BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008320
(570 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L4D8|IQD31_ARATH Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana GN=IQD31 PE=1 SV=1
Length = 587
Score = 422 bits (1084), Expect = e-117, Method: Compositional matrix adjust.
Identities = 291/599 (48%), Positives = 369/599 (61%), Gaps = 41/599 (6%)
Query: 1 MGKSPAKWIKTVLFGKKSSKSNAFKGREKVANEKEALVAVKASEADAALDPPLDSHPTRN 60
MGKS KW+K VL GKK+SKS+ K +E+V + KE LV K E+D D P N
Sbjct: 1 MGKS-TKWLKNVLLGKKTSKSSGSKDKERVVSGKEVLVTSKVEESDVVSDLPSFEVAETN 59
Query: 61 TIHRDERRLA------EDKESVDLSLQGSQVTDSQ-ILTLQDASY-DPEKIRQEKAATKA 112
T+ R L E+ ++ L + TDSQ + +QD S D E+I++E AAT
Sbjct: 60 TVDRSGGMLETQNVGPEEISDDEIELPEGKSTDSQNVAPVQDHSLSDAERIQREIAATSV 119
Query: 113 QAVFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVATLGAMLGLVKLQALVRGRKVRHS 172
QA FRGYLARRAF ALKGIIRLQALIRGHLVRRQAVATL +++G+V+LQA RGR++R S
Sbjct: 120 QAAFRGYLARRAFWALKGIIRLQALIRGHLVRRQAVATLFSVMGIVRLQAFARGREIRKS 179
Query: 173 DIGLEVGKTCTPLKLLGKPL-DPIELNLSTRISKLSGSAFISKLLASSPTVLSLHLQYDP 231
DIG++V + C L G L +P + L I KL+ +AF KLLASSP VL +H YD
Sbjct: 180 DIGVQVYRKCRLQLLQGNKLANPTDAYLG--IKKLTANAFAQKLLASSPKVLPVHA-YDT 236
Query: 232 VEPNSVSNWLERWSAFHIWKPAPQPKKVSDSKSQKKHVSAQTLEAETGRPKRSVRRNPAA 291
PNS WLE WSA WKP PQPKK K Q + + +EAE+ +PK+SVR+ PA+
Sbjct: 237 SNPNSNLIWLENWSASCFWKPVPQPKKTISRKPQNRLL----VEAESAKPKKSVRKVPAS 292
Query: 292 NADSISVHSTPEFERSKRSLKKVSSHPAD-PVHENPQSELEKVKRSLRKVHNPLVENSAP 350
N +S SV ++ EFE+ KRS +KVSS + P E+PQ ELEKVKRSLRKVHNP+VE+S
Sbjct: 293 NFESSSVQTSFEFEKPKRSFRKVSSQSIEPPAVEDPQIELEKVKRSLRKVHNPVVESSIQ 352
Query: 351 VQS--EIEIEKPNHSLEKLPTSF--VCHEGLERSLSNSGEKMKKETTLTPSE----LPDV 402
Q E+EKP +EK S + HE E ++ EK K+E + P E L
Sbjct: 353 PQRSPRKEVEKPKLGVEKTRESSYPLVHETAEEPVNVCDEKKKQEISEQPEEEVHALEME 412
Query: 403 ETTPDLVEMNEMSD------VPPGDLAADESKPWMESGGKDETIPMTNGNFEPKEDSTNN 456
TP +E NE D + + A E KP ME K+E P N KE+S
Sbjct: 413 VHTPGPLETNEALDSSLVNQIDSNEKAMVEEKPSMEKDTKEEKTPKPNN----KENSAGK 468
Query: 457 ENNKSSRKAAVLTKQEHAE-NG-LQSSPSLPSYMAATESAKAKLRLQGSPRSS-QDSAEK 513
EN KS +K + +K E E NG ++SPS+PSYM AT+SAKAKLRLQGSP+S+ QD EK
Sbjct: 469 ENQKSRKKGSATSKTEREESNGHHETSPSIPSYMQATKSAKAKLRLQGSPKSAEQDGTEK 528
Query: 514 NSGTRRHSLPSSTNSKISSQSPRTQRVVHAGGK--NKGDKNHFSSREGNAKVTQAEWRR 570
+ RRHSLPS N +I+S SPRT R+ ++G K NK +K SSREGNAK T AE +R
Sbjct: 529 ATVPRRHSLPSPGNGRITSHSPRTTRLANSGDKTGNKKEKPLLSSREGNAKTTPAERKR 587
>sp|Q9FXI5|IQD32_ARATH Protein IQ-DOMAIN 32 OS=Arabidopsis thaliana GN=IQD32 PE=1 SV=3
Length = 794
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 80/148 (54%), Gaps = 20/148 (13%)
Query: 113 QAVFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVATLGAMLGLVKLQALVRGRKVRHS 172
QA RG+LARR K +I+LQA +RGHLVR QA+ +L + +VK+QA+VR R +
Sbjct: 222 QAAVRGFLARRELLRSKKVIKLQAAVRGHLVRSQAMGSLRCVQAIVKMQAMVRAR--HST 279
Query: 173 DIGLEVGKTCTPLKLLGKPLDPIELNLSTRISKLSGSAFISKLLASSPTVLSLHLQYDPV 232
G V T D E N + + KL + F L+ S+P ++++ DP
Sbjct: 280 KDGSRVSATS----------DKSEPNAAAQ--KLLENKFAKHLMESTPKTKPINIKCDPT 327
Query: 233 EPNSVSNWLERWSAFHIWKPAPQPKKVS 260
+P+S NWLERW + P+P+K S
Sbjct: 328 KPSSAWNWLERWMSV------PKPEKTS 349
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 483 SLPSYMAATESAKAKLRLQGSPRSSQDSAEKN--SGTRRHSLPSSTNSKISSQSPRTQR 539
SLP +M T+SAKAK++ SPRSS D E++ S +RHSLP TN K SPR QR
Sbjct: 722 SLPRFMQPTQSAKAKVQEHNSPRSSPDLQERDVVSAKKRHSLPGVTNGK--QVSPRIQR 778
>sp|Q8LPG9|IQD14_ARATH Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1
Length = 668
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 53/75 (70%), Gaps = 2/75 (2%)
Query: 98 YDPEKIR--QEKAATKAQAVFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVATLGAML 155
Y PE Q +ATK Q FRGY+AR++FRALKG++RLQ ++RG+ V+RQ + + M
Sbjct: 312 YRPEPTLPVQHASATKIQGAFRGYMARKSFRALKGLVRLQGVVRGYSVKRQTINAMKYMQ 371
Query: 156 GLVKLQALVRGRKVR 170
+V++Q+ ++ R+++
Sbjct: 372 QVVRVQSQIQSRRIK 386
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 11/59 (18%)
Query: 475 ENGLQSSPSLPSYMAATESAKAKLRLQGSPRSSQDSAEKNSGT-----RRHSLPSSTNS 528
++ L S P PSYMA T SAKAK+R +P+ E+ GT RR S P + ++
Sbjct: 556 DDSLTSCPPFPSYMAPTVSAKAKVRPNSNPK------ERVMGTPVSEKRRMSYPPTQDT 608
>sp|Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1
Length = 454
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 20/169 (11%)
Query: 102 KIRQEKAATKAQAVFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVATLGAMLGLVKLQ 161
K ++E AA Q+ FRG+LARR + ++G RL+ L+ G +V+RQA TL M L ++Q
Sbjct: 104 KSKEEAAAILIQSTFRGHLARRESQVMRGQERLKLLMEGSVVQRQAAITLKCMQTLSRVQ 163
Query: 162 ALVRGRKVR--------HSDIGLEVGKTCTPLKLLG------KPLDPIELNL------ST 201
+ +R R++R H + + K LK G + + +E + +
Sbjct: 164 SQIRSRRIRMSEENQARHKQLLQKHAKELGGLKNGGNWNYSNQSKEQVEAGMLHKYEATM 223
Query: 202 RISKLSGSAFISKLLASSPTVLSLHLQYDPVEPNSVSNWLERWSAFHIW 250
R + AF + S + + + DP P +WLERW A W
Sbjct: 224 RRERALAYAFTHQQNLKSFSKTANPMFMDPSNPTWGWSWLERWMAGRPW 272
>sp|Q6PIF6|MYO7B_HUMAN Unconventional myosin-VIIb OS=Homo sapiens GN=MYO7B PE=2 SV=2
Length = 2116
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 72 DKESVDLSLQGSQVTDSQILTLQDA----SYDPEKIRQEKAATKAQAVFRGYLARRAFR- 126
D + L +Q SQV D L++Q Y E +RQ +AA QA +RGY RR F+
Sbjct: 749 DHQDTLLEVQRSQVLDRAALSIQKVLRGYRYRKEFLRQRRAAVTLQAWWRGYCNRRNFKL 808
Query: 127 ALKGIIRLQALIRGHLVRRQAVATLGAMLGLVKLQALVRGRKVR 170
L G RLQA+ R + RQ A V+LQAL RG VR
Sbjct: 809 ILVGFERLQAIARSQPLARQYQAMRQRT---VQLQALCRGYLVR 849
>sp|Q99MZ6|MYO7B_MOUSE Unconventional myosin-VIIb OS=Mus musculus GN=Myo7b PE=1 SV=3
Length = 2113
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Query: 69 LAEDKESVDLSLQGSQVTDSQILTLQDA----SYDPEKIRQEKAATKAQAVFRGYLARRA 124
+D + L ++ SQ D + +Q Y E +RQ +AA QA +RGY R+
Sbjct: 746 FLKDHQDTVLEIRRSQALDGAAIRIQRVLRGHKYRKEFLRQRRAAVTLQAGWRGYSQRKN 805
Query: 125 FR-ALKGIIRLQALIRGHLVRRQAVATLGAMLGLVKLQALVRGRKVR 170
F+ L G RLQA+ R HL+ RQ A +V+LQA RG VR
Sbjct: 806 FKLILVGFERLQAIARSHLLMRQFQAMRQR---IVQLQARCRGYLVR 849
>sp|Q17LW0|MYO7A_AEDAE Myosin-VIIa OS=Aedes aegypti GN=ck PE=3 SV=1
Length = 2163
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 33/123 (26%)
Query: 73 KESVDLSLQG--SQVTDSQILTLQDA----SYDPEKIRQEKAATKAQAVFRGYLARRA-- 124
K++ DL L+ +V +IL LQ + Y +R +AA Q ++GY R+
Sbjct: 716 KDAHDLFLEQERDRVLTRKILILQRSIRGWVYRRRFLRMRQAAVTIQKFWKGYAQRQRYK 775
Query: 125 ---------------------FRALKG-IIRLQALIRGHLVRRQAVATLGAMLGLVKLQA 162
FR L+G I+RLQA IRG+LVRR+ M ++K+Q+
Sbjct: 776 KMKIGYMRLQALIRSRVLSHRFRHLRGHIVRLQARIRGYLVRREYGL---KMWAVIKIQS 832
Query: 163 LVR 165
VR
Sbjct: 833 HVR 835
>sp|P62285|ASPM_BOVIN Abnormal spindle-like microcephaly-associated protein homolog
(Fragment) OS=Bos taurus GN=ASPM PE=2 SV=1
Length = 3371
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 20/92 (21%)
Query: 103 IRQEKAATKAQAVFRGYLARRAFRALKGI------------IRLQALIRGHLVRRQAVAT 150
+R +KA K Q++ R LAR+ + L+ I I+LQA +RG+LVR+Q
Sbjct: 1608 LRLKKATVKLQSIVRMKLARKQYLHLRAIAQQREEHRRASCIKLQAFLRGYLVRKQVRLQ 1667
Query: 151 LGAMLGLVKLQALVRGRKVRHSDIGLEVGKTC 182
A V LQ+ R RK+R L+ K C
Sbjct: 1668 RKAA---VSLQSYFRMRKMR-----LDYLKVC 1691
Score = 37.7 bits (86), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 15/105 (14%)
Query: 80 LQGSQVTDSQILTLQDASYDPEKIRQE----KAATKAQAVFRGYLARRAF-RALKGIIRL 134
L Q T S ++ LQ A + ++ + K Q+ +R Y +RR F R K ++L
Sbjct: 1558 LASYQKTRSAVIVLQSACRRMQARKKFLHILTSIVKIQSYYRAYASRRKFLRLKKATVKL 1617
Query: 135 QALIRGHLVRRQAVATLGAM---------LGLVKLQALVRGRKVR 170
Q+++R L R+Q + L A+ +KLQA +RG VR
Sbjct: 1618 QSIVRMKLARKQYL-HLRAIAQQREEHRRASCIKLQAFLRGYLVR 1661
Score = 33.9 bits (76), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 13/90 (14%)
Query: 91 LTLQDASYDPEKIR-----QEKAATKAQAVFRGYLARRAFRA-LKGIIRLQALIRGH--- 141
+T A+Y K+R Q AA K QA FRGY R +++ L+ +++Q R H
Sbjct: 1721 VTYLQATYRGYKVRRQLQQQSAAALKIQAAFRGYRQRTKYQSVLQSALKIQRWYRTHKTV 1780
Query: 142 -LVRRQAVATLGAMLGLVKLQALVRGRKVR 170
+R T A + LQ+ RG KVR
Sbjct: 1781 SAIRSHFFKTRTAAIS---LQSAYRGWKVR 1807
Score = 33.1 bits (74), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 102 KIRQEKAAT-KAQAVFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVATLGAM 154
K R+ K +T K QAV+R + AR+ R +K R+QA R RR+ +A L A+
Sbjct: 2843 KFRELKDSTIKIQAVWRRHKARKYLREVKAACRIQAWYRCWKARREYLAVLRAV 2896
>sp|P62297|ASPM_SHEEP Abnormal spindle-like microcephaly-associated protein homolog
(Fragment) OS=Ovis aries GN=ASPM PE=2 SV=1
Length = 3374
Score = 40.0 bits (92), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 20/92 (21%)
Query: 103 IRQEKAATKAQAVFRGYLARRAFRALKGI------------IRLQALIRGHLVRRQAVAT 150
+R +KA K Q++ R AR+ + L+ I I+LQA +RG+LVR+Q
Sbjct: 1611 LRLKKATVKLQSIVRMKQARKQYLHLRAIAQQREEHLRASCIKLQAFLRGYLVRKQVRLQ 1670
Query: 151 LGAMLGLVKLQALVRGRKVRHSDIGLEVGKTC 182
A V LQ+ R RK+R LE K C
Sbjct: 1671 RKAA---VLLQSYFRMRKMR-----LEYLKVC 1694
Score = 36.6 bits (83), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 15/105 (14%)
Query: 80 LQGSQVTDSQILTLQDASYDPEKIRQE----KAATKAQAVFRGYLARRAF-RALKGIIRL 134
L Q T S ++ LQ A + ++ A K Q+ +R Y +RR F R K ++L
Sbjct: 1561 LASYQKTRSAVIVLQSACRRMQARKKFLHILTAVVKIQSYYRAYASRRKFLRLKKATVKL 1620
Query: 135 QALIRGHLVRRQAVATLGAM---------LGLVKLQALVRGRKVR 170
Q+++R R+Q + L A+ +KLQA +RG VR
Sbjct: 1621 QSIVRMKQARKQYL-HLRAIAQQREEHLRASCIKLQAFLRGYLVR 1664
Score = 32.3 bits (72), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 15/91 (16%)
Query: 91 LTLQDASYDPEKIR-----QEKAATKAQAVFRGYLARRAFRA-LKGIIRLQALIRGHLVR 144
+T A+Y K+R Q AA K QA FRGY R +++ L+ +++Q R
Sbjct: 1724 VTCLQAAYRGYKVRRQLQQQSAAALKIQAAFRGYRQRTKYQSMLQSALKIQRWYRT---- 1779
Query: 145 RQAVATLGAML-----GLVKLQALVRGRKVR 170
R+ V+ L + + LQ+ RG KVR
Sbjct: 1780 RKMVSALRSHFFKTRTAAISLQSAYRGWKVR 1810
>sp|Q9QY06|MYO9B_MOUSE Unconventional myosin-IXb OS=Mus musculus GN=Myo9b PE=1 SV=2
Length = 2114
Score = 39.7 bits (91), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 103 IRQEKAATKAQAVFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVATLGAMLGLVKLQA 162
++ + AA QA +R Y RRA + + LQA RG+L R+ A +++LQ+
Sbjct: 977 VQMKHAALTIQACWRSYRVRRALERTQAAVYLQAAWRGYLQRQ---AYHHQRHSIIRLQS 1033
Query: 163 LVRGRKVRHS 172
L RG R S
Sbjct: 1034 LCRGHLQRRS 1043
>sp|Q9WTI7|MYO1C_MOUSE Unconventional myosin-Ic OS=Mus musculus GN=Myo1c PE=1 SV=2
Length = 1063
Score = 39.3 bits (90), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 96 ASYDPEKIRQEKAATKAQAVFRGYLARRAF-RALKGIIRLQALIRGHLVRRQAVATLGAM 154
A+ D ++R++ ATK QA +RG+ R+ F R + I +Q+ RG L RR+A A
Sbjct: 725 ATEDSLEVRRQSLATKIQAAWRGFHWRQKFLRVKRSAICIQSWWRGTLGRRKAAKRKWAA 784
Query: 155 LGLVKLQALVRGRKVRHS 172
++ L+RG +RHS
Sbjct: 785 ---QTIRRLIRGFILRHS 799
>sp|O00159|MYO1C_HUMAN Unconventional myosin-Ic OS=Homo sapiens GN=MYO1C PE=1 SV=4
Length = 1063
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 96 ASYDPEKIRQEKAATKAQAVFRGYLARRAF-RALKGIIRLQALIRGHLVRRQAVATLGAM 154
A+ D ++R++ ATK QA +RG+ R+ F R + I +Q+ RG L RR+A A
Sbjct: 725 ATEDALEVRRQSLATKIQAAWRGFHWRQKFLRVKRSAICIQSWWRGTLGRRKAAKRKWAA 784
Query: 155 LGLVKLQALVRGRKVRHS 172
++ L+RG +RH+
Sbjct: 785 ---QTIRRLIRGFVLRHA 799
>sp|Q27966|MYO1C_BOVIN Unconventional myosin-Ic OS=Bos taurus GN=MYO1C PE=1 SV=3
Length = 1063
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 96 ASYDPEKIRQEKAATKAQAVFRGYLARRAF-RALKGIIRLQALIRGHLVRRQAVATLGAM 154
A+ D +IR++ ATK QA +RG+ R+ F R + I +Q+ RG L RR+A A
Sbjct: 725 ATEDALEIRRQSLATKIQATWRGFHCRQKFLRVKRSAICIQSWWRGTLGRRKAAKRKWAA 784
Query: 155 LGLVKLQALVRGRKVRHS 172
++ L++G +RH+
Sbjct: 785 ---QTIRRLIQGFILRHA 799
>sp|Q63355|MYO1C_RAT Unconventional myosin-Ic OS=Rattus norvegicus GN=Myo1c PE=2 SV=2
Length = 1044
Score = 38.5 bits (88), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 96 ASYDPEKIRQEKAATKAQAVFRGYLARRAF-RALKGIIRLQALIRGHLVRRQAVATLGAM 154
A+ D ++R++ ATK QA +RG+ R+ F R + I +Q+ RG L RR+A A
Sbjct: 706 ATEDSLEVRRQSLATKIQAAWRGFHWRQKFLRVKRSAICIQSWWRGTLGRRKAAKRKWAA 765
Query: 155 LGLVKLQALVRGRKVRHS 172
++ L+RG +RH+
Sbjct: 766 ---QTIRRLIRGFILRHA 780
>sp|O23463|CMTA5_ARATH Calmodulin-binding transcription activator 5 OS=Arabidopsis
thaliana GN=CMTA5 PE=2 SV=2
Length = 923
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 91 LTLQDASYDPEKIRQEKAATKAQAVFRGYLARRAFRAL-KGIIRLQALIRGHLVRRQAVA 149
+ +Q A + E R+ AA + Q F+ + RR F + K IR+QA RG VRRQ
Sbjct: 762 MKIQHAFRNFEVRRKIAAAARIQYRFQTWKMRREFLNMRKKAIRIQAAFRGFQVRRQ-YQ 820
Query: 150 TLGAMLGLVKLQALVRGRKVRHSDIGLEVGK 180
+ +G+++ +A++R R R GL+V +
Sbjct: 821 KITWSVGVLE-KAILRWRLKRKGFRGLQVSQ 850
>sp|Q63358|MYO9B_RAT Unconventional myosin-IXb OS=Rattus norvegicus GN=Myo9b PE=1 SV=1
Length = 1980
Score = 38.1 bits (87), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 103 IRQEKAATKAQAVFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVATLGAMLGLVKLQA 162
++ + AA QA +R Y RR + + LQA RG+L R+ A +++LQ+
Sbjct: 978 VQMKHAALTIQACWRSYRVRRTLERTRAAVYLQAAWRGYLQRQ---AYHHQRHSIIRLQS 1034
Query: 163 LVRGRKVRHS 172
L RG R S
Sbjct: 1035 LCRGHLQRRS 1044
>sp|Q5ZLA6|MYO1C_CHICK Unconventional myosin-Ic OS=Gallus gallus GN=MYO1C PE=2 SV=1
Length = 1028
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 96 ASYDPEKIRQEKAATKAQAVFRGYLARRAFRALK-GIIRLQALIRGHLVRRQA 147
A+ D ++R++ ATK QA +RG+ R+ F +K I +Q+ RG L RR+A
Sbjct: 690 ATEDALEVRKQSLATKMQATWRGFYRRKKFLHMKHSAIAIQSWWRGTLGRRKA 742
>sp|P62288|ASPM_FELCA Abnormal spindle-like microcephaly-associated protein homolog
(Fragment) OS=Felis catus GN=ASPM PE=2 SV=1
Length = 3461
Score = 36.2 bits (82), Expect = 0.68, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 91 LTLQDASYDPEKIRQ-----EKAATKAQAVFRGYLARRAFR-ALKGIIRLQALIRGH-LV 143
+T A+Y K+RQ AA K Q FRGY R+ ++ L+ I++Q R + V
Sbjct: 1806 VTCVQAAYRGYKVRQLIKQQSIAALKIQTAFRGYSKRKKYQYVLQSTIKIQTWYRTYRTV 1865
Query: 144 RRQAVATLGAMLGLVKLQALVRGRKVR 170
R + L ++ LQ+ RG KVR
Sbjct: 1866 RDVRMQFLKTKAAVISLQSAYRGWKVR 1892
Score = 33.1 bits (74), Expect = 5.9, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 31/122 (25%)
Query: 79 SLQGSQVTDSQILTLQDASYDPEKIRQE-----KAATKAQAVFRGYLARRAFRALK-GII 132
+L Q T S ++ LQ A Y + R++ + K Q+ +R Y++R+ F LK +
Sbjct: 1626 ALASYQKTRSAVIVLQSA-YRGMQARRKFIHILTSIIKIQSYYRAYISRKKFLRLKHATV 1684
Query: 133 RLQALIRGHLVRRQAVATLGAML------------------------GLVKLQALVRGRK 168
+LQ++++ R+Q + A L +KLQA VRG
Sbjct: 1685 KLQSIVKMKQTRKQYLHLRAATLFIQQWYRSIKVAALKREEYVQMRESCIKLQAFVRGHL 1744
Query: 169 VR 170
VR
Sbjct: 1745 VR 1746
>sp|Q8C170|MYO9A_MOUSE Unconventional myosin-IXa OS=Mus musculus GN=Myo9a PE=1 SV=2
Length = 2542
Score = 36.2 bits (82), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 15/91 (16%)
Query: 107 KAATKAQAVFRGYLARRAFRALKG-IIRLQALIRGHLVRRQAVATLGAMLGLVKLQALVR 165
KAAT Q+ +RGY R+ ++ + II LQ++ RG R++ A +K + L R
Sbjct: 1118 KAATCIQSRWRGYRQRKKYKEQRNKIILLQSIYRGFRARQRCNA--------LKEEKL-R 1168
Query: 166 GRKVRHSDIGLEVGKTCTPLKLLGKPLDPIE 196
K+ H GL K C PL++ G DP E
Sbjct: 1169 EAKLEH---GLVHVKACGPLEIQGS--DPSE 1194
>sp|Q17QH9|IQCD_BOVIN IQ domain-containing protein D OS=Bos taurus GN=IQCD PE=2 SV=1
Length = 444
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 46 DAALDPPLDSHPTRNTIHRDER-RLAEDKESVDLSLQ-GSQV-TDSQILTLQDASYDPEK 102
D+ + D + + IH++E+ +L E K+ D+ ++ SQ+ + +ILT + + E
Sbjct: 338 DSEMSEKQDEYEELDIIHKEEQLQLEELKKRHDVLVEEFSQIQAEREILTKKRLEDEQEM 397
Query: 103 IRQEKAATKAQAVFRGYLAR 122
+R +AAT QA+++GYL R
Sbjct: 398 VRMVRAATLIQALWKGYLVR 417
>sp|Q9D3V1|IQCD_MOUSE IQ domain-containing protein D OS=Mus musculus GN=Iqcd PE=2 SV=1
Length = 458
Score = 33.5 bits (75), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 46 DAALDPPLDSHPTRNTIHRDER-RLAEDKES-VDLSLQGSQV-TDSQILTLQDASYDPEK 102
D + D + +IH++E+ +L E +E L + SQ+ +S+I + + + E
Sbjct: 335 DMEMGEKQDEYEDLESIHKEEKLQLEELRERHAVLVEEFSQIRAESEINSKKRVEAEREM 394
Query: 103 IRQEKAATKAQAVFRGYLARRAFRA 127
+R +AAT QAV++GYL R R+
Sbjct: 395 VRMVRAATLIQAVWKGYLVRSILRS 419
>sp|Q5XIR6|IQCD_RAT IQ domain-containing protein D OS=Rattus norvegicus GN=Iqcd PE=2
SV=2
Length = 457
Score = 33.1 bits (74), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 46 DAALDPPLDSHPTRNTIHRDER-RLAEDKE-SVDLSLQGSQV-TDSQILTLQDASYDPEK 102
D ++ + + TIH++E+ +L E KE L + SQ+ +S+I + + + E
Sbjct: 335 DMEMNEKQEEYEDLETIHKEEKLQLEELKERHAVLVEEFSQIRAESEINSKKRVEAEREM 394
Query: 103 IRQEKAATKAQAVFRGYLAR 122
+R +AAT QA+++GYL R
Sbjct: 395 VRMVRAATLIQAMWKGYLVR 414
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.308 0.124 0.343
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 206,680,131
Number of Sequences: 539616
Number of extensions: 8599957
Number of successful extensions: 27129
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 401
Number of HSP's that attempted gapping in prelim test: 26311
Number of HSP's gapped (non-prelim): 1108
length of query: 570
length of database: 191,569,459
effective HSP length: 123
effective length of query: 447
effective length of database: 125,196,691
effective search space: 55962920877
effective search space used: 55962920877
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 64 (29.3 bits)