--
T ss_pred eecCccCCceEEEEEEECCCcCCCCcccEEeccCC
Confidence 56899999999998655433 355555555443
No 209
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=43.13 E-value=26 Score=35.32 Aligned_cols=16 Identities=13% Similarity=0.084 Sum_probs=13.8
Q ss_pred CCCCCCCEEEEEEecC
Q 008312 170 TGLKPDTLYHYQCGDP 185 (570)
Q Consensus 170 tgL~P~T~Y~Yrvg~~ 185 (570)
++|.+||+|||.|...
T Consensus 76 t~~~~GttYyYwVk~~ 91 (344)
T 3b4n_A 76 ADTNSGLNYWYWVDVV 91 (344)
T ss_dssp CCCCTTCCCEEEEEEE
T ss_pred cCcCCCcEEEEEEEEe
Confidence 7999999999998644
No 210
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=41.86 E-value=2.4e+02 Score=28.39 Aligned_cols=25 Identities=8% Similarity=0.238 Sum_probs=19.2
Q ss_pred CCCceEEEeecCCCCceEEEEEeCc
Q 008312 84 FEPEQISVSLSSAHDSVWISWITGE 108 (570)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~I~W~T~~ 108 (570)
..|..+.++-.+..+++.|+|.-..
T Consensus 33 ~pP~nl~v~~~~~~~~v~LsW~p~~ 57 (380)
T 3lb6_C 33 NPPQDFEIVDPGYLGYLYLQWQPPL 57 (380)
T ss_dssp CCCEEEEEECCSSSSEEEEEEECCC
T ss_pred CcCCceEEEecCcCceEEEEECCCC
Confidence 3588898876555689999998754
No 211
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=37.93 E-value=6.2 Score=42.38 Aligned_cols=35 Identities=23% Similarity=0.253 Sum_probs=26.2
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC--CCccceeEEEcC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPSI--PAMSGTYCFRTM 199 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~~--~~~S~~~~F~T~ 199 (570)
..++|+||+|+|.|.++|...+. +.+|+...|+|.
T Consensus 552 ~~~~~~~L~p~t~Y~~~V~A~n~~G~~~S~~~~~~T~ 588 (589)
T 3l5h_A 552 TEYTLSSLTSDTLYMVRMAAYTDEGGKDGPEFTFTTP 588 (589)
T ss_dssp CBCCBCSCCSSCCEECCEEEEETTEEEECCCCEECCC
T ss_pred cEEEecCCCCCCEEEEEEEEEeCCCCCCCCCeEEecC
Confidence 34678999999999999854332 357778888874
No 212
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=36.25 E-value=53 Score=31.61 Aligned_cols=22 Identities=0% Similarity=-0.331 Sum_probs=18.6
Q ss_pred EEEEeCCC-CCCCEEEEEEecCC
Q 008312 165 HHVRLTGL-KPDTLYHYQCGDPS 186 (570)
Q Consensus 165 h~v~ltgL-~P~T~Y~Yrvg~~~ 186 (570)
..+.|++| +|++.|.+||...+
T Consensus 158 ~~~~i~~L~~p~t~Y~f~V~A~N 180 (303)
T 1i1r_A 158 TSCTVDYSTVYFVNIEVWVEAEN 180 (303)
T ss_dssp TEEECSSCCCTTSCEEEEEEEEE
T ss_pred eEEEECCcCcccccEEEEEEEEc
Confidence 46789999 99999999987554
No 213
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=34.28 E-value=32 Score=39.58 Aligned_cols=37 Identities=22% Similarity=0.292 Sum_probs=26.7
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCC------ccceeEEEcCCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPSIPA------MSGTYCFRTMPD 201 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~~~~------~S~~~~F~T~p~ 201 (570)
..++|+||+|+|.|.++|..-+..+ .+....++|.+.
T Consensus 747 t~~~i~gL~p~t~Y~~~V~A~n~~G~g~~~s~s~~v~~~T~~~ 789 (897)
T 2dtg_E 747 ESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMPE 789 (897)
T ss_dssp SEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCCC
T ss_pred eEEEECCCCCCcEEEEEEEEEeCCCCCCCCCCCceeEEeccCc
Confidence 4678999999999999985433222 245678888763
No 214
>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=32.96 E-value=20 Score=33.32 Aligned_cols=35 Identities=23% Similarity=0.311 Sum_probs=25.3
Q ss_pred EEEeCCCCCCCEEEEEEecCC-----CCCccceeEEEcCC
Q 008312 166 HVRLTGLKPDTLYHYQCGDPS-----IPAMSGTYCFRTMP 200 (570)
Q Consensus 166 ~v~ltgL~P~T~Y~Yrvg~~~-----~~~~S~~~~F~T~p 200 (570)
.++|.+|+|+|.|..+|..-. .+.+|+..-|.|..
T Consensus 161 ~~~i~~L~p~t~Ycv~Vra~~~~~~~~g~~S~~~C~~t~~ 200 (206)
T 4doh_B 161 PVHLETMEPGAAYCVKAQTFVKAIGRYSAFSQTECVEVQG 200 (206)
T ss_dssp EEEEEECCSSSCEEEEEEEEEGGGTEECCCCCCEEECC--
T ss_pred EEEEeCCCCCCcEEEEEEEEecCCCCCCCCCCCEeEEccc
Confidence 578999999999999986321 23677777887753
No 215
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=32.09 E-value=45 Score=36.67 Aligned_cols=38 Identities=24% Similarity=0.428 Sum_probs=26.5
Q ss_pred EEEEEeCCCCCCCEEEEEEec----CCCCCccceeEEEcCCC
Q 008312 164 IHHVRLTGLKPDTLYHYQCGD----PSIPAMSGTYCFRTMPD 201 (570)
Q Consensus 164 ~h~v~ltgL~P~T~Y~Yrvg~----~~~~~~S~~~~F~T~p~ 201 (570)
.|+..+++|+|+|+|.|+|.. +.....++....+|.+.
T Consensus 112 ~~~~~v~~L~p~T~Y~~~v~a~d~~G~~s~ds~~V~~~T~~~ 153 (608)
T 2uvf_A 112 MQNFTVIGLKPETSYQFTVKAQYADGSLSVASKPITAKTSAK 153 (608)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEETTSCBCCCCCCEEEECCCC
T ss_pred eeeEEecCCCCCCEEEEEEEEecCCCcccccchhcccccccC
Confidence 467889999999999999865 21113455666666553
No 216
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=29.05 E-value=1.6e+02 Score=26.29 Aligned_cols=96 Identities=10% Similarity=0.075 Sum_probs=48.9
Q ss_pred CCCceEEEeecCCCCceEEEEEeCcccccCCCCCCCCCCCccEEEEccCCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008312 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (570)
Q Consensus 84 ~~P~qi~lt~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 163 (570)
..|..+......+.++|.++|..+... |. ...=.|+|......-... ...... .+.. ....
T Consensus 6 ~~P~~l~c~~~~~~~~~~~~W~p~~~~-~~--------~~~Y~l~~~~~~~~~~~~--~~~~~~---~~~~-----~~~~ 66 (215)
T 1cd9_B 6 ASPSNLSCLMHLTTNSLVCQWEPGPET-HL--------PTSFILKSFRSRADCQYQ--GDTIPD---CVAK-----KRQN 66 (215)
T ss_dssp CCCEEEEEEEETTTTEEEEEEECCSCC-SS--------CCEEEEEEEECCGGGCSC--CCEEEE---EECC-----TTCC
T ss_pred CCCeeeeeecCCCcccEEEEecCCCCC-CC--------ceeEEEEEEecCCccccc--cccccc---CCCC-----CCCc
Confidence 357777765554568999999975321 10 012345565432110000 000000 0000 0113
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCC--CccceeEEEc
Q 008312 164 IHHVRLTGLKPDTLYHYQCGDPSIP--AMSGTYCFRT 198 (570)
Q Consensus 164 ~h~v~ltgL~P~T~Y~Yrvg~~~~~--~~S~~~~F~T 198 (570)
..++.+++|.|.+.|.++|...+.- ..|....|.+
T Consensus 67 ~~~~~~~~L~~~~~Y~~~V~A~N~~G~~~s~~~~~~~ 103 (215)
T 1cd9_B 67 NCSIPRKNLLLYQYMAIWVQAENMLGSSESPKLCLDP 103 (215)
T ss_dssp EEEEEGGGCCTTSCEEEEEEEEETTEEEECCCEEECG
T ss_pred EEEECCcccccceEEEEEEEEECCCCCccCccEEEch
Confidence 4567889999999999998654321 2244555554
No 217
>2mcm_A Macromomycin; apoprotein; 1.50A {Streptomyces macromomyceticus} SCOP: b.1.7.1
Probab=28.30 E-value=45 Score=28.13 Aligned_cols=27 Identities=44% Similarity=0.712 Sum_probs=21.8
Q ss_pred ccCCccccccCeEEEEEeCCCCCCCEEEEE
Q 008312 152 PFLGLQNYTSGIIHHVRLTGLKPDTLYHYQ 181 (570)
Q Consensus 152 p~~g~~~~~~~~~h~v~ltgL~P~T~Y~Yr 181 (570)
|..|+ ..|..-+|..+||.|++.||--
T Consensus 8 PatgL---~DGq~VtV~~tGl~p~~~y~v~ 34 (112)
T 2mcm_A 8 PATGL---SNGQTVTVSATGLTPGTVYHVG 34 (112)
T ss_dssp SCSSB---CTTEEEEEEEESCCTTCEEEEE
T ss_pred CCCCC---CCCCEEEEEEEccCCCCeEEEE
Confidence 44555 3578899999999999999975
No 218
>1noa_A Neocarzinostatin; antibacterial protein; 1.50A {Streptomyces carzinostaticus} SCOP: b.1.7.1 PDB: 1nco_A 1o5p_A* 1j5h_A 1j5i_A* 2g0k_A 2g0l_A* 2cbq_A* 2cbo_A* 2cbm_A* 2cbt_A*
Probab=27.45 E-value=46 Score=28.15 Aligned_cols=27 Identities=33% Similarity=0.518 Sum_probs=21.8
Q ss_pred ccCCccccccCeEEEEEeCCCCCCCEEEEE
Q 008312 152 PFLGLQNYTSGIIHHVRLTGLKPDTLYHYQ 181 (570)
Q Consensus 152 p~~g~~~~~~~~~h~v~ltgL~P~T~Y~Yr 181 (570)
|..|+ ..|..-+|..+||.|++.||--
T Consensus 9 PatgL---~DGq~VtV~~tGl~p~~~y~v~ 35 (113)
T 1noa_A 9 PSSGL---SDGTVVKVAGAGLQAGTAYDVG 35 (113)
T ss_dssp SCSSC---CTTCEEEEEEESCCTTCEEEEE
T ss_pred CCCCC---CCCCEEEEEEEccCCCCeEEEE
Confidence 44555 3578899999999999999975
No 219
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=22.83 E-value=18 Score=37.19 Aligned_cols=37 Identities=27% Similarity=0.437 Sum_probs=0.0
Q ss_pred EEEEeCCCCCCCEEEEEEecCC-------CCCccceeEEEcCCC
Q 008312 165 HHVRLTGLKPDTLYHYQCGDPS-------IPAMSGTYCFRTMPD 201 (570)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~-------~~~~S~~~~F~T~p~ 201 (570)
..++|++|+|+|.|..+|..-. .+.+|+...|+|.+.
T Consensus 367 ~~~~l~~L~p~t~Y~~~V~A~~~~~~~~g~g~~S~~~~~~T~~~ 410 (414)
T 3se4_A 367 TDVTVPNLKPLTVYCVKARAHTMDEKLNKSSVFSDAVCEKTKPG 410 (414)
T ss_dssp --------------------------------------------
T ss_pred CeEEeCCCCCCCeEEEEEEEEecccccCCCCCCCCCEeEEeCCC
Confidence 4578999999999999986432 236777778888654
Done!