Query 008319
Match_columns 570
No_of_seqs 215 out of 1754
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 23:23:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008319.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008319hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gr4_A Pyruvate kinase isozyme 100.0 3E-135 1E-139 1108.5 50.4 484 74-569 45-550 (550)
2 4drs_A Pyruvate kinase; glycol 100.0 5E-134 2E-138 1098.2 50.3 472 95-569 40-526 (526)
3 3khd_A Pyruvate kinase; malari 100.0 1E-134 5E-139 1097.3 44.5 471 96-569 43-520 (520)
4 3gg8_A Pyruvate kinase; malari 100.0 3E-133 1E-137 1086.2 46.5 471 96-569 33-511 (511)
5 3hqn_D Pyruvate kinase, PK; TI 100.0 2E-133 7E-138 1086.1 43.2 471 94-569 15-499 (499)
6 3t05_A Pyruvate kinase, PK; te 100.0 1E-132 4E-137 1102.3 45.5 478 89-569 13-494 (606)
7 1e0t_A Pyruvate kinase, PK; ph 100.0 2E-131 6E-136 1067.7 50.7 465 98-568 1-470 (470)
8 2e28_A Pyruvate kinase, PK; al 100.0 1E-128 4E-133 1072.5 50.3 468 98-568 2-474 (587)
9 3qtg_A Pyruvate kinase, PK; TI 100.0 7E-128 3E-132 1032.2 46.2 444 97-566 13-460 (461)
10 1a3w_A Pyruvate kinase; allost 100.0 4E-127 2E-131 1041.1 41.1 483 74-568 3-500 (500)
11 1izc_A Macrophomate synthase i 99.7 4.9E-18 1.7E-22 177.7 6.8 148 271-433 108-302 (339)
12 2vws_A YFAU, 2-keto-3-deoxy su 99.7 3.9E-18 1.3E-22 172.8 -1.9 126 269-408 79-239 (267)
13 2v5j_A 2,4-dihydroxyhept-2-ENE 99.7 5.6E-18 1.9E-22 173.5 -1.6 127 269-409 100-261 (287)
14 3qz6_A HPCH/HPAI aldolase; str 99.6 6.9E-16 2.4E-20 156.0 9.0 127 271-410 79-240 (261)
15 1dxe_A 2-dehydro-3-deoxy-galac 99.6 6.2E-17 2.1E-21 163.0 0.8 127 269-409 80-240 (256)
16 1sgj_A Citrate lyase, beta sub 99.5 1.8E-14 6.1E-19 146.9 11.6 134 263-405 76-220 (284)
17 2xz9_A Phosphoenolpyruvate-pro 99.3 5.3E-12 1.8E-16 131.3 9.3 133 263-406 118-277 (324)
18 3qll_A Citrate lyase; beta bar 99.2 5.6E-11 1.9E-15 123.2 9.7 133 266-405 113-255 (316)
19 1u5h_A CITE; TIM barrel, struc 99.1 1.8E-10 6.1E-15 117.0 10.4 125 266-405 70-208 (273)
20 3qqw_A Putative citrate lyase; 99.1 3E-10 1E-14 118.5 10.2 133 266-405 94-254 (332)
21 2ols_A Phosphoenolpyruvate syn 99.0 4E-10 1.4E-14 129.7 9.1 134 265-408 622-779 (794)
22 3r4i_A Citrate lyase; TIM beta 99.0 1.7E-09 5.7E-14 113.2 11.1 132 267-405 94-253 (339)
23 2hwg_A Phosphoenolpyruvate-pro 98.9 1.5E-09 5E-14 120.7 9.4 133 263-406 367-526 (575)
24 2wqd_A Phosphoenolpyruvate-pro 98.9 1.8E-09 6E-14 120.0 9.0 132 264-406 370-528 (572)
25 3oyz_A Malate synthase; TIM ba 98.8 8.1E-09 2.8E-13 110.4 9.8 138 266-417 94-263 (433)
26 1vbg_A Pyruvate,orthophosphate 98.4 4.8E-07 1.6E-11 104.9 8.6 134 263-407 680-861 (876)
27 1kbl_A PPDK, pyruvate phosphat 98.2 1.1E-06 3.8E-11 101.8 7.6 134 263-407 673-855 (873)
28 3cux_A Malate synthase; TIM ba 97.7 5.6E-05 1.9E-09 82.9 7.9 121 278-406 202-364 (528)
29 3cuz_A MSA, malate synthase A; 97.7 0.00011 3.9E-09 80.6 9.9 132 270-405 195-365 (532)
30 1p7t_A MSG, malate synthase G; 97.5 0.0001 3.5E-09 82.7 6.5 130 270-406 372-536 (731)
31 1h6z_A Pyruvate phosphate diki 97.3 0.00076 2.6E-08 78.4 11.4 137 260-407 697-881 (913)
32 2x0s_A Pyruvate phosphate diki 95.8 0.044 1.5E-06 64.1 12.4 114 283-407 727-881 (913)
33 4af0_A Inosine-5'-monophosphat 95.4 0.21 7.2E-06 54.9 15.0 125 266-406 279-413 (556)
34 3f4w_A Putative hexulose 6 pho 93.8 0.59 2E-05 44.2 12.2 137 273-428 70-209 (211)
35 4fo4_A Inosine 5'-monophosphat 93.5 1.1 3.7E-05 47.1 14.5 122 268-406 108-240 (366)
36 1t57_A Conserved protein MTH16 93.2 0.38 1.3E-05 46.4 9.6 98 451-550 36-174 (206)
37 3ffs_A Inosine-5-monophosphate 93.2 0.8 2.7E-05 48.6 13.0 119 270-406 146-275 (400)
38 3ovp_A Ribulose-phosphate 3-ep 93.0 0.81 2.8E-05 44.7 11.9 138 272-430 79-221 (228)
39 3usb_A Inosine-5'-monophosphat 92.8 1.1 3.7E-05 49.0 13.8 124 267-406 255-388 (511)
40 3inp_A D-ribulose-phosphate 3- 92.6 0.87 3E-05 45.2 11.7 139 272-427 101-244 (246)
41 1jqo_A Phosphoenolpyruvate car 92.4 0.23 7.9E-06 58.2 8.1 113 274-386 519-653 (970)
42 3odm_A Pepcase, PEPC, phosphoe 92.4 0.12 4.2E-06 56.6 5.5 92 279-370 138-259 (560)
43 3ctl_A D-allulose-6-phosphate 92.3 1.9 6.6E-05 42.2 13.6 137 273-428 73-219 (231)
44 1h1y_A D-ribulose-5-phosphate 91.9 2.9 9.9E-05 40.2 14.3 141 272-428 79-223 (228)
45 3khj_A Inosine-5-monophosphate 90.7 3.1 0.00011 43.3 14.0 119 270-406 107-236 (361)
46 4fxs_A Inosine-5'-monophosphat 90.7 2.2 7.6E-05 46.3 13.3 123 267-406 230-363 (496)
47 2qjg_A Putative aldolase MJ040 90.7 2.1 7.1E-05 42.1 12.0 42 114-155 102-145 (273)
48 2fli_A Ribulose-phosphate 3-ep 90.7 3.7 0.00013 38.7 13.4 137 272-425 76-217 (220)
49 1jqn_A Pepcase, PEPC, phosphoe 90.6 0.25 8.6E-06 57.4 5.9 145 279-430 467-639 (883)
50 3r2g_A Inosine 5'-monophosphat 90.3 2.7 9.3E-05 44.0 13.0 119 267-406 99-228 (361)
51 1vp8_A Hypothetical protein AF 90.3 6.6 0.00023 37.7 14.4 98 451-550 28-167 (201)
52 2z6i_A Trans-2-enoyl-ACP reduc 89.5 2.4 8.1E-05 43.4 11.7 111 271-406 79-191 (332)
53 1ydn_A Hydroxymethylglutaryl-C 89.5 4.1 0.00014 40.8 13.3 155 265-429 23-197 (295)
54 3igs_A N-acetylmannosamine-6-p 89.5 6.7 0.00023 38.2 14.4 136 269-429 90-230 (232)
55 4avf_A Inosine-5'-monophosphat 89.4 3.3 0.00011 44.8 13.3 123 267-406 228-361 (490)
56 1jcn_A Inosine monophosphate d 89.3 6.1 0.00021 42.8 15.4 120 268-407 255-388 (514)
57 3ble_A Citramalate synthase fr 88.7 7.4 0.00025 40.0 14.8 197 264-478 37-250 (337)
58 3ajx_A 3-hexulose-6-phosphate 88.6 3.5 0.00012 38.6 11.4 132 273-424 70-204 (207)
59 1tqj_A Ribulose-phosphate 3-ep 88.5 1.2 4.2E-05 43.3 8.4 137 272-424 77-219 (230)
60 1w8s_A FBP aldolase, fructose- 88.0 7.6 0.00026 38.5 13.9 74 267-343 158-237 (263)
61 3bo9_A Putative nitroalkan dio 88.0 4.5 0.00015 41.3 12.5 112 270-406 92-205 (326)
62 3cu2_A Ribulose-5-phosphate 3- 87.5 4 0.00014 40.1 11.3 134 271-425 83-235 (237)
63 2c6q_A GMP reductase 2; TIM ba 87.5 9.7 0.00033 39.4 14.8 123 269-407 119-253 (351)
64 3q58_A N-acetylmannosamine-6-p 86.7 9.3 0.00032 37.1 13.4 131 270-425 91-226 (229)
65 1y0e_A Putative N-acetylmannos 86.3 9.4 0.00032 36.0 13.0 136 270-424 78-219 (223)
66 1rpx_A Protein (ribulose-phosp 85.9 6.8 0.00023 37.4 11.9 137 271-424 82-225 (230)
67 3jr2_A Hexulose-6-phosphate sy 84.8 2.5 8.5E-05 40.4 8.1 137 274-428 77-215 (218)
68 2ftp_A Hydroxymethylglutaryl-C 84.3 14 0.00048 37.1 13.9 161 264-429 26-201 (302)
69 1eep_A Inosine 5'-monophosphat 83.5 12 0.00041 39.1 13.5 121 268-406 153-285 (404)
70 3bw2_A 2-nitropropane dioxygen 83.4 15 0.00053 37.8 14.0 113 270-406 112-237 (369)
71 1mxs_A KDPG aldolase; 2-keto-3 82.8 16 0.00054 35.4 13.0 116 271-426 42-161 (225)
72 1vrd_A Inosine-5'-monophosphat 82.8 12 0.00041 40.1 13.3 122 268-406 237-369 (494)
73 1p1x_A Deoxyribose-phosphate a 82.5 4.3 0.00015 40.6 8.9 149 263-429 23-193 (260)
74 1w8s_A FBP aldolase, fructose- 82.5 8.8 0.0003 38.0 11.2 128 266-406 39-179 (263)
75 1h1y_A D-ribulose-5-phosphate 82.4 7.7 0.00026 37.2 10.5 134 270-429 22-171 (228)
76 1gte_A Dihydropyrimidine dehyd 82.3 10 0.00035 44.6 13.5 120 273-407 654-817 (1025)
77 2gjl_A Hypothetical protein PA 81.7 12 0.0004 38.0 12.1 112 271-406 87-201 (328)
78 1vhc_A Putative KHG/KDPG aldol 81.5 16 0.00055 35.4 12.4 103 271-405 33-136 (224)
79 1wbh_A KHG/KDPG aldolase; lyas 81.1 14 0.00046 35.6 11.7 103 271-405 32-135 (214)
80 2yw3_A 4-hydroxy-2-oxoglutarat 80.9 11 0.00038 35.9 10.9 102 271-406 29-131 (207)
81 1yad_A Regulatory protein TENI 80.8 16 0.00056 34.4 12.2 131 274-428 82-214 (221)
82 3qja_A IGPS, indole-3-glycerol 80.5 14 0.00049 36.8 12.0 131 272-424 127-260 (272)
83 1f76_A Dihydroorotate dehydrog 80.5 25 0.00086 35.5 14.2 116 279-406 164-318 (336)
84 2qjg_A Putative aldolase MJ040 80.4 38 0.0013 32.9 15.0 135 271-428 103-259 (273)
85 1xi3_A Thiamine phosphate pyro 80.4 24 0.00082 32.7 13.0 130 274-428 80-212 (215)
86 1tqx_A D-ribulose-5-phosphate 80.0 7.7 0.00026 37.8 9.6 131 281-427 86-222 (227)
87 3eeg_A 2-isopropylmalate synth 79.4 51 0.0017 33.6 16.0 159 264-430 24-194 (325)
88 1ydo_A HMG-COA lyase; TIM-barr 79.2 33 0.0011 34.6 14.5 157 264-429 24-199 (307)
89 4g9p_A 4-hydroxy-3-methylbut-2 79.0 4.6 0.00016 42.8 8.0 154 270-430 41-223 (406)
90 2cw6_A Hydroxymethylglutaryl-C 78.9 19 0.00066 36.0 12.5 161 264-429 23-198 (298)
91 4e38_A Keto-hydroxyglutarate-a 78.7 5.9 0.0002 38.9 8.3 101 274-406 53-154 (232)
92 3g8r_A Probable spore coat pol 77.7 20 0.00069 37.3 12.4 96 292-415 77-174 (350)
93 1mzh_A Deoxyribose-phosphate a 77.3 34 0.0012 32.8 13.3 144 263-425 15-171 (225)
94 1n7k_A Deoxyribose-phosphate a 77.0 21 0.00072 35.0 11.8 141 263-427 31-192 (234)
95 3vnd_A TSA, tryptophan synthas 76.7 7.9 0.00027 38.7 8.8 136 269-425 34-201 (267)
96 1geq_A Tryptophan synthase alp 76.6 51 0.0018 31.4 14.4 120 270-406 98-220 (248)
97 3nvt_A 3-deoxy-D-arabino-heptu 76.2 20 0.00067 37.8 12.0 112 271-406 160-283 (385)
98 1q6o_A Humps, 3-keto-L-gulonat 76.2 17 0.00057 34.4 10.6 137 275-428 75-213 (216)
99 1nvm_A HOA, 4-hydroxy-2-oxoval 75.8 62 0.0021 33.0 15.6 150 264-429 26-191 (345)
100 3m47_A Orotidine 5'-phosphate 75.2 25 0.00086 33.9 11.7 129 274-427 85-223 (228)
101 1vcv_A Probable deoxyribose-ph 74.9 4 0.00014 39.9 5.9 150 263-431 12-183 (226)
102 2tps_A Protein (thiamin phosph 74.3 32 0.0011 32.2 12.1 127 274-429 88-223 (227)
103 3tsm_A IGPS, indole-3-glycerol 73.4 29 0.001 34.7 12.0 128 272-423 134-266 (272)
104 1ypf_A GMP reductase; GUAC, pu 72.4 36 0.0012 34.6 12.7 123 267-406 105-239 (336)
105 1zco_A 2-dehydro-3-deoxyphosph 72.3 45 0.0015 33.0 12.9 124 270-417 40-177 (262)
106 3daq_A DHDPS, dihydrodipicolin 72.1 15 0.00052 36.8 9.6 97 271-371 27-134 (292)
107 3fkr_A L-2-keto-3-deoxyarabona 71.9 11 0.00037 38.3 8.5 100 271-371 33-143 (309)
108 1me8_A Inosine-5'-monophosphat 71.9 50 0.0017 35.6 14.3 121 270-406 244-381 (503)
109 3ewb_X 2-isopropylmalate synth 71.9 85 0.0029 31.4 15.9 195 264-478 23-234 (293)
110 3rmj_A 2-isopropylmalate synth 70.7 85 0.0029 32.6 15.2 159 264-430 30-200 (370)
111 2rdx_A Mandelate racemase/muco 70.7 98 0.0034 31.7 16.9 79 278-371 214-294 (379)
112 3exr_A RMPD (hexulose-6-phosph 70.7 40 0.0014 32.3 11.9 138 276-427 78-217 (221)
113 1vzw_A Phosphoribosyl isomeras 70.2 7.7 0.00026 37.2 6.7 125 272-414 37-174 (244)
114 2qr6_A IMP dehydrogenase/GMP r 70.2 29 0.00099 36.0 11.6 114 274-408 172-308 (393)
115 1yxy_A Putative N-acetylmannos 70.0 35 0.0012 32.3 11.3 132 269-425 90-231 (234)
116 1zfj_A Inosine monophosphate d 69.9 57 0.0019 34.7 14.1 123 267-406 232-365 (491)
117 2wqp_A Polysialic acid capsule 69.9 84 0.0029 32.5 14.8 119 270-416 38-188 (349)
118 1at0_A 17-hedgehog; developmen 69.9 12 0.0004 33.8 7.4 61 179-245 58-132 (145)
119 2v82_A 2-dehydro-3-deoxy-6-pho 69.9 37 0.0013 31.6 11.3 125 271-431 71-205 (212)
120 1thf_D HISF protein; thermophI 69.6 35 0.0012 32.5 11.3 133 269-422 85-241 (253)
121 3ngj_A Deoxyribose-phosphate a 68.7 14 0.00049 36.4 8.2 148 263-426 38-197 (239)
122 3b4u_A Dihydrodipicolinate syn 68.6 21 0.00071 35.8 9.7 98 271-371 28-139 (294)
123 2nv1_A Pyridoxal biosynthesis 68.5 30 0.001 34.6 10.9 125 271-426 32-171 (305)
124 3qze_A DHDPS, dihydrodipicolin 68.4 15 0.00051 37.3 8.7 97 271-371 48-155 (314)
125 3m5v_A DHDPS, dihydrodipicolin 68.3 35 0.0012 34.3 11.3 97 271-371 32-140 (301)
126 1ka9_F Imidazole glycerol phos 68.1 56 0.0019 31.0 12.4 133 270-422 87-242 (252)
127 1ub3_A Aldolase protein; schif 67.8 9.1 0.00031 37.2 6.6 144 263-426 14-173 (220)
128 1jub_A Dihydroorotate dehydrog 67.4 62 0.0021 32.1 13.0 126 267-406 105-271 (311)
129 4fxs_A Inosine-5'-monophosphat 67.1 9.2 0.00032 41.4 7.1 50 100-149 219-268 (496)
130 3e96_A Dihydrodipicolinate syn 66.5 19 0.00066 36.5 9.1 97 271-371 37-143 (316)
131 3r12_A Deoxyribose-phosphate a 66.4 15 0.00052 36.6 8.0 146 263-426 54-213 (260)
132 3hgj_A Chromate reductase; TIM 66.1 52 0.0018 33.7 12.4 131 264-406 141-318 (349)
133 3l21_A DHDPS, dihydrodipicolin 66.0 34 0.0012 34.5 10.7 97 271-371 40-147 (304)
134 1f6k_A N-acetylneuraminate lya 65.9 53 0.0018 32.7 12.1 97 271-371 28-136 (293)
135 3kws_A Putative sugar isomeras 65.8 50 0.0017 31.7 11.7 100 271-370 42-164 (287)
136 1rpx_A Protein (ribulose-phosp 65.1 35 0.0012 32.3 10.2 112 270-406 26-147 (230)
137 1wa3_A 2-keto-3-deoxy-6-phosph 65.0 59 0.002 30.0 11.5 124 271-428 74-202 (205)
138 2gou_A Oxidoreductase, FMN-bin 64.9 61 0.0021 33.5 12.7 121 264-407 150-323 (365)
139 3o63_A Probable thiamine-phosp 64.6 29 0.00099 34.0 9.6 126 276-429 108-242 (243)
140 3zwt_A Dihydroorotate dehydrog 64.6 1.2E+02 0.0042 31.3 14.9 89 307-407 219-328 (367)
141 3s5o_A 4-hydroxy-2-oxoglutarat 64.4 20 0.00068 36.2 8.6 98 271-371 39-148 (307)
142 1wa3_A 2-keto-3-deoxy-6-phosph 64.4 32 0.0011 31.8 9.6 107 266-406 20-131 (205)
143 3si9_A DHDPS, dihydrodipicolin 64.4 34 0.0012 34.7 10.5 97 271-371 47-154 (315)
144 2wkj_A N-acetylneuraminate lya 64.1 32 0.0011 34.6 10.1 97 271-371 36-144 (303)
145 2ehh_A DHDPS, dihydrodipicolin 63.8 63 0.0022 32.2 12.2 97 271-371 25-132 (294)
146 2k8i_A SLYD, peptidyl-prolyl C 63.0 26 0.00089 32.5 8.5 61 179-239 50-119 (171)
147 3dwg_A Cysteine synthase B; su 63.0 61 0.0021 32.6 12.0 122 353-498 84-214 (325)
148 3d0c_A Dihydrodipicolinate syn 62.8 44 0.0015 33.8 10.9 97 271-371 37-143 (314)
149 2v9d_A YAGE; dihydrodipicolini 62.6 42 0.0014 34.5 10.8 97 271-371 56-163 (343)
150 3glc_A Aldolase LSRF; TIM barr 62.5 1.2E+02 0.0041 30.5 14.0 132 273-428 131-279 (295)
151 3na8_A Putative dihydrodipicol 62.4 43 0.0015 33.9 10.8 97 271-371 49-156 (315)
152 4fo4_A Inosine 5'-monophosphat 62.4 14 0.00048 38.6 7.2 48 102-149 98-145 (366)
153 3cpr_A Dihydrodipicolinate syn 62.4 72 0.0025 32.0 12.3 97 271-371 41-148 (304)
154 1vyr_A Pentaerythritol tetrani 62.3 85 0.0029 32.3 13.2 124 264-407 150-324 (364)
155 3vnd_A TSA, tryptophan synthas 62.2 38 0.0013 33.7 10.0 117 272-406 115-235 (267)
156 1tv5_A Dhodehase, dihydroorota 62.1 99 0.0034 33.0 13.9 88 308-407 296-403 (443)
157 3flu_A DHDPS, dihydrodipicolin 62.0 55 0.0019 32.7 11.4 97 271-371 32-139 (297)
158 2r8w_A AGR_C_1641P; APC7498, d 62.0 66 0.0023 32.8 12.1 97 271-371 59-166 (332)
159 3qfe_A Putative dihydrodipicol 61.9 23 0.0008 35.9 8.7 98 271-371 36-145 (318)
160 3f4w_A Putative hexulose 6 pho 61.7 85 0.0029 29.0 12.0 113 270-406 16-134 (211)
161 3tak_A DHDPS, dihydrodipicolin 61.6 24 0.00082 35.2 8.6 96 271-371 26-133 (291)
162 3lab_A Putative KDPG (2-keto-3 61.6 36 0.0012 33.0 9.4 110 266-407 23-140 (217)
163 1vc4_A Indole-3-glycerol phosp 61.5 32 0.0011 33.8 9.3 129 272-422 120-252 (254)
164 3cqj_A L-ribulose-5-phosphate 61.2 43 0.0015 32.4 10.2 40 271-310 34-83 (295)
165 2yxg_A DHDPS, dihydrodipicolin 61.0 67 0.0023 31.9 11.8 97 271-371 25-132 (289)
166 3oa3_A Aldolase; structural ge 60.7 17 0.00059 36.8 7.2 147 263-428 69-230 (288)
167 3vav_A 3-methyl-2-oxobutanoate 60.5 85 0.0029 31.5 12.2 147 262-430 31-208 (275)
168 1xky_A Dihydrodipicolinate syn 60.3 60 0.0021 32.5 11.3 97 271-371 37-144 (301)
169 1wv2_A Thiazole moeity, thiazo 60.2 1.4E+02 0.0049 29.8 16.0 142 266-428 85-238 (265)
170 3q58_A N-acetylmannosamine-6-p 60.0 1.2E+02 0.004 29.2 12.9 112 265-405 33-155 (229)
171 1h5y_A HISF; histidine biosynt 59.9 89 0.003 29.2 12.0 132 271-422 90-244 (253)
172 2cu0_A Inosine-5'-monophosphat 59.8 90 0.0031 33.3 13.2 119 270-407 230-358 (486)
173 4h3d_A 3-dehydroquinate dehydr 59.6 88 0.003 30.7 12.2 153 256-425 20-192 (258)
174 2rfg_A Dihydrodipicolinate syn 59.5 61 0.0021 32.4 11.2 97 271-371 25-132 (297)
175 3khj_A Inosine-5-monophosphate 58.9 14 0.00048 38.4 6.5 45 103-149 98-142 (361)
176 1vzw_A Phosphoribosyl isomeras 58.7 48 0.0017 31.5 9.9 132 270-422 87-239 (244)
177 1ve1_A O-acetylserine sulfhydr 58.7 78 0.0027 31.3 11.8 119 356-499 76-204 (304)
178 3nav_A Tryptophan synthase alp 58.7 54 0.0018 32.7 10.5 116 272-406 117-237 (271)
179 3o1n_A 3-dehydroquinate dehydr 58.6 80 0.0027 31.5 11.7 147 265-428 116-275 (276)
180 1rd5_A Tryptophan synthase alp 58.5 97 0.0033 29.9 12.2 91 269-370 34-148 (262)
181 1eep_A Inosine 5'-monophosphat 58.3 14 0.00048 38.6 6.4 51 100-150 141-191 (404)
182 1ep3_A Dihydroorotate dehydrog 57.9 1.4E+02 0.0049 29.1 13.6 125 268-408 111-272 (311)
183 2czd_A Orotidine 5'-phosphate 57.9 64 0.0022 30.1 10.5 127 271-426 69-205 (208)
184 3i65_A Dihydroorotate dehydrog 57.6 1.6E+02 0.0055 31.1 14.4 87 308-406 268-374 (415)
185 1o5k_A DHDPS, dihydrodipicolin 56.9 70 0.0024 32.1 11.1 97 271-371 37-144 (306)
186 3dz1_A Dihydrodipicolinate syn 56.7 83 0.0028 31.7 11.7 95 271-371 33-140 (313)
187 1z41_A YQJM, probable NADH-dep 56.6 1.3E+02 0.0044 30.4 13.2 128 264-406 133-307 (338)
188 2h6r_A Triosephosphate isomera 56.6 15 0.00052 35.2 5.8 131 274-423 76-216 (219)
189 3l5l_A Xenobiotic reductase A; 56.4 64 0.0022 33.2 11.0 131 264-406 147-325 (363)
190 2vc6_A MOSA, dihydrodipicolina 56.2 72 0.0025 31.7 11.0 97 271-371 25-132 (292)
191 2gn0_A Threonine dehydratase c 56.1 1E+02 0.0035 31.2 12.3 119 355-498 101-225 (342)
192 3ovp_A Ribulose-phosphate 3-ep 55.7 1.1E+02 0.0039 29.3 12.0 116 271-413 21-149 (228)
193 3nav_A Tryptophan synthase alp 55.5 69 0.0024 31.9 10.7 138 269-427 36-205 (271)
194 1qpo_A Quinolinate acid phosph 55.5 26 0.00088 35.3 7.5 64 270-338 204-270 (284)
195 3eb2_A Putative dihydrodipicol 55.4 41 0.0014 33.8 9.1 97 271-371 29-136 (300)
196 3iwp_A Copper homeostasis prot 55.3 1.3E+02 0.0044 30.4 12.5 142 268-431 47-208 (287)
197 2w6r_A Imidazole glycerol phos 55.3 67 0.0023 30.9 10.4 129 269-415 85-238 (266)
198 3l6b_A Serine racemase; pyrido 55.2 1.1E+02 0.0036 31.2 12.3 120 355-499 89-214 (346)
199 2y88_A Phosphoribosyl isomeras 54.8 46 0.0016 31.5 9.0 125 270-414 86-233 (244)
200 2kfw_A FKBP-type peptidyl-prol 54.6 14 0.00048 35.3 5.1 60 179-238 50-118 (196)
201 2r14_A Morphinone reductase; H 54.6 1.1E+02 0.0036 31.8 12.3 121 264-406 155-328 (377)
202 2yr1_A 3-dehydroquinate dehydr 54.6 1.5E+02 0.005 29.1 12.8 121 271-406 36-176 (257)
203 3nbm_A PTS system, lactose-spe 54.5 9.2 0.00032 33.0 3.5 65 291-370 19-83 (108)
204 3usb_A Inosine-5'-monophosphat 54.5 17 0.00059 39.4 6.5 51 99-149 243-293 (511)
205 2v82_A 2-dehydro-3-deoxy-6-pho 54.4 35 0.0012 31.8 8.0 67 271-342 112-181 (212)
206 3cgm_A SLYD, peptidyl-prolyl C 53.9 58 0.002 29.7 9.1 60 180-239 46-115 (158)
207 3o1n_A 3-dehydroquinate dehydr 53.8 1.1E+02 0.0039 30.3 11.9 133 259-405 43-195 (276)
208 1o66_A 3-methyl-2-oxobutanoate 53.3 96 0.0033 31.1 11.2 129 265-405 22-180 (275)
209 3pc3_A CG1753, isoform A; CBS, 53.2 57 0.0019 35.1 10.4 127 355-499 126-259 (527)
210 3inp_A D-ribulose-phosphate 3- 52.9 82 0.0028 30.9 10.6 130 271-428 44-191 (246)
211 3igs_A N-acetylmannosamine-6-p 52.6 1.6E+02 0.0056 28.2 13.6 112 265-405 33-155 (232)
212 1jcn_A Inosine monophosphate d 52.6 18 0.0006 39.1 6.2 51 100-150 243-293 (514)
213 3ndz_A Endoglucanase D; cellot 52.1 16 0.00056 37.2 5.6 61 108-168 39-106 (345)
214 2ztj_A Homocitrate synthase; ( 51.4 2.2E+02 0.0076 29.4 16.9 155 264-428 21-185 (382)
215 3qja_A IGPS, indole-3-glycerol 51.3 69 0.0024 31.8 9.9 108 269-407 73-190 (272)
216 4avf_A Inosine-5'-monophosphat 51.2 22 0.00075 38.4 6.6 50 100-149 217-266 (490)
217 3dx5_A Uncharacterized protein 51.2 1E+02 0.0034 29.4 10.9 100 271-370 19-141 (286)
218 1y7l_A O-acetylserine sulfhydr 51.1 1.2E+02 0.0043 29.9 11.9 120 356-499 76-207 (316)
219 3i65_A Dihydroorotate dehydrog 51.1 28 0.00097 36.9 7.3 98 263-366 278-401 (415)
220 2ojp_A DHDPS, dihydrodipicolin 50.9 64 0.0022 32.1 9.6 97 271-371 26-133 (292)
221 2yr1_A 3-dehydroquinate dehydr 50.8 1.7E+02 0.0058 28.6 12.6 147 263-428 95-254 (257)
222 4dt4_A FKBP-type 16 kDa peptid 50.8 62 0.0021 30.0 8.8 60 180-239 74-143 (169)
223 3m5v_A DHDPS, dihydrodipicolin 50.8 61 0.0021 32.4 9.5 97 325-431 35-135 (301)
224 2y88_A Phosphoribosyl isomeras 50.4 32 0.0011 32.7 7.0 124 273-414 37-177 (244)
225 3ivs_A Homocitrate synthase, m 49.9 2.6E+02 0.0088 29.6 17.1 165 249-429 47-222 (423)
226 3noy_A 4-hydroxy-3-methylbut-2 49.8 2.4E+02 0.0084 29.3 13.8 139 270-428 49-202 (366)
227 1jub_A Dihydroorotate dehydrog 49.6 1.2E+02 0.0041 30.0 11.4 49 353-409 145-195 (311)
228 2qr6_A IMP dehydrogenase/GMP r 49.4 28 0.00096 36.1 6.9 70 271-344 223-313 (393)
229 2kr7_A FKBP-type peptidyl-prol 49.3 65 0.0022 29.0 8.6 60 180-239 56-124 (151)
230 2o55_A Putative glycerophospho 49.3 34 0.0012 33.1 7.2 58 354-427 201-258 (258)
231 1p5j_A L-serine dehydratase; l 48.9 1.1E+02 0.0036 31.6 11.2 119 356-498 107-233 (372)
232 3tbh_A O-acetyl serine sulfhyd 48.8 1E+02 0.0034 31.2 10.9 121 354-498 84-214 (334)
233 3h5d_A DHDPS, dihydrodipicolin 48.8 1E+02 0.0035 31.1 10.8 97 271-371 32-140 (311)
234 1yad_A Regulatory protein TENI 48.8 65 0.0022 30.2 8.9 85 271-365 121-216 (221)
235 3iwp_A Copper homeostasis prot 48.6 1.7E+02 0.0059 29.4 12.3 120 271-409 115-241 (287)
236 1xm3_A Thiazole biosynthesis p 48.5 1.9E+02 0.0063 28.2 12.5 94 322-431 138-232 (264)
237 1o4u_A Type II quinolic acid p 48.4 21 0.00072 36.0 5.6 65 269-338 202-269 (285)
238 1vhk_A Hypothetical protein YQ 48.4 1.1E+02 0.0037 30.3 10.7 121 211-337 36-175 (268)
239 3ndo_A Deoxyribose-phosphate a 48.1 32 0.0011 33.7 6.6 145 263-426 24-187 (231)
240 3icg_A Endoglucanase D; cellul 48.1 20 0.00067 38.7 5.7 58 111-168 45-109 (515)
241 2pqm_A Cysteine synthase; OASS 48.1 1.2E+02 0.0043 30.5 11.5 119 356-499 92-221 (343)
242 1tdj_A Biosynthetic threonine 48.0 2E+02 0.007 31.2 13.7 118 356-498 93-216 (514)
243 2a4a_A Deoxyribose-phosphate a 47.8 83 0.0028 31.6 9.8 149 263-429 43-215 (281)
244 1yx1_A Hypothetical protein PA 47.7 1E+02 0.0036 29.1 10.3 38 271-309 27-67 (264)
245 1z7w_A Cysteine synthase; tran 46.4 1.3E+02 0.0044 30.0 11.2 123 356-499 81-210 (322)
246 2q3b_A Cysteine synthase A; py 46.3 1.5E+02 0.005 29.3 11.5 120 356-499 81-210 (313)
247 2uva_G Fatty acid synthase bet 46.0 51 0.0017 41.9 9.5 121 270-406 656-795 (2060)
248 2z6i_A Trans-2-enoyl-ACP reduc 46.0 2.3E+02 0.0078 28.4 13.0 124 253-407 11-138 (332)
249 1qop_A Tryptophan synthase alp 45.7 2.2E+02 0.0075 27.7 12.5 91 270-370 34-152 (268)
250 3a5f_A Dihydrodipicolinate syn 45.5 68 0.0023 31.9 8.8 97 271-371 26-133 (291)
251 2v03_A Cysteine synthase B; py 45.3 1.5E+02 0.0052 29.2 11.4 121 356-499 75-203 (303)
252 1i60_A IOLI protein; beta barr 45.3 1.4E+02 0.0049 27.9 10.8 40 271-310 18-63 (278)
253 4aec_A Cysteine synthase, mito 45.1 1.2E+02 0.0042 32.1 11.2 124 355-499 188-318 (430)
254 1ko7_A HPR kinase/phosphatase; 44.6 23 0.00077 36.3 5.1 85 308-413 49-157 (314)
255 1qop_A Tryptophan synthase alp 44.5 97 0.0033 30.3 9.7 118 271-406 113-234 (268)
256 3ks6_A Glycerophosphoryl diest 44.1 53 0.0018 31.7 7.6 54 354-427 193-246 (250)
257 2ekc_A AQ_1548, tryptophan syn 44.0 94 0.0032 30.4 9.5 117 271-406 113-234 (262)
258 3gr7_A NADPH dehydrogenase; fl 44.0 2E+02 0.007 29.1 12.4 128 264-406 133-307 (340)
259 1vli_A Spore coat polysacchari 43.9 1.2E+02 0.004 31.9 10.6 70 324-416 127-199 (385)
260 3lmz_A Putative sugar isomeras 43.7 1.2E+02 0.0041 28.6 10.0 88 271-370 34-131 (257)
261 1tvn_A Cellulase, endoglucanas 43.6 39 0.0013 33.0 6.6 54 111-167 38-101 (293)
262 3tsm_A IGPS, indole-3-glycerol 43.6 38 0.0013 33.8 6.6 66 269-338 178-250 (272)
263 2gjl_A Hypothetical protein PA 43.5 2.6E+02 0.0088 27.8 14.0 121 261-410 22-149 (328)
264 1vr6_A Phospho-2-dehydro-3-deo 43.3 2.3E+02 0.008 29.2 12.6 111 271-405 124-246 (350)
265 2hmc_A AGR_L_411P, dihydrodipi 43.2 1.1E+02 0.0039 31.2 10.3 96 271-371 51-157 (344)
266 3zwt_A Dihydroorotate dehydrog 43.2 38 0.0013 35.2 6.7 98 263-365 229-353 (367)
267 1gox_A (S)-2-hydroxy-acid oxid 43.0 33 0.0011 35.5 6.2 64 271-338 237-310 (370)
268 1v71_A Serine racemase, hypoth 43.0 1.4E+02 0.0047 29.8 10.8 119 355-498 87-211 (323)
269 1m3u_A 3-methyl-2-oxobutanoate 42.9 1.1E+02 0.0039 30.3 9.8 147 263-430 20-196 (264)
270 1edg_A Endoglucanase A; family 42.6 26 0.0009 35.8 5.4 61 108-168 58-124 (380)
271 2r91_A 2-keto-3-deoxy-(6-phosp 42.4 2.3E+02 0.008 27.8 12.2 95 271-371 23-128 (286)
272 3q94_A Fructose-bisphosphate a 42.3 77 0.0026 31.9 8.6 106 306-415 78-188 (288)
273 3tva_A Xylose isomerase domain 42.2 2E+02 0.007 27.3 11.6 42 271-312 25-70 (290)
274 2nzl_A Hydroxyacid oxidase 1; 42.2 40 0.0014 35.3 6.7 66 270-339 263-338 (392)
275 4af0_A Inosine-5'-monophosphat 41.5 25 0.00087 38.7 5.2 51 99-149 268-318 (556)
276 3p6l_A Sugar phosphate isomera 41.5 2.3E+02 0.0077 26.6 12.8 88 271-370 26-133 (262)
277 2rkb_A Serine dehydratase-like 41.4 1.9E+02 0.0067 28.5 11.5 118 356-498 68-193 (318)
278 3flu_A DHDPS, dihydrodipicolin 41.3 1.4E+02 0.0046 29.8 10.3 158 325-504 35-201 (297)
279 3ngf_A AP endonuclease, family 41.3 83 0.0028 29.9 8.5 39 271-310 27-65 (269)
280 1kbi_A Cytochrome B2, L-LCR; f 41.3 1E+02 0.0034 33.5 9.9 94 292-407 332-433 (511)
281 2q02_A Putative cytoplasmic pr 41.2 2.3E+02 0.0077 26.5 12.8 39 271-309 23-67 (272)
282 1vc4_A Indole-3-glycerol phosp 40.9 57 0.002 32.0 7.3 66 269-338 163-237 (254)
283 1vrd_A Inosine-5'-monophosphat 40.9 36 0.0012 36.3 6.3 49 102-150 227-275 (494)
284 3sgz_A Hydroxyacid oxidase 2; 40.5 45 0.0015 34.6 6.7 67 271-341 229-305 (352)
285 1to3_A Putative aldolase YIHT; 40.5 62 0.0021 32.6 7.7 79 272-350 182-267 (304)
286 4h27_A L-serine dehydratase/L- 40.4 1.1E+02 0.0038 31.3 9.7 119 355-497 106-232 (364)
287 2isw_A Putative fructose-1,6-b 40.2 74 0.0025 32.7 8.1 116 307-429 74-203 (323)
288 2nli_A Lactate oxidase; flavoe 39.9 43 0.0015 34.7 6.5 65 270-338 240-314 (368)
289 3tha_A Tryptophan synthase alp 39.9 1.6E+02 0.0056 28.9 10.4 116 272-406 108-227 (252)
290 1mdl_A Mandelate racemase; iso 39.8 57 0.0019 33.1 7.4 82 278-371 214-297 (359)
291 3nl6_A Thiamine biosynthetic b 39.8 2.5E+02 0.0086 30.6 12.8 139 274-430 79-233 (540)
292 1jbq_A B, cystathionine beta-s 39.7 95 0.0032 32.9 9.3 126 356-499 175-307 (435)
293 4djd_D C/Fe-SP, corrinoid/iron 39.5 1.3E+02 0.0045 30.8 9.9 150 267-429 141-317 (323)
294 2e6f_A Dihydroorotate dehydrog 39.2 1.4E+02 0.0048 29.5 10.0 129 267-408 105-275 (314)
295 3ayr_A Endoglucanase; TIM barr 39.1 35 0.0012 34.9 5.7 57 111-167 62-125 (376)
296 3qze_A DHDPS, dihydrodipicolin 38.9 1.3E+02 0.0043 30.4 9.7 94 326-430 52-149 (314)
297 3iau_A Threonine deaminase; py 38.8 2.8E+02 0.0095 28.2 12.5 120 355-499 121-246 (366)
298 1egz_A Endoglucanase Z, EGZ, C 38.8 39 0.0013 32.9 5.7 53 112-167 39-99 (291)
299 1j0a_A 1-aminocyclopropane-1-c 38.7 1.1E+02 0.0036 30.6 9.1 125 354-497 84-217 (325)
300 1o58_A O-acetylserine sulfhydr 38.2 2E+02 0.0069 28.3 11.0 119 356-499 79-208 (303)
301 1vs1_A 3-deoxy-7-phosphoheptul 38.0 3.1E+02 0.011 27.2 13.8 125 271-419 56-194 (276)
302 1ve5_A Threonine deaminase; ri 38.0 1.5E+02 0.005 29.3 10.0 118 356-498 79-206 (311)
303 3ffs_A Inosine-5-monophosphate 38.0 30 0.001 36.5 5.0 43 105-149 139-181 (400)
304 3rcm_A TATD family hydrolase; 37.5 1.2E+02 0.0042 30.0 9.3 101 268-371 17-133 (287)
305 2g0w_A LMO2234 protein; putati 37.2 1.5E+02 0.0052 28.6 9.8 38 271-308 40-83 (296)
306 1rd5_A Tryptophan synthase alp 37.2 1.7E+02 0.0059 28.1 10.1 114 276-406 114-230 (262)
307 3kru_A NADH:flavin oxidoreduct 37.2 2.3E+02 0.008 28.8 11.5 129 264-406 132-307 (343)
308 2wkj_A N-acetylneuraminate lya 37.2 1.7E+02 0.0059 29.1 10.4 95 325-430 39-137 (303)
309 2nuw_A 2-keto-3-deoxygluconate 37.1 3.1E+02 0.011 26.9 12.3 96 271-371 24-129 (288)
310 3kw2_A Probable R-RNA methyltr 37.1 1E+02 0.0036 30.2 8.5 116 211-336 32-165 (257)
311 2dpr_A CON-T(K7GLA); conantoxi 37.0 24 0.00082 22.4 2.4 17 137-153 2-18 (26)
312 2aam_A Hypothetical protein TM 36.9 1.5E+02 0.0053 29.9 9.9 93 273-371 128-246 (309)
313 2htm_A Thiazole biosynthesis p 36.9 65 0.0022 32.3 6.9 83 331-428 146-229 (268)
314 1h1n_A Endo type cellulase ENG 36.9 24 0.00084 34.9 3.9 21 113-133 33-53 (305)
315 1x1o_A Nicotinate-nucleotide p 36.7 55 0.0019 32.9 6.5 65 268-338 204-269 (286)
316 2d73_A Alpha-glucosidase SUSB; 36.7 1.9E+02 0.0066 32.9 11.5 101 266-370 370-506 (738)
317 4adt_A Pyridoxine biosynthetic 36.7 1.3E+02 0.0044 30.3 9.3 59 361-430 203-262 (297)
318 1xky_A Dihydrodipicolinate syn 36.6 1.6E+02 0.0055 29.3 10.0 95 325-430 40-138 (301)
319 3l55_A B-1,4-endoglucanase/cel 36.5 57 0.0019 33.5 6.7 58 108-168 49-114 (353)
320 3bdk_A D-mannonate dehydratase 36.2 1.4E+02 0.0047 31.2 9.7 65 266-330 29-112 (386)
321 2ehh_A DHDPS, dihydrodipicolin 36.2 1.5E+02 0.0052 29.3 9.7 95 325-430 28-126 (294)
322 2egu_A Cysteine synthase; O-ac 36.1 1.7E+02 0.0057 28.9 10.0 122 356-499 79-207 (308)
323 3m9b_A Proteasome-associated A 36.0 1.2E+02 0.004 30.2 8.4 25 165-189 117-143 (251)
324 1h5y_A HISF; histidine biosynt 35.8 81 0.0028 29.5 7.3 86 271-368 158-251 (253)
325 2nli_A Lactate oxidase; flavoe 35.5 1.4E+02 0.0047 30.9 9.5 96 291-407 217-314 (368)
326 3ih1_A Methylisocitrate lyase; 35.4 1.2E+02 0.004 30.8 8.7 79 306-405 157-242 (305)
327 2r8w_A AGR_C_1641P; APC7498, d 35.2 1.7E+02 0.0058 29.7 10.0 95 325-430 62-160 (332)
328 4dpp_A DHDPS 2, dihydrodipicol 35.2 72 0.0025 33.1 7.3 95 271-371 84-189 (360)
329 1oy0_A Ketopantoate hydroxymet 35.1 2.7E+02 0.0094 27.8 11.3 129 265-405 39-198 (281)
330 3cpr_A Dihydrodipicolinate syn 34.7 1.9E+02 0.0065 28.9 10.2 95 325-430 44-142 (304)
331 4eiv_A Deoxyribose-phosphate a 34.6 1.3E+02 0.0043 30.6 8.7 154 263-429 37-209 (297)
332 1jw9_B Molybdopterin biosynthe 34.6 1.4E+02 0.005 28.6 9.0 66 295-371 87-152 (249)
333 2b7n_A Probable nicotinate-nuc 34.6 70 0.0024 31.7 6.8 64 270-338 192-258 (273)
334 3b0p_A TRNA-dihydrouridine syn 34.6 2.2E+02 0.0075 28.9 10.8 121 271-406 74-225 (350)
335 2fli_A Ribulose-phosphate 3-ep 34.6 2.4E+02 0.0082 25.9 10.3 87 270-371 19-115 (220)
336 1f6k_A N-acetylneuraminate lya 34.2 1.6E+02 0.0056 29.1 9.6 97 324-431 30-131 (293)
337 4ef8_A Dihydroorotate dehydrog 34.1 2.7E+02 0.0093 28.6 11.4 116 278-406 153-306 (354)
338 2yxg_A DHDPS, dihydrodipicolin 34.1 1.9E+02 0.0065 28.6 10.0 95 325-430 28-126 (289)
339 3daq_A DHDPS, dihydrodipicolin 33.7 2.2E+02 0.0075 28.2 10.4 96 325-431 30-129 (292)
340 1v8a_A Hydroxyethylthiazole ki 33.6 46 0.0016 32.7 5.3 47 320-371 46-92 (265)
341 3h8v_A Ubiquitin-like modifier 33.6 1.2E+02 0.0043 30.3 8.6 66 296-371 92-168 (292)
342 2yci_X 5-methyltetrahydrofolat 33.4 50 0.0017 32.9 5.5 52 116-170 39-90 (271)
343 1w3i_A EDA, 2-keto-3-deoxy glu 33.3 3.6E+02 0.012 26.5 12.3 95 271-371 24-129 (293)
344 3bo9_A Putative nitroalkan dio 33.3 3.8E+02 0.013 26.8 14.5 146 250-428 22-174 (326)
345 2ovl_A Putative racemase; stru 33.2 61 0.0021 33.1 6.4 56 308-371 242-299 (371)
346 3cny_A Inositol catabolism pro 33.1 85 0.0029 30.0 7.1 98 271-370 35-159 (301)
347 2gdq_A YITF; mandelate racemas 33.0 1E+02 0.0035 31.6 8.1 47 116-166 146-192 (382)
348 1rvk_A Isomerase/lactonizing e 33.0 90 0.0031 31.9 7.6 60 308-377 251-313 (382)
349 1zud_1 Adenylyltransferase THI 32.9 1.7E+02 0.0058 28.2 9.2 66 295-371 84-149 (251)
350 3tak_A DHDPS, dihydrodipicolin 32.8 2.2E+02 0.0076 28.0 10.3 95 325-430 29-127 (291)
351 1to3_A Putative aldolase YIHT; 32.6 3.9E+02 0.013 26.7 14.3 86 331-431 191-291 (304)
352 1rqb_A Transcarboxylase 5S sub 32.5 5.2E+02 0.018 28.1 15.2 152 264-429 43-217 (539)
353 1thf_D HISF protein; thermophI 32.4 1.4E+02 0.0047 28.2 8.4 65 273-342 36-108 (253)
354 1tv5_A Dhodehase, dihydroorota 32.4 61 0.0021 34.6 6.3 54 101-154 180-248 (443)
355 1nu5_A Chloromuconate cycloiso 32.4 82 0.0028 32.1 7.2 82 278-371 213-296 (370)
356 2kct_A Cytochrome C-type bioge 32.4 1E+02 0.0035 25.9 6.5 55 166-220 7-65 (94)
357 3l21_A DHDPS, dihydrodipicolin 32.3 1.5E+02 0.0052 29.6 9.0 95 325-430 43-141 (304)
358 1pii_A N-(5'phosphoribosyl)ant 32.3 1.1E+02 0.0039 32.7 8.4 110 268-403 165-279 (452)
359 3dz1_A Dihydrodipicolinate syn 32.1 1.7E+02 0.0057 29.4 9.3 93 325-430 36-132 (313)
360 3qvq_A Phosphodiesterase OLEI0 32.0 78 0.0027 30.5 6.6 103 282-424 145-249 (252)
361 3jr2_A Hexulose-6-phosphate sy 31.9 2.4E+02 0.0082 26.3 9.9 132 270-426 22-163 (218)
362 3qc0_A Sugar isomerase; TIM ba 31.9 1E+02 0.0035 28.9 7.4 122 271-397 22-169 (275)
363 1kzl_A Riboflavin synthase; bi 31.8 79 0.0027 30.4 6.4 54 201-256 25-85 (208)
364 1ujp_A Tryptophan synthase alp 31.8 1.3E+02 0.0045 29.7 8.3 117 272-406 111-229 (271)
365 3r2g_A Inosine 5'-monophosphat 31.6 42 0.0014 34.9 4.8 45 106-150 94-138 (361)
366 3n9r_A Fructose-bisphosphate a 31.5 2.5E+02 0.0086 28.5 10.4 114 306-425 72-199 (307)
367 2bti_A Carbon storage regulato 31.4 79 0.0027 24.8 5.1 31 212-243 8-38 (63)
368 1k77_A EC1530, hypothetical pr 31.1 2.4E+02 0.0083 26.1 9.9 39 271-310 19-57 (260)
369 3dzv_A 4-methyl-5-(beta-hydrox 31.1 57 0.002 32.5 5.5 53 309-371 42-94 (273)
370 1qo2_A Molecule: N-((5-phospho 31.0 2.8E+02 0.0096 26.0 10.3 130 269-419 84-236 (241)
371 2v9d_A YAGE; dihydrodipicolini 31.0 1.8E+02 0.0061 29.7 9.4 95 325-430 59-157 (343)
372 3sz8_A 2-dehydro-3-deoxyphosph 30.9 1.9E+02 0.0065 29.0 9.3 94 293-410 78-172 (285)
373 4dbe_A Orotidine 5'-phosphate 30.9 52 0.0018 31.7 5.0 83 270-358 125-208 (222)
374 3lye_A Oxaloacetate acetyl hyd 30.8 2.7E+02 0.0091 28.2 10.5 105 298-429 152-265 (307)
375 1i8d_A Riboflavin synthase; ri 30.7 99 0.0034 29.9 6.9 48 207-256 31-85 (213)
376 2ojp_A DHDPS, dihydrodipicolin 30.6 1.4E+02 0.0047 29.6 8.3 95 325-430 29-127 (292)
377 2rfg_A Dihydrodipicolinate syn 30.6 1.7E+02 0.0058 29.1 9.0 95 325-430 28-126 (297)
378 3kts_A Glycerol uptake operon 30.5 90 0.0031 29.6 6.5 129 268-431 17-151 (192)
379 1tzz_A Hypothetical protein L1 30.4 90 0.0031 32.1 7.1 63 100-166 150-218 (392)
380 1vpz_A Carbon storage regulato 30.3 70 0.0024 25.9 4.8 33 209-242 15-47 (73)
381 3fij_A LIN1909 protein; 11172J 30.3 1.1E+02 0.0038 29.5 7.4 64 302-369 37-112 (254)
382 1o5k_A DHDPS, dihydrodipicolin 30.2 1.7E+02 0.0057 29.3 8.9 95 325-430 40-138 (306)
383 1tkk_A Similar to chloromucona 30.1 1.1E+02 0.0036 31.2 7.5 45 117-165 148-192 (366)
384 1sfl_A 3-dehydroquinate dehydr 29.9 3.8E+02 0.013 25.7 11.9 124 271-406 21-162 (238)
385 3l12_A Putative glycerophospho 29.8 1.7E+02 0.0058 29.0 8.9 51 354-424 257-307 (313)
386 2jpp_A Translational repressor 29.6 74 0.0025 25.5 4.8 30 212-242 6-35 (70)
387 1aj0_A DHPS, dihydropteroate s 29.6 94 0.0032 31.1 6.8 68 100-170 14-102 (282)
388 1o60_A 2-dehydro-3-deoxyphosph 29.4 3.1E+02 0.01 27.5 10.6 87 295-405 78-165 (292)
389 1nsj_A PRAI, phosphoribosyl an 29.4 1.2E+02 0.0041 28.7 7.3 68 269-337 11-83 (205)
390 2jep_A Xyloglucanase; family 5 29.3 61 0.0021 33.1 5.6 57 112-168 70-133 (395)
391 2qul_A D-tagatose 3-epimerase; 29.2 2.1E+02 0.0072 27.0 9.2 42 271-312 21-66 (290)
392 2oog_A Glycerophosphoryl diest 29.2 3.7E+02 0.013 26.1 11.2 104 282-423 172-279 (287)
393 4adt_A Pyridoxine biosynthetic 29.2 2.2E+02 0.0076 28.6 9.6 121 274-429 35-174 (297)
394 3b4u_A Dihydrodipicolinate syn 29.0 1.6E+02 0.0055 29.2 8.5 91 325-429 31-129 (294)
395 4dwd_A Mandelate racemase/muco 28.6 1.7E+02 0.0057 30.4 8.8 63 100-166 125-199 (393)
396 2zbt_A Pyridoxal biosynthesis 28.6 1.7E+02 0.0057 28.7 8.5 140 270-427 90-259 (297)
397 2vc6_A MOSA, dihydrodipicolina 28.5 1.7E+02 0.0059 28.9 8.6 159 325-504 28-195 (292)
398 3s1x_A Probable transaldolase; 28.5 90 0.0031 30.3 6.2 62 274-341 119-192 (223)
399 3apt_A Methylenetetrahydrofola 28.4 94 0.0032 31.4 6.6 63 267-329 160-222 (310)
400 1p0k_A Isopentenyl-diphosphate 28.4 87 0.003 31.7 6.5 65 269-338 191-281 (349)
401 2nzl_A Hydroxyacid oxidase 1; 28.4 1.7E+02 0.0058 30.5 8.8 94 292-407 241-337 (392)
402 1v5x_A PRA isomerase, phosphor 28.4 1.3E+02 0.0044 28.5 7.2 68 269-337 10-82 (203)
403 2jbm_A Nicotinate-nucleotide p 28.3 93 0.0032 31.3 6.6 63 271-338 208-273 (299)
404 4e8b_A Ribosomal RNA small sub 28.2 1.2E+02 0.0041 29.6 7.2 113 211-330 33-162 (251)
405 3ijd_A Uncharacterized protein 28.2 1E+02 0.0034 31.5 6.8 101 268-371 166-280 (315)
406 2zbt_A Pyridoxal biosynthesis 28.1 1.4E+02 0.0047 29.4 7.7 124 271-427 32-172 (297)
407 3si9_A DHDPS, dihydrodipicolin 27.7 2.2E+02 0.0076 28.6 9.3 159 325-504 50-217 (315)
408 2qiw_A PEP phosphonomutase; st 27.6 3E+02 0.01 26.9 10.0 138 264-405 24-187 (255)
409 1rvg_A Fructose-1,6-bisphospha 27.6 3.2E+02 0.011 27.6 10.4 117 293-415 59-182 (305)
410 1kbi_A Cytochrome B2, L-LCR; f 27.6 88 0.003 33.9 6.7 66 270-339 354-434 (511)
411 2p10_A MLL9387 protein; putati 27.5 91 0.0031 31.5 6.2 71 326-406 178-259 (286)
412 3hpd_A Hydroxyethylthiazole ki 27.5 65 0.0022 32.0 5.1 47 319-370 45-91 (265)
413 3ceu_A Thiamine phosphate pyro 27.4 1.2E+02 0.0041 28.3 6.8 68 269-341 97-176 (210)
414 1tqj_A Ribulose-phosphate 3-ep 27.4 2E+02 0.0069 27.3 8.6 135 271-430 21-168 (230)
415 3nco_A Endoglucanase fncel5A; 27.2 1.2E+02 0.004 29.9 7.1 22 112-133 42-63 (320)
416 3ddy_A Lumazine protein, LUMP; 26.8 1.6E+02 0.0054 27.7 7.5 54 200-256 23-84 (186)
417 3sgz_A Hydroxyacid oxidase 2; 26.8 3.6E+02 0.012 27.7 10.9 95 291-406 205-301 (352)
418 1zco_A 2-dehydro-3-deoxyphosph 26.8 1E+02 0.0035 30.4 6.4 127 260-405 86-226 (262)
419 3stp_A Galactonate dehydratase 26.8 92 0.0032 32.6 6.5 55 308-370 281-337 (412)
420 3gka_A N-ethylmaleimide reduct 26.7 4.6E+02 0.016 26.9 11.7 114 264-406 150-316 (361)
421 1zcc_A Glycerophosphodiester p 26.5 1.1E+02 0.0037 29.4 6.5 57 350-426 178-236 (248)
422 2oz8_A MLL7089 protein; struct 26.4 1.2E+02 0.004 31.3 7.1 63 100-166 132-198 (389)
423 3ctl_A D-allulose-6-phosphate 26.4 4.3E+02 0.015 25.2 11.2 129 271-427 17-162 (231)
424 1y8q_A Ubiquitin-like 1 activa 26.3 1.7E+02 0.0058 29.8 8.2 65 295-371 92-156 (346)
425 1ypf_A GMP reductase; GUAC, pu 26.2 59 0.002 33.0 4.7 46 105-150 99-146 (336)
426 1icp_A OPR1, 12-oxophytodienoa 25.9 2.7E+02 0.0093 28.6 9.8 121 265-405 157-329 (376)
427 4a29_A Engineered retro-aldol 25.9 86 0.0029 31.2 5.6 63 268-337 161-233 (258)
428 2v5j_A 2,4-dihydroxyhept-2-ENE 25.7 3.5E+02 0.012 26.7 10.3 87 298-406 30-118 (287)
429 2cks_A Endoglucanase E-5; carb 25.7 1E+02 0.0035 30.2 6.3 52 113-167 44-102 (306)
430 3r8r_A Transaldolase; pentose 25.6 77 0.0026 30.6 5.1 58 275-338 118-187 (212)
431 1zzm_A Putative deoxyribonucle 25.5 3.1E+02 0.01 25.7 9.5 98 271-372 23-134 (259)
432 3sr7_A Isopentenyl-diphosphate 25.4 1.7E+02 0.0059 30.2 8.2 90 293-405 196-306 (365)
433 3fst_A 5,10-methylenetetrahydr 25.4 1.4E+02 0.0049 30.1 7.3 62 267-328 163-224 (304)
434 3na8_A Putative dihydrodipicol 25.2 2.2E+02 0.0076 28.6 8.8 153 325-497 52-213 (315)
435 2nx9_A Oxaloacetate decarboxyl 25.1 6.4E+02 0.022 26.8 17.0 152 264-429 26-200 (464)
436 1z85_A Hypothetical protein TM 24.9 1.5E+02 0.0051 28.8 7.1 72 211-286 40-116 (234)
437 2qdd_A Mandelate racemase/muco 24.9 1.3E+02 0.0045 30.7 7.1 60 100-165 134-197 (378)
438 3k30_A Histamine dehydrogenase 24.8 2.2E+02 0.0075 31.5 9.4 131 264-406 145-324 (690)
439 1ece_A Endocellulase E1; glyco 24.6 75 0.0026 31.7 5.1 20 114-133 47-66 (358)
440 1vhy_A Hypothetical protein HI 24.6 1.4E+02 0.0047 29.3 6.9 74 211-286 35-111 (257)
441 2qkf_A 3-deoxy-D-manno-octulos 24.5 5.2E+02 0.018 25.5 11.5 87 295-405 75-162 (280)
442 1o94_A Tmadh, trimethylamine d 24.3 5.5E+02 0.019 28.5 12.6 131 264-406 138-321 (729)
443 1muw_A Xylose isomerase; atomi 24.3 3.8E+02 0.013 27.1 10.5 146 271-421 37-233 (386)
444 4h3d_A 3-dehydroquinate dehydr 24.2 5E+02 0.017 25.2 12.0 145 265-428 96-255 (258)
445 3d0c_A Dihydrodipicolinate syn 24.1 1.8E+02 0.006 29.3 7.8 94 325-430 40-137 (314)
446 4d9b_A D-cysteine desulfhydras 24.0 3.7E+02 0.013 26.9 10.2 159 309-498 47-236 (342)
447 2zds_A Putative DNA-binding pr 24.0 2.1E+02 0.0071 27.8 8.2 40 271-310 19-68 (340)
448 3pr9_A FKBP-type peptidyl-prol 24.0 1.1E+02 0.0037 27.9 5.6 59 179-239 62-128 (157)
449 2e6z_A Transcription elongatio 23.9 64 0.0022 24.6 3.4 36 211-246 7-45 (59)
450 1bqc_A Protein (beta-mannanase 23.9 1E+02 0.0034 30.1 5.8 46 115-167 36-87 (302)
451 3fs2_A 2-dehydro-3-deoxyphosph 23.7 2.6E+02 0.0088 28.3 8.8 93 293-409 99-192 (298)
452 3fkr_A L-2-keto-3-deoxyarabona 23.6 3.2E+02 0.011 27.2 9.6 95 325-431 36-138 (309)
453 3u7r_A NADPH-dependent FMN red 23.6 1.3E+02 0.0045 28.0 6.3 51 316-371 53-110 (190)
454 3sjn_A Mandelate racemase/muco 23.4 1.4E+02 0.0048 30.6 7.0 55 308-370 245-301 (374)
455 1ceo_A Cellulase CELC; glycosy 23.4 1.2E+02 0.0042 29.9 6.4 22 112-133 29-50 (343)
456 1xg4_A Probable methylisocitra 23.3 1.7E+02 0.0058 29.4 7.4 103 270-392 170-275 (295)
457 2whl_A Beta-mannanase, baman5; 23.1 93 0.0032 30.3 5.4 52 113-168 33-87 (294)
458 3f2b_A DNA-directed DNA polyme 23.0 4.1E+02 0.014 31.5 11.4 124 271-399 136-350 (1041)
459 3hgm_A Universal stress protei 22.9 86 0.0029 26.3 4.5 41 449-494 97-147 (147)
460 3aof_A Endoglucanase; glycosyl 22.7 1.2E+02 0.0041 29.6 6.1 21 113-133 35-55 (317)
461 1ix5_A FKBP; ppiase, isomerase 22.6 53 0.0018 29.6 3.1 59 179-239 63-129 (151)
462 2pgw_A Muconate cycloisomerase 22.5 2.6E+02 0.0087 28.5 8.8 86 274-371 211-298 (384)
463 1g01_A Endoglucanase; alpha/be 22.4 1.1E+02 0.0036 31.1 5.8 52 113-168 55-113 (364)
464 3tml_A 2-dehydro-3-deoxyphosph 22.3 5.3E+02 0.018 25.7 10.8 108 278-409 46-174 (288)
465 3pm6_A Putative fructose-bisph 22.2 5E+02 0.017 26.3 10.6 119 307-429 81-218 (306)
466 2e6f_A Dihydroorotate dehydrog 22.2 5.5E+02 0.019 25.0 13.2 48 354-409 148-198 (314)
467 2og9_A Mandelate racemase/muco 22.2 1.3E+02 0.0043 31.1 6.4 62 100-165 148-214 (393)
468 2z08_A Universal stress protei 22.0 1.3E+02 0.0045 25.0 5.5 41 449-494 86-136 (137)
469 2h9a_A Carbon monoxide dehydro 21.9 3.2E+02 0.011 29.1 9.5 53 97-150 88-153 (445)
470 3tnj_A Universal stress protei 21.8 1.1E+02 0.0038 25.9 5.0 44 449-497 96-148 (150)
471 3no3_A Glycerophosphodiester p 21.7 1.3E+02 0.0044 28.7 6.0 50 355-424 186-235 (238)
472 3vc3_A Beta-cyanoalnine syntha 21.6 6.2E+02 0.021 25.4 11.7 119 356-498 101-229 (344)
473 3glc_A Aldolase LSRF; TIM barr 21.5 4.4E+02 0.015 26.3 10.1 154 319-495 70-230 (295)
474 1ep3_A Dihydroorotate dehydrog 21.5 1.6E+02 0.0053 28.8 6.7 53 308-366 241-296 (311)
475 1ivn_A Thioesterase I; hydrola 21.4 99 0.0034 27.3 4.8 42 331-372 63-106 (190)
476 2egv_A UPF0088 protein AQ_165; 21.4 1.2E+02 0.0042 29.1 5.7 69 211-285 28-102 (229)
477 3l23_A Sugar phosphate isomera 21.3 1.8E+02 0.0062 28.3 7.1 100 271-370 33-164 (303)
478 3oru_A DUF1989 family protein; 21.2 1.3E+02 0.0043 29.5 5.7 55 178-232 46-114 (234)
479 3if2_A Aminotransferase; YP_26 21.2 1.4E+02 0.0048 30.2 6.5 51 103-154 368-440 (444)
480 1i4n_A Indole-3-glycerol phosp 21.1 1.2E+02 0.0039 29.9 5.5 67 268-338 158-231 (251)
481 7a3h_A Endoglucanase; hydrolas 21.0 1.1E+02 0.0036 30.2 5.3 53 111-167 43-102 (303)
482 3kts_A Glycerol uptake operon 21.0 2.4E+02 0.0081 26.7 7.4 79 309-406 10-89 (192)
483 2vef_A Dihydropteroate synthas 20.8 1.5E+02 0.0051 30.1 6.4 69 99-170 8-97 (314)
484 1tzj_A ACC deaminase, 1-aminoc 20.8 2.7E+02 0.0091 27.7 8.4 129 356-498 83-226 (338)
485 3g0t_A Putative aminotransfera 20.8 1.2E+02 0.0042 30.5 5.9 49 103-152 374-435 (437)
486 1h4p_A Glucan 1,3-beta-glucosi 20.8 1.2E+02 0.0041 31.6 5.9 21 113-133 75-95 (408)
487 3ve9_A Orotidine-5'-phosphate 20.7 61 0.0021 31.1 3.3 77 271-354 119-197 (215)
488 2osx_A Endoglycoceramidase II; 20.7 1.9E+02 0.0065 30.5 7.5 52 111-166 65-126 (481)
489 1vcf_A Isopentenyl-diphosphate 20.6 2.4E+02 0.0083 28.2 8.0 89 293-405 172-284 (332)
490 1bxb_A Xylose isomerase; xylos 20.3 6.3E+02 0.022 25.5 11.3 145 271-422 37-234 (387)
491 2yyu_A Orotidine 5'-phosphate 20.3 40 0.0014 32.7 1.9 35 392-426 201-235 (246)
492 1f2d_A 1-aminocyclopropane-1-c 20.1 3.7E+02 0.013 26.8 9.3 131 354-498 81-229 (341)
493 3vup_A Beta-1,4-mannanase; TIM 20.1 1.1E+02 0.0038 29.0 5.1 49 114-165 45-110 (351)
494 3n9k_A Glucan 1,3-beta-glucosi 20.1 95 0.0033 32.4 4.9 21 113-133 75-95 (399)
No 1
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=100.00 E-value=3.1e-135 Score=1108.50 Aligned_cols=484 Identities=37% Similarity=0.574 Sum_probs=456.9
Q ss_pred hhhhhccCCCCCCCCCCccCCCCCCCCceEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhh
Q 008319 74 SLSSIFELPNGQCTPGKGVVGPNARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQ 153 (570)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~r~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~ 153 (570)
.|+|++.|+. .++|..+|||||||||||+|+++|+|++|+++||||||||||||++|+|+++|+++|++.++
T Consensus 45 ~l~~~~~l~~--------~~~~~~~rkTKIV~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~a~~~ 116 (550)
T 3gr4_A 45 FLEHMCRLDI--------DSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATES 116 (550)
T ss_dssp HHHHHHTCCT--------TSCCCSCCCSEEEEECSTTTCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHhhccCC--------CCCCccCCCceEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHh
Confidence 4999999984 66778899999999999999999999999999999999999999999999999999999988
Q ss_pred ------cCCCcEEEEeecCCCeeeeccCCC----ceeecCCCEEEEEEecC---CCCccEEEeccCCcccccccCCEEEE
Q 008319 154 ------FEDKAVAIMLDTKGPEVRSGDVPQ----PIILKEGQEFNFTIKRG---VSTEDTVSVNYDDFVNDVEVGDILLV 220 (570)
Q Consensus 154 ------~~~~~i~I~~Dl~GpkiR~G~~~~----~i~l~~G~~v~lt~~~~---~~~~~~i~v~~~~l~~~v~~Gd~I~i 220 (570)
++ +|++||+||||||||||.+.+ ++.|++|+.|+|+.+.. .++.+.|+++|++|+++|++||+||+
T Consensus 117 ~~~~~~~~-~~vaIllDlkGPkIR~G~~~~~~~~~v~L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~Gd~Ili 195 (550)
T 3gr4_A 117 FASDPILY-RPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYV 195 (550)
T ss_dssp TTTCTTTC-CCCEEEEECCCSCCBBCCBTTBTTCCEEECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCEEEE
T ss_pred hccccccC-ceEEEEEeCCCCEEEEEecCCCCCCCeEEcCCCEEEEEeCCcccCCCCccEEecchHHHHhhcCCCCEEEE
Confidence 66 999999999999999999953 79999999999998753 57888999999999999999999999
Q ss_pred eCCeeEEEEEEEeCCeEEEEEEeCcEeccCcccccCCCccCCCCCChhhHHHhhhhhhcCCcEEEecCCCChhHHHHHHH
Q 008319 221 DGGMMSLAVKSKTKDLVKCIVVDGGELKSRRHLNVRGKSANLPSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKD 300 (570)
Q Consensus 221 DDG~i~l~V~~~~~~~i~~~v~~gG~l~s~KgIn~p~~~~~lp~lt~kD~~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~ 300 (570)
|||+|.|+|++++++.+.|+|++||.|+++||||+||..+++|+||+||++||+|++++|+|||++|||++++|+.++++
T Consensus 196 dDG~i~l~V~~v~~~~v~~~V~~gG~L~s~KgvNlPg~~l~lpalTekD~~dl~f~~~~~vD~ia~SfVr~a~Dv~~~r~ 275 (550)
T 3gr4_A 196 DDGLISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRK 275 (550)
T ss_dssp TTTTEEEEEEEECSSEEEEEEEECEEECSSCBEECTTSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHH
T ss_pred eCCEEEEEEEEEeCCEEEEEEEeCcEEcCCceeecCCCccCCCCCCHHHHHHHHHHHHcCCCEEEecCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCceEEEeecCcchhhhHHHHHHhCCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhc
Q 008319 301 YLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMID 380 (570)
Q Consensus 301 ~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~ 380 (570)
+|++.|.++.|||||||++||+|+|||++++|||||||||||+|+|+++|+.+||+|+++|+++|||||+||||||||+.
T Consensus 276 ~L~~~g~~i~IIAKIE~~eav~nldeIl~~sDgImVaRGDLgvei~~e~vp~~Qk~iI~~c~~agkpVi~ATQMLeSMi~ 355 (550)
T 3gr4_A 276 VLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIK 355 (550)
T ss_dssp HHTTTTTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSTTGGGGT
T ss_pred HHHhcCCCceEEEEeCCHHHHHHHHHHHHhCCEEEEccchhcccCCHHHHHHHHHHHHHHHHHhCCCEEEEehhhHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCccc--CCCCChhHHHHHHH
Q 008319 381 HPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFS--AHKSHMGDMFAFHS 458 (570)
Q Consensus 381 ~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~--~~~~~~~~~ia~~a 458 (570)
+|.|||||++||||||+||+|++|||+|||.|+||+|||++|++||+++|+..++..++..+.. ....+..+++|.+|
T Consensus 356 ~p~PTRAEvsDVanAvldG~DavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa 435 (550)
T 3gr4_A 356 KPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGA 435 (550)
T ss_dssp CSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHSCCCCCHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHcCCcEEEEecCccCCCCHHHHHHHHHHHHHHHhhcchhHHHHHhhhhccCCCCChHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998765433322211 12346889999999
Q ss_pred HHHHhhcCC-cEEEEcCChHHHHHHHhcCCCCeEEEEeCCHHHHHHhccccCcEEEEecCC------CCHHHHHHHHHHH
Q 008319 459 TTMANTLNT-PIIVFTRTGSMAVILSHYRPSSTIFAFTNQERIKQRLVLYQGVMPIYMQFS------DDVEETFSRAIKL 531 (570)
Q Consensus 459 v~~a~~~~a-~Iiv~T~sG~tA~~ls~~RP~~pIiavt~~~~taRrL~L~rGV~Pil~~~~------~d~d~~i~~al~~ 531 (570)
+++|++++| +||+||.||+||+++|||||.|||||+|++++++|||+|+|||+|++++.. .+.+++++.|+++
T Consensus 436 ~~~A~~l~a~aIv~~T~SG~TA~~iSr~RP~~PIia~T~~~~~aR~l~L~~GV~P~~~~~~~~~~~~~~~d~~~~~a~~~ 515 (550)
T 3gr4_A 436 VEASFKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQEAWAEDVDLRVNFAMNV 515 (550)
T ss_dssp HHHHHHTTCSCEEEECSSSHHHHHHHTTCCSSCEEEEESCHHHHHHGGGSTTEEEEECCSCCCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEEECCCcHHHHHHHhhCCCCCEEEEcCCHHHHHHHhccCCeEEEEecccccccccCCHHHHHHHHHHH
Confidence 999999999 999999999999999999999999999999999999999999999998754 4678899999999
Q ss_pred HHHcCCCCCCCEEEEEecCCCCCCCCCCccEEEEEEec
Q 008319 532 LMDKNLVTKGEFVTLVQSGAQPIWRQESTHHIQVRKVQ 569 (570)
Q Consensus 532 lke~Gllk~GD~VVvv~G~~~p~~~~G~tn~I~V~~V~ 569 (570)
++++|++++||.||+++|. |.+ .|+||+|||.+|+
T Consensus 516 ~~~~g~~~~GD~vVv~~G~--~~g-~G~TN~lrv~~v~ 550 (550)
T 3gr4_A 516 GKARGFFKKGDVVIVLTGW--RPG-SGFTNTMRVVPVP 550 (550)
T ss_dssp HHHTTSCCTTCEEEEEEES--SSS-TTCEEEEEEEECC
T ss_pred HHHcCCCCCcCEEEEEeCC--CCC-CCCCeEEEEEEcC
Confidence 9999999999999999995 656 8999999999885
No 2
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=100.00 E-value=4.7e-134 Score=1098.22 Aligned_cols=472 Identities=37% Similarity=0.575 Sum_probs=438.0
Q ss_pred CCCCCCceEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHh-hcCCCcEEEEeecCCCeeeec
Q 008319 95 PNARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNS-QFEDKAVAIMLDTKGPEVRSG 173 (570)
Q Consensus 95 ~~~~r~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~-~~~~~~i~I~~Dl~GpkiR~G 173 (570)
...+|||||||||||+|+++|+|++|+++||||||||||||++++|+++|+++|++++ +++ +|++||+||+|||||||
T Consensus 40 ~~~~RrTKIv~TlGPas~~~e~l~~Li~aGmnv~RlNfSHg~~e~h~~~i~~iR~~~~~~~~-~~vaIl~Dl~GPkIR~g 118 (526)
T 4drs_A 40 DVTQRKTQIICTIGPSCNNVESLIGLIDKGMSVARLNFSHGDHESHFKTLQNIREAAKARPH-STVGIMLDTKGPEIRTG 118 (526)
T ss_dssp --CCCCSEEEEECCGGGCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHHHTCTT-CCCEEEEECCCSCCBBC
T ss_pred CcccCCceEEEeeCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhcCC-CceEEEEECCCCeeEEE
Confidence 3568999999999999999999999999999999999999999999999999999986 456 99999999999999999
Q ss_pred cCCC--ceeecCCCEEEEEEec-CCCCccEEEeccCCcccccccCCEEEEeCCeeEEEEEEEeCCeEEEEEEeCcEeccC
Q 008319 174 DVPQ--PIILKEGQEFNFTIKR-GVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSR 250 (570)
Q Consensus 174 ~~~~--~i~l~~G~~v~lt~~~-~~~~~~~i~v~~~~l~~~v~~Gd~I~iDDG~i~l~V~~~~~~~i~~~v~~gG~l~s~ 250 (570)
.+.+ ++.|++||.|+|+.+. ..++.+.|+++|++|+++|++||.||+|||+|.|+|++++++.+.|+|.+||.|+++
T Consensus 119 ~~~~~~~i~L~~G~~v~lt~~~~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v~~~~i~~~V~~gG~L~~~ 198 (526)
T 4drs_A 119 MLEGGKPIELKAGQTLKITTDYSMLGNSECISCSYSLLPKSVQIGSTVLIADGSLSTQVLEIGDDFIVCKVLNSVTIGER 198 (526)
T ss_dssp CBSTTCCEECCTTSEEEEESCCSSCBCSSEEEBSCTTSTTTCCTTCEEEETTTTEEEEEEEECSSEEEEECCSCCEECSS
T ss_pred ecCCCCeEEecCCCEEEEEeCCccCCCcceeeecchhhHHHhcCCCEEEEeCCCceEEEEEEeCCeEEEEeccCcccccc
Confidence 9974 6999999999999874 467888999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCccCCCCCChhhHHH-hhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcC-------CCceEEEeecCcchhh
Q 008319 251 RHLNVRGKSANLPSITDKDWED-IKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCN-------ADIHVIVKIESADSIP 322 (570)
Q Consensus 251 KgIn~p~~~~~lp~lt~kD~~d-I~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~-------~~i~IiaKIEt~~gv~ 322 (570)
||||+||..+++|.||+||++| |+|++++|+|||++|||++++||.++|++|++.+ .+++||||||+++|++
T Consensus 199 KgvNlP~~~l~lp~lTekD~~D~l~fa~~~~vD~ialSFVr~~~Dv~~~r~~l~~~g~~~~~~~~~i~IiaKIE~~~av~ 278 (526)
T 4drs_A 199 KNMNLPGCKVHLPIIGDKDRHDIVDFALKYNLDFIALSFVQNGADVQLCRQIISENTQYSNGIPSSIKIISKIENLEGVI 278 (526)
T ss_dssp CBEECTTCCCCCCSSCHHHHHHHHHTTTTTTCSEEEETTCCSHHHHHHHHHHHHTCCTTTTTCCCCCEEEEEECSHHHHH
T ss_pred ccccCCCcccCcccccchhHHHHHHHHHHhccCeeeecccCchhhHHHHHHHHHhhCcccccccccceeeeehhccHHHH
Confidence 9999999999999999999998 6899999999999999999999999999999876 3689999999999999
Q ss_pred hHHHHHHhCCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccE
Q 008319 323 NLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADA 402 (570)
Q Consensus 323 NldeIl~~sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~ 402 (570)
|||||++++|||||||||||+|+|+++||.+||+||++|+++|||||+||||||||+.+|.|||||++|+||||+||+|+
T Consensus 279 NldeIi~~sDgIMVARGDLgvEip~e~vp~~QK~II~~c~~~gKPVI~ATQmLeSMi~np~PTRAEvsDVAnAV~DGaDa 358 (526)
T 4drs_A 279 NFDSICSESDGIMVARGDLGMEIPPEKIFVAQKCMISKCNVAGKPVVTATQMLESMIKSNRPTRAEMTDVANAVLDGSDC 358 (526)
T ss_dssp THHHHHHHSSEEEEECTTHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESCTTGGGGSSSSCCHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHhhccEEEEECCcccccCCHHHHHHHHHHHHHHHHHcCCeEEEhhhhhHHHhhCCCCCCchHHHHHHHHHhCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecccccCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCcccC--CCCChhHHHHHHHHHHHhhcCC-cEEEEcCChHHH
Q 008319 403 VMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFSA--HKSHMGDMFAFHSTTMANTLNT-PIIVFTRTGSMA 479 (570)
Q Consensus 403 vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~~--~~~~~~~~ia~~av~~a~~~~a-~Iiv~T~sG~tA 479 (570)
+|||+|||.|+||+|||++|++||+++|+.+++...+..+... .+.+..+++|.+|+++|++++| +||+||.||+||
T Consensus 359 vMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~sG~tA 438 (526)
T 4drs_A 359 VMLSGETANGAFPFDAVNVMSRVCAQAETCIDYPVLYHAIHSSVPKPVAVPEAIACSAVESAHDVNAKLIITITETGNTA 438 (526)
T ss_dssp EEESHHHHSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHTTCSEEEEECSSSHHH
T ss_pred EEEcchhhcccCHHHHHHHHHHHHHHHhhcccchhhhhhhhhccCCCCCHHHHHHHHHHHHHHhCCCCEEEEECCCcHHH
Confidence 9999999999999999999999999999987765433322111 1246899999999999999999 999999999999
Q ss_pred HHHHhcCCCCeEEEEeCCHHHHHHhccccCcEEEEecCCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCCCCCCCCC
Q 008319 480 VILSHYRPSSTIFAFTNQERIKQRLVLYQGVMPIYMQFSDDVEETFSRAIKLLMDKNLVTKGEFVTLVQSGAQPIWRQES 559 (570)
Q Consensus 480 ~~ls~~RP~~pIiavt~~~~taRrL~L~rGV~Pil~~~~~d~d~~i~~al~~lke~Gllk~GD~VVvv~G~~~p~~~~G~ 559 (570)
+++|||||.|||||+|++++++|||+|+|||+|+++++..+.+++++.|+++++++|++++||.||+++|. |++.+|+
T Consensus 439 ~~iSr~RP~~pI~a~T~~~~~~r~l~L~wGV~p~~~~~~~~~d~~i~~a~~~~~~~g~~~~GD~vVi~~G~--p~g~~G~ 516 (526)
T 4drs_A 439 RLISKYRPSQTIIACTAKPEVARGLKIARGVKTYVLNSIHHSEVVISNALALAKEESLIESGDFAIAVHGV--KESCPGS 516 (526)
T ss_dssp HHHHHTCCSSEEEEEESCHHHHHHGGGSTTEEEEECSCCCCHHHHHHHHHHHHHHTTSCCTTCEEEEEC-----------
T ss_pred HHHHhhCCCCCEEEECCCHHHHHhhhccCCeEEEEeCCCCCHHHHHHHHHHHHHHCCCCCCcCEEEEEecc--CCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999995 8888999
Q ss_pred ccEEEEEEec
Q 008319 560 THHIQVRKVQ 569 (570)
Q Consensus 560 tn~I~V~~V~ 569 (570)
||+|||++||
T Consensus 517 TN~lrv~~VP 526 (526)
T 4drs_A 517 CNLMKIVRCP 526 (526)
T ss_dssp -CCEEEEECC
T ss_pred ceEEEEEECC
Confidence 9999999986
No 3
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.5e-134 Score=1097.26 Aligned_cols=471 Identities=32% Similarity=0.525 Sum_probs=436.7
Q ss_pred CCCCCceEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHh-hcCCCcEEEEeecCCCeeeecc
Q 008319 96 NARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNS-QFEDKAVAIMLDTKGPEVRSGD 174 (570)
Q Consensus 96 ~~~r~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~-~~~~~~i~I~~Dl~GpkiR~G~ 174 (570)
..+|||||||||||+|+++|+|++|+++||||||||||||++|+|+++|+++|++++ +++ +|++||+||||||||+|.
T Consensus 43 ~~~rkTKIV~TiGPas~s~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~~~~~~~~-~~vaIllDl~GPkIR~G~ 121 (520)
T 3khd_A 43 LRSKKTHIVCTLGPACKSVETLVKLIDAGMDICRFNFSHGSHEDHKEMFNNVLKAQELRPN-CLLGMLLDTKGPEIRTGF 121 (520)
T ss_dssp GGGCSSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHCSS-CCCEEEEECCCCCEEBCE
T ss_pred ccCCCcEEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhcC-CceEEEEeCCCCeEEeec
Confidence 568999999999999999999999999999999999999999999999999999998 777 999999999999999999
Q ss_pred CCC-ceeecCCCEEEEEEe-cCCCCccEEEeccCCcccccccCCEEEEeCCeeEEEEEEEeCCeEEEEEEeCcEeccCcc
Q 008319 175 VPQ-PIILKEGQEFNFTIK-RGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRRH 252 (570)
Q Consensus 175 ~~~-~i~l~~G~~v~lt~~-~~~~~~~~i~v~~~~l~~~v~~Gd~I~iDDG~i~l~V~~~~~~~i~~~v~~gG~l~s~Kg 252 (570)
+.+ ++.|++|+.|+|+.+ ...|+.+.|+++|++|+++|++||+||+|||+|.|+|++++++.+.|+|++||.|+++||
T Consensus 122 ~~~~~~~L~~G~~~~lt~~~~~~g~~~~i~v~y~~l~~~v~~G~~IlidDG~i~l~V~~~~~~~v~~~V~~gG~L~~~Kg 201 (520)
T 3khd_A 122 LKNKEVHLKEGSKLKLVTDYEFLGDETCIACSYKKLPQSVKPGNIILIADGSVSCKVLETHEDHVITEVLNSAVIGERKN 201 (520)
T ss_dssp EC-----------CEEESCTTCEECTTEEEBSCTTHHHHCCC-CEEEETTTTEEEEEEEECSSCEEEEECC-CCCCSSCE
T ss_pred cCCCCeEecCCCEEEEecCCCcCCCccEEecccHHHHhhcCcCcEEEEeCCEEEEEEEEEECCEEEEEEEeCeEEeCCce
Confidence 975 579999999999987 556788899999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCccCCCCCChhhHHHh-hhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHhC
Q 008319 253 LNVRGKSANLPSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISAS 331 (570)
Q Consensus 253 In~p~~~~~lp~lt~kD~~dI-~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~s 331 (570)
||+||..+++|+||+||++|| +|++++|+|||++|||++++|+.++|++|++.|.++.|||||||++||+|+|||++++
T Consensus 202 vNlPg~~~~lp~lTekD~~dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~g~~i~IIAKIE~~eav~nldeIl~~s 281 (520)
T 3khd_A 202 MNLPNVKVDLPIISEKDKNDILNFAIPMGCNFIAASFIQSADDVRLIRNLLGPRGRHIKIIPKIENIEGIIHFDKILAES 281 (520)
T ss_dssp EECTTSCCCSCSSCHHHHHHHHHTHHHHTCCEEEETTCCSHHHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHHS
T ss_pred eecCCCcCCCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCCcEEEEECCHHHHHhHHHHHHhC
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccC
Q 008319 332 DGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAH 411 (570)
Q Consensus 332 DgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~ 411 (570)
|||||||||||+|+|+++|+.+||+|+++|+++|||||+||||||||+.+|.|||||++||||||+||+|++|||+|||.
T Consensus 282 DGIMVARGDLgvEi~~e~vp~~Qk~iI~~c~~aGKPVi~ATQMLeSMi~~p~PTRAEvsDVanAVldGaDavMLSgETA~ 361 (520)
T 3khd_A 282 DGIMIARGDLGMEISPEKVFLAQKLMISKCNLQGKPIITATQMLESMTKNPRPTRAEVTDVANAVLDGTDCVMLSGETAG 361 (520)
T ss_dssp SCEEECHHHHTTTSCGGGHHHHHHHHHHHHHHHTCCEEECCCCCGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHS
T ss_pred CcEEEccccccccCCHHHHHHHHHHHHHHHHHcCCCeEEeehhhHHHhcCCCccHHHHHHHHHHHHhCCCEEEecccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhhcCCCCCCCCCCccc--CCCCChhHHHHHHHHHHHhhcCC-cEEEEcCChHHHHHHHhcCCC
Q 008319 412 GKFPLKAVKVMHTVALRTESSLPVSITPPTQFS--AHKSHMGDMFAFHSTTMANTLNT-PIIVFTRTGSMAVILSHYRPS 488 (570)
Q Consensus 412 G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~--~~~~~~~~~ia~~av~~a~~~~a-~Iiv~T~sG~tA~~ls~~RP~ 488 (570)
|+||+|||++|++||+++|+.+++...+..+.. ....+..+++|.+|+++|++++| +||+||.||+||+++|||||.
T Consensus 362 G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~TA~~vSr~RP~ 441 (520)
T 3khd_A 362 GKFPVEAVTIMSKICLEAEACIDYKLLYQSLVNAIETPISVQEAVARSAVETAESIQASLIIALTETGYTARLIAKYKPS 441 (520)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHHHTTCSEEEEECSSSHHHHHHHHTCCS
T ss_pred CcCHHHHHHHHHHHHHHHHhhhhhhhhHhhhhhccCCCCCHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHhcCCC
Confidence 999999999999999999998765433321111 11236789999999999999999 999999999999999999999
Q ss_pred CeEEEEeCCHHHHHHhccccCcEEEEecCCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCCCCCCCCCccEEEEEEe
Q 008319 489 STIFAFTNQERIKQRLVLYQGVMPIYMQFSDDVEETFSRAIKLLMDKNLVTKGEFVTLVQSGAQPIWRQESTHHIQVRKV 568 (570)
Q Consensus 489 ~pIiavt~~~~taRrL~L~rGV~Pil~~~~~d~d~~i~~al~~lke~Gllk~GD~VVvv~G~~~p~~~~G~tn~I~V~~V 568 (570)
|||||+|++++++|||+|+|||+|++++...+.+++++.++++++++|++++||.||+++|. |.+.+|+||+|||++|
T Consensus 442 ~PIia~T~~~~~~r~l~L~~GV~p~~~~~~~~~d~~~~~a~~~~~~~g~~~~GD~vVv~~G~--~~g~~G~TN~lrv~~v 519 (520)
T 3khd_A 442 CTILALSASDSTVKCLNVHRGVTCIKVGSFQGTDIVIRNAIEIAKQRNMAKVGDSVIAIHGI--KEEVSGGTNLMKVVQI 519 (520)
T ss_dssp SEEEEEESCHHHHHHGGGSTTEEEEECCSCCCHHHHHHHHHHHHHHTTSSCTTCEEEEEEC---CCSSTTCEEEEEEEEC
T ss_pred CCEEEEcCCHHHHHHHhccCCeEEEEeCCCCCHHHHHHHHHHHHHHCCCCCCcCEEEEEeCc--cCCCCCCCeEEEEEEe
Confidence 99999999999999999999999999988889999999999999999999999999999995 7778999999999987
Q ss_pred c
Q 008319 569 Q 569 (570)
Q Consensus 569 ~ 569 (570)
+
T Consensus 520 ~ 520 (520)
T 3khd_A 520 E 520 (520)
T ss_dssp C
T ss_pred C
Confidence 3
No 4
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=100.00 E-value=3.1e-133 Score=1086.25 Aligned_cols=471 Identities=34% Similarity=0.545 Sum_probs=440.1
Q ss_pred CCCCCceEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhc-CCCcEEEEeecCCCeeeecc
Q 008319 96 NARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQF-EDKAVAIMLDTKGPEVRSGD 174 (570)
Q Consensus 96 ~~~r~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~~-~~~~i~I~~Dl~GpkiR~G~ 174 (570)
..+|||||||||||+|+++|+|++|+++||||||||||||++++|+++|+++|++++++ + +|++||+||||||||||.
T Consensus 33 ~~~rkTKIV~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~iR~~~~~~~~-~~vaIl~Dl~GPkIR~g~ 111 (511)
T 3gg8_A 33 WTAHRTRIVCTMGPACWNVDTLVKMIDAGMNVCRLNFSHGDHETHARTVQNIQEAMKQRPE-ARLAILLDTKGPEIRTGF 111 (511)
T ss_dssp HTTCSSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHCTT-CCCEEEEECCCCCCBBCC
T ss_pred cccCccEEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCC-CceEEEEECCCCEEeccc
Confidence 35799999999999999999999999999999999999999999999999999999998 7 999999999999999999
Q ss_pred CCC--ceeecCCCEEEEEEe-cCCCCccEEEeccCCcccccccCCEEEEeCCeeEEEEEEEeCCeEEEEEEeCcEeccCc
Q 008319 175 VPQ--PIILKEGQEFNFTIK-RGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRR 251 (570)
Q Consensus 175 ~~~--~i~l~~G~~v~lt~~-~~~~~~~~i~v~~~~l~~~v~~Gd~I~iDDG~i~l~V~~~~~~~i~~~v~~gG~l~s~K 251 (570)
+.+ ++.|++||.|+|+.+ ...|+.+.|+++|++|+++|++||.||+|||+|.|+|.+++++.+.|+|++||.|+++|
T Consensus 112 ~~~~~~v~L~~G~~~~lt~~~~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v~~~~i~~~V~~gG~L~~~K 191 (511)
T 3gg8_A 112 LKDHKPITLQQGATLKIVTDYNLIGDETTIACSYGALPQSVKPGNTILIADGSLSVKVVEVGSDYVITQAQNTATIGERK 191 (511)
T ss_dssp -----CEEECTTCEEEEESCTTCCCCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEECSSEEEEEESSCEEECSSC
T ss_pred CCCCCCEEEccCCEEEEEECCCCCCCCCEEEcchHHHHhhcCCCCEEEEECCEEEEEEEEEeCCEEEEEEEeCeEEcCCc
Confidence 975 799999999999988 56788889999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCccCCCCCChhhHHHh-hhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh
Q 008319 252 HLNVRGKSANLPSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA 330 (570)
Q Consensus 252 gIn~p~~~~~lp~lt~kD~~dI-~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~ 330 (570)
|||+||..+++|.||+||++|| +|++++|+|||++|||++++|+.++|++|++.|.++.|||||||++|++|||||+++
T Consensus 192 gvNlPg~~~~lp~lTekD~~Dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~~~iiaKIE~~eav~nldeIl~~ 271 (511)
T 3gg8_A 192 NMNLPNVKVQLPVIGEKDKHDILNFGIPMGCNFIAASFVQSADDVRYIRGLLGPRGRHIRIIPKIENVEGLVNFDEILAE 271 (511)
T ss_dssp BEECTTCCCCSCSSCHHHHHHHHHTTTTTTCCEEEETTCCSHHHHHHHHHHHTGGGTTCEEEEEECSHHHHHTHHHHHHH
T ss_pred ceecCCCccCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHHh
Confidence 9999999999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEeccccc
Q 008319 331 SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETA 410 (570)
Q Consensus 331 sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA 410 (570)
+|||||||||||+|+|+++|+.+||+|+++|+++|||||+||||||||+.+|.|||||++|||||++||+|++|||+|||
T Consensus 272 sDgimVaRGDLgvei~~e~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAEvsDVAnAV~dGaDavMLSgETA 351 (511)
T 3gg8_A 272 ADGIMIARGDLGMEIPPEKVFLAQKMMIAKCNVVGKPVITATQMLESMIKNPRPTRAEAADVANAVLDGTDCVMLSGETA 351 (511)
T ss_dssp CSCEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHH
T ss_pred CCeEEEecchhcCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHhCCCEEEeccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCccc--CCCCChhHHHHHHHHHHHhhcCC-cEEEEcCChHHHHHHHhcCC
Q 008319 411 HGKFPLKAVKVMHTVALRTESSLPVSITPPTQFS--AHKSHMGDMFAFHSTTMANTLNT-PIIVFTRTGSMAVILSHYRP 487 (570)
Q Consensus 411 ~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~--~~~~~~~~~ia~~av~~a~~~~a-~Iiv~T~sG~tA~~ls~~RP 487 (570)
.|+||+|||++|++||+++|+.+++...+..+.. ....+..+++|.+|+++|++++| +||+||.||+||+++|||||
T Consensus 352 ~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~tA~~iSr~RP 431 (511)
T 3gg8_A 352 NGEFPVITVETMARICYEAETCVDYPALYRAMCLAVPPPISTQEAVARAAVETAECVNAAIILALTETGQTARLIAKYRP 431 (511)
T ss_dssp TCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHHTCC
T ss_pred CCCCHHHHHHHHHHHHHHHHhchhHHHHHhhhhhcccCCCCHHHHHHHHHHHHHHhcCCCEEEEECCCchHHHHHHhhCC
Confidence 9999999999999999999988765433221110 11236789999999999999999 99999999999999999999
Q ss_pred CCeEEEEeCCHHHHHHhccccCcEEEEecCCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCCCCCCCCCccEEEEEE
Q 008319 488 SSTIFAFTNQERIKQRLVLYQGVMPIYMQFSDDVEETFSRAIKLLMDKNLVTKGEFVTLVQSGAQPIWRQESTHHIQVRK 567 (570)
Q Consensus 488 ~~pIiavt~~~~taRrL~L~rGV~Pil~~~~~d~d~~i~~al~~lke~Gllk~GD~VVvv~G~~~p~~~~G~tn~I~V~~ 567 (570)
.|||||+|++++++|||+|+|||+|++++...+.+++++.|+++++++|++++||.||+++|. |.+.+|+||+|||.+
T Consensus 432 ~~PIia~T~~~~~~r~l~L~~GV~p~~~~~~~~~d~~~~~a~~~~~~~g~~~~GD~vVi~~G~--~~g~~G~TN~lrv~~ 509 (511)
T 3gg8_A 432 MQPILALSASESTIKHLQVIRGVTTMQVPSFQGTDHVIRNAIVVAKERELVTEGESIVAVHGM--KEEVAGSSNLLKVLT 509 (511)
T ss_dssp SSCEEEEESCHHHHHHGGGSTTEEEEECCC--CHHHHHHHHHHHHHHTTSCCTTCEEEEEEEC--------CCEEEEEEE
T ss_pred CCCEEEEcCCHHHHHHhhccCCeEEEEeCCCCCHHHHHHHHHHHHHHCCCCCCcCEEEEEeCc--cCCCCCCCeEEEEEE
Confidence 999999999999999999999999999988889999999999999999999999999999995 777889999999998
Q ss_pred ec
Q 008319 568 VQ 569 (570)
Q Consensus 568 V~ 569 (570)
|+
T Consensus 510 v~ 511 (511)
T 3gg8_A 510 VE 511 (511)
T ss_dssp CC
T ss_pred cC
Confidence 85
No 5
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=100.00 E-value=2.2e-133 Score=1086.13 Aligned_cols=471 Identities=34% Similarity=0.558 Sum_probs=440.2
Q ss_pred CCCCCCCceEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCCcEEEEeecCCCeeeec
Q 008319 94 GPNARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSG 173 (570)
Q Consensus 94 ~~~~~r~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~GpkiR~G 173 (570)
++..+|||||||||||+|+++|+|++|+++||||||||||||++|+|+++|+++|+++++++ +|++||+||||||||||
T Consensus 15 ~~~~~rkTKIv~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~~~~~~g-~~vaIl~Dl~GPkIR~g 93 (499)
T 3hqn_D 15 PVANYRAARIICTIGPSTQSVEALKGLIQSGMSVARMNFSHGSHEYHQTTINNVRQAAAELG-VNIAIALDTKGPEIRTG 93 (499)
T ss_dssp CCCSSCCSEEEEECSTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHT-CCCEEEEECCCCCCBBC
T ss_pred CcccCCCeEEEEEECCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhC-CcEEEEEeCCCCEEeee
Confidence 45668999999999999999999999999999999999999999999999999999999998 99999999999999999
Q ss_pred cCCC--ceeecCCCEEEEEEec---CCCCccEEEeccCCcccccccCCEEEEeCCeeEEEEEEEe-CCeEEEEEEeCcEe
Q 008319 174 DVPQ--PIILKEGQEFNFTIKR---GVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKT-KDLVKCIVVDGGEL 247 (570)
Q Consensus 174 ~~~~--~i~l~~G~~v~lt~~~---~~~~~~~i~v~~~~l~~~v~~Gd~I~iDDG~i~l~V~~~~-~~~i~~~v~~gG~l 247 (570)
.+.+ ++ |++|+.|+|+.+. ..++.+.|+++|++|+++|++||.||+|||+|.|+|++++ ++.+.|+|++||.|
T Consensus 94 ~~~~~~~v-L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~i~~~v~~gG~L 172 (499)
T 3hqn_D 94 QFVGGDAV-MERGATCYVTTDPAFADKGTKDKFYIDYQNLSKVVRPGNYIYIDDGILILQVQSHEDEQTLECTVTNSHTI 172 (499)
T ss_dssp CBGGGEEE-ECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEEETTEEEEEECSCEEE
T ss_pred ccCCCCeE-EcCCCEEEEEecCcccCCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEcCCCeEEEEEEeCcEe
Confidence 9975 57 9999999999873 4678889999999999999999999999999999999998 67899999999999
Q ss_pred ccCcccccCCCccCCCCCChhhHHHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHH
Q 008319 248 KSRRHLNVRGKSANLPSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSI 327 (570)
Q Consensus 248 ~s~KgIn~p~~~~~lp~lt~kD~~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeI 327 (570)
+++||||+||..+++|+||+||++||+|++++|+|+|++|||++++|+.+++++|++.|.++.|||||||++||+|+|||
T Consensus 173 ~~~KgvNlPg~~~~lp~ltekD~~dl~~~~~~~vD~i~~sfVr~a~dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeI 252 (499)
T 3hqn_D 173 SDRRGVNLPGCDVDLPAVSAKDRVDLQFGVEQGVDMIFASFIRSAEQVGDVRKALGPKGRDIMIICKIENHQGVQNIDSI 252 (499)
T ss_dssp ETTCBEECTTSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHCGGGTTSEEEEEECSHHHHHTHHHH
T ss_pred eCCCceecCCCCCCCCCCCHHHHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999989999999999999999999999
Q ss_pred HHhCCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecc
Q 008319 328 ISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (570)
Q Consensus 328 l~~sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (570)
++++|||||||||||+|+|.++|+.+||+|+++|+++|||||+||||||||+++|.|||||++||||||.||+|++|||+
T Consensus 253 l~~sDgImVaRGDLgvEi~~e~vp~~Qk~iI~~c~~agkpVi~ATQmLeSMi~~p~PTRAEvsDVanaV~dG~DavMLSg 332 (499)
T 3hqn_D 253 IEESDGIMVARGDLGVEIPAEKVVVAQKILISKCNVAGKPVICATQMLESMTYNPRPTRAEVSDVANAVFNGADCVMLSG 332 (499)
T ss_dssp HHHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTSSSCCHHHHHHHHHHHHHTCSEEEESH
T ss_pred HHhCCcEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEeehhHHHhccCCCccHHHHHHHHHHHHcCCcEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCccc--CCCCChhHHHHHHHHHHHhhcCC-cEEEEcCChHHHHHHHh
Q 008319 408 ETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFS--AHKSHMGDMFAFHSTTMANTLNT-PIIVFTRTGSMAVILSH 484 (570)
Q Consensus 408 ETA~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~--~~~~~~~~~ia~~av~~a~~~~a-~Iiv~T~sG~tA~~ls~ 484 (570)
|||.|+||+|||++|++||+++|+.+++...|..+.. ....+..+++|.+|+++|++++| +||+||.||+||+++||
T Consensus 333 ETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~tA~~isr 412 (499)
T 3hqn_D 333 ETAKGKYPNEVVQYMARICLEAQSALNEYVFFNSIKKLQHIPMSADEAVCSSAVNSVYETKAKAMVVLSNTGRSARLVAK 412 (499)
T ss_dssp HHHTCSCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHHHHHhcchhHHHHhhhhhccCCCCCHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHh
Confidence 9999999999999999999999988765433221111 11246889999999999999999 99999999999999999
Q ss_pred cCCCCeEEEEeCCHHHHHHhccccCcEEEEecCC-----CCHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCCCCCCCCC
Q 008319 485 YRPSSTIFAFTNQERIKQRLVLYQGVMPIYMQFS-----DDVEETFSRAIKLLMDKNLVTKGEFVTLVQSGAQPIWRQES 559 (570)
Q Consensus 485 ~RP~~pIiavt~~~~taRrL~L~rGV~Pil~~~~-----~d~d~~i~~al~~lke~Gllk~GD~VVvv~G~~~p~~~~G~ 559 (570)
|||.|||||+|++++++|||+|+|||+|++++.. .+.+++++.|+++++++|++++||.||+++|. | ..+|+
T Consensus 413 ~RP~~pIia~T~~~~~~r~l~L~~GV~p~~~~~~~~~~~~~~d~~~~~a~~~~~~~g~~~~GD~vVv~~G~--~-~~~G~ 489 (499)
T 3hqn_D 413 YRPNCPIVCVTTRLQTCRQLNITQGVESVFFDADKLGHDEGKEHRVAAGVEFAKSKGYVQTGDYCVVIHAD--H-KVKGY 489 (499)
T ss_dssp TCCSSCEEEEESCHHHHHHGGGSTTEEEEECCHHHHCCCTTCHHHHHHHHHHHHHTTSCCTTCEEEEEEEC--C------
T ss_pred hCCCCCEEEEcCCHHHHHHhhccCCeEEEEeccccccccCCHHHHHHHHHHHHHHcCCCCCcCEEEEEeCC--C-CCCCC
Confidence 9999999999999999999999999999998653 37899999999999999999999999999995 5 35899
Q ss_pred ccEEEEEEec
Q 008319 560 THHIQVRKVQ 569 (570)
Q Consensus 560 tn~I~V~~V~ 569 (570)
||+|||++|+
T Consensus 490 TN~~rv~~v~ 499 (499)
T 3hqn_D 490 ANQTRILLVE 499 (499)
T ss_dssp CEEEEEEECC
T ss_pred CeEEEEEEcC
Confidence 9999999874
No 6
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=100.00 E-value=1.1e-132 Score=1102.29 Aligned_cols=478 Identities=40% Similarity=0.636 Sum_probs=448.7
Q ss_pred CCccCCCCCCCCceEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCCcEEEEeecCCC
Q 008319 89 GKGVVGPNARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (570)
Q Consensus 89 ~~~~~~~~~~r~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~Gp 168 (570)
+.....|.++|||||||||||+|+++|+|++|+++||||||||||||++|+|+++|+++|+++++++ +|++|++|||||
T Consensus 13 ~~~~~~~~~~r~TKIv~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~iR~~~~~~~-~~vail~Dl~GP 91 (606)
T 3t05_A 13 GLVPRGSHMMRKTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLD-KIVAILLDTKGP 91 (606)
T ss_dssp ---------CCCSEEEEECCGGGCSHHHHHHHHHTTEEEEEEETTSSCHHHHHHHHHHHHHHHHHTT-CCCEEEEECCCC
T ss_pred CcCcCCcccccCceEEEEcCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhC-CCEEEEEeCCCC
Confidence 3344456678999999999999999999999999999999999999999999999999999999998 999999999999
Q ss_pred eeeeccCC-CceeecCCCEEEEEEecCCCCccEEEeccCCcccccccCCEEEEeCCeeEEEE--EEEeCCeEEEEEEeCc
Q 008319 169 EVRSGDVP-QPIILKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAV--KSKTKDLVKCIVVDGG 245 (570)
Q Consensus 169 kiR~G~~~-~~i~l~~G~~v~lt~~~~~~~~~~i~v~~~~l~~~v~~Gd~I~iDDG~i~l~V--~~~~~~~i~~~v~~gG 245 (570)
|||||.+. +++.|++||.|+|+.++..++.+.|+++|++|++++++||+||+|||+|.|+| .+++++.+.|+|++||
T Consensus 92 kiR~g~~~~~~i~L~~G~~~~lt~~~~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~~v~~~V~~gG 171 (606)
T 3t05_A 92 EIRTHNMKDGIIELERGNEVIVSMNEVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDIDHAKKEVKCDILNSG 171 (606)
T ss_dssp CCBBCCBTTSEEECCSSCEEEEESSCCCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEETTTTEEEEEECSCC
T ss_pred EEEeecCCCCCEEEcCCCEEEEEecCcCCCCCEEEeccHHHHHhcCCCCEEEEeCCeEEEEEEEEEecCCEEEEEEEECe
Confidence 99999996 47999999999999987778889999999999999999999999999999999 7788999999999999
Q ss_pred EeccCcccccCCCccCCCCCChhhHHHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHH
Q 008319 246 ELKSRRHLNVRGKSANLPSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLH 325 (570)
Q Consensus 246 ~l~s~KgIn~p~~~~~lp~lt~kD~~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~Nld 325 (570)
.|+++||||+||..+++|+||+||++||+|++++|+|||++|||++++|+.++|++|++.|.++.|||||||++|++|||
T Consensus 172 ~L~~~KgvNlPg~~~~lp~ltekD~~dl~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~i~IiaKIE~~eav~nld 251 (606)
T 3t05_A 172 ELKNKKGVNLPGVRVSLPGITEKDAEDIRFGIKENVDFIAASFVRRPSDVLEIREILEEQKANISVFPKIENQEGIDNIE 251 (606)
T ss_dssp EEETTCBEECSSSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHHHTTCCCEEEECCCSHHHHHTHH
T ss_pred EEeCCceEECCCCccCCCCCChhHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEe
Q 008319 326 SIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 405 (570)
Q Consensus 326 eIl~~sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL 405 (570)
||++++|||||||||||+|+|+++||.+||+|+++|+++|||||+||||||||+++|.|||||++|+|||++||+|++||
T Consensus 252 eIl~~sDGImVARGDLgvei~~e~vp~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAv~dGaDavML 331 (606)
T 3t05_A 252 EILEVSDGLMVARGDMGVEIPPEKVPMVQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVML 331 (606)
T ss_dssp HHHHHCSCEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGTTCSSCCHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHhCCEEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHcCCCEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCcccCCCCChhHHHHHHHHHHHhhcCC-cEEEEcCChHHHHHHHh
Q 008319 406 SGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFSAHKSHMGDMFAFHSTTMANTLNT-PIIVFTRTGSMAVILSH 484 (570)
Q Consensus 406 s~ETA~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a-~Iiv~T~sG~tA~~ls~ 484 (570)
|+|||.|+||+|||++|++||+++|+..++...+.........+..+++|.+|+++|++++| +||+||.||+||+++||
T Consensus 332 SgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~a~~l~a~aIv~~T~sG~ta~~isr 411 (606)
T 3t05_A 332 SGETAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSDRTKLVETSLVNAIGISVAHTALNLNVKAIVAATESGSTARTISK 411 (606)
T ss_dssp CHHHHSCSCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHH
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHhhhhhHhhhhhhccccCCCHHHHHHHHHHHHHHhcCCCEEEEEcCCchHHHHHHh
Confidence 99999999999999999999999999876543322111111346889999999999999999 99999999999999999
Q ss_pred cCCCCeEEEEeCCHHHHHHhccccCcEEEEecCCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCCCCCCCCCccEEE
Q 008319 485 YRPSSTIFAFTNQERIKQRLVLYQGVMPIYMQFSDDVEETFSRAIKLLMDKNLVTKGEFVTLVQSGAQPIWRQESTHHIQ 564 (570)
Q Consensus 485 ~RP~~pIiavt~~~~taRrL~L~rGV~Pil~~~~~d~d~~i~~al~~lke~Gllk~GD~VVvv~G~~~p~~~~G~tn~I~ 564 (570)
|||.|||||+|++++++|||+|+|||+|++++...+.+++++.++++++++|++++||.||+++|. |++.+|+||+||
T Consensus 412 ~RP~~pIia~t~~~~~~r~l~L~~GV~p~~~~~~~~~~~~~~~a~~~~~~~g~~~~GD~vVi~~G~--p~g~~g~tN~~~ 489 (606)
T 3t05_A 412 YRPHSDIIAVTPSEETARQCSIVWGVQPVVKKGRKSTDALLNNAVATAVETGRVTNGDLIIITAGV--PTGETGTTNMMK 489 (606)
T ss_dssp TCCSSEEEEEESCHHHHHHHHTSSSEEEEECCCCSSHHHHHHHHHHHHHHTTSCCTTCEEEEEECS--STTTCSSCCEEE
T ss_pred hCCCCCEEEEcCCHHHHHhhhccCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEeCc--cCCCCCCccceE
Confidence 999999999999999999999999999999988889999999999999999999999999999995 778899999999
Q ss_pred EEEec
Q 008319 565 VRKVQ 569 (570)
Q Consensus 565 V~~V~ 569 (570)
|++|+
T Consensus 490 v~~v~ 494 (606)
T 3t05_A 490 IHLVG 494 (606)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 99874
No 7
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=100.00 E-value=1.8e-131 Score=1067.68 Aligned_cols=465 Identities=38% Similarity=0.629 Sum_probs=427.2
Q ss_pred CCCceEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCCcEEEEeecCCCeeeeccCC-
Q 008319 98 RRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVP- 176 (570)
Q Consensus 98 ~r~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~GpkiR~G~~~- 176 (570)
+|||||||||||+|+++|+|++|+++||||||||||||++++|+++|+++|+++++++ +|++|++||||||||||.+.
T Consensus 1 ~r~tkIv~TiGPas~~~e~l~~li~aGm~v~RlNfsHg~~e~h~~~i~~iR~~~~~~~-~~v~il~Dl~GPkiR~g~~~~ 79 (470)
T 1e0t_A 1 MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTG-KTAAILLDTKGPEIRTMKLEG 79 (470)
T ss_dssp CCCSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHT-CCCEEEEECCCCCEEBCCBGG
T ss_pred CCcceEEEECCCccCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhcC-CceEEEEeCCCCEEEEEecCC
Confidence 4799999999999999999999999999999999999999999999999999999998 99999999999999999997
Q ss_pred C-ceeecCCCEEEEEEe-cCCCCccEEEeccCCcccccccCCEEEEeCCeeEEEEEEEeCCeEEEEEEeCcEeccCcccc
Q 008319 177 Q-PIILKEGQEFNFTIK-RGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRRHLN 254 (570)
Q Consensus 177 ~-~i~l~~G~~v~lt~~-~~~~~~~~i~v~~~~l~~~v~~Gd~I~iDDG~i~l~V~~~~~~~i~~~v~~gG~l~s~KgIn 254 (570)
+ ++.|++||.|+|+.+ ...|+.+.++++|++|+++|++||.||+|||+|.|+|++++++.+.|+|++||.|+++||||
T Consensus 80 ~~~v~L~~G~~~~lt~~~~~~g~~~~v~v~y~~l~~~v~~Gd~ilidDG~i~l~V~~~~~~~i~~~v~~gG~L~~~KgvN 159 (470)
T 1e0t_A 80 GNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVN 159 (470)
T ss_dssp GCCEEECTTCEEEEESCTTCCBBTTEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEETTEEEEEECSCEEECSSCEEE
T ss_pred CCceEEecCCEEEEEeCCccCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEeCCeEEEEEecCcEEeCCceee
Confidence 3 799999999999987 34678889999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccCCCCCChhhHHHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhc-CCCceEEEeecCcchhhhHHHHHHhCCE
Q 008319 255 VRGKSANLPSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSC-NADIHVIVKIESADSIPNLHSIISASDG 333 (570)
Q Consensus 255 ~p~~~~~lp~lt~kD~~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~-~~~i~IiaKIEt~~gv~NldeIl~~sDg 333 (570)
+||..+++|.||++|.+||+|++++|+|+|++|||++++|++++++++++. |.++.|||||||++|++|+|||++++||
T Consensus 160 lPg~~~~lp~ltekD~~Di~~~l~~gvD~I~lsfV~saeDv~~~~~~l~~~~~~~i~IiakIEt~eav~nldeI~~~sDg 239 (470)
T 1e0t_A 160 LPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDG 239 (470)
T ss_dssp CSSCCCCCCSSCHHHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHHHHTTTCTTCEEEEEECSHHHHHTHHHHHHHSSE
T ss_pred cCCCcCCCCCCCcCCHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHHHCCE
Confidence 999999999999999999999999999999999999999999999999998 8899999999999999999999999999
Q ss_pred EEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCC
Q 008319 334 AMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGK 413 (570)
Q Consensus 334 ImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~ 413 (570)
|||||||||+|+|.++|+.+||+|+.+|+++|||+|+||||||||+.+|.|||||++||+|||+||+|++|||+|||.|+
T Consensus 240 ImVargDLgveig~e~v~~~qk~ii~~araaGkpvI~ATQMLeSMi~~p~PTRAEvsDVanAV~dG~DavMLSgETA~G~ 319 (470)
T 1e0t_A 240 IMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATMMLDSMIKNPRPTDAEAGDVANAILDGTDAVMLSGESAKGK 319 (470)
T ss_dssp EEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCEEEEECC---------CCCHHHHHHHHHHHHHTCSEEEECCC-----
T ss_pred EEECchHhhhhcCHHHHHHHHHHHHHHHHHcCCCEEEechhhHhhccCCCccHHHHhhhhHhhhcCccEEEecccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhcCCCCCCCCCCcccCCCCChhHHHHHHHHHHHhhcCC-cEEEEcCChHHHHHHHhcCCCCeEE
Q 008319 414 FPLKAVKVMHTVALRTESSLPVSITPPTQFSAHKSHMGDMFAFHSTTMANTLNT-PIIVFTRTGSMAVILSHYRPSSTIF 492 (570)
Q Consensus 414 yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a-~Iiv~T~sG~tA~~ls~~RP~~pIi 492 (570)
||+|||++|++||+++|+.+++...+..... ..+..+++|.+|+++|++++| +||+||.||+||+++|||||.||||
T Consensus 320 yPveaV~~m~~I~~~~E~~~~~~~~~~~~~~--~~~~~~aia~aa~~~a~~l~a~aIv~~T~sG~ta~~isr~RP~~pI~ 397 (470)
T 1e0t_A 320 YPLEAVSIMATICERTDRVMNSRLEFNNDNR--KLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATIL 397 (470)
T ss_dssp -CHHHHHHHHHHHHHHHTTCCCCCC-----------CHHHHHHHHHHHHHHTTCSBEEEECSSSHHHHHHHTTCCSSBEE
T ss_pred CHHHHHHHHHHHHHHHHhhhhhhHHHhhhcc--ccchHHHHHHHHHHHHHhcCCCEEEEECCChhHHHHHHhhCCCCCEE
Confidence 9999999999999999997665433332211 134689999999999999999 9999999999999999999999999
Q ss_pred EEeCCHHHHHHhccccCcEEEEecCCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCCCCCCCCCccEEEEEEe
Q 008319 493 AFTNQERIKQRLVLYQGVMPIYMQFSDDVEETFSRAIKLLMDKNLVTKGEFVTLVQSGAQPIWRQESTHHIQVRKV 568 (570)
Q Consensus 493 avt~~~~taRrL~L~rGV~Pil~~~~~d~d~~i~~al~~lke~Gllk~GD~VVvv~G~~~p~~~~G~tn~I~V~~V 568 (570)
|+|++++++|||+|+|||+|+++++..+.+++++.++++++++|++++||.||+++|. | +..|+||+|||++|
T Consensus 398 a~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~a~~~~~~~g~~~~GD~vvv~~g~--~-~~~g~tn~~~v~~v 470 (470)
T 1e0t_A 398 ALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGA--L-VPSGTTNTASVHVL 470 (470)
T ss_dssp EEESCHHHHHHGGGSTTEEEEECSCCCSHHHHHHHHHHHHHHTSSSCTTCEEEEEECS--S-SCTTCCCEEEEEEC
T ss_pred EECCCHHHHHHhhhhccceEEEecCCCCHHHHHHHHHHHHHHCCCCCCcCEEEEEeCC--C-CCCCccceEEEEEC
Confidence 9999999999999999999999998889999999999999999999999999999995 6 77899999999875
No 8
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=100.00 E-value=1.1e-128 Score=1072.52 Aligned_cols=468 Identities=40% Similarity=0.650 Sum_probs=444.3
Q ss_pred CCCceEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCCcEEEEeecCCCeeeeccCCC
Q 008319 98 RRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVPQ 177 (570)
Q Consensus 98 ~r~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~GpkiR~G~~~~ 177 (570)
+|||||||||||+|+++|+|++|+++||||||||||||++++|+++|+++|+++++++ +|++|++||||||||||.+.+
T Consensus 2 ~r~tkIv~TiGPas~~~~~l~~l~~aGm~v~RlNfsHg~~~~h~~~i~~ir~~~~~~~-~~v~il~Dl~GPkiR~g~~~~ 80 (587)
T 2e28_A 2 KRKTKIVSTIGPASESVDKLVQLMEAGMNVARLNFSHGDHEEHGRRIANIREAAKRTG-RTVAILLDTKGPEIRTHNMEN 80 (587)
T ss_dssp CCCSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHTT-CCCEEEEECCCCCCBBCCCTT
T ss_pred CCCceEEEECCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhC-CceEEEEeCCCCEEEEeccCC
Confidence 6899999999999999999999999999999999999999999999999999999998 999999999999999999975
Q ss_pred -ceeecCCCEEEEEEecCCCCccEEEeccCCcccccccCCEEEEeCCeeEEEEEEE--eCCeEEEEEEeCcEeccCcccc
Q 008319 178 -PIILKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSK--TKDLVKCIVVDGGELKSRRHLN 254 (570)
Q Consensus 178 -~i~l~~G~~v~lt~~~~~~~~~~i~v~~~~l~~~v~~Gd~I~iDDG~i~l~V~~~--~~~~i~~~v~~gG~l~s~KgIn 254 (570)
++.|++|+.|+|+.++..++.+.++++|++|++++++||+||+|||+|.|+|+++ +++.+.|+|++||.|+|+||||
T Consensus 81 ~~i~l~~G~~~~l~~~~~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~~i~~~v~~gg~l~~~Kgvn 160 (587)
T 2e28_A 81 GAIELKEGSKLVISMSEVLGTPEKISVTYPSLIDDVSVGAKILLDDGLISLEVNAVDKQAGEIVTTVLNGGVLKNKKGVN 160 (587)
T ss_dssp SCBCCCSSCEEEEESSCCCCCSSEEEBSCTTSTTTCCTTCEEEETTTTEEEEEEEEETTTTEEEEECCSCCCBCSSCBEE
T ss_pred CcEEEecCCEEEEEecCcCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEecCCCeEEEEEecCCEEcCCceee
Confidence 7999999999999886678888999999999999999999999999999999999 8999999999999999999999
Q ss_pred cCCCccCCCCCChhhHHHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCC-CceEEEeecCcchhhhHHHHHHhCCE
Q 008319 255 VRGKSANLPSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNA-DIHVIVKIESADSIPNLHSIISASDG 333 (570)
Q Consensus 255 ~p~~~~~lp~lt~kD~~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~-~i~IiaKIEt~~gv~NldeIl~~sDg 333 (570)
+||..+++|+||++|.+||+|++++|+|+|++|||++++|++++++++++.|. ++.||+|||+++|++|||||++++||
T Consensus 161 lPg~~~~lp~ltekD~~di~~~l~~g~d~v~~sfV~~a~dv~~~~~~l~~~~~~~~~iiakIE~~eav~nldeIl~~~Dg 240 (587)
T 2e28_A 161 VPGVKVNLPGITEKDRADILFGIRQGIDFIAASFVRRASDVLEIRELLEAHDALHIQIIAKIENEEGVANIDEILEAADG 240 (587)
T ss_dssp CTTSCCCCCSCCHHHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHHHHHTTCTTSEEEEEECSHHHHHTHHHHHHHSSE
T ss_pred cCCCcCCCCCCCcccHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHcCCCCceEEEEECCHHHHHhHHHHHHhCCE
Confidence 99999999999999999999999999999999999999999999999999984 89999999999999999999999999
Q ss_pred EEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCC
Q 008319 334 AMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGK 413 (570)
Q Consensus 334 ImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~ 413 (570)
|||||||||+|+|+++|+.+||+|+++|+++|||||+||||||||+++|.|||||++|+|||++||+|++|||+|||.|+
T Consensus 241 ImVargDLgvei~~~~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAE~sDvanav~dG~DavMLSgETA~G~ 320 (587)
T 2e28_A 241 LMVARGDLGVEIPAEEVPLIQKLLIKKSNMLGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAVMLSGETAAGQ 320 (587)
T ss_dssp EEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCS
T ss_pred EEEcCchhhhhcCHHHHHHHHHHHHHHHHHcCCCeEEechhhHhhccCCCccHHHHhccchhhhhCcceeeecccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhcCCCCCCCCCCcccCCCCChhHHHHHHHHHHHhhcCC-cEEEEcCChHHHHHHHhcCCCCeEE
Q 008319 414 FPLKAVKVMHTVALRTESSLPVSITPPTQFSAHKSHMGDMFAFHSTTMANTLNT-PIIVFTRTGSMAVILSHYRPSSTIF 492 (570)
Q Consensus 414 yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a-~Iiv~T~sG~tA~~ls~~RP~~pIi 492 (570)
||+|||++|++||+++|+.+++...+.........+..+++|.+|+++|++++| +||+||.||+||+++|||||.||||
T Consensus 321 yPveaV~~m~~I~~~~E~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~a~~~~a~aIv~~T~sG~ta~~isr~Rp~~pI~ 400 (587)
T 2e28_A 321 YPVEAVKTMHQIALRTEQALEHRDILSQRTKESQTTITDAIGQSVAHTALNLDVAAIVTPTVSGKTPQMVAKYRPKAPII 400 (587)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHTTCSEEEEECSSSHHHHHHHHTCCSSCEE
T ss_pred CHHHHHHHHHHHHHHHhhhhhhhhHhhhhhcccccchHHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHhcCCCCCEE
Confidence 999999999999999999755321111111111135789999999999999999 9999999999999999999999999
Q ss_pred EEeCCHHHHHHhccccCcEEEEecCCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCCCCCCCCCccEEEEEEe
Q 008319 493 AFTNQERIKQRLVLYQGVMPIYMQFSDDVEETFSRAIKLLMDKNLVTKGEFVTLVQSGAQPIWRQESTHHIQVRKV 568 (570)
Q Consensus 493 avt~~~~taRrL~L~rGV~Pil~~~~~d~d~~i~~al~~lke~Gllk~GD~VVvv~G~~~p~~~~G~tn~I~V~~V 568 (570)
|+|++++++|||+|+|||+|+++++..+.+++++.+++++++.|++++||.|++++|. |.+..|.||++++..+
T Consensus 401 a~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~a~~~~~~~G~~k~GD~VVItqG~--P~g~~G~TN~LkI~~V 474 (587)
T 2e28_A 401 AVTSNEAVSRRLALVWGVYTKEAPHVNTTDEMLDVAVDAAVRSGLVKHGDLVVITAGV--PVGETGSTNLMKVHVI 474 (587)
T ss_dssp EEESSHHHHHHGGGSTTEEEEECCCCCSHHHHHHHHHHHHHHHTCCCTTCEEEEEECS--SCSSCCCCCEEEEEEC
T ss_pred EECCCHHHHHHHHHhcCceEEeccccCCHHHHHHHHHHHHHhCCcccccceEEEecCc--ccCcCCCCceEEEEEE
Confidence 9999999999999999999999998889999999999999999999999999999995 6677899999999875
No 9
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=100.00 E-value=7.3e-128 Score=1032.21 Aligned_cols=444 Identities=28% Similarity=0.493 Sum_probs=426.2
Q ss_pred CCCCceEEEecCCCCCCHH--HHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCCcEEEEeecCCCeeeecc
Q 008319 97 ARRKTKIVCTIGPSTSSRE--MIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGD 174 (570)
Q Consensus 97 ~~r~tKIi~TiGPs~~~~e--~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~GpkiR~G~ 174 (570)
++|||||||||||+|+++| +|++|+++ |||||||||||++|+|+++|+++|+++++++ +|++|++||||||||||.
T Consensus 13 ~~r~TKIv~TiGPas~~~e~~~l~~li~a-mnv~RlNfSHg~~e~h~~~i~~iR~~~~~~g-~~vaIl~Dl~GPkIR~g~ 90 (461)
T 3qtg_A 13 ARNLTKRVATLGPSTDVLRPDELIKFLDL-VDGVRINLAHASPNEVKFRIEAVRSYEKAKN-RPLAVIVDLKGPSIRVGS 90 (461)
T ss_dssp CSCSSEEEEECSHHHHTCCHHHHHHHHTT-CSEEEEETTTCCHHHHHHHHHHHHHHHHHHT-CCCEEEEECCCCCCBCCB
T ss_pred ccCCceEEEeeCCCccCchHHHHHHHHHh-CCEEEEECCCCCHHHHHHHHHHHHHHHHHcC-CceEEEEeCCCCEEEECC
Confidence 4799999999999999999 99999999 9999999999999999999999999999998 999999999999999999
Q ss_pred CCCceeecCCCEEEEEEecCCCCccEEEeccCCcccccccCCEEEEeCCeeEEEEEEEeCCeEEEEEEeCcEeccCcccc
Q 008319 175 VPQPIILKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRRHLN 254 (570)
Q Consensus 175 ~~~~i~l~~G~~v~lt~~~~~~~~~~i~v~~~~l~~~v~~Gd~I~iDDG~i~l~V~~~~~~~i~~~v~~gG~l~s~KgIn 254 (570)
+. ++.|++|+.|+|+.++..++ +.++++|++|+++|++||.||+|||+|.|+|++++++.+.|+|++||.|+++||||
T Consensus 91 ~~-~v~L~~G~~~~lt~~~~~~~-~~i~v~y~~l~~~v~~G~~IlidDG~i~l~V~~~~~~~v~~~V~~gG~L~~~KgvN 168 (461)
T 3qtg_A 91 TS-PINVQEGEVVKFKLSDKSDG-TYIPVPNKAFFSAVEQNDVILMLDGRLRLKVTNTGSDWIEAVAESSGVITGGKAIV 168 (461)
T ss_dssp CS-CEEECTTCEEEEEECSBCCS-SSEEECCHHHHHHCCTTCEEEEGGGTEEEEEEEECSSEEEEEESSCEEECTTCBEE
T ss_pred CC-CEEEeCCCEEEEEecCCCCC-cEEEcchHHHHhhcCCCCEEEEeCCEEEEEEEEEECCEEEEEEEECCEecCCCcee
Confidence 94 69999999999999876666 78999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccCCCCCChhhHHHhh--hhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHhCC
Q 008319 255 VRGKSANLPSITDKDWEDIK--FGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASD 332 (570)
Q Consensus 255 ~p~~~~~lp~lt~kD~~dI~--~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sD 332 (570)
+||..+++|.||+||++||+ |++++|+|+|++|||++++|+.++|++|++.|.++.|||||||++|++|+|||++++|
T Consensus 169 lPg~~~~lp~lTekD~~dl~~~~~~~~~vD~Ia~SfVr~a~Dv~~~r~~l~~~g~~~~iiaKIE~~eav~nldeIl~~sD 248 (461)
T 3qtg_A 169 VEGKDYDISTPAEEDVEALKAISPIRDNIDYVAISLAKSCKDVDSVRSLLTELGFQSQVAVKIETKGAVNNLEELVQCSD 248 (461)
T ss_dssp ETTCCCCCCSSCHHHHHHHHHHGGGGGGCCEEEECSCCSHHHHHHHHHHHHHTTCCCEEEEEECSHHHHHTHHHHHHTCS
T ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhhcCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHHhcc
Confidence 99999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCC
Q 008319 333 GAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHG 412 (570)
Q Consensus 333 gImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G 412 (570)
||||||||||+|+|+++|+.+||+|+++|+++|||||+||||||||+++|.|||||++|||||+.||+|++|||+|||.|
T Consensus 249 gImVaRGDLgvei~~e~v~~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAV~dGaDavMLSgETA~G 328 (461)
T 3qtg_A 249 YVVVARGDLGLHYGLDALPIVQRRIVHTSLKYGKPIAVATQLLDSMQSSPIPTRAEINDVFTTASMGVDSLWLTNETASG 328 (461)
T ss_dssp EEEEEHHHHTTTSCTTTHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHTTCSEEEECHHHHTS
T ss_pred cEEEccccccccCCHHHHHHHHHHHHHHHHHhCCCEEEeccchHhhccCCCccHHHHHHHHHHHHhCCcEEEEcccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhcCCCCCCCCCCcccCCCCChhHHHHHHHHHHHhhcCCcEEEEcCChHHHHHHHhcCCCCeEE
Q 008319 413 KFPLKAVKVMHTVALRTESSLPVSITPPTQFSAHKSHMGDMFAFHSTTMANTLNTPIIVFTRTGSMAVILSHYRPSSTIF 492 (570)
Q Consensus 413 ~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~Iiv~T~sG~tA~~ls~~RP~~pIi 492 (570)
+||+|||++|++||+++|+...+. ....+..+++|.+|+++|++++|.||+||.||+||+++|||||.||||
T Consensus 329 ~yPveaV~~m~~I~~~aE~~~~~~--------~~~~~~~~aia~aa~~~a~~~~a~Iv~~T~SG~tA~~vsr~RP~~pIi 400 (461)
T 3qtg_A 329 KYPLAAVSWLSRILMNVEYQIPQS--------PLLQNSRDRFAKGLVELAQDLGANILVFSMSGTLARRIAKFRPRGVVY 400 (461)
T ss_dssp SCHHHHHHHHHHHHHTCCCCCCCC--------CCCCSHHHHHHHHHHHHHHHHTCEEEEECSSSHHHHHHHTTCCSSCEE
T ss_pred CCHHHHHHHHHHHHHHHHhhhhhc--------cCCCCHHHHHHHHHHHHHHhcCCCEEEECCCcHHHHHHHhhCCCCCEE
Confidence 999999999999999999876542 112468899999999999999999899999999999999999999999
Q ss_pred EEeCCHHHHHHhccccCcEEEEecCCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCCCCCCCCCccEEEEE
Q 008319 493 AFTNQERIKQRLVLYQGVMPIYMQFSDDVEETFSRAIKLLMDKNLVTKGEFVTLVQSGAQPIWRQESTHHIQVR 566 (570)
Q Consensus 493 avt~~~~taRrL~L~rGV~Pil~~~~~d~d~~i~~al~~lke~Gllk~GD~VVvv~G~~~p~~~~G~tn~I~V~ 566 (570)
|+|++++++|||+|+|||+|++++ ..+.|++++.++++++++| ||+++|. +|+||+|||+
T Consensus 401 a~T~~~~~~r~l~l~~GV~p~~~~-~~~~d~~~~~a~~~~~~~g-------vvit~g~------p~~TN~~~v~ 460 (461)
T 3qtg_A 401 VGTPNVRVARSLSIVWALEPLYIP-AENYEEGLEKLISLKGTTP-------FVATYGI------RGGVHSVKVK 460 (461)
T ss_dssp EEESCHHHHHHHTTSTTEEEEECC-CSSHHHHHHHHHHHHCCSS-------EEEEECC------TTSCCEEEEE
T ss_pred EeCCCHHHHhhceeccceEEEEeC-CCCHHHHHHHHHHHHHHCC-------EEEEecc------CCCCeEEEEE
Confidence 999999999999999999999998 7889999999999999888 7777774 4799999986
No 10
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=100.00 E-value=4.4e-127 Score=1041.10 Aligned_cols=483 Identities=33% Similarity=0.534 Sum_probs=447.4
Q ss_pred hhhhhccCCCCCCCCCCccCCCCCCCCceEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhh
Q 008319 74 SLSSIFELPNGQCTPGKGVVGPNARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQ 153 (570)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~r~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~ 153 (570)
.++|++.|+. .++ ..+|||||||||||+|+++|+|++|+++||||||||||||++++|+++|+++|+++++
T Consensus 3 ~~~~~~~~~~--------~~~-~~~r~tkIv~TlGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~ir~~~~~ 73 (500)
T 1a3w_A 3 RLERLTSLNV--------VAG-SDLRRTSIIGTIGPKTNNPETLVALRKAGLNIVRMNFSHGSYEYHKSVIDNARKSEEL 73 (500)
T ss_dssp HHHHHHCC--------------CCCCCSBCCEECCGGGCSHHHHHHHHHHTCCSEECBTTSCCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhcCc--------ccc-ccCCCcEEEEEcCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 3678888863 111 4579999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEEEEeecCCCeeeeccCCC--ceeecCCCEEEEEEec---CCCCccEEEeccCCcccccccCCEEEEeCCeeEEE
Q 008319 154 FEDKAVAIMLDTKGPEVRSGDVPQ--PIILKEGQEFNFTIKR---GVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLA 228 (570)
Q Consensus 154 ~~~~~i~I~~Dl~GpkiR~G~~~~--~i~l~~G~~v~lt~~~---~~~~~~~i~v~~~~l~~~v~~Gd~I~iDDG~i~l~ 228 (570)
++++|++|++||||||||||.+.+ ++.|++|+.|+|+.+. ..|+.+.|+++|++|+++|++||.||+|||+|.|+
T Consensus 74 ~~~~~v~il~Dl~GPkiR~g~~~~~~~v~l~~G~~~~lt~~~~~~~~g~~~~v~v~y~~l~~~v~~Gd~ilidDG~i~l~ 153 (500)
T 1a3w_A 74 YPGRPLAIALDTKGPEIRTGTTTNDVDYPIPPNHEMIFTTDDKYAKACDDKIMYVDYKNITKVISAGRIIYVDDGVLSFQ 153 (500)
T ss_dssp CCSSCCCCEEECCCSCCBBCCCSSSSCCCCCSSCEEEEECSSTTTTTCCSSCEEBSCTTHHHHCCTTCEEEETTTTEEEE
T ss_pred cCCcceEEEEeCCCCEEEEeecCCCCceEeecCCEEEEEeCCcccCCCCCcEEEechHHHHhhcCCCCEEEEeCCEEEEE
Confidence 866899999999999999999964 6999999999999875 35788899999999999999999999999999999
Q ss_pred EEEE-eCCeEEEEEEeCcEeccCcccccCCCccCCCCCChhhHHHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCC
Q 008319 229 VKSK-TKDLVKCIVVDGGELKSRRHLNVRGKSANLPSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNA 307 (570)
Q Consensus 229 V~~~-~~~~i~~~v~~gG~l~s~KgIn~p~~~~~lp~lt~kD~~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~ 307 (570)
|+++ +++.+.|+|++||.|+++||||+||..+++|+||++|.+||+|+++.|+|+|++|||++++|++++++++.+.+.
T Consensus 154 V~~~~~~~~v~~~v~~gG~L~~~KgvNlPg~~~~lp~lt~~D~~DI~~~l~~g~d~I~lpfV~saeDv~~~~~~l~~~~~ 233 (500)
T 1a3w_A 154 VLEVVDDKTLKVKALNAGKICSHKGVNLPGTDVDLPALSEKDKEDLRFGVKNGVHMVFASFIRTANDVLTIREVLGEQGK 233 (500)
T ss_dssp CCBCCC--CEEEEBCSCCCCCSSCBEECTTCCCCCCSSCHHHHHHHHHHHHHTCSEEEECSCCSHHHHHHHHHHHHHHHT
T ss_pred EEEEccCCeEEEEEecCCEEeCCCCCcCCCCccCCCCCChhHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCC
Confidence 9999 899999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CceEEEeecCcchhhhHHHHHHhCCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChH
Q 008319 308 DIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRA 387 (570)
Q Consensus 308 ~i~IiaKIEt~~gv~NldeIl~~sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrA 387 (570)
++.||+||||++|++|++||++++|||||||||||+|+|.++++.+|++|+.+|+++|||+|+||||||||+.+|.||||
T Consensus 234 ~i~IiakIEt~eav~nldeI~~~~DgImvgrgDLgvelg~~~v~~aqk~ii~aaraaGkpvi~ATQMLeSMi~~~~ptra 313 (500)
T 1a3w_A 234 DVKIIVKIENQQGVNNFDEILKVTDGVMVARGDLGIEIPAPEVLAVQKKLIAKSNLAGKPVICATQMLESMTYNPRPTRA 313 (500)
T ss_dssp TSEEEEEECSSHHHHSHHHHHHHSSEEEECHHHHHHHTTGGGHHHHHHHHHHHHHHHTCCEEECSSTTGGGGSCSSCCHH
T ss_pred CcEEEEEECChHHHHhHHHHHHhCCEEEECchHhhhhcCcHHHHHHHHHHHHHHHhcCCCEEEEeehhhhhccCCCchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCccc--CCCCChhHHHHHHHHHHHhhc
Q 008319 388 EVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFS--AHKSHMGDMFAFHSTTMANTL 465 (570)
Q Consensus 388 Ev~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~--~~~~~~~~~ia~~av~~a~~~ 465 (570)
|++|++|++.+|+|++|||+|||.|+||+|||++|++||+++|+.+++...+..+.. ....+..+++|.+|+++|+++
T Consensus 314 Evsdva~av~~G~d~vmLs~eta~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~a~~~ 393 (500)
T 1a3w_A 314 EVSDVGNAILDGADCVMLSGETAKGNYPINAVTTMAETAVIAEQAIAYLPNYDDMRNCTPKPTSTTETVAASAVAAVFEQ 393 (500)
T ss_dssp HHHHHHHHHHHTCSEECBSTTTTTCSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTSCCSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEecchhhcchhHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhccccccchHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999997654322221111 111357899999999999999
Q ss_pred CC-cEEEEcCChHHHHHHHhcCCCCeEEEEeCCHHHHHHhccccCcEEEEecC------CCCHHHHHHHHHHHHHHcCCC
Q 008319 466 NT-PIIVFTRTGSMAVILSHYRPSSTIFAFTNQERIKQRLVLYQGVMPIYMQF------SDDVEETFSRAIKLLMDKNLV 538 (570)
Q Consensus 466 ~a-~Iiv~T~sG~tA~~ls~~RP~~pIiavt~~~~taRrL~L~rGV~Pil~~~------~~d~d~~i~~al~~lke~Gll 538 (570)
+| +||+||.||+||+++|||||.|||||+|++++++|||+|+|||+|++++. ..+.+++++.++++++++|++
T Consensus 394 ~a~aIv~~T~sG~ta~~isr~RP~~pI~a~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~~ 473 (500)
T 1a3w_A 394 KAKAIIVLSTSGTTPRLVSKYRPNCPIILVTRCPRAARFSHLYRGVFPFVFEKEPVSDWTDDVEARINFGIEKAKEFGIL 473 (500)
T ss_dssp TCSCEEEECSSSHHHHHHHHTCCSSCEEEEESCTTHHHHGGGSTTEEEEECCSCCCSCTTTHHHHHHHHHHHHHHHTTCS
T ss_pred CCCEEEEECCCchHHHHHHhhCCCCCEEEEcCCHHHHHhhhhhCCeEEEEecccccccccCCHHHHHHHHHHHHHHCCCC
Confidence 99 99999999999999999999999999999999999999999999999875 567899999999999999999
Q ss_pred CCCCEEEEEecCCCCCCCCCCccEEEEEEe
Q 008319 539 TKGEFVTLVQSGAQPIWRQESTHHIQVRKV 568 (570)
Q Consensus 539 k~GD~VVvv~G~~~p~~~~G~tn~I~V~~V 568 (570)
++||.||+++|. |.+ .|+||+|||++|
T Consensus 474 ~~GD~vvv~~g~--~~~-~g~tn~~~v~~v 500 (500)
T 1a3w_A 474 KKGDTYVSIQGF--KAG-AGHSNTLQVSTV 500 (500)
T ss_dssp CTTCEEEEEECC--CTT-TCCCCEEEEEEC
T ss_pred CCcCEEEEEecc--cCC-CCCCceEEEEEC
Confidence 999999999995 656 899999999875
No 11
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=99.71 E-value=4.9e-18 Score=177.69 Aligned_cols=148 Identities=14% Similarity=0.127 Sum_probs=128.2
Q ss_pred HHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhc--------------------------------CCCceEEEeecCc
Q 008319 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSC--------------------------------NADIHVIVKIESA 318 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~--------------------------------~~~i~IiaKIEt~ 318 (570)
.||+++++.|+++|++|||+++++++++++++... +.++.|++||||+
T Consensus 108 ~di~~~LdaGa~gImlP~V~saee~~~~~~~~~~~p~g~Rg~~~~a~~~G~~~~~~~~~~~~y~~~a~~~i~vi~mIEt~ 187 (339)
T 1izc_A 108 VSLSTALDAGAAGIVIPHVETVEEVREFVKEMYYGPIGRRSFSPWTFSPGIADASLFPNDPYNVATSNNHVCIIPQIESV 187 (339)
T ss_dssp HHHHHHHHHTCSEEEETTCCCHHHHHHHHHHHSCTTTCCCCCCSTTCBTTTBCCCSSTTCTTCHHHHHHHCEEEEEECSH
T ss_pred HHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCcccccchhhcccccccccccchhhhhhhcCcCceEEEEEChH
Confidence 58899999999999999999999999999887531 1247899999999
Q ss_pred chhhhHHHHHHh--CCEEEEcCCCcccC--------CCC---CCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcC
Q 008319 319 DSIPNLHSIISA--SDGAMVARGDLGAE--------LPI---EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPT 385 (570)
Q Consensus 319 ~gv~NldeIl~~--sDgImIgrGDLg~e--------ig~---~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~Pt 385 (570)
+|++|+++|+++ +|+++||++||+.+ +|. +.+..++++++.+|+++|||++..+ ..|
T Consensus 188 ~av~nldeIaa~~~vD~l~iG~~DLs~~~~~~~~~~lG~~~~p~v~~a~~~iv~aaraaGk~~g~~~---------~d~- 257 (339)
T 1izc_A 188 KGVENVDAIAAMPEIHGLMFGPGDYMIDAGLDLNGALSGVPHPTFVEAMTKFSTAAQRNGVPIFGGA---------LSV- 257 (339)
T ss_dssp HHHHTHHHHHTCTTCCCEEECHHHHHHHTTCCTTCCTTSCCCHHHHHHHHHHHHHHHHTTCCEEEEC---------SSG-
T ss_pred HHHHHHHHHhcCCCCCEEEECHHHHHhhhhcccchhhCCCCCHHHHHHHHHHHHHHHHhCCceeEec---------CCH-
Confidence 999999999975 99999999999999 887 6799999999999999999997643 233
Q ss_pred hHHHhHHHHHHHhCccEEEecccccC--CCCHHHHHHHHHHHHHHhhcCC
Q 008319 386 RAEVSDIAIAVREGADAVMLSGETAH--GKFPLKAVKVMHTVALRTESSL 433 (570)
Q Consensus 386 rAEv~Dv~nav~~G~D~vmLs~ETA~--G~yP~eaV~~m~~I~~~aE~~~ 433 (570)
.++.+++..|+|+++++.+++. ..| .+.|+++++|+.++|...
T Consensus 258 ----~~a~~~~~~Gf~~l~~~~di~~l~~~~-~~~v~~a~~iv~a~e~~~ 302 (339)
T 1izc_A 258 ----DMVPSLIEQGYRAIAVQFDVWGLSRLV-HGSLAQARASAKQFAGQG 302 (339)
T ss_dssp ----GGHHHHHHTTEEEEEEEEHHHHHHHHH-HHHHHHHHHHHGGGCC--
T ss_pred ----HHHHHHHHhCCCEEEecHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 4678899999999999999875 666 799999999999999753
No 12
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=99.66 E-value=3.9e-18 Score=172.85 Aligned_cols=126 Identities=23% Similarity=0.289 Sum_probs=104.1
Q ss_pred hHHHhhhhhhcCCcEEEecCCCChhHHHHHHHHHH---------------------------hcCCCceEEEeecCcchh
Q 008319 269 DWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLK---------------------------SCNADIHVIVKIESADSI 321 (570)
Q Consensus 269 D~~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~---------------------------~~~~~i~IiaKIEt~~gv 321 (570)
|..+|+++++.|+++|.+|||++++|++++.+.+. ..+.++.+++||||++|+
T Consensus 79 ~~~~i~~~l~~g~~~I~~P~V~s~ee~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~v~~~IEt~~av 158 (267)
T 2vws_A 79 SKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTAL 158 (267)
T ss_dssp CHHHHHHHHHTTCCEEEECCCCSHHHHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEECCSHHHH
T ss_pred CHHHHHHHHHhCCCEEEeCCCCCHHHHHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccEEEEEECCHHHH
Confidence 34778899999999999999999999998877652 122358899999999999
Q ss_pred hhHHHHHHh--CCEEEEcCCCcccCCCC------CCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHH
Q 008319 322 PNLHSIISA--SDGAMVARGDLGAELPI------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIA 393 (570)
Q Consensus 322 ~NldeIl~~--sDgImIgrGDLg~eig~------~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~ 393 (570)
+|++||+++ +|+++||++||+.++|. +.+..++++++.+|+++|||+++. . ..|. ...
T Consensus 159 ~~~~eIa~~~gvd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~~v~-------~--~d~~-----~a~ 224 (267)
T 2vws_A 159 DNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFL-------A--VAPD-----MAQ 224 (267)
T ss_dssp HTHHHHHTSTTCCEEEECHHHHHHHTTCSSSCCTHHHHHHHHHHHHHHHHTTCEEEEE-------C--SSHH-----HHH
T ss_pred HHHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCeEEEe-------c--CCHH-----HHH
Confidence 999999988 99999999999999997 458899999999999999999873 1 2232 344
Q ss_pred HHHHhCccEEEeccc
Q 008319 394 IAVREGADAVMLSGE 408 (570)
Q Consensus 394 nav~~G~D~vmLs~E 408 (570)
.++..|++.+.++.+
T Consensus 225 ~~~~~G~~~~s~~~d 239 (267)
T 2vws_A 225 QCLAWGANFVAVGVD 239 (267)
T ss_dssp HHHHTTCCEEEEEEH
T ss_pred HHHHCCCCEEEEchH
Confidence 567788887777654
No 13
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=99.65 E-value=5.6e-18 Score=173.52 Aligned_cols=127 Identities=24% Similarity=0.252 Sum_probs=104.0
Q ss_pred hHHHhhhhhhcCCcEEEecCCCChhHHHHHHHHHH---------------------------hcCCCceEEEeecCcchh
Q 008319 269 DWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLK---------------------------SCNADIHVIVKIESADSI 321 (570)
Q Consensus 269 D~~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~---------------------------~~~~~i~IiaKIEt~~gv 321 (570)
|..||+++++.|+++|++|||++++|++++.+.+. ..+.++.+++||||++|+
T Consensus 100 d~~di~~~ld~ga~~ImlP~V~saeea~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mIEt~~av 179 (287)
T 2v5j_A 100 DPVQIKQLLDVGTQTLLVPMVQNADEAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETREAM 179 (287)
T ss_dssp CHHHHHHHHHTTCCEEEESCCCSHHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSHHHH
T ss_pred CHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEEEEEECcHHHH
Confidence 44589999999999999999999999998877542 223358899999999999
Q ss_pred hhHHHHHHh--CCEEEEcCCCcccCCCC------CCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHH
Q 008319 322 PNLHSIISA--SDGAMVARGDLGAELPI------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIA 393 (570)
Q Consensus 322 ~NldeIl~~--sDgImIgrGDLg~eig~------~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~ 393 (570)
+|+++|+++ +|+++||++||+.++|. +++..++++++.+|+++|||+++. ...|. ...
T Consensus 180 ~n~deIaa~~~vD~l~iG~~DLs~~lg~~~~~~~p~v~~a~~~iv~aaraaG~~~gv~---------~~d~~-----~a~ 245 (287)
T 2v5j_A 180 KNLPQILDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGIL---------IANEQ-----LAK 245 (287)
T ss_dssp HTHHHHHTSTTEEEEEECHHHHHHHTTSTTCCCSHHHHHHHHHHHHHHHHTTSEEEEE---------CCCHH-----HHH
T ss_pred HHHHHHhCcCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHcCCeeEEe---------cCCHH-----HHH
Confidence 999999985 99999999999999997 468899999999999999999863 22343 334
Q ss_pred HHHHhCccEEEecccc
Q 008319 394 IAVREGADAVMLSGET 409 (570)
Q Consensus 394 nav~~G~D~vmLs~ET 409 (570)
.++..|++.+.++.++
T Consensus 246 ~~~~~G~~~~s~~~d~ 261 (287)
T 2v5j_A 246 RYLELGALFVAVGVDT 261 (287)
T ss_dssp HHHHTTCSEEEEEEHH
T ss_pred HHHHhCCCEEEECcHH
Confidence 5677777777776543
No 14
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=99.61 E-value=6.9e-16 Score=155.99 Aligned_cols=127 Identities=20% Similarity=0.263 Sum_probs=108.2
Q ss_pred HHhhhhhhcCCcEEEecCCCChhHHHHHHHHH---------------------------HhcCCCceEEEeecCcchhhh
Q 008319 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYL---------------------------KSCNADIHVIVKIESADSIPN 323 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l---------------------------~~~~~~i~IiaKIEt~~gv~N 323 (570)
.||+++++.|+|+|.+|||++++|++++.+++ +..+.++.++++|||++|+.|
T Consensus 79 ~di~~~ld~G~~gI~lP~v~saed~~~~~~~~~~~p~G~Rg~~~~r~~~~g~~~~~~y~~~~~~~~~v~~mIEt~~av~~ 158 (261)
T 3qz6_A 79 AHVQRLLDIGAEGFMIPGVQSAETMRETVRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQERNDEIFIMAQIEHVKAVED 158 (261)
T ss_dssp HHHHHHHHHTCCEEEETTCCSHHHHHHHHHHHSCTTTCCCCCCCGGGGTTCCCCHHHHHHHHHTTCEEEEEECCHHHHHT
T ss_pred HHHHHHHhcCCCEEEECCcCCHHHHHHHHHHhccCCCCCcCcccchhhhccccchhhHHhcCCCCeEEEEEECCHHHHHH
Confidence 58999999999999999999999999887765 233567899999999999999
Q ss_pred HHHHHHh--CCEEEEcCCCcccCCCCC------CHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHH
Q 008319 324 LHSIISA--SDGAMVARGDLGAELPIE------DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIA 395 (570)
Q Consensus 324 ldeIl~~--sDgImIgrGDLg~eig~~------~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~na 395 (570)
+++|+++ +|+++||++||+.++|.. .+..++++++.+|+++|||+++.+ ..|..++ ...
T Consensus 159 ~~eIaa~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~g~~~---------~~~~~~~----~~~ 225 (261)
T 3qz6_A 159 IDSILAVQGVDAVIFGPRDLSNDLGIIGQTEHPKVYECYEKVYRAADRQGVVKGFFT---------AADAAKM----GWA 225 (261)
T ss_dssp HHHHHTSTTCCEEEECHHHHHHHTTCTTCTTCHHHHHHHHHHHHHHHHHTCEEEEEE---------SSCGGGG----HHH
T ss_pred HHHHhCCCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEe---------CCHHHHH----HHH
Confidence 9999965 999999999999999873 689999999999999999998752 3455442 356
Q ss_pred HHhCccEEEeccccc
Q 008319 396 VREGADAVMLSGETA 410 (570)
Q Consensus 396 v~~G~D~vmLs~ETA 410 (570)
+..|++.+.++.++.
T Consensus 226 ~~~G~~~~s~~~D~~ 240 (261)
T 3qz6_A 226 VERGAQMLLWSGDVA 240 (261)
T ss_dssp HHTTCCEEEEEEHHH
T ss_pred HHCCCCEEEEhhHHH
Confidence 889999999887754
No 15
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=99.61 E-value=6.2e-17 Score=162.96 Aligned_cols=127 Identities=24% Similarity=0.294 Sum_probs=106.4
Q ss_pred hHHHhhhhhhcCCcEEEecCCCChhHHHHHHHHHH--------------------------hcCCCceEEEeecCcchhh
Q 008319 269 DWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLK--------------------------SCNADIHVIVKIESADSIP 322 (570)
Q Consensus 269 D~~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~--------------------------~~~~~i~IiaKIEt~~gv~ 322 (570)
|...|+.+++.|+++|.+|||++++|++.+.+++. ..+.++.+++||||++|+.
T Consensus 80 ~~~~i~~~l~~g~~gI~~P~V~s~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v~~~IEt~~av~ 159 (256)
T 1dxe_A 80 EPVIIKRLLDIGFYNFLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVD 159 (256)
T ss_dssp CHHHHHHHHHTTCCEEEESCCCSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEECSHHHHH
T ss_pred CHHHHHHHHhcCCceeeecCcCCHHHHHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEEEEEECCHHHHH
Confidence 44558889999999999999999999999887763 2346789999999999999
Q ss_pred hHHHHHHh--CCEEEEcCCCcccCCCC------CCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHH
Q 008319 323 NLHSIISA--SDGAMVARGDLGAELPI------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI 394 (570)
Q Consensus 323 NldeIl~~--sDgImIgrGDLg~eig~------~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~n 394 (570)
|+++|+++ +|+++||++||+.++|. +.+..++++++.+|+++|||+++.+ ..|. +...
T Consensus 160 ~~~eIa~~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~a~G~~~~v~~---------~d~~-----~~~~ 225 (256)
T 1dxe_A 160 NVDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILA---------PVEA-----DARR 225 (256)
T ss_dssp THHHHHTSTTCCEEEECHHHHHHHTTCTTCTTSHHHHHHHHHHHHHHHHTTCCEEEEC---------CSHH-----HHHH
T ss_pred hHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCceEEec---------CCHH-----HHHH
Confidence 99999985 99999999999999997 3588999999999999999998631 1222 3456
Q ss_pred HHHhCccEEEecccc
Q 008319 395 AVREGADAVMLSGET 409 (570)
Q Consensus 395 av~~G~D~vmLs~ET 409 (570)
++..|++.+.++.++
T Consensus 226 ~~~~G~~~~s~~~d~ 240 (256)
T 1dxe_A 226 YLEWGATFVAVGSDL 240 (256)
T ss_dssp HHHTTCCEEEEEEHH
T ss_pred HHHcCCCEEEechHH
Confidence 788899988887654
No 16
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=99.54 E-value=1.8e-14 Score=146.92 Aligned_cols=134 Identities=10% Similarity=0.062 Sum_probs=111.2
Q ss_pred CCCC-hhhHHHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHH--hCCEEEEcCC
Q 008319 263 PSIT-DKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS--ASDGAMVARG 339 (570)
Q Consensus 263 p~lt-~kD~~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~--~sDgImIgrG 339 (570)
+.++ +++.+||+.+++ |+|+|.+|||+++++++.+.+++...|.++.++++|||++|+.|+++|+. .+|++++|++
T Consensus 76 ~~~~~~~~~~dl~~~l~-g~~~i~lPkv~s~~~v~~~~~~l~~~g~~~~i~~~IEt~~av~~~~eIa~~~~vd~l~iG~~ 154 (284)
T 1sgj_A 76 NALHSPYFEDDLSVLTP-ELSGVVVPKLEMGAEARQVAQMLQERSLPLPILAGLETGAGVWNAREIMEVPEVAWAYFGAE 154 (284)
T ss_dssp CCTTSTTHHHHGGGCCT-TSSEEEECSCCSHHHHHHHHHHHHHTTCCCCEEEEECSHHHHHTHHHHHTSTTEEEEEECHH
T ss_pred CCCCCHhHHHHHHHHhc-cCCEEEeCCCCCHHHHHHHHHHHHhcCCCeEEEEEecCHHHHHHHHHHHcCCCCcEEEECHH
Confidence 4444 678899999999 99999999999999999999999877778999999999999999999997 3899999999
Q ss_pred CcccCCCC------CCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHH--HhHHHHHHHhCccEEEe
Q 008319 340 DLGAELPI------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE--VSDIAIAVREGADAVML 405 (570)
Q Consensus 340 DLg~eig~------~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAE--v~Dv~nav~~G~D~vmL 405 (570)
||+.++|. +.+..++++++.+|+++|||++.. ..+...-.+ ..+...+...|+|+-+.
T Consensus 155 DL~~~lg~~~~~~~~~~~~a~~~iv~aa~a~G~~~i~~--------v~~~~~d~~~l~~~~~~~~~~Gf~Gk~~ 220 (284)
T 1sgj_A 155 DYTTDLGGKRTPGGLEVLYARSQVALAARLTGVAALDI--------VVTALNDPETFRADAEQGRALGYSGKLC 220 (284)
T ss_dssp HHHHHHTCCCCSSCGGGHHHHHHHHHHHHHHTCEEEEC--------CCCCCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHhCCCCCCChHHHHHHHHHHHHHHHHcCCCeeeC--------CcCCCCCHHHHHHHHHHHHhCCCCcccc
Confidence 99999998 579999999999999999998632 011111111 24567788999986554
No 17
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=99.28 E-value=5.3e-12 Score=131.31 Aligned_cols=133 Identities=16% Similarity=0.152 Sum_probs=108.6
Q ss_pred CCCChhhHHHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHh-------c----CCCceEEEeecCcchhhhHHHHHHhC
Q 008319 263 PSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKS-------C----NADIHVIVKIESADSIPNLHSIISAS 331 (570)
Q Consensus 263 p~lt~kD~~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~-------~----~~~i~IiaKIEt~~gv~NldeIl~~s 331 (570)
|.+...|.+.|..+.+.|.+.|.+|+|++++++.++++.+.. . +.++.+++||||+.|+.|+++|++++
T Consensus 118 p~~~~~ql~Ai~ra~~~G~~~ImvPmV~s~~E~~~a~~~v~~~~~~~r~~G~~~~~~~~vg~mIEtp~av~~~d~Ia~~v 197 (324)
T 2xz9_A 118 PDIFKTQLRAILRASAYGNVQIMYPMISSVEEVRKANSILEEVKAELDREGVKYDKEIKVGIMVEIPSAAVTADILAKEV 197 (324)
T ss_dssp HHHHHHHHHHHHHHGGGSCEEEEECSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCTTCEEEEEECSHHHHHTHHHHTTTC
T ss_pred hhhHHHHHHHHHHHHhCCCCEEEEcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHHhC
Confidence 455667778888888999999999999999999888887742 1 23689999999999999999999999
Q ss_pred CEEEEcCCCccc-CCCC---------------CCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHH
Q 008319 332 DGAMVARGDLGA-ELPI---------------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIA 395 (570)
Q Consensus 332 DgImIgrGDLg~-eig~---------------~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~na 395 (570)
|+++||+.||+. .++. +.|..+.++++.+|+++|||+++++++ ...| ..+..+
T Consensus 198 D~~siGtnDLtq~~lg~dR~~~~~~~~~~~~~p~v~~ai~~vv~aar~aG~~vgvcge~------~~dp-----~~~~~l 266 (324)
T 2xz9_A 198 DFFSIGTNDLTQYTLAVDRMNEHVKEYYQPFHPAILRLVKMVIDAAHKEGKFAAMCGEM------AGDP-----LAAVIL 266 (324)
T ss_dssp SEEEECHHHHHHHHTTCCTTCGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSGG------GGCH-----HHHHHH
T ss_pred cEEEECHHHHHHHHhCCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHCCceeecCcc------CCCH-----HHHHHH
Confidence 999999999995 3442 357788899999999999999987653 1123 335567
Q ss_pred HHhCccEEEec
Q 008319 396 VREGADAVMLS 406 (570)
Q Consensus 396 v~~G~D~vmLs 406 (570)
+..|+|.+.++
T Consensus 267 ~~lG~~~~si~ 277 (324)
T 2xz9_A 267 LGLGLDEFSMS 277 (324)
T ss_dssp HHHTCCEEEEC
T ss_pred HHCCCCEEEEC
Confidence 89999997665
No 18
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=99.16 E-value=5.6e-11 Score=123.21 Aligned_cols=133 Identities=20% Similarity=0.210 Sum_probs=105.9
Q ss_pred ChhhHHHhhhhhhcCC--cEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh---CCEEEEcCCC
Q 008319 266 TDKDWEDIKFGVDNQV--DFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA---SDGAMVARGD 340 (570)
Q Consensus 266 t~kD~~dI~~~~~~gv--d~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~---sDgImIgrGD 340 (570)
|++-.+||+..++.|. |+|.+|+|++++++..+.+++...+.++.++++|||++|+.|+++|++. +|++++|+.|
T Consensus 113 t~~~~~Dl~~~l~~g~~~~gIvlPKvesa~~v~~~~~~l~~~~~~~~l~~~IET~~gv~~~~eIa~a~~~v~~l~~G~~D 192 (316)
T 3qll_A 113 TRAGIEDIHALLECGSLPDYLVLPKTESAAHLQILDRLMMFAGSDTRLIGIIESVRGLNAVESIAAATPKLAGLIFGAAD 192 (316)
T ss_dssp SHHHHHHHHHHHHSCCCCSEEEETTCCSHHHHHHHHHHTSCC--CCEEEEEECSHHHHHTHHHHHTSCTTEEEEEECHHH
T ss_pred CchhHHHHHHHHhCCCCCCEEEeCCCCCHHHHHHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHHHhcCCCceEEEECHHH
Confidence 4666788988888874 9999999999999999999998777789999999999999999999983 7899999999
Q ss_pred cccCCCCC----CHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChH-HHhHHHHHHHhCccEEEe
Q 008319 341 LGAELPIE----DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRA-EVSDIAIAVREGADAVML 405 (570)
Q Consensus 341 Lg~eig~~----~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrA-Ev~Dv~nav~~G~D~vmL 405 (570)
|+.++|.. .+..+..+++.+|+++|++++.. .....-... -..+...+...|+++-+.
T Consensus 193 L~~~lG~~~~~~~l~~ar~~iv~AaraaGi~~id~-------v~~~~~D~~gl~~e~~~~r~lGf~Gk~~ 255 (316)
T 3qll_A 193 MAADIGAASTWEPLALARARLVSACAMNGIPAIDA-------PFFDVHDVSGLQSETLRASDFGFSAKAA 255 (316)
T ss_dssp HHHHHTCCSSHHHHHHHHHHHHHHHHHHTCCEEEC-------CCSCSSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHhCCCCCcHHHHHHHHHHHHHHHHcCCceeec-------cccCcCCHHHHHHHHHHHHHCCCCeEEe
Confidence 99999974 46677889999999999998542 111111110 145677888999987554
No 19
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A
Probab=99.11 E-value=1.8e-10 Score=117.01 Aligned_cols=125 Identities=18% Similarity=0.105 Sum_probs=99.8
Q ss_pred ChhhHHHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh--CCEEEEcCCCccc
Q 008319 266 TDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGA 343 (570)
Q Consensus 266 t~kD~~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~--sDgImIgrGDLg~ 343 (570)
|++-.+||+..++.|+|+|.+|+|+++++++.+. .+.++++|||++|+.|++||+.. +|++++|+.||+.
T Consensus 70 ~~~~~~dl~~~~~~g~~gi~lPKv~s~~~v~~~~--------~~~i~~~IET~~~v~~~~eIaa~~~v~~l~~G~~Dl~~ 141 (273)
T 1u5h_A 70 TADQARDLEALAGTAYTTVMLPKAESAAQVIELA--------PRDVIALVETARGAVCAAEIAAADPTVGMMWGAEDLIA 141 (273)
T ss_dssp CHHHHHHHHHHHTSCCCEEEETTCCCHHHHHTTT--------TSEEEEEECSHHHHHTHHHHHHSTTEEEEEECHHHHHH
T ss_pred chHHHHHHHHHHhcCCCEEEeCCCCCHHHHHHHh--------hCCEEEEEeCHHHHHhHHHHhcCCCCcEEEecHHHHHH
Confidence 3455688888899999999999999999998763 78899999999999999999965 7899999999999
Q ss_pred CCCCC-----------CHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHH-HhHHHHHHHhCccEEEe
Q 008319 344 ELPIE-----------DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVML 405 (570)
Q Consensus 344 eig~~-----------~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmL 405 (570)
++|.. .+..+..+++.+|+++|++++.. ......+.+. ..+...+...|+|+-+.
T Consensus 142 ~lG~~~~~~~~~~~~~~~~~a~~~iv~aaraaG~~aid~-------v~~~~~d~~gl~~~~~~~~~~Gf~Gk~~ 208 (273)
T 1u5h_A 142 TLGGSSSRRADGAYRDVARHVRSTILLAASAFGRLALDA-------VHLDILDVEGLQEEARDAAAVGFDVTVC 208 (273)
T ss_dssp HHTCSCSBCTTSCBCHHHHHHHHHHHHHHHHTTCEEEEC-------CCSCTTCHHHHHHHHHHHHHHTCSEEEE
T ss_pred HhCCCCCCCccccccHHHHHHHHHHHHHHHHcCCCcccC-------CcCCCCCHHHHHHHHHHHHhCCCCceee
Confidence 99863 26677789999999999988632 1111111111 34677888999998776
No 20
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha}
Probab=99.07 E-value=3e-10 Score=118.53 Aligned_cols=133 Identities=13% Similarity=0.048 Sum_probs=101.2
Q ss_pred ChhhHHHhhhhhhc---CCcEEEecCCCChhHHHHHHHHHHhc----C--CCceEEEeecCcchhhhHHHHHHh--CCEE
Q 008319 266 TDKDWEDIKFGVDN---QVDFYAVSFVKDAKVVHELKDYLKSC----N--ADIHVIVKIESADSIPNLHSIISA--SDGA 334 (570)
Q Consensus 266 t~kD~~dI~~~~~~---gvd~I~~SfV~sa~dv~~vr~~l~~~----~--~~i~IiaKIEt~~gv~NldeIl~~--sDgI 334 (570)
|++-.+||...++. |+|+|.+|+|++++|+..+.+++... | ..+.++++|||++|+.|+++|++. +|++
T Consensus 94 t~~~~~DL~av~~~~~~g~dgI~LPKvesa~dv~~~~~~l~~~e~~~G~~~~i~l~~~IET~~gv~~~~eIaa~~rv~~L 173 (332)
T 3qqw_A 94 HPAWRQDVDIIVNGAGGRLAYITVPKATNSGQVAEVIRYIGDVAKRAGLDKPVPVHVLIETHGALRDVFQIAELPNIEVL 173 (332)
T ss_dssp STTHHHHHHHHHHHSTTCCCCEEECCCCSHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHTTSTTEEEE
T ss_pred ChHHHHHHHHHHhhcccCCCEEEeCCCCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEecCHHHHHHHHHHhcCcCCCEE
Confidence 44556777766665 99999999999999999998887543 2 468899999999999999999954 7899
Q ss_pred EEcCCCcccCCCCC---------------CHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHH-HhHHHHHH-H
Q 008319 335 MVARGDLGAELPIE---------------DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAV-R 397 (570)
Q Consensus 335 mIgrGDLg~eig~~---------------~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav-~ 397 (570)
++|+.||+.++|.. .+..+..+++.+|+++|+++|.. .........- ..+...+. .
T Consensus 174 ~~G~~DL~~~lg~~~~~~~~~~~g~~~~p~l~~ar~~vv~AAraaGi~~id~-------v~~d~~D~~gl~~~~~~~~~~ 246 (332)
T 3qqw_A 174 DFGLMDFVSGHHGAIPAAAMRSPGQFEHALLVRAKADMVAAALANGIVPAHN-------VCLNLKDAEVIASDACRARNE 246 (332)
T ss_dssp EECHHHHHHTTTTCSCGGGGSTTGGGTSHHHHHHHHHHHHHHHHTTCEEEEC-------CCSCSSCHHHHHHHHHHHHHH
T ss_pred EEcHHHHHHHhCCCccccccCCCCcccCHHHHHHHHHHHHHHHHhCCCcccC-------CcccccCHHHHHHHHHHHHHh
Confidence 99999999998762 15667789999999999998642 1111111111 24466777 7
Q ss_pred hCccEEEe
Q 008319 398 EGADAVML 405 (570)
Q Consensus 398 ~G~D~vmL 405 (570)
.|+|+-+.
T Consensus 247 lGf~Gk~~ 254 (332)
T 3qqw_A 247 FGFLRMWS 254 (332)
T ss_dssp HCCCEEEE
T ss_pred CCCCcccc
Confidence 89997654
No 21
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=99.01 E-value=4e-10 Score=129.65 Aligned_cols=134 Identities=18% Similarity=0.178 Sum_probs=110.3
Q ss_pred CChhhHHHhhhhhh-cC--CcEEEecCCCChhHHHHHHHHHHhcCC----C-ceEEEeecCcchhhhHHHHHHhCCEEEE
Q 008319 265 ITDKDWEDIKFGVD-NQ--VDFYAVSFVKDAKVVHELKDYLKSCNA----D-IHVIVKIESADSIPNLHSIISASDGAMV 336 (570)
Q Consensus 265 lt~kD~~dI~~~~~-~g--vd~I~~SfV~sa~dv~~vr~~l~~~~~----~-i~IiaKIEt~~gv~NldeIl~~sDgImI 336 (570)
+.+.+.+.|..+.+ .| .+.|++|||+++++++.+++.+...+. + +.+++||||+.|+.|+|+|++++|+++|
T Consensus 622 ~~~~ql~Ai~ra~~~~G~~~~~ImvP~V~t~~E~~~~~~~l~~~g~~~~~~~~~vg~MIEtp~a~~~ad~ia~~vD~~si 701 (794)
T 2ols_A 622 CFALECKALKRVRDEMGLTNVEIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCELPSNAVLAEQFLQYFDGFSI 701 (794)
T ss_dssp HHHHHHHHHHHHHHTSCCTTEEEEECCCCSHHHHHHHHHHHHHTTCCTTGGGCCEEEEECSHHHHHTHHHHHTTSSEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCCCCHHHHHHHHHHHHhcCcccCccCCEEEEEECcHHHHHHHHHHHHhCCEEEE
Confidence 44556677778888 68 789999999999999999999876653 3 8899999999999999999999999999
Q ss_pred cCCCcccC-CCCC---------------CHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCc
Q 008319 337 ARGDLGAE-LPIE---------------DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGA 400 (570)
Q Consensus 337 grGDLg~e-ig~~---------------~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~ 400 (570)
|+.||+.. +|++ .|..+.++++.+|+++|||++++.++-- ..|. .+..++..|+
T Consensus 702 GtnDLtq~tlg~~R~~~~~~~~~~~~~p~v~~~i~~~v~aar~~g~~vgicGe~~~-----~dp~-----~~~~~~~~G~ 771 (794)
T 2ols_A 702 GSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAISACRKQNKYVGICGQGPS-----DHPD-----FAKWLVEEGI 771 (794)
T ss_dssp EHHHHHHHHHTCCTTCTTTGGGCCTTSHHHHHHHHHHHHHHHTTTCEEEEESSHHH-----HCHH-----HHHHHHHHTC
T ss_pred CHHHHHHHHhCCCCCcchhccccCCCCHHHHHHHHHHHHHHHHhCCEEEEecccCC-----CCHH-----HHHHHHHCCC
Confidence 99999997 7753 4788889999999999999999866321 0121 2556789999
Q ss_pred cEEEeccc
Q 008319 401 DAVMLSGE 408 (570)
Q Consensus 401 D~vmLs~E 408 (570)
|.+.++..
T Consensus 772 ~~~s~~p~ 779 (794)
T 2ols_A 772 ESVSLNPD 779 (794)
T ss_dssp CEEEECGG
T ss_pred CEEEECHh
Confidence 99988633
No 22
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans}
Probab=98.97 E-value=1.7e-09 Score=113.17 Aligned_cols=132 Identities=10% Similarity=0.112 Sum_probs=97.1
Q ss_pred hhhHHHhhhhhhc---CCcEEEecCCCChhHHHHHHHHHHhc----C--CCceEEEeecCcchhhhHHHHHHh--CCEEE
Q 008319 267 DKDWEDIKFGVDN---QVDFYAVSFVKDAKVVHELKDYLKSC----N--ADIHVIVKIESADSIPNLHSIISA--SDGAM 335 (570)
Q Consensus 267 ~kD~~dI~~~~~~---gvd~I~~SfV~sa~dv~~vr~~l~~~----~--~~i~IiaKIEt~~gv~NldeIl~~--sDgIm 335 (570)
++-.+||...++. |+|+|.+|+|++++|+..+.+++... | ..+.++++|||+.|+.|+++|++. +|+++
T Consensus 94 ~~~~~DL~al~~~~~~g~~~I~LPKves~~dv~~~~~~l~~~e~~~G~~~~~~l~~~IET~~gv~~~~eIAa~~rv~~L~ 173 (339)
T 3r4i_A 94 AHWRDDVRLILRAAKRAPAYITLPKIRHVHDAAEMVAFIEATRRELGIAQPVPVQLLVETHGALTRVFDLAALPGVEALS 173 (339)
T ss_dssp TTHHHHHHHHHHHCSSCCSCEEECC-CCHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHHTCTTEEEEE
T ss_pred cHHHHHHHHhhhhccCCCCEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeccHHHHHhHHHHHcCcCCCEEE
Confidence 3455667666554 89999999999999999988887543 2 368899999999999999999954 89999
Q ss_pred EcCCCcccCCCCC---------------CHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHH-HhHHHHHH-Hh
Q 008319 336 VARGDLGAELPIE---------------DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAV-RE 398 (570)
Q Consensus 336 IgrGDLg~eig~~---------------~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav-~~ 398 (570)
+|+.||+.++|.. .+..+..+++.+|+++|++++.. .....-..+- ..+...+. ..
T Consensus 174 ~G~~DL~~~lg~~~~~~~~~~~~~~~~p~~~~a~~~iv~AAraaGi~~id~-------v~~d~~D~~gl~~~~~~~~~~l 246 (339)
T 3r4i_A 174 FGLMDFVSAHDGAIPDTAMRSPGQFDHPLVRRAKLEISAACHAYGKVPSHN-------VSTEVRDMSVVANDAARARNEF 246 (339)
T ss_dssp ECHHHHHHTTTTSSCGGGGSTTHHHHSHHHHHHHHHHHHHHHHTTCEEEEC-------CCCCSSCHHHHHHHHHHHHHTT
T ss_pred ECHHHHHHHhCCCcCccccCCCccccCHHHHHHHHHHHHHHHHcCCCCccC-------CCcCCCChHHHHHHHHHHHHhC
Confidence 9999999998752 15567789999999999998642 1111111111 23445565 68
Q ss_pred CccEEEe
Q 008319 399 GADAVML 405 (570)
Q Consensus 399 G~D~vmL 405 (570)
|+|+-+.
T Consensus 247 Gf~Gk~~ 253 (339)
T 3r4i_A 247 GYTRMWS 253 (339)
T ss_dssp CCSEEEE
T ss_pred CCCccee
Confidence 9997554
No 23
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A
Probab=98.93 E-value=1.5e-09 Score=120.69 Aligned_cols=133 Identities=13% Similarity=0.075 Sum_probs=108.0
Q ss_pred CCCChhhHHHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHh-------cC----CCceEEEeecCcchhhhHHHHHHhC
Q 008319 263 PSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKS-------CN----ADIHVIVKIESADSIPNLHSIISAS 331 (570)
Q Consensus 263 p~lt~kD~~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~-------~~----~~i~IiaKIEt~~gv~NldeIl~~s 331 (570)
|.+...+.+.|..+.+.|...|++|+|+++++++.+++.+.. .| .++.+.+|||++.|+.++|+|++.+
T Consensus 367 p~if~~QlrAi~rA~~~G~~~Im~PmV~t~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~v 446 (575)
T 2hwg_A 367 REILRDQLRAILRASAFGKLRIMFPMIISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKEV 446 (575)
T ss_dssp HHHHHHHHHHHHHHTTSSCEEEEESSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCTTCEEEEEECSHHHHHTHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHHhC
Confidence 445555667788888899999999999999998888877642 23 3688999999999999999999999
Q ss_pred CEEEEcCCCccc----------CCCC------CCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHH
Q 008319 332 DGAMVARGDLGA----------ELPI------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIA 395 (570)
Q Consensus 332 DgImIgrGDLg~----------eig~------~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~na 395 (570)
|++.||+.||+. .++. +.|..+.++++.+|+++|||++++.+ | ...|.. +..+
T Consensus 447 Df~siGtNDLtqy~la~dR~~~~l~~~~dp~~paVl~li~~vv~aa~~~g~~vgvCGe----~--agdp~~-----~~~l 515 (575)
T 2hwg_A 447 DFFSIGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGMCGE----L--AGDERA-----TLLL 515 (575)
T ss_dssp SEEEECHHHHHHHHHTCCTTCGGGGGGCCSSSHHHHHHHHHHHHHHHHTTCEEEECST----T--TTCTTT-----HHHH
T ss_pred CEEEECHHHHHHHHhCcCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEEeCC----C--CCCHHH-----HHHH
Confidence 999999999998 4432 45778889999999999999998755 2 224433 4467
Q ss_pred HHhCccEEEec
Q 008319 396 VREGADAVMLS 406 (570)
Q Consensus 396 v~~G~D~vmLs 406 (570)
+..|+|.+.++
T Consensus 516 ~~lG~~~~S~~ 526 (575)
T 2hwg_A 516 LGMGLDEFSMS 526 (575)
T ss_dssp HHTTCCEEEEC
T ss_pred HHCCCCEEEEC
Confidence 89999997665
No 24
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A
Probab=98.91 E-value=1.8e-09 Score=119.96 Aligned_cols=132 Identities=16% Similarity=0.086 Sum_probs=105.4
Q ss_pred CCChhhHHHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHh-----------cCCCceEEEeecCcchhhhHHHHHHhCC
Q 008319 264 SITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKS-----------CNADIHVIVKIESADSIPNLHSIISASD 332 (570)
Q Consensus 264 ~lt~kD~~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~-----------~~~~i~IiaKIEt~~gv~NldeIl~~sD 332 (570)
.+..-+.+.|..+.+.|...|++|+|+++++++.+++++.. .+.++.+.+|||++.|+.++|+|++++|
T Consensus 370 ~if~~QlrAi~rA~~~G~~~Im~PmV~s~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~vD 449 (572)
T 2wqd_A 370 DIFRPQLRALLRASVYGKLNIMFPMVATINEFREAKAILLEEKENLKNEGHDISDDIELGIMVEIPATAALADVFAKEVD 449 (572)
T ss_dssp HHHHHHHHHHHHHTTTSCEEEEESCCCSHHHHHHHHHHHHHHHHHHHHHTCCCCSCCEEEEEECCHHHHHTHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEEccHHHHHHHHHHHHhCC
Confidence 33344557778888899999999999999999888877632 1346899999999999999999999999
Q ss_pred EEEEcCCCccc-CCCC---------------CCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHH
Q 008319 333 GAMVARGDLGA-ELPI---------------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAV 396 (570)
Q Consensus 333 gImIgrGDLg~-eig~---------------~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav 396 (570)
+++||+.||+. .++. +.|..+.++++.+|+++|||++++.+ |. ..|.. +..++
T Consensus 450 f~siGtNDLtQ~~lg~dR~~~~v~~~~dp~~paVl~li~~vv~aa~~~g~~vgiCGe----~a--gdp~~-----~~~l~ 518 (572)
T 2wqd_A 450 FFSIGTNDLIQYTLAADRMSERVSYLYQPYNPSILRLVKQVIEASHKEGKWTGMCGE----MA--GDETA-----IPLLL 518 (572)
T ss_dssp EEEECHHHHHHHHHTCCSSSGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSG----GG--GCTTT-----HHHHH
T ss_pred EEEECHHHHHHHHhccCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEEeCC----cc--CCHHH-----HHHHH
Confidence 99999999983 2221 35788889999999999999998765 22 24443 44678
Q ss_pred HhCccEEEec
Q 008319 397 REGADAVMLS 406 (570)
Q Consensus 397 ~~G~D~vmLs 406 (570)
..|+|.+.++
T Consensus 519 ~lG~~~~S~~ 528 (572)
T 2wqd_A 519 GLGLDEFSMS 528 (572)
T ss_dssp HHTCCEEEEC
T ss_pred HCCCCEEEec
Confidence 9999998876
No 25
>3oyz_A Malate synthase; TIM barrel, transferase; HET: ACO; 1.95A {Haloferax volcanii} PDB: 3oyx_A* 3pug_A
Probab=98.82 E-value=8.1e-09 Score=110.35 Aligned_cols=138 Identities=10% Similarity=0.062 Sum_probs=107.9
Q ss_pred Chh-hHHHhhhhhh------cCCcEEEecCCCChhHHHHHHHHHHhc----C---CCceEEEeecCcch---hhhHHHHH
Q 008319 266 TDK-DWEDIKFGVD------NQVDFYAVSFVKDAKVVHELKDYLKSC----N---ADIHVIVKIESADS---IPNLHSII 328 (570)
Q Consensus 266 t~k-D~~dI~~~~~------~gvd~I~~SfV~sa~dv~~vr~~l~~~----~---~~i~IiaKIEt~~g---v~NldeIl 328 (570)
|++ ..+||...+. .++|+|.+|+|++++++..+.+++... | ..+.++++|||++| +.|+++|+
T Consensus 94 T~~~~~~DL~al~~~~~~a~~~~dgIvLPKvesa~dV~~l~~~L~~~E~~~Gl~~G~i~lialIETa~g~~~L~na~eIA 173 (433)
T 3oyz_A 94 TRYQGFQHMLDITDPERGAVEHIHGFVIPEVGGIDDWKKADEFFTIVEHEHGLDEGSLAMSVIIESGEAELAMGDLRDEM 173 (433)
T ss_dssp HHHHHHHHHHHHTCGGGSCGGGCCEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCSEEEEEECSHHHHHHGGGHHHHH
T ss_pred ChhccHHHHHHHhccccccccCCCEEEeCCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEEEeChhHHHHHHHHHHHH
Confidence 455 6788887766 789999999999999999988877542 2 25889999999999 99999999
Q ss_pred Hh-------CCEEEEcCCCcccCCCCC-------CHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHH-HhHHH
Q 008319 329 SA-------SDGAMVARGDLGAELPIE-------DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIA 393 (570)
Q Consensus 329 ~~-------sDgImIgrGDLg~eig~~-------~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAE-v~Dv~ 393 (570)
.+ ++++++|+.||+.++|.. .+..+..+++.+|+++|+++|-. .....-..+- ..+..
T Consensus 174 aasr~~~pRV~gL~~G~~DLsasLG~~~~~~~~~el~~ARs~IVlAARAaGi~aIDg-------V~~di~D~egL~~ea~ 246 (433)
T 3oyz_A 174 GKPTNNLERLFLLVDGEVDYTKDMRAMTPTGELPAWPELRHNTSRGASAAGCVAVDG-------PYDDIRDVEGYRERMT 246 (433)
T ss_dssp HCTTCCGGGEEEEEECHHHHHHHHTCCCTTCCCCCCHHHHHHHHHHHHHHTCEEEEC-------CCCCTTCHHHHHHHHH
T ss_pred hhhccCCCCeEEEEECHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcccc-------cccCCCCHHHHHHHHH
Confidence 76 469999999999999873 47788889999999999987642 1111111111 44677
Q ss_pred HHHHhCccEEEecccccCCCCHHH
Q 008319 394 IAVREGADAVMLSGETAHGKFPLK 417 (570)
Q Consensus 394 nav~~G~D~vmLs~ETA~G~yP~e 417 (570)
.+...|+++-+. -||-+
T Consensus 247 ~ar~lGF~GK~~-------IHPsQ 263 (433)
T 3oyz_A 247 DNQAKGMLGIWS-------LTPGQ 263 (433)
T ss_dssp HHHTTTCCEEEE-------CSHHH
T ss_pred HHHhCCCCceEe-------cCHHH
Confidence 888999998776 47854
No 26
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=98.37 E-value=4.8e-07 Score=104.89 Aligned_cols=134 Identities=17% Similarity=0.112 Sum_probs=101.8
Q ss_pred CCCChhhHHHhhhhhh----cCCc---EEEecCCCChhHHHHHHHHHHh--------cC--CCceEEEeecCcchhhhHH
Q 008319 263 PSITDKDWEDIKFGVD----NQVD---FYAVSFVKDAKVVHELKDYLKS--------CN--ADIHVIVKIESADSIPNLH 325 (570)
Q Consensus 263 p~lt~kD~~dI~~~~~----~gvd---~I~~SfV~sa~dv~~vr~~l~~--------~~--~~i~IiaKIEt~~gv~Nld 325 (570)
|.+.+-..+.|..|.. .|.+ .|++|||+++++++.+++++.. .| .++.++++||++.|+.+++
T Consensus 680 peif~~QlrAi~~Aa~~~~~~G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~~~~~~~~G~~~~~~vg~MIEtP~a~l~ad 759 (876)
T 1vbg_A 680 PELTEMQARAIFEAAIAMTNQGVQVFPEIMVPLVGTPQELGHQVTLIRQVAEKVFANVGKTIGYKVGTMIEIPRAALVAD 759 (876)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCCEEEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTHH
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHHHH
Confidence 4444444455544333 3765 6899999999999998877642 13 3588999999999999999
Q ss_pred HHHHhCCEEEEcCCCcc-cCCCC----------------------------CCHHHHHHHHHHHHHHc--CCCEEEEccc
Q 008319 326 SIISASDGAMVARGDLG-AELPI----------------------------EDVPLLQEDIIRRCRSM--QKPVIVATNM 374 (570)
Q Consensus 326 eIl~~sDgImIgrGDLg-~eig~----------------------------~~v~~~qk~Ii~~c~~~--gKPvivaTqm 374 (570)
+|++.+|++.||..||+ ..+++ +.|..+.+.++++|+++ ||||+++.|+
T Consensus 760 eIA~~vDf~siGtNDLtQ~~lg~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCGe~ 839 (876)
T 1vbg_A 760 EIAEQAEFFSFGTNDLTQMTFGYSRDDVGKFIPVYLAQGILQHDPFEVLDQRGVGELVKFATERGRKARPNLKVGICGEH 839 (876)
T ss_dssp HHTTTCSEEEECHHHHHHHHHTCCTTTGGGTHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEEESGG
T ss_pred HHHHhCCEEEECHHHHHHHHhCCCCCchhhhHHHHhhcccccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEcCCc
Confidence 99999999999999998 43443 35777888999999998 9999998762
Q ss_pred hhhhhcCCCcChHHHhHHHHHHHhCccEEEecc
Q 008319 375 LESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (570)
Q Consensus 375 LeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (570)
...|.- +.-++..|.|.+-+|.
T Consensus 840 ------~gdP~~-----~~~l~~~Gl~~vS~sp 861 (876)
T 1vbg_A 840 ------GGEPSS-----VAFFAKAGLDYVSCSP 861 (876)
T ss_dssp ------GGSHHH-----HHHHHHTTCSEEEECG
T ss_pred ------CCCHHH-----HHHHHHcCCCEEEECc
Confidence 123443 4467899999998874
No 27
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=98.24 E-value=1.1e-06 Score=101.84 Aligned_cols=134 Identities=16% Similarity=0.158 Sum_probs=102.0
Q ss_pred CCCChhhHHHhhhhhhc-----CCc---EEEecCCCChhHHHHHHHHHHhc--------C--CCceEEEeecCcchhhhH
Q 008319 263 PSITDKDWEDIKFGVDN-----QVD---FYAVSFVKDAKVVHELKDYLKSC--------N--ADIHVIVKIESADSIPNL 324 (570)
Q Consensus 263 p~lt~kD~~dI~~~~~~-----gvd---~I~~SfV~sa~dv~~vr~~l~~~--------~--~~i~IiaKIEt~~gv~Nl 324 (570)
|.+.+-..+.|..|... |.+ .|++|||+++++++.+++++... | .++.+.++||++.|+.++
T Consensus 673 peif~~QlrAi~~Aa~~~~~~~G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~~~~~~~~g~~~~~~vg~MIEtP~a~l~a 752 (873)
T 1kbl_A 673 PEIAKMQTRAVMEAAIEVKEETGIDIVPEIMIPLVGEKKELKFVKDVVVEVAEQVKKEKGSDMQYHIGTMIEIPRAALTA 752 (873)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTH
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHHH
Confidence 44444445555544333 765 68999999999999998776422 3 358899999999999999
Q ss_pred HHHHHhCCEEEEcCCCcc-cCCCC----------------------------CCHHHHHHHHHHHHHHc--CCCEEEEcc
Q 008319 325 HSIISASDGAMVARGDLG-AELPI----------------------------EDVPLLQEDIIRRCRSM--QKPVIVATN 373 (570)
Q Consensus 325 deIl~~sDgImIgrGDLg-~eig~----------------------------~~v~~~qk~Ii~~c~~~--gKPvivaTq 373 (570)
++|++.+|++.||..||. ..++. +.|..+.+.++++|+++ |+||+++.|
T Consensus 753 d~iA~~vdf~siGtNDLtQ~~lg~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCGe 832 (873)
T 1kbl_A 753 DAIAEEAEFFSFGTNDLTQMTFGFSRDDAGKFLDSYYKAKIYESDPFARLDQTGVGQLVEMAVKKGRQTRPGLKCGICGE 832 (873)
T ss_dssp HHHTTTCSEEEECHHHHHHHHHTCCHHHHHHHHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHCTTCEEEECSG
T ss_pred HHHHHhCCEEEECHHHHHHHHhCCCCCchhhhHHHHHhccccccCchhhhchHHHHHHHHHHHHHHHHhCCCCeEEECCC
Confidence 999999999999999998 44443 35777888999999997 899999866
Q ss_pred chhhhhcCCCcChHHHhHHHHHHHhCccEEEecc
Q 008319 374 MLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (570)
Q Consensus 374 mLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (570)
+ ...|.- +.-++..|.|.+-+|.
T Consensus 833 ~------~gdP~~-----~~~l~~~Gl~~vS~sp 855 (873)
T 1kbl_A 833 H------GGDPSS-----VEFCHKVGLNYVSCSP 855 (873)
T ss_dssp G------GGSHHH-----HHHHHHTTCSEEEECG
T ss_pred C------CCCHHH-----HHHHHHcCCCEEEECh
Confidence 2 123443 4457899999998773
No 28
>3cux_A Malate synthase; TIM barrel, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.70A {Bacillus anthracis}
Probab=97.68 E-value=5.6e-05 Score=82.94 Aligned_cols=121 Identities=15% Similarity=0.181 Sum_probs=88.4
Q ss_pred hcCCcEEEecCCCChhHHHHHHHHHHhc----C---CCceEEEeecCcchhhhHHHHHHh----CCEEEEcCCCcccCCC
Q 008319 278 DNQVDFYAVSFVKDAKVVHELKDYLKSC----N---ADIHVIVKIESADSIPNLHSIISA----SDGAMVARGDLGAELP 346 (570)
Q Consensus 278 ~~gvd~I~~SfV~sa~dv~~vr~~l~~~----~---~~i~IiaKIEt~~gv~NldeIl~~----sDgImIgrGDLg~eig 346 (570)
..|+ +|.+|++++++++..+.+.+... | ..+++.++|||..|+-|++||+.. +.|+..|+.|+..+++
T Consensus 202 ~~gp-yi~LPK~es~~Ev~~~~~lf~~~E~~lGlp~gtIki~vlIET~~a~~n~~eI~~a~~~rv~gLn~G~~Dy~~s~i 280 (528)
T 3cux_A 202 GSGP-YFYLPKMESYLEARLWNDVFVFAQKYIGIPNGTIKATVLLETIHASFEMDEILYELKDHSAGLNCGRWDYIFSFL 280 (528)
T ss_dssp TCCC-EEEECCCCSHHHHHHHHHHHHHHHHHHTCCTTCCEEEEEECSHHHHTSHHHHHHHTGGGEEEEEECSHHHHHHHH
T ss_pred CCCC-EEEccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEEeCCHHHHHhHHHHHHhccCceeEEecCHHHHHHHhh
Confidence 4576 99999999999999888776432 2 258999999999999999999966 4499999999877663
Q ss_pred C----------C----------CHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcCh-----------HHHhHHHHH
Q 008319 347 I----------E----------DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTR-----------AEVSDIAIA 395 (570)
Q Consensus 347 ~----------~----------~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~Ptr-----------AEv~Dv~na 395 (570)
. + -+....+.++..|+++|++.|-. |.. -.|.+ .=..|-...
T Consensus 281 ~t~~~~~~~vlpdR~~v~~~~p~~~ay~~~lV~ac~a~G~~aIgG------m~a-~ip~~~D~~~n~~~~~~~~~dk~~~ 353 (528)
T 3cux_A 281 KAFRNHNEFLLPDRAQVTMTAPFMRAYSLKVIQTCHRRNAPAIGG------MAA-QIPIKNNPEANEAAFEKVRADKERE 353 (528)
T ss_dssp HHTTTCTTCCCCCGGGCCTTSHHHHHHHHHHHHHHHHTTCCEEC--------------------------CHHHHHHHHH
T ss_pred hhccCCccccchhhhhcccccHHHHHHHHHHHHHHHHcCCCCccc------ccc-cCcCcCChHHHHHHHHHHHHHHHHH
Confidence 1 1 14455667889999999987742 211 12222 114556788
Q ss_pred HHhCccEEEec
Q 008319 396 VREGADAVMLS 406 (570)
Q Consensus 396 v~~G~D~vmLs 406 (570)
..+|+|+-++-
T Consensus 354 ~~~GfdGkwvi 364 (528)
T 3cux_A 354 ALDGHDGTWVA 364 (528)
T ss_dssp HHHTCSBEEES
T ss_pred HhCCCCccccc
Confidence 99999998883
No 29
>3cuz_A MSA, malate synthase A; TIM barrel, cytoplasm, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.04A {Escherichia coli} PDB: 3cv1_A 3cv2_A*
Probab=97.66 E-value=0.00011 Score=80.59 Aligned_cols=132 Identities=10% Similarity=0.119 Sum_probs=91.0
Q ss_pred HHHhhhhhhcC-CcEEEecCCCChhHHHHHHHHHHhc----C---CCceEEEeecCcchhhhHHHHHHh----CCEEEEc
Q 008319 270 WEDIKFGVDNQ-VDFYAVSFVKDAKVVHELKDYLKSC----N---ADIHVIVKIESADSIPNLHSIISA----SDGAMVA 337 (570)
Q Consensus 270 ~~dI~~~~~~g-vd~I~~SfV~sa~dv~~vr~~l~~~----~---~~i~IiaKIEt~~gv~NldeIl~~----sDgImIg 337 (570)
..|++..+..| .++|.+|++++++++..+.+.+... | ..+++++.|||+.|+.|++||+.. +-|+..|
T Consensus 195 ~~Dl~~l~~~g~g~~i~LPK~es~~Ev~~~~~~f~~~E~~lGlp~gtiki~vlIET~~a~~n~~eIa~al~~rv~gLn~G 274 (532)
T 3cuz_A 195 FHNYQALLAKGSGPYFYLPKTQSWQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMDEILHALRDHIVGLNCG 274 (532)
T ss_dssp HHHHHHHHHTTCCCEEEECCCCCHHHHHHHHHHHHHHHHHTTCCTTCSEEEEECCSHHHHTSHHHHHHHTTTTEEEEECC
T ss_pred HHHHHHHHcCCCCCeEEccCCCCHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeccHHHHHhHHHHHHhccCCceEEEcC
Confidence 34444444432 4999999999999999888777422 2 247899999999999999999975 4499999
Q ss_pred CCCcccCCCC----------C---------CHHHHHHHHH-HHHHHcCCCEEEE-ccchhhhhcCCCcCh--H----HHh
Q 008319 338 RGDLGAELPI----------E---------DVPLLQEDII-RRCRSMQKPVIVA-TNMLESMIDHPTPTR--A----EVS 390 (570)
Q Consensus 338 rGDLg~eig~----------~---------~v~~~qk~Ii-~~c~~~gKPviva-TqmLeSM~~~~~Ptr--A----Ev~ 390 (570)
+.|+..++.- + .+..+..+++ ..|+++|++.|-- +.++. ...|.. + =..
T Consensus 275 ~~Dy~~s~i~~~~~~~~~~lpdr~~~~~~~~~l~Ay~~llv~ac~a~G~~aIdGm~a~~p----~kD~e~~~~~~~~l~~ 350 (532)
T 3cuz_A 275 RWDYIFSYIKTLKNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCHKRGAFAMGGMAAFIP----SKDEEHNNQVLNKVKA 350 (532)
T ss_dssp SHHHHHHHHHHTTTCGGGCCCCGGGCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEECBCC----CSSGGGCHHHHHHHHH
T ss_pred HHHHHHHHHhhcccCCCccCccccccccchHHHHHHHHHHHHHHHHcCCCCccCccccCC----CCChhHHHHHHHHHHH
Confidence 9998876610 1 1344445554 9999999987751 11111 011211 0 134
Q ss_pred HHHHHHHhCccEEEe
Q 008319 391 DIAIAVREGADAVML 405 (570)
Q Consensus 391 Dv~nav~~G~D~vmL 405 (570)
|-......|+|+-+.
T Consensus 351 dk~~~~~~GfdGkwv 365 (532)
T 3cuz_A 351 DKSLEANNGHDGTWI 365 (532)
T ss_dssp HHHHHHHHTCSEEEE
T ss_pred HHHHHHHCCCCcccc
Confidence 567888999999887
No 30
>1p7t_A MSG, malate synthase G; TIM barrel, glyoxylate cycle, acetyl-COA, cysteine-sulfenic lyase; HET: ACO PG4; 1.95A {Escherichia coli str} SCOP: c.1.13.1 PDB: 1y8b_A 1d8c_A* 2jqx_A
Probab=97.49 E-value=0.0001 Score=82.65 Aligned_cols=130 Identities=14% Similarity=0.078 Sum_probs=93.0
Q ss_pred HHHhhhhhh--cCCcEEEecCCCChhHHHHHHHHHHhc----C---CCceEEEeecCcchhhhHHHHHHh----CCEEEE
Q 008319 270 WEDIKFGVD--NQVDFYAVSFVKDAKVVHELKDYLKSC----N---ADIHVIVKIESADSIPNLHSIISA----SDGAMV 336 (570)
Q Consensus 270 ~~dI~~~~~--~gvd~I~~SfV~sa~dv~~vr~~l~~~----~---~~i~IiaKIEt~~gv~NldeIl~~----sDgImI 336 (570)
..|++..+. .|.++|.+|++++++++..+.+.+... | ..+++.++|||+.|+-|++||+.. +-|+..
T Consensus 372 ~hDl~al~~sg~G~~yIvLPKmespeEV~~~~~lf~~~E~~lGlp~gTIKi~vLIET~ra~~nl~EI~~aa~~Rv~gLn~ 451 (731)
T 1p7t_A 372 LYDLKVQKNSRTGSVYIVKPKMHGPQEVAFANKLFTRIETMLGMAPNTLKMGIMDEERRTSLNLRSCIAQARNRVAFINT 451 (731)
T ss_dssp HHHHHHCSSCSSSCEEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEEECSHHHHTTHHHHHHTTTTTEEEEEE
T ss_pred HhhHHHHhhCCCCCcEEEeCCCCCHHHHHHHHHHHHHHHHhhCCCCCceEEEEEECCHHHHHhHHHHHHhhccceEEEEc
Confidence 455655443 358999999999999999888776432 2 258899999999999999999853 459999
Q ss_pred cCCCcccCC-CC---------------CC-HHHHHHHHHH---HHHHcCCCEEEEccchhhhhcCCCcChHH--HhHHHH
Q 008319 337 ARGDLGAEL-PI---------------ED-VPLLQEDIIR---RCRSMQKPVIVATNMLESMIDHPTPTRAE--VSDIAI 394 (570)
Q Consensus 337 grGDLg~ei-g~---------------~~-v~~~qk~Ii~---~c~~~gKPvivaTqmLeSM~~~~~PtrAE--v~Dv~n 394 (570)
|+.|+..++ +. .. +...++..+. +|+++|++.|-- .|-.. |..-+ ..+-..
T Consensus 452 G~~Dyt~d~I~t~~~~~~~vR~~~t~~~~~~~AY~r~~V~~gLAcraaG~~aIgk-----Gm~a~--p~dmeg~~~dk~~ 524 (731)
T 1p7t_A 452 GFLDRTGDEMHSVMEAGPMLRKNQMKSTPWIKAYERNNVLSGLFCGLRGKAQIGK-----GMWAM--PDLMADMYSQKGD 524 (731)
T ss_dssp CHHHHHHHHHHHTGGGSCBCCGGGSTTCHHHHHHHHHHHHHHHHTTCTTTSEEEE-----CCCCC--TTCHHHHHHHTHH
T ss_pred CHHHHhhhhhcccccCCcccccccccchHHHHHHHHHhhhhHHHHHHcCCCCccc-----ccccC--hhhHHHHHHHHHH
Confidence 999988774 21 01 2234455554 899999998751 12222 33333 556678
Q ss_pred HHHhCccEEEec
Q 008319 395 AVREGADAVMLS 406 (570)
Q Consensus 395 av~~G~D~vmLs 406 (570)
....|+|+-++-
T Consensus 525 ~~~~GfdGkwVi 536 (731)
T 1p7t_A 525 QLRAGANTAWVP 536 (731)
T ss_dssp HHHTTCSEEEES
T ss_pred HHhCCCCCcccC
Confidence 889999998884
No 31
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=97.32 E-value=0.00076 Score=78.40 Aligned_cols=137 Identities=16% Similarity=0.104 Sum_probs=103.9
Q ss_pred cCCCCCChhhHHHhhhhh----hcCCc---EEEecCCCChhHHHHHHHHHH--------hcCC--CceEEEeecCcchhh
Q 008319 260 ANLPSITDKDWEDIKFGV----DNQVD---FYAVSFVKDAKVVHELKDYLK--------SCNA--DIHVIVKIESADSIP 322 (570)
Q Consensus 260 ~~lp~lt~kD~~dI~~~~----~~gvd---~I~~SfV~sa~dv~~vr~~l~--------~~~~--~i~IiaKIEt~~gv~ 322 (570)
+..|.+.+-..+.|..|. +.|.+ .|++|||++.++++.+++.+. +.|. ++++..|||+|.+.-
T Consensus 697 l~~peif~~QlrAi~rAa~~~~~~G~~~~~~IMiPmV~t~~E~~~~~~~i~~~~~el~~e~g~~~~~~vG~MiEvPsaal 776 (913)
T 1h6z_A 697 ITYPEIYNMQVRAIIEAAIAVSEEGSSVIPEIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAV 776 (913)
T ss_dssp HHSTTHHHHHHHHHHHHHHHHHTTTCCCCEEEEECCCCSHHHHHHHHHHHHHHHHHHHHHSCSCCCCEEEEEECSHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecchHHHH
Confidence 345666666777776653 23754 789999999999999888753 2232 588999999999999
Q ss_pred hHHHHHHhCCEEEEcCCCcccC-CCC----------------------------CCHHHHHHHHHHHHHH--cCCCEEEE
Q 008319 323 NLHSIISASDGAMVARGDLGAE-LPI----------------------------EDVPLLQEDIIRRCRS--MQKPVIVA 371 (570)
Q Consensus 323 NldeIl~~sDgImIgrGDLg~e-ig~----------------------------~~v~~~qk~Ii~~c~~--~gKPviva 371 (570)
.+|+|++.+|++-||-.||.-- +++ +.|..+.+.++++|++ .|+||+++
T Consensus 777 ~ad~ia~~~DFfSiGTNDLTQ~tlg~dRd~~~~~l~~y~~~~i~~~dPf~~ld~paV~~lI~~ai~~a~~~~~g~~vgIC 856 (913)
T 1h6z_A 777 TADSIAQKADFFSFGTNDLTQMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGIC 856 (913)
T ss_dssp THHHHTTTCSEEEECTTHHHHHHHTCCGGGCHHHHTTTTTTCSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEEC
T ss_pred HHHHHHHhCCEEEEChHHHHHHHhccCCCchHHHHHHHHhccccccCcccccChHHHHHHHHHHHHHHHhcCCCCEEEEc
Confidence 9999999999999999997521 111 4567788899999997 69999998
Q ss_pred ccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecc
Q 008319 372 TNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (570)
Q Consensus 372 TqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (570)
.|+= ..|.- +.-++..|.|.+-+|.
T Consensus 857 GE~~------gdP~~-----~~~l~~~Gid~vS~sp 881 (913)
T 1h6z_A 857 GEHG------GDPAT-----IGFCHKVGLDYVSCSP 881 (913)
T ss_dssp SGGG------GCHHH-----HHHHHHHTCSEEEECG
T ss_pred CCCC------CCHHH-----HHHHHHcCCCEEEECc
Confidence 7631 23444 4467889999998873
No 32
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=95.84 E-value=0.044 Score=64.08 Aligned_cols=114 Identities=18% Similarity=0.150 Sum_probs=84.2
Q ss_pred EEEecCCCChhHHHHHHHHHH--------hcCC--CceEEEeecCcchhhhHHHHHHhCCEEEEcCCCcc-----cCC--
Q 008319 283 FYAVSFVKDAKVVHELKDYLK--------SCNA--DIHVIVKIESADSIPNLHSIISASDGAMVARGDLG-----AEL-- 345 (570)
Q Consensus 283 ~I~~SfV~sa~dv~~vr~~l~--------~~~~--~i~IiaKIEt~~gv~NldeIl~~sDgImIgrGDLg-----~ei-- 345 (570)
.|++|||++.++++.+++.+. +.+. +++|-.|||+|.++-.+|+|++.+|++=||-.||. ++=
T Consensus 727 ~IMiPmV~~~~E~~~~~~~v~~~~~~~~~~~g~~~~~~vG~MiEvPsaal~ad~~a~~~DFfSiGTNDLTQ~tlg~DRd~ 806 (913)
T 2x0s_A 727 EIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAVTADSIAQKADFFSFGTNDLTQMGCGFSRDD 806 (913)
T ss_dssp EEEETTCCSHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECSHHHHHTHHHHGGGCSEEEECTTHHHHHHHTCCGGG
T ss_pred EEEeeecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeHHHHHHHHHHHHHHCCEEEECHhHHHHHHHHHhcCC
Confidence 589999999999988776542 2233 57899999999999999999999999999999973 221
Q ss_pred -----------------CC-----CCHHHHHHHHHHHHHHcC--CCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCcc
Q 008319 346 -----------------PI-----EDVPLLQEDIIRRCRSMQ--KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGAD 401 (570)
Q Consensus 346 -----------------g~-----~~v~~~qk~Ii~~c~~~g--KPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D 401 (570)
|+ +-|..+.+..++.+++++ .||.++.|| ...|.- +.-++..|.|
T Consensus 807 ~~~~~~~y~~~~~~~~dp~~~~~~~~v~~li~~a~~~gr~~~~~i~vgICGE~------~gdP~~-----~~~L~~~Gid 875 (913)
T 2x0s_A 807 AGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICGEH------GGDPAT-----IGFCHKVGLD 875 (913)
T ss_dssp CHHHHHHHHHHTSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEECSGG------GGCHHH-----HHHHHHHTCS
T ss_pred chhhhhhhhhccccccCCCchhHHHHHHHHHHHHHHHhhhcCCCCeEEEeCCc------ccCHHH-----HHHHHHcCCC
Confidence 01 135555566666676665 588988773 123443 4467899999
Q ss_pred EEEecc
Q 008319 402 AVMLSG 407 (570)
Q Consensus 402 ~vmLs~ 407 (570)
.+-+|.
T Consensus 876 ~~S~sP 881 (913)
T 2x0s_A 876 YVSCSP 881 (913)
T ss_dssp EEEECG
T ss_pred EEEECh
Confidence 998883
No 33
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=95.43 E-value=0.21 Score=54.92 Aligned_cols=125 Identities=18% Similarity=0.213 Sum_probs=86.8
Q ss_pred ChhhHHHhhhhhhcCCcEEEec--CCCChhHHHHHHHHHHhcCCCceEEE-eecCcchhhhHHHHHHhCCEEEEcCCCcc
Q 008319 266 TDKDWEDIKFGVDNQVDFYAVS--FVKDAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISASDGAMVARGDLG 342 (570)
Q Consensus 266 t~kD~~dI~~~~~~gvd~I~~S--fV~sa~dv~~vr~~l~~~~~~i~Iia-KIEt~~gv~NldeIl~~sDgImIgrGDLg 342 (570)
++.+++.+...++.|+|+|++- .-.+ +.+.+.-+++++...++.||| .+-|.++.++|-+ .-+|++-||-|-=+
T Consensus 279 ~~d~~eR~~aLv~AGvD~iviD~ahGhs-~~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~--aGAD~vkVGiGpGS 355 (556)
T 4af0_A 279 RPGDKDRLKLLAEAGLDVVVLDSSQGNS-VYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIA--AGADGLRIGMGSGS 355 (556)
T ss_dssp SHHHHHHHHHHHHTTCCEEEECCSCCCS-HHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHH--HTCSEEEECSSCST
T ss_pred CccHHHHHHHHHhcCCcEEEEecccccc-HHHHHHHHHHHhhCCcceEEeccccCHHHHHHHHH--cCCCEEeecCCCCc
Confidence 4566777777789999998764 2233 334445556666667888887 9999999877643 33999999866533
Q ss_pred cC-------CCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 343 AE-------LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 343 ~e-------ig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
+- +|.+.+ .+...+.+.|++.|+|+|- ....-+ --|++-|+..|+|+|||.
T Consensus 356 iCtTr~v~GvG~PQ~-tAi~~~a~~a~~~~vpvIA---------DGGI~~---sGDi~KAlaaGAd~VMlG 413 (556)
T 4af0_A 356 ICITQEVMAVGRPQG-TAVYAVAEFASRFGIPCIA---------DGGIGN---IGHIAKALALGASAVMMG 413 (556)
T ss_dssp TBCCTTTCCSCCCHH-HHHHHHHHHHGGGTCCEEE---------ESCCCS---HHHHHHHHHTTCSEEEES
T ss_pred ccccccccCCCCcHH-HHHHHHHHHHHHcCCCEEe---------cCCcCc---chHHHHHhhcCCCEEEEc
Confidence 22 233333 3445677888999999883 333322 468999999999999985
No 34
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=93.83 E-value=0.59 Score=44.16 Aligned_cols=137 Identities=16% Similarity=0.139 Sum_probs=85.3
Q ss_pred hhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCc-chhhhHHHHHHh-CCEEEEcCCCcccCCCCCCH
Q 008319 273 IKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESA-DSIPNLHSIISA-SDGAMVARGDLGAELPIEDV 350 (570)
Q Consensus 273 I~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~-~gv~NldeIl~~-sDgImIgrGDLg~eig~~~v 350 (570)
++.+.+.|+|+|.++-....+++.++.+++++.|.. ++.-+-++ +..+.+..+.+. +|.|.+.+|-=+...+...+
T Consensus 70 ~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~--~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~g~~g~~~~~~~~ 147 (211)
T 3f4w_A 70 SQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQ--VVVDMICVDDLPARVRLLEEAGADMLAVHTGTDQQAAGRKPI 147 (211)
T ss_dssp HHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCE--EEEECTTCSSHHHHHHHHHHHTCCEEEEECCHHHHHTTCCSH
T ss_pred HHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCe--EEEEecCCCCHHHHHHHHHHcCCCEEEEcCCCcccccCCCCH
Confidence 677788999999987655446677777778776643 33322122 234567777777 99998876632222222221
Q ss_pred HHHHHHHHHHHHHc-CCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHH
Q 008319 351 PLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALR 428 (570)
Q Consensus 351 ~~~qk~Ii~~c~~~-gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~ 428 (570)
...+++ .... +.|+++. ....| .++..+...|+|++....--..+..|.++++.+.+.+++
T Consensus 148 -~~i~~l---~~~~~~~~i~~~--------gGI~~-----~~~~~~~~~Gad~vvvGsai~~~~d~~~~~~~l~~~~~~ 209 (211)
T 3f4w_A 148 -DDLITM---LKVRRKARIAVA--------GGISS-----QTVKDYALLGPDVVIVGSAITHAADPAGEARKISQVLLQ 209 (211)
T ss_dssp -HHHHHH---HHHCSSCEEEEE--------SSCCT-----TTHHHHHTTCCSEEEECHHHHTCSSHHHHHHHHHHHHHH
T ss_pred -HHHHHH---HHHcCCCcEEEE--------CCCCH-----HHHHHHHHcCCCEEEECHHHcCCCCHHHHHHHHHHHHhh
Confidence 222222 2222 6777653 22222 356777888999999876555677899999988876653
No 35
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=93.49 E-value=1.1 Score=47.07 Aligned_cols=122 Identities=20% Similarity=0.278 Sum_probs=75.1
Q ss_pred hhHHHhhhhhhcCCcEEEe--cCCCChhHHHHHHHHHHhcCCCceEEE-eecCcchhhhHHHHHHh-CCEEEEc--CCCc
Q 008319 268 KDWEDIKFGVDNQVDFYAV--SFVKDAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISA-SDGAMVA--RGDL 341 (570)
Q Consensus 268 kD~~dI~~~~~~gvd~I~~--SfV~sa~dv~~vr~~l~~~~~~i~Iia-KIEt~~gv~NldeIl~~-sDgImIg--rGDL 341 (570)
.+.+.++.+++.|+|+|.+ ++..+...+..++. +.+...++.+++ .+-|.+..+.+ .+. +|+|.+| +|--
T Consensus 108 ~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~-ik~~~p~v~Vi~G~v~t~e~A~~a---~~aGAD~I~vG~gpGs~ 183 (366)
T 4fo4_A 108 GNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRE-TRAAYPHLEIIGGNVATAEGARAL---IEAGVSAVKVGIGPGSI 183 (366)
T ss_dssp TCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHH-HHHHCTTCEEEEEEECSHHHHHHH---HHHTCSEEEECSSCSTT
T ss_pred hHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHH-HHHhcCCCceEeeeeCCHHHHHHH---HHcCCCEEEEecCCCCC
Confidence 4566777888999999887 44444433333443 333334677766 57676654443 344 9999996 3321
Q ss_pred cc-----CCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 342 GA-----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 342 g~-----eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
.. ..+.+. .....++.+.|+..++|+|-+ ...-+ ..|++.++..|+|++|+.
T Consensus 184 ~~tr~~~g~g~p~-~~~l~~v~~~~~~~~iPVIA~---------GGI~~---~~di~kala~GAd~V~vG 240 (366)
T 4fo4_A 184 CTTRIVTGVGVPQ-ITAIADAAGVANEYGIPVIAD---------GGIRF---SGDISKAIAAGASCVMVG 240 (366)
T ss_dssp BCHHHHHCCCCCH-HHHHHHHHHHHGGGTCCEEEE---------SCCCS---HHHHHHHHHTTCSEEEES
T ss_pred CCcccccCcccch-HHHHHHHHHHHhhcCCeEEEe---------CCCCC---HHHHHHHHHcCCCEEEEC
Confidence 10 122332 233455666777789999853 23322 347889999999999985
No 36
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=93.25 E-value=0.38 Score=46.36 Aligned_cols=98 Identities=17% Similarity=0.178 Sum_probs=65.2
Q ss_pred hHHHHHHHHHHHhhcCC-cEEEEcCChHHHHHHHhcCCCCeEEEEeC------------CHHHHHHhccccCcEEEEecC
Q 008319 451 GDMFAFHSTTMANTLNT-PIIVFTRTGSMAVILSHYRPSSTIFAFTN------------QERIKQRLVLYQGVMPIYMQF 517 (570)
Q Consensus 451 ~~~ia~~av~~a~~~~a-~Iiv~T~sG~tA~~ls~~RP~~pIiavt~------------~~~taRrL~L~rGV~Pil~~~ 517 (570)
++.....|++-|.+++. .|||.|.+|.||+++...-.. -|++||+ ++.+.+.|. -.|+.-+....
T Consensus 36 T~~tl~la~era~e~~Ik~iVVASssG~TA~k~~e~~~~-~lVvVTh~~GF~~pg~~e~~~e~~~~L~-~~G~~V~t~tH 113 (206)
T 1t57_A 36 TERVLELVGERADQLGIRNFVVASVSGETALRLSEMVEG-NIVSVTHHAGFREKGQLELEDEARDALL-ERGVNVYAGSH 113 (206)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHTTCCS-EEEEECCCTTSSSTTCCSSCHHHHHHHH-HHTCEEECCSC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHccC-CEEEEeCcCCCCCCCCCcCCHHHHHHHH-hCCCEEEEeec
Confidence 45666778888999998 899999999999999986655 9999994 355555542 22332221110
Q ss_pred C--------------CCHHHHHHHHH--------------HHHHHcCCCCCCCEEEEEecC
Q 008319 518 S--------------DDVEETFSRAI--------------KLLMDKNLVTKGEFVTLVQSG 550 (570)
Q Consensus 518 ~--------------~d~d~~i~~al--------------~~lke~Gllk~GD~VVvv~G~ 550 (570)
. ....+.+..++ -.+.+.|++..|+.||-+.|.
T Consensus 114 ~lsG~eR~is~kfGG~~p~eiiA~tLR~fgqG~KV~vEi~lMAaDAGlIp~geeVIAiGGT 174 (206)
T 1t57_A 114 ALSGVGRGISNRFGGVTPVEIMAETLRMVSQGFKVCVEIAIMAADAGLIPVDEEVIAIGGT 174 (206)
T ss_dssp TTTTHHHHHHHHHCSCCHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTSSCSSSCEEEEECS
T ss_pred cccchhHHHHHhcCCCCHHHHHHHHHHHhCCCceEEEEEeeeeecCCCCCCCCeEEEEccc
Confidence 0 11222222211 135689999999999999884
No 37
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=93.15 E-value=0.8 Score=48.64 Aligned_cols=119 Identities=24% Similarity=0.321 Sum_probs=71.7
Q ss_pred HHHhhhhhhcCCcEEEe--cCCCChhHHHHHHHHHHhcCCCceEEE-eecCcchhhhHHHHHHh-CCEEEEcC--CCccc
Q 008319 270 WEDIKFGVDNQVDFYAV--SFVKDAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISA-SDGAMVAR--GDLGA 343 (570)
Q Consensus 270 ~~dI~~~~~~gvd~I~~--SfV~sa~dv~~vr~~l~~~~~~i~Iia-KIEt~~gv~NldeIl~~-sDgImIgr--GDLg~ 343 (570)
.+.++..++.|+|+|.+ ++-.+......++. +.+.- ++++++ .+-|.+. ...+.+. +|+|.+|. |....
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~-ik~~~-~i~Vi~g~V~t~e~---A~~a~~aGAD~I~vG~g~Gs~~~ 220 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKE-IKSKM-NIDVIVGNVVTEEA---TKELIENGADGIKVGIGPGSICT 220 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHH-HHTTC-CCEEEEEEECSHHH---HHHHHHTTCSEEEECC-------
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHH-HHhcC-CCeEEEeecCCHHH---HHHHHHcCCCEEEEeCCCCcCcc
Confidence 46677788999999986 55544332333433 33222 577886 5655444 4444555 99999963 32211
Q ss_pred -----CCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 344 -----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 344 -----eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
..+.+ -..+..++.+.+++.+.|||-+ ...-+ ..|++.++..|+|++|+.
T Consensus 221 tr~~~g~g~p-~~~al~~v~~~~~~~~IPVIA~---------GGI~~---~~di~kalalGAd~V~vG 275 (400)
T 3ffs_A 221 TRIVAGVGVP-QITAIEKCSSVASKFGIPIIAD---------GGIRY---SGDIGKALAVGASSVMIG 275 (400)
T ss_dssp --CCSCBCCC-HHHHHHHHHHHHTTTTCCEEEE---------SCCCS---HHHHHHHHTTTCSEEEEC
T ss_pred cccccccchh-HHHHHHHHHHHHHhcCCCEEec---------CCCCC---HHHHHHHHHcCCCEEEEC
Confidence 01222 2344566667777779999864 33322 457889999999999984
No 38
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=92.98 E-value=0.81 Score=44.73 Aligned_cols=138 Identities=12% Similarity=0.143 Sum_probs=84.8
Q ss_pred HhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHhCCEEEEcCCCcccCCCCC---
Q 008319 272 DIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIE--- 348 (570)
Q Consensus 272 dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDgImIgrGDLg~eig~~--- 348 (570)
.++.+.+.|+|+|.+.. +..+++.+.-+.+++.|..+.+. +-....++.+++++...|.|.+ ++++-|+.
T Consensus 79 ~i~~~~~aGad~itvH~-Ea~~~~~~~i~~i~~~G~k~gva--l~p~t~~e~l~~~l~~~D~Vl~----msv~pGf~Gq~ 151 (228)
T 3ovp_A 79 WVKPMAVAGANQYTFHL-EATENPGALIKDIRENGMKVGLA--IKPGTSVEYLAPWANQIDMALV----MTVEPGFGGQK 151 (228)
T ss_dssp GHHHHHHHTCSEEEEEG-GGCSCHHHHHHHHHHTTCEEEEE--ECTTSCGGGTGGGGGGCSEEEE----ESSCTTTCSCC
T ss_pred HHHHHHHcCCCEEEEcc-CCchhHHHHHHHHHHcCCCEEEE--EcCCCCHHHHHHHhccCCeEEE----eeecCCCCCcc
Confidence 34556688999998864 44456666666777776655554 4434457888999999998887 33333331
Q ss_pred CHHHHHHHHHHHHHHc--CCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHH
Q 008319 349 DVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVA 426 (570)
Q Consensus 349 ~v~~~qk~Ii~~c~~~--gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~ 426 (570)
-.+...++| +..++. +.|+.+. -.-.|. .+..++..|+|.+...+---...-|.++++.|++.+
T Consensus 152 f~~~~l~ki-~~lr~~~~~~~I~Vd--------GGI~~~-----t~~~~~~aGAd~~VvGsaIf~a~dp~~~~~~l~~~~ 217 (228)
T 3ovp_A 152 FMEDMMPKV-HWLRTQFPSLDIEVD--------GGVGPD-----TVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVC 217 (228)
T ss_dssp CCGGGHHHH-HHHHHHCTTCEEEEE--------SSCSTT-----THHHHHHHTCCEEEESHHHHTCSCHHHHHHHHHHHH
T ss_pred cCHHHHHHH-HHHHHhcCCCCEEEe--------CCcCHH-----HHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHH
Confidence 122222222 222333 3455443 233333 366789999999998643334567999999988876
Q ss_pred HHhh
Q 008319 427 LRTE 430 (570)
Q Consensus 427 ~~aE 430 (570)
.++-
T Consensus 218 ~~~~ 221 (228)
T 3ovp_A 218 SEAA 221 (228)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6554
No 39
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=92.77 E-value=1.1 Score=48.96 Aligned_cols=124 Identities=19% Similarity=0.203 Sum_probs=76.2
Q ss_pred hhhHHHhhhhhhcCCcEEEecCCC-ChhHHHHHHHHHHhcCCCceEEE-eecCcchhhhHHHHHHh-CCEEEEcCCCccc
Q 008319 267 DKDWEDIKFGVDNQVDFYAVSFVK-DAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISA-SDGAMVARGDLGA 343 (570)
Q Consensus 267 ~kD~~dI~~~~~~gvd~I~~SfV~-sa~dv~~vr~~l~~~~~~i~Iia-KIEt~~gv~NldeIl~~-sDgImIgrGDLg~ 343 (570)
+.+.+.+...++.|+|.|.+.... ..+.+.++-+.+.+.-.++.+++ .|-|.+..+ ...+. +|+|.+|-|-=+.
T Consensus 255 ~d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~---~~~~aGad~i~vg~g~gsi 331 (511)
T 3usb_A 255 ADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVATAEATK---ALIEAGANVVKVGIGPGSI 331 (511)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHH---HHHHHTCSEEEECSSCSTT
T ss_pred cchHHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeeeeccHHHHH---HHHHhCCCEEEECCCCccc
Confidence 345677777889999999885432 22333333333433334566665 666655543 33444 9999986443111
Q ss_pred -------CCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 344 -------ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 344 -------eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
.++.+. ..+...+.+.|++.++|+|.+ ...- ...|++.|+..|+|++|+.
T Consensus 332 ~~~~~~~g~g~p~-~~~l~~v~~~~~~~~iPVIa~---------GGI~---~~~di~kala~GA~~V~vG 388 (511)
T 3usb_A 332 CTTRVVAGVGVPQ-LTAVYDCATEARKHGIPVIAD---------GGIK---YSGDMVKALAAGAHVVMLG 388 (511)
T ss_dssp CCHHHHHCCCCCH-HHHHHHHHHHHHTTTCCEEEE---------SCCC---SHHHHHHHHHTTCSEEEES
T ss_pred cccccccCCCCCc-HHHHHHHHHHHHhCCCcEEEe---------CCCC---CHHHHHHHHHhCchhheec
Confidence 122222 344557777888889999964 2222 2467899999999999985
No 40
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=92.63 E-value=0.87 Score=45.23 Aligned_cols=139 Identities=13% Similarity=0.086 Sum_probs=86.7
Q ss_pred HhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHhCCEEEEc---CCCcccCCCCC
Q 008319 272 DIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVA---RGDLGAELPIE 348 (570)
Q Consensus 272 dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDgImIg---rGDLg~eig~~ 348 (570)
.++...+.|+|+|.+.. +..+++.+.-+.+++.|....+...=.| -++.+++++...|.|.+- || ++-.-=++
T Consensus 101 ~i~~~~~aGAd~itvH~-Ea~~~~~~~i~~ir~~G~k~Gvalnp~T--p~e~l~~~l~~vD~VlvMsV~PG-fgGQ~fi~ 176 (246)
T 3inp_A 101 LIESFAKAGATSIVFHP-EASEHIDRSLQLIKSFGIQAGLALNPAT--GIDCLKYVESNIDRVLIMSVNPG-FGGQKFIP 176 (246)
T ss_dssp HHHHHHHHTCSEEEECG-GGCSCHHHHHHHHHTTTSEEEEEECTTC--CSGGGTTTGGGCSEEEEECSCTT-C--CCCCT
T ss_pred HHHHHHHcCCCEEEEcc-ccchhHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHhcCCEEEEeeecCC-CCCcccch
Confidence 35556689999998874 3345666666777777766555444344 567889999999988873 22 22211124
Q ss_pred CHHHHHHHHHHHHHHcCC--CEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHH
Q 008319 349 DVPLLQEDIIRRCRSMQK--PVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVA 426 (570)
Q Consensus 349 ~v~~~qk~Ii~~c~~~gK--PvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~ 426 (570)
....-.+++-+.+.+.|. ++-+. -.-.|.. +..++..|+|.++.-+---...-|.++++.|++.+
T Consensus 177 ~~l~KI~~lr~~~~~~~~~~~I~VD--------GGI~~~t-----i~~~~~aGAD~~V~GSaIf~a~dp~~~i~~l~~~i 243 (246)
T 3inp_A 177 AMLDKAKEISKWISSTDRDILLEID--------GGVNPYN-----IAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMRDEL 243 (246)
T ss_dssp THHHHHHHHHHHHHHHTSCCEEEEE--------SSCCTTT-----HHHHHTTTCCEEEESHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCeeEEEE--------CCcCHHH-----HHHHHHcCCCEEEEehHHhCCCCHHHHHHHHHHHH
Confidence 444444555555555554 44332 2333433 56789999999998633223467999999988765
Q ss_pred H
Q 008319 427 L 427 (570)
Q Consensus 427 ~ 427 (570)
.
T Consensus 244 ~ 244 (246)
T 3inp_A 244 N 244 (246)
T ss_dssp H
T ss_pred h
Confidence 4
No 41
>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3
Probab=92.41 E-value=0.23 Score=58.16 Aligned_cols=113 Identities=13% Similarity=0.126 Sum_probs=88.9
Q ss_pred hhhhhcCC---cEEEecCCCChhHHHHHHHHHHhcCC--CceEEEeecCcchhhhHHHHHHh---CC----------EEE
Q 008319 274 KFGVDNQV---DFYAVSFVKDAKVVHELKDYLKSCNA--DIHVIVKIESADSIPNLHSIISA---SD----------GAM 335 (570)
Q Consensus 274 ~~~~~~gv---d~I~~SfV~sa~dv~~vr~~l~~~~~--~i~IiaKIEt~~gv~NldeIl~~---sD----------gIm 335 (570)
+.+.+.|. ..+.+|+.+++.|+.++--+.++.|- .+.|+.-.||.+.++|.++|++. .+ -||
T Consensus 519 ~~i~~~g~~a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VVPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~QeVM 598 (970)
T 1jqo_A 519 HVLAELPPDSFGPYIISMATAPSDVLAVELLQRECGVRQPLPVVPLFERLADLQSAPASVERLFSVDWYMDRIKGKQQVM 598 (970)
T ss_dssp HHHHHSCSTTEEEEEETTCCSTHHHHHHHHHHHHTCCSSCCCEEEEECSHHHHHTHHHHHHHHHTCHHHHHHHTSEEEEE
T ss_pred HHHHHhChhhhCeEEeCCCCCHHHHHHHHHHHHHcCCCCCCCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCeEEEE
Confidence 33444554 45789999999999999888888874 58899999999999999999987 21 699
Q ss_pred EcCCCcccCCCC----CCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcCh
Q 008319 336 VARGDLGAELPI----EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTR 386 (570)
Q Consensus 336 IgrGDLg~eig~----~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~Ptr 386 (570)
+|..|=+.+-|+ -.+..+|+++.+.|+++|.++.+.=-.=.|.-...-|+.
T Consensus 599 LGYSDS~KD~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lFHGRGGsvgRGGgp~~ 653 (970)
T 1jqo_A 599 VGYSDSGKDAGRLSAAWQLYRAQEEMAQVAKRYGVKLTLFHGRGGTVGRGGGPTH 653 (970)
T ss_dssp EESTTHHHHSCHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCSSGGGTCCCHH
T ss_pred EecccccccccHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCCCCCCCCChH
Confidence 999998888887 368899999999999999998764333333344444444
No 42
>3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens}
Probab=92.40 E-value=0.12 Score=56.60 Aligned_cols=92 Identities=15% Similarity=0.250 Sum_probs=75.9
Q ss_pred cCCcEEEecCCCChhHHHHHHHHHHh--------cC-----CCceEEEeecCcchhhhHHHHHHh--C-----------C
Q 008319 279 NQVDFYAVSFVKDAKVVHELKDYLKS--------CN-----ADIHVIVKIESADSIPNLHSIISA--S-----------D 332 (570)
Q Consensus 279 ~gvd~I~~SfV~sa~dv~~vr~~l~~--------~~-----~~i~IiaKIEt~~gv~NldeIl~~--s-----------D 332 (570)
..+..+.+||.++++|+.++..++++ .+ ..+.||.-+||.+.+.|.++|++. . -
T Consensus 138 ~aI~~yIISMT~sasDlL~V~~L~k~~aGL~~~e~g~~~~~~~i~VVPLFETieDL~~a~~Il~~ll~~~r~l~~~~~~Q 217 (560)
T 3odm_A 138 PAISEVVVPMIETGKEISEFQDRVNSVVDMGNKNYKTKLDLNSVRIIPLVEDVPALANIDRILDEHYEIEKSKGHILKDL 217 (560)
T ss_dssp CSCCEEEESSCCSHHHHHHHHHHHHHHHHHHHHHCSSCCCTTSSEEEEEECCHHHHHTTHHHHHHHHHHHHHTTCCCSEE
T ss_pred cccCeEEecCCCCHHHHHHHHHHHHHHhcccccccCCCCCCCCCCeECCcCCHHHHHhhHHHHHHHHHHHHHhcccCCeE
Confidence 45667899999999999988766632 12 257899999999999999999986 2 2
Q ss_pred EEEEcCCCcccCCCC----CCHHHHHHHHHHHHHHcCCCEEE
Q 008319 333 GAMVARGDLGAELPI----EDVPLLQEDIIRRCRSMQKPVIV 370 (570)
Q Consensus 333 gImIgrGDLg~eig~----~~v~~~qk~Ii~~c~~~gKPviv 370 (570)
-||+|+.|=+.+-|+ -.+..+|.++.+.|+++|.++..
T Consensus 218 eVMLGYSDSaKDgG~laS~waly~Aq~~L~~~~~e~gI~l~l 259 (560)
T 3odm_A 218 RIMIARSDTAMSYGLISGVLSVLMAVDGAYKWGEKHGVTISP 259 (560)
T ss_dssp EEEEESHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEEeeccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCcEEE
Confidence 799999888777776 36888999999999999999865
No 43
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=92.28 E-value=1.9 Score=42.17 Aligned_cols=137 Identities=12% Similarity=0.095 Sum_probs=86.2
Q ss_pred hhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHhCCEEEEcCCCcccCCCC-----
Q 008319 273 IKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPI----- 347 (570)
Q Consensus 273 I~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDgImIgrGDLg~eig~----- 347 (570)
++.+.+.|+|+|.+..-.=..++.++-+.+++.|..+.+...-.|+ ++.+++++..+|.|.+ ++++-|+
T Consensus 73 i~~~~~aGAd~itvh~Ea~~~~~~~~i~~i~~~G~k~gv~lnp~tp--~~~~~~~l~~~D~Vlv----msV~pGfggQ~f 146 (231)
T 3ctl_A 73 IAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETP--VEAMKYYIHKADKITV----MTVDPGFAGQPF 146 (231)
T ss_dssp HHHHHHHTCSEEEECGGGCTTTHHHHHHHHHHTTCEEEEEECTTCC--GGGGTTTGGGCSEEEE----ESSCTTCSSCCC
T ss_pred HHHHHHcCCCEEEECcccCCccHHHHHHHHHHcCCeEEEEEECCCc--HHHHHHHHhcCCEEEE----eeeccCcCCccc
Confidence 5666788999998775330346777777788877766665555554 7788889989998875 2333222
Q ss_pred -CCHHHHHHHHHHHHHHc--CCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec-ccccCCCC-HHHHHHHH
Q 008319 348 -EDVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS-GETAHGKF-PLKAVKVM 422 (570)
Q Consensus 348 -~~v~~~qk~Ii~~c~~~--gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs-~ETA~G~y-P~eaV~~m 422 (570)
+....-.+++-+...+. +.++.+. -.-.|.. +..++..|+|.+... +---...- |.++++.|
T Consensus 147 ~~~~l~kI~~lr~~~~~~~~~~~I~Vd--------GGI~~~~-----~~~~~~aGAd~~V~G~saif~~~d~~~~~~~~l 213 (231)
T 3ctl_A 147 IPEMLDKLAELKAWREREGLEYEIEVD--------GSCNQAT-----YEKLMAAGADVFIVGTSGLFNHAENIDEAWRIM 213 (231)
T ss_dssp CTTHHHHHHHHHHHHHHHTCCCEEEEE--------SCCSTTT-----HHHHHHHTCCEEEECTTTTGGGCSSHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhccCCCceEEEE--------CCcCHHH-----HHHHHHcCCCEEEEccHHHhCCCCcHHHHHHHH
Confidence 34444444554545444 4555442 2223333 556788999999985 43322334 99999999
Q ss_pred HHHHHH
Q 008319 423 HTVALR 428 (570)
Q Consensus 423 ~~I~~~ 428 (570)
++.+.+
T Consensus 214 ~~~~~~ 219 (231)
T 3ctl_A 214 TAQILA 219 (231)
T ss_dssp HHHHHC
T ss_pred HHHHHH
Confidence 876553
No 44
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=91.90 E-value=2.9 Score=40.24 Aligned_cols=141 Identities=11% Similarity=0.120 Sum_probs=81.2
Q ss_pred HhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHH---hCCEEEEcCCCcccCCCCC
Q 008319 272 DIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS---ASDGAMVARGDLGAELPIE 348 (570)
Q Consensus 272 dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~---~sDgImIgrGDLg~eig~~ 348 (570)
.++.+.+.|+|+|.+..-.+.+.+..+.+.+.+.| ..++.-+....-++.+++++. .+|.+.+..-.-|.. +-.
T Consensus 79 ~i~~~~~agad~v~vH~~~~~~~~~~~~~~i~~~g--~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~-g~~ 155 (228)
T 1h1y_A 79 YVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKG--MRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFG-GQK 155 (228)
T ss_dssp GHHHHHHHTCSEEEEEGGGCTTTHHHHHHHHHHTT--CEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCS-SCC
T ss_pred HHHHHHHcCCCEEEECCCCcccHHHHHHHHHHHcC--CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCCCC-ccc
Confidence 35666778999998886655544133334444444 455566643344677888988 799998854322211 110
Q ss_pred CHHHHHHHHHHHHHHc-CCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHH
Q 008319 349 DVPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVAL 427 (570)
Q Consensus 349 ~v~~~qk~Ii~~c~~~-gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~ 427 (570)
-.+...+++-+..+.. +.|+.++ -.-.|. .+..++..|+|++...+---....|.++++.|++.+.
T Consensus 156 ~~~~~l~~i~~~~~~~~~~pi~v~--------GGI~~~-----ni~~~~~aGaD~vvvGsai~~~~d~~~~~~~l~~~~~ 222 (228)
T 1h1y_A 156 FMPEMMEKVRALRKKYPSLDIEVD--------GGLGPS-----TIDVAASAGANCIVAGSSIFGAAEPGEVISALRKSVE 222 (228)
T ss_dssp CCGGGHHHHHHHHHHCTTSEEEEE--------SSCSTT-----THHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCCEEEE--------CCcCHH-----HHHHHHHcCCCEEEECHHHHCCCCHHHHHHHHHHHHH
Confidence 0111122222222223 7888764 333443 2445566699999986443344579999999988665
Q ss_pred H
Q 008319 428 R 428 (570)
Q Consensus 428 ~ 428 (570)
+
T Consensus 223 ~ 223 (228)
T 1h1y_A 223 G 223 (228)
T ss_dssp H
T ss_pred H
Confidence 3
No 45
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=90.71 E-value=3.1 Score=43.34 Aligned_cols=119 Identities=22% Similarity=0.316 Sum_probs=71.4
Q ss_pred HHHhhhhhhcCCcEEEe--cCCCChhHHHHHHHHHHhcCCCceEEE-eecCcchhhhHHHHHHh-CCEEEEc--CCCccc
Q 008319 270 WEDIKFGVDNQVDFYAV--SFVKDAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISA-SDGAMVA--RGDLGA 343 (570)
Q Consensus 270 ~~dI~~~~~~gvd~I~~--SfV~sa~dv~~vr~~l~~~~~~i~Iia-KIEt~~gv~NldeIl~~-sDgImIg--rGDLg~ 343 (570)
.+.++.+++.|+|+|.+ ++-.+...+..++..-+.. ++++++ .+-|++.. ....+. +|+|.+| +|....
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~--~~~Vivg~v~t~e~A---~~l~~aGaD~I~VG~~~Gs~~~ 181 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM--NIDVIVGNVVTEEAT---KELIENGADGIKVGIGPGSICT 181 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHC--CCEEEEEEECSHHHH---HHHHHTTCSEEEECSSCCTTCC
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhc--CCcEEEccCCCHHHH---HHHHHcCcCEEEEecCCCcCCC
Confidence 45667778899999986 3322322223333332222 577776 67666554 444445 9999996 442211
Q ss_pred -----CCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 344 -----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 344 -----eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
..+.+. .....++.+.++..+.|+|.+ ...-+ ..|++.++..|+|++|+.
T Consensus 182 tr~~~g~g~p~-~~~i~~v~~~~~~~~iPVIA~---------GGI~~---~~di~kala~GAd~V~vG 236 (361)
T 3khj_A 182 TRIVAGVGVPQ-ITAIEKCSSVASKFGIPIIAD---------GGIRY---SGDIGKALAVGASSVMIG 236 (361)
T ss_dssp HHHHTCBCCCH-HHHHHHHHHHHHHHTCCEEEE---------SCCCS---HHHHHHHHHHTCSEEEES
T ss_pred cccccCCCCCc-HHHHHHHHHHHhhcCCeEEEE---------CCCCC---HHHHHHHHHcCCCEEEEC
Confidence 112232 334456666677789999854 33322 357888999999999985
No 46
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=90.69 E-value=2.2 Score=46.34 Aligned_cols=123 Identities=19% Similarity=0.232 Sum_probs=75.8
Q ss_pred hhhHHHhhhhhhcCCcEEEecCC--CChhHHHHHHHHHHhcCCCceEEE-eecCcchhhhHHHHHHh-CCEEEEcCCCcc
Q 008319 267 DKDWEDIKFGVDNQVDFYAVSFV--KDAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISA-SDGAMVARGDLG 342 (570)
Q Consensus 267 ~kD~~dI~~~~~~gvd~I~~SfV--~sa~dv~~vr~~l~~~~~~i~Iia-KIEt~~gv~NldeIl~~-sDgImIgrGDLg 342 (570)
+.+.+.++..++.|+|.|.+... .+...+..++. +.+.-.++.|++ .+-|.+..+ ...+. +|+|.++=|.=+
T Consensus 230 ~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~-ir~~~p~~~Vi~g~v~t~e~a~---~l~~aGaD~I~Vg~g~Gs 305 (496)
T 4fxs_A 230 PGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRE-TRAAYPHLEIIGGNVATAEGAR---ALIEAGVSAVKVGIGPGS 305 (496)
T ss_dssp SCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHH-HHHHCTTCCEEEEEECSHHHHH---HHHHHTCSEEEECSSCCT
T ss_pred cchHHHHHHHHhccCceEEeccccccchHHHHHHHH-HHHHCCCceEEEcccCcHHHHH---HHHHhCCCEEEECCCCCc
Confidence 44567777778899999987543 22222223333 333333566666 476665544 34445 999998633222
Q ss_pred cC-------CCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 343 AE-------LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 343 ~e-------ig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
.. .+.+ -..+..++.+.|++.++|+|.+ ...-+ ..|++.++..|+|++|+.
T Consensus 306 ~~~tr~~~g~g~p-~~~~i~~v~~~~~~~~iPVIa~---------GGI~~---~~di~kala~GAd~V~iG 363 (496)
T 4fxs_A 306 ICTTRIVTGVGVP-QITAIADAAGVANEYGIPVIAD---------GGIRF---SGDISKAIAAGASCVMVG 363 (496)
T ss_dssp TBCHHHHHCCCCC-HHHHHHHHHHHHGGGTCCEEEE---------SCCCS---HHHHHHHHHTTCSEEEES
T ss_pred CcccccccCCCcc-HHHHHHHHHHHhccCCCeEEEe---------CCCCC---HHHHHHHHHcCCCeEEec
Confidence 11 1222 3345567788888889999964 23322 457888999999999985
No 47
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=90.66 E-value=2.1 Score=42.13 Aligned_cols=42 Identities=7% Similarity=0.158 Sum_probs=33.1
Q ss_pred HHHHHHHHHhCCcEE--EEecCCCChHHHHHHHHHHHHHHhhcC
Q 008319 114 REMIWKLAEEGMNVA--RLNMSHGDHASHQKTIDLVKEYNSQFE 155 (570)
Q Consensus 114 ~e~l~~li~~Gm~v~--RiN~sHg~~e~~~~~i~~ir~~~~~~~ 155 (570)
.+.+++.+++|++.. .+|....+.++..+.++.+.++.++++
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g 145 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWG 145 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcC
Confidence 677899999999999 888888777766666777776665555
No 48
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=90.66 E-value=3.7 Score=38.70 Aligned_cols=137 Identities=11% Similarity=0.107 Sum_probs=78.8
Q ss_pred HhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHhCCEEEE-c--CCCcccCCCCC
Q 008319 272 DIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMV-A--RGDLGAELPIE 348 (570)
Q Consensus 272 dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDgImI-g--rGDLg~eig~~ 348 (570)
.++.+.+.|+|+|.+.--.. +....+.+.+.+.| ..++.-+.+....+.+.++...+|.+++ + +|==|...+ +
T Consensus 76 ~i~~~~~~gad~v~vh~~~~-~~~~~~~~~~~~~g--~~i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g~~g~~~~-~ 151 (220)
T 2fli_A 76 YVEAFAQAGADIMTIHTEST-RHIHGALQKIKAAG--MKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQAFI-P 151 (220)
T ss_dssp GHHHHHHHTCSEEEEEGGGC-SCHHHHHHHHHHTT--SEEEEEECTTSCGGGGGGGTTTCSEEEEESSCTTCSSCCCC-G
T ss_pred HHHHHHHcCCCEEEEccCcc-ccHHHHHHHHHHcC--CcEEEEEcCCCCHHHHHHHHhhCCEEEEEEECCCCcccccC-H
Confidence 35667788999998764433 44555556665544 4455556433344555666666898865 2 221121122 1
Q ss_pred CHHHHHHHHHHHHHHc--CCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHH
Q 008319 349 DVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTV 425 (570)
Q Consensus 349 ~v~~~qk~Ii~~c~~~--gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I 425 (570)
....-.+++-+.+.+. +.|++++ -.-.| .++..+...|+|++...+---.+..|.++++.+.+.
T Consensus 152 ~~~~~i~~~~~~~~~~~~~~~i~v~--------GGI~~-----~~~~~~~~~Gad~vvvGsai~~~~d~~~a~~~~~~~ 217 (220)
T 2fli_A 152 ECLEKVATVAKWRDEKGLSFDIEVD--------GGVDN-----KTIRACYEAGANVFVAGSYLFKASDLVSQVQTLRTA 217 (220)
T ss_dssp GGHHHHHHHHHHHHHTTCCCEEEEE--------SSCCT-----TTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEE--------CcCCH-----HHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHH
Confidence 2222223333333333 5777653 33333 245556677999999886655667899999988764
No 49
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A
Probab=90.58 E-value=0.25 Score=57.36 Aligned_cols=145 Identities=17% Similarity=0.176 Sum_probs=103.2
Q ss_pred cCCcEEEecCCCChhHHHHHHHHHHhcCC--CceEEEeecCcchhhhHHHHHHh---CC----------EEEEcCCCccc
Q 008319 279 NQVDFYAVSFVKDAKVVHELKDYLKSCNA--DIHVIVKIESADSIPNLHSIISA---SD----------GAMVARGDLGA 343 (570)
Q Consensus 279 ~gvd~I~~SfV~sa~dv~~vr~~l~~~~~--~i~IiaKIEt~~gv~NldeIl~~---sD----------gImIgrGDLg~ 343 (570)
..+..+.+|+.+++.|+.++--+.++.|- .+.|++-.||.+.++|.++|++. .+ -||+|..|=+.
T Consensus 467 ~a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VvPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~qeVMlGYSDS~K 546 (883)
T 1jqn_A 467 GSIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAK 546 (883)
T ss_dssp TSEEEEEEETCCSHHHHHHHHHHHHTTTCCSCCCEEEEECSHHHHHHHHHHHHHHHHSHHHHHHTTTEEEEEECHHHHHH
T ss_pred hhcCeEEeCCCCCHHHHHHHHHHHHHhCCCCCcCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCeEEEEEeeccccc
Confidence 45667899999999999999888888875 58899999999999999999986 22 69999988777
Q ss_pred CCCC----CCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHH-------hCccEEEecccccC-
Q 008319 344 ELPI----EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVR-------EGADAVMLSGETAH- 411 (570)
Q Consensus 344 eig~----~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~-------~G~D~vmLs~ETA~- 411 (570)
+-|+ -.+..+|+++.+.|+++|.++.+.=-. ...|.|--.. -+.|+. .|.=-+--.||+-.
T Consensus 547 D~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lFhGR------GGsvgRGGgp-~~~ailaqp~gsv~g~~r~TeQGEvI~~ 619 (883)
T 1jqn_A 547 DAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGR------GGSIGRGGAP-AHAALLSQPPGSLKGGLRVTEQGEMIRF 619 (883)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECS------STGGGSCHHH-HHHHHHTSCTTTTTTCEEEEECGGGHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCC------CCCCCCCCCc-hHHHHHhCCCCCcCCceEEEecchHHHH
Confidence 7776 368899999999999999998764222 2333332222 123332 22333445565432
Q ss_pred -CCCHHHHHHHHHHHHHHhh
Q 008319 412 -GKFPLKAVKVMHTVALRTE 430 (570)
Q Consensus 412 -G~yP~eaV~~m~~I~~~aE 430 (570)
=.+|..|++.+..+...+-
T Consensus 620 kY~~p~~a~~nLe~~~~A~l 639 (883)
T 1jqn_A 620 KYGLPEITVSSLSLYTGAIL 639 (883)
T ss_dssp HHSSHHHHHHHHHHHHHHHH
T ss_pred hcCChHHHHHHHHHHHHHHH
Confidence 2458888887666655544
No 50
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=90.33 E-value=2.7 Score=43.99 Aligned_cols=119 Identities=17% Similarity=0.238 Sum_probs=69.5
Q ss_pred hhhHHHhhhhhhcCCcEEEe--cCCCChhHHHHHHHHHHhcCCCceEEEe-ecCcchhhhHHHHHHh-CCEEEEcCCC--
Q 008319 267 DKDWEDIKFGVDNQVDFYAV--SFVKDAKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVARGD-- 340 (570)
Q Consensus 267 ~kD~~dI~~~~~~gvd~I~~--SfV~sa~dv~~vr~~l~~~~~~i~IiaK-IEt~~gv~NldeIl~~-sDgImIgrGD-- 340 (570)
+.+.+.++.+++.|+|+|.+ +.-.+ +.+.+.-+.+++...+++|+++ +-|++... ...+. +|+|.++-|-
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a~G~~-~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~---~a~~aGaD~I~Vg~g~G~ 174 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVAHAHA-KYVGKTLKSLRQLLGSRCIMAGNVATYAGAD---YLASCGADIIKAGIGGGS 174 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCCSS-HHHHHHHHHHHHHHTTCEEEEEEECSHHHHH---HHHHTTCSEEEECCSSSS
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCCc-HhHHHHHHHHHHhcCCCeEEEcCcCCHHHHH---HHHHcCCCEEEEcCCCCc
Confidence 45667788888999999887 33222 2222222233332246889995 77765543 33444 9999995221
Q ss_pred ccc-----CCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 341 LGA-----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 341 Lg~-----eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
-.. ..+.+ |-..+..|.++.+|||.. ...- .-.|+..++..|+|+||+.
T Consensus 175 ~~~tr~~~g~g~p-----~l~aI~~~~~~~~PVIAd---------GGI~---~~~di~kALa~GAd~V~iG 228 (361)
T 3r2g_A 175 VCSTRIKTGFGVP-----MLTCIQDCSRADRSIVAD---------GGIK---TSGDIVKALAFGADFVMIG 228 (361)
T ss_dssp CHHHHHHHCCCCC-----HHHHHHHHTTSSSEEEEE---------SCCC---SHHHHHHHHHTTCSEEEES
T ss_pred CccccccCCccHH-----HHHHHHHHHHhCCCEEEE---------CCCC---CHHHHHHHHHcCCCEEEEC
Confidence 100 11222 334445555554588853 2222 2357889999999999985
No 51
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=90.26 E-value=6.6 Score=37.72 Aligned_cols=98 Identities=14% Similarity=0.131 Sum_probs=69.6
Q ss_pred hHHHHHHHHHHHhhcCC-cEEEEcCChHHHHHHHhcCCCCeEEEEeC------------CHHHHHHhccccCcEEEEecC
Q 008319 451 GDMFAFHSTTMANTLNT-PIIVFTRTGSMAVILSHYRPSSTIFAFTN------------QERIKQRLVLYQGVMPIYMQF 517 (570)
Q Consensus 451 ~~~ia~~av~~a~~~~a-~Iiv~T~sG~tA~~ls~~RP~~pIiavt~------------~~~taRrL~L~rGV~Pil~~~ 517 (570)
++.....|++-|.+++. .|||.|.||.||+++...-...-+++||+ ++.+.+.|. -.|+.-+....
T Consensus 28 T~~tl~la~era~e~~Ik~iVVAS~sG~TA~k~~e~~~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~-~~G~~V~t~tH 106 (201)
T 1vp8_A 28 TEETLRLAVERAKELGIKHLVVASSYGDTAMKALEMAEGLEVVVVTYHTGFVREGENTMPPEVEEELR-KRGAKIVRQSH 106 (201)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHCTTCEEEEEECCTTSSSTTCCSSCHHHHHHHH-HTTCEEEECCC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeCCChHHHHHHHHhcCCeEEEEeCcCCCCCCCCCcCCHHHHHHHH-hCCCEEEEEec
Confidence 45666778888999998 89999999999999999777789999994 455555553 34444433211
Q ss_pred ------------C--CCHHHHHHHHHH---------------HHHHcCCCCCCCEEEEEecC
Q 008319 518 ------------S--DDVEETFSRAIK---------------LLMDKNLVTKGEFVTLVQSG 550 (570)
Q Consensus 518 ------------~--~d~d~~i~~al~---------------~lke~Gllk~GD~VVvv~G~ 550 (570)
+ ....+.+..++. .+.+.|++.. +.|+.+.|.
T Consensus 107 ~lsgveR~is~kfGG~~p~eiiA~tLR~~fgqG~KV~vEi~lMAaDAGlIp~-eeVIAiGGT 167 (201)
T 1vp8_A 107 ILSGLERSISRKLGGVSRTEAIAEALRSLFGHGLKVCVEITIMAADSGAIPI-EEVVAVGGR 167 (201)
T ss_dssp TTTTTHHHHHHHTCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTSSCS-SCEEEEECS
T ss_pred cccchhHHHHHhcCCCCHHHHHHHHHHHHhcCCceEEEEEeeeecccCCCCc-ceEEEEccc
Confidence 0 134444555554 4568999999 889988884
No 52
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=89.53 E-value=2.4 Score=43.39 Aligned_cols=111 Identities=16% Similarity=0.211 Sum_probs=66.9
Q ss_pred HHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEE-cCCCcccCCCCC
Q 008319 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMV-ARGDLGAELPIE 348 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImI-grGDLg~eig~~ 348 (570)
+.++.+.+.|+|+|.+++-...+.+..+++ . .++++.++.+.+-. ..+.+. +|+|.+ |+ +-|-..|..
T Consensus 79 ~~~~~a~~~g~d~V~~~~g~p~~~i~~l~~----~--g~~v~~~v~~~~~a---~~~~~~GaD~i~v~g~-~~GG~~g~~ 148 (332)
T 2z6i_A 79 DIVDLVIEEGVKVVTTGAGNPSKYMERFHE----A--GIIVIPVVPSVALA---KRMEKIGADAVIAEGM-EAGGHIGKL 148 (332)
T ss_dssp HHHHHHHHTTCSEEEECSSCGGGTHHHHHH----T--TCEEEEEESSHHHH---HHHHHTTCSCEEEECT-TSSEECCSS
T ss_pred HHHHHHHHCCCCEEEECCCChHHHHHHHHH----c--CCeEEEEeCCHHHH---HHHHHcCCCEEEEECC-CCCCCCCCc
Confidence 456677889999999887544444444443 2 58899999776543 334444 899998 44 222222211
Q ss_pred CHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 349 DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 349 ~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
......+++. ...+.|++.+.- .-+ ..++..++..|+|++++.
T Consensus 149 ~~~~ll~~i~---~~~~iPViaaGG---------I~~---~~~~~~al~~GAdgV~vG 191 (332)
T 2z6i_A 149 TTMTLVRQVA---TAISIPVIAAGG---------IAD---GEGAAAGFMLGAEAVQVG 191 (332)
T ss_dssp CHHHHHHHHH---HHCSSCEEEESS---------CCS---HHHHHHHHHTTCSEEEEC
T ss_pred cHHHHHHHHH---HhcCCCEEEECC---------CCC---HHHHHHHHHcCCCEEEec
Confidence 1222223332 235799997632 222 235777888999999985
No 53
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=89.50 E-value=4.1 Score=40.82 Aligned_cols=155 Identities=13% Similarity=0.060 Sum_probs=91.4
Q ss_pred CChhhHHHhh-hhhhcCCcEEEecCCCChh------HHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEE
Q 008319 265 ITDKDWEDIK-FGVDNQVDFYAVSFVKDAK------VVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMV 336 (570)
Q Consensus 265 lt~kD~~dI~-~~~~~gvd~I~~SfV~sa~------dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImI 336 (570)
++..++..|. ...+.|++.|-+.+-.+.+ +..++-+.+.+. .++++.+.+-+ .+.++..++. .|.|+|
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~-~~~~v~~l~~n---~~~i~~a~~~G~~~V~i 98 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRA-DGVRYSVLVPN---MKGYEAAAAAHADEIAV 98 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-SSSEEEEECSS---HHHHHHHHHTTCSEEEE
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhC-CCCEEEEEeCC---HHHHHHHHHCCCCEEEE
Confidence 6777776654 4556899998775422333 233333333332 35666666522 3444444444 788887
Q ss_pred cCCCcccC---------CCCCCHHHHHHHHHHHHHHcCCCEE--EEccchhhhhcCCCcChHHHhHHHH-HHHhCccEEE
Q 008319 337 ARGDLGAE---------LPIEDVPLLQEDIIRRCRSMQKPVI--VATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVM 404 (570)
Q Consensus 337 grGDLg~e---------ig~~~v~~~qk~Ii~~c~~~gKPvi--vaTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vm 404 (570)
. ++.+ .+.++.....+++++.|+++|++|- +.|-. +......-+..++.+++. +...|+|.+.
T Consensus 99 ~---~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~--~~e~~~~~~~~~~~~~~~~~~~~G~d~i~ 173 (295)
T 1ydn_A 99 F---ISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVV--ECPYDGPVTPQAVASVTEQLFSLGCHEVS 173 (295)
T ss_dssp E---EESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSS--EETTTEECCHHHHHHHHHHHHHHTCSEEE
T ss_pred E---EecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEe--cCCcCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 3 3333 4556677777899999999999985 32110 000011122344444443 5578999999
Q ss_pred ecccccCCCCHHHHHHHHHHHHHHh
Q 008319 405 LSGETAHGKFPLKAVKVMHTVALRT 429 (570)
Q Consensus 405 Ls~ETA~G~yP~eaV~~m~~I~~~a 429 (570)
|. .|.=...|.+.-+.+..+....
T Consensus 174 l~-Dt~G~~~P~~~~~lv~~l~~~~ 197 (295)
T 1ydn_A 174 LG-DTIGRGTPDTVAAMLDAVLAIA 197 (295)
T ss_dssp EE-ETTSCCCHHHHHHHHHHHHTTS
T ss_pred ec-CCCCCcCHHHHHHHHHHHHHhC
Confidence 98 3443356998888888886544
No 54
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=89.49 E-value=6.7 Score=38.18 Aligned_cols=136 Identities=14% Similarity=0.033 Sum_probs=80.8
Q ss_pred hHHHhhhhhhcCCcEEEecC--CCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEEcCCCcccC-
Q 008319 269 DWEDIKFGVDNQVDFYAVSF--VKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAE- 344 (570)
Q Consensus 269 D~~dI~~~~~~gvd~I~~Sf--V~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrGDLg~e- 344 (570)
+.+++..+.+.|+|+|.+.- ..+++.+.++-+++++. .+.+++.+-|. +.+....+. +|.|.+.-..+...
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t~---eea~~a~~~Gad~Ig~~~~g~t~~~ 164 (232)
T 3igs_A 90 FLDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHH--HLLTMADCSSV---DDGLACQRLGADIIGTTMSGYTTPD 164 (232)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT--TCEEEEECCSH---HHHHHHHHTTCSEEECTTTTSSSSS
T ss_pred cHHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHC--CCEEEEeCCCH---HHHHHHHhCCCCEEEEcCccCCCCC
Confidence 34556667889999987643 34566666666666554 56677765443 233333334 88886532222111
Q ss_pred -CCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHH
Q 008319 345 -LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 423 (570)
Q Consensus 345 -ig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~ 423 (570)
.....+ ...+++ ++.++|++. ....-|. .|+..+...|+|++++. |++.+ |-+..+.+.
T Consensus 165 ~~~~~~~-~~i~~l----~~~~ipvIA---------~GGI~t~---~d~~~~~~~GadgV~VG--sal~~-p~~~~~~~~ 224 (232)
T 3igs_A 165 TPEEPDL-PLVKAL----HDAGCRVIA---------EGRYNSP---ALAAEAIRYGAWAVTVG--SAITR-LEHICGWYN 224 (232)
T ss_dssp CCSSCCH-HHHHHH----HHTTCCEEE---------ESCCCSH---HHHHHHHHTTCSEEEEC--HHHHC-HHHHHHHHH
T ss_pred CCCCCCH-HHHHHH----HhcCCcEEE---------ECCCCCH---HHHHHHHHcCCCEEEEe--hHhcC-HHHHHHHHH
Confidence 111233 222233 233899985 3444343 45777788899999995 66665 888888887
Q ss_pred HHHHHh
Q 008319 424 TVALRT 429 (570)
Q Consensus 424 ~I~~~a 429 (570)
+..+++
T Consensus 225 ~~i~~~ 230 (232)
T 3igs_A 225 DALKKA 230 (232)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 776554
No 55
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=89.42 E-value=3.3 Score=44.84 Aligned_cols=123 Identities=20% Similarity=0.212 Sum_probs=75.3
Q ss_pred hhhHHHhhhhhhcCCcEEEec--CCCChhHHHHHHHHHHhcCCCceEEEe-ecCcchhhhHHHHHHh-CCEEEEcCCCcc
Q 008319 267 DKDWEDIKFGVDNQVDFYAVS--FVKDAKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVARGDLG 342 (570)
Q Consensus 267 ~kD~~dI~~~~~~gvd~I~~S--fV~sa~dv~~vr~~l~~~~~~i~IiaK-IEt~~gv~NldeIl~~-sDgImIgrGDLg 342 (570)
+.+.+.++..++.|+|+|.+- .-.+......++. +.+.-.++++++. +-|.+.. ....+. +|+|.+|-|.=+
T Consensus 228 ~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~-i~~~~p~~~Vi~g~v~t~e~a---~~l~~aGaD~I~vg~g~Gs 303 (490)
T 4avf_A 228 ADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRW-VKQTFPDVQVIGGNIATAEAA---KALAEAGADAVKVGIGPGS 303 (490)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHH-HHHHCTTSEEEEEEECSHHHH---HHHHHTTCSEEEECSSCST
T ss_pred cchHHHHHHHhhcccceEEecccCCcchhHHHHHHH-HHHHCCCceEEEeeeCcHHHH---HHHHHcCCCEEEECCCCCc
Confidence 455677788889999998764 2223322223333 3333345677775 6666554 444445 999999633311
Q ss_pred c-------CCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 343 A-------ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 343 ~-------eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
. ..|.+. ..+..++.+.+++.++|+|.+ ...-+ ..|++.++..|+|++|+.
T Consensus 304 ~~~t~~~~g~g~p~-~~~l~~v~~~~~~~~iPVIa~---------GGI~~---~~di~kal~~GAd~V~vG 361 (490)
T 4avf_A 304 ICTTRIVAGVGVPQ-ISAIANVAAALEGTGVPLIAD---------GGIRF---SGDLAKAMVAGAYCVMMG 361 (490)
T ss_dssp TCHHHHHTCBCCCH-HHHHHHHHHHHTTTTCCEEEE---------SCCCS---HHHHHHHHHHTCSEEEEC
T ss_pred CCCccccCCCCccH-HHHHHHHHHHhccCCCcEEEe---------CCCCC---HHHHHHHHHcCCCeeeec
Confidence 1 122232 344567777777789999964 33322 357888999999999995
No 56
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=89.32 E-value=6.1 Score=42.78 Aligned_cols=120 Identities=23% Similarity=0.250 Sum_probs=72.6
Q ss_pred hhHHHhhhhhhcCCcEEEe--cCCCCh---hHHHHHHHHHHhcCCCceEEEe-ecCcchhhhHHHHHHh-CCEEEEcC--
Q 008319 268 KDWEDIKFGVDNQVDFYAV--SFVKDA---KVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVAR-- 338 (570)
Q Consensus 268 kD~~dI~~~~~~gvd~I~~--SfV~sa---~dv~~vr~~l~~~~~~i~IiaK-IEt~~gv~NldeIl~~-sDgImIgr-- 338 (570)
...+.++.+++.|+|+|.+ ++-... +.+..+++.+ .+++++++ +.|.+....+ .+. +|+|.++-
T Consensus 255 ~~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~----~~~pvi~~~v~t~~~a~~l---~~aGad~I~vg~~~ 327 (514)
T 1jcn_A 255 DDKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKY----PHLQVIGGNVVTAAQAKNL---IDAGVDGLRVGMGC 327 (514)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHC----TTCEEEEEEECSHHHHHHH---HHHTCSEEEECSSC
T ss_pred hhHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhC----CCCceEecccchHHHHHHH---HHcCCCEEEECCCC
Confidence 3566777788999999987 332222 2233333322 36788875 7666554443 334 99999953
Q ss_pred CCcccC-----CCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecc
Q 008319 339 GDLGAE-----LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (570)
Q Consensus 339 GDLg~e-----ig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (570)
|--... .|.+ .+.....+-+.++..+.|+|.+ ...- ...|+..++..|+|++++..
T Consensus 328 G~~~~t~~~~~~g~~-~~~~~~~~~~~~~~~~ipVia~---------GGI~---~~~di~kala~GAd~V~iG~ 388 (514)
T 1jcn_A 328 GSICITQEVMACGRP-QGTAVYKVAEYARRFGVPIIAD---------GGIQ---TVGHVVKALALGASTVMMGS 388 (514)
T ss_dssp SCCBTTBCCCSCCCC-HHHHHHHHHHHHGGGTCCEEEE---------SCCC---SHHHHHHHHHTTCSEEEEST
T ss_pred CcccccccccCCCcc-chhHHHHHHHHHhhCCCCEEEE---------CCCC---CHHHHHHHHHcCCCeeeECH
Confidence 311000 1222 2344455666667779999964 2222 24578899999999999863
No 57
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=88.67 E-value=7.4 Score=40.01 Aligned_cols=197 Identities=8% Similarity=-0.019 Sum_probs=112.0
Q ss_pred CCChhhHHHhhh-h-hhcCCcEEEe-cCCCChhHHHHHHHHHHh-----cCCCceEEEeecCcchhhhHHHHHHh-CCEE
Q 008319 264 SITDKDWEDIKF-G-VDNQVDFYAV-SFVKDAKVVHELKDYLKS-----CNADIHVIVKIESADSIPNLHSIISA-SDGA 334 (570)
Q Consensus 264 ~lt~kD~~dI~~-~-~~~gvd~I~~-SfV~sa~dv~~vr~~l~~-----~~~~i~IiaKIEt~~gv~NldeIl~~-sDgI 334 (570)
.++..|+..|.. . .+.|+|.|=+ +|+.++.+.+.+++..+. .-.+..+.+-+=+.. .++..++. .|.|
T Consensus 37 ~~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~l~~~~~---~i~~a~~~g~~~v 113 (337)
T 3ble_A 37 SFSTSEKLNIAKFLLQKLNVDRVEIASARVSKGELETVQKIMEWAATEQLTERIEILGFVDGNK---TVDWIKDSGAKVL 113 (337)
T ss_dssp CCCHHHHHHHHHHHHHTTCCSEEEEEETTSCTTHHHHHHHHHHHHHHTTCGGGEEEEEESSTTH---HHHHHHHHTCCEE
T ss_pred CcCHHHHHHHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhhhhhhccCCCCeEEEEccchh---hHHHHHHCCCCEE
Confidence 367778766543 4 4689999977 567778666655554431 223456666554443 55555555 6744
Q ss_pred --EEcCCCcc----cCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHH-HHHhCccEEEecc
Q 008319 335 --MVARGDLG----AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSG 407 (570)
Q Consensus 335 --mIgrGDLg----~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vmLs~ 407 (570)
+++--|+= ..+..++.....+++++.++++|+.|.+.... +-....-+...+.+++. +...|+|.+.|.
T Consensus 114 ~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~- 189 (337)
T 3ble_A 114 NLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLED---WSNGFRNSPDYVKSLVEHLSKEHIERIFLP- 189 (337)
T ss_dssp EEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEET---HHHHHHHCHHHHHHHHHHHHTSCCSEEEEE-
T ss_pred EEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE---CCCCCcCCHHHHHHHHHHHHHcCCCEEEEe-
Confidence 43333321 11233455667778999999999998765221 10011122333445444 556799999995
Q ss_pred cccCCCCHHHHHHHHHHHHHHh-hcCCCCCCCCCCcccCCCCChhHHHHHHHHHHHhhcCCcEEEEcCChHH
Q 008319 408 ETAHGKFPLKAVKVMHTVALRT-ESSLPVSITPPTQFSAHKSHMGDMFAFHSTTMANTLNTPIIVFTRTGSM 478 (570)
Q Consensus 408 ETA~G~yP~eaV~~m~~I~~~a-E~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~Iiv~T~sG~t 478 (570)
+|.=.-.|.++-+.+..+..+. ...+.. +. -++..- |.+-...|-+.++-+|=.|-.|.-
T Consensus 190 DT~G~~~P~~v~~lv~~l~~~~p~~~i~~--H~-------Hnd~Gl--A~AN~laAv~aGa~~vd~tv~GlG 250 (337)
T 3ble_A 190 DTLGVLSPEETFQGVDSLIQKYPDIHFEF--HG-------HNDYDL--SVANSLQAIRAGVKGLHASINGLG 250 (337)
T ss_dssp CTTCCCCHHHHHHHHHHHHHHCTTSCEEE--EC-------BCTTSC--HHHHHHHHHHTTCSEEEEBGGGCS
T ss_pred cCCCCcCHHHHHHHHHHHHHhcCCCeEEE--Ee-------cCCcch--HHHHHHHHHHhCCCEEEEeccccc
Confidence 7776678999999988887765 211111 11 122222 233344555567766666665543
No 58
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=88.61 E-value=3.5 Score=38.57 Aligned_cols=132 Identities=14% Similarity=0.113 Sum_probs=74.8
Q ss_pred hhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEee--cCcchhhhHHHHHHh-CCEEEEcCCCcccCCCCCC
Q 008319 273 IKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI--ESADSIPNLHSIISA-SDGAMVARGDLGAELPIED 349 (570)
Q Consensus 273 I~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKI--Et~~gv~NldeIl~~-sDgImIgrGDLg~eig~~~ 349 (570)
++.+.+.|+|+|.+......+.+.++++++.+.|..+. ++.. .|++. .++++.+. +|.+-+.++-.+...|..-
T Consensus 70 ~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~~g-v~~~s~~~p~~--~~~~~~~~g~d~v~~~~~~~~~~~g~~~ 146 (207)
T 3ajx_A 70 ADIAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKGVV-VDLIGIEDKAT--RAQEVRALGAKFVEMHAGLDEQAKPGFD 146 (207)
T ss_dssp HHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEE-EECTTCSSHHH--HHHHHHHTTCSEEEEECCHHHHTSTTCC
T ss_pred HHHHHhCCCCEEEEeccCChHHHHHHHHHHHHcCCceE-EEEecCCChHH--HHHHHHHhCCCEEEEEecccccccCCCc
Confidence 35567889999987655555677788888876655431 2222 12222 12333332 7888444444332233221
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHH
Q 008319 350 VPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 424 (570)
Q Consensus 350 v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~ 424 (570)
.. +++-+.+.. ..|+++. -...|. .+..++..|+|++...+--.....|.++++.+.+
T Consensus 147 ~~---~~i~~~~~~-~~pi~v~--------GGI~~~-----~~~~~~~aGad~vvvGsaI~~~~dp~~~~~~~~~ 204 (207)
T 3ajx_A 147 LN---GLLAAGEKA-RVPFSVA--------GGVKVA-----TIPAVQKAGAEVAVAGGAIYGAADPAAAAKELRA 204 (207)
T ss_dssp TH---HHHHHHHHH-TSCEEEE--------SSCCGG-----GHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHH
T ss_pred hH---HHHHHhhCC-CCCEEEE--------CCcCHH-----HHHHHHHcCCCEEEEeeeccCCCCHHHHHHHHHH
Confidence 11 333333333 6787753 233333 4666789999999986554445579888888764
No 59
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=88.54 E-value=1.2 Score=43.25 Aligned_cols=137 Identities=11% Similarity=0.091 Sum_probs=79.3
Q ss_pred HhhhhhhcCCcEEEecCC--CChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHhCCEEEEcCCCcccC--CCC
Q 008319 272 DIKFGVDNQVDFYAVSFV--KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAE--LPI 347 (570)
Q Consensus 272 dI~~~~~~gvd~I~~SfV--~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDgImIgrGDLg~e--ig~ 347 (570)
.++.+.+.|+|+|.+..- .. +...++.+.+.+.|..+.+...-.|+ .+.+++++..+|.|.++.-.-+.. --.
T Consensus 77 ~i~~~~~aGadgv~vh~e~~~~-~~~~~~~~~i~~~g~~~gv~~~p~t~--~e~~~~~~~~~D~v~~msv~pg~ggq~~~ 153 (230)
T 1tqj_A 77 YVEDFAKAGADIISVHVEHNAS-PHLHRTLCQIRELGKKAGAVLNPSTP--LDFLEYVLPVCDLILIMSVNPGFGGQSFI 153 (230)
T ss_dssp THHHHHHHTCSEEEEECSTTTC-TTHHHHHHHHHHTTCEEEEEECTTCC--GGGGTTTGGGCSEEEEESSCC----CCCC
T ss_pred HHHHHHHcCCCEEEECcccccc-hhHHHHHHHHHHcCCcEEEEEeCCCc--HHHHHHHHhcCCEEEEEEeccccCCccCc
Confidence 356667889999988854 32 44555555566555544444433554 556778888899887765333211 111
Q ss_pred CCHHHHHHHHHHHHHHc--CCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHH
Q 008319 348 EDVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 424 (570)
Q Consensus 348 ~~v~~~qk~Ii~~c~~~--gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~ 424 (570)
+......+++-+...+. +.|+.+. ..-.+.. +..+...|+|++..-+---....|.++++.|++
T Consensus 154 ~~~~~~i~~lr~~~~~~~~~~~I~v~--------GGI~~~~-----~~~~~~aGad~vvvGSai~~a~d~~~~~~~l~~ 219 (230)
T 1tqj_A 154 PEVLPKIRALRQMCDERGLDPWIEVD--------GGLKPNN-----TWQVLEAGANAIVAGSAVFNAPNYAEAIAGVRN 219 (230)
T ss_dssp GGGHHHHHHHHHHHHHHTCCCEEEEE--------SSCCTTT-----THHHHHHTCCEEEESHHHHTSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEE--------CCcCHHH-----HHHHHHcCCCEEEECHHHHCCCCHHHHHHHHHH
Confidence 23333334444444333 5676652 3333322 445567799999986543344579999988865
No 60
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=88.05 E-value=7.6 Score=38.48 Aligned_cols=74 Identities=11% Similarity=0.098 Sum_probs=50.6
Q ss_pred hhhHHH-hhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCC-CceEEEeec--C-cchhhhHHHHHHh-CCEEEEcCCC
Q 008319 267 DKDWED-IKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNA-DIHVIVKIE--S-ADSIPNLHSIISA-SDGAMVARGD 340 (570)
Q Consensus 267 ~kD~~d-I~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~-~i~IiaKIE--t-~~gv~NldeIl~~-sDgImIgrGD 340 (570)
++.+.. .+.+.+.|+|||..||-.+.++++++++.. +. .+..+.-|- | .++++|+.+.++. +||+.+||.=
T Consensus 158 ~~~i~~a~~~a~~~GAD~vkt~~~~~~e~~~~~~~~~---~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI 234 (263)
T 1w8s_A 158 PEIVAYAARIALELGADAMKIKYTGDPKTFSWAVKVA---GKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNV 234 (263)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCSSHHHHHHHHHHT---TTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHhC---CCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhh
Confidence 444443 356788999999999865677777666544 33 455555553 3 4567788888887 8999999865
Q ss_pred ccc
Q 008319 341 LGA 343 (570)
Q Consensus 341 Lg~ 343 (570)
+..
T Consensus 235 ~~~ 237 (263)
T 1w8s_A 235 WQR 237 (263)
T ss_dssp HTS
T ss_pred cCC
Confidence 443
No 61
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=87.96 E-value=4.5 Score=41.30 Aligned_cols=112 Identities=22% Similarity=0.278 Sum_probs=66.8
Q ss_pred HHHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEEcCCCcccCCC-C
Q 008319 270 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELP-I 347 (570)
Q Consensus 270 ~~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrGDLg~eig-~ 347 (570)
.+.++.+++.|+|+|.+++-...+.++.++ +. .++++.++-+.+-.. ...+. +|+|.+--.+.|-..| .
T Consensus 92 ~~~~~~~~~~g~d~V~l~~g~p~~~~~~l~----~~--g~~v~~~v~s~~~a~---~a~~~GaD~i~v~g~~~GG~~G~~ 162 (326)
T 3bo9_A 92 DDLVKVCIEEKVPVVTFGAGNPTKYIRELK----EN--GTKVIPVVASDSLAR---MVERAGADAVIAEGMESGGHIGEV 162 (326)
T ss_dssp HHHHHHHHHTTCSEEEEESSCCHHHHHHHH----HT--TCEEEEEESSHHHHH---HHHHTTCSCEEEECTTSSEECCSS
T ss_pred HHHHHHHHHCCCCEEEECCCCcHHHHHHHH----Hc--CCcEEEEcCCHHHHH---HHHHcCCCEEEEECCCCCccCCCc
Confidence 455667788999999988765544433333 32 578888886654433 33444 8999993222332222 1
Q ss_pred CCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 348 EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 348 ~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
..+ ...+++ .+..+.|++.+. ..-+ ..|+..++..|+|++++.
T Consensus 163 ~~~-~ll~~i---~~~~~iPviaaG---------GI~~---~~dv~~al~~GA~gV~vG 205 (326)
T 3bo9_A 163 TTF-VLVNKV---SRSVNIPVIAAG---------GIAD---GRGMAAAFALGAEAVQMG 205 (326)
T ss_dssp CHH-HHHHHH---HHHCSSCEEEES---------SCCS---HHHHHHHHHHTCSEEEES
T ss_pred cHH-HHHHHH---HHHcCCCEEEEC---------CCCC---HHHHHHHHHhCCCEEEec
Confidence 222 222222 234589999752 2222 346778888999999975
No 62
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=87.50 E-value=4 Score=40.12 Aligned_cols=134 Identities=14% Similarity=0.071 Sum_probs=80.2
Q ss_pred HHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhc---------CCCceEEEeecCcchhhhHHHHHHhCCEEEE---cC
Q 008319 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSC---------NADIHVIVKIESADSIPNLHSIISASDGAMV---AR 338 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~---------~~~i~IiaKIEt~~gv~NldeIl~~sDgImI---gr 338 (570)
.-++.+.+.|+|+|.+..-.+ .++..+-+.+.+. |..+.+...-+|+ ++.+++++..+|.|.+ .|
T Consensus 83 ~~i~~~~~aGAd~itvH~ea~-~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp--~~~l~~~l~~~D~vlvMsv~p 159 (237)
T 3cu2_A 83 EVAKAVVANGANLVTLQLEQY-HDFALTIEWLAKQKTTYANQVYPVLIGACLCPETP--ISELEPYLDQIDVIQLLTLDP 159 (237)
T ss_dssp HHHHHHHHTTCSEEEEETTCT-TSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSC--GGGGTTTTTTCSEEEEESEET
T ss_pred HHHHHHHHcCCCEEEEecCCc-ccHHHHHHHHHhcccccccccCCceEEEEEeCCCh--HHHHHHHhhcCceeeeeeecc
Confidence 445667789999988775443 5666666677665 4444444444565 6788888888998877 44
Q ss_pred CCcccCCCCCCHHHHHHHHHHHHHH---c--CCCEEEEccchhhhhcCCCcChHHHhHHHHHHH--hCccEEEecccccC
Q 008319 339 GDLGAELPIEDVPLLQEDIIRRCRS---M--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVR--EGADAVMLSGETAH 411 (570)
Q Consensus 339 GDLg~eig~~~v~~~qk~Ii~~c~~---~--gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~--~G~D~vmLs~ETA~ 411 (570)
| ++.. ...+...++|-+..+. . +.|+.+. -.-.+ ..+..++. .|+|++..-+---.
T Consensus 160 g-fggq---~f~~~~l~ki~~lr~~~~~~~~~~~I~vd--------GGI~~-----~~~~~~~~~~aGad~~VvGSaIf~ 222 (237)
T 3cu2_A 160 R-NGTK---YPSELILDRVIQVEKRLGNRRVEKLINID--------GSMTL-----ELAKYFKQGTHQIDWLVSGSALFS 222 (237)
T ss_dssp T-TTEE---CCHHHHHHHHHHHHHHHGGGGGGCEEEEE--------SSCCH-----HHHHHHHHSSSCCCCEEECGGGGS
T ss_pred C-cCCe---ecChhHHHHHHHHHHHHHhcCCCceEEEE--------CCcCH-----HHHHHHHHhCCCCcEEEEeeHHhC
Confidence 3 2211 2233344433333222 2 4666542 12221 23556678 89999998644333
Q ss_pred CCCHHHHHHHHHHH
Q 008319 412 GKFPLKAVKVMHTV 425 (570)
Q Consensus 412 G~yP~eaV~~m~~I 425 (570)
. -|.++++.+++.
T Consensus 223 ~-d~~~~~~~l~~~ 235 (237)
T 3cu2_A 223 G-ELKTNLKVWKSS 235 (237)
T ss_dssp S-CHHHHHHHHHHH
T ss_pred C-CHHHHHHHHHHh
Confidence 3 689999988754
No 63
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=87.48 E-value=9.7 Score=39.41 Aligned_cols=123 Identities=16% Similarity=0.184 Sum_probs=69.5
Q ss_pred hHHHhhhhhhc--CCcEEEecCC-CChhHHHHHHHHHHhcCCCceEEEe-ecCcchhhhHHHHHHh-CCEEEEcCCCccc
Q 008319 269 DWEDIKFGVDN--QVDFYAVSFV-KDAKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVARGDLGA 343 (570)
Q Consensus 269 D~~dI~~~~~~--gvd~I~~SfV-~sa~dv~~vr~~l~~~~~~i~IiaK-IEt~~gv~NldeIl~~-sDgImIgrGDLg~ 343 (570)
+.+.+...++. |+|.+.+.+- ....++.+.-+.+.+...+++++++ +-|+ +......+. +|+|.++-|-=+.
T Consensus 119 ~~~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~~~~~~vi~g~v~t~---e~A~~a~~aGaD~I~v~~g~G~~ 195 (351)
T 2c6q_A 119 DFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTG---EMVEELILSGADIIKVGIGPGSV 195 (351)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHHCTTSEEEEEEECSH---HHHHHHHHTTCSEEEECSSCSTT
T ss_pred HHHHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCeEEEEeCCCH---HHHHHHHHhCCCEEEECCCCCcC
Confidence 44555555565 8998766422 1233322222333333335677754 5543 334444445 9999886321000
Q ss_pred C-------CCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecc
Q 008319 344 E-------LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (570)
Q Consensus 344 e-------ig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (570)
+ .+.+ .......+.+.++..+.|||.+.- .- .-.|++.|+..|+|++++..
T Consensus 196 ~~~r~~~g~~~p-~~~~l~~v~~~~~~~~ipvIa~GG---------I~---~g~di~kAlalGA~~V~vG~ 253 (351)
T 2c6q_A 196 CTTRKKTGVGYP-QLSAVMECADAAHGLKGHIISDGG---------CS---CPGDVAKAFGAGADFVMLGG 253 (351)
T ss_dssp BCHHHHHCBCCC-HHHHHHHHHHHHHHTTCEEEEESC---------CC---SHHHHHHHHHTTCSEEEEST
T ss_pred cCccccCCCCcc-HHHHHHHHHHHHhhcCCcEEEeCC---------CC---CHHHHHHHHHcCCCceeccH
Confidence 1 1222 234446677777778999996422 22 24589999999999999853
No 64
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=86.68 E-value=9.3 Score=37.11 Aligned_cols=131 Identities=12% Similarity=0.026 Sum_probs=76.1
Q ss_pred HHHhhhhhhcCCcEEEecC--CCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEEcCCCcccC--
Q 008319 270 WEDIKFGVDNQVDFYAVSF--VKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAE-- 344 (570)
Q Consensus 270 ~~dI~~~~~~gvd~I~~Sf--V~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrGDLg~e-- 344 (570)
.+++..+.+.|+|+|.+-- ..+++.+.++-+++++. .+.+++.+-|. +.+....+. +|.|.+.-..+...
T Consensus 91 ~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t~---eea~~a~~~Gad~Ig~~~~g~t~~~~ 165 (229)
T 3q58_A 91 LQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLH--GLLAMADCSTV---NEGISCHQKGIEFIGTTLSGYTGPIT 165 (229)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT--TCEEEEECSSH---HHHHHHHHTTCSEEECTTTTSSSSCC
T ss_pred HHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHC--CCEEEEecCCH---HHHHHHHhCCCCEEEecCccCCCCCc
Confidence 4556667789999987643 23566666666666554 56677765443 233333333 88886532222211
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHH
Q 008319 345 LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 424 (570)
Q Consensus 345 ig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~ 424 (570)
...+.+ . .++..++.+.|++. ....-|. .|+..+...|+|++++. |++.+ |-...+.+.+
T Consensus 166 ~~~~~~-~----li~~l~~~~ipvIA---------~GGI~t~---~d~~~~~~~GadgV~VG--sai~~-p~~~~~~f~~ 225 (229)
T 3q58_A 166 PVEPDL-A----MVTQLSHAGCRVIA---------EGRYNTP---ALAANAIEHGAWAVTVG--SAITR-IEHICQWFSH 225 (229)
T ss_dssp CSSCCH-H----HHHHHHTTTCCEEE---------ESSCCSH---HHHHHHHHTTCSEEEEC--HHHHC-HHHHHHHHHH
T ss_pred CCCCCH-H----HHHHHHHcCCCEEE---------ECCCCCH---HHHHHHHHcCCCEEEEc--hHhcC-hHHHHHHHHH
Confidence 112233 2 22222333899985 3444444 45667788899999995 66665 7777777655
Q ss_pred H
Q 008319 425 V 425 (570)
Q Consensus 425 I 425 (570)
.
T Consensus 226 ~ 226 (229)
T 3q58_A 226 A 226 (229)
T ss_dssp H
T ss_pred H
Confidence 4
No 65
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=86.26 E-value=9.4 Score=35.99 Aligned_cols=136 Identities=11% Similarity=0.078 Sum_probs=73.8
Q ss_pred HHHhhhhhhcCCcEEEecCCC--Ch-hHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEEcCCCcccC-
Q 008319 270 WEDIKFGVDNQVDFYAVSFVK--DA-KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAE- 344 (570)
Q Consensus 270 ~~dI~~~~~~gvd~I~~SfV~--sa-~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrGDLg~e- 344 (570)
.+.+..+.+.|+|+|.+.... ++ +.+.++-+.+.+.-.+..++..+-|.+- +....+. +|.|+++.....-.
T Consensus 78 ~~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~t~~e---~~~~~~~G~d~i~~~~~g~t~~~ 154 (223)
T 1y0e_A 78 SKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADIATVEE---AKNAARLGFDYIGTTLHGYTSYT 154 (223)
T ss_dssp HHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEECSSHHH---HHHHHHTTCSEEECTTTTSSTTS
T ss_pred HHHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecCCCHHH---HHHHHHcCCCEEEeCCCcCcCCC
Confidence 455667788999998776432 22 2333333334333234566666655332 2222333 89998865433211
Q ss_pred CCCC-CHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHH
Q 008319 345 LPIE-DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 423 (570)
Q Consensus 345 ig~~-~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~ 423 (570)
.+.. ..+. .+.+-+.+...+.|++.. ...-+. .|+..++..|+|++++. +++-+ |.++.+.+.
T Consensus 155 ~~~~~~~~~-~~~~~~~~~~~~ipvia~---------GGI~~~---~~~~~~~~~Gad~v~vG--~al~~-p~~~~~~~~ 218 (223)
T 1y0e_A 155 QGQLLYQND-FQFLKDVLQSVDAKVIAE---------GNVITP---DMYKRVMDLGVHCSVVG--GAITR-PKEITKRFV 218 (223)
T ss_dssp TTCCTTHHH-HHHHHHHHHHCCSEEEEE---------SSCCSH---HHHHHHHHTTCSEEEEC--HHHHC-HHHHHHHHH
T ss_pred CCCCCCccc-HHHHHHHHhhCCCCEEEe---------cCCCCH---HHHHHHHHcCCCEEEEC--hHHcC-cHHHHHHHH
Confidence 1111 2222 223333344458998863 333333 35666778899999996 45444 877777765
Q ss_pred H
Q 008319 424 T 424 (570)
Q Consensus 424 ~ 424 (570)
+
T Consensus 219 ~ 219 (223)
T 1y0e_A 219 Q 219 (223)
T ss_dssp H
T ss_pred H
Confidence 4
No 66
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=85.93 E-value=6.8 Score=37.37 Aligned_cols=137 Identities=15% Similarity=0.154 Sum_probs=76.5
Q ss_pred HHhhhhhhcCCcEEEecCC--CChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHhCCEEEE---cCCCcccCC
Q 008319 271 EDIKFGVDNQVDFYAVSFV--KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMV---ARGDLGAEL 345 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV--~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDgImI---grGDLg~ei 345 (570)
+.++.+.+.|+|+|.+..- .+ ++..++.+.+.+.| ..++.-+-+..-.+.+.++...+|.|++ .+|--|...
T Consensus 82 ~~v~~~~~~Gad~v~vh~~~~~~-~~~~~~~~~~~~~g--~~ig~~~~p~t~~e~~~~~~~~~d~vl~~~~~pg~~g~~~ 158 (230)
T 1rpx_A 82 QRVPDFIKAGADIVSVHCEQSST-IHLHRTINQIKSLG--AKAGVVLNPGTPLTAIEYVLDAVDLVLIMSVNPGFGGQSF 158 (230)
T ss_dssp HHHHHHHHTTCSEEEEECSTTTC-SCHHHHHHHHHHTT--SEEEEEECTTCCGGGGTTTTTTCSEEEEESSCTTCSSCCC
T ss_pred HHHHHHHHcCCCEEEEEecCccc-hhHHHHHHHHHHcC--CcEEEEeCCCCCHHHHHHHHhhCCEEEEEEEcCCCCCccc
Confidence 3556667889999977754 33 34445555555544 3444444222234455566666897743 244223322
Q ss_pred CCCCHHHHHHHHHHHHHHc--CCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHH
Q 008319 346 PIEDVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 423 (570)
Q Consensus 346 g~~~v~~~qk~Ii~~c~~~--gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~ 423 (570)
. +......+++-+.+.+. ..|+++. -.-.|. .+..++..|+|++.+.+--.....|.++++.+.
T Consensus 159 ~-~~~~~~i~~l~~~~~~~~~~~pi~v~--------GGI~~~-----n~~~~~~aGad~vvvgSaI~~a~dp~~a~~~l~ 224 (230)
T 1rpx_A 159 I-ESQVKKISDLRKICAERGLNPWIEVD--------GGVGPK-----NAYKVIEAGANALVAGSAVFGAPDYAEAIKGIK 224 (230)
T ss_dssp C-TTHHHHHHHHHHHHHHHTCCCEEEEE--------SSCCTT-----THHHHHHHTCCEEEESHHHHTSSCHHHHHHHHH
T ss_pred c-HHHHHHHHHHHHHHHhcCCCceEEEE--------CCCCHH-----HHHHHHHcCCCEEEEChhhhCCCCHHHHHHHHH
Confidence 2 22222233333333322 6777663 333443 344567779999999866555567999888875
Q ss_pred H
Q 008319 424 T 424 (570)
Q Consensus 424 ~ 424 (570)
+
T Consensus 225 ~ 225 (230)
T 1rpx_A 225 T 225 (230)
T ss_dssp T
T ss_pred H
Confidence 4
No 67
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=84.82 E-value=2.5 Score=40.44 Aligned_cols=137 Identities=11% Similarity=0.060 Sum_probs=76.1
Q ss_pred hhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceE-EEeecCcchhhhHHHHHHh-CCEEEEcCCCcccCCCCCCHH
Q 008319 274 KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHV-IVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVP 351 (570)
Q Consensus 274 ~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~I-iaKIEt~~gv~NldeIl~~-sDgImIgrGDLg~eig~~~v~ 351 (570)
+.+.+.|+|+|.+.-....+.+.++.+.+++.|....+ +...-|. +.+.++.+. .|.+.+.+|-..-.-|..-.+
T Consensus 77 ~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~~~d~l~~~T~---~~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~ 153 (218)
T 3jr2_A 77 RMAFEAGADWITVSAAAHIATIAACKKVADELNGEIQIEIYGNWTM---QDAKAWVDLGITQAIYHRSRDAELAGIGWTT 153 (218)
T ss_dssp HHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECCSSCCH---HHHHHHHHTTCCEEEEECCHHHHHHTCCSCH
T ss_pred HHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCccceeeeecCCH---HHHHHHHHcCccceeeeeccccccCCCcCCH
Confidence 55568899999888655555567777777776655443 3334454 345555553 787666443221111111112
Q ss_pred HHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHH
Q 008319 352 LLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALR 428 (570)
Q Consensus 352 ~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~ 428 (570)
...++|- ..+..+.|+.+. -.-.|.. +..++..|+|++..-+--.....|.+++ .+.+..++
T Consensus 154 ~~l~~i~-~~~~~~~pi~v~--------GGI~~~~-----~~~~~~aGAd~vvvGsaI~~a~dp~~a~-~l~~~~~~ 215 (218)
T 3jr2_A 154 DDLDKMR-QLSALGIELSIT--------GGIVPED-----IYLFEGIKTKTFIAGRALAGAEGQQTAA-ALREQIDR 215 (218)
T ss_dssp HHHHHHH-HHHHTTCEEEEE--------SSCCGGG-----GGGGTTSCEEEEEESGGGSHHHHHHHHH-HHHHHHHH
T ss_pred HHHHHHH-HHhCCCCCEEEE--------CCCCHHH-----HHHHHHcCCCEEEEchhhcCCCCHHHHH-HHHHHHHh
Confidence 2223332 222346777753 3333333 2347888999999864333334688888 77766553
No 68
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=84.28 E-value=14 Score=37.11 Aligned_cols=161 Identities=13% Similarity=0.043 Sum_probs=91.4
Q ss_pred CCChhhHHHhh-hhhhcCCcEEEec-CCCCh-----hHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEE
Q 008319 264 SITDKDWEDIK-FGVDNQVDFYAVS-FVKDA-----KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAM 335 (570)
Q Consensus 264 ~lt~kD~~dI~-~~~~~gvd~I~~S-fV~sa-----~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgIm 335 (570)
.++..++..|. ...+.|++.|-+. |+... .|..++...+.+ ..++.+.+.+.+. +.++.-++. .|.|+
T Consensus 26 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~~~l~~~~---~~i~~a~~aG~~~v~ 101 (302)
T 2ftp_A 26 PIEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQ-RPGVTYAALAPNL---KGFEAALESGVKEVA 101 (302)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCC-CTTSEEEEECCSH---HHHHHHHHTTCCEEE
T ss_pred CCCHHHHHHHHHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhh-cCCCEEEEEeCCH---HHHHHHHhCCcCEEE
Confidence 35667776654 4456899998665 33221 243333333332 2456666665333 334444444 78777
Q ss_pred Ec-C-CCc----ccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHH-HHHhCccEEEeccc
Q 008319 336 VA-R-GDL----GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSGE 408 (570)
Q Consensus 336 Ig-r-GDL----g~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vmLs~E 408 (570)
|- . -|+ -..+++++.....+++++.|+++|+.|-..=-+.-+-.....-+..++.+++. +...|+|.+.|. .
T Consensus 102 i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~-D 180 (302)
T 2ftp_A 102 VFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLG-D 180 (302)
T ss_dssp EEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEEE-E
T ss_pred EEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEEe-C
Confidence 62 2 231 11245667778889999999999999842100000000011122334444443 457899999998 5
Q ss_pred ccCCCCHHHHHHHHHHHHHHh
Q 008319 409 TAHGKFPLKAVKVMHTVALRT 429 (570)
Q Consensus 409 TA~G~yP~eaV~~m~~I~~~a 429 (570)
|.=...|.+.-+.+..+....
T Consensus 181 T~G~~~P~~~~~lv~~l~~~~ 201 (302)
T 2ftp_A 181 TIGVGTAGATRRLIEAVASEV 201 (302)
T ss_dssp SSSCCCHHHHHHHHHHHTTTS
T ss_pred CCCCcCHHHHHHHHHHHHHhC
Confidence 554467998888888886544
No 69
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=83.55 E-value=12 Score=39.12 Aligned_cols=121 Identities=21% Similarity=0.290 Sum_probs=68.7
Q ss_pred hhHHHhhhhhhcCCcEEEe--cCCCChhHHHHHHHHHHhcCCCceEEE-eecCcchhhhHHHHHHh-CCEEEEcCCCccc
Q 008319 268 KDWEDIKFGVDNQVDFYAV--SFVKDAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISA-SDGAMVARGDLGA 343 (570)
Q Consensus 268 kD~~dI~~~~~~gvd~I~~--SfV~sa~dv~~vr~~l~~~~~~i~Iia-KIEt~~gv~NldeIl~~-sDgImIgrGDLg~ 343 (570)
.+.+.++.+++.|+|+|.+ ++- +++.+.++-+.+.+.-.+++|++ .+-+.+ .+....+. +|+|.++-+- |.
T Consensus 153 ~~~~~a~~~~~~G~d~i~i~~~~g-~~~~~~e~i~~ir~~~~~~pviv~~v~~~~---~a~~a~~~Gad~I~vg~~~-G~ 227 (404)
T 1eep_A 153 DTIERVEELVKAHVDILVIDSAHG-HSTRIIELIKKIKTKYPNLDLIAGNIVTKE---AALDLISVGADCLKVGIGP-GS 227 (404)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCC-SSHHHHHHHHHHHHHCTTCEEEEEEECSHH---HHHHHHTTTCSEEEECSSC-ST
T ss_pred hHHHHHHHHHHCCCCEEEEeCCCC-ChHHHHHHHHHHHHHCCCCeEEEcCCCcHH---HHHHHHhcCCCEEEECCCC-Cc
Confidence 3456677778899999987 332 33333333233333322567775 455543 33333344 8999995211 11
Q ss_pred --------CCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 344 --------ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 344 --------eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
..+.+. ......+.+.+...+.|||.+ ...-+ ..|+..++..|+|++++.
T Consensus 228 ~~~~~~~~~~g~p~-~~~l~~v~~~~~~~~ipVia~---------GGI~~---~~d~~~ala~GAd~V~iG 285 (404)
T 1eep_A 228 ICTTRIVAGVGVPQ-ITAICDVYEACNNTNICIIAD---------GGIRF---SGDVVKAIAAGADSVMIG 285 (404)
T ss_dssp TSHHHHHHCCCCCH-HHHHHHHHHHHTTSSCEEEEE---------SCCCS---HHHHHHHHHHTCSEEEEC
T ss_pred CcCccccCCCCcch-HHHHHHHHHHHhhcCceEEEE---------CCCCC---HHHHHHHHHcCCCHHhhC
Confidence 112222 233445555555578999864 22222 357888999999999984
No 70
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=83.39 E-value=15 Score=37.78 Aligned_cols=113 Identities=19% Similarity=0.238 Sum_probs=65.0
Q ss_pred HHHhhhhhhcCCcEEEecCCCC-hhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEE-cCC---Cccc
Q 008319 270 WEDIKFGVDNQVDFYAVSFVKD-AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMV-ARG---DLGA 343 (570)
Q Consensus 270 ~~dI~~~~~~gvd~I~~SfV~s-a~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImI-grG---DLg~ 343 (570)
.+.++.+.+.|+|+|.+.+-.. .+.++.+++ ..+.++.++-|.+- +....+. +|+|.+ ++. -.+.
T Consensus 112 ~~~~~~~~~~g~~~V~~~~g~~~~~~i~~~~~------~g~~v~~~v~t~~~---a~~a~~~GaD~i~v~g~~~GGh~g~ 182 (369)
T 3bw2_A 112 DAKLAVLLDDPVPVVSFHFGVPDREVIARLRR------AGTLTLVTATTPEE---ARAVEAAGADAVIAQGVEAGGHQGT 182 (369)
T ss_dssp HHHHHHHHHSCCSEEEEESSCCCHHHHHHHHH------TTCEEEEEESSHHH---HHHHHHTTCSEEEEECTTCSEECCC
T ss_pred HHHHHHHHhcCCCEEEEeCCCCcHHHHHHHHH------CCCeEEEECCCHHH---HHHHHHcCCCEEEEeCCCcCCcCCC
Confidence 3556777889999999887542 344444443 24678888866542 3333333 899999 652 1121
Q ss_pred CCCC-------CCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 344 ELPI-------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 344 eig~-------~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
..+. .......+++ ....++||+.+.- .-+ ..++..++..|+|+|++.
T Consensus 183 ~~~~~~~~~~~~~~~~~l~~i---~~~~~iPViaaGG---------I~~---~~~~~~~l~~GAd~V~vG 237 (369)
T 3bw2_A 183 HRDSSEDDGAGIGLLSLLAQV---REAVDIPVVAAGG---------IMR---GGQIAAVLAAGADAAQLG 237 (369)
T ss_dssp SSCCGGGTTCCCCHHHHHHHH---HHHCSSCEEEESS---------CCS---HHHHHHHHHTTCSEEEES
T ss_pred cccccccccccccHHHHHHHH---HHhcCceEEEECC---------CCC---HHHHHHHHHcCCCEEEEC
Confidence 1110 0112222232 2235899997522 212 245777888999999985
No 71
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=82.80 E-value=16 Score=35.45 Aligned_cols=116 Identities=12% Similarity=0.122 Sum_probs=72.5
Q ss_pred HHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEEcCCCcccCCCCCC
Q 008319 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIED 349 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrGDLg~eig~~~ 349 (570)
+.++.+++.|++.|-+.+ ++......++..-+.. .++.+-+-. .---+..+.-+++ +|+++.+--|
T Consensus 42 ~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~-~~~~igagt--vl~~d~~~~A~~aGAd~v~~p~~d--------- 108 (225)
T 1mxs_A 42 PLADALAAGGIRTLEVTL-RSQHGLKAIQVLREQR-PELCVGAGT--VLDRSMFAAVEAAGAQFVVTPGIT--------- 108 (225)
T ss_dssp HHHHHHHHTTCCEEEEES-SSTHHHHHHHHHHHHC-TTSEEEEEC--CCSHHHHHHHHHHTCSSEECSSCC---------
T ss_pred HHHHHHHHCCCCEEEEec-CCccHHHHHHHHHHhC-cccEEeeCe--EeeHHHHHHHHHCCCCEEEeCCCC---------
Confidence 455677889999999985 4454444444433333 355554432 2222455555555 8999865322
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHH---HHHHHHH
Q 008319 350 VPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAV---KVMHTVA 426 (570)
Q Consensus 350 v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV---~~m~~I~ 426 (570)
..+++.|+..|.|.+.- .-|. +++..|...|+|.+.+ ||.+.+ ++++.+.
T Consensus 109 -----~~v~~~~~~~g~~~i~G-----------~~t~---~e~~~A~~~Gad~vk~--------FPa~~~~G~~~lk~i~ 161 (225)
T 1mxs_A 109 -----EDILEAGVDSEIPLLPG-----------ISTP---SEIMMGYALGYRRFKL--------FPAEISGGVAAIKAFG 161 (225)
T ss_dssp -----HHHHHHHHHCSSCEECE-----------ECSH---HHHHHHHTTTCCEEEE--------TTHHHHTHHHHHHHHH
T ss_pred -----HHHHHHHHHhCCCEEEe-----------eCCH---HHHHHHHHCCCCEEEE--------ccCccccCHHHHHHHH
Confidence 36889999999998742 1222 3467889999999998 885543 5555554
No 72
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=82.76 E-value=12 Score=40.11 Aligned_cols=122 Identities=19% Similarity=0.264 Sum_probs=70.0
Q ss_pred hhHHHhhhhhhcCCcEEEecCCC--ChhHHHHHHHHHHhcCCCceEEEe-ecCcchhhhHHHHHHh-CCEEEEcCCCccc
Q 008319 268 KDWEDIKFGVDNQVDFYAVSFVK--DAKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVARGDLGA 343 (570)
Q Consensus 268 kD~~dI~~~~~~gvd~I~~SfV~--sa~dv~~vr~~l~~~~~~i~IiaK-IEt~~gv~NldeIl~~-sDgImIgrGDLg~ 343 (570)
...+.+.+.++.|+|.|.+.+.. ....+..++.+-+.. .+++++++ +-|.+. .....+. +|+|.++-|-=+.
T Consensus 237 ~~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~-p~~pvi~g~~~t~e~---a~~l~~~G~d~I~v~~~~G~~ 312 (494)
T 1vrd_A 237 ETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADY-PDLPVVAGNVATPEG---TEALIKAGADAVKVGVGPGSI 312 (494)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHC-TTSCEEEEEECSHHH---HHHHHHTTCSEEEECSSCSTT
T ss_pred hHHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHC-CCceEEeCCcCCHHH---HHHHHHcCCCEEEEcCCCCcc
Confidence 34567788889999999886542 222223333322222 24555543 444333 3333444 9999995431010
Q ss_pred -------CCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 344 -------ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 344 -------eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
.++.+. ......+.+.++..+.|+|.+ ...-+ ..|+..++..|+|++++.
T Consensus 313 ~~~~~~~~~g~p~-~~~l~~v~~~~~~~~ipvia~---------GGI~~---~~di~kala~GAd~V~iG 369 (494)
T 1vrd_A 313 CTTRVVAGVGVPQ-LTAVMECSEVARKYDVPIIAD---------GGIRY---SGDIVKALAAGAESVMVG 369 (494)
T ss_dssp CHHHHHHCCCCCH-HHHHHHHHHHHHTTTCCEEEE---------SCCCS---HHHHHHHHHTTCSEEEES
T ss_pred ccccccCCCCccH-HHHHHHHHHHHhhcCCCEEEE---------CCcCC---HHHHHHHHHcCCCEEEEC
Confidence 112222 344455666666679999964 22222 457889999999999985
No 73
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=82.49 E-value=4.3 Score=40.62 Aligned_cols=149 Identities=15% Similarity=0.150 Sum_probs=92.4
Q ss_pred CCCChhhHHHh-hhhhhc--CCcEEEecCCCChhHHHHHHHHHHhcCC-CceEEEeecCcchhhhHHHH-------HHh-
Q 008319 263 PSITDKDWEDI-KFGVDN--QVDFYAVSFVKDAKVVHELKDYLKSCNA-DIHVIVKIESADSIPNLHSI-------ISA- 330 (570)
Q Consensus 263 p~lt~kD~~dI-~~~~~~--gvd~I~~SfV~sa~dv~~vr~~l~~~~~-~i~IiaKIEt~~gv~NldeI-------l~~- 330 (570)
|..|+.|.+.+ +.+.++ +++.|+++ +..+...+++|...+. .+++.+-|=-|.|-.+.+.. ++.
T Consensus 23 p~~t~~~i~~lc~eA~~~~~~~~aVcV~----p~~v~~a~~~L~~~g~~~v~v~tVigFP~G~~~~~~Kv~E~~~Av~~G 98 (260)
T 1p1x_A 23 DDDTDEKVIALCHQAKTPVGNTAAICIY----PRFIPIARKTLKEQGTPEIRIATVTNFPHGNDDIDIALAETRAAIAYG 98 (260)
T ss_dssp TTCCHHHHHHHHHHTEETTEECSEEECC----GGGHHHHHHHHHHTTCTTSEEEEEESTTTCCSCHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHhccCCceEEEEC----HHHHHHHHHHhhhcCCCCceEEEEeCCCCCCCcHHHHHHHHHHHHHcC
Confidence 55677776544 567777 88888766 6667778888864344 68888777555544433322 222
Q ss_pred CCEEEE--cCCCcccCCCCCCHHHHHHHHHHHHHHcCCCE--EEEccchhhhhcCCCcChHH-HhH-HHHHHHhCccEEE
Q 008319 331 SDGAMV--ARGDLGAELPIEDVPLLQEDIIRRCRSMQKPV--IVATNMLESMIDHPTPTRAE-VSD-IAIAVREGADAVM 404 (570)
Q Consensus 331 sDgImI--grGDLg~eig~~~v~~~qk~Ii~~c~~~gKPv--ivaTqmLeSM~~~~~PtrAE-v~D-v~nav~~G~D~vm 404 (570)
+|.|=+ ..|-| .+=.++.+..-.+.+.+.|...|+|+ |+.|-.| +..| +.. .--+...|+|.|=
T Consensus 99 AdEIDmVinig~l-~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L---------~d~e~i~~a~~ia~eaGADfVK 168 (260)
T 1p1x_A 99 ADEVDVVFPYRAL-MAGNEQVGFDLVKACKEACAAANVLLKVIIETGEL---------KDEALIRKASEISIKAGADFIK 168 (260)
T ss_dssp CSEEEEECCHHHH-HTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHH---------CSHHHHHHHHHHHHHTTCSEEE
T ss_pred CCEEEEeccHHhh-hCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccC---------CcHHHHHHHHHHHHHhCCCEEE
Confidence 554422 12211 01112456666778888888778885 6555444 4455 322 3356788999987
Q ss_pred ecccccCCCC----HHHHHHHHHHHHHHh
Q 008319 405 LSGETAHGKF----PLKAVKVMHTVALRT 429 (570)
Q Consensus 405 Ls~ETA~G~y----P~eaV~~m~~I~~~a 429 (570)
-| .|.. -++.|+.|++.+++.
T Consensus 169 TS----TGf~~~gAt~e~v~lm~~~I~~~ 193 (260)
T 1p1x_A 169 TS----TGKVAVNATPESARIMMEVIRDM 193 (260)
T ss_dssp CC----CSCSSCCCCHHHHHHHHHHHHHH
T ss_pred eC----CCCCCCCCCHHHHHHHHHHHHHh
Confidence 55 4444 569999999988765
No 74
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=82.45 E-value=8.8 Score=38.02 Aligned_cols=128 Identities=14% Similarity=0.079 Sum_probs=76.2
Q ss_pred ChhhH-HHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchh----------hhHHHHHHh-CCE
Q 008319 266 TDKDW-EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSI----------PNLHSIISA-SDG 333 (570)
Q Consensus 266 t~kD~-~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv----------~NldeIl~~-sDg 333 (570)
+..|. +.+..+.+.|++.|+++ +..+.... ..+..++.++++..++ ...++.++. +|+
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v~----~~~v~~~~------~~~~~liv~~~~~~~~~g~~~~~~~~~~ve~Ai~~Ga~~ 108 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVFQ----RGIAEKYY------DGSVPLILKLNGKTTLYNGEPVSVANCSVEEAVSLGASA 108 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEEC----HHHHHHHC------CSSSCEEEECEECCTTCCSSCCCEESSCHHHHHHTTCSE
T ss_pred chhhHHHHHHHHHhhCCCEEEEC----HHHHHHhh------cCCCcEEEEEeCCCCcCCCCccchHHHHHHHHHHCCCCE
Confidence 44554 44467889999999988 22232222 3457788888776665 456777766 787
Q ss_pred EEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHH-HHHHHhCccEEEec
Q 008319 334 AMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDI-AIAVREGADAVMLS 406 (570)
Q Consensus 334 ImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv-~nav~~G~D~vmLs 406 (570)
|-+ |-.++ +-...++....+++.+.|+++|.|+|+=+. +.---.....+..++... --+...|+|.+=.+
T Consensus 109 v~~-~~nig-~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~-~~G~~~~~~~s~~~i~~a~~~a~~~GAD~vkt~ 179 (263)
T 1w8s_A 109 VGY-TIYPG-SGFEWKMFEELARIKRDAVKFDLPLVVESF-PRGGKVVNETAPEIVAYAARIALELGADAMKIK 179 (263)
T ss_dssp EEE-EECTT-STTHHHHHHHHHHHHHHHHHHTCCEEEEEC-CCSTTCCCTTCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred EEE-EEecC-CcCHHHHHHHHHHHHHHHHHcCCeEEEEee-CCCCccccCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 654 22233 112234556667899999999999986211 100000000033455443 45778999998887
No 75
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=82.37 E-value=7.7 Score=37.23 Aligned_cols=134 Identities=15% Similarity=0.184 Sum_probs=76.4
Q ss_pred HHHhhhhhhcCCcEEEec-----CCCC----hhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEEcCC
Q 008319 270 WEDIKFGVDNQVDFYAVS-----FVKD----AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARG 339 (570)
Q Consensus 270 ~~dI~~~~~~gvd~I~~S-----fV~s----a~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrG 339 (570)
.++++.+.+.|+|++-+- |+.. .+.++++++.. .....+=.++..++ +.++..+++ +|++.+--+
T Consensus 22 ~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~---~~~~~v~lmv~d~~--~~i~~~~~agad~v~vH~~ 96 (228)
T 1h1y_A 22 AAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHT---KAYLDCHLMVTNPS--DYVEPLAKAGASGFTFHIE 96 (228)
T ss_dssp HHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTC---CSEEEEEEESSCGG--GGHHHHHHHTCSEEEEEGG
T ss_pred HHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhc---CCcEEEEEEecCHH--HHHHHHHHcCCCEEEECCC
Confidence 356677778899987655 6665 44445554432 11233335776653 357888877 899977421
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHh---CccEEEeccc---ccCCC
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE---GADAVMLSGE---TAHGK 413 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~---G~D~vmLs~E---TA~G~ 413 (570)
. . +. ...+.++.+++.|+.++++. +|. |..| . ...+.. ++|.+++-+= +.--+
T Consensus 97 ~--~----~~---~~~~~~~~i~~~g~~igv~~--------~p~-t~~e--~-~~~~~~~~~~~d~vl~~sv~pg~~g~~ 155 (228)
T 1h1y_A 97 V--S----RD---NWQELIQSIKAKGMRPGVSL--------RPG-TPVE--E-VFPLVEAENPVELVLVMTVEPGFGGQK 155 (228)
T ss_dssp G--C----TT---THHHHHHHHHHTTCEEEEEE--------CTT-SCGG--G-GHHHHHSSSCCSEEEEESSCTTCSSCC
T ss_pred C--c----cc---HHHHHHHHHHHcCCCEEEEE--------eCC-CCHH--H-HHHHHhcCCCCCEEEEEeecCCCCccc
Confidence 1 0 11 11466777888999999862 221 1112 1 234555 9999987321 11224
Q ss_pred CHHHHHHHHHHHHHHh
Q 008319 414 FPLKAVKVMHTVALRT 429 (570)
Q Consensus 414 yP~eaV~~m~~I~~~a 429 (570)
|+...++.++++.+..
T Consensus 156 ~~~~~l~~i~~~~~~~ 171 (228)
T 1h1y_A 156 FMPEMMEKVRALRKKY 171 (228)
T ss_dssp CCGGGHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhc
Confidence 6656666666655444
No 76
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=82.31 E-value=10 Score=44.62 Aligned_cols=120 Identities=14% Similarity=0.264 Sum_probs=67.4
Q ss_pred hhhhhhcCCcEEEecCC---------------CChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-----CC
Q 008319 273 IKFGVDNQVDFYAVSFV---------------KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-----SD 332 (570)
Q Consensus 273 I~~~~~~gvd~I~~SfV---------------~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-----sD 332 (570)
++.+.+.|+|+|.+.+- ++++.+.++-+.+.+. .+++|++|+ ++ .+.++.++++. +|
T Consensus 654 a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~-~~~Pv~vK~-~~-~~~~~~~~a~~~~~~G~d 730 (1025)
T 1gte_A 654 SRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQA-VQIPFFAKL-TP-NVTDIVSIARAAKEGGAD 730 (1025)
T ss_dssp HHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHH-CSSCEEEEE-CS-CSSCHHHHHHHHHHHTCS
T ss_pred HHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHh-hCCceEEEe-CC-ChHHHHHHHHHHHHcCCC
Confidence 34555789999988542 2333333333334332 257899998 33 44456666554 89
Q ss_pred EEEEc-----------------------CCCcccCCCCCCHHHHHHHHHHHHHHc-CCCEEEEccchhhhhcCCCcChHH
Q 008319 333 GAMVA-----------------------RGDLGAELPIEDVPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAE 388 (570)
Q Consensus 333 gImIg-----------------------rGDLg~eig~~~v~~~qk~Ii~~c~~~-gKPvivaTqmLeSM~~~~~PtrAE 388 (570)
+|.+. |...+---|....+.....+-+..+.. +.|+|.. ...-+
T Consensus 731 ~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~~ipvi~~---------GGI~s--- 798 (1025)
T 1gte_A 731 GVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILAT---------GGIDS--- 798 (1025)
T ss_dssp EEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTTCCEEEE---------SSCCS---
T ss_pred EEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHcCCCCEEEe---------cCcCC---
Confidence 99982 111111112223333333333334444 7898863 33333
Q ss_pred HhHHHHHHHhCccEEEecc
Q 008319 389 VSDIAIAVREGADAVMLSG 407 (570)
Q Consensus 389 v~Dv~nav~~G~D~vmLs~ 407 (570)
..|+..++..|+|+||+..
T Consensus 799 ~~da~~~l~~Ga~~v~vg~ 817 (1025)
T 1gte_A 799 AESGLQFLHSGASVLQVCS 817 (1025)
T ss_dssp HHHHHHHHHTTCSEEEESH
T ss_pred HHHHHHHHHcCCCEEEEee
Confidence 3567788889999999953
No 77
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=81.72 E-value=12 Score=37.96 Aligned_cols=112 Identities=14% Similarity=0.163 Sum_probs=63.5
Q ss_pred HHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEE-cCCCcccCCCCC
Q 008319 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMV-ARGDLGAELPIE 348 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImI-grGDLg~eig~~ 348 (570)
+.++.+.+.|+|+|.+.+-...+.+.. +++. .++++.++-|.+-. ....+. +|+|.+ |+. -+-..|..
T Consensus 87 ~~~~~~~~~g~d~V~~~~g~p~~~~~~----l~~~--gi~vi~~v~t~~~a---~~~~~~GaD~i~v~g~~-~GG~~G~~ 156 (328)
T 2gjl_A 87 EYRAAIIEAGIRVVETAGNDPGEHIAE----FRRH--GVKVIHKCTAVRHA---LKAERLGVDAVSIDGFE-CAGHPGED 156 (328)
T ss_dssp HHHHHHHHTTCCEEEEEESCCHHHHHH----HHHT--TCEEEEEESSHHHH---HHHHHTTCSEEEEECTT-CSBCCCSS
T ss_pred HHHHHHHhcCCCEEEEcCCCcHHHHHH----HHHc--CCCEEeeCCCHHHH---HHHHHcCCCEEEEECCC-CCcCCCCc
Confidence 556677889999999887544333333 4333 57888887665432 223333 899998 431 12111211
Q ss_pred CHHHHHHHHHHHHH-HcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 349 DVPLLQEDIIRRCR-SMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 349 ~v~~~qk~Ii~~c~-~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
..+.. ..+...+ ..+.|++.+.- .-+ -.|+..++..|+|++++.
T Consensus 157 ~~~~~--~~l~~v~~~~~iPviaaGG---------I~~---~~~v~~al~~GAdgV~vG 201 (328)
T 2gjl_A 157 DIPGL--VLLPAAANRLRVPIIASGG---------FAD---GRGLVAALALGADAINMG 201 (328)
T ss_dssp CCCHH--HHHHHHHTTCCSCEEEESS---------CCS---HHHHHHHHHHTCSEEEES
T ss_pred cccHH--HHHHHHHHhcCCCEEEECC---------CCC---HHHHHHHHHcCCCEEEEC
Confidence 11111 2223333 34799997632 222 235777788899999985
No 78
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=81.46 E-value=16 Score=35.38 Aligned_cols=103 Identities=14% Similarity=0.178 Sum_probs=66.6
Q ss_pred HHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEEcCCCcccCCCCCC
Q 008319 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIED 349 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrGDLg~eig~~~ 349 (570)
+.++.+++.|++.|-+.+ ++......++.+-+.. .++.+-+-. .---+.++.-+++ +|+++.+-.|
T Consensus 33 ~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~-~~l~vgaGt--vl~~d~~~~A~~aGAd~v~~p~~d--------- 99 (224)
T 1vhc_A 33 PLADTLAKNGLSVAEITF-RSEAAADAIRLLRANR-PDFLIAAGT--VLTAEQVVLAKSSGADFVVTPGLN--------- 99 (224)
T ss_dssp HHHHHHHHTTCCEEEEET-TSTTHHHHHHHHHHHC-TTCEEEEES--CCSHHHHHHHHHHTCSEEECSSCC---------
T ss_pred HHHHHHHHcCCCEEEEec-cCchHHHHHHHHHHhC-cCcEEeeCc--EeeHHHHHHHHHCCCCEEEECCCC---------
Confidence 455677889999999985 4555555555444443 345544432 2222555555555 9999765333
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEe
Q 008319 350 VPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 405 (570)
Q Consensus 350 v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL 405 (570)
..+++.|++.|+|++.- ..|. +++..|...|+|.+.+
T Consensus 100 -----~~v~~~ar~~g~~~i~G-----------v~t~---~e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 100 -----PKIVKLCQDLNFPITPG-----------VNNP---MAIEIALEMGISAVKF 136 (224)
T ss_dssp -----HHHHHHHHHTTCCEECE-----------ECSH---HHHHHHHHTTCCEEEE
T ss_pred -----HHHHHHHHHhCCCEEec-----------cCCH---HHHHHHHHCCCCEEEE
Confidence 45788999999998752 1222 2366788999999999
No 79
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=81.06 E-value=14 Score=35.57 Aligned_cols=103 Identities=17% Similarity=0.164 Sum_probs=66.2
Q ss_pred HHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEEcCCCcccCCCCCC
Q 008319 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIED 349 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrGDLg~eig~~~ 349 (570)
+.++.+++.|++.|-+.+ ++......++..-+.. .+..+-+-. .---+..+.-+++ +|+++.+--|
T Consensus 32 ~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~-~~~~vgagt--vi~~d~~~~A~~aGAd~v~~p~~d--------- 98 (214)
T 1wbh_A 32 PMAKALVAGGVRVLNVTL-RTECAVDAIRAIAKEV-PEAIVGAGT--VLNPQQLAEVTEAGAQFAISPGLT--------- 98 (214)
T ss_dssp HHHHHHHHTTCCEEEEES-CSTTHHHHHHHHHHHC-TTSEEEEES--CCSHHHHHHHHHHTCSCEEESSCC---------
T ss_pred HHHHHHHHcCCCEEEEeC-CChhHHHHHHHHHHHC-cCCEEeeCE--EEEHHHHHHHHHcCCCEEEcCCCC---------
Confidence 555677889999999985 4444444444443333 344544432 2222555555555 9999876322
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEe
Q 008319 350 VPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 405 (570)
Q Consensus 350 v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL 405 (570)
..+++.|++.|.|++.- ..| .+++..|...|+|.+.+
T Consensus 99 -----~~v~~~~~~~g~~~i~G-----------~~t---~~e~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 99 -----EPLLKAATEGTIPLIPG-----------IST---VSELMLGMDYGLKEFKF 135 (214)
T ss_dssp -----HHHHHHHHHSSSCEEEE-----------ESS---HHHHHHHHHTTCCEEEE
T ss_pred -----HHHHHHHHHhCCCEEEe-----------cCC---HHHHHHHHHCCCCEEEE
Confidence 36889999999998853 122 23467788999999998
No 80
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=80.86 E-value=11 Score=35.88 Aligned_cols=102 Identities=13% Similarity=0.109 Sum_probs=64.5
Q ss_pred HHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEEcCCCcccCCCCCC
Q 008319 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIED 349 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrGDLg~eig~~~ 349 (570)
+.++.+++.|++.|-+.+ ++......++. +.+ .+..+-+-. .---+.++.-++. +|++..+-.|
T Consensus 29 ~~~~~l~~gGv~~iel~~-k~~~~~~~i~~-~~~--~~~~~gag~--vl~~d~~~~A~~~GAd~v~~~~~d--------- 93 (207)
T 2yw3_A 29 GLARVLEEEGVGALEITL-RTEKGLEALKA-LRK--SGLLLGAGT--VRSPKEAEAALEAGAAFLVSPGLL--------- 93 (207)
T ss_dssp HHHHHHHHTTCCEEEEEC-SSTHHHHHHHH-HTT--SSCEEEEES--CCSHHHHHHHHHHTCSEEEESSCC---------
T ss_pred HHHHHHHHcCCCEEEEeC-CChHHHHHHHH-HhC--CCCEEEeCe--EeeHHHHHHHHHcCCCEEEcCCCC---------
Confidence 445667789999999985 45544444443 333 444444433 2222555555555 8999865322
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 350 VPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 350 v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
..+++.|++.|.|++.- ..| .+++..+...|+|.+-+-
T Consensus 94 -----~~v~~~~~~~g~~~i~G-----------~~t---~~e~~~A~~~Gad~v~~f 131 (207)
T 2yw3_A 94 -----EEVAALAQARGVPYLPG-----------VLT---PTEVERALALGLSALKFF 131 (207)
T ss_dssp -----HHHHHHHHHHTCCEEEE-----------ECS---HHHHHHHHHTTCCEEEET
T ss_pred -----HHHHHHHHHhCCCEEec-----------CCC---HHHHHHHHHCCCCEEEEe
Confidence 26788899999998853 122 234667889999999883
No 81
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=80.78 E-value=16 Score=34.40 Aligned_cols=131 Identities=11% Similarity=0.037 Sum_probs=72.3
Q ss_pred hhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEEcCCCcccCC-CCCCHH
Q 008319 274 KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAEL-PIEDVP 351 (570)
Q Consensus 274 ~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrGDLg~ei-g~~~v~ 351 (570)
..+.+.|+|+|-+..- ...+..+++.. . ...+.+-+.|.+ .+.+.... +|.|++++.--+... +.. +
T Consensus 82 ~~a~~~gad~v~l~~~--~~~~~~~~~~~---~-~~~ig~sv~t~~---~~~~a~~~gaD~i~~~~~f~~~~~~g~~--~ 150 (221)
T 1yad_A 82 DIALFSTIHRVQLPSG--SFSPKQIRARF---P-HLHIGRSVHSLE---EAVQAEKEDADYVLFGHVFETDCKKGLE--G 150 (221)
T ss_dssp HHHHTTTCCEEEECTT--SCCHHHHHHHC---T-TCEEEEEECSHH---HHHHHHHTTCSEEEEECCC------------
T ss_pred HHHHHcCCCEEEeCCC--ccCHHHHHHHC---C-CCEEEEEcCCHH---HHHHHHhCCCCEEEECCccccCCCCCCC--C
Confidence 4466789999988743 23345555543 1 445555554433 22222223 899999873111111 000 1
Q ss_pred HHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHH
Q 008319 352 LLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALR 428 (570)
Q Consensus 352 ~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~ 428 (570)
.-.+.+-+.++..+.|++.+. .. +. .++..++..|+|++.+.+--...+.|.++++.+.+.+++
T Consensus 151 ~~~~~l~~~~~~~~~pvia~G---------GI-~~---~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~~ 214 (221)
T 1yad_A 151 RGVSLLSDIKQRISIPVIAIG---------GM-TP---DRLRDVKQAGADGIAVMSGIFSSAEPLEAARRYSRKLKE 214 (221)
T ss_dssp CHHHHHHHHHHHCCSCEEEES---------SC-CG---GGHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCCEEEEC---------CC-CH---HHHHHHHHcCCCEEEEhHHhhCCCCHHHHHHHHHHHHHH
Confidence 111223333344589988752 22 32 346677788999999876554445688888888776654
No 82
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=80.50 E-value=14 Score=36.83 Aligned_cols=131 Identities=17% Similarity=0.126 Sum_probs=77.7
Q ss_pred HhhhhhhcCCcEEEec-CCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEEcCCCcccC-CCCC
Q 008319 272 DIKFGVDNQVDFYAVS-FVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAE-LPIE 348 (570)
Q Consensus 272 dI~~~~~~gvd~I~~S-fV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrGDLg~e-ig~~ 348 (570)
.+..+...|+|+|.+. -.-+.+++.++.++..+.|. .+++-+-|.+- ++..++. +|.|-+...||... .+++
T Consensus 127 qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~~lGl--~~lvev~t~ee---~~~A~~~Gad~IGv~~r~l~~~~~dl~ 201 (272)
T 3qja_A 127 QIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGM--TALVEVHTEQE---ADRALKAGAKVIGVNARDLMTLDVDRD 201 (272)
T ss_dssp HHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHHTTC--EEEEEESSHHH---HHHHHHHTCSEEEEESBCTTTCCBCTT
T ss_pred HHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHCCC--cEEEEcCCHHH---HHHHHHCCCCEEEECCCcccccccCHH
Confidence 4566778999999872 22345666666666666544 35554444332 3333333 89999987776432 2332
Q ss_pred CHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHH
Q 008319 349 DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 424 (570)
Q Consensus 349 ~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~ 424 (570)
.+ +++..... .++|++. ....-|. .|+..+...|+|+++...---....|-++++.+..
T Consensus 202 ~~----~~l~~~v~-~~~pvVa---------egGI~t~---edv~~l~~~GadgvlVGsal~~a~dp~~~~~~l~~ 260 (272)
T 3qja_A 202 CF----ARIAPGLP-SSVIRIA---------ESGVRGT---ADLLAYAGAGADAVLVGEGLVTSGDPRAAVADLVT 260 (272)
T ss_dssp HH----HHHGGGSC-TTSEEEE---------ESCCCSH---HHHHHHHHTTCSEEEECHHHHTCSCHHHHHHHHHT
T ss_pred HH----HHHHHhCc-ccCEEEE---------ECCCCCH---HHHHHHHHcCCCEEEEcHHHhCCCCHHHHHHHHHh
Confidence 22 22222111 1677774 3444444 35667788899999985443356689888888654
No 83
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=80.45 E-value=25 Score=35.51 Aligned_cols=116 Identities=18% Similarity=0.255 Sum_probs=61.2
Q ss_pred cCCcEEEecCCC----------Ch----hHHHHHHHHHHh----cCCCceEEEeecCcchhhhHHHHHHh-----CCEEE
Q 008319 279 NQVDFYAVSFVK----------DA----KVVHELKDYLKS----CNADIHVIVKIESADSIPNLHSIISA-----SDGAM 335 (570)
Q Consensus 279 ~gvd~I~~SfV~----------sa----~dv~~vr~~l~~----~~~~i~IiaKIEt~~gv~NldeIl~~-----sDgIm 335 (570)
.|+|+|-+.|-. +. +.+..+++...+ .+.+.+|+.||=.-...+++.++++. +|+|.
T Consensus 164 ~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~ 243 (336)
T 1f76_A 164 AYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVI 243 (336)
T ss_dssp GGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEE
T ss_pred ccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEE
Confidence 489998776521 11 233344444321 14578999997422122244444433 89999
Q ss_pred EcCCCccc----------CCC-CC--CHHHHHHHHHHHHHH-c--CCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhC
Q 008319 336 VARGDLGA----------ELP-IE--DVPLLQEDIIRRCRS-M--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREG 399 (570)
Q Consensus 336 IgrGDLg~----------eig-~~--~v~~~qk~Ii~~c~~-~--gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G 399 (570)
+.-+-.+. +.+ +. .+....-..+...++ . +.|||.. ...-+ ..|+..++..|
T Consensus 244 vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~---------GGI~~---~~da~~~l~~G 311 (336)
T 1f76_A 244 ATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGV---------GGIDS---VIAAREKIAAG 311 (336)
T ss_dssp ECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEE---------SSCCS---HHHHHHHHHHT
T ss_pred EeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEE---------CCCCC---HHHHHHHHHCC
Confidence 85321111 110 11 112223334444443 3 7899864 33323 34677888999
Q ss_pred ccEEEec
Q 008319 400 ADAVMLS 406 (570)
Q Consensus 400 ~D~vmLs 406 (570)
+|+|++.
T Consensus 312 Ad~V~ig 318 (336)
T 1f76_A 312 ASLVQIY 318 (336)
T ss_dssp CSEEEES
T ss_pred CCEEEee
Confidence 9999995
No 84
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=80.42 E-value=38 Score=32.91 Aligned_cols=135 Identities=13% Similarity=0.078 Sum_probs=76.8
Q ss_pred HHhhhhhhcCCcEE--Eec-CCCChh----HHHHHHHHHHhcCCCceEEEeecCcch--------hhhHHHHHHh-----
Q 008319 271 EDIKFGVDNQVDFY--AVS-FVKDAK----VVHELKDYLKSCNADIHVIVKIESADS--------IPNLHSIISA----- 330 (570)
Q Consensus 271 ~dI~~~~~~gvd~I--~~S-fV~sa~----dv~~vr~~l~~~~~~i~IiaKIEt~~g--------v~NldeIl~~----- 330 (570)
+.++.+++.|+|.| .+. ...+.+ ++.++.+...+.| ++++..+- +.| .+++++.+..
T Consensus 103 ~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g--~~viv~~~-~~G~~l~~~~~~~~~~~~a~~a~~~G 179 (273)
T 2qjg_A 103 TTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWG--MPLIAMMY-PRGKHIQNERDPELVAHAARLGAELG 179 (273)
T ss_dssp SCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHT--CCEEEEEE-ECSTTCSCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcC--CCEEEEeC-CCCcccCCCCCHhHHHHHHHHHHHcC
Confidence 45677888999998 332 122222 2344455554444 34454430 111 1344444222
Q ss_pred CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCc-ChHHHh-HHHHHHHhCccEEEeccc
Q 008319 331 SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTP-TRAEVS-DIAIAVREGADAVMLSGE 408 (570)
Q Consensus 331 sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~P-trAEv~-Dv~nav~~G~D~vmLs~E 408 (570)
+|.|.++++ .+ + ...+++ +...+.|++.. -...+ +..+.. .+..++..|+|+++....
T Consensus 180 ad~i~~~~~-----~~---~-~~l~~i---~~~~~ipvva~--------GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~ 239 (273)
T 2qjg_A 180 ADIVKTSYT-----GD---I-DSFRDV---VKGCPAPVVVA--------GGPKTNTDEEFLQMIKDAMEAGAAGVAVGRN 239 (273)
T ss_dssp CSEEEECCC-----SS---H-HHHHHH---HHHCSSCEEEE--------CCSCCSSHHHHHHHHHHHHHHTCSEEECCHH
T ss_pred CCEEEECCC-----CC---H-HHHHHH---HHhCCCCEEEE--------eCCCCCCHHHHHHHHHHHHHcCCcEEEeeHH
Confidence 798888741 12 1 222333 33457998864 22222 233322 266777899999998766
Q ss_pred ccCCCCHHHHHHHHHHHHHH
Q 008319 409 TAHGKFPLKAVKVMHTVALR 428 (570)
Q Consensus 409 TA~G~yP~eaV~~m~~I~~~ 428 (570)
-.....|.++++.+..++.+
T Consensus 240 i~~~~~~~~~~~~l~~~~~~ 259 (273)
T 2qjg_A 240 IFQHDDVVGITRAVCKIVHE 259 (273)
T ss_dssp HHTSSSHHHHHHHHHHHHHH
T ss_pred hhCCCCHHHHHHHHHHHHhc
Confidence 66677899999998888764
No 85
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=80.41 E-value=24 Score=32.65 Aligned_cols=130 Identities=9% Similarity=0.002 Sum_probs=69.9
Q ss_pred hhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEEcCC-CcccCCC-CCCH
Q 008319 274 KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARG-DLGAELP-IEDV 350 (570)
Q Consensus 274 ~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrG-DLg~eig-~~~v 350 (570)
+.+.+.|+|+|.++.-. .++..++++. ....+..-+.|++-+. +..+. +|.+++++. +=+..-+ ...-
T Consensus 80 ~~a~~~gad~v~l~~~~--~~~~~~~~~~----~~~~~~v~~~t~~e~~---~~~~~g~d~i~~~~~~~~~~~~~~~~~~ 150 (215)
T 1xi3_A 80 DVALAVDADGVQLGPED--MPIEVAKEIA----PNLIIGASVYSLEEAL---EAEKKGADYLGAGSVFPTKTKEDARVIG 150 (215)
T ss_dssp HHHHHHTCSEEEECTTS--CCHHHHHHHC----TTSEEEEEESSHHHHH---HHHHHTCSEEEEECSSCC----CCCCCH
T ss_pred HHHHHcCCCEEEECCcc--CCHHHHHHhC----CCCEEEEecCCHHHHH---HHHhcCCCEEEEcCCccCCCCCCCCCcC
Confidence 45667899999876322 1233444432 2344444455554332 22222 899998641 1000001 1111
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHH
Q 008319 351 PLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALR 428 (570)
Q Consensus 351 ~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~ 428 (570)
....+++ ++...+|++.+ -...|. ++..+...|+|++.+.+--...+.|.+.++.+.+.+++
T Consensus 151 ~~~l~~l---~~~~~~pvia~--------GGI~~~-----nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~~ 212 (215)
T 1xi3_A 151 LEGLRKI---VESVKIPVVAI--------GGINKD-----NAREVLKTGVDGIAVISAVMGAEDVRKATEELRKIVEE 212 (215)
T ss_dssp HHHHHHH---HHHCSSCEEEE--------SSCCTT-----THHHHHTTTCSEEEESHHHHTSSSHHHHHHHHHHHHHH
T ss_pred HHHHHHH---HHhCCCCEEEE--------CCcCHH-----HHHHHHHcCCCEEEEhHHHhCCCCHHHHHHHHHHHHhh
Confidence 2222233 23348898875 222222 45566778999999876544456788888887776654
No 86
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=80.00 E-value=7.7 Score=37.77 Aligned_cols=131 Identities=10% Similarity=0.062 Sum_probs=75.9
Q ss_pred CcEEEecCCCChhHHHHHHH---HHHhcCCCceEEEeecCcchhhhHHHHHH--hCCEEEEcCCCcccCCCCCCHHHHHH
Q 008319 281 VDFYAVSFVKDAKVVHELKD---YLKSCNADIHVIVKIESADSIPNLHSIIS--ASDGAMVARGDLGAELPIEDVPLLQE 355 (570)
Q Consensus 281 vd~I~~SfV~sa~dv~~vr~---~l~~~~~~i~IiaKIEt~~gv~NldeIl~--~sDgImIgrGDLg~eig~~~v~~~qk 355 (570)
+|++.+-.-.+.+++.+.-+ .+++.|..+.+-.+-.|+ ++.+++++. ..|.|.+..-+-|.. |..-.+...+
T Consensus 86 Ad~itvH~ea~~~~~~~~i~~~~~i~~~G~k~gvalnp~tp--~~~~~~~l~~g~~D~VlvmsV~pGf~-gq~f~~~~l~ 162 (227)
T 1tqx_A 86 SNQLTFHFEALNEDTERCIQLAKEIRDNNLWCGISIKPKTD--VQKLVPILDTNLINTVLVMTVEPGFG-GQSFMHDMMG 162 (227)
T ss_dssp SSEEEEEGGGGTTCHHHHHHHHHHHHTTTCEEEEEECTTSC--GGGGHHHHTTTCCSEEEEESSCTTCS-SCCCCGGGHH
T ss_pred CCEEEEeecCCccCHHHHHHHHHHHHHcCCeEEEEeCCCCc--HHHHHHHhhcCCcCEEEEeeeccCCC-CcccchHHHH
Confidence 89887664433325666656 777777766665555555 778999999 799998843222211 1111222222
Q ss_pred HHHHHHHHc-CCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHH
Q 008319 356 DIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVAL 427 (570)
Q Consensus 356 ~Ii~~c~~~-gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~ 427 (570)
+|-+..+.. +.++.+. -.-.+ ..+..++..|+|.+...+--.....|.++++.|++.+.
T Consensus 163 ki~~lr~~~~~~~I~Vd--------GGI~~-----~ti~~~~~aGAd~~V~GsaIf~~~d~~~~i~~l~~~~~ 222 (227)
T 1tqx_A 163 KVSFLRKKYKNLNIQVD--------GGLNI-----ETTEISASHGANIIVAGTSIFNAEDPKYVIDTMRVSVQ 222 (227)
T ss_dssp HHHHHHHHCTTCEEEEE--------SSCCH-----HHHHHHHHHTCCEEEESHHHHTCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCeEEEE--------CCCCH-----HHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHHH
Confidence 222222222 5555543 12222 24567788999999986433334469999999987554
No 87
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=79.42 E-value=51 Score=33.59 Aligned_cols=159 Identities=11% Similarity=0.078 Sum_probs=98.9
Q ss_pred CCChhhHHHhhhh-hhcCCcEEEec-CCCChhHHHHHHHHHHhcCCCceEEEee-cCcchhhhHHHHHHh--CC--EEEE
Q 008319 264 SITDKDWEDIKFG-VDNQVDFYAVS-FVKDAKVVHELKDYLKSCNADIHVIVKI-ESADSIPNLHSIISA--SD--GAMV 336 (570)
Q Consensus 264 ~lt~kD~~dI~~~-~~~gvd~I~~S-fV~sa~dv~~vr~~l~~~~~~i~IiaKI-Et~~gv~NldeIl~~--sD--gImI 336 (570)
.++..|+-.|... .+.|+|.|=+. ++.+++|...++...+. ..++.+.+-. =+.++++..-+-+.- .| .+++
T Consensus 24 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~r~~~~~i~~a~~al~~ag~~~v~i~~ 102 (325)
T 3eeg_A 24 QLNTEEKIIVAKALDELGVDVIEAGFPVSSPGDFNSVVEITKA-VTRPTICALTRAKEADINIAGEALRFAKRSRIHTGI 102 (325)
T ss_dssp -CCTTHHHHHHHHHHHHTCSEEEEECTTSCHHHHHHHHHHHHH-CCSSEEEEECCSCHHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCCCHhHHHHHHHHHHh-CCCCEEEEeecCCHHHHHHHHHhhcccCCCEEEEEe
Confidence 3456777666444 46899999665 45678888777665544 3555655543 233344432222221 34 3566
Q ss_pred cCCCccc----CCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHH-HhCccEEEecccccC
Q 008319 337 ARGDLGA----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAV-REGADAVMLSGETAH 411 (570)
Q Consensus 337 grGDLg~----eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav-~~G~D~vmLs~ETA~ 411 (570)
+--|+-. ....++.....+.+++.|++.|+.|.+..+ .++ .-+...+.+++..+ ..|+|.+.|. +|.=
T Consensus 103 s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~-d~~-----~~~~~~~~~~~~~~~~~G~~~i~l~-DT~G 175 (325)
T 3eeg_A 103 GSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCE-DAG-----RADQAFLARMVEAVIEAGADVVNIP-DTTG 175 (325)
T ss_dssp ECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEE-TGG-----GSCHHHHHHHHHHHHHHTCSEEECC-BSSS
T ss_pred cccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEcc-ccc-----cchHHHHHHHHHHHHhcCCCEEEec-CccC
Confidence 6566532 234567777778999999999999876422 111 12233355555544 5699998884 8887
Q ss_pred CCCHHHHHHHHHHHHHHhh
Q 008319 412 GKFPLKAVKVMHTVALRTE 430 (570)
Q Consensus 412 G~yP~eaV~~m~~I~~~aE 430 (570)
.-.|.++-+.+..+..+.-
T Consensus 176 ~~~P~~v~~lv~~l~~~~~ 194 (325)
T 3eeg_A 176 YMLPWQYGERIKYLMDNVS 194 (325)
T ss_dssp CCCHHHHHHHHHHHHHHCS
T ss_pred CcCHHHHHHHHHHHHHhCC
Confidence 7889999888888876654
No 88
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=79.24 E-value=33 Score=34.65 Aligned_cols=157 Identities=10% Similarity=0.111 Sum_probs=92.7
Q ss_pred CCChhhHHHhhhh-hhcCCcEEEec-CCCCh-----hHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEE
Q 008319 264 SITDKDWEDIKFG-VDNQVDFYAVS-FVKDA-----KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAM 335 (570)
Q Consensus 264 ~lt~kD~~dI~~~-~~~gvd~I~~S-fV~sa-----~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgIm 335 (570)
.++..|+..|... .+.|+|.|=+. |+... .|..++...+.+. .++.+.+-+.+. +.++..++. .|.|-
T Consensus 24 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~-~~~~~~~l~~~~---~~i~~a~~~g~~~v~ 99 (307)
T 1ydo_A 24 WIATEDKITWINQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDRE-KGVTYAALVPNQ---RGLENALEGGINEAC 99 (307)
T ss_dssp CCCHHHHHHHHHHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-TTCEEEEECCSH---HHHHHHHHHTCSEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCcCcccccccCCHHHHHHHhhhc-CCCeEEEEeCCH---HhHHHHHhCCcCEEE
Confidence 4577787666544 46899998665 44321 2443443444332 455665655443 344444444 67544
Q ss_pred --EcCCCc----ccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcC-C---CcChHHHhHHHH-HHHhCccEEE
Q 008319 336 --VARGDL----GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDH-P---TPTRAEVSDIAI-AVREGADAVM 404 (570)
Q Consensus 336 --IgrGDL----g~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~-~---~PtrAEv~Dv~n-av~~G~D~vm 404 (570)
++-.|+ -.....++.....+++++.++++|+.|-.. + +|... + .-+...+.+++. +...|+|.+.
T Consensus 100 i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~--i--~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~ 175 (307)
T 1ydo_A 100 VFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAY--L--STVFGCPYEKDVPIEQVIRLSEALFEFGISELS 175 (307)
T ss_dssp EEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEE--E--ECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEE
T ss_pred EEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEE--E--EEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 443343 112233556677789999999999998532 1 11111 1 223344555543 4678999999
Q ss_pred ecccccCCCCHHHHHHHHHHHHHHh
Q 008319 405 LSGETAHGKFPLKAVKVMHTVALRT 429 (570)
Q Consensus 405 Ls~ETA~G~yP~eaV~~m~~I~~~a 429 (570)
|. +|.=.-.|.++-+.+..+..+.
T Consensus 176 l~-DT~G~~~P~~v~~lv~~l~~~~ 199 (307)
T 1ydo_A 176 LG-DTIGAANPAQVETVLEALLARF 199 (307)
T ss_dssp EE-CSSCCCCHHHHHHHHHHHHTTS
T ss_pred Ec-CCCCCcCHHHHHHHHHHHHHhC
Confidence 96 7776778999988888886544
No 89
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=79.03 E-value=4.6 Score=42.84 Aligned_cols=154 Identities=20% Similarity=0.261 Sum_probs=98.9
Q ss_pred HHHhhhhhhcCCcEEEecCCCChhHHHHH---HHHHHhcCCCceEEEeec--CcchhhhHHHHHHhCCEEEEcCCCcccC
Q 008319 270 WEDIKFGVDNQVDFYAVSFVKDAKVVHEL---KDYLKSCNADIHVIVKIE--SADSIPNLHSIISASDGAMVARGDLGAE 344 (570)
Q Consensus 270 ~~dI~~~~~~gvd~I~~SfV~sa~dv~~v---r~~l~~~~~~i~IiaKIE--t~~gv~NldeIl~~sDgImIgrGDLg~e 344 (570)
.+.|..-.+.|.|.|-++ |.+.++...+ ++-|...+.+++++|-|= -+.++..++...+..|.+=|-||.+|-.
T Consensus 41 v~QI~~L~~aG~eiVRva-Vp~~~~A~al~~I~~~l~~~~~~vPLVADiHF~~~~al~a~~~~a~~~dkiRINPGNig~~ 119 (406)
T 4g9p_A 41 TAQVLELHRAGSEIVRLT-VNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGRG 119 (406)
T ss_dssp HHHHHHHHHHTCSEEEEE-CCSHHHHHHHHHHHHHHHHTTCCCCEEEECCSSHHHHHHHCHHHHHHCSEEEECTTSSCST
T ss_pred HHHHHHHHHcCCCEEEEe-cCCHHHHHhHHHHHHHHHhcCCCCceEeeecccHHHHHHHHHHHHhHHhhcccCccccCcc
Confidence 345555568899999887 6777776655 455666788999999883 3457777788888899999999987631
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCEEEEcc-------chhhhh----cCCCcChH-----H--Hh----HHHHHHHhCc--
Q 008319 345 LPIEDVPLLQEDIIRRCRSMQKPVIVATN-------MLESMI----DHPTPTRA-----E--VS----DIAIAVREGA-- 400 (570)
Q Consensus 345 ig~~~v~~~qk~Ii~~c~~~gKPvivaTq-------mLeSM~----~~~~PtrA-----E--v~----Dv~nav~~G~-- 400 (570)
.+...--+.++++|+++|+|+=+-.+ +|+.+. ..|.|.-+ | +. .+.-+...|+
T Consensus 120 ---~k~~e~~~~vv~~ak~~~~pIRIGVN~GSL~~~ll~k~~d~~~~~~~p~~~~~v~~eamVeSAl~~~~~~~~~~f~~ 196 (406)
T 4g9p_A 120 ---RHKDEHFAEMIRIAMDLGKPVRIGANWGSLDPALLTELMDRNASRPEPKSAHEVVLEALVESAVRAYEAALEMGLGE 196 (406)
T ss_dssp ---HHHHHHHHHHHHHHHHHTCCEEEEEEGGGCCHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHHHHHHTCCG
T ss_pred ---ccHHHHHHHHHHHHHHccCCceeccccccccHHHHHHhhcccccCCCccchhhhHHHHHHHHHHHHHHHHHHcCCCh
Confidence 12334456899999999999754432 333332 34555322 2 11 1122223455
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHHHhh
Q 008319 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (570)
Q Consensus 401 D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE 430 (570)
|=+++|--. ..+...|+.-+.+..+.+
T Consensus 197 ~~iviS~Ka---Sdv~~~i~aYr~la~~~d 223 (406)
T 4g9p_A 197 DKLVLSAKV---SKARDLVWVYRELARRTQ 223 (406)
T ss_dssp GGEEEEEEC---SSHHHHHHHHHHHHHHCC
T ss_pred hheEEEeec---CCHHHHHHHHHHHHHhCC
Confidence 557887443 357777777777765543
No 90
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=78.87 E-value=19 Score=35.99 Aligned_cols=161 Identities=12% Similarity=0.090 Sum_probs=91.5
Q ss_pred CCChhhHHHh-hhhhhcCCcEEEec-CCCC---h--hHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEE
Q 008319 264 SITDKDWEDI-KFGVDNQVDFYAVS-FVKD---A--KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAM 335 (570)
Q Consensus 264 ~lt~kD~~dI-~~~~~~gvd~I~~S-fV~s---a--~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgIm 335 (570)
.++..|+..| +...+.|+|.|-+. |+.. + .|..++...+.+. .++.+.+.+.+ .+.++..++. +|.|.
T Consensus 23 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~-~~~~~~~l~~~---~~~i~~a~~ag~~~v~ 98 (298)
T 2cw6_A 23 IVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKF-PGINYPVLTPN---LKGFEAAVAAGAKEVV 98 (298)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCCC-TTCBCCEECCS---HHHHHHHHHTTCSEEE
T ss_pred CCCHHHHHHHHHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhhC-CCCEEEEEcCC---HHhHHHHHHCCCCEEE
Confidence 3677777555 44457899998665 3332 1 3444454445432 23343343433 3344444444 67554
Q ss_pred E--cCCCcc----cCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHH-HHHHhCccEEEeccc
Q 008319 336 V--ARGDLG----AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIA-IAVREGADAVMLSGE 408 (570)
Q Consensus 336 I--grGDLg----~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~-nav~~G~D~vmLs~E 408 (570)
| +-.|.- .....++.....+++++.++++|++|-+..-+-=+-.....-+..++.+++ .+...|+|.+.|. +
T Consensus 99 i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~-D 177 (298)
T 2cw6_A 99 IFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLG-D 177 (298)
T ss_dssp EEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEEEEE-E
T ss_pred EEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEec-C
Confidence 4 322220 122335566677789999999999986431110000011112334455544 4567899999997 6
Q ss_pred ccCCCCHHHHHHHHHHHHHHh
Q 008319 409 TAHGKFPLKAVKVMHTVALRT 429 (570)
Q Consensus 409 TA~G~yP~eaV~~m~~I~~~a 429 (570)
|.=.-.|.+.-+.+..+..+.
T Consensus 178 T~G~~~P~~~~~lv~~l~~~~ 198 (298)
T 2cw6_A 178 TIGVGTPGIMKDMLSAVMQEV 198 (298)
T ss_dssp TTSCCCHHHHHHHHHHHHHHS
T ss_pred CCCCcCHHHHHHHHHHHHHhC
Confidence 766678999999988887765
No 91
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=78.70 E-value=5.9 Score=38.93 Aligned_cols=101 Identities=11% Similarity=0.169 Sum_probs=57.2
Q ss_pred hhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEEcCCCcccCCCCCCHHH
Q 008319 274 KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPL 352 (570)
Q Consensus 274 ~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrGDLg~eig~~~v~~ 352 (570)
+..++.|++.|-+.+ +++.....++..-++. .++.+-+ -|.--.+..+..+++ +|.|+. |+
T Consensus 53 ~al~~gGi~~iEvt~-~t~~a~e~I~~l~~~~-~~~~iGa--GTVlt~~~a~~Ai~AGA~fIvs-P~------------- 114 (232)
T 4e38_A 53 KVLAENGLPAAEITF-RSDAAVEAIRLLRQAQ-PEMLIGA--GTILNGEQALAAKEAGATFVVS-PG------------- 114 (232)
T ss_dssp HHHHHTTCCEEEEET-TSTTHHHHHHHHHHHC-TTCEEEE--ECCCSHHHHHHHHHHTCSEEEC-SS-------------
T ss_pred HHHHHCCCCEEEEeC-CCCCHHHHHHHHHHhC-CCCEEeE--CCcCCHHHHHHHHHcCCCEEEe-CC-------------
Confidence 344567777777765 3444333333322222 2333322 233334455555555 666652 22
Q ss_pred HHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 353 LQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 353 ~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
.-..+++.|+++|.|++-- -.-.+++..|...|+|.+-+-
T Consensus 115 ~~~~vi~~~~~~gi~~ipG--------------v~TptEi~~A~~~Gad~vK~F 154 (232)
T 4e38_A 115 FNPNTVRACQEIGIDIVPG--------------VNNPSTVEAALEMGLTTLKFF 154 (232)
T ss_dssp CCHHHHHHHHHHTCEEECE--------------ECSHHHHHHHHHTTCCEEEEC
T ss_pred CCHHHHHHHHHcCCCEEcC--------------CCCHHHHHHHHHcCCCEEEEC
Confidence 1247888899999998621 112345788999999999883
No 92
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=77.68 E-value=20 Score=37.28 Aligned_cols=96 Identities=17% Similarity=0.268 Sum_probs=64.7
Q ss_pred hhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEE
Q 008319 292 AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 370 (570)
Q Consensus 292 a~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPviv 370 (570)
.+....+++|.++. .+.+++-+=. .+.+|.+.+. +|.+=||-+|+. +++ +++.+.+.|||||+
T Consensus 77 ~e~~~~L~~~~~~~--Gi~~~st~fD---~~svd~l~~~~v~~~KI~S~~~~------N~p-----LL~~va~~gKPviL 140 (350)
T 3g8r_A 77 PEQMQKLVAEMKAN--GFKAICTPFD---EESVDLIEAHGIEIIKIASCSFT------DWP-----LLERIARSDKPVVA 140 (350)
T ss_dssp HHHHHHHHHHHHHT--TCEEEEEECS---HHHHHHHHHTTCCEEEECSSSTT------CHH-----HHHHHHTSCSCEEE
T ss_pred HHHHHHHHHHHHHc--CCcEEeccCC---HHHHHHHHHcCCCEEEECccccc------CHH-----HHHHHHhhCCcEEE
Confidence 35566667766654 3556664333 3344555556 899999988873 333 45566689999999
Q ss_pred EccchhhhhcCCCcChHHHhHHHHHHHh-CccEEEecccccCCCCH
Q 008319 371 ATNMLESMIDHPTPTRAEVSDIAIAVRE-GADAVMLSGETAHGKFP 415 (570)
Q Consensus 371 aTqmLeSM~~~~~PtrAEv~Dv~nav~~-G~D~vmLs~ETA~G~yP 415 (570)
.|-| -|..|+...++++.. |.+.++|--++. ||
T Consensus 141 stGm---------stl~Ei~~Ave~i~~~g~~viLlhC~s~---YP 174 (350)
T 3g8r_A 141 STAG---------ARREDIDKVVSFMLHRGKDLTIMHCVAE---YP 174 (350)
T ss_dssp ECTT---------CCHHHHHHHHHHHHTTTCCEEEEECCCC---SS
T ss_pred ECCC---------CCHHHHHHHHHHHHHcCCCEEEEecCCC---CC
Confidence 8764 367899888888875 678777766653 66
No 93
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=77.33 E-value=34 Score=32.83 Aligned_cols=144 Identities=14% Similarity=0.158 Sum_probs=79.5
Q ss_pred CCCChhhHHHh-hhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHH-------HHHh-CCE
Q 008319 263 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHS-------IISA-SDG 333 (570)
Q Consensus 263 p~lt~kD~~dI-~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~Nlde-------Il~~-sDg 333 (570)
|..|+.|.+.+ +.+.++|++.|+++ +..+...++.+. .+++.+-++.|.|....+. .++. +|+
T Consensus 15 p~~t~~~i~~l~~~a~~~g~~~v~v~----~~~v~~~~~~l~----~v~v~~v~~~P~g~~~~~~k~~~~~~A~~~Gad~ 86 (225)
T 1mzh_A 15 PHLSEKEIEEFVLKSEELGIYAVCVN----PYHVKLASSIAK----KVKVCCVIGFPLGLNKTSVKVKEAVEAVRDGAQE 86 (225)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEC----GGGHHHHHHHCS----SSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCeEEEEC----HHHHHHHHHHhc----CCceeeEecCCCCccchhhhHHHHHHHHHcCCCE
Confidence 66788887655 55678999998754 445665566553 5778888887777654432 2222 666
Q ss_pred EEEcCCCcccCCCC---CCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHH-HHhCccEEEecccc
Q 008319 334 AMVARGDLGAELPI---EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIA-VREGADAVMLSGET 409 (570)
Q Consensus 334 ImIgrGDLg~eig~---~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~na-v~~G~D~vmLs~ET 409 (570)
|=+ -+.++- .+...+. +.+++.+++..|+++-- ++|+ +.-+..|+..++.. ...|+|++..+.--
T Consensus 87 Id~-----viN~g~~~~~~~~~~~-~~i~~v~~a~~pv~vKv-i~e~----~~l~~~~~~~~a~~a~eaGad~I~tstg~ 155 (225)
T 1mzh_A 87 LDI-----VWNLSAFKSEKYDFVV-EELKEIFRETPSAVHKV-IVET----PYLNEEEIKKAVEICIEAGADFIKTSTGF 155 (225)
T ss_dssp EEE-----ECCHHHHHTTCHHHHH-HHHHHHHHTCTTSEEEE-ECCG----GGCCHHHHHHHHHHHHHHTCSEEECCCSC
T ss_pred EEE-----EecHHHHhcCChHHHH-HHHHHHHHHhcCceEEE-EEeC----CCCCHHHHHHHHHHHHHhCCCEEEECCCC
Confidence 642 111111 1223333 33666666544876531 2332 33455566665544 55699999443211
Q ss_pred cCCCCHHHHHHHHHHH
Q 008319 410 AHGKFPLKAVKVMHTV 425 (570)
Q Consensus 410 A~G~yP~eaV~~m~~I 425 (570)
..|.+-.+.++.|.+.
T Consensus 156 ~~gga~~~~i~~v~~~ 171 (225)
T 1mzh_A 156 APRGTTLEEVRLIKSS 171 (225)
T ss_dssp SSSCCCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHH
Confidence 1234455667666543
No 94
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=77.03 E-value=21 Score=34.97 Aligned_cols=141 Identities=16% Similarity=0.109 Sum_probs=86.5
Q ss_pred CCCChhhHHHh-hhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhh-------HHHHHHh-CCE
Q 008319 263 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPN-------LHSIISA-SDG 333 (570)
Q Consensus 263 p~lt~kD~~dI-~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~N-------ldeIl~~-sDg 333 (570)
|.-|..|.+.+ ..+.++|++.|+++ +..+ ..++++.... .+++.+-|=-|.|-.+ .++-++. +|.
T Consensus 31 p~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v-~a~~~l~~~~-~v~v~tvigFP~G~~~~~~k~~e~~~Av~~GAdE 104 (234)
T 1n7k_A 31 PRATEEDVRNLVREASDYGFRCAVLT----PVYT-VKISGLAEKL-GVKLCSVIGFPLGQAPLEVKLVEAQTVLEAGATE 104 (234)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----HHHH-HHHHHHHHHH-TCCEEEEESTTTCCSCHHHHHHHHHHHHHHTCCE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEc----hHHh-eeehHhCCCC-CceEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 56677776444 67888999999876 5566 6677775431 4666666633343222 2333333 665
Q ss_pred EEE--cCCCcccCCCCCCHHHHHHHHHHHHHHcCCCE--EEEccchhhhhcCCCcChHHHhHHH-HHHHhCccEEEeccc
Q 008319 334 AMV--ARGDLGAELPIEDVPLLQEDIIRRCRSMQKPV--IVATNMLESMIDHPTPTRAEVSDIA-IAVREGADAVMLSGE 408 (570)
Q Consensus 334 ImI--grGDLg~eig~~~v~~~qk~Ii~~c~~~gKPv--ivaTqmLeSM~~~~~PtrAEv~Dv~-nav~~G~D~vmLs~E 408 (570)
|=+ ..|.|- +.+..-.+.+.+.|...|+|+ |+.|-. ++..|+.... -+...|+|.|=-|
T Consensus 105 ID~vinig~~~-----~~v~~ei~~v~~a~~~~g~~lKvIlEt~~---------L~~e~i~~a~ria~eaGADfVKTs-- 168 (234)
T 1n7k_A 105 LDVVPHLSLGP-----EAVYREVSGIVKLAKSYGAVVKVILEAPL---------WDDKTLSLLVDSSRRAGADIVKTS-- 168 (234)
T ss_dssp EEECCCGGGCH-----HHHHHHHHHHHHHHHHTTCEEEEECCGGG---------SCHHHHHHHHHHHHHTTCSEEESC--
T ss_pred EEEeccchHHH-----HHHHHHHHHHHHHHhhcCCeEEEEEeccC---------CCHHHHHHHHHHHHHhCCCEEEeC--
Confidence 533 223221 155566678888898888997 554332 3555655543 3567899998654
Q ss_pred ccCCCCH-----HHHHHH--HHHHHH
Q 008319 409 TAHGKFP-----LKAVKV--MHTVAL 427 (570)
Q Consensus 409 TA~G~yP-----~eaV~~--m~~I~~ 427 (570)
.|..| ++.|+. |++++.
T Consensus 169 --TG~~~~~gAt~~dv~l~~m~~~v~ 192 (234)
T 1n7k_A 169 --TGVYTKGGDPVTVFRLASLAKPLG 192 (234)
T ss_dssp --CSSSCCCCSHHHHHHHHHHHGGGT
T ss_pred --CCCCCCCCCCHHHHHHHHHHHHHC
Confidence 56555 788998 887654
No 95
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=76.69 E-value=7.9 Score=38.69 Aligned_cols=136 Identities=16% Similarity=0.252 Sum_probs=71.2
Q ss_pred hHHHhhhhhhcCCcEE--EecC---CCChhHHHHHH-----------------HHHHhcCCCceEEEeec-Cc---chhh
Q 008319 269 DWEDIKFGVDNQVDFY--AVSF---VKDAKVVHELK-----------------DYLKSCNADIHVIVKIE-SA---DSIP 322 (570)
Q Consensus 269 D~~dI~~~~~~gvd~I--~~Sf---V~sa~dv~~vr-----------------~~l~~~~~~i~IiaKIE-t~---~gv~ 322 (570)
-.+.++...+.|+|+| .+|| +-+..-|++.- +.+++.+.+++++.+.. ++ -|++
T Consensus 34 ~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e 113 (267)
T 3vnd_A 34 SLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGID 113 (267)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHH
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHH
Confidence 3455555567899985 6777 33333343321 12233335677888754 43 3556
Q ss_pred hH-HHHHHh-CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCc
Q 008319 323 NL-HSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGA 400 (570)
Q Consensus 323 Nl-deIl~~-sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~ 400 (570)
++ ++..++ +||+++. ||.. ++ ..+.+..|+++|...+.. -+|..+.. .+......+.
T Consensus 114 ~f~~~~~~aGvdgvii~--Dlp~----ee----~~~~~~~~~~~gl~~i~l--------iaP~t~~e---ri~~i~~~~~ 172 (267)
T 3vnd_A 114 EFYTKAQAAGVDSVLIA--DVPV----EE----SAPFSKAAKAHGIAPIFI--------APPNADAD---TLKMVSEQGE 172 (267)
T ss_dssp HHHHHHHHHTCCEEEET--TSCG----GG----CHHHHHHHHHTTCEEECE--------ECTTCCHH---HHHHHHHHCC
T ss_pred HHHHHHHHcCCCEEEeC--CCCH----hh----HHHHHHHHHHcCCeEEEE--------ECCCCCHH---HHHHHHHhCC
Confidence 55 444444 9999994 5544 43 467889999999876632 23333322 3334444455
Q ss_pred cEEEe---cccccCC-CCHHHHHHHHHHH
Q 008319 401 DAVML---SGETAHG-KFPLKAVKVMHTV 425 (570)
Q Consensus 401 D~vmL---s~ETA~G-~yP~eaV~~m~~I 425 (570)
+.+.+ .+=|-.- .+|.+..+.++++
T Consensus 173 gfvY~vS~~GvTG~~~~~~~~~~~~v~~v 201 (267)
T 3vnd_A 173 GYTYLLSRAGVTGTESKAGEPIENILTQL 201 (267)
T ss_dssp SCEEESCCCCCC--------CHHHHHHHH
T ss_pred CcEEEEecCCCCCCccCCcHHHHHHHHHH
Confidence 55554 3223222 2454445555554
No 96
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=76.61 E-value=51 Score=31.38 Aligned_cols=120 Identities=16% Similarity=0.133 Sum_probs=68.3
Q ss_pred HHHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHhCCE-EEE-c-CCCcccCCC
Q 008319 270 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDG-AMV-A-RGDLGAELP 346 (570)
Q Consensus 270 ~~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDg-ImI-g-rGDLg~eig 346 (570)
.+.++.+.+.|+|+|.++.. ..++...+.+++++.|.+ ++.-+......+.+..+...+|+ +.+ . +|-.|..-+
T Consensus 98 ~~~~~~~~~~Gad~v~~~~~-~~~~~~~~~~~~~~~g~~--~~~~i~~~t~~e~~~~~~~~~d~~i~~~~~~G~~g~~~~ 174 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVVDL-PVFHAKEFTEIAREEGIK--TVFLAAPNTPDERLKVIDDMTTGFVYLVSLYGTTGAREE 174 (248)
T ss_dssp HHHHHHHHHHTCCEEEETTC-CGGGHHHHHHHHHHHTCE--EEEEECTTCCHHHHHHHHHHCSSEEEEECCC-------C
T ss_pred HHHHHHHHHCCCCEEEECCC-ChhhHHHHHHHHHHhCCC--eEEEECCCCHHHHHHHHHhcCCCeEEEEECCccCCCCCC
Confidence 35677778899999999854 456777777778776654 34444433445667777777884 323 2 222222111
Q ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 347 IEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 347 ~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
. -+...+.+-+.....+.|+++. ...-+ ..++..+...|+|++.+.
T Consensus 175 ~--~~~~~~~i~~l~~~~~~pi~~~---------GGI~~---~e~i~~~~~~Gad~vivG 220 (248)
T 1geq_A 175 I--PKTAYDLLRRAKRICRNKVAVG---------FGVSK---REHVVSLLKEGANGVVVG 220 (248)
T ss_dssp C--CHHHHHHHHHHHHHCSSCEEEE---------SCCCS---HHHHHHHHHTTCSEEEEC
T ss_pred C--ChhHHHHHHHHHhhcCCCEEEE---------eecCC---HHHHHHHHHcCCCEEEEc
Confidence 1 1222333333334447898864 23322 235666678899999875
No 97
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=76.24 E-value=20 Score=37.77 Aligned_cols=112 Identities=13% Similarity=0.153 Sum_probs=76.9
Q ss_pred HHhhhhhhcCCcEEEecCCC-----------ChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHhCCEEEEcCC
Q 008319 271 EDIKFGVDNQVDFYAVSFVK-----------DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARG 339 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~-----------sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDgImIgrG 339 (570)
+-++.+.+.|+|+|....-. ..+.+..++++.++. .+.+++-+-.++.++-+. +.+|.+-||.+
T Consensus 160 ~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~--Gl~~~te~~d~~~~~~l~---~~vd~lkIgs~ 234 (385)
T 3nvt_A 160 AVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEY--GLGVISEIVTPADIEVAL---DYVDVIQIGAR 234 (385)
T ss_dssp HHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECCSGGGHHHHT---TTCSEEEECGG
T ss_pred HHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHc--CCEEEEecCCHHHHHHHH---hhCCEEEECcc
Confidence 44455667899988544211 245666777777654 578888887777665554 45999999987
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHh-CccEEEec
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE-GADAVMLS 406 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~-G~D~vmLs 406 (570)
++.. -.+++.+.+.||||++.|.| ..|..|+...+..+.. |.+-++|.
T Consensus 235 ~~~n-----------~~LL~~~a~~gkPVilk~G~--------~~t~~e~~~Ave~i~~~Gn~~i~L~ 283 (385)
T 3nvt_A 235 NMQN-----------FELLKAAGRVDKPILLKRGL--------SATIEEFIGAAEYIMSQGNGKIILC 283 (385)
T ss_dssp GTTC-----------HHHHHHHHTSSSCEEEECCT--------TCCHHHHHHHHHHHHTTTCCCEEEE
T ss_pred cccC-----------HHHHHHHHccCCcEEEecCC--------CCCHHHHHHHHHHHHHcCCCeEEEE
Confidence 7643 25677788899999986543 2667888888888764 66555554
No 98
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=76.16 E-value=17 Score=34.45 Aligned_cols=137 Identities=11% Similarity=0.071 Sum_probs=76.1
Q ss_pred hhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceE-EE-eecCcchhhhHHHHHHhCCEEEEcCCCcccCCCCCCHHH
Q 008319 275 FGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHV-IV-KIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPL 352 (570)
Q Consensus 275 ~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~I-ia-KIEt~~gv~NldeIl~~sDgImIgrGDLg~eig~~~v~~ 352 (570)
.+.+.|+|+|.+..--..+.+..+.+++++.|....+ +. -+ |....+.++++ . .+-+++.++-++.+.|+...+.
T Consensus 75 ~~~~~Gad~itvh~~~g~~~l~~~~~~~~~~g~~~~~~ll~~~-t~~~~~~l~~~-~-~~~~vl~~a~~~~~~G~~g~~~ 151 (216)
T 1q6o_A 75 MCFEANADWVTVICCADINTAKGALDVAKEFNGDVQIELTGYW-TWEQAQQWRDA-G-IGQVVYHRSRDAQAAGVAWGEA 151 (216)
T ss_dssp HHHHTTCSEEEEETTSCHHHHHHHHHHHHHTTCEEEEEECSCC-CHHHHHHHHHT-T-CCEEEEECCHHHHHTTCCCCHH
T ss_pred HHHhCCCCEEEEeccCCHHHHHHHHHHHHHcCCCceeeeeeCC-ChhhHHHHHhc-C-cHHHHHHHHHHHHhcCCCCCHH
Confidence 4557899999887554544477777777776554322 11 11 12233444443 1 4555555555555666543122
Q ss_pred HHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHH
Q 008319 353 LQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALR 428 (570)
Q Consensus 353 ~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~ 428 (570)
-.+.+-+.+ ..+.|+++. -...|.. +..++..|+|.+....--....-|.++++.+.+.+.+
T Consensus 152 ~i~~lr~~~-~~~~~i~v~--------GGI~~~~-----~~~~~~aGad~ivvG~~I~~a~dp~~~~~~~~~~i~~ 213 (216)
T 1q6o_A 152 DITAIKRLS-DMGFKVTVT--------GGLALED-----LPLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSIAE 213 (216)
T ss_dssp HHHHHHHHH-HTTCEEEEE--------SSCCGGG-----GGGGTTSCCSEEEESHHHHTSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhc-CCCCcEEEE--------CCcChhh-----HHHHHHcCCCEEEEeehhcCCCCHHHHHHHHHHHHHh
Confidence 223333333 335556653 2223322 3456788999998864433445699999988876543
No 99
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=75.82 E-value=62 Score=33.02 Aligned_cols=150 Identities=12% Similarity=0.028 Sum_probs=89.9
Q ss_pred CCChhhHHHhhhh-hhcCCcEEEe-----cCCCC-------hhHHHHHHHHHHhcCCCceEEEee-cCcchhhhHHHHHH
Q 008319 264 SITDKDWEDIKFG-VDNQVDFYAV-----SFVKD-------AKVVHELKDYLKSCNADIHVIVKI-ESADSIPNLHSIIS 329 (570)
Q Consensus 264 ~lt~kD~~dI~~~-~~~gvd~I~~-----SfV~s-------a~dv~~vr~~l~~~~~~i~IiaKI-Et~~gv~NldeIl~ 329 (570)
.++..|+..|..+ .+.|+|.|=+ ++..+ +.+...++...+ ...++++.+.. =+..-.+.++...+
T Consensus 26 ~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~-~~~~~~i~~l~~p~~~~~~~i~~a~~ 104 (345)
T 1nvm_A 26 QYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAG-EISHAQIATLLLPGIGSVHDLKNAYQ 104 (345)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHT-TCSSSEEEEEECBTTBCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHh-hCCCCEEEEEecCCcccHHHHHHHHh
Confidence 4567777666444 4689999988 33322 334445555443 33566776663 11111334555554
Q ss_pred h-CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHH-HHHhCccEEEecc
Q 008319 330 A-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSG 407 (570)
Q Consensus 330 ~-sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vmLs~ 407 (570)
. +|++.|. + +..++ ...+..++.|+++|+.+... + ++. +.-+...+.+++. +...|+|.+-|.+
T Consensus 105 aGvd~v~I~---~----~~s~~-~~~~~~i~~ak~~G~~v~~~---~-~~a--~~~~~e~~~~ia~~~~~~Ga~~i~l~D 170 (345)
T 1nvm_A 105 AGARVVRVA---T----HCTEA-DVSKQHIEYARNLGMDTVGF---L-MMS--HMIPAEKLAEQGKLMESYGATCIYMAD 170 (345)
T ss_dssp HTCCEEEEE---E----ETTCG-GGGHHHHHHHHHHTCEEEEE---E-EST--TSSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCcCEEEEE---E----eccHH-HHHHHHHHHHHHCCCEEEEE---E-EeC--CCCCHHHHHHHHHHHHHCCCCEEEECC
Confidence 4 8988774 2 22222 23567888999999998765 1 112 2223334555544 4556899999975
Q ss_pred cccCCCCHHHHHHHHHHHHHHh
Q 008319 408 ETAHGKFPLKAVKVMHTVALRT 429 (570)
Q Consensus 408 ETA~G~yP~eaV~~m~~I~~~a 429 (570)
=|-.. .|-++-+.+..+....
T Consensus 171 T~G~~-~P~~v~~lv~~l~~~~ 191 (345)
T 1nvm_A 171 SGGAM-SMNDIRDRMRAFKAVL 191 (345)
T ss_dssp TTCCC-CHHHHHHHHHHHHHHS
T ss_pred CcCcc-CHHHHHHHHHHHHHhc
Confidence 54454 5999888888887766
No 100
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=75.19 E-value=25 Score=33.94 Aligned_cols=129 Identities=10% Similarity=0.037 Sum_probs=69.7
Q ss_pred hhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHH----HHHHh-----CCEEEEcCCCcccC
Q 008319 274 KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLH----SIISA-----SDGAMVARGDLGAE 344 (570)
Q Consensus 274 ~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~Nld----eIl~~-----sDgImIgrGDLg~e 344 (570)
+...+.|+|+|.+.-.-..+-+..+.+++++.+..+.+++..-++.+.+.++ .+++. .||++.+.
T Consensus 85 ~~~~~~gad~vtvh~~~G~~~l~~~~~~~~~~g~~v~vLt~~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~~a------ 158 (228)
T 3m47_A 85 RATFKAGADAIIVHGFPGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPS------ 158 (228)
T ss_dssp HHHHHTTCSEEEEESTTCHHHHHHHHHHHHHHTCEEEEECCCCSGGGGTTHHHHHHHHHHHHHHTTCCEEECCS------
T ss_pred HHHHhCCCCEEEEeccCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHHHHHHHHHHHHHHHhCCcEEEECC------
Confidence 3445789999988644445557777788877676666666776665433322 22222 57766542
Q ss_pred CCCCCHHHHHHHHHHHHHHcCC-CEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHH
Q 008319 345 LPIEDVPLLQEDIIRRCRSMQK-PVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 423 (570)
Q Consensus 345 ig~~~v~~~qk~Ii~~c~~~gK-PvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~ 423 (570)
.+ +..-+.|-+. .|. ..++. + .- +++-.+. .++..|+|.+....--.....|.++++.+.
T Consensus 159 ---t~-~~e~~~ir~~---~~~~~~iv~-P-------GI---~~~g~~p-~~~~aGad~iVvGr~I~~a~dp~~a~~~~~ 219 (228)
T 3m47_A 159 ---TR-PERLSRLREI---IGQDSFLIS-P-------GV---GAQGGDP-GETLRFADAIIVGRSIYLADNPAAAAAGAI 219 (228)
T ss_dssp ---SC-HHHHHHHHHH---HCSSSEEEE-C-------C-------------CGGGTCSEEEECHHHHTSSCHHHHHHHHH
T ss_pred ---CC-hHHHHHHHHh---cCCCCEEEe-c-------Cc---CcCCCCH-hHHHcCCCEEEECHHHhCCCCHHHHHHHHH
Confidence 11 1111222222 343 22331 1 11 2233345 778899999888755556678999988877
Q ss_pred HHHH
Q 008319 424 TVAL 427 (570)
Q Consensus 424 ~I~~ 427 (570)
+.++
T Consensus 220 ~~~~ 223 (228)
T 3m47_A 220 ESIK 223 (228)
T ss_dssp HHC-
T ss_pred HHHH
Confidence 6553
No 101
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=74.85 E-value=4 Score=39.94 Aligned_cols=150 Identities=13% Similarity=0.047 Sum_probs=86.8
Q ss_pred CCCChhhHHHh-hhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhh-------hHHHHHHh-CCE
Q 008319 263 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIP-------NLHSIISA-SDG 333 (570)
Q Consensus 263 p~lt~kD~~dI-~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~-------NldeIl~~-sDg 333 (570)
|..|+.|.+.+ +.+.++|++.|+++ +..+...+++|+ + +++.+-|=-|.|-. ..++ ++. +|.
T Consensus 12 p~~t~~~i~~l~~~A~~~~~~aVcv~----p~~v~~a~~~l~--g--v~v~tvigFP~G~~~~~~k~~E~~~-i~~GAdE 82 (226)
T 1vcv_A 12 PYLTVDEAVAGARKAEELGVAAYCVN----PIYAPVVRPLLR--K--VKLCVVADFPFGALPTASRIALVSR-LAEVADE 82 (226)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHGGGCS--S--SEEEEEESTTTCCSCHHHHHHHHHH-HTTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEC----HHHHHHHHHHhC--C--CeEEEEeCCCCCCCchHHHHHHHHH-HHCCCCE
Confidence 56678887544 67888999999876 555666666663 2 77777664444333 3344 443 554
Q ss_pred EEE--cCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHH-HHHHhCccEEEeccccc
Q 008319 334 AMV--ARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIA-IAVREGADAVMLSGETA 410 (570)
Q Consensus 334 ImI--grGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~-nav~~G~D~vmLs~ETA 410 (570)
|-+ ..|-|- +=.++.+..-.+.+.+.|...+.+||+.|-.| |..|+.... -+...|+|.|=-|.-=.
T Consensus 83 ID~Vinig~~~-~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~L---------t~eei~~a~~ia~eaGADfVKTSTGf~ 152 (226)
T 1vcv_A 83 IDVVAPIGLVK-SRRWAEVRRDLISVVGAAGGRVVKVITEEPYL---------RDEERYTLYDIIAEAGAHFIKSSTGFA 152 (226)
T ss_dssp EEEECCHHHHH-TTCHHHHHHHHHHHHHHTTTSEEEEECCGGGC---------CHHHHHHHHHHHHHHTCSEEECCCSCC
T ss_pred EEEecchhhhc-CCCHHHHHHHHHHHHHHHcCCCceEEEeccCC---------CHHHHHHHHHHHHHcCCCEEEeCCCCC
Confidence 422 111110 00112344444566666655566788765544 555655443 35678999987651111
Q ss_pred ----------CCCCHHHHHHHHHHHHHHhhc
Q 008319 411 ----------HGKFPLKAVKVMHTVALRTES 431 (570)
Q Consensus 411 ----------~G~yP~eaV~~m~~I~~~aE~ 431 (570)
-|.--++.|+.|++.++++..
T Consensus 153 ~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~ 183 (226)
T 1vcv_A 153 EEAYAARQGNPVHSTPERAAAIARYIKEKGY 183 (226)
T ss_dssp CHHHHHHTTCCSSCCHHHHHHHHHHHHHHTC
T ss_pred ccccccccCCCCCCCHHHHHHHHHHHHHhCC
Confidence 122346899999999877653
No 102
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=74.34 E-value=32 Score=32.20 Aligned_cols=127 Identities=13% Similarity=0.106 Sum_probs=68.5
Q ss_pred hhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEEcCC---Cc----ccCC
Q 008319 274 KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARG---DL----GAEL 345 (570)
Q Consensus 274 ~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrG---DL----g~ei 345 (570)
+.+.+.|+|+|.++... .++.++++.+ +. ..+-.-..|.+- +.+..+. +|.+.+++- .- +...
T Consensus 88 ~~a~~~gad~v~l~~~~--~~~~~~~~~~---g~-~~~~~s~~t~~e---~~~a~~~g~d~v~~~~v~~t~~~~~~~~~~ 158 (227)
T 2tps_A 88 ELALNLKADGIHIGQED--ANAKEVRAAI---GD-MILGVSAHTMSE---VKQAEEDGADYVGLGPIYPTETKKDTRAVQ 158 (227)
T ss_dssp HHHHHHTCSEEEECTTS--SCHHHHHHHH---TT-SEEEEEECSHHH---HHHHHHHTCSEEEECCSSCCCSSSSCCCCC
T ss_pred HHHHHcCCCEEEECCCc--cCHHHHHHhc---CC-cEEEEecCCHHH---HHHHHhCCCCEEEECCCcCCCCCCCCCCcc
Confidence 45667899999886432 2355555443 33 222222344322 3333333 899998541 11 1122
Q ss_pred CCCCHHHHHHHHHHHHHHcC-CCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHH
Q 008319 346 PIEDVPLLQEDIIRRCRSMQ-KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 424 (570)
Q Consensus 346 g~~~v~~~qk~Ii~~c~~~g-KPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~ 424 (570)
+++.+ +++ +.... +|++.+. ...|. ++..+...|+|++.+.+--...+.|.++++.+.+
T Consensus 159 ~~~~l----~~~---~~~~~~~pvia~G--------GI~~~-----nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~ 218 (227)
T 2tps_A 159 GVSLI----EAV---RRQGISIPIVGIG--------GITID-----NAAPVIQAGADGVSMISAISQAEDPESAARKFRE 218 (227)
T ss_dssp TTHHH----HHH---HHTTCCCCEEEES--------SCCTT-----TSHHHHHTTCSEEEESHHHHTSSCHHHHHHHHHH
T ss_pred CHHHH----HHH---HHhCCCCCEEEEc--------CCCHH-----HHHHHHHcCCCEEEEhHHhhcCCCHHHHHHHHHH
Confidence 22221 222 22335 8988752 22222 3445667899999988655455778888887777
Q ss_pred HHHHh
Q 008319 425 VALRT 429 (570)
Q Consensus 425 I~~~a 429 (570)
.+++.
T Consensus 219 ~~~~~ 223 (227)
T 2tps_A 219 EIQTY 223 (227)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 66543
No 103
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=73.42 E-value=29 Score=34.67 Aligned_cols=128 Identities=11% Similarity=0.132 Sum_probs=75.4
Q ss_pred HhhhhhhcCCcEEEecC-CCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh----CCEEEEcCCCcccCCC
Q 008319 272 DIKFGVDNQVDFYAVSF-VKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVARGDLGAELP 346 (570)
Q Consensus 272 dI~~~~~~gvd~I~~Sf-V~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~----sDgImIgrGDLg~eig 346 (570)
.+..+...|+|.|.+-- .-+.+++.++.++..+.| +.+++-+- |.+|+..+ +|.|-+..-||.. +.
T Consensus 134 qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lG--l~~lvevh------~~eEl~~A~~~ga~iIGinnr~l~t-~~ 204 (272)
T 3tsm_A 134 QVYEARSWGADCILIIMASVDDDLAKELEDTAFALG--MDALIEVH------DEAEMERALKLSSRLLGVNNRNLRS-FE 204 (272)
T ss_dssp HHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHTT--CEEEEEEC------SHHHHHHHTTSCCSEEEEECBCTTT-CC
T ss_pred HHHHHHHcCCCEEEEcccccCHHHHHHHHHHHHHcC--CeEEEEeC------CHHHHHHHHhcCCCEEEECCCCCcc-CC
Confidence 46667789999976652 234566666666666654 34444443 44444333 7888887666643 12
Q ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHH
Q 008319 347 IEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 423 (570)
Q Consensus 347 ~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~ 423 (570)
. ++ ..-.+++.... .++|++. .+..-|.. |+..+...|+|+++...---....|.++++.|.
T Consensus 205 ~-dl-~~~~~L~~~ip-~~~~vIa---------esGI~t~e---dv~~l~~~Ga~gvLVG~almr~~d~~~~~~~l~ 266 (272)
T 3tsm_A 205 V-NL-AVSERLAKMAP-SDRLLVG---------ESGIFTHE---DCLRLEKSGIGTFLIGESLMRQHDVAAATRALL 266 (272)
T ss_dssp B-CT-HHHHHHHHHSC-TTSEEEE---------ESSCCSHH---HHHHHHTTTCCEEEECHHHHTSSCHHHHHHHHH
T ss_pred C-Ch-HHHHHHHHhCC-CCCcEEE---------ECCCCCHH---HHHHHHHcCCCEEEEcHHHcCCcCHHHHHHHHH
Confidence 1 11 11122332221 2567663 45555554 566778899999998544446778888887754
No 104
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=72.41 E-value=36 Score=34.61 Aligned_cols=123 Identities=15% Similarity=0.240 Sum_probs=64.7
Q ss_pred hhhHHHhhhhhhcC--CcEEEecCCC-ChhHHHHHHHHHHhcCCCceEEEe-ecCcchhhhHHHHHHh-CCEEEEcC--C
Q 008319 267 DKDWEDIKFGVDNQ--VDFYAVSFVK-DAKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVAR--G 339 (570)
Q Consensus 267 ~kD~~dI~~~~~~g--vd~I~~SfV~-sa~dv~~vr~~l~~~~~~i~IiaK-IEt~~gv~NldeIl~~-sDgImIgr--G 339 (570)
+.+.+.++...+.| +|+|.+.... ......+.-+.+.+.-..+.++.. |-+ .+......+. +|+|.++- |
T Consensus 105 ~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~~~~~vi~G~v~s---~e~A~~a~~aGad~Ivvs~hgG 181 (336)
T 1ypf_A 105 EDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHLPESFVIAGNVGT---PEAVRELENAGADATKVGIGPG 181 (336)
T ss_dssp HHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHCTTSEEEEEEECS---HHHHHHHHHHTCSEEEECSSCS
T ss_pred HHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhCCCCEEEECCcCC---HHHHHHHHHcCCCEEEEecCCC
Confidence 45666677777888 8988664321 222221222223222233566654 544 3444555555 99999941 1
Q ss_pred C-c-c---cCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 340 D-L-G---AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 340 D-L-g---~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
= + + ...+.+.+ ....+.+.++..+.|||.+. ..- ...|+..++..|+|++|+.
T Consensus 182 ~~~~~~~~~~~g~~g~--~~~~l~~v~~~~~ipVIa~G---------GI~---~g~Dv~kalalGAdaV~iG 239 (336)
T 1ypf_A 182 KVCITKIKTGFGTGGW--QLAALRWCAKAASKPIIADG---------GIR---TNGDVAKSIRFGATMVMIG 239 (336)
T ss_dssp TTCHHHHHHSCSSTTC--HHHHHHHHHHTCSSCEEEES---------CCC---STHHHHHHHHTTCSEEEES
T ss_pred ceeecccccCcCCchh--HHHHHHHHHHHcCCcEEEeC---------CCC---CHHHHHHHHHcCCCEEEeC
Confidence 0 0 0 00111110 12233344445589999642 222 2457889999999999985
No 105
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=72.25 E-value=45 Score=33.03 Aligned_cols=124 Identities=10% Similarity=0.121 Sum_probs=78.5
Q ss_pred HHHhhhhhhcCCcEEEecCCC--C---------hhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHhCCEEEEcC
Q 008319 270 WEDIKFGVDNQVDFYAVSFVK--D---------AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVAR 338 (570)
Q Consensus 270 ~~dI~~~~~~gvd~I~~SfV~--s---------a~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDgImIgr 338 (570)
++-++.+.+.|+|+|....-. + .+.+..++++.++. .+.+++-+-.++.++-+.+ .+|.+-||.
T Consensus 40 ~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~--Gl~~~te~~d~~~~~~l~~---~vd~~kIga 114 (262)
T 1zco_A 40 MKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEY--GLVTVTEVMDTRHVELVAK---YSDILQIGA 114 (262)
T ss_dssp HHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECCCGGGHHHHHH---HCSEEEECG
T ss_pred HHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHc--CCcEEEeeCCHHhHHHHHh---hCCEEEECc
Confidence 355566678899988665321 1 56777888888664 4788898877777666555 489999998
Q ss_pred CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHh-Cc-cEEEe-cccccCCCCH
Q 008319 339 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE-GA-DAVML-SGETAHGKFP 415 (570)
Q Consensus 339 GDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~-G~-D~vmL-s~ETA~G~yP 415 (570)
+++. . ..+++.+.+.||||++.|. ..+|..|+.+.+..+.. |. +.+++ .|=+..-+||
T Consensus 115 ~~~~------n-----~~ll~~~a~~~kPV~lk~G--------~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~ 175 (262)
T 1zco_A 115 RNSQ------N-----FELLKEVGKVENPVLLKRG--------MGNTIQELLYSAEYIMAQGNENVILCERGIRTFETAT 175 (262)
T ss_dssp GGTT------C-----HHHHHHHTTSSSCEEEECC--------TTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSS
T ss_pred cccc------C-----HHHHHHHHhcCCcEEEecC--------CCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcC
Confidence 7663 2 2234445568999998533 23477787777666654 54 44443 2212223566
Q ss_pred HH
Q 008319 416 LK 417 (570)
Q Consensus 416 ~e 417 (570)
.+
T Consensus 176 ~~ 177 (262)
T 1zco_A 176 RF 177 (262)
T ss_dssp SS
T ss_pred hh
Confidence 54
No 106
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=72.11 E-value=15 Score=36.81 Aligned_cols=97 Identities=15% Similarity=0.159 Sum_probs=58.6
Q ss_pred HHhhhhhhcCCcEEEec------CC-CChhHHHHHHHHHHhcCCCceEEEee---cCcchhhhHHHHHHh-CCEEEEcCC
Q 008319 271 EDIKFGVDNQVDFYAVS------FV-KDAKVVHELKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 339 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S------fV-~sa~dv~~vr~~l~~~~~~i~IiaKI---Et~~gv~NldeIl~~-sDgImIgrG 339 (570)
+.+++-++.|+|++.+. +. ...|..+-++...+..+.+++||+-+ -|.++++.....-+. +|++++-+-
T Consensus 27 ~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 106 (292)
T 3daq_A 27 AHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITP 106 (292)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCC
Confidence 44567789999998764 11 22233333444555557789999987 356666666665555 899999764
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
.+.- ..-+.+...-+.| +.+.+.|+++.
T Consensus 107 ~y~~-~~~~~l~~~f~~i---a~a~~lPiilY 134 (292)
T 3daq_A 107 YYNK-TNQRGLVKHFEAI---ADAVKLPVVLY 134 (292)
T ss_dssp CSSC-CCHHHHHHHHHHH---HHHHCSCEEEE
T ss_pred CCCC-CCHHHHHHHHHHH---HHhCCCCEEEE
Confidence 4321 1212343444444 44458999975
No 107
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=71.92 E-value=11 Score=38.27 Aligned_cols=100 Identities=15% Similarity=0.119 Sum_probs=59.6
Q ss_pred HHhhhhhhcCCcEEEec-------CCCChhHHHHHHHHHHhcCCCceEEEee---cCcchhhhHHHHHHh-CCEEEEcCC
Q 008319 271 EDIKFGVDNQVDFYAVS-------FVKDAKVVHELKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 339 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S-------fV~sa~dv~~vr~~l~~~~~~i~IiaKI---Et~~gv~NldeIl~~-sDgImIgrG 339 (570)
+.+++-++.|+|++.+. .....|..+-++...+..+.+++||+-+ -|.++++.....-+. +|++++-+-
T Consensus 33 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 112 (309)
T 3fkr_A 33 RAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPP 112 (309)
T ss_dssp HHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 44567789999998773 2222333333444555557789999977 355666666555555 899999765
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
....-.. +.-..+.+..-..|.+.+.|+++.
T Consensus 113 yy~~~~~-~s~~~l~~~f~~va~a~~lPiilY 143 (309)
T 3fkr_A 113 YHGATFR-VPEAQIFEFYARVSDAIAIPIMVQ 143 (309)
T ss_dssp CBTTTBC-CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCccCCC-CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 4321011 122233344444455669999985
No 108
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=71.87 E-value=50 Score=35.60 Aligned_cols=121 Identities=15% Similarity=0.116 Sum_probs=72.0
Q ss_pred HHHhhhhhhcCCcEEEecCC--CChhHHHHHHHHHHhcCCC-ceEE-EeecCcchhhhHHHHHHhCCEEEEcCCCccc--
Q 008319 270 WEDIKFGVDNQVDFYAVSFV--KDAKVVHELKDYLKSCNAD-IHVI-VKIESADSIPNLHSIISASDGAMVARGDLGA-- 343 (570)
Q Consensus 270 ~~dI~~~~~~gvd~I~~SfV--~sa~dv~~vr~~l~~~~~~-i~Ii-aKIEt~~gv~NldeIl~~sDgImIgrGDLg~-- 343 (570)
.+.++...+.|++.+.+..- .+...+..+ +++.+...+ +.++ ..|.|.+..+.+.+. -+|++.+|-|-=+.
T Consensus 244 ~e~~~~l~e~gv~~l~Vd~~~g~~~~~~~~i-~~lk~~~~~~~~Vi~G~V~t~~~a~~l~~a--Gad~I~Vg~~~g~~~~ 320 (503)
T 1me8_A 244 RERVPALVEAGADVLCIDSSDGFSEWQKITI-GWIREKYGDKVKVGAGNIVDGEGFRYLADA--GADFIKIGIGGGSICI 320 (503)
T ss_dssp HHHHHHHHHHTCSEEEECCSCCCSHHHHHHH-HHHHHHHGGGSCEEEEEECSHHHHHHHHHH--TCSEEEECSSCSTTCC
T ss_pred HHHHHHHHhhhccceEEecccCcccchhhHH-HHHHHhCCCCceEeeccccCHHHHHHHHHh--CCCeEEecccCCcCcc
Confidence 34466667889998876322 222222223 334333223 4444 578887766554432 28999987533111
Q ss_pred -----CCCCCCHHHHHHHHHHHHHHc------CCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 344 -----ELPIEDVPLLQEDIIRRCRSM------QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 344 -----eig~~~v~~~qk~Ii~~c~~~------gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
..|.+ -..+..++.+.|++. +.|+|.+. ..-+ -.|++.|+..|||++|+.
T Consensus 321 ~r~~~~~g~p-~~~~l~~v~~~~~~~~~~~~~~ipvia~G---------Gi~~---~~di~kAlalGA~~V~iG 381 (503)
T 1me8_A 321 TREQKGIGRG-QATAVIDVVAERNKYFEETGIYIPVCSDG---------GIVY---DYHMTLALAMGADFIMLG 381 (503)
T ss_dssp STTTTCCCCC-HHHHHHHHHHHHHHHHHHHSEECCEEEES---------CCCS---HHHHHHHHHTTCSEEEES
T ss_pred cccccCCCCc-hHHHHHHHHHHHHHHhhhcCCCceEEEeC---------CCCC---HHHHHHHHHcCCCEEEEC
Confidence 12333 344556777788877 89998642 2222 457999999999999995
No 109
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=71.87 E-value=85 Score=31.39 Aligned_cols=195 Identities=14% Similarity=0.092 Sum_probs=114.1
Q ss_pred CCChhhHHHhhhh-hhcCCcEEEecC-CCChhHHHHHHHHHHhcCCCceEEEeecCc-chhhhHHHHHHh-----CC--E
Q 008319 264 SITDKDWEDIKFG-VDNQVDFYAVSF-VKDAKVVHELKDYLKSCNADIHVIVKIESA-DSIPNLHSIISA-----SD--G 333 (570)
Q Consensus 264 ~lt~kD~~dI~~~-~~~gvd~I~~Sf-V~sa~dv~~vr~~l~~~~~~i~IiaKIEt~-~gv~NldeIl~~-----sD--g 333 (570)
.++..|+..|... .+.|+|.|=+.| ..++.|...++...+. ..+..+.+-.-+. .+ ++..++. .| .
T Consensus 23 ~~~~~~K~~i~~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~~~~~~d---i~~a~~~~~~ag~~~v~ 98 (293)
T 3ewb_X 23 NFDVKEKIQIALQLEKLGIDVIEAGFPISSPGDFECVKAIAKA-IKHCSVTGLARCVEGD---IDRAEEALKDAVSPQIH 98 (293)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEECGGGCHHHHHHHHHHHHH-CCSSEEEEEEESSHHH---HHHHHHHHTTCSSEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccHHHHHHHHHHh-cCCCEEEEEecCCHHH---HHHHHHHHhhcCCCEEE
Confidence 3567787666544 468999986654 4567777777765543 4556666655332 23 3333332 34 4
Q ss_pred EEEcCCCccc----CCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHH-HHHhCccEEEeccc
Q 008319 334 AMVARGDLGA----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSGE 408 (570)
Q Consensus 334 ImIgrGDLg~----eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vmLs~E 408 (570)
++++-.|+-. ....++.....+++++.++++|..|.+... ..+.-+...+.+++. +...|+|.+.|. +
T Consensus 99 i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~------d~~~~~~~~~~~~~~~~~~~G~~~i~l~-D 171 (293)
T 3ewb_X 99 IFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPE------DATRSDRAFLIEAVQTAIDAGATVINIP-D 171 (293)
T ss_dssp EEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEE------TGGGSCHHHHHHHHHHHHHTTCCEEEEE-C
T ss_pred EEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEec------cCCCCCHHHHHHHHHHHHHcCCCEEEec-C
Confidence 5555555432 233356677778999999999999886432 111222233455544 566899999985 7
Q ss_pred ccCCCCHHHHHHHHHHHHHHhhcC--CCCCCCCCCcccCCCCChhHHHHHHHHHHHhhcCCcEEEEcCChHH
Q 008319 409 TAHGKFPLKAVKVMHTVALRTESS--LPVSITPPTQFSAHKSHMGDMFAFHSTTMANTLNTPIIVFTRTGSM 478 (570)
Q Consensus 409 TA~G~yP~eaV~~m~~I~~~aE~~--~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~Iiv~T~sG~t 478 (570)
|.=.-.|.++-+.+..+..+.-.. ....-++ -++..- |.+-...|-+.++-.|=.|-.|.-
T Consensus 172 T~G~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~-------Hnd~Gl--a~AN~laA~~aGa~~vd~sv~GlG 234 (293)
T 3ewb_X 172 TVGYTNPTEFGQLFQDLRREIKQFDDIIFASHC-------HDDLGM--ATANALAAIENGARRVEGTINGIG 234 (293)
T ss_dssp SSSCCCHHHHHHHHHHHHHHCTTGGGSEEEEEC-------BCTTSC--HHHHHHHHHHTTCCEEEEBGGGCC
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCccCceEEEEe-------CCCcCh--HHHHHHHHHHhCCCEEEeeccccc
Confidence 877788999888888887665311 1111111 122222 333345566667765656665544
No 110
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=70.73 E-value=85 Score=32.57 Aligned_cols=159 Identities=12% Similarity=0.123 Sum_probs=99.3
Q ss_pred CCChhhHHHhhhh-hhcCCcEEEe-cCCCChhHHHHHHHHHHhcCCCceEEEeec-CcchhhhHHHHHH-h-CC--EEEE
Q 008319 264 SITDKDWEDIKFG-VDNQVDFYAV-SFVKDAKVVHELKDYLKSCNADIHVIVKIE-SADSIPNLHSIIS-A-SD--GAMV 336 (570)
Q Consensus 264 ~lt~kD~~dI~~~-~~~gvd~I~~-SfV~sa~dv~~vr~~l~~~~~~i~IiaKIE-t~~gv~NldeIl~-~-sD--gImI 336 (570)
.++..|+-.|... .+.|+|.|=+ +|+.++.|...++...+. ..+..+.+-.= +..+++..-+-+. . .| .+++
T Consensus 30 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~r~~~~di~~a~~al~~ag~~~v~if~ 108 (370)
T 3rmj_A 30 AMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKT-ITKSTVCSLSRAIERDIRQAGEAVAPAPKKRIHTFI 108 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEEGGGCHHHHHHHHHHHTT-CSSSEEEEEEESSHHHHHHHHHHHTTSSSEEEEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHh-CCCCeEEEEecCCHHHHHHHHHHHhhCCCCEEEEEe
Confidence 4677888766554 4689999855 466778888888876643 34554444331 3333332222111 1 34 4566
Q ss_pred cCCCccc----CCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHH-HHHHhCccEEEecccccC
Q 008319 337 ARGDLGA----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIA-IAVREGADAVMLSGETAH 411 (570)
Q Consensus 337 grGDLg~----eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~-nav~~G~D~vmLs~ETA~ 411 (570)
+--|+-. .+..+++.....++++.|+++|..|.+..+ ....-+...+.+++ .+...|+|.+.|. +|.=
T Consensus 109 ~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~e------d~~r~~~~~~~~~~~~~~~~Ga~~i~l~-DT~G 181 (370)
T 3rmj_A 109 ATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCE------DALRSEIDFLAEICGAVIEAGATTINIP-DTVG 181 (370)
T ss_dssp ECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEE------TGGGSCHHHHHHHHHHHHHHTCCEEEEE-CSSS
T ss_pred cCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecC------CCCccCHHHHHHHHHHHHHcCCCEEEec-CccC
Confidence 6666532 233356666677899999999998876432 11111222244444 4567899999995 8888
Q ss_pred CCCHHHHHHHHHHHHHHhh
Q 008319 412 GKFPLKAVKVMHTVALRTE 430 (570)
Q Consensus 412 G~yP~eaV~~m~~I~~~aE 430 (570)
.-.|.++-+.+..+..+.-
T Consensus 182 ~~~P~~~~~lv~~l~~~~~ 200 (370)
T 3rmj_A 182 YSIPYKTEEFFRELIAKTP 200 (370)
T ss_dssp CCCHHHHHHHHHHHHHHST
T ss_pred CcCHHHHHHHHHHHHHhCC
Confidence 8889999999888877653
No 111
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=70.73 E-value=98 Score=31.66 Aligned_cols=79 Identities=13% Similarity=0.099 Sum_probs=50.3
Q ss_pred hcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh--CCEEEEcCCCcccCCCCCCHHHHHH
Q 008319 278 DNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQE 355 (570)
Q Consensus 278 ~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~--sDgImIgrGDLg~eig~~~v~~~qk 355 (570)
+.|+ +|--|+- ++..++++-+ ...++|++ =|+....+.+.++++. +|+|++.++-.|- + .--.
T Consensus 214 ~~~i-~iE~P~~----~~~~~~~l~~--~~~iPI~~-de~i~~~~~~~~~i~~~~~d~v~ik~~~~GG------i-t~~~ 278 (379)
T 2rdx_A 214 DLDY-ILEQPCR----SYEECQQVRR--VADQPMKL-DECVTGLHMAQRIVADRGAEICCLKISNLGG------L-SKAR 278 (379)
T ss_dssp TSCC-EEECCSS----SHHHHHHHHT--TCCSCEEE-CTTCCSHHHHHHHHHHTCCSEEEEETTTTTS------H-HHHH
T ss_pred hCCe-EEeCCcC----CHHHHHHHHh--hCCCCEEE-eCCcCCHHHHHHHHHcCCCCEEEEeccccCC------H-HHHH
Confidence 3556 6555543 3333333221 12456554 5777777788888766 9999997665542 2 2335
Q ss_pred HHHHHHHHcCCCEEEE
Q 008319 356 DIIRRCRSMQKPVIVA 371 (570)
Q Consensus 356 ~Ii~~c~~~gKPviva 371 (570)
+++..|+++|.++.+.
T Consensus 279 ~i~~~A~~~g~~~~~~ 294 (379)
T 2rdx_A 279 RTRDFLIDNRMPVVAE 294 (379)
T ss_dssp HHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHcCCeEEEe
Confidence 7899999999999874
No 112
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=70.70 E-value=40 Score=32.27 Aligned_cols=138 Identities=9% Similarity=-0.000 Sum_probs=80.0
Q ss_pred hhhcCCcEEEecCCCChhHHHHHHHHHHhcCCC-ceEEEeecCcchhhhHHHHHHh-CCEEEEcCCCcccCCCCCCHHHH
Q 008319 276 GVDNQVDFYAVSFVKDAKVVHELKDYLKSCNAD-IHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLL 353 (570)
Q Consensus 276 ~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~-i~IiaKIEt~~gv~NldeIl~~-sDgImIgrGDLg~eig~~~v~~~ 353 (570)
+.+.|+|++.+-..-..+.++.+++.+++.|.. ..+.+-+=|....+.+.++++. .|-+.+.++-++-.-|...-+.-
T Consensus 78 ~~~~Gad~vtVH~~~g~~~l~~a~~~~~~~g~~~~~~~Vt~lts~~~~~~~~~~~~~~~~~v~~~a~~~~~~Gvv~s~~e 157 (221)
T 3exr_A 78 NAVRGADWMTCICSATIPTMKAARKAIEDINPDKGEIQVELYGDWTYDQAQQWLDAGISQAIYHQSRDALLAGETWGEKD 157 (221)
T ss_dssp HHTTTCSEEEEETTSCHHHHHHHHHHHHHHCTTTCEEEEECCSSCCHHHHHHHHHTTCCEEEEECCHHHHHHTCCCCHHH
T ss_pred HHHcCCCEEEEeccCCHHHHHHHHHHHHhcCCCcceEEEEEcCCCCHHHHHHHHcCCHHHHHHHHHHhcCCCccccCHHH
Confidence 467899998886555556688888888776632 2333333233356777777763 77777766655443232111111
Q ss_pred HHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHH
Q 008319 354 QEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVAL 427 (570)
Q Consensus 354 qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~ 427 (570)
-+.+ +.....+.++.+. -.-.|.. ...++..|+|.++.-.--.....|.++++.+.+...
T Consensus 158 ~~~i-r~~~~~~~~i~v~--------gGI~~~~-----~~~~~~aGad~~VvG~~I~~a~dp~~a~~~~~~~~~ 217 (221)
T 3exr_A 158 LNKV-KKLIEMGFRVSVT--------GGLSVDT-----LKLFEGVDVFTFIAGRGITEAKNPAGAARAFKDEIK 217 (221)
T ss_dssp HHHH-HHHHHHTCEEEEE--------SSCCGGG-----GGGGTTCCCSEEEECHHHHTSSSHHHHHHHHHHHHH
T ss_pred HHHH-HHhhcCCceEEEE--------CCCCHHH-----HHHHHHCCCCEEEECchhhCCCCHHHHHHHHHHHHH
Confidence 1222 2222334554442 2233332 335688999999986543445679999988877654
No 113
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=70.16 E-value=7.7 Score=37.21 Aligned_cols=125 Identities=10% Similarity=0.112 Sum_probs=63.0
Q ss_pred HhhhhhhcCCcEEEec-----CCCChhHHHHHHHHHHhcCCCceEEE--eecCcchhhhHHHHHHh-CCEEEEcCCCccc
Q 008319 272 DIKFGVDNQVDFYAVS-----FVKDAKVVHELKDYLKSCNADIHVIV--KIESADSIPNLHSIISA-SDGAMVARGDLGA 343 (570)
Q Consensus 272 dI~~~~~~gvd~I~~S-----fV~sa~dv~~vr~~l~~~~~~i~Iia--KIEt~~gv~NldeIl~~-sDgImIgrGDLg~ 343 (570)
..+...+.|+|+|-+. |...... ..+++..+.. ++++++ .|.+++ .+++.++. +|+|.+++..|.-
T Consensus 37 ~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~--~ipv~v~ggI~~~~---~~~~~l~~Gad~V~lg~~~l~~ 110 (244)
T 1vzw_A 37 AALAWQRSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQAM--DIKVELSGGIRDDD---TLAAALATGCTRVNLGTAALET 110 (244)
T ss_dssp HHHHHHHTTCSEEEEEEHHHHHTSCCCH-HHHHHHHHHC--SSEEEEESSCCSHH---HHHHHHHTTCSEEEECHHHHHC
T ss_pred HHHHHHHcCCCEEEEecCchhhcCCChH-HHHHHHHHhc--CCcEEEECCcCCHH---HHHHHHHcCCCEEEECchHhhC
Confidence 3455668899998763 4444444 4444443332 456665 466654 46666666 9999998765532
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCCEEEEccchh-hh-hcCC---CcChHHHhHHHHHHHhCccEEEecccccCCCC
Q 008319 344 ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLE-SM-IDHP---TPTRAEVSDIAIAVREGADAVMLSGETAHGKF 414 (570)
Q Consensus 344 eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLe-SM-~~~~---~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~y 414 (570)
|. .+.+..+..|..++++-.... .. .+.- .++. ...+..+...|+|.+++++-+.-|.+
T Consensus 111 -------p~---~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~--~e~~~~~~~~G~~~i~~~~~~~~~~~ 174 (244)
T 1vzw_A 111 -------PE---WVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDL--YETLDRLNKEGCARYVVTDIAKDGTL 174 (244)
T ss_dssp -------HH---HHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBH--HHHHHHHHHTTCCCEEEEEC------
T ss_pred -------HH---HHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCH--HHHHHHHHhCCCCEEEEeccCccccc
Confidence 12 233334444544444322110 00 0100 0122 22345566789999998766555543
No 114
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=70.15 E-value=29 Score=36.01 Aligned_cols=114 Identities=18% Similarity=0.274 Sum_probs=60.2
Q ss_pred hhhhhcCCcEEEec-------CCC---ChhHHHHHHHHHHhcCCCceEEEe-ecCcchhhhHHHHHHh-CCEEEEcCCCc
Q 008319 274 KFGVDNQVDFYAVS-------FVK---DAKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVARGDL 341 (570)
Q Consensus 274 ~~~~~~gvd~I~~S-------fV~---sa~dv~~vr~~l~~~~~~i~IiaK-IEt~~gv~NldeIl~~-sDgImIgrGDL 341 (570)
+...+.|+|++.+. +.. +.+++.++++ . .+++++++ |-|++ ......+. +|+|++++|--
T Consensus 172 ~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~---~--~~~pvi~ggi~t~e---~a~~~~~~Gad~i~vg~Gg~ 243 (393)
T 2qr6_A 172 PIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIG---S--LDVPVIAGGVNDYT---TALHMMRTGAVGIIVGGGEN 243 (393)
T ss_dssp HHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHH---H--CSSCEEEECCCSHH---HHHHHHTTTCSEEEESCCSC
T ss_pred HHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHH---h--cCCCEEECCcCCHH---HHHHHHHcCCCEEEECCCcc
Confidence 33346789988664 222 2234444433 3 25677774 33333 23333334 99999987531
Q ss_pred cc----CCCCCCHHHHHHHHHHHH----HHcC---CCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEeccc
Q 008319 342 GA----ELPIEDVPLLQEDIIRRC----RSMQ---KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGE 408 (570)
Q Consensus 342 g~----eig~~~v~~~qk~Ii~~c----~~~g---KPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~E 408 (570)
+. ..+.+ ......++.+.+ .+.+ .|+|.+ ...-+ -.|+..++..|+|++++..-
T Consensus 244 ~~~~~~~~g~~-~~~~l~~v~~~~~~~~~~~~~~~ipvia~---------GGI~~---~~dv~kalalGA~~V~iG~~ 308 (393)
T 2qr6_A 244 TNSLALGMEVS-MATAIADVAAARRDYLDETGGRYVHIIAD---------GSIEN---SGDVVKAIACGADAVVLGSP 308 (393)
T ss_dssp CHHHHTSCCCC-HHHHHHHHHHHHHHHHHHHTSCCCEEEEC---------SSCCS---HHHHHHHHHHTCSEEEECGG
T ss_pred cccccCCCCCC-hHHHHHHHHHHHHHhHhhcCCcceEEEEE---------CCCCC---HHHHHHHHHcCCCEEEECHH
Confidence 11 11222 222333334443 2244 788853 23322 45789999999999998643
No 115
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=69.96 E-value=35 Score=32.29 Aligned_cols=132 Identities=14% Similarity=0.119 Sum_probs=70.5
Q ss_pred hHHHhhhhhhcCCcEEEecCCCC--h--hHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEE---EEcC--
Q 008319 269 DWEDIKFGVDNQVDFYAVSFVKD--A--KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGA---MVAR-- 338 (570)
Q Consensus 269 D~~dI~~~~~~gvd~I~~SfV~s--a--~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgI---mIgr-- 338 (570)
+.+.++.+.+.|+|+|.+..... + ..+.++-+.+.+...+..++..+.|.+- .....+. +|.| +.+.
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~t~~e---a~~a~~~Gad~i~~~v~g~~~ 166 (234)
T 1yxy_A 90 TMTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMADISTFDE---GLVAHQAGIDFVGTTLSGYTP 166 (234)
T ss_dssp SHHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECSSHHH---HHHHHHTTCSEEECTTTTSST
T ss_pred hHHHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEEeCCCHHH---HHHHHHcCCCEEeeeccccCC
Confidence 34567778899999997754322 2 1222322333333235677777766543 2222223 7887 2332
Q ss_pred CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHH
Q 008319 339 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKA 418 (570)
Q Consensus 339 GDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~ea 418 (570)
+.... .+ .++.. .+++ +.. +.|++.. ...-+.. ++..++..|+|++++.. ++=+ |.++
T Consensus 167 ~~~~~-~~-~~~~~-i~~~---~~~-~ipvia~---------GGI~s~~---~~~~~~~~Gad~v~vGs--al~~-p~~~ 224 (234)
T 1yxy_A 167 YSRQE-AG-PDVAL-IEAL---CKA-GIAVIAE---------GKIHSPE---EAKKINDLGVAGIVVGG--AITR-PKEI 224 (234)
T ss_dssp TSCCS-SS-CCHHH-HHHH---HHT-TCCEEEE---------SCCCSHH---HHHHHHTTCCSEEEECH--HHHC-HHHH
T ss_pred CCcCC-CC-CCHHH-HHHH---HhC-CCCEEEE---------CCCCCHH---HHHHHHHCCCCEEEEch--HHhC-hHHH
Confidence 22111 11 23322 2222 223 7998863 3443333 45566778999999864 3323 8888
Q ss_pred HHHHHHH
Q 008319 419 VKVMHTV 425 (570)
Q Consensus 419 V~~m~~I 425 (570)
++.+.+.
T Consensus 225 ~~~l~~~ 231 (234)
T 1yxy_A 225 AERFIEA 231 (234)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877654
No 116
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=69.94 E-value=57 Score=34.68 Aligned_cols=123 Identities=18% Similarity=0.195 Sum_probs=73.3
Q ss_pred hhhHHHhhhhhhcCCcEEEecCCC-ChhHH-HHHHHHHHhcCCCceEE-EeecCcchhhhHHHHHHh-CCEEEEcCCC--
Q 008319 267 DKDWEDIKFGVDNQVDFYAVSFVK-DAKVV-HELKDYLKSCNADIHVI-VKIESADSIPNLHSIISA-SDGAMVARGD-- 340 (570)
Q Consensus 267 ~kD~~dI~~~~~~gvd~I~~SfV~-sa~dv-~~vr~~l~~~~~~i~Ii-aKIEt~~gv~NldeIl~~-sDgImIgrGD-- 340 (570)
+...+.+++..+.|+|.|.+.... ..+.. ..++.+.+.. .++.++ ..+-+.+... ..++. +|+|.+|-|-
T Consensus 232 ~~~~~~a~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~~~-p~~pvi~G~v~t~~~a~---~~~~~Gad~I~vg~g~g~ 307 (491)
T 1zfj_A 232 SDTFERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAHF-PNRTLIAGNIATAEGAR---ALYDAGVDVVKVGIGPGS 307 (491)
T ss_dssp TTHHHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHHC-SSSCEEEEEECSHHHHH---HHHHTTCSEEEECSSCCT
T ss_pred hhHHHHHHHHHHcCCCeEEEeeecCcchhHHHHHHHHHHHC-CCCcEeCCCccCHHHHH---HHHHcCCCEEEECccCCc
Confidence 345677888899999999887531 11222 2233322222 244444 3555554433 33334 9999997431
Q ss_pred ccc-----CCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 341 LGA-----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 341 Lg~-----eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
... ..+.+ .....+++...++..+.|+|.. ...-+ ..|+..++..|+|++++.
T Consensus 308 ~~~tr~~~~~~~p-~~~~l~~~~~~~~~~~ipvia~---------GGi~~---~~di~kal~~GA~~v~vG 365 (491)
T 1zfj_A 308 ICTTRVVAGVGVP-QVTAIYDAAAVAREYGKTIIAD---------GGIKY---SGDIVKALAAGGNAVMLG 365 (491)
T ss_dssp TBCHHHHTCCCCC-HHHHHHHHHHHHHHTTCEEEEE---------SCCCS---HHHHHHHHHTTCSEEEES
T ss_pred ceEEeeecCCCCC-cHHHHHHHHHHHhhcCCCEEee---------CCCCC---HHHHHHHHHcCCcceeeC
Confidence 000 11222 3455577788888889999864 23222 457889999999999984
No 117
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=69.93 E-value=84 Score=32.55 Aligned_cols=119 Identities=18% Similarity=0.295 Sum_probs=78.7
Q ss_pred HHHhhhhhhcCCcEEEec--------------CC----------------CChhHHHHHHHHHHhcCCCceEEEeecCcc
Q 008319 270 WEDIKFGVDNQVDFYAVS--------------FV----------------KDAKVVHELKDYLKSCNADIHVIVKIESAD 319 (570)
Q Consensus 270 ~~dI~~~~~~gvd~I~~S--------------fV----------------~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~ 319 (570)
++-++.+.+.|+|.|=.- |- -..+....++++.++. .+.+++-+=..+
T Consensus 38 ~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~--Gi~~~st~~d~~ 115 (349)
T 2wqp_A 38 FEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESK--GMIFISTLFSRA 115 (349)
T ss_dssp HHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHT--TCEEEEEECSHH
T ss_pred HHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHh--CCeEEEeeCCHH
Confidence 455566778899987432 22 1234455666666654 477888665555
Q ss_pred hhhhHHHHHHh-CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHH-
Q 008319 320 SIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVR- 397 (570)
Q Consensus 320 gv~NldeIl~~-sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~- 397 (570)
+++-+ .+. +|.+=||-+|+. +++ +++.+.+.|||||+.|-| -|..|+...+.++.
T Consensus 116 svd~l---~~~~v~~~KI~S~~~~------n~~-----LL~~va~~gkPviLstGm---------at~~Ei~~Ave~i~~ 172 (349)
T 2wqp_A 116 AALRL---QRMDIPAYKIGSGECN------NYP-----LIKLVASFGKPIILSTGM---------NSIESIKKSVEIIRE 172 (349)
T ss_dssp HHHHH---HHHTCSCEEECGGGTT------CHH-----HHHHHHTTCSCEEEECTT---------CCHHHHHHHHHHHHH
T ss_pred HHHHH---HhcCCCEEEECccccc------CHH-----HHHHHHhcCCeEEEECCC---------CCHHHHHHHHHHHHH
Confidence 55444 445 799999988874 233 466677789999997664 36788888888886
Q ss_pred hCccEEEecccccCCCCHH
Q 008319 398 EGADAVMLSGETAHGKFPL 416 (570)
Q Consensus 398 ~G~D~vmLs~ETA~G~yP~ 416 (570)
.|.+.++|- -+-.||.
T Consensus 173 ~G~~iiLlh---c~s~Yp~ 188 (349)
T 2wqp_A 173 AGVPYALLH---CTNIYPT 188 (349)
T ss_dssp HTCCEEEEE---CCCCSSC
T ss_pred cCCCEEEEe---ccCCCCC
Confidence 467888874 2345775
No 118
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=69.92 E-value=12 Score=33.76 Aligned_cols=61 Identities=20% Similarity=0.143 Sum_probs=35.8
Q ss_pred eeecCCCEEEEEEecCCCCccEEEeccC-------CcccccccCCEEEEeCC----eeEEEEEEE---eCCeEEEEEEeC
Q 008319 179 IILKEGQEFNFTIKRGVSTEDTVSVNYD-------DFVNDVEVGDILLVDGG----MMSLAVKSK---TKDLVKCIVVDG 244 (570)
Q Consensus 179 i~l~~G~~v~lt~~~~~~~~~~i~v~~~-------~l~~~v~~Gd~I~iDDG----~i~l~V~~~---~~~~i~~~v~~g 244 (570)
+..+.|..+++|.+ ..|++... -+.++|++||.|++.|| ...-+|.++ ....++|=....
T Consensus 58 I~t~~g~~L~lTp~------H~i~v~~~~~~~~~~v~A~~l~~GD~v~~~~~~~~~~~~~~V~~v~~~~~~G~yaPlT~~ 131 (145)
T 1at0_A 58 LHTDGGAVLTVTPA------HLVSVWQPESQKLTFVFADRIEEKNQVLVRDVETGELRPQRVVKVGSVRSKGVVAPLTRE 131 (145)
T ss_dssp EEETTSCEEEECTT------CEEEEEETTTTEEEEEEGGGCCTTCEEEEECTTTCCEEEEEEEEEEEEEEEEEEEEEESS
T ss_pred EEECCCCEEEEeCC------CEEEEecCCCCcEEEEEHHHCcCCCEEEEecCCCCCEEEEEEEEEEEEEEeeeEccccCc
Confidence 45556677777654 22343322 26689999999999987 233344443 345566644443
Q ss_pred c
Q 008319 245 G 245 (570)
Q Consensus 245 G 245 (570)
|
T Consensus 132 G 132 (145)
T 1at0_A 132 G 132 (145)
T ss_dssp S
T ss_pred E
Confidence 3
No 119
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=69.92 E-value=37 Score=31.63 Aligned_cols=125 Identities=9% Similarity=0.014 Sum_probs=69.1
Q ss_pred HHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh----CCEEEEcCCCcccCCC
Q 008319 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVARGDLGAELP 346 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~----sDgImIgrGDLg~eig 346 (570)
+++..+.+.|+|+|.++. ... ++ .+..+..|. .++.-+.| .+|+... +|.|.+-+++ ..+
T Consensus 71 ~~i~~a~~~Gad~V~~~~-~~~-~~---~~~~~~~g~--~~~~g~~t------~~e~~~a~~~G~d~v~v~~t~---~~g 134 (212)
T 2v82_A 71 EQVDALARMGCQLIVTPN-IHS-EV---IRRAVGYGM--TVCPGCAT------ATEAFTALEAGAQALKIFPSS---AFG 134 (212)
T ss_dssp HHHHHHHHTTCCEEECSS-CCH-HH---HHHHHHTTC--EEECEECS------HHHHHHHHHTTCSEEEETTHH---HHC
T ss_pred HHHHHHHHcCCCEEEeCC-CCH-HH---HHHHHHcCC--CEEeecCC------HHHHHHHHHCCCCEEEEecCC---CCC
Confidence 467888899999997553 222 22 233444443 33332333 3343322 8999885433 112
Q ss_pred CCCHHHHHHHHHHHHHHc--CCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCC----CCHHHHHH
Q 008319 347 IEDVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHG----KFPLKAVK 420 (570)
Q Consensus 347 ~~~v~~~qk~Ii~~c~~~--gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G----~yP~eaV~ 420 (570)
+ +.+-+.++.. +.|++... ...+ .++..+...|+|++.+.+--..+ ..|.++++
T Consensus 135 ~-------~~~~~l~~~~~~~ipvia~G--------GI~~-----~~i~~~~~~Ga~gv~vGsai~~~~~~~~d~~~~~~ 194 (212)
T 2v82_A 135 P-------QYIKALKAVLPSDIAVFAVG--------GVTP-----ENLAQWIDAGCAGAGLGSDLYRAGQSVERTAQQAA 194 (212)
T ss_dssp H-------HHHHHHHTTSCTTCEEEEES--------SCCT-----TTHHHHHHHTCSEEEECTTTCCTTCCHHHHHHHHH
T ss_pred H-------HHHHHHHHhccCCCeEEEeC--------CCCH-----HHHHHHHHcCCCEEEEChHHhCCCCCHHHHHHHHH
Confidence 1 2222222233 37877642 2222 35667778899999976433333 35788888
Q ss_pred HHHHHHHHhhc
Q 008319 421 VMHTVALRTES 431 (570)
Q Consensus 421 ~m~~I~~~aE~ 431 (570)
.+.+++.++-.
T Consensus 195 ~l~~~~~~~~~ 205 (212)
T 2v82_A 195 AFVKAYREAVQ 205 (212)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88877766653
No 120
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=69.60 E-value=35 Score=32.55 Aligned_cols=133 Identities=11% Similarity=0.079 Sum_probs=68.9
Q ss_pred hHHHhhhhhhcCCcEEEecC--CCChhHHHHHHHHHHhcCCC-ceEE--E-------eecCc--------chhhhHHHHH
Q 008319 269 DWEDIKFGVDNQVDFYAVSF--VKDAKVVHELKDYLKSCNAD-IHVI--V-------KIESA--------DSIPNLHSII 328 (570)
Q Consensus 269 D~~dI~~~~~~gvd~I~~Sf--V~sa~dv~~vr~~l~~~~~~-i~Ii--a-------KIEt~--------~gv~NldeIl 328 (570)
+.+++..+++.|+|.|.+.- ..+++.+.+ +++..+.+ +.+- + ++++. ..++.++.+.
T Consensus 85 ~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~---~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~ 161 (253)
T 1thf_D 85 DFETASELILRGADKVSINTAAVENPSLITQ---IAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVE 161 (253)
T ss_dssp SHHHHHHHHHTTCSEEEESHHHHHCTHHHHH---HHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEEChHHHhChHHHHH---HHHHcCCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHH
Confidence 34567777788999998763 233333433 34333432 2111 1 12221 2344455555
Q ss_pred Hh-CCEEEEcC-C-CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEe
Q 008319 329 SA-SDGAMVAR-G-DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 405 (570)
Q Consensus 329 ~~-sDgImIgr-G-DLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL 405 (570)
+. +|.|++-. . | +...|+ .+ ...+++. ...+.|++. ....-+.. |+..+...|+|++++
T Consensus 162 ~~G~~~i~~~~~~~~-g~~~g~-~~-~~~~~l~---~~~~ipvia---------~GGI~~~~---d~~~~~~~Gadgv~v 223 (253)
T 1thf_D 162 KRGAGEILLTSIDRD-GTKSGY-DT-EMIRFVR---PLTTLPIIA---------SGGAGKME---HFLEAFLAGADAALA 223 (253)
T ss_dssp HTTCSEEEEEETTTT-TSCSCC-CH-HHHHHHG---GGCCSCEEE---------ESCCCSHH---HHHHHHHTTCSEEEE
T ss_pred HCCCCEEEEEeccCC-CCCCCC-CH-HHHHHHH---HhcCCCEEE---------ECCCCCHH---HHHHHHHcCChHHHH
Confidence 56 78888741 1 1 111222 22 2223332 345899885 34444443 455566789999998
Q ss_pred cccccCCC-CHHHHHHHH
Q 008319 406 SGETAHGK-FPLKAVKVM 422 (570)
Q Consensus 406 s~ETA~G~-yP~eaV~~m 422 (570)
..---.+. -|.++++.+
T Consensus 224 Gsal~~~~~~~~~~~~~l 241 (253)
T 1thf_D 224 ASVFHFREIDVRELKEYL 241 (253)
T ss_dssp SHHHHTTCSCHHHHHHHH
T ss_pred HHHHHcCCCCHHHHHHHH
Confidence 64333444 566777664
No 121
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=68.74 E-value=14 Score=36.40 Aligned_cols=148 Identities=15% Similarity=0.119 Sum_probs=82.2
Q ss_pred CCCChhhHHHh-hhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHH-------HHh-CCE
Q 008319 263 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSI-------ISA-SDG 333 (570)
Q Consensus 263 p~lt~kD~~dI-~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeI-------l~~-sDg 333 (570)
|..|+.|.+.+ ..+.++|+..|+++ +..+...+++|+ +.+++|.+=|=-|.|-...+.- ++. +|.
T Consensus 38 p~~t~~~i~~lc~eA~~~~~~aVcV~----p~~v~~a~~~L~--~s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdE 111 (239)
T 3ngj_A 38 ADATEEQIRKLCSEAAEYKFASVCVN----PTWVPLCAELLK--GTGVKVCTVIGFPLGATPSEVKAYETKVAVEQGAEE 111 (239)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHHHHHT--TSSCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHhC--CCCCeEEEEeccCCCCCchHHHHHHHHHHHHcCCCE
Confidence 56677787554 67888999999886 567778888884 4567777767555554333222 222 454
Q ss_pred EEE--cCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHH-HHHhCccEEEeccccc
Q 008319 334 AMV--ARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSGETA 410 (570)
Q Consensus 334 ImI--grGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vmLs~ETA 410 (570)
|=+ ..|-|- +=.++.+..-.+.+.+.|...-.+||+-|-. -|..|+..... +...|+|+|=-|.-=.
T Consensus 112 IDmViNig~lk-~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~---------Lt~eei~~a~~ia~~aGADfVKTSTGf~ 181 (239)
T 3ngj_A 112 VDMVINIGMVK-AKKYDDVEKDVKAVVDASGKALTKVIIECCY---------LTNEEKVEVCKRCVAAGAEYVKTSTGFG 181 (239)
T ss_dssp EEEECCHHHHH-TTCHHHHHHHHHHHHHHHTTSEEEEECCGGG---------SCHHHHHHHHHHHHHHTCSEEECCCSSS
T ss_pred EEEEeehHHhc-cccHHHHHHHHHHHHHHhcCCceEEEEecCC---------CCHHHHHHHHHHHHHHCcCEEECCCCCC
Confidence 322 211110 0001123333445555554322344543332 25566555443 3567999987762211
Q ss_pred CCCCHHHHHHHHHHHH
Q 008319 411 HGKFPLKAVKVMHTVA 426 (570)
Q Consensus 411 ~G~yP~eaV~~m~~I~ 426 (570)
.|.--++.|+.|++.+
T Consensus 182 ~ggAt~~dv~lmr~~v 197 (239)
T 3ngj_A 182 THGATPEDVKLMKDTV 197 (239)
T ss_dssp SCCCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHhh
Confidence 2333468999999876
No 122
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=68.62 E-value=21 Score=35.80 Aligned_cols=98 Identities=9% Similarity=0.050 Sum_probs=59.4
Q ss_pred HHhhhhhhcCCcEEEec------CCCChhHH-HHHHHHHHhcCCCceEEEeec---CcchhhhHHHHHHh-CCEEEEcCC
Q 008319 271 EDIKFGVDNQVDFYAVS------FVKDAKVV-HELKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S------fV~sa~dv-~~vr~~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDgImIgrG 339 (570)
+.++|-++.|+|+|.+. +.=+.++- +-++...+..+.+++||+-+= |.++++.....-+. +|++++-+-
T Consensus 28 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 107 (294)
T 3b4u_A 28 AHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLAPP 107 (294)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 55577889999998763 22333333 334445555566788999874 46666666665555 899999765
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHc---CCCEEEE
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSM---QKPVIVA 371 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~---gKPviva 371 (570)
.+.-..+ -..+.+..-..|.+. +.|+++.
T Consensus 108 ~y~~~~s---~~~l~~~f~~va~a~p~~~lPiilY 139 (294)
T 3b4u_A 108 SYFKNVS---DDGLFAWFSAVFSKIGKDARDILVY 139 (294)
T ss_dssp CSSCSCC---HHHHHHHHHHHHHHHCTTCCCEEEE
T ss_pred cCCCCCC---HHHHHHHHHHHHHhcCCCCCcEEEE
Confidence 4422112 223333333445556 8999975
No 123
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=68.53 E-value=30 Score=34.62 Aligned_cols=125 Identities=20% Similarity=0.221 Sum_probs=72.3
Q ss_pred HHhhhhhhcCCcEE-Eec-------------CCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEE
Q 008319 271 EDIKFGVDNQVDFY-AVS-------------FVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAM 335 (570)
Q Consensus 271 ~dI~~~~~~gvd~I-~~S-------------fV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgIm 335 (570)
+.++.+.+.|+|+| .+- ..++.+.+.++++. .+++++.|+=.- .++.++...+. +|+|.
T Consensus 32 ~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~-----~~iPv~~k~r~g-~~~~~~~~~a~GAd~V~ 105 (305)
T 2nv1_A 32 EQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNA-----VSIPVMAKARIG-HIVEARVLEAMGVDYID 105 (305)
T ss_dssp HHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHH-----CSSCEEEEECTT-CHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHh-----CCCCEEeccccc-chHHHHHHHHCCCCEEE
Confidence 34556668899998 442 22345555555432 256777776331 12333334444 89996
Q ss_pred EcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCH
Q 008319 336 VARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFP 415 (570)
Q Consensus 336 IgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP 415 (570)
+..+|.. +++ .+++. +++.|.++++... + ..+...++..|+|.+.++||+..| -.
T Consensus 106 -~~~~l~~----~~~----~~~i~-~~~~g~~v~~~~~-----------~---~~e~~~a~~~Gad~V~~~G~~g~g-~~ 160 (305)
T 2nv1_A 106 -ESEVLTP----ADE----EFHLN-KNEYTVPFVCGCR-----------D---LGEATRRIAEGASMLRTKGEPGTG-NI 160 (305)
T ss_dssp -ECTTSCC----SCS----SCCCC-GGGCSSCEEEEES-----------S---HHHHHHHHHTTCSEEEECCCTTSC-CT
T ss_pred -EeccCCH----HHH----HHHHH-HhccCCcEEEEeC-----------C---HHHHHHHHHCCCCEEEeccccCcc-ch
Confidence 4444422 221 12223 5567899887521 2 224556778999999999988777 45
Q ss_pred HHHHHHHHHHH
Q 008319 416 LKAVKVMHTVA 426 (570)
Q Consensus 416 ~eaV~~m~~I~ 426 (570)
.+++...+.+.
T Consensus 161 ~~~~~h~rt~~ 171 (305)
T 2nv1_A 161 VEAVRHMRKVN 171 (305)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHhhhhhhh
Confidence 56666655543
No 124
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=68.38 E-value=15 Score=37.34 Aligned_cols=97 Identities=9% Similarity=0.126 Sum_probs=59.0
Q ss_pred HHhhhhhhcCCcEEEec------CCCChhHH-HHHHHHHHhcCCCceEEEeec---CcchhhhHHHHHHh-CCEEEEcCC
Q 008319 271 EDIKFGVDNQVDFYAVS------FVKDAKVV-HELKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S------fV~sa~dv-~~vr~~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDgImIgrG 339 (570)
+.+++-++.|+|++.+. +.=+.++- +-++..++..+.+++||+-+= |.++++.....-+. +|++++-+-
T Consensus 48 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 127 (314)
T 3qze_A 48 KLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTP 127 (314)
T ss_dssp HHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 44567789999998763 12233333 334445556677899999774 56666666666555 999998754
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
...- +.-..+.+..-..|.+.+.|+++.
T Consensus 128 ~y~~----~s~~~l~~~f~~va~a~~lPiilY 155 (314)
T 3qze_A 128 YYNK----PTQEGMYQHFRHIAEAVAIPQILY 155 (314)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHSCSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 4321 122233334444455569999985
No 125
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=68.26 E-value=35 Score=34.25 Aligned_cols=97 Identities=13% Similarity=0.151 Sum_probs=59.1
Q ss_pred HHhhhhhhcCCcEEEec-------CCCChhHHHHHHHHHHhcCC-CceEEEeec---CcchhhhHHHHHHh-CCEEEEcC
Q 008319 271 EDIKFGVDNQVDFYAVS-------FVKDAKVVHELKDYLKSCNA-DIHVIVKIE---SADSIPNLHSIISA-SDGAMVAR 338 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S-------fV~sa~dv~~vr~~l~~~~~-~i~IiaKIE---t~~gv~NldeIl~~-sDgImIgr 338 (570)
+.+++-++.|+|++.+. .....|..+-++...+..+. ++++|+-+= |.++++.....-+. +|++++-+
T Consensus 32 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 111 (301)
T 3m5v_A 32 RLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVA 111 (301)
T ss_dssp HHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 44567789999998764 11222333334445555667 899999873 55566655555555 89999875
Q ss_pred CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 339 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 339 GDLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
-.+.- +.-..+.+..-..|.+.+.|+++.
T Consensus 112 P~y~~----~s~~~l~~~f~~va~a~~lPiilY 140 (301)
T 3m5v_A 112 PYYNK----PTQQGLYEHYKAIAQSVDIPVLLY 140 (301)
T ss_dssp CCSSC----CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCCC----CCHHHHHHHHHHHHHhCCCCEEEE
Confidence 44321 122334444445555669999975
No 126
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=68.10 E-value=56 Score=31.05 Aligned_cols=133 Identities=17% Similarity=0.184 Sum_probs=70.6
Q ss_pred HHHhhhhhhcCCcEEEecC--CCChhHHHHHHHHHHhcCCC-ceEEE---------eecCc--------chhhhHHHHHH
Q 008319 270 WEDIKFGVDNQVDFYAVSF--VKDAKVVHELKDYLKSCNAD-IHVIV---------KIESA--------DSIPNLHSIIS 329 (570)
Q Consensus 270 ~~dI~~~~~~gvd~I~~Sf--V~sa~dv~~vr~~l~~~~~~-i~Iia---------KIEt~--------~gv~NldeIl~ 329 (570)
.++++.+++.|+|+|.+.- ..+++.+.++.+.+ +.+ +.+-. ++++. ..++.+.++.+
T Consensus 87 ~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~---~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~ 163 (252)
T 1ka9_F 87 LEDARKLLLSGADKVSVNSAAVRRPELIRELADHF---GAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVE 163 (252)
T ss_dssp HHHHHHHHHHTCSEEEECHHHHHCTHHHHHHHHHH---CGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEChHHHhCcHHHHHHHHHc---CCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHH
Confidence 4567777788999998863 34444454444433 322 22211 12221 22445556656
Q ss_pred h-CCEEEEcC-CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecc
Q 008319 330 A-SDGAMVAR-GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (570)
Q Consensus 330 ~-sDgImIgr-GDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (570)
. ++++++.. +-=+...|. ++ ...++ .++..+.|++. ....-+.. |+..+...|+|++++..
T Consensus 164 ~G~~~i~~~~~~~~g~~~g~-~~-~~i~~---l~~~~~ipvia---------~GGI~~~~---d~~~~~~~Gadgv~vgs 226 (252)
T 1ka9_F 164 LGAGEILLTSMDRDGTKEGY-DL-RLTRM---VAEAVGVPVIA---------SGGAGRME---HFLEAFQAGAEAALAAS 226 (252)
T ss_dssp HTCCEEEEEETTTTTTCSCC-CH-HHHHH---HHHHCSSCEEE---------ESCCCSHH---HHHHHHHTTCSEEEESH
T ss_pred cCCCEEEEecccCCCCcCCC-CH-HHHHH---HHHHcCCCEEE---------eCCCCCHH---HHHHHHHCCCHHHHHHH
Confidence 6 88888752 100122232 22 22222 33445899985 34444443 45555667999999865
Q ss_pred cccCCC-CHHHHHHHH
Q 008319 408 ETAHGK-FPLKAVKVM 422 (570)
Q Consensus 408 ETA~G~-yP~eaV~~m 422 (570)
---.+. -|.++.+.+
T Consensus 227 al~~~~~~~~~~~~~l 242 (252)
T 1ka9_F 227 VFHFGEIPIPKLKRYL 242 (252)
T ss_dssp HHHTTSSCHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHH
Confidence 444565 455665553
No 127
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=67.78 E-value=9.1 Score=37.18 Aligned_cols=144 Identities=15% Similarity=0.123 Sum_probs=84.1
Q ss_pred CCCChhhHHHh-hhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHH-------HHHHh-CCE
Q 008319 263 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLH-------SIISA-SDG 333 (570)
Q Consensus 263 p~lt~kD~~dI-~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~Nld-------eIl~~-sDg 333 (570)
|..|..|.+.+ ..+.++|++.|+++ +..+...++++. +.++.+.+-|=.|.|-.+.+ +-++. +|.
T Consensus 14 p~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v~~~~~~l~--~~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~~GAde 87 (220)
T 1ub3_A 14 PTATLEEVAKAAEEALEYGFYGLCIP----PSYVAWVRARYP--HAPFRLVTVVGFPLGYQEKEVKALEAALACARGADE 87 (220)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEECC----GGGHHHHHHHCT--TCSSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEC----HHHHHHHHHHhC--CCCceEEEEecCCCCCCchHHHHHHHHHHHHcCCCE
Confidence 56677776444 67888999999876 455666666664 44677877776666544333 32322 665
Q ss_pred EEE--cCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHH-HHHHhCccEEEeccccc
Q 008319 334 AMV--ARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIA-IAVREGADAVMLSGETA 410 (570)
Q Consensus 334 ImI--grGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~-nav~~G~D~vmLs~ETA 410 (570)
|-+ ..|.|- +=..+.+..-.+.+.+.|...+.|||+-|-. ++..|+.... -+...|+|.|=-|
T Consensus 88 vd~vinig~~~-~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~---------l~~e~i~~a~~ia~eaGADfVKTs---- 153 (220)
T 1ub3_A 88 VDMVLHLGRAK-AGDLDYLEAEVRAVREAVPQAVLKVILETGY---------FSPEEIARLAEAAIRGGADFLKTS---- 153 (220)
T ss_dssp EEEECCHHHHH-TTCHHHHHHHHHHHHHHSTTSEEEEECCGGG---------SCHHHHHHHHHHHHHHTCSEEECC----
T ss_pred EEecccchhhh-CCCHHHHHHHHHHHHHHHcCCCceEEEecCC---------CCHHHHHHHHHHHHHhCCCEEEeC----
Confidence 533 111110 0011234444455666665556667764433 3556655543 3567899998765
Q ss_pred CCCC----HHHHHHHHHHHH
Q 008319 411 HGKF----PLKAVKVMHTVA 426 (570)
Q Consensus 411 ~G~y----P~eaV~~m~~I~ 426 (570)
.|.. -++.|+.|++..
T Consensus 154 TGf~~~gat~~dv~~m~~~v 173 (220)
T 1ub3_A 154 TGFGPRGASLEDVALLVRVA 173 (220)
T ss_dssp CSSSSCCCCHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHhh
Confidence 3333 458999998774
No 128
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=67.44 E-value=62 Score=32.11 Aligned_cols=126 Identities=10% Similarity=-0.011 Sum_probs=66.5
Q ss_pred hhhH-HHhhhhhhcCCc-EEEecCC-----------CChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh---
Q 008319 267 DKDW-EDIKFGVDNQVD-FYAVSFV-----------KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--- 330 (570)
Q Consensus 267 ~kD~-~dI~~~~~~gvd-~I~~SfV-----------~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~--- 330 (570)
..|. +.++.+.+.|+| +|-+.|- .+.+.+.++-+.+.+. .+++++.||=.--..+++.++++.
T Consensus 105 ~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~-~~~Pv~vKi~~~~~~~~~~~~a~~~~~ 183 (311)
T 1jub_A 105 AAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTF-FTKPLGVKLPPYFDLVHFDIMAEILNQ 183 (311)
T ss_dssp HHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTT-CCSCEEEEECCCCSHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHh-cCCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 3444 444566688999 8888652 1333333333333322 257899998322122344444443
Q ss_pred --CCEEEEcCCC---cccC-------------C----CCCCHHHHHHHHHHHHHH-c--CCCEEEEccchhhhhcCCCcC
Q 008319 331 --SDGAMVARGD---LGAE-------------L----PIEDVPLLQEDIIRRCRS-M--QKPVIVATNMLESMIDHPTPT 385 (570)
Q Consensus 331 --sDgImIgrGD---Lg~e-------------i----g~~~v~~~qk~Ii~~c~~-~--gKPvivaTqmLeSM~~~~~Pt 385 (570)
+|+|.+.-.- +.++ . |....+.. -+.++..++ . ..|+|.. ...-+
T Consensus 184 ~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~-~~~i~~v~~~~~~~ipvi~~---------GGI~~ 253 (311)
T 1jub_A 184 FPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTA-LANVRAFYTRLKPEIQIIGT---------GGIET 253 (311)
T ss_dssp SCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHH-HHHHHHHHTTSCTTSEEEEE---------SSCCS
T ss_pred cCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHH-HHHHHHHHHhcCCCCCEEEE---------CCCCC
Confidence 7888774210 0011 0 11112222 344555544 4 6888864 33323
Q ss_pred hHHHhHHHHHHHhCccEEEec
Q 008319 386 RAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 386 rAEv~Dv~nav~~G~D~vmLs 406 (570)
..|+..++..|+|+|++.
T Consensus 254 ---~~da~~~l~~GAd~V~vg 271 (311)
T 1jub_A 254 ---GQDAFEHLLCGATMLQIG 271 (311)
T ss_dssp ---HHHHHHHHHHTCSEEEEC
T ss_pred ---HHHHHHHHHcCCCEEEEc
Confidence 346777888999999996
No 129
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=67.05 E-value=9.2 Score=41.44 Aligned_cols=50 Identities=20% Similarity=0.384 Sum_probs=42.9
Q ss_pred CceEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHH
Q 008319 100 KTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKE 149 (570)
Q Consensus 100 ~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~ 149 (570)
+-.+-+.+|...+..+.++.|+++|+++.=||++|+..+.+.++++.+|+
T Consensus 219 rL~v~aavG~~~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~ 268 (496)
T 4fxs_A 219 RLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRA 268 (496)
T ss_dssp CBCCEEECCSSSCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH
T ss_pred ceeeeeeeccccchHHHHHHHHhccCceEEeccccccchHHHHHHHHHHH
Confidence 45667788988889999999999999999999999988777777777765
No 130
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=66.55 E-value=19 Score=36.48 Aligned_cols=97 Identities=14% Similarity=0.086 Sum_probs=54.6
Q ss_pred HHhhhhhhcCCcEEEecC------CCCh-hHHHHHHHHHHhcCCCceEEEee--cCcchhhhHHHHHHh-CCEEEEcCCC
Q 008319 271 EDIKFGVDNQVDFYAVSF------VKDA-KVVHELKDYLKSCNADIHVIVKI--ESADSIPNLHSIISA-SDGAMVARGD 340 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~Sf------V~sa-~dv~~vr~~l~~~~~~i~IiaKI--Et~~gv~NldeIl~~-sDgImIgrGD 340 (570)
+.+++-++.|+|+|.+.= .=+. |..+-++...+..+.+++||+-+ -|.++++.....-+. +|++++-+-.
T Consensus 37 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A~~~Gadavlv~~P~ 116 (316)
T 3e96_A 37 ETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAAKAAGADAVMIHMPI 116 (316)
T ss_dssp HHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 445677899999986541 1122 22333444555667789999988 333333333333333 8999996433
Q ss_pred cccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 341 LGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 341 Lg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
.. .+.-..+.+..-..|.+.+.|+++.
T Consensus 117 y~----~~s~~~l~~~f~~va~a~~lPiilY 143 (316)
T 3e96_A 117 HP----YVTAGGVYAYFRDIIEALDFPSLVY 143 (316)
T ss_dssp CS----CCCHHHHHHHHHHHHHHHTSCEEEE
T ss_pred CC----CCCHHHHHHHHHHHHHhCCCCEEEE
Confidence 21 1122233334444444557999986
No 131
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=66.38 E-value=15 Score=36.64 Aligned_cols=146 Identities=18% Similarity=0.164 Sum_probs=84.4
Q ss_pred CCCChhhHHHh-hhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHH-------Hh-CCE
Q 008319 263 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSII-------SA-SDG 333 (570)
Q Consensus 263 p~lt~kD~~dI-~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl-------~~-sDg 333 (570)
|..|+.|.+.+ ..+.++|+..|+++ +..+...++.|+ +.+++|.+=|=.|.|-...+.-+ +. +|.
T Consensus 54 p~~t~~~I~~lc~eA~~~~~aaVCV~----p~~V~~a~~~L~--gs~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdE 127 (260)
T 3r12_A 54 PFATPDDIKKLCLEARENRFHGVCVN----PCYVKLAREELE--GTDVKVVTVVGFPLGANETRTKAHEAIFAVESGADE 127 (260)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEC----GGGHHHHHHHHT--TSCCEEEEEESTTTCCSCHHHHHHHHHHHHHHTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHhc--CCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 56678887554 67889999999886 667778888884 55678887776666654333222 11 454
Q ss_pred EEEcCCCcccCCCC---CCHHHHHHHHHHHHHHc-CCCEEEEccchhhhhcCCCcChHHHhHHHH-HHHhCccEEEeccc
Q 008319 334 AMVARGDLGAELPI---EDVPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSGE 408 (570)
Q Consensus 334 ImIgrGDLg~eig~---~~v~~~qk~Ii~~c~~~-gKPvivaTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vmLs~E 408 (570)
|=+ -+.+|. .+...+.++|-..+... |+|+=+ |||+- .-|..|+..... +...|+|.|=-|.-
T Consensus 128 IDm-----ViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKV---IlEt~----~Lt~eei~~A~~ia~eaGADfVKTSTG 195 (260)
T 3r12_A 128 IDM-----VINVGMLKAKEWEYVYEDIRSVVESVKGKVVKV---IIETC----YLDTEEKIAACVISKLAGAHFVKTSTG 195 (260)
T ss_dssp EEE-----ECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEE---ECCGG----GCCHHHHHHHHHHHHHTTCSEEECCCS
T ss_pred EEE-----EeehhhhccccHHHHHHHHHHHHHhcCCCcEEE---EEeCC----CCCHHHHHHHHHHHHHhCcCEEEcCCC
Confidence 422 122222 23334444433333332 445422 34442 335667655544 55679999877621
Q ss_pred ccCCCCHHHHHHHHHHHH
Q 008319 409 TAHGKFPLKAVKVMHTVA 426 (570)
Q Consensus 409 TA~G~yP~eaV~~m~~I~ 426 (570)
=..|.--++.|+.|++.+
T Consensus 196 f~~~GAT~edV~lm~~~v 213 (260)
T 3r12_A 196 FGTGGATAEDVHLMKWIV 213 (260)
T ss_dssp SSSCCCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHh
Confidence 112234568999999875
No 132
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=66.11 E-value=52 Score=33.65 Aligned_cols=131 Identities=13% Similarity=0.178 Sum_probs=67.5
Q ss_pred CCChhhHHHh--------hhhhhcCCcEEEecCC-------------CChh---------HH---HHHHHHH-HhcCCCc
Q 008319 264 SITDKDWEDI--------KFGVDNQVDFYAVSFV-------------KDAK---------VV---HELKDYL-KSCNADI 309 (570)
Q Consensus 264 ~lt~kD~~dI--------~~~~~~gvd~I~~SfV-------------~sa~---------dv---~~vr~~l-~~~~~~i 309 (570)
.||..|++.+ +.+.+.|+|+|=+-.. +... +. .++-+.+ +..+.+.
T Consensus 141 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~ 220 (349)
T 3hgj_A 141 PLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPREL 220 (349)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCc
Confidence 6888888777 3456789999865322 2111 11 1221222 2347778
Q ss_pred eEEEeecCcc------hhhhHHHHHH----h-CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHH-cCCCEEEEccchhh
Q 008319 310 HVIVKIESAD------SIPNLHSIIS----A-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRS-MQKPVIVATNMLES 377 (570)
Q Consensus 310 ~IiaKIEt~~------gv~NldeIl~----~-sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~-~gKPvivaTqmLeS 377 (570)
.|..||---+ .+++..++++ . +|.|-+.-|........+.-+..+-..++..++ .+.|++..
T Consensus 221 pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~------ 294 (349)
T 3hgj_A 221 PLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAV------ 294 (349)
T ss_dssp CEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEEC------
T ss_pred eEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEE------
Confidence 8888884321 1223333332 2 798888754432221111001112223333333 47898863
Q ss_pred hhcCCCcChHHHhHHHHHHHhC-ccEEEec
Q 008319 378 MIDHPTPTRAEVSDIAIAVREG-ADAVMLS 406 (570)
Q Consensus 378 M~~~~~PtrAEv~Dv~nav~~G-~D~vmLs 406 (570)
...-+. .+...++..| +|.|++.
T Consensus 295 ---Ggi~t~---e~a~~~l~~G~aD~V~iG 318 (349)
T 3hgj_A 295 ---GLITTP---EQAETLLQAGSADLVLLG 318 (349)
T ss_dssp ---SSCCCH---HHHHHHHHTTSCSEEEES
T ss_pred ---CCCCCH---HHHHHHHHCCCceEEEec
Confidence 222223 2344678888 9999985
No 133
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=66.04 E-value=34 Score=34.49 Aligned_cols=97 Identities=18% Similarity=0.146 Sum_probs=59.1
Q ss_pred HHhhhhhhcCCcEEEec------CCCChhH-HHHHHHHHHhcCCCceEEEee---cCcchhhhHHHHHHh-CCEEEEcCC
Q 008319 271 EDIKFGVDNQVDFYAVS------FVKDAKV-VHELKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 339 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S------fV~sa~d-v~~vr~~l~~~~~~i~IiaKI---Et~~gv~NldeIl~~-sDgImIgrG 339 (570)
+.+++-++.|+|+|.+. +.=+.++ .+-++...+..+.+++||+-+ -|.++++.....-+. +|++++-+-
T Consensus 40 ~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 119 (304)
T 3l21_A 40 RLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTP 119 (304)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 44567788999998764 1112233 333444555567789999987 345555555555555 899998754
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
.+.- +.-..+.+..-..|.+.+.|+++.
T Consensus 120 ~y~~----~s~~~l~~~f~~va~a~~lPiilY 147 (304)
T 3l21_A 120 YYSK----PPQRGLQAHFTAVADATELPMLLY 147 (304)
T ss_dssp CSSC----CCHHHHHHHHHHHHTSCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 3321 122334444555566669999975
No 134
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=65.88 E-value=53 Score=32.75 Aligned_cols=97 Identities=12% Similarity=0.041 Sum_probs=58.7
Q ss_pred HHhhhhhh-cCCcEEEec------CCCChhH-HHHHHHHHHhcCCCceEEEeec---CcchhhhHHHHHHh-CCEEEEcC
Q 008319 271 EDIKFGVD-NQVDFYAVS------FVKDAKV-VHELKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVAR 338 (570)
Q Consensus 271 ~dI~~~~~-~gvd~I~~S------fV~sa~d-v~~vr~~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDgImIgr 338 (570)
+.++|-++ .|+|++.+. +.-+.++ .+-++...+..+.+++||+-+= |.++++.....-+. +|++++-+
T Consensus 28 ~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 107 (293)
T 1f6k_A 28 QIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVT 107 (293)
T ss_dssp HHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 45567788 999998763 2233333 3334445555677899999884 46666666665555 89999865
Q ss_pred CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 339 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 339 GDLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
-.+.- +.-..+.+..-..|.+.+.|+++.
T Consensus 108 P~y~~----~~~~~l~~~f~~va~a~~lPiilY 136 (293)
T 1f6k_A 108 PFYYK----FSFPEIKHYYDTIIAETGSNMIVY 136 (293)
T ss_dssp CCSSC----CCHHHHHHHHHHHHHHHCCCEEEE
T ss_pred CCCCC----CCHHHHHHHHHHHHHhCCCCEEEE
Confidence 44311 122223333334455568999975
No 135
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=65.78 E-value=50 Score=31.73 Aligned_cols=100 Identities=20% Similarity=0.167 Sum_probs=63.9
Q ss_pred HHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEee-c------C----cchhhhHHHHHHh-----CCEE
Q 008319 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI-E------S----ADSIPNLHSIISA-----SDGA 334 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKI-E------t----~~gv~NldeIl~~-----sDgI 334 (570)
+.++.+.+.|+|+|-+....-.+++.++++.+++.|-.+..+.-- . . .++++.+...++. ++.|
T Consensus 42 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v 121 (287)
T 3kws_A 42 EKLDFMEKLGVVGFEPGGGGLAGRVNEIKQALNGRNIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGELGSTGV 121 (287)
T ss_dssp HHHHHHHHTTCCEEECBSTTCGGGHHHHHHHHTTSSCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHcCCCEEEecCCchHHHHHHHHHHHHHcCCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEE
Confidence 556788899999999887766788999999998777654333210 0 1 1244555555554 6678
Q ss_pred EEcCCCccc--CCC-----CCCHHHHHHHHHHHHHHcCCCEEE
Q 008319 335 MVARGDLGA--ELP-----IEDVPLLQEDIIRRCRSMQKPVIV 370 (570)
Q Consensus 335 mIgrGDLg~--eig-----~~~v~~~qk~Ii~~c~~~gKPviv 370 (570)
.+.+|.-.. ..| ++.+....+++...|.+.|..+.+
T Consensus 122 ~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l 164 (287)
T 3kws_A 122 IIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIF 164 (287)
T ss_dssp EECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred EEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 776653221 111 123455567888888899987664
No 136
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=65.13 E-value=35 Score=32.26 Aligned_cols=112 Identities=22% Similarity=0.229 Sum_probs=64.6
Q ss_pred HHHhhhhhhcCCcEEEec-----CCCC----hhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEEcCC
Q 008319 270 WEDIKFGVDNQVDFYAVS-----FVKD----AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARG 339 (570)
Q Consensus 270 ~~dI~~~~~~gvd~I~~S-----fV~s----a~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrG 339 (570)
.++++.+.+.|+|+|-+- |+.+ .+.++++++. .+..+.+..++..++ +.++...+. +|+|.+.-.
T Consensus 26 ~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~---~~~~~~v~l~vnd~~--~~v~~~~~~Gad~v~vh~~ 100 (230)
T 1rpx_A 26 GEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPI---TDLPLDVHLMIVEPD--QRVPDFIKAGADIVSVHCE 100 (230)
T ss_dssp HHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGG---CCSCEEEEEESSSHH--HHHHHHHHTTCSEEEEECS
T ss_pred HHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhc---cCCcEEEEEEecCHH--HHHHHHHHcCCCEEEEEec
Confidence 456677778899988774 5544 2333333332 234455666777643 456666666 899988521
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
... .+.. ...++.+++.|+.++++.. ...| .| ...++..++|.+++.
T Consensus 101 ~~~----~~~~----~~~~~~~~~~g~~ig~~~~-------p~t~--~e---~~~~~~~~~d~vl~~ 147 (230)
T 1rpx_A 101 QSS----TIHL----HRTINQIKSLGAKAGVVLN-------PGTP--LT---AIEYVLDAVDLVLIM 147 (230)
T ss_dssp TTT----CSCH----HHHHHHHHHTTSEEEEEEC-------TTCC--GG---GGTTTTTTCSEEEEE
T ss_pred Ccc----chhH----HHHHHHHHHcCCcEEEEeC-------CCCC--HH---HHHHHHhhCCEEEEE
Confidence 001 1232 4677778888999888621 1112 12 123345789988544
No 137
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=65.03 E-value=59 Score=29.98 Aligned_cols=124 Identities=10% Similarity=0.066 Sum_probs=69.2
Q ss_pred HHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEEcCCCcccCCCCCC
Q 008319 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIED 349 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrGDLg~eig~~~ 349 (570)
++++.+.+.|+|+| ++-.-..+ +-++..+. .+.+++-+-|++- +..-++. +|.+-+-++++. +
T Consensus 74 ~~~~~a~~~Gad~i-v~~~~~~~----~~~~~~~~--g~~vi~g~~t~~e---~~~a~~~Gad~vk~~~~~~~---g--- 137 (205)
T 1wa3_A 74 EQCRKAVESGAEFI-VSPHLDEE----ISQFCKEK--GVFYMPGVMTPTE---LVKAMKLGHTILKLFPGEVV---G--- 137 (205)
T ss_dssp HHHHHHHHHTCSEE-ECSSCCHH----HHHHHHHH--TCEEECEECSHHH---HHHHHHTTCCEEEETTHHHH---H---
T ss_pred HHHHHHHHcCCCEE-EcCCCCHH----HHHHHHHc--CCcEECCcCCHHH---HHHHHHcCCCEEEEcCcccc---C---
Confidence 45677778999999 55443433 23333333 4677775545432 2222333 788877543221 1
Q ss_pred HHHHHHHHHHHHHHc-CCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCC---HHHHHHHHHHH
Q 008319 350 VPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKF---PLKAVKVMHTV 425 (570)
Q Consensus 350 v~~~qk~Ii~~c~~~-gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~y---P~eaV~~m~~I 425 (570)
.+.+-+..... +.|++.+. ...+ .++..++..|+|++.+.+-... .. |.+.++.+.++
T Consensus 138 ----~~~~~~l~~~~~~~pvia~G--------GI~~-----~~~~~~~~~Ga~~v~vGs~i~~-~d~~~~~~~~~~~~~~ 199 (205)
T 1wa3_A 138 ----PQFVKAMKGPFPNVKFVPTG--------GVNL-----DNVCEWFKAGVLAVGVGSALVK-GTPDEVREKAKAFVEK 199 (205)
T ss_dssp ----HHHHHHHHTTCTTCEEEEBS--------SCCT-----TTHHHHHHHTCSCEEECHHHHC-SCHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHhCCCCcEEEcC--------CCCH-----HHHHHHHHCCCCEEEECccccC-CCHHHHHHHHHHHHHH
Confidence 11121222223 67877532 2222 2577888999999998654434 56 88888877776
Q ss_pred HHH
Q 008319 426 ALR 428 (570)
Q Consensus 426 ~~~ 428 (570)
+++
T Consensus 200 ~~~ 202 (205)
T 1wa3_A 200 IRG 202 (205)
T ss_dssp HHH
T ss_pred HHh
Confidence 653
No 138
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=64.92 E-value=61 Score=33.46 Aligned_cols=121 Identities=18% Similarity=0.182 Sum_probs=66.6
Q ss_pred CCChhhHHHh--------hhhhhcCCcEEEecC-------------CCChhH----------------HHHHHHHHHhcC
Q 008319 264 SITDKDWEDI--------KFGVDNQVDFYAVSF-------------VKDAKV----------------VHELKDYLKSCN 306 (570)
Q Consensus 264 ~lt~kD~~dI--------~~~~~~gvd~I~~Sf-------------V~sa~d----------------v~~vr~~l~~~~ 306 (570)
.||..|++.+ +.+.+.|+|+|=+-. .+...| ++.+|+.+ +
T Consensus 150 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~v---g 226 (365)
T 2gou_A 150 AMTKADIAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAI---G 226 (365)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHH---C
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHc---C
Confidence 5788777655 234678999997732 221111 33444444 4
Q ss_pred CCceEEEeecCcc---------hhhhHHHHHHh-----CCEEEEcCCCcccCCCCCCHHHHHHHHHHH-HHHcCCCEEEE
Q 008319 307 ADIHVIVKIESAD---------SIPNLHSIISA-----SDGAMVARGDLGAELPIEDVPLLQEDIIRR-CRSMQKPVIVA 371 (570)
Q Consensus 307 ~~i~IiaKIEt~~---------gv~NldeIl~~-----sDgImIgrGDLg~eig~~~v~~~qk~Ii~~-c~~~gKPviva 371 (570)
.+ .|..||-.-+ .++...++++. +|+|-+..+.+.-. +..+ ...++. .+..+.|||..
T Consensus 227 ~~-pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~---~~~~---~~~~~~i~~~~~iPvi~~ 299 (365)
T 2gou_A 227 AE-RVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDA---PDTP---VSFKRALREAYQGVLIYA 299 (365)
T ss_dssp GG-GEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBC---CCCC---HHHHHHHHHHCCSEEEEE
T ss_pred CC-cEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCC---CCcc---HHHHHHHHHHCCCcEEEe
Confidence 45 6888884311 23333333433 79998876644211 1111 123333 33457898864
Q ss_pred ccchhhhhcCCCcChHHHhHHHHHHHhC-ccEEEecc
Q 008319 372 TNMLESMIDHPTPTRAEVSDIAIAVREG-ADAVMLSG 407 (570)
Q Consensus 372 TqmLeSM~~~~~PtrAEv~Dv~nav~~G-~D~vmLs~ 407 (570)
. .. +. .+...++..| +|+|++.-
T Consensus 300 G---------gi-~~---~~a~~~l~~g~aD~V~igR 323 (365)
T 2gou_A 300 G---------RY-NA---EKAEQAINDGLADMIGFGR 323 (365)
T ss_dssp S---------SC-CH---HHHHHHHHTTSCSEEECCH
T ss_pred C---------CC-CH---HHHHHHHHCCCcceehhcH
Confidence 2 23 33 3456778888 99999853
No 139
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=64.64 E-value=29 Score=33.97 Aligned_cols=126 Identities=11% Similarity=0.070 Sum_probs=71.9
Q ss_pred hhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh----CCEEEEcCC---CcccCCCCC
Q 008319 276 GVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVARG---DLGAELPIE 348 (570)
Q Consensus 276 ~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~----sDgImIgrG---DLg~eig~~ 348 (570)
+...|+|+|=++ .+.-.+..+|+++ +.+..+-+-+ .+.+|+.++ +|.|.+++- +.--..+..
T Consensus 108 A~~~gAdGVHLg--~~dl~~~~~r~~~---~~~~~iG~S~------ht~~Ea~~A~~~GaDyI~vgpvf~T~tK~~~~~~ 176 (243)
T 3o63_A 108 ARAAGADVLHLG--QRDLPVNVARQIL---APDTLIGRST------HDPDQVAAAAAGDADYFCVGPCWPTPTKPGRAAP 176 (243)
T ss_dssp HHHHTCSEEEEC--TTSSCHHHHHHHS---CTTCEEEEEE------CSHHHHHHHHHSSCSEEEECCSSCCCC-----CC
T ss_pred HHHhCCCEEEec--CCcCCHHHHHHhh---CCCCEEEEeC------CCHHHHHHHhhCCCCEEEEcCccCCCCCCCcchh
Confidence 667799998777 2333345666655 3344444433 444554433 899999872 111000001
Q ss_pred CHHHHHHHHHHHHHH--cCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHH
Q 008319 349 DVPLLQEDIIRRCRS--MQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVA 426 (570)
Q Consensus 349 ~v~~~qk~Ii~~c~~--~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~ 426 (570)
.+ ...++ .+.. ..+|++.. ... +. .++..+...|+|++.+.+.-..-..|.++++.+.+.+
T Consensus 177 gl-~~l~~---~~~~~~~~iPvvAi---------GGI-~~---~ni~~~~~aGa~gvav~sai~~a~dp~~a~~~l~~~~ 239 (243)
T 3o63_A 177 GL-GLVRV---AAELGGDDKPWFAI---------GGI-NA---QRLPAVLDAGARRIVVVRAITSADDPRAAAEQLRSAL 239 (243)
T ss_dssp CH-HHHHH---HHTC---CCCEEEE---------SSC-CT---TTHHHHHHTTCCCEEESHHHHTCSSHHHHHHHHHHHH
T ss_pred hH-HHHHH---HHHhccCCCCEEEe---------cCC-CH---HHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHH
Confidence 11 11122 2222 37898753 222 22 2466778899999998766556678999999998877
Q ss_pred HHh
Q 008319 427 LRT 429 (570)
Q Consensus 427 ~~a 429 (570)
.++
T Consensus 240 ~~~ 242 (243)
T 3o63_A 240 TAA 242 (243)
T ss_dssp HTC
T ss_pred Hhc
Confidence 654
No 140
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=64.63 E-value=1.2e+02 Score=31.31 Aligned_cols=89 Identities=24% Similarity=0.223 Sum_probs=50.3
Q ss_pred CCceEEEeecCcchhhhHHHHHHh-----CCEEEEc-----CCCc-----ccCCC-C--CCH-HHHHHHHHHHHHHc--C
Q 008319 307 ADIHVIVKIESADSIPNLHSIISA-----SDGAMVA-----RGDL-----GAELP-I--EDV-PLLQEDIIRRCRSM--Q 365 (570)
Q Consensus 307 ~~i~IiaKIEt~~gv~NldeIl~~-----sDgImIg-----rGDL-----g~eig-~--~~v-~~~qk~Ii~~c~~~--g 365 (570)
.+++|++||=--...+++.+|++. +|||.+- |-++ +.+.| + +.+ +...+.+-+..+.. .
T Consensus 219 ~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ 298 (367)
T 3zwt_A 219 HRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGR 298 (367)
T ss_dssp GCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTC
T ss_pred CCceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCC
Confidence 468999999422222356666654 8999874 2111 11111 1 122 33333333334444 6
Q ss_pred CCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecc
Q 008319 366 KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (570)
Q Consensus 366 KPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (570)
.|+|.. ...-+ ..|+..++..|+|+||+..
T Consensus 299 ipvI~~---------GGI~s---~~da~~~l~~GAd~V~vgr 328 (367)
T 3zwt_A 299 VPIIGV---------GGVSS---GQDALEKIRAGASLVQLYT 328 (367)
T ss_dssp SCEEEE---------SSCCS---HHHHHHHHHHTCSEEEESH
T ss_pred ceEEEE---------CCCCC---HHHHHHHHHcCCCEEEECH
Confidence 898864 33333 3567788889999999963
No 141
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=64.42 E-value=20 Score=36.22 Aligned_cols=98 Identities=9% Similarity=0.062 Sum_probs=58.1
Q ss_pred HHhhhhhhcCCcEEEec------C-CCChhHHHHHHHHHHhcCCCceEEEee---cCcchhhhHHHHHHh-CCEEEEcCC
Q 008319 271 EDIKFGVDNQVDFYAVS------F-VKDAKVVHELKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 339 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S------f-V~sa~dv~~vr~~l~~~~~~i~IiaKI---Et~~gv~NldeIl~~-sDgImIgrG 339 (570)
+.++|-++.|+|++.+. + ....|..+-++...+..+.+++||+-+ -|.++++.....-+. +|++++-+-
T Consensus 39 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 118 (307)
T 3s5o_A 39 ENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTP 118 (307)
T ss_dssp HHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 34567788999998754 2 223333333445555667789999977 455566655555555 899998543
Q ss_pred Cc-ccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 340 DL-GAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 340 DL-g~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
.. .....-+.+.. ..-..+.+.+.|+++.
T Consensus 119 ~y~~~~~s~~~l~~---~f~~ia~a~~lPiilY 148 (307)
T 3s5o_A 119 CYYRGRMSSAALIH---HYTKVADLSPIPVVLY 148 (307)
T ss_dssp CTTGGGCCHHHHHH---HHHHHHHHCSSCEEEE
T ss_pred CcCCCCCCHHHHHH---HHHHHHhhcCCCEEEE
Confidence 32 11122223333 3344455678999975
No 142
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=64.41 E-value=32 Score=31.78 Aligned_cols=107 Identities=15% Similarity=0.189 Sum_probs=63.6
Q ss_pred ChhhHHHh-hhhhhcCCcEEEecCCC-Chh-HHHHHHHHHHhcCCCceEEE-eecCcchhhhHHHHHHh-CCEEEEcCCC
Q 008319 266 TDKDWEDI-KFGVDNQVDFYAVSFVK-DAK-VVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISA-SDGAMVARGD 340 (570)
Q Consensus 266 t~kD~~dI-~~~~~~gvd~I~~SfV~-sa~-dv~~vr~~l~~~~~~i~Iia-KIEt~~gv~NldeIl~~-sDgImIgrGD 340 (570)
+..+...+ +...+.|+++|-+.+-. .+. .+..+|+.+. .+..+-+ .+.|++ .+++..+. +|.| ++++-
T Consensus 20 ~~~~~~~~~~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~~---~~~~ig~~~v~~~~---~~~~a~~~Gad~i-v~~~~ 92 (205)
T 1wa3_A 20 SVEEAKEKALAVFEGGVHLIEITFTVPDADTVIKELSFLKE---KGAIIGAGTVTSVE---QCRKAVESGAEFI-VSPHL 92 (205)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHTHHHHH---TTCEEEEESCCSHH---HHHHHHHHTCSEE-ECSSC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHHCC---CCcEEEecccCCHH---HHHHHHHcCCCEE-EcCCC
Confidence 33444333 44557799999775432 222 2455665542 2344433 344443 33444444 8999 87652
Q ss_pred cccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 341 LGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 341 Lg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
+ ..+++.|++.|+|++.- ..|.. ++..+...|+|.+-+.
T Consensus 93 -------~------~~~~~~~~~~g~~vi~g-----------~~t~~---e~~~a~~~Gad~vk~~ 131 (205)
T 1wa3_A 93 -------D------EEISQFCKEKGVFYMPG-----------VMTPT---ELVKAMKLGHTILKLF 131 (205)
T ss_dssp -------C------HHHHHHHHHHTCEEECE-----------ECSHH---HHHHHHHTTCCEEEET
T ss_pred -------C------HHHHHHHHHcCCcEECC-----------cCCHH---HHHHHHHcCCCEEEEc
Confidence 1 46888999999999842 12333 4667899999998774
No 143
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=64.38 E-value=34 Score=34.66 Aligned_cols=97 Identities=7% Similarity=0.116 Sum_probs=58.5
Q ss_pred HHhhhhhhcCCcEEEec-------CCCChhHHHHHHHHHHhcCCCceEEEeec---CcchhhhHHHHHHh-CCEEEEcCC
Q 008319 271 EDIKFGVDNQVDFYAVS-------FVKDAKVVHELKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S-------fV~sa~dv~~vr~~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDgImIgrG 339 (570)
+.+++-++.|+|++.+. .....|..+-++...+..+.+++||+-+= |.++++.....-+. +|++++-+-
T Consensus 47 ~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P 126 (315)
T 3si9_A 47 NFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTP 126 (315)
T ss_dssp HHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 44567789999998643 22223333334445555677899999773 55666665555555 899998754
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
.+.- +.-..+.+..-..|.+.+.|+++.
T Consensus 127 ~y~~----~~~~~l~~~f~~va~a~~lPiilY 154 (315)
T 3si9_A 127 YYNR----PNQRGLYTHFSSIAKAISIPIIIY 154 (315)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHcCCCCEEEE
Confidence 3321 122233444444555669999975
No 144
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=64.06 E-value=32 Score=34.58 Aligned_cols=97 Identities=18% Similarity=0.149 Sum_probs=58.7
Q ss_pred HHhhhhhhcCCcEEEec------CCCChhH-HHHHHHHHHhcCCCceEEEeec---CcchhhhHHHHHHh-CCEEEEcCC
Q 008319 271 EDIKFGVDNQVDFYAVS------FVKDAKV-VHELKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S------fV~sa~d-v~~vr~~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDgImIgrG 339 (570)
+.++|-++.|+|+|.+. +.-+.++ .+-++...+..+.+++||+-+= |.++++.....-+. +|++++-+-
T Consensus 36 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 115 (303)
T 2wkj_A 36 RLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTP 115 (303)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCC
Confidence 44567789999998763 2223333 3334445555667899999884 46666666665555 999998654
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcC-CCEEEE
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSMQ-KPVIVA 371 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~g-KPviva 371 (570)
.+.- .+-+.+...-+.| |.+.. .|+++.
T Consensus 116 ~y~~-~s~~~l~~~f~~v---a~a~~~lPiilY 144 (303)
T 2wkj_A 116 FYYP-FSFEEHCDHYRAI---IDSADGLPMVVY 144 (303)
T ss_dssp CSSC-CCHHHHHHHHHHH---HHHHTTCCEEEE
T ss_pred CCCC-CCHHHHHHHHHHH---HHhCCCCCEEEE
Confidence 4321 1223344444444 44556 999975
No 145
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=63.85 E-value=63 Score=32.17 Aligned_cols=97 Identities=20% Similarity=0.173 Sum_probs=59.6
Q ss_pred HHhhhhhhcCCcEEEec------CCCCh-hHHHHHHHHHHhcCCCceEEEeec---CcchhhhHHHHHHh-CCEEEEcCC
Q 008319 271 EDIKFGVDNQVDFYAVS------FVKDA-KVVHELKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S------fV~sa-~dv~~vr~~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDgImIgrG 339 (570)
+.++|-++.|+|++.+. +.-+. |..+-++...+..+.+++||+-+= |.++++.....-+. +|++++-+-
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (294)
T 2ehh_A 25 NLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVP 104 (294)
T ss_dssp HHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 45567789999998763 22233 333334445555567899999874 46666666665555 899998654
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
.+.- +.-..+.+..-..|.+.+.|+++.
T Consensus 105 ~y~~----~s~~~l~~~f~~va~a~~lPiilY 132 (294)
T 2ehh_A 105 YYNK----PTQRGLYEHFKTVAQEVDIPIIIY 132 (294)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 4321 122333344445566678999975
No 146
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=62.99 E-value=26 Score=32.52 Aligned_cols=61 Identities=18% Similarity=0.277 Sum_probs=44.9
Q ss_pred eeecCCCEEEEEEec--CCC---CccEEEeccCCccc--ccccCCEEEEe--CCeeEEEEEEEeCCeEEE
Q 008319 179 IILKEGQEFNFTIKR--GVS---TEDTVSVNYDDFVN--DVEVGDILLVD--GGMMSLAVKSKTKDLVKC 239 (570)
Q Consensus 179 i~l~~G~~v~lt~~~--~~~---~~~~i~v~~~~l~~--~v~~Gd~I~iD--DG~i~l~V~~~~~~~i~~ 239 (570)
.-++.|+++.|+... .+| ......++.+.|.. .+++|+.+.+. +|.+..+|++++++.|+.
T Consensus 50 ~Gm~~Ge~~~v~ippe~aYG~~~~~~v~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~v~~~~V~v 119 (171)
T 2k8i_A 50 EGHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVVV 119 (171)
T ss_dssp TTCCTTCEEEEEEETTTSSCCCCTTSEEEEEGGGGTTSSCCCTTCEEEEEETTEEEEEEEEEECSSEEEE
T ss_pred cCCCCCCEEEEEECcHHhcCCCChhhEEEeeHHHCCcccCccCCcEEEEECCCCcEEEEEEEEcCCEEEE
Confidence 356899999998763 233 33455677667764 68999999997 677777899999887654
No 147
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=62.96 E-value=61 Score=32.61 Aligned_cols=122 Identities=13% Similarity=0.068 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHHhhcC
Q 008319 353 LQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESS 432 (570)
Q Consensus 353 ~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~ 432 (570)
.=.-+...|+..|.++.+.. |..+....+...-..|++.+...++ +. .-++++...+++.+-...
T Consensus 84 ~g~alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~---~~-~~~~~~~a~~l~~~~~~~ 148 (325)
T 3dwg_A 84 TGISLAMAARLKGYRLICVM-----------PENTSVERRQLLELYGAQIIFSAAE---GG-SNTAVATAKELAATNPSW 148 (325)
T ss_dssp HHHHHHHHHHHHTCEEEEEE-----------ESSSCHHHHHHHHHHTCEEEEECST---TT-HHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHHCCCEEEEECCC---CC-HHHHHHHHHHHHHhCCCe
Confidence 33466778899999988741 2222223355566789998887543 12 357777766665543322
Q ss_pred CCCCCCCCCcccCCCCChhH---HHHHHHHHHHhhcC-C-cEEEEcCChHHHHHHHhc----CCCCeEEEEeCCH
Q 008319 433 LPVSITPPTQFSAHKSHMGD---MFAFHSTTMANTLN-T-PIIVFTRTGSMAVILSHY----RPSSTIFAFTNQE 498 (570)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~---~ia~~av~~a~~~~-a-~Iiv~T~sG~tA~~ls~~----RP~~pIiavt~~~ 498 (570)
++..+ |. ++.. -....+.++.++++ . .||+.+-+|.++.-++++ .|.+.|+++.+..
T Consensus 149 ~~~~~-~~--------np~~~~~g~~t~~~Ei~~q~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~ 214 (325)
T 3dwg_A 149 VMLYQ-YG--------NPANTDSHYCGTGPELLADLPEITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEPRY 214 (325)
T ss_dssp BCCCT-TT--------CHHHHHHHHHTHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHSTTCEEEEEEEEC
T ss_pred EeCCC-CC--------CHHHHHHHHHHHHHHHHHhcCCCCEEEEecCchHHHHHHHHHHHHhCCCCEEEEEeeCC
Confidence 22111 11 1211 12233456777775 4 789999999887766654 8999999998754
No 148
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=62.76 E-value=44 Score=33.76 Aligned_cols=97 Identities=13% Similarity=0.117 Sum_probs=57.5
Q ss_pred HHhhhhhhcCCcEEEec------CCCCh-hHHHHHHHHHHhcCCCceEEEeec--CcchhhhHHHHHHh-CCEEEEcCCC
Q 008319 271 EDIKFGVDNQVDFYAVS------FVKDA-KVVHELKDYLKSCNADIHVIVKIE--SADSIPNLHSIISA-SDGAMVARGD 340 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S------fV~sa-~dv~~vr~~l~~~~~~i~IiaKIE--t~~gv~NldeIl~~-sDgImIgrGD 340 (570)
+.++|-++.|+|+|.+. +.=|. |..+-++...+..+.+++||+-+= |.++++.....-+. +|++++-+-.
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~st~~ai~la~~A~~~Gadavlv~~P~ 116 (314)
T 3d0c_A 37 DNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGYSVDTAIELGKSAIDSGADCVMIHQPV 116 (314)
T ss_dssp HHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCcCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 44467789999998653 12233 333334455555667899999874 44555555544444 8999996543
Q ss_pred cccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 341 LGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 341 Lg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
+.- +.-..+.+..-..|.+.+.|+++.
T Consensus 117 y~~----~s~~~l~~~f~~va~a~~lPiilY 143 (314)
T 3d0c_A 117 HPY----ITDAGAVEYYRNIIEALDAPSIIY 143 (314)
T ss_dssp CSC----CCHHHHHHHHHHHHHHSSSCEEEE
T ss_pred CCC----CCHHHHHHHHHHHHHhCCCCEEEE
Confidence 321 122233333344566678999985
No 149
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=62.57 E-value=42 Score=34.51 Aligned_cols=97 Identities=14% Similarity=0.031 Sum_probs=59.2
Q ss_pred HHhhhhhhcCCcEEEec------CCCChh-HHHHHHHHHHhcCCCceEEEeec---CcchhhhHHHHHHh-CCEEEEcCC
Q 008319 271 EDIKFGVDNQVDFYAVS------FVKDAK-VVHELKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S------fV~sa~-dv~~vr~~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDgImIgrG 339 (570)
+.+++-++.|+|+|.+. +.-+.+ ..+-++...+..+.+++||+-+= |.++++.....-+. +|++++-+-
T Consensus 56 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 135 (343)
T 2v9d_A 56 ALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINP 135 (343)
T ss_dssp HHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 44567789999998763 222333 33334445555567899999874 46666666665555 999998654
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
.+.- +.-..+.+..-..+.+.+.|+++.
T Consensus 136 ~Y~~----~s~~~l~~~f~~VA~a~~lPiilY 163 (343)
T 2v9d_A 136 YYWK----VSEANLIRYFEQVADSVTLPVMLY 163 (343)
T ss_dssp SSSC----CCHHHHHHHHHHHHHTCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 4321 122233333334456678999975
No 150
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=62.49 E-value=1.2e+02 Score=30.53 Aligned_cols=132 Identities=11% Similarity=0.122 Sum_probs=77.7
Q ss_pred hhhhhhcCCcEEEec-CCCChhH---HHHHHHHHHhcC-CCceEEEeecCcch---------hhhHHHHHHh--CCEEEE
Q 008319 273 IKFGVDNQVDFYAVS-FVKDAKV---VHELKDYLKSCN-ADIHVIVKIESADS---------IPNLHSIISA--SDGAMV 336 (570)
Q Consensus 273 I~~~~~~gvd~I~~S-fV~sa~d---v~~vr~~l~~~~-~~i~IiaKIEt~~g---------v~NldeIl~~--sDgImI 336 (570)
++.+++.|+|.|.+- |+.+..+ +.++++..+.+. ..+++|+ |++.| +...-.+... +|.|-.
T Consensus 131 ve~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~GlpvIi--e~~~G~~~~~d~e~i~~aariA~elGAD~VKt 208 (295)
T 3glc_A 131 MDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMA--VTGVGKDMVRDQRYFSLATRIAAEMGAQIIKT 208 (295)
T ss_dssp HHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTTCCEEE--EECC----CCSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcCCEEEE--ECCCCCccCCCHHHHHHHHHHHHHhCCCEEEe
Confidence 455678999987654 4444322 233334444332 2355554 55432 2222233333 788777
Q ss_pred cCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHH-HhHHHHHHHhCccEEEecccccCCCCH
Q 008319 337 ARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSGETAHGKFP 415 (570)
Q Consensus 337 grGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~ETA~G~yP 415 (570)
.. +-+. .+++++. ...||+++ -.+..+..+ ...+..++..|++++.....-..-..|
T Consensus 209 ~~-------t~e~----~~~vv~~---~~vPVv~~--------GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~dp 266 (295)
T 3glc_A 209 YY-------VEKG----FERIVAG---CPVPIVIA--------GGKKLPEREALEMCWQAIDQGASGVDMGRNIFQSDHP 266 (295)
T ss_dssp EC-------CTTT----HHHHHHT---CSSCEEEE--------CCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTSSSH
T ss_pred CC-------CHHH----HHHHHHh---CCCcEEEE--------ECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcCcCH
Confidence 52 1122 2444444 36898864 222222233 666789999999999987776777899
Q ss_pred HHHHHHHHHHHHH
Q 008319 416 LKAVKVMHTVALR 428 (570)
Q Consensus 416 ~eaV~~m~~I~~~ 428 (570)
.+.++.+..+..+
T Consensus 267 ~~~~~al~~ivh~ 279 (295)
T 3glc_A 267 VAMMKAVQAVVHH 279 (295)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC
Confidence 9999999998765
No 151
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=62.44 E-value=43 Score=33.90 Aligned_cols=97 Identities=14% Similarity=0.063 Sum_probs=59.0
Q ss_pred HHhhhhhhcCCcEEEec------CCCCh-hHHHHHHHHHHhcCCCceEEEeec---CcchhhhHHHHHHh-CCEEEEcCC
Q 008319 271 EDIKFGVDNQVDFYAVS------FVKDA-KVVHELKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S------fV~sa-~dv~~vr~~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDgImIgrG 339 (570)
+.+++-++.|+|+|.+. +.=+. |..+-++...+..+.+++||+-+= |.++++.....-+. +|++++-+-
T Consensus 49 ~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 128 (315)
T 3na8_A 49 RSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPI 128 (315)
T ss_dssp HHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 44467789999998654 11122 333334445555677899999874 55666666665555 899999754
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
.+.- +.-..+.+..-..+.+.+.|+++.
T Consensus 129 ~y~~----~s~~~l~~~f~~va~a~~lPiilY 156 (315)
T 3na8_A 129 SYWK----LNEAEVFQHYRAVGEAIGVPVMLY 156 (315)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhCCCcEEEE
Confidence 4321 122333444444555668999975
No 152
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=62.43 E-value=14 Score=38.56 Aligned_cols=48 Identities=21% Similarity=0.390 Sum_probs=37.9
Q ss_pred eEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHH
Q 008319 102 KIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKE 149 (570)
Q Consensus 102 KIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~ 149 (570)
.+-+.+|......+.++.++++|++++=||.+||..+.+.+.|+.+|+
T Consensus 98 ~vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~ 145 (366)
T 4fo4_A 98 RVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRA 145 (366)
T ss_dssp CCEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH
T ss_pred eEEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 344555655577999999999999999999999988776666666664
No 153
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=62.36 E-value=72 Score=32.00 Aligned_cols=97 Identities=16% Similarity=0.143 Sum_probs=59.2
Q ss_pred HHhhhhhhcCCcEEEec------CCCChh-HHHHHHHHHHhcCCCceEEEeec---CcchhhhHHHHHHh-CCEEEEcCC
Q 008319 271 EDIKFGVDNQVDFYAVS------FVKDAK-VVHELKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S------fV~sa~-dv~~vr~~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDgImIgrG 339 (570)
+.++|-++.|+|+|.+. +.-+.+ ..+-++...+..+.+++||+-+= |.++++.....-+. +|++++-+-
T Consensus 41 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P 120 (304)
T 3cpr_A 41 EVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTP 120 (304)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 44567788999998763 223333 33334445555667899999884 46666666665555 899998654
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
.+.- +.-..+.+..-..+.+.+.|+++.
T Consensus 121 ~y~~----~~~~~l~~~f~~ia~a~~lPiilY 148 (304)
T 3cpr_A 121 YYSK----PSQEGLLAHFGAIAAATEVPICLY 148 (304)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 3311 122233333334456678999975
No 154
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=62.31 E-value=85 Score=32.33 Aligned_cols=124 Identities=14% Similarity=0.117 Sum_probs=64.8
Q ss_pred CCChhhHHHh--------hhhhhcCCcEEEe-------------cCCCChhH------------HHHHHHHH-HhcCCCc
Q 008319 264 SITDKDWEDI--------KFGVDNQVDFYAV-------------SFVKDAKV------------VHELKDYL-KSCNADI 309 (570)
Q Consensus 264 ~lt~kD~~dI--------~~~~~~gvd~I~~-------------SfV~sa~d------------v~~vr~~l-~~~~~~i 309 (570)
.||..|++.+ +.+.+.|+|+|=+ |..+...| +.++-+.+ +..+.+
T Consensus 150 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~- 228 (364)
T 1vyr_A 150 ALELDEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSAD- 228 (364)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGG-
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCC-
Confidence 5777777555 3346789999977 33332222 12211222 223545
Q ss_pred eEEEeecCc---c-------hhhhHHHHHHh-----CCEEEEcCCCcccCCCCCCHHHHHHHHHH-HHHHcCCCEEEEcc
Q 008319 310 HVIVKIESA---D-------SIPNLHSIISA-----SDGAMVARGDLGAELPIEDVPLLQEDIIR-RCRSMQKPVIVATN 373 (570)
Q Consensus 310 ~IiaKIEt~---~-------gv~NldeIl~~-----sDgImIgrGDLg~eig~~~v~~~qk~Ii~-~c~~~gKPvivaTq 373 (570)
.|..||-.- . .++..-++++. +|.|-+..+..... +...+ ..++ ..+..+.||+....
T Consensus 229 ~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~-~~~~~-----~~~~~v~~~~~iPvi~~Gg 302 (364)
T 1vyr_A 229 RIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGG-KPYSE-----AFRQKVRERFHGVIIGAGA 302 (364)
T ss_dssp GEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBC-CCCCH-----HHHHHHHHHCCSEEEEESS
T ss_pred cEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCC-CcccH-----HHHHHHHHHCCCCEEEECC
Confidence 688887332 1 22233333332 78888876533211 11111 2233 23345889886422
Q ss_pred chhhhhcCCCcChHHHhHHHHHHHhC-ccEEEecc
Q 008319 374 MLESMIDHPTPTRAEVSDIAIAVREG-ADAVMLSG 407 (570)
Q Consensus 374 mLeSM~~~~~PtrAEv~Dv~nav~~G-~D~vmLs~ 407 (570)
. +. .+...++..| +|+|++.-
T Consensus 303 ---------i-t~---~~a~~~l~~g~aD~V~~gR 324 (364)
T 1vyr_A 303 ---------Y-TA---EKAEDLIGKGLIDAVAFGR 324 (364)
T ss_dssp ---------C-CH---HHHHHHHHTTSCSEEEESH
T ss_pred ---------c-CH---HHHHHHHHCCCccEEEECH
Confidence 2 33 3455678888 99999853
No 155
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=62.17 E-value=38 Score=33.73 Aligned_cols=117 Identities=15% Similarity=0.161 Sum_probs=67.8
Q ss_pred HhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHhCCEE-EE-cC-CCcccCCCCC
Q 008319 272 DIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGA-MV-AR-GDLGAELPIE 348 (570)
Q Consensus 272 dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDgI-mI-gr-GDLg~eig~~ 348 (570)
-++.+.+.|+|++.++=. ..++..++++++++.|-+...++-=. ...+.+..|++.++|. .. .. |=-|.. .
T Consensus 115 f~~~~~~aGvdgvii~Dl-p~ee~~~~~~~~~~~gl~~i~liaP~--t~~eri~~i~~~~~gfvY~vS~~GvTG~~---~ 188 (267)
T 3vnd_A 115 FYTKAQAAGVDSVLIADV-PVEESAPFSKAAKAHGIAPIFIAPPN--ADADTLKMVSEQGEGYTYLLSRAGVTGTE---S 188 (267)
T ss_dssp HHHHHHHHTCCEEEETTS-CGGGCHHHHHHHHHTTCEEECEECTT--CCHHHHHHHHHHCCSCEEESCCCCCC-------
T ss_pred HHHHHHHcCCCEEEeCCC-CHhhHHHHHHHHHHcCCeEEEEECCC--CCHHHHHHHHHhCCCcEEEEecCCCCCCc---c
Confidence 345556889999988844 33567778888888776532222122 2357999999998744 33 11 111211 1
Q ss_pred CHHHHHHHHHHHHHHc-CCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 349 DVPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 349 ~v~~~qk~Ii~~c~~~-gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
.++.-....++..++. ..|+++- ...-+. .++..++..|+|+++.-
T Consensus 189 ~~~~~~~~~v~~vr~~~~~pv~vG---------fGI~~~---e~~~~~~~~gADgvVVG 235 (267)
T 3vnd_A 189 KAGEPIENILTQLAEFNAPPPLLG---------FGIAEP---EQVRAAIKAGAAGAISG 235 (267)
T ss_dssp ----CHHHHHHHHHTTTCCCEEEC---------SSCCSH---HHHHHHHHTTCSEEEEC
T ss_pred CCcHHHHHHHHHHHHhcCCCEEEE---------CCcCCH---HHHHHHHHcCCCEEEEC
Confidence 2333345566666664 6798873 233222 23555789999999984
No 156
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=62.14 E-value=99 Score=32.99 Aligned_cols=88 Identities=16% Similarity=0.167 Sum_probs=49.9
Q ss_pred Cce-EEEeecCcchhhhHHHHHHh-----CCEEEEcCCCcc--------cCCC-CC--CHHHHHHHHHHHHHHc---CCC
Q 008319 308 DIH-VIVKIESADSIPNLHSIISA-----SDGAMVARGDLG--------AELP-IE--DVPLLQEDIIRRCRSM---QKP 367 (570)
Q Consensus 308 ~i~-IiaKIEt~~gv~NldeIl~~-----sDgImIgrGDLg--------~eig-~~--~v~~~qk~Ii~~c~~~---gKP 367 (570)
+.+ |+.||=--...+++.+|++. +|||.+.-+=.. .+.+ +. .+....-+++...+++ ..|
T Consensus 296 ~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iP 375 (443)
T 1tv5_A 296 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 375 (443)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCc
Confidence 566 89999432222355666654 899987643211 1111 11 1122233455555443 689
Q ss_pred EEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecc
Q 008319 368 VIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (570)
Q Consensus 368 vivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (570)
+|.. ...-+ ..|+..++..|+|+|++..
T Consensus 376 VIg~---------GGI~s---~~DA~e~l~aGAd~Vqigr 403 (443)
T 1tv5_A 376 IIAS---------GGIFS---GLDALEKIEAGASVCQLYS 403 (443)
T ss_dssp EEEE---------SSCCS---HHHHHHHHHTTEEEEEESH
T ss_pred EEEE---------CCCCC---HHHHHHHHHcCCCEEEEcH
Confidence 8864 33333 4577888999999999963
No 157
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=62.00 E-value=55 Score=32.70 Aligned_cols=97 Identities=11% Similarity=0.091 Sum_probs=58.4
Q ss_pred HHhhhhhhcCCcEEEecCC------CChhH-HHHHHHHHHhcCCCceEEEeec---CcchhhhHHHHHHh-CCEEEEcCC
Q 008319 271 EDIKFGVDNQVDFYAVSFV------KDAKV-VHELKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV------~sa~d-v~~vr~~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDgImIgrG 339 (570)
+.+++-++.|+|++.+.=- =+.++ .+-++...+..+.+++||+-+= |.++++.....-+. +|++++-+-
T Consensus 32 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 111 (297)
T 3flu_A 32 DLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVP 111 (297)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 4456778999999876411 12222 2334444555667899999773 55666666555555 899998754
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
.+.- +.-..+.+..-..+.+.+.|+++.
T Consensus 112 ~y~~----~~~~~l~~~f~~va~a~~lPiilY 139 (297)
T 3flu_A 112 YYNK----PSQEGIYQHFKTIAEATSIPMIIY 139 (297)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhCCCCEEEE
Confidence 4321 122233444445555669999985
No 158
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=61.98 E-value=66 Score=32.78 Aligned_cols=97 Identities=8% Similarity=0.006 Sum_probs=59.3
Q ss_pred HHhhhhhhcCCcEEEec------CCCCh-hHHHHHHHHHHhcCCCceEEEeec---CcchhhhHHHHHHh-CCEEEEcCC
Q 008319 271 EDIKFGVDNQVDFYAVS------FVKDA-KVVHELKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S------fV~sa-~dv~~vr~~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDgImIgrG 339 (570)
+.++|-++.|+|+|.+. +.-+. |..+-++...+..+.+++||+-+= |.++++.....-+. +|++++.+-
T Consensus 59 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 138 (332)
T 2r8w_A 59 ALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPV 138 (332)
T ss_dssp HHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 44567789999998763 22233 333334445555667899999874 46666666665555 999999754
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
.+.- +.-..+.+..-..|.+.+.|+++.
T Consensus 139 ~Y~~----~s~~~l~~~f~~VA~a~~lPiilY 166 (332)
T 2r8w_A 139 SYTP----LTQEEAYHHFAAVAGATALPLAIY 166 (332)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 4321 122233333334455678999974
No 159
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=61.92 E-value=23 Score=35.94 Aligned_cols=98 Identities=8% Similarity=0.105 Sum_probs=58.3
Q ss_pred HHhhhhhhcCCcEEEecC-------CCChhHHHHHHHHHHhcCCCceEEEee---cCcchhhhHHHHHHh-CCEEEEcCC
Q 008319 271 EDIKFGVDNQVDFYAVSF-------VKDAKVVHELKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 339 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~Sf-------V~sa~dv~~vr~~l~~~~~~i~IiaKI---Et~~gv~NldeIl~~-sDgImIgrG 339 (570)
+.++|-++.|+|+|.+.= ....|..+-++...+..+.+++||+-+ -|.++++.....-+. +|++++-+-
T Consensus 36 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 115 (318)
T 3qfe_A 36 RYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPP 115 (318)
T ss_dssp HHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 445677899999987641 222333333444555667789999977 345566655555555 899999754
Q ss_pred Cc-ccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 340 DL-GAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 340 DL-g~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
.. .-.. .-..+.+..-..+.+.+.|+++.
T Consensus 116 ~y~~kp~---~~~~l~~~f~~ia~a~~lPiilY 145 (318)
T 3qfe_A 116 AYFGKAT---TPPVIKSFFDDVSCQSPLPVVIY 145 (318)
T ss_dssp CC---CC---CHHHHHHHHHHHHHHCSSCEEEE
T ss_pred cccCCCC---CHHHHHHHHHHHHhhCCCCEEEE
Confidence 22 1111 12233344444555668999974
No 160
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=61.68 E-value=85 Score=28.95 Aligned_cols=113 Identities=18% Similarity=0.185 Sum_probs=65.6
Q ss_pred HHHhhhhhhcCCcEEEec--C-C-CChhHHHHHHHHHHhcCCCceEEEeecCcchhhh-HHHHHHh-CCEEEEcCCCccc
Q 008319 270 WEDIKFGVDNQVDFYAVS--F-V-KDAKVVHELKDYLKSCNADIHVIVKIESADSIPN-LHSIISA-SDGAMVARGDLGA 343 (570)
Q Consensus 270 ~~dI~~~~~~gvd~I~~S--f-V-~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~N-ldeIl~~-sDgImIgrGDLg~ 343 (570)
.+.++.. ..|+|+|-+. | . ...+.++++|+. ..+.++.+-.=...+.+. +++..+. +|++.+. ++.
T Consensus 16 ~~~~~~~-~~~~diie~G~p~~~~~g~~~i~~ir~~----~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~--~~~- 87 (211)
T 3f4w_A 16 MVFMDKV-VDDVDIIEVGTPFLIREGVNAIKAIKEK----YPHKEVLADAKIMDGGHFESQLLFDAGADYVTVL--GVT- 87 (211)
T ss_dssp HHHHHHH-GGGCSEEEECHHHHHHHTTHHHHHHHHH----CTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEE--TTS-
T ss_pred HHHHHHh-hcCccEEEeCcHHHHhccHHHHHHHHHh----CCCCEEEEEEEeccchHHHHHHHHhcCCCEEEEe--CCC-
Confidence 3444433 4689997654 3 1 233444455443 234566553333345555 6676666 8999994 332
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 344 ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 344 eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
.....+.+++.|+++|+++++. | .++ .|. ...+..+...|+|.+.+.
T Consensus 88 ------~~~~~~~~~~~~~~~g~~~~v~------~-~~~-~t~--~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 88 ------DVLTIQSCIRAAKEAGKQVVVD------M-ICV-DDL--PARVRLLEEAGADMLAVH 134 (211)
T ss_dssp ------CHHHHHHHHHHHHHHTCEEEEE------C-TTC-SSH--HHHHHHHHHHTCCEEEEE
T ss_pred ------ChhHHHHHHHHHHHcCCeEEEE------e-cCC-CCH--HHHHHHHHHcCCCEEEEc
Confidence 1234478899999999998863 1 111 122 233567788999998764
No 161
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=61.61 E-value=24 Score=35.24 Aligned_cols=96 Identities=10% Similarity=0.146 Sum_probs=57.5
Q ss_pred HHhhhhhhcCCcEEEecCCCCh-------hHH-HHHHHHHHhcCCCceEEEeec---CcchhhhHHHHHHh-CCEEEEcC
Q 008319 271 EDIKFGVDNQVDFYAVSFVKDA-------KVV-HELKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVAR 338 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~sa-------~dv-~~vr~~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDgImIgr 338 (570)
+.+++-++.|+|++.+.- .+. ++- +-++...+..+.+++||+-+= |.++++.....-+. +|++++-+
T Consensus 26 ~lv~~li~~Gv~gl~~~G-ttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 104 (291)
T 3tak_A 26 KLVEWHIEQGTNSIVAVG-TTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVT 104 (291)
T ss_dssp HHHHHHHHHTCCEEEESS-TTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHCCCCEEEECc-cccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 455677899999986542 222 222 233444555567899999773 55666655555555 89999875
Q ss_pred CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 339 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 339 GDLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
-.+.- +.-..+.+..-..+.+.+.|+++.
T Consensus 105 P~y~~----~~~~~l~~~f~~ia~a~~lPiilY 133 (291)
T 3tak_A 105 PYYNK----PTQEGLYQHYKAIAEAVELPLILY 133 (291)
T ss_dssp CCSSC----CCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 44321 122233344444455569999975
No 162
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=61.59 E-value=36 Score=33.05 Aligned_cols=110 Identities=15% Similarity=0.163 Sum_probs=66.7
Q ss_pred ChhhHHHh-hhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEEcCCCccc
Q 008319 266 TDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGA 343 (570)
Q Consensus 266 t~kD~~dI-~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrGDLg~ 343 (570)
+..+...+ +-.++.|++.|=++| +++.-...++..-++. .+..|-| -|..-.+..+..++. +|.|+ .|+
T Consensus 23 ~~~~a~~~a~al~~gGi~~iEvt~-~t~~a~~~I~~l~~~~-p~~~IGA--GTVlt~~~a~~ai~AGA~fiv-sP~---- 93 (217)
T 3lab_A 23 DLVHAIPMAKALVAGGVHLLEVTL-RTEAGLAAISAIKKAV-PEAIVGA--GTVCTADDFQKAIDAGAQFIV-SPG---- 93 (217)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEET-TSTTHHHHHHHHHHHC-TTSEEEE--ECCCSHHHHHHHHHHTCSEEE-ESS----
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeC-CCccHHHHHHHHHHHC-CCCeEee--ccccCHHHHHHHHHcCCCEEE-eCC----
Confidence 33444444 344577888888876 4455455554433333 3344433 355555566666655 66654 343
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCC------CEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecc
Q 008319 344 ELPIEDVPLLQEDIIRRCRSMQK------PVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (570)
Q Consensus 344 eig~~~v~~~qk~Ii~~c~~~gK------PvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (570)
.-.++++.|+++|. |++= .-+-.+++..|...|+|.+-+.-
T Consensus 94 ---------~~~evi~~~~~~~v~~~~~~~~~P--------------G~~TptE~~~A~~~Gad~vK~FP 140 (217)
T 3lab_A 94 ---------LTPELIEKAKQVKLDGQWQGVFLP--------------GVATASEVMIAAQAGITQLKCFP 140 (217)
T ss_dssp ---------CCHHHHHHHHHHHHHCSCCCEEEE--------------EECSHHHHHHHHHTTCCEEEETT
T ss_pred ---------CcHHHHHHHHHcCCCccCCCeEeC--------------CCCCHHHHHHHHHcCCCEEEECc
Confidence 23578899999999 8762 22224457889999999997753
No 163
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=61.50 E-value=32 Score=33.84 Aligned_cols=129 Identities=10% Similarity=0.056 Sum_probs=72.4
Q ss_pred HhhhhhhcCCcEEEecCC-CChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEEcCCCcccCCCCCC
Q 008319 272 DIKFGVDNQVDFYAVSFV-KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIED 349 (570)
Q Consensus 272 dI~~~~~~gvd~I~~SfV-~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrGDLg~eig~~~ 349 (570)
++..+...|+|+|.+.-. -+ ++++++-++....|.+ + ++|.. +.+.++..++. .|.|-+++-+|.. ++. +
T Consensus 120 qi~~a~~~GAD~VlL~~~~l~-~~l~~l~~~a~~lGl~--~--lvev~-~~~E~~~a~~~gad~IGvn~~~l~~-~~~-d 191 (254)
T 1vc4_A 120 MLEEARAFGASAALLIVALLG-ELTGAYLEEARRLGLE--A--LVEVH-TERELEIALEAGAEVLGINNRDLAT-LHI-N 191 (254)
T ss_dssp HHHHHHHTTCSEEEEEHHHHG-GGHHHHHHHHHHHTCE--E--EEEEC-SHHHHHHHHHHTCSEEEEESBCTTT-CCB-C
T ss_pred HHHHHHHcCCCEEEECccchH-HHHHHHHHHHHHCCCe--E--EEEEC-CHHHHHHHHHcCCCEEEEccccCcC-CCC-C
Confidence 466688899999877521 11 3444443333344533 3 34443 22333433443 7888888777642 221 1
Q ss_pred HHHHHHHHHHHHHHc--CCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHH
Q 008319 350 VPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVM 422 (570)
Q Consensus 350 v~~~qk~Ii~~c~~~--gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m 422 (570)
+ ..-+++....... +.|++. .+..-|.+ |+..+.. |+|+++.-.---.+..|.++++-|
T Consensus 192 l-~~~~~L~~~i~~~~~~~~vIA---------egGI~s~~---dv~~l~~-Ga~gvlVGsAl~~~~d~~~~~~~l 252 (254)
T 1vc4_A 192 L-ETAPRLGRLARKRGFGGVLVA---------ESGYSRKE---ELKALEG-LFDAVLIGTSLMRAPDLEAALREL 252 (254)
T ss_dssp T-THHHHHHHHHHHTTCCSEEEE---------ESCCCSHH---HHHTTTT-TCSEEEECHHHHTSSCHHHHHHHH
T ss_pred H-HHHHHHHHhCccccCCCeEEE---------EcCCCCHH---HHHHHHc-CCCEEEEeHHHcCCCCHHHHHHHH
Confidence 1 1223444444433 567663 44554544 5666677 999999865555678898888765
No 164
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=61.17 E-value=43 Score=32.40 Aligned_cols=40 Identities=13% Similarity=0.155 Sum_probs=30.1
Q ss_pred HHhhhhhhcCCcEEEecCCC----------ChhHHHHHHHHHHhcCCCce
Q 008319 271 EDIKFGVDNQVDFYAVSFVK----------DAKVVHELKDYLKSCNADIH 310 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~----------sa~dv~~vr~~l~~~~~~i~ 310 (570)
+.++.+.+.|+|+|-+.+-. +.+++.++++.+++.|-.+.
T Consensus 34 ~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~ 83 (295)
T 3cqj_A 34 ERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVP 83 (295)
T ss_dssp HHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEE
T ss_pred HHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEE
Confidence 45677788999999887543 45678889999988776544
No 165
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=60.95 E-value=67 Score=31.88 Aligned_cols=97 Identities=13% Similarity=0.142 Sum_probs=58.8
Q ss_pred HHhhhhhhcCCcEEEec------CCCCh-hHHHHHHHHHHhcCCCceEEEeec---CcchhhhHHHHHHh-CCEEEEcCC
Q 008319 271 EDIKFGVDNQVDFYAVS------FVKDA-KVVHELKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S------fV~sa-~dv~~vr~~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDgImIgrG 339 (570)
+.+++-++.|+|++.+. +.-+. |..+-++...+..+.+++||+-+= |.++++.....-+. +|++++-+-
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 104 (289)
T 2yxg_A 25 ENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITP 104 (289)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 44567789999998763 22233 333334445555567899999874 46666666665555 999998654
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
.+.- +.-..+.+..-..|.+.+.|+++.
T Consensus 105 ~y~~----~s~~~l~~~f~~ia~a~~lPiilY 132 (289)
T 2yxg_A 105 YYNK----PTQEGLRKHFGKVAESINLPIVLY 132 (289)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 4321 122233333344456678999975
No 166
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=60.73 E-value=17 Score=36.81 Aligned_cols=147 Identities=16% Similarity=0.135 Sum_probs=85.7
Q ss_pred CCCChhhHHHh-hhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHH-------HHHHh-CCE
Q 008319 263 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLH-------SIISA-SDG 333 (570)
Q Consensus 263 p~lt~kD~~dI-~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~Nld-------eIl~~-sDg 333 (570)
|..|+.|.+.+ ..+.++|+..|+++ +..+..+++.|. +.+++|.+=|=-|.|-...+ +-++. +|.
T Consensus 69 p~~T~~dI~~lc~eA~~~g~aaVCV~----P~~V~~a~~~L~--~s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdE 142 (288)
T 3oa3_A 69 LSATGSQIDVLCAEAKEYGFATVCVR----PDYVSRAVQYLQ--GTQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGASE 142 (288)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHHHHTT--TSSCEEEEEESTTTSCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHcC--CCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 66788887554 67889999999886 667888888884 44677776675555433332 22222 554
Q ss_pred EEEcCCCcccCCCC---CCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHH-HHHHhCccEEEecccc
Q 008319 334 AMVARGDLGAELPI---EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIA-IAVREGADAVMLSGET 409 (570)
Q Consensus 334 ImIgrGDLg~eig~---~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~-nav~~G~D~vmLs~ET 409 (570)
|=+ -+.++. .+...+.++|-......+.|+. --|||+- ..+..|+.... -+...|+|+|=-| |
T Consensus 143 IDm-----VINig~lk~g~~~~v~~eI~~V~~a~~~~~l--KVIlEt~----~Lt~eei~~A~~ia~eaGADfVKTS--T 209 (288)
T 3oa3_A 143 LDM-----VMNYPWLSEKRYTDVFQDIRAVRLAAKDAIL--KVILETS----QLTADEIIAGCVLSSLAGADYVKTS--T 209 (288)
T ss_dssp EEE-----ECCHHHHHTTCHHHHHHHHHHHHHHTTTSEE--EEECCGG----GCCHHHHHHHHHHHHHTTCSEEECC--C
T ss_pred EEE-----EeehhhhcCCcHHHHHHHHHHHHHHhcCCCc--eEEEECC----CCCHHHHHHHHHHHHHcCCCEEEcC--C
Confidence 421 122222 3444455554444444444421 1233332 23566655443 4567899998776 3
Q ss_pred cC--CCCHHHHHHHHHHHHHH
Q 008319 410 AH--GKFPLKAVKVMHTVALR 428 (570)
Q Consensus 410 A~--G~yP~eaV~~m~~I~~~ 428 (570)
-. |.--++.|+.|+++++.
T Consensus 210 Gf~~~GAT~edv~lmr~~v~~ 230 (288)
T 3oa3_A 210 GFNGPGASIENVSLMSAVCDS 230 (288)
T ss_dssp SSSSCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHH
Confidence 22 23456789999999864
No 167
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=60.50 E-value=85 Score=31.49 Aligned_cols=147 Identities=14% Similarity=0.116 Sum_probs=86.2
Q ss_pred CCCCChhhHHHhhhhhhcCCcEEEecCC-------------CChhHHH-HHHHHHHhcCCCceEEEeecCc------chh
Q 008319 262 LPSITDKDWEDIKFGVDNQVDFYAVSFV-------------KDAKVVH-ELKDYLKSCNADIHVIVKIESA------DSI 321 (570)
Q Consensus 262 lp~lt~kD~~dI~~~~~~gvd~I~~SfV-------------~sa~dv~-~vr~~l~~~~~~i~IiaKIEt~------~gv 321 (570)
+..+|-+|.---+.+-+.|+|.|.+..- -+-+++. ..+. +.+.-.+.++++=+|+- +++
T Consensus 31 i~m~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~a-V~r~~~~~~vvaD~pfgsY~s~~~a~ 109 (275)
T 3vav_A 31 IAMLTCYDASFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTAC-VARAQPRALIVADLPFGTYGTPADAF 109 (275)
T ss_dssp EEEEECCSHHHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHH-HHHTCCSSEEEEECCTTSCSSHHHHH
T ss_pred EEEEeCcCHHHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHH-HHhcCCCCCEEEecCCCCCCCHHHHH
Confidence 3445677877777777899999977621 0122222 2222 33444568999999983 567
Q ss_pred hhHHHHHHh-CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE---c-cchhhh---hcCC-CcChHH--Hh
Q 008319 322 PNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA---T-NMLESM---IDHP-TPTRAE--VS 390 (570)
Q Consensus 322 ~NldeIl~~-sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPviva---T-qmLeSM---~~~~-~PtrAE--v~ 390 (570)
+|...++++ +++|-+-=|. .+...|+...++|.|+.-- | |-...+ .... ...+++ +.
T Consensus 110 ~~a~rl~kaGa~aVklEdg~------------~~~~~i~~l~~~GIpv~gHlgltPq~~~~~gg~~vqgrt~~~a~~~i~ 177 (275)
T 3vav_A 110 ASAVKLMRAGAQMVKFEGGE------------WLAETVRFLVERAVPVCAHVGLTPQSVHAFGGFKVQGKTEAGAAQLLR 177 (275)
T ss_dssp HHHHHHHHTTCSEEEEECCG------------GGHHHHHHHHHTTCCEEEEEESCGGGHHHHC---CCCCSHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCch------------hHHHHHHHHHHCCCCEEEecCCCceEEeccCCeEEEcCCHHHHHHHHH
Confidence 777777776 8999985431 2345566667899998732 1 111111 1111 112233 66
Q ss_pred HHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHHhh
Q 008319 391 DIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (570)
Q Consensus 391 Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE 430 (570)
|.-.+...|+|+++|=+= |.+ .+..|+++..
T Consensus 178 rA~a~~eAGA~~ivlE~v------p~~---~a~~It~~l~ 208 (275)
T 3vav_A 178 DARAVEEAGAQLIVLEAV------PTL---VAAEVTRELS 208 (275)
T ss_dssp HHHHHHHHTCSEEEEESC------CHH---HHHHHHHHCS
T ss_pred HHHHHHHcCCCEEEecCC------CHH---HHHHHHHhCC
Confidence 666777789999888321 333 4566666554
No 168
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=60.26 E-value=60 Score=32.54 Aligned_cols=97 Identities=13% Similarity=0.112 Sum_probs=59.4
Q ss_pred HHhhhhhhcCCcEEEec------CCCCh-hHHHHHHHHHHhcCCCceEEEeec---CcchhhhHHHHHHh-CCEEEEcCC
Q 008319 271 EDIKFGVDNQVDFYAVS------FVKDA-KVVHELKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S------fV~sa-~dv~~vr~~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDgImIgrG 339 (570)
+.++|-++.|+|+|.+. +.-+. |..+-++...+..+.+++||+-+= |.++++.....-+. +|++++-+-
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 116 (301)
T 1xky_A 37 KLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAP 116 (301)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 44467789999998763 22233 333334445555667899999874 46666666666555 899998654
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
.+.- +.-..+.+..-..|.+.+.|+++.
T Consensus 117 ~y~~----~s~~~l~~~f~~va~a~~lPiilY 144 (301)
T 1xky_A 117 YYNK----PSQEGMYQHFKAIAESTPLPVMLY 144 (301)
T ss_dssp CSSC----CCHHHHHHHHHHHHHTCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 4321 122233334444566678999975
No 169
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=60.24 E-value=1.4e+02 Score=29.76 Aligned_cols=142 Identities=20% Similarity=0.251 Sum_probs=85.0
Q ss_pred ChhhHH-Hhhhhhh--cCCcEEEecCC-------CChhHHHHHHHHHHhcCCCceEEE-eecCcchhhhHHHHHHh-CCE
Q 008319 266 TDKDWE-DIKFGVD--NQVDFYAVSFV-------KDAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISA-SDG 333 (570)
Q Consensus 266 t~kD~~-dI~~~~~--~gvd~I~~SfV-------~sa~dv~~vr~~l~~~~~~i~Iia-KIEt~~gv~NldeIl~~-sDg 333 (570)
|.+|.- -.+.+.+ .|-+||=+--+ .+.....+..+.|. .....++. -..++.--+.++ +. .|.
T Consensus 85 ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~--~~Gf~Vlpy~~dd~~~akrl~---~~G~~a 159 (265)
T 1wv2_A 85 DAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLV--KDGFDVMVYTSDDPIIARQLA---EIGCIA 159 (265)
T ss_dssp SHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHH--TTTCEEEEEECSCHHHHHHHH---HSCCSE
T ss_pred CHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHH--HCCCEEEEEeCCCHHHHHHHH---HhCCCE
Confidence 555542 2234444 58888877765 22222222223333 23456664 555544333333 33 788
Q ss_pred EEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCC
Q 008319 334 AMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGK 413 (570)
Q Consensus 334 ImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~ 413 (570)
+|.-...-|...|+.+ +...+.|.+ ..+.|||+. ...-|. +|++.++..|+|+|++..--+.++
T Consensus 160 VmPlg~pIGsG~Gi~~-~~lI~~I~e---~~~vPVI~e---------GGI~TP---sDAa~AmeLGAdgVlVgSAI~~a~ 223 (265)
T 1wv2_A 160 VMPLAGLIGSGLGICN-PYNLRIILE---EAKVPVLVD---------AGVGTA---SDAAIAMELGCEAVLMNTAIAHAK 223 (265)
T ss_dssp EEECSSSTTCCCCCSC-HHHHHHHHH---HCSSCBEEE---------SCCCSH---HHHHHHHHHTCSEEEESHHHHTSS
T ss_pred EEeCCccCCCCCCcCC-HHHHHHHHh---cCCCCEEEe---------CCCCCH---HHHHHHHHcCCCEEEEChHHhCCC
Confidence 8873334455556655 444455554 468999974 333333 478899999999999986666789
Q ss_pred CHHHHHHHHHHHHHH
Q 008319 414 FPLKAVKVMHTVALR 428 (570)
Q Consensus 414 yP~eaV~~m~~I~~~ 428 (570)
.|.+-.+.|..-++.
T Consensus 224 dP~~ma~af~~Av~a 238 (265)
T 1wv2_A 224 DPVMMAEAMKHAIVA 238 (265)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 999888888776543
No 170
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=59.98 E-value=1.2e+02 Score=29.22 Aligned_cols=112 Identities=9% Similarity=0.034 Sum_probs=70.7
Q ss_pred CChhhHHHhhhh-hhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEee--cCc-------chhhhHHHHHHh-CCE
Q 008319 265 ITDKDWEDIKFG-VDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI--ESA-------DSIPNLHSIISA-SDG 333 (570)
Q Consensus 265 lt~kD~~dI~~~-~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKI--Et~-------~gv~NldeIl~~-sDg 333 (570)
-++.+...+..+ .+.|+.+|.+ .+.++++++|+.. +++|+..+ .-. .-++.+++..+. +|.
T Consensus 33 ~~~~~~~~~A~a~~~~Ga~~i~~---~~~~~i~~ir~~v-----~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~ 104 (229)
T 3q58_A 33 DKPEIVAAMAQAAASAGAVAVRI---EGIENLRTVRPHL-----SVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADI 104 (229)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEE---ESHHHHHHHGGGC-----CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSE
T ss_pred CCcchHHHHHHHHHHCCCcEEEE---CCHHHHHHHHHhc-----CCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCE
Confidence 345666666544 4679998876 4788888887643 56666532 100 123456776766 999
Q ss_pred EEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEe
Q 008319 334 AMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 405 (570)
Q Consensus 334 ImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL 405 (570)
|.+.-..+ .. + ...+++++.+++.|.+++.- ..|..| .-.+...|+|.+-.
T Consensus 105 I~l~~~~~---~~-p---~~l~~~i~~~~~~g~~v~~~-----------v~t~ee---a~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 105 IAFDASFR---SR-P---VDIDSLLTRIRLHGLLAMAD-----------CSTVNE---GISCHQKGIEFIGT 155 (229)
T ss_dssp EEEECCSS---CC-S---SCHHHHHHHHHHTTCEEEEE-----------CSSHHH---HHHHHHTTCSEEEC
T ss_pred EEECcccc---CC-h---HHHHHHHHHHHHCCCEEEEe-----------cCCHHH---HHHHHhCCCCEEEe
Confidence 88753321 11 1 24567888888899998863 223333 45778999999963
No 171
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=59.91 E-value=89 Score=29.16 Aligned_cols=132 Identities=17% Similarity=0.166 Sum_probs=66.1
Q ss_pred HHhhhhhhcCCcEEEecC--CCChhHHHHHHHHHHhcCCC-ceE-----------EEeecC------cchhhhHHHHHHh
Q 008319 271 EDIKFGVDNQVDFYAVSF--VKDAKVVHELKDYLKSCNAD-IHV-----------IVKIES------ADSIPNLHSIISA 330 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~Sf--V~sa~dv~~vr~~l~~~~~~-i~I-----------iaKIEt------~~gv~NldeIl~~ 330 (570)
++++.+++.|+|+|.+.. ..+++. +.++.+..+.+ +.+ .+++.. ...++.+..+.+.
T Consensus 90 ~~~~~~~~~Gad~V~i~~~~~~~~~~---~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~~ 166 (253)
T 1h5y_A 90 EDATTLFRAGADKVSVNTAAVRNPQL---VALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEEL 166 (253)
T ss_dssp HHHHHHHHHTCSEEEESHHHHHCTHH---HHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEChHHhhCcHH---HHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHhC
Confidence 455666778999998762 223333 33444333422 221 222211 1234445555555
Q ss_pred -CCEEEEcCCCcccC-CCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEeccc
Q 008319 331 -SDGAMVARGDLGAE-LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGE 408 (570)
Q Consensus 331 -sDgImIgrGDLg~e-ig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~E 408 (570)
+|.|.+..-+..-. .++ .+ ...+++. +..+.|++.. ...-+. .|+..+...|+|++++..-
T Consensus 167 G~d~i~~~~~~~~g~~~~~-~~-~~i~~l~---~~~~~pvia~---------GGi~~~---~~~~~~~~~Ga~~v~vgsa 229 (253)
T 1h5y_A 167 GAGEILLTSIDRDGTGLGY-DV-ELIRRVA---DSVRIPVIAS---------GGAGRV---EHFYEAAAAGADAVLAASL 229 (253)
T ss_dssp TCSEEEEEETTTTTTCSCC-CH-HHHHHHH---HHCSSCEEEE---------SCCCSH---HHHHHHHHTTCSEEEESHH
T ss_pred CCCEEEEecccCCCCcCcC-CH-HHHHHHH---HhcCCCEEEe---------CCCCCH---HHHHHHHHcCCcHHHHHHH
Confidence 89998753332111 121 21 2223333 3347898864 333232 4566667789999998643
Q ss_pred ccCCCC-HHHHHHHH
Q 008319 409 TAHGKF-PLKAVKVM 422 (570)
Q Consensus 409 TA~G~y-P~eaV~~m 422 (570)
--.+.. +.+..++|
T Consensus 230 l~~~~~~~~~~~~~l 244 (253)
T 1h5y_A 230 FHFRVLSIAQVKRYL 244 (253)
T ss_dssp HHTTSSCHHHHHHHH
T ss_pred HHcCCCCHHHHHHHH
Confidence 333333 44445544
No 172
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=59.82 E-value=90 Score=33.31 Aligned_cols=119 Identities=22% Similarity=0.245 Sum_probs=70.4
Q ss_pred HHHhhhhhhcCCcEEEecCC--CChhHHHHHHHHHHhcCCCceEEE-eecCcchhhhHHHHHHhCCEEEEcCCCccc---
Q 008319 270 WEDIKFGVDNQVDFYAVSFV--KDAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISASDGAMVARGDLGA--- 343 (570)
Q Consensus 270 ~~dI~~~~~~gvd~I~~SfV--~sa~dv~~vr~~l~~~~~~i~Iia-KIEt~~gv~NldeIl~~sDgImIgrGDLg~--- 343 (570)
.+.+.+..+.|+|.+.+.-. .+..-+..++. +...- ++++++ .|-++++...+. -+|+|.+|.|-=+.
T Consensus 230 ~~~a~~l~~~gvd~lvvdta~G~~~~~L~~I~~-l~~~~-~vpvi~k~v~~~~~a~~l~----G~d~v~vg~g~g~~~~~ 303 (486)
T 2cu0_A 230 IKRAIELDKAGVDVIVVDTAHAHNLKAIKSMKE-MRQKV-DADFIVGNIANPKAVDDLT----FADAVKVGIGPGSICTT 303 (486)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCCCHHHHHHHHH-HHHTC-CSEEEEEEECCHHHHTTCT----TSSEEEECSSCSTTBCH
T ss_pred HHHHHHHHHhcCCceEEEecCCcEeehhhHHHH-HHHHh-CCccccCCcCCHHHHHHhh----CCCeEEEeeeeccceee
Confidence 55566777899998766522 22233333333 33322 677776 466766655443 68999995433111
Q ss_pred ----CCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecc
Q 008319 344 ----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (570)
Q Consensus 344 ----eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (570)
..|.+.+ .....+-+.+.+.+.|||.+. ..-+ -.|++.|+..|+|++++..
T Consensus 304 r~~~~~g~~~~-~~l~~~~~~~~~~~vpVia~G---------Gi~~---~~di~kalalGA~~v~~g~ 358 (486)
T 2cu0_A 304 RIVAGVGVPQI-TAVAMVADRAQEYGLYVIADG---------GIRY---SGDIVKAIAAGADAVMLGN 358 (486)
T ss_dssp HHHTCCCCCHH-HHHHHHHHHHHHHTCEEEEES---------CCCS---HHHHHHHHHTTCSEEEEST
T ss_pred eEEeecCcchH-HHHHHHHHHHHHcCCcEEecC---------CCCC---HHHHHHHHHcCCCceeeCh
Confidence 1232322 334444555666689998642 2222 3578899999999999853
No 173
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=59.61 E-value=88 Score=30.72 Aligned_cols=153 Identities=18% Similarity=0.173 Sum_probs=84.8
Q ss_pred CCCccCCCCCChhhH-HHhhhhhhcCCcEEE--ecCCC---ChhHHHHHHHHHHhcCCCceEEEeecCcc--h-------
Q 008319 256 RGKSANLPSITDKDW-EDIKFGVDNQVDFYA--VSFVK---DAKVVHELKDYLKSCNADIHVIVKIESAD--S------- 320 (570)
Q Consensus 256 p~~~~~lp~lt~kD~-~dI~~~~~~gvd~I~--~SfV~---sa~dv~~vr~~l~~~~~~i~IiaKIEt~~--g------- 320 (570)
|-.++++..-|.+|. +.++.+...|+|.|= +=|.+ +.+++.++-..+.+.-.+.++|.-+=|.. |
T Consensus 20 PkIcvpl~~~t~~e~l~~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~~~~~~~ 99 (258)
T 4h3d_A 20 PKICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEKLISRD 99 (258)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCSCCCCHH
T ss_pred CEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCCEEEEEechhhCCCCCCCHH
Confidence 444445544454442 445556677888762 23334 44444443333444344677887764321 1
Q ss_pred --hhhHHHHHHh--CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHh-HHHHH
Q 008319 321 --IPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVS-DIAIA 395 (570)
Q Consensus 321 --v~NldeIl~~--sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~-Dv~na 395 (570)
++-+.+++.. +|.|=| |+.. -....++++..+++.|..+|.+-+- +..+|...|+. .+..+
T Consensus 100 ~~~~ll~~~~~~~~~d~iDv-------El~~--~~~~~~~l~~~a~~~~~kiI~S~Hd-----f~~TP~~~el~~~~~~~ 165 (258)
T 4h3d_A 100 YYTTLNKEISNTGLVDLIDV-------ELFM--GDEVIDEVVNFAHKKEVKVIISNHD-----FNKTPKKEEIVSRLCRM 165 (258)
T ss_dssp HHHHHHHHHHHTTCCSEEEE-------EGGG--CHHHHHHHHHHHHHTTCEEEEEEEE-----SSCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCchhhHH-------hhhc--cHHHHHHHHHHHHhCCCEEEEEEec-----CCCCCCHHHHHHHHHHH
Confidence 1112333322 454433 2222 1346778999999999999987542 34578887854 45677
Q ss_pred HHhCccEEEecccccCCCCHHHHHHHHHHH
Q 008319 396 VREGADAVMLSGETAHGKFPLKAVKVMHTV 425 (570)
Q Consensus 396 v~~G~D~vmLs~ETA~G~yP~eaV~~m~~I 425 (570)
...|+|.+=+. ..-+-+.++.+.|.-.
T Consensus 166 ~~~gaDIvKia---~~~~~~~D~l~Ll~~~ 192 (258)
T 4h3d_A 166 QELGADLPKIA---VMPQNEKDVLVLLEAT 192 (258)
T ss_dssp HHTTCSEEEEE---ECCSSHHHHHHHHHHH
T ss_pred HHhCCCEEEEE---EccCCHHHHHHHHHHH
Confidence 78899987663 1234456666665543
No 174
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=59.53 E-value=61 Score=32.41 Aligned_cols=97 Identities=9% Similarity=0.070 Sum_probs=59.2
Q ss_pred HHhhhhhhcCCcEEEec------CCCChh-HHHHHHHHHHhcCCCceEEEeec---CcchhhhHHHHHHh-CCEEEEcCC
Q 008319 271 EDIKFGVDNQVDFYAVS------FVKDAK-VVHELKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S------fV~sa~-dv~~vr~~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDgImIgrG 339 (570)
+.++|-++.|+|+|.+. +.-|.+ ..+-++...+..+.+++||+-+= |.++++.....-+. +|++++-+-
T Consensus 25 ~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (297)
T 2rfg_A 25 GLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAG 104 (297)
T ss_dssp HHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 44567789999998753 222333 33334445555566889999874 46666666665555 999999754
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
.+.- +.-..+.+..-..|.+.+.|+++.
T Consensus 105 ~y~~----~s~~~l~~~f~~va~a~~lPiilY 132 (297)
T 2rfg_A 105 YYNR----PSQEGLYQHFKMVHDAIDIPIIVY 132 (297)
T ss_dssp TTTC----CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 4321 122233333334455678999975
No 175
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=58.90 E-value=14 Score=38.40 Aligned_cols=45 Identities=27% Similarity=0.363 Sum_probs=35.7
Q ss_pred EEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHH
Q 008319 103 IVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKE 149 (570)
Q Consensus 103 Ii~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~ 149 (570)
+.+-+|... .+.++.++++|++++-||++||+.+.+.+.++.+|+
T Consensus 98 vga~ig~~~--~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~ 142 (361)
T 3khj_A 98 VGAAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKS 142 (361)
T ss_dssp CEEEECTTC--HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHH
T ss_pred EEEEeCCCH--HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHH
Confidence 445555543 899999999999999999999998777777766664
No 176
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=58.73 E-value=48 Score=31.47 Aligned_cols=132 Identities=11% Similarity=0.145 Sum_probs=66.4
Q ss_pred HHHhhhhhhcCCcEEEecC--CCChhHHHHHHHHHHhcCCCceEEEe-----ecCc-------chhhhHHHHHHh-CCEE
Q 008319 270 WEDIKFGVDNQVDFYAVSF--VKDAKVVHELKDYLKSCNADIHVIVK-----IESA-------DSIPNLHSIISA-SDGA 334 (570)
Q Consensus 270 ~~dI~~~~~~gvd~I~~Sf--V~sa~dv~~vr~~l~~~~~~i~IiaK-----IEt~-------~gv~NldeIl~~-sDgI 334 (570)
.++++.+++.|+|.|.+.. ..+++ .+.+.++..+..+.+-.. +++. ..++.+++..+. +|.|
T Consensus 87 ~~~~~~~l~~Gad~V~lg~~~l~~p~---~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~G~~~i 163 (244)
T 1vzw_A 87 DDTLAAALATGCTRVNLGTAALETPE---WVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEGCARY 163 (244)
T ss_dssp HHHHHHHHHTTCSEEEECHHHHHCHH---HHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHTTCCCE
T ss_pred HHHHHHHHHcCCCEEEECchHhhCHH---HHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhCCCCEE
Confidence 4557777889999988762 12333 344444444433322222 2322 334445555556 8877
Q ss_pred EEcCC--CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHh---CccEEEecccc
Q 008319 335 MVARG--DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE---GADAVMLSGET 409 (570)
Q Consensus 335 mIgrG--DLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~---G~D~vmLs~ET 409 (570)
++-.. |.. .-++ .+ ...+++ +...+.|++.. ...-+. .|+..+... |+|++++..--
T Consensus 164 ~~~~~~~~~~-~~g~-~~-~~~~~i---~~~~~ipvia~---------GGI~~~---~d~~~~~~~~~~Gadgv~vG~al 225 (244)
T 1vzw_A 164 VVTDIAKDGT-LQGP-NL-ELLKNV---CAATDRPVVAS---------GGVSSL---DDLRAIAGLVPAGVEGAIVGKAL 225 (244)
T ss_dssp EEEEC--------CC-CH-HHHHHH---HHTCSSCEEEE---------SCCCSH---HHHHHHHTTGGGTEEEEEECHHH
T ss_pred EEeccCcccc-cCCC-CH-HHHHHH---HHhcCCCEEEE---------CCCCCH---HHHHHHHhhccCCCceeeeeHHH
Confidence 76421 111 1121 22 222233 24458999863 344333 355566666 99999986433
Q ss_pred cCCCCH-HHHHHHH
Q 008319 410 AHGKFP-LKAVKVM 422 (570)
Q Consensus 410 A~G~yP-~eaV~~m 422 (570)
-.+.++ .++++.+
T Consensus 226 ~~~~~~~~~~~~~~ 239 (244)
T 1vzw_A 226 YAKAFTLEEALEAT 239 (244)
T ss_dssp HTTSSCHHHHHHHH
T ss_pred HcCCCCHHHHHHHh
Confidence 344433 4455543
No 177
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=58.73 E-value=78 Score=31.26 Aligned_cols=119 Identities=12% Similarity=0.079 Sum_probs=73.6
Q ss_pred HHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHHhhcCCCC
Q 008319 356 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPV 435 (570)
Q Consensus 356 ~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~~~~ 435 (570)
-+...|+..|.++.+.. |.......+...-..|++.+...++. . .-++.+...++..+ +..++.
T Consensus 76 a~A~~a~~~G~~~~i~~-----------p~~~~~~k~~~~~~~Ga~V~~~~~~~---~-~~~~~~~a~~l~~~-~~~~~~ 139 (304)
T 1ve1_A 76 GLAMIAASRGYRLILTM-----------PAQMSEERKRVLKAFGAELVLTDPER---R-MLAAREEALRLKEE-LGAFMP 139 (304)
T ss_dssp HHHHHHHHHTCEEEEEE-----------ETTCCHHHHHHHHHTTCEEEEECTTT---H-HHHHHHHHHHHHHH-HTCBCC
T ss_pred HHHHHHHHcCCcEEEEe-----------CCCCCHHHHHHHHHcCCEEEEECCCC---C-HHHHHHHHHHHHhc-CCCEeC
Confidence 46677889999988741 11111234555667799988875431 1 34677777777665 332221
Q ss_pred CCCCCCcccCCCCChhHHH---HHHHHHHHhhcC--C-cEEEEcCChHHHHHHHh----cCCCCeEEEEeCCHH
Q 008319 436 SITPPTQFSAHKSHMGDMF---AFHSTTMANTLN--T-PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQER 499 (570)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~i---a~~av~~a~~~~--a-~Iiv~T~sG~tA~~ls~----~RP~~pIiavt~~~~ 499 (570)
.+ |. ++.... ...+.++.++++ . .||+.+-+|.++.-+++ ..|...||++.+...
T Consensus 140 ~~-~~--------n~~~~~g~~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~ 204 (304)
T 1ve1_A 140 DQ-FK--------NPANVRAHYETTGPELYEALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAVEPARS 204 (304)
T ss_dssp CT-TT--------CHHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHTTCTTCEEEEEEEGGG
T ss_pred CC-CC--------ChhHHHHHHHHHHHHHHHHcCCCCCEEEEecCCchhHHHHHHHHHHhCCCCEEEEEecCCC
Confidence 11 11 222222 223457777775 4 79999999999877765 469999999998654
No 178
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=58.68 E-value=54 Score=32.68 Aligned_cols=116 Identities=11% Similarity=0.117 Sum_probs=67.9
Q ss_pred HhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCc-chhhhHHHHHHhCCEE-EE-cCCCcccCCCCC
Q 008319 272 DIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESA-DSIPNLHSIISASDGA-MV-ARGDLGAELPIE 348 (570)
Q Consensus 272 dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~-~gv~NldeIl~~sDgI-mI-grGDLg~eig~~ 348 (570)
-++.+.+.|+|++.++=.. .++..++++++++.|-+.. -.+ ++ ...+.+.+|.+.++|. .. .+-+ -.|..
T Consensus 117 f~~~~~~aGvdGvIipDlp-~ee~~~~~~~~~~~gl~~I--~lv-ap~t~~eri~~i~~~~~gfiY~vs~~G---vTG~~ 189 (271)
T 3nav_A 117 FYQRCQKAGVDSVLIADVP-TNESQPFVAAAEKFGIQPI--FIA-PPTASDETLRAVAQLGKGYTYLLSRAG---VTGAE 189 (271)
T ss_dssp HHHHHHHHTCCEEEETTSC-GGGCHHHHHHHHHTTCEEE--EEE-CTTCCHHHHHHHHHHCCSCEEECCCC---------
T ss_pred HHHHHHHCCCCEEEECCCC-HHHHHHHHHHHHHcCCeEE--EEE-CCCCCHHHHHHHHHHCCCeEEEEeccC---CCCcc
Confidence 3455668899998887442 3556677888887776532 222 22 2357899999887544 32 2211 01211
Q ss_pred -CHHHHHHHHHHHHHHc-CCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 349 -DVPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 349 -~v~~~qk~Ii~~c~~~-gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
.++.-....++..+++ ..|+++. ...-+. .++..++..|+|+++.-
T Consensus 190 ~~~~~~~~~~v~~vr~~~~~Pv~vG---------fGIst~---e~~~~~~~~gADgvIVG 237 (271)
T 3nav_A 190 TKANMPVHALLERLQQFDAPPALLG---------FGISEP---AQVKQAIEAGAAGAISG 237 (271)
T ss_dssp --CCHHHHHHHHHHHHTTCCCEEEC---------SSCCSH---HHHHHHHHTTCSEEEES
T ss_pred cCCchhHHHHHHHHHHhcCCCEEEE---------CCCCCH---HHHHHHHHcCCCEEEEC
Confidence 2233455666666665 6799873 222222 34556889999999984
No 179
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=58.60 E-value=80 Score=31.46 Aligned_cols=147 Identities=17% Similarity=0.212 Sum_probs=87.2
Q ss_pred CChhhH-HHhhhhhhcC-CcEEEecCCCChhHHHHHHHHHHhcCCCceEEEee----cCcchhhhHHHHHHh-----CCE
Q 008319 265 ITDKDW-EDIKFGVDNQ-VDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI----ESADSIPNLHSIISA-----SDG 333 (570)
Q Consensus 265 lt~kD~-~dI~~~~~~g-vd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKI----Et~~gv~NldeIl~~-----sDg 333 (570)
.++.++ +.++.+++.| +|+|-+-.-...+.+.++.+...+. +++||+-- .|+. .+.+.+++.. +|.
T Consensus 116 ~~~~~~~~ll~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~~--~~kvI~S~Hdf~~tP~-~~el~~~~~~~~~~GaDI 192 (276)
T 3o1n_A 116 LTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQH--NVAVIMSNHDFHKTPA-AEEIVQRLRKMQELGADI 192 (276)
T ss_dssp CCHHHHHHHHHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHHT--TCEEEEEEEESSCCCC-HHHHHHHHHHHHHTTCSE
T ss_pred CCHHHHHHHHHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHhC--CCEEEEEeecCCCCcC-HHHHHHHHHHHHHcCCCE
Confidence 355554 5667888999 9999888655555555555544443 45666632 3553 3444444433 687
Q ss_pred EEEcCCCcccCCCCCCHHHHHHHHHHHHHH-cCCCEEEEccchhhhhcCCCcChHHHhHHHHHHH-hCccEEEecccccC
Q 008319 334 AMVARGDLGAELPIEDVPLLQEDIIRRCRS-MQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVR-EGADAVMLSGETAH 411 (570)
Q Consensus 334 ImIgrGDLg~eig~~~v~~~qk~Ii~~c~~-~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~-~G~D~vmLs~ETA~ 411 (570)
+=|+. +.-..+++..+.+-..+.... .++|+|.- +|-.....+| +.+.+. --.....+...+|=
T Consensus 193 vKia~----~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~-----~MG~~G~~SR-----i~~~~~GS~vTf~~l~~~sAP 258 (276)
T 3o1n_A 193 PKIAV----MPQTKADVLTLLTATVEMQERYADRPIITM-----SMSKTGVISR-----LAGEVFGSAATFGAVKKASAP 258 (276)
T ss_dssp EEEEE----CCSSHHHHHHHHHHHHHHHHHTCCSCCEEE-----ECSGGGTHHH-----HCHHHHTCCEEECBSSCCSST
T ss_pred EEEEe----cCCChHHHHHHHHHHHHHHhcCCCCCEEEE-----ECCCchhhHH-----HHHHHhCCceEecCCCCCCCC
Confidence 77752 111223555555433333232 67898863 5666555555 666665 22333346778999
Q ss_pred CCCHHHHHHHHHHHHHH
Q 008319 412 GKFPLKAVKVMHTVALR 428 (570)
Q Consensus 412 G~yP~eaV~~m~~I~~~ 428 (570)
|..+++-++.+-++...
T Consensus 259 GQl~~~~l~~~l~~l~~ 275 (276)
T 3o1n_A 259 GAISVADLRTVLTILHQ 275 (276)
T ss_dssp TCCBHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhcc
Confidence 99999988887776654
No 180
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=58.46 E-value=97 Score=29.90 Aligned_cols=91 Identities=12% Similarity=0.104 Sum_probs=50.3
Q ss_pred hHHHhhhhhhcCCcEEEe--cCCC--------------------ChhHHHHHHHHHHhcCCCceEEEee-cCcchhhhHH
Q 008319 269 DWEDIKFGVDNQVDFYAV--SFVK--------------------DAKVVHELKDYLKSCNADIHVIVKI-ESADSIPNLH 325 (570)
Q Consensus 269 D~~dI~~~~~~gvd~I~~--SfV~--------------------sa~dv~~vr~~l~~~~~~i~IiaKI-Et~~gv~Nld 325 (570)
-.+.++...+.|+|+|-+ ||.. +.++..++-+.+++. .+++++.+. .++.-...++
T Consensus 34 ~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~-~~~Pv~~m~~~~~~~~~~~~ 112 (262)
T 1rd5_A 34 TAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE-LSCPVVLLSYYKPIMFRSLA 112 (262)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG-CSSCEEEECCSHHHHSCCTH
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCEEEEecCcHHHHHHHH
Confidence 345666677889998755 4431 222222222223332 356676664 2221111233
Q ss_pred HHHHh-CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEE
Q 008319 326 SIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 370 (570)
Q Consensus 326 eIl~~-sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPviv 370 (570)
...+. +||+.+. |+.. ++ ..+++..++++|.+.++
T Consensus 113 ~a~~aGadgv~v~--d~~~----~~----~~~~~~~~~~~g~~~i~ 148 (262)
T 1rd5_A 113 KMKEAGVHGLIVP--DLPY----VA----AHSLWSEAKNNNLELVL 148 (262)
T ss_dssp HHHHTTCCEEECT--TCBT----TT----HHHHHHHHHHTTCEECE
T ss_pred HHHHcCCCEEEEc--CCCh----hh----HHHHHHHHHHcCCceEE
Confidence 44555 8999984 6554 33 45777889999988665
No 181
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=58.33 E-value=14 Score=38.65 Aligned_cols=51 Identities=14% Similarity=0.235 Sum_probs=40.8
Q ss_pred CceEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHH
Q 008319 100 KTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEY 150 (570)
Q Consensus 100 ~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~ 150 (570)
+..+.+.+|+.....+.++.++++|++++=||++||+++...+.++.+|+.
T Consensus 141 ~~~~~~~i~~~~~~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~ 191 (404)
T 1eep_A 141 KLRVGAAVSIDIDTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTK 191 (404)
T ss_dssp CBCCEEEECSCTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH
T ss_pred CceEEEEeCCChhHHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHH
Confidence 345677788755667889999999999999999999987777777777753
No 182
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=57.92 E-value=1.4e+02 Score=29.10 Aligned_cols=125 Identities=18% Similarity=0.244 Sum_probs=64.3
Q ss_pred hhHHHhh-hhhh-cCCcEEEecCC------------CChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHH----H
Q 008319 268 KDWEDIK-FGVD-NQVDFYAVSFV------------KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSII----S 329 (570)
Q Consensus 268 kD~~dI~-~~~~-~gvd~I~~SfV------------~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl----~ 329 (570)
.+..... .+.+ .|+|+|-+.|- .+.+.+.++-+.+.+. .++++++|+= + ++.++.+++ +
T Consensus 111 ~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~-~~~pv~vk~~-~-~~~~~~~~a~~l~~ 187 (311)
T 1ep3_A 111 ADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAV-SKVPLYVKLS-P-NVTDIVPIAKAVEA 187 (311)
T ss_dssp HHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHH-CSSCEEEEEC-S-CSSCSHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHh-cCCCEEEEEC-C-ChHHHHHHHHHHHH
Confidence 4444443 3444 89999876542 2333333333334332 1477888873 1 223334433 2
Q ss_pred h-CCEEEEcCCCcccC-----------------CCCCCHHHHHHHHHHHHH-HcCCCEEEEccchhhhhcCCCcChHHHh
Q 008319 330 A-SDGAMVARGDLGAE-----------------LPIEDVPLLQEDIIRRCR-SMQKPVIVATNMLESMIDHPTPTRAEVS 390 (570)
Q Consensus 330 ~-sDgImIgrGDLg~e-----------------ig~~~v~~~qk~Ii~~c~-~~gKPvivaTqmLeSM~~~~~PtrAEv~ 390 (570)
. +|+|.+.-+..+.. -|....+ ..-..++..+ ....|+|.+ ...-+ ..
T Consensus 188 ~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~-~~~~~i~~i~~~~~ipvia~---------GGI~~---~~ 254 (311)
T 1ep3_A 188 AGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKP-VALKLIHQVAQDVDIPIIGM---------GGVAN---AQ 254 (311)
T ss_dssp TTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHH-HHHHHHHHHHTTCSSCEEEC---------SSCCS---HH
T ss_pred cCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchH-HHHHHHHHHHHhcCCCEEEE---------CCcCC---HH
Confidence 3 89999832111110 0111122 2234444444 348898863 23323 34
Q ss_pred HHHHHHHhCccEEEeccc
Q 008319 391 DIAIAVREGADAVMLSGE 408 (570)
Q Consensus 391 Dv~nav~~G~D~vmLs~E 408 (570)
|+..++..|+|++++..-
T Consensus 255 d~~~~l~~GAd~V~vg~~ 272 (311)
T 1ep3_A 255 DVLEMYMAGASAVAVGTA 272 (311)
T ss_dssp HHHHHHHHTCSEEEECTH
T ss_pred HHHHHHHcCCCEEEECHH
Confidence 677888899999998643
No 183
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=57.90 E-value=64 Score=30.14 Aligned_cols=127 Identities=17% Similarity=0.145 Sum_probs=68.5
Q ss_pred HHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcch----hhhHHHHHHh-----CCEEEEcCCCc
Q 008319 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADS----IPNLHSIISA-----SDGAMVARGDL 341 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~g----v~NldeIl~~-----sDgImIgrGDL 341 (570)
..++...+.|+|+|.+..--..+-++.++ +.+ .+.+.+..-+... .+.++.++.. .||+.+.+.
T Consensus 69 ~~v~~~~~~Gad~vtvh~~~g~~~i~~~~----~~~-gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~~-- 141 (208)
T 2czd_A 69 LIARKVFGAGADYVIVHTFVGRDSVMAVK----ELG-EIIMVVEMSHPGALEFINPLTDRFIEVANEIEPFGVIAPGT-- 141 (208)
T ss_dssp HHHHHHHHTTCSEEEEESTTCHHHHHHHH----TTS-EEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCCSEEECCCS--
T ss_pred HHHHHHHhcCCCEEEEeccCCHHHHHHHH----HhC-CcEEEEecCCcchhhHHHHHHHHHHHHHHHhCCcEEEECCC--
Confidence 34555668999999877554443333332 233 4555555432221 3344555443 677766532
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHcC-CCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHH
Q 008319 342 GAELPIEDVPLLQEDIIRRCRSMQ-KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVK 420 (570)
Q Consensus 342 g~eig~~~v~~~qk~Ii~~c~~~g-KPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~ 420 (570)
..+++ +++-+.+ + .++++. -...+. -.++..++..|+|.+....--....-|.++++
T Consensus 142 ----~~~~i----~~lr~~~---~~~~~iv~--------gGI~~~---g~~~~~~~~aGad~vvvGr~I~~a~dp~~~~~ 199 (208)
T 2czd_A 142 ----RPERI----GYIRDRL---KEGIKILA--------PGIGAQ---GGKAKDAVKAGADYIIVGRAIYNAPNPREAAK 199 (208)
T ss_dssp ----STHHH----HHHHHHS---CTTCEEEE--------CCCCSS---TTHHHHHHHHTCSEEEECHHHHTSSSHHHHHH
T ss_pred ----ChHHH----HHHHHhC---CCCeEEEE--------CCCCCC---CCCHHHHHHcCCCEEEEChHHhcCCCHHHHHH
Confidence 12233 2222222 3 355542 222332 22466778889999997644444456999998
Q ss_pred HHHHHH
Q 008319 421 VMHTVA 426 (570)
Q Consensus 421 ~m~~I~ 426 (570)
.+++.+
T Consensus 200 ~l~~~i 205 (208)
T 2czd_A 200 AIYDEI 205 (208)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887654
No 184
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=57.60 E-value=1.6e+02 Score=31.14 Aligned_cols=87 Identities=17% Similarity=0.158 Sum_probs=49.8
Q ss_pred Cce-EEEeecCcchhhhHHHHHHh-----CCEEEEcCC-----Cc---ccCCC-C---CCHHHHHHHHHHHHHHc--CCC
Q 008319 308 DIH-VIVKIESADSIPNLHSIISA-----SDGAMVARG-----DL---GAELP-I---EDVPLLQEDIIRRCRSM--QKP 367 (570)
Q Consensus 308 ~i~-IiaKIEt~~gv~NldeIl~~-----sDgImIgrG-----DL---g~eig-~---~~v~~~qk~Ii~~c~~~--gKP 367 (570)
+.+ |++||=--..-+++.+|++. +|||.+.-. |+ ..+.| + +..+...+.|-+..+.. ..|
T Consensus 268 ~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iP 347 (415)
T 3i65_A 268 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 347 (415)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCC
Confidence 566 89999432222356666665 899987621 11 11111 1 12333334444444444 488
Q ss_pred EEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 368 VIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 368 vivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
+|.. ...-+ ..|+..++..|+|+|++.
T Consensus 348 IIg~---------GGI~s---~eDa~e~l~aGAd~VqIg 374 (415)
T 3i65_A 348 IIAS---------GGIFS---GLDALEKIEAGASVCQLY 374 (415)
T ss_dssp EEEC---------SSCCS---HHHHHHHHHHTEEEEEES
T ss_pred EEEE---------CCCCC---HHHHHHHHHcCCCEEEEc
Confidence 8853 33333 457888899999999985
No 185
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=56.85 E-value=70 Score=32.12 Aligned_cols=97 Identities=12% Similarity=0.118 Sum_probs=58.8
Q ss_pred HHhhhhhhcCCcEEEec------CCCCh-hHHHHHHHHHHhcCCCceEEEeec---CcchhhhHHHHHHh-CCEEEEcCC
Q 008319 271 EDIKFGVDNQVDFYAVS------FVKDA-KVVHELKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S------fV~sa-~dv~~vr~~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDgImIgrG 339 (570)
+.+++-++.|+|++.+. +.-+. |..+-++...+..+.+++||+-+= |.++++.....-+. +|++++-+-
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P 116 (306)
T 1o5k_A 37 RLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTP 116 (306)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCC
Confidence 44567789999998763 22333 333334445555567899999874 46666666665555 899998654
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
.+.- +.-..+.+..-..|.+.+.|+++.
T Consensus 117 ~y~~----~s~~~l~~~f~~va~a~~lPiilY 144 (306)
T 1o5k_A 117 YYNK----PTQEGLYQHYKYISERTDLGIVVY 144 (306)
T ss_dssp CSSC----CCHHHHHHHHHHHHTTCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhCCCCEEEE
Confidence 4321 122233333334455668999975
No 186
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=56.68 E-value=83 Score=31.67 Aligned_cols=95 Identities=14% Similarity=0.100 Sum_probs=58.2
Q ss_pred HHhhhhhhcCCcEEEec-------CCCChhHHHHHHHHHHhcCCCceEEEee---cCcchhhhHHHHHHh-CCEEEEcCC
Q 008319 271 EDIKFGVDNQVDFYAVS-------FVKDAKVVHELKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 339 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S-------fV~sa~dv~~vr~~l~~~~~~i~IiaKI---Et~~gv~NldeIl~~-sDgImIgrG 339 (570)
+.++|-++.|+|+|.+. .....|..+-++..++.. .+++||+-+ -|.++++......+. +|++++-+-
T Consensus 33 ~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 111 (313)
T 3dz1_A 33 RLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-KSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPP 111 (313)
T ss_dssp HHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-CCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 44567889999998763 222233333345555666 689999987 455666655555555 899999765
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcC--CCEEEE
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSMQ--KPVIVA 371 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~g--KPviva 371 (570)
.. - +.-..+.+..-..|.+.+ .|+++.
T Consensus 112 ~~--~---~s~~~l~~~f~~va~a~~~~lPiilY 140 (313)
T 3dz1_A 112 PS--L---RTDEQITTYFRQATEAIGDDVPWVLQ 140 (313)
T ss_dssp TT--C---CSHHHHHHHHHHHHHHHCTTSCEEEE
T ss_pred CC--C---CCHHHHHHHHHHHHHhCCCCCcEEEE
Confidence 42 1 122333444444455566 999975
No 187
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=56.56 E-value=1.3e+02 Score=30.43 Aligned_cols=128 Identities=13% Similarity=0.123 Sum_probs=65.6
Q ss_pred CCChhhHHHh--------hhhhhcCCcEEEecC-------------CCCh------------hHHHHHHHHHHhcCCCce
Q 008319 264 SITDKDWEDI--------KFGVDNQVDFYAVSF-------------VKDA------------KVVHELKDYLKSCNADIH 310 (570)
Q Consensus 264 ~lt~kD~~dI--------~~~~~~gvd~I~~Sf-------------V~sa------------~dv~~vr~~l~~~~~~i~ 310 (570)
.||..|++++ +.+.+.|+|+|-+-. .+.. .-+.++-+.+.+.= +..
T Consensus 133 ~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~~p 211 (338)
T 1z41_A 133 EMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-DGP 211 (338)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-CCc
Confidence 5788886555 345678999985432 2111 11222222232222 677
Q ss_pred EEEeecCc------chhhhHHHHHHh-----CCEEEEcCCCcc-cCCCCCCHHHHHHHHHHH-HHHcCCCEEEEccchhh
Q 008319 311 VIVKIESA------DSIPNLHSIISA-----SDGAMVARGDLG-AELPIEDVPLLQEDIIRR-CRSMQKPVIVATNMLES 377 (570)
Q Consensus 311 IiaKIEt~------~gv~NldeIl~~-----sDgImIgrGDLg-~eig~~~v~~~qk~Ii~~-c~~~gKPvivaTqmLeS 377 (570)
|..||--- ...++..++++. +|.|-+.-|... ...+... ..+...++. .+..+.|++..
T Consensus 212 v~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~--~~~~~~~~~ir~~~~iPVi~~------ 283 (338)
T 1z41_A 212 LFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFP--GYQVSFAEKIREQADMATGAV------ 283 (338)
T ss_dssp EEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCT--TTTHHHHHHHHHHHCCEEEEC------
T ss_pred EEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCc--cchHHHHHHHHHHCCCCEEEE------
Confidence 88887321 112233333332 799988766432 1111111 111222222 23348898863
Q ss_pred hhcCCCcChHHHhHHHHHHHhC-ccEEEec
Q 008319 378 MIDHPTPTRAEVSDIAIAVREG-ADAVMLS 406 (570)
Q Consensus 378 M~~~~~PtrAEv~Dv~nav~~G-~D~vmLs 406 (570)
...-+. .+...++..| +|.|++.
T Consensus 284 ---Ggi~s~---~~a~~~l~~G~aD~V~iG 307 (338)
T 1z41_A 284 ---GMITDG---SMAEEILQNGRADLIFIG 307 (338)
T ss_dssp ---SSCCSH---HHHHHHHHTTSCSEEEEC
T ss_pred ---CCCCCH---HHHHHHHHcCCceEEeec
Confidence 233233 3456778888 9999985
No 188
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=56.55 E-value=15 Score=35.19 Aligned_cols=131 Identities=15% Similarity=0.206 Sum_probs=66.3
Q ss_pred hhhhhcCCcEEEecCCCC---hhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHhCCEEEEcCCCc-ccCCCC--
Q 008319 274 KFGVDNQVDFYAVSFVKD---AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDL-GAELPI-- 347 (570)
Q Consensus 274 ~~~~~~gvd~I~~SfV~s---a~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDgImIgrGDL-g~eig~-- 347 (570)
..+.+.|+|+|.+..-++ .+++.++.+...+.| +.++.-+-+.+-.+.+.++ -.+.|-+.+-++ | .|.
T Consensus 76 ~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~G--l~~iv~v~~~~e~~~~~~~--~~~~i~~~~~~~iG--tG~~~ 149 (219)
T 2h6r_A 76 EAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLG--LETIVCTNNINTSKAVAAL--SPDCIAVEPPELIG--TGIPV 149 (219)
T ss_dssp HHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHT--CEEEEEESSSHHHHHHTTT--CCSEEEECCCC----------
T ss_pred HHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCC--CeEEEEeCCchHHHHHHhC--CCCEEEEEeccccc--cCCCC
Confidence 445578999999987532 334444444444444 4444444332323333222 146777777776 2 221
Q ss_pred -CCHHH-HHHHHHHHHHHc--CCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHH
Q 008319 348 -EDVPL-LQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 423 (570)
Q Consensus 348 -~~v~~-~qk~Ii~~c~~~--gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~ 423 (570)
..-+. ++ .+.+..++. +.|++. ....-+. .++..+...|+|+++.-+---.-..|.+.++-|.
T Consensus 150 ~t~~~~~~~-~~~~~ir~~~~~~~ii~---------ggGI~~~---~~~~~~~~~gaDgvlVGsAi~~~~d~~~~~~~l~ 216 (219)
T 2h6r_A 150 SKANPEVVE-GTVRAVKEINKDVKVLC---------GAGISKG---EDVKAALDLGAEGVLLASGVVKAKNVEEAIRELI 216 (219)
T ss_dssp ------CSH-HHHHHHHHHCTTCEEEE---------CSSCCSH---HHHHHHHTTTCCCEEESHHHHTCSSHHHHHHHHC
T ss_pred ccCCHHHHH-HHHHHHHhccCCCeEEE---------EeCcCcH---HHHHHHhhCCCCEEEEcHHHhCcccHHHHHHHHH
Confidence 11111 22 333444443 567664 2333222 2445567789999998644445567877776653
No 189
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=56.40 E-value=64 Score=33.18 Aligned_cols=131 Identities=15% Similarity=0.119 Sum_probs=66.6
Q ss_pred CCChhhHHHh--------hhhhhcCCcEEEecCC-------------CChh---------HH---HHHHHHHH-hcCCCc
Q 008319 264 SITDKDWEDI--------KFGVDNQVDFYAVSFV-------------KDAK---------VV---HELKDYLK-SCNADI 309 (570)
Q Consensus 264 ~lt~kD~~dI--------~~~~~~gvd~I~~SfV-------------~sa~---------dv---~~vr~~l~-~~~~~i 309 (570)
.||..|++.+ +.+.+.|+|+|=+-.. +... +. .++-+.+. ..+.+.
T Consensus 147 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~ 226 (363)
T 3l5l_A 147 EMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENL 226 (363)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCc
Confidence 6888888777 3456789999865432 1111 11 22222222 236677
Q ss_pred eEEEeecC---cc-h---hhhHHHHHHh-----CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHH-HcCCCEEEEccchh
Q 008319 310 HVIVKIES---AD-S---IPNLHSIISA-----SDGAMVARGDLGAELPIEDVPLLQEDIIRRCR-SMQKPVIVATNMLE 376 (570)
Q Consensus 310 ~IiaKIEt---~~-g---v~NldeIl~~-----sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~-~~gKPvivaTqmLe 376 (570)
.|..||-- .+ | ++...++++. +|.|-+.-|...-....+.-+..+...++..+ ..+.|++...
T Consensus 227 pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~G---- 302 (363)
T 3l5l_A 227 PLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTSAW---- 302 (363)
T ss_dssp CEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEECS----
T ss_pred eEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEEeC----
Confidence 88888832 11 2 2333333332 78888875543221111000111122222222 3479988632
Q ss_pred hhhcCCCcChHHHhHHHHHHHhC-ccEEEec
Q 008319 377 SMIDHPTPTRAEVSDIAIAVREG-ADAVMLS 406 (570)
Q Consensus 377 SM~~~~~PtrAEv~Dv~nav~~G-~D~vmLs 406 (570)
..-+. .+...++..| +|.|++.
T Consensus 303 -----gI~s~---e~a~~~l~~G~aD~V~iG 325 (363)
T 3l5l_A 303 -----GFGTP---QLAEAALQANQLDLVSVG 325 (363)
T ss_dssp -----STTSH---HHHHHHHHTTSCSEEECC
T ss_pred -----CCCCH---HHHHHHHHCCCccEEEec
Confidence 22222 2344678888 9999985
No 190
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=56.17 E-value=72 Score=31.71 Aligned_cols=97 Identities=12% Similarity=0.117 Sum_probs=58.4
Q ss_pred HHhhhhhhcCCcEEEec------CCCCh-hHHHHHHHHHHhcCCCceEEEeec---CcchhhhHHHHHHh-CCEEEEcCC
Q 008319 271 EDIKFGVDNQVDFYAVS------FVKDA-KVVHELKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S------fV~sa-~dv~~vr~~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDgImIgrG 339 (570)
+.+++-++.|+|++.+. +.-+. |..+-++...+..+.+++||+-+= |.++++....--+. +|++++-+-
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (292)
T 2vc6_A 25 DLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSP 104 (292)
T ss_dssp HHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 44567789999998653 22233 333334445555566889999874 46666666655555 899998654
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
.+.- +.-..+.+..-..+.+.+.|+++.
T Consensus 105 ~y~~----~s~~~l~~~f~~ia~a~~lPiilY 132 (292)
T 2vc6_A 105 YYNK----PTQEGIYQHFKAIDAASTIPIIVY 132 (292)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhCCCCEEEE
Confidence 3321 122233333334456678999974
No 191
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=56.07 E-value=1e+02 Score=31.16 Aligned_cols=119 Identities=11% Similarity=0.108 Sum_probs=72.4
Q ss_pred HHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHHhhcCCC
Q 008319 355 EDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLP 434 (570)
Q Consensus 355 k~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~~~ 434 (570)
.-+...|+..|.++.+.. |.......+...-..|++.+...+ . .-++.+...++..+- ..++
T Consensus 101 ~alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~-----~-~~~~~~~a~~l~~~~-~~~~ 162 (342)
T 2gn0_A 101 QGVSLSCAMLGIDGKVVM-----------PKGAPKSKVAATCDYSAEVVLHGD-----N-FNDTIAKVSEIVETE-GRIF 162 (342)
T ss_dssp HHHHHHHHHHTCCEEEEE-----------CTTSCHHHHHHHHHHSCEEEECCS-----S-HHHHHHHHHHHHHHH-CCEE
T ss_pred HHHHHHHHHcCCCEEEEE-----------CCCCCHHHHHHHHHcCCEEEEECC-----C-HHHHHHHHHHHHHhc-CCEE
Confidence 356678889999988741 211222345566778999876532 2 346777777766542 2221
Q ss_pred CCCCCCCcccCCCCChhHHHHHHHHHHHhhcC-C-cEEEEcCChHHHHHHHh----cCCCCeEEEEeCCH
Q 008319 435 VSITPPTQFSAHKSHMGDMFAFHSTTMANTLN-T-PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQE 498 (570)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~-a-~Iiv~T~sG~tA~~ls~----~RP~~pIiavt~~~ 498 (570)
..+ |.+. ........-+.++.++++ . .||+.+-+|.++.-+++ ..|...|+++.+..
T Consensus 163 ~~~-~~n~------~~~~g~~t~~~Ei~~q~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~ 225 (342)
T 2gn0_A 163 IPP-YDDP------KVIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAIAIKSINPTIKVIGVQAEN 225 (342)
T ss_dssp CCS-SSSH------HHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEETT
T ss_pred eCC-CCCH------HHHHHHHHHHHHHHHHcCCCCEEEEecCCchHHHHHHHHHHHhCCCCeEEEEEeCC
Confidence 111 1110 111222233567777775 4 89999999999776665 46999999999863
No 192
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=55.71 E-value=1.1e+02 Score=29.26 Aligned_cols=116 Identities=17% Similarity=0.210 Sum_probs=70.7
Q ss_pred HHhhhhhhcCCcEEEe-----cCCCCh----hHHHHHHHHHHhcCCCceEE--EeecCcchhhhHHHHHHh-CCEEEEcC
Q 008319 271 EDIKFGVDNQVDFYAV-----SFVKDA----KVVHELKDYLKSCNADIHVI--VKIESADSIPNLHSIISA-SDGAMVAR 338 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~-----SfV~sa----~dv~~vr~~l~~~~~~i~Ii--aKIEt~~gv~NldeIl~~-sDgImIgr 338 (570)
++++...+.|+|++-+ .||.+- +-++++|++. +.+..+- -|+++++. -++...+. +|+|-+..
T Consensus 21 ~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~---~~~~~~dvhLmv~~p~~--~i~~~~~aGad~itvH~ 95 (228)
T 3ovp_A 21 AECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQL---GQDPFFDMHMMVSKPEQ--WVKPMAVAGANQYTFHL 95 (228)
T ss_dssp HHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHH---CSSSCEEEEEECSCGGG--GHHHHHHHTCSEEEEEG
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhh---CCCCcEEEEEEeCCHHH--HHHHHHHcCCCEEEEcc
Confidence 5556666789998887 787543 4455565543 2333333 36888864 57777777 99999852
Q ss_pred CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEe-cccccCCC
Q 008319 339 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML-SGETAHGK 413 (570)
Q Consensus 339 GDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL-s~ETA~G~ 413 (570)
|-+ +. ..+.++.++++|+.++++. ...+|- ..+. .+...+|.+++ |-+...|-
T Consensus 96 -----Ea~-~~----~~~~i~~i~~~G~k~gval-------~p~t~~-e~l~----~~l~~~D~Vl~msv~pGf~G 149 (228)
T 3ovp_A 96 -----EAT-EN----PGALIKDIRENGMKVGLAI-------KPGTSV-EYLA----PWANQIDMALVMTVEPGFGG 149 (228)
T ss_dssp -----GGC-SC----HHHHHHHHHHTTCEEEEEE-------CTTSCG-GGTG----GGGGGCSEEEEESSCTTTCS
T ss_pred -----CCc-hh----HHHHHHHHHHcCCCEEEEE-------cCCCCH-HHHH----HHhccCCeEEEeeecCCCCC
Confidence 211 12 3577888899999999872 222221 1122 34456888875 54555444
No 193
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=55.49 E-value=69 Score=31.86 Aligned_cols=138 Identities=14% Similarity=0.231 Sum_probs=70.4
Q ss_pred hHHHhhhhhhcCCcEE--EecC---CCChhHHHH-----------------HHHHHHhcCCCceEEEee-cC---cchhh
Q 008319 269 DWEDIKFGVDNQVDFY--AVSF---VKDAKVVHE-----------------LKDYLKSCNADIHVIVKI-ES---ADSIP 322 (570)
Q Consensus 269 D~~dI~~~~~~gvd~I--~~Sf---V~sa~dv~~-----------------vr~~l~~~~~~i~IiaKI-Et---~~gv~ 322 (570)
-.+.++...+.|+|+| ++|| +-+..-|++ +-+-+++.+.+++++.+. .+ .-|++
T Consensus 36 ~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~ 115 (271)
T 3nav_A 36 SLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVYARGID 115 (271)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHH
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHH
Confidence 3455555567899985 7788 112112221 111233333567777662 22 13566
Q ss_pred hHHHHH-Hh-CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCc
Q 008319 323 NLHSII-SA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGA 400 (570)
Q Consensus 323 NldeIl-~~-sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~ 400 (570)
++-+-+ ++ +||+++. ||. +++ .....+.|+++|...+.- -.|..+.. .+......+.
T Consensus 116 ~f~~~~~~aGvdGvIip--Dlp----~ee----~~~~~~~~~~~gl~~I~l--------vap~t~~e---ri~~i~~~~~ 174 (271)
T 3nav_A 116 DFYQRCQKAGVDSVLIA--DVP----TNE----SQPFVAAAEKFGIQPIFI--------APPTASDE---TLRAVAQLGK 174 (271)
T ss_dssp HHHHHHHHHTCCEEEET--TSC----GGG----CHHHHHHHHHTTCEEEEE--------ECTTCCHH---HHHHHHHHCC
T ss_pred HHHHHHHHCCCCEEEEC--CCC----HHH----HHHHHHHHHHcCCeEEEE--------ECCCCCHH---HHHHHHHHCC
Confidence 554433 33 8999994 554 444 567889999999875531 23332322 3444455566
Q ss_pred cEEEe---cccccC-CCCHHHHHHHHHHHHH
Q 008319 401 DAVML---SGETAH-GKFPLKAVKVMHTVAL 427 (570)
Q Consensus 401 D~vmL---s~ETA~-G~yP~eaV~~m~~I~~ 427 (570)
+.+.+ .|=|-. ...|.+..+.+.++-.
T Consensus 175 gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~ 205 (271)
T 3nav_A 175 GYTYLLSRAGVTGAETKANMPVHALLERLQQ 205 (271)
T ss_dssp SCEEECCCC--------CCHHHHHHHHHHHH
T ss_pred CeEEEEeccCCCCcccCCchhHHHHHHHHHH
Confidence 66665 222221 1345455555555543
No 194
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=55.48 E-value=26 Score=35.33 Aligned_cols=64 Identities=9% Similarity=0.053 Sum_probs=48.6
Q ss_pred HHHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcch--hhhHHHHHHh-CCEEEEcC
Q 008319 270 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADS--IPNLHSIISA-SDGAMVAR 338 (570)
Q Consensus 270 ~~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~g--v~NldeIl~~-sDgImIgr 338 (570)
.+.++.+++.|+|+|.+-.. +++++++..+.+...+.++++ |=--| .+|+.++.+. +|+|.+|.
T Consensus 204 ~eea~eal~aGaD~I~LDn~-~~~~~~~~v~~l~~~~~~v~i----eaSGGIt~~~i~~~a~tGVD~isvG~ 270 (284)
T 1qpo_A 204 LEQLDAVLPEKPELILLDNF-AVWQTQTAVQRRDSRAPTVML----ESSGGLSLQTAATYAETGVDYLAVGA 270 (284)
T ss_dssp HHHHHHHGGGCCSEEEEETC-CHHHHHHHHHHHHHHCTTCEE----EEESSCCTTTHHHHHHTTCSEEECGG
T ss_pred HHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCeEE----EEECCCCHHHHHHHHhcCCCEEEECH
Confidence 46667778899999999875 778888888888765445444 33334 4799999998 99999985
No 195
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=55.41 E-value=41 Score=33.78 Aligned_cols=97 Identities=9% Similarity=0.061 Sum_probs=59.8
Q ss_pred HHhhhhhhcCCcEEEec------C-CCChhHHHHHHHHHHhcCCCceEEEee---cCcchhhhHHHHHHh-CCEEEEcCC
Q 008319 271 EDIKFGVDNQVDFYAVS------F-VKDAKVVHELKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 339 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S------f-V~sa~dv~~vr~~l~~~~~~i~IiaKI---Et~~gv~NldeIl~~-sDgImIgrG 339 (570)
+.+++-++.|+|+|.+. + ....|..+-++...+..+.+++||+-+ -|.++++.....-+. +|++++-+-
T Consensus 29 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 108 (300)
T 3eb2_A 29 RLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILE 108 (300)
T ss_dssp HHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 44567789999998543 1 222233333444555567788888876 466777776666666 999998754
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
...- +.-..+.+..-..+.+.+.|+++.
T Consensus 109 ~y~~----~~~~~l~~~f~~va~a~~lPiilY 136 (300)
T 3eb2_A 109 AYFP----LKDAQIESYFRAIADAVEIPVVIY 136 (300)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHHCCCCEEEE
Confidence 4321 222334444555556678999985
No 196
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=55.31 E-value=1.3e+02 Score=30.41 Aligned_cols=142 Identities=15% Similarity=0.169 Sum_probs=83.2
Q ss_pred hhHHHhhhhhhcCCcEEEec-------CCCChhHHHHHHHHHHhcCCCceEEEeecCcch------------hhhHHHHH
Q 008319 268 KDWEDIKFGVDNQVDFYAVS-------FVKDAKVVHELKDYLKSCNADIHVIVKIESADS------------IPNLHSII 328 (570)
Q Consensus 268 kD~~dI~~~~~~gvd~I~~S-------fV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~g------------v~NldeIl 328 (570)
.+.+++..|.+.|+|.|=+- -..+..-+..++++ .++.|.++|.-..| .+.++...
T Consensus 47 ~s~~~a~~A~~gGAdRIELc~~l~~GGlTPS~g~i~~a~~~-----~~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~ 121 (287)
T 3iwp_A 47 DSVESAVNAERGGADRIELCSGLSEGGTTPSMGVLQVVKQS-----VQIPVFVMIRPRGGDFLYSDREIEVMKADIRLAK 121 (287)
T ss_dssp SSHHHHHHHHHHTCSEEEECBCGGGTCBCCCHHHHHHHHTT-----CCSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCEEEECCCCCCCCCCCCHHHHHHHHHh-----cCCCeEEEEecCCCCcccCHHHHHHHHHHHHHHH
Confidence 45677778888999987543 11245555555543 35899999988777 24566666
Q ss_pred Hh-CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecc
Q 008319 329 SA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (570)
Q Consensus 329 ~~-sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (570)
+. +|||.+|- |.-+ +--++. ..+++++.+. +.++-+- +.+--.++..+ .+-..+..|+|-|+.||
T Consensus 122 ~~GAdGvVfG~--L~~d-g~iD~~-~~~~Li~~a~--~l~vTFH------RAFD~~~d~~~--Ale~Li~lGvdrILTSG 187 (287)
T 3iwp_A 122 LYGADGLVFGA--LTED-GHIDKE-LCMSLMAICR--PLPVTFH------RAFDMVHDPMA--ALETLLTLGFERVLTSG 187 (287)
T ss_dssp HTTCSEEEECC--BCTT-SCBCHH-HHHHHHHHHT--TSCEEEC------GGGGGCSCHHH--HHHHHHHHTCSEEEECT
T ss_pred HcCCCEEEEee--eCCC-CCcCHH-HHHHHHHHcC--CCcEEEE------CchhccCCHHH--HHHHHHHcCCCEEECCC
Confidence 66 99999983 2222 111222 3445666653 3454431 12111222222 23344455999999988
Q ss_pred cccCCCCHHHHHHHHHHHHHHhhc
Q 008319 408 ETAHGKFPLKAVKVMHTVALRTES 431 (570)
Q Consensus 408 ETA~G~yP~eaV~~m~~I~~~aE~ 431 (570)
--+. ..+-+..+++++..+..
T Consensus 188 ~~~~---a~~Gl~~Lk~Lv~~a~~ 208 (287)
T 3iwp_A 188 CDSS---ALEGLPLIKRLIEQAKG 208 (287)
T ss_dssp TSSS---TTTTHHHHHHHHHHHTT
T ss_pred CCCC---hHHhHHHHHHHHHHhCC
Confidence 5322 25777888888877764
No 197
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=55.26 E-value=67 Score=30.86 Aligned_cols=129 Identities=16% Similarity=0.088 Sum_probs=59.3
Q ss_pred hHHHhhhhhhcCCcEEEecCC--CChhHHHHHHHHHHhcC--CCceEEEe-----------ecCcc--------hhhhHH
Q 008319 269 DWEDIKFGVDNQVDFYAVSFV--KDAKVVHELKDYLKSCN--ADIHVIVK-----------IESAD--------SIPNLH 325 (570)
Q Consensus 269 D~~dI~~~~~~gvd~I~~SfV--~sa~dv~~vr~~l~~~~--~~i~IiaK-----------IEt~~--------gv~Nld 325 (570)
+.+++..+++.|+|.|.+.-. +...+...++++++..+ .+ .++.- +++.. ..+-+.
T Consensus 85 ~~~~i~~~~~~Gad~v~lg~~~~~~~~~~~~~~~~~~~~g~~~~-~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~ 163 (266)
T 2w6r_A 85 KMEHFLEAFLAGADKALAASVFHFREIDMRELKEYLKKHGGSGQ-AVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVV 163 (266)
T ss_dssp STHHHHHHHHHTCSEEECCCCC------CHHHHHHCC----CCC-EEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHH
T ss_pred CHHHHHHHHHcCCcHhhhhHHHHhCCCCHHHHHHHHHHcCCCCC-EEEEEEEEEecCCCEEEEECCCceecchhHHHHHH
Confidence 345566667789999887632 11114445666655444 22 12222 22221 122334
Q ss_pred HHHHh-CCEEEEcCCC-cccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEE
Q 008319 326 SIISA-SDGAMVARGD-LGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAV 403 (570)
Q Consensus 326 eIl~~-sDgImIgrGD-Lg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~v 403 (570)
.+.+. ++.|++...+ =+...|. ++ ...++ .+...+.|++.. ...-+.. |+..+...|+|++
T Consensus 164 ~~~~~G~~~i~~t~~~~~g~~~g~-~~-~~i~~---l~~~~~ipvia~---------GGI~~~e---d~~~~~~~Gadgv 226 (266)
T 2w6r_A 164 EVEKRGAGEILLTSIDRDGTKSGY-DT-EMIRF---VRPLTTLPIIAS---------GGAGKME---HFLEAFLAGADAA 226 (266)
T ss_dssp HHHHTTCSEEEEEETTTTTTCSCC-CH-HHHHH---HGGGCCSCEEEE---------SCCCSHH---HHHHHHHHTCSEE
T ss_pred HHHHcCCCEEEEEeecCCCCcCCC-CH-HHHHH---HHHHcCCCEEEe---------CCCCCHH---HHHHHHHcCCHHH
Confidence 44444 7888873211 1122232 22 12222 233458999853 4444433 5555666799999
Q ss_pred EecccccCCCCH
Q 008319 404 MLSGETAHGKFP 415 (570)
Q Consensus 404 mLs~ETA~G~yP 415 (570)
++..---.+.++
T Consensus 227 ~vgsal~~~~~~ 238 (266)
T 2w6r_A 227 LAASVFHFREID 238 (266)
T ss_dssp EESTTTC-----
T ss_pred HccHHHHcCCCC
Confidence 996443334433
No 198
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=55.23 E-value=1.1e+02 Score=31.18 Aligned_cols=120 Identities=15% Similarity=0.106 Sum_probs=72.9
Q ss_pred HHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHHhhcCCC
Q 008319 355 EDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLP 434 (570)
Q Consensus 355 k~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~~~ 434 (570)
.-+...|++.|.++.+.- |..+....+...-..|++.+...+ ..-++.+...+++.+-...+
T Consensus 89 ~a~A~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~v~~------~~~~~~~~a~~l~~~~~~~~- 150 (346)
T 3l6b_A 89 QALTYAAKLEGIPAYIVV-----------PQTAPDCKKLAIQAYGASIVYCEP------SDESRENVAKRVTEETEGIM- 150 (346)
T ss_dssp HHHHHHHHHTTCCEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECS------SHHHHHHHHHHHHHHHTCEE-
T ss_pred HHHHHHHHHhCCCEEEEE-----------CCCCCHHHHHHHHHCCCEEEEECC------CHHHHHHHHHHHHHhcCCEE-
Confidence 355667999999988741 221122345566778999877643 23577777777766543221
Q ss_pred CCCCCCCcccCCCCChhHHHHHHHHHHHhhcCC--cEEEEcCChHHHHHHHh----cCCCCeEEEEeCCHH
Q 008319 435 VSITPPTQFSAHKSHMGDMFAFHSTTMANTLNT--PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQER 499 (570)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a--~Iiv~T~sG~tA~~ls~----~RP~~pIiavt~~~~ 499 (570)
..+ +.+. .....-...+.++.++++. .||+.+-+|.+.--+++ ..|.+.||++-+...
T Consensus 151 i~~-~~np------~~~~g~~t~~~Ei~~q~~~~d~vvv~vG~GG~~aGi~~~~k~~~p~~~vigVe~~~~ 214 (346)
T 3l6b_A 151 VHP-NQEP------AVIAGQGTIALEVLNQVPLVDALVVPVGGGGMLAGIAITVKALKPSVKVYAAEPSNA 214 (346)
T ss_dssp CCS-SSCH------HHHHHHHHHHHHHHHHSTTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGG
T ss_pred ECC-CCCh------HHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCCC
Confidence 111 1110 0111122234566777654 78999999988776654 479999999998753
No 199
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=54.82 E-value=46 Score=31.49 Aligned_cols=125 Identities=13% Similarity=0.138 Sum_probs=63.8
Q ss_pred HHHhhhhhhcCCcEEEecC--CCChhHHHHHHHHHHhcCCCceEE--Ee-------ecCc-------chhhhHHHHHHh-
Q 008319 270 WEDIKFGVDNQVDFYAVSF--VKDAKVVHELKDYLKSCNADIHVI--VK-------IESA-------DSIPNLHSIISA- 330 (570)
Q Consensus 270 ~~dI~~~~~~gvd~I~~Sf--V~sa~dv~~vr~~l~~~~~~i~Ii--aK-------IEt~-------~gv~NldeIl~~- 330 (570)
.++++.+++.|+|.|.+.. ..+++.+.+ .++..+..+.+- ++ +++. +.++.++...+.
T Consensus 86 ~~~~~~~l~~Gad~V~lg~~~l~~p~~~~~---~~~~~g~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~~G 162 (244)
T 2y88_A 86 DESLAAALATGCARVNVGTAALENPQWCAR---VIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSEG 162 (244)
T ss_dssp HHHHHHHHHTTCSEEEECHHHHHCHHHHHH---HHHHHGGGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCEEEECchHhhChHHHHH---HHHHcCCCEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHHhCC
Confidence 4457777889999987763 233333433 343334332211 11 2222 234555555566
Q ss_pred CCEEEEcCCCcccCC-CCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHh---CccEEEec
Q 008319 331 SDGAMVARGDLGAEL-PIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE---GADAVMLS 406 (570)
Q Consensus 331 sDgImIgrGDLg~ei-g~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~---G~D~vmLs 406 (570)
+|.|++-..+..-.. |+ .+. ..+++. +..+.|++. ....-+. .|+..+... |+|++|+.
T Consensus 163 ~~~i~~~~~~~~~~~~g~-~~~-~~~~l~---~~~~ipvia---------~GGI~~~---~d~~~~~~~~~~Gad~v~vG 225 (244)
T 2y88_A 163 CSRFVVTDITKDGTLGGP-NLD-LLAGVA---DRTDAPVIA---------SGGVSSL---DDLRAIATLTHRGVEGAIVG 225 (244)
T ss_dssp CCCEEEEETTTTTTTSCC-CHH-HHHHHH---TTCSSCEEE---------ESCCCSH---HHHHHHHTTGGGTEEEEEEC
T ss_pred CCEEEEEecCCccccCCC-CHH-HHHHHH---HhCCCCEEE---------ECCCCCH---HHHHHHHhhccCCCCEEEEc
Confidence 888877443332111 22 322 222222 345889885 3444443 345556666 99999986
Q ss_pred ccccCCCC
Q 008319 407 GETAHGKF 414 (570)
Q Consensus 407 ~ETA~G~y 414 (570)
.---.+.+
T Consensus 226 ~al~~~~~ 233 (244)
T 2y88_A 226 KALYARRF 233 (244)
T ss_dssp HHHHTTSS
T ss_pred HHHHCCCc
Confidence 33233443
No 200
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=54.65 E-value=14 Score=35.26 Aligned_cols=60 Identities=18% Similarity=0.282 Sum_probs=43.9
Q ss_pred eeecCCCEEEEEEec--CCC---CccEEEeccCCccc--ccccCCEEEEe--CCeeEEEEEEEeCCeEE
Q 008319 179 IILKEGQEFNFTIKR--GVS---TEDTVSVNYDDFVN--DVEVGDILLVD--GGMMSLAVKSKTKDLVK 238 (570)
Q Consensus 179 i~l~~G~~v~lt~~~--~~~---~~~~i~v~~~~l~~--~v~~Gd~I~iD--DG~i~l~V~~~~~~~i~ 238 (570)
.-++.|++++|+... .++ ......++.+.|.. .+++|+.+.+. +|.+..+|++++++.|+
T Consensus 50 ~Gm~vGe~~~v~Ippe~aYGe~~~~lV~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~v~~~~V~ 118 (196)
T 2kfw_A 50 EGHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVV 118 (196)
T ss_dssp SSSCTTCEEEEECSTTTTSSCCCTTTCEEECGGGCCCSSCCCTTCEEEEEETTEEEEEEBCCCCSSSEE
T ss_pred cCCCCCCEEEEEeCcHHhcCCCChhhEEEEEHHHCCCccCcccCCEEEEECCCCcEEEEEEEEcCCEEE
Confidence 457899999999763 222 33455677777764 58999999997 56677778888888765
No 201
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=54.63 E-value=1.1e+02 Score=31.84 Aligned_cols=121 Identities=10% Similarity=0.060 Sum_probs=63.1
Q ss_pred CCChhhHHHh--------hhhhhcCCcEEEec-------------CCCChhH----------------HHHHHHHHHhcC
Q 008319 264 SITDKDWEDI--------KFGVDNQVDFYAVS-------------FVKDAKV----------------VHELKDYLKSCN 306 (570)
Q Consensus 264 ~lt~kD~~dI--------~~~~~~gvd~I~~S-------------fV~sa~d----------------v~~vr~~l~~~~ 306 (570)
.||..|++.+ +.+.+.|+|+|=+- ..+...| ++.+|+.+ +
T Consensus 155 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~av---g 231 (377)
T 2r14_A 155 ALETDEIPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVF---G 231 (377)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHH---C
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHc---C
Confidence 5787777665 34467899999763 2222111 22333333 5
Q ss_pred CCceEEEeecCc---------chhhhHHHHHHh-----CCEEEEcCCCcccCCCCCCHHHHHHHHHHH-HHHcCCCEEEE
Q 008319 307 ADIHVIVKIESA---------DSIPNLHSIISA-----SDGAMVARGDLGAELPIEDVPLLQEDIIRR-CRSMQKPVIVA 371 (570)
Q Consensus 307 ~~i~IiaKIEt~---------~gv~NldeIl~~-----sDgImIgrGDLg~eig~~~v~~~qk~Ii~~-c~~~gKPviva 371 (570)
.+ .|..||-.. ...+...++++. +|.|-+..|...-..+... ...++. .+..+.|||..
T Consensus 232 ~~-~v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~-----~~~~~~ik~~~~iPvi~~ 305 (377)
T 2r14_A 232 PE-RVGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYP-----EGFREQMRQRFKGGLIYC 305 (377)
T ss_dssp GG-GEEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------CCC-----TTHHHHHHHHCCSEEEEE
T ss_pred CC-cEEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcch-----HHHHHHHHHHCCCCEEEE
Confidence 45 788888321 112333334433 7888886654311111111 122222 33457898864
Q ss_pred ccchhhhhcCCCcChHHHhHHHHHHHhC-ccEEEec
Q 008319 372 TNMLESMIDHPTPTRAEVSDIAIAVREG-ADAVMLS 406 (570)
Q Consensus 372 TqmLeSM~~~~~PtrAEv~Dv~nav~~G-~D~vmLs 406 (570)
. .. + ..+...++..| +|+|++.
T Consensus 306 G---------gi-~---~~~a~~~l~~g~aD~V~ig 328 (377)
T 2r14_A 306 G---------NY-D---AGRAQARLDDNTADAVAFG 328 (377)
T ss_dssp S---------SC-C---HHHHHHHHHTTSCSEEEES
T ss_pred C---------CC-C---HHHHHHHHHCCCceEEeec
Confidence 2 22 3 23455778888 9999985
No 202
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=54.58 E-value=1.5e+02 Score=29.08 Aligned_cols=121 Identities=19% Similarity=0.220 Sum_probs=68.8
Q ss_pred HHhhhhhhcCCcEEE--ecC---CCChhHHHHHHHHHHhcCCCceEEEeecCc------------chhhhHHHHHHh--C
Q 008319 271 EDIKFGVDNQVDFYA--VSF---VKDAKVVHELKDYLKSCNADIHVIVKIESA------------DSIPNLHSIISA--S 331 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~--~Sf---V~sa~dv~~vr~~l~~~~~~i~IiaKIEt~------------~gv~NldeIl~~--s 331 (570)
+.+..+.+.|+|.|= +=| ..+.+++.+.-..|.+.-.++++|.-+-|. +-++-+...++. +
T Consensus 36 ~~~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~~ll~~~~~~g~~ 115 (257)
T 2yr1_A 36 REAEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGEIPILFTIRSEREGGQPIPLNEAEVRRLIEAICRSGAI 115 (257)
T ss_dssp HHHHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHSSSCCEEEECCCTTTTCCCCSSCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhccCCCEEEEEeecccCCCCCCCCHHHHHHHHHHHHHcCCC
Confidence 445555666777752 222 234455543333343332356788766543 122233444443 5
Q ss_pred CEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhH-HHHHHHhCccEEEec
Q 008319 332 DGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSD-IAIAVREGADAVMLS 406 (570)
Q Consensus 332 DgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~D-v~nav~~G~D~vmLs 406 (570)
|.|=| |+..++ ..+++++.+++.|..+|.+-+ -+..+|+..|+.. ...+...|+|.+=+.
T Consensus 116 d~iDv-------El~~~~---~~~~l~~~~~~~~~kvI~S~H-----df~~tP~~~el~~~~~~~~~~gaDivKia 176 (257)
T 2yr1_A 116 DLVDY-------ELAYGE---RIADVRRMTEECSVWLVVSRH-----YFDGTPRKETLLADMRQAERYGADIAKVA 176 (257)
T ss_dssp SEEEE-------EGGGTT---HHHHHHHHHHHTTCEEEEEEE-----ESSCCCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CEEEE-------ECCCCh---hHHHHHHHHHhCCCEEEEEec-----CCCCCcCHHHHHHHHHHHHhcCCCEEEEE
Confidence 65544 443333 666888889999999998633 2245777777544 456777888877653
No 203
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=54.54 E-value=9.2 Score=33.01 Aligned_cols=65 Identities=8% Similarity=0.093 Sum_probs=50.2
Q ss_pred ChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHhCCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEE
Q 008319 291 DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 370 (570)
Q Consensus 291 sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPviv 370 (570)
|.--+..++++.++.|-++.+.| .+...+++.+.-.|.|++| |.+....+++-+.|...|+||.+
T Consensus 19 Tsllv~km~~~a~~~gi~v~i~a-----~~~~~~~~~~~~~DvvLLg----------PQV~y~~~~ik~~~~~~~ipV~v 83 (108)
T 3nbm_A 19 SAQLANAINEGANLTEVRVIANS-----GAYGAHYDIMGVYDLIILA----------PQVRSYYREMKVDAERLGIQIVA 83 (108)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEE-----EETTSCTTTGGGCSEEEEC----------GGGGGGHHHHHHHHTTTTCEEEE
T ss_pred HHHHHHHHHHHHHHCCCceEEEE-----cchHHHHhhccCCCEEEEC----------hHHHHHHHHHHHHhhhcCCcEEE
Confidence 33345678888888888877777 2444567777779999998 46777788888889999999986
No 204
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=54.54 E-value=17 Score=39.44 Aligned_cols=51 Identities=14% Similarity=0.236 Sum_probs=42.7
Q ss_pred CCceEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHH
Q 008319 99 RKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKE 149 (570)
Q Consensus 99 r~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~ 149 (570)
.+..+-+.+|+.....+.++.|+++|+++.=+|.+|+..+...++++.+|+
T Consensus 243 ~rl~V~aavg~~~d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~ 293 (511)
T 3usb_A 243 GRLLVGAAVGVTADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRA 293 (511)
T ss_dssp SCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH
T ss_pred cceeeeeeeeeccchHHHHHHHHhhccceEEecccccchhhhhhHHHHHHH
Confidence 356677788888888999999999999999999999988877777766664
No 205
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=54.39 E-value=35 Score=31.77 Aligned_cols=67 Identities=18% Similarity=0.142 Sum_probs=41.7
Q ss_pred HHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEE--eecCcchhhhHHHHHHh-CCEEEEcCCCcc
Q 008319 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIV--KIESADSIPNLHSIISA-SDGAMVARGDLG 342 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~Iia--KIEt~~gv~NldeIl~~-sDgImIgrGDLg 342 (570)
+++..+.+.|+|+|.+ |-.....+..++++.+....++++++ =| ..+|+.++++. +||+.+|++=+.
T Consensus 112 ~e~~~a~~~G~d~v~v-~~t~~~g~~~~~~l~~~~~~~ipvia~GGI----~~~~i~~~~~~Ga~gv~vGsai~~ 181 (212)
T 2v82_A 112 TEAFTALEAGAQALKI-FPSSAFGPQYIKALKAVLPSDIAVFAVGGV----TPENLAQWIDAGCAGAGLGSDLYR 181 (212)
T ss_dssp HHHHHHHHTTCSEEEE-TTHHHHCHHHHHHHHTTSCTTCEEEEESSC----CTTTHHHHHHHTCSEEEECTTTCC
T ss_pred HHHHHHHHCCCCEEEE-ecCCCCCHHHHHHHHHhccCCCeEEEeCCC----CHHHHHHHHHcCCCEEEEChHHhC
Confidence 3455667889999986 32222234444444433332466665 23 25788888888 999999976443
No 206
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=53.87 E-value=58 Score=29.70 Aligned_cols=60 Identities=22% Similarity=0.276 Sum_probs=43.4
Q ss_pred eecCCCEEEEEEec--CCC---CccEEEeccCCccc--ccccCCEEEEe--CCe-eEEEEEEEeCCeEEE
Q 008319 180 ILKEGQEFNFTIKR--GVS---TEDTVSVNYDDFVN--DVEVGDILLVD--GGM-MSLAVKSKTKDLVKC 239 (570)
Q Consensus 180 ~l~~G~~v~lt~~~--~~~---~~~~i~v~~~~l~~--~v~~Gd~I~iD--DG~-i~l~V~~~~~~~i~~ 239 (570)
-++.|++..|+... .+| ......++.+.|.. .+++|+.+.+. +|. +..+|++++++.+..
T Consensus 46 Gm~~Ge~~~v~ipp~~aYG~~~~~lv~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~v~v 115 (158)
T 3cgm_A 46 GREEGEAFQAHVPAEKAYGPHDPEGVQVVPLSAFPEDAEVVPGAQFYAQDMEGNPMPLTVVAVEGEEVTV 115 (158)
T ss_dssp TCBTTCEEEEEECGGGTTCCCCGGGEEEEEGGGSCTTSCCCTTCEEEEEETTTEEEEEEEEEEETTEEEE
T ss_pred CCCCCCEEEEEECcHHHcCCCCcceEEEEEHHHCCCCCCCccCCEEEEECCCCCEEEEEEEEECCCEEEE
Confidence 46899999998752 233 23455677777764 68999999997 564 467899999887653
No 207
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=53.83 E-value=1.1e+02 Score=30.32 Aligned_cols=133 Identities=17% Similarity=0.115 Sum_probs=74.1
Q ss_pred ccCCCCCChhhH-HHhhhhhhcCCcEEEe--cCC---CChhHHHHHHHHHHhcCCCceEEEeecCcc-----------hh
Q 008319 259 SANLPSITDKDW-EDIKFGVDNQVDFYAV--SFV---KDAKVVHELKDYLKSCNADIHVIVKIESAD-----------SI 321 (570)
Q Consensus 259 ~~~lp~lt~kD~-~dI~~~~~~gvd~I~~--SfV---~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~-----------gv 321 (570)
.+++..-+..+. ++++.+...|+|.|=+ =+. ...+++.++-..+.+.-.++++|.-+-+.. -+
T Consensus 43 ~v~l~~~~~~e~~~~~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~ 122 (276)
T 3o1n_A 43 IVSLMGKTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQALTTGQYI 122 (276)
T ss_dssp EEEECCSSHHHHHHHHHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSSCEEEECCBGGGTCSBCCCHHHHH
T ss_pred EEEeCCCCHHHHHHHHHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCCCCCCHHHHH
Confidence 344444343332 4444444567887632 333 334555544444544434677888775521 12
Q ss_pred hhHHHHHHh--CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhH-HHHHHHh
Q 008319 322 PNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSD-IAIAVRE 398 (570)
Q Consensus 322 ~NldeIl~~--sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~D-v~nav~~ 398 (570)
+-+...++. +|.|=| |+..+ ....++++..+++.|..+|..-+- +..+|+..|+.. ...+...
T Consensus 123 ~ll~~~l~~g~~dyIDv-------El~~~--~~~~~~l~~~a~~~~~kvI~S~Hd-----f~~tP~~~el~~~~~~~~~~ 188 (276)
T 3o1n_A 123 DLNRAAVDSGLVDMIDL-------ELFTG--DDEVKATVGYAHQHNVAVIMSNHD-----FHKTPAAEEIVQRLRKMQEL 188 (276)
T ss_dssp HHHHHHHHHTCCSEEEE-------EGGGC--HHHHHHHHHHHHHTTCEEEEEEEE-----SSCCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCCEEEE-------ECcCC--HHHHHHHHHHHHhCCCEEEEEeec-----CCCCcCHHHHHHHHHHHHHc
Confidence 223333333 465544 33222 357788999999999999986432 345677777554 4456677
Q ss_pred CccEEEe
Q 008319 399 GADAVML 405 (570)
Q Consensus 399 G~D~vmL 405 (570)
|+|.+=+
T Consensus 189 GaDIvKi 195 (276)
T 3o1n_A 189 GADIPKI 195 (276)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 8887755
No 208
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=53.35 E-value=96 Score=31.10 Aligned_cols=129 Identities=10% Similarity=0.081 Sum_probs=0.0
Q ss_pred CChhhHHHhhhhhhcCCcEEEecC-------------CCChhHHHHHHHHHHhcCCCceEEEeecC-------cchhhhH
Q 008319 265 ITDKDWEDIKFGVDNQVDFYAVSF-------------VKDAKVVHELKDYLKSCNADIHVIVKIES-------ADSIPNL 324 (570)
Q Consensus 265 lt~kD~~dI~~~~~~gvd~I~~Sf-------------V~sa~dv~~vr~~l~~~~~~i~IiaKIEt-------~~gv~Nl 324 (570)
+|-+|.---+.+-+.|+|.|.+.. --+-+++...-+.+.+.-....|++=++- .++++|.
T Consensus 22 ~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~na 101 (275)
T 1o66_A 22 LTAYESSFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAAA 101 (275)
T ss_dssp EECCSHHHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCTTSSSSCHHHHHHHH
T ss_pred EeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCCCCccCCHHHHHHHH
Q ss_pred HHHHHh-CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEE-------EEccchhhhhcCCCcChHH--HhHHHH
Q 008319 325 HSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVI-------VATNMLESMIDHPTPTRAE--VSDIAI 394 (570)
Q Consensus 325 deIl~~-sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvi-------vaTqmLeSM~~~~~PtrAE--v~Dv~n 394 (570)
..+++. +++|-+-=| ..+...|+++.++|.||+ -..+.+.......+..+++ +.|.-.
T Consensus 102 ~rl~kaGa~aVklEdg------------~e~~~~I~al~~agIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA~a 169 (275)
T 1o66_A 102 AELMAAGAHMVKLEGG------------VWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDAKA 169 (275)
T ss_dssp HHHHHTTCSEEEEECS------------GGGHHHHHHHHHTTCCEEEEEESCGGGTTC-----------CHHHHHHHHHH
T ss_pred HHHHHcCCcEEEECCc------------HHHHHHHHHHHHcCCCeEeeeccCceeecccCCeEEEeChHHHHHHHHHHHH
Q ss_pred HHHhCccEEEe
Q 008319 395 AVREGADAVML 405 (570)
Q Consensus 395 av~~G~D~vmL 405 (570)
+...|+|+++|
T Consensus 170 ~~eAGA~~ivl 180 (275)
T 1o66_A 170 HDDAGAAVVLM 180 (275)
T ss_dssp HHHTTCSEEEE
T ss_pred HHHcCCcEEEE
No 209
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=53.25 E-value=57 Score=35.13 Aligned_cols=127 Identities=14% Similarity=0.121 Sum_probs=74.8
Q ss_pred HHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHHhhcCCC
Q 008319 355 EDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLP 434 (570)
Q Consensus 355 k~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~~~ 434 (570)
.-+...|+..|.++.+. .|..+....+...-..|++.+....+... ..+..+++...+++.+....++
T Consensus 126 ~a~A~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~v~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~ 193 (527)
T 3pc3_A 126 IGLAMACAVKGYKCIIV-----------MPEKMSNEKVSALRTLGAKIIRTPTEAAY-DSPEGLIYVAQQLQRETPNSIV 193 (527)
T ss_dssp HHHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECTTSCT-TSTTSHHHHHHHHHHHSSSEEC
T ss_pred HHHHHHHHHhCCeEEEE-----------EcCCCCHHHHHHHHHCCCEEEEeCCCCCc-ccHHHHHHHHHHHHHhCCCcEe
Confidence 34566888999998874 12222233455667789998887644211 1133456666666655433322
Q ss_pred CCCCCCCcccCCCCChhHHHHHHHHHHHhhcC--C-cEEEEcCChHHHHHHHhc----CCCCeEEEEeCCHH
Q 008319 435 VSITPPTQFSAHKSHMGDMFAFHSTTMANTLN--T-PIIVFTRTGSMAVILSHY----RPSSTIFAFTNQER 499 (570)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~--a-~Iiv~T~sG~tA~~ls~~----RP~~pIiavt~~~~ 499 (570)
..++ .+. .++..-....+.++.++++ . .||+.+-+|.++--++++ .|.+.||++.+...
T Consensus 194 ~~~~-~n~-----~n~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~GG~~~G~~~~~k~~~p~~~vigve~~~~ 259 (527)
T 3pc3_A 194 LDQY-RNA-----GNPLAHYDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVDPYGS 259 (527)
T ss_dssp CCTT-TCT-----HHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEETTC
T ss_pred cCCC-CCc-----chHHHHHHHHHHHHHHhcCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCCc
Confidence 2221 110 0011111223456777775 4 789999999888776654 89999999998654
No 210
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=52.92 E-value=82 Score=30.90 Aligned_cols=130 Identities=18% Similarity=0.204 Sum_probs=75.3
Q ss_pred HHhhhhhhcCCcEEEe-----cCCCC----hhHHHHHHHHHHhcCCCceEE--EeecCcchhhhHHHHHHh-CCEEEEcC
Q 008319 271 EDIKFGVDNQVDFYAV-----SFVKD----AKVVHELKDYLKSCNADIHVI--VKIESADSIPNLHSIISA-SDGAMVAR 338 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~-----SfV~s----a~dv~~vr~~l~~~~~~i~Ii--aKIEt~~gv~NldeIl~~-sDgImIgr 338 (570)
+.++...+.|+|++-+ .||.+ +.-++.+|++ ..+..+- -||++++. -++...++ +|+|-+..
T Consensus 44 ~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~----~p~~~ldvHLmv~~p~~--~i~~~~~aGAd~itvH~ 117 (246)
T 3inp_A 44 DDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDY----GITAGMDVHLMVKPVDA--LIESFAKAGATSIVFHP 117 (246)
T ss_dssp HHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHH----TCCSCEEEEEECSSCHH--HHHHHHHHTCSEEEECG
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHh----CCCCeEEEEEeeCCHHH--HHHHHHHcCCCEEEEcc
Confidence 4455566778987755 56644 3445555554 2122322 47888865 36777776 99999852
Q ss_pred CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEe-cccccCC-----
Q 008319 339 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML-SGETAHG----- 412 (570)
Q Consensus 339 GDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL-s~ETA~G----- 412 (570)
|-. +. ..+.++.++++|+-++++. .-.+|-. .+ ..+..++|.+++ |-+...|
T Consensus 118 -----Ea~-~~----~~~~i~~ir~~G~k~Gval-------np~Tp~e-~l----~~~l~~vD~VlvMsV~PGfgGQ~fi 175 (246)
T 3inp_A 118 -----EAS-EH----IDRSLQLIKSFGIQAGLAL-------NPATGID-CL----KYVESNIDRVLIMSVNPGFGGQKFI 175 (246)
T ss_dssp -----GGC-SC----HHHHHHHHHTTTSEEEEEE-------CTTCCSG-GG----TTTGGGCSEEEEECSCTTC--CCCC
T ss_pred -----ccc-hh----HHHHHHHHHHcCCeEEEEe-------cCCCCHH-HH----HHHHhcCCEEEEeeecCCCCCcccc
Confidence 211 22 3677888899999999973 2222321 12 235567898875 4444333
Q ss_pred CCHHHHHHHHHHHHHH
Q 008319 413 KFPLKAVKVMHTVALR 428 (570)
Q Consensus 413 ~yP~eaV~~m~~I~~~ 428 (570)
.+.++=++.+++++.+
T Consensus 176 ~~~l~KI~~lr~~~~~ 191 (246)
T 3inp_A 176 PAMLDKAKEISKWISS 191 (246)
T ss_dssp TTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHh
Confidence 3445555555555543
No 211
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=52.64 E-value=1.6e+02 Score=28.16 Aligned_cols=112 Identities=10% Similarity=0.052 Sum_probs=70.7
Q ss_pred CChhhHHHhhhh-hhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEE--eecCc-------chhhhHHHHHHh-CCE
Q 008319 265 ITDKDWEDIKFG-VDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIV--KIESA-------DSIPNLHSIISA-SDG 333 (570)
Q Consensus 265 lt~kD~~dI~~~-~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~Iia--KIEt~-------~gv~NldeIl~~-sDg 333 (570)
-++.+...+..+ .+.|+.+|.+ .+.++++++|+.. +++|+. |.+-. .-++.+++..+. +|.
T Consensus 33 ~~~~~~~~~A~a~~~~Ga~~i~~---~~~~~i~~ir~~v-----~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~ 104 (232)
T 3igs_A 33 DKPEIVAAMALAAEQAGAVAVRI---EGIDNLRMTRSLV-----SVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAI 104 (232)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEE---ESHHHHHHHHTTC-----CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSE
T ss_pred CCcchHHHHHHHHHHCCCeEEEE---CCHHHHHHHHHhc-----CCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCE
Confidence 345666666544 4679998765 4788888887643 566665 32210 124456776766 999
Q ss_pred EEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEe
Q 008319 334 AMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 405 (570)
Q Consensus 334 ImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL 405 (570)
|.++-..+ .. + ...+++++.+++.|.+++.- ..|.. +.-.+...|+|.+..
T Consensus 105 V~l~~~~~---~~-p---~~l~~~i~~~~~~g~~v~~~-----------v~t~e---ea~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 105 IAVDGTAR---QR-P---VAVEALLARIHHHHLLTMAD-----------CSSVD---DGLACQRLGADIIGT 155 (232)
T ss_dssp EEEECCSS---CC-S---SCHHHHHHHHHHTTCEEEEE-----------CCSHH---HHHHHHHTTCSEEEC
T ss_pred EEECcccc---CC-H---HHHHHHHHHHHHCCCEEEEe-----------CCCHH---HHHHHHhCCCCEEEE
Confidence 98853321 11 1 24567888888999998863 22333 345778899999963
No 212
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=52.58 E-value=18 Score=39.11 Aligned_cols=51 Identities=16% Similarity=0.257 Sum_probs=41.1
Q ss_pred CceEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHH
Q 008319 100 KTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEY 150 (570)
Q Consensus 100 ~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~ 150 (570)
+-.+.+.+|......+.++.++++|+++.=||++||.++...++++.+|+.
T Consensus 243 rl~vga~vG~~~~~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~ 293 (514)
T 1jcn_A 243 QLLCGAAVGTREDDKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQK 293 (514)
T ss_dssp CBCCEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHH
T ss_pred ceeeeeEecCchhhHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHh
Confidence 344566678776778999999999999999999999987666777777753
No 213
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=52.14 E-value=16 Score=37.17 Aligned_cols=61 Identities=23% Similarity=0.334 Sum_probs=38.0
Q ss_pred CCCCCCHHHHHHHHHhCCcEEEEecCCCChH-------HHHHHHHHHHHHHhhcCCCcEEEEeecCCC
Q 008319 108 GPSTSSREMIWKLAEEGMNVARLNMSHGDHA-------SHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (570)
Q Consensus 108 GPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e-------~~~~~i~~ir~~~~~~~~~~i~I~~Dl~Gp 168 (570)
|+...+.+.|+.|.+.|+|++||-++..... .-...++.++++......+-+.+++|+-..
T Consensus 39 ~~p~~t~~di~~i~~~G~n~vRipi~w~~~~~~~~~~~~~~~~l~~l~~~v~~a~~~Gi~vildlH~~ 106 (345)
T 3ndz_A 39 GNPMTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLHHE 106 (345)
T ss_dssp SCCCCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEECCCSC
T ss_pred CCCCCcHHHHHHHHHCCCCEEEEeeehHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEecCCc
Confidence 3344578999999999999999998754210 012233334443332222457888998765
No 214
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=51.44 E-value=2.2e+02 Score=29.36 Aligned_cols=155 Identities=14% Similarity=0.125 Sum_probs=93.1
Q ss_pred CCChhhHHHhhhh-hhcCCcEEEecC-CCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CC--EEEEcC
Q 008319 264 SITDKDWEDIKFG-VDNQVDFYAVSF-VKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SD--GAMVAR 338 (570)
Q Consensus 264 ~lt~kD~~dI~~~-~~~gvd~I~~Sf-V~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sD--gImIgr 338 (570)
.++..|+..|... .+.|+|.|=+.| ..++++...++. +.+.+.+..+.+-.-. -.++++..++. .| .++++-
T Consensus 21 ~~~~~~k~~ia~~L~~~Gv~~IE~g~p~~~~~~~~~~~~-i~~~~~~~~v~~~~r~--~~~di~~a~~~g~~~v~i~~~~ 97 (382)
T 2ztj_A 21 NFSTQDKVEIAKALDEFGIEYIEVTTPVASPQSRKDAEV-LASLGLKAKVVTHIQC--RLDAAKVAVETGVQGIDLLFGT 97 (382)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHH-HHTSCCSSEEEEEEES--CHHHHHHHHHTTCSEEEEEECC
T ss_pred CcCHHHHHHHHHHHHHcCcCEEEEcCCcCCHHHHHHHHH-HHhcCCCcEEEEEccc--ChhhHHHHHHcCCCEEEEEecc
Confidence 4677888666544 468999998866 356666655554 4444555555543210 12334444444 56 455555
Q ss_pred CCcccC---CCCCCHHHHHHHHHHHHHHcC--CCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCC
Q 008319 339 GDLGAE---LPIEDVPLLQEDIIRRCRSMQ--KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGK 413 (570)
Q Consensus 339 GDLg~e---ig~~~v~~~qk~Ii~~c~~~g--KPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~ 413 (570)
.|+-.. +..+++....+..++.++++| ..|.+. +.....-+...+.+++.++.+-+|.+.|. +|.=.-
T Consensus 98 s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~------~ed~~~~~~~~~~~~~~~~~~~a~~i~l~-DT~G~~ 170 (382)
T 2ztj_A 98 SKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFS------AEDTFRSEEQDLLAVYEAVAPYVDRVGLA-DTVGVA 170 (382)
T ss_dssp --------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEE------ETTTTTSCHHHHHHHHHHHGGGCSEEEEE-ETTSCC
T ss_pred CHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEE------EEeCCCCCHHHHHHHHHHHHHhcCEEEec-CCCCCC
Confidence 553222 122455666788999999999 555443 12233444445677777665559988884 787778
Q ss_pred CHHHHHHHHHHHHHH
Q 008319 414 FPLKAVKVMHTVALR 428 (570)
Q Consensus 414 yP~eaV~~m~~I~~~ 428 (570)
.|-++-+.+..+...
T Consensus 171 ~P~~~~~lv~~l~~~ 185 (382)
T 2ztj_A 171 TPRQVYALVREVRRV 185 (382)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh
Confidence 899998888888765
No 215
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=51.28 E-value=69 Score=31.78 Aligned_cols=108 Identities=18% Similarity=0.226 Sum_probs=67.7
Q ss_pred hHHHhhh-hhhcCCcEEEec-----CCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhh---HHHHHHh-CCEEEEcC
Q 008319 269 DWEDIKF-GVDNQVDFYAVS-----FVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPN---LHSIISA-SDGAMVAR 338 (570)
Q Consensus 269 D~~dI~~-~~~~gvd~I~~S-----fV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~N---ldeIl~~-sDgImIgr 338 (570)
|..++.. ..+.|+++|-+- |-.+.+++.++++.. +++|+.| +.+-+ +++-... +|+|.++-
T Consensus 73 ~p~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v-----~lPvl~k----dfiid~~qv~~A~~~GAD~VlLi~ 143 (272)
T 3qja_A 73 DPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASV-----SIPVLRK----DFVVQPYQIHEARAHGADMLLLIV 143 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHC-----SSCEEEE----SCCCSHHHHHHHHHTTCSEEEEEG
T ss_pred CHHHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhC-----CCCEEEC----ccccCHHHHHHHHHcCCCEEEEec
Confidence 3444433 345799998653 222456666666542 5677755 23333 3444444 99999976
Q ss_pred CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecc
Q 008319 339 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (570)
Q Consensus 339 GDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (570)
.||. +.-.++++..|++.|..+++.+ -+..| +..+...|+|.+-.++
T Consensus 144 a~l~--------~~~l~~l~~~a~~lGl~~lvev-----------~t~ee---~~~A~~~Gad~IGv~~ 190 (272)
T 3qja_A 144 AALE--------QSVLVSMLDRTESLGMTALVEV-----------HTEQE---ADRALKAGAKVIGVNA 190 (272)
T ss_dssp GGSC--------HHHHHHHHHHHHHTTCEEEEEE-----------SSHHH---HHHHHHHTCSEEEEES
T ss_pred ccCC--------HHHHHHHHHHHHHCCCcEEEEc-----------CCHHH---HHHHHHCCCCEEEECC
Confidence 6764 2345678899999999988642 12333 4456678999998874
No 216
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=51.22 E-value=22 Score=38.37 Aligned_cols=50 Identities=18% Similarity=0.392 Sum_probs=41.8
Q ss_pred CceEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHH
Q 008319 100 KTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKE 149 (570)
Q Consensus 100 ~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~ 149 (570)
+..+-+.+|...+..+.++.|+++|+++.=||.+||......++++.+|+
T Consensus 217 rl~v~aavG~~~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~ 266 (490)
T 4avf_A 217 RLRVGAAVGTGADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQ 266 (490)
T ss_dssp CBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHH
T ss_pred cceeeeeeccccchHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHH
Confidence 45566677887788999999999999999999999998877777777765
No 217
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=51.16 E-value=1e+02 Score=29.39 Aligned_cols=100 Identities=11% Similarity=0.084 Sum_probs=55.9
Q ss_pred HHhhhhhhcCCcEEEecCC-------CChhHHHHHHHHHHhcCCCceEEEe-ec------CcchhhhHHHHHHh-----C
Q 008319 271 EDIKFGVDNQVDFYAVSFV-------KDAKVVHELKDYLKSCNADIHVIVK-IE------SADSIPNLHSIISA-----S 331 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV-------~sa~dv~~vr~~l~~~~~~i~IiaK-IE------t~~gv~NldeIl~~-----s 331 (570)
+.++.+.+.|+|+|-+... .+.+++.++++.+++.|-.+..++- .. ..+.++.+...++. +
T Consensus 19 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~ 98 (286)
T 3dx5_A 19 DIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLEITMISDYLDISLSADFEKTIEKCEQLAILANWFKT 98 (286)
T ss_dssp HHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCeEEEEecCCCCCCchhHHHHHHHHHHHHHHHHHhCC
Confidence 4567788999999987432 1346777888888887766554421 10 01234444444443 5
Q ss_pred CEEEEcCCCcccCCCC----CCHHHHHHHHHHHHHHcCCCEEE
Q 008319 332 DGAMVARGDLGAELPI----EDVPLLQEDIIRRCRSMQKPVIV 370 (570)
Q Consensus 332 DgImIgrGDLg~eig~----~~v~~~qk~Ii~~c~~~gKPviv 370 (570)
+.|.+.+|...-.... +.+....+++...|.++|..+.+
T Consensus 99 ~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l 141 (286)
T 3dx5_A 99 NKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLL 141 (286)
T ss_dssp CEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 5666655543321111 22334445666666777765553
No 218
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=51.12 E-value=1.2e+02 Score=29.94 Aligned_cols=120 Identities=10% Similarity=0.052 Sum_probs=73.3
Q ss_pred HHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHHhhcC-CC
Q 008319 356 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESS-LP 434 (570)
Q Consensus 356 ~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~-~~ 434 (570)
-+...|+..|.++.+. .|.......+...-..|++.+...++. .| -++.+...+++.+-... ++
T Consensus 76 a~A~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~v~~~~~~~---~~-~~~~~~a~~~~~~~~~~~~~ 140 (316)
T 1y7l_A 76 ALAYVAAARGYKITLT-----------MPETMSLERKRLLCGLGVNLVLTEGAK---GM-KGAIAKAEEIVASDPSRYVM 140 (316)
T ss_dssp HHHHHHHHHTCCEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCTTTEEC
T ss_pred HHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHcCCEEEEeCCCC---CH-HHHHHHHHHHHHhCCCCEEE
Confidence 4667788999998874 122122234556677899988765431 13 35777666665543322 22
Q ss_pred CCCCCCCcccCCCCChhHHH---HHHHHHHHhhcC--C-cEEEEcCChHHHHHHHhc----C-CCCeEEEEeCCHH
Q 008319 435 VSITPPTQFSAHKSHMGDMF---AFHSTTMANTLN--T-PIIVFTRTGSMAVILSHY----R-PSSTIFAFTNQER 499 (570)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~i---a~~av~~a~~~~--a-~Iiv~T~sG~tA~~ls~~----R-P~~pIiavt~~~~ 499 (570)
..+ |. ++.... ...+.++.++++ . .||+.+-+|.++.-++++ . |...||++.+...
T Consensus 141 ~~~-~~--------n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~~ 207 (316)
T 1y7l_A 141 LKQ-FE--------NPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEPVES 207 (316)
T ss_dssp CCT-TT--------CTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHTSCCCCEEEEEEETTS
T ss_pred CCC-CC--------CHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccccHHHHHHHHHHhCCCCCEEEEEecCCC
Confidence 111 11 111111 223467777775 4 799999999998777753 4 9999999998754
No 219
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=51.11 E-value=28 Score=36.95 Aligned_cols=98 Identities=9% Similarity=0.062 Sum_probs=55.4
Q ss_pred CCCChhhHHHhh-hhhhcCCcEEEecCCCC---------------------hhHHHHHHHHHHhcCCCceEEEeecCcch
Q 008319 263 PSITDKDWEDIK-FGVDNQVDFYAVSFVKD---------------------AKVVHELKDYLKSCNADIHVIVKIESADS 320 (570)
Q Consensus 263 p~lt~kD~~dI~-~~~~~gvd~I~~SfV~s---------------------a~dv~~vr~~l~~~~~~i~IiaKIEt~~g 320 (570)
|.+++.|..++. .+.+.|+|+|.++.--. +..++.+++.-+..+.++.||+- -|
T Consensus 278 pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~----GG 353 (415)
T 3i65_A 278 PDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIAS----GG 353 (415)
T ss_dssp SCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEC----SS
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEE----CC
Confidence 567776776664 45689999999885211 11123344444444557888872 34
Q ss_pred hhhHHHHHH---h-CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCC
Q 008319 321 IPNLHSIIS---A-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQK 366 (570)
Q Consensus 321 v~NldeIl~---~-sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gK 366 (570)
|.+.+++.+ . +|+|+|||+=+.- |..-+..+.+.+.+...+.|.
T Consensus 354 I~s~eDa~e~l~aGAd~VqIgra~l~~--GP~~~~~i~~~L~~~l~~~G~ 401 (415)
T 3i65_A 354 IFSGLDALEKIEAGASVCQLYSCLVFN--GMKSAVQIKRELNHLLYQRGY 401 (415)
T ss_dssp CCSHHHHHHHHHHTEEEEEESHHHHHH--GGGHHHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHcCCCEEEEcHHHHhc--CHHHHHHHHHHHHHHHHHcCC
Confidence 444444333 3 8999999975521 222234455555555555553
No 220
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=50.88 E-value=64 Score=32.11 Aligned_cols=97 Identities=12% Similarity=0.068 Sum_probs=57.1
Q ss_pred HHhhhhhhcCCcEEEec------CCCCh-hHHHHHHHHHHhcCCCceEEEeec---CcchhhhHHHHHHh-CCEEEEcCC
Q 008319 271 EDIKFGVDNQVDFYAVS------FVKDA-KVVHELKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S------fV~sa-~dv~~vr~~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDgImIgrG 339 (570)
+.++|-++.|+|++.+. +.-+. |..+-++...+..+.+++||+-+= |.++++.....-+. +|++++-+-
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (292)
T 2ojp_A 26 KLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTP 105 (292)
T ss_dssp HHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCC
Confidence 45567788999998763 22233 333334445555567889999884 35555555554444 899998654
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
.+.- +.-..+.+..-..+.+.+.|+++.
T Consensus 106 ~y~~----~s~~~l~~~f~~ia~a~~lPiilY 133 (292)
T 2ojp_A 106 YYNR----PSQEGLYQHFKAIAEHTDLPQILY 133 (292)
T ss_dssp CSSC----CCHHHHHHHHHHHHTTCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 4321 122233333334455668999974
No 221
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=50.84 E-value=1.7e+02 Score=28.62 Aligned_cols=147 Identities=16% Similarity=0.191 Sum_probs=85.5
Q ss_pred CCCChhhH-HHhhhhhhcC-CcEEEecCCCChhHHHHHHHHHHhcCCCceEEEee----cCcchhhhHHHHHHh-----C
Q 008319 263 PSITDKDW-EDIKFGVDNQ-VDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI----ESADSIPNLHSIISA-----S 331 (570)
Q Consensus 263 p~lt~kD~-~dI~~~~~~g-vd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKI----Et~~gv~NldeIl~~-----s 331 (570)
|..++.++ +.++.+++.| +|+|-+=.-... .+.++.+.... .+++||+-- +|+. .+++.+++.. +
T Consensus 95 ~~~~~~~~~~ll~~~~~~g~~d~iDvEl~~~~-~~~~l~~~~~~--~~~kvI~S~Hdf~~tP~-~~el~~~~~~~~~~ga 170 (257)
T 2yr1_A 95 IPLNEAEVRRLIEAICRSGAIDLVDYELAYGE-RIADVRRMTEE--CSVWLVVSRHYFDGTPR-KETLLADMRQAERYGA 170 (257)
T ss_dssp CSSCHHHHHHHHHHHHHHTCCSEEEEEGGGTT-HHHHHHHHHHH--TTCEEEEEEEESSCCCC-HHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHcCCCCEEEEECCCCh-hHHHHHHHHHh--CCCEEEEEecCCCCCcC-HHHHHHHHHHHHhcCC
Confidence 45676665 5567888888 999987753322 44444443333 346666643 4553 4555555543 6
Q ss_pred CEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccE--EEecccc
Q 008319 332 DGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADA--VMLSGET 409 (570)
Q Consensus 332 DgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~--vmLs~ET 409 (570)
|.+=|+. +.-..+++..+++-..+......+|+|.- ||-.....+| +.+.+. |.-. ..+...+
T Consensus 171 DivKia~----~a~s~~D~l~ll~~~~~~~~~~~~P~I~~-----~MG~~G~~SR-----i~~~~~-GS~~Tf~~l~~~s 235 (257)
T 2yr1_A 171 DIAKVAV----MPKSPEDVLVLLQATEEARRELAIPLITM-----AMGGLGAITR-----LAGWLF-GSAVTFAVGNQSS 235 (257)
T ss_dssp SEEEEEE----CCSSHHHHHHHHHHHHHHHHHCSSCEEEE-----ECTTTTHHHH-----HHGGGG-TBCEEECBSSSCS
T ss_pred CEEEEEe----ccCCHHHHHHHHHHHHHHhccCCCCEEEE-----ECCCCcchHH-----HHHHHh-CCceEecCCCCCC
Confidence 8777752 11122455555543333323347898863 5555554444 666655 3333 3366788
Q ss_pred cCCCCHHHHHHHHHHHHHH
Q 008319 410 AHGKFPLKAVKVMHTVALR 428 (570)
Q Consensus 410 A~G~yP~eaV~~m~~I~~~ 428 (570)
|-|..+++-++.+-++...
T Consensus 236 APGQl~~~el~~~l~~l~~ 254 (257)
T 2yr1_A 236 APGQIPIDDVRTVLSILQT 254 (257)
T ss_dssp STTCCBHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHH
Confidence 9999998887766665544
No 222
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=50.83 E-value=62 Score=29.99 Aligned_cols=60 Identities=20% Similarity=0.375 Sum_probs=44.2
Q ss_pred eecCCCEEEEEEec--CCC---CccEEEeccCCccc--ccccCCEEEEe--CCe-eEEEEEEEeCCeEEE
Q 008319 180 ILKEGQEFNFTIKR--GVS---TEDTVSVNYDDFVN--DVEVGDILLVD--GGM-MSLAVKSKTKDLVKC 239 (570)
Q Consensus 180 ~l~~G~~v~lt~~~--~~~---~~~~i~v~~~~l~~--~v~~Gd~I~iD--DG~-i~l~V~~~~~~~i~~ 239 (570)
-++.|++..|+... .+| ......++.+.|.. .+++|+.+.+. ||. +..+|++++++.|+.
T Consensus 74 gm~~Ge~~~v~Ipp~~AYG~~~~~lv~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~V~v 143 (169)
T 4dt4_A 74 GLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDSITV 143 (169)
T ss_dssp TCCTTCEEEEEECGGGTTCCCCGGGEEEEEGGGGTTTCCCCTTCEEEEECTTSCEEEEEEEEEETTEEEE
T ss_pred CCCCCCEEEEEEChHHhcCCCChHHEEEeCHHHCCCcCCCCCCcEEEEECCCCCEEEEEEEEEcCCEEEE
Confidence 47899999998762 333 23455677777764 58999999996 454 788999999998764
No 223
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=50.80 E-value=61 Score=32.42 Aligned_cols=97 Identities=16% Similarity=0.183 Sum_probs=55.1
Q ss_pred HHHHHh-CCEEEEc-C-CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHH-HhHHHHHHHhCc
Q 008319 325 HSIISA-SDGAMVA-R-GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (570)
Q Consensus 325 deIl~~-sDgImIg-r-GDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~ 400 (570)
+..++. +||+++. - |+ +..+..++-..+.+..++.++....|||.- ....+-+| +.-.-.|-..|+
T Consensus 35 ~~li~~Gv~gl~v~GttGE-~~~Ls~~Er~~v~~~~~~~~~g~rvpviaG---------vg~~~t~~ai~la~~a~~~Ga 104 (301)
T 3m5v_A 35 KRQIENGIDAVVPVGTTGE-SATLTHEEHRTCIEIAVETCKGTKVKVLAG---------AGSNATHEAVGLAKFAKEHGA 104 (301)
T ss_dssp HHHHHTTCCEEECSSTTTT-GGGSCHHHHHHHHHHHHHHHTTSSCEEEEE---------CCCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEECccccC-hhhCCHHHHHHHHHHHHHHhCCCCCeEEEe---------CCCCCHHHHHHHHHHHHHcCC
Confidence 334444 8999983 1 11 112222333333333343333225788864 23334445 555667778899
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHHHhhc
Q 008319 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTES 431 (570)
Q Consensus 401 D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~ 431 (570)
|++|+..=--...-+-+.++....|+..+.-
T Consensus 105 davlv~~P~y~~~s~~~l~~~f~~va~a~~l 135 (301)
T 3m5v_A 105 DGILSVAPYYNKPTQQGLYEHYKAIAQSVDI 135 (301)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCSS
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 9999964332333457889999999988753
No 224
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=50.41 E-value=32 Score=32.69 Aligned_cols=124 Identities=14% Similarity=0.115 Sum_probs=64.4
Q ss_pred hhhhhhcCCcEEEec-----CCCChhHHHHHHHHHHhcCCCceEEE--eecCcchhhhHHHHHHh-CCEEEEcCCCcccC
Q 008319 273 IKFGVDNQVDFYAVS-----FVKDAKVVHELKDYLKSCNADIHVIV--KIESADSIPNLHSIISA-SDGAMVARGDLGAE 344 (570)
Q Consensus 273 I~~~~~~gvd~I~~S-----fV~sa~dv~~vr~~l~~~~~~i~Iia--KIEt~~gv~NldeIl~~-sDgImIgrGDLg~e 344 (570)
.+...+.|+|+|-+. |...... ..+++.-+.. ++++++ .|.+++ .+++.++. +|+|++++..|.-
T Consensus 37 a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~--~ipv~v~ggi~~~~---~~~~~l~~Gad~V~lg~~~l~~- 109 (244)
T 2y88_A 37 ALGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGKL--DVQVELSGGIRDDE---SLAAALATGCARVNVGTAALEN- 109 (244)
T ss_dssp HHHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHHC--SSEEEEESSCCSHH---HHHHHHHTTCSEEEECHHHHHC-
T ss_pred HHHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHhc--CCcEEEECCCCCHH---HHHHHHHcCCCEEEECchHhhC-
Confidence 345567899998773 5555433 3344433332 456665 566654 46666666 9999999766532
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCEEEEccch----h-hh-hcCC---CcChHHHhHHHHHHHhCccEEEecccccCCCC
Q 008319 345 LPIEDVPLLQEDIIRRCRSMQKPVIVATNML----E-SM-IDHP---TPTRAEVSDIAIAVREGADAVMLSGETAHGKF 414 (570)
Q Consensus 345 ig~~~v~~~qk~Ii~~c~~~gKPvivaTqmL----e-SM-~~~~---~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~y 414 (570)
+. .+.+..+..|..++++-... . +- ++.- .++. ...+-.+...|+|.+++++-+.-|.|
T Consensus 110 ------p~---~~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~--~e~~~~~~~~G~~~i~~~~~~~~~~~ 177 (244)
T 2y88_A 110 ------PQ---WCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDL--WDVLERLDSEGCSRFVVTDITKDGTL 177 (244)
T ss_dssp ------HH---HHHHHHHHHGGGEEEEEEEEEETTEEEEEEGGGTEEEEEH--HHHHHHHHHTTCCCEEEEETTTTTTT
T ss_pred ------hH---HHHHHHHHcCCCEEEEEeccccCCCCEEEECCccCCCCCH--HHHHHHHHhCCCCEEEEEecCCcccc
Confidence 12 23333334443344332111 0 00 0000 0011 23344566779999998876554443
No 225
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=49.87 E-value=2.6e+02 Score=29.61 Aligned_cols=165 Identities=10% Similarity=0.076 Sum_probs=96.6
Q ss_pred cCcccccCCCccCCCCCChhhHHHhhhh-hhcCCcEEEecC-CCChhHHHHHHHHHHhcCCCceEEEee-cCcchhhhHH
Q 008319 249 SRRHLNVRGKSANLPSITDKDWEDIKFG-VDNQVDFYAVSF-VKDAKVVHELKDYLKSCNADIHVIVKI-ESADSIPNLH 325 (570)
Q Consensus 249 s~KgIn~p~~~~~lp~lt~kD~~dI~~~-~~~gvd~I~~Sf-V~sa~dv~~vr~~l~~~~~~i~IiaKI-Et~~gv~Nld 325 (570)
-|.|-.-|+.. ++..|+-.|... .+.|+|.|=+.| ..++++...++... +.+.+..+.+.+ .+.++ ++
T Consensus 47 LRDG~Q~~~~~-----~s~eeKl~Ia~~L~~~Gv~~IEvG~P~asp~d~~~~~~i~-~~~~~~~v~~~~r~~~~d---i~ 117 (423)
T 3ivs_A 47 LREGEQFANAF-----FDTEKKIQIAKALDNFGVDYIELTSPVASEQSRQDCEAIC-KLGLKCKILTHIRCHMDD---AR 117 (423)
T ss_dssp TTGGGGSTTCC-----CCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHH-TSCCSSEEEEEEESCHHH---HH
T ss_pred CCCCCCCCCCC-----cCHHHHHHHHHHHHHcCCCEEEEeecccCHHHHHHHHHHH-hcCCCCEEEEeeccChhh---HH
Confidence 45555555543 567787666544 468999997754 56677766666544 445555555432 22222 23
Q ss_pred HHHHh-CC--EEEEcCCCccc----CCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHH-HHH
Q 008319 326 SIISA-SD--GAMVARGDLGA----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVR 397 (570)
Q Consensus 326 eIl~~-sD--gImIgrGDLg~----eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~n-av~ 397 (570)
..++. +| .++++-.|+-. ....+++.....++++.++++|..|.+... + .. ..+...+.+++. +..
T Consensus 118 ~A~~aG~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~e--d--a~--r~d~~~~~~v~~~~~~ 191 (423)
T 3ivs_A 118 VAVETGVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSE--D--SF--RSDLVDLLSLYKAVDK 191 (423)
T ss_dssp HHHHTTCSEEEEEEEC-------------CHHHHHHHHHHHHHHTTTCEEEEEEE--S--GG--GSCHHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEc--c--Cc--CCCHHHHHHHHHHHHH
Confidence 33333 56 44555555322 233456677778899999999999887521 1 11 122233445544 456
Q ss_pred hCccEEEecccccCCCCHHHHHHHHHHHHHHh
Q 008319 398 EGADAVMLSGETAHGKFPLKAVKVMHTVALRT 429 (570)
Q Consensus 398 ~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~a 429 (570)
.|+|.+.|. +|.=.-.|-++-+.+..+..+.
T Consensus 192 ~Ga~~i~l~-DTvG~~~P~~v~~lv~~l~~~~ 222 (423)
T 3ivs_A 192 IGVNRVGIA-DTVGCATPRQVYDLIRTLRGVV 222 (423)
T ss_dssp HCCSEEEEE-ETTSCCCHHHHHHHHHHHHHHC
T ss_pred hCCCccccC-CccCcCCHHHHHHHHHHHHhhc
Confidence 799998884 8887788998888887776543
No 226
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=49.82 E-value=2.4e+02 Score=29.34 Aligned_cols=139 Identities=17% Similarity=0.195 Sum_probs=91.2
Q ss_pred HHHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEee-c-CcchhhhHHHHHHh-CCEEEEcCCCcccCCC
Q 008319 270 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI-E-SADSIPNLHSIISA-SDGAMVARGDLGAELP 346 (570)
Q Consensus 270 ~~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKI-E-t~~gv~NldeIl~~-sDgImIgrGDLg~eig 346 (570)
.+.|..-.+.|+|.|-++. .+.++...++..-+. .+++++|=| - ...++. -++. +|.+=|.||.++-
T Consensus 49 v~Qi~~l~~aG~diVRvav-p~~~~a~al~~I~~~--~~vPlvaDiHf~~~lal~----a~e~G~dklRINPGNig~--- 118 (366)
T 3noy_A 49 LNQIKRLYEAGCEIVRVAV-PHKEDVEALEEIVKK--SPMPVIADIHFAPSYAFL----SMEKGVHGIRINPGNIGK--- 118 (366)
T ss_dssp HHHHHHHHHTTCCEEEEEC-CSHHHHHHHHHHHHH--CSSCEEEECCSCHHHHHH----HHHTTCSEEEECHHHHSC---
T ss_pred HHHHHHHHHcCCCEEEeCC-CChHHHHHHHHHHhc--CCCCEEEeCCCCHHHHHH----HHHhCCCeEEECCcccCc---
Confidence 4556666789999998874 566666666665444 468999987 2 222222 2444 9999999999873
Q ss_pred CCCHHHHHHHHHHHHHHcCCCEEEE-------ccchhhhhcCCCcChHH-----HhHHHHHHHhCccEEEecccccCCCC
Q 008319 347 IEDVPLLQEDIIRRCRSMQKPVIVA-------TNMLESMIDHPTPTRAE-----VSDIAIAVREGADAVMLSGETAHGKF 414 (570)
Q Consensus 347 ~~~v~~~qk~Ii~~c~~~gKPviva-------TqmLeSM~~~~~PtrAE-----v~Dv~nav~~G~D~vmLs~ETA~G~y 414 (570)
..--+.+++.|+++|+|+=+- ..+|+.+. .||... +..+.-+-..|+|-+++|- ...-
T Consensus 119 ----~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~yg---~~~~eamVeSAl~~~~~~e~~gf~~iviS~---K~S~ 188 (366)
T 3noy_A 119 ----EEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYG---YPSAEALAESALRWSEKFEKWGFTNYKVSI---KGSD 188 (366)
T ss_dssp ----HHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHS---SCCHHHHHHHHHHHHHHHHHTTCCCEEEEE---ECSS
T ss_pred ----hhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHhCCCCeEEEee---ecCC
Confidence 233468999999999998553 44444432 233222 2234455666999999884 4456
Q ss_pred HHHHHHHHHHHHHH
Q 008319 415 PLKAVKVMHTVALR 428 (570)
Q Consensus 415 P~eaV~~m~~I~~~ 428 (570)
+..+|+.-+.+..+
T Consensus 189 v~~~i~ayr~la~~ 202 (366)
T 3noy_A 189 VLQNVRANLIFAER 202 (366)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhc
Confidence 77777776666655
No 227
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=49.59 E-value=1.2e+02 Score=29.96 Aligned_cols=49 Identities=14% Similarity=0.018 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHc-CCCEEEEccchhhhhcCCCcChHHHhHHHH-HHHhCccEEEecccc
Q 008319 353 LQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSGET 409 (570)
Q Consensus 353 ~qk~Ii~~c~~~-gKPvivaTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vmLs~ET 409 (570)
...++++..+++ ++|+++ .-.+..+..++.+++. +...|+|++.+++=|
T Consensus 145 ~~~~iv~~vr~~~~~Pv~v--------Ki~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~ 195 (311)
T 1jub_A 145 ATEKLLKEVFTFFTKPLGV--------KLPPYFDLVHFDIMAEILNQFPLTYVNSVNSI 195 (311)
T ss_dssp HHHHHHHHHTTTCCSCEEE--------EECCCCSHHHHHHHHHHHTTSCCCEEEECCCE
T ss_pred HHHHHHHHHHHhcCCCEEE--------EECCCCCHHHHHHHHHHHHHcCCcEEEecCCC
Confidence 346777877776 899987 2344456666666544 455699999997644
No 228
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=49.38 E-value=28 Score=36.12 Aligned_cols=70 Identities=19% Similarity=0.159 Sum_probs=43.8
Q ss_pred HHhhhhhhcCCcEEEecC------------CCChhHHHHHHHH----HHhcCC-CceEEEeecCcchhhhHHHHHHh---
Q 008319 271 EDIKFGVDNQVDFYAVSF------------VKDAKVVHELKDY----LKSCNA-DIHVIVKIESADSIPNLHSIISA--- 330 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~Sf------------V~sa~dv~~vr~~----l~~~~~-~i~IiaKIEt~~gv~NldeIl~~--- 330 (570)
++.+.+.+.|+|+|.++. +.+.+.+.++++. +.+.+. ++.||+- -|+.+-.+|+++
T Consensus 223 e~a~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~----GGI~~~~dv~kalal 298 (393)
T 2qr6_A 223 TTALHMMRTGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIAD----GSIENSGDVVKAIAC 298 (393)
T ss_dssp HHHHHHHTTTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEEC----SSCCSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEE----CCCCCHHHHHHHHHc
Confidence 456667789999999875 2223333344443 222343 3888871 356666666655
Q ss_pred -CCEEEEcCCCcccC
Q 008319 331 -SDGAMVARGDLGAE 344 (570)
Q Consensus 331 -sDgImIgrGDLg~e 344 (570)
+|++++||.=|...
T Consensus 299 GA~~V~iG~~~l~~~ 313 (393)
T 2qr6_A 299 GADAVVLGSPLARAE 313 (393)
T ss_dssp TCSEEEECGGGGGST
T ss_pred CCCEEEECHHHHcCC
Confidence 89999999866554
No 229
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=49.34 E-value=65 Score=28.99 Aligned_cols=60 Identities=15% Similarity=0.105 Sum_probs=43.4
Q ss_pred eecCCCEEEEEEec--CCC---CccEEEeccCCcc-cccccCCEEEEe--CCe-eEEEEEEEeCCeEEE
Q 008319 180 ILKEGQEFNFTIKR--GVS---TEDTVSVNYDDFV-NDVEVGDILLVD--GGM-MSLAVKSKTKDLVKC 239 (570)
Q Consensus 180 ~l~~G~~v~lt~~~--~~~---~~~~i~v~~~~l~-~~v~~Gd~I~iD--DG~-i~l~V~~~~~~~i~~ 239 (570)
-++.|++..|+... .+| ......++...|- ..+++|+.+.+. ||. +..+|++++++.|+.
T Consensus 56 gm~~Ge~~~v~ipp~~aYG~~~~~~v~~v~~~~f~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~v~v 124 (151)
T 2kr7_A 56 KAQIGEWEEVVIAPEEAYGVYESSYLQEVPRDQFEGIELEKGMSVFGQTEDNQTIQAIIKDFSATHVMV 124 (151)
T ss_dssp TCCBTCEEEEEECGGGTTCSSCSCEEEEEEGGGGTTSCCCTTCEEEEEETTTEEEEEEEEEECSSEEEE
T ss_pred CCCCCCEEEEEEecHHHcCCCCcceEEEEcHHHcCCCCCccCCEEEEECCCCCEEEEEEEEECCCEEEE
Confidence 46899999998752 233 3334567766673 368999999987 575 678899999988764
No 230
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=49.29 E-value=34 Score=33.07 Aligned_cols=58 Identities=9% Similarity=0.094 Sum_probs=41.1
Q ss_pred HHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHH
Q 008319 354 QEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVAL 427 (570)
Q Consensus 354 qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~ 427 (570)
-...++.++++|++|.+-|-- +.+ -+..+...++..|+|+|+- .||..+.+++.++|+
T Consensus 201 ~~~~v~~~~~~G~~v~~wTv~-------~~~--n~~~~~~~l~~~GvdgI~T-------D~p~~~~~~l~~~~~ 258 (258)
T 2o55_A 201 TKEQVCTAHEKGLSVTVWMPW-------IFD--DSEEDWKKCLELQVDLICS-------NYPFGLMNFLSNISE 258 (258)
T ss_dssp CHHHHHHHHHTTCEEEEECCT-------TCC--CCHHHHHHHHHHTCSEEEE-------SCHHHHHHHHTC---
T ss_pred CHHHHHHHHHCCCEEEEeeCC-------CCC--CCHHHHHHHHHcCCCEEEe-------CCHHHHHHHHHHhcC
Confidence 367899999999999987620 001 1233456778899999886 799999999988774
No 231
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=48.95 E-value=1.1e+02 Score=31.58 Aligned_cols=119 Identities=13% Similarity=0.086 Sum_probs=70.3
Q ss_pred HHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHHhhcCCCC
Q 008319 356 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPV 435 (570)
Q Consensus 356 ~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~~~~ 435 (570)
-+...|+..|.++.+. .|..+....+...-..|++.+...+ .| -++.+...++..+.+..++.
T Consensus 107 alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~-----~~-~~a~~~a~~l~~~~~~~~~v 169 (372)
T 1p5j_A 107 AAAYAARQLGVPATIV-----------VPGTTPALTIERLKNEGATCKVVGE-----LL-DEAFELAKALAKNNPGWVYI 169 (372)
T ss_dssp HHHHHHHHHTCCEEEE-----------ECTTCCHHHHHHHHHTTCEEEECCS-----CH-HHHHHHHHHHHHHSTTEEEC
T ss_pred HHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHhcCCEEEEECC-----CH-HHHHHHHHHHHHhcCCcEEe
Confidence 4566789999998874 1211222345566677999876532 23 46777776666553222221
Q ss_pred CCCCCCcccCCCCChhHHHHHHHHHHHhhcC--C-cEEEEcCChHHHHHHHhc----C-CCCeEEEEeCCH
Q 008319 436 SITPPTQFSAHKSHMGDMFAFHSTTMANTLN--T-PIIVFTRTGSMAVILSHY----R-PSSTIFAFTNQE 498 (570)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~--a-~Iiv~T~sG~tA~~ls~~----R-P~~pIiavt~~~ 498 (570)
.+ |.+. .....-...+.++.++++ . .||+.+-+|.++--++++ . |.+.||++.+..
T Consensus 170 ~~-~~n~------~~~~G~~t~~~Ei~~ql~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~p~~~vigVe~~~ 233 (372)
T 1p5j_A 170 PP-FDDP------LIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQECGWGDVPVIAMETFG 233 (372)
T ss_dssp CS-SCCH------HHHHHHTHHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETT
T ss_pred CC-CCCH------HHHhhHHHHHHHHHHHcCCCCCEEEEecCCchHHHHHHHHHHHhCCCCceEEEEecCC
Confidence 11 1110 111212223456677764 4 799999999998776643 3 889999999863
No 232
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=48.84 E-value=1e+02 Score=31.19 Aligned_cols=121 Identities=12% Similarity=0.076 Sum_probs=72.7
Q ss_pred HHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHHhhcCC
Q 008319 354 QEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSL 433 (570)
Q Consensus 354 qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~~ 433 (570)
=.-+...|+..|.++.+. .|..+....+...-..|++.+....+. .| -++++...++..+-+..+
T Consensus 84 g~alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~~---~~-~~~~~~a~~~~~~~~~~~ 148 (334)
T 3tbh_A 84 GVSLAHLGAIRGYKVIIT-----------MPESMSLERRCLLRIFGAEVILTPAAL---GM-KGAVAMAKKIVAANPNAV 148 (334)
T ss_dssp HHHHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCTTEE
T ss_pred HHHHHHHHHHhCCCEEEE-----------ECCCCCHHHHHHHHHCCCEEEEECCCC---Cc-hHHHHHHHHHHHhCCCEE
Confidence 345677888999998874 122222334556678899998886442 22 456666655554432222
Q ss_pred CCCCCCCCcccCCCCChhHHH---HHHHHHHHhhcC--C-cEEEEcCChHHHHHHHh----cCCCCeEEEEeCCH
Q 008319 434 PVSITPPTQFSAHKSHMGDMF---AFHSTTMANTLN--T-PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQE 498 (570)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~i---a~~av~~a~~~~--a-~Iiv~T~sG~tA~~ls~----~RP~~pIiavt~~~ 498 (570)
+..+ |. ++...+ ...+.++.++++ . .||+.+-+|.++--+++ ..|.+.|+++.+..
T Consensus 149 ~i~~-~~--------np~n~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~ 214 (334)
T 3tbh_A 149 LADQ-FA--------TKYNALIHEETTGPEIWEQTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEPTE 214 (334)
T ss_dssp ECCT-TT--------CHHHHHHHHHTHHHHHHHHTTSCCSEEEEECSSSHHHHHHHHHHHHTTCCCEEEEEEETT
T ss_pred ECCc-cC--------ChhHHHHHHHHHHHHHHHHhCCCCCEEEeccCCcHhHHHHHHHHHHhCCCCEEEEEeeCC
Confidence 2111 11 122111 223456777764 3 78999999988776665 47999999997654
No 233
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=48.81 E-value=1e+02 Score=31.07 Aligned_cols=97 Identities=10% Similarity=0.101 Sum_probs=60.5
Q ss_pred HHhhhhhhcCCcEEEecC-------CCChhHHHHHHHHHHhcCCCceEEEee---cCcchhhhHHHHHHh-C-CEEEEcC
Q 008319 271 EDIKFGVDNQVDFYAVSF-------VKDAKVVHELKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-S-DGAMVAR 338 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~Sf-------V~sa~dv~~vr~~l~~~~~~i~IiaKI---Et~~gv~NldeIl~~-s-DgImIgr 338 (570)
+.+++-++.|+|++.+.= ....|..+-++...+..+.+++||+-+ -|.++++.....-+. . |++|+-+
T Consensus 32 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~ 111 (311)
T 3h5d_A 32 ALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIV 111 (311)
T ss_dssp HHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcC
Confidence 455777899999987542 222233333455556667789999987 356666666666665 4 9999875
Q ss_pred CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 339 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 339 GDLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
-.+.- +.-..+.+..-..+.+.+.|+++.
T Consensus 112 P~y~~----~s~~~l~~~f~~va~a~~lPiilY 140 (311)
T 3h5d_A 112 PYYNK----PSQEGMYQHFKAIADASDLPIIIY 140 (311)
T ss_dssp CCSSC----CCHHHHHHHHHHHHHSCSSCEEEE
T ss_pred CCCCC----CCHHHHHHHHHHHHHhCCCCEEEE
Confidence 44321 122334444555556679999975
No 234
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=48.78 E-value=65 Score=30.17 Aligned_cols=85 Identities=20% Similarity=0.257 Sum_probs=51.0
Q ss_pred HHhhhhhhcCCcEEEecCCCC--------hhHHHHHHHHHHhcCCCceEEE--eecCcchhhhHHHHHHh-CCEEEEcCC
Q 008319 271 EDIKFGVDNQVDFYAVSFVKD--------AKVVHELKDYLKSCNADIHVIV--KIESADSIPNLHSIISA-SDGAMVARG 339 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~s--------a~dv~~vr~~l~~~~~~i~Iia--KIEt~~gv~NldeIl~~-sDgImIgrG 339 (570)
+++..+.+.|+|+|.++-+-. +.++..++++.+.. ++++++ -| | .+|+.+.++. +||+.+|++
T Consensus 121 ~~~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~--~~pvia~GGI-~---~~nv~~~~~~Ga~gv~vgs~ 194 (221)
T 1yad_A 121 EEAVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRI--SIPVIAIGGM-T---PDRLRDVKQAGADGIAVMSG 194 (221)
T ss_dssp HHHHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHC--CSCEEEESSC-C---GGGHHHHHHTTCSEEEESHH
T ss_pred HHHHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhC--CCCEEEECCC-C---HHHHHHHHHcCCCEEEEhHH
Confidence 445666788999998875411 12345555554443 444444 56 4 3588888877 999999976
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcC
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSMQ 365 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~g 365 (570)
=+.. ++.....+++.+..++.+
T Consensus 195 i~~~----~d~~~~~~~~~~~~~~~~ 216 (221)
T 1yad_A 195 IFSS----AEPLEAARRYSRKLKEMR 216 (221)
T ss_dssp HHTS----SSHHHHHHHHHHHHHHHC
T ss_pred hhCC----CCHHHHHHHHHHHHHHhh
Confidence 4432 344455555555555433
No 235
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=48.62 E-value=1.7e+02 Score=29.45 Aligned_cols=120 Identities=15% Similarity=0.238 Sum_probs=72.5
Q ss_pred HHhhhhhhcCCcEEEecCCCCh--hHHHHHHHHHHhcCCCceEEE-e-e-cCcchhhhHHHHHHh-CCEEEEcCCCcccC
Q 008319 271 EDIKFGVDNQVDFYAVSFVKDA--KVVHELKDYLKSCNADIHVIV-K-I-ESADSIPNLHSIISA-SDGAMVARGDLGAE 344 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~sa--~dv~~vr~~l~~~~~~i~Iia-K-I-Et~~gv~NldeIl~~-sDgImIgrGDLg~e 344 (570)
+||..+.+.|+|+|.+.+...- -|+..++++++.++. ..+.- + + +..+-.+.++++++. .|.|+-+-+.-++
T Consensus 115 ~dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~~-l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG~~~~a- 192 (287)
T 3iwp_A 115 ADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICRP-LPVTFHRAFDMVHDPMAALETLLTLGFERVLTSGCDSSA- 192 (287)
T ss_dssp HHHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHTT-SCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECTTSSST-
T ss_pred HHHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcCC-CcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCCCCh-
Confidence 6888888999999999985433 577788888877654 22221 0 0 222356678888885 9999997664443
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHH-hCccEEEecccc
Q 008319 345 LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVR-EGADAVMLSGET 409 (570)
Q Consensus 345 ig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~-~G~D~vmLs~ET 409 (570)
.+.++.+.+ +++. ..|+..|.+ --...++- +...+. -|++.+-+|+-+
T Consensus 193 --~~Gl~~Lk~-Lv~~--a~~rI~Ima-------GGGV~~~N-----i~~l~~~tG~~~~H~S~~~ 241 (287)
T 3iwp_A 193 --LEGLPLIKR-LIEQ--AKGRIVVMP-------GGGITDRN-----LQRILEGSGATEFHCSARS 241 (287)
T ss_dssp --TTTHHHHHH-HHHH--HTTSSEEEE-------CTTCCTTT-----HHHHHHHHCCSEEEECCEE
T ss_pred --HHhHHHHHH-HHHH--hCCCCEEEE-------CCCcCHHH-----HHHHHHhhCCCEEeECcCc
Confidence 244444433 3333 234444543 12223332 333344 799999998643
No 236
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=48.52 E-value=1.9e+02 Score=28.25 Aligned_cols=94 Identities=23% Similarity=0.248 Sum_probs=57.1
Q ss_pred hhHHHHHHh-CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCc
Q 008319 322 PNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGA 400 (570)
Q Consensus 322 ~NldeIl~~-sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~ 400 (570)
+.+..+.+. +|.|+.-.++.|..-++.. +...+++.+ ....|+++. ...-+. .|+..++..|+
T Consensus 138 ~~a~~~~~~gad~v~~~~~~~Gt~~~~~~-~~~l~~i~~---~~~iPviv~---------gGI~t~---eda~~~~~~GA 201 (264)
T 1xm3_A 138 VLARKLEELGVHAIMPGASPIGSGQGILN-PLNLSFIIE---QAKVPVIVD---------AGIGSP---KDAAYAMELGA 201 (264)
T ss_dssp HHHHHHHHHTCSCBEECSSSTTCCCCCSC-HHHHHHHHH---HCSSCBEEE---------SCCCSH---HHHHHHHHTTC
T ss_pred HHHHHHHHhCCCEEEECCcccCCCCCCCC-HHHHHHHHh---cCCCCEEEE---------eCCCCH---HHHHHHHHcCC
Confidence 345555554 7777543455554444333 333333322 457899874 233222 35777889999
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHHHhhc
Q 008319 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTES 431 (570)
Q Consensus 401 D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~ 431 (570)
|+++..+--.....|.++++.+.+.+++...
T Consensus 202 dgViVGSAi~~a~dp~~~~~~l~~~v~~~~~ 232 (264)
T 1xm3_A 202 DGVLLNTAVSGADDPVKMARAMKLAVEAGRL 232 (264)
T ss_dssp SEEEESHHHHTSSSHHHHHHHHHHHHHHHHH
T ss_pred CEEEEcHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 9999875433446699999988887776654
No 237
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=48.45 E-value=21 Score=36.01 Aligned_cols=65 Identities=18% Similarity=0.185 Sum_probs=48.3
Q ss_pred hHHHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcch--hhhHHHHHHh-CCEEEEcC
Q 008319 269 DWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADS--IPNLHSIISA-SDGAMVAR 338 (570)
Q Consensus 269 D~~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~g--v~NldeIl~~-sDgImIgr 338 (570)
+.+.++.+++.|+|+|.+-.. ++++++++.+.+...+.++++.| --| .+|+.++.+. +|+|-+|.
T Consensus 202 tleea~eA~~aGaD~I~LDn~-~~e~l~~av~~l~~~~~~v~ieA----SGGIt~eni~~~a~tGVD~IsvGs 269 (285)
T 1o4u_A 202 NLEDALRAVEAGADIVMLDNL-SPEEVKDISRRIKDINPNVIVEV----SGGITEENVSLYDFETVDVISSSR 269 (285)
T ss_dssp SHHHHHHHHHTTCSEEEEESC-CHHHHHHHHHHHHHHCTTSEEEE----EECCCTTTGGGGCCTTCCEEEEGG
T ss_pred CHHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCceEEE----ECCCCHHHHHHHHHcCCCEEEEeH
Confidence 456777788999999999975 77888888888765444554443 223 4688888877 99999985
No 238
>1vhk_A Hypothetical protein YQEU; structural genomics, unknown function; 2.60A {Bacillus subtilis} SCOP: b.122.1.2 c.116.1.5
Probab=48.43 E-value=1.1e+02 Score=30.30 Aligned_cols=121 Identities=17% Similarity=0.194 Sum_probs=63.2
Q ss_pred ccccCCEEEEeCC---eeEEEEEEEeCCeEEEEEEeCcEeccCc--ccccCCCccCCCCCChhhHHHhhhhhhcCCcEEE
Q 008319 211 DVEVGDILLVDGG---MMSLAVKSKTKDLVKCIVVDGGELKSRR--HLNVRGKSANLPSITDKDWEDIKFGVDNQVDFYA 285 (570)
Q Consensus 211 ~v~~Gd~I~iDDG---~i~l~V~~~~~~~i~~~v~~gG~l~s~K--gIn~p~~~~~lp~lt~kD~~dI~~~~~~gvd~I~ 285 (570)
.+++||.|.+-|| ....+|.+++++.+.+++..--...... .|.+ ...+|. .++-..-|+.+.+.|++-|.
T Consensus 36 Rl~~Gd~i~l~dg~G~~~~a~I~~~~~~~~~~~i~~~~~~~~e~~~~v~L---~~al~K-~~r~e~ilqkatELGV~~I~ 111 (268)
T 1vhk_A 36 RMNEGDQIICCSQDGFEAKCELQSVSKDKVSCLVIEWTNENRELPIKVYI---ASGLPK-GDKLEWIIQKGTELGAHAFI 111 (268)
T ss_dssp CCCTTCEEEEECTTSCEEEEEEEEECSSEEEEEEEEECCCCCCCSSEEEE---EEECCS-TTHHHHHHHHHHHTTCCEEE
T ss_pred cCCCCCEEEEEeCCCCEEEEEEEEecCCEEEEEEEEEeccCCCCCccEEE---EEeeec-CccHHHHHHHHHHhCcCEEE
Confidence 4689999997654 5677888899998888876421111111 1111 122333 23333456789999999764
Q ss_pred ecCC-CCh---------hHHHHHHH----HHHhcCCCceEEEeecCcchhhhHHHHHHhCCEEEEc
Q 008319 286 VSFV-KDA---------KVVHELKD----YLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVA 337 (570)
Q Consensus 286 ~SfV-~sa---------~dv~~vr~----~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDgImIg 337 (570)
.=.. ++. .....+++ ..++++.. .+.+|+.+..++.+-+-....|..++.
T Consensus 112 p~~s~Rsv~~~~~~~~~kk~~Rw~~i~~eAaeQs~R~--~iP~v~~~~~~~~~l~~~~~~~~~lv~ 175 (268)
T 1vhk_A 112 PFQAARSVVKLDDKKAKKKRERWTKIAKEAAEQSYRN--EVPRVMDVHSFQQLLQRMQDFDKCVVA 175 (268)
T ss_dssp EECCTTCCCC---------HHHHHHHHHHHHHHTTCS--SCCEECCCBCHHHHHHHGGGSSEEEEE
T ss_pred EEEeeeeeeecccchhhhHHHHHHHHHHHHHHHcCCC--CCcEEecCCCHHHHHhhCccCCeEEEE
Confidence 3322 221 12333333 34454443 566776655444432222223555554
No 239
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=48.12 E-value=32 Score=33.69 Aligned_cols=145 Identities=18% Similarity=0.132 Sum_probs=83.3
Q ss_pred CCCChhhHHHh-hhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHH-------Hh-CCE
Q 008319 263 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSII-------SA-SDG 333 (570)
Q Consensus 263 p~lt~kD~~dI-~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl-------~~-sDg 333 (570)
|..|+.|.+.+ ..+.++|+..|+++ +..+...+ +| .+.++.|.+=|=-|.|-...+.-+ +. +|.
T Consensus 24 p~~t~~~i~~lc~eA~~~~~~aVcV~----p~~v~~a~-~l--~~~~v~v~tVigFP~G~~~~~~K~~E~~~Ai~~GAdE 96 (231)
T 3ndo_A 24 PEATPSDVTALVDEAADLGVFAVCVS----PPLVSVAA-GV--APSGLAIAAVAGFPSGKHVPGIKATEAELAVAAGATE 96 (231)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHH-HH--CCTTCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCcEEEEC----HHHHHHHH-Hh--cCCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 66778887554 67889999999886 55677777 66 355677777776665554332222 22 454
Q ss_pred EEEcCCCcccCCCC---CCHHHHHH---HHHHHHHHcCCC--EEEEccchhhhhcCCCcChHHHhHHHH-HHHhCccEEE
Q 008319 334 AMVARGDLGAELPI---EDVPLLQE---DIIRRCRSMQKP--VIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVM 404 (570)
Q Consensus 334 ImIgrGDLg~eig~---~~v~~~qk---~Ii~~c~~~gKP--vivaTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vm 404 (570)
|=+ -+.+|. .+...+.+ .+.+.|. |+| ||+-|-.|+. ..|..|+..... +...|+|+|=
T Consensus 97 IDm-----Vinig~lk~g~~~~v~~ei~~v~~a~~--~~~lKvIiEt~~L~~-----~~t~eei~~a~~ia~~aGADfVK 164 (231)
T 3ndo_A 97 IDM-----VIDVGAALAGDLDAVSADITAVRKAVR--AATLKVIVESAALLE-----FSGEPLLADVCRVARDAGADFVK 164 (231)
T ss_dssp EEE-----ECCHHHHHTTCHHHHHHHHHHHHHHTT--TSEEEEECCHHHHHH-----HTCHHHHHHHHHHHHHTTCSEEE
T ss_pred EEE-----EeehHhhhcccHHHHHHHHHHHHHHcc--CCceEEEEECcccCC-----CCCHHHHHHHHHHHHHHCcCEEE
Confidence 422 122222 23334444 4445553 444 4554444421 136677666554 4567999986
Q ss_pred eccccc-CCCCHHHHHHHHHHHH
Q 008319 405 LSGETA-HGKFPLKAVKVMHTVA 426 (570)
Q Consensus 405 Ls~ETA-~G~yP~eaV~~m~~I~ 426 (570)
-|.-=. .|.--++.|+.|++.+
T Consensus 165 TSTGf~~~~gAt~edv~lm~~~v 187 (231)
T 3ndo_A 165 TSTGFHPSGGASVQAVEIMARTV 187 (231)
T ss_dssp CCCSCCTTCSCCHHHHHHHHHHH
T ss_pred cCCCCCCCCCCCHHHHHHHHHHh
Confidence 552111 2333468999999986
No 240
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=48.11 E-value=20 Score=38.70 Aligned_cols=58 Identities=22% Similarity=0.324 Sum_probs=36.4
Q ss_pred CCCHHHHHHHHHhCCcEEEEecCCCCh-------HHHHHHHHHHHHHHhhcCCCcEEEEeecCCC
Q 008319 111 TSSREMIWKLAEEGMNVARLNMSHGDH-------ASHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (570)
Q Consensus 111 ~~~~e~l~~li~~Gm~v~RiN~sHg~~-------e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~Gp 168 (570)
..+.+.|+.|-+.|+|++||-++.... ..-.+.++.++++.+.+..+-+.+++||-..
T Consensus 45 ~~t~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~d~vv~~a~~~Gi~vildlH~~ 109 (515)
T 3icg_A 45 MTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLHHE 109 (515)
T ss_dssp CCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEEECCSC
T ss_pred cCCHHHHHHHHHCCCCEEEEccchHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEecCCC
Confidence 347899999999999999998874321 0011223333333333222458889998765
No 241
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=48.11 E-value=1.2e+02 Score=30.54 Aligned_cols=119 Identities=11% Similarity=0.116 Sum_probs=73.5
Q ss_pred HHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHHhhcC-CC
Q 008319 356 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESS-LP 434 (570)
Q Consensus 356 ~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~-~~ 434 (570)
-+...|+..|.++.+.. |.......+...-..|++.+...++. .| -++.+...++..+.... +.
T Consensus 92 alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~~---~~-~~~~~~a~~~~~~~~~~y~~ 156 (343)
T 2pqm_A 92 ALCQAGAVFGYRVNIAM-----------PSTMSVERQMIMKAFGAELILTEGKK---GM-PGAIEEVNKMIKENPGKYFV 156 (343)
T ss_dssp HHHHHHHHHTCCEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHSTTTEEE
T ss_pred HHHHHHHHcCCCEEEEE-----------CCCCCHHHHHHHHHCCCEEEEECCCC---CH-HHHHHHHHHHHHhCCCcEEE
Confidence 46677889999988741 22222334556677799988875432 13 36777666666544322 11
Q ss_pred CCCCCCCcccCCCCChhHH---HHHHHHHHHhhcC--C-cEEEEcCChHHHHHHHh----cCCCCeEEEEeCCHH
Q 008319 435 VSITPPTQFSAHKSHMGDM---FAFHSTTMANTLN--T-PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQER 499 (570)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~---ia~~av~~a~~~~--a-~Iiv~T~sG~tA~~ls~----~RP~~pIiavt~~~~ 499 (570)
..+ |. ++... ....+ ++.++++ . .||+.+-+|.++.-+++ ..|...|+++.+...
T Consensus 157 ~~~-~~--------n~~n~~~g~~t~~-Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigVe~~~~ 221 (343)
T 2pqm_A 157 ANQ-FG--------NPDNTAAHHYTAN-EIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEES 221 (343)
T ss_dssp CCT-TT--------CHHHHHHHHHHHH-HHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGG
T ss_pred CCC-CC--------ChhHHHHHHHHHH-HHHHHcCCCCCEEEEecCCchhHHHHHHHHHHcCCCCEEEEEecCCC
Confidence 111 11 12111 22334 7777775 4 79999999999877765 469999999998765
No 242
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=47.99 E-value=2e+02 Score=31.16 Aligned_cols=118 Identities=10% Similarity=0.022 Sum_probs=71.4
Q ss_pred HHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHHhhcCCCC
Q 008319 356 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPV 435 (570)
Q Consensus 356 ~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~~~~ 435 (570)
-+...|++.|.++.+. .|.-+ -...+...-..|++.++. |...-++.+...+++.+-. ..+.
T Consensus 93 avA~aa~~lGi~~~Iv---------mP~~~--p~~Kv~~~r~~GAeVvlv------~~~~dda~~~a~ela~e~g-~~~v 154 (514)
T 1tdj_A 93 GVAFSSARLGVKALIV---------MPTAT--ADIKVDAVRGFGGEVLLH------GANFDEAKAKAIELSQQQG-FTWV 154 (514)
T ss_dssp HHHHHHHHTTCCEEEE---------CCSSC--CHHHHHHHHHHSCEEECC------CSSHHHHHHHHHHHHHHHC-CEEC
T ss_pred HHHHHHHHcCCcEEEE---------ECCCC--CHHHHHHHHHCCCEEEEE------CCCHHHHHHHHHHHHHhcC-CEee
Confidence 3566788999999874 12111 123455666779987663 2234577777777665532 2111
Q ss_pred CCCCCCcccCCCCChhHHHHHHHHHHHhhcC-C-cEEEEcCChHHHHHHHh----cCCCCeEEEEeCCH
Q 008319 436 SITPPTQFSAHKSHMGDMFAFHSTTMANTLN-T-PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQE 498 (570)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~-a-~Iiv~T~sG~tA~~ls~----~RP~~pIiavt~~~ 498 (570)
.+ |.+. .....-..-+.++.++++ . .|+|.+-+|.++--+++ .+|.+.||++.+..
T Consensus 155 ~p-fdnp------~~iaGqgTig~EI~eQl~~~D~vvvpvGgGGliaGia~~lk~~~P~~kVIgVep~~ 216 (514)
T 1tdj_A 155 PP-FDHP------MVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAED 216 (514)
T ss_dssp CS-SCCH------HHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETT
T ss_pred CC-CCCH------HHHHHHHHHHHHHHHHCCCCCEEEEccCcHHHHHHHHHHHHHhCCCCEEEEEeccC
Confidence 11 1110 011111222567777775 4 89999999998777765 47999999999853
No 243
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=47.79 E-value=83 Score=31.65 Aligned_cols=149 Identities=11% Similarity=0.065 Sum_probs=84.0
Q ss_pred CCCChhhHHHh-hhhhhc--CCcEEEecCCCChhHHHHHHHHHHhcCC--CceEEEeecCcchhhhHHHH-------HHh
Q 008319 263 PSITDKDWEDI-KFGVDN--QVDFYAVSFVKDAKVVHELKDYLKSCNA--DIHVIVKIESADSIPNLHSI-------ISA 330 (570)
Q Consensus 263 p~lt~kD~~dI-~~~~~~--gvd~I~~SfV~sa~dv~~vr~~l~~~~~--~i~IiaKIEt~~gv~NldeI-------l~~ 330 (570)
|.-|+.|.+.+ +.+.++ |++.|+++ +..+...++.|...+. .++|.+-|=-|.|-...+.. ++.
T Consensus 43 p~~T~~dI~~lc~eA~~~~~~~aaVCV~----p~~V~~a~~~L~~~gs~~~v~v~tVigFP~G~~~~~~Kv~E~~~Av~~ 118 (281)
T 2a4a_A 43 ENGTEDDIRELCNESVKTCPFAAAVCVY----PKFVKFINEKIKQEINPFKPKIACVINFPYGTDSMEKVLNDTEKALDD 118 (281)
T ss_dssp TTCCHHHHHHHHHHHHSSSSCCSEEEEC----GGGHHHHHHHHHHHSSSCCSEEEEEESTTTCCSCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccCCccEEEEC----HHHHHHHHHHhhccCCCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHc
Confidence 55577776544 567788 99998876 5567777888864344 67887777555544433322 222
Q ss_pred -CCEEEEcCCCcccCCCC---CCHH---HHHHHHHHHHHHc-CCCE--EEEccchhhhhcCCCcChHH-H-hHHHHHHHh
Q 008319 331 -SDGAMVARGDLGAELPI---EDVP---LLQEDIIRRCRSM-QKPV--IVATNMLESMIDHPTPTRAE-V-SDIAIAVRE 398 (570)
Q Consensus 331 -sDgImIgrGDLg~eig~---~~v~---~~qk~Ii~~c~~~-gKPv--ivaTqmLeSM~~~~~PtrAE-v-~Dv~nav~~ 398 (570)
+|.|=+- +.+|. .+.. .+.++|-+..... ++|+ |+.|-.| +..| + .-.--+...
T Consensus 119 GAdEIDmV-----inig~lksg~~~~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L---------~d~e~i~~A~~ia~ea 184 (281)
T 2a4a_A 119 GADEIDLV-----INYKKIIENTDEGLKEATKLTQSVKKLLTNKILKVIIEVGEL---------KTEDLIIKTTLAVLNG 184 (281)
T ss_dssp TCSEEEEE-----CCHHHHHHSHHHHHHHHHHHHHHHHTTCTTSEEEEECCHHHH---------CSHHHHHHHHHHHHTT
T ss_pred CCCEEEEe-----cchHhhhCCChhHHHHHHHHHHHHHHHhcCCceEEEEecccC---------CcHHHHHHHHHHHHHh
Confidence 5654221 12221 1222 3344444433333 3553 6554444 4455 3 223446778
Q ss_pred CccEEEecccccCCCCHHHHHHHHHHHHHHh
Q 008319 399 GADAVMLSGETAHGKFPLKAVKVMHTVALRT 429 (570)
Q Consensus 399 G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~a 429 (570)
|+|.|=-|.-=.-|.--++.|+.|.+.+++.
T Consensus 185 GADfVKTSTGf~~~gAT~edv~lm~~~v~~~ 215 (281)
T 2a4a_A 185 NADFIKTSTGKVQINATPSSVEYIIKAIKEY 215 (281)
T ss_dssp TCSEEECCCSCSSCCCCHHHHHHHHHHHHHH
T ss_pred CCCEEEeCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 9999876522112334578999999998765
No 244
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=47.74 E-value=1e+02 Score=29.13 Aligned_cols=38 Identities=3% Similarity=-0.137 Sum_probs=27.1
Q ss_pred HHhhhhhhcCCcEEEecC---CCChhHHHHHHHHHHhcCCCc
Q 008319 271 EDIKFGVDNQVDFYAVSF---VKDAKVVHELKDYLKSCNADI 309 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~Sf---V~sa~dv~~vr~~l~~~~~~i 309 (570)
+.++.+.+.|+|+|-+.. -.+. ++.++++.+++.|-.+
T Consensus 27 ~~l~~a~~~G~~~vEl~~~~~~~~~-~~~~~~~~l~~~gl~i 67 (264)
T 1yx1_A 27 SFLPLLAMAGAQRVELREELFAGPP-DTEALTAAIQLQGLEC 67 (264)
T ss_dssp GGHHHHHHHTCSEEEEEGGGCSSCC-CHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHcCCCEEEEEHHhcCCCH-HHHHHHHHHHHcCCEE
Confidence 456777889999987752 2223 7888999998877543
No 245
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=46.36 E-value=1.3e+02 Score=29.96 Aligned_cols=123 Identities=8% Similarity=0.049 Sum_probs=72.1
Q ss_pred HHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHHhhcCCCC
Q 008319 356 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPV 435 (570)
Q Consensus 356 ~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~~~~ 435 (570)
-+...|+..|.++++. .|.......+...-..|++.+...++. .| .++.+...+++.+-...++.
T Consensus 81 alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~~---~~-~~~~~~a~~~~~~~~~~~~i 145 (322)
T 1z7w_A 81 GLAFTAAAKGYKLIIT-----------MPASMSTERRIILLAFGVELVLTDPAK---GM-KGAIAKAEEILAKTPNGYML 145 (322)
T ss_dssp HHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCTTEEEC
T ss_pred HHHHHHHHcCCCEEEE-----------eCCCCCHHHHHHHHHcCCEEEEeCCCC---CH-HHHHHHHHHHHHhCCCeEeC
Confidence 4667788999998874 121122234556667899987764321 12 35677666665554222221
Q ss_pred CCCCCCcccCCCCChhHHHHHHHHHHHhhcC--C-cEEEEcCChHHHHHHHh----cCCCCeEEEEeCCHH
Q 008319 436 SITPPTQFSAHKSHMGDMFAFHSTTMANTLN--T-PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQER 499 (570)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~--a-~Iiv~T~sG~tA~~ls~----~RP~~pIiavt~~~~ 499 (570)
.+ |.+.. .+..-....+.++.++++ . .||+.+-+|.++.-+++ ..|.+.|+++.+...
T Consensus 146 ~~-~~n~~-----~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~ 210 (322)
T 1z7w_A 146 QQ-FENPA-----NPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVES 210 (322)
T ss_dssp CT-TTCTH-----HHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGG
T ss_pred CC-CCChh-----HHHHHHHHHHHHHHHHhcCCCCEEEEecCccHhHHHHHHHHHHcCCCCEEEEEecCCC
Confidence 11 11100 011111223456777774 4 79999999999877765 469999999998654
No 246
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=46.26 E-value=1.5e+02 Score=29.35 Aligned_cols=120 Identities=10% Similarity=0.113 Sum_probs=71.6
Q ss_pred HHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHHhhcCCCC
Q 008319 356 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPV 435 (570)
Q Consensus 356 ~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~~~~ 435 (570)
-+...|+..|.++.+.. |.......+...-..|++.+....+. .| -++.+...+++.+-...++.
T Consensus 81 alA~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~Ga~v~~~~~~~---~~-~~~~~~a~~l~~~~~~~~~~ 145 (313)
T 2q3b_A 81 ALAMVCAARGYRCVLTM-----------PETMSLERRMLLRAYGAELILTPGAD---GM-SGAIAKAEELAKTDQRYFVP 145 (313)
T ss_dssp HHHHHHHHHTCEEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCTTEECC
T ss_pred HHHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHHCCCEEEEeCCCC---CH-HHHHHHHHHHHHhCCCEEeC
Confidence 36677889999988741 11111223455667899988876431 12 35666666665543221111
Q ss_pred CCCCCCcccCCCCChhHH---HHHHHHHHHhhcC--C-cEEEEcCChHHHHHHHh----cCCCCeEEEEeCCHH
Q 008319 436 SITPPTQFSAHKSHMGDM---FAFHSTTMANTLN--T-PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQER 499 (570)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~---ia~~av~~a~~~~--a-~Iiv~T~sG~tA~~ls~----~RP~~pIiavt~~~~ 499 (570)
.+ |. ++... ....+.++.++++ . .||+.+-+|.++.-+++ ..|...||++.+...
T Consensus 146 ~~-~~--------n~~~~~~~~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~ 210 (313)
T 2q3b_A 146 QQ-FE--------NPANPAIHRVTTAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAAS 210 (313)
T ss_dssp CT-TT--------CTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTS
T ss_pred CC-CC--------ChhhHHHHHHHHHHHHHHHcCCCCCEEEEccCcchhHHHHHHHHHHhCCCCEEEEEeeCCC
Confidence 11 11 11111 1222567777774 4 79999999999877665 469999999988643
No 247
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=46.04 E-value=51 Score=41.93 Aligned_cols=121 Identities=14% Similarity=0.079 Sum_probs=73.2
Q ss_pred HHHhhhhhhcCCcE--EEecCCCChhHHHHHHHHHHhcCCCceEEEeecCc-chhhhHHHHHHh-CCEEE---EcCCCcc
Q 008319 270 WEDIKFGVDNQVDF--YAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESA-DSIPNLHSIISA-SDGAM---VARGDLG 342 (570)
Q Consensus 270 ~~dI~~~~~~gvd~--I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~-~gv~NldeIl~~-sDgIm---IgrGDLg 342 (570)
.+.++.+++.|++. |..++-.- ...++.+++++. .+.++..+-+. ++.+....+.+. +|+|+ +--+|=|
T Consensus 656 ~~~~~~~~~~gv~i~gv~~~~G~p--~~e~~~~~l~~~--gi~~i~~v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~eaG 731 (2060)
T 2uva_G 656 IPLLGRLRADGVPIEGLTIGAGVP--SIEVANEYIQTL--GIRHISFKPGSVDAIQQVINIAKANPTFPIILQWTGGRGG 731 (2060)
T ss_dssp HHHHHHHHTTTCCEEEEEEESSCC--CHHHHHHHHHHS--CCSEEEECCCSHHHHHHHHHHHHHCTTSCEEEEECCTTSS
T ss_pred HHHHHHHHHcCCCcceEeecCCCC--CHHHHHHHHHHc--CCeEEEecCCHHHHHHHHHHHHHcCCCEEEEeeeEcccCC
Confidence 36677788999998 77765431 222355677665 45566655443 233333344555 89888 5545655
Q ss_pred cCCCCCCHHHHHHHHHHHHHHc-CCCEEEEccchhhhhcCCCcChHHHhHHHHHH-----------HhCccEEEec
Q 008319 343 AELPIEDVPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAV-----------REGADAVMLS 406 (570)
Q Consensus 343 ~eig~~~v~~~qk~Ii~~c~~~-gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav-----------~~G~D~vmLs 406 (570)
-..|.+++..-.-.++...+++ +.|+|.|. ..- .-.|++.++ ..|+|+|++-
T Consensus 732 GH~g~~d~~~~~l~lv~~i~~~~~ipviaaG---------GI~---~g~~i~aaltg~ws~~~g~palGAdgV~~G 795 (2060)
T 2uva_G 732 GHHSFEDFHQPILLMYSRIRKCSNIVLVAGS---------GFG---GSEDTYPYLTGSWSTKFGYPPMPFDGCMFG 795 (2060)
T ss_dssp SSCCSCCSHHHHHHHHHHHHTSTTEEEEEES---------SCC---SHHHHHHHHHTCGGGTTTSCCCCCSCEEES
T ss_pred CCCCcccccchHHHHHHHHHHHcCCCEEEeC---------CCC---CHHHHHHHhcCcchhhcCCCCCCCCEEEEc
Confidence 5656544333333455555544 78888763 332 345788899 9999999863
No 248
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=45.96 E-value=2.3e+02 Score=28.42 Aligned_cols=124 Identities=19% Similarity=0.107 Sum_probs=65.0
Q ss_pred cccCCCccCCCCCChhhHHHhhhhhhcCC-cEEEecCCCChhHHHHHHHHHHhcCCCceEEEee--cCcchhhhHHHHHH
Q 008319 253 LNVRGKSANLPSITDKDWEDIKFGVDNQV-DFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI--ESADSIPNLHSIIS 329 (570)
Q Consensus 253 In~p~~~~~lp~lt~kD~~dI~~~~~~gv-d~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKI--Et~~gv~NldeIl~ 329 (570)
+..|=..-++..++ +.+....+.+.|. .++...++ +++.+.+.-+.+.+.- +.++.+.+ -++.--+.++...+
T Consensus 11 ~~~Pii~apM~g~s--~~~la~av~~aG~lG~i~~~~~-~~~~~~~~i~~i~~~~-~~p~gvnl~~~~~~~~~~~~~a~~ 86 (332)
T 2z6i_A 11 IDYPIFQGGMAWVA--DGDLAGAVSKAGGLGIIGGGNA-PKEVVKANIDKIKSLT-DKPFGVNIMLLSPFVEDIVDLVIE 86 (332)
T ss_dssp CSSSEEECCCTTTC--CHHHHHHHHHHTSBEEEECTTC-CHHHHHHHHHHHHHHC-CSCEEEEECTTSTTHHHHHHHHHH
T ss_pred CCCCEEeCCCCCCC--cHHHHHHHHhCCCcEEeCCCCC-CHHHHHHHHHHHHHhc-CCCEEEEecCCCCCHHHHHHHHHH
Confidence 33443333444444 3445555666675 67766665 5555543323333221 22223332 23321222333334
Q ss_pred h-CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecc
Q 008319 330 A-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (570)
Q Consensus 330 ~-sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (570)
. .|+|.++-|. | ..+++.+++.|.|++.-. .+. .+...+...|+|++.+++
T Consensus 87 ~g~d~V~~~~g~-----p--------~~~i~~l~~~g~~v~~~v-----------~~~---~~a~~~~~~GaD~i~v~g 138 (332)
T 2z6i_A 87 EGVKVVTTGAGN-----P--------SKYMERFHEAGIIVIPVV-----------PSV---ALAKRMEKIGADAVIAEG 138 (332)
T ss_dssp TTCSEEEECSSC-----G--------GGTHHHHHHTTCEEEEEE-----------SSH---HHHHHHHHTTCSCEEEEC
T ss_pred CCCCEEEECCCC-----h--------HHHHHHHHHcCCeEEEEe-----------CCH---HHHHHHHHcCCCEEEEEC
Confidence 4 8999987542 2 235666777899988631 122 234456788999999965
No 249
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=45.67 E-value=2.2e+02 Score=27.66 Aligned_cols=91 Identities=16% Similarity=0.216 Sum_probs=48.6
Q ss_pred HHHhhhhhhcCCcEE--EecCCC---ChhHHH-----------------HHHHHHHhcCCCceEEEee-cCc---chhhh
Q 008319 270 WEDIKFGVDNQVDFY--AVSFVK---DAKVVH-----------------ELKDYLKSCNADIHVIVKI-ESA---DSIPN 323 (570)
Q Consensus 270 ~~dI~~~~~~gvd~I--~~SfV~---sa~dv~-----------------~vr~~l~~~~~~i~IiaKI-Et~---~gv~N 323 (570)
.+.++...+.|+|+| .+||.. +...+. ++-+.+++.+.+++++.+. .++ .|+++
T Consensus 34 ~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~~g~~~ 113 (268)
T 1qop_A 34 LKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVFNNGIDA 113 (268)
T ss_dssp HHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHHTTCHHH
T ss_pred HHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHHHhhHHH
Confidence 345555567899986 556631 111222 1112233332356676654 332 13333
Q ss_pred H-HHHHHh-CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEE
Q 008319 324 L-HSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 370 (570)
Q Consensus 324 l-deIl~~-sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPviv 370 (570)
+ ++..+. +||+++. |+.. ++ .++.+..|+++|...+.
T Consensus 114 ~~~~~~~aGadgii~~--d~~~----e~----~~~~~~~~~~~g~~~i~ 152 (268)
T 1qop_A 114 FYARCEQVGVDSVLVA--DVPV----EE----SAPFRQAALRHNIAPIF 152 (268)
T ss_dssp HHHHHHHHTCCEEEET--TCCG----GG----CHHHHHHHHHTTCEEEC
T ss_pred HHHHHHHcCCCEEEEc--CCCH----HH----HHHHHHHHHHcCCcEEE
Confidence 3 344444 8999994 5543 22 45677889999987654
No 250
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=45.48 E-value=68 Score=31.88 Aligned_cols=97 Identities=20% Similarity=0.172 Sum_probs=57.4
Q ss_pred HHhhhhhhcCCcEEEec------CCCCh-hHHHHHHHHHHhcCCCceEEEeec---CcchhhhHHHHHHh-CCEEEEcCC
Q 008319 271 EDIKFGVDNQVDFYAVS------FVKDA-KVVHELKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S------fV~sa-~dv~~vr~~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDgImIgrG 339 (570)
+.+++-++.|+|++.+. +.-+. |..+-++...+..+.+++||+-+= |.++++.....-+. +|++++-+-
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (291)
T 3a5f_A 26 ELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITP 105 (291)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 45567789999998763 22333 333334445555566889999884 46666666665555 899998654
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
.+.- +.-..+.+..-..|.+.+.|+++.
T Consensus 106 ~y~~----~s~~~l~~~f~~ia~a~~lPiilY 133 (291)
T 3a5f_A 106 YYNK----TTQKGLVKHFKAVSDAVSTPIIIY 133 (291)
T ss_dssp CSSC----CCHHHHHHHC-CTGGGCCSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 3321 111222222223455668999874
No 251
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=45.34 E-value=1.5e+02 Score=29.18 Aligned_cols=121 Identities=12% Similarity=0.020 Sum_probs=71.0
Q ss_pred HHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHHhhcCCCC
Q 008319 356 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPV 435 (570)
Q Consensus 356 ~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~~~~ 435 (570)
-+...|+..|.++.+. .|.......+...-..|++.+....+ |. .-++.+...+++.+.+.. +.
T Consensus 75 a~A~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~Ga~v~~~~~~---~~-~~~~~~~a~~~~~~~~~~-~~ 138 (303)
T 2v03_A 75 ALAMIAALKGYRMKLL-----------MPDNMSQERRAAMRAYGAELILVTKE---QG-MEGARDLALEMANRGEGK-LL 138 (303)
T ss_dssp HHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECTT---TH-HHHHHHHHHHHHHTTSCE-EC
T ss_pred HHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHcCCEEEEECCC---CC-HHHHHHHHHHHHHhCCCc-cc
Confidence 5667788999998874 12112223455666789998887642 22 335666655555442222 11
Q ss_pred CCCCCCcccCCCCChhH-HHHHHHHHHHhhcC--C-cEEEEcCChHHHHHHHh----cCCCCeEEEEeCCHH
Q 008319 436 SITPPTQFSAHKSHMGD-MFAFHSTTMANTLN--T-PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQER 499 (570)
Q Consensus 436 ~~~~~~~~~~~~~~~~~-~ia~~av~~a~~~~--a-~Iiv~T~sG~tA~~ls~----~RP~~pIiavt~~~~ 499 (570)
.+ |.+. .... -....+.++.++++ . .||+.+-+|.++.-+++ ..|...|+++.+...
T Consensus 139 ~~-~~n~------~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~ 203 (303)
T 2v03_A 139 DQ-FNNP------DNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEG 203 (303)
T ss_dssp CT-TTCT------HHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEECTT
T ss_pred CC-cCCh------hhHHHhcCCcHHHHHHHhCCCCCEEEEEeCccHhHHHHHHHHHHhCCCCEEEEEcCCCC
Confidence 11 1110 0011 11223456777765 4 79999999999877765 369999999998643
No 252
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=45.25 E-value=1.4e+02 Score=27.91 Aligned_cols=40 Identities=13% Similarity=0.305 Sum_probs=27.8
Q ss_pred HHhhhhhhcCCcEEEec-CCC-----ChhHHHHHHHHHHhcCCCce
Q 008319 271 EDIKFGVDNQVDFYAVS-FVK-----DAKVVHELKDYLKSCNADIH 310 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S-fV~-----sa~dv~~vr~~l~~~~~~i~ 310 (570)
+.++.+.+.|+|+|-+. .-. +..++.++++.+++.|-.+.
T Consensus 18 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~ 63 (278)
T 1i60_A 18 LDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPL 63 (278)
T ss_dssp HHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEEE
T ss_pred HHHHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCCee
Confidence 45677788999999887 321 33567788888887765543
No 253
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=45.11 E-value=1.2e+02 Score=32.06 Aligned_cols=124 Identities=10% Similarity=0.068 Sum_probs=73.1
Q ss_pred HHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHHhhcCCC
Q 008319 355 EDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLP 434 (570)
Q Consensus 355 k~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~~~ 434 (570)
.-+...|+..|.++.+. .|..+....+...-..|++.+....+. .| -++++...+++.+-+..++
T Consensus 188 ~AlA~aAa~~Gl~~~Iv-----------mP~~~s~~k~~~~r~~GAeVv~v~~~~---~~-~~a~~~a~el~~~~~~~~~ 252 (430)
T 4aec_A 188 IGLAFIAASRGYRLILT-----------MPASMSMERRVLLKAFGAELVLTDPAK---GM-TGAVQKAEEILKNTPDAYM 252 (430)
T ss_dssp HHHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHSTTEEE
T ss_pred HHHHHHHHHhCCEEEEE-----------EcCCCCHHHHHHHHHCCCEEEEECCCC---Ch-HHHHHHHHHHHHhcCCcEE
Confidence 35566799999998874 122223344556677899988875432 12 3566666666554322222
Q ss_pred CCCCCCCcccCCCCChhHHHHHHHHHHHhhcC--C-cEEEEcCChHHHHHHHh----cCCCCeEEEEeCCHH
Q 008319 435 VSITPPTQFSAHKSHMGDMFAFHSTTMANTLN--T-PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQER 499 (570)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~--a-~Iiv~T~sG~tA~~ls~----~RP~~pIiavt~~~~ 499 (570)
..+ |.+.. .+..-..-.+.++.++++ . .||+..-+|.++--+++ ..|.+.||++.+...
T Consensus 253 i~~-~~np~-----~~~aG~~T~a~EI~eQl~~~~D~vVvpvG~GGtlaGi~~~lk~~~p~~kVigVep~~s 318 (430)
T 4aec_A 253 LQQ-FDNPA-----NPKIHYETTGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTES 318 (430)
T ss_dssp CCT-TTCTH-----HHHHHHHTHHHHHHHHTTSCEEEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGG
T ss_pred ecC-CCCcc-----HHHHHHHHHHHHHHHHcCCCCCEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEEeCCC
Confidence 211 11100 011112233456777764 3 78889999988777665 489999999987543
No 254
>1ko7_A HPR kinase/phosphatase; protein kinase, phosphotransfer, protein phosphatase, dual activity, product, substrate, transferase, hydrolase; 1.95A {Staphylococcus xylosus} SCOP: c.98.2.1 c.91.1.2
Probab=44.59 E-value=23 Score=36.26 Aligned_cols=85 Identities=16% Similarity=0.293 Sum_probs=59.1
Q ss_pred CceEEEeecCc--------chhhhHHHHHHh-CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhh
Q 008319 308 DIHVIVKIESA--------DSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESM 378 (570)
Q Consensus 308 ~i~IiaKIEt~--------~gv~NldeIl~~-sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM 378 (570)
+++++++.|+. .-.+.++.++.. ...|++.|||+- -+.+++.|++.|.|++.
T Consensus 49 RVQi~Gn~E~~yL~~L~~e~~~~rler~l~~~~P~IIltrg~~~-----------peelie~A~~~~IPVL~-------- 109 (314)
T 1ko7_A 49 RIQLLGTTELSFYNLLPDEERKGRMRKLCRPETPAIIVTRDLEP-----------PEELIEAAKEHETPLIT-------- 109 (314)
T ss_dssp SEEEECHHHHHHHHHSCHHHHTTHHHHHCCTTCCCEEECTTCCC-----------CHHHHHHHHHTTCCEEE--------
T ss_pred cEEEEechhHHHHHhcCHHHHHHHHHHHhcCCCCEEEEeCCCCC-----------CHHHHHHHHHCCCeEEE--------
Confidence 67788877762 122445555543 679999999983 23588999999999885
Q ss_pred hcCCCcChHHHhHHHHHHHh---------------CccEEEecccccCCC
Q 008319 379 IDHPTPTRAEVSDIAIAVRE---------------GADAVMLSGETAHGK 413 (570)
Q Consensus 379 ~~~~~PtrAEv~Dv~nav~~---------------G~D~vmLs~ETA~G~ 413 (570)
.+.+|-.-+..+.+++.. +--++++.|++-.||
T Consensus 110 --T~~~ts~~~~~l~~~l~~~~~~~~~~H~~~v~~~g~~vl~~G~sG~GK 157 (314)
T 1ko7_A 110 --SKIATTQLMSRLTTFLEHELARTTSLHGVLVDVYGVGVLITGDSGIGK 157 (314)
T ss_dssp --CCSCHHHHHHHHHHHHHHHTCEEEEEESEEEEETTEEEEEEESTTSSH
T ss_pred --ECCchhHHHHHHHHHHHHhhccceeeeEEEEEECCEEEEEEeCCCCCH
Confidence 234444446666677665 235899999999998
No 255
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=44.48 E-value=97 Score=30.26 Aligned_cols=118 Identities=18% Similarity=0.109 Sum_probs=65.8
Q ss_pred HHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHhCCEEE-E-cCCCc-ccCCCC
Q 008319 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAM-V-ARGDL-GAELPI 347 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDgIm-I-grGDL-g~eig~ 347 (570)
+.++.+.+.|+|+|.++-.. .+++..+.+++++.|.+ .+.-+.-....+.+++|++.++|.+ + ..-.. |..-+.
T Consensus 113 ~~~~~~~~aGadgii~~d~~-~e~~~~~~~~~~~~g~~--~i~l~~p~t~~~~i~~i~~~~~g~v~~~s~~G~tG~~~~~ 189 (268)
T 1qop_A 113 AFYARCEQVGVDSVLVADVP-VEESAPFRQAALRHNIA--PIFICPPNADDDLLRQVASYGRGYTYLLSRSGVTGAENRG 189 (268)
T ss_dssp HHHHHHHHHTCCEEEETTCC-GGGCHHHHHHHHHTTCE--EECEECTTCCHHHHHHHHHHCCSCEEEESSSSCCCSSSCC
T ss_pred HHHHHHHHcCCCEEEEcCCC-HHHHHHHHHHHHHcCCc--EEEEECCCCCHHHHHHHHhhCCCcEEEEecCCcCCCccCC
Confidence 44555667899998888554 35677777888776644 2333322245578889998877432 2 21111 111111
Q ss_pred -CCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 348 -EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 348 -~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
+.+....+++-+ ..+.|+++. ...-|. .++..++..|+|+++.-
T Consensus 190 ~~~~~~~i~~lr~---~~~~pi~vg---------gGI~t~---e~~~~~~~agAD~vVVG 234 (268)
T 1qop_A 190 ALPLHHLIEKLKE---YHAAPALQG---------FGISSP---EQVSAAVRAGAAGAISG 234 (268)
T ss_dssp --CCHHHHHHHHH---TTCCCEEEE---------SSCCSH---HHHHHHHHTTCSEEEEC
T ss_pred CchHHHHHHHHHh---ccCCcEEEE---------CCCCCH---HHHHHHHHcCCCEEEEC
Confidence 122222222222 237898864 222222 24667789999999974
No 256
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=44.12 E-value=53 Score=31.72 Aligned_cols=54 Identities=11% Similarity=0.084 Sum_probs=41.9
Q ss_pred HHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHH
Q 008319 354 QEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVAL 427 (570)
Q Consensus 354 qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~ 427 (570)
-+..++.++++|++|.+=|- . +..+...++..|+|+|+- +||..+.+++.++-.
T Consensus 193 ~~~~v~~~~~~G~~V~~WTv--------n-----~~~~~~~l~~~GVDgIiT-------D~P~~~~~~~~~~~~ 246 (250)
T 3ks6_A 193 DAGLMAQVQAAGLDFGCWAA--------H-----TPSQITKALDLGVKVFTT-------DRPTLAIALRTEHRM 246 (250)
T ss_dssp CHHHHHHHHHTTCEEEEECC--------C-----SHHHHHHHHHHTCSEEEE-------SCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEEEEeC--------C-----CHHHHHHHHHcCCCEEEc-------CCHHHHHHHHHHhhc
Confidence 46889999999999998651 1 123566788999999986 699999888876643
No 257
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=44.04 E-value=94 Score=30.35 Aligned_cols=117 Identities=17% Similarity=0.213 Sum_probs=64.5
Q ss_pred HHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHhCCEEEE--cCCC-cccCCCC
Q 008319 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMV--ARGD-LGAELPI 347 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDgImI--grGD-Lg~eig~ 347 (570)
+.++.+.+.|+|++.++=. ..+++..+.+++++.|-+ ++.-+.-....+.+.+|.+.++|.+. +.-+ -|..-
T Consensus 113 ~f~~~~~~aG~dgvii~dl-~~ee~~~~~~~~~~~gl~--~i~l~~p~t~~~rl~~ia~~a~gfiy~vs~~g~TG~~~-- 187 (262)
T 2ekc_A 113 KFCRLSREKGIDGFIVPDL-PPEEAEELKAVMKKYVLS--FVPLGAPTSTRKRIKLICEAADEMTYFVSVTGTTGARE-- 187 (262)
T ss_dssp HHHHHHHHTTCCEEECTTC-CHHHHHHHHHHHHHTTCE--ECCEECTTCCHHHHHHHHHHCSSCEEEESSCC--------
T ss_pred HHHHHHHHcCCCEEEECCC-CHHHHHHHHHHHHHcCCc--EEEEeCCCCCHHHHHHHHHhCCCCEEEEecCCccCCCC--
Confidence 4455566889999988744 236677777777776644 33333332445688899988765432 2111 11111
Q ss_pred CCHH-HHHHHHHHHHHHc-CCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 348 EDVP-LLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 348 ~~v~-~~qk~Ii~~c~~~-gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
... .-....++..++. +.|+.+. ...-|.. ++.. +..|+|+++..
T Consensus 188 -~~~~~~~~~~v~~vr~~~~~pv~vG---------~GI~t~e---~~~~-~~~gADgvIVG 234 (262)
T 2ekc_A 188 -KLPYERIKKKVEEYRELCDKPVVVG---------FGVSKKE---HARE-IGSFADGVVVG 234 (262)
T ss_dssp ----CHHHHHHHHHHHHHCCSCEEEE---------SSCCSHH---HHHH-HHTTSSEEEEC
T ss_pred -CcCcccHHHHHHHHHhhcCCCEEEe---------CCCCCHH---HHHH-HHcCCCEEEEC
Confidence 121 2223445555544 7898864 2232222 3444 78899999974
No 258
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=43.99 E-value=2e+02 Score=29.12 Aligned_cols=128 Identities=17% Similarity=0.195 Sum_probs=67.0
Q ss_pred CCChhhHHHh--------hhhhhcCCcEEEecCC-------------CChh---------H---HHHHHHHHHhcCCCce
Q 008319 264 SITDKDWEDI--------KFGVDNQVDFYAVSFV-------------KDAK---------V---VHELKDYLKSCNADIH 310 (570)
Q Consensus 264 ~lt~kD~~dI--------~~~~~~gvd~I~~SfV-------------~sa~---------d---v~~vr~~l~~~~~~i~ 310 (570)
.||..|++.+ +.+.+.|+|+|=+-.- +... + +.++-+.+.+.= +..
T Consensus 133 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v-~~p 211 (340)
T 3gr7_A 133 EMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW-DGP 211 (340)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc-CCc
Confidence 6888888777 3456789999865432 2111 1 122222222222 667
Q ss_pred EEEeecCcc------hhhhHHHHHHh-----CCEEEEcCCCcccC-CCCCCHHHHHHHHHHHHH-HcCCCEEEEccchhh
Q 008319 311 VIVKIESAD------SIPNLHSIISA-----SDGAMVARGDLGAE-LPIEDVPLLQEDIIRRCR-SMQKPVIVATNMLES 377 (570)
Q Consensus 311 IiaKIEt~~------gv~NldeIl~~-----sDgImIgrGDLg~e-ig~~~v~~~qk~Ii~~c~-~~gKPvivaTqmLeS 377 (570)
|..||---+ .+++.-++++. +|.|-+.-|.+.-. ++.. +..+...++..+ ..+.||+....
T Consensus 212 v~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~--~~~~~~~~~~ik~~~~iPVi~~Gg---- 285 (340)
T 3gr7_A 212 LFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVY--PGYQVPFAELIRREADIPTGAVGL---- 285 (340)
T ss_dssp EEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCC--TTTTHHHHHHHHHHTTCCEEEESS----
T ss_pred eEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCC--ccccHHHHHHHHHHcCCcEEeeCC----
Confidence 888884321 23344444443 79998864433211 1111 111223333333 35899987432
Q ss_pred hhcCCCcChHHHhHHHHHHHhC-ccEEEec
Q 008319 378 MIDHPTPTRAEVSDIAIAVREG-ADAVMLS 406 (570)
Q Consensus 378 M~~~~~PtrAEv~Dv~nav~~G-~D~vmLs 406 (570)
.-+. .+...++..| +|.|++.
T Consensus 286 -----I~s~---e~a~~~L~~G~aD~V~iG 307 (340)
T 3gr7_A 286 -----ITSG---WQAEEILQNGRADLVFLG 307 (340)
T ss_dssp -----CCCH---HHHHHHHHTTSCSEEEEC
T ss_pred -----CCCH---HHHHHHHHCCCeeEEEec
Confidence 2222 2345678888 9999985
No 259
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=43.93 E-value=1.2e+02 Score=31.91 Aligned_cols=70 Identities=16% Similarity=0.358 Sum_probs=45.4
Q ss_pred HHHHHHh-CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHh-Cc-
Q 008319 324 LHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE-GA- 400 (570)
Q Consensus 324 ldeIl~~-sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~-G~- 400 (570)
+|.+.+. +|.+=||-+|+. +++ +++.+.+.|||||+.|-| -|.+|+...++++.. |.
T Consensus 127 vd~l~~~~vd~~KIgS~~~~------N~p-----LL~~va~~gKPViLStGm---------aTl~Ei~~Ave~i~~~Gn~ 186 (385)
T 1vli_A 127 ADLLQSTSPSAFKIASYEIN------HLP-----LLKYVARLNRPMIFSTAG---------AEISDVHEAWRTIRAEGNN 186 (385)
T ss_dssp HHHHHTTCCSCEEECGGGTT------CHH-----HHHHHHTTCSCEEEECTT---------CCHHHHHHHHHHHHTTTCC
T ss_pred HHHHHhcCCCEEEECccccc------CHH-----HHHHHHhcCCeEEEECCC---------CCHHHHHHHHHHHHHCCCC
Confidence 3333444 688888877774 232 456667789999987664 367888888888874 55
Q ss_pred cEEEecccccCCCCHH
Q 008319 401 DAVMLSGETAHGKFPL 416 (570)
Q Consensus 401 D~vmLs~ETA~G~yP~ 416 (570)
+.++|- -+-.||.
T Consensus 187 ~iiLlh---c~s~YPt 199 (385)
T 1vli_A 187 QIAIMH---CVAKYPA 199 (385)
T ss_dssp CEEEEE---ECSSSSC
T ss_pred cEEEEe---ccCCCCC
Confidence 666663 2334653
No 260
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=43.70 E-value=1.2e+02 Score=28.58 Aligned_cols=88 Identities=6% Similarity=-0.011 Sum_probs=57.1
Q ss_pred HHhhhhhhcCCcEEEecCC-----CChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-----CCEEEEcCCC
Q 008319 271 EDIKFGVDNQVDFYAVSFV-----KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-----SDGAMVARGD 340 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV-----~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-----sDgImIgrGD 340 (570)
+.++.+.+.|+|+|-+... .+.+++.++++.+++.|-.+..+.-- ....++.++..++. ++.|.+.+|
T Consensus 34 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~-~~~~~~~~~~~i~~A~~lGa~~v~~~p~- 111 (257)
T 3lmz_A 34 TTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPI-YMKSEEEIDRAFDYAKRVGVKLIVGVPN- 111 (257)
T ss_dssp HHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEE-EECSHHHHHHHHHHHHHHTCSEEEEEEC-
T ss_pred HHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEecc-ccCCHHHHHHHHHHHHHhCCCEEEecCC-
Confidence 5567788999999977643 36788899999999887654433211 11344555554443 567776554
Q ss_pred cccCCCCCCHHHHHHHHHHHHHHcCCCEEE
Q 008319 341 LGAELPIEDVPLLQEDIIRRCRSMQKPVIV 370 (570)
Q Consensus 341 Lg~eig~~~v~~~qk~Ii~~c~~~gKPviv 370 (570)
....+++.+.|.++|..+.+
T Consensus 112 ----------~~~l~~l~~~a~~~gv~l~l 131 (257)
T 3lmz_A 112 ----------YELLPYVDKKVKEYDFHYAI 131 (257)
T ss_dssp ----------GGGHHHHHHHHHHHTCEEEE
T ss_pred ----------HHHHHHHHHHHHHcCCEEEE
Confidence 12346778888888887664
No 261
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=43.63 E-value=39 Score=33.00 Aligned_cols=54 Identities=19% Similarity=0.244 Sum_probs=34.1
Q ss_pred CCCHHHHHHHH-HhCCcEEEEecCCC---------ChHHHHHHHHHHHHHHhhcCCCcEEEEeecCC
Q 008319 111 TSSREMIWKLA-EEGMNVARLNMSHG---------DHASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (570)
Q Consensus 111 ~~~~e~l~~li-~~Gm~v~RiN~sHg---------~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~G 167 (570)
.-+.+.++.|. +.|+|++|+-+... +++...+.++.+=+...+.+ +.+++|+-+
T Consensus 38 ~~~~~di~~~~~~~G~N~vRi~~~~~~~~~~~~~~~p~~~~~~ld~~v~~a~~~G---i~vild~h~ 101 (293)
T 1tvn_A 38 FYTAETVAKAKTEFNATLIRAAIGHGTSTGGSLNFDWEGNMSRLDTVVNAAIAED---MYVIIDFHS 101 (293)
T ss_dssp GCSHHHHHHHHHHHCCSEEEEEEECCTTSTTSTTTCHHHHHHHHHHHHHHHHHTT---CEEEEEEEC
T ss_pred CCCHHHHHHHHHhcCCCEEEEeccccCCCCCccccChHHHHHHHHHHHHHHHHCC---CEEEEEcCC
Confidence 34688999999 49999999988752 22333344444333334444 667788654
No 262
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=43.59 E-value=38 Score=33.83 Aligned_cols=66 Identities=11% Similarity=0.067 Sum_probs=42.1
Q ss_pred hHHHhhhhhhcCCcEEEecCCC--C-hhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHH---h-CCEEEEcC
Q 008319 269 DWEDIKFGVDNQVDFYAVSFVK--D-AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS---A-SDGAMVAR 338 (570)
Q Consensus 269 D~~dI~~~~~~gvd~I~~SfV~--s-a~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~---~-sDgImIgr 338 (570)
+.++++.+++.|+|+|++.... + .-|+....++......++.+|+ |+ |+.+.+++.. . +||+.||.
T Consensus 178 ~~eEl~~A~~~ga~iIGinnr~l~t~~~dl~~~~~L~~~ip~~~~vIa--es--GI~t~edv~~l~~~Ga~gvLVG~ 250 (272)
T 3tsm_A 178 DEAEMERALKLSSRLLGVNNRNLRSFEVNLAVSERLAKMAPSDRLLVG--ES--GIFTHEDCLRLEKSGIGTFLIGE 250 (272)
T ss_dssp SHHHHHHHTTSCCSEEEEECBCTTTCCBCTHHHHHHHHHSCTTSEEEE--ES--SCCSHHHHHHHHTTTCCEEEECH
T ss_pred CHHHHHHHHhcCCCEEEECCCCCccCCCChHHHHHHHHhCCCCCcEEE--EC--CCCCHHHHHHHHHcCCCEEEEcH
Confidence 5677888889999999887322 1 1134455555555445666666 33 6655555544 3 89999983
No 263
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=43.50 E-value=2.6e+02 Score=27.81 Aligned_cols=121 Identities=15% Similarity=0.058 Sum_probs=65.2
Q ss_pred CCCCCChhhHHHhhhhhhcCC-cEEEecCCCChhHHHHHHHHHHhc-CCC--ceEEEe--ecCcchhhhHHHHHHh-CCE
Q 008319 261 NLPSITDKDWEDIKFGVDNQV-DFYAVSFVKDAKVVHELKDYLKSC-NAD--IHVIVK--IESADSIPNLHSIISA-SDG 333 (570)
Q Consensus 261 ~lp~lt~kD~~dI~~~~~~gv-d~I~~SfV~sa~dv~~vr~~l~~~-~~~--i~IiaK--IEt~~gv~NldeIl~~-sDg 333 (570)
++..++ +.++...+.+.|. .++......+++++.+.-+.+.+. +.. +.++.. +..+.--+.++.+++. +|+
T Consensus 22 pM~gvs--~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~ 99 (328)
T 2gjl_A 22 GMQWVG--RAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRV 99 (328)
T ss_dssp CCTTTC--SHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCE
T ss_pred CCCCCC--cHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHHHHHHhcCCCE
Confidence 333444 3445555556665 444444455677765432323322 222 333332 0023323445555555 899
Q ss_pred EEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEeccccc
Q 008319 334 AMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETA 410 (570)
Q Consensus 334 ImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA 410 (570)
|.++-|+ | .++++.+++.|.|++... .+. .+...+...|+|++.+.+=++
T Consensus 100 V~~~~g~-----p--------~~~~~~l~~~gi~vi~~v-----------~t~---~~a~~~~~~GaD~i~v~g~~~ 149 (328)
T 2gjl_A 100 VETAGND-----P--------GEHIAEFRRHGVKVIHKC-----------TAV---RHALKAERLGVDAVSIDGFEC 149 (328)
T ss_dssp EEEEESC-----C--------HHHHHHHHHTTCEEEEEE-----------SSH---HHHHHHHHTTCSEEEEECTTC
T ss_pred EEEcCCC-----c--------HHHHHHHHHcCCCEEeeC-----------CCH---HHHHHHHHcCCCEEEEECCCC
Confidence 9987332 2 356777888899988521 122 234567889999999966433
No 264
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=43.31 E-value=2.3e+02 Score=29.20 Aligned_cols=111 Identities=16% Similarity=0.211 Sum_probs=71.1
Q ss_pred HHhhhhhhcCCcEEEecCC--C---------ChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHhCCEEEEcCC
Q 008319 271 EDIKFGVDNQVDFYAVSFV--K---------DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARG 339 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV--~---------sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDgImIgrG 339 (570)
+-++.+.+.|+|++-.-+- | ..+.+..++++.++. .+.++.-+-.++.++-+.+ .+|.+-||-+
T Consensus 124 ~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e~--Gl~~~te~~d~~~~~~l~~---~vd~lkIgAr 198 (350)
T 1vr6_A 124 ETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKY--GMYVVTEALGEDDLPKVAE---YADIIQIGAR 198 (350)
T ss_dssp HHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECSSGGGHHHHHH---HCSEEEECGG
T ss_pred HHHHHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHHc--CCcEEEEeCCHHHHHHHHH---hCCEEEECcc
Confidence 3345556788887633221 1 146677788887665 4778888877777666655 4899999966
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHH-hCccEEEe
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVR-EGADAVML 405 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~-~G~D~vmL 405 (570)
++- . -.+++.+.+.||||++.|.| ..|..|+...++++. .|.+-++|
T Consensus 199 ~~~------n-----~~LL~~va~~~kPVilk~G~--------~~tl~ei~~Ave~i~~~GN~~viL 246 (350)
T 1vr6_A 199 NAQ------N-----FRLLSKAGSYNKPVLLKRGF--------MNTIEEFLLSAEYIANSGNTKIIL 246 (350)
T ss_dssp GTT------C-----HHHHHHHHTTCSCEEEECCT--------TCCHHHHHHHHHHHHHTTCCCEEE
T ss_pred ccc------C-----HHHHHHHHccCCcEEEcCCC--------CCCHHHHHHHHHHHHHCCCCeEEE
Confidence 652 2 23455555889999985432 246778877777665 45544444
No 265
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=43.17 E-value=1.1e+02 Score=31.23 Aligned_cols=96 Identities=14% Similarity=0.059 Sum_probs=56.7
Q ss_pred HHhhhhhhcCCcEEEec------CCCChhHHHHHHHHHHhcCCCceEEEeec---CcchhhhHHHHHHh-CCEEEEcCCC
Q 008319 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHELKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARGD 340 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S------fV~sa~dv~~vr~~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDgImIgrGD 340 (570)
+.+++-++.|+|+|++. +.-+.++-.++-+. ..+.+++||+-+= |.++++.....-+. +|++++-+-.
T Consensus 51 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~--~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~ 128 (344)
T 2hmc_A 51 RKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER--LVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRV 128 (344)
T ss_dssp HHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH--HHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH--HhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCc
Confidence 44467789999998763 33344444444343 3345788999874 46666666665555 9999997544
Q ss_pred cccCCCCCCHHHHHHHHHHHHH-HcCCCEEEE
Q 008319 341 LGAELPIEDVPLLQEDIIRRCR-SMQKPVIVA 371 (570)
Q Consensus 341 Lg~eig~~~v~~~qk~Ii~~c~-~~gKPviva 371 (570)
+.-. +.-..+.+..-..|. +.+.|+++.
T Consensus 129 y~~~---~s~~~l~~~f~~IA~aa~~lPiilY 157 (344)
T 2hmc_A 129 LSRG---SVIAAQKAHFKAILSAAPEIPAVIY 157 (344)
T ss_dssp SSST---TCHHHHHHHHHHHHHHSTTSCEEEE
T ss_pred cCCC---CCHHHHHHHHHHHHhhCCCCcEEEE
Confidence 3210 111223333334455 568999975
No 266
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=43.16 E-value=38 Score=35.22 Aligned_cols=98 Identities=13% Similarity=0.077 Sum_probs=52.2
Q ss_pred CCCChhhHHHh-hhhhhcCCcEEEecCCC--C---------------------hhHHHHHHHHHHhcCCCceEEE--eec
Q 008319 263 PSITDKDWEDI-KFGVDNQVDFYAVSFVK--D---------------------AKVVHELKDYLKSCNADIHVIV--KIE 316 (570)
Q Consensus 263 p~lt~kD~~dI-~~~~~~gvd~I~~SfV~--s---------------------a~dv~~vr~~l~~~~~~i~Iia--KIE 316 (570)
|.+++.|..++ +.+.+.|+|+|.++--. . +..++.+++.-+..+.++.||+ -|.
T Consensus 229 p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~ 308 (367)
T 3zwt_A 229 PDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVS 308 (367)
T ss_dssp SCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCC
Confidence 44666676555 44568999999887321 0 0012334443334445677777 455
Q ss_pred CcchhhhHHHHHHh-CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcC
Q 008319 317 SADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQ 365 (570)
Q Consensus 317 t~~gv~NldeIl~~-sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~g 365 (570)
|.+ ...+.+.. +|+|++||+=|-- +..-+..+.+.+-....+.|
T Consensus 309 s~~---da~~~l~~GAd~V~vgra~l~~--gP~~~~~i~~~l~~~m~~~G 353 (367)
T 3zwt_A 309 SGQ---DALEKIRAGASLVQLYTALTFW--GPPVVGKVKRELEALLKEQG 353 (367)
T ss_dssp SHH---HHHHHHHHTCSEEEESHHHHHH--CTHHHHHHHHHHHHHHHHTT
T ss_pred CHH---HHHHHHHcCCCEEEECHHHHhc--CcHHHHHHHHHHHHHHHHcC
Confidence 443 23333333 9999999975421 22223344444444444444
No 267
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=43.02 E-value=33 Score=35.50 Aligned_cols=64 Identities=19% Similarity=0.303 Sum_probs=39.5
Q ss_pred HHhhhhhhcCCcEEEecCCCC------hhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh----CCEEEEcC
Q 008319 271 EDIKFGVDNQVDFYAVSFVKD------AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVAR 338 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~s------a~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~----sDgImIgr 338 (570)
++++.+.+.|+|+|.++-.-. ..++..+++..+....++.||+- -||.+-+++.+. +|+++|||
T Consensus 237 e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~----GGI~~~~D~~k~l~~GAdaV~iGr 310 (370)
T 1gox_A 237 EDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLD----GGVRRGTDVFKALALGAAGVFIGR 310 (370)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEE----SSCCSHHHHHHHHHHTCSEEEECH
T ss_pred HHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEE----CCCCCHHHHHHHHHcCCCEEeecH
Confidence 566778899999999964211 12334444444434446777772 355554554444 89999998
No 268
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=43.01 E-value=1.4e+02 Score=29.76 Aligned_cols=119 Identities=11% Similarity=0.128 Sum_probs=71.0
Q ss_pred HHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHHhhcCCC
Q 008319 355 EDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLP 434 (570)
Q Consensus 355 k~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~~~ 434 (570)
.-+...|+..|.++.+.- |.......+...-..|++.+...+. | -++.+...+++.+-.. .+
T Consensus 87 ~alA~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~-----~-~~~~~~a~~l~~~~~~-~~ 148 (323)
T 1v71_A 87 QAIALSAKILGIPAKIIM-----------PLDAPEAKVAATKGYGGQVIMYDRY-----K-DDREKMAKEISEREGL-TI 148 (323)
T ss_dssp HHHHHHHHHTTCCEEEEE-----------ETTCCHHHHHHHHHTTCEEEEECTT-----T-TCHHHHHHHHHHHHTC-BC
T ss_pred HHHHHHHHHcCCCEEEEC-----------CCCCcHHHHHHHHHcCCEEEEECCC-----H-HHHHHHHHHHHHhcCC-Ee
Confidence 346677999999988741 1111122455667789998876543 2 2456666666544322 21
Q ss_pred CCCCCCCcccCCCCChhHHHHHHHHHHHhhcC-C-cEEEEcCChHHHHHHHh----cCCCCeEEEEeCCH
Q 008319 435 VSITPPTQFSAHKSHMGDMFAFHSTTMANTLN-T-PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQE 498 (570)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~-a-~Iiv~T~sG~tA~~ls~----~RP~~pIiavt~~~ 498 (570)
..+ |.+. .........+.++.++++ . .||+.+-+|.|+--+++ +.|...|+++.+..
T Consensus 149 i~~-~~n~------~~~~g~~t~~~Ei~~q~~~~d~vv~~vG~GGt~~Gi~~~~k~~~~~~~vigve~~~ 211 (323)
T 1v71_A 149 IPP-YDHP------HVLAGQGTAAKELFEEVGPLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVEPEA 211 (323)
T ss_dssp CCS-SSSH------HHHHHHTHHHHHHHHHHCCCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGG
T ss_pred cCC-CCCc------chhhhHhHHHHHHHHhcCCCCEEEEecCCcHHHHHHHHHHHHcCCCCEEEEEEeCC
Confidence 111 1110 111122233556666665 4 78999999999877765 46999999999864
No 269
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=42.91 E-value=1.1e+02 Score=30.34 Aligned_cols=147 Identities=12% Similarity=0.158 Sum_probs=85.3
Q ss_pred CCCChhhHHHhhhhhhcCCcEEEecCCC-------------ChhHHHHHHHHHHhcCCCceEEEeecC------cchhhh
Q 008319 263 PSITDKDWEDIKFGVDNQVDFYAVSFVK-------------DAKVVHELKDYLKSCNADIHVIVKIES------ADSIPN 323 (570)
Q Consensus 263 p~lt~kD~~dI~~~~~~gvd~I~~SfV~-------------sa~dv~~vr~~l~~~~~~i~IiaKIEt------~~gv~N 323 (570)
..+|-+|.---+.+-+.|+|.|.+..-- +-+++..--+.+.+.-....|++=.+- .++++|
T Consensus 20 ~~~tayD~~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pfgsy~~~~~a~~~ 99 (264)
T 1m3u_A 20 ATITAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFEN 99 (264)
T ss_dssp EEEECCSHHHHHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCTTSSSSHHHHHHH
T ss_pred EEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCCCCcCCHHHHHHH
Confidence 3456677766666778899999876210 112332212223333455677777664 346677
Q ss_pred HHHHHHh-CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEE----EEccchhhh---hcCCC-cChHH--HhHH
Q 008319 324 LHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVI----VATNMLESM---IDHPT-PTRAE--VSDI 392 (570)
Q Consensus 324 ldeIl~~-sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvi----vaTqmLeSM---~~~~~-PtrAE--v~Dv 392 (570)
...+++. +++|-+-=|+ .+...|+++.++|.||+ +.-|-...+ ....+ ..+++ +.|.
T Consensus 100 a~rl~kaGa~aVklEgg~------------e~~~~I~al~~agipV~gHiGLtPq~v~~~ggf~v~grt~~~a~~~i~rA 167 (264)
T 1m3u_A 100 AATVMRAGANMVKIEGGE------------WLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDA 167 (264)
T ss_dssp HHHHHHTTCSEEECCCSG------------GGHHHHHHHHHTTCCEEEEEESCGGGHHHHTSSCCCCCSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECCcH------------HHHHHHHHHHHCCCCeEeeecCCceeecccCCeEEEeCCHHHHHHHHHHH
Confidence 7788876 8899885441 34456677788999986 222222111 11111 12233 6677
Q ss_pred HHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHHhh
Q 008319 393 AIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (570)
Q Consensus 393 ~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE 430 (570)
-.+...|+|+++|=+ -|. +....|+++..
T Consensus 168 ~a~~eAGA~~ivlE~------vp~---~~a~~it~~l~ 196 (264)
T 1m3u_A 168 LALEAAGAQLLVLEC------VPV---ELAKRITEALA 196 (264)
T ss_dssp HHHHHHTCCEEEEES------CCH---HHHHHHHHHCS
T ss_pred HHHHHCCCcEEEEec------CCH---HHHHHHHHhCC
Confidence 778889999999942 142 33556666655
No 270
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3
Probab=42.57 E-value=26 Score=35.81 Aligned_cols=61 Identities=20% Similarity=0.289 Sum_probs=37.5
Q ss_pred CCCCCCHHHHHHHHHhCCcEEEEecCCCChH------HHHHHHHHHHHHHhhcCCCcEEEEeecCCC
Q 008319 108 GPSTSSREMIWKLAEEGMNVARLNMSHGDHA------SHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (570)
Q Consensus 108 GPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e------~~~~~i~~ir~~~~~~~~~~i~I~~Dl~Gp 168 (570)
|+.....+.++.|.+.|+|++||-++..... .-.+.++.++++.+....+-+.+++|+-..
T Consensus 58 ~~~~~~~~di~~i~~~G~n~vRipv~w~~~~~~~~~~~~~~~l~~l~~~v~~a~~~Gi~vild~H~~ 124 (380)
T 1edg_A 58 SGIKTTKQMIDAIKQKGFNTVRIPVSWHPHVSGSDYKISDVWMNRVQEVVNYCIDNKMYVILNTHHD 124 (380)
T ss_dssp TCSCCCHHHHHHHHHHTCCEEEECCCCGGGEETTTTEECHHHHHHHHHHHHHHHTTTCEEEEECCSC
T ss_pred CCCcccHHHHHHHHHcCCCEEEecccHHhhcCCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEeCCCc
Confidence 3444678899999999999999988654211 001223333333322222457889998754
No 271
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=42.40 E-value=2.3e+02 Score=27.82 Aligned_cols=95 Identities=13% Similarity=0.069 Sum_probs=55.4
Q ss_pred HHhhhhhhcCCcEEEec------CCCChhHH-HHHHHHHHhcCCCceEEEee---cCcchhhhHHHHHHh-CCEEEEcCC
Q 008319 271 EDIKFGVDNQVDFYAVS------FVKDAKVV-HELKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 339 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S------fV~sa~dv-~~vr~~l~~~~~~i~IiaKI---Et~~gv~NldeIl~~-sDgImIgrG 339 (570)
+.++|-++.|+|++.+. +.=|.++- +-++...+..+. ||+-+ -|.++++.....-+. +|++++-+-
T Consensus 23 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g---vi~Gvg~~~t~~ai~la~~A~~~Gadavlv~~P 99 (286)
T 2r91_A 23 NHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR---VIVQVASLNADEAIALAKYAESRGAEAVASLPP 99 (286)
T ss_dssp HHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS---EEEECCCSSHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---EEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 45577789999998763 22233333 333444444443 87877 346666666665555 899999765
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
.+.-. +.-..+.+..-..|.+.+.|+++.
T Consensus 100 ~y~~~---~s~~~l~~~f~~va~a~~lPiilY 128 (286)
T 2r91_A 100 YYFPR---LSERQIAKYFRDLCSAVSIPVFLY 128 (286)
T ss_dssp CSSTT---CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred cCCCC---CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 44210 122233334444556678999975
No 272
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=42.31 E-value=77 Score=31.94 Aligned_cols=106 Identities=15% Similarity=0.209 Sum_probs=69.3
Q ss_pred CCCceEEEeecCcchhhhHHHHHHh-CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccch---hhhhcC
Q 008319 306 NADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNML---ESMIDH 381 (570)
Q Consensus 306 ~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmL---eSM~~~ 381 (570)
+..++|.........++.+.+-++. ..-+|+. .| ++|+++=...-+++++.|++.|..|=.==-.+ |.-...
T Consensus 78 ~~~VPValHlDHg~~~e~i~~ai~~GFtSVMiD---gS-~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~Ed~~~~ 153 (288)
T 3q94_A 78 NITVPVAIHLDHGSSFEKCKEAIDAGFTSVMID---AS-HHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIA 153 (288)
T ss_dssp TCCSCEEEEEEEECSHHHHHHHHHHTCSEEEEC---CT-TSCHHHHHHHHHHHHHHHHTTTCEEEEEESBCBCSCSSCGG
T ss_pred CCCCcEEEECCCCCCHHHHHHHHHcCCCeEEEe---CC-CCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcCC
Confidence 5679999999988766655555554 6799994 44 46777767778899999999998773100000 000000
Q ss_pred CCcChHHHhHHHHHH-HhCccEEEecccccCCCCH
Q 008319 382 PTPTRAEVSDIAIAV-REGADAVMLSGETAHGKFP 415 (570)
Q Consensus 382 ~~PtrAEv~Dv~nav-~~G~D~vmLs~ETA~G~yP 415 (570)
..-...+..+...++ .-|+|++-.+--|+.|.||
T Consensus 154 ~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~ 188 (288)
T 3q94_A 154 EGVIYADPAECKHLVEATGIDCLAPALGSVHGPYK 188 (288)
T ss_dssp GGCBCCCHHHHHHHHHHHCCSEEEECSSCBSSCCS
T ss_pred ccccCCCHHHHHHHHHHHCCCEEEEEcCcccCCcC
Confidence 000011133455666 5899999999999999998
No 273
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=42.23 E-value=2e+02 Score=27.26 Aligned_cols=42 Identities=12% Similarity=0.139 Sum_probs=31.0
Q ss_pred HHhhhhhhcCCcEEEecCCC----ChhHHHHHHHHHHhcCCCceEE
Q 008319 271 EDIKFGVDNQVDFYAVSFVK----DAKVVHELKDYLKSCNADIHVI 312 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~----sa~dv~~vr~~l~~~~~~i~Ii 312 (570)
+.++.+.+.|+|+|-+..-. +.+++.++++.+++.|-.+..+
T Consensus 25 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~ 70 (290)
T 3tva_A 25 VHLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVI 70 (290)
T ss_dssp BCHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence 35677778999999877542 3667888999998877665444
No 274
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=42.17 E-value=40 Score=35.33 Aligned_cols=66 Identities=14% Similarity=0.205 Sum_probs=43.0
Q ss_pred HHHhhhhhhcCCcEEEecCCC------ChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh----CCEEEEcCC
Q 008319 270 WEDIKFGVDNQVDFYAVSFVK------DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVARG 339 (570)
Q Consensus 270 ~~dI~~~~~~gvd~I~~SfV~------sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~----sDgImIgrG 339 (570)
.++.+.+.+.|+|+|.+|--- ....+..+.+..+..+.++.||+ --||.+-.+++++ +|+++|||.
T Consensus 263 ~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia----~GGI~~g~Dv~kalalGAd~V~iGr~ 338 (392)
T 2nzl_A 263 GDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFL----DGGVRKGTDVLKALALGAKAVFVGRP 338 (392)
T ss_dssp HHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEE----CSSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred HHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEE----ECCCCCHHHHHHHHHhCCCeeEECHH
Confidence 455677789999999996321 11233444444333345688887 2467777777766 899999983
No 275
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=41.52 E-value=25 Score=38.69 Aligned_cols=51 Identities=24% Similarity=0.381 Sum_probs=42.1
Q ss_pred CCceEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHH
Q 008319 99 RKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKE 149 (570)
Q Consensus 99 r~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~ 149 (570)
.+-.+=+.+|-.-++.|-.+.|+++|+|++=|+.+||..+...++++.+|+
T Consensus 268 grL~VgAAVgv~~d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~ 318 (556)
T 4af0_A 268 KQLYCGAAIGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQ 318 (556)
T ss_dssp CCBCCEEEECSSHHHHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHH
T ss_pred hceeeEEEeccCccHHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHh
Confidence 345566777766677888999999999999999999999888777777775
No 276
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=41.50 E-value=2.3e+02 Score=26.55 Aligned_cols=88 Identities=10% Similarity=0.013 Sum_probs=56.9
Q ss_pred HHhhhhhhcCCcEEEecCC---------------CChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-----
Q 008319 271 EDIKFGVDNQVDFYAVSFV---------------KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----- 330 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV---------------~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~----- 330 (570)
+.++.+.+.|+|+|-+... .+.+++.++++.+++.|-.+..+.-- .....+.++..++.
T Consensus 26 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~-~~~~~~~~~~~i~~A~~lG 104 (262)
T 3p6l_A 26 EALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVY-VAEKSSDWEKMFKFAKAMD 104 (262)
T ss_dssp HHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEE-CCSSTTHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEecc-CCccHHHHHHHHHHHHHcC
Confidence 5567788999999987642 35778899999999888765443321 11234444444443
Q ss_pred CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEE
Q 008319 331 SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 370 (570)
Q Consensus 331 sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPviv 370 (570)
++.|.+.+|. + .-+++.+.|.++|..+.+
T Consensus 105 a~~v~~~~~~-------~----~~~~l~~~a~~~gv~l~~ 133 (262)
T 3p6l_A 105 LEFITCEPAL-------S----DWDLVEKLSKQYNIKISV 133 (262)
T ss_dssp CSEEEECCCG-------G----GHHHHHHHHHHHTCEEEE
T ss_pred CCEEEecCCH-------H----HHHHHHHHHHHhCCEEEE
Confidence 5677777652 2 226778888888876654
No 277
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=41.35 E-value=1.9e+02 Score=28.52 Aligned_cols=118 Identities=13% Similarity=0.093 Sum_probs=68.7
Q ss_pred HHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHHhhcCCCC
Q 008319 356 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPV 435 (570)
Q Consensus 356 ~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~~~~ 435 (570)
-+...|++.|.++.+.. |.......+...-..|++.+...+ .| -++.+...++..+ +...+.
T Consensus 68 alA~~a~~~G~~~~i~~-----------p~~~~~~k~~~~~~~Ga~V~~~~~-----~~-~~~~~~a~~~~~~-~~~~~~ 129 (318)
T 2rkb_A 68 AAAYAARKLGIPATIVL-----------PESTSLQVVQRLQGEGAEVQLTGK-----VW-DEANLRAQELAKR-DGWENV 129 (318)
T ss_dssp HHHHHHHHHTCCEEEEE-----------CTTCCHHHHHHHHHTTCEEEECCS-----SH-HHHHHHHHHHHHS-TTEEEC
T ss_pred HHHHHHHHcCCCEEEEE-----------CCCCcHHHHHHHHhcCCEEEEECC-----CH-HHHHHHHHHHHHh-cCCEEe
Confidence 46677899999998741 111112334556677998877532 33 5666666665543 111111
Q ss_pred CCCCCCcccCCCCChhHHHHHHHHHHHhhcC--C-cEEEEcCChHHHHHHHhc-----CCCCeEEEEeCCH
Q 008319 436 SITPPTQFSAHKSHMGDMFAFHSTTMANTLN--T-PIIVFTRTGSMAVILSHY-----RPSSTIFAFTNQE 498 (570)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~--a-~Iiv~T~sG~tA~~ls~~-----RP~~pIiavt~~~ 498 (570)
.++ .+. .....-...+.++.++++ . .||+.+-+|.++.-++++ .|...|+++.+..
T Consensus 130 ~~~-~n~------~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~ 193 (318)
T 2rkb_A 130 PPF-DHP------LIWKGHASLVQELKAVLRTPPGALVLAVGGGGLLAGVVAGLLEVGWQHVPIIAMETHG 193 (318)
T ss_dssp CSS-CSH------HHHHHHHHHHHHHHHHSSSCCSEEEEECSSSHHHHHHHHHHHHHTCTTSCEEEEEETT
T ss_pred CCC-CCh------hhccchhHHHHHHHHhcCCCCCEEEEeeCCCcHHHHHHHHHHHhCCCCCEEEEEecCC
Confidence 111 110 111222233456667765 4 799999999998777753 2889999999864
No 278
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=41.29 E-value=1.4e+02 Score=29.79 Aligned_cols=158 Identities=16% Similarity=0.145 Sum_probs=79.4
Q ss_pred HHHHHh-CCEEEEcC--CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHH-HhHHHHHHHhCc
Q 008319 325 HSIISA-SDGAMVAR--GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (570)
Q Consensus 325 deIl~~-sDgImIgr--GDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~ 400 (570)
+-.++. +||+++.= |+. ..+..++-..+.+..++.++ -..|||.- ....+-+| +.-.-.|-..|+
T Consensus 35 ~~li~~Gv~gl~~~GttGE~-~~Ls~~Er~~v~~~~~~~~~-grvpviaG---------vg~~~t~~ai~la~~a~~~Ga 103 (297)
T 3flu_A 35 DWHIENGTDGIVAVGTTGES-ATLSVEEHTAVIEAVVKHVA-KRVPVIAG---------TGANNTVEAIALSQAAEKAGA 103 (297)
T ss_dssp HHHHHTTCCEEEESSTTTTG-GGSCHHHHHHHHHHHHHHHT-TSSCEEEE---------CCCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEeCccccCc-ccCCHHHHHHHHHHHHHHhC-CCCcEEEe---------CCCcCHHHHHHHHHHHHHcCC
Confidence 333444 89999841 111 12222333333333333332 24688863 33344445 555667778899
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCcccCCCCCh-hHHHHHHHHHHHhhcCCcEEE--EcC--C
Q 008319 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFSAHKSHM-GDMFAFHSTTMANTLNTPIIV--FTR--T 475 (570)
Q Consensus 401 D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~-~~~ia~~av~~a~~~~a~Iiv--~T~--s 475 (570)
|++|+..=--...-+-+.++....|+..+.--+. +|+...+ ...++ .+.+ .+++ +.. .|+- .|. -
T Consensus 104 davlv~~P~y~~~~~~~l~~~f~~va~a~~lPii---lYn~P~~-tg~~l~~~~~----~~La-~~p-nivgiKdssgd~ 173 (297)
T 3flu_A 104 DYTLSVVPYYNKPSQEGIYQHFKTIAEATSIPMI---IYNVPGR-TVVSMTNDTI----LRLA-EIP-NIVGVKEASGNI 173 (297)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEE---EEECHHH-HSSCCCHHHH----HHHT-TST-TEEEEEECSCCH
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEE---EEECCch-hccCCCHHHH----HHHH-cCC-CEEEEEeCCCCH
Confidence 9999864332233356788999999888753211 1111000 00111 2333 3455 333 3332 332 1
Q ss_pred hHHHHHHHhcCCCCeEEEEeCCHHHHHHh
Q 008319 476 GSMAVILSHYRPSSTIFAFTNQERIKQRL 504 (570)
Q Consensus 476 G~tA~~ls~~RP~~pIiavt~~~~taRrL 504 (570)
.+..+.+...+|...|+.-.. ..+...|
T Consensus 174 ~~~~~~~~~~~~~f~v~~G~d-~~~l~~l 201 (297)
T 3flu_A 174 GSNIELINRAPEGFVVLSGDD-HTALPFM 201 (297)
T ss_dssp HHHHHHHHHSCTTCEEEECCG-GGHHHHH
T ss_pred HHHHHHHHhcCCCeEEEECcH-HHHHHHH
Confidence 355666777778888876543 3343433
No 279
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=41.29 E-value=83 Score=29.95 Aligned_cols=39 Identities=13% Similarity=0.016 Sum_probs=28.7
Q ss_pred HHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCce
Q 008319 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIH 310 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~ 310 (570)
+.++.+.+.|+|+|-+.+- ...++.++++.+++.|-.+.
T Consensus 27 ~~l~~~~~~G~~~vEl~~~-~~~~~~~~~~~l~~~gl~~~ 65 (269)
T 3ngf_A 27 ERFRLAAEAGFGGVEFLFP-YDFDADVIARELKQHNLTQV 65 (269)
T ss_dssp HHHHHHHHTTCSEEECSCC-TTSCHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHcCCCEEEecCC-ccCCHHHHHHHHHHcCCcEE
Confidence 4567788999999988653 34567888888888765543
No 280
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=41.29 E-value=1e+02 Score=33.49 Aligned_cols=94 Identities=17% Similarity=0.181 Sum_probs=54.1
Q ss_pred hhHHHHHHHHHHhcCCCceEEEe-ecCcchhhhHHHHHHh-CCEEEEcCCCcccCC--CCCCHHHHHHHHHHHHHH----
Q 008319 292 AKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVARGDLGAEL--PIEDVPLLQEDIIRRCRS---- 363 (570)
Q Consensus 292 a~dv~~vr~~l~~~~~~i~IiaK-IEt~~gv~NldeIl~~-sDgImIgrGDLg~ei--g~~~v~~~qk~Ii~~c~~---- 363 (570)
.+++..+++.. +++|+.| +-+ .+......+. +|+|.|+- --|..+ +.. -..+..++.+.+++
T Consensus 332 ~~~i~~lr~~~-----~~PvivKgv~~---~e~A~~a~~aGad~I~vs~-hgG~~~d~~~~-~~~~l~~v~~~v~~~~~~ 401 (511)
T 1kbi_A 332 WKDIEELKKKT-----KLPIVIKGVQR---TEDVIKAAEIGVSGVVLSN-HGGRQLDFSRA-PIEVLAETMPILEQRNLK 401 (511)
T ss_dssp HHHHHHHHHHC-----SSCEEEEEECS---HHHHHHHHHTTCSEEEECC-TTTTSSTTCCC-HHHHHHHHHHHHHTTTCB
T ss_pred HHHHHHHHHHh-----CCcEEEEeCCC---HHHHHHHHHcCCCEEEEcC-CCCccCCCCCc-hHHHHHHHHHHHHhhccC
Confidence 45566666543 5778888 322 3333333333 89999941 112222 222 23444556665543
Q ss_pred cCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecc
Q 008319 364 MQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (570)
Q Consensus 364 ~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (570)
...|||.. ...-+ -.|+..++..|+|+||+..
T Consensus 402 ~~ipVia~---------GGI~~---g~Dv~kaLalGAdaV~iGr 433 (511)
T 1kbi_A 402 DKLEVFVD---------GGVRR---GTDVLKALCLGAKGVGLGR 433 (511)
T ss_dssp TTBEEEEE---------SSCCS---HHHHHHHHHHTCSEEEECH
T ss_pred CCcEEEEE---------CCCCC---HHHHHHHHHcCCCEEEECH
Confidence 26788864 22222 4588999999999999864
No 281
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=41.17 E-value=2.3e+02 Score=26.48 Aligned_cols=39 Identities=5% Similarity=0.009 Sum_probs=28.3
Q ss_pred HHhhhhhhcCCcEEEecCCC------ChhHHHHHHHHHHhcCCCc
Q 008319 271 EDIKFGVDNQVDFYAVSFVK------DAKVVHELKDYLKSCNADI 309 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~------sa~dv~~vr~~l~~~~~~i 309 (570)
+.++.+.+.|+|+|-+..-. +..++.++++.+++.|-.+
T Consensus 23 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~ 67 (272)
T 2q02_A 23 AFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEI 67 (272)
T ss_dssp HHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeE
Confidence 55677889999999876321 3467788888888876654
No 282
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=40.95 E-value=57 Score=31.96 Aligned_cols=66 Identities=5% Similarity=0.105 Sum_probs=41.4
Q ss_pred hHHHhhhhhhcCCcEEEecCC------CChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh---CCEEEEcC
Q 008319 269 DWEDIKFGVDNQVDFYAVSFV------KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA---SDGAMVAR 338 (570)
Q Consensus 269 D~~dI~~~~~~gvd~I~~SfV------~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~---sDgImIgr 338 (570)
+++.+..+.+.|+|+|++... -+.+...++...+...+.++.++| | -|+.+.+++.+. +||++||.
T Consensus 163 ~~~E~~~a~~~gad~IGvn~~~l~~~~~dl~~~~~L~~~i~~~~~~~~vIA--e--gGI~s~~dv~~l~~Ga~gvlVGs 237 (254)
T 1vc4_A 163 TERELEIALEAGAEVLGINNRDLATLHINLETAPRLGRLARKRGFGGVLVA--E--SGYSRKEELKALEGLFDAVLIGT 237 (254)
T ss_dssp SHHHHHHHHHHTCSEEEEESBCTTTCCBCTTHHHHHHHHHHHTTCCSEEEE--E--SCCCSHHHHHTTTTTCSEEEECH
T ss_pred CHHHHHHHHHcCCCEEEEccccCcCCCCCHHHHHHHHHhCccccCCCeEEE--E--cCCCCHHHHHHHHcCCCEEEEeH
Confidence 444566788889999988532 233334444444433222567777 3 377777776666 79999985
No 283
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=40.91 E-value=36 Score=36.32 Aligned_cols=49 Identities=22% Similarity=0.411 Sum_probs=39.4
Q ss_pred eEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHH
Q 008319 102 KIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEY 150 (570)
Q Consensus 102 KIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~ 150 (570)
.+.+-+|+.....+.++.++++|++++=++++||......+.++.+|+.
T Consensus 227 ~vga~ig~~~~~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~ 275 (494)
T 1vrd_A 227 LVGAAVGTSPETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKAD 275 (494)
T ss_dssp CCEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH
T ss_pred ccccccCcCHhHHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHH
Confidence 3444567766668899999999999999999999887777777777753
No 284
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=40.50 E-value=45 Score=34.59 Aligned_cols=67 Identities=16% Similarity=0.240 Sum_probs=42.6
Q ss_pred HHhhhhhhcCCcEEEecCCC------ChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh----CCEEEEcCCC
Q 008319 271 EDIKFGVDNQVDFYAVSFVK------DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVARGD 340 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~------sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~----sDgImIgrGD 340 (570)
++.+.+.+.|+|+|.++--. ....+..+.+..+..+.++.||+- -||.+-.++++. +|+++|||.=
T Consensus 229 e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~----GGI~~g~Dv~kaLalGA~aV~iGr~~ 304 (352)
T 3sgz_A 229 EDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMD----GGVRTGTDVLKALALGARCIFLGRPI 304 (352)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEE----SSCCSHHHHHHHHHTTCSEEEESHHH
T ss_pred HHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEE----CCCCCHHHHHHHHHcCCCEEEECHHH
Confidence 55667788999999986421 122334444444444557888872 356666666665 8999999853
Q ss_pred c
Q 008319 341 L 341 (570)
Q Consensus 341 L 341 (570)
|
T Consensus 305 l 305 (352)
T 3sgz_A 305 L 305 (352)
T ss_dssp H
T ss_pred H
Confidence 3
No 285
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=40.50 E-value=62 Score=32.63 Aligned_cols=79 Identities=14% Similarity=0.130 Sum_probs=49.7
Q ss_pred HhhhhhhcCCcEEEecCC----CChhHHHHHHHHHHh-cCCC-ceEEEeecCcchhhhHHHHHHh-CCEEEEcCCCcccC
Q 008319 272 DIKFGVDNQVDFYAVSFV----KDAKVVHELKDYLKS-CNAD-IHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAE 344 (570)
Q Consensus 272 dI~~~~~~gvd~I~~SfV----~sa~dv~~vr~~l~~-~~~~-i~IiaKIEt~~gv~NldeIl~~-sDgImIgrGDLg~e 344 (570)
..+.+.+.|+|+|-+.+. .+.+++.++.+.... .+.. +.+..-+-..+-++++.+.++. ++|+.+||.=+...
T Consensus 182 aa~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~~ 261 (304)
T 1to3_A 182 AAKELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHINMPWVILSSGVDEKLFPRAVRVAMEAGASGFLAGRAVWSSV 261 (304)
T ss_dssp HHHHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTCCSCEEECCTTSCTTTHHHHHHHHHHTTCCEEEESHHHHGGG
T ss_pred HHHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccCCCCeEEEecCCCHHHHHHHHHHHHHcCCeEEEEehHHhCcc
Confidence 356677899999998874 344555444444333 3333 3334445333456788888877 99999999877664
Q ss_pred CCCCCH
Q 008319 345 LPIEDV 350 (570)
Q Consensus 345 ig~~~v 350 (570)
++.++.
T Consensus 262 ~~~~dp 267 (304)
T 1to3_A 262 IGLPDT 267 (304)
T ss_dssp TTCSCH
T ss_pred ccCCCH
Confidence 544443
No 286
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=40.39 E-value=1.1e+02 Score=31.27 Aligned_cols=119 Identities=13% Similarity=0.094 Sum_probs=69.3
Q ss_pred HHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHHhhcCCC
Q 008319 355 EDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLP 434 (570)
Q Consensus 355 k~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~~~ 434 (570)
.-+...|++.|.++.+. .|..+....+...-..|++.+...+ .| -++.+...+++.+-...++
T Consensus 106 ~alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~Vv~v~~-----~~-~~a~~~a~~l~~~~~~~~~ 168 (364)
T 4h27_A 106 MAAAYAARQLGVPATIV-----------VPGTTPALTIERLKNEGATVKVVGE-----LL-DEAFELAKALAKNNPGWVY 168 (364)
T ss_dssp HHHHHHHHHHTCCEEEE-----------EETTSCHHHHHHHHTTTCEEEEECS-----ST-THHHHHHHHHHHHSTTEEE
T ss_pred HHHHHHHHHhCCceEEE-----------ECCCCCHHHHHHHHHcCCEEEEECC-----CH-HHHHHHHHHHHHhCCCeEE
Confidence 34667799999998874 1222222345555668999877642 33 3677777776554312222
Q ss_pred CCCCCCCcccCCCCChhHHHHHHHHHHHhhcC--C-cEEEEcCChHHHHHHHh----cC-CCCeEEEEeCC
Q 008319 435 VSITPPTQFSAHKSHMGDMFAFHSTTMANTLN--T-PIIVFTRTGSMAVILSH----YR-PSSTIFAFTNQ 497 (570)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~--a-~Iiv~T~sG~tA~~ls~----~R-P~~pIiavt~~ 497 (570)
..++ .+. .....-...+.++.++++ . .||+.+-+|.++--+++ +. |.++||++-++
T Consensus 169 ~~~~-~np------~~~~G~~t~~~Ei~~q~~~~~D~vvvpvG~GG~~aGi~~~~k~~~~p~~~vigVe~~ 232 (364)
T 4h27_A 169 IPPF-DDP------LIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQEVGWGDVPVIAMETF 232 (364)
T ss_dssp ECSS-CSH------HHHHHHTHHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEET
T ss_pred eCCC-CCH------HHHHHHHHHHHHHHHHhCCCCCEEEEcCCccHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 1111 110 011111223456777775 3 78999999988766654 33 88999999764
No 287
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=40.24 E-value=74 Score=32.69 Aligned_cols=116 Identities=17% Similarity=0.286 Sum_probs=75.9
Q ss_pred CCceEEEeecCcchhhhHHHHHHh-CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCE----EEEccchh-hhhc
Q 008319 307 ADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPV----IVATNMLE-SMID 380 (570)
Q Consensus 307 ~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPv----ivaTqmLe-SM~~ 380 (570)
..++|..........+.+.+-++. ..-+|+. .| ++|+++=...-+++++.|++.|..| +.-.. .| ....
T Consensus 74 ~~VPValHlDHg~~~e~i~~ai~~GFtSVMiD---gS-~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg-~Ed~v~~ 148 (323)
T 2isw_A 74 PDIPICIHLDHGDTLESVKMAIDLGFSSVMID---AS-HHPFDENVRITKEVVAYAHARSVSVEAELGTLGG-IEEDVQN 148 (323)
T ss_dssp TTSCEEEEEEEECSHHHHHHHHHTTCSEEEEC---CT-TSCHHHHHHHHHHHHHHHHTTTCEEEEEESCC----------
T ss_pred CCCcEEEECCCCCCHHHHHHHHHcCCCeEEec---CC-CCCHHHHHHHHHHHHHHHHHcCCeEEEEeCCccC-CccCccc
Confidence 578899999988777776666665 7899994 44 5688777778899999999999887 21111 11 0000
Q ss_pred CCCcChHHHhHHHHHH-HhCccEEEecccccCCCCH--HHH-----HHHHHHHHHHh
Q 008319 381 HPTPTRAEVSDIAIAV-REGADAVMLSGETAHGKFP--LKA-----VKVMHTVALRT 429 (570)
Q Consensus 381 ~~~PtrAEv~Dv~nav-~~G~D~vmLs~ETA~G~yP--~ea-----V~~m~~I~~~a 429 (570)
...-| +..+...++ .-|+|++-.+--|+.|.|+ -+. ...|.+|-..+
T Consensus 149 ~~~yT--dPeea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~ 203 (323)
T 2isw_A 149 TVQLT--EPQDAKKFVELTGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLT 203 (323)
T ss_dssp -CCCC--CHHHHHHHHHHHCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHH
T ss_pred ccccC--CHHHHHHHHHHHCCCEEEEecCccccccCCCCCcccccCHHHHHHHHHHh
Confidence 00111 123445555 4799999999999999997 332 24666665555
No 288
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=39.95 E-value=43 Score=34.69 Aligned_cols=65 Identities=14% Similarity=0.124 Sum_probs=41.1
Q ss_pred HHHhhhhhhcCCcEEEecCCC------ChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh----CCEEEEcC
Q 008319 270 WEDIKFGVDNQVDFYAVSFVK------DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVAR 338 (570)
Q Consensus 270 ~~dI~~~~~~gvd~I~~SfV~------sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~----sDgImIgr 338 (570)
.++.+.+.+.|+|+|.+|--- ....+..+.+..+..+.++.||+- -||.+-.++++. +|+++|||
T Consensus 240 ~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~----GGI~~g~D~~kalalGAd~V~iGr 314 (368)
T 2nli_A 240 PEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFD----SGVRRGEHVAKALASGADVVALGR 314 (368)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEEC----SSCCSHHHHHHHHHTTCSEEEECH
T ss_pred HHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEE----CCCCCHHHHHHHHHcCCCEEEECH
Confidence 355677789999999996410 112333333333333446778872 466666666665 89999998
No 289
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=39.89 E-value=1.6e+02 Score=28.92 Aligned_cols=116 Identities=16% Similarity=0.222 Sum_probs=70.2
Q ss_pred HhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHhCCEE--EEcCCCcccCCCCC-
Q 008319 272 DIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGA--MVARGDLGAELPIE- 348 (570)
Q Consensus 272 dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDgI--mIgrGDLg~eig~~- 348 (570)
-++.+.+.|+|++.++=. -.++..++++.+++.|-+...++-=. ...+.+.+|.+.++|. ++.+ .| -.|..
T Consensus 108 F~~~~~~aGvdG~IipDL-P~eE~~~~~~~~~~~Gl~~I~lvaP~--t~~eRi~~ia~~a~gFiY~Vs~--~G-vTG~~~ 181 (252)
T 3tha_A 108 FVKKAKSLGICALIVPEL-SFEESDDLIKECERYNIALITLVSVT--TPKERVKKLVKHAKGFIYLLAS--IG-ITGTKS 181 (252)
T ss_dssp HHHHHHHTTEEEEECTTC-CGGGCHHHHHHHHHTTCEECEEEETT--SCHHHHHHHHTTCCSCEEEECC--SC-SSSCSH
T ss_pred HHHHHHHcCCCEEEeCCC-CHHHHHHHHHHHHHcCCeEEEEeCCC--CcHHHHHHHHHhCCCeEEEEec--CC-CCCccc
Confidence 345566889999998866 34556778888877776532222112 2368899999998755 3321 11 12332
Q ss_pred CHHHHHHHHHHHHHHc-CCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 349 DVPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 349 ~v~~~qk~Ii~~c~~~-gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
.+..-.+..++..+++ ++|+++. ...-+...+. .+..++|+++.-
T Consensus 182 ~~~~~~~~~v~~vr~~~~~Pv~vG---------fGIst~e~a~----~~~~~ADGVIVG 227 (252)
T 3tha_A 182 VEEAILQDKVKEIRSFTNLPIFVG---------FGIQNNQDVK----RMRKVADGVIVG 227 (252)
T ss_dssp HHHHHHHHHHHHHHTTCCSCEEEE---------SSCCSHHHHH----HHTTTSSEEEEC
T ss_pred CCCHHHHHHHHHHHHhcCCcEEEE---------cCcCCHHHHH----HHHhcCCEEEEC
Confidence 3344456777777776 6799874 3333333332 344579999874
No 290
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=39.84 E-value=57 Score=33.15 Aligned_cols=82 Identities=10% Similarity=-0.029 Sum_probs=51.0
Q ss_pred hcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh--CCEEEEcCCCcccCCCCCCHHHHHH
Q 008319 278 DNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQE 355 (570)
Q Consensus 278 ~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~--sDgImIgrGDLg~eig~~~v~~~qk 355 (570)
+.|+++|--|+- ++|+..++++-+. ..++|+ -=|+....+.+.++++. +|+|++.++-+|- ..--.
T Consensus 214 ~~~i~~iE~P~~--~~~~~~~~~l~~~--~~iPI~-~de~~~~~~~~~~~i~~~~~d~v~ik~~~~GG-------i~~~~ 281 (359)
T 1mdl_A 214 QEGVTWIEEPTL--QHDYEGHQRIQSK--LNVPVQ-MGENWLGPEEMFKALSIGACRLAMPDAMKIGG-------VTGWI 281 (359)
T ss_dssp HHTCSCEECCSC--TTCHHHHHHHHHT--CSSCEE-ECTTCCSHHHHHHHHHTTCCSEECCBTTTTTH-------HHHHH
T ss_pred HhCCCeEECCCC--hhhHHHHHHHHHh--CCCCEE-eCCCCCCHHHHHHHHHcCCCCEEeecchhhCC-------HHHHH
Confidence 345555544442 2344444433222 245554 45777777788888776 8999997655542 22335
Q ss_pred HHHHHHHHcCCCEEEE
Q 008319 356 DIIRRCRSMQKPVIVA 371 (570)
Q Consensus 356 ~Ii~~c~~~gKPviva 371 (570)
+++..|+++|.++.+.
T Consensus 282 ~i~~~A~~~g~~~~~~ 297 (359)
T 1mdl_A 282 RASALAQQFGIPMSSH 297 (359)
T ss_dssp HHHHHHHHTTCCBCCB
T ss_pred HHHHHHHHcCCeEeec
Confidence 7899999999998864
No 291
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=39.75 E-value=2.5e+02 Score=30.59 Aligned_cols=139 Identities=9% Similarity=0.015 Sum_probs=78.1
Q ss_pred hhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHH-HhCCEEEEcCCCcccCCCC----C
Q 008319 274 KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSII-SASDGAMVARGDLGAELPI----E 348 (570)
Q Consensus 274 ~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl-~~sDgImIgrGDLg~eig~----~ 348 (570)
..+++.|+|+|=++ ++--.+..+|+.+ +.+..|-+-+-|.+-+....+.- ..+|.|.+|+--=+..=+- +
T Consensus 79 dlA~~~gAdGVHLg--q~dl~~~~ar~~l---g~~~iiG~S~ht~eea~~A~~~G~~~aDYv~~Gpvf~T~tK~~~~~~~ 153 (540)
T 3nl6_A 79 DVAMAIGADGIHVG--QDDMPIPMIRKLV---GPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAP 153 (540)
T ss_dssp HHHHHTTCSEEEEC--TTSSCHHHHHHHH---CTTSEEEEEECSHHHHHHHHHTCC--CCEEEESCCSCCCCCC----CC
T ss_pred HHHHHcCCCEEEEC--hhhcCHHHHHHHh---CCCCEEEEECCCHHHHHHHHHcCCCCCCEEEEcCCCCCCCCCCcCCCC
Confidence 45667789988776 2322356667666 34555555444433222221110 0179999987422211000 0
Q ss_pred CHHHHHHHHHHHHHH---cCCCEEEEccchhhhhcCCCcChHHHhHHHHHHH--------hCccEEEecccccCCCCHHH
Q 008319 349 DVPLLQEDIIRRCRS---MQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVR--------EGADAVMLSGETAHGKFPLK 417 (570)
Q Consensus 349 ~v~~~qk~Ii~~c~~---~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~--------~G~D~vmLs~ETA~G~yP~e 417 (570)
-=+...+++.+.+++ ..+|++.. -...|.. +...+. .|+|++.+.+.-..-..|.+
T Consensus 154 ~G~~~l~~i~~~~~~~~~~~iPvvAI--------GGI~~~n-----i~~v~~~~~~~g~~~GadgvAVvsaI~~a~dp~~ 220 (540)
T 3nl6_A 154 MGTAGAIRVLDALERNNAHWCRTVGI--------GGLHPDN-----IERVLYQCVSSNGKRSLDGICVVSDIIASLDAAK 220 (540)
T ss_dssp CHHHHHHHHHHHHHHTTCTTCEEEEE--------SSCCTTT-----HHHHHHHCBCTTSSCBCSCEEESHHHHTCTTHHH
T ss_pred CCHHHHHHHHHHHHhhccCCCCEEEE--------cCCCHHH-----HHHHHHhhcccccccCceEEEEeHHHhcCCCHHH
Confidence 113444556665544 47887752 3333332 333444 68999998777666678999
Q ss_pred HHHHHHHHHHHhh
Q 008319 418 AVKVMHTVALRTE 430 (570)
Q Consensus 418 aV~~m~~I~~~aE 430 (570)
+++.+.+++.+.-
T Consensus 221 a~~~l~~~~~~~~ 233 (540)
T 3nl6_A 221 STKILRGLIDKTD 233 (540)
T ss_dssp HHHHHHHHHHCCB
T ss_pred HHHHHHHHHHhCC
Confidence 9999999887644
No 292
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=39.71 E-value=95 Score=32.91 Aligned_cols=126 Identities=11% Similarity=0.093 Sum_probs=69.7
Q ss_pred HHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHHhhcCCCC
Q 008319 356 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPV 435 (570)
Q Consensus 356 ~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~~~~ 435 (570)
-+...|+..|.++++. .|.......+...-..|++.+....+...+ .+..+++...++..+....++.
T Consensus 175 AlA~aaa~~Gi~~~Iv-----------mP~~~s~~k~~~l~~~GAeVv~v~~~~~~d-~~~~~~~~a~~la~~~~~~~~i 242 (435)
T 1jbq_A 175 GLALAAAVRGYRCIIV-----------MPEKMSSEKVDVLRALGAEIVRTPTNARFD-SPESHVGVAWRLKNEIPNSHIL 242 (435)
T ss_dssp HHHHHHHHHTCEEEEE-----------ECSCCCHHHHHHHHHTTCEEEECCC--------CCHHHHHHHHHHHSTTEECC
T ss_pred HHHHHHHHcCCeEEEE-----------eCCCCCHHHHHHHHhCCCEEEEecCCCCcc-hHHHHHHHHHHHHHhcCCeEEe
Confidence 4667789999999874 121122234556667799988775431111 1222455555555443322221
Q ss_pred CCCCCCcccCCCCChhHHHHHHHHHHHhhcC--C-cEEEEcCChHHHHHHHh----cCCCCeEEEEeCCHH
Q 008319 436 SITPPTQFSAHKSHMGDMFAFHSTTMANTLN--T-PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQER 499 (570)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~--a-~Iiv~T~sG~tA~~ls~----~RP~~pIiavt~~~~ 499 (570)
.+ |.+. .++..-..-.+.++.++++ . .||+.+-+|.++.-+++ ..|.+.||++.+...
T Consensus 243 ~q-~~n~-----~n~~ag~~t~a~EI~eQl~~~~D~vVvpvGtGGtlaGi~~~lk~~~p~vrVigVep~gs 307 (435)
T 1jbq_A 243 DQ-YRNA-----SNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGS 307 (435)
T ss_dssp CT-TTCT-----HHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTC
T ss_pred Cc-cCCc-----ccHHHHHHHHHHHHHHHcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCCEEEEEecCCc
Confidence 11 1110 0111111223556777764 4 89999999999877665 479999999998654
No 293
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=39.52 E-value=1.3e+02 Score=30.78 Aligned_cols=150 Identities=16% Similarity=0.152 Sum_probs=84.2
Q ss_pred hhhHHHhhhhhhcCCcE--EEecCCCChhHHHHHHHHHHhcCCCceEEEee-cCcchhhhHHHHHHh--C--CEEEEcCC
Q 008319 267 DKDWEDIKFGVDNQVDF--YAVSFVKDAKVVHELKDYLKSCNADIHVIVKI-ESADSIPNLHSIISA--S--DGAMVARG 339 (570)
Q Consensus 267 ~kD~~dI~~~~~~gvd~--I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKI-Et~~gv~NldeIl~~--s--DgImIgrG 339 (570)
..|.+-++.+++.|.+. +.-|.-. +....+-....+.+ ..++++- ...+-++.+-+.+.. . +-|++.||
T Consensus 141 T~~~eV~eaAleagag~~~lINsv~~--~~~~~m~~laa~~g--~~vVlmh~~d~~~~~~l~~~a~~~GI~~e~IIlDPg 216 (323)
T 4djd_D 141 EKDHEVLEAVAEAAAGENLLLGNAEQ--ENYKSLTAACMVHK--HNIIARSPLDINICKQLNILINEMNLPLDHIVIDPS 216 (323)
T ss_dssp HHHHHHHHHHHHHTTTSCCEEEEEBT--TBCHHHHHHHHHHT--CEEEEECSSCHHHHHHHHHHHHTTTCCGGGEEEECC
T ss_pred CCCHHHHHHHHHhcCCCCCeEEECCc--ccHHHHHHHHHHhC--CeEEEEccchHHHHHHHHHHHHHcCCCHHHEEEeCC
Confidence 46778888888888652 3233211 12233334444433 4455542 122333333333433 3 45899888
Q ss_pred CcccCCCCCCHHHHHHHHHHHH----HHcCCCEEEEccchhhhhcC-------------CCcChH---HHhHHHHHHHhC
Q 008319 340 DLGAELPIEDVPLLQEDIIRRC----RSMQKPVIVATNMLESMIDH-------------PTPTRA---EVSDIAIAVREG 399 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c----~~~gKPvivaTqmLeSM~~~-------------~~PtrA---Ev~Dv~nav~~G 399 (570)
=....-+.+.-...++++=+.+ +..|-|+++..- -+|++.. +...|. |+.-...++.-|
T Consensus 217 ~g~fgk~~e~~l~~l~~ir~~al~~~~~lg~PvL~GvS-rksf~~ke~~~~~~~~~~~g~~~~~~~~~E~~~a~~~~~~~ 295 (323)
T 4djd_D 217 IGGLGYGIEYSFSIMERIRLGALQGDKMLSMPVICTVG-YEAWRAKEASAPVSEYPGWGKETERGILWEAVTATALLQAG 295 (323)
T ss_dssp CCCTTTTHHHHHHHHHHHHHHHHHTCGGGCSCBEEEHH-HHHHTSHHHHCCTTTCGGGCCHHHHHHHHHHHHHHHHHTTT
T ss_pred CccccCCHHHHHHHHHHHHHHhhcccccCCCCEEEecc-hhhhhhccccccccccccccccchhhHHHHHHHHHHHHHhc
Confidence 7544445555555566555432 368999997521 1233332 111122 344457778899
Q ss_pred ccEEEecccccCCCCHHHHHHHHHHHHHHh
Q 008319 400 ADAVMLSGETAHGKFPLKAVKVMHTVALRT 429 (570)
Q Consensus 400 ~D~vmLs~ETA~G~yP~eaV~~m~~I~~~a 429 (570)
+|.++| ++| ++|+++++.+...
T Consensus 296 ~~i~v~-------~~p-~~~~~~~~~~~~l 317 (323)
T 4djd_D 296 AHILLM-------RHP-EAVARVKENIDQL 317 (323)
T ss_dssp CSEEEE-------CCH-HHHHHHHHHHHHH
T ss_pred CCEEEE-------cCH-HHHHHHHHHHHHH
Confidence 999999 467 8899988887653
No 294
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=39.17 E-value=1.4e+02 Score=29.50 Aligned_cols=129 Identities=9% Similarity=0.013 Sum_probs=64.7
Q ss_pred hhhH-HHhhhhhhcCCc---EEEecCC-----------CChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-
Q 008319 267 DKDW-EDIKFGVDNQVD---FYAVSFV-----------KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA- 330 (570)
Q Consensus 267 ~kD~-~dI~~~~~~gvd---~I~~SfV-----------~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~- 330 (570)
..|. +.++.+.+.|+| +|-+.|- .+.+.+.++-+.+.+. .+++++.|+=.--..+++.++++.
T Consensus 105 ~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~-~~~Pv~vK~~~~~~~~~~~~~a~~~ 183 (314)
T 2e6f_A 105 VEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLA-YGLPFGVKMPPYFDIAHFDTAAAVL 183 (314)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHH-HCSCEEEEECCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHh-cCCCEEEEECCCCCHHHHHHHHHHH
Confidence 3444 444555677899 8877653 1333332222222221 157899998432222344444432
Q ss_pred -----CCEEEEcCCC---cccC-------C-------CC--CCHHHHHHHHHHHHH-Hc-CCCEEEEccchhhhhcCCCc
Q 008319 331 -----SDGAMVARGD---LGAE-------L-------PI--EDVPLLQEDIIRRCR-SM-QKPVIVATNMLESMIDHPTP 384 (570)
Q Consensus 331 -----sDgImIgrGD---Lg~e-------i-------g~--~~v~~~qk~Ii~~c~-~~-gKPvivaTqmLeSM~~~~~P 384 (570)
+|+|.+.-.- +.++ + |+ +.+....-..++..+ .. +.|+|.. ...-
T Consensus 184 ~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~~---------GGI~ 254 (314)
T 2e6f_A 184 NEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFGC---------GGVY 254 (314)
T ss_dssp HTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEEE---------SSCC
T ss_pred HhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEEE---------CCCC
Confidence 6787654211 0000 0 11 112122224444444 44 7888853 3332
Q ss_pred ChHHHhHHHHHHHhCccEEEeccc
Q 008319 385 TRAEVSDIAIAVREGADAVMLSGE 408 (570)
Q Consensus 385 trAEv~Dv~nav~~G~D~vmLs~E 408 (570)
+ ..|+..++..|+|+|++..-
T Consensus 255 ~---~~da~~~l~~GAd~V~ig~~ 275 (314)
T 2e6f_A 255 S---GEDAFLHILAGASMVQVGTA 275 (314)
T ss_dssp S---HHHHHHHHHHTCSSEEECHH
T ss_pred C---HHHHHHHHHcCCCEEEEchh
Confidence 3 34677888899999999643
No 295
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=39.14 E-value=35 Score=34.91 Aligned_cols=57 Identities=18% Similarity=0.227 Sum_probs=35.0
Q ss_pred CCCHHHHHHHHHhCCcEEEEecCCCCh-----H--HHHHHHHHHHHHHhhcCCCcEEEEeecCC
Q 008319 111 TSSREMIWKLAEEGMNVARLNMSHGDH-----A--SHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (570)
Q Consensus 111 ~~~~e~l~~li~~Gm~v~RiN~sHg~~-----e--~~~~~i~~ir~~~~~~~~~~i~I~~Dl~G 167 (570)
..+.+.++.|.+.|+|++||-++.... . .-.+.++.++++...+..+-+.+++|+-.
T Consensus 62 ~~~~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~~~vv~~a~~~Gi~vildlH~ 125 (376)
T 3ayr_A 62 KTTEDMFKVLIDNQFNVFRIPTTWSGHFGEAPDYKIDEKWLKRVHEVVDYPYKNGAFVILNLHH 125 (376)
T ss_dssp CCCHHHHHHHHHTTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred cCcHHHHHHHHHcCCCEEEEeeEChhhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEECCC
Confidence 457899999999999999998864310 0 01122333333332222245788899865
No 296
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=38.89 E-value=1.3e+02 Score=30.38 Aligned_cols=94 Identities=18% Similarity=0.206 Sum_probs=53.8
Q ss_pred HHHHh-CCEEEEcCCCcc--cCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHH-HhHHHHHHHhCcc
Q 008319 326 SIISA-SDGAMVARGDLG--AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGAD 401 (570)
Q Consensus 326 eIl~~-sDgImIgrGDLg--~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D 401 (570)
..++. +|||++. |=-| ..+..++-..+.+..++.++ -..|||.- ....+-+| +.-.-.|-..|+|
T Consensus 52 ~li~~Gv~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~-grvpViaG---------vg~~st~eai~la~~A~~~Gad 120 (314)
T 3qze_A 52 FHLQEGTNAIVAV-GTTGESATLDVEEHIQVIRRVVDQVK-GRIPVIAG---------TGANSTREAVALTEAAKSGGAD 120 (314)
T ss_dssp HHHHHTCCEEEES-SGGGTGGGCCHHHHHHHHHHHHHHHT-TSSCEEEE---------CCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEe---------CCCcCHHHHHHHHHHHHHcCCC
Confidence 33444 8999983 1111 12222333333344444432 23688864 23334445 5556677788999
Q ss_pred EEEecccccCCCCHHHHHHHHHHHHHHhh
Q 008319 402 AVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (570)
Q Consensus 402 ~vmLs~ETA~G~yP~eaV~~m~~I~~~aE 430 (570)
++|+..=--...-+-+.++....|+..+.
T Consensus 121 avlv~~P~y~~~s~~~l~~~f~~va~a~~ 149 (314)
T 3qze_A 121 ACLLVTPYYNKPTQEGMYQHFRHIAEAVA 149 (314)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHHHSC
T ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 99986432233335678999999998875
No 297
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}
Probab=38.83 E-value=2.8e+02 Score=28.16 Aligned_cols=120 Identities=11% Similarity=0.083 Sum_probs=72.0
Q ss_pred HHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHHhhcCCC
Q 008319 355 EDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLP 434 (570)
Q Consensus 355 k~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~~~ 434 (570)
.-+...|++.|.++.+. .|...........-..|++.+... |.| -++.+...++..+-. ..+
T Consensus 121 ~a~A~aa~~~G~~~~iv-----------~P~~~~~~k~~~~~~~GA~V~~v~-----~~~-~~~~~~a~~~~~~~~-~~~ 182 (366)
T 3iau_A 121 QGVALAGQRLNCVAKIV-----------MPTTTPQIKIDAVRALGGDVVLYG-----KTF-DEAQTHALELSEKDG-LKY 182 (366)
T ss_dssp HHHHHHHHHTTCCEEEE-----------ECTTCCHHHHHHHHHTTCEEEECC-----SSH-HHHHHHHHHHHHHHT-CEE
T ss_pred HHHHHHHHHhCCceEEE-----------eCCCCCHHHHHHHHHCCCeEEEEC-----cCH-HHHHHHHHHHHHhcC-CEe
Confidence 34566789999998874 122222334566678899977664 333 467777766665432 221
Q ss_pred CCCCCCCcccCCCCChhHHHHHHHHHHHhhcCC--cEEEEcCChHHHHHHHh----cCCCCeEEEEeCCHH
Q 008319 435 VSITPPTQFSAHKSHMGDMFAFHSTTMANTLNT--PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQER 499 (570)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a--~Iiv~T~sG~tA~~ls~----~RP~~pIiavt~~~~ 499 (570)
..+ |.+. .........+.++.++++. .|++.+-+|.++--+++ +.|.+.|+++.++..
T Consensus 183 i~~-~~n~------~~i~g~~t~~~Ei~~q~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigVe~~~~ 246 (366)
T 3iau_A 183 IPP-FDDP------GVIKGQGTIGTEINRQLKDIHAVFIPVGGGGLIAGVATFFKQIAPNTKIIGVEPYGA 246 (366)
T ss_dssp CCS-SSSH------HHHHHHHHHHHHHHHHCCSEEEEEEECSSSHHHHHHHHHHHHHSTTSEEEEEEEGGG
T ss_pred cCC-CCCh------HHHHHHHHHHHHHHHhcCCCCEEEEccCchHHHHHHHHHHHHhCCCCeEEEEeecCC
Confidence 111 1110 0112222234567777765 78899999988766554 469999999988654
No 298
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=38.80 E-value=39 Score=32.90 Aligned_cols=53 Identities=11% Similarity=0.144 Sum_probs=33.1
Q ss_pred CCHHHHHHHH-HhCCcEEEEecCCC-------ChHHHHHHHHHHHHHHhhcCCCcEEEEeecCC
Q 008319 112 SSREMIWKLA-EEGMNVARLNMSHG-------DHASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (570)
Q Consensus 112 ~~~e~l~~li-~~Gm~v~RiN~sHg-------~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~G 167 (570)
-+.+.++.|. +.|+|++|+-+... +++...+.++.+=+...+.+ +.+++|+-+
T Consensus 39 ~~~~d~~~l~~~~G~N~vR~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~G---i~vild~h~ 99 (291)
T 1egz_A 39 YTADTVASLKKDWKSSIVRAAMGVQESGGYLQDPAGNKAKVERVVDAAIAND---MYAIIGWHS 99 (291)
T ss_dssp CSHHHHHHHHHTTCCCEEEEEEECSSTTSTTTCHHHHHHHHHHHHHHHHHTT---CEEEEEEEC
T ss_pred CCHHHHHHHHHHcCCCEEEEeccccccCCCcCCHHHHHHHHHHHHHHHHHCC---CEEEEEcCC
Confidence 4678999999 79999999987643 22333333333333333444 667778643
No 299
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=38.75 E-value=1.1e+02 Score=30.64 Aligned_cols=125 Identities=8% Similarity=-0.005 Sum_probs=70.2
Q ss_pred HHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHHhhcCC
Q 008319 354 QEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSL 433 (570)
Q Consensus 354 qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~~ 433 (570)
-.-+...|+..|.++.+.. -....| ...+...-..|++.+...++... .++.++.+...+++.+-...+
T Consensus 84 g~alA~~a~~~G~~~~iv~------p~~~~~----~~k~~~~~~~GA~v~~~~~~~~~-~~~~~~~~~a~~l~~~~~~~~ 152 (325)
T 1j0a_A 84 AFVTGLAAKKLGLDAILVL------RGKEEL----KGNYLLDKIMGIETRVYDAKDSF-ELMKYAEEIAEELKREGRKPY 152 (325)
T ss_dssp HHHHHHHHHHTTCEEEEEE------ESCCCS----CHHHHHHHHTTCEEEEESCCSTT-THHHHHHHHHHHHTTSSCCEE
T ss_pred HHHHHHHHHHhCCcEEEEE------CCCCCC----CchHHHHHHCCCEEEEeCcchhh-hhhHHHHHHHHHHHHcCCceE
Confidence 3456778999999987741 111101 22344556789998887544321 112345555444432211101
Q ss_pred CCCCCCCCcccCCCCChh--HHHHHHHHHHHhhcC--C-cEEEEcCChHHHHHHHh----cCCCCeEEEEeCC
Q 008319 434 PVSITPPTQFSAHKSHMG--DMFAFHSTTMANTLN--T-PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQ 497 (570)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~--~~ia~~av~~a~~~~--a-~Iiv~T~sG~tA~~ls~----~RP~~pIiavt~~ 497 (570)
.. ... .. ++. +.....+.++.++++ . .||+..-+|.|+.-+++ +.|.+.|++|-+.
T Consensus 153 ~~----p~~---~~-n~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vGtGGt~~Gi~~~lk~~~~~~~vigVe~~ 217 (325)
T 1j0a_A 153 VI----PPG---GA-SPIGTLGYVRAVGEIATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVG 217 (325)
T ss_dssp EE----CGG---GC-SHHHHTHHHHHHHHHHHHCCCCCSEEEEEESSSHHHHHHHHHHHHTTCCCEEEEEECS
T ss_pred EE----cCC---CC-CHHHHHHHHHHHHHHHHhhCCCCCEEEEeCCchHhHHHHHHHHHhcCCCceEEEEEec
Confidence 10 000 01 121 222233567777775 4 79999999999876664 5799999999885
No 300
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=38.17 E-value=2e+02 Score=28.28 Aligned_cols=119 Identities=14% Similarity=0.096 Sum_probs=71.5
Q ss_pred HHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHHhhcCCCC
Q 008319 356 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPV 435 (570)
Q Consensus 356 ~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~~~~ 435 (570)
-+...|++.|.++.+.- |.......+...-..|++.+...++. . .-++++...++..+-. .++.
T Consensus 79 a~A~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~~---~-~~~~~~~a~~~~~~~~-~~~~ 142 (303)
T 1o58_A 79 AIAMIGAKRGHRVILTM-----------PETMSVERRKVLKMLGAELVLTPGEL---G-MKGAVEKALEISRETG-AHML 142 (303)
T ss_dssp HHHHHHHHHTCCEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGGG---H-HHHHHHHHHHHHHHHC-CBCC
T ss_pred HHHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHHcCCEEEEECCCC---C-HHHHHHHHHHHHHhcC-eEeC
Confidence 56677899999988741 21112234556677899988764321 1 3366666666654432 2111
Q ss_pred CCCCCCcccCCCCChhHHH---HHHHHHHHhhcC--C-cEEEEcCChHHHHHHHhc----CCC-CeEEEEeCCHH
Q 008319 436 SITPPTQFSAHKSHMGDMF---AFHSTTMANTLN--T-PIIVFTRTGSMAVILSHY----RPS-STIFAFTNQER 499 (570)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~i---a~~av~~a~~~~--a-~Iiv~T~sG~tA~~ls~~----RP~-~pIiavt~~~~ 499 (570)
.+ |. ++.... ...+.++.++++ . .||+.+-+|.++.-++++ .|. ..||++.+...
T Consensus 143 ~~-~~--------n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~~vigve~~~~ 208 (303)
T 1o58_A 143 NQ-FE--------NPYNVYSHQFTTGPEILKQMDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEPAKS 208 (303)
T ss_dssp CT-TT--------CHHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHHGGGSEEEEEEETTS
T ss_pred CC-CC--------CHHHHHHHHHHHHHHHHHHcCCCCCEEEEeeCCcccHHHHHHHHHHhCCCCCEEEEEecCCC
Confidence 11 11 121111 223456777775 4 799999999998777654 588 99999998654
No 301
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=38.04 E-value=3.1e+02 Score=27.17 Aligned_cols=125 Identities=12% Similarity=0.139 Sum_probs=75.7
Q ss_pred HHhhhhhhcCCcEEEecCC--C---------ChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHhCCEEEEcCC
Q 008319 271 EDIKFGVDNQVDFYAVSFV--K---------DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARG 339 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV--~---------sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDgImIgrG 339 (570)
+-++.+.+.|+|.+-.-+- + ..+.+..++++.++.| +.++.-+-.++.++-+.+. +|.+-||-+
T Consensus 56 ~~a~~~k~~ga~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~~G--l~~~te~~d~~~~~~l~~~---vd~~kIgs~ 130 (276)
T 1vs1_A 56 EAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEAG--LPVVTEVLDPRHVETVSRY---ADMLQIGAR 130 (276)
T ss_dssp HHHHHHHHHTCSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHT--CCEEEECCCGGGHHHHHHH---CSEEEECGG
T ss_pred HHHHHHHHhCCCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHHcC--CcEEEecCCHHHHHHHHHh---CCeEEECcc
Confidence 3344555778887633211 1 1456677888876654 6788877777776666554 799999976
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHH-hCc-cEEEec-ccccCCCCHH
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVR-EGA-DAVMLS-GETAHGKFPL 416 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~-~G~-D~vmLs-~ETA~G~yP~ 416 (570)
++- . -.+++.+.+.||||++.|.| ..|..|+...++++. .|. +.+++- +=+..-.||.
T Consensus 131 ~~~------n-----~~ll~~~a~~~kPV~lk~G~--------~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~ 191 (276)
T 1vs1_A 131 NMQ------N-----FPLLREVGRSGKPVLLKRGF--------GNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTR 191 (276)
T ss_dssp GTT------C-----HHHHHHHHHHTCCEEEECCT--------TCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSS
T ss_pred ccc------C-----HHHHHHHHccCCeEEEcCCC--------CCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCc
Confidence 652 2 23455555789999985432 246778777777665 465 444442 3223324554
Q ss_pred HHH
Q 008319 417 KAV 419 (570)
Q Consensus 417 eaV 419 (570)
+.|
T Consensus 192 ~~v 194 (276)
T 1vs1_A 192 FTL 194 (276)
T ss_dssp SBC
T ss_pred chh
Confidence 443
No 302
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=38.03 E-value=1.5e+02 Score=29.27 Aligned_cols=118 Identities=11% Similarity=0.041 Sum_probs=68.4
Q ss_pred HHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHHhhcCCCC
Q 008319 356 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPV 435 (570)
Q Consensus 356 ~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~~~~ 435 (570)
-+...|+..|.++.+.- |.......+...-..|++.+...+. | -++.+...++..+-. .++.
T Consensus 79 alA~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~-----~-~~~~~~a~~~~~~~~-~~~~ 140 (311)
T 1ve5_A 79 GVAYAAQVLGVKALVVM-----------PEDASPYKKACARAYGAEVVDRGVT-----A-KNREEVARALQEETG-YALI 140 (311)
T ss_dssp HHHHHHHHHTCCEEEEC-----------CCC--CCHHHHHHHTTCEEECTTCC-----T-TTHHHHHHHHHHHHC-CEEC
T ss_pred HHHHHHHHcCCCEEEEE-----------CCCCCHHHHHHHHHcCCEEEEECCC-----H-HHHHHHHHHHHHhcC-cEec
Confidence 46677899999998741 1111122455667789988754332 3 356666666655422 2111
Q ss_pred CCCCCCcccCCCCChhHHHHHHHHHHHhhc-----CC-cEEEEcCChHHHHHHHh----cCCCCeEEEEeCCH
Q 008319 436 SITPPTQFSAHKSHMGDMFAFHSTTMANTL-----NT-PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQE 498 (570)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~ia~~av~~a~~~-----~a-~Iiv~T~sG~tA~~ls~----~RP~~pIiavt~~~ 498 (570)
.+ |.+. .....-...+.++.+++ .. .|++.+-+|.++--+++ ..|...|+++.+..
T Consensus 141 ~~-~~n~------~~~~g~~t~~~Ei~~q~~~~~~~~d~vvvpvG~Gg~~~Gi~~~~k~~~~~~~vigve~~~ 206 (311)
T 1ve5_A 141 HP-FDDP------LVIAGQGTAGLELLAQAGRMGVFPGAVLAPVGGGGLLAGLATAVKALSPTTLVLGVEPEA 206 (311)
T ss_dssp CS-SSSH------HHHHHHHHHHHHHHHHHHHHTCCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGG
T ss_pred CC-CCCc------chhhhccHHHHHHHHHHHhcCCCCCEEEEccCchHHHHHHHHHHHHhCCCCEEEEEEeCC
Confidence 11 1110 11112222334555555 24 79999999999777664 47999999999865
No 303
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=37.99 E-value=30 Score=36.54 Aligned_cols=43 Identities=28% Similarity=0.381 Sum_probs=34.0
Q ss_pred EecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHH
Q 008319 105 CTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKE 149 (570)
Q Consensus 105 ~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~ 149 (570)
+.+|+.. .+.++.++++|++++=|+.+||.++.+.++++.+|+
T Consensus 139 ~~v~~~~--~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~ 181 (400)
T 3ffs_A 139 AAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKS 181 (400)
T ss_dssp EEECCC---CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHT
T ss_pred eecCCCH--HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHh
Confidence 3456543 789999999999999999999988777777766663
No 304
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=37.54 E-value=1.2e+02 Score=30.01 Aligned_cols=101 Identities=15% Similarity=0.190 Sum_probs=57.3
Q ss_pred hhH-HHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCC-CceEEEee-------c--CcchhhhHHHHHHhCCEEEE
Q 008319 268 KDW-EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNA-DIHVIVKI-------E--SADSIPNLHSIISASDGAMV 336 (570)
Q Consensus 268 kD~-~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~-~i~IiaKI-------E--t~~gv~NldeIl~~sDgImI 336 (570)
.|. +-|+.+.+.|++.+.+.- -+.++...+.++.++... ...+++-+ . +.+-++.|++.++.-..+.|
T Consensus 17 ~d~~~vl~~a~~~gV~~~v~~g-~~~~~~~~~~~la~~~~~~~~~v~~~~GiHP~~~~~~~~~~~~~l~~l~~~~~vvaI 95 (287)
T 3rcm_A 17 DQQAAIVERALEAGVTQMLLTG-TSLAVSEQALELCQQLDASGAHLFATAGVHPHDAKAWDTDSERQLRLLLSEPRVRAV 95 (287)
T ss_dssp TCHHHHHHHHHHTTEEEEEECC-CSHHHHHHHHHHHHHHCTTSSSEEEEECCCGGGGGGCCTTHHHHHHHHHTSTTEEEE
T ss_pred cCHHHHHHHHHHcCCeEEEEec-CCHHHHHHHHHHHHhCCCCCceEEEEEEECcCccccCCHHHHHHHHHHhcCCCeEEE
Confidence 354 445778889999876663 366777666665544322 12233332 1 12334555555544345555
Q ss_pred cCCCcccCCCCC-CHHHHH----HHHHHHHHHcCCCEEEE
Q 008319 337 ARGDLGAELPIE-DVPLLQ----EDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 337 grGDLg~eig~~-~v~~~q----k~Ii~~c~~~gKPviva 371 (570)
| ..|.+.... .-...| ++.++.|++.|+||++-
T Consensus 96 G--EiGLD~~~~~~~~~~Q~~~F~~ql~lA~e~~lPv~iH 133 (287)
T 3rcm_A 96 G--ECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVFLH 133 (287)
T ss_dssp E--EEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred E--EeeeCCCcccCcHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 4 555554321 123445 47788899999999974
No 305
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=37.24 E-value=1.5e+02 Score=28.62 Aligned_cols=38 Identities=13% Similarity=0.142 Sum_probs=24.3
Q ss_pred HHhhhhhhcCCcEEEecCCC------ChhHHHHHHHHHHhcCCC
Q 008319 271 EDIKFGVDNQVDFYAVSFVK------DAKVVHELKDYLKSCNAD 308 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~------sa~dv~~vr~~l~~~~~~ 308 (570)
+.++.+.+.|+|+|-+.+.. ...++.++++.+++.|-.
T Consensus 40 ~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 83 (296)
T 2g0w_A 40 KRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMK 83 (296)
T ss_dssp HHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCE
T ss_pred HHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCc
Confidence 45677889999999887521 223455566666665443
No 306
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=37.23 E-value=1.7e+02 Score=28.09 Aligned_cols=114 Identities=19% Similarity=0.221 Sum_probs=60.4
Q ss_pred hhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHhCCE-EEEcC-CC-cccCCCCCCHHH
Q 008319 276 GVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDG-AMVAR-GD-LGAELPIEDVPL 352 (570)
Q Consensus 276 ~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDg-ImIgr-GD-Lg~eig~~~v~~ 352 (570)
+.+.|+|+|.++-.. .+++.++.+.+++.|.+..+... .....+.+.++.+..++ +.+.. +. -|..-+.+ +.
T Consensus 114 a~~aGadgv~v~d~~-~~~~~~~~~~~~~~g~~~i~~~a--~~t~~e~~~~~~~~~~g~v~~~s~~G~tG~~~~~~--~~ 188 (262)
T 1rd5_A 114 MKEAGVHGLIVPDLP-YVAAHSLWSEAKNNNLELVLLTT--PAIPEDRMKEITKASEGFVYLVSVNGVTGPRANVN--PR 188 (262)
T ss_dssp HHHTTCCEEECTTCB-TTTHHHHHHHHHHTTCEECEEEC--TTSCHHHHHHHHHHCCSCEEEECSSCCBCTTSCBC--TH
T ss_pred HHHcCCCEEEEcCCC-hhhHHHHHHHHHHcCCceEEEEC--CCCCHHHHHHHHhcCCCeEEEecCCCCCCCCcCCC--ch
Confidence 668899998887443 24466666667666654323222 32345677777777653 44432 11 12211211 12
Q ss_pred HHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 353 LQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 353 ~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
..+.+-+..+..+.|+++. ...-|. .++..+...|+|++..-
T Consensus 189 ~~~~i~~v~~~~~~pI~vg---------GGI~~~---e~~~~~~~~GAdgvvVG 230 (262)
T 1rd5_A 189 VESLIQEVKKVTNKPVAVG---------FGISKP---EHVKQIAQWGADGVIIG 230 (262)
T ss_dssp HHHHHHHHHHHCSSCEEEE---------SCCCSH---HHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHhhcCCeEEEE---------CCcCCH---HHHHHHHHcCCCEEEEC
Confidence 2222222233347898874 222222 24556677899999874
No 307
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=37.23 E-value=2.3e+02 Score=28.83 Aligned_cols=129 Identities=18% Similarity=0.179 Sum_probs=67.2
Q ss_pred CCChhhHHHh--------hhhhhcCCcEEEec---------CC----CChh---------H---HHHHHHHH-HhcCCCc
Q 008319 264 SITDKDWEDI--------KFGVDNQVDFYAVS---------FV----KDAK---------V---VHELKDYL-KSCNADI 309 (570)
Q Consensus 264 ~lt~kD~~dI--------~~~~~~gvd~I~~S---------fV----~sa~---------d---v~~vr~~l-~~~~~~i 309 (570)
.||..|++.+ +.+.+.|+|+|=+- |. +... + +.++-+.+ +..+.+.
T Consensus 132 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~ 211 (343)
T 3kru_A 132 ELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENK 211 (343)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTS
T ss_pred hcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccC
Confidence 6888888777 34567899999765 22 1111 1 12222222 2346677
Q ss_pred eEEEeecCcc------hhhhHHHHHHh----CCEEEEcCCCccc-CCCCCCHHHHHHHHHHHHH-HcCCCEEEEccchhh
Q 008319 310 HVIVKIESAD------SIPNLHSIISA----SDGAMVARGDLGA-ELPIEDVPLLQEDIIRRCR-SMQKPVIVATNMLES 377 (570)
Q Consensus 310 ~IiaKIEt~~------gv~NldeIl~~----sDgImIgrGDLg~-eig~~~v~~~qk~Ii~~c~-~~gKPvivaTqmLeS 377 (570)
.|..||--.+ .+++.-++++. +|.|-+.-|...- .++.. +..+-..++..+ ..+.|||....
T Consensus 212 pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~vd~i~vs~g~~~~~~~~~~--~~~~~~~~~~ir~~~~iPVi~~Gg---- 285 (343)
T 3kru_A 212 PIFVRVSADDYMEGGINIDMMVEYINMIKDKVDLIDVSSGGLLNVDINLY--PGYQVKYAETIKKRCNIKTSAVGL---- 285 (343)
T ss_dssp CEEEEEECCCSSTTSCCHHHHHHHHHHHTTTCSEEEEECCCSSCCCCCCC--TTTTHHHHHHHHHHHTCEEEEESS----
T ss_pred CeEEEeechhhhccCccHHHHHHHHHHhhccccEEeccCCceEeeeeccc--CceeehHHHHHHHhcCcccceeee----
Confidence 8888884321 13333344433 7888885443321 11111 111222333333 34799886422
Q ss_pred hhcCCCcChHHHhHHHHHHHhC-ccEEEec
Q 008319 378 MIDHPTPTRAEVSDIAIAVREG-ADAVMLS 406 (570)
Q Consensus 378 M~~~~~PtrAEv~Dv~nav~~G-~D~vmLs 406 (570)
.-+.. +...++..| +|+|++.
T Consensus 286 -----i~t~e---~Ae~~l~~G~aD~V~iG 307 (343)
T 3kru_A 286 -----ITTQE---LAEEILSNERADLVALG 307 (343)
T ss_dssp -----CCCHH---HHHHHHHTTSCSEEEES
T ss_pred -----eeHHH---HHHHHHhchhhHHHHHH
Confidence 22222 344677888 9999985
No 308
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=37.15 E-value=1.7e+02 Score=29.12 Aligned_cols=95 Identities=17% Similarity=0.035 Sum_probs=53.7
Q ss_pred HHHHHh-CCEEEEcCCCc--ccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHH-HhHHHHHHHhCc
Q 008319 325 HSIISA-SDGAMVARGDL--GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (570)
Q Consensus 325 deIl~~-sDgImIgrGDL--g~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~ 400 (570)
+-.++. +|||++. |=- +..+..++-..+.+..++.++ -..|||.- ....+-.| +.-.-.|-..|+
T Consensus 39 ~~li~~Gv~Gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~-grvpViaG---------vg~~~t~~ai~la~~A~~~Ga 107 (303)
T 2wkj_A 39 QFNIQQGIDGLYVG-GSTGEAFVQSLSEREQVLEIVAEEAK-GKIKLIAH---------VGCVSTAESQQLAASAKRYGF 107 (303)
T ss_dssp HHHHHTTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEEE---------CCCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEEC-eeccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEe---------cCCCCHHHHHHHHHHHHhCCC
Confidence 334444 8999984 111 112222333333334443332 24688764 23334445 444556677899
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHHHhh
Q 008319 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (570)
Q Consensus 401 D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE 430 (570)
|++|+..=--...-+-+.++....|+..+.
T Consensus 108 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 137 (303)
T 2wkj_A 108 DAVSAVTPFYYPFSFEEHCDHYRAIIDSAD 137 (303)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHHT
T ss_pred CEEEecCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 999986432223345778889999998876
No 309
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=37.06 E-value=3.1e+02 Score=26.94 Aligned_cols=96 Identities=9% Similarity=-0.038 Sum_probs=54.3
Q ss_pred HHhhhhhhcCCcEEEec------CCCChhHHHHHHHHHHhcCCCceEEEeec---CcchhhhHHHHHHh-CCEEEEcCCC
Q 008319 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHELKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARGD 340 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S------fV~sa~dv~~vr~~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDgImIgrGD 340 (570)
+.++|-++.|+|++.+. +.=+.++-.++-+...+.-.. ||+-+= |.++++.....-+. +|++++-+-.
T Consensus 24 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--ViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 101 (288)
T 2nuw_A 24 THAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK--LIFQVGSLNLNDVMELVKFSNEMDILGVSSHSPY 101 (288)
T ss_dssp HHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC--EEEECCCSCHHHHHHHHHHHHTSCCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--eEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 45567789999998763 223333333333333222222 888773 46666666665555 8999997654
Q ss_pred cccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 341 LGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 341 Lg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
+.-. +.-..+.+..-..|.+.+.|+++.
T Consensus 102 y~~~---~s~~~l~~~f~~va~a~~lPiilY 129 (288)
T 2nuw_A 102 YFPR---LPEKFLAKYYEEIARISSHSLYIY 129 (288)
T ss_dssp SSCS---CCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCC---CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 4220 122233334444556678999975
No 310
>3kw2_A Probable R-RNA methyltransferase; structural genomics, unknown function, PSI-2, protein structure initiative; HET: MSE ADN; 2.00A {Porphyromonas gingivalis atcc 33277}
Probab=37.06 E-value=1e+02 Score=30.24 Aligned_cols=116 Identities=11% Similarity=0.111 Sum_probs=61.4
Q ss_pred ccccCCEEEEeCC---eeEEEEEEEeCCeEEEEEEeCcEeccCcccccCCCccCCC-CCChh-hH--HHhhhhhhcCCcE
Q 008319 211 DVEVGDILLVDGG---MMSLAVKSKTKDLVKCIVVDGGELKSRRHLNVRGKSANLP-SITDK-DW--EDIKFGVDNQVDF 283 (570)
Q Consensus 211 ~v~~Gd~I~iDDG---~i~l~V~~~~~~~i~~~v~~gG~l~s~KgIn~p~~~~~lp-~lt~k-D~--~dI~~~~~~gvd~ 283 (570)
.+++||.|.+-|| ....+|.+++++.+.+++..--..... |...+.|- .++.+ |+ .-|+.+.+.|++-
T Consensus 32 Rl~~Gd~v~l~dg~g~~~~a~I~~i~~~~~~~~i~~~~~~~~e-----~~~~i~L~~al~K~~dr~d~iiqKatELGV~~ 106 (257)
T 3kw2_A 32 RMQAGDRLRLTDGRGSFFDAVIETADRKSCYVSVCGQESWQKP-----WRDRITIAIAPTKQSERMEWMLEKLVEIGVDE 106 (257)
T ss_dssp CCCTTCEEEEECSBSEEEEEEEEEECSSCEEEEEEEEEECCCS-----SCSCEEEEECCCSSHHHHHHHHHHHHHHCCSE
T ss_pred cCCCCCEEEEEECCCCEEEEEEEEeeCCEEEEEEEEecccCCC-----CCCceEEEEecCCCcchHHHHHHHHHhhCCCE
Confidence 4578999998765 356788888888888887652111111 11111111 23332 43 4457889999997
Q ss_pred EEecCCC----ChhHHHHHH----HHHHhcCCCceEEEeecCcchhhhHHHHHHh---CCEEEE
Q 008319 284 YAVSFVK----DAKVVHELK----DYLKSCNADIHVIVKIESADSIPNLHSIISA---SDGAMV 336 (570)
Q Consensus 284 I~~SfV~----sa~dv~~vr----~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~---sDgImI 336 (570)
|..=..+ .......++ +..++++.. .+.+|+.+.. +++.++. .|..++
T Consensus 107 I~p~~s~rs~k~~~k~eRw~~I~~eAaeQs~R~--~~P~v~~~~~---~~~~l~~~~~~~~~li 165 (257)
T 3kw2_A 107 VVFIESEHSERRRIKAERLERIAISAMKQSLKA--SFPVIRVNIP---IQTVIADTPKAAVRLI 165 (257)
T ss_dssp EEEEECTTSCCSCCCHHHHHHHHHHHHHHTTCS--BCCEEEEEEE---HHHHHHHSCTTSEEEE
T ss_pred EEEEEeecchhhhhhHHHHHHHHHHHHHHcCCC--cCCEecCcCC---HHHHHhhccccCCEEE
Confidence 6432221 112233433 344555543 4556655544 4444433 444444
No 311
>2dpr_A CON-T(K7GLA); conantoxin, nmdar antagonist, GLA-containing, metal B protein; HET: CGU; 1.70A {Synthetic} PDB: 1ont_A*
Probab=36.96 E-value=24 Score=22.36 Aligned_cols=17 Identities=12% Similarity=0.227 Sum_probs=13.9
Q ss_pred hHHHHHHHHHHHHHHhh
Q 008319 137 HASHQKTIDLVKEYNSQ 153 (570)
Q Consensus 137 ~e~~~~~i~~ir~~~~~ 153 (570)
.++.+++++|+|+++-+
T Consensus 2 eeeyqemlenlreaevk 18 (26)
T 2dpr_A 2 EEEYQEMLENLREAEVK 18 (26)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHH
Confidence 36789999999998644
No 312
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15
Probab=36.94 E-value=1.5e+02 Score=29.93 Aligned_cols=93 Identities=14% Similarity=0.150 Sum_probs=54.7
Q ss_pred hhhhhhcCCcEEEecCCCChhH---------------HH----HHHHHHHhcCCCceEEEeecCcchhhhHH----HHHH
Q 008319 273 IKFGVDNQVDFYAVSFVKDAKV---------------VH----ELKDYLKSCNADIHVIVKIESADSIPNLH----SIIS 329 (570)
Q Consensus 273 I~~~~~~gvd~I~~SfV~sa~d---------------v~----~vr~~l~~~~~~i~IiaKIEt~~gv~Nld----eIl~ 329 (570)
++.+++.|+|+|.+=-|.+.+. .. .+.+++...+.+..|+.+ .|.+-++ ++..
T Consensus 128 l~~~~~kG~DGvflDnvD~y~~~~~~~g~~~~~~~~~~~~~i~~La~~ar~~~P~~~ii~n----NG~~i~~~d~~~l~~ 203 (309)
T 2aam_A 128 LDRVIDQGFKGIYLDRIDSFEYWAQEGVISRRSAARKMINFVLEIAEYVRERKPDMLIIPQ----NGENILDFDDGQLAS 203 (309)
T ss_dssp HHHHHHTTCSEEEEECTTHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEB----SCGGGGGGCCSHHHH
T ss_pred HHHHHHcCCCeEeecccchhhhccccCCcchhhhHHHHHHHHHHHHHHHHhhCCCcEEEEe----cCHHhhcccHhHHHh
Confidence 4567789999999987754322 11 122233555666767664 4666566 7778
Q ss_pred hCCEEEEcCCCcccCCC--C-CCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 330 ASDGAMVARGDLGAELP--I-EDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 330 ~sDgImIgrGDLg~eig--~-~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
..||+..-- +-..-. . ++-......-+..++++||||+..
T Consensus 204 ~id~v~~Es--~~~~~~~~~~~~e~~~~~~~l~~~~~~GkpV~~i 246 (309)
T 2aam_A 204 TVSGWAVEN--LFYLKTIPLEENETKSRLEYLIRLNRKGKFILSV 246 (309)
T ss_dssp HCSEEEEES--SSEETTEECCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hcCEEEeee--EEecCCCCCCHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 899988742 211110 0 112222234566777889999974
No 313
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=36.94 E-value=65 Score=32.27 Aligned_cols=83 Identities=19% Similarity=0.197 Sum_probs=54.0
Q ss_pred CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcC-CCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccc
Q 008319 331 SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQ-KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGET 409 (570)
Q Consensus 331 sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~g-KPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ET 409 (570)
.|.||--...-|...|+.. +...+.+++. ... .|||++ ...-| -+|++.++..|+|+|++..--
T Consensus 146 ~~aVmPlg~pIGsG~Gi~~-~~~L~~i~~~--~~~~vPVI~~---------GGI~t---psDAa~AmeLGAdgVlVgSAI 210 (268)
T 2htm_A 146 TATVMPLAAPIGSGWGVRT-RALLELFARE--KASLPPVVVD---------AGLGL---PSHAAEVMELGLDAVLVNTAI 210 (268)
T ss_dssp CSCBEEBSSSTTTCCCSTT-HHHHHHHHHT--TTTSSCBEEE---------SCCCS---HHHHHHHHHTTCCEEEESHHH
T ss_pred CCEEEecCccCcCCcccCC-HHHHHHHHHh--cCCCCeEEEe---------CCCCC---HHHHHHHHHcCCCEEEEChHH
Confidence 6677653444455555544 3443333221 234 799975 33333 357899999999999998777
Q ss_pred cCCCCHHHHHHHHHHHHHH
Q 008319 410 AHGKFPLKAVKVMHTVALR 428 (570)
Q Consensus 410 A~G~yP~eaV~~m~~I~~~ 428 (570)
+.++.|.+-.+.|..-++.
T Consensus 211 ~~a~dP~~ma~af~~Av~a 229 (268)
T 2htm_A 211 AEAQDPPAMAEAFRLAVEA 229 (268)
T ss_dssp HTSSSHHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHH
Confidence 8889998887777765443
No 314
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=36.91 E-value=24 Score=34.88 Aligned_cols=21 Identities=29% Similarity=0.393 Sum_probs=19.1
Q ss_pred CHHHHHHHHHhCCcEEEEecC
Q 008319 113 SREMIWKLAEEGMNVARLNMS 133 (570)
Q Consensus 113 ~~e~l~~li~~Gm~v~RiN~s 133 (570)
+.+.++.|.+.|+|++||-++
T Consensus 33 ~~~di~~~~~~G~n~vRi~i~ 53 (305)
T 1h1n_A 33 DPNTIDTLISKGMNIFRVPFM 53 (305)
T ss_dssp CHHHHHHHHHTTCCEEEEEEC
T ss_pred CHHHHHHHHHCCCCEEEeccc
Confidence 488999999999999999885
No 315
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=36.73 E-value=55 Score=32.89 Aligned_cols=65 Identities=9% Similarity=0.115 Sum_probs=45.6
Q ss_pred hhHHHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEEcC
Q 008319 268 KDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVAR 338 (570)
Q Consensus 268 kD~~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgr 338 (570)
.+.++++.+++.|+|+|++..+ +++++++..+.+. .++++.| +=. --.+|+.++++. +|+|-+|.
T Consensus 204 ~t~eea~eA~~aGaD~I~ld~~-~~~~~k~av~~v~---~~ipi~A-sGG-It~eni~~~a~tGvD~IsVgs 269 (286)
T 1x1o_A 204 RSLEELEEALEAGADLILLDNF-PLEALREAVRRVG---GRVPLEA-SGN-MTLERAKAAAEAGVDYVSVGA 269 (286)
T ss_dssp SSHHHHHHHHHHTCSEEEEESC-CHHHHHHHHHHHT---TSSCEEE-ESS-CCHHHHHHHHHHTCSEEECTH
T ss_pred CCHHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhC---CCCeEEE-EcC-CCHHHHHHHHHcCCCEEEEcH
Confidence 3467778888999999999976 6666666655553 3555555 101 126799999988 99999863
No 316
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=36.67 E-value=1.9e+02 Score=32.90 Aligned_cols=101 Identities=17% Similarity=0.165 Sum_probs=71.6
Q ss_pred ChhhHHHhhhhhhcCCcEEEe-------------------cCCCCh--hHHHHHHHHHHhcCCCceEEEeecCcchhhh-
Q 008319 266 TDKDWEDIKFGVDNQVDFYAV-------------------SFVKDA--KVVHELKDYLKSCNADIHVIVKIESADSIPN- 323 (570)
Q Consensus 266 t~kD~~dI~~~~~~gvd~I~~-------------------SfV~sa--~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~N- 323 (570)
++.-++-|.||.++|.++|.+ .|+.-- -|+.++-+|-+++ .+.||.-.|+..++.|
T Consensus 370 te~~K~YIDFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~sK--GV~iilw~~t~~~~~n~ 447 (738)
T 2d73_A 370 TANVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARK--GIKMMMHHETSASVRNY 447 (738)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHHT--TCEEEEEEECTTBHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHhC--CCEEEEEEcCCCchhhH
Confidence 455578899999999999999 221111 2488999998875 5788999999875444
Q ss_pred ---HHHHHHh-----CCEEEEcCCCcccCCCC------CCHHHHHHHHHHHHHHcCCCEEE
Q 008319 324 ---LHSIISA-----SDGAMVARGDLGAELPI------EDVPLLQEDIIRRCRSMQKPVIV 370 (570)
Q Consensus 324 ---ldeIl~~-----sDgImIgrGDLg~eig~------~~v~~~qk~Ii~~c~~~gKPviv 370 (570)
+|+.++. +.||-++= +|-=++- ..+.....++++.|.+++.-|.+
T Consensus 448 e~~~d~~f~~~~~~Gv~GVKvdF--~g~~~~r~~~h~~Q~~v~~Y~~i~~~AA~~~LmVnf 506 (738)
T 2d73_A 448 ERHMDKAYQFMADNGYNSVKSGY--VGNIIPRGEHHYGQWMNNHYLYAVKKAADYKIMVNA 506 (738)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEC--CSSCBSTTCCTTSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEeCc--cccCcCCcccccchHHHHHHHHHHHHHHHcCcEEEc
Confidence 5555554 77998862 1111122 34677788999999999998885
No 317
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=36.65 E-value=1.3e+02 Score=30.33 Aligned_cols=59 Identities=19% Similarity=0.217 Sum_probs=39.8
Q ss_pred HHHcCCCEEE-EccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHHhh
Q 008319 361 CRSMQKPVIV-ATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (570)
Q Consensus 361 c~~~gKPviv-aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE 430 (570)
+.....|+++ | ....-+. .|+..+...|+|++++..--.....|.++++.|...+....
T Consensus 203 ~~~~~iPVivvA--------~GGI~t~---~dv~~~~~~GAdgVlVGsai~~a~dp~~~~~~l~~ai~~~~ 262 (297)
T 4adt_A 203 RKLKRLPVVNFA--------AGGIATP---ADAAMCMQLGMDGVFVGSGIFESENPQKMASSIVMAVSNFN 262 (297)
T ss_dssp HHHTSCSSEEEE--------ESCCCSH---HHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHHHTTT
T ss_pred HHhcCCCeEEEe--------cCCCCCH---HHHHHHHHcCCCEEEEhHHHHcCCCHHHHHHHHHHHHHhhC
Confidence 3345788873 3 3444344 45677788899999986443455689999998887765443
No 318
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=36.64 E-value=1.6e+02 Score=29.32 Aligned_cols=95 Identities=19% Similarity=0.203 Sum_probs=52.6
Q ss_pred HHHHHh-CCEEEEcCCCc--ccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHH-HhHHHHHHHhCc
Q 008319 325 HSIISA-SDGAMVARGDL--GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (570)
Q Consensus 325 deIl~~-sDgImIgrGDL--g~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~ 400 (570)
+-.++. +|||++. |=- +..+..++-..+.+..++.++ -..||+.- ....+-+| +.-.-.|-..|+
T Consensus 40 ~~li~~Gv~gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~-grvpViaG---------vg~~~t~~ai~la~~A~~~Ga 108 (301)
T 1xky_A 40 NYLIDNGTTAIVVG-GTTGESPTLTSEEKVALYRHVVSVVD-KRVPVIAG---------TGSNNTHASIDLTKKATEVGV 108 (301)
T ss_dssp HHHHHTTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEE---------CCCSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCceEEeC---------CCCCCHHHHHHHHHHHHhcCC
Confidence 334444 8999984 111 112222333333333443332 24788864 22333445 445556677899
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHHHhh
Q 008319 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (570)
Q Consensus 401 D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE 430 (570)
|++|+..=--...-+-+.++....|+..+.
T Consensus 109 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 138 (301)
T 1xky_A 109 DAVMLVAPYYNKPSQEGMYQHFKAIAESTP 138 (301)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHTCS
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999986433223345677888888887664
No 319
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii} PDB: 3vdh_A*
Probab=36.51 E-value=57 Score=33.46 Aligned_cols=58 Identities=14% Similarity=0.298 Sum_probs=36.2
Q ss_pred CCCCCCHHHHHHHHHhCCcEEEEecCCCC-------h-HHHHHHHHHHHHHHhhcCCCcEEEEeecCCC
Q 008319 108 GPSTSSREMIWKLAEEGMNVARLNMSHGD-------H-ASHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (570)
Q Consensus 108 GPs~~~~e~l~~li~~Gm~v~RiN~sHg~-------~-e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~Gp 168 (570)
|..-.+++.++.|.+.|+|++||-++... . +...+.++.+=+...+. -+.+++|+-.-
T Consensus 49 g~~~~t~~di~~ik~~G~N~vRipi~w~~~~~~~g~~d~~~l~~ld~vVd~a~~~---Gi~vIldlH~~ 114 (353)
T 3l55_A 49 GQPETTQDMMTFLMQNGFNAVRIPVTWYEHMDAEGNVDEAWMMRVKAIVEYAMNA---GLYAIVNVHHD 114 (353)
T ss_dssp SCCCCCHHHHHHHHHTTEEEEEECCCCGGGBCTTCCBCHHHHHHHHHHHHHHHHH---TCEEEEECCTT
T ss_pred CCCCCCHHHHHHHHHcCCCEEEEcccHHHhcCCCCCcCHHHHHHHHHHHHHHHHC---CCEEEEECCCC
Confidence 44445789999999999999999987432 1 22222333222222333 37788888754
No 320
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=36.24 E-value=1.4e+02 Score=31.18 Aligned_cols=65 Identities=18% Similarity=0.116 Sum_probs=44.5
Q ss_pred ChhhHHHhhhhhhc-CCcEEEecC-------CCChhHHHHHHHHHHhcCCCceEEEee-----------cCcchhhhHHH
Q 008319 266 TDKDWEDIKFGVDN-QVDFYAVSF-------VKDAKVVHELKDYLKSCNADIHVIVKI-----------ESADSIPNLHS 326 (570)
Q Consensus 266 t~kD~~dI~~~~~~-gvd~I~~Sf-------V~sa~dv~~vr~~l~~~~~~i~IiaKI-----------Et~~gv~Nlde 326 (570)
.+.|...|+.+.+. |+++|-++- +-+.+++.++++.+++.|-.+..+.-+ +..+.++++.+
T Consensus 29 g~~d~~~L~~i~q~~G~~gIe~~l~~~~~g~~w~~~~i~~lk~~l~~~GL~i~~i~s~~~~~~i~~~~~~r~~~ie~~k~ 108 (386)
T 3bdk_A 29 GKKDPVTLEEIKAIPGMQGIVTAVYDVPVGQAWPLENILELKKMVEEAGLEITVIESIPVHEDIKQGKPNRDALIENYKT 108 (386)
T ss_dssp CTTCSSCHHHHHTSTTCCEEEECCCSSCSSSCCCHHHHHHHHHHHHTTTCEEEEEECCCCCHHHHTTCTTHHHHHHHHHH
T ss_pred CCCCHHHHHHHHhcCCCCEEEeCCcccCCCCCCCHHHHHHHHHHHHHcCCEEEEEeccccccccccCcHHHHHHHHHHHH
Confidence 34566677888899 999997662 446689999999999887665544211 11346677777
Q ss_pred HHHh
Q 008319 327 IISA 330 (570)
Q Consensus 327 Il~~ 330 (570)
.++.
T Consensus 109 ~i~~ 112 (386)
T 3bdk_A 109 SIRN 112 (386)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6665
No 321
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=36.21 E-value=1.5e+02 Score=29.31 Aligned_cols=95 Identities=20% Similarity=0.163 Sum_probs=52.6
Q ss_pred HHHHHh-CCEEEEcCCCc--ccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHH-HhHHHHHHHhCc
Q 008319 325 HSIISA-SDGAMVARGDL--GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (570)
Q Consensus 325 deIl~~-sDgImIgrGDL--g~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~ 400 (570)
+-.++. +||+++. |=- +..+..++-..+.+..++.++ -..||+.- ....+-+| +.-.-.|-..|+
T Consensus 28 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaG---------vg~~~t~~ai~la~~A~~~Ga 96 (294)
T 2ehh_A 28 EFHVDNGTDAILVC-GTTGESPTLTFEEHEKVIEFAVKRAA-GRIKVIAG---------TGGNATHEAVHLTAHAKEVGA 96 (294)
T ss_dssp HHHHTTTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEE---------CCCSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHCCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEe---------cCCCCHHHHHHHHHHHHhcCC
Confidence 334444 8999984 111 112222333333333333332 24788764 23344455 444556777899
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHHHhh
Q 008319 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (570)
Q Consensus 401 D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE 430 (570)
|++|+..=--...-+-+.++....|+..+.
T Consensus 97 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 126 (294)
T 2ehh_A 97 DGALVVVPYYNKPTQRGLYEHFKTVAQEVD 126 (294)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999986432223335677889999987765
No 322
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=36.12 E-value=1.7e+02 Score=28.90 Aligned_cols=122 Identities=9% Similarity=0.061 Sum_probs=69.0
Q ss_pred HHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHHhhcCCCC
Q 008319 356 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPV 435 (570)
Q Consensus 356 ~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~~~~ 435 (570)
-+...|+..|.++.+.- |.......+...-..|++.+....+. .| -++++...+++.+-.. ++.
T Consensus 79 a~A~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~v~~~~~~~---~~-~~~~~~a~~l~~~~~~-~~~ 142 (308)
T 2egu_A 79 GLAMVAAAKGYKAVLVM-----------PDTMSLERRNLLRAYGAELVLTPGAQ---GM-RGAIAKAEELVREHGY-FMP 142 (308)
T ss_dssp HHHHHHHHHTCEEEEEE-----------ESCSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHHCC-BCC
T ss_pred HHHHHHHHcCCCEEEEE-----------CCCCCHHHHHHHHHcCCEEEEECCCC---CH-HHHHHHHHHHHHHCcC-CcC
Confidence 56778899999988741 11111223455667899988876432 12 4677777776655432 111
Q ss_pred CCCCCCcccCCCCChhHHHHHHHHHHHhhcC--C-cEEEEcCChHHHHHHHh----cCCCCeEEEEeCCHH
Q 008319 436 SITPPTQFSAHKSHMGDMFAFHSTTMANTLN--T-PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQER 499 (570)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~--a-~Iiv~T~sG~tA~~ls~----~RP~~pIiavt~~~~ 499 (570)
.+ |.+.. .+..-....+.++.++++ . .||+.+-+|.++.-+++ ..|...|+++.+...
T Consensus 143 ~~-~~n~~-----~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigve~~~~ 207 (308)
T 2egu_A 143 QQ-FKNEA-----NPEIHRLTTGKEIVEQMGDQLDAFVAGVGTGGTITGAGKVLREAYPNIKIYAVEPADS 207 (308)
T ss_dssp --------------------CHHHHHHHHHTTCCCEEEEEGGGTHHHHHHHHHHHHHCTTCEEEEEEECC-
T ss_pred Cc-CCChh-----HHHHHHHHHHHHHHHHcCCCCCEEEEeeCCchhHHHHHHHHHHhCCCCEEEEEEeCCC
Confidence 11 11100 010001112345555554 4 79999999999777664 469999999988654
No 323
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=35.98 E-value=1.2e+02 Score=30.17 Aligned_cols=25 Identities=32% Similarity=0.460 Sum_probs=17.9
Q ss_pred cCCCeeeeccCCC--ceeecCCCEEEE
Q 008319 165 TKGPEVRSGDVPQ--PIILKEGQEFNF 189 (570)
Q Consensus 165 l~GpkiR~G~~~~--~i~l~~G~~v~l 189 (570)
..||+.|+.-.+. .-.|++|++|.|
T Consensus 117 s~Gr~~~V~Vsp~Vd~e~LkPG~rVaL 143 (251)
T 3m9b_A 117 TSGRKMRLTCSPNIDAASLKKGQTVRL 143 (251)
T ss_dssp CSSSCCEECBCTTSCTTTSCSSCEEEE
T ss_pred eCCceEEEEeCCCCCHHHCCCCCEEEe
Confidence 4677777765542 247899999988
No 324
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=35.78 E-value=81 Score=29.47 Aligned_cols=86 Identities=14% Similarity=0.008 Sum_probs=48.1
Q ss_pred HHhhhhhhcCCcEEEecCCCC-----hhHHHHHHHHHHhcCCCceEEE--eecCcchhhhHHHHHHh-CCEEEEcCCCcc
Q 008319 271 EDIKFGVDNQVDFYAVSFVKD-----AKVVHELKDYLKSCNADIHVIV--KIESADSIPNLHSIISA-SDGAMVARGDLG 342 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~s-----a~dv~~vr~~l~~~~~~i~Iia--KIEt~~gv~NldeIl~~-sDgImIgrGDLg 342 (570)
+.++.+.+.|+|+|.+.-+.. .-+...+++..+.. ++++++ =|.+ .+|+.+.++. +||+++|++=+.
T Consensus 158 e~~~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~~--~~pvia~GGi~~---~~~~~~~~~~Ga~~v~vgsal~~ 232 (253)
T 1h5y_A 158 KWAKEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADSV--RIPVIASGGAGR---VEHFYEAAAAGADAVLAASLFHF 232 (253)
T ss_dssp HHHHHHHHHTCSEEEEEETTTTTTCSCCCHHHHHHHHHHC--SSCEEEESCCCS---HHHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHhCCCCEEEEecccCCCCcCcCCHHHHHHHHHhc--CCCEEEeCCCCC---HHHHHHHHHcCCcHHHHHHHHHc
Confidence 445667788999997743331 11333344333332 455555 3333 3566666666 999999975443
Q ss_pred cCCCCCCHHHHHHHHHHHHHHcCCCE
Q 008319 343 AELPIEDVPLLQEDIIRRCRSMQKPV 368 (570)
Q Consensus 343 ~eig~~~v~~~qk~Ii~~c~~~gKPv 368 (570)
...+ .+++.+..+++|.++
T Consensus 233 ~~~~-------~~~~~~~l~~~g~~~ 251 (253)
T 1h5y_A 233 RVLS-------IAQVKRYLKERGVEV 251 (253)
T ss_dssp TSSC-------HHHHHHHHHHTTCBC
T ss_pred CCCC-------HHHHHHHHHHcCCCC
Confidence 3222 234555566777664
No 325
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=35.53 E-value=1.4e+02 Score=30.87 Aligned_cols=96 Identities=19% Similarity=0.180 Sum_probs=51.1
Q ss_pred ChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEEcC-CCcccCCCCCCHHHHHHHHHHHHHHcCCCE
Q 008319 291 DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVAR-GDLGAELPIEDVPLLQEDIIRRCRSMQKPV 368 (570)
Q Consensus 291 sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgr-GDLg~eig~~~v~~~qk~Ii~~c~~~gKPv 368 (570)
+.+++..+++.. +.+++.|.= ...+......+. +|+|.|.- |-=....+...+ ....++.+... ...||
T Consensus 217 ~~~~i~~lr~~~-----~~PvivK~v--~~~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~-~~l~~v~~~v~-~~ipV 287 (368)
T 2nli_A 217 SPRDIEEIAGHS-----GLPVFVKGI--QHPEDADMAIKRGASGIWVSNHGARQLYEAPGSF-DTLPAIAERVN-KRVPI 287 (368)
T ss_dssp CHHHHHHHHHHS-----SSCEEEEEE--CSHHHHHHHHHTTCSEEEECCGGGTSCSSCCCHH-HHHHHHHHHHT-TSSCE
T ss_pred hHHHHHHHHHHc-----CCCEEEEcC--CCHHHHHHHHHcCCCEEEEcCCCcCCCCCCCChH-HHHHHHHHHhC-CCCeE
Confidence 455666666543 466777721 223333333444 89999841 100012222222 23333333321 25898
Q ss_pred EEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecc
Q 008319 369 IVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (570)
Q Consensus 369 ivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (570)
|.. ...-+ -.|+..++..|+|+||+..
T Consensus 288 ia~---------GGI~~---g~D~~kalalGAd~V~iGr 314 (368)
T 2nli_A 288 VFD---------SGVRR---GEHVAKALASGADVVALGR 314 (368)
T ss_dssp EEC---------SSCCS---HHHHHHHHHTTCSEEEECH
T ss_pred EEE---------CCCCC---HHHHHHHHHcCCCEEEECH
Confidence 863 33322 4578899999999999863
No 326
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=35.40 E-value=1.2e+02 Score=30.83 Aligned_cols=79 Identities=15% Similarity=0.289 Sum_probs=47.5
Q ss_pred CCCceEEEeecCc------chhhhHHHHHHh-CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhh
Q 008319 306 NADIHVIVKIESA------DSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESM 378 (570)
Q Consensus 306 ~~~i~IiaKIEt~------~gv~NldeIl~~-sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM 378 (570)
+.+..|+|+.|.. ++++......++ +|+||+- . ++. -+.+-+.|++..+|++. +|++-
T Consensus 157 ~~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~e-------~-~~~----~~~~~~i~~~~~~P~~~--n~~~~- 221 (305)
T 3ih1_A 157 APSLYIVARTDARGVEGLDEAIERANAYVKAGADAIFPE-------A-LQS----EEEFRLFNSKVNAPLLA--NMTEF- 221 (305)
T ss_dssp CTTSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEET-------T-CCS----HHHHHHHHHHSCSCBEE--ECCTT-
T ss_pred CCCeEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEEc-------C-CCC----HHHHHHHHHHcCCCEEE--eecCC-
Confidence 4567888888875 455555555555 8999982 1 122 23455566677889864 34432
Q ss_pred hcCCCcChHHHhHHHHHHHhCccEEEe
Q 008319 379 IDHPTPTRAEVSDIAIAVREGADAVML 405 (570)
Q Consensus 379 ~~~~~PtrAEv~Dv~nav~~G~D~vmL 405 (570)
-..|.++.+|. -..|+..+..
T Consensus 222 g~tp~~~~~eL------~~lGv~~v~~ 242 (305)
T 3ih1_A 222 GKTPYYSAEEF------ANMGFQMVIY 242 (305)
T ss_dssp SSSCCCCHHHH------HHTTCSEEEE
T ss_pred CCCCCCCHHHH------HHcCCCEEEE
Confidence 12345565554 4468877765
No 327
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=35.24 E-value=1.7e+02 Score=29.72 Aligned_cols=95 Identities=20% Similarity=0.083 Sum_probs=52.5
Q ss_pred HHHHHh-CCEEEEcCCCc--ccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHH-HhHHHHHHHhCc
Q 008319 325 HSIISA-SDGAMVARGDL--GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (570)
Q Consensus 325 deIl~~-sDgImIgrGDL--g~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~ 400 (570)
+..++. +|||++. |=- +..+..++-..+.+..++.++ -..|||.-| ...+-+| +.-.-.|-..|+
T Consensus 62 ~~li~~Gv~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~ve~~~-grvpViaGv---------g~~st~eai~la~~A~~~Ga 130 (332)
T 2r8w_A 62 ARLDAAEVDSVGIL-GSTGIYMYLTREERRRAIEAAATILR-GRRTLMAGI---------GALRTDEAVALAKDAEAAGA 130 (332)
T ss_dssp HHHHHHTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEEE---------CCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEec---------CCCCHHHHHHHHHHHHhcCC
Confidence 344444 8999984 111 112222333333333333332 247887642 2334445 444556677899
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHHHhh
Q 008319 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (570)
Q Consensus 401 D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE 430 (570)
|++|+..=--...-+-+.++....|+..+.
T Consensus 131 davlv~~P~Y~~~s~~~l~~~f~~VA~a~~ 160 (332)
T 2r8w_A 131 DALLLAPVSYTPLTQEEAYHHFAAVAGATA 160 (332)
T ss_dssp SEEEECCCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999996432223335677889999988765
No 328
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=35.18 E-value=72 Score=33.15 Aligned_cols=95 Identities=13% Similarity=0.157 Sum_probs=55.0
Q ss_pred HHhhhhhhcCCcEEEec-------CCCChhHHHHHHHHHHhcCCCceEEEeec---CcchhhhHHHHHHh-CCEEEEcCC
Q 008319 271 EDIKFGVDNQVDFYAVS-------FVKDAKVVHELKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S-------fV~sa~dv~~vr~~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDgImIgrG 339 (570)
+.+++-++.|+|++.+. .....|..+-++...+..+.+++||+-+= |.++++....-.+. +|++++-+-
T Consensus 84 ~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~P 163 (360)
T 4dpp_A 84 DLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 163 (360)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 44567789999998773 12223333334555566677899999773 55566555555555 899998654
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
...- .+.+.+...-+.|.+ + .|+++.
T Consensus 164 yY~k-~sq~gl~~hf~~IA~---a--~PiilY 189 (360)
T 4dpp_A 164 YYGK-TSIEGLIAHFQSVLH---M--GPTIIY 189 (360)
T ss_dssp CSSC-CCHHHHHHHHHTTGG---G--SCEEEE
T ss_pred CCCC-CCHHHHHHHHHHHHH---h--CCEEEE
Confidence 3321 121233333344433 2 598874
No 329
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=35.09 E-value=2.7e+02 Score=27.84 Aligned_cols=129 Identities=14% Similarity=0.128 Sum_probs=0.0
Q ss_pred CChhhHHHhhhhhhcCCcEEEecC-------------CCChhHHHHHHHHHHhcCCCceEEEeecC-------cchhhhH
Q 008319 265 ITDKDWEDIKFGVDNQVDFYAVSF-------------VKDAKVVHELKDYLKSCNADIHVIVKIES-------ADSIPNL 324 (570)
Q Consensus 265 lt~kD~~dI~~~~~~gvd~I~~Sf-------------V~sa~dv~~vr~~l~~~~~~i~IiaKIEt-------~~gv~Nl 324 (570)
+|-+|.---+.+-+.|+|.|.+.. --+-+++...-+.+.+.-....|++=++- .++++|.
T Consensus 39 ~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~na 118 (281)
T 1oy0_A 39 LTAYDYSTARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVVADLPFGSYEAGPTAALAAA 118 (281)
T ss_dssp EECCSHHHHHHHHTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEEEECCTTSSTTCHHHHHHHH
T ss_pred EeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEEEECCCCcccCCHHHHHHHH
Q ss_pred HHHHHh--CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEE-------EEccchhhhhcCCCcChHH--HhHHH
Q 008319 325 HSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVI-------VATNMLESMIDHPTPTRAE--VSDIA 393 (570)
Q Consensus 325 deIl~~--sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvi-------vaTqmLeSM~~~~~PtrAE--v~Dv~ 393 (570)
-.+++. +++|-+-=| ..+...|+++.++|.||+ -..+.+.......+..+++ +.|.-
T Consensus 119 ~rl~~eaGa~aVklEdg------------~e~~~~I~al~~agIpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~rA~ 186 (281)
T 1oy0_A 119 TRFLKDGGAHAVKLEGG------------ERVAEQIACLTAAGIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIADAI 186 (281)
T ss_dssp HHHHHTTCCSEEEEEBS------------GGGHHHHHHHHHHTCCEEEEEECCC--------------CHHHHHHHHHHH
T ss_pred HHHHHHhCCeEEEECCc------------HHHHHHHHHHHHCCCCEEeeecCCcceecccCCeEEEeCcHHHHHHHHHHH
Q ss_pred HHHHhCccEEEe
Q 008319 394 IAVREGADAVML 405 (570)
Q Consensus 394 nav~~G~D~vmL 405 (570)
.+...|+|+++|
T Consensus 187 a~~eAGA~~ivl 198 (281)
T 1oy0_A 187 AVAEAGAFAVVM 198 (281)
T ss_dssp HHHHHTCSEEEE
T ss_pred HHHHcCCcEEEE
No 330
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=34.72 E-value=1.9e+02 Score=28.86 Aligned_cols=95 Identities=16% Similarity=0.130 Sum_probs=52.3
Q ss_pred HHHHHh-CCEEEEcCCCcc--cCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHH-HhHHHHHHHhCc
Q 008319 325 HSIISA-SDGAMVARGDLG--AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (570)
Q Consensus 325 deIl~~-sDgImIgrGDLg--~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~ 400 (570)
+-.++. +|||++. |=-| ..+..++-..+.+..++.++ -..|||.- ....+-+| +.-.-.|-..|+
T Consensus 44 ~~li~~Gv~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaG---------vg~~st~~ai~la~~A~~~Ga 112 (304)
T 3cpr_A 44 AYLVDKGLDSLVLA-GTTGESPTTTAAEKLELLKAVREEVG-DRAKLIAG---------VGTNNTRTSVELAEAAASAGA 112 (304)
T ss_dssp HHHHHTTCCEEEES-STTTTTTTSCHHHHHHHHHHHHHHHT-TTSEEEEE---------CCCSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEec---------CCCCCHHHHHHHHHHHHhcCC
Confidence 344444 8999984 1111 11222333333333333332 24788863 23334445 455556777899
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHHHhh
Q 008319 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (570)
Q Consensus 401 D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE 430 (570)
|++|+..=--...-+-+.++....|+..+.
T Consensus 113 davlv~~P~y~~~~~~~l~~~f~~ia~a~~ 142 (304)
T 3cpr_A 113 DGLLVVTPYYSKPSQEGLLAHFGAIAAATE 142 (304)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999986432222235677888889987764
No 331
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=34.63 E-value=1.3e+02 Score=30.61 Aligned_cols=154 Identities=14% Similarity=0.153 Sum_probs=87.8
Q ss_pred CCCChhhHHHh-hhhh-hcCCcEEEecCCCChhHHHHHHHHHHhcC---CCceEEEeecCcchhhhHHHHHHh-------
Q 008319 263 PSITDKDWEDI-KFGV-DNQVDFYAVSFVKDAKVVHELKDYLKSCN---ADIHVIVKIESADSIPNLHSIISA------- 330 (570)
Q Consensus 263 p~lt~kD~~dI-~~~~-~~gvd~I~~SfV~sa~dv~~vr~~l~~~~---~~i~IiaKIEt~~gv~NldeIl~~------- 330 (570)
|..|+.|.+.+ +.|. +.++-.|+++ +..+..+++.|...+ .+++|.+=|=-|.|-...+.-+..
T Consensus 37 p~~T~e~I~~lc~eA~~~~~~aaVCV~----P~~V~~a~~~L~~~~~~~s~v~V~tVigFP~G~~~~e~K~~Ea~~Av~~ 112 (297)
T 4eiv_A 37 DGETNESVAAVCKIAAKDPAIVGVSVR----PAFVRFIRQELVKSAPEVAGIKVCAAVNFPEGTGTPDTVSLEAVGALKD 112 (297)
T ss_dssp TTCCHHHHHHHHHHHHSSSCCSEEEEC----GGGHHHHHHTGGGTCGGGGGSEEEEEESTTTCCCCHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHhhcCcEEEEEC----HHHHHHHHHHhcccCcCCCCCeEEEEecCCCCCCCHHHHHHHHHHHHHc
Confidence 56677776544 5677 6777777776 667888888887654 567888777666665554433322
Q ss_pred -CCEE--EEcCCCcccC--CCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHH-HhH-HHHHHHhCccEE
Q 008319 331 -SDGA--MVARGDLGAE--LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSD-IAIAVREGADAV 403 (570)
Q Consensus 331 -sDgI--mIgrGDLg~e--ig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAE-v~D-v~nav~~G~D~v 403 (570)
+|-| +|..|-|-.. =.++.+..-.+.+.++|...-..||+-|-.| +..| +.. .--++..|+|+|
T Consensus 113 GAdEIDmVinig~lk~~~~g~~~~V~~eI~~v~~a~~~~~lKVIlEt~~L---------t~~e~i~~A~~ia~~AGADFV 183 (297)
T 4eiv_A 113 GADEIECLIDWRRMNENVADGESRIRLLVSEVKKVVGPKTLKVVLSGGEL---------QGGDIISRAAVAALEGGADFL 183 (297)
T ss_dssp TCSEEEEECCTHHHHHCHHHHHHHHHHHHHHHHHHHTTSEEEEECCSSCC---------CCHHHHHHHHHHHHHHTCSEE
T ss_pred CCCEEEeeeeHHHHhcccCCcHHHHHHHHHHHHHHhcCCceEEEEecccC---------CcHHHHHHHHHHHHHhCCCEE
Confidence 3322 1222221100 0012333344456666643233456543333 3445 333 334577899998
Q ss_pred EecccccCCCCHHHHHHHHHHHHHHh
Q 008319 404 MLSGETAHGKFPLKAVKVMHTVALRT 429 (570)
Q Consensus 404 mLs~ETA~G~yP~eaV~~m~~I~~~a 429 (570)
=-|.-=..|.--++.|+.|.+.+++.
T Consensus 184 KTSTGf~~~gAT~edV~lM~~~v~~~ 209 (297)
T 4eiv_A 184 QTSSGLGATHATMFTVHLISIALREY 209 (297)
T ss_dssp ECCCSSSSCCCCHHHHHHHHHHHHHH
T ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 76643333445679999999999754
No 332
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=34.61 E-value=1.4e+02 Score=28.61 Aligned_cols=66 Identities=17% Similarity=0.251 Sum_probs=46.0
Q ss_pred HHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHhCCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 295 VHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 295 v~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
+..+++.+.+.+.++.+.+.-+... -+|++++++-.|.|+.+-.+ +.....+.+.|++.|+|++.+
T Consensus 87 a~~~~~~l~~~np~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~----------~~~~~~l~~~~~~~~~p~i~~ 152 (249)
T 1jw9_B 87 VESARDALTRINPHIAITPVNALLD-DAELAALIAEHDLVLDCTDN----------VAVRNQLNAGCFAAKVPLVSG 152 (249)
T ss_dssp HHHHHHHHHHHCTTSEEEEECSCCC-HHHHHHHHHTSSEEEECCSS----------HHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHCCCcEEEEEeccCC-HhHHHHHHhCCCEEEEeCCC----------HHHHHHHHHHHHHcCCCEEEe
Confidence 3445666777777776655433333 25788888889999887322 246678888999999999875
No 333
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=34.59 E-value=70 Score=31.71 Aligned_cols=64 Identities=14% Similarity=0.207 Sum_probs=47.1
Q ss_pred HHHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEE--eecCcchhhhHHHHHHh-CCEEEEcC
Q 008319 270 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIV--KIESADSIPNLHSIISA-SDGAMVAR 338 (570)
Q Consensus 270 ~~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~Iia--KIEt~~gv~NldeIl~~-sDgImIgr 338 (570)
.+.++.+++.|+|+|.+.-. +++++.++.+.+.....+++|.| -| -.+|+.++++. +|+|-+|.
T Consensus 192 lee~~~A~~aGaD~I~ld~~-~~~~l~~~v~~l~~~~~~~~i~AsGGI----~~~ni~~~~~aGaD~i~vGs 258 (273)
T 2b7n_A 192 FEEAKNAMNAGADIVMCDNL-SVLETKEIAAYRDAHYPFVLLEASGNI----SLESINAYAKSGVDAISVGA 258 (273)
T ss_dssp HHHHHHHHHHTCSEEEEETC-CHHHHHHHHHHHHHHCTTCEEEEESSC----CTTTHHHHHTTTCSEEECTH
T ss_pred HHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCcEEEEECCC----CHHHHHHHHHcCCcEEEEcH
Confidence 35567778899999999864 68888887777765444565554 23 34688999888 99998874
No 334
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=34.57 E-value=2.2e+02 Score=28.95 Aligned_cols=121 Identities=17% Similarity=0.241 Sum_probs=59.9
Q ss_pred HHhhhhhhcCCcEEEecC----------------CCChhHHHHHHHHHHhcCCCceEEEeecC----cchhhhHHHHHH-
Q 008319 271 EDIKFGVDNQVDFYAVSF----------------VKDAKVVHELKDYLKSCNADIHVIVKIES----ADSIPNLHSIIS- 329 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~Sf----------------V~sa~dv~~vr~~l~~~~~~i~IiaKIEt----~~gv~NldeIl~- 329 (570)
+..+.+.+.|+|+|-+.+ .++++.+.++-+.+.+. .+++|..||-. ....++..++++
T Consensus 74 ~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~-v~~PV~vKiR~g~~~~~~~~~~~~~a~~ 152 (350)
T 3b0p_A 74 EAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEA-VRVPVTVKMRLGLEGKETYRGLAQSVEA 152 (350)
T ss_dssp HHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHH-CSSCEEEEEESCBTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHH-hCCceEEEEecCcCccccHHHHHHHHHH
Confidence 444566788999987764 23344444433334332 15778888741 111223333332
Q ss_pred ---h-CCEEEEcCCCc--ccCCCCC--CHHHHHHHHHHHHH-Hc-CCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhC
Q 008319 330 ---A-SDGAMVARGDL--GAELPIE--DVPLLQEDIIRRCR-SM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREG 399 (570)
Q Consensus 330 ---~-sDgImIgrGDL--g~eig~~--~v~~~qk~Ii~~c~-~~-gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G 399 (570)
. +|+|.|-.+.- +.. |.. ..+...-..+...+ .. +.|||.. ...-|.. |+..++. |
T Consensus 153 l~~aG~d~I~V~~r~~~~g~~-g~~~~~~~~~~~~~i~~ik~~~~~iPVian---------GgI~s~e---da~~~l~-G 218 (350)
T 3b0p_A 153 MAEAGVKVFVVHARSALLALS-TKANREIPPLRHDWVHRLKGDFPQLTFVTN---------GGIRSLE---EALFHLK-R 218 (350)
T ss_dssp HHHTTCCEEEEECSCBC-----------CCCCCHHHHHHHHHHCTTSEEEEE---------SSCCSHH---HHHHHHT-T
T ss_pred HHHcCCCEEEEecCchhcccC-cccccCCCcccHHHHHHHHHhCCCCeEEEE---------CCcCCHH---HHHHHHh-C
Confidence 3 89998864321 111 100 00001112333333 34 7898864 3444443 3444555 9
Q ss_pred ccEEEec
Q 008319 400 ADAVMLS 406 (570)
Q Consensus 400 ~D~vmLs 406 (570)
+|+||+.
T Consensus 219 aD~V~iG 225 (350)
T 3b0p_A 219 VDGVMLG 225 (350)
T ss_dssp SSEEEEC
T ss_pred CCEEEEC
Confidence 9999985
No 335
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=34.56 E-value=2.4e+02 Score=25.91 Aligned_cols=87 Identities=9% Similarity=0.156 Sum_probs=51.5
Q ss_pred HHHhhhhhhcCCcEEE-----ecCCCC----hhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEEcCC
Q 008319 270 WEDIKFGVDNQVDFYA-----VSFVKD----AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARG 339 (570)
Q Consensus 270 ~~dI~~~~~~gvd~I~-----~SfV~s----a~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrG 339 (570)
.++++.+.+.|+|++. -+|++. .+.++++++. .+..+.+-.++.+++- .++...+. +|++.+.-+
T Consensus 19 ~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~---~~~~~~v~l~v~d~~~--~i~~~~~~gad~v~vh~~ 93 (220)
T 2fli_A 19 ASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKH---SKLVFDCHLMVVDPER--YVEAFAQAGADIMTIHTE 93 (220)
T ss_dssp HHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTT---CCSEEEEEEESSSGGG--GHHHHHHHTCSEEEEEGG
T ss_pred HHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHh---CCCCEEEEEeecCHHH--HHHHHHHcCCCEEEEccC
Confidence 3566777788999742 245555 4445454432 2334556667776532 45555555 899988521
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
. + +.. ...++.+++.|+.++++
T Consensus 94 ~-----~-~~~----~~~~~~~~~~g~~i~~~ 115 (220)
T 2fli_A 94 S-----T-RHI----HGALQKIKAAGMKAGVV 115 (220)
T ss_dssp G-----C-SCH----HHHHHHHHHTTSEEEEE
T ss_pred c-----c-ccH----HHHHHHHHHcCCcEEEE
Confidence 1 1 222 34566667789888886
No 336
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=34.23 E-value=1.6e+02 Score=29.09 Aligned_cols=97 Identities=19% Similarity=0.054 Sum_probs=54.9
Q ss_pred HHHHHH-h-CCEEEEcCCCcc--cCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHH-HhHHHHHHHh
Q 008319 324 LHSIIS-A-SDGAMVARGDLG--AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVRE 398 (570)
Q Consensus 324 ldeIl~-~-sDgImIgrGDLg--~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~ 398 (570)
++-.++ . +|||++. |=-| ..+..++-..+.+..++.++ -..|||.- ....+-.| +.-.-.|-..
T Consensus 30 v~~li~~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaG---------vg~~~t~~ai~la~~a~~~ 98 (293)
T 1f6k_A 30 IRHNIDKMKVDGLYVG-GSTGENFMLSTEEKKEIFRIAKDEAK-DQIALIAQ---------VGSVNLKEAVELGKYATEL 98 (293)
T ss_dssp HHHHHHTSCCSEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEE---------CCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHhhCCCcEEEeC-ccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEe---------cCCCCHHHHHHHHHHHHhc
Confidence 355566 4 8999984 1111 12222333333334443332 24788864 23333445 5555567778
Q ss_pred CccEEEecccccCCCCHHHHHHHHHHHHHHhhc
Q 008319 399 GADAVMLSGETAHGKFPLKAVKVMHTVALRTES 431 (570)
Q Consensus 399 G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~ 431 (570)
|+|++|+..=--...-+-+.++....|+..+.-
T Consensus 99 Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~l 131 (293)
T 1f6k_A 99 GYDCLSAVTPFYYKFSFPEIKHYYDTIIAETGS 131 (293)
T ss_dssp TCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCC
T ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 999999864332233367788899999887753
No 337
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=34.13 E-value=2.7e+02 Score=28.59 Aligned_cols=116 Identities=12% Similarity=0.015 Sum_probs=60.8
Q ss_pred hcCCcEEEecCC-----------CChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHH------hCCEEEEc---
Q 008319 278 DNQVDFYAVSFV-----------KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS------ASDGAMVA--- 337 (570)
Q Consensus 278 ~~gvd~I~~SfV-----------~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~------~sDgImIg--- 337 (570)
+.|+|+|-+.+- .+++.+.++-+.+.+. .+++|++||=--.-.+++.++++ -+|+|.+-
T Consensus 153 ~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~-~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~ 231 (354)
T 4ef8_A 153 TEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEV-YPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSI 231 (354)
T ss_dssp HHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHH-CCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCE
T ss_pred hcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHh-hCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEeccc
Confidence 357898876542 2344444433334332 35889999953323344555554 26777641
Q ss_pred -CC---Cc---------ccCC-CC--CCHHHHHHHHHHHHHHc--CCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhC
Q 008319 338 -RG---DL---------GAEL-PI--EDVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREG 399 (570)
Q Consensus 338 -rG---DL---------g~ei-g~--~~v~~~qk~Ii~~c~~~--gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G 399 (570)
+| |+ .... |+ +.+..+--+++...+++ ..|+|.. ...-+ ..|+..++..|
T Consensus 232 ~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ipII~~---------GGI~s---~~da~~~l~aG 299 (354)
T 4ef8_A 232 GNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFGC---------GGVYT---GEDAFLHVLAG 299 (354)
T ss_dssp EEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEEE---------SCCCS---HHHHHHHHHHT
T ss_pred CcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCCEEEE---------CCcCC---HHHHHHHHHcC
Confidence 10 10 0000 01 12322223444444443 4788753 33333 34778888999
Q ss_pred ccEEEec
Q 008319 400 ADAVMLS 406 (570)
Q Consensus 400 ~D~vmLs 406 (570)
+|+||+.
T Consensus 300 Ad~V~vg 306 (354)
T 4ef8_A 300 ASMVQVG 306 (354)
T ss_dssp EEEEEEC
T ss_pred CCEEEEh
Confidence 9999985
No 338
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=34.08 E-value=1.9e+02 Score=28.56 Aligned_cols=95 Identities=19% Similarity=0.141 Sum_probs=52.2
Q ss_pred HHHHHh-CCEEEEcCCCc--ccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHH-HhHHHHHHHhCc
Q 008319 325 HSIISA-SDGAMVARGDL--GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (570)
Q Consensus 325 deIl~~-sDgImIgrGDL--g~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~ 400 (570)
+-.++. +||+++. |=- +..+..++-..+.+..++.++ -..||+.- ....+-.| +.-.-.|-..|+
T Consensus 28 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaG---------vg~~~t~~ai~la~~a~~~Ga 96 (289)
T 2yxg_A 28 NFLIENGVSGIVAV-GTTGESPTLSHEEHKKVIEKVVDVVN-GRVQVIAG---------AGSNCTEEAIELSVFAEDVGA 96 (289)
T ss_dssp HHHHHTTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEE---------CCCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHCCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEe---------CCCCCHHHHHHHHHHHHhcCC
Confidence 444444 8999984 111 111222333333333333332 24788763 23334455 444556777899
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHHHhh
Q 008319 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (570)
Q Consensus 401 D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE 430 (570)
|++|+..=--...-+-+.++....|+..+.
T Consensus 97 davlv~~P~y~~~s~~~l~~~f~~ia~a~~ 126 (289)
T 2yxg_A 97 DAVLSITPYYNKPTQEGLRKHFGKVAESIN 126 (289)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999986432223335677888899987764
No 339
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=33.67 E-value=2.2e+02 Score=28.17 Aligned_cols=96 Identities=20% Similarity=0.226 Sum_probs=54.1
Q ss_pred HHHHHh-CCEEEEcCCCcc--cCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHH-HhHHHHHHHhCc
Q 008319 325 HSIISA-SDGAMVARGDLG--AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (570)
Q Consensus 325 deIl~~-sDgImIgrGDLg--~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~ 400 (570)
+..++. +||+++. |=-| ..+..++-..+.+..++.++ -..|||.- ....+-.| +.-.-.|-..|+
T Consensus 30 ~~li~~Gv~gl~v~-GttGE~~~Lt~~Er~~v~~~~~~~~~-grvpviaG---------vg~~~t~~ai~la~~a~~~Ga 98 (292)
T 3daq_A 30 NFLLENNAQAIIVN-GTTAESPTLTTDEKELILKTVIDLVD-KRVPVIAG---------TGTNDTEKSIQASIQAKALGA 98 (292)
T ss_dssp HHHHHTTCCEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEE---------CCCSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEEC-ccccccccCCHHHHHHHHHHHHHHhC-CCCcEEEe---------CCcccHHHHHHHHHHHHHcCC
Confidence 444444 8999984 1111 11222232333333333332 24688863 33334445 555566777899
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHHHhhc
Q 008319 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTES 431 (570)
Q Consensus 401 D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~ 431 (570)
|++|+..=--...-+-+.++....|+..+.-
T Consensus 99 davlv~~P~y~~~~~~~l~~~f~~ia~a~~l 129 (292)
T 3daq_A 99 DAIMLITPYYNKTNQRGLVKHFEAIADAVKL 129 (292)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHHCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 9999874332333457789999999988853
No 340
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=33.64 E-value=46 Score=32.66 Aligned_cols=47 Identities=15% Similarity=0.227 Sum_probs=35.7
Q ss_pred hhhhHHHHHHhCCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 320 SIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 320 gv~NldeIl~~sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
.++.+.++++.+|.+.|++|=+ -++.....+.+++.+++.++|+++=
T Consensus 46 ~~~e~~~~~~~~dalvi~~G~~-----~~~~~~~~~~~~~~a~~~~~pvVlD 92 (265)
T 1v8a_A 46 AEEELEEMIRLADAVVINIGTL-----DSGWRRSMVKATEIANELGKPIVLD 92 (265)
T ss_dssp CTTTHHHHHHHCSEEEEECTTC-----CHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CHHHHHHHHHHCCEEEEEECCC-----CHHHHHHHHHHHHHHHHcCCcEEEc
Confidence 4667888888999999987643 2344456677888899999999874
No 341
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=33.62 E-value=1.2e+02 Score=30.30 Aligned_cols=66 Identities=12% Similarity=0.197 Sum_probs=47.6
Q ss_pred HHHHHHHHhcCCCceEEEeecCcchhhhHHHHHH-----------hCCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHc
Q 008319 296 HELKDYLKSCNADIHVIVKIESADSIPNLHSIIS-----------ASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSM 364 (570)
Q Consensus 296 ~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~-----------~sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~ 364 (570)
..+++.|.+.|.++.|.+--+.....+|+++++. -.|.|+-+- .. +.....+-+.|.+.
T Consensus 92 ~aa~~~L~~iNP~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~---------Dn-~~~R~~in~~c~~~ 161 (292)
T 3h8v_A 92 QAAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV---------DN-FEARMTINTACNEL 161 (292)
T ss_dssp HHHHHHHHHHCTTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC---------SS-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECC---------cc-hhhhhHHHHHHHHh
Confidence 4466778888999888887777666678888763 467776442 22 34567788999999
Q ss_pred CCCEEEE
Q 008319 365 QKPVIVA 371 (570)
Q Consensus 365 gKPviva 371 (570)
++|.+.+
T Consensus 162 ~~Pli~~ 168 (292)
T 3h8v_A 162 GQTWMES 168 (292)
T ss_dssp TCCEEEE
T ss_pred CCCEEEe
Confidence 9998754
No 342
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=33.44 E-value=50 Score=32.85 Aligned_cols=52 Identities=19% Similarity=0.228 Sum_probs=41.2
Q ss_pred HHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCCcEEEEeecCCCee
Q 008319 116 MIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEV 170 (570)
Q Consensus 116 ~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~Gpki 170 (570)
..++|+++|+++.=+|+--...++..++...++.+.+..+ +.|.+|+.=|++
T Consensus 39 ~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~~---~pisIDT~~~~v 90 (271)
T 2yci_X 39 WARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVVD---LPCCLDSTNPDA 90 (271)
T ss_dssp HHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHCC---CCEEEECSCHHH
T ss_pred HHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhCC---CeEEEeCCCHHH
Confidence 3578999999999999977777888888888888776543 567889775544
No 343
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=33.32 E-value=3.6e+02 Score=26.54 Aligned_cols=95 Identities=13% Similarity=-0.012 Sum_probs=53.7
Q ss_pred HHhhhhhhcCCcEEEec------CCCChhHHHHHHH-HHHhcCCCceEEEeec---CcchhhhHHHHHHh-CCEEEEcCC
Q 008319 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHELKD-YLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S------fV~sa~dv~~vr~-~l~~~~~~i~IiaKIE---t~~gv~NldeIl~~-sDgImIgrG 339 (570)
+.++|-++.|+|++.+. +.-+.++-.++-+ ..+..+. ||+-+= |.++++.....-+. +|++++-+-
T Consensus 24 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g---viaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 100 (293)
T 1w3i_A 24 IHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK---IIFQVGGLNLDDAIRLAKLSKDFDIVGIASYAP 100 (293)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC---EEEECCCSCHHHHHHHHHHGGGSCCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC---EEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 45567789999998763 2233333333333 3333333 888773 45666665555554 899998654
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 340 DLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
.+.-. +.-..+.+..-..+.+.+.|+++.
T Consensus 101 ~y~~~---~s~~~l~~~f~~va~a~~lPiilY 129 (293)
T 1w3i_A 101 YYYPR---MSEKHLVKYFKTLCEVSPHPVYLY 129 (293)
T ss_dssp CSCSS---CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCCC---CCHHHHHHHHHHHHhhCCCCEEEE
Confidence 43210 122233333334456678999975
No 344
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=33.30 E-value=3.8e+02 Score=26.77 Aligned_cols=146 Identities=14% Similarity=0.066 Sum_probs=75.0
Q ss_pred CcccccCCCccCCCCCChhhHHHhhhhhhcCCc-EEEecCCCChhHHHHHHHHHHhcCCCceEEEe--ecCcchhhhHHH
Q 008319 250 RRHLNVRGKSANLPSITDKDWEDIKFGVDNQVD-FYAVSFVKDAKVVHELKDYLKSCNADIHVIVK--IESADSIPNLHS 326 (570)
Q Consensus 250 ~KgIn~p~~~~~lp~lt~kD~~dI~~~~~~gvd-~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaK--IEt~~gv~Nlde 326 (570)
..++..|=..-++..++ +.+....+...|.- ++...++ +++.+.+.-+.+.+.- +..+.+. +-++.--+.++.
T Consensus 22 ~l~~~~Pii~apM~gvs--~~~la~av~~aGglG~i~~~~~-~~~~l~~~i~~i~~~~-~~p~gVnl~~~~~~~~~~~~~ 97 (326)
T 3bo9_A 22 LLEIEHPILMGGMAWAG--TPTLAAAVSEAGGLGIIGSGAM-KPDDLRKAISELRQKT-DKPFGVNIILVSPWADDLVKV 97 (326)
T ss_dssp HHTCSSSEEECCCTTTS--CHHHHHHHHHTTSBEEEECTTC-CHHHHHHHHHHHHTTC-SSCEEEEEETTSTTHHHHHHH
T ss_pred hcCCCCCEEECCCCCCC--CHHHHHHHHhCCCcEEeCCCCC-CHHHHHHHHHHHHHhc-CCCEEEEEeccCCCHHHHHHH
Confidence 33444553333444444 34444555566654 4444443 5666544333343322 1222222 223333334444
Q ss_pred HHHh-CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEe
Q 008319 327 IISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 405 (570)
Q Consensus 327 Il~~-sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL 405 (570)
+++. +|.|.++-|+ | ..+++.+++.|.+++... .+. .+...+...|+|++.+
T Consensus 98 ~~~~g~d~V~l~~g~-----p--------~~~~~~l~~~g~~v~~~v-----------~s~---~~a~~a~~~GaD~i~v 150 (326)
T 3bo9_A 98 CIEEKVPVVTFGAGN-----P--------TKYIRELKENGTKVIPVV-----------ASD---SLARMVERAGADAVIA 150 (326)
T ss_dssp HHHTTCSEEEEESSC-----C--------HHHHHHHHHTTCEEEEEE-----------SSH---HHHHHHHHTTCSCEEE
T ss_pred HHHCCCCEEEECCCC-----c--------HHHHHHHHHcCCcEEEEc-----------CCH---HHHHHHHHcCCCEEEE
Confidence 4444 8999987542 2 245677788899988631 222 2344677889999999
Q ss_pred ccccc---CCCCHHHHHHHHHHHHHH
Q 008319 406 SGETA---HGKFPLKAVKVMHTVALR 428 (570)
Q Consensus 406 s~ETA---~G~yP~eaV~~m~~I~~~ 428 (570)
++=.+ .|.. -....+..+...
T Consensus 151 ~g~~~GG~~G~~--~~~~ll~~i~~~ 174 (326)
T 3bo9_A 151 EGMESGGHIGEV--TTFVLVNKVSRS 174 (326)
T ss_dssp ECTTSSEECCSS--CHHHHHHHHHHH
T ss_pred ECCCCCccCCCc--cHHHHHHHHHHH
Confidence 76333 2322 244555555543
No 345
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=33.21 E-value=61 Score=33.14 Aligned_cols=56 Identities=7% Similarity=0.021 Sum_probs=40.7
Q ss_pred CceEEEeecCcchhhhHHHHHHh--CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 308 DIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 308 ~i~IiaKIEt~~gv~NldeIl~~--sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
.++|++ =|+....+.+.++++. +|+|++.++-+|- + .--.+++..|+++|.++.+-
T Consensus 242 ~iPI~~-dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GG------i-~~~~~i~~~A~~~gi~~~~h 299 (371)
T 2ovl_A 242 GHTIAG-GENLHTLYDFHNAVRAGSLTLPEPDVSNIGG------Y-TTFRKVAALAEANNMLLTSH 299 (371)
T ss_dssp CSCEEE-CTTCCSHHHHHHHHHHTCCSEECCCTTTTTS------H-HHHHHHHHHHHHTTCCEEEC
T ss_pred CCCEEe-CCCCCCHHHHHHHHHcCCCCEEeeCccccCC------H-HHHHHHHHHHHHcCCeEccc
Confidence 355544 5777777888888776 8999997655542 2 23357899999999998873
No 346
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=33.10 E-value=85 Score=30.04 Aligned_cols=98 Identities=12% Similarity=-0.134 Sum_probs=54.0
Q ss_pred HHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEee------cCcchhhhHHHHHHh-----CCEEEEcC-
Q 008319 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI------ESADSIPNLHSIISA-----SDGAMVAR- 338 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKI------Et~~gv~NldeIl~~-----sDgImIgr- 338 (570)
+.++.+.+.|+|+|-+...- . ++.++++.+++.|-.+..+.-- ...++++.+...++. ++.+.+.+
T Consensus 35 ~~l~~~~~~G~~~vEl~~~~-~-~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~~ 112 (301)
T 3cny_A 35 QLLSDIVVAGFQGTEVGGFF-P-GPEKLNYELKLRNLEIAGQWFSSYIIRDGIEKASEAFEKHCQYLKAINAPVAVVSEQ 112 (301)
T ss_dssp HHHHHHHHHTCCEECCCTTC-C-CHHHHHHHHHHTTCEECEEEEEECHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHhCCCEEEecCCC-C-CHHHHHHHHHHCCCeEEEEeccCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEecCC
Confidence 45677788999998776322 2 7888999998877654433100 011234444444443 55666654
Q ss_pred -----CCcccCCC------C----CCHHHHHHHHHHHHHHcCCCEEE
Q 008319 339 -----GDLGAELP------I----EDVPLLQEDIIRRCRSMQKPVIV 370 (570)
Q Consensus 339 -----GDLg~eig------~----~~v~~~qk~Ii~~c~~~gKPviv 370 (570)
|.....++ . +.+....+++...|.++|..+.+
T Consensus 113 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~l 159 (301)
T 3cny_A 113 TYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAY 159 (301)
T ss_dssp TTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 22211111 1 12344445677777777766554
No 347
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=33.03 E-value=1e+02 Score=31.62 Aligned_cols=47 Identities=9% Similarity=0.254 Sum_probs=35.8
Q ss_pred HHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCCcEEEEeecC
Q 008319 116 MIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTK 166 (570)
Q Consensus 116 ~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~ 166 (570)
..+++.++|.+.+.+...|++.+.-.+.++.+|++. + ..+.|++|..
T Consensus 146 ~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~a~---G-~d~~l~vDan 192 (382)
T 2gdq_A 146 NVEAQLKKGFEQIKVKIGGTSFKEDVRHINALQHTA---G-SSITMILDAN 192 (382)
T ss_dssp HHHHHHTTTCCEEEEECSSSCHHHHHHHHHHHHHHH---C-TTSEEEEECT
T ss_pred HHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhh---C-CCCEEEEECC
Confidence 356678899999999999988877777888777654 4 4466777753
No 348
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=33.00 E-value=90 Score=31.92 Aligned_cols=60 Identities=20% Similarity=0.072 Sum_probs=41.6
Q ss_pred CceEEEeecCcch-hhhHHHHHHh--CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhh
Q 008319 308 DIHVIVKIESADS-IPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLES 377 (570)
Q Consensus 308 ~i~IiaKIEt~~g-v~NldeIl~~--sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeS 377 (570)
.++|++ =|+... .+.+.++++. +|+|.+-++-.| | + .--.+|+..|+++|.++.+- ++||
T Consensus 251 ~iPIa~-dE~~~~~~~~~~~~i~~~~~d~v~ik~~~~G---G---i-t~~~~i~~~A~~~g~~~~~~--~~~~ 313 (382)
T 1rvk_A 251 DIPVVG-PESAAGKHWHRAEWIKAGACDILRTGVNDVG---G---I-TPALKTMHLAEAFGMECEVH--GNTA 313 (382)
T ss_dssp SSCEEE-CSSCSSHHHHHHHHHHTTCCSEEEECHHHHT---S---H-HHHHHHHHHHHHTTCCEEEC--CCSH
T ss_pred CCCEEE-eCCccCcHHHHHHHHHcCCCCEEeeCchhcC---C---H-HHHHHHHHHHHHcCCeEeec--CCCC
Confidence 455544 677777 7788888876 899999543332 1 1 22357999999999999874 4444
No 349
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=32.90 E-value=1.7e+02 Score=28.19 Aligned_cols=66 Identities=17% Similarity=0.254 Sum_probs=46.8
Q ss_pred HHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHhCCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 295 VHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 295 v~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
+..+++.+.+.+.++.+.+.-+... -+|++++++-.|.|+-+-.+ +.....+-+.|++.++|++.+
T Consensus 84 a~~~~~~l~~~np~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~----------~~~r~~l~~~~~~~~~p~i~~ 149 (251)
T 1zud_1 84 SQVSQQRLTQLNPDIQLTALQQRLT-GEALKDAVARADVVLDCTDN----------MATRQEINAACVALNTPLITA 149 (251)
T ss_dssp HHHHHHHHHHHCTTSEEEEECSCCC-HHHHHHHHHHCSEEEECCSS----------HHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHCCCCEEEEEeccCC-HHHHHHHHhcCCEEEECCCC----------HHHHHHHHHHHHHhCCCEEEE
Confidence 3446677777788877766444332 26888999889998876322 235678888999999998875
No 350
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=32.77 E-value=2.2e+02 Score=28.05 Aligned_cols=95 Identities=20% Similarity=0.233 Sum_probs=53.6
Q ss_pred HHHHHh-CCEEEEcCCCcc--cCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHH-HhHHHHHHHhCc
Q 008319 325 HSIISA-SDGAMVARGDLG--AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (570)
Q Consensus 325 deIl~~-sDgImIgrGDLg--~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~ 400 (570)
+-.++. +||+++. |=-| ..+..++-..+.+..++.++ -..|||.- ....+-.| +.-.-.|-..|+
T Consensus 29 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaG---------vg~~~t~~ai~la~~a~~~Ga 97 (291)
T 3tak_A 29 EWHIEQGTNSIVAV-GTTGEASTLSMEEHTQVIKEIIRVAN-KRIPIIAG---------TGANSTREAIELTKAAKDLGA 97 (291)
T ss_dssp HHHHHHTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEE---------CCCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHCCCCEEEEC-ccccccccCCHHHHHHHHHHHHHHhC-CCCeEEEe---------CCCCCHHHHHHHHHHHHhcCC
Confidence 333444 8999884 1111 12222333333333343332 24688864 23334445 555567778899
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHHHhh
Q 008319 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (570)
Q Consensus 401 D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE 430 (570)
|++|+..=--...-+-+.++....|+..+.
T Consensus 98 davlv~~P~y~~~~~~~l~~~f~~ia~a~~ 127 (291)
T 3tak_A 98 DAALLVTPYYNKPTQEGLYQHYKAIAEAVE 127 (291)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999986432223335678899999988875
No 351
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=32.59 E-value=3.9e+02 Score=26.67 Aligned_cols=86 Identities=12% Similarity=0.032 Sum_probs=53.5
Q ss_pred CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHH-cCCC-EEEEccchhhhhcCCCcChHH-HhHHHHHHHhCccEEEecc
Q 008319 331 SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRS-MQKP-VIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSG 407 (570)
Q Consensus 331 sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~-~gKP-vivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~ 407 (570)
+|.+=+.++-.+ .... ...+++++.... .+.| |+++ ... +..+ ...+..++..|++++..-.
T Consensus 191 aD~iKv~~~~~~----~g~~-~~~~~vv~~~~~~~~~P~Vv~a---------GG~-~~~~~~~~~~~a~~aGa~Gv~vGR 255 (304)
T 1to3_A 191 ADLYKVEMPLYG----KGAR-SDLLTASQRLNGHINMPWVILS---------SGV-DEKLFPRAVRVAMEAGASGFLAGR 255 (304)
T ss_dssp CSEEEECCGGGG----CSCH-HHHHHHHHHHHHTCCSCEEECC---------TTS-CTTTHHHHHHHHHHTTCCEEEESH
T ss_pred CCEEEeCCCcCC----CCCH-HHHHHHHHhccccCCCCeEEEe---------cCC-CHHHHHHHHHHHHHcCCeEEEEeh
Confidence 787777763111 1111 223334443222 5889 6654 222 2222 3456777888999999877
Q ss_pred cccCC----CCHHHHH--------HHHHHHHHHhhc
Q 008319 408 ETAHG----KFPLKAV--------KVMHTVALRTES 431 (570)
Q Consensus 408 ETA~G----~yP~eaV--------~~m~~I~~~aE~ 431 (570)
-+..- ..|.+++ +.|+.++.+...
T Consensus 256 aI~q~~~~~~dp~~~~~~~~~~~~~~l~~iv~~~~~ 291 (304)
T 1to3_A 256 AVWSSVIGLPDTELMLRDVSAPKLQRLGEIVDEMMG 291 (304)
T ss_dssp HHHGGGTTCSCHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred HHhCccccCCCHHHHHHhhchHHHHHHHHHHhcCCC
Confidence 76666 8999999 999999887654
No 352
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=32.46 E-value=5.2e+02 Score=28.14 Aligned_cols=152 Identities=11% Similarity=-0.025 Sum_probs=90.3
Q ss_pred CCChhhHHHhhh-hhhcCCcEEEecC----CC-----ChhHHHHHHHHHHhcCCCceEEEee--cCcchhh---------
Q 008319 264 SITDKDWEDIKF-GVDNQVDFYAVSF----VK-----DAKVVHELKDYLKSCNADIHVIVKI--ESADSIP--------- 322 (570)
Q Consensus 264 ~lt~kD~~dI~~-~~~~gvd~I~~Sf----V~-----sa~dv~~vr~~l~~~~~~i~IiaKI--Et~~gv~--------- 322 (570)
.++..|+..|.. -.+.|++.|=+.| +. +..+...++.+.+. ..++.+.+.+ =+.-|+.
T Consensus 43 ~~~tedKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl~~d~~e~lr~l~~~-~~~~~l~~L~R~~N~~G~~~ypddv~~~ 121 (539)
T 1rqb_A 43 RMAMEDMVGACADIDAAGYWSVECWGGATYDSCIRFLNEDPWERLRTFRKL-MPNSRLQMLLRGQNLLGYRHYNDEVVDR 121 (539)
T ss_dssp CCCGGGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHH-CTTSCEEEEECGGGTTSSSCCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcccccccchhccCCCHHHHHHHHHHh-CCCCEEEEEeccccccCcccCcccccHH
Confidence 567778766644 4468999986653 11 45555555554432 2455555544 1222332
Q ss_pred hHHHHHHh-CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHH-HHHhCc
Q 008319 323 NLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGA 400 (570)
Q Consensus 323 NldeIl~~-sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~ 400 (570)
+++..++. .|.|-|- ....++ ...+..++.++++|+.+-.+= |+...+.-+...+.+++. +...|+
T Consensus 122 ~ve~a~~aGvd~vrIf-------~s~sd~-~ni~~~i~~ak~~G~~v~~~i----~~~~~~~~~~e~~~~~a~~l~~~Ga 189 (539)
T 1rqb_A 122 FVDKSAENGMDVFRVF-------DAMNDP-RNMAHAMAAVKKAGKHAQGTI----CYTISPVHTVEGYVKLAGQLLDMGA 189 (539)
T ss_dssp HHHHHHHTTCCEEEEC-------CTTCCT-HHHHHHHHHHHHTTCEEEEEE----ECCCSTTCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCCCEEEEE-------EehhHH-HHHHHHHHHHHHCCCeEEEEE----EeeeCCCCCHHHHHHHHHHHHHcCC
Confidence 23444444 6755542 122222 345788999999999873210 222333334444555554 566799
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHHHh
Q 008319 401 DAVMLSGETAHGKFPLKAVKVMHTVALRT 429 (570)
Q Consensus 401 D~vmLs~ETA~G~yP~eaV~~m~~I~~~a 429 (570)
|.+.|. +|+=+-.|-++-+.+..+..+.
T Consensus 190 d~I~L~-DT~G~~~P~~v~~lv~~l~~~~ 217 (539)
T 1rqb_A 190 DSIALK-DMAALLKPQPAYDIIKAIKDTY 217 (539)
T ss_dssp SEEEEE-ETTCCCCHHHHHHHHHHHHHHH
T ss_pred CEEEeC-CCCCCcCHHHHHHHHHHHHHhc
Confidence 999985 7887788999999988888776
No 353
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=32.44 E-value=1.4e+02 Score=28.24 Aligned_cols=65 Identities=15% Similarity=0.142 Sum_probs=38.4
Q ss_pred hhhhhhcCCcEEEec-----CCCChhHHHHHHHHHHhcCCCceEEE--eecCcchhhhHHHHHHh-CCEEEEcCCCcc
Q 008319 273 IKFGVDNQVDFYAVS-----FVKDAKVVHELKDYLKSCNADIHVIV--KIESADSIPNLHSIISA-SDGAMVARGDLG 342 (570)
Q Consensus 273 I~~~~~~gvd~I~~S-----fV~sa~dv~~vr~~l~~~~~~i~Iia--KIEt~~gv~NldeIl~~-sDgImIgrGDLg 342 (570)
.+...+.|+|++-+. |.........+++.-+. .++++++ .|.++ +.+++.++. +|++++|+..|.
T Consensus 36 a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~--~~ipvi~~ggI~~~---~~~~~~~~~Gad~V~lg~~~l~ 108 (253)
T 1thf_D 36 GKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQ--IDIPFTVGGGIHDF---ETASELILRGADKVSINTAAVE 108 (253)
T ss_dssp HHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTT--CCSCEEEESSCCSH---HHHHHHHHTTCSEEEESHHHHH
T ss_pred HHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHh--CCCCEEEeCCCCCH---HHHHHHHHcCCCEEEEChHHHh
Confidence 345567899987654 22222333444443332 3456665 56554 456666666 999999987663
No 354
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=32.43 E-value=61 Score=34.62 Aligned_cols=54 Identities=17% Similarity=0.177 Sum_probs=34.8
Q ss_pred ceEEEecCCCCCCHHHHHH------HHHhCCcEEEEecCC----C-----ChHHHHHHHHHHHHHHhhc
Q 008319 101 TKIVCTIGPSTSSREMIWK------LAEEGMNVARLNMSH----G-----DHASHQKTIDLVKEYNSQF 154 (570)
Q Consensus 101 tKIi~TiGPs~~~~e~l~~------li~~Gm~v~RiN~sH----g-----~~e~~~~~i~~ir~~~~~~ 154 (570)
.-+++.||.+..+++..+. .+..|+|.+=||+|- | +.+...++++.+|++..++
T Consensus 180 ~~vgvni~~~~~~~~~~~dy~~~a~~l~~~aD~ieiNiscPnt~Glr~lq~~~~l~~il~~v~~~~~~~ 248 (443)
T 1tv5_A 180 HIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNL 248 (443)
T ss_dssp CEEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEecCcccchHHHHHHHHHHHHHhcCCCEEEEeccCCCCcccccccCHHHHHHHHHHHHHHHhhh
Confidence 3588899887644333332 333579999999972 2 2356677888888765443
No 355
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=32.41 E-value=82 Score=32.06 Aligned_cols=82 Identities=9% Similarity=0.089 Sum_probs=49.5
Q ss_pred hcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh--CCEEEEcCCCcccCCCCCCHHHHHH
Q 008319 278 DNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQE 355 (570)
Q Consensus 278 ~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~--sDgImIgrGDLg~eig~~~v~~~qk 355 (570)
+.|+++|==|+- ++|+..++++-+. ..++|+ -=|+....+.+.++++. +|++++-++-.| | + .--.
T Consensus 213 ~~~i~~iEqP~~--~~~~~~~~~l~~~--~~ipIa-~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~G---G---i-t~~~ 280 (370)
T 1nu5_A 213 EAGVELVEQPVP--RANFGALRRLTEQ--NGVAIL-ADESLSSLSSAFELARDHAVDAFSLKLCNMG---G---I-ANTL 280 (370)
T ss_dssp HHTCCEEECCSC--TTCHHHHHHHHHH--CSSEEE-ESTTCCSHHHHHHHHHTTCCSEEEECHHHHT---S---H-HHHH
T ss_pred hcCcceEeCCCC--cccHHHHHHHHHh--CCCCEE-eCCCCCCHHHHHHHHHhCCCCEEEEchhhcC---C---H-HHHH
Confidence 345555544431 2344444333222 245544 45777777888888877 999999543332 1 1 2235
Q ss_pred HHHHHHHHcCCCEEEE
Q 008319 356 DIIRRCRSMQKPVIVA 371 (570)
Q Consensus 356 ~Ii~~c~~~gKPviva 371 (570)
+++..|+++|.++.+.
T Consensus 281 ~i~~~A~~~g~~~~~~ 296 (370)
T 1nu5_A 281 KVAAVAEAAGISSYGG 296 (370)
T ss_dssp HHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHcCCcEEec
Confidence 7899999999998763
No 356
>2kct_A Cytochrome C-type biogenesis protein CCME; solution structure, heme chaperone, cytochrome C biogenesis, OB-fold domain, NESG, PSI-2; NMR {Desulfovibrio vulgaris str}
Probab=32.41 E-value=1e+02 Score=25.95 Aligned_cols=55 Identities=20% Similarity=0.205 Sum_probs=38.8
Q ss_pred CCCeeeeccC--CCceeec-CCCEEEEEEecCCCCccEEEeccCCcc-cccccCCEEEE
Q 008319 166 KGPEVRSGDV--PQPIILK-EGQEFNFTIKRGVSTEDTVSVNYDDFV-NDVEVGDILLV 220 (570)
Q Consensus 166 ~GpkiR~G~~--~~~i~l~-~G~~v~lt~~~~~~~~~~i~v~~~~l~-~~v~~Gd~I~i 220 (570)
.|..+|+|.+ ++++.-. .|..++|...+.......++|.|..++ +.++.|.-|..
T Consensus 7 ~~~~iRvgG~V~~GSv~r~~~~~~v~F~vtD~~~~~~~v~V~Y~GilPDlFrEGqgVV~ 65 (94)
T 2kct_A 7 KLHTVRLFGTVAADGLTMLDGAPGVRFRLEDKDNTSKTVWVLYKGAVPDTFKPGVEVII 65 (94)
T ss_dssp TTCCEEEEEEECSTTCEECTTSSEEEEEEECSSCTTCEEEEEEESCCCTTCCTTCEEEE
T ss_pred CCCeEEEeeEEeCCeEEecCCCCEEEEEEEcCCCCCcEEEEEECCCCCccccCCCeEEE
Confidence 5778999976 2344444 477899987644334578999998644 67788988876
No 357
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=32.34 E-value=1.5e+02 Score=29.58 Aligned_cols=95 Identities=17% Similarity=0.131 Sum_probs=52.4
Q ss_pred HHHHHh-CCEEEEcC--CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHH-HhHHHHHHHhCc
Q 008319 325 HSIISA-SDGAMVAR--GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (570)
Q Consensus 325 deIl~~-sDgImIgr--GDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~ 400 (570)
+..++. +|||++.= |+. ..+..++-..+.+..++.++ -..||+.- ....+-+| +.-.-.|-..|+
T Consensus 43 ~~li~~Gv~gi~v~GttGE~-~~Lt~~Er~~v~~~~~~~~~-grvpviaG---------vg~~~t~~ai~la~~a~~~Ga 111 (304)
T 3l21_A 43 NHLVDQGCDGLVVSGTTGES-PTTTDGEKIELLRAVLEAVG-DRARVIAG---------AGTYDTAHSIRLAKACAAEGA 111 (304)
T ss_dssp HHHHHTTCSEEEESSTTTTG-GGSCHHHHHHHHHHHHHHHT-TTSEEEEE---------CCCSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEeCccccch-hhCCHHHHHHHHHHHHHHhC-CCCeEEEe---------CCCCCHHHHHHHHHHHHHcCC
Confidence 333444 89999841 111 11222332333333333332 24688864 23344455 555567777899
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHHHhh
Q 008319 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (570)
Q Consensus 401 D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE 430 (570)
|++|+..=--...-+-+.++....|+..+.
T Consensus 112 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 141 (304)
T 3l21_A 112 HGLLVVTPYYSKPPQRGLQAHFTAVADATE 141 (304)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHTSCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999996432222236778888899987764
No 358
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=32.31 E-value=1.1e+02 Score=32.67 Aligned_cols=110 Identities=13% Similarity=0.185 Sum_probs=0.0
Q ss_pred hhHHHhhhhhhcCCcEEEec---CCCChhHHHHHHHHHHhcCCCceEEE--eecCcchhhhHHHHHHhCCEEEEcCCCcc
Q 008319 268 KDWEDIKFGVDNQVDFYAVS---FVKDAKVVHELKDYLKSCNADIHVIV--KIESADSIPNLHSIISASDGAMVARGDLG 342 (570)
Q Consensus 268 kD~~dI~~~~~~gvd~I~~S---fV~sa~dv~~vr~~l~~~~~~i~Iia--KIEt~~gv~NldeIl~~sDgImIgrGDLg 342 (570)
++.+++..+++.|+|+|++. .....-|+....+++.....++.+|+ -|-|++-+..+-+. +||+.|| +
T Consensus 165 h~~eE~~~A~~lga~iIGinnr~L~t~~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~---a~avLVG----e 237 (452)
T 1pii_A 165 SNEEEQERAIALGAKVVGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSHF---ANGFLIG----S 237 (452)
T ss_dssp CSHHHHHHHHHTTCSEEEEESEETTTTEECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTTT---CSEEEEC----H
T ss_pred CCHHHHHHHHHCCCCEEEEeCCCCCCCCCCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHHh---CCEEEEc----H
Q ss_pred cCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEE
Q 008319 343 AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAV 403 (570)
Q Consensus 343 ~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~v 403 (570)
.=|..++.....++++ .|+--|+ --|+.| |+..++..|+|++
T Consensus 238 almr~~d~~~~~~~l~-----~~~~KIC------------Git~~e--da~~a~~~Gad~i 279 (452)
T 1pii_A 238 ALMAHDDLHAAVRRVL-----LGENKVC------------GLTRGQ--DAKAAYDAGAIYG 279 (452)
T ss_dssp HHHTCSCHHHHHHHHH-----HCSCEEC------------CCCSHH--HHHHHHHHTCSEE
T ss_pred HHcCCcCHHHHHHHHH-----HHhcccc------------CCCcHH--HHHHHHhcCCCEE
No 359
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=32.13 E-value=1.7e+02 Score=29.40 Aligned_cols=93 Identities=18% Similarity=0.217 Sum_probs=52.7
Q ss_pred HHHHHh-CCEEEEcCCCcc--cCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHH-HhHHHHHHHhCc
Q 008319 325 HSIISA-SDGAMVARGDLG--AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (570)
Q Consensus 325 deIl~~-sDgImIgrGDLg--~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~ 400 (570)
+-.++. +|||++. |=-| ..+..++-..+.+..++.+ -..|||.- ....+-+| +.-.-.|-..|+
T Consensus 36 ~~li~~Gv~Gl~v~-GtTGE~~~Lt~~Er~~v~~~~v~~~--grvpViaG---------vg~~~t~~ai~la~~A~~~Ga 103 (313)
T 3dz1_A 36 DFYAEVGCEGVTVL-GILGEAPKLDAAEAEAVATRFIKRA--KSMQVIVG---------VSAPGFAAMRRLARLSMDAGA 103 (313)
T ss_dssp HHHHHTTCSEEEES-TGGGTGGGSCHHHHHHHHHHHHHHC--TTSEEEEE---------CCCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHCCCCEEEeC-ccCcChhhCCHHHHHHHHHHHHHHc--CCCcEEEe---------cCCCCHHHHHHHHHHHHHcCC
Confidence 334444 8999984 1111 1122233333333333333 25788763 33344455 554567777899
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHHHhh
Q 008319 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (570)
Q Consensus 401 D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE 430 (570)
|++|+..=- .-.-+-+.++....|+..+.
T Consensus 104 davlv~~P~-~~~s~~~l~~~f~~va~a~~ 132 (313)
T 3dz1_A 104 AGVMIAPPP-SLRTDEQITTYFRQATEAIG 132 (313)
T ss_dssp SEEEECCCT-TCCSHHHHHHHHHHHHHHHC
T ss_pred CEEEECCCC-CCCCHHHHHHHHHHHHHhCC
Confidence 999996332 11224678899999998886
No 360
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=31.99 E-value=78 Score=30.48 Aligned_cols=103 Identities=14% Similarity=0.153 Sum_probs=63.4
Q ss_pred cEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh--CCEEEEcCCCcccCCCCCCHHHHHHHHHH
Q 008319 282 DFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIR 359 (570)
Q Consensus 282 d~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~--sDgImIgrGDLg~eig~~~v~~~qk~Ii~ 359 (570)
..+..|| +.+.+..+++. ..++.+..-.+... .+..+.++. .+++...- ..+-+..++
T Consensus 145 ~vii~SF--~~~~l~~~~~~----~p~~~~~~l~~~~~--~~~~~~~~~~~~~~i~~~~------------~~~~~~~v~ 204 (252)
T 3qvq_A 145 PLLFSSF--NYFALVSAKAL----WPEIARGYNVSAIP--SAWQERLEHLDCAGLHIHQ------------SFFDVQQVS 204 (252)
T ss_dssp CEEEEES--CHHHHHHHHHH----CTTSCEEEECSSCC--TTHHHHHHHHTCSEEEEEG------------GGCCHHHHH
T ss_pred CEEEEeC--CHHHHHHHHHH----CCCCcEEEEEecCc--hhHHHHHHHcCCeEEecch------------hhCCHHHHH
Confidence 4677777 56666666654 34555544444321 233344443 44444321 122357899
Q ss_pred HHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHH
Q 008319 360 RCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 424 (570)
Q Consensus 360 ~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~ 424 (570)
.++++|++|.+=|- -+..+...++..|+|+|+- +||..+.+.+.+
T Consensus 205 ~~~~~G~~v~~WTv-------------n~~~~~~~l~~~GVdgIiT-------D~P~~~~~~l~~ 249 (252)
T 3qvq_A 205 DIKAAGYKVLAFTI-------------NDESLALKLYNQGLDAVFS-------DYPQKIQSAIDS 249 (252)
T ss_dssp HHHHTTCEEEEECC-------------CCHHHHHHHHHTTCCEEEE-------SSHHHHHHHHHH
T ss_pred HHHHCCCEEEEEcC-------------CCHHHHHHHHHcCCCEEEe-------CCHHHHHHHHHH
Confidence 99999999998651 1233567888999999987 789888777653
No 361
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=31.88 E-value=2.4e+02 Score=26.29 Aligned_cols=132 Identities=14% Similarity=0.054 Sum_probs=69.2
Q ss_pred HHHhhhhhhcCCcEEEecCC----CChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEEcCCCcccC
Q 008319 270 WEDIKFGVDNQVDFYAVSFV----KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAE 344 (570)
Q Consensus 270 ~~dI~~~~~~gvd~I~~SfV----~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrGDLg~e 344 (570)
.+.++. ++.|+|++=+.|+ .-.+.++++|+.. .+..+.+-.|+-. .+-.-+++..+. +|++.+- +++
T Consensus 22 ~~~~~~-~~~~vd~ie~g~~~~~~~G~~~i~~lr~~~--~~~~i~ld~~l~d-~p~~~~~~~~~aGad~i~vh--~~~-- 93 (218)
T 3jr2_A 22 VAVASN-VASYVDVIEVGTILAFAEGMKAVSTLRHNH--PNHILVCDMKTTD-GGAILSRMAFEAGADWITVS--AAA-- 93 (218)
T ss_dssp HHHHHH-HGGGCSEEEECHHHHHHHTTHHHHHHHHHC--TTSEEEEEEEECS-CHHHHHHHHHHHTCSEEEEE--TTS--
T ss_pred HHHHHH-hcCCceEEEeCcHHHHhcCHHHHHHHHHhC--CCCcEEEEEeecc-cHHHHHHHHHhcCCCEEEEe--cCC--
Confidence 344443 4668998866654 2334444554432 1223333344432 122234566665 8998873 111
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCEEE-EccchhhhhcCCCcChHHHhHHHHHHHhCccEEEe-ccccc--CC-CCHHHHH
Q 008319 345 LPIEDVPLLQEDIIRRCRSMQKPVIV-ATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML-SGETA--HG-KFPLKAV 419 (570)
Q Consensus 345 ig~~~v~~~qk~Ii~~c~~~gKPviv-aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL-s~ETA--~G-~yP~eaV 419 (570)
-....++.++.++++|+.+++ . -++ +|-.+ +..+...|+|.+.+ .+-++ .| .+..+.+
T Consensus 94 -----~~~~~~~~~~~~~~~g~~~~~d~--------l~~-~T~~~---~~~~~~~g~d~v~~~~~~~~~~~g~~~~~~~l 156 (218)
T 3jr2_A 94 -----HIATIAACKKVADELNGEIQIEI--------YGN-WTMQD---AKAWVDLGITQAIYHRSRDAELAGIGWTTDDL 156 (218)
T ss_dssp -----CHHHHHHHHHHHHHHTCEEEEEC--------CSS-CCHHH---HHHHHHTTCCEEEEECCHHHHHHTCCSCHHHH
T ss_pred -----CHHHHHHHHHHHHHhCCccceee--------eec-CCHHH---HHHHHHcCccceeeeeccccccCCCcCCHHHH
Confidence 123457788889999998764 2 122 34323 33445569997654 33222 13 3455666
Q ss_pred HHHHHHH
Q 008319 420 KVMHTVA 426 (570)
Q Consensus 420 ~~m~~I~ 426 (570)
+.+++++
T Consensus 157 ~~i~~~~ 163 (218)
T 3jr2_A 157 DKMRQLS 163 (218)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7766665
No 362
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=31.87 E-value=1e+02 Score=28.91 Aligned_cols=122 Identities=12% Similarity=0.101 Sum_probs=72.3
Q ss_pred HHhhhhhhcCCcEEEecCCC-ChhHHHHHHHHHHhcCCCceEEE---eecC------cchhhhHHHHHHh-----CCEEE
Q 008319 271 EDIKFGVDNQVDFYAVSFVK-DAKVVHELKDYLKSCNADIHVIV---KIES------ADSIPNLHSIISA-----SDGAM 335 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~-sa~dv~~vr~~l~~~~~~i~Iia---KIEt------~~gv~NldeIl~~-----sDgIm 335 (570)
+.++.+.+.|+|+|-+..-. +..++.++++.+++.|-.+..+. .+-+ .++++.+...++. ++.|.
T Consensus 22 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~ 101 (275)
T 3qc0_A 22 EAVDICLKHGITAIAPWRDQVAAIGLGEAGRIVRANGLKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAELGADCLV 101 (275)
T ss_dssp HHHHHHHHTTCCEEECBHHHHHHHCHHHHHHHHHHHTCEESCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHTTCSCEE
T ss_pred HHHHHHHHcCCCEEEeccccccccCHHHHHHHHHHcCCceEEeecCCCcCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 55677889999999876421 34567888999988876544332 2222 1345556665554 56777
Q ss_pred EcCCCcccC-CC----CCCHHHHHHHHHHHHHHcCCCEEEEccchhhhh------cCCCcChHHHhHHHHHHH
Q 008319 336 VARGDLGAE-LP----IEDVPLLQEDIIRRCRSMQKPVIVATNMLESMI------DHPTPTRAEVSDIAIAVR 397 (570)
Q Consensus 336 IgrGDLg~e-ig----~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~------~~~~PtrAEv~Dv~nav~ 397 (570)
+.+|...-. .. ++.+....+++...|.+.|..+.+ |.+- .....|..++.++...+.
T Consensus 102 ~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~l-----E~~~~~~~~~~~~~~~~~~~~~l~~~~~ 169 (275)
T 3qc0_A 102 LVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAI-----EPLHPMYAADRACVNTLGQALDICETLG 169 (275)
T ss_dssp EECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEE-----CCCCGGGTTTTBSCCCHHHHHHHHHHHC
T ss_pred EeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEE-----eECCCcccCCccccCCHHHHHHHHHHhC
Confidence 776654211 11 123455567888888889988765 3221 123345556666555553
No 363
>1kzl_A Riboflavin synthase; biosynthesis of riboflavin, ligand binding, transferase; HET: CRM; 2.10A {Schizosaccharomyces pombe} SCOP: b.43.4.3 b.43.4.3
Probab=31.82 E-value=79 Score=30.44 Aligned_cols=54 Identities=19% Similarity=0.329 Sum_probs=43.1
Q ss_pred EEeccCCcccccccCCEEEEeCCeeEEEEEEEeCCeEEEEEE-------eCcEeccCcccccC
Q 008319 201 VSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVV-------DGGELKSRRHLNVR 256 (570)
Q Consensus 201 i~v~~~~l~~~v~~Gd~I~iDDG~i~l~V~~~~~~~i~~~v~-------~gG~l~s~KgIn~p 256 (570)
+.+..+.+.+.++.||.|-+|. ++|+|.+++++.+.+-+. +=|.++....||+.
T Consensus 25 l~i~~~~~~~~l~~g~SIAvnG--vcLTV~~~~~~~F~vdvipETl~~T~Lg~l~~Gd~VNLE 85 (208)
T 1kzl_A 25 MKIEAPQILDDCHTGDSIAVNG--TCLTVTDFDRYHFTVGIAPESLRLTNLGQCKAGDPVNLE 85 (208)
T ss_dssp EEEECGGGCTTCCTTCEEEETT--EEEEEEEECSSEEEEEECHHHHHHSSGGGCCTTCEEEEE
T ss_pred EEEechHHhcccCCCCEEEECC--EEeeEEEEcCCEEEEEEeHHHHhhccccccCCCCEEEec
Confidence 4454445779999999999997 899999999999888775 34667777778885
No 364
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=31.81 E-value=1.3e+02 Score=29.65 Aligned_cols=117 Identities=14% Similarity=0.144 Sum_probs=61.7
Q ss_pred HhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHhCCEEEEcCCCcccCCCCC-CH
Q 008319 272 DIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIE-DV 350 (570)
Q Consensus 272 dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDgImIgrGDLg~eig~~-~v 350 (570)
.++.+.+.|+|++.++=+.- +++.++.+.+++.|-+ .+.-+--....+.+++|.+.+.|....-.=.|+ .|.. .+
T Consensus 111 f~~~~~~aG~dGviv~Dl~~-ee~~~~~~~~~~~gl~--~i~liap~s~~eri~~ia~~~~gfiy~vs~~G~-TG~~~~~ 186 (271)
T 1ujp_A 111 FFGLFKQAGATGVILPDLPP-DEDPGLVRLAQEIGLE--TVFLLAPTSTDARIATVVRHATGFVYAVSVTGV-TGMRERL 186 (271)
T ss_dssp HHHHHHHHTCCEEECTTCCG-GGCHHHHHHHHHHTCE--EECEECTTCCHHHHHHHHTTCCSCEEEECC-----------
T ss_pred HHHHHHHcCCCEEEecCCCH-HHHHHHHHHHHHcCCc--eEEEeCCCCCHHHHHHHHHhCCCCEEEEecCcc-cCCCCCC
Confidence 34455678999888874432 5566777777776643 233332224457889999886654321100101 1211 11
Q ss_pred HHHHHHHHHHHHHc-CCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 351 PLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 351 ~~~qk~Ii~~c~~~-gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
..-..+.++..++. +.|+++. ...-|... +.. + .|+|+++.-
T Consensus 187 ~~~~~~~v~~vr~~~~~Pv~vG---------fGI~t~e~---a~~-~-~~ADgVIVG 229 (271)
T 1ujp_A 187 PEEVKDLVRRIKARTALPVAVG---------FGVSGKAT---AAQ-A-AVADGVVVG 229 (271)
T ss_dssp --CCHHHHHHHHTTCCSCEEEE---------SCCCSHHH---HHH-H-TTSSEEEEC
T ss_pred CccHHHHHHHHHhhcCCCEEEE---------cCCCCHHH---HHH-h-cCCCEEEEC
Confidence 11123445555554 7899874 23333333 333 3 899999874
No 365
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=31.57 E-value=42 Score=34.94 Aligned_cols=45 Identities=13% Similarity=0.248 Sum_probs=36.1
Q ss_pred ecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHH
Q 008319 106 TIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEY 150 (570)
Q Consensus 106 TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~ 150 (570)
.+|-.....+.++.++++|++++=++.+||..+...+.|+.+|+.
T Consensus 94 ~~g~~~~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~ 138 (361)
T 3r2g_A 94 SVGCTENELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQL 138 (361)
T ss_dssp EECSSHHHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHH
T ss_pred EcCCCHHHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHh
Confidence 345434567889999999999999999999887777778877764
No 366
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=31.51 E-value=2.5e+02 Score=28.47 Aligned_cols=114 Identities=16% Similarity=0.190 Sum_probs=72.4
Q ss_pred CCCceEEEeecCcchhhhHHHHHHh-CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccch---hhhhcC
Q 008319 306 NADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNML---ESMIDH 381 (570)
Q Consensus 306 ~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmL---eSM~~~ 381 (570)
+..++|..........+.+.+-++. ..-+|+ |.| ++|+++=...-+++++.|++.|..|=.==-.+ |.-...
T Consensus 72 ~~~VPValHLDHg~~~e~~~~ai~~GFtSVMi---DgS-~~p~eeNi~~Tk~vv~~ah~~gvsVEaELG~igG~Ed~~~~ 147 (307)
T 3n9r_A 72 YPHIPVALHLDHGTTFESCEKAVKAGFTSVMI---DAS-HHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGIEDNISV 147 (307)
T ss_dssp STTSCEEEEEEEECSHHHHHHHHHHTCSEEEE---CCT-TSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCC------
T ss_pred cCCCcEEEECCCCCCHHHHHHHHHhCCCcEEE---ECC-CCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCccc
Confidence 3678999999988766555555544 779999 444 45777777788999999999998873200000 100000
Q ss_pred ----CCcChHHHhHHHHHH-HhCccEEEecccccCCCCH-----HHHHHHHHHH
Q 008319 382 ----PTPTRAEVSDIAIAV-REGADAVMLSGETAHGKFP-----LKAVKVMHTV 425 (570)
Q Consensus 382 ----~~PtrAEv~Dv~nav-~~G~D~vmLs~ETA~G~yP-----~eaV~~m~~I 425 (570)
..-| +..+...++ .-|+|++-.+--|+.|.|+ .--...|.+|
T Consensus 148 ~~~~~~yT--~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I 199 (307)
T 3n9r_A 148 DEKDAVLV--NPKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEV 199 (307)
T ss_dssp ----CCSC--CHHHHHHHHHHHCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHH
T ss_pred ccccccCC--CHHHHHHHHHHHCCCEEEEecCCcccccCCCCCCccCHHHHHHH
Confidence 0011 122344445 3799999999999999995 3344555555
No 367
>2bti_A Carbon storage regulator homolog; RMSA, CSRA, RNA binding protein; 2.0A {Yersinia enterocolitica} PDB: 1y00_A
Probab=31.38 E-value=79 Score=24.85 Aligned_cols=31 Identities=19% Similarity=0.272 Sum_probs=25.7
Q ss_pred cccCCEEEEeCCeeEEEEEEEeCCeEEEEEEe
Q 008319 212 VEVGDILLVDGGMMSLAVKSKTKDLVKCIVVD 243 (570)
Q Consensus 212 v~~Gd~I~iDDG~i~l~V~~~~~~~i~~~v~~ 243 (570)
-++|+.|.|+| .|..+|.++.++.|..-+.-
T Consensus 8 Rk~GE~I~Igd-~I~I~Vl~i~g~~VrlGI~A 38 (63)
T 2bti_A 8 RRVGETLMIGD-EVTVTVLGVKGNQVRIGVNA 38 (63)
T ss_dssp EETTCEEEETT-TEEEEEEEEETTEEEEEEEE
T ss_pred ccCCCeEEeCC-CEEEEEEEEeCCEEEEEEEC
Confidence 37899999987 89999999999988765443
No 368
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=31.14 E-value=2.4e+02 Score=26.09 Aligned_cols=39 Identities=10% Similarity=0.055 Sum_probs=27.4
Q ss_pred HHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCce
Q 008319 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIH 310 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~ 310 (570)
+.++.+.+.|+|+|-+.+- ...++.++++.+++.|-.+.
T Consensus 19 ~~l~~~~~~G~~~vEl~~~-~~~~~~~~~~~l~~~gl~~~ 57 (260)
T 1k77_A 19 ERFAAARKAGFDAVEFLFP-YNYSTLQIQKQLEQNHLTLA 57 (260)
T ss_dssp GHHHHHHHHTCSEEECSCC-TTSCHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHhCCCEEEecCC-CCCCHHHHHHHHHHcCCceE
Confidence 4566777899999988753 34457788888887665433
No 369
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=31.08 E-value=57 Score=32.49 Aligned_cols=53 Identities=11% Similarity=0.171 Sum_probs=40.4
Q ss_pred ceEEEeecCcchhhhHHHHHHhCCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 309 IHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 309 i~IiaKIEt~~gv~NldeIl~~sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
.++++ ++.+.++|+++.+|++.|++|=|. ++........++.+++.++|+++-
T Consensus 42 sP~M~-----~~~~e~~e~~~~a~alvIn~G~l~-----~~~~~~~~~a~~~a~~~~~PvVlD 94 (273)
T 3dzv_A 42 KPIMA-----DDPREFPQMFQQTSALVLNLGHLS-----QEREQSLLAASDYARQVNKLTVVD 94 (273)
T ss_dssp EEECC-----CCGGGHHHHHTTCSEEEEECCSCC-----HHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred chhhc-----CCHHHHHHHHHHCCeEEEecCCCC-----hHHHHHHHHHHHHHHHcCCcEEEc
Confidence 45665 346788999999999999987653 344566677888899999999874
No 370
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=30.99 E-value=2.8e+02 Score=26.03 Aligned_cols=130 Identities=12% Similarity=0.115 Sum_probs=63.8
Q ss_pred hHHHhhhhhhcCCcEEEecC--CCChhHHHHHHHHHHhcCCCceEEE-----eecCc--------chhhhHHHHHHh-CC
Q 008319 269 DWEDIKFGVDNQVDFYAVSF--VKDAKVVHELKDYLKSCNADIHVIV-----KIESA--------DSIPNLHSIISA-SD 332 (570)
Q Consensus 269 D~~dI~~~~~~gvd~I~~Sf--V~sa~dv~~vr~~l~~~~~~i~Iia-----KIEt~--------~gv~NldeIl~~-sD 332 (570)
+.+++..+++.|+|.|.+.- .++++. ++++ +..+..+.+-. ++++. ...+-+..+.+. ++
T Consensus 84 ~~~~~~~~~~~Gad~V~lg~~~l~~p~~---~~~~-~~~g~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~ 159 (241)
T 1qo2_A 84 SLDYAEKLRKLGYRRQIVSSKVLEDPSF---LKSL-REIDVEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLKEYGLE 159 (241)
T ss_dssp SHHHHHHHHHTTCCEEEECHHHHHCTTH---HHHH-HTTTCEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHHHTTTCC
T ss_pred CHHHHHHHHHCCCCEEEECchHhhChHH---HHHH-HHcCCcEEEEEEecCCEEEECCceecCCCCHHHHHHHHHhCCCC
Confidence 34566667778999987762 233333 3344 33443332212 23332 112222333333 67
Q ss_pred EEEEcCCC-cccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHh-----C-ccEEEe
Q 008319 333 GAMVARGD-LGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE-----G-ADAVML 405 (570)
Q Consensus 333 gImIgrGD-Lg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~-----G-~D~vmL 405 (570)
.|++..-+ =+...|. ++ ...+++. .....|++. ....-+..+ +..+... | +|++++
T Consensus 160 ~i~~t~~~~~g~~~g~-~~-~~i~~l~---~~~~iPvia---------~GGI~~~~d---~~~~~~~~~~~~G~adgv~v 222 (241)
T 1qo2_A 160 EIVHTEIEKDGTLQEH-DF-SLTKKIA---IEAEVKVLA---------AGGISSENS---LKTAQKVHTETNGLLKGVIV 222 (241)
T ss_dssp EEEEEETTHHHHTCCC-CH-HHHHHHH---HHHTCEEEE---------ESSCCSHHH---HHHHHHHHHHTTTSEEEEEE
T ss_pred EEEEEeecccccCCcC-CH-HHHHHHH---HhcCCcEEE---------ECCCCCHHH---HHHHHhcccccCCeEeEEEe
Confidence 77774210 0111222 22 2223333 334899985 344544444 4445555 9 999998
Q ss_pred cccccCCCCHHHHH
Q 008319 406 SGETAHGKFPLKAV 419 (570)
Q Consensus 406 s~ETA~G~yP~eaV 419 (570)
..---.|.++++.+
T Consensus 223 gsal~~~~~~~~~~ 236 (241)
T 1qo2_A 223 GRAFLEGILTVEVM 236 (241)
T ss_dssp CHHHHTTSSCHHHH
T ss_pred eHHHHcCCCCHHHH
Confidence 65444567665543
No 371
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=30.96 E-value=1.8e+02 Score=29.70 Aligned_cols=95 Identities=18% Similarity=0.209 Sum_probs=53.0
Q ss_pred HHHHHh-CCEEEEcC--CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHH-HhHHHHHHHhCc
Q 008319 325 HSIISA-SDGAMVAR--GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (570)
Q Consensus 325 deIl~~-sDgImIgr--GDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~ 400 (570)
+-.++. +|||++.= |+ +..+..++-..+.+..++.++ -..|||.- ....+-+| +.-.-.|-..|+
T Consensus 59 ~~li~~Gv~Gl~v~GtTGE-~~~Ls~eEr~~vi~~~ve~~~-grvpViaG---------vg~~st~eai~la~~A~~~Ga 127 (343)
T 2v9d_A 59 DDLIKAGVDGLFFLGSGGE-FSQLGAEERKAIARFAIDHVD-RRVPVLIG---------TGGTNARETIELSQHAQQAGA 127 (343)
T ss_dssp HHHHHTTCSCEEESSTTTT-GGGSCHHHHHHHHHHHHHHHT-TSSCEEEE---------CCSSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEeCccccC-hhhCCHHHHHHHHHHHHHHhC-CCCcEEEe---------cCCCCHHHHHHHHHHHHhcCC
Confidence 334444 89998841 11 112222333333344444332 24788864 33344455 444556677899
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHHHhh
Q 008319 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (570)
Q Consensus 401 D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE 430 (570)
|++|+..=--...-+-+.++....|+..++
T Consensus 128 davlv~~P~Y~~~s~~~l~~~f~~VA~a~~ 157 (343)
T 2v9d_A 128 DGIVVINPYYWKVSEANLIRYFEQVADSVT 157 (343)
T ss_dssp SEEEEECCSSSCCCHHHHHHHHHHHHHTCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999986432223335677889899987664
No 372
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=30.87 E-value=1.9e+02 Score=29.03 Aligned_cols=94 Identities=15% Similarity=0.165 Sum_probs=61.4
Q ss_pred hHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHhCCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEc
Q 008319 293 KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVAT 372 (570)
Q Consensus 293 ~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaT 372 (570)
+-++.++++.++. .+.++.-+-.++.++- +.+.+|.+-||-+++- ..+ +++.+.+.||||++.|
T Consensus 78 ~GL~~L~~~~~e~--Glp~~Tev~d~~~v~~---l~~~vd~lqIgA~~~~------n~~-----LLr~va~~gkPVilK~ 141 (285)
T 3sz8_A 78 EGLKIFAEVKARF--GVPVITDVHEAEQAAP---VAEIADVLQVPAFLAR------QTD-----LVVAIAKAGKPVNVKK 141 (285)
T ss_dssp HHHHHHHHHHHHH--CCCEEEECCSGGGHHH---HHTTCSEEEECGGGTT------CHH-----HHHHHHHTSSCEEEEC
T ss_pred HHHHHHHHHHHhc--CCeEEEEeCCHHHHHH---HHHhCCEEEECccccC------CHH-----HHHHHHccCCcEEEeC
Confidence 4566677777654 4668887766666554 4455999999966652 333 5666668999999865
Q ss_pred cchhhhhcCCCcChHHHhHHHHHHH-hCccEEEeccccc
Q 008319 373 NMLESMIDHPTPTRAEVSDIAIAVR-EGADAVMLSGETA 410 (570)
Q Consensus 373 qmLeSM~~~~~PtrAEv~Dv~nav~-~G~D~vmLs~ETA 410 (570)
.|. -|..|+...+..+. .|.+-++|..=+.
T Consensus 142 G~~--------~t~~ei~~ave~i~~~Gn~~i~L~erg~ 172 (285)
T 3sz8_A 142 PQF--------MSPTQLKHVVSKCGEVGNDRVMLCERGS 172 (285)
T ss_dssp CTT--------SCGGGTHHHHHHHHHTTCCCEEEEECCE
T ss_pred CCC--------CCHHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 542 35566666666664 4777677754333
No 373
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=30.85 E-value=52 Score=31.69 Aligned_cols=83 Identities=11% Similarity=-0.003 Sum_probs=51.6
Q ss_pred HHHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEEcCCCcccCCCCC
Q 008319 270 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIE 348 (570)
Q Consensus 270 ~~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrGDLg~eig~~ 348 (570)
.+..+.+.+.|+|++.+|- ..++++..+|+.+ +.-+.+..=|=-..| +..+.++. +|.++|||+=+..+=|.+
T Consensus 125 ~~~a~~a~~~g~~GvV~sa-t~p~e~~~ir~~~---~~~~~vtPGI~~~g~--tp~~a~~~Gad~iVVGR~I~~A~dP~~ 198 (222)
T 4dbe_A 125 DYIKNVIREISPKGIVVGG-TKLDHITQYRRDF---EKMTIVSPGMGSQGG--SYGDAVCAGADYEIIGRSIYNAGNPLT 198 (222)
T ss_dssp HHHHHHHHHHCCSEEEECT-TCHHHHHHHHHHC---TTCEEEECCBSTTSB--CTTHHHHHTCSEEEECHHHHTSSSHHH
T ss_pred HHHHHHHHHhCCCEEEECC-CCHHHHHHHHHhC---CCCEEEcCCcccCcc--CHHHHHHcCCCEEEECHHhcCCCCHHH
Confidence 4455667788999988773 3467888888765 332334444532222 56565655 999999998887765544
Q ss_pred CHHHHHHHHH
Q 008319 349 DVPLLQEDII 358 (570)
Q Consensus 349 ~v~~~qk~Ii 358 (570)
....++++|-
T Consensus 199 aa~~i~~~i~ 208 (222)
T 4dbe_A 199 ALRTINKIIE 208 (222)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4444444443
No 374
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=30.82 E-value=2.7e+02 Score=28.22 Aligned_cols=105 Identities=15% Similarity=0.191 Sum_probs=55.1
Q ss_pred HHHHHHhcCCCceEEEeecCc------chhhhHHHHHHh-CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHc-CCCEE
Q 008319 298 LKDYLKSCNADIHVIVKIESA------DSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSM-QKPVI 369 (570)
Q Consensus 298 vr~~l~~~~~~i~IiaKIEt~------~gv~NldeIl~~-sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~-gKPvi 369 (570)
.++.-...+.+..|+|..|.. ++++....-.++ +|+||+- ++... . .+-+.|++. ++|+.
T Consensus 152 a~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~--------~~~~~-~---~~~~i~~~~~~~Pv~ 219 (307)
T 3lye_A 152 AVATKRRLRSDFVLIARTDALQSLGYEECIERLRAARDEGADVGLLE--------GFRSK-E---QAAAAVAALAPWPLL 219 (307)
T ss_dssp HHHHHHHTTCCCEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEEC--------CCSCH-H---HHHHHHHHHTTSCBE
T ss_pred HHHHHHhcCCCeEEEEechhhhccCHHHHHHHHHHHHHCCCCEEEec--------CCCCH-H---HHHHHHHHccCCcee
Confidence 334333446788999999986 444455554445 8999983 22222 2 233334443 58885
Q ss_pred EEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHH-HHHHHHHHHHHHh
Q 008319 370 VATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPL-KAVKVMHTVALRT 429 (570)
Q Consensus 370 vaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~-eaV~~m~~I~~~a 429 (570)
+ +|++. -..|..+.+|. -..|+..++.. .... -+.+.|.+...+.
T Consensus 220 ~--n~~~~-g~~p~~t~~eL------~~lGv~~v~~~------~~~~raa~~a~~~~~~~l 265 (307)
T 3lye_A 220 L--NSVEN-GHSPLITVEEA------KAMGFRIMIFS------FATLAPAYAAIRETLVRL 265 (307)
T ss_dssp E--EEETT-SSSCCCCHHHH------HHHTCSEEEEE------TTTHHHHHHHHHHHHHHH
T ss_pred E--EeecC-CCCCCCCHHHH------HHcCCeEEEEC------hHHHHHHHHHHHHHHHHH
Confidence 4 23331 12344455444 44688777542 1122 3555555555443
No 375
>1i8d_A Riboflavin synthase; riboflavin biosynthesis, antimicrobial target, structure-based design, transferase; 2.00A {Escherichia coli} SCOP: b.43.4.3 b.43.4.3 PDB: 1hze_A* 1i18_A* 1pkv_A*
Probab=30.73 E-value=99 Score=29.87 Aligned_cols=48 Identities=23% Similarity=0.347 Sum_probs=40.0
Q ss_pred CcccccccCCEEEEeCCeeEEEEEEEeCCeEEEEEEe-------CcEeccCcccccC
Q 008319 207 DFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVD-------GGELKSRRHLNVR 256 (570)
Q Consensus 207 ~l~~~v~~Gd~I~iDDG~i~l~V~~~~~~~i~~~v~~-------gG~l~s~KgIn~p 256 (570)
.+.+.++.||.|-+|. ++|+|.+++++.+.+-+.. =|.++....||+.
T Consensus 31 ~~~~~l~~g~SIAvnG--vcLTV~~v~~~~F~vdvipETl~~T~Lg~l~~Gd~VNLE 85 (213)
T 1i8d_A 31 HMLDGLETGASVAHNG--CCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVE 85 (213)
T ss_dssp GGTTTCCTTCEEEETT--EEEEEEEEETTEEEEEEEHHHHHHSGGGGCCTTCEEEEE
T ss_pred HHhccCCCCcEEEECC--EEeeEEEEcCCEEEEEEeHHHHhhcccccCCCCCEEEeC
Confidence 5678999999999997 8999999999998888763 4667777778875
No 376
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=30.62 E-value=1.4e+02 Score=29.63 Aligned_cols=95 Identities=13% Similarity=0.060 Sum_probs=51.9
Q ss_pred HHHHHh-CCEEEEcCCCc--ccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHH-HhHHHHHHHhCc
Q 008319 325 HSIISA-SDGAMVARGDL--GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (570)
Q Consensus 325 deIl~~-sDgImIgrGDL--g~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~ 400 (570)
+-.++. +||+++. |=- +..+..++-..+.+..++.++ -..|||.- ....+-+| +.-.-.|-..|+
T Consensus 29 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaG---------vg~~~t~~ai~la~~a~~~Ga 97 (292)
T 2ojp_A 29 DYHVASGTSAIVSV-GTTGESATLNHDEHADVVMMTLDLAD-GRIPVIAG---------TGANATAEAISLTQRFNDSGI 97 (292)
T ss_dssp HHHHHHTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEE---------CCCSSHHHHHHHHHHTTTSSC
T ss_pred HHHHHcCCCEEEEC-ccccchhhCCHHHHHHHHHHHHHHhC-CCCcEEEe---------cCCccHHHHHHHHHHHHhcCC
Confidence 444444 8999984 111 112222333333334443332 24788864 23344455 444455667799
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHHHhh
Q 008319 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (570)
Q Consensus 401 D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE 430 (570)
|++|+..=--...-+-+.++....|+..+.
T Consensus 98 davlv~~P~y~~~s~~~l~~~f~~ia~a~~ 127 (292)
T 2ojp_A 98 VGCLTVTPYYNRPSQEGLYQHFKAIAEHTD 127 (292)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHTTCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999986432222335677888888876554
No 377
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=30.60 E-value=1.7e+02 Score=29.09 Aligned_cols=95 Identities=19% Similarity=0.152 Sum_probs=52.9
Q ss_pred HHHHHh-CCEEEEcCCCcc--cCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHH-HhHHHHHHHhCc
Q 008319 325 HSIISA-SDGAMVARGDLG--AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (570)
Q Consensus 325 deIl~~-sDgImIgrGDLg--~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~ 400 (570)
+-.++. +|||++. |=-| ..+..++-..+.+..++.++ -..|||.- ....+-+| +.-.-.|-..|+
T Consensus 28 ~~li~~Gv~gi~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaG---------vg~~~t~~ai~la~~A~~~Ga 96 (297)
T 2rfg_A 28 DWQIKHGAHGLVPV-GTTGESPTLTEEEHKRVVALVAEQAQ-GRVPVIAG---------AGSNNPVEAVRYAQHAQQAGA 96 (297)
T ss_dssp HHHHHTTCSEEECS-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCBEEE---------CCCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEEC-ccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEc---------cCCCCHHHHHHHHHHHHhcCC
Confidence 444444 8999974 1111 12222333333344444332 24788864 23334455 444556677899
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHHHhh
Q 008319 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (570)
Q Consensus 401 D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE 430 (570)
|++|+..=--...-+-+.++....|+..+.
T Consensus 97 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 126 (297)
T 2rfg_A 97 DAVLCVAGYYNRPSQEGLYQHFKMVHDAID 126 (297)
T ss_dssp SEEEECCCTTTCCCHHHHHHHHHHHHHHCS
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999996432222335677888999987765
No 378
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=30.48 E-value=90 Score=29.62 Aligned_cols=129 Identities=13% Similarity=0.224 Sum_probs=84.8
Q ss_pred hhHHHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh------CCEEEEcCCCc
Q 008319 268 KDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA------SDGAMVARGDL 341 (570)
Q Consensus 268 kD~~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~------sDgImIgrGDL 341 (570)
+|.++++.+++..+++|++.+. +-..+.++-+.+++.++ .++.-++..+|+.+=++=+.. .|||+=
T Consensus 17 r~~~~l~~al~s~~~~ifll~g-~i~~l~~~v~~lk~~~K--~v~Vh~Dli~Gls~d~~ai~fL~~~~~pdGIIs----- 88 (192)
T 3kts_A 17 HNQKDMEKILELDLTYMVMLET-HVAQLKALVKYAQAGGK--KVLLHADLVNGLKNDDYAIDFLCTEICPDGIIS----- 88 (192)
T ss_dssp SSSHHHHHHTTSSCCEEEECSE-ETTTHHHHHHHHHHTTC--EEEEEGGGEETCCCSHHHHHHHHHTTCCSEEEE-----
T ss_pred cCHHHHHHHHcCCCCEEEEecC-cHHHHHHHHHHHHHcCC--eEEEecCchhccCCcHHHHHHHHhCCCCCEEEe-----
Confidence 6778899999989999999876 44555666666777776 566699998888753222222 677764
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHH
Q 008319 342 GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKV 421 (570)
Q Consensus 342 g~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~ 421 (570)
.+..++..+++.|..+|----+++|+... +.+-..-....|++ |--=|-.| ++
T Consensus 89 -----------Tk~~~i~~Ak~~gL~tIqR~FliDS~al~--------~~~~~i~~~~PD~i----EiLPGi~p----~i 141 (192)
T 3kts_A 89 -----------TRGNAIMKAKQHKMLAIQRLFMIDSSAYN--------KGVALIQKVQPDCI----ELLPGIIP----EQ 141 (192)
T ss_dssp -----------SCHHHHHHHHHTTCEEEEEEECCSHHHHH--------HHHHHHHHHCCSEE----EEECTTCH----HH
T ss_pred -----------CcHHHHHHHHHCCCeEEEEEEEEEcchHH--------HHHHHHhhcCCCEE----EECCchhH----HH
Confidence 45678999999999988765577776421 11222233456877 33345556 46
Q ss_pred HHHHHHHhhc
Q 008319 422 MHTVALRTES 431 (570)
Q Consensus 422 m~~I~~~aE~ 431 (570)
+..+.++...
T Consensus 142 I~~i~~~~~~ 151 (192)
T 3kts_A 142 VQKMTQKLHI 151 (192)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHhcCC
Confidence 6666666543
No 379
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=30.38 E-value=90 Score=32.15 Aligned_cols=63 Identities=16% Similarity=0.211 Sum_probs=42.0
Q ss_pred CceEEEecCCC--CCCHHH----HHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCCcEEEEeecC
Q 008319 100 KTKIVCTIGPS--TSSREM----IWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTK 166 (570)
Q Consensus 100 ~tKIi~TiGPs--~~~~e~----l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~ 166 (570)
+....++.|.. ..+++. .+++.++|.+.+.|+..|++.+.-.+.++.+|++. + ..+.|++|..
T Consensus 150 ~v~~y~~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---g-~~~~l~vDan 218 (392)
T 1tzz_A 150 RVFVYAAGGYYYPGKGLSMLRGEMRGYLDRGYNVVKMKIGGAPIEEDRMRIEAVLEEI---G-KDAQLAVDAN 218 (392)
T ss_dssp EEEEEEECCCC----CHHHHHHHHHHHHTTTCSEEEEECSSSCHHHHHHHHHHHHHHH---T-TTCEEEEECT
T ss_pred CeeEEEeCCcccCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhc---C-CCCeEEEECC
Confidence 34555554431 124443 46678899999999999988877778888887653 4 4466777753
No 380
>1vpz_A Carbon storage regulator homolog; CSRA-like fold, structural genomics, joint center for struct genomics, JCSG; HET: MSE; 2.05A {Pseudomonas aeruginosa} SCOP: b.151.1.1
Probab=30.35 E-value=70 Score=25.89 Aligned_cols=33 Identities=21% Similarity=0.252 Sum_probs=26.8
Q ss_pred ccccccCCEEEEeCCeeEEEEEEEeCCeEEEEEE
Q 008319 209 VNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVV 242 (570)
Q Consensus 209 ~~~v~~Gd~I~iDDG~i~l~V~~~~~~~i~~~v~ 242 (570)
.-.=++|+.|.|.| .|..+|.++.++.|..-+.
T Consensus 15 vLtRK~GEsI~IGd-dI~ItVl~i~g~qVrLGI~ 47 (73)
T 1vpz_A 15 ILTRRVGETLMVGD-DVTVTVLGVKGNQVRIGVN 47 (73)
T ss_dssp EEEEETTCEEEETT-TEEEEEEEEETTEEEEEEE
T ss_pred EEEccCCCEEEeCC-CEEEEEEEEeCCEEEEEEE
Confidence 33458999999998 8999999999998876443
No 381
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=30.33 E-value=1.1e+02 Score=29.50 Aligned_cols=64 Identities=17% Similarity=0.209 Sum_probs=39.3
Q ss_pred HHhcCCCceEEEeecCcchhhhHHHHHHhCCEEEEcCCC-----cccCCCCC-------CHHHHHHHHHHHHHHcCCCEE
Q 008319 302 LKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGD-----LGAELPIE-------DVPLLQEDIIRRCRSMQKPVI 369 (570)
Q Consensus 302 l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDgImIgrGD-----Lg~eig~~-------~v~~~qk~Ii~~c~~~gKPvi 369 (570)
+.++|..+.++.-.+.. + +++.++..|||++.-|. +=-+-+.+ .-......+++.+.+.+||+.
T Consensus 37 l~~aG~~pv~lp~~~~~---~-~~~~l~~~DGlil~GG~~v~P~~yg~~~~~~~~~~~~~rd~~~~~lir~a~~~~~PiL 112 (254)
T 3fij_A 37 IQKVGGFPIALPIDDPS---T-AVQAISLVDGLLLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIF 112 (254)
T ss_dssp HHHHTCEEEEECCCCGG---G-HHHHHHTCSEEEECCCSCCCGGGGTCCCCTTCCCCCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred HHHCCCEEEEEeCCCch---H-HHHHHhhCCEEEECCCCCCChhhcCCccCcccCCcChhhhHHHHHHHHHHHHcCCCEE
Confidence 34456655555443332 3 77888889999998872 10011111 122346688999999999985
No 382
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=30.24 E-value=1.7e+02 Score=29.32 Aligned_cols=95 Identities=15% Similarity=0.145 Sum_probs=51.9
Q ss_pred HHHHHh-CCEEEEcCCCc--ccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHH-HhHHHHHHHhCc
Q 008319 325 HSIISA-SDGAMVARGDL--GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (570)
Q Consensus 325 deIl~~-sDgImIgrGDL--g~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~ 400 (570)
+-.++. +|||++. |=- +..+..++-..+.+..++.++ -..|||.- ....+-+| +.-.-.|-..|+
T Consensus 40 ~~li~~Gv~gl~v~-GtTGE~~~Ls~eEr~~vi~~~~~~~~-grvpViaG---------vg~~st~~ai~la~~A~~~Ga 108 (306)
T 1o5k_A 40 RYQLENGVNALIVL-GTTGESPTVNEDEREKLVSRTLEIVD-GKIPVIVG---------AGTNSTEKTLKLVKQAEKLGA 108 (306)
T ss_dssp HHHHHTTCCEEEES-SGGGTGGGCCHHHHHHHHHHHHHHHT-TSSCEEEE---------CCCSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEeC-ccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEc---------CCCccHHHHHHHHHHHHhcCC
Confidence 344444 8999984 111 112222333333334443332 24788864 23334455 444556677899
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHHHhh
Q 008319 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (570)
Q Consensus 401 D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE 430 (570)
|++|+..=--...-+-+.++....|+..+.
T Consensus 109 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 138 (306)
T 1o5k_A 109 NGVLVVTPYYNKPTQEGLYQHYKYISERTD 138 (306)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHTTCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 999986432223335677888888876554
No 383
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=30.14 E-value=1.1e+02 Score=31.19 Aligned_cols=45 Identities=18% Similarity=0.288 Sum_probs=34.5
Q ss_pred HHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCCcEEEEeec
Q 008319 117 IWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (570)
Q Consensus 117 l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl 165 (570)
.+++.++|.+.+.+++.|++.+.-.+.++.+|++. + ..+.|++|.
T Consensus 148 a~~~~~~Gf~~iKik~g~~~~~~d~~~v~avr~a~---g-~~~~l~vDa 192 (366)
T 1tkk_A 148 AENYLKQGFQTLKIKVGKDDIATDIARIQEIRKRV---G-SAVKLRLDA 192 (366)
T ss_dssp HHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHHH---C-SSSEEEEEC
T ss_pred HHHHHHcCCCeEEEEeCCCCHHHHHHHHHHHHHHh---C-CCCeEEEEC
Confidence 45678899999999999988877777888887753 3 345677774
No 384
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=29.87 E-value=3.8e+02 Score=25.69 Aligned_cols=124 Identities=15% Similarity=0.095 Sum_probs=67.4
Q ss_pred HHhhhhhhcCCcEEE--ecCCC--ChhHHHHHHHHHHhcCCCceEEEeecCcc-----------hhhhHHHHHHh--CCE
Q 008319 271 EDIKFGVDNQVDFYA--VSFVK--DAKVVHELKDYLKSCNADIHVIVKIESAD-----------SIPNLHSIISA--SDG 333 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~--~SfV~--sa~dv~~vr~~l~~~~~~i~IiaKIEt~~-----------gv~NldeIl~~--sDg 333 (570)
+.++.+.+.|+|.|= +=|.. +.+++.+.-..+.+.-.++++|.-+-|.. -++-+...++. +|.
T Consensus 21 ~~~~~~~~~~~D~vElRvD~l~~~~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~~~~d~ 100 (238)
T 1sfl_A 21 IQKINHRIDAIDVLELRIDQFENVTVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTNDSYLNLISDLANINGIDM 100 (238)
T ss_dssp HHHHHHTTTTCSEEEEECTTSTTCCHHHHHHHHHHHC---CCSEEEEECCBGGGTSCBCCCHHHHHHHHHHGGGCTTCCE
T ss_pred HHHHHhhhcCCCEEEEEecccccCCHHHHHHHHHHHHHhccCCCEEEEeeccccCCCCCCCHHHHHHHHHHHHHhCCCCE
Confidence 434444556777652 22222 34555444344433323578888775442 12223444432 455
Q ss_pred EEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhH-HHHHHHhCccEEEec
Q 008319 334 AMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSD-IAIAVREGADAVMLS 406 (570)
Q Consensus 334 ImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~D-v~nav~~G~D~vmLs 406 (570)
|=| |+....-....+++++.+++.|..+|.+-+ -+..+|+..|+.. ...+...|+|.+=+.
T Consensus 101 iDv-------El~~~~~~~~~~~l~~~~~~~~~kvI~S~H-----df~~tp~~~el~~~~~~~~~~gaDivKia 162 (238)
T 1sfl_A 101 IDI-------EWQADIDIEKHQRIITHLQQYNKEVIISHH-----NFESTPPLDELQFIFFKMQKFNPEYVKLA 162 (238)
T ss_dssp EEE-------ECCTTSCHHHHHHHHHHHHHTTCEEEEEEE-----ESSCCCCHHHHHHHHHHHHTTCCSEEEEE
T ss_pred EEE-------EccCCCChHHHHHHHHHHHhcCCEEEEEec-----CCCCCcCHHHHHHHHHHHHHcCCCEEEEE
Confidence 444 333211225667889999999999998733 2245777777544 455667888877653
No 385
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=29.81 E-value=1.7e+02 Score=29.01 Aligned_cols=51 Identities=16% Similarity=0.325 Sum_probs=39.5
Q ss_pred HHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHH
Q 008319 354 QEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 424 (570)
Q Consensus 354 qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~ 424 (570)
-+..++.|+++|++|.+=|- + +..+...++..|+|+|+- +||-.+.+++.+
T Consensus 257 ~~~~v~~~~~~Gl~V~~WTV--n-----------~~~~~~~l~~~GVDgIiT-------D~P~~~~~~l~~ 307 (313)
T 3l12_A 257 TPELVAEAHDLGLIVLTWTV--N-----------EPEDIRRMATTGVDGIVT-------DYPGRTQRILID 307 (313)
T ss_dssp CHHHHHHHHHTTCEEEEBCC--C-----------SHHHHHHHHHHTCSEEEE-------SCHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEEEEcC--C-----------CHHHHHHHHHcCCCEEEe-------CCHHHHHHHHHh
Confidence 36889999999999998651 1 123566788999999986 799888887653
No 386
>2jpp_A Translational repressor; RNA recognition, protein/RNA, CSRA, RSMA, shine-dalgarno; NMR {Pseudomonas fluorescens}
Probab=29.65 E-value=74 Score=25.54 Aligned_cols=30 Identities=10% Similarity=0.206 Sum_probs=24.9
Q ss_pred cccCCEEEEeCCeeEEEEEEEeCCeEEEEEE
Q 008319 212 VEVGDILLVDGGMMSLAVKSKTKDLVKCIVV 242 (570)
Q Consensus 212 v~~Gd~I~iDDG~i~l~V~~~~~~~i~~~v~ 242 (570)
-++|+.|.|.| .|..+|.++.++.|..-+.
T Consensus 6 Rk~GEsI~IGd-~I~ItVl~v~g~~VrLGI~ 35 (70)
T 2jpp_A 6 RKVGESINIGD-DITITILGVSGQQVRIGIN 35 (70)
T ss_dssp EETTCEEEETT-TEEEEEEEEETTEEEEEEE
T ss_pred ccCCCeEEECC-CEEEEEEEEeCCEEEEEEE
Confidence 37899999987 7999999999988876544
No 387
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=29.64 E-value=94 Score=31.11 Aligned_cols=68 Identities=24% Similarity=0.306 Sum_probs=49.7
Q ss_pred CceEEEecCCCCC---------CHH----HHHHHHHhCCcEEEEec-CC--C-----ChHHHHHHHHHHHHHHhhcCCCc
Q 008319 100 KTKIVCTIGPSTS---------SRE----MIWKLAEEGMNVARLNM-SH--G-----DHASHQKTIDLVKEYNSQFEDKA 158 (570)
Q Consensus 100 ~tKIi~TiGPs~~---------~~e----~l~~li~~Gm~v~RiN~-sH--g-----~~e~~~~~i~~ir~~~~~~~~~~ 158 (570)
+++|++=|.+.-+ +.+ ..++|+++|+++.=+|. |- | ..|++.+++..++...++.+
T Consensus 14 ~~~imGilN~TpdSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~--- 90 (282)
T 1aj0_A 14 HPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFE--- 90 (282)
T ss_dssp SCEEEEEEECCTTTSCCCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCC---
T ss_pred CCEEEEEEeCCCCccccccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcC---
Confidence 5788887765431 223 35779999999999998 42 2 15888888888888876654
Q ss_pred EEEEeecCCCee
Q 008319 159 VAIMLDTKGPEV 170 (570)
Q Consensus 159 i~I~~Dl~Gpki 170 (570)
+.|.+|+.-|++
T Consensus 91 ~piSIDT~~~~v 102 (282)
T 1aj0_A 91 VWISVDTSKPEV 102 (282)
T ss_dssp CEEEEECCCHHH
T ss_pred CeEEEeCCCHHH
Confidence 568889888765
No 388
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=29.42 E-value=3.1e+02 Score=27.45 Aligned_cols=87 Identities=8% Similarity=0.135 Sum_probs=55.6
Q ss_pred HHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHhCCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccc
Q 008319 295 VHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNM 374 (570)
Q Consensus 295 v~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqm 374 (570)
++.++++.++. .+.++.-+-.+..++-+.+ .+|.+-||-+++- ..+ +++.+.+.||||++.|.|
T Consensus 78 l~~l~~~~~~~--Glp~~te~~d~~~~~~l~~---~vd~~kIgA~~~~------n~~-----Ll~~~a~~~kPV~lk~G~ 141 (292)
T 1o60_A 78 LKIFQELKDTF--GVKIITDVHEIYQCQPVAD---VVDIIQLPAFLAR------QTD-----LVEAMAKTGAVINVKKPQ 141 (292)
T ss_dssp HHHHHHHHHHH--CCEEEEECCSGGGHHHHHT---TCSEEEECGGGTT------CHH-----HHHHHHHTTCEEEEECCT
T ss_pred HHHHHHHHHHc--CCcEEEecCCHHHHHHHHh---cCCEEEECccccc------CHH-----HHHHHHcCCCcEEEeCCC
Confidence 44556665443 5778887777777666554 5899999976663 233 566666889999986554
Q ss_pred hhhhhcCCCcChHHHhHHHHHHH-hCccEEEe
Q 008319 375 LESMIDHPTPTRAEVSDIAIAVR-EGADAVML 405 (570)
Q Consensus 375 LeSM~~~~~PtrAEv~Dv~nav~-~G~D~vmL 405 (570)
- -|..|+...+..+. .|.+-++|
T Consensus 142 ~--------~t~~ei~~Av~~i~~~Gn~~i~L 165 (292)
T 1o60_A 142 F--------LSPSQMGNIVEKIEECGNDKIIL 165 (292)
T ss_dssp T--------SCGGGHHHHHHHHHHTTCCCEEE
T ss_pred C--------CCHHHHHHHHHHHHHcCCCeEEE
Confidence 3 24457666666654 46643333
No 389
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=29.39 E-value=1.2e+02 Score=28.72 Aligned_cols=68 Identities=12% Similarity=0.149 Sum_probs=46.4
Q ss_pred hHHHhhhhhhcCCcEEEecCC-CChhHH--HHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh--CCEEEEc
Q 008319 269 DWEDIKFGVDNQVDFYAVSFV-KDAKVV--HELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--SDGAMVA 337 (570)
Q Consensus 269 D~~dI~~~~~~gvd~I~~SfV-~sa~dv--~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~--sDgImIg 337 (570)
+.+|++.+.+.|+|++++-|. .|+..| .+++++.......+..+.=.-+. ..+.+.+|++. .|.|-+-
T Consensus 11 ~~eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~-~~~~i~~~~~~~~ld~vQLH 83 (205)
T 1nsj_A 11 NLEDALFSVESGADAVGFVFYPKSKRYISPEDARRISVELPPFVFRVGVFVNE-EPEKILDVASYVQLNAVQLH 83 (205)
T ss_dssp SHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSC-CHHHHHHHHHHHTCSEEEEC
T ss_pred cHHHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCC-CHHHHHHHHHhhCCCEEEEC
Confidence 567888899999999988875 566655 45666665554455544444343 45677777765 7899884
No 390
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A*
Probab=29.32 E-value=61 Score=33.08 Aligned_cols=57 Identities=12% Similarity=0.233 Sum_probs=34.6
Q ss_pred CCHHHHHHHHHhCCcEEEEecCCCC---h----HHHHHHHHHHHHHHhhcCCCcEEEEeecCCC
Q 008319 112 SSREMIWKLAEEGMNVARLNMSHGD---H----ASHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (570)
Q Consensus 112 ~~~e~l~~li~~Gm~v~RiN~sHg~---~----e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~Gp 168 (570)
.+.+.++.|-+.|+|++||-++... + ..-.+.++.++++......+-+.+++|+-..
T Consensus 70 ~~~~d~~~l~~~G~n~vRl~i~w~~~~~~~~~~~~~~~~l~~~d~~v~~a~~~Gi~vild~h~~ 133 (395)
T 2jep_A 70 VTPELIKKVKAAGFKSIRIPVSYLNNIGSAPNYTINAAWLNRIQQVVDYAYNEGLYVIINIHGD 133 (395)
T ss_dssp CCHHHHHHHHHTTCCEEEECCCCGGGBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEECCCGG
T ss_pred CcHHHHHHHHHcCCCEEEEeeeeccccCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEECCCc
Confidence 4688999999999999999876421 1 0001233333333322222457788897754
No 391
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=29.23 E-value=2.1e+02 Score=26.98 Aligned_cols=42 Identities=14% Similarity=0.021 Sum_probs=30.5
Q ss_pred HHhhhhhhcCCcEEEecCCCC-h---hHHHHHHHHHHhcCCCceEE
Q 008319 271 EDIKFGVDNQVDFYAVSFVKD-A---KVVHELKDYLKSCNADIHVI 312 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~s-a---~dv~~vr~~l~~~~~~i~Ii 312 (570)
+.++.+.+.|+|+|-+..-.. . .++.++++.+++.|-.+...
T Consensus 21 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~ 66 (290)
T 2qul_A 21 ATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMCC 66 (290)
T ss_dssp HHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEEe
Confidence 456777889999998875432 2 67888999998887665443
No 392
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=29.22 E-value=3.7e+02 Score=26.07 Aligned_cols=104 Identities=18% Similarity=0.167 Sum_probs=62.1
Q ss_pred cEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcch----hhhHHHHHHhCCEEEEcCCCcccCCCCCCHHHHHHHH
Q 008319 282 DFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADS----IPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDI 357 (570)
Q Consensus 282 d~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~g----v~NldeIl~~sDgImIgrGDLg~eig~~~v~~~qk~I 357 (570)
..+..|| +.+.+..+++. ..++.+..-++.... -..+..+...++++-+.- ..+-...
T Consensus 172 ~vii~SF--~~~~l~~~~~~----~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~------------~~~~~~~ 233 (287)
T 2oog_A 172 HVMIQSF--SDESLKKIHRQ----NKHVPLVKLVDKGELQQFNDQRLKEIRSYAIGLGPDY------------TDLTEQN 233 (287)
T ss_dssp SEEEEES--CHHHHHHHHHH----CTTSCEEEEECTTTGGGCCHHHHHHHHTTCSEEEEBG------------GGCCHHH
T ss_pred CEEEEeC--CHHHHHHHHHh----CCCCcEEEEecCCcccccCHHHHHHHhhhheEEcccH------------hhcCHHH
Confidence 4677788 55556555543 345555444443211 123344443456654321 1123578
Q ss_pred HHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHH
Q 008319 358 IRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 423 (570)
Q Consensus 358 i~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~ 423 (570)
++.++++|++|.+-|- -+..+...++..|+|+|+- .||..+.+++.
T Consensus 234 v~~~~~~G~~v~~wTv-------------n~~~~~~~l~~~GVdgIiT-------D~P~~~~~~~~ 279 (287)
T 2oog_A 234 THHLKDLGFIVHPYTV-------------NEKADMLRLNKYGVDGVFT-------NFADKYKEVIK 279 (287)
T ss_dssp HHHHHHTTCEECCBCC-------------CSHHHHHHHHHHTCSEEEE-------SCHHHHHHHHH
T ss_pred HHHHHHCCCeEEEEeC-------------CCHHHHHHHHHcCCCEEEe-------CCHHHHHHHHh
Confidence 8999999999997652 1123566788999999976 68987766653
No 393
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=29.19 E-value=2.2e+02 Score=28.57 Aligned_cols=121 Identities=18% Similarity=0.212 Sum_probs=68.9
Q ss_pred hhhhhcCCcEEEec---------CCC-----ChhHHHHHHHHHHhcCCCceEEEee--cCcchhhhHHHHHHh-CCEEEE
Q 008319 274 KFGVDNQVDFYAVS---------FVK-----DAKVVHELKDYLKSCNADIHVIVKI--ESADSIPNLHSIISA-SDGAMV 336 (570)
Q Consensus 274 ~~~~~~gvd~I~~S---------fV~-----sa~dv~~vr~~l~~~~~~i~IiaKI--Et~~gv~NldeIl~~-sDgImI 336 (570)
+..-+.|++.|.+= |-. +.++++++++. -++++++|. -. ++..+.+.+. +|+|
T Consensus 35 ~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~-----v~iPvl~k~~i~~---ide~qil~aaGAD~I-- 104 (297)
T 4adt_A 35 KIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKC-----ISINVLAKVRIGH---FVEAQILEELKVDML-- 104 (297)
T ss_dssp HHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTT-----CCSEEEEEEETTC---HHHHHHHHHTTCSEE--
T ss_pred HHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHh-----cCCCEEEeccCCc---HHHHHHHHHcCCCEE--
Confidence 44456788875332 222 66666666643 368899873 33 4444444444 8998
Q ss_pred cCCCcccCCCCCCHHHHHHHHHHHHHH--cCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCC
Q 008319 337 ARGDLGAELPIEDVPLLQEDIIRRCRS--MQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKF 414 (570)
Q Consensus 337 grGDLg~eig~~~v~~~qk~Ii~~c~~--~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~y 414 (570)
|.+..+..++ ++..+++ .|.++++- ..+..| .-.++..|+|.|-..++-..| .
T Consensus 105 ---d~s~~~~~~~-------li~~i~~~~~g~~vvv~-----------v~~~~E---a~~a~~~Gad~I~v~g~~gTG-~ 159 (297)
T 4adt_A 105 ---DESEVLTMAD-------EYNHINKHKFKTPFVCG-----------CTNLGE---ALRRISEGASMIRTKGEAGTG-N 159 (297)
T ss_dssp ---EEETTSCCSC-------SSCCCCGGGCSSCEEEE-----------ESSHHH---HHHHHHHTCSEEEECCCTTSC-C
T ss_pred ---EcCCCCCHHH-------HHHHHHhcCCCCeEEEE-----------eCCHHH---HHHHHhCCCCEEEECCCcCCC-c
Confidence 2222122222 2233333 57777652 123333 456778999999988762222 3
Q ss_pred HHHHHHHHHHHHHHh
Q 008319 415 PLKAVKVMHTVALRT 429 (570)
Q Consensus 415 P~eaV~~m~~I~~~a 429 (570)
-+++|+++..+-.+.
T Consensus 160 ~~~~v~h~~~~~~ei 174 (297)
T 4adt_A 160 IIEAIKHIRTVNNEI 174 (297)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhhhhh
Confidence 489999998875333
No 394
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=28.97 E-value=1.6e+02 Score=29.17 Aligned_cols=91 Identities=12% Similarity=0.133 Sum_probs=52.4
Q ss_pred HHHHHh-CCEEEEcCCCcc--cCCCCCCHHHHHHHHHHHHHHc---CCCEEEEccchhhhhcCCCcChHH-HhHHHHHHH
Q 008319 325 HSIISA-SDGAMVARGDLG--AELPIEDVPLLQEDIIRRCRSM---QKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVR 397 (570)
Q Consensus 325 deIl~~-sDgImIgrGDLg--~eig~~~v~~~qk~Ii~~c~~~---gKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~ 397 (570)
+-.++. +||+++. |=-| ..+..+ -.+++++.+.++ ..||+.-| ...+-.| +.-.-.|-.
T Consensus 31 ~~li~~Gv~gl~~~-GttGE~~~Ls~~----Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~ai~la~~A~~ 96 (294)
T 3b4u_A 31 RRCLSNGCDSVTLF-GTTGEGCSVGSR----ERQAILSSFIAAGIAPSRIVTGV---------LVDSIEDAADQSAEALN 96 (294)
T ss_dssp HHHHHTTCSEEEES-STTTTGGGSCHH----HHHHHHHHHHHTTCCGGGEEEEE---------CCSSHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHH----HHHHHHHHHHHHhCCCCcEEEeC---------CCccHHHHHHHHHHHHh
Confidence 344444 8999984 1111 112222 334555555543 36887642 2333445 444556677
Q ss_pred hCccEEEecccccCC-CCHHHHHHHHHHHHHHh
Q 008319 398 EGADAVMLSGETAHG-KFPLKAVKVMHTVALRT 429 (570)
Q Consensus 398 ~G~D~vmLs~ETA~G-~yP~eaV~~m~~I~~~a 429 (570)
.|+|++|+..=--.. .-+-+.++....|+..+
T Consensus 97 ~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~ 129 (294)
T 3b4u_A 97 AGARNILLAPPSYFKNVSDDGLFAWFSAVFSKI 129 (294)
T ss_dssp TTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhc
Confidence 899999997433223 24577889999999887
No 395
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=28.64 E-value=1.7e+02 Score=30.36 Aligned_cols=63 Identities=14% Similarity=0.215 Sum_probs=42.1
Q ss_pred CceEEEec-CCCCCCHHHH-----HHHHHhCCcEEEEecCCC------ChHHHHHHHHHHHHHHhhcCCCcEEEEeecC
Q 008319 100 KTKIVCTI-GPSTSSREMI-----WKLAEEGMNVARLNMSHG------DHASHQKTIDLVKEYNSQFEDKAVAIMLDTK 166 (570)
Q Consensus 100 ~tKIi~Ti-GPs~~~~e~l-----~~li~~Gm~v~RiN~sHg------~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~ 166 (570)
+....+|+ |.-..++|.+ +++++.|.+.+.+..... +.++-.+.++.+|++ ++ ..+.|++|..
T Consensus 125 ~v~~y~s~~g~~~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a---~g-~~~~l~vDaN 199 (393)
T 4dwd_A 125 RLPCYSSIGGNAARSVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVREL---LG-PDAVIGFDAN 199 (393)
T ss_dssp EEEEEEEECCCSSSCHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHH---HC-TTCCEEEECT
T ss_pred ceeeEEecCccCCCCHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHH---hC-CCCeEEEECC
Confidence 56677887 4434456554 666788999999999654 566666667767664 34 4456777744
No 396
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=28.61 E-value=1.7e+02 Score=28.75 Aligned_cols=140 Identities=15% Similarity=0.119 Sum_probs=71.8
Q ss_pred HHHhhhhhhcCCcEEEecCCCChhH-HHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEEcCCCcccC---
Q 008319 270 WEDIKFGVDNQVDFYAVSFVKDAKV-VHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAE--- 344 (570)
Q Consensus 270 ~~dI~~~~~~gvd~I~~SfV~sa~d-v~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrGDLg~e--- 344 (570)
.+.++.+.+.|+|+|-.+|+.+..+ ++.+++ .+.++.+++.+.|++-... ..+. +|.|.+- |.=+..
T Consensus 90 ~~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~----~~~~i~l~~~v~~~~~~~~---a~~~Gad~I~v~-G~~~~g~~~ 161 (297)
T 2zbt_A 90 FVEAMILEAIGVDFIDESEVLTPADEEHHIDK----WKFKVPFVCGARNLGEALR---RIAEGAAMIRTK-GEAGTGNVV 161 (297)
T ss_dssp HHHHHHHHHTTCSEEEEETTSCCSCSSCCCCG----GGCSSCEEEEESSHHHHHH---HHHTTCSEEEEC-CCSSSCCTH
T ss_pred HHHHHHHHHCCCCEEeeeCCCChHHHHHHHHH----hCCCceEEeecCCHHHHHH---HHHcCCCEEEEc-ccccCcchH
Confidence 4556667789999997777544322 222222 1235777777666543322 2223 7777552 210000
Q ss_pred ------------------CCCCC-------HHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhC
Q 008319 345 ------------------LPIED-------VPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREG 399 (570)
Q Consensus 345 ------------------ig~~~-------v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G 399 (570)
+.... .+...+.+-+.+...+.|+++. .....-+. .|+..+...|
T Consensus 162 e~~~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi~~-------a~GGI~~~---e~i~~~~~aG 231 (297)
T 2zbt_A 162 EAVRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHGRLPVVNF-------AAGGIATP---ADAALMMHLG 231 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHSSCSSCEE-------BCSSCCSH---HHHHHHHHTT
T ss_pred HHHhhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHHhcCCCcEEE-------eeCCCCCH---HHHHHHHHcC
Confidence 00000 0000112222233457787510 12233233 4677778889
Q ss_pred ccEEEecccccCCCCHHHHHHHHHHHHH
Q 008319 400 ADAVMLSGETAHGKFPLKAVKVMHTVAL 427 (570)
Q Consensus 400 ~D~vmLs~ETA~G~yP~eaV~~m~~I~~ 427 (570)
+|++++..---....|.++++.+.+.+.
T Consensus 232 adgvvvGsai~~~~dp~~~~~~l~~~i~ 259 (297)
T 2zbt_A 232 MDGVFVGSGIFKSGDPRKRARAIVRAVA 259 (297)
T ss_dssp CSEEEECGGGGGSSCHHHHHHHHHHHHH
T ss_pred CCEEEEchHHhCCCCHHHHHHHHHHHHH
Confidence 9999986432223468888888877664
No 397
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=28.54 E-value=1.7e+02 Score=28.93 Aligned_cols=159 Identities=11% Similarity=0.022 Sum_probs=78.5
Q ss_pred HHHHHh-CCEEEEcCCCc--ccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHH-HhHHHHHHHhCc
Q 008319 325 HSIISA-SDGAMVARGDL--GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (570)
Q Consensus 325 deIl~~-sDgImIgrGDL--g~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~ 400 (570)
+-.++. +||+++. |=- +..+..++-..+.+.+++.++ -..||+.- ....+-+| +.-.-.|-..|+
T Consensus 28 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaG---------vg~~~t~~ai~la~~A~~~Ga 96 (292)
T 2vc6_A 28 EWQIEEGSFGLVPC-GTTGESPTLSKSEHEQVVEITIKTAN-GRVPVIAG---------AGSNSTAEAIAFVRHAQNAGA 96 (292)
T ss_dssp HHHHHTTCSEEETT-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCBEEE---------CCCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEe---------cCCccHHHHHHHHHHHHHcCC
Confidence 444444 8999873 111 112222333333334443332 24788864 23334455 444556777899
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCcccCCCCC-hhHHHHHHHHHHHhhcCCcEEE--EcC--C
Q 008319 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFSAHKSH-MGDMFAFHSTTMANTLNTPIIV--FTR--T 475 (570)
Q Consensus 401 D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~-~~~~ia~~av~~a~~~~a~Iiv--~T~--s 475 (570)
|++|+..=--...-+-+.++....|+..+.--+. +|+...+. ..+ ..+.+ .++|++.. .|+- .|. -
T Consensus 97 davlv~~P~y~~~s~~~l~~~f~~ia~a~~lPii---lYn~P~~t-g~~l~~~~~----~~La~~~p-nIvgiK~s~gd~ 167 (292)
T 2vc6_A 97 DGVLIVSPYYNKPTQEGIYQHFKAIDAASTIPII---VYNIPGRS-AIEIHVETL----ARIFEDCP-NVKGVXDATGNL 167 (292)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEE---EEECHHHH-SCCCCHHHH----HHHHHHCT-TEEEEEECSCCT
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEE---EEeCcccc-CcCCCHHHH----HHHHhhCC-CEEEEecCCCCH
Confidence 9999864332223357788889999877653211 11110000 011 12333 34554233 2322 322 2
Q ss_pred hHHHHHHHhcCCCCeEEEEeCCHHHHHHh
Q 008319 476 GSMAVILSHYRPSSTIFAFTNQERIKQRL 504 (570)
Q Consensus 476 G~tA~~ls~~RP~~pIiavt~~~~taRrL 504 (570)
.+.++.+...++...|+.-. +..+...|
T Consensus 168 ~~~~~~~~~~~~~f~v~~G~-d~~~~~~l 195 (292)
T 2vc6_A 168 LRPSLERMACGEDFNLLTGE-DGTALGYM 195 (292)
T ss_dssp HHHHHHHHHSCTTSEEEESC-GGGHHHHH
T ss_pred HHHHHHHHHcCCCEEEEECc-hHHHHHHH
Confidence 34666666666677776543 44444443
No 398
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=28.46 E-value=90 Score=30.31 Aligned_cols=62 Identities=16% Similarity=0.233 Sum_probs=45.5
Q ss_pred hhhhhcCCcEEEecCCCChhH--------HHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh----CCEEEEcCCCc
Q 008319 274 KFGVDNQVDFYAVSFVKDAKV--------VHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVARGDL 341 (570)
Q Consensus 274 ~~~~~~gvd~I~~SfV~sa~d--------v~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~----sDgImIgrGDL 341 (570)
..|.+.|+++| .|||.+-+| +.++.++++..+.++.|++ .+++|..+|.++ +|.+-+.+.-|
T Consensus 119 ~~Aa~AGa~yI-SPfvgRi~d~g~dG~~~v~~i~~~~~~~~~~T~Ila-----AS~Rn~~~v~~aa~~G~d~~Tip~~vl 192 (223)
T 3s1x_A 119 LLAAKAGVTYV-SPFVGRLDDIGEDGMQIIDMIRTIFNNYIIKTQILV-----ASIRNPIHVLRSAVIGADVVTVPFNVL 192 (223)
T ss_dssp HHHHHTTCSEE-EEBSHHHHHTTSCTHHHHHHHHHHHHHTTCCSEEEE-----BSCCSHHHHHHHHHHTCSEEEECHHHH
T ss_pred HHHHHcCCeEE-EeecchHhhcCCCHHHHHHHHHHHHHHcCCCCEEEE-----EeCCCHHHHHHHHHcCCCEEEeCHHHH
Confidence 34667899987 578877655 4566778888788888888 678888888863 78877765443
No 399
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=28.40 E-value=94 Score=31.40 Aligned_cols=63 Identities=14% Similarity=0.196 Sum_probs=52.1
Q ss_pred hhhHHHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHH
Q 008319 267 DKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS 329 (570)
Q Consensus 267 ~kD~~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~ 329 (570)
+.|.+.++.-++.|+||+.--++-+.+.+..+.+.++..|-+++|++=|==.....++.-+.+
T Consensus 160 ~~d~~~Lk~Kv~aGAdf~iTQ~ffD~~~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~~~~~~ 222 (310)
T 3apt_A 160 EADLRHFKAKVEAGLDFAITQLFFNNAHYFGFLERARRAGIGIPILPGIMPVTSYRQLRRFTE 222 (310)
T ss_dssp HHHHHHHHHHHHHHCSEEEECCCSCHHHHHHHHHHHHHTTCCSCEECEECCCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHHcCCCCeEEEEecccCCHHHHHHHHH
Confidence 357788888889999999999999999999999999988888999997765556666666654
No 400
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=28.39 E-value=87 Score=31.71 Aligned_cols=65 Identities=6% Similarity=-0.029 Sum_probs=0.0
Q ss_pred hHHHhhhhhhcCCcEEEec----------------------CCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHH
Q 008319 269 DWEDIKFGVDNQVDFYAVS----------------------FVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHS 326 (570)
Q Consensus 269 D~~dI~~~~~~gvd~I~~S----------------------fV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~Nlde 326 (570)
+.++++.+.+.|+|+|.++ .-........+++..+.. .++.||+ --||.+-++
T Consensus 191 ~~~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~-~~ipvia----~GGI~~~~d 265 (349)
T 1p0k_A 191 SKASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEF-PASTMIA----SGGLQDALD 265 (349)
T ss_dssp CHHHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHC-TTSEEEE----ESSCCSHHH
T ss_pred CHHHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhc-CCCeEEE----ECCCCCHHH
Q ss_pred HHHh----CCEEEEcC
Q 008319 327 IISA----SDGAMVAR 338 (570)
Q Consensus 327 Il~~----sDgImIgr 338 (570)
+.+. +|+++|||
T Consensus 266 ~~k~l~~GAd~V~iG~ 281 (349)
T 1p0k_A 266 VAKAIALGASCTGMAG 281 (349)
T ss_dssp HHHHHHTTCSEEEECH
T ss_pred HHHHHHcCCCEEEEcH
No 401
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=28.37 E-value=1.7e+02 Score=30.50 Aligned_cols=94 Identities=13% Similarity=0.104 Sum_probs=48.0
Q ss_pred hhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEEcCCCcc--cCCCCCCHHHHHHHHHHHHHHcCCCE
Q 008319 292 AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLG--AELPIEDVPLLQEDIIRRCRSMQKPV 368 (570)
Q Consensus 292 a~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrGDLg--~eig~~~v~~~qk~Ii~~c~~~gKPv 368 (570)
.+++..+++.. +.+++.|.= ...+......+. +|+|.|.- --| ...+.+.+ ....++.+... -..||
T Consensus 241 ~~~i~~lr~~~-----~~PvivKgv--~~~e~A~~a~~aGad~I~vs~-~ggr~~~~g~~~~-~~l~~v~~av~-~~ipV 310 (392)
T 2nzl_A 241 WEDIKWLRRLT-----SLPIVAKGI--LRGDDAREAVKHGLNGILVSN-HGARQLDGVPATI-DVLPEIVEAVE-GKVEV 310 (392)
T ss_dssp HHHHHHHC--C-----CSCEEEEEE--CCHHHHHHHHHTTCCEEEECC-GGGTSSTTCCCHH-HHHHHHHHHHT-TSSEE
T ss_pred HHHHHHHHHhh-----CCCEEEEec--CCHHHHHHHHHcCCCEEEeCC-CCCCcCCCCcChH-HHHHHHHHHcC-CCCEE
Confidence 45555555432 466777721 223333444444 88988831 111 11222222 22233333221 24788
Q ss_pred EEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecc
Q 008319 369 IVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (570)
Q Consensus 369 ivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (570)
|.. ...-+ -.|+..++..|+|++++..
T Consensus 311 ia~---------GGI~~---g~Dv~kalalGAd~V~iGr 337 (392)
T 2nzl_A 311 FLD---------GGVRK---GTDVLKALALGAKAVFVGR 337 (392)
T ss_dssp EEC---------SSCCS---HHHHHHHHHTTCSEEEECH
T ss_pred EEE---------CCCCC---HHHHHHHHHhCCCeeEECH
Confidence 853 22222 4588999999999999864
No 402
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=28.36 E-value=1.3e+02 Score=28.52 Aligned_cols=68 Identities=4% Similarity=-0.037 Sum_probs=46.3
Q ss_pred hHHHhhhhhhcCCcEEEecCC-CChhHH--HHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh--CCEEEEc
Q 008319 269 DWEDIKFGVDNQVDFYAVSFV-KDAKVV--HELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--SDGAMVA 337 (570)
Q Consensus 269 D~~dI~~~~~~gvd~I~~SfV-~sa~dv--~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~--sDgImIg 337 (570)
+.+|+..+.+.|+|++++-|. .|+..| .+++++.......+..+.=.-+. ..+.+.+|++. .|.|-+-
T Consensus 10 ~~eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~-~~~~i~~~~~~~~ld~vQLH 82 (203)
T 1v5x_A 10 RLEDALLAEALGAFALGFVLAPGSRRRIAPEAARAIGEALGPFVVRVGVFRDQ-PPEEVLRLMEEARLQVAQLH 82 (203)
T ss_dssp CHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSC-CHHHHHHHHHHTTCSEEEEC
T ss_pred cHHHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCC-CHHHHHHHHHhhCCCEEEEC
Confidence 567888889999999988875 566655 45666665554455544444343 46677777765 7899884
No 403
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=28.33 E-value=93 Score=31.34 Aligned_cols=63 Identities=14% Similarity=0.151 Sum_probs=46.4
Q ss_pred HHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEE--eecCcchhhhHHHHHHh-CCEEEEcC
Q 008319 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIV--KIESADSIPNLHSIISA-SDGAMVAR 338 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~Iia--KIEt~~gv~NldeIl~~-sDgImIgr 338 (570)
+.++.+++.|+|+|.+.-. +.+++.++.+.+.....+++|.| -| -.+|+.++++. +|+|-+|.
T Consensus 208 ee~~~A~~aGaD~I~ld~~-~~~~l~~~v~~l~~~~~~~~I~ASGGI----t~~ni~~~~~aGaD~i~vGs 273 (299)
T 2jbm_A 208 QEAVQAAEAGADLVLLDNF-KPEELHPTATVLKAQFPSVAVEASGGI----TLDNLPQFCGPHIDVISMGM 273 (299)
T ss_dssp HHHHHHHHTTCSEEEEESC-CHHHHHHHHHHHHHHCTTSEEEEESSC----CTTTHHHHCCTTCCEEECTH
T ss_pred HHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCeeEEEECCC----CHHHHHHHHHCCCCEEEECh
Confidence 4566777899999999864 68888887777765445566555 23 24688888877 99998874
No 404
>4e8b_A Ribosomal RNA small subunit methyltransferase E; 16S rRNA methyltransferase; 2.25A {Escherichia coli}
Probab=28.21 E-value=1.2e+02 Score=29.61 Aligned_cols=113 Identities=15% Similarity=0.213 Sum_probs=61.1
Q ss_pred ccccCCEEEEeCC---eeEEEEEEEeCCeEEEEEEeCcEeccCcccccCCCccCCCCCChhhHHHhhhhhhcCCcEEEec
Q 008319 211 DVEVGDILLVDGG---MMSLAVKSKTKDLVKCIVVDGGELKSRRHLNVRGKSANLPSITDKDWEDIKFGVDNQVDFYAVS 287 (570)
Q Consensus 211 ~v~~Gd~I~iDDG---~i~l~V~~~~~~~i~~~v~~gG~l~s~KgIn~p~~~~~lp~lt~kD~~dI~~~~~~gvd~I~~S 287 (570)
.+++||.|.+-|| ....+|.+++.+.+.+++...-.......+.+ -....+|. .++-..-|+.+.+.|++-|..=
T Consensus 33 R~~~Gd~v~l~dg~g~~~~a~I~~i~~~~~~~~i~~~~~~~~e~~~~v-~L~~al~K-~~r~e~ilqkatELGv~~I~p~ 110 (251)
T 4e8b_A 33 RMGPGQALQLFDGSNQVFDAEITSASKKSVEVKVLEGQIDDRESPLHI-HLGQVMSR-GEKMEFTIQKSIELGVSLITPL 110 (251)
T ss_dssp CCCSCCEEEEECSSSEEEEEEEEEECSSCEEEEEEEEEECCCCCSSEE-EEEEECCS-SSHHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCCCEEEEEeCCCcEEEEEEEEeecceEEEEEeeeecCCCCCCceE-EEEEEeec-hhHHHHHHHHHHhhCCCEEEEE
Confidence 4689999988765 35778889999998888764222111111110 00112222 2333355678999999987543
Q ss_pred CCCCh------h----HHHHHHH----HHHhcCCCceEEEeecCcchhhhHHHHHHh
Q 008319 288 FVKDA------K----VVHELKD----YLKSCNADIHVIVKIESADSIPNLHSIISA 330 (570)
Q Consensus 288 fV~sa------~----dv~~vr~----~l~~~~~~i~IiaKIEt~~gv~NldeIl~~ 330 (570)
+.+.. + .+..+++ ..++++.. .+.+|+.+. ++++.+..
T Consensus 111 ~t~rsv~~~~~~k~~~k~~Rw~~I~~eAaeQs~R~--~iP~v~~~~---~~~~~l~~ 162 (251)
T 4e8b_A 111 FSERCGVKLDSERLNKKLQQWQKIAIAACEQCGRN--RVPEIRPAM---DLEAWCAE 162 (251)
T ss_dssp ECTTCCCCCCHHHHHHHHHHHHHHHHHHHHHHTCS--SCCCBCCCE---EHHHHHHC
T ss_pred EeeeEEeecchhhhhhHHHHHHHHHHHHHHhcCCC--cCcEECCcC---CHHHHHhh
Confidence 33221 1 1223333 34444443 455665544 55666655
No 405
>3ijd_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: C2F; 2.00A {Clostridium thermocellum atcc 27405}
Probab=28.18 E-value=1e+02 Score=31.51 Aligned_cols=101 Identities=12% Similarity=0.162 Sum_probs=64.2
Q ss_pred hhHHHhhhhhhcCCcEEEecCCCChhHHHHHH----HHHHhcCC-CceEEEeecCcchhhhHHHHHHhCCEEEEc-----
Q 008319 268 KDWEDIKFGVDNQVDFYAVSFVKDAKVVHELK----DYLKSCNA-DIHVIVKIESADSIPNLHSIISASDGAMVA----- 337 (570)
Q Consensus 268 kD~~dI~~~~~~gvd~I~~SfV~sa~dv~~vr----~~l~~~~~-~i~IiaKIEt~~gv~NldeIl~~sDgImIg----- 337 (570)
.|.+.++.-++.|+||+.--++-+.+.+..+. +.+...|- +++|++=|==.....++.- +.. -|+-|.
T Consensus 166 ~d~~~Lk~KvdAGAdf~ITQ~ffD~e~~~~f~~~~~~~~r~~Gi~~vPIipGImPi~s~k~~~f-~~~-~G~~IP~~l~~ 243 (315)
T 3ijd_A 166 DEHLRIIDKINKGCKYFITQAVYNVEAAKDFLSDYYYYSKNNNLKMVPIIFTLTPCGSTKTLEF-MKW-LGISIPRWLEN 243 (315)
T ss_dssp CHHHHHHHHHHTTCCEEEESCCCCHHHHHHHHHHHHHHHHHTTBCCCCEEEEECCCCSHHHHHH-HHH-HTCCCCHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEccccCCHHHHHHHHHHHHHHHHHCCCCCCcEEEEeeecCCHHHHHH-Hhc-CCCCCCHHHHH
Confidence 57778888889999999999999999988877 44556677 7889887633333443321 111 111110
Q ss_pred ----CCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 338 ----RGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 338 ----rGDLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
-.| ..+.|++-....-++++..|...|.|+++-
T Consensus 244 ~l~~~~d-~~~~Gi~~a~e~~~~L~~~~~g~~~p~G~n 280 (315)
T 3ijd_A 244 DLMNCED-ILNKSVSLSKSIFNELMEFCLEKGIPIGCN 280 (315)
T ss_dssp HHHTTCC-CHHHHHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHhCCC-HHHHHHHHHHHHHHHHHHhcCcCCcCCCcc
Confidence 012 122333333344468888899999999974
No 406
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=28.08 E-value=1.4e+02 Score=29.41 Aligned_cols=124 Identities=18% Similarity=0.184 Sum_probs=65.5
Q ss_pred HHhhhhhhcCCcEEEec--------------CCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEE
Q 008319 271 EDIKFGVDNQVDFYAVS--------------FVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAM 335 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S--------------fV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgIm 335 (570)
+.++...+.|+++|-+. ..++.+.++++++ . .+++++.++-.. -.+.++...+. +|+|
T Consensus 32 ~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~~~~~~~i~~i~~---~--~~~Pvi~~~~~~-~~~~~~~~~~aGad~v- 104 (297)
T 2zbt_A 32 EQAVIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMA---A--VSIPVMAKVRIG-HFVEAMILEAIGVDFI- 104 (297)
T ss_dssp HHHHHHHHHTCSEEEECSSCHHHHHHTTCCCCCCCHHHHHHHHT---T--CSSCEEEEEETT-CHHHHHHHHHTTCSEE-
T ss_pred HHHHHHHHCCCcEEEeccccchHHHhhcCCccCCCHHHHHHHHH---h--cCCCeEEEeccC-CHHHHHHHHHCCCCEE-
Confidence 44555668899998551 1123333333332 2 245666544221 14556666655 8999
Q ss_pred EcCCCcccCCCCCCHHHHHHHHHHHHHH--cCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCC
Q 008319 336 VARGDLGAELPIEDVPLLQEDIIRRCRS--MQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGK 413 (570)
Q Consensus 336 IgrGDLg~eig~~~v~~~qk~Ii~~c~~--~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~ 413 (570)
|.......++ +++.+++ .+.+++.-+ -+..| ...+...|+|.+...+|...|
T Consensus 105 ----~~~~~~~~~~-------~~~~~~~~~~~i~l~~~v-----------~~~~~---~~~a~~~Gad~I~v~G~~~~g- 158 (297)
T 2zbt_A 105 ----DESEVLTPAD-------EEHHIDKWKFKVPFVCGA-----------RNLGE---ALRRIAEGAAMIRTKGEAGTG- 158 (297)
T ss_dssp ----EEETTSCCSC-------SSCCCCGGGCSSCEEEEE-----------SSHHH---HHHHHHTTCSEEEECCCSSSC-
T ss_pred ----eeeCCCChHH-------HHHHHHHhCCCceEEeec-----------CCHHH---HHHHHHcCCCEEEEcccccCc-
Confidence 2222222222 1222222 266666311 12222 445789999999999998888
Q ss_pred CHHHHHHHHHHHHH
Q 008319 414 FPLKAVKVMHTVAL 427 (570)
Q Consensus 414 yP~eaV~~m~~I~~ 427 (570)
-+.++..-++++..
T Consensus 159 ~~~e~~~~~~~~~~ 172 (297)
T 2zbt_A 159 NVVEAVRHARTMWK 172 (297)
T ss_dssp CTHHHHHHHHHHHH
T ss_pred chHHHHhhHHHHHH
Confidence 45566666555543
No 407
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=27.66 E-value=2.2e+02 Score=28.58 Aligned_cols=159 Identities=13% Similarity=0.055 Sum_probs=81.1
Q ss_pred HHHHHh-CCEEEEcCCCcc--cCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHH-HhHHHHHHHhCc
Q 008319 325 HSIISA-SDGAMVARGDLG--AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (570)
Q Consensus 325 deIl~~-sDgImIgrGDLg--~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~ 400 (570)
+..++. +|||++. |=-| ..+..++-..+.+..++.++ -..|||.- ....+-+| +.-.-.|-..|+
T Consensus 50 ~~li~~Gv~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~-grvpViaG---------vg~~st~~ai~la~~A~~~Ga 118 (315)
T 3si9_A 50 EWQITQGINGVSPV-GTTGESPTLTHEEHKRIIELCVEQVA-KRVPVVAG---------AGSNSTSEAVELAKHAEKAGA 118 (315)
T ss_dssp HHHHHTTCSEEECS-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSCBEEE---------CCCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEeC-ccccCccccCHHHHHHHHHHHHHHhC-CCCcEEEe---------CCCCCHHHHHHHHHHHHhcCC
Confidence 333444 8999874 1111 11222232333333333332 24788864 23334445 555567778899
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCcccCCCCCh-hHHHHHHHHHHHhhcCCcEEE--EcC--C
Q 008319 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFSAHKSHM-GDMFAFHSTTMANTLNTPIIV--FTR--T 475 (570)
Q Consensus 401 D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~-~~~ia~~av~~a~~~~a~Iiv--~T~--s 475 (570)
|++|+..=--...-+-+.++....|+..+.--+. +|+...+ ...++ .+.+ .+++++... |+- .|. -
T Consensus 119 davlv~~P~y~~~~~~~l~~~f~~va~a~~lPii---lYn~P~~-tg~~l~~~~~----~~La~~~pn-IvgiKdssgd~ 189 (315)
T 3si9_A 119 DAVLVVTPYYNRPNQRGLYTHFSSIAKAISIPII---IYNIPSR-SVIDMAVETM----RDLCRDFKN-IIGVKDATGKI 189 (315)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEE---EEECHHH-HSCCCCHHHH----HHHHHHCTT-EEEEEECSCCT
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHcCCCCEE---EEeCchh-hCCCCCHHHH----HHHHhhCCC-EEEEEeCCCCH
Confidence 9999864322233356789999999988753221 1111000 00111 2333 456654442 222 332 3
Q ss_pred hHHHHHHHhcCCCCeEEEEeCCHHHHHHh
Q 008319 476 GSMAVILSHYRPSSTIFAFTNQERIKQRL 504 (570)
Q Consensus 476 G~tA~~ls~~RP~~pIiavt~~~~taRrL 504 (570)
.+..+.+...+|...|+.-.. ..+...|
T Consensus 190 ~~~~~l~~~~~~~f~v~~G~d-~~~l~~l 217 (315)
T 3si9_A 190 ERASEQREKCGKDFVQLSGDD-CTALGFN 217 (315)
T ss_dssp HHHHHHHHHHCSSSEEEESCG-GGHHHHH
T ss_pred HHHHHHHHHcCCCeEEEecCH-HHHHHHH
Confidence 567777777888888876543 3344433
No 408
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=27.63 E-value=3e+02 Score=26.94 Aligned_cols=138 Identities=14% Similarity=0.077 Sum_probs=76.8
Q ss_pred CCChhhHHHhhhhhhcCCcEEEec-C----C--------CChhH-HHHHHHHHHhcCCCceEEEeecCcch---hhhHHH
Q 008319 264 SITDKDWEDIKFGVDNQVDFYAVS-F----V--------KDAKV-VHELKDYLKSCNADIHVIVKIESADS---IPNLHS 326 (570)
Q Consensus 264 ~lt~kD~~dI~~~~~~gvd~I~~S-f----V--------~sa~d-v~~vr~~l~~~~~~i~IiaKIEt~~g---v~Nlde 326 (570)
.++-+|.---+.+-+.|+|.|.+| + + -+-++ +..++...+. .+++|++=+|+-=+ ++|...
T Consensus 24 ~~~ayD~~sA~~~~~aG~dai~vg~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~--~~~pviaD~~~Gyg~~~~~~~~~ 101 (255)
T 2qiw_A 24 LPTVWDTWSAGLVEEAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKITSA--VSIPVSVDVESGYGLSPADLIAQ 101 (255)
T ss_dssp CCEESSHHHHHHHHHTTCSCEEECHHHHHHHTTCCTTTCSCHHHHHHHHHHHHHH--CSSCEEEECTTCTTCCHHHHHHH
T ss_pred EecCcCHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCcCHHHHHHHHHHHHhc--CCCCEEeccCCCcCcHHHHHHHH
Confidence 456677766666777899998887 2 1 11111 1223333322 34889999986532 778888
Q ss_pred HHHh-CCEEEEcCCCc--ccC-CCCCCHHHHHHHHHHHHHHcCCCEEE--EccchhhhhcCCC-cChH-H-HhHHHHHHH
Q 008319 327 IISA-SDGAMVARGDL--GAE-LPIEDVPLLQEDIIRRCRSMQKPVIV--ATNMLESMIDHPT-PTRA-E-VSDIAIAVR 397 (570)
Q Consensus 327 Il~~-sDgImIgrGDL--g~e-ig~~~v~~~qk~Ii~~c~~~gKPviv--aTqmLeSM~~~~~-PtrA-E-v~Dv~nav~ 397 (570)
+++. ++||-|-=|.- +-+ ++.++.....+.+.++++..|.|+.+ =|.-+ ...... .... | +.+.-.+..
T Consensus 102 l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~--~~g~~~~~~~~~~ai~ra~a~~e 179 (255)
T 2qiw_A 102 ILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAV--KLGADVFEDPMVEAIKRIKLMEQ 179 (255)
T ss_dssp HHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHH--HHCTTTSSSHHHHHHHHHHHHHH
T ss_pred HHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechh--hccCCcchHHHHHHHHHHHHHHH
Confidence 8877 88888853320 000 12233444444444444555999433 23221 000111 1122 3 667777788
Q ss_pred hCccEEEe
Q 008319 398 EGADAVML 405 (570)
Q Consensus 398 ~G~D~vmL 405 (570)
.|+|++++
T Consensus 180 AGAd~i~~ 187 (255)
T 2qiw_A 180 AGARSVYP 187 (255)
T ss_dssp HTCSEEEE
T ss_pred cCCcEEEE
Confidence 89999999
No 409
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=27.62 E-value=3.2e+02 Score=27.63 Aligned_cols=117 Identities=16% Similarity=0.209 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 293 KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 293 ~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
+.+..+-..+.+ ..++|.........++.+.+-++. ..-+|+ |.| ++|+++=...-+++++.|++.|..|=.=
T Consensus 59 ~~~~~~v~~~a~--~~VPValHlDHg~~~e~~~~ai~~GFtSVMi---DgS-~~p~eENi~~Tk~vv~~ah~~gvsVEaE 132 (305)
T 1rvg_A 59 ALTLMAVELAKE--ARVPVAVHLDHGSSYESVLRALRAGFTSVMI---DKS-HEDFETNVRETRRVVEAAHAVGVTVEAE 132 (305)
T ss_dssp HHHHHHHHHHHH--CSSCEEEEEEEECSHHHHHHHHHTTCSEEEE---CCT-TSCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHh--CCCcEEEECCCCCCHHHHHHHHHcCCCeeee---CCC-CCCHHHHHHHHHHHHHHHHHcCCEEEEE
Q ss_pred ccchhhhhcC-----CCcChHHHhHHHHHHH-hCccEEEecccccCCCCH
Q 008319 372 TNMLESMIDH-----PTPTRAEVSDIAIAVR-EGADAVMLSGETAHGKFP 415 (570)
Q Consensus 372 TqmLeSM~~~-----~~PtrAEv~Dv~nav~-~G~D~vmLs~ETA~G~yP 415 (570)
=-.+-.-... ..-......+...++. -|+|++-.+--|+.|.|+
T Consensus 133 LG~vgg~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk 182 (305)
T 1rvg_A 133 LGRLAGIEEHVAVDEKDALLTNPEEARIFMERTGADYLAVAIGTSHGAYK 182 (305)
T ss_dssp ESCCCCSCC------CCTTCCCHHHHHHHHHHHCCSEEEECSSCCSSSBC
T ss_pred EeeccCccCCccccccccccCCHHHHHHHHHHHCCCEEEEecCccccccC
No 410
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=27.60 E-value=88 Score=33.91 Aligned_cols=66 Identities=18% Similarity=0.179 Sum_probs=42.2
Q ss_pred HHHhhhhhhcCCcEEEecCCCC---------hhHHHHHHHHHHhc--CCCceEEEeecCcchhhhHHHHHHh----CCEE
Q 008319 270 WEDIKFGVDNQVDFYAVSFVKD---------AKVVHELKDYLKSC--NADIHVIVKIESADSIPNLHSIISA----SDGA 334 (570)
Q Consensus 270 ~~dI~~~~~~gvd~I~~SfV~s---------a~dv~~vr~~l~~~--~~~i~IiaKIEt~~gv~NldeIl~~----sDgI 334 (570)
.++.+.+.+.|+|+|.+|--.. .+-+.++++.+... +.++.||+- -||.+-.+++++ +|++
T Consensus 354 ~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~----GGI~~g~Dv~kaLalGAdaV 429 (511)
T 1kbi_A 354 TEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVD----GGVRRGTDVLKALCLGAKGV 429 (511)
T ss_dssp HHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEE----SSCCSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEE----CCCCCHHHHHHHHHcCCCEE
Confidence 4556778899999999963211 12233455555432 346888882 466666666655 9999
Q ss_pred EEcCC
Q 008319 335 MVARG 339 (570)
Q Consensus 335 mIgrG 339 (570)
+|||.
T Consensus 430 ~iGr~ 434 (511)
T 1kbi_A 430 GLGRP 434 (511)
T ss_dssp EECHH
T ss_pred EECHH
Confidence 99983
No 411
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=27.52 E-value=91 Score=31.49 Aligned_cols=71 Identities=18% Similarity=0.292 Sum_probs=47.6
Q ss_pred HHHHh-CCEEEEcCC-----CcccCCCC--CCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcC-CCcChHHHhHHHHHH
Q 008319 326 SIISA-SDGAMVARG-----DLGAELPI--EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDH-PTPTRAEVSDIAIAV 396 (570)
Q Consensus 326 eIl~~-sDgImIgrG-----DLg~eig~--~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~-~~PtrAEv~Dv~nav 396 (570)
.++++ .|.|.+-+| ..|...+. ++-+....++.+++++..+-+++- .+. |.-+ -.|++.++
T Consensus 178 amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivL-------c~gGpIst---peDv~~~l 247 (286)
T 2p10_A 178 AMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIIL-------SHGGPIAN---PEDARFIL 247 (286)
T ss_dssp HHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEE-------EESTTCCS---HHHHHHHH
T ss_pred HHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEE-------ecCCCCCC---HHHHHHHH
Confidence 34444 899998877 44544433 344678889999999998887763 454 5433 45788888
Q ss_pred Hh--CccEEEec
Q 008319 397 RE--GADAVMLS 406 (570)
Q Consensus 397 ~~--G~D~vmLs 406 (570)
.. |+|+++..
T Consensus 248 ~~t~G~~G~~gA 259 (286)
T 2p10_A 248 DSCQGCHGFYGA 259 (286)
T ss_dssp HHCTTCCEEEES
T ss_pred hcCCCccEEEee
Confidence 88 99999985
No 412
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=27.51 E-value=65 Score=32.04 Aligned_cols=47 Identities=15% Similarity=0.259 Sum_probs=36.9
Q ss_pred chhhhHHHHHHhCCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEE
Q 008319 319 DSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 370 (570)
Q Consensus 319 ~gv~NldeIl~~sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPviv 370 (570)
++.+..+|+.+.+|++.|..|-|. ++....+...++.+++.|+|+++
T Consensus 45 ~~~~E~~e~~~~a~al~iNiGtl~-----~~~~~~m~~A~~~A~~~~~PvVL 91 (265)
T 3hpd_A 45 HAEEELEEMIRLADAVVINIGTLD-----SGWRRSMVKATEIANELGKPIVL 91 (265)
T ss_dssp CCTTTHHHHHHHCSEEEEECTTCC-----HHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCHHHHHHHHHHCCeEEEECCCCC-----hHHHHHHHHHHHHHHHcCCCEEE
Confidence 355678999999999999876653 34556667778899999999986
No 413
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=27.43 E-value=1.2e+02 Score=28.34 Aligned_cols=68 Identities=24% Similarity=0.177 Sum_probs=40.9
Q ss_pred hHHHhhhhhhcCCcEEEecCC---CCh------hHHHHHHHHHHhcCCCceEEE--eecCcchhhhHHHHHHh-CCEEEE
Q 008319 269 DWEDIKFGVDNQVDFYAVSFV---KDA------KVVHELKDYLKSCNADIHVIV--KIESADSIPNLHSIISA-SDGAMV 336 (570)
Q Consensus 269 D~~dI~~~~~~gvd~I~~SfV---~sa------~dv~~vr~~l~~~~~~i~Iia--KIEt~~gv~NldeIl~~-sDgImI 336 (570)
+.+++..+. .|+|+|.++-+ .+. -+...++.+.+....++++++ -| ..+|+.+.++. ++|+-+
T Consensus 97 t~~e~~~A~-~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPviaiGGI----~~~nv~~~~~~Ga~gVav 171 (210)
T 3ceu_A 97 SVEEVKNRK-HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKIIDSKVMALGGI----NEDNLLEIKDFGFGGAVV 171 (210)
T ss_dssp SHHHHHTTG-GGSSEEEECCCC---------CCCCHHHHHHHHHTTCSSTTEEEESSC----CTTTHHHHHHTTCSEEEE
T ss_pred CHHHHHHHh-hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEEECCC----CHHHHHHHHHhCCCEEEE
Confidence 445566666 89999987643 211 234445554433113556666 23 24699999888 999999
Q ss_pred cCCCc
Q 008319 337 ARGDL 341 (570)
Q Consensus 337 grGDL 341 (570)
+++=.
T Consensus 172 ~s~i~ 176 (210)
T 3ceu_A 172 LGDLW 176 (210)
T ss_dssp SHHHH
T ss_pred hHHhH
Confidence 86533
No 414
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=27.37 E-value=2e+02 Score=27.33 Aligned_cols=135 Identities=15% Similarity=0.174 Sum_probs=71.5
Q ss_pred HHhhhhhhcCCcEEEe-----cCCCCh----hHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEEcCCC
Q 008319 271 EDIKFGVDNQVDFYAV-----SFVKDA----KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGD 340 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~-----SfV~sa----~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrGD 340 (570)
+.++.+.+.|+|++-+ .||.+. +.++++|++ .+....+=-||++++- -++..+++ +||+.+.-.-
T Consensus 21 ~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~---~~~~~~vhlmv~dp~~--~i~~~~~aGadgv~vh~e~ 95 (230)
T 1tqj_A 21 EEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPL---TKKTLDVHLMIVEPEK--YVEDFAKAGADIISVHVEH 95 (230)
T ss_dssp HHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGG---CCSEEEEEEESSSGGG--THHHHHHHTCSEEEEECST
T ss_pred HHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhh---cCCcEEEEEEccCHHH--HHHHHHHcCCCEEEECccc
Confidence 4456666789987522 344332 233333322 1112233367777643 45666666 9999996210
Q ss_pred cccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec-ccccC--CCCHHH
Q 008319 341 LGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS-GETAH--GKFPLK 417 (570)
Q Consensus 341 Lg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs-~ETA~--G~yP~e 417 (570)
.. + + .-.+.++.++++|+-+++++ +|. |..| ...++..++|.+++- -+... -+|+..
T Consensus 96 ~~---~-~----~~~~~~~~i~~~g~~~gv~~--------~p~-t~~e---~~~~~~~~~D~v~~msv~pg~ggq~~~~~ 155 (230)
T 1tqj_A 96 NA---S-P----HLHRTLCQIRELGKKAGAVL--------NPS-TPLD---FLEYVLPVCDLILIMSVNPGFGGQSFIPE 155 (230)
T ss_dssp TT---C-T----THHHHHHHHHHTTCEEEEEE--------CTT-CCGG---GGTTTGGGCSEEEEESSCC----CCCCGG
T ss_pred cc---c-h----hHHHHHHHHHHcCCcEEEEE--------eCC-CcHH---HHHHHHhcCCEEEEEEeccccCCccCcHH
Confidence 01 1 1 23477888899999999863 221 1122 123466789977533 22222 246655
Q ss_pred HHHHHHHHHHHhh
Q 008319 418 AVKVMHTVALRTE 430 (570)
Q Consensus 418 aV~~m~~I~~~aE 430 (570)
..+.++++.+..+
T Consensus 156 ~~~~i~~lr~~~~ 168 (230)
T 1tqj_A 156 VLPKIRALRQMCD 168 (230)
T ss_dssp GHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5666666555543
No 415
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=27.24 E-value=1.2e+02 Score=29.91 Aligned_cols=22 Identities=18% Similarity=0.330 Sum_probs=19.4
Q ss_pred CCHHHHHHHHHhCCcEEEEecC
Q 008319 112 SSREMIWKLAEEGMNVARLNMS 133 (570)
Q Consensus 112 ~~~e~l~~li~~Gm~v~RiN~s 133 (570)
-+.+.|+.|-+.|+|++|+-++
T Consensus 42 ~~~~d~~~l~~~G~n~vRi~i~ 63 (320)
T 3nco_A 42 IEDEYFKIIKERGFDSVRIPIR 63 (320)
T ss_dssp CCHHHHHHHHHHTCCEEEECCC
T ss_pred CCHHHHHHHHHCCCCEEEEeee
Confidence 3588999999999999999764
No 416
>3ddy_A Lumazine protein, LUMP; luminescent bacteria, lumazine PR riboflavin synthase, luminescence, luminescent protein; HET: RBF; 2.50A {Photobacterium leiognathi}
Probab=26.82 E-value=1.6e+02 Score=27.74 Aligned_cols=54 Identities=24% Similarity=0.327 Sum_probs=40.6
Q ss_pred EEEeccC-CcccccccCCEEEEeCCeeEEEEEEEeCCeEEEEEEe-------CcEeccCcccccC
Q 008319 200 TVSVNYD-DFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVD-------GGELKSRRHLNVR 256 (570)
Q Consensus 200 ~i~v~~~-~l~~~v~~Gd~I~iDDG~i~l~V~~~~~~~i~~~v~~-------gG~l~s~KgIn~p 256 (570)
.+.+..+ .+.+.++.||.|-+|. +.|+|.+++++.+.+.+ . =|.++....||+.
T Consensus 23 ~l~i~~~~~~~~~~~~GdSIAvnG--vCLTV~~~~~~~f~vdv-~ETl~~T~Lg~l~~G~~VNLE 84 (186)
T 3ddy_A 23 RHGIAFPEGMFQLVDVDTVMLVNG--CSNTVVRILGDMVYFDI-DQALGTTTFDGLKEGDQVNLE 84 (186)
T ss_dssp EEEEECCTTTGGGCCTTCEEEETT--EEEEEEEEETTEEEEEE-CTTTTTSSGGGCCTTCEEEEE
T ss_pred EEEEEeChHHhccCCCCCeEEEee--EEEEEEEEcCCEEEEEh-HHhhhhCchhhcCCCCEEEEC
Confidence 4445443 5788999999999997 89999999999999888 3 2344555567764
No 417
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=26.81 E-value=3.6e+02 Score=27.71 Aligned_cols=95 Identities=15% Similarity=0.126 Sum_probs=48.4
Q ss_pred ChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEEcCCCcccCCC-CCCHHHHHHHHHHHHHHcCCCE
Q 008319 291 DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELP-IEDVPLLQEDIIRRCRSMQKPV 368 (570)
Q Consensus 291 sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrGDLg~eig-~~~v~~~qk~Ii~~c~~~gKPv 368 (570)
+.+++..+++.. +.+++.|.= ...+......+. +|+|.+. |--|..+. -+.-.....++.+.. .-..||
T Consensus 205 ~w~~i~~lr~~~-----~~PvivK~v--~~~e~A~~a~~~GaD~I~vs-n~GG~~~d~~~~~~~~L~~i~~av-~~~ipV 275 (352)
T 3sgz_A 205 CWNDLSLLQSIT-----RLPIILKGI--LTKEDAELAMKHNVQGIVVS-NHGGRQLDEVSASIDALREVVAAV-KGKIEV 275 (352)
T ss_dssp CHHHHHHHHHHC-----CSCEEEEEE--CSHHHHHHHHHTTCSEEEEC-CGGGTSSCSSCCHHHHHHHHHHHH-TTSSEE
T ss_pred CHHHHHHHHHhc-----CCCEEEEec--CcHHHHHHHHHcCCCEEEEe-CCCCCccCCCccHHHHHHHHHHHh-CCCCeE
Confidence 345555555532 456666631 122333333333 7888873 11111111 112223333333322 125788
Q ss_pred EEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 369 IVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 369 ivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
|.. ...-+ -.|+..++..|+|++++.
T Consensus 276 ia~---------GGI~~---g~Dv~kaLalGA~aV~iG 301 (352)
T 3sgz_A 276 YMD---------GGVRT---GTDVLKALALGARCIFLG 301 (352)
T ss_dssp EEE---------SSCCS---HHHHHHHHHTTCSEEEES
T ss_pred EEE---------CCCCC---HHHHHHHHHcCCCEEEEC
Confidence 864 23222 468999999999999985
No 418
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=26.77 E-value=1e+02 Score=30.38 Aligned_cols=127 Identities=15% Similarity=0.200 Sum_probs=64.7
Q ss_pred cCCCCCC-hhhHHHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhh-hHHHHHHhC------
Q 008319 260 ANLPSIT-DKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIP-NLHSIISAS------ 331 (570)
Q Consensus 260 ~~lp~lt-~kD~~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~-NldeIl~~s------ 331 (570)
..+|.+| ..|...+.+..+. +|++.++- ++.++...++ .+.+ ...+|+.| .|.. +++|+..++
T Consensus 86 ~Gl~~~te~~d~~~~~~l~~~-vd~~kIga-~~~~n~~ll~-~~a~--~~kPV~lk----~G~~~t~~e~~~Av~~i~~~ 156 (262)
T 1zco_A 86 YGLVTVTEVMDTRHVELVAKY-SDILQIGA-RNSQNFELLK-EVGK--VENPVLLK----RGMGNTIQELLYSAEYIMAQ 156 (262)
T ss_dssp HTCEEEEECCCGGGHHHHHHH-CSEEEECG-GGTTCHHHHH-HHTT--SSSCEEEE----CCTTCCHHHHHHHHHHHHTT
T ss_pred cCCcEEEeeCCHHhHHHHHhh-CCEEEECc-ccccCHHHHH-HHHh--cCCcEEEe----cCCCCCHHHHHHHHHHHHHC
Confidence 3455444 3566777777787 88887762 2222222222 2333 23445554 4554 666666553
Q ss_pred ---CEEEEcCCCccc-CCCCCCHHHHHHHHHHHHHHcCCCE-EEEccchhhhhcCCCcChHHHhH-HHHHHHhCccEEEe
Q 008319 332 ---DGAMVARGDLGA-ELPIEDVPLLQEDIIRRCRSMQKPV-IVATNMLESMIDHPTPTRAEVSD-IAIAVREGADAVML 405 (570)
Q Consensus 332 ---DgImIgrGDLg~-eig~~~v~~~qk~Ii~~c~~~gKPv-ivaTqmLeSM~~~~~PtrAEv~D-v~nav~~G~D~vmL 405 (570)
+.+++=||=-+. .++.+.+.. ..+-...+..|.|| +.+|+ ....+.=+.. ...|+..|+|++|+
T Consensus 157 Gn~~i~L~~RG~~~~~~y~~~~v~L--~ai~~lk~~~~~pVi~d~sH--------~~g~~~~v~~~~~aAva~Ga~Gl~i 226 (262)
T 1zco_A 157 GNENVILCERGIRTFETATRFTLDI--SAVPVVKELSHLPIIVDPSH--------PAGRRSLVIPLAKAAYAIGADGIMV 226 (262)
T ss_dssp TCCCEEEEECCBCCSCCSSSSBCCT--THHHHHHHHBSSCEEECSST--------TTCSGGGHHHHHHHHHHTTCSEEEE
T ss_pred CCCeEEEEECCCCCCCCcChhhcCH--HHHHHHHhhhCCCEEEEcCC--------CCCccchHHHHHHHHHHcCCCEEEE
Confidence 688888883222 334443220 11111223458998 44332 1112221112 22478999999997
No 419
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=26.77 E-value=92 Score=32.64 Aligned_cols=55 Identities=16% Similarity=0.100 Sum_probs=38.2
Q ss_pred CceEEEeecCcchhhhHHHHHHh--CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEE
Q 008319 308 DIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 370 (570)
Q Consensus 308 ~i~IiaKIEt~~gv~NldeIl~~--sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPviv 370 (570)
.++|+ -=|+......+.++++. +|.|.+..+-+| | + .--.+|...|+++|.++.+
T Consensus 281 ~iPIa-~dE~~~~~~~~~~li~~~a~D~v~ik~~~~G---G---i-t~a~kia~~A~a~gi~v~~ 337 (412)
T 3stp_A 281 IVPIS-GGEHEFSVIGCAELINRKAVSVLQYDTNRVG---G---I-TAAQKINAIAEAAQIPVIP 337 (412)
T ss_dssp SSCEE-ECTTCCSHHHHHHHHHTTCCSEECCCHHHHT---H---H-HHHHHHHHHHHHHTCCBCC
T ss_pred CCCEE-eCCCCCCHHHHHHHHHcCCCCEEecChhhcC---C---H-HHHHHHHHHHHHcCCEEEe
Confidence 45554 45777777888888865 899888543332 1 1 2236889999999999875
No 420
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=26.73 E-value=4.6e+02 Score=26.88 Aligned_cols=114 Identities=17% Similarity=0.097 Sum_probs=63.3
Q ss_pred CCChhhHHHh--------hhhhhcCCcEEEecCC-------------CCh----------------hHHHHHHHHHHhcC
Q 008319 264 SITDKDWEDI--------KFGVDNQVDFYAVSFV-------------KDA----------------KVVHELKDYLKSCN 306 (570)
Q Consensus 264 ~lt~kD~~dI--------~~~~~~gvd~I~~SfV-------------~sa----------------~dv~~vr~~l~~~~ 306 (570)
.||..|++.+ +.+.+.|+|+|=+-.. +.. +-++.+|+.+ +
T Consensus 150 ~mt~~eI~~ii~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~v---g 226 (361)
T 3gka_A 150 ALELDEIPGVVAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVW---S 226 (361)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHH---C
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHc---C
Confidence 6888888777 3456789999976433 221 1122333333 4
Q ss_pred CCceEEEeecCcc---h------hhhHHHHHHh-----CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHH-HcCCCEEEE
Q 008319 307 ADIHVIVKIESAD---S------IPNLHSIISA-----SDGAMVARGDLGAELPIEDVPLLQEDIIRRCR-SMQKPVIVA 371 (570)
Q Consensus 307 ~~i~IiaKIEt~~---g------v~NldeIl~~-----sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~-~~gKPviva 371 (570)
.+ .|..||=--+ + ++...++++. +|.|-+..|.. +. + .++..+ ..+.|+|..
T Consensus 227 ~~-~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~----~~-~-------~~~~ik~~~~iPvi~~ 293 (361)
T 3gka_A 227 AA-RVGVHLAPRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESFG----GD-A-------IGQQLKAAFGGPFIVN 293 (361)
T ss_dssp GG-GEEEEECTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCCS----TT-C-------CHHHHHHHHCSCEEEE
T ss_pred CC-eEEEecccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCCC----CH-H-------HHHHHHHHcCCCEEEe
Confidence 45 6888883211 1 2333344433 78888776652 21 1 122222 236898864
Q ss_pred ccchhhhhcCCCcChHHHhHHHHHHHhC-ccEEEec
Q 008319 372 TNMLESMIDHPTPTRAEVSDIAIAVREG-ADAVMLS 406 (570)
Q Consensus 372 TqmLeSM~~~~~PtrAEv~Dv~nav~~G-~D~vmLs 406 (570)
. .. +.. +...++..| +|+|++.
T Consensus 294 G---------gi-t~e---~a~~~l~~G~aD~V~iG 316 (361)
T 3gka_A 294 E---------NF-TLD---SAQAALDAGQADAVAWG 316 (361)
T ss_dssp S---------SC-CHH---HHHHHHHTTSCSEEEES
T ss_pred C---------CC-CHH---HHHHHHHcCCccEEEEC
Confidence 2 22 333 344667787 9999984
No 421
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=26.45 E-value=1.1e+02 Score=29.37 Aligned_cols=57 Identities=16% Similarity=0.104 Sum_probs=42.5
Q ss_pred HHHH-HHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHH-HHHhCccEEEecccccCCCCHHHHHHHHHHHH
Q 008319 350 VPLL-QEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSGETAHGKFPLKAVKVMHTVA 426 (570)
Q Consensus 350 v~~~-qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~ 426 (570)
...+ -...++.++++|++|.+-|- . . ..+... ++..|+|+|+- +||..+.+.+.+.|
T Consensus 178 ~~~~~~~~~v~~~~~~G~~v~~wTv------n--~-----~~~~~~~l~~~GvdgIiT-------D~p~~~~~~~~~~~ 236 (248)
T 1zcc_A 178 PAQMRRPGIIEASRKAGLEIMVYYG------G--D-----DMAVHREIATSDVDYINL-------DRPDLFAAVRSGMA 236 (248)
T ss_dssp HHHHHSHHHHHHHHHHTCEEEEECC------C--C-----CHHHHHHHHHSSCSEEEE-------SCHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHCCCEEEEECC------C--C-----HHHHHHHHHHcCCCEEEE-------CCHHHHHHHHHHhc
Confidence 3344 57899999999999998762 1 1 134557 78889999886 69998888877544
No 422
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=26.44 E-value=1.2e+02 Score=31.31 Aligned_cols=63 Identities=14% Similarity=0.215 Sum_probs=41.9
Q ss_pred CceEEEecCCCCCCHHH----HHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCCcEEEEeecC
Q 008319 100 KTKIVCTIGPSTSSREM----IWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTK 166 (570)
Q Consensus 100 ~tKIi~TiGPs~~~~e~----l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~ 166 (570)
+....+|+|....+++. .+++.++|.+.+.|+..|++.+.-.+.++.+|+ ..+ ..+.|++|..
T Consensus 132 ~vp~y~~~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~---a~G-~~~~l~vDan 198 (389)
T 2oz8_A 132 RVKAYASGLDFHLDDDAFVSLFSHAASIGYSAFKIKVGHRDFDRDLRRLELLKT---CVP-AGSKVMIDPN 198 (389)
T ss_dssp EEEEEEECCBTTCCHHHHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHT---TSC-TTCEEEEECT
T ss_pred ceEEEEeCCCcCCCHHHHHHHHHHHHHhCCCEEEEccCCCCHHHHHHHHHHHHH---hhC-CCCeEEEECC
Confidence 44566666542224443 466788999999999999888766666666664 344 4566777753
No 423
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=26.40 E-value=4.3e+02 Score=25.21 Aligned_cols=129 Identities=17% Similarity=0.226 Sum_probs=73.8
Q ss_pred HHhhhhhhcCCcEE-----EecCCCC----hhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh-CCEEEEcCCC
Q 008319 271 EDIKFGVDNQVDFY-----AVSFVKD----AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGD 340 (570)
Q Consensus 271 ~dI~~~~~~gvd~I-----~~SfV~s----a~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrGD 340 (570)
+.++.+ +.|+|++ --.||.+ ..-++.+|++. +..+-+=-||++++. -++...++ +|+|.+-.
T Consensus 17 ~~i~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~~---~~~~dvhLmv~dp~~--~i~~~~~aGAd~itvh~-- 88 (231)
T 3ctl_A 17 EQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLA---TKPLDCHLMVTRPQD--YIAQLARAGADFITLHP-- 88 (231)
T ss_dssp HHHHHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTC---CSCEEEEEESSCGGG--THHHHHHHTCSEEEECG--
T ss_pred HHHHHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhcc---CCcEEEEEEecCHHH--HHHHHHHcCCCEEEECc--
Confidence 445555 7787764 1234433 34445555431 334556668888765 35777777 99998841
Q ss_pred cccCC-CCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEE-ecccccCC--CCH-
Q 008319 341 LGAEL-PIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVM-LSGETAHG--KFP- 415 (570)
Q Consensus 341 Lg~ei-g~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vm-Ls~ETA~G--~yP- 415 (570)
|- . + --.+.++.++++|+-++++ . +|. |..| ....+..++|.++ +|-+.-.| +|.
T Consensus 89 ---Ea~~-~----~~~~~i~~i~~~G~k~gv~-------l-np~-tp~~---~~~~~l~~~D~VlvmsV~pGfggQ~f~~ 148 (231)
T 3ctl_A 89 ---ETIN-G----QAFRLIDEIRRHDMKVGLI-------L-NPE-TPVE---AMKYYIHKADKITVMTVDPGFAGQPFIP 148 (231)
T ss_dssp ---GGCT-T----THHHHHHHHHHTTCEEEEE-------E-CTT-CCGG---GGTTTGGGCSEEEEESSCTTCSSCCCCT
T ss_pred ---ccCC-c----cHHHHHHHHHHcCCeEEEE-------E-ECC-CcHH---HHHHHHhcCCEEEEeeeccCcCCccccH
Confidence 22 1 1 1358899999999999997 2 332 2222 2233556899886 34454333 344
Q ss_pred --HHHHHHHHHHHH
Q 008319 416 --LKAVKVMHTVAL 427 (570)
Q Consensus 416 --~eaV~~m~~I~~ 427 (570)
++-++.+++++.
T Consensus 149 ~~l~kI~~lr~~~~ 162 (231)
T 3ctl_A 149 EMLDKLAELKAWRE 162 (231)
T ss_dssp THHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 455555555543
No 424
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=26.31 E-value=1.7e+02 Score=29.81 Aligned_cols=65 Identities=11% Similarity=0.095 Sum_probs=48.7
Q ss_pred HHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHhCCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 008319 295 VHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 295 v~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPviva 371 (570)
+..+++.|.+.|..+.+-+--+.... +.+++++-.|.|+.+-.+ ...+..+-+.|++.++|++.+
T Consensus 92 a~~~~~~l~~lnp~v~v~~~~~~~~~--~~~~~~~~~dvVv~~~d~----------~~~r~~ln~~~~~~~ip~i~~ 156 (346)
T 1y8q_A 92 AEASLERAQNLNPMVDVKVDTEDIEK--KPESFFTQFDAVCLTCCS----------RDVIVKVDQICHKNSIKFFTG 156 (346)
T ss_dssp HHHHHHHHHHTCTTSEEEEECSCGGG--CCHHHHTTCSEEEEESCC----------HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHhHCCCeEEEEEecccCc--chHHHhcCCCEEEEcCCC----------HHHHHHHHHHHHHcCCCEEEE
Confidence 34567788888888887776555443 567888889999876322 356778999999999999875
No 425
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=26.25 E-value=59 Score=33.02 Aligned_cols=46 Identities=20% Similarity=0.335 Sum_probs=35.3
Q ss_pred EecCCCCCCHHHHHHHHHhC--CcEEEEecCCCChHHHHHHHHHHHHH
Q 008319 105 CTIGPSTSSREMIWKLAEEG--MNVARLNMSHGDHASHQKTIDLVKEY 150 (570)
Q Consensus 105 ~TiGPs~~~~e~l~~li~~G--m~v~RiN~sHg~~e~~~~~i~~ir~~ 150 (570)
+-+|...+..+..+.++++| ++..-+|++||+.....+.|+.+|+.
T Consensus 99 v~~g~~~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~ 146 (336)
T 1ypf_A 99 ISVGVKEDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKH 146 (336)
T ss_dssp EEECCSHHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHH
T ss_pred EeCCCCHHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHh
Confidence 33565444567788899999 99999999999887777777777753
No 426
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=25.94 E-value=2.7e+02 Score=28.63 Aligned_cols=121 Identities=17% Similarity=0.171 Sum_probs=0.0
Q ss_pred CChhhHHHh--------hhhhhcCCcEEEe-------------cCCCChhH----------------HHHHHHHHHhcCC
Q 008319 265 ITDKDWEDI--------KFGVDNQVDFYAV-------------SFVKDAKV----------------VHELKDYLKSCNA 307 (570)
Q Consensus 265 lt~kD~~dI--------~~~~~~gvd~I~~-------------SfV~sa~d----------------v~~vr~~l~~~~~ 307 (570)
||..|++.+ +.+.+.|+|+|=+ |..+...| ++.+|+.+ +.
T Consensus 157 mt~~eI~~~i~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~av---g~ 233 (376)
T 1icp_A 157 LTTDEIPQIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEI---GS 233 (376)
T ss_dssp CCTTTHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHH---CG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHh---cC
Q ss_pred CceEEEee---------cCcchhhhHHHHHHh-----CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcc
Q 008319 308 DIHVIVKI---------ESADSIPNLHSIISA-----SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATN 373 (570)
Q Consensus 308 ~i~IiaKI---------Et~~gv~NldeIl~~-----sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTq 373 (570)
+ .|..|| +....++...++++. +|.|-+.-|.....-+.. .....+-...+..+.|++....
T Consensus 234 ~-~V~vrls~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~---~~~~~~~~vr~~~~iPvi~~G~ 309 (376)
T 1icp_A 234 D-RVGIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKI---ECTESLVPMRKAYKGTFIVAGG 309 (376)
T ss_dssp G-GEEEEECTTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC---------CCCCSHHHHHHCCSCEEEESS
T ss_pred C-ceEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCcc---ccHHHHHHHHHHcCCCEEEeCC
Q ss_pred chhhhhcCCCcChHHHhHHHHHHHhC-ccEEEe
Q 008319 374 MLESMIDHPTPTRAEVSDIAIAVREG-ADAVML 405 (570)
Q Consensus 374 mLeSM~~~~~PtrAEv~Dv~nav~~G-~D~vmL 405 (570)
+ .. .+...++..| +|+|++
T Consensus 310 i-~~------------~~a~~~l~~g~aD~V~~ 329 (376)
T 1icp_A 310 Y-DR------------EDGNRALIEDRADLVAY 329 (376)
T ss_dssp C-CH------------HHHHHHHHTTSCSEEEE
T ss_pred C-CH------------HHHHHHHHCCCCcEEee
No 427
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=25.87 E-value=86 Score=31.20 Aligned_cols=63 Identities=8% Similarity=0.117 Sum_probs=40.5
Q ss_pred hhHHHhhhhhhcCCcEEEec------CCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh----CCEEEEc
Q 008319 268 KDWEDIKFGVDNQVDFYAVS------FVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVA 337 (570)
Q Consensus 268 kD~~dI~~~~~~gvd~I~~S------fV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~----sDgImIg 337 (570)
+|.+.++.+++.|++.|++. |-- |+....++......+..+|+ | .|+.+-+++... +||++||
T Consensus 161 h~~~El~rAl~~~a~iIGINNRnL~tf~v---dl~~t~~L~~~ip~~~~~Vs--E--SGI~t~~dv~~l~~~G~~a~LVG 233 (258)
T 4a29_A 161 NDENDLDIALRIGARFIGIMSRDFETGEI---NKENQRKLISMIPSNVVKVA--K--LGISERNEIEELRKLGVNAFLIS 233 (258)
T ss_dssp SSHHHHHHHHHTTCSEEEECSBCTTTCCB---CHHHHHHHHTTSCTTSEEEE--E--ESSCCHHHHHHHHHTTCCEEEEC
T ss_pred chHHHHHHHhcCCCcEEEEeCCCcccccc---CHHHHHHHHhhCCCCCEEEE--c--CCCCCHHHHHHHHHCCCCEEEEC
Confidence 56777888888999999875 222 23334444444445566665 3 377666666554 7999997
No 428
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=25.74 E-value=3.5e+02 Score=26.74 Aligned_cols=87 Identities=15% Similarity=0.189 Sum_probs=55.6
Q ss_pred HHHHHHhcCC-CceEEEeecCcchhhhHHHHHHh-CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccch
Q 008319 298 LKDYLKSCNA-DIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNML 375 (570)
Q Consensus 298 vr~~l~~~~~-~i~IiaKIEt~~gv~NldeIl~~-sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmL 375 (570)
+|+.|.+ |. .+.+++.+.+++-++. .... .|.+++..-|- + .+...++. .+..+...|+|+++=++
T Consensus 30 ~k~~l~~-G~~~~gl~~~~~~p~~~e~---a~~~GaD~v~lDlEh~----~-~~~~~~~~-~l~a~~~~~~~~~VRv~-- 97 (287)
T 2v5j_A 30 FKAALKA-GRPQIGLWLGLSSSYSAEL---LAGAGFDWLLIDGEHA----P-NNVQTVLT-QLQAIAPYPSQPVVRPS-- 97 (287)
T ss_dssp HHHHHHT-TCCEEEEEECSCCHHHHHH---HHTSCCSEEEEESSSS----S-CCHHHHHH-HHHHHTTSSSEEEEECS--
T ss_pred HHHHHHC-CCcEEEEEEECCCHHHHHH---HHhCCCCEEEEeCCCc----c-chHHHHHH-HHHHHHhcCCCEEEEEC--
Confidence 6666654 44 5778999988765533 2223 89999977664 2 22233332 34555667888887432
Q ss_pred hhhhcCCCcChHHHhHHHHHHHhCccEEEec
Q 008319 376 ESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 376 eSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (570)
..+. .|+..++..|+|+||+.
T Consensus 98 -------~~d~---~di~~~ld~ga~~ImlP 118 (287)
T 2v5j_A 98 -------WNDP---VQIKQLLDVGTQTLLVP 118 (287)
T ss_dssp -------SSCH---HHHHHHHHTTCCEEEES
T ss_pred -------CCCH---HHHHHHHhCCCCEEEeC
Confidence 2222 27888888999999996
No 429
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=25.73 E-value=1e+02 Score=30.24 Aligned_cols=52 Identities=12% Similarity=0.138 Sum_probs=31.2
Q ss_pred CHHHHHHHHH-hCCcEEEEecCCC------ChHHHHHHHHHHHHHHhhcCCCcEEEEeecCC
Q 008319 113 SREMIWKLAE-EGMNVARLNMSHG------DHASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (570)
Q Consensus 113 ~~e~l~~li~-~Gm~v~RiN~sHg------~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~G 167 (570)
+.+.++.|.+ .|+|++|+-+... +++.+.+.++.+=+...+ +-+.+++|+-+
T Consensus 44 ~~~d~~~l~~~~G~N~vRi~~~~~~~~~~~~~~~~l~~ld~~v~~a~~---~Gl~vild~h~ 102 (306)
T 2cks_A 44 TDSSLDALAYDWKADIIRLSMYIQEDGYETNPRGFTDRMHQLIDMATA---RGLYVIVDWHI 102 (306)
T ss_dssp SHHHHHHHHHTSCCSEEEEEEESSTTSGGGCHHHHHHHHHHHHHHHHT---TTCEEEEEEEC
T ss_pred CHHHHHHHHHHcCCCEEEEEeeecCCCcccCHHHHHHHHHHHHHHHHH---CCCEEEEEecC
Confidence 5688998986 7999999987642 222132333333233333 44677888654
No 430
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=25.64 E-value=77 Score=30.55 Aligned_cols=58 Identities=14% Similarity=0.218 Sum_probs=42.8
Q ss_pred hhhhcCCcEEEecCCCChhH--------HHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh----CCEEEEcC
Q 008319 275 FGVDNQVDFYAVSFVKDAKV--------VHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVAR 338 (570)
Q Consensus 275 ~~~~~gvd~I~~SfV~sa~d--------v~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~----sDgImIgr 338 (570)
.|.+.|+++| .|||.+-+| +.++.++++..+.++.|++ .+++|..+|.+. +|.+-|.+
T Consensus 118 ~Aa~AGa~yI-SPfvgRi~d~~~dG~~~v~~i~~~~~~~~~~t~ila-----AS~R~~~~v~~~a~~G~d~~Tip~ 187 (212)
T 3r8r_A 118 LAARAGATYV-SPFLGRLDDIGHNGLDLISEVKQIFDIHGLDTQIIA-----ASIRHPQHVTEAALRGAHIGTMPL 187 (212)
T ss_dssp HHHHHTCSEE-EEBHHHHHHTTSCHHHHHHHHHHHHHHHTCCCEEEE-----BSCCSHHHHHHHHHTTCSEEEECH
T ss_pred HHHHcCCeEE-EeccchhhhcCCChHHHHHHHHHHHHHcCCCCEEEE-----ecCCCHHHHHHHHHcCCCEEEcCH
Confidence 4667899986 578877655 4566777888788888887 688888888863 77766653
No 431
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=25.49 E-value=3.1e+02 Score=25.65 Aligned_cols=98 Identities=15% Similarity=0.203 Sum_probs=52.3
Q ss_pred HHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEee-----c--CcchhhhHHHHHHhC-C-EEEEcCCCc
Q 008319 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI-----E--SADSIPNLHSIISAS-D-GAMVARGDL 341 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKI-----E--t~~gv~NldeIl~~s-D-gImIgrGDL 341 (570)
+.++.+.+.|++.+...- .+.++...+.++.++.. ++....-+ . +.+.++.|++.+... + .+-| |..
T Consensus 23 ~~l~~~~~~Gv~~~v~~~-~~~~~~~~~~~l~~~~~-~~~~~~G~hP~~~~~~~~~~~~~l~~~~~~~~~~~~~i--GEi 98 (259)
T 1zzm_A 23 ASLQRAAQAGVGKIIVPA-TEAENFARVLALAENYQ-PLYAALGLHPGMLEKHSDVSLEQLQQALERRPAKVVAV--GEI 98 (259)
T ss_dssp HHHHHHHHTTEEEEEEEC-CSGGGHHHHHHHHHHCT-TEEEEECCCGGGGGGCCHHHHHHHHHHHHHCCSSEEEE--EEE
T ss_pred HHHHHHHHcCCCEEEEec-CCHHHHHHHHHHHHhCC-CeEEEEEecccccccCCHHHHHHHHHHHhcCCCCEEEE--EEe
Confidence 455667788999765442 34667777766554433 43322222 0 112344454444331 2 2333 455
Q ss_pred ccCCCCC-CHHHHH----HHHHHHHHHcCCCEEEEc
Q 008319 342 GAELPIE-DVPLLQ----EDIIRRCRSMQKPVIVAT 372 (570)
Q Consensus 342 g~eig~~-~v~~~q----k~Ii~~c~~~gKPvivaT 372 (570)
|.+.... .-...| +..++.|.+.|+||++-|
T Consensus 99 Gld~~~~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH~ 134 (259)
T 1zzm_A 99 GLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHS 134 (259)
T ss_dssp EEECCSSCCCHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEe
Confidence 5554321 113445 456777999999999753
No 432
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=25.40 E-value=1.7e+02 Score=30.22 Aligned_cols=90 Identities=17% Similarity=0.245 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHhcCCCceEEEe-ecCcchhhhHHHHHHh-CCEEEEcCCCccc-----------------CCCCCCHHHH
Q 008319 293 KVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVARGDLGA-----------------ELPIEDVPLL 353 (570)
Q Consensus 293 ~dv~~vr~~l~~~~~~i~IiaK-IEt~~gv~NldeIl~~-sDgImIgrGDLg~-----------------eig~~~v~~~ 353 (570)
+.+.++++.. +++|++| +-.-...+......+. +|+|.|+=. -|. +.+++....+
T Consensus 196 ~~I~~l~~~~-----~~PVivK~vg~g~s~e~A~~l~~aGad~I~V~g~-GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L 269 (365)
T 3sr7_A 196 KHLSDYAKKL-----QLPFILKEVGFGMDVKTIQTAIDLGVKTVDISGR-GGTSFAYIENRRGGNRSYLNQWGQTTAQVL 269 (365)
T ss_dssp HHHHHHHHHC-----CSCEEEEECSSCCCHHHHHHHHHHTCCEEECCCB-C--------------CGGGTTCSCBHHHHH
T ss_pred HHHHHHHHhh-----CCCEEEEECCCCCCHHHHHHHHHcCCCEEEEeCC-CCcccchhhccccccccccccccccHHHHH
Q ss_pred HHHHHHHHHHc--CCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEe
Q 008319 354 QEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 405 (570)
Q Consensus 354 qk~Ii~~c~~~--gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL 405 (570)
. .++.. ..|+|...-+-... |++.++..|+|++++
T Consensus 270 ~-----~v~~~~~~ipvia~GGI~~g~------------Dv~KaLalGAdaV~i 306 (365)
T 3sr7_A 270 L-----NAQPLMDKVEILASGGIRHPL------------DIIKALVLGAKAVGL 306 (365)
T ss_dssp H-----HHGGGTTTSEEEECSSCCSHH------------HHHHHHHHTCSEEEE
T ss_pred H-----HHHHhcCCCeEEEeCCCCCHH------------HHHHHHHcCCCEEEE
No 433
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=25.40 E-value=1.4e+02 Score=30.08 Aligned_cols=62 Identities=18% Similarity=0.215 Sum_probs=49.3
Q ss_pred hhhHHHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHH
Q 008319 267 DKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSII 328 (570)
Q Consensus 267 ~kD~~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl 328 (570)
+.|.+.++.-++.|+||+.--++-+++.+..+.+.+...|-+++|++=|==.....++.-+.
T Consensus 163 ~~d~~~Lk~KvdAGAdf~iTQ~ffD~~~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~~~~~ 224 (304)
T 3fst_A 163 QADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKLA 224 (304)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCSCHHHHHHHHHHHHHTTCCSCEECEECCCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeCccCCHHHHHHHHHHHHhcCCCCcEEEEecccCCHHHHHHHH
Confidence 35778888888999999999999999999999999988888888888764444555555553
No 434
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=25.24 E-value=2.2e+02 Score=28.55 Aligned_cols=153 Identities=14% Similarity=0.082 Sum_probs=76.7
Q ss_pred HHHHHh-CCEEEEcCCCcc--cCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHH-HhHHHHHHHhCc
Q 008319 325 HSIISA-SDGAMVARGDLG--AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (570)
Q Consensus 325 deIl~~-sDgImIgrGDLg--~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~ 400 (570)
+..++. +|||++. |=-| ..+..++-..+.+..++.++ -..|||.- ....+-.| +.-.-.|-..|+
T Consensus 52 ~~li~~Gv~Gi~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~-grvpViaG---------vg~~~t~~ai~la~~A~~~Ga 120 (315)
T 3na8_A 52 ERLIDGGVHAIAPL-GSTGEGAYLSDPEWDEVVDFTLKTVA-HRVPTIVS---------VSDLTTAKTVRRAQFAESLGA 120 (315)
T ss_dssp HHHHHTTCSEEECS-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCBEEE---------CCCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEe---------cCCCCHHHHHHHHHHHHhcCC
Confidence 333444 8999974 1111 11222232233333333332 24788864 23334445 555566778899
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCcccCCCCCh-hHHHHHHHHHHHhhcCCcEEE--EcC--C
Q 008319 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFSAHKSHM-GDMFAFHSTTMANTLNTPIIV--FTR--T 475 (570)
Q Consensus 401 D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~-~~~ia~~av~~a~~~~a~Iiv--~T~--s 475 (570)
|++|+..=--...-+-+.++....|+..+.--+. +|+...+ ...++ .+.+ .+++.+... |+- .|. -
T Consensus 121 davlv~~P~y~~~s~~~l~~~f~~va~a~~lPii---lYn~P~~-tg~~l~~~~~----~~L~a~~pn-IvgiKdssgd~ 191 (315)
T 3na8_A 121 EAVMVLPISYWKLNEAEVFQHYRAVGEAIGVPVM---LYNNPGT-SGIDMSVELI----LRIVREVDN-VTMVKESTGDI 191 (315)
T ss_dssp SEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEE---EEECHHH-HSCCCCHHHH----HHHHHHSTT-EEEEEECSSCH
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhCCCcEE---EEeCcch-hCcCCCHHHH----HHHHhcCCC-EEEEECCCCCH
Confidence 9999964433333467889999999988753211 1111000 00111 2333 344223332 222 332 1
Q ss_pred hHHHHHHHhcCCCCeEEEEeCC
Q 008319 476 GSMAVILSHYRPSSTIFAFTNQ 497 (570)
Q Consensus 476 G~tA~~ls~~RP~~pIiavt~~ 497 (570)
.+..+.+....+...|+.-...
T Consensus 192 ~~~~~~~~~~~~~f~v~~G~D~ 213 (315)
T 3na8_A 192 QRMHKLRLLGEGRVPFYNGCNP 213 (315)
T ss_dssp HHHHHHHHHTTTCSCEEECCGG
T ss_pred HHHHHHHHHcCCCEEEEeCchH
Confidence 3556667777777777765443
No 435
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=25.12 E-value=6.4e+02 Score=26.80 Aligned_cols=152 Identities=12% Similarity=0.011 Sum_probs=91.7
Q ss_pred CCChhhHHHhhh-hhhcCCcEEEecC----CC-----ChhHHHHHHHHHHhcCCCceEEEeec--Ccchhh---------
Q 008319 264 SITDKDWEDIKF-GVDNQVDFYAVSF----VK-----DAKVVHELKDYLKSCNADIHVIVKIE--SADSIP--------- 322 (570)
Q Consensus 264 ~lt~kD~~dI~~-~~~~gvd~I~~Sf----V~-----sa~dv~~vr~~l~~~~~~i~IiaKIE--t~~gv~--------- 322 (570)
.++..|+-.|.. -.+.|++.|=+.+ +. ++.+...++.+-+. ..++.+.+.+= +.-|+.
T Consensus 26 ~~~~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~-~~~~~l~~l~R~~N~~G~~~~~ddv~~~ 104 (464)
T 2nx9_A 26 RLRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQA-MPNTPLQMLLRGQNLLGYRHYADDVVDT 104 (464)
T ss_dssp CCCGGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHH-CSSSCEEEEECGGGTTSSSCCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHHh-CCCCeEEEEeccccccCcccccchhhHH
Confidence 467778766543 3467999886653 11 45555555554432 23444444442 223332
Q ss_pred hHHHHHHh-CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHH-HHHhCc
Q 008319 323 NLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGA 400 (570)
Q Consensus 323 NldeIl~~-sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~ 400 (570)
+++..++. .|.+-|- ....++ ...+..++.++++|+.|..+= ++...+.-+...+.+++. +...|+
T Consensus 105 ~v~~a~~~Gvd~i~if-------~~~sd~-~ni~~~i~~ak~~G~~v~~~i----~~~~~~~~~~e~~~~~a~~l~~~Ga 172 (464)
T 2nx9_A 105 FVERAVKNGMDVFRVF-------DAMNDV-RNMQQALQAVKKMGAHAQGTL----CYTTSPVHNLQTWVDVAQQLAELGV 172 (464)
T ss_dssp HHHHHHHTTCCEEEEC-------CTTCCT-HHHHHHHHHHHHTTCEEEEEE----ECCCCTTCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCcCEEEEE-------EecCHH-HHHHHHHHHHHHCCCEEEEEE----EeeeCCCCCHHHHHHHHHHHHHCCC
Confidence 23444444 6755542 122222 345688999999999986431 333334334555555544 667899
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHHHh
Q 008319 401 DAVMLSGETAHGKFPLKAVKVMHTVALRT 429 (570)
Q Consensus 401 D~vmLs~ETA~G~yP~eaV~~m~~I~~~a 429 (570)
|.+.|. +|+=+-.|-++-+.+..+..+.
T Consensus 173 d~I~l~-DT~G~~~P~~v~~lv~~l~~~~ 200 (464)
T 2nx9_A 173 DSIALK-DMAGILTPYAAEELVSTLKKQV 200 (464)
T ss_dssp SEEEEE-ETTSCCCHHHHHHHHHHHHHHC
T ss_pred CEEEEc-CCCCCcCHHHHHHHHHHHHHhc
Confidence 999995 7887888999999988888766
No 436
>1z85_A Hypothetical protein TM1380; alpha/beta knot fold, structural genomics, joint center for structural genomics, JCSG; 2.12A {Thermotoga maritima}
Probab=24.95 E-value=1.5e+02 Score=28.77 Aligned_cols=72 Identities=19% Similarity=0.088 Sum_probs=42.5
Q ss_pred ccccCCEEEEeCC---eeEEEEEEEeCCeEEEEEEeCcEeccCcccccCCCccCCCCCChhhH--HHhhhhhhcCCcEEE
Q 008319 211 DVEVGDILLVDGG---MMSLAVKSKTKDLVKCIVVDGGELKSRRHLNVRGKSANLPSITDKDW--EDIKFGVDNQVDFYA 285 (570)
Q Consensus 211 ~v~~Gd~I~iDDG---~i~l~V~~~~~~~i~~~v~~gG~l~s~KgIn~p~~~~~lp~lt~kD~--~dI~~~~~~gvd~I~ 285 (570)
.+++||.|.+-|| ....+|.+++++.+.+++...-........ ...+- -.+...|+ .-|+.+.+.|++-|.
T Consensus 40 Rl~~Gd~v~l~dg~G~~~~a~I~~~~~~~~~~~i~~~~~~~~e~~~---~i~L~-~al~K~~r~e~ilqkatELGV~~I~ 115 (234)
T 1z85_A 40 RLKEGDVIEATDGNGFSYTCILKSLKKKTAAAKIVKVEEKEKEPTE---KLSVV-VPIGRWERTRFLIEKCVELGVDEIF 115 (234)
T ss_dssp TCCTTCEEEEECSBSEEEEEEEEEECSSCEEEEEEEEEECCCCCSS---CEEEE-EECCCHHHHHHHHHHHHHTTCSEEE
T ss_pred cCCCCCEEEEEeCCCCEEEEEEEEecCCEEEEEEEEEeccCCCCCc---eEEEE-EeccchHHHHHHHHHHHHhCCCEEE
Confidence 4589999998665 456788888888888877643211111111 11111 12333343 456788999999764
Q ss_pred e
Q 008319 286 V 286 (570)
Q Consensus 286 ~ 286 (570)
.
T Consensus 116 p 116 (234)
T 1z85_A 116 F 116 (234)
T ss_dssp E
T ss_pred E
Confidence 3
No 437
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=24.89 E-value=1.3e+02 Score=30.71 Aligned_cols=60 Identities=15% Similarity=0.218 Sum_probs=41.6
Q ss_pred CceEEEecCCCCCCHHH----HHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCCcEEEEeec
Q 008319 100 KTKIVCTIGPSTSSREM----IWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (570)
Q Consensus 100 ~tKIi~TiGPs~~~~e~----l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl 165 (570)
+....+|+|- .++|. .+++.++|.+.+.+++.|++.+.-.+.++.+|++ .+ ..+.+++|.
T Consensus 134 ~v~~~~~~~~--~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a---~g-~~~~l~vDa 197 (378)
T 2qdd_A 134 PVPINSSIST--GTPDQMLGLIAEAAAQGYRTHSAKIGGSDPAQDIARIEAISAG---LP-DGHRVTFDV 197 (378)
T ss_dssp CEEBEEEECS--CCHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHS---CC-TTCEEEEEC
T ss_pred CCceEEEecC--CCHHHHHHHHHHHHHHhhhheeecCCCCChHHHHHHHHHHHHH---hC-CCCEEEEeC
Confidence 4556678764 34443 5667889999999999998777666677766653 44 345677775
No 438
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=24.78 E-value=2.2e+02 Score=31.47 Aligned_cols=131 Identities=15% Similarity=0.248 Sum_probs=65.0
Q ss_pred CCChhhHHHh--------hhhhhcCCcEEEec----C----------CCChh------------HHHHHHHHH-HhcCCC
Q 008319 264 SITDKDWEDI--------KFGVDNQVDFYAVS----F----------VKDAK------------VVHELKDYL-KSCNAD 308 (570)
Q Consensus 264 ~lt~kD~~dI--------~~~~~~gvd~I~~S----f----------V~sa~------------dv~~vr~~l-~~~~~~ 308 (570)
.||..|++.+ +.+.+.|+|+|=+- | .+... -+.++-+.+ +..+.+
T Consensus 145 ~~t~~ei~~~i~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~ 224 (690)
T 3k30_A 145 AMTKQDIDDLRRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGR 224 (690)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 6788888776 34567899999772 2 11111 122222222 223678
Q ss_pred ceEEEee------cCcchhhhHHHHHHh----CCEEEEcCCCcccCCCCCC--HHHHHHHHHHHHH-HcCCCEEEEccch
Q 008319 309 IHVIVKI------ESADSIPNLHSIISA----SDGAMVARGDLGAELPIED--VPLLQEDIIRRCR-SMQKPVIVATNML 375 (570)
Q Consensus 309 i~IiaKI------Et~~gv~NldeIl~~----sDgImIgrGDLg~eig~~~--v~~~qk~Ii~~c~-~~gKPvivaTqmL 375 (570)
..|..|| +.--.+++..++++. +|.+-+.-|.+......+. =...+...++..+ ..++|||...
T Consensus 225 ~~v~~r~s~~~~~~~g~~~~~~~~~~~~l~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G--- 301 (690)
T 3k30_A 225 AAVACRITVEEEIDGGITREDIEGVLRELGELPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTTKPVVGVG--- 301 (690)
T ss_dssp SEEEEEEECCCCSTTSCCHHHHHHHHHHHTTSSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGCSSCEEECS---
T ss_pred ceEEEEECccccCCCCCCHHHHHHHHHHHHhhcCEEEEecccccccCCCCccCCccccHHHHHHHHHHcCCeEEEeC---
Confidence 8899998 111112333444443 6777666543321110000 0011222333333 3478988642
Q ss_pred hhhhcCCCcChHHHhHHHHHHHhC-ccEEEec
Q 008319 376 ESMIDHPTPTRAEVSDIAIAVREG-ADAVMLS 406 (570)
Q Consensus 376 eSM~~~~~PtrAEv~Dv~nav~~G-~D~vmLs 406 (570)
..-+. .+...++..| +|+|++.
T Consensus 302 ------~i~~~---~~a~~~l~~g~~d~v~~g 324 (690)
T 3k30_A 302 ------RFTSP---DAMVRQIKAGILDLIGAA 324 (690)
T ss_dssp ------CCCCH---HHHHHHHHTTSCSEEEES
T ss_pred ------CCCCH---HHHHHHHHCCCcceEEEc
Confidence 22222 2344667777 9999984
No 439
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=24.61 E-value=75 Score=31.69 Aligned_cols=20 Identities=35% Similarity=0.456 Sum_probs=18.4
Q ss_pred HHHHHHHHHhCCcEEEEecC
Q 008319 114 REMIWKLAEEGMNVARLNMS 133 (570)
Q Consensus 114 ~e~l~~li~~Gm~v~RiN~s 133 (570)
.+.++.|-+.|+|++|+-++
T Consensus 47 ~~~~~~~~~~G~n~vRi~~~ 66 (358)
T 1ece_A 47 RSMLDQIKSLGYNTIRLPYS 66 (358)
T ss_dssp HHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeecc
Confidence 67899999999999999987
No 440
>1vhy_A Hypothetical protein HI0303; PSI, protein structure initiative, NEW YORK SGX research CEN structural genomics, nysgxrc; HET: MSE; 1.90A {Haemophilus influenzae} SCOP: b.122.1.2 c.116.1.5 PDB: 1nxz_A
Probab=24.56 E-value=1.4e+02 Score=29.34 Aligned_cols=74 Identities=15% Similarity=0.152 Sum_probs=42.0
Q ss_pred ccccCCEEEEeCC---eeEEEEEEEeCCeEEEEEEeCcEeccCcccccCCCccCCCCCChhhHHHhhhhhhcCCcEEEe
Q 008319 211 DVEVGDILLVDGG---MMSLAVKSKTKDLVKCIVVDGGELKSRRHLNVRGKSANLPSITDKDWEDIKFGVDNQVDFYAV 286 (570)
Q Consensus 211 ~v~~Gd~I~iDDG---~i~l~V~~~~~~~i~~~v~~gG~l~s~KgIn~p~~~~~lp~lt~kD~~dI~~~~~~gvd~I~~ 286 (570)
.+++||.|.+-|| ....+|.+++++.+.+++..--.......+.+ .....+|. .++-..-|+.+.+.|++-|..
T Consensus 35 Rl~~Gd~v~l~dg~g~~~~a~I~~~~~~~~~~~i~~~~~~~~e~~~~l-~L~~al~K-~~r~e~ilqkatELGv~~I~p 111 (257)
T 1vhy_A 35 RMTEGEQLELFDGSNHIYPAKIIESNKKSVKVEILGRELADKESHLKI-HLGQVISR-GERMEFTIQKSVELGVNVITP 111 (257)
T ss_dssp CCCTTCEEEEECSSSEEEEEEEEEECSSCEEEEECCCEECCCCCSSCE-EEEEEC-----CCHHHHHHHHHTTCCEEEE
T ss_pred ccCCCCEEEEEcCCCCEEEEEEEEeeCCeEEEEEEEEecccCCCCceE-EEEEecCc-hHHHHHHHHHHHhhCcCEEEE
Confidence 4689999998765 35678888888888887764321111111110 00112232 233345678899999996543
No 441
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=24.47 E-value=5.2e+02 Score=25.51 Aligned_cols=87 Identities=9% Similarity=0.113 Sum_probs=54.7
Q ss_pred HHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHhCCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccc
Q 008319 295 VHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNM 374 (570)
Q Consensus 295 v~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqm 374 (570)
++.++++.++. .+.++.-+=.+..++-+.+ .+|.+-||-+++ ...+ +++.+.+.||||++.|.|
T Consensus 75 l~~l~~~~~~~--Gl~~~te~~d~~~~~~l~~---~~d~~kIga~~~------~n~~-----ll~~~a~~~kPV~lk~G~ 138 (280)
T 2qkf_A 75 LKIFEKVKAEF--GIPVITDVHEPHQCQPVAE---VCDVIQLPAFLA------RQTD-----LVVAMAKTGNVVNIKKPQ 138 (280)
T ss_dssp HHHHHHHHHHH--CCCEEEECCSGGGHHHHHH---HCSEEEECGGGT------TBHH-----HHHHHHHTCCEEEEECCT
T ss_pred HHHHHHHHHHc--CCcEEEecCCHHHHHHHHh---hCCEEEECcccc------cCHH-----HHHHHHcCCCcEEEECCC
Confidence 44566665443 4667887777776666655 479999996555 2333 555666889999986554
Q ss_pred hhhhhcCCCcChHHHhHHHHHHH-hCccEEEe
Q 008319 375 LESMIDHPTPTRAEVSDIAIAVR-EGADAVML 405 (570)
Q Consensus 375 LeSM~~~~~PtrAEv~Dv~nav~-~G~D~vmL 405 (570)
- -|..|+...+..+. .|.+-++|
T Consensus 139 ~--------~t~~e~~~A~~~i~~~Gn~~i~L 162 (280)
T 2qkf_A 139 F--------LSPSQMKNIVEKFHEAGNGKLIL 162 (280)
T ss_dssp T--------SCGGGHHHHHHHHHHTTCCCEEE
T ss_pred C--------CCHHHHHHHHHHHHHcCCCeEEE
Confidence 3 24457666666654 56643443
No 442
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=24.31 E-value=5.5e+02 Score=28.54 Aligned_cols=131 Identities=15% Similarity=0.120 Sum_probs=65.5
Q ss_pred CCChhhHHHh--------hhhhhcCCcEEEecC-------------CCChhH------------HHHHHHHH-HhcCCCc
Q 008319 264 SITDKDWEDI--------KFGVDNQVDFYAVSF-------------VKDAKV------------VHELKDYL-KSCNADI 309 (570)
Q Consensus 264 ~lt~kD~~dI--------~~~~~~gvd~I~~Sf-------------V~sa~d------------v~~vr~~l-~~~~~~i 309 (570)
.||..|++.+ +.+.+.|+|+|=+-. .+...| +.++-+.+ +..+.+.
T Consensus 138 ~~t~~eI~~~i~~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~ 217 (729)
T 1o94_A 138 EMDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDC 217 (729)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCc
Confidence 6788887666 345578999986632 322111 22222222 2236788
Q ss_pred eEEEeecC-----cchh---hhHHHHHHh----CCEEEEcCCCc---cc-CCCCCCHH-HHHHHHHHHHH-HcCCCEEEE
Q 008319 310 HVIVKIES-----ADSI---PNLHSIISA----SDGAMVARGDL---GA-ELPIEDVP-LLQEDIIRRCR-SMQKPVIVA 371 (570)
Q Consensus 310 ~IiaKIEt-----~~gv---~NldeIl~~----sDgImIgrGDL---g~-eig~~~v~-~~qk~Ii~~c~-~~gKPviva 371 (570)
.|..||-- ..|+ ++..++++. +|.+-+.-|-+ .. ..+....+ ..+...++..+ ..++|||..
T Consensus 218 pv~vrls~~~~~~~~G~~~~~~~~~~~~~l~~~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~ 297 (729)
T 1o94_A 218 AIATRFGVDTVYGPGQIEAEVDGQKFVEMADSLVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGV 297 (729)
T ss_dssp EEEEEEEEECSSCTTSCCTTTHHHHHHHHHGGGCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTCSSCEECC
T ss_pred eEEEEEccccCcCCCCCCchHHHHHHHHHHHhhcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHCCCEEEEe
Confidence 89999821 1122 233333332 68776665532 11 01110000 11223333333 358898853
Q ss_pred ccchhhhhcCCCcChHHHhHHHHHHHhC-ccEEEec
Q 008319 372 TNMLESMIDHPTPTRAEVSDIAIAVREG-ADAVMLS 406 (570)
Q Consensus 372 TqmLeSM~~~~~PtrAEv~Dv~nav~~G-~D~vmLs 406 (570)
...-+.. +...++..| +|+|++.
T Consensus 298 ---------G~i~~~~---~a~~~l~~g~aD~V~~g 321 (729)
T 1o94_A 298 ---------GRYTDPE---KMIEIVTKGYADIIGCA 321 (729)
T ss_dssp ---------SCCCCHH---HHHHHHHTTSCSBEEES
T ss_pred ---------CCCCCHH---HHHHHHHCCCCCEEEeC
Confidence 2232332 344678887 9999985
No 443
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=24.29 E-value=3.8e+02 Score=27.13 Aligned_cols=146 Identities=10% Similarity=-0.002 Sum_probs=83.0
Q ss_pred HHhhhhhhcCCcEEEecC------CCC----hhHHHHHHHHHHhcCCCceEEEe------------ecC------cchhh
Q 008319 271 EDIKFGVDNQVDFYAVSF------VKD----AKVVHELKDYLKSCNADIHVIVK------------IES------ADSIP 322 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~Sf------V~s----a~dv~~vr~~l~~~~~~i~IiaK------------IEt------~~gv~ 322 (570)
+.++.+.+.|+++|-+.+ -.. .+++.++++.+++.|-.+..+.- +-+ ..+++
T Consensus 37 e~l~~aa~~G~~~VEl~~~~~~p~~~~~~~~~~~~~~l~~~l~~~GL~i~~~~~~~~~~p~~~~g~l~~~d~~~r~~~i~ 116 (386)
T 1muw_A 37 ETVQRLAELGAHGVTFHDDDLIPFGSSDTERESHIKRFRQALDATGMTVPMATTNLFTHPVFKDGGFTANDRDVRRYALR 116 (386)
T ss_dssp HHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBCCEEECCCSSSGGGTTCSTTCSSHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeeCCCCCcccCcccccHHHHHHHHHHHHHhCCeEEEEecccccccccccCCCCCCCHHHHHHHHH
Confidence 456777789999997753 122 45788899999988877655431 222 22345
Q ss_pred hHHHHHHh-----CCEEEEcCCCcccCCCC--------CCHHHHHHHHHHHHHHcCCCEEEEccchhhhhc-----CCCc
Q 008319 323 NLHSIISA-----SDGAMVARGDLGAELPI--------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMID-----HPTP 384 (570)
Q Consensus 323 NldeIl~~-----sDgImIgrGDLg~eig~--------~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~-----~~~P 384 (570)
.+.+.++. ++.|.+.+|..+.+.+. +.+....+++...+.++|.++-++ +|.|-. +..+
T Consensus 117 ~~~~~i~~A~~LGa~~vvv~~g~~~~~~~~~~~~~~~~~~~~e~L~~l~~~A~~~G~~v~l~---lE~~~~e~~~~~~~~ 193 (386)
T 1muw_A 117 KTIRNIDLAVELGAKTYVAWGGREGAESGAAKDVRVALDRMKEAFDLLGEYVTSQGYDIRFA---IEPKPNEPRGDILLP 193 (386)
T ss_dssp HHHHHHHHHHHHTCSEEEECCTTCEESSTTSCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEE---ECCCSSSSSSEESSC
T ss_pred HHHHHHHHHHHhCCCEEEECCCCCcccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEE---EeeCCCCCcccccCC
Confidence 55555544 67888877765432211 234455567888888888433332 444422 2334
Q ss_pred ChHHHhHHHHHHHhCcc-EEEeccccc----CCCCHHHHHHH
Q 008319 385 TRAEVSDIAIAVREGAD-AVMLSGETA----HGKFPLKAVKV 421 (570)
Q Consensus 385 trAEv~Dv~nav~~G~D-~vmLs~ETA----~G~yP~eaV~~ 421 (570)
|-.+..++...+ |.+ .+-+.-+|. .|.-|.+.++.
T Consensus 194 t~~~~~~li~~v--~~pn~vgl~lD~~H~~~~g~d~~~~l~~ 233 (386)
T 1muw_A 194 TVGHALAFIERL--ERPELYGVNPEVGHEQMAGLNFPHGIAQ 233 (386)
T ss_dssp SHHHHHHHHTTS--SSGGGEEECCBHHHHHTTTCCHHHHHHH
T ss_pred CHHHHHHHHHHh--CCccceEEEeeccchhhcCCCHHHHHHH
Confidence 555544443322 233 244444553 56667666553
No 444
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=24.18 E-value=5e+02 Score=25.19 Aligned_cols=145 Identities=17% Similarity=0.237 Sum_probs=79.3
Q ss_pred CChhhHHH-hhhhhhcC-CcEEEecCCCChhHHHHHHHHHHhcCCCceEEEee----cCcchhhhHHHHHHh-----CCE
Q 008319 265 ITDKDWED-IKFGVDNQ-VDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI----ESADSIPNLHSIISA-----SDG 333 (570)
Q Consensus 265 lt~kD~~d-I~~~~~~g-vd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKI----Et~~gv~NldeIl~~-----sDg 333 (570)
.++.++.. ++.+...| +|+|=+=+-...+.+.++.++... .+++||+=- +|+ ..+++.+++.. +|.
T Consensus 96 ~~~~~~~~ll~~~~~~~~~d~iDvEl~~~~~~~~~l~~~a~~--~~~kiI~S~Hdf~~TP-~~~el~~~~~~~~~~gaDI 172 (258)
T 4h3d_A 96 ISRDYYTTLNKEISNTGLVDLIDVELFMGDEVIDEVVNFAHK--KEVKVIISNHDFNKTP-KKEEIVSRLCRMQELGADL 172 (258)
T ss_dssp CCHHHHHHHHHHHHHTTCCSEEEEEGGGCHHHHHHHHHHHHH--TTCEEEEEEEESSCCC-CHHHHHHHHHHHHHTTCSE
T ss_pred CCHHHHHHHHHHHHhcCCchhhHHhhhccHHHHHHHHHHHHh--CCCEEEEEEecCCCCC-CHHHHHHHHHHHHHhCCCE
Confidence 35555544 45566665 899877754444555556555544 345666533 233 33445444433 687
Q ss_pred EEEcCCCcccCCC--CCCHHHHHHHHHHHHHH-cCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHh-CccEEEecccc
Q 008319 334 AMVARGDLGAELP--IEDVPLLQEDIIRRCRS-MQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE-GADAVMLSGET 409 (570)
Q Consensus 334 ImIgrGDLg~eig--~~~v~~~qk~Ii~~c~~-~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~-G~D~vmLs~ET 409 (570)
+=|+ -++ .+++..+..-.-+.... .++|+|.- +|-.....+| +.+.+.- -.....+...+
T Consensus 173 vKia------~~~~~~~D~l~Ll~~~~~~~~~~~~~P~I~~-----~MG~~G~~SR-----i~~~~fGS~lTf~~~~~~s 236 (258)
T 4h3d_A 173 PKIA------VMPQNEKDVLVLLEATNEMFKIYADRPIITM-----SMSGMGVISR-----LCGEIFGSALTFGAAKSVS 236 (258)
T ss_dssp EEEE------ECCSSHHHHHHHHHHHHHHHHHTCSSCBEEE-----ECTGGGGGGG-----TCHHHHCBCEEECBCC---
T ss_pred EEEE------EccCCHHHHHHHHHHHHHHHHhcCCCCEEEE-----eCCCCChHHH-----HHHHHhCCceEeccCCCCC
Confidence 7665 233 23444444433332222 47898863 6777777777 4444431 12233467789
Q ss_pred cCCCCHHHHHHHHHHHHHH
Q 008319 410 AHGKFPLKAVKVMHTVALR 428 (570)
Q Consensus 410 A~G~yP~eaV~~m~~I~~~ 428 (570)
|-|.++++-++.+-++..+
T Consensus 237 APGQl~~~el~~~l~lL~~ 255 (258)
T 4h3d_A 237 APGQISFKELNSVLNLLHK 255 (258)
T ss_dssp CTTCCBHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHH
Confidence 9999998887776666543
No 445
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=24.09 E-value=1.8e+02 Score=29.26 Aligned_cols=94 Identities=14% Similarity=0.105 Sum_probs=52.9
Q ss_pred HHHHHh-CCEEEEcCCCc--ccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHH-HhHHHHHHHhCc
Q 008319 325 HSIISA-SDGAMVARGDL--GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (570)
Q Consensus 325 deIl~~-sDgImIgrGDL--g~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~ 400 (570)
+-.++. +|||++. |=- +..+..++-..+.+..++.++ -..|||.-| . . +-+| +.-.-.|-..|+
T Consensus 40 ~~li~~Gv~gl~v~-GtTGE~~~Ls~eEr~~vi~~~~~~~~-grvpViaGv--------g-~-st~~ai~la~~A~~~Ga 107 (314)
T 3d0c_A 40 EFLLQNGIEVIVPN-GNTGEFYALTIEEAKQVATRVTELVN-GRATVVAGI--------G-Y-SVDTAIELGKSAIDSGA 107 (314)
T ss_dssp HHHHHTTCSEECTT-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEEE--------C-S-SHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEC-cccCChhhCCHHHHHHHHHHHHHHhC-CCCeEEecC--------C-c-CHHHHHHHHHHHHHcCC
Confidence 344444 8999873 111 112232333333344444332 246887642 2 3 4445 445556777899
Q ss_pred cEEEecccccCCCCHHHHHHHHHHHHHHhh
Q 008319 401 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (570)
Q Consensus 401 D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE 430 (570)
|++|+..=--...-+-+.++....|+..+.
T Consensus 108 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 137 (314)
T 3d0c_A 108 DCVMIHQPVHPYITDAGAVEYYRNIIEALD 137 (314)
T ss_dssp SEEEECCCCCSCCCHHHHHHHHHHHHHHSS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 999996433233345778889999988775
No 446
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=24.04 E-value=3.7e+02 Score=26.92 Aligned_cols=159 Identities=9% Similarity=0.097 Sum_probs=83.7
Q ss_pred ceEEEeecCcch--h-----hhHHHHHHh-----CCEEEEc---CCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcc
Q 008319 309 IHVIVKIESADS--I-----PNLHSIISA-----SDGAMVA---RGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATN 373 (570)
Q Consensus 309 i~IiaKIEt~~g--v-----~NldeIl~~-----sDgImIg---rGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTq 373 (570)
..|+.|.|+... . +-+.-++.. .+.|+-. -|..+ .-+...|+..|.++.+..
T Consensus 47 ~~v~~K~E~l~p~~~gs~K~R~~~~~l~~a~~~G~~~vv~~s~tsGN~g------------~alA~aa~~~G~~~~iv~- 113 (342)
T 4d9b_A 47 REIYIKRDDVTPIAMGGNKLRKLEFLVADALREGADTLITAGAIQSNHV------------RQTAAVAAKLGLHCVALL- 113 (342)
T ss_dssp SCEEEEEGGGCSSTTCCTHHHHHHHHHHHHHHTTCCEEEEEEETTCHHH------------HHHHHHHHHHTCEEEEEE-
T ss_pred CEEEEEeCCCCCCCCcchHHHhHHHHHHHHHHcCCCEEEEcCCcccHHH------------HHHHHHHHHhCCcEEEEE-
Confidence 469999998765 1 122222221 4555543 13332 345667999999988751
Q ss_pred chhhhhcCCCcChH---H-HhHHHHHHHhCccEEEecccccCCCCHHHHHH-HHHHHHHHhhcCCCCCCCCCCcccCCCC
Q 008319 374 MLESMIDHPTPTRA---E-VSDIAIAVREGADAVMLSGETAHGKFPLKAVK-VMHTVALRTESSLPVSITPPTQFSAHKS 448 (570)
Q Consensus 374 mLeSM~~~~~PtrA---E-v~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~-~m~~I~~~aE~~~~~~~~~~~~~~~~~~ 448 (570)
....|... + ...+...-..|++.+..... .+..++++ ...++..+-...+.. ... ..
T Consensus 114 ------p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~----~~~~~~~~~~a~~l~~~~~~~~~~----p~~---~~- 175 (342)
T 4d9b_A 114 ------ENPIGTTAENYLTNGNRLLLDLFNTQIEMCDAL----TDPDAQLQTLATRIEAQGFRPYVI----PVG---GS- 175 (342)
T ss_dssp ------ECTTCCCCHHHHHSHHHHHHHHTTCEEEECSCC----SSHHHHHHHHHHHHHHTTCCEEEC----CGG---GC-
T ss_pred ------eCCCCCccccccccchHHHHHHCCCEEEEECch----hhHHHHHHHHHHHHHhcCCceEEe----CCC---CC-
Confidence 11122110 0 12344556789998877543 23444443 222222111111111 000 01
Q ss_pred ChhH--HHHHHHHHHHhhcC----C-cEEEEcCChHHHHHHHh----cCCCCeEEEEeCCH
Q 008319 449 HMGD--MFAFHSTTMANTLN----T-PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQE 498 (570)
Q Consensus 449 ~~~~--~ia~~av~~a~~~~----a-~Iiv~T~sG~tA~~ls~----~RP~~pIiavt~~~ 498 (570)
++.. -....+.++.++++ . .||+.+-+|.|+--+++ +.|.+.||+|.+..
T Consensus 176 n~~~~~G~~t~~~EI~~q~~~~~~~d~vv~~vGtGGt~aGi~~~~k~~~~~~~vigVe~~~ 236 (342)
T 4d9b_A 176 SALGAMGYVESALEIAQQCEEVVGLSSVVVASGSAGTHAGLAVGLEHLMPDVELIGVTVSR 236 (342)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTTCCCCEEEEEESSSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred ChHHHHHHHHHHHHHHHHHhccCCCCEEEEeCCCCHHHHHHHHHHHhhCCCCeEEEEEecC
Confidence 1211 12223456666654 4 78999999988777664 47999999999864
No 447
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=24.02 E-value=2.1e+02 Score=27.82 Aligned_cols=40 Identities=15% Similarity=0.122 Sum_probs=28.8
Q ss_pred HHhhhhhhcCCcEEEecC----CC------ChhHHHHHHHHHHhcCCCce
Q 008319 271 EDIKFGVDNQVDFYAVSF----VK------DAKVVHELKDYLKSCNADIH 310 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~Sf----V~------sa~dv~~vr~~l~~~~~~i~ 310 (570)
+.++.+.+.|+|+|-+.. +. +.+++.++++.+++.|-.+.
T Consensus 19 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~ 68 (340)
T 2zds_A 19 EVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCW 68 (340)
T ss_dssp HHHHHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHcCCCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeEE
Confidence 446778889999998764 22 33457889999988776654
No 448
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=23.98 E-value=1.1e+02 Score=27.88 Aligned_cols=59 Identities=14% Similarity=0.198 Sum_probs=40.8
Q ss_pred eeecCCCEEEEEEec--CCC---CccEEEeccCCccc---ccccCCEEEEeCCeeEEEEEEEeCCeEEE
Q 008319 179 IILKEGQEFNFTIKR--GVS---TEDTVSVNYDDFVN---DVEVGDILLVDGGMMSLAVKSKTKDLVKC 239 (570)
Q Consensus 179 i~l~~G~~v~lt~~~--~~~---~~~~i~v~~~~l~~---~v~~Gd~I~iDDG~i~l~V~~~~~~~i~~ 239 (570)
.-++.|++.+|+... .+| ......++.+.|.+ .+++|+.+.+++ . ..+|++++++.|+.
T Consensus 62 ~gm~~Ge~~~v~Ipp~~aYG~~~~~~V~~v~~~~f~~~~~~~~~G~~~~~~~-~-~~~V~~v~~~~V~v 128 (157)
T 3pr9_A 62 LEMDVGEEREVVLPPEKAFGKRDPSKIKLIPLSEFTKRGIKPIKGLTITIDG-I-PGKIVSINSGRVLV 128 (157)
T ss_dssp HHCCTTCEEEEEECGGGTTCCCCGGGEEEEEHHHHHHTTCCCCTTCEEEETT-E-EEEEEEEETTEEEE
T ss_pred cCCCCCCEEEEEECcHHhcCCCChHhEEEcCHHHCCcccCCcCCCcEEEecC-C-CeEEEEEcCCEEEE
Confidence 457899999998752 333 33455666666654 257799999964 3 46889998887654
No 449
>2e6z_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.91 E-value=64 Score=24.60 Aligned_cols=36 Identities=14% Similarity=0.079 Sum_probs=27.3
Q ss_pred ccccCCEEEEeCCe---eEEEEEEEeCCeEEEEEEeCcE
Q 008319 211 DVEVGDILLVDGGM---MSLAVKSKTKDLVKCIVVDGGE 246 (570)
Q Consensus 211 ~v~~Gd~I~iDDG~---i~l~V~~~~~~~i~~~v~~gG~ 246 (570)
.+++||.|.+-+|- +.-+|.+++.+.++..+...|.
T Consensus 7 ~f~~GD~V~V~~Gpf~g~~G~V~evd~e~v~V~v~~fg~ 45 (59)
T 2e6z_A 7 GFQPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDL 45 (59)
T ss_dssp SCCTTSEEEECSSTTTTCEEEECCCBTTEEEEEECCSSC
T ss_pred cCCCCCEEEEeecCCCCCEEEEEEEeCCEEEEEEEecCC
Confidence 45888999888884 6788888888877777665554
No 450
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=23.89 E-value=1e+02 Score=30.12 Aligned_cols=46 Identities=22% Similarity=0.343 Sum_probs=29.6
Q ss_pred HHHHHHHHhCCcEEEEecCCC------ChHHHHHHHHHHHHHHhhcCCCcEEEEeecCC
Q 008319 115 EMIWKLAEEGMNVARLNMSHG------DHASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (570)
Q Consensus 115 e~l~~li~~Gm~v~RiN~sHg------~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~G 167 (570)
+.++.|-+.|+|++|+-++.+ ..+.+.++++.. .+. -+.+++|+-+
T Consensus 36 ~~~~~lk~~G~N~VRi~~~~~~~w~~~~~~~ld~~v~~a----~~~---Gi~Vild~h~ 87 (302)
T 1bqc_A 36 QAFADIKSHGANTVRVVLSNGVRWSKNGPSDVANVISLC----KQN---RLICMLEVHD 87 (302)
T ss_dssp THHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHH----HHT---TCEEEEEEGG
T ss_pred HHHHHHHHcCCCEEEEEccCCcccCCCCHHHHHHHHHHH----HHC---CCEEEEEecc
Confidence 678889999999999988643 122333333322 233 3667888753
No 451
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=23.71 E-value=2.6e+02 Score=28.28 Aligned_cols=93 Identities=11% Similarity=0.152 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHhCCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEc
Q 008319 293 KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVAT 372 (570)
Q Consensus 293 ~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaT 372 (570)
+-++.++++.++. .+.++.-+-.++.++ .+.+.+|.+-||-+++ ...+ +++.+.+.||||++.|
T Consensus 99 ~GL~~L~~~~~e~--GLpv~Tev~D~~~v~---~l~~~vd~lkIgA~~~------~n~~-----LLr~va~~gkPVilK~ 162 (298)
T 3fs2_A 99 KALEVFSDLKKEY--GFPVLTDIHTEEQCA---AVAPVVDVLQIPAFLC------RQTD-----LLIAAARTGRVVNVKK 162 (298)
T ss_dssp HHHHHHHHHHHHH--CCCEEEECCSHHHHH---HHTTTCSEEEECGGGT------TCHH-----HHHHHHHTTSEEEEEC
T ss_pred HHHHHHHHHHHhc--CCeEEEEeCCHHHHH---HHHhhCCEEEECcccc------CCHH-----HHHHHHccCCcEEEeC
Confidence 3455667776554 467888776666554 4445599999996655 3344 4555668899999865
Q ss_pred cchhhhhcCCCcChHHHhHHHHHHH-hCccEEEecccc
Q 008319 373 NMLESMIDHPTPTRAEVSDIAIAVR-EGADAVMLSGET 409 (570)
Q Consensus 373 qmLeSM~~~~~PtrAEv~Dv~nav~-~G~D~vmLs~ET 409 (570)
.|. -|..|+...+..+. .|.+-++|..-+
T Consensus 163 Gms--------~t~~ei~~ave~i~~~Gn~~iiL~erg 192 (298)
T 3fs2_A 163 GQF--------LAPWDMKNVLAKITESGNPNVLATERG 192 (298)
T ss_dssp CTT--------CCGGGHHHHHHHHHTTTCCCEEEEECC
T ss_pred CCC--------CCHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 542 35567766777665 477767765433
No 452
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=23.60 E-value=3.2e+02 Score=27.23 Aligned_cols=95 Identities=19% Similarity=0.182 Sum_probs=52.6
Q ss_pred HHHHHh-CCEEEEcCCCcc--cCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHH-HhHHHHHHHhCc
Q 008319 325 HSIISA-SDGAMVARGDLG--AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 400 (570)
Q Consensus 325 deIl~~-sDgImIgrGDLg--~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~ 400 (570)
+-.++. +|||++. |=-| ..+..++-..+.+..++.+ .-..|||.- ....+-+| +.-.-.|-..|+
T Consensus 36 ~~li~~Gv~gl~v~-GtTGE~~~Ls~~Er~~v~~~~~~~~-~grvpviaG---------vg~~~t~~ai~la~~A~~~Ga 104 (309)
T 3fkr_A 36 DFMIDAGSDGLCIL-ANFSEQFAITDDERDVLTRTILEHV-AGRVPVIVT---------TSHYSTQVCAARSLRAQQLGA 104 (309)
T ss_dssp HHHHHTTCSCEEES-SGGGTGGGSCHHHHHHHHHHHHHHH-TTSSCEEEE---------CCCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEC-ccccCcccCCHHHHHHHHHHHHHHh-CCCCcEEEe---------cCCchHHHHHHHHHHHHHcCC
Confidence 333444 8999983 1111 1122223223333333333 124788864 23334445 555667778899
Q ss_pred cEEEecccccC----CCCHHHHHHHHHHHHHHhhc
Q 008319 401 DAVMLSGETAH----GKFPLKAVKVMHTVALRTES 431 (570)
Q Consensus 401 D~vmLs~ETA~----G~yP~eaV~~m~~I~~~aE~ 431 (570)
|++|+..= -. ..-+-+.++....|+..+.-
T Consensus 105 davlv~~P-yy~~~~~~s~~~l~~~f~~va~a~~l 138 (309)
T 3fkr_A 105 AMVMAMPP-YHGATFRVPEAQIFEFYARVSDAIAI 138 (309)
T ss_dssp SEEEECCS-CBTTTBCCCHHHHHHHHHHHHHHCSS
T ss_pred CEEEEcCC-CCccCCCCCHHHHHHHHHHHHHhcCC
Confidence 99999632 11 11257889999999988753
No 453
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=23.56 E-value=1.3e+02 Score=27.96 Aligned_cols=51 Identities=20% Similarity=0.276 Sum_probs=36.6
Q ss_pred cCcchhhhHHHHHHhCCEEEEcCCCcccCCCCCCHHHHHHHHHHHHH-------HcCCCEEEE
Q 008319 316 ESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCR-------SMQKPVIVA 371 (570)
Q Consensus 316 Et~~gv~NldeIl~~sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~-------~~gKPviva 371 (570)
+.++.+..+.+-++.+||++|+--..-- .++...|..+.-+- -.|||+.+.
T Consensus 53 ~~p~~~~~l~~~i~~aD~~ii~tPeYn~-----s~pg~LKn~iDwlsr~~~~~~~~gKpv~~v 110 (190)
T 3u7r_A 53 DAPESVLRLKDRIEHSDAVLAITPEYNR-----SYPGMIKNAIDWATRPYGQNSWKGKPAAVI 110 (190)
T ss_dssp GCCHHHHHHHHHHHTSSEEEEECCCBTT-----BCCHHHHHHHHHHHCSTTCCTTTTCEEEEE
T ss_pred CCCHHHHHHHHHHHhCCcEEEechhhcc-----cCCHHHHHHHHHhcccccCCccCCCEEEEE
Confidence 3567888888889999999997433332 35577787777663 268999764
No 454
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=23.40 E-value=1.4e+02 Score=30.55 Aligned_cols=55 Identities=13% Similarity=0.007 Sum_probs=39.2
Q ss_pred CceEEEeecCcchhhhHHHHHHh--CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEE
Q 008319 308 DIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 370 (570)
Q Consensus 308 ~i~IiaKIEt~~gv~NldeIl~~--sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPviv 370 (570)
.++|+ -=|+......+.++++. +|.+.+-.+-.| | ..--.+|...|+++|.++..
T Consensus 245 ~iPIa-~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~G---G----it~~~~ia~~A~~~gi~~~~ 301 (374)
T 3sjn_A 245 SQKIA-GGESLTTRYEFQEFITKSNADIVQPDITRCG---G----ITEMKKIYDIAQMNGTQLIP 301 (374)
T ss_dssp SSEEE-ECTTCCHHHHHHHHHHHHCCSEECCBTTTSS---H----HHHHHHHHHHHHHHTCEECC
T ss_pred CCCEE-eCCCcCCHHHHHHHHHcCCCCEEEeCccccC---C----HHHHHHHHHHHHHcCCEEEe
Confidence 45554 46787788888888865 899998654443 1 22345889999999999874
No 455
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=23.39 E-value=1.2e+02 Score=29.95 Aligned_cols=22 Identities=27% Similarity=0.385 Sum_probs=19.1
Q ss_pred CCHHHHHHHHHhCCcEEEEecC
Q 008319 112 SSREMIWKLAEEGMNVARLNMS 133 (570)
Q Consensus 112 ~~~e~l~~li~~Gm~v~RiN~s 133 (570)
.+.+.++.|.+.|+|++||-++
T Consensus 29 ~~~~d~~~i~~~G~n~vRi~i~ 50 (343)
T 1ceo_A 29 ITEKDIETIAEAGFDHVRLPFD 50 (343)
T ss_dssp SCHHHHHHHHHHTCCEEEEEEE
T ss_pred cCHHHHHHHHHcCCCEEEecCC
Confidence 4578899999999999999865
No 456
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=23.32 E-value=1.7e+02 Score=29.42 Aligned_cols=103 Identities=14% Similarity=0.180 Sum_probs=64.7
Q ss_pred HHHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEe-ec-CcchhhhHHHHHHh-CCEEEEcCCCcccCCC
Q 008319 270 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVK-IE-SADSIPNLHSIISA-SDGAMVARGDLGAELP 346 (570)
Q Consensus 270 ~~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaK-IE-t~~gv~NldeIl~~-sDgImIgrGDLg~eig 346 (570)
+++.+...+.|+|.|++.-+.+.++++++.+.+ ++++++. +| .....-+.+|+-+. .+.+++++.=+-
T Consensus 170 i~ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~-----~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~~~~~~---- 240 (295)
T 1xg4_A 170 IERAQAYVEAGAEMLFPEAITELAMYRQFADAV-----QVPILANITEFGATPLFTTDELRSAHVAMALYPLSAFR---- 240 (295)
T ss_dssp HHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHH-----CSCBEEECCSSSSSCCCCHHHHHHTTCSEEEESSHHHH----
T ss_pred HHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHc-----CCCEEEEecccCCCCCCCHHHHHHcCCCEEEEChHHHH----
Confidence 344455568999999999998888888888777 3566664 44 13445678888887 899999854331
Q ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHH
Q 008319 347 IEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDI 392 (570)
Q Consensus 347 ~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv 392 (570)
......++..+.-++.|..- ...+.| ++++|+.+.
T Consensus 241 --aa~~a~~~~~~~i~~~g~~~----~~~~~~-----~~~~e~~~l 275 (295)
T 1xg4_A 241 --AMNRAAEHVYNVLRQEGTQK----SVIDTM-----QTRNELYES 275 (295)
T ss_dssp --HHHHHHHHHHHHHHHHSSSG----GGGGGS-----CCHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHhCCcc----cccccC-----CCHHHHHHH
Confidence 12223344555555566542 222333 567776654
No 457
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=23.10 E-value=93 Score=30.30 Aligned_cols=52 Identities=25% Similarity=0.366 Sum_probs=31.7
Q ss_pred CHHHHHHHHHhCCcEEEEecCCC---ChHHHHHHHHHHHHHHhhcCCCcEEEEeecCCC
Q 008319 113 SREMIWKLAEEGMNVARLNMSHG---DHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (570)
Q Consensus 113 ~~e~l~~li~~Gm~v~RiN~sHg---~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~Gp 168 (570)
+.+.++.|-+.|+|++|+-++.| +.+..+ .++.+=+...+ +-+.+++|+-+.
T Consensus 33 ~~~~~~~i~~~G~N~VRi~~~~~~~~~~~~~~-~ld~~v~~a~~---~Gi~Vild~H~~ 87 (294)
T 2whl_A 33 ASTAIPAIAEQGANTIRIVLSDGGQWEKDDID-TIREVIELAEQ---NKMVAVVEVHDA 87 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEEECCSSSSCCCCHH-HHHHHHHHHHT---TTCEEEEEECTT
T ss_pred hHHHHHHHHHcCCCEEEEEecCCCccCccHHH-HHHHHHHHHHH---CCCEEEEEeccC
Confidence 46789999999999999987644 112222 22222222223 447788897654
No 458
>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase C, DNA polymerase III; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A*
Probab=22.99 E-value=4.1e+02 Score=31.52 Aligned_cols=124 Identities=20% Similarity=0.178 Sum_probs=77.5
Q ss_pred HHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcC-------------------------------CCceEEEeecCcc
Q 008319 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCN-------------------------------ADIHVIVKIESAD 319 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~-------------------------------~~i~IiaKIEt~~ 319 (570)
+.++.|.+.|.+.|++.=..+...+.++.+.....| ....++.--++.+
T Consensus 136 eLv~~A~~~G~~aiAITDH~~~~G~~~~~~~a~~~gIk~I~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~hlvlLAkN~~ 215 (1041)
T 3f2b_A 136 KLIEQAKKWGHPAIAVTDHAVVQSFPEAYSAAKKHGMKVIYGLEANIVDDGVPIAYNETHRRLGSGSGPFHVTLLAQNET 215 (1041)
T ss_dssp HHHHHHHHTTCSCEEECCBSCCTTHHHHHHHHHHHTCCEEEEEEEEEECC------------------CEEEEEEECSHH
T ss_pred HHHHHHHHCCCCEEEEecccchhhHHHHHHHHHHCCCEEEEEEEEEEEeCCcccccccccccccccCCCceEEEEeCCHH
Confidence 455788899999999885555544444433322211 0123555556889
Q ss_pred hhhhHHHHHHh--------------------CCEEEEcCCCcccCCCC--------------------------------
Q 008319 320 SIPNLHSIISA--------------------SDGAMVARGDLGAELPI-------------------------------- 347 (570)
Q Consensus 320 gv~NldeIl~~--------------------sDgImIgrGDLg~eig~-------------------------------- 347 (570)
|+.||-.+++. .+|++++.|-+.-++.-
T Consensus 216 Gy~nL~kLvS~a~~~~~~~~pri~~~~L~~~~egLi~~s~c~~Gev~~~l~~~~~~~a~~~~~~y~ylei~~~~~~~~l~ 295 (1041)
T 3f2b_A 216 GLKNLFKLVSLSHIQYFHRVPRIPRSVLVKHRDGLLVGSGCDKGELFDNLIQKAPEEVEDIARFYDFLEVHPPDVYKPLI 295 (1041)
T ss_dssp HHHHHHHHHHHHHTTTCSSSCCEEHHHHHHTCTTEEEECCSSSSSSTTC--------CCTTGGGCSBEEECCGGGGCCC-
T ss_pred HHHHHHHHHHHHHHhcccCCCCcCHHHHHhccCCeEEEcCccccHHHHHHhcCCHHHHHHHHHHhhHHHhcCccccHHHH
Confidence 99999888764 36788876644332211
Q ss_pred --------CCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhC
Q 008319 348 --------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREG 399 (570)
Q Consensus 348 --------~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G 399 (570)
++...+.+.+++.+++.|+|++. |+= .+-..|.+++..|+-.+...|
T Consensus 296 ~~~~~~~~~~~~~~~~~l~~la~~~~~p~VA-T~d----vhy~~~ed~~~~dvL~~~~~~ 350 (1041)
T 3f2b_A 296 EMDYVKDEEMIKNIIRSIVALGEKLDIPVVA-TGN----VHYLNPEDKIYRKILIHSQGG 350 (1041)
T ss_dssp ---CCSCHHHHHHHHHHHHHHHHHTTCCEEE-CCC----BSBSSGGGHHHHHHHHHTTGG
T ss_pred hccCCCcHHHHHHHHHHHHHHHHHcCCCEEE-eCC----ceecCHhhHHHHHHHHhhccc
Confidence 00123457899999999999874 431 445678888888876654433
No 459
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=22.89 E-value=86 Score=26.32 Aligned_cols=41 Identities=10% Similarity=0.132 Sum_probs=29.9
Q ss_pred ChhHHHHHHHHHHHhhcCC-cEEEEcC---------ChHHHHHHHhcCCCCeEEEE
Q 008319 449 HMGDMFAFHSTTMANTLNT-PIIVFTR---------TGSMAVILSHYRPSSTIFAF 494 (570)
Q Consensus 449 ~~~~~ia~~av~~a~~~~a-~Iiv~T~---------sG~tA~~ls~~RP~~pIiav 494 (570)
++.+.| ++.|.+.++ .||+-++ -|+++..+.+.-| |||+.|
T Consensus 97 ~~~~~I----~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvV 147 (147)
T 3hgm_A 97 RPSRTI----VRFARKRECDLVVIGAQGTNGDKSLLLGSVAQRVAGSAH-CPVLVV 147 (147)
T ss_dssp CHHHHH----HHHHHHTTCSEEEECSSCTTCCSCCCCCHHHHHHHHHCS-SCEEEC
T ss_pred CHHHHH----HHHHHHhCCCEEEEeCCCCccccceeeccHHHHHHhhCC-CCEEEC
Confidence 455554 567888888 6666544 2788999999877 999864
No 460
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*
Probab=22.68 E-value=1.2e+02 Score=29.57 Aligned_cols=21 Identities=19% Similarity=0.332 Sum_probs=18.7
Q ss_pred CHHHHHHHHHhCCcEEEEecC
Q 008319 113 SREMIWKLAEEGMNVARLNMS 133 (570)
Q Consensus 113 ~~e~l~~li~~Gm~v~RiN~s 133 (570)
+.+.++.|.+.|+|++|+-++
T Consensus 35 ~~~d~~~l~~~G~n~vR~~i~ 55 (317)
T 3aof_A 35 KDEFFDIIKEAGFSHVRIPIR 55 (317)
T ss_dssp CTHHHHHHHHHTCSEEEECCC
T ss_pred CHHHHHHHHHcCCCEEEEecc
Confidence 578899999999999999866
No 461
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=22.55 E-value=53 Score=29.62 Aligned_cols=59 Identities=19% Similarity=0.282 Sum_probs=40.7
Q ss_pred eeecCCCEEEEEEec--CCCC---ccEEEeccCCccc---ccccCCEEEEeCCeeEEEEEEEeCCeEEE
Q 008319 179 IILKEGQEFNFTIKR--GVST---EDTVSVNYDDFVN---DVEVGDILLVDGGMMSLAVKSKTKDLVKC 239 (570)
Q Consensus 179 i~l~~G~~v~lt~~~--~~~~---~~~i~v~~~~l~~---~v~~Gd~I~iDDG~i~l~V~~~~~~~i~~ 239 (570)
.-++.|++.+|+... .+|. .....++...|.. .+++|+.+.+.+ +..+|+++.++.+..
T Consensus 63 ~gm~~Ge~~~v~ipp~~aYG~~~~~~v~~v~~~~f~~~~~~~~~G~~~~~~~--~~~~V~~v~~~~v~v 129 (151)
T 1ix5_A 63 LDMEVGDEKTVKIPAEKAYGNRNEMLIQKIPRDAFKEADFEPEEGMVILAEG--IPATITEVTDNEVTL 129 (151)
T ss_dssp HTCCTTCCCEEEECTTTSSCSCCSTTBCCEETHHHHTSTTCCCTTEEEESSS--CEEEEEEEETTEEEE
T ss_pred cCCCCCCEEEEEECcHHHCCCCCccEEEEEEHHHcCccCCcccccCEEEECC--eEEEEEEEcCCEEEE
Confidence 356889988888752 2332 2233455555543 589999999887 778899999998764
No 462
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=22.50 E-value=2.6e+02 Score=28.54 Aligned_cols=86 Identities=7% Similarity=0.054 Sum_probs=58.1
Q ss_pred hhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHh--CCEEEEcCCCcccCCCCCCHH
Q 008319 274 KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGAELPIEDVP 351 (570)
Q Consensus 274 ~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~--sDgImIgrGDLg~eig~~~v~ 351 (570)
+..-+.|+++|--|+ .+.++..++++-+.. .++|+ -=|+....+.+.++++. +|+|++.++-+|- +
T Consensus 211 ~~l~~~~i~~iEqP~--~~~~~~~~~~l~~~~--~iPI~-~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GG-------i 278 (384)
T 2pgw_A 211 RKLEKYDIEFIEQPT--VSWSIPAMAHVREKV--GIPIV-ADQAAFTLYDVYEICRQRAADMICIGPREIGG-------I 278 (384)
T ss_dssp HHHGGGCCSEEECCS--CTTCHHHHHHHHHHC--SSCEE-ESTTCCSHHHHHHHHHTTCCSEEEECHHHHTS-------H
T ss_pred HHHHhcCCCEEeCCC--ChhhHHHHHHHHhhC--CCCEE-EeCCcCCHHHHHHHHHcCCCCEEEEcchhhCC-------H
Confidence 334467999998886 345555554433322 46655 45777777888888865 9999997654432 2
Q ss_pred HHHHHHHHHHHHcCCCEEEE
Q 008319 352 LLQEDIIRRCRSMQKPVIVA 371 (570)
Q Consensus 352 ~~qk~Ii~~c~~~gKPviva 371 (570)
.--.+++..|+++|.++.+.
T Consensus 279 t~~~~i~~~A~~~g~~~~~~ 298 (384)
T 2pgw_A 279 QPMMKAAAVAEAAGLKICIH 298 (384)
T ss_dssp HHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHHCCCeEeec
Confidence 23357899999999998874
No 463
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Probab=22.40 E-value=1.1e+02 Score=31.11 Aligned_cols=52 Identities=17% Similarity=0.188 Sum_probs=32.5
Q ss_pred CHHHHHHHH-HhCCcEEEEecCCC------ChHHHHHHHHHHHHHHhhcCCCcEEEEeecCCC
Q 008319 113 SREMIWKLA-EEGMNVARLNMSHG------DHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (570)
Q Consensus 113 ~~e~l~~li-~~Gm~v~RiN~sHg------~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~Gp 168 (570)
+.+.++.|. +.|+|++|+-+..+ +++.+ +.++.+=+...+.+ +.+++|+-+.
T Consensus 55 ~~~d~~~l~~~~G~N~VRip~~~~~~~~~~~~~~l-~~ld~~v~~a~~~G---i~VIld~H~~ 113 (364)
T 1g01_A 55 NENAFVALSNDWGSNMIRLAMYIGENGYATNPEVK-DLVYEGIELAFEHD---MYVIVDWHVH 113 (364)
T ss_dssp SHHHHHHHHTTSCCSEEEEEEESSSSSTTTCTTHH-HHHHHHHHHHHHTT---CEEEEEEECC
T ss_pred CHHHHHHHHHHCCCCEEEEEeeeCCCCCccCHHHH-HHHHHHHHHHHHCC---CEEEEEeccC
Confidence 578899997 89999999987732 23333 23333223333333 6778887763
No 464
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=22.29 E-value=5.3e+02 Score=25.75 Aligned_cols=108 Identities=17% Similarity=0.193 Sum_probs=66.7
Q ss_pred hcCCcEEEecCCCC--------------hhHHHHHHHHHHhcCCCceEEEeecCcchhhhHHHHHHhCCEEEEcCCCccc
Q 008319 278 DNQVDFYAVSFVKD--------------AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGA 343 (570)
Q Consensus 278 ~~gvd~I~~SfV~s--------------a~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDgImIgrGDLg~ 343 (570)
+.|+.+|+-+..+. .+-++.++++.++. .+.++.-+-.++.++-+.+ .+|.+-||-+++
T Consensus 46 ~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~--Glp~~tev~d~~~v~~l~~---~vd~lkIgA~~~-- 118 (288)
T 3tml_A 46 KLNVPFIYKSSYDKANRSSGKSFRGLGMDEGLRILSEVKRQL--GLPVLTDVHSIDEIEQVAS---VVDVLQTPAFLC-- 118 (288)
T ss_dssp HHTCCEEEECBC--------------CHHHHHHHHHHHHHHH--CCCEEEECCSGGGHHHHHH---HCSEEEECGGGT--
T ss_pred HcCCCEEEecccccCCCCCCCCcCCcCHHHHHHHHHHHHHhc--CCeEEEEeCCHHHHHHHHH---hCCEEEECcccc--
Confidence 45888877643321 23455566776554 4678887777776665544 599999996655
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHh-Cc------cEEEecccc
Q 008319 344 ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE-GA------DAVMLSGET 409 (570)
Q Consensus 344 eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~-G~------D~vmLs~ET 409 (570)
...+ +++.+.+.||||++.|.|. -|..|+...+..+.. |. +-++|..=+
T Consensus 119 ----~n~~-----LLr~~a~~gkPVilK~G~~--------~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~erg 174 (288)
T 3tml_A 119 ----RQTD-----FIHACARSGKPVNIKKGQF--------LAPHDMKNVIDKARDAAREAGLSEDRFMACERG 174 (288)
T ss_dssp ----TCHH-----HHHHHHTSSSCEEEECCTT--------CCTTHHHHHHHHHHHHHHTTTCCSCCEEEEECC
T ss_pred ----cCHH-----HHHHHHccCCcEEEeCCCC--------CCHHHHHHHHHHHHHcCCCccCCCCcEEEEeCC
Confidence 2333 3555668999999865532 245566666666653 55 556665333
No 465
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=22.25 E-value=5e+02 Score=26.27 Aligned_cols=119 Identities=12% Similarity=0.171 Sum_probs=74.0
Q ss_pred CCceEEEeecCcchhhhHHHHHHh---------CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccch--
Q 008319 307 ADIHVIVKIESADSIPNLHSIISA---------SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNML-- 375 (570)
Q Consensus 307 ~~i~IiaKIEt~~gv~NldeIl~~---------sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmL-- 375 (570)
..++|..........+.+..-++. ..-+|+ |.| ++|+++=...-+++++.|++.|..|=.==-.+
T Consensus 81 ~~VPVaLHlDHg~~~e~i~~ai~~~~~~~~~~GFtSVMi---DgS-~~p~eENi~~Tk~vv~~ah~~gvsVEaElG~igG 156 (306)
T 3pm6_A 81 ASVPITLHLDHAQDPEIIKRAADLSRSETHEPGFDSIMV---DMS-HFSKEENLRLTRELVAYCNARGIATEAEPGRIEG 156 (306)
T ss_dssp CSSCEEEEEEEECCHHHHHHHHHTC------CCCSEEEE---CCT-TSCHHHHHHHHHHHHHHHHTTTCEEEECSSBCCC
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhhhhccCCCCCCEEEE---eCC-CCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeecc
Confidence 468888888887777666666664 678999 444 46777767788999999999987763100000
Q ss_pred -hhhhcCC---CcChHHHhHHHHHHHhCccEEEecccccCCCCHH----HHHHHHHHHHHHh
Q 008319 376 -ESMIDHP---TPTRAEVSDIAIAVREGADAVMLSGETAHGKFPL----KAVKVMHTVALRT 429 (570)
Q Consensus 376 -eSM~~~~---~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~----eaV~~m~~I~~~a 429 (570)
|.=..+. .-......+...++.-|+|++-.+--|+.|.|+- --...|.+|-..+
T Consensus 157 ~Edgv~~~~~~~~~yT~Peea~~Fv~TgvD~LAvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v 218 (306)
T 3pm6_A 157 GEDGVQDTVDLEGVLTTPEESEEFVATGINWLAPAFGNVHGNYGPRGVQLDYERLQRINEAV 218 (306)
T ss_dssp CBTTBCCCTTCCCBCCCHHHHHHHHTTTCSEECCCSSCCSSCCCTTCCCCCHHHHHHHHHHH
T ss_pred ccCCccccccccccCCCHHHHHHHHHcCCCEEEEEcCccccCcCCCCCccCHHHHHHHHHHh
Confidence 0000000 0001123345566779999999999999999952 2234444554443
No 466
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=22.20 E-value=5.5e+02 Score=25.00 Aligned_cols=48 Identities=13% Similarity=-0.006 Sum_probs=31.5
Q ss_pred HHHHHHHHHHc-CCCEEEEccchhhhhcCCCcChHHHhHHH-HHHHhC-ccEEEecccc
Q 008319 354 QEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIA-IAVREG-ADAVMLSGET 409 (570)
Q Consensus 354 qk~Ii~~c~~~-gKPvivaTqmLeSM~~~~~PtrAEv~Dv~-nav~~G-~D~vmLs~ET 409 (570)
..++++..+++ ++|+++= ..+..+..+..+++ .+...| +|++.+++=|
T Consensus 148 ~~~ii~~vr~~~~~Pv~vK--------~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~ 198 (314)
T 2e6f_A 148 MRTYLQQVSLAYGLPFGVK--------MPPYFDIAHFDTAAAVLNEFPLVKFVTCVNSV 198 (314)
T ss_dssp HHHHHHHHHHHHCSCEEEE--------ECCCCCHHHHHHHHHHHHTCTTEEEEEECCCE
T ss_pred HHHHHHHHHHhcCCCEEEE--------ECCCCCHHHHHHHHHHHHhcCCceEEEEeCCC
Confidence 35666666654 8999872 34444666666655 445679 9999988644
No 467
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=22.17 E-value=1.3e+02 Score=31.06 Aligned_cols=62 Identities=19% Similarity=0.192 Sum_probs=42.4
Q ss_pred CceEEEecCCCCC-CHH----HHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCCcEEEEeec
Q 008319 100 KTKIVCTIGPSTS-SRE----MIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (570)
Q Consensus 100 ~tKIi~TiGPs~~-~~e----~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl 165 (570)
+....+|+|-... +++ ..+++.++|.+.+.+...|++.+.-.+.++.+|++. + ..+.|++|.
T Consensus 148 ~vp~y~~~g~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~av---g-~d~~l~vDa 214 (393)
T 2og9_A 148 SVRCYNTSGGFLHTPIDQLMVNASASIERGIGGIKLKVGQPDGALDIARVTAVRKHL---G-DAVPLMVDA 214 (393)
T ss_dssp EEEEEBCTTCCTTSCHHHHHHHHHHHHHTTCCCEEEECCCSCHHHHHHHHHHHHHHH---C-TTSCEEEEC
T ss_pred ceEEEEECCCcCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHc---C-CCCEEEEEC
Confidence 4455666544322 554 356678899999999999988877778888888753 3 335566774
No 468
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=21.99 E-value=1.3e+02 Score=25.01 Aligned_cols=41 Identities=17% Similarity=0.163 Sum_probs=30.2
Q ss_pred ChhHHHHHHHHHHHhhcCC-cEEEEcCC---------hHHHHHHHhcCCCCeEEEE
Q 008319 449 HMGDMFAFHSTTMANTLNT-PIIVFTRT---------GSMAVILSHYRPSSTIFAF 494 (570)
Q Consensus 449 ~~~~~ia~~av~~a~~~~a-~Iiv~T~s---------G~tA~~ls~~RP~~pIiav 494 (570)
++.+.| ++.|++.++ .||+-++. |+++..+.+.-| |||+.+
T Consensus 86 ~~~~~I----~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvv 136 (137)
T 2z08_A 86 VPAEAI----LQAARAEKADLIVMGTRGLGALGSLFLGSQSQRVVAEAP-CPVLLV 136 (137)
T ss_dssp SHHHHH----HHHHHHTTCSEEEEESSCTTCCSCSSSCHHHHHHHHHCS-SCEEEE
T ss_pred CHHHHH----HHHHHHcCCCEEEECCCCCchhhhhhhccHHHHHHhcCC-CCEEEe
Confidence 455544 677888889 77776552 788999988864 999875
No 469
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_A*
Probab=21.88 E-value=3.2e+02 Score=29.15 Aligned_cols=53 Identities=23% Similarity=0.234 Sum_probs=41.3
Q ss_pred CCCCceEEEecCCCCCCHHHHHHHHHh---------C----CcEEEEecCCCChHHHHHHHHHHHHH
Q 008319 97 ARRKTKIVCTIGPSTSSREMIWKLAEE---------G----MNVARLNMSHGDHASHQKTIDLVKEY 150 (570)
Q Consensus 97 ~~r~tKIi~TiGPs~~~~e~l~~li~~---------G----m~v~RiN~sHg~~e~~~~~i~~ir~~ 150 (570)
..++++|...|-. .-+.+.+++.++. | +|..-|-|..++++....+++.++++
T Consensus 88 ~~np~~ia~eI~D-~~~~~~~~~~~~~~~~~~~~~~g~~~~aD~I~l~~~~~dpe~~~~~Vk~V~e~ 153 (445)
T 2h9a_A 88 FEHPCGLAILVED-TLSEGEIKERVEKINKLVFDRVGQMHSVNLVALKGSSQDAATFAKAVATAREV 153 (445)
T ss_dssp CCSCCEEEEEEET-TSCHHHHHHHHHHHHTCEEEETTEEEECCEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEEEec-CCChHhHHHHHHHhhhHHHHhhcccccCcEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 3557899888844 3456677776664 7 99999999999999998888888865
No 470
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=21.79 E-value=1.1e+02 Score=25.86 Aligned_cols=44 Identities=23% Similarity=0.255 Sum_probs=30.9
Q ss_pred ChhHHHHHHHHHHHhhcCC-cEEEEcC--------ChHHHHHHHhcCCCCeEEEEeCC
Q 008319 449 HMGDMFAFHSTTMANTLNT-PIIVFTR--------TGSMAVILSHYRPSSTIFAFTNQ 497 (570)
Q Consensus 449 ~~~~~ia~~av~~a~~~~a-~Iiv~T~--------sG~tA~~ls~~RP~~pIiavt~~ 497 (570)
++.+.| ++.|.+.++ .||+-++ -|+++..+.+.-| |||+.+-+.
T Consensus 96 ~~~~~I----~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvv~~~ 148 (150)
T 3tnj_A 96 EPREEI----IRIAEQENVDLIVVGSHGRHGLALLLGSTANSVLHYAK-CDVLAVRLR 148 (150)
T ss_dssp CHHHHH----HHHHHHTTCSEEEEEEC--------CCCHHHHHHHHCS-SEEEEEECC
T ss_pred CHHHHH----HHHHHHcCCCEEEEecCCCCCcCeEecchHHHHHHhCC-CCEEEEeCC
Confidence 455555 667888888 6666544 1567888888766 999988654
No 471
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=21.71 E-value=1.3e+02 Score=28.70 Aligned_cols=50 Identities=18% Similarity=0.328 Sum_probs=39.1
Q ss_pred HHHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHH
Q 008319 355 EDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 424 (570)
Q Consensus 355 k~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~ 424 (570)
..+++.++++|++|.+=|- -+..+...++..|+|+|+- +||..+.+.+.+
T Consensus 186 ~~~v~~~~~~G~~v~~WTV-------------n~~~~~~~l~~~GVdgIiT-------D~P~~~~~~l~~ 235 (238)
T 3no3_A 186 PDWVKDCKVLGMTSNVWTV-------------DDPKLMEEMIDMGVDFITT-------DLPEETQKILHS 235 (238)
T ss_dssp TTHHHHHHHTTCEEEEECC-------------CSHHHHHHHHHHTCSEEEE-------SCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEECC-------------CCHHHHHHHHHcCCCEEEC-------CCHHHHHHHHHh
Confidence 5789999999999998651 1234566788999999986 689988887754
No 472
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=21.63 E-value=6.2e+02 Score=25.36 Aligned_cols=119 Identities=9% Similarity=0.042 Sum_probs=68.4
Q ss_pred HHHHHHHHcCCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHHhhcCCCC
Q 008319 356 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPV 435 (570)
Q Consensus 356 ~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~~~~ 435 (570)
-+...|+..|.|+.+. .|..+....+...-..|++.++..... ....+.........+.+...+.
T Consensus 101 alA~~aa~~G~~~~Iv-----------mP~~~~~~k~~~~~~~GA~Vv~v~~~~----~~~~~~~~~~~~~~~~~~~~~~ 165 (344)
T 3vc3_A 101 SMAFMAAMKGYKMVLT-----------MPSYTSLERRVTMRAFGAELILTDPAK----GMGGTVKKAYELLENTPNAHML 165 (344)
T ss_dssp HHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG----HHHHHHHHHHHHHHHSTTEECC
T ss_pred HHHHHHHHcCCcEEEE-----------ECCCChHHHHHHHHHcCCEEEEECCCC----cchHHHHHHHHHHhhccCceec
Confidence 4667889999999875 233333445667778899988763221 1223333333333333222222
Q ss_pred CCCCCCcccCCCCChhHHHH---HHHHHHHhhcC--C-cEEEEcCChHHHHHHH----hcCCCCeEEEEeCCH
Q 008319 436 SITPPTQFSAHKSHMGDMFA---FHSTTMANTLN--T-PIIVFTRTGSMAVILS----HYRPSSTIFAFTNQE 498 (570)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~ia---~~av~~a~~~~--a-~Iiv~T~sG~tA~~ls----~~RP~~pIiavt~~~ 498 (570)
.++ . ++.+.++ --+.++.++++ . .+|+..-+|.++.-++ ...|.+.||++-+..
T Consensus 166 ~~~-~--------np~~~~a~~~t~g~EI~eq~~~~~d~vv~~vGgGG~~~Gi~~~~k~~~p~v~vigVep~~ 229 (344)
T 3vc3_A 166 QQF-S--------NPANTQVHFETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSE 229 (344)
T ss_dssp CTT-T--------CHHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGG
T ss_pred ccc-c--------cchhHHHHHHHHHHHHHHHhCCCceEEEEecCCccchHHHhhhhHhhCCCceEEEEcCCC
Confidence 221 1 2222222 23456667764 2 6788888888765554 458999999998764
No 473
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=21.53 E-value=4.4e+02 Score=26.32 Aligned_cols=154 Identities=15% Similarity=0.117 Sum_probs=83.0
Q ss_pred chhhhHHHHHHh----CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChH-HHhHHH
Q 008319 319 DSIPNLHSIISA----SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRA-EVSDIA 393 (570)
Q Consensus 319 ~gv~NldeIl~~----sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrA-Ev~Dv~ 393 (570)
.|++++++.+.. +|+|++-+|=+. ..... ..++|+|+-...=+|+.. .|.+. -...+-
T Consensus 70 ~gl~~~~~~i~~l~~g~dav~~~~G~~~-------------~~~~~--~~~~~lil~l~~~t~~~~--~~~~~~l~~~ve 132 (295)
T 3glc_A 70 TGLERIDINIAPLFEHADVLMCTRGILR-------------SVVPP--ATNRPVVLRASGANSILA--ELSNEAVALSMD 132 (295)
T ss_dssp TTCTTHHHHTGGGGGGCSEEEECHHHHH-------------HHSCG--GGCCCEEEECEECCCTTS--CTTCCEECSCHH
T ss_pred CchhhhHHHHHHhhcCCCEEEECHhHHh-------------hhccc--cCCccEEEEEcCCCcCCC--CCccchhHHHHH
Confidence 577777665542 789988644221 11111 237888886443334322 23222 245678
Q ss_pred HHHHhCccEEEecccccCCCCHHHHHHHHHHHHHHhhcC-CCCCCCCCC-cccCCCCChhHHHHHHHHHHHhhcCCcEEE
Q 008319 394 IAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESS-LPVSITPPT-QFSAHKSHMGDMFAFHSTTMANTLNTPIIV 471 (570)
Q Consensus 394 nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~-~~~~~~~~~-~~~~~~~~~~~~ia~~av~~a~~~~a~Iiv 471 (570)
.|+..|+|++-+..=.. ..+.-+.++.+..+..+++.+ +.. +... .......+ .+.+ ..++++|.+++|-+|-
T Consensus 133 ~Av~~GAdaV~~~i~~G-s~~~~~~l~~i~~v~~~a~~~Glpv--Iie~~~G~~~~~d-~e~i-~~aariA~elGAD~VK 207 (295)
T 3glc_A 133 DAVRLNSCAVAAQVYIG-SEYEHQSIKNIIQLVDAGMKVGMPT--MAVTGVGKDMVRD-QRYF-SLATRIAAEMGAQIIK 207 (295)
T ss_dssp HHHHTTCSEEEEEECTT-STTHHHHHHHHHHHHHHHHTTTCCE--EEEECC----CCS-HHHH-HHHHHHHHHTTCSEEE
T ss_pred HHHHCCCCEEEEEEECC-CCcHHHHHHHHHHHHHHHHHcCCEE--EEECCCCCccCCC-HHHH-HHHHHHHHHhCCCEEE
Confidence 89999999998752222 345567888888888888754 110 0000 00001112 2333 3577889999995555
Q ss_pred EcCChHHHHHHHhcCCCCeEEEEe
Q 008319 472 FTRTGSMAVILSHYRPSSTIFAFT 495 (570)
Q Consensus 472 ~T~sG~tA~~ls~~RP~~pIiavt 495 (570)
.+-+|.+-+.+...- ++||++.-
T Consensus 208 t~~t~e~~~~vv~~~-~vPVv~~G 230 (295)
T 3glc_A 208 TYYVEKGFERIVAGC-PVPIVIAG 230 (295)
T ss_dssp EECCTTTHHHHHHTC-SSCEEEEC
T ss_pred eCCCHHHHHHHHHhC-CCcEEEEE
Confidence 444443333333222 36777654
No 474
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=21.51 E-value=1.6e+02 Score=28.85 Aligned_cols=53 Identities=13% Similarity=0.186 Sum_probs=27.8
Q ss_pred CceEEE--eecCcchhhhHHHHHHh-CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCC
Q 008319 308 DIHVIV--KIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQK 366 (570)
Q Consensus 308 ~i~Iia--KIEt~~gv~NldeIl~~-sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gK 366 (570)
+++||+ -|-|.+ ++.+.++. +|++++||+=|. +.+-+..+.+.+-......|.
T Consensus 241 ~ipvia~GGI~~~~---d~~~~l~~GAd~V~vg~~~l~---~p~~~~~i~~~l~~~~~~~g~ 296 (311)
T 1ep3_A 241 DIPIIGMGGVANAQ---DVLEMYMAGASAVAVGTANFA---DPFVCPKIIDKLPELMDQYRI 296 (311)
T ss_dssp SSCEEECSSCCSHH---HHHHHHHHTCSEEEECTHHHH---CTTHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEECCcCCHH---HHHHHHHcCCCEEEECHHHHc---CcHHHHHHHHHHHHHHHHcCC
Confidence 577776 343332 33444433 999999997665 323333344444333333443
No 475
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=21.45 E-value=99 Score=27.33 Aligned_cols=42 Identities=5% Similarity=0.052 Sum_probs=31.2
Q ss_pred CCEEE--EcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEc
Q 008319 331 SDGAM--VARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVAT 372 (570)
Q Consensus 331 sDgIm--IgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaT 372 (570)
.|.|+ +|-.|+....+.+++....+++++.+++.|.++++.|
T Consensus 63 pd~Vii~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~vil~~ 106 (190)
T 1ivn_A 63 PRWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQ 106 (190)
T ss_dssp CSEEEEECCTTTTSSSCCHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEEeeccccccCCCHHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 56544 4555776656666777888899999999988888754
No 476
>2egv_A UPF0088 protein AQ_165; RSME, methyltransferase, rRNA modification, PUA domain, M3U, SAM, structural genomics, NPPSFA; HET: SAM; 1.45A {Aquifex aeolicus} PDB: 2egw_A*
Probab=21.42 E-value=1.2e+02 Score=29.15 Aligned_cols=69 Identities=12% Similarity=0.064 Sum_probs=41.3
Q ss_pred ccccCCEEEEeCC---eeEEEEEEEeCCeEEEEEEeCcEeccCcccccCCCc--cCC-CCCChhhHHHhhhhhhcCCcEE
Q 008319 211 DVEVGDILLVDGG---MMSLAVKSKTKDLVKCIVVDGGELKSRRHLNVRGKS--ANL-PSITDKDWEDIKFGVDNQVDFY 284 (570)
Q Consensus 211 ~v~~Gd~I~iDDG---~i~l~V~~~~~~~i~~~v~~gG~l~s~KgIn~p~~~--~~l-p~lt~kD~~dI~~~~~~gvd~I 284 (570)
.+++||.|.+ || ....+|.+++++.+.+++..--.. .. ... ... ..+ |. .++-..-|+.+.+.|++-|
T Consensus 28 Rl~~Gd~v~l-dg~g~~~~a~i~~~~~~~~~~~i~~~~~~-~e-~~~--~i~L~~al~~K-~~r~e~ilqkatELGv~~I 101 (229)
T 2egv_A 28 RIEKDEEFGV-IHEGKIYVCKVRREDKREISCEIVEELET-KL-PPK--DITLYQSVTVD-LKTMDTIVRQATELGVLTF 101 (229)
T ss_dssp TCCTTCCEEE-EETTEEEEEEEEEECSSEEEEEEEEECCC-CC-CSS--EEEEEEECCSS-THHHHHHHHHHHHHTCCEE
T ss_pred cCCCCCEEEE-eCCCCEEEEEEEEecCCEEEEEEEEEecC-CC-CCc--eEEEEEecccC-HHHHHHHHHHHHHhCcCEE
Confidence 4589999998 54 456788889999988887652111 11 110 011 122 22 2333345678999999965
Q ss_pred E
Q 008319 285 A 285 (570)
Q Consensus 285 ~ 285 (570)
.
T Consensus 102 ~ 102 (229)
T 2egv_A 102 V 102 (229)
T ss_dssp E
T ss_pred E
Confidence 3
No 477
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=21.29 E-value=1.8e+02 Score=28.32 Aligned_cols=100 Identities=4% Similarity=-0.139 Sum_probs=61.3
Q ss_pred HHhhhhhhcCCcEEEecCC----CChhHHHHHHHHHHhcCCCceEEE-ee-----cC--------------cchhhhHHH
Q 008319 271 EDIKFGVDNQVDFYAVSFV----KDAKVVHELKDYLKSCNADIHVIV-KI-----ES--------------ADSIPNLHS 326 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV----~sa~dv~~vr~~l~~~~~~i~Iia-KI-----Et--------------~~gv~Nlde 326 (570)
+.++.+.+.|+|+|-+... ....+..++++.+++.|-.+..+- -. .+ .+.++.++.
T Consensus 33 ~~l~~~a~~G~~~VEl~~~~~~~~~~~~~~~~~~~l~~~GL~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 112 (303)
T 3l23_A 33 ANLRKVKDMGYSKLELAGYGKGAIGGVPMMDFKKMAEDAGLKIISSHVNPVDTSISDPFKAMIFKYSKEVTPKIMEYWKA 112 (303)
T ss_dssp HHHHHHHHTTCCEEEECCEETTEETTEEHHHHHHHHHHTTCEEEEEECCCBCTTCSSTTTTBCCSCCTTTHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeccccCcccCCCCHHHHHHHHHHcCCeEEEEecccccccccCcccccccccchhhHHHHHHHHHH
Confidence 5667888999999977642 133467889999988776543221 11 11 234666666
Q ss_pred HHHh-----CCEEEEcCCCcc-cCCCCCCHHHHHHHHHHHHHHcCCC--EEE
Q 008319 327 IISA-----SDGAMVARGDLG-AELPIEDVPLLQEDIIRRCRSMQKP--VIV 370 (570)
Q Consensus 327 Il~~-----sDgImIgrGDLg-~eig~~~v~~~qk~Ii~~c~~~gKP--viv 370 (570)
.++. ++.|.+..+.-. .+-.++.+....+++.+.|.++|.. +.+
T Consensus 113 ~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~~l~~ 164 (303)
T 3l23_A 113 TAADHAKLGCKYLIQPMMPTITTHDEAKLVCDIFNQASDVIKAEGIATGFGY 164 (303)
T ss_dssp HHHHHHHTTCSEEEECSCCCCCSHHHHHHHHHHHHHHHHHHHHTTCTTCEEE
T ss_pred HHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcceEEE
Confidence 6665 667777532110 0001123445567888999999999 765
No 478
>3oru_A DUF1989 family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, metal binding PR; HET: MSE; 1.11A {Ruegeria SP} PDB: 3siy_A*
Probab=21.17 E-value=1.3e+02 Score=29.53 Aligned_cols=55 Identities=16% Similarity=0.172 Sum_probs=37.3
Q ss_pred ceeecCCCEEEEEEecCCCCccEEEeccCCcc--------------cccccCCEEEEeCCeeEEEEEEE
Q 008319 178 PIILKEGQEFNFTIKRGVSTEDTVSVNYDDFV--------------NDVEVGDILLVDGGMMSLAVKSK 232 (570)
Q Consensus 178 ~i~l~~G~~v~lt~~~~~~~~~~i~v~~~~l~--------------~~v~~Gd~I~iDDG~i~l~V~~~ 232 (570)
...|++||.++|+.-++.---..+..|.++.. -.+.+|+.++=|.|+..++|++-
T Consensus 46 s~~v~~Gq~lRI~d~eG~Q~~D~l~~na~d~~Er~s~~~T~~~q~~~~lt~G~~L~S~~gRpl~tIv~D 114 (234)
T 3oru_A 46 AIRMAQGEALMVINRDGSQIGDFWAFVEGDCGEYLSMEHLRPTLRRVSPRPGDVLVSNRRRPILTLLED 114 (234)
T ss_dssp EEEECTTCEEEEECSSSSCCEEEEEEETTEEEEEBCHHHHHHHHTSSSCCTTCEEEBTTSSEEEEEEEE
T ss_pred EEEECCCCEEEEEeCCCCeEEEEEEecCCCCccccCHHHHHHHhccccCCCCCEeEeCCCCeeEEEEcc
Confidence 47899999999986543222223333333222 15688999999999999998864
No 479
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=21.16 E-value=1.4e+02 Score=30.22 Aligned_cols=51 Identities=14% Similarity=0.231 Sum_probs=37.0
Q ss_pred EEEecCC-CCCCHHHHHHHHHhCC---------------------cEEEEecCCCChHHHHHHHHHHHHHHhhc
Q 008319 103 IVCTIGP-STSSREMIWKLAEEGM---------------------NVARLNMSHGDHASHQKTIDLVKEYNSQF 154 (570)
Q Consensus 103 Ii~TiGP-s~~~~e~l~~li~~Gm---------------------~v~RiN~sHg~~e~~~~~i~~ir~~~~~~ 154 (570)
+...+.+ .....+..+.|.+.|+ +.+||+|++ +.++..+.++.++++.+++
T Consensus 368 ~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~-~~e~i~~~l~~l~~~~~~~ 440 (444)
T 3if2_A 368 LWLWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA-DEQTLIDGIKVIGEVVREL 440 (444)
T ss_dssp EEEEETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS-CHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCCCHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC-CHHHHHHHHHHHHHHHHHH
Confidence 3444533 2345666777877775 468999999 9999999999998876543
No 480
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=21.09 E-value=1.2e+02 Score=29.94 Aligned_cols=67 Identities=15% Similarity=0.129 Sum_probs=41.3
Q ss_pred hhHHHhhhhhhc-CCcEEEecCCC---ChhHHHHHHHHHHhcCCCceEEEeecCcchhhhHH---HHHHhCCEEEEcC
Q 008319 268 KDWEDIKFGVDN-QVDFYAVSFVK---DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLH---SIISASDGAMVAR 338 (570)
Q Consensus 268 kD~~dI~~~~~~-gvd~I~~SfV~---sa~dv~~vr~~l~~~~~~i~IiaKIEt~~gv~Nld---eIl~~sDgImIgr 338 (570)
++.++++.+++. |+|+|++..-. ..-|+....+++.....+..+|+ |+ |+.+-+ ...+.+||++||.
T Consensus 158 ~~~eE~~~A~~l~g~~iIGinnr~l~t~~~d~~~~~~l~~~ip~~~~vIa--Es--GI~t~edv~~~~~~a~avLVG~ 231 (251)
T 1i4n_A 158 HSREDLEKVFSVIRPKIIGINTRDLDTFEIKKNVLWELLPLVPDDTVVVA--ES--GIKDPRELKDLRGKVNAVLVGT 231 (251)
T ss_dssp CSHHHHHHHHTTCCCSEEEEECBCTTTCCBCTTHHHHHGGGSCTTSEEEE--ES--CCCCGGGHHHHTTTCSEEEECH
T ss_pred CCHHHHHHHHhcCCCCEEEEeCcccccCCCCHHHHHHHHHhCCCCCEEEE--eC--CCCCHHHHHHHHHhCCEEEEcH
Confidence 466778889999 99999887411 12234455555555555666776 43 343333 3333389999984
No 481
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=21.04 E-value=1.1e+02 Score=30.21 Aligned_cols=53 Identities=19% Similarity=0.199 Sum_probs=33.4
Q ss_pred CCCHHHHHHHH-HhCCcEEEEecCCC------ChHHHHHHHHHHHHHHhhcCCCcEEEEeecCC
Q 008319 111 TSSREMIWKLA-EEGMNVARLNMSHG------DHASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (570)
Q Consensus 111 ~~~~e~l~~li-~~Gm~v~RiN~sHg------~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~G 167 (570)
..+.+.++.|. +.|+|++|+-+... +++ ..+.++.+=+...+.+ +.+++|+-+
T Consensus 43 ~~~~~~~~~l~~~~G~N~VRip~~~~~~~~~~~~~-~~~~ld~~v~~a~~~G---i~Vild~H~ 102 (303)
T 7a3h_A 43 FVNYESMKWLRDDWGINVFRAAMYTSSGGYIDDPS-VKEKVKEAVEAAIDLD---IYVIIDWHI 102 (303)
T ss_dssp GCSHHHHHHHHHHTCCCEEEEEEESSTTSTTTCTT-HHHHHHHHHHHHHHHT---CEEEEEEEC
T ss_pred cCCHHHHHHHHHhcCCCEEEEEEEeCCCCccCCHH-HHHHHHHHHHHHHHCC---CEEEEEecc
Confidence 45678899998 67999999987542 222 3333443333334444 667788755
No 482
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=21.03 E-value=2.4e+02 Score=26.70 Aligned_cols=79 Identities=6% Similarity=0.153 Sum_probs=50.0
Q ss_pred ceEEEeecCcchhhhHHHHHHh-CCEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEccchhhhhcCCCcChH
Q 008319 309 IHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRA 387 (570)
Q Consensus 309 i~IiaKIEt~~gv~NldeIl~~-sDgImIgrGDLg~eig~~~v~~~qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~PtrA 387 (570)
-+||+-|-+. +.++..++. ++.+|+.-||++ -.++++..++++||++++--.+ +..-.+.+.
T Consensus 10 ~piI~Avr~~---~~l~~al~s~~~~ifll~g~i~----------~l~~~v~~lk~~~K~v~Vh~Dl----i~Gls~d~~ 72 (192)
T 3kts_A 10 QSIIPAAHNQ---KDMEKILELDLTYMVMLETHVA----------QLKALVKYAQAGGKKVLLHADL----VNGLKNDDY 72 (192)
T ss_dssp CCEEEEESSS---HHHHHHTTSSCCEEEECSEETT----------THHHHHHHHHHTTCEEEEEGGG----EETCCCSHH
T ss_pred CCEEEEecCH---HHHHHHHcCCCCEEEEecCcHH----------HHHHHHHHHHHcCCeEEEecCc----hhccCCcHH
Confidence 4688866443 445665554 789999777762 3567889999999999984332 333344443
Q ss_pred HHhHHHHHHHhCccEEEec
Q 008319 388 EVSDIAIAVREGADAVMLS 406 (570)
Q Consensus 388 Ev~Dv~nav~~G~D~vmLs 406 (570)
-+.-+.+ ..++|+++-+
T Consensus 73 ai~fL~~--~~~pdGIIsT 89 (192)
T 3kts_A 73 AIDFLCT--EICPDGIIST 89 (192)
T ss_dssp HHHHHHH--TTCCSEEEES
T ss_pred HHHHHHh--CCCCCEEEeC
Confidence 3333332 3468887765
No 483
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=20.84 E-value=1.5e+02 Score=30.08 Aligned_cols=69 Identities=25% Similarity=0.324 Sum_probs=47.2
Q ss_pred CCceEEEec--CCCCC-------CH----HHHHHHHHhCCcEEEEecCC---CC-----hHHHHHHHHHHHHHHhhcCCC
Q 008319 99 RKTKIVCTI--GPSTS-------SR----EMIWKLAEEGMNVARLNMSH---GD-----HASHQKTIDLVKEYNSQFEDK 157 (570)
Q Consensus 99 r~tKIi~Ti--GPs~~-------~~----e~l~~li~~Gm~v~RiN~sH---g~-----~e~~~~~i~~ir~~~~~~~~~ 157 (570)
.+|+|++-+ =|-|- +. +..++|+++|+++.=+|.-- |. .||+.+++..|+.+.++.+
T Consensus 8 ~~~~iMGIlNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~~-- 85 (314)
T 2vef_A 8 AKTVICGIINVTPDSFSDGGQFFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKESD-- 85 (314)
T ss_dssp CCCEEEEEEECCC---------CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHCC--
T ss_pred CCceEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhCC--
Confidence 578888766 34221 12 23578999999999999833 22 2888888888888766543
Q ss_pred cEEEEeecCCCee
Q 008319 158 AVAIMLDTKGPEV 170 (570)
Q Consensus 158 ~i~I~~Dl~Gpki 170 (570)
+.|.+|+.=|++
T Consensus 86 -vpiSIDT~~~~V 97 (314)
T 2vef_A 86 -VLISIDTWKSQV 97 (314)
T ss_dssp -CEEEEECSCHHH
T ss_pred -ceEEEeCCCHHH
Confidence 678889877754
No 484
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=20.83 E-value=2.7e+02 Score=27.68 Aligned_cols=129 Identities=12% Similarity=0.109 Sum_probs=64.4
Q ss_pred HHHHHHHHcCCCEEEEccchhhhhcCCCcC---hHHHhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHHHHhhcC
Q 008319 356 DIIRRCRSMQKPVIVATNMLESMIDHPTPT---RAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESS 432 (570)
Q Consensus 356 ~Ii~~c~~~gKPvivaTqmLeSM~~~~~Pt---rAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~ 432 (570)
-+...|+..|.++.+... ....+. ......+...-..|++.+...++.... ++-.+.+...++..+-...
T Consensus 83 alA~~a~~~G~~~~iv~p------~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~~~~~-~~~~~~~~a~~l~~~~~~~ 155 (338)
T 1tzj_A 83 QVAAVAAHLGMKCVLVQE------NWVNYSDAVYDRVGNIQMSRILGADVRLVPDGFDIG-FRRSWEDALESVRAAGGKP 155 (338)
T ss_dssp HHHHHHHHHTCEEEEEEE------CCSSCCCTTTTTSHHHHHHHHTTCEEEECCC--------CHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHhCCceEEEec------CCCCccccccccCccHHHHHhCCCEEEEeCCcchhh-HHHHHHHHHHHHHhcCCce
Confidence 456678999999877411 111111 000113445566799987764332110 1112344444444332211
Q ss_pred CCCCCC-CCCcccCCCCChhHHHHHHHHHHHhhc-----CC-cEEEEcCChHHHHHHHhc-----CCCCeEEEEeCCH
Q 008319 433 LPVSIT-PPTQFSAHKSHMGDMFAFHSTTMANTL-----NT-PIIVFTRTGSMAVILSHY-----RPSSTIFAFTNQE 498 (570)
Q Consensus 433 ~~~~~~-~~~~~~~~~~~~~~~ia~~av~~a~~~-----~a-~Iiv~T~sG~tA~~ls~~-----RP~~pIiavt~~~ 498 (570)
+....- +.+. .........+.++.+++ .. .||+.+-+|.|+.-++++ .|. .|+++.+..
T Consensus 156 ~~~p~~~~~n~------~~~~g~~t~~~Ei~~q~~~~~~~~d~vv~~vG~GGt~~Gi~~~~k~~g~~~-~vigve~~~ 226 (338)
T 1tzj_A 156 YAIPAGCSDHP------LGGLGFVGFAEEVRAQEAELGFKFDYVVVCSVTGSTQAGMVVGFAADGRAD-RVIGVDASA 226 (338)
T ss_dssp EECCGGGTSST------TTTTHHHHHHHHHHHHHHHHTSCCSEEEEEESSSHHHHHHHHHHHTTTCGG-GEEEEECSS
T ss_pred EEeCCCcCCCc------ccHHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHhhCCCC-eEEEEEccC
Confidence 111111 1111 01111122344555554 34 899999999998888753 688 999999853
No 485
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=20.82 E-value=1.2e+02 Score=30.48 Aligned_cols=49 Identities=16% Similarity=0.145 Sum_probs=37.0
Q ss_pred EEEecCCCCCCHHHHHHHHHhCC-------------cEEEEecCCCChHHHHHHHHHHHHHHh
Q 008319 103 IVCTIGPSTSSREMIWKLAEEGM-------------NVARLNMSHGDHASHQKTIDLVKEYNS 152 (570)
Q Consensus 103 Ii~TiGPs~~~~e~l~~li~~Gm-------------~v~RiN~sHg~~e~~~~~i~~ir~~~~ 152 (570)
+...+. ..+..+..+.|.+.|+ +.+||+|++-+.++..+.++.++++.+
T Consensus 374 ~~~~~~-~~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~~~ 435 (437)
T 3g0t_A 374 FTVGYK-GMDSSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQMLNA 435 (437)
T ss_dssp EEEEET-TCCHHHHHHHHHHTTEECEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHHHHH
T ss_pred EEEecC-CCCHHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 333442 3345667788888876 679999998899999999999988754
No 486
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=20.79 E-value=1.2e+02 Score=31.58 Aligned_cols=21 Identities=19% Similarity=0.446 Sum_probs=18.6
Q ss_pred CHHHHHHHHHhCCcEEEEecC
Q 008319 113 SREMIWKLAEEGMNVARLNMS 133 (570)
Q Consensus 113 ~~e~l~~li~~Gm~v~RiN~s 133 (570)
+.+.++.|.++|+|++||-++
T Consensus 75 te~d~~~i~~~G~N~VRipi~ 95 (408)
T 1h4p_A 75 QEQDFANIASQGFNLVRIPIG 95 (408)
T ss_dssp CHHHHHHHHHTTCCEEEEEEE
T ss_pred CHHHHHHHHHCCCCEEEccCC
Confidence 578899999999999999764
No 487
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=20.73 E-value=61 Score=31.06 Aligned_cols=77 Identities=9% Similarity=0.072 Sum_probs=47.8
Q ss_pred HHhhhhhhcCCcEEEecCCCChhHHHHHHHHHHhcCCCceEE-EeecCcchhhhHHHHHHh-CCEEEEcCCCcccCCCCC
Q 008319 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVI-VKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIE 348 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~SfV~sa~dv~~vr~~l~~~~~~i~Ii-aKIEt~~gv~NldeIl~~-sDgImIgrGDLg~eig~~ 348 (570)
+..+.+.+.|+|++.+| ...++++..+|+.+ +. ..++ .-|--..+ ++.+.++. +|.+++||+=+..+=|.+
T Consensus 119 ~~a~~a~~~G~~GvV~s-at~~~e~~~ir~~~---~~-f~~v~pGI~~~g~--~~~~a~~~Gad~iVvGr~I~~a~dp~~ 191 (215)
T 3ve9_A 119 YLREVARRVNPKGFVAP-ATRPSMISRVKGDF---PD-KLVISPGVGTQGA--KPGIALCHGADYEIVGRSVYQSADPVR 191 (215)
T ss_dssp HHHHHHHHHCCSEEECC-TTSHHHHHHHHHHC---TT-SEEEECCTTSTTC--CTTHHHHTTCSEEEECHHHHTSSSHHH
T ss_pred HHHHHHHHcCCCceeeC-CCCHHHHHHHHHhC---CC-cEEEcCCCCcCcC--CHHHHHHcCCCEEEeCHHHcCCCCHHH
Confidence 44456778899998777 23477888888765 33 3333 45522211 46666666 999999998777654433
Q ss_pred CHHHHH
Q 008319 349 DVPLLQ 354 (570)
Q Consensus 349 ~v~~~q 354 (570)
....++
T Consensus 192 a~~~i~ 197 (215)
T 3ve9_A 192 KLEEIV 197 (215)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 488
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A*
Probab=20.68 E-value=1.9e+02 Score=30.45 Aligned_cols=52 Identities=23% Similarity=0.321 Sum_probs=32.2
Q ss_pred CCCHHHH-HHHHHhCCcEEEEecCCC---------ChHHHHHHHHHHHHHHhhcCCCcEEEEeecC
Q 008319 111 TSSREMI-WKLAEEGMNVARLNMSHG---------DHASHQKTIDLVKEYNSQFEDKAVAIMLDTK 166 (570)
Q Consensus 111 ~~~~e~l-~~li~~Gm~v~RiN~sHg---------~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~ 166 (570)
....+.+ +.|.+.|+|++|+-++.. +.+....+.+.+..+ ++ +-+.+++|+-
T Consensus 65 ~~~~~di~~~l~~~G~N~VRl~v~w~~~~p~~g~~~~~~l~~l~~~v~~a-~~---~Gi~vildlH 126 (481)
T 2osx_A 65 QFTEADLAREYADMGTNFVRFLISWRSVEPAPGVYDQQYLDRVEDRVGWY-AE---RGYKVMLDMH 126 (481)
T ss_dssp SCCHHHHHHHHHHHCCCEEEEEECHHHHCSBTTBCCHHHHHHHHHHHHHH-HH---TTCEEEEEEC
T ss_pred cccHHHHHHHHHHCCCCEEEEeCcHHHcCCCCCCcCHHHHHHHHHHHHHH-HH---CCCEEEEEcc
Confidence 3567888 899999999999987621 122333333333333 33 3467888854
No 489
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=20.60 E-value=2.4e+02 Score=28.22 Aligned_cols=89 Identities=19% Similarity=0.176 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHhcCCCceEEEe-ecCcchhhhHHHHHHh-CCEEEE----c---------CCC--------cccCCCCCC
Q 008319 293 KVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMV----A---------RGD--------LGAELPIED 349 (570)
Q Consensus 293 ~dv~~vr~~l~~~~~~i~IiaK-IEt~~gv~NldeIl~~-sDgImI----g---------rGD--------Lg~eig~~~ 349 (570)
+.+..+++ . +.+|++| |..-...+......+. +|+|.+ | |.. +....+
T Consensus 172 ~~i~~vr~-~-----~~Pv~vK~v~~g~~~e~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~--- 242 (332)
T 1vcf_A 172 ERLAELLP-L-----PFPVMVKEVGHGLSREAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIP--- 242 (332)
T ss_dssp HHHHHHCS-C-----SSCEEEECSSSCCCHHHHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCB---
T ss_pred HHHHHHHc-C-----CCCEEEEecCCCCCHHHHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhcccc---
Q ss_pred HHHHHHHHHHHHHHc-CCCEEEEccchhhhhcCCCcChHHHhHHHHHHHhCccEEEe
Q 008319 350 VPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 405 (570)
Q Consensus 350 v~~~qk~Ii~~c~~~-gKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL 405 (570)
....+.+..+.. +.|+|...-+-. -.|+..++..|+|+|++
T Consensus 243 ---~~~~l~~v~~~~~~ipvia~GGI~~------------~~d~~kal~~GAd~V~i 284 (332)
T 1vcf_A 243 ---TARAILEVREVLPHLPLVASGGVYT------------GTDGAKALALGADLLAV 284 (332)
T ss_dssp ---HHHHHHHHHHHCSSSCEEEESSCCS------------HHHHHHHHHHTCSEEEE
T ss_pred ---HHHHHHHHHHhcCCCeEEEECCCCC------------HHHHHHHHHhCCChHhh
No 490
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=20.32 E-value=6.3e+02 Score=25.46 Aligned_cols=145 Identities=13% Similarity=0.025 Sum_probs=80.4
Q ss_pred HHhhhhhhcCCcEEEec----CCC--C----hhHHHHHHHHHHhcCCCceEEE------------eecC------cchhh
Q 008319 271 EDIKFGVDNQVDFYAVS----FVK--D----AKVVHELKDYLKSCNADIHVIV------------KIES------ADSIP 322 (570)
Q Consensus 271 ~dI~~~~~~gvd~I~~S----fV~--s----a~dv~~vr~~l~~~~~~i~Iia------------KIEt------~~gv~ 322 (570)
+.++.+.+.|+++|-+. +-. + .+++.++++.+++.|-.+.-+. .+-+ ..+++
T Consensus 37 e~l~~aa~~G~~~vEl~~~~~~p~~~~~~e~~~~~~~l~~~l~~~GL~i~~~~~~~~~~p~~~~g~l~~~d~~~r~~~i~ 116 (387)
T 1bxb_A 37 YVVHKLAELGAYGVNLHDEDLIPRGTPPQERDQIVRRFKKALDETGLKVPMVTANLFSDPAFKDGAFTSPDPWVRAYALR 116 (387)
T ss_dssp HHHHHHHHHTCSEEEEEHHHHSCTTCCTTHHHHHHHHHHHHHHHHTCBCCEEECCCSSSGGGGGCSTTCSSHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEecCcccCCCCCChhhhHHHHHHHHHHHHHhCCEEEEEecCCCCCccccCCCCCCCCHHHHHHHHH
Confidence 45677778999999887 432 2 5678899999998887654332 1111 22344
Q ss_pred hHHHHHHh-----CCEEEEcCCCcccCCC--------CCCHHHHHHHHHHHHHHc--CCCEEEEccchhhhhc-----CC
Q 008319 323 NLHSIISA-----SDGAMVARGDLGAELP--------IEDVPLLQEDIIRRCRSM--QKPVIVATNMLESMID-----HP 382 (570)
Q Consensus 323 NldeIl~~-----sDgImIgrGDLg~eig--------~~~v~~~qk~Ii~~c~~~--gKPvivaTqmLeSM~~-----~~ 382 (570)
.+...++. ++.|.+..|--+...+ ++.+....+++...+.+. |..+. +|.+-. ..
T Consensus 117 ~~~~~i~~A~~LGa~~vv~~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~a~~~g~gv~l~-----lE~~~~~~~~~~~ 191 (387)
T 1bxb_A 117 KSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREALNFMAAYAEDQGYGYRFA-----LEPKPNEPRGDIY 191 (387)
T ss_dssp HHHHHHHHHHHHTCCEEEECCTTCEESCGGGCGGGTHHHHHHHHHHHHHHHHHHHTCCCEEE-----ECCCSSSSSSEES
T ss_pred HHHHHHHHHHHhCCCEEEECCCCCCccCCccCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEE-----EecCCCCCCCCcc
Confidence 45544444 6777777662221111 124556667888888887 55443 455432 12
Q ss_pred CcChHHHhHHHHHHHhCccE-EEecccc----cCCCCHHHHHHHH
Q 008319 383 TPTRAEVSDIAIAVREGADA-VMLSGET----AHGKFPLKAVKVM 422 (570)
Q Consensus 383 ~PtrAEv~Dv~nav~~G~D~-vmLs~ET----A~G~yP~eaV~~m 422 (570)
.+|-+++.++.+.+ |.+. +-+.-+| ..|.-|.+.++.+
T Consensus 192 ~~t~~~~~~ll~~v--~~~~~vgl~lD~gH~~~~g~d~~~~l~~~ 234 (387)
T 1bxb_A 192 FATVGSMLAFIHTL--DRPERFGLNPEFAHETMAGLNFVHAVAQA 234 (387)
T ss_dssp SCSHHHHHHHHTTS--SSGGGEEECCBHHHHHHTTCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHc--CCccceEEEEecCcccccCCCHHHHHHHh
Confidence 34444444433222 3333 4444455 3466777666554
No 491
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=20.32 E-value=40 Score=32.71 Aligned_cols=35 Identities=14% Similarity=0.136 Sum_probs=26.0
Q ss_pred HHHHHHhCccEEEecccccCCCCHHHHHHHHHHHH
Q 008319 392 IAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVA 426 (570)
Q Consensus 392 v~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~ 426 (570)
...++..|+|.+....--.....|.++++.+.+.+
T Consensus 201 ~~~a~~aGad~iVvGr~I~~a~dp~~a~~~l~~~i 235 (246)
T 2yyu_A 201 PRKARALGSDYIVIGRSLTRAADPLRTYARLQHEW 235 (246)
T ss_dssp HHHHHHHTCSEEEECHHHHTSSSHHHHHHHHHHHC
T ss_pred HHHHHHcCCCEEEECHhhcCCCCHHHHHHHHHHHH
Confidence 67788999999887644334457999998887644
No 492
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=20.14 E-value=3.7e+02 Score=26.79 Aligned_cols=131 Identities=13% Similarity=0.091 Sum_probs=72.5
Q ss_pred HHHHHHHHHHcCCCEEEEccchhhhhcCCCc-Ch--HH----HhHHHHHHHhCccEEEecccccCCCCHHHHHHHHHHHH
Q 008319 354 QEDIIRRCRSMQKPVIVATNMLESMIDHPTP-TR--AE----VSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVA 426 (570)
Q Consensus 354 qk~Ii~~c~~~gKPvivaTqmLeSM~~~~~P-tr--AE----v~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~ 426 (570)
-.-+...|+..|.++.+.. ....| .. .+ ...+...-..|++.+...++... ..+.++.+.+.++.
T Consensus 81 g~alA~~a~~~G~~~~iv~-------p~~~~~~~~~~~~~~~~~k~~~~~~~GA~v~~~~~~~~~-~~~~~~~~~a~~l~ 152 (341)
T 1f2d_A 81 TRMVAALAAKLGKKCVLIQ-------EDWVPIPEAEKDVYNRVGNIELSRIMGADVRVIEDGFDI-GMRKSFANALQELE 152 (341)
T ss_dssp HHHHHHHHHHHTCEEEEEE-------ECCSCCCGGGTTTTTTSHHHHHHHHTTCEEEECCCCCCS-SCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCceEEEe-------ccCCCccccccccccccccHHHHHhCCCEEEEeCCccch-hHHHHHHHHHHHHH
Confidence 3456778999999987741 11112 00 11 22455667789998877543211 11235566666655
Q ss_pred HHhhc-CCCCCCCCCCcccCCCCChhHHHHHHHHHHHhhcC-----C-cEEEEcCChHHHHHHHh----cCCCCeEEEEe
Q 008319 427 LRTES-SLPVSITPPTQFSAHKSHMGDMFAFHSTTMANTLN-----T-PIIVFTRTGSMAVILSH----YRPSSTIFAFT 495 (570)
Q Consensus 427 ~~aE~-~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~-----a-~Iiv~T~sG~tA~~ls~----~RP~~pIiavt 495 (570)
.+-.. ++...+.+.+. .........+.++.++++ . .||+..-+|.|+.-+++ +.|.+.|++|-
T Consensus 153 ~~~~~~~~i~~~~~~np------~~~~G~~t~~~Ei~~q~~~~~~~~d~vv~~vGtGgt~~Gi~~~~k~~~~~~~vigVe 226 (341)
T 1f2d_A 153 DAGHKPYPIPAGCSEHK------YGGLGFVGFADEVINQEVELGIKFDKIVVCCVTGSTTAGILAGMAQYGRQDDVIAID 226 (341)
T ss_dssp HTTCCEEEECGGGTTST------TTTTHHHHHHHHHHHHHHHHTCCCSEEEEEESSSHHHHHHHHHHGGGTCGGGEEEEE
T ss_pred hcCCcEEEeCCCcCCCC------ccHHHHHHHHHHHHHHHHhcCCCCCEEEEecCchHhHHHHHHHHHhcCCCceEEEEE
Confidence 44321 21111101111 111222333456665553 4 79999999999777664 46899999999
Q ss_pred CCH
Q 008319 496 NQE 498 (570)
Q Consensus 496 ~~~ 498 (570)
+..
T Consensus 227 ~~~ 229 (341)
T 1f2d_A 227 ASF 229 (341)
T ss_dssp CSS
T ss_pred ecC
Confidence 863
No 493
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=20.09 E-value=1.1e+02 Score=28.98 Aligned_cols=49 Identities=14% Similarity=0.225 Sum_probs=29.9
Q ss_pred HHHHHHHHHhCCcEEEEecC-CC----------------ChHHHHHHHHHHHHHHhhcCCCcEEEEeec
Q 008319 114 REMIWKLAEEGMNVARLNMS-HG----------------DHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (570)
Q Consensus 114 ~e~l~~li~~Gm~v~RiN~s-Hg----------------~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl 165 (570)
.+.|+.|-+.|+|+.|+=++ ++ ..+.|.+.++.+=++.++.+ +-+++|+
T Consensus 45 ~~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~G---i~vil~~ 110 (351)
T 3vup_A 45 EPEFKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKYN---ILVFPCL 110 (351)
T ss_dssp HHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHTT---CEEEEEE
T ss_pred HHHHHHHHHcCCcEEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHCC---CeEEEEe
Confidence 34588899999999998432 11 11245555555555555555 5667775
No 494
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=20.06 E-value=95 Score=32.44 Aligned_cols=21 Identities=14% Similarity=0.390 Sum_probs=19.1
Q ss_pred CHHHHHHHHHhCCcEEEEecC
Q 008319 113 SREMIWKLAEEGMNVARLNMS 133 (570)
Q Consensus 113 ~~e~l~~li~~Gm~v~RiN~s 133 (570)
+.+.++.|.++|+|++||-++
T Consensus 75 te~D~~~ik~~G~N~VRipi~ 95 (399)
T 3n9k_A 75 TEQDFKQISNLGLNFVRIPIG 95 (399)
T ss_dssp CHHHHHHHHHTTCCEEEEEEE
T ss_pred cHHHHHHHHHcCCCEEEEccc
Confidence 578899999999999999886
Done!