BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008313
(570 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 184 ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D N DG + +E ++ A G + + EEL K DKN DG + DE
Sbjct: 20 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 72
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 38.5 bits (88), Expect = 0.010, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 184 ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
I+ + D N DGQ++ EF+ ++A G ++ + E F D NG+G +S+DE
Sbjct: 107 IVGMCDKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVDTNGNGELSLDE 157
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 184 ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D N DG + +E ++ A G + + EEL K DKN DG + DE
Sbjct: 100 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 184 ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D N DG + +E ++ A G + + EEL K DKN DG + DE
Sbjct: 10 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 62
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 184 ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D N DG + +E ++ A G + + EEL K DKN DG + DE
Sbjct: 12 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 64
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 187 IVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
I D N DG + +E +++ A G V E+L K +DKN DG + DE
Sbjct: 104 IFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDE 153
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 187 IVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
I D N DG + +E +++ A G V E+L K +DKN DG + DE
Sbjct: 104 IFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDE 153
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 187 IVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
I D N DG + +E +++ A G V E+L K +DKN DG + DE
Sbjct: 104 IFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDE 153
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 187 IVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
I D N DG + +E +++ A G V E+L K +DKN DG + DE
Sbjct: 101 IFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDE 150
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 184 ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D N DG + +E ++ A G + + EEL K DKN DG + DE
Sbjct: 100 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 184 ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D N DG + +E ++ A G + + EEL K DKN DG + DE
Sbjct: 15 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 67
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 184 ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D N DG + +E ++ A G + + EEL K DKN DG + DE
Sbjct: 100 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 184 ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D N DG + E ++ A G + + EEL K DKN DG + DE
Sbjct: 11 LFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 63
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 184 ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D N DG + E ++ A G + + EEL K DKN DG + DE
Sbjct: 100 LFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 187 IVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
I D N DG + +E +++ A G V E+L K +DKN DG + DE
Sbjct: 18 IFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDE 67
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 184 ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ I D N DG + +E +++ A G V + E L K DKN DG + DE
Sbjct: 98 LFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDE 150
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 184 ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D N DG + E ++ A G + + EEL K DKN DG + DE
Sbjct: 100 LFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 187 IVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
I D N DG + +E +++ A G V E+L K +DKN DG + DE
Sbjct: 104 IFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDE 153
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 184 ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D N DG + E ++ A G + + EEL K DKN DG + DE
Sbjct: 100 LFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 187 IVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
I D N DG + +E +++ A G V + E L K DKN DG + DE
Sbjct: 101 IFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDE 150
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 189 DYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
D N DG + E ++ A G + + EEL K DKN DG + DE
Sbjct: 105 DKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Score = 29.3 bits (64), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 153 DPSSSNKIVGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQV 212
D S S K +GK+ + ++P E + ++ VD + G + F EF ++
Sbjct: 33 DGSISTKELGKV-MRMLGQNPTPEE---LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDD 88
Query: 213 AANKKEE----LFKAADKNGDGVVSVDE 236
+ K EE LF+ DKN DG + +DE
Sbjct: 89 SKGKSEEELSDLFRMWDKNADGYIDLDE 116
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 35.4 bits (80), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 179 SFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
S A+R+ D N+DG+LS EF ++ AF + F+ D +G+G ++ DE
Sbjct: 1 SSAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADE 58
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 15/83 (18%)
Query: 166 LSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISA----FGNQVAANKKE--- 218
LS + +E + S+A + D N DG ++F E ++++ G+ V N+ E
Sbjct: 89 LSTTSRGTLEEKLSWA---FELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATP 145
Query: 219 -----ELFKAADKNGDGVVSVDE 236
++FK DKN DG +++DE
Sbjct: 146 EMRVKKIFKLMDKNEDGYITLDE 168
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 173 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 232
P + + FA + ++ D + +G + F+EF ++S K F+ D N DG +
Sbjct: 57 PFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYI 116
Query: 233 SVDE 236
+ DE
Sbjct: 117 TFDE 120
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 35.4 bits (80), Expect = 0.094, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 189 DYNQDGQLSFKEFSDLISAF-GNQVAANKKEELFKAADKNGDGVVSVDE 236
D N DG++S E + + A G+QV EE+ + D NGDG V +E
Sbjct: 98 DTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 146
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 183 RILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKK-EELFKAADKNGDGVVSVDE 236
R + D N DG + F EF ++ G + + + EE K AD++G+GV+ + E
Sbjct: 12 RAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPE 66
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 132 VDLLEFLTKDSDADSEVFDLLDPSSSNKIVGKISLSCSVEDPIETEKSFARRILSIVDYN 191
D+ + K+ D + +L+D S K+ G+ +V D + E S IL D++
Sbjct: 349 TDIFRHIDKNGDGQLDRQELIDGYS--KLSGE---EVAVFDLPQIE-SEVDAILGAADFD 402
Query: 192 QDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
++G + + EF + + ++ +K E F+ D++G+G +SVDE
Sbjct: 403 RNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDE 447
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 7/57 (12%)
Query: 184 ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKE----ELFKAADKNGDGVVSVDE 236
+++ +D + + Q+ F EF L+S Q+ +N E E FK DKNGDG++S E
Sbjct: 52 LMNEIDVDGNHQIEFSEFLALMS---RQLKSNDSEQELLEAFKVFDKNGDGLISAAE 105
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 10/68 (14%)
Query: 173 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKE----ELFKAADKNG 228
P E E +++ +D + + Q+ F EF L+S Q+ +N E E FK DKNG
Sbjct: 43 PSEAE---VNDLMNEIDVDGNHQIEFSEFLALMS---RQLKSNDSEQELLEAFKVFDKNG 96
Query: 229 DGVVSVDE 236
DG++S E
Sbjct: 97 DGLISAAE 104
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 189 DYNQDGQLSFKEFSDLISAF-GNQVAANKKEELFKAADKNGDGVVSVDE 236
D N DG++S E + + G+QV EE+ + D NGDG V +E
Sbjct: 112 DTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 160
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 10/68 (14%)
Query: 173 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKE----ELFKAADKNG 228
P E E +++ +D + + Q+ F EF L+S Q+ +N E E FK DKNG
Sbjct: 43 PSEAE---VNDLMNEIDVDGNHQIEFSEFLALMS---RQLKSNDSEQELLEAFKVFDKNG 96
Query: 229 DGVVSVDE 236
DG++S E
Sbjct: 97 DGLISAAE 104
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 33.1 bits (74), Expect = 0.39, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 189 DYNQDGQLSFKEFSDLISAF-GNQVAANKKEELFKAADKNGDGVVSVDE 236
D N DG++S E + + G+QV EE+ + D NGDG V +E
Sbjct: 98 DTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 146
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 33.1 bits (74), Expect = 0.39, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 189 DYNQDGQLSFKEFSDLISAF-GNQVAANKKEELFKAADKNGDGVVSVDE 236
D N DG++S E + + G+QV EE+ + D NGDG V +E
Sbjct: 17 DTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 65
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 29/64 (45%)
Query: 173 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 232
P FA + ++ D N+DG++ F EF +S K FK D + DG +
Sbjct: 57 PFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYI 116
Query: 233 SVDE 236
+ +E
Sbjct: 117 TRNE 120
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 110 VARISVFETNRLSKSNLEGY-CEVDLLEFLTKDSDAD-SEVFDLLDPSSSNKIVGK---I 164
V RI + + N+ G+ E +L + LT++ A+ E F L D I K
Sbjct: 275 VNRIELKGIDFKEDGNILGHKLEYNLPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGT 334
Query: 165 SLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKK-EELFKA 223
+ ++P E E + +++ VD + DG + F EF +++ + ++ E F+
Sbjct: 335 VMRSLGQNPTEAE---LQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRV 391
Query: 224 ADKNGDGVVSVDE 236
DK+G+G +S E
Sbjct: 392 FDKDGNGYISAAE 404
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 110 VARISVFETNRLSKSNLEGY-CEVDLLEFLTKDSDAD-SEVFDLLDPSSSNKIVGK---I 164
V RI + + N+ G+ E +L + LT++ A+ E F L D I K
Sbjct: 275 VNRIELKGIDFKEDGNILGHKLEYNLPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGT 334
Query: 165 SLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKK-EELFKA 223
+ ++P E E + +++ VD + DG + F EF +++ + ++ E F+
Sbjct: 335 VMRSLGQNPTEAE---LQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRV 391
Query: 224 ADKNGDGVVSVDE 236
DK+G+G +S E
Sbjct: 392 FDKDGNGYISAAE 404
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 32/53 (60%)
Query: 184 ILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
IL D++++G + + EF + + ++ +K E F+ D++G+G +SVDE
Sbjct: 112 ILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDE 164
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 32.7 bits (73), Expect = 0.51, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 188 VDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+D ++DG +S EF + A G + +K F D N +G +S DE
Sbjct: 111 IDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDE 159
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 32/55 (58%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
R + D + +G +S E +++ G +++ + +E+ +AAD +GDG V+ +E
Sbjct: 86 REAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEE 140
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 173 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 232
P K++A+ + D N DG L FKE+ + K E F D +G+G +
Sbjct: 58 PEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTI 117
Query: 233 SVDE 236
S +E
Sbjct: 118 SKNE 121
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 173 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 232
P K++A+ + D N DG L FKE+ + K E F D +G+G +
Sbjct: 57 PEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTI 116
Query: 233 SVDE 236
S +E
Sbjct: 117 SKNE 120
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 173 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 232
P K++A+ + D N DG L FKE+ + K E F D +G+G +
Sbjct: 57 PEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTI 116
Query: 233 SVDE 236
S +E
Sbjct: 117 SKNE 120
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 173 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 232
P K++A+ + D N DG L FKE+ + K E F D +G+G +
Sbjct: 57 PEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTI 116
Query: 233 SVDE 236
S +E
Sbjct: 117 SKNE 120
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISAFGNQ---VAANKKEELFKAADKNGDGVVSVDE 236
+++ I+D ++DG + E ++ F + ++A + + L A DK+GDG + V+E
Sbjct: 44 KKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 101
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 12/67 (17%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEEL------------FKAADKNGD 229
R ++ D N+DG ++ +E D++ A + + A L F+ DKN D
Sbjct: 92 RWTFNLYDINKDGYINKEEMMDIVKAIYDMMGAYTYPVLAEDTPRQHVDVFFQKMDKNKD 151
Query: 230 GVVSVDE 236
G+V++DE
Sbjct: 152 GIVTLDE 158
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 176 TEKSFARRILS---IVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 232
+EK IL + D ++ G++SFK + G + + +E+ AD++GDG V
Sbjct: 5 SEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEV 64
Query: 233 SVDE 236
S E
Sbjct: 65 SEQE 68
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 32.3 bits (72), Expect = 0.76, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 171 EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKK-EELFKAADKNGD 229
++P E E + +++ + N +GQL+F EF +++ + ++ E FK D++GD
Sbjct: 41 QNPTEAE---LQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGD 97
Query: 230 GVVSVDE 236
G +S E
Sbjct: 98 GFISPAE 104
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 176 TEKSFARRILS---IVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 232
+EK IL + D ++ G++SFK + G + + +E+ AD++GDG V
Sbjct: 15 SEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEV 74
Query: 233 SVDE 236
S E
Sbjct: 75 SEQE 78
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D +Q+G +S E ++ G ++ + E++ K AD +GDG V+ +E
Sbjct: 12 KEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEE 66
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 31/55 (56%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D +Q+G +S E +++ G ++ + +E+ + AD +GDG ++ DE
Sbjct: 87 KEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDE 141
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 32.3 bits (72), Expect = 0.80, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Query: 147 EVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSD 203
E F L D I K + ++P E E + +++ VD + +G + F EF
Sbjct: 10 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGNGTIDFPEFLT 66
Query: 204 LISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+++ + + E F+ DK+G+G +S E
Sbjct: 67 MMARKMKDTDSEEIREAFRVFDKDGNGYISAAE 99
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 176 TEKSFARRILS---IVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 232
+EK IL + D ++ G++SFK + G + + +E+ AD++GDG V
Sbjct: 73 SEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEV 132
Query: 233 SVDE 236
S E
Sbjct: 133 SEQE 136
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 32.0 bits (71), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 12/67 (17%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISA----FGNQVAANKKEE--------LFKAADKNGD 229
R ++ D N+DG ++ +E D++ A G KE+ F+ DKN D
Sbjct: 128 RWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKD 187
Query: 230 GVVSVDE 236
G+V++DE
Sbjct: 188 GIVTLDE 194
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 32.0 bits (71), Expect = 0.86, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 12/67 (17%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISA----FGNQVAANKKEE--------LFKAADKNGD 229
R ++ D N+DG ++ +E D++ A G KE+ F+ DKN D
Sbjct: 95 RWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKD 154
Query: 230 GVVSVDE 236
G+V++DE
Sbjct: 155 GIVTLDE 161
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 12/64 (18%)
Query: 185 LSIVDYNQDGQLSFKEFSDLISAFGNQVAA------------NKKEELFKAADKNGDGVV 232
++ D N+DG ++ +E D++ A + + E F+ DKN DGVV
Sbjct: 144 FNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVV 203
Query: 233 SVDE 236
++DE
Sbjct: 204 TIDE 207
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 12/67 (17%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISA----FGNQVAANKKEE--------LFKAADKNGD 229
R ++ D N+DG ++ +E D++ A G KE+ F+ DKN D
Sbjct: 92 RWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKD 151
Query: 230 GVVSVDE 236
G+V++DE
Sbjct: 152 GIVTLDE 158
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D +Q+G +S E ++ G ++ + E++ K AD +GDG V+ +E
Sbjct: 7 KEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEE 61
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 31.6 bits (70), Expect = 1.2, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISAF---GNQVAANKKEELFKAADKNGDGVVSVDE 236
+++ +D + G + +E ++ +F G + + + KAADK+GDG + +DE
Sbjct: 45 KKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDE 102
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 29/64 (45%)
Query: 173 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 232
P K++A+ + D N DG L FK++ + K E F D +G+G +
Sbjct: 57 PEADPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTI 116
Query: 233 SVDE 236
S +E
Sbjct: 117 SKNE 120
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 29/64 (45%)
Query: 173 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 232
P K++A+ + D N DG L FK++ + K E F D +G+G +
Sbjct: 57 PEADPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTI 116
Query: 233 SVDE 236
S +E
Sbjct: 117 SKNE 120
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 110 VARISVFETNRLSKSNLEGY-CEVDLLEFLTKDSDAD-SEVFDLLDPSSSNKIVGK---I 164
V RI + + N+ G+ E + + LT++ A+ E F L D I K
Sbjct: 276 VNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGT 335
Query: 165 SLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKK-EELFKA 223
+ ++P E E + +++ VD + +G + F EF +++ + + ++ E F+
Sbjct: 336 VMRSLGQNPTEAE---LQDMINEVDADGNGTIDFPEFLTMMARWMKDTDSEEEIREAFRV 392
Query: 224 ADKNGDGVVSVDE 236
DK+G+G +S E
Sbjct: 393 FDKDGNGYISAAE 405
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 173 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 232
P K++A+ + D N DG L FKE+ + K E F D +G+G +
Sbjct: 65 PDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHXTTAGKTNQKLEWAFSLYDVDGNGTI 124
Query: 233 SVDE 236
S +E
Sbjct: 125 SKNE 128
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 9/58 (15%)
Query: 150 DLLDPSSSNKIVGKISLSCSVEDPIE------TEKSFARRILSIVDYNQDGQLSFKEF 201
+LLD S + K+ +CSVE E T + RI +VD N DGQLS EF
Sbjct: 116 ELLDIVES---IYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEF 170
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 31.2 bits (69), Expect = 1.4, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 138 LTKDSDAD-SEVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQD 193
LT++ A+ E F L D I K + ++P E E + +++ VD + D
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGD 60
Query: 194 GQLSFKEFSDLIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
G + F EF +++ + + + E F+ DK+G+G +S E
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 104
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D +Q+G +S E ++ G ++ + E++ K AD +GDG V+ +E
Sbjct: 86 KEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEE 140
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 200 EFSDLISAFGNQVAANKKE----ELFKAADKNGDGVVSVDE 236
EFS+ ++ Q+ N E E FK DKNGDG++S E
Sbjct: 65 EFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAE 105
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 110 VARISVFETNRLSKSNLEGY-CEVDLLEFLTKDSDAD-SEVFDLLDPSSSNKIVGK---I 164
V RI + + N+ G+ E + + LT++ A+ E F L D I K
Sbjct: 275 VNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGT 334
Query: 165 SLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS-AFGNQVAANKKEELFKA 223
+ ++P E E + +++ VD + DG + F EF +++ + + + E F+
Sbjct: 335 VMRSLGQNPTEAE---LQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 391
Query: 224 ADKNGDGVVSVDE 236
DK+G+G +S E
Sbjct: 392 FDKDGNGYISAAE 404
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 29/54 (53%)
Query: 183 RILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D ++ G++SFK + G + + +E+ AD++GDG V+ +E
Sbjct: 85 KAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRDGDGEVNEEE 138
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVA---ANKKEELFKAADKNGDGVVSVDE 236
+++ I+D ++ G + E ++ F + A A + + L A DK+GDG + V+E
Sbjct: 44 KKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVEE 101
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 110 VARISVFETNRLSKSNLEGY-CEVDLLEFLTKDSDAD-SEVFDLLDPSSSNKIVGK---I 164
V RI + + N+ G+ E + + LT++ A+ E F L D I K
Sbjct: 276 VNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGT 335
Query: 165 SLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKK-EELFKA 223
+ ++P E E + +++ VD + DG + F EF +++ + ++ E F+
Sbjct: 336 VMRSLGQNPTEAE---LQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRV 392
Query: 224 ADKNGDGVVSVDE 236
DK+G+G +S E
Sbjct: 393 FDKDGNGYISAAE 405
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 188 VDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+D ++DG +S EF + A G + +K F D N +G +S DE
Sbjct: 111 IDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDE 159
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 13/88 (14%)
Query: 177 EKSFARRILSIVDYNQDGQLSFKEFSDLISA------FGNQVAANKKEELFKAADKNGDG 230
E FAR I+SIVD N+ G ++F+ F D +S +QV A+ K A DKN
Sbjct: 760 EAEFAR-IMSIVDPNRMGVVTFQAFIDFMSRETADTDTADQVMASFK---ILAGDKN--- 812
Query: 231 VVSVDEXXXXXXXQQEKEPLMNCCPVCG 258
++VDE Q + + P G
Sbjct: 813 YITVDELRRELPPDQAEYCIARMAPYNG 840
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 173 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 232
P +FA + ++ D +++G + FKEF +S +K F+ D + +G++
Sbjct: 57 PFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLI 116
Query: 233 SVDE 236
S DE
Sbjct: 117 SYDE 120
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 12/106 (11%)
Query: 138 LTKDSDAD-SEVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQD 193
LT++ A+ E F L D I K + ++P E E + +++ VD + D
Sbjct: 296 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGD 352
Query: 194 GQLSFKEFSDLISAFGNQVAANKKEEL---FKAADKNGDGVVSVDE 236
G + F EF LI + +EE+ F+ DK+G+G +S E
Sbjct: 353 GTIDFPEF--LIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 396
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 183 RILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D ++ G++SFK + G + + +E AD++GDG VS E
Sbjct: 108 KAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEADRDGDGEVSEQE 161
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 31/55 (56%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D +Q+G +S E +++ G ++ + +E+ + AD +GDG ++ +E
Sbjct: 87 KEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 141
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 147 EVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSD 203
E F L D I K + ++P E E + +++ VD + +G + F EF +
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGNGTIDFPEFLN 70
Query: 204 LIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
L++ + + K +E F+ DK+G+G +S E
Sbjct: 71 LMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAE 104
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 30.0 bits (66), Expect = 3.3, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 176 TEKSFA--RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVS 233
TE+ A + S+ D + DG ++ KE ++ + G + +++ D +GDG +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 64
Query: 234 VDE 236
E
Sbjct: 65 FPE 67
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 26/64 (40%)
Query: 173 PIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVV 232
P FA + D N DG + F+EF +S K + F D +G+G +
Sbjct: 57 PYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYI 116
Query: 233 SVDE 236
S E
Sbjct: 117 SKAE 120
>pdb|1NSH|A Chain A, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
pdb|1NSH|B Chain B, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
Length = 101
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 183 RILSIVDYNQDGQLSFKEFSDLISAFG 209
R++ +D N DGQL F+EF +LI
Sbjct: 58 RMMKKLDLNSDGQLDFQEFLNLIGGLA 84
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 31/55 (56%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + D +Q+G +S E +++ G ++ + +E+ + AD +GDG ++ +E
Sbjct: 7 KEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 61
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISAFGNQ---VAANKKEELFKAADKNGDGVVSVDE 236
+++ I+D ++ G + E ++ F + ++A + + L A DK+GDG + V+E
Sbjct: 8 KKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 65
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 182 RRILSIVDYNQDGQLSFKEFSDLISAFGNQ---VAANKKEELFKAADKNGDGVVSVDE 236
+++ I+D ++ G + E ++ F + ++A + + L A DK+GDG + V+E
Sbjct: 44 KKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 101
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 29.6 bits (65), Expect = 4.2, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 138 LTKDSDAD-SEVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQD 193
LT++ A+ E F L D I K + ++P E E + +++ VD + +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGN 61
Query: 194 GQLSFKEFSDLIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
G + F EF +++ + + + E F+ DK+G+G +S E
Sbjct: 62 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 105
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 29.6 bits (65), Expect = 4.9, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 138 LTKDSDAD-SEVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQD 193
LT++ A+ E F L D I K + ++P E E + +++ VD + +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGN 60
Query: 194 GQLSFKEFSDLIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
G + F EF +++ + + + E F+ DK+G+G +S E
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAE 104
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 29.6 bits (65), Expect = 5.0, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 138 LTKDSDAD-SEVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQD 193
LT++ A+ E F L D I K + ++P E E + +++ VD + +
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGN 58
Query: 194 GQLSFKEFSDLIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
G + F EF +++ + + + E F+ DK+G+G +S E
Sbjct: 59 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 102
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 29.6 bits (65), Expect = 5.0, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 138 LTKDSDAD-SEVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQD 193
LT++ A+ E F L D I K + ++P E E + +++ VD + +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGN 61
Query: 194 GQLSFKEFSDLIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
G + F EF +++ + + + E F+ DK+G+G +S E
Sbjct: 62 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 105
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 29.6 bits (65), Expect = 5.0, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 138 LTKDSDAD-SEVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQD 193
LT++ A+ E F L D I K + ++P E E + +++ VD + +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGN 60
Query: 194 GQLSFKEFSDLIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
G + F EF +++ + + + E F+ DK+G+G +S E
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 104
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 29.6 bits (65), Expect = 5.0, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 138 LTKDSDAD-SEVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQD 193
LT++ A+ E F L D I K + ++P E E + +++ VD + +
Sbjct: 8 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGN 64
Query: 194 GQLSFKEFSDLIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
G + F EF +++ + + + E F+ DK+G+G +S E
Sbjct: 65 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 108
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 29.6 bits (65), Expect = 5.0, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 138 LTKDSDAD-SEVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQD 193
LT++ A+ E F L D I K + ++P E E + +++ VD + +
Sbjct: 6 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGN 62
Query: 194 GQLSFKEFSDLIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
G + F EF +++ + + + E F+ DK+G+G +S E
Sbjct: 63 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 106
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 138 LTKDSDAD-SEVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQD 193
LT++ A+ E F L D I K + ++P E E + +++ VD + +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGN 61
Query: 194 GQLSFKEFSDLIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
G + F EF +++ + + + E F+ DK+G+G +S E
Sbjct: 62 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 105
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 138 LTKDSDAD-SEVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQD 193
LT++ A+ E F L D I K + ++P E E + +++ VD + +
Sbjct: 10 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGN 66
Query: 194 GQLSFKEFSDLIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
G + F EF +++ + + + E F+ DK+G+G +S E
Sbjct: 67 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 110
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 138 LTKDSDAD-SEVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQD 193
LT++ A+ E F L D I K + ++P E E + +++ VD + +
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGN 58
Query: 194 GQLSFKEFSDLIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
G + F EF +++ + + + E F+ DK+G+G +S E
Sbjct: 59 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 102
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 138 LTKDSDAD-SEVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQD 193
LT++ A+ E F L D I K + ++P E E + +++ VD + +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGN 60
Query: 194 GQLSFKEFSDLIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
G + F EF +++ + + + E F+ DK+G+G +S E
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 104
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 138 LTKDSDAD-SEVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQD 193
LT++ A+ E F L D I K + ++P E E + +++ VD + +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGN 61
Query: 194 GQLSFKEFSDLIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
G + F EF +++ + + + E F+ DK+G+G +S E
Sbjct: 62 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 105
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 138 LTKDSDAD-SEVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQD 193
LT++ A+ E F L D I K + ++P E E + +++ VD + +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGN 61
Query: 194 GQLSFKEFSDLIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
G + F EF +++ + + + E F+ DK+G+G +S E
Sbjct: 62 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 105
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 138 LTKDSDAD-SEVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQD 193
LT++ A+ E F L D I K + ++P E E + +++ VD + +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGN 61
Query: 194 GQLSFKEFSDLIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
G + F EF +++ + + + E F+ DK+G+G +S E
Sbjct: 62 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 105
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 138 LTKDSDAD-SEVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQD 193
LT++ A+ E F L D I K + ++P E E + +++ VD + +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGN 60
Query: 194 GQLSFKEFSDLIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
G + F EF +++ + + + E F+ DK+G+G +S E
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 104
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 138 LTKDSDAD-SEVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQD 193
LT++ A+ E F L D I K + ++P E E + +++ VD + +
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGN 57
Query: 194 GQLSFKEFSDLIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
G + F EF +++ + + + E F+ DK+G+G +S E
Sbjct: 58 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 101
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 138 LTKDSDAD-SEVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQD 193
LT++ A+ E F L D I K + ++P E E + +++ VD + +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGN 60
Query: 194 GQLSFKEFSDLIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
G + F EF +++ + + + E F+ DK+G+G +S E
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 104
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 110 VARISVFETNRLSKSNLEGY-CEVDLLEFLTKDSDAD-SEVFDLLDPSSSNKIVGK---I 164
V RI + + N+ G+ E + + LT++ A+ E F L D I K
Sbjct: 277 VNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGT 336
Query: 165 SLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS-AFGNQVAANKKEELFKA 223
+ ++P E E + +++ VD + +G + F EF +++ + + + E F+
Sbjct: 337 VMRSLGQNPTEAE---LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 393
Query: 224 ADKNGDGVVSVDE 236
DK+G+G +S E
Sbjct: 394 FDKDGNGYISAAE 406
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 138 LTKDSDAD-SEVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQD 193
LT++ A+ E F L D I K + ++P E E + +++ VD + +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGN 61
Query: 194 GQLSFKEFSDLIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
G + F EF +++ + + + E F+ DK+G+G +S E
Sbjct: 62 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAE 105
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 110 VARISVFETNRLSKSNLEGY-CEVDLLEFLTKDSDAD-SEVFDLLDPSSSNKIVGK---I 164
V RI + + N+ G+ E + + LT++ A+ E F L D I K
Sbjct: 276 VNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGT 335
Query: 165 SLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS-AFGNQVAANKKEELFKA 223
+ ++P E E + +++ VD + +G + F EF +++ + + + E F+
Sbjct: 336 VMRSLGQNPTEAE---LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 392
Query: 224 ADKNGDGVVSVDE 236
DK+G+G +S E
Sbjct: 393 FDKDGNGYISAAE 405
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 138 LTKDSDAD-SEVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQD 193
LT++ A+ E F L D I K + ++P E E + +++ VD + +
Sbjct: 3 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGN 59
Query: 194 GQLSFKEFSDLIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
G + F EF +++ + + + E F+ DK+G+G +S E
Sbjct: 60 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 103
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 110 VARISVFETNRLSKSNLEGY-CEVDLLEFLTKDSDAD-SEVFDLLDPSSSNKIVGK---I 164
V RI + + N+ G+ E + + LT++ A+ E F L D I K
Sbjct: 276 VNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGT 335
Query: 165 SLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKK-EELFKA 223
+ ++P E E + +++ VD + +G + F EF +++ + ++ E F+
Sbjct: 336 VMRSLGQNPTEAE---LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 392
Query: 224 ADKNGDGVVSVDE 236
DK+G+G +S E
Sbjct: 393 FDKDGNGYISAAE 405
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 29.3 bits (64), Expect = 5.5, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 138 LTKDSDAD-SEVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQD 193
LT++ A+ E F L D I K + ++P E E + +++ VD + +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGN 61
Query: 194 GQLSFKEFSDLIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
G + F EF +++ + + + E F+ DK+G+G +S E
Sbjct: 62 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAE 105
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 29.3 bits (64), Expect = 5.5, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 138 LTKDSDAD-SEVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQD 193
LT++ A+ E F L D I K + ++P E E + +++ VD + +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGN 60
Query: 194 GQLSFKEFSDLIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
G + F EF +++ + + + E F+ DK+G+G +S E
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAE 104
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 11/98 (11%)
Query: 150 DLLDPSSSNKIVGKISLSCSVEDP-----IETEKSFA---RRILSIVDYNQDGQLSFKEF 201
DLL+ K VG S + S + + +K A +++ ++D ++ G + E
Sbjct: 5 DLLNAEDIKKAVGAFSATDSFDHKKFFQMVGLKKKSADDVKKVFHMLDKDKSGFIEEDEL 64
Query: 202 SDLISAF---GNQVAANKKEELFKAADKNGDGVVSVDE 236
++ F ++A + + L A DK+GDG + VDE
Sbjct: 65 GFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDE 102
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 110 VARISVFETNRLSKSNLEGY-CEVDLLEFLTKDSDAD-SEVFDLLDPSSSNKIVGK---I 164
V RI + + N+ G+ E + + LT++ A+ E F L D I K
Sbjct: 239 VNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGT 298
Query: 165 SLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS-AFGNQVAANKKEELFKA 223
+ ++P E E + +++ VD + +G + F EF +++ + + + E F+
Sbjct: 299 VMRSLGQNPTEAE---LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 355
Query: 224 ADKNGDGVVSVDE 236
DK+G+G +S E
Sbjct: 356 FDKDGNGYISAAE 368
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 180 FARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + IVD +Q+G ++ E+ A G ++ EE F+ D + G + VDE
Sbjct: 110 WGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDE 166
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 110 VARISVFETNRLSKSNLEGY-CEVDLLEFLTKDSDAD-SEVFDLLDPSSSNKIVGK---I 164
V RI + + N+ G+ E + + LT++ A+ E F L D I K
Sbjct: 276 VNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGT 335
Query: 165 SLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKK-EELFKA 223
+ ++P E E + +++ VD + +G + F EF +++ + ++ E F+
Sbjct: 336 VMRSLGQNPTEAE---LQDMINEVDADGNGTIDFPEFLTMMARKMKYTDSEEEIREAFRV 392
Query: 224 ADKNGDGVVSVDE 236
DK+G+G +S E
Sbjct: 393 FDKDGNGYISAAE 405
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 29.3 bits (64), Expect = 6.8, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 147 EVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSD 203
E F L D I K + ++P E E + +++ VD + +G + F EF
Sbjct: 10 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGNGTIDFPEFLT 66
Query: 204 LIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+++ + + + E F+ DK+G+G +S E
Sbjct: 67 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 100
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 29.3 bits (64), Expect = 6.9, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 147 EVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSD 203
E F L D I K + ++P E E + +++ VD + +G + F EF
Sbjct: 12 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGNGTIDFPEFLT 68
Query: 204 LIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+++ + + + E F+ DK+G+G +S E
Sbjct: 69 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 102
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 13/112 (11%)
Query: 135 LEFLTKDSDADS------EVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRIL 185
LE+ T+D + E F L D I K + ++P E E + ++
Sbjct: 263 LEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMI 319
Query: 186 SIVDYNQDGQLSFKEFSDLIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ VD + +G + F EF +++ + + + E F+ DK+G+G +S E
Sbjct: 320 NEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 371
>pdb|1O5D|L Chain L, Dissecting And Designing Inhibitor Selectivity
Determinants At The S1 Site Using An Artificial Ala190
Protease (Ala190 Upa)
pdb|2B7D|L Chain L, Factor Viia Inhibitors: Chemical Optimization, Preclinical
Pharmacokinetics, Pharmacodynamics, And Efficacy In A
Baboon Thrombosis Model
pdb|2F9B|L Chain L, Discovery Of Novel Heterocyclic Factor Viia Inhibitors
pdb|2FLB|L Chain L, Discovery Of A Novel Hydroxy Pyrazole Based Factor Ixa
Inhibitor
pdb|2FLR|L Chain L, Novel 5-azaindole Factor Viia Inhibitors
pdb|3ELA|L Chain L, Crystal Structure Of Active Site Inhibited Coagulation
Factor Viia Mutant In Complex With Soluble Tissue Factor
Length = 152
Score = 28.9 bits (63), Expect = 7.4, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 419 FIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWI 461
F+ EL+PG+ +C E + C+ + FK E + FWI
Sbjct: 4 FLEELRPGSLERECKEEQ----CSFEEAREIFKDAERTKLFWI 42
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 171 EDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDG 230
E + EK + + ++D + DG+L+ +E + FG + ++ AD NGDG
Sbjct: 67 EQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQ----IMKADANGDG 122
Query: 231 VVSVDE 236
++++E
Sbjct: 123 YITLEE 128
>pdb|1UHH|A Chain A, Crystal Structure Of Cp-Aequorin
pdb|1UHH|B Chain B, Crystal Structure Of Cp-Aequorin
pdb|1UHJ|A Chain A, Crystal Structure Of Br-Aequorin
pdb|1UHJ|B Chain B, Crystal Structure Of Br-Aequorin
Length = 191
Score = 28.9 bits (63), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 180 FARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + IVD +Q+G ++ E+ A G ++ EE F+ D + G + VDE
Sbjct: 110 WGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDE 166
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 28.9 bits (63), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 148 VFDLLDPSSSNKIVGK--ISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLI 205
F + D S KI K L + I+ E+ I+ VD N+DG++ F EF +++
Sbjct: 422 AFKMFDKDGSGKISTKELFKLFSQADSSIQMEE--LESIIEQVDNNKDGEVDFNEFVEML 479
Query: 206 SAF 208
F
Sbjct: 480 QNF 482
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 28.9 bits (63), Expect = 8.3, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 10/78 (12%)
Query: 162 GKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLS---FKEFSDLISAFGNQVAANKKE 218
K+ L+ D I ++ ++D ++ G + K F + SA + + +
Sbjct: 32 AKVGLTAKSADDI-------KKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETK 84
Query: 219 ELFKAADKNGDGVVSVDE 236
KA D +GDG + VDE
Sbjct: 85 AFLKAGDSDGDGAIGVDE 102
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 28.9 bits (63), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 147 EVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSD 203
E F L D I K + ++P E E + +++ VD + +G + F EF +
Sbjct: 11 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGNGTIDFPEFLN 67
Query: 204 LIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
L++ + + + +E F+ DK+G+G +S E
Sbjct: 68 LMARKMKDTDSEEELKEAFRVFDKDGNGFISAAE 101
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 28.9 bits (63), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 28/57 (49%)
Query: 180 FARRILSIVDYNQDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+ + I+D +Q+G +S E+ + G ++ EE F+ D + G + VDE
Sbjct: 110 WGDALFDIIDKDQNGAISLDEWKAYTKSAGIIQSSEDCEETFRVCDIDESGQLDVDE 166
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 192 QDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+DG +S KE ++ G + +E+ D++G G V DE
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 192 QDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+DG +S KE ++ G + +E+ D++G G V DE
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 28.9 bits (63), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 153 DPSSSNKIVGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS-AFGNQ 211
D + + K +G + S ++P E E + +++ VD + +G + F EF L++ Q
Sbjct: 24 DGTITTKELGTVMRSLG-QNPTEAE---LQDMINEVDADGNGTIDFPEFLSLMARKMKEQ 79
Query: 212 VAANKKEELFKAADKNGDGVVSVDE 236
+ + E FK D++G+G++S E
Sbjct: 80 DSEEELIEAFKVFDRDGNGLISAAE 104
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 28.9 bits (63), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 153 DPSSSNKIVGKISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSDLIS-AFGNQ 211
D + + K +G + S ++P E E + +++ VD + +G + F EF L++ Q
Sbjct: 24 DGTITTKELGTVMRSLG-QNPTEAE---LQDMINEVDADGNGTIDFPEFLSLMARKMKEQ 79
Query: 212 VAANKKEELFKAADKNGDGVVSVDE 236
+ + E FK D++G+G++S E
Sbjct: 80 DSEEELIEAFKVFDRDGNGLISAAE 104
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 28.9 bits (63), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 147 EVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSD 203
E F L D I K + ++P E E + +++ VD + +G + F EF
Sbjct: 281 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGNGTIDFPEFLT 337
Query: 204 LIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+++ + + + E F+ DK+G+G +S E
Sbjct: 338 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 371
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 28.5 bits (62), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 147 EVFDLLDPSSSNKIVGK---ISLSCSVEDPIETEKSFARRILSIVDYNQDGQLSFKEFSD 203
E F L D I K + ++P E E + +++ VD + +G + F EF +
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE---LQDMINEVDADGNGTIDFPEFLN 70
Query: 204 LIS-AFGNQVAANKKEELFKAADKNGDGVVSVDE 236
L++ + + + +E F+ DK+G+G +S E
Sbjct: 71 LMARKMKDTDSEEELKEAFRVFDKDGNGFISAAE 104
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 28.5 bits (62), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 192 QDGQLSFKEFSDLISAFGNQVAANKKEELFKAADKNGDGVVSVDE 236
+DG +S KE ++ G + +E+ D++G G V DE
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,164,016
Number of Sequences: 62578
Number of extensions: 600786
Number of successful extensions: 1944
Number of sequences better than 100.0: 184
Number of HSP's better than 100.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 106
Number of HSP's that attempted gapping in prelim test: 1618
Number of HSP's gapped (non-prelim): 385
length of query: 570
length of database: 14,973,337
effective HSP length: 104
effective length of query: 466
effective length of database: 8,465,225
effective search space: 3944794850
effective search space used: 3944794850
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)