Query 008314
Match_columns 570
No_of_seqs 277 out of 368
Neff 5.5
Searched_HMMs 13730
Date Mon Mar 25 23:16:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008314.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/008314hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1iyjb4 b.40.4.3 (B:2732-2760, 11.9 65 0.0047 26.1 2.9 32 49-80 18-53 (111)
2 d1dfca3 b.42.5.1 (A:1260-1382) 9.7 58 0.0042 26.2 1.9 18 391-408 106-123 (123)
3 d1jkna_ d.113.1.1 (A:) Diadeno 8.5 89 0.0065 25.7 2.7 16 157-172 8-24 (165)
4 d2d3na1 b.71.1.1 (A:399-485) B 8.0 1.6E+02 0.012 22.6 3.8 33 397-429 19-56 (87)
5 d1ud2a1 b.71.1.1 (A:391-480) B 7.8 1.6E+02 0.012 22.8 3.8 45 374-429 10-59 (90)
6 d1zhva1 d.58.18.8 (A:2-61) Hyp 7.1 1.7E+02 0.012 21.0 3.3 26 29-54 22-47 (60)
7 d1x99a_ b.97.1.2 (A:) Lectin x 6.9 1.5E+02 0.011 24.9 3.3 27 402-428 55-81 (145)
8 d1vgya2 d.58.19.1 (A:181-293) 6.2 81 0.0059 24.5 1.1 17 443-459 9-25 (113)
9 d1oh0a_ d.17.4.3 (A:) Delta-5- 6.1 1.1E+02 0.0084 23.0 2.1 31 259-297 1-31 (125)
10 d2c9aa2 b.29.1.25 (A:21-183) R 6.0 3.1E+02 0.023 21.5 5.1 46 390-435 111-158 (163)
No 1
>d1iyjb4 b.40.4.3 (B:2732-2760,B:2898-2979) OB-fold domains of BRCA2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=11.88 E-value=65 Score=26.12 Aligned_cols=32 Identities=13% Similarity=0.394 Sum_probs=19.9
Q ss_pred CeeEEecccceeeeecc----CCCCCCCcEEEeecC
Q 008314 49 ELEVFKITKLESIWNYN----VLGGEAKGVTFYKPG 80 (570)
Q Consensus 49 ~L~V~~~t~Fe~VW~~~----~sg~~~~~~SfWrP~ 80 (570)
.+.|.++--.++||.-+ .-..+..-+|||||.
T Consensus 18 d~~~~r~yp~~~~~~lRV~DYrk~EKsalLSIWRP~ 53 (111)
T d1iyjb4 18 DVIVQRVYPLQWVWKLRVTSYKKREKSALLSIWRPS 53 (111)
T ss_dssp CBCCCEECCCEEEEEEEECBSSSSCCCEEEEEESCC
T ss_pred EEEEEecccHHHhhhhheeeccccccceEEEEeCCc
Confidence 44556666667788743 112223569999998
No 2
>d1dfca3 b.42.5.1 (A:1260-1382) Fascin {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.68 E-value=58 Score=26.18 Aligned_cols=18 Identities=28% Similarity=0.305 Sum_probs=15.7
Q ss_pred cccCccccceeeEEEEeC
Q 008314 391 KIGEHVSDWEHFTLRVSN 408 (570)
Q Consensus 391 ~~G~HvGDWEh~tvr~~n 408 (570)
-.++++|+||.++|++.|
T Consensus 106 a~~~~~g~~e~f~i~l~N 123 (123)
T d1dfca3 106 ASVETAGDSELFLMKLIN 123 (123)
T ss_dssp SCCSSCCSSSEEEEEECS
T ss_pred EccCCCCCceEEEEEEcC
Confidence 457899999999999976
No 3
>d1jkna_ d.113.1.1 (A:) Diadenosine tetraphosphate hydrolase (Ap4A hydrolase) {Narrow-leaved blue lupine (Lupinus angustifolius) [TaxId: 3871]}
Probab=8.45 E-value=89 Score=25.66 Aligned_cols=16 Identities=44% Similarity=0.980 Sum_probs=12.4
Q ss_pred cCCCCee-eecEEEeCC
Q 008314 157 NPPMGYK-AMGILVTNT 172 (570)
Q Consensus 157 vpP~GYv-AlG~Vvt~~ 172 (570)
.||+||+ ++|.|+.+.
T Consensus 8 ~~~~~yR~~Vg~vI~n~ 24 (165)
T d1jkna_ 8 SPPEGYRRNVGICLMNN 24 (165)
T ss_dssp SCCSSEEEEEEEEEECT
T ss_pred CCCCCccccEEEEEEeC
Confidence 4788998 588888765
No 4
>d2d3na1 b.71.1.1 (A:399-485) Bacterial alpha-Amylase {Bacillus sp. 707 [TaxId: 1416]}
Probab=8.01 E-value=1.6e+02 Score=22.61 Aligned_cols=33 Identities=18% Similarity=0.353 Sum_probs=23.0
Q ss_pred cccee----eEEEEeCCCCcEeEEEeeecCCC-ceeeC
Q 008314 397 SDWEH----FTLRVSNFTGELWQVYFSEHSGG-RWRDA 429 (570)
Q Consensus 397 GDWEh----~tvr~~n~~G~p~~v~~S~H~~G-~~~~~ 429 (570)
||.|| +.|.++|..+--+.||...+..| .|+++
T Consensus 19 G~~~hp~sGlAvv~Sng~~g~K~M~VG~~~Ag~~w~D~ 56 (87)
T d2d3na1 19 GNTAHPNSGLATIMSDGAGGSKWMFVGRNKAGQVWSDI 56 (87)
T ss_dssp CCTTSTTCCEEEEEESSSCEEEEEECCGGGTTCEEEET
T ss_pred CCccCCCCCEEEEEeCCCCceEEEEeCcccCCCEEEEc
Confidence 56777 78888995555578888765544 56664
No 5
>d1ud2a1 b.71.1.1 (A:391-480) Bacterial alpha-Amylase {Bacillus sp., ksm-k38 [TaxId: 1409]}
Probab=7.82 E-value=1.6e+02 Score=22.76 Aligned_cols=45 Identities=22% Similarity=0.300 Sum_probs=29.2
Q ss_pred CCCCccceeeeeecccccccCcccccee----eEEEEeCCCCcEeEEEeeecCCC-ceeeC
Q 008314 374 FNGPVTLKVGLLSIAMTKIGEHVSDWEH----FTLRVSNFTGELWQVYFSEHSGG-RWRDA 429 (570)
Q Consensus 374 fN~~~~~~~G~~~~~~~~~G~HvGDWEh----~tvr~~n~~G~p~~v~~S~H~~G-~~~~~ 429 (570)
|+.+. |+|+. +. ||.|| +.|.++|..+--+.|+...+..| .|++.
T Consensus 10 fD~~n--cIGwv-----R~----G~~~~p~sGlAvv~Sng~~g~K~M~VG~~~Ag~~w~D~ 59 (90)
T d1ud2a1 10 FDHWD--VVGWT-----RE----GSSSRPNSGLATIMSNGPGGSKWMYVGRQNAGQTWTDL 59 (90)
T ss_dssp CCSSS--EEEEE-----EC----CCTTSTTCCEEEEEESSSCEEEEEECCGGGTTCEEEET
T ss_pred cCCCC--EEEEE-----Ee----CCcCCCCCCEEEEEeCCCCceEEEEeCcccCCCEEEEc
Confidence 45555 35764 33 56676 78888995555678888776555 46663
No 6
>d1zhva1 d.58.18.8 (A:2-61) Hypothetical protein Atu0741 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=7.15 E-value=1.7e+02 Score=20.97 Aligned_cols=26 Identities=31% Similarity=0.590 Sum_probs=20.3
Q ss_pred CCCCCCCCCCcceeeeeecCCeeEEe
Q 008314 29 SPIPQWPQGTGFATGKINLGELEVFK 54 (570)
Q Consensus 29 ~p~p~~p~g~~fa~g~i~lg~L~V~~ 54 (570)
++||+|-.+++|.+-.-.-.||-|+-
T Consensus 22 s~iP~w~~~~~f~sItrT~dELSvVC 47 (60)
T d1zhva1 22 EAIPAWADGGGFVSITRTDDELSIVC 47 (60)
T ss_dssp CCCCTTTSSSSCCEEEECSSCEEEEE
T ss_pred CCCCccccCCCEEEEEecCCceEEEE
Confidence 79999999999977665666777653
No 7
>d1x99a_ b.97.1.2 (A:) Lectin xcl {Xerocomus chrysenteron [TaxId: 5386]}
Probab=6.89 E-value=1.5e+02 Score=24.89 Aligned_cols=27 Identities=33% Similarity=0.367 Sum_probs=24.8
Q ss_pred eEEEEeCCCCcEeEEEeeecCCCceee
Q 008314 402 FTLRVSNFTGELWQVYFSEHSGGRWRD 428 (570)
Q Consensus 402 ~tvr~~n~~G~p~~v~~S~H~~G~~~~ 428 (570)
=||||.+.+|+--.|-+.-|.-..|.|
T Consensus 55 GmLRF~~~~Ge~F~VavGVHNYk~WcD 81 (145)
T d1x99a_ 55 GMLRFMSTKGERITVAVGVHNYKRWCD 81 (145)
T ss_dssp EEEEEEETTCCEEEEEEEEETTEEEEE
T ss_pred eeEEEEcCCCCEEEEEEeeecCCchhe
Confidence 389999999999999999999999888
No 8
>d1vgya2 d.58.19.1 (A:181-293) Succinyl-diaminopimelate desuccinylase {Neisseria meningitidis [TaxId: 487]}
Probab=6.17 E-value=81 Score=24.54 Aligned_cols=17 Identities=29% Similarity=0.597 Sum_probs=13.9
Q ss_pred EecCCCccCCCCCcccc
Q 008314 443 YSSKHGHASFPHAGTYL 459 (570)
Q Consensus 443 Ysa~gsHa~Y~~~G~~~ 459 (570)
--++++||.||+-|.-.
T Consensus 9 i~Gk~gHaa~P~~g~Np 25 (113)
T d1vgya2 9 VKGKQGHIAYPHLAINP 25 (113)
T ss_dssp EECBCEETTCGGGCBCH
T ss_pred EEEEeecccCcccCCCc
Confidence 35899999999988763
No 9
>d1oh0a_ d.17.4.3 (A:) Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI {Pseudomonas putida [TaxId: 303]}
Probab=6.06 E-value=1.1e+02 Score=23.03 Aligned_cols=31 Identities=16% Similarity=0.214 Sum_probs=20.1
Q ss_pred CCChHHHHHHHHHhccEEEeCCCCccCCCCHHHHHhcce
Q 008314 259 MPNLDQIHALIKHYGPTVFFHPDEEYLPSSVPWFFKNGA 297 (570)
Q Consensus 259 mP~~~qi~~lv~~yAP~v~lh~~E~y~Pssv~~fl~n~~ 297 (570)
||+.+++.+++++|. +.+---|++..++..+
T Consensus 1 mpt~e~~~~~v~~y~--------~a~~~~D~d~~~~l~~ 31 (125)
T d1oh0a_ 1 LPTAQEVQGLMARYI--------ELVDVGDIEAIVQMYA 31 (125)
T ss_dssp CCCHHHHHHHHHHHH--------HHHHHTCHHHHHHHEE
T ss_pred CCCHHHHHHHHHHHH--------HHHHcCCHHHHHHHhC
Confidence 788888888888875 2334445666555444
No 10
>d2c9aa2 b.29.1.25 (A:21-183) Receptor-type tyrosine-protein phosphatase mu {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.01 E-value=3.1e+02 Score=21.46 Aligned_cols=46 Identities=22% Similarity=0.411 Sum_probs=26.0
Q ss_pred ccccCccccceeeEEEEeCCCCcEeEEEeeecCCC--ceeeCCcceee
Q 008314 390 TKIGEHVSDWEHFTLRVSNFTGELWQVYFSEHSGG--RWRDAFELEYI 435 (570)
Q Consensus 390 ~~~G~HvGDWEh~tvr~~n~~G~p~~v~~S~H~~G--~~~~~~~le~~ 435 (570)
...|++-..|++..|-|....++...|-|-.-..+ ..+..+|+.|.
T Consensus 111 ~~~~~~~~~W~~~~v~l~~~~~~~fqvif~~~~~~~~g~IAIDDI~~~ 158 (163)
T d2c9aa2 111 NISGDPTRTWNRAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVL 158 (163)
T ss_dssp EECCCCCCCEEEEEEEECCCTTSCEEEEEEEEECSSCCEEEEEEEEEE
T ss_pred EeccccCCcceEEEEEEcCCCCcEEEEEEEEEECCCcEEEEEeEEEEe
Confidence 45677778999999999643344444443222221 12444565543
Done!