Citrus Sinensis ID: 008324
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 570 | 2.2.26 [Sep-21-2011] | |||||||
| Q9XGY7 | 493 | Alcohol-forming fatty acy | N/A | no | 0.838 | 0.969 | 0.556 | 1e-162 | |
| Q93ZB9 | 493 | Fatty acyl-CoA reductase | yes | no | 0.842 | 0.973 | 0.523 | 1e-154 | |
| Q9LXN3 | 493 | Probable fatty acyl-CoA r | no | no | 0.833 | 0.963 | 0.503 | 1e-143 | |
| Q39152 | 491 | Fatty acyl-CoA reductase | no | no | 0.829 | 0.963 | 0.509 | 1e-142 | |
| Q0WRB0 | 496 | Probable fatty acyl-CoA r | no | no | 0.838 | 0.963 | 0.495 | 1e-138 | |
| Q1PEI6 | 496 | Fatty acyl-CoA reductase | no | no | 0.833 | 0.957 | 0.481 | 1e-128 | |
| Q08891 | 616 | Fatty acyl-CoA reductase | no | no | 0.828 | 0.766 | 0.380 | 1e-90 | |
| Q9FMQ9 | 409 | Putative fatty acyl-CoA r | no | no | 0.610 | 0.850 | 0.416 | 1e-83 | |
| B9TSP7 | 548 | Fatty acyl-CoA reductase | no | no | 0.814 | 0.846 | 0.336 | 3e-78 | |
| A1ZAI5 | 625 | Putative fatty acyl-CoA r | yes | no | 0.756 | 0.689 | 0.273 | 5e-42 |
| >sp|Q9XGY7|FAR_SIMCH Alcohol-forming fatty acyl-CoA reductase OS=Simmondsia chinensis PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 572 bits (1473), Expect = e-162, Method: Compositional matrix adjust.
Identities = 270/485 (55%), Positives = 358/485 (73%), Gaps = 7/485 (1%)
Query: 2 ELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNE 61
E+GS++EFL+NK ILV+G TG +AK+F+EK+LR QPNVKKLYL +RA D ++AALR QNE
Sbjct: 3 EMGSILEFLDNKAILVTGATGSLAKIFVEKVLRSQPNVKKLYLLLRATDDETAALRLQNE 62
Query: 62 VLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSA 121
V K++F VLK+ G SF+SEK+T VPGDI+ EDL LKD NLKEE+W E+D++VN A
Sbjct: 63 VFGKELFKVLKQNLGANFYSFVSEKVTVVPGDITGEDLCLKDVNLKEEMWREIDVVVNLA 122
Query: 122 AITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP---- 177
A F ERYDV+ INT G ++++FAKKC KLK+FVHVSTAYV+GE+ GLILE P
Sbjct: 123 ATINFIERYDVSLLINTYGAKYVLDFAKKCNKLKIFVHVSTAYVSGEKNGLILEKPYYMG 182
Query: 178 --LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235
L+G GLD + E K+++ K+NEL+ GA +K I MK++G ERA+ GWPN YVFTK
Sbjct: 183 ESLNGRLGLDINVEKKLVEAKINELQAAGATEKSIKSTMKDMGIERARHWGWPNVYVFTK 242
Query: 236 TMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGE 295
+GEML+ Q K ++ L IIRPT+++ T+KEPFPGWVE ++TI+ + V +G LRC++
Sbjct: 243 ALGEMLLMQYKGDIPLTIIRPTIITSTFKEPFPGWVEGVRTIDNVPVYYGKGRLRCMLCG 302
Query: 296 TKVIMDVIPVDMVVNAMIVAMVAHAKQPS-DANIYHVGSSLRNPVTLVSILDYGFVYFTK 354
I+D+IP DMVVNA IVAMVAHA Q + YHVGSS NP+ L ++ + YFTK
Sbjct: 303 PSTIIDLIPADMVVNATIVAMVAHANQRYVEPVTYHVGSSAANPMKLSALPEMAHRYFTK 362
Query: 355 KPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQVANTVFHNFFKGVYNDLRK 414
PWIN PV V + ++FSS ++FH Y+ + +LLPLK L++ANT+F +FKG Y DL++
Sbjct: 363 NPWINPDRNPVHVGRAMVFSSFSTFHLYLTLNFLLPLKVLEIANTIFCQWFKGKYMDLKR 422
Query: 415 KVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYFMNT 474
K + ++R+V+IYKPY +F GIFDD NTEKLR+ A+ S E D+FYFDP +I W DYF+ T
Sbjct: 423 KTRLLLRLVDIYKPYLFFQGIFDDMNTEKLRIAAKESIVEADMFYFDPRAINWEDYFLKT 482
Query: 475 HIPGV 479
H PGV
Sbjct: 483 HFPGV 487
|
NADPH-dependent alcohol-forming fatty acyl-coenzyme A reductase that catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The recombinant enzyme accepts saturated and mono-unsaturated fatty acyl-CoAs of 16 to 22 carbons. Simmondsia chinensis (taxid: 3999) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 8EC: 4 |
| >sp|Q93ZB9|FACR3_ARATH Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana GN=FAR3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 545 bits (1404), Expect = e-154, Method: Compositional matrix adjust.
Identities = 255/487 (52%), Positives = 354/487 (72%), Gaps = 7/487 (1%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
ME+ SV+++L+NK+ILV G GF+A +F+EKILRV PNVKKLYL +RA+ SA RF +
Sbjct: 5 MEVVSVLKYLDNKSILVVGAAGFLANIFVEKILRVAPNVKKLYLLLRASKGKSATQRFND 64
Query: 61 EVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120
E+L KD+F VLKEK+G LN SEKIT V GDI EDLGL+D +L E+ +++D +VN
Sbjct: 65 EILKKDLFKVLKEKYGPNLNQLTSEKITIVDGDICLEDLGLQDFDLAHEMIHQVDAIVNL 124
Query: 121 AAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP--- 177
AA TKFDERYDVA GINTLG ++++NFAK+C K+K+ VHVSTAYV GE++GLI+E P
Sbjct: 125 AATTKFDERYDVALGINTLGALNVLNFAKRCAKVKILVHVSTAYVCGEKSGLIMETPYRM 184
Query: 178 ---LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234
L+G +GLD + E K++ +KL++L+ GA + IT MK+LG RAK++GWPNTYVFT
Sbjct: 185 GETLNGTTGLDINYEKKLVQEKLDQLRVIGAAPETITETMKDLGLRRAKMYGWPNTYVFT 244
Query: 235 KTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG 294
K MGEM++ +ENLSLV++RP++++ T+KEPFPGW E ++TI++L V +G L C +
Sbjct: 245 KAMGEMMVGTKRENLSLVLLRPSIITSTFKEPFPGWTEGIRTIDSLAVGYGKGKLTCFLC 304
Query: 295 ETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354
+ + DV+P DMVVN+++V+M A A + + IYHVGSSLRNP+ + + YF+
Sbjct: 305 DLDAVSDVMPADMVVNSILVSMAAQAGKQEEI-IYHVGSSLRNPMKNSKFPELAYRYFSI 363
Query: 355 KPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQVANTVFHNFFKGVYNDLRK 414
KPW NK+GK VKV I + SS+ SFH YM IRYL+ LKGL++ N + F+ + K
Sbjct: 364 KPWTNKEGKVVKVGAIEILSSMRSFHRYMTIRYLIALKGLELVNIILCKLFEKEFQYFNK 423
Query: 415 KVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYFMNT 474
K+ F+ R+V++Y+PY +F GIFDD+NTEKLR + E ++FYFDP ++W DYF+NT
Sbjct: 424 KINFIFRLVDLYQPYLFFYGIFDDSNTEKLRKMVSKTGVENEMFYFDPKVLDWDDYFLNT 483
Query: 475 HIPGVEK 481
H+ G+ K
Sbjct: 484 HVIGLLK 490
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C24:0 and C26:0. May be unable to use saturated and monounsaturated C16 and C18 acyl-CoA as substrates. Involved in cuticular wax formation. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q9LXN3|FACR4_ARATH Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana GN=FAR4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 509 bits (1311), Expect = e-143, Method: Compositional matrix adjust.
Identities = 243/483 (50%), Positives = 339/483 (70%), Gaps = 8/483 (1%)
Query: 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLA 64
+ ++FL +KTILV+GV GF+AKVF+EKILR+QP VKKL+L +RAAD +SA RF +EVL
Sbjct: 4 NCIQFLHDKTILVTGVPGFLAKVFVEKILRIQPKVKKLFLLLRAADNESAMQRFHSEVLE 63
Query: 65 KDVFNVLKEKWGTR-LNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAI 123
KD+F VLK G L +FI+EK+ +PGDIS ++LG+K S+L + +WNE+DI+VN AA
Sbjct: 64 KDLFRVLKNALGDENLKAFITEKVVPIPGDISVDNLGVKGSDLLQHMWNEIDIIVNVAAT 123
Query: 124 TKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILE------NP 177
T FDERYDV +NT G ++++NFAKKCVK ++ +HVSTAYV GE++GL+ E
Sbjct: 124 TNFDERYDVGLSVNTFGPLNVLNFAKKCVKGQLLLHVSTAYVRGEKSGLLHEKTFHMGET 183
Query: 178 LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237
L+G L + EM+++ QKL EL+ + ++EI+ MK+LG RAKLHGWPNTYVFTK+M
Sbjct: 184 LNGHRKLVIETEMELMKQKLKELQKQNCSEEEISQSMKDLGMSRAKLHGWPNTYVFTKSM 243
Query: 238 GEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETK 297
GEML+ +ENL +VIIRPT+++ T+ EPFPGW+E L+TI+++ VA +G L+C + +
Sbjct: 244 GEMLLGNYRENLPIVIIRPTMITSTFSEPFPGWIEGLRTIDSVIVAYGKGRLKCFLADPN 303
Query: 298 VIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPW 357
++D+IPVDMV NAM+ A HA + +YHVGSS +NP+T I D YFTK P
Sbjct: 304 SVLDLIPVDMVANAMVTAAAIHAGKLGSQTVYHVGSSCKNPITFEQIHDLAASYFTKNPL 363
Query: 358 INKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQVANTVFHNFFKGVYNDLRKKVK 417
+ + G + VSK + S++A F YM +RY LPL+ L++ ++ + Y D+ +K+K
Sbjct: 364 VRRDGSSILVSKGTILSTMAQFSFYMTLRYKLPLQMLRLIYVIYPWWNGNKYKDIDRKIK 423
Query: 418 FVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTET-DLFYFDPDSIEWSDYFMNTHI 476
MR+V++Y+PY F GIFDDTNTEKLR+ + E LF FDP SI+W DY HI
Sbjct: 424 LAMRLVDLYRPYVLFKGIFDDTNTEKLRLKRKEINKEMYGLFEFDPKSIDWEDYMTTIHI 483
Query: 477 PGV 479
PG+
Sbjct: 484 PGL 486
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q39152|FACR1_ARATH Fatty acyl-CoA reductase 1 OS=Arabidopsis thaliana GN=FAR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 506 bits (1304), Expect = e-142, Method: Compositional matrix adjust.
Identities = 246/483 (50%), Positives = 336/483 (69%), Gaps = 10/483 (2%)
Query: 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLA 64
+ V+FL NKTIL++G GF+AKV +EKILR+QPNVKK+YL +RA D SA R ++EV+
Sbjct: 4 NCVQFLGNKTILITGAPGFLAKVLVEKILRLQPNVKKIYLLLRAPDEKSAMQRLRSEVME 63
Query: 65 KDVFNVLKEKWGT-RLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAI 123
D+F VL+ G LN+ + EKI VPGDIS ++LGLKD++L + +W+E+DI++N AA
Sbjct: 64 IDLFKVLRNNLGEDNLNALMREKIVPVPGDISIDNLGLKDTDLIQRMWSEIDIIINIAAT 123
Query: 124 TKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP------ 177
T FDERYD+ GINT G ++++NFAKKCVK ++ +HVSTAY++GE+ GL+LE P
Sbjct: 124 TNFDERYDIGLGINTFGALNVLNFAKKCVKGQLLLHVSTAYISGEQPGLLLEKPFKMGET 183
Query: 178 LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237
L G LD + E ++ QKL EL+ +EI+ MK+ G RAKLHGWPNTYVFTK M
Sbjct: 184 LSGDRELDINIEHDLMKQKLKELQD--CSDEEISQTMKDFGMARAKLHGWPNTYVFTKAM 241
Query: 238 GEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETK 297
GEMLM + +ENL LVIIRPT+++ T EPFPGW+E LKT++++ VA +G L+C + ++
Sbjct: 242 GEMLMGKYRENLPLVIIRPTMITSTIAEPFPGWIEGLKTLDSVIVAYGKGRLKCFLADSN 301
Query: 298 VIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPW 357
+ D+IP DMVVNAM+ A AH+ IYHVGSS +NPVT + D+ YF K+P
Sbjct: 302 SVFDLIPADMVVNAMVAAATAHSGDTGIQAIYHVGSSCKNPVTFGQLHDFTARYFAKRPL 361
Query: 358 INKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQVANTVFHNFFKGVYNDLRKKVK 417
I + G P+ V K + S++A F YM +RY LPL+ L++ N V+ Y+DL +K+K
Sbjct: 362 IGRNGSPIIVVKGTILSTMAQFSLYMTLRYKLPLQILRLINIVYPWSHGDNYSDLSRKIK 421
Query: 418 FVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETD-LFYFDPDSIEWSDYFMNTHI 476
MR+VE+Y+PY F GIFDD NTE+LRM + + E D F FDP SI+W +Y NTHI
Sbjct: 422 LAMRLVELYQPYLLFKGIFDDLNTERLRMKRKENIKELDGSFEFDPKSIDWDNYITNTHI 481
Query: 477 PGV 479
PG+
Sbjct: 482 PGL 484
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q0WRB0|FACR5_ARATH Probable fatty acyl-CoA reductase 5 OS=Arabidopsis thaliana GN=FAR5 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 491 bits (1263), Expect = e-138, Method: Compositional matrix adjust.
Identities = 243/490 (49%), Positives = 333/490 (67%), Gaps = 12/490 (2%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
MEL + V+FL NKTILV+G TGF+AKVF+EKILRVQPNVKKLYL VRA+D ++A R +
Sbjct: 1 MEL-NCVQFLRNKTILVTGATGFLAKVFVEKILRVQPNVKKLYLLVRASDNEAATKRLRT 59
Query: 61 EVLAKDVFNVLKEKWG-TRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVN 119
EV K++F VL++ G +LN+ + EK+ VPGDI+++ LG+ DS+L+E + E+DI+VN
Sbjct: 60 EVFEKELFKVLRQNLGDEKLNTLLYEKVVSVPGDIATDQLGINDSHLRERMQKEIDIVVN 119
Query: 120 SAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPL- 178
AA T FDERYDV GINT G ++++NFAKKCVK+++ +HVSTAYV GE+ GLI E P
Sbjct: 120 VAATTNFDERYDVGLGINTFGALNVLNFAKKCVKVQLLLHVSTAYVCGEKPGLIPEKPFI 179
Query: 179 ------DGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232
+ LD + E +++ Q+L EL + +++ITL MK LG ERAKLHGWPNTYV
Sbjct: 180 MEEIRNENGLQLDINLERELMKQRLKELNEQDCSEEDITLSMKELGMERAKLHGWPNTYV 239
Query: 233 FTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL 292
FTK+MGEML+ + KENL LVIIRPT+++ T EPFPGW+E L+T++++ +A +G L+C
Sbjct: 240 FTKSMGEMLLGKHKENLPLVIIRPTMITSTLSEPFPGWIEGLRTVDSVIIAYGKGVLKCF 299
Query: 293 VGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYF 352
+ + + D+IPVDMV NAMI A HA +YHVGSS +NPVT I + YF
Sbjct: 300 LVDVNSVCDMIPVDMVANAMITAAAKHAGGSGVHMVYHVGSSHQNPVTFGEIHEIAVRYF 359
Query: 353 TKKPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQVANTVFHNFFKGVYNDL 412
TK P ++ G + VSK+ ++A F YM +RY LPL+ L++ + ++ Y D
Sbjct: 360 TKNPLRSRNGSLITVSKVRFIPTMALFSLYMTLRYKLPLQLLKLVDIIYPWRNGDKYGDK 419
Query: 413 RKKVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSR---TETDLFYFDPDSIEWSD 469
+K++ VMR+VE+Y+PY F GIFDD NT+ L + TE +F FDP I W D
Sbjct: 420 NRKIELVMRLVELYEPYVLFKGIFDDRNTKSLCANQKEEEIKNTEKLMFDFDPKGINWGD 479
Query: 470 YFMNTHIPGV 479
Y N HI G+
Sbjct: 480 YLTNIHISGL 489
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q1PEI6|FACR8_ARATH Fatty acyl-CoA reductase 8 OS=Arabidopsis thaliana GN=FAR8 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 460 bits (1184), Expect = e-128, Method: Compositional matrix adjust.
Identities = 234/486 (48%), Positives = 326/486 (67%), Gaps = 11/486 (2%)
Query: 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLA 64
S V FL+NKTILV+G TGF+AKVF+EKILRVQPNV KLYL VRA+D ++A R + E
Sbjct: 4 SCVHFLQNKTILVTGATGFLAKVFVEKILRVQPNVNKLYLVVRASDNEAATKRLRTEAFE 63
Query: 65 KDVFNVLKEKWG-TRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAI 123
KD+F VL++ G +LN+ +SEK+ V GDI+ + LG+KDSNL+E + E+DI+VN AA
Sbjct: 64 KDLFKVLRDNLGDEKLNTLLSEKVVPVAGDIAMDHLGMKDSNLRERMQKEIDIVVNVAAT 123
Query: 124 TKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPL----- 178
T FDERYD+ GINT G ++++NFAKKCVK ++ +HVSTAYV GE+ GL+ E P
Sbjct: 124 TNFDERYDIGLGINTFGALNVLNFAKKCVKAQLLLHVSTAYVCGEKPGLLPEKPFVMEEI 183
Query: 179 --DGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236
+ LD + E +++ Q+L EL +G ++ T +MK LG ERAKLHGWPNTYVFTK+
Sbjct: 184 CNENGLQLDINLERELMKQRLKELNEQGCSEEGTTFYMKELGMERAKLHGWPNTYVFTKS 243
Query: 237 MGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGET 296
MGEML+ KENL LVIIRPT+++ T EPFPGW+E L+T++++ +A +G L+C + +
Sbjct: 244 MGEMLLGNHKENLPLVIIRPTMITSTLFEPFPGWIEGLRTVDSVIIAYGKGVLKCFLVDV 303
Query: 297 KVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356
+ D+IP DMV NAMI A HA +Y VGSS +NP+ I + F YFTK
Sbjct: 304 NSVCDMIPADMVANAMIAAAATHAGGSKVHMVYQVGSSHQNPIIYGEIREILFCYFTKNS 363
Query: 357 WINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQVANTVFHNFFKGVYNDLRKKV 416
++ G + VSK+ L ++A F YM IRY LP++ L++ + ++ + Y + +K+
Sbjct: 364 LRSRNGSMITVSKMKLIPTLALFSLYMTIRYKLPVQLLKLVDIIYPSREGDEYKNKNRKI 423
Query: 417 KFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTAR---GSRTETDLFYFDPDSIEWSDYFMN 473
VMR+V++Y+PY F GIFDD NT+ L + +E +F FDP I+W DY +N
Sbjct: 424 DMVMRLVKLYEPYVLFKGIFDDRNTKNLCAKQKEEDNRNSENFMFDFDPKIIKWKDYLIN 483
Query: 474 THIPGV 479
HIPG+
Sbjct: 484 VHIPGL 489
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q08891|FACR2_ARATH Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana GN=FAR2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 334 bits (856), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 192/504 (38%), Positives = 299/504 (59%), Gaps = 32/504 (6%)
Query: 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAK 65
++ FL+ K L++G TGF+AKV IEK+LR+ P+V K+YL ++A ++A R +NEVL
Sbjct: 124 IISFLQGKKFLITGSTGFLAKVLIEKVLRMAPDVSKIYLLIKAKSKEAAIERLKNEVLDA 183
Query: 66 DVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK 125
++FN LKE G SF+ K+ V G+I ++GL+ ++ EE+ E+D+++NSAA T
Sbjct: 184 ELFNTLKETHGASYMSFMLTKLIPVTGNICDSNIGLQ-ADSAEEIAKEVDVIINSAANTT 242
Query: 126 FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP-------- 177
F+ERYDVA INT G +L+ FAKKC KLK+F+ VSTAYV G+R G I+E P
Sbjct: 243 FNERYDVALDINTRGPGNLMGFAKKCKKLKLFLQVSTAYVNGQRQGRIMEKPFSMGDCIA 302
Query: 178 ----LDG-ASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232
L+G LD D EMK+ E KG ++ MK+LG ERA+ +GW +TYV
Sbjct: 303 TENFLEGNRKALDVDREMKLA----LEAARKGTQNQDEAQKMKDLGLERARSYGWQDTYV 358
Query: 233 FTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL 292
FTK MGEM++ ++ ++ +VIIRP+V+ TYK+PFPGW+E + ++ + + +G L
Sbjct: 359 FTKAMGEMMINSTRGDVPVVIIRPSVIESTYKDPFPGWMEGNRMMDPIVLCYGKGQLTGF 418
Query: 293 VGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA----NIYHVGSSLRNPVTLVSILDYG 348
+ + K ++DV+P DMVVNA + A+ H SD N+Y + SS NP+ + +
Sbjct: 419 LVDPKGVLDVVPADMVVNATLAAIAKHGMAMSDPEPEINVYQIASSAINPLVFEDLAELL 478
Query: 349 FVYFTKKPWINKQGKPVKVSKIILFSSIASFHGYM----QIRYLLPLKGLQVANTVFHNF 404
+ ++ P ++ +G P+ V + LF+S+ F ++ Q R L + G+ ++
Sbjct: 479 YNHYKTSPCMDSKGDPIMVRLMKLFNSVDDFSDHLWRDAQERSGL-MSGMSSVDSKMMQK 537
Query: 405 FKGVYNDLRKKVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDS 464
K + +K V+ + IY+PY ++ G FD++NT+ R+ S E F FD S
Sbjct: 538 LKFI---CKKSVEQAKHLATIYEPYTFYGGRFDNSNTQ--RLMENMSEDEKREFGFDVGS 592
Query: 465 IEWSDYFMNTHIPGVEKLLQQKRS 488
I W+DY N HIPG+ + + + R+
Sbjct: 593 INWTDYITNVHIPGLRRHVLKGRA 616
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Involved in the synthesis of the lipid component in sporopollenin. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q9FMQ9|FACR7_ARATH Putative fatty acyl-CoA reductase 7 OS=Arabidopsis thaliana GN=FAR7 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 310 bits (795), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 156/375 (41%), Positives = 225/375 (60%), Gaps = 27/375 (7%)
Query: 113 ELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172
L ++V ++ ++RYDVA GINT G I+++NFAKKCVK K+ +HVST YV GER G
Sbjct: 40 RLYLLVRASDKKSAEQRYDVALGINTFGAINVLNFAKKCVKPKLLLHVSTVYVCGERPGH 99
Query: 173 ILE------NPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHG 226
I+E L+G + +D + E ++ DQK + K +G ++E MK+ G +RA+L+G
Sbjct: 100 IVEKHFAMGESLNGKNKVDINTERRLADQKSKQFKEQGCSEEETEQAMKDFGLKRARLYG 159
Query: 227 WPNTYVFTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQ 286
WPNTYVFTK MGEML+ +E + +VIIRPT+++ T+ +PFPGW+E LKT++++ + +
Sbjct: 160 WPNTYVFTKAMGEMLLGHYRETMPIVIIRPTIITSTFSDPFPGWIEGLKTVDSVIIFYGK 219
Query: 287 GNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILD 346
G L+C + + K + D+IPVDMVVNAMI H +YHVGSS +NPV I +
Sbjct: 220 GILKCFLVDQKTVCDIIPVDMVVNAMIAIAADHCHDSGSHTVYHVGSSNQNPVIYKQIYE 279
Query: 347 YGFVYFTKKPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQVANTV------ 400
YF K P + + G + V K+ S++A F Y +RY LP++ L + + +
Sbjct: 280 MMSRYFMKSPLVGRNGMLI-VPKVTRISTLARFRVYTNLRYKLPIQILGLLSVISLSQRD 338
Query: 401 ---FHNFFKGVYNDLRKKVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDL 457
HN +K K MR+V++YKPY F GIFDD N E LR+ E L
Sbjct: 339 KFALHN----------RKFKMAMRLVKLYKPYVLFKGIFDDKNMETLRIKNEAKDME-KL 387
Query: 458 FYFDPDSIEWSDYFM 472
F +P I+W DYFM
Sbjct: 388 FGTNPKCIDWEDYFM 402
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|B9TSP7|FACR6_ARATH Fatty acyl-CoA reductase 6, chloroplastic OS=Arabidopsis thaliana GN=FAR6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 293 bits (749), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 164/487 (33%), Positives = 273/487 (56%), Gaps = 23/487 (4%)
Query: 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAK 65
+V FLE K+ LV+G TGF+AKV IEK+LR + K++L +R+ D +SA R +E+++
Sbjct: 77 IVRFLEGKSYLVTGATGFLAKVLIEKLLRESLEIGKIFLLMRSKDQESANKRLYDEIISS 136
Query: 66 DVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK 125
D+F +LK+ G+ +F+ K+ V GDI ++LG+K S + + E+D++++ T
Sbjct: 137 DLFKLLKQMHGSSYEAFMKRKLIPVIGDIEEDNLGIK-SEIANMISEEIDVIISCGGRTT 195
Query: 126 FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPL----DGA 181
FD+RYD A +N LG L++F K C KLK+F+H STAYV G+R G +LE PL +
Sbjct: 196 FDDRYDSALSVNALGPGRLLSFGKGCRKLKLFLHFSTAYVTGKREGTVLETPLCIGENIT 255
Query: 182 SGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241
S L+ +E+K+ + + + + + +K +K LG ERA+ +GW N+Y FTK +GE +
Sbjct: 256 SDLNIKSELKLASEAVRKFRGREEIKK-----LKELGFERAQHYGWENSYTFTKAIGEAV 310
Query: 242 MQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMD 301
+ + NL +VIIRP+++ +Y EPFPGW++ + + + +A A+G + + + +MD
Sbjct: 311 IHSKRGNLPVVIIRPSIIESSYNEPFPGWIQGTRMADPIILAYAKGQISDFWADPQSLMD 370
Query: 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLR-NPVTLVSILDYGFVYFTKKPWINK 360
+IPVDMV NA I AM H + +Y++ SS NP+ ++D + P
Sbjct: 371 IIPVDMVANAAIAAMAKHGCGVPEFKVYNLTSSSHVNPMRAGKLIDLSHQHLCDFPL--- 427
Query: 361 QGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQVANTVFHNFFKGVYNDLRKKVKFVM 420
+ + + + + SS+ F + + V N G+ ++K+ + +
Sbjct: 428 EETVIDLEHMKIHSSLEGFTSALS-------NTIIKQERVIDNEGGGLSTKGKRKLNYFV 480
Query: 421 RVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYFMNTHIPGVE 480
+ + Y+PY +F FD+TNT L S E F FD I+W Y +N H+PG++
Sbjct: 481 SLAKTYEPYTFFQARFDNTNTTSL--IQEMSMEEKKTFGFDIKGIDWEHYIVNVHLPGLK 538
Query: 481 KLLQQKR 487
K K+
Sbjct: 539 KEFLSKK 545
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. May be involved in the generation of C30 primary alcohol. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|A1ZAI5|FACR1_DROME Putative fatty acyl-CoA reductase CG5065 OS=Drosophila melanogaster GN=CG5065 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 140/511 (27%), Positives = 231/511 (45%), Gaps = 80/511 (15%)
Query: 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAK 65
+ +F +++ ++G TGF+ KV +EK+LR P ++ +YL +R + R E+L
Sbjct: 119 IAQFYAGRSVFITGGTGFMGKVLVEKLLRSCPEIRNIYLLIRPKRGQEVSARL-TELLNA 177
Query: 66 DVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGL--KDSNLKEELWNELDIMVNSAAI 123
+F L+++ L+ K+ + GDI+SE+LG+ KD NL L + ++ +SAA
Sbjct: 178 PLFESLRQEKPKELS-----KVIPISGDITSEELGISEKDQNL---LCRNVSVVFHSAAT 229
Query: 124 TKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLI------LENP 177
KFDE+ ++ IN LG LV + + L +HVSTAY +RT + NP
Sbjct: 230 VKFDEKLKLSVTINMLGTKRLVELCHRMLSLDALIHVSTAYCNCDRTDVSEVIYAPPYNP 289
Query: 178 LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237
D S +++ E ++DQ L K PNTY FTK +
Sbjct: 290 DDIISLINWLPE-DILDQLTPRLIGKR-----------------------PNTYTFTKAL 325
Query: 238 GEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETK 297
E ++ + NL + I+RP++V+ + EPF GWV++ L A A+G R ++ E
Sbjct: 326 AEHMLLKEAGNLPVAIVRPSIVTASLNEPFAGWVDNFNGPTGLVSALAKGMFRTMMCEKN 385
Query: 298 VIMDVIPVDMVVNAMIVAMVAHA-KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356
+ D++PVD+V+N MI A A ++ ++ IY+ + RNP+ + + K P
Sbjct: 386 YVADMVPVDIVINLMIAAAWRTATRKSNNLLIYNCCTGQRNPIIWSEFVKHAMTSVRKHP 445
Query: 357 WINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQVANTVFHNF-----FKGVYND 411
P +R P+ L N + +F GV
Sbjct: 446 LEGCLWYPTG-----------------DLRMNRPMNTL---NCIAKHFLPAYILDGVARI 485
Query: 412 LRKKVKFVMRV-------VEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDS 464
+ KK FV+ V VE + + F D N L T S + ++F FD
Sbjct: 486 MGKK-PFVVNVQNKIAKAVECLEYFATRQWRFKDDNVHALLHTL--SPKDREIFVFDVRH 542
Query: 465 IEWSDYFMNTHIPGVEKLL--QQKRSFPKTK 493
I W D ++ ++ G + L Q+ S P ++
Sbjct: 543 INW-DKYVERYVLGFREFLFKQRPESLPASR 572
|
Catalyzes the reduction of saturated fatty acyl-CoA to fatty alcohols. Drosophila melanogaster (taxid: 7227) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 570 | ||||||
| 356550111 | 490 | PREDICTED: fatty acyl-CoA reductase 3-li | 0.842 | 0.979 | 0.611 | 0.0 | |
| 356543580 | 490 | PREDICTED: fatty acyl-CoA reductase 3-li | 0.842 | 0.979 | 0.601 | 1e-180 | |
| 356542728 | 493 | PREDICTED: fatty acyl-CoA reductase 3-li | 0.843 | 0.975 | 0.605 | 1e-177 | |
| 225436689 | 490 | PREDICTED: fatty acyl-CoA reductase 3 [V | 0.842 | 0.979 | 0.599 | 1e-176 | |
| 388491432 | 492 | unknown [Medicago truncatula] | 0.840 | 0.973 | 0.596 | 1e-176 | |
| 357453013 | 492 | Fatty acyl-CoA reductase [Medicago trunc | 0.840 | 0.973 | 0.594 | 1e-175 | |
| 356541412 | 523 | PREDICTED: fatty acyl-CoA reductase 3-li | 0.843 | 0.919 | 0.597 | 1e-175 | |
| 225436687 | 490 | PREDICTED: fatty acyl-CoA reductase 3 is | 0.842 | 0.979 | 0.599 | 1e-174 | |
| 356550115 | 490 | PREDICTED: fatty acyl-CoA reductase 3-li | 0.842 | 0.979 | 0.591 | 1e-174 | |
| 356543578 | 490 | PREDICTED: fatty acyl-CoA reductase 3-li | 0.842 | 0.979 | 0.589 | 1e-173 |
| >gi|356550111|ref|XP_003543433.1| PREDICTED: fatty acyl-CoA reductase 3-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 298/487 (61%), Positives = 379/487 (77%), Gaps = 7/487 (1%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
ME+GSV+ FLE+KTIL+ G TGF+AK+F+EKILRVQPNVKKL+L +RA+D SA R QN
Sbjct: 1 MEVGSVLNFLEDKTILIVGATGFLAKIFLEKILRVQPNVKKLFLLLRASDAKSANYRLQN 60
Query: 61 EVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120
E++AKD+F VLKEK G SFISEK+T VPGDIS EDLGLKDS L+EE+ N+ D++VN
Sbjct: 61 EIIAKDLFIVLKEKLGANFKSFISEKVTLVPGDISYEDLGLKDSILREEICNQTDVIVNL 120
Query: 121 AAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP--- 177
AA T FDERYD+A G+N GV H++NFAK+C KLKV +HVSTAYV GER GLILE P
Sbjct: 121 AATTNFDERYDIALGLNIFGVKHVMNFAKQCTKLKVVLHVSTAYVCGERGGLILEEPYNF 180
Query: 178 ---LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234
L+G SGLD DAE ++ KL+EL+ +GA ++EI + MKNLG RAK++GWPNTYVFT
Sbjct: 181 GDSLNGVSGLDIDAERTIVCDKLDELREQGATEREIKIAMKNLGISRAKVYGWPNTYVFT 240
Query: 235 KTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG 294
K +GEML++Q K LS+VI+RPT+V+ T +EPFPGWVE ++TI++L V +G L C +G
Sbjct: 241 KAVGEMLVEQLKGRLSVVIMRPTIVTSTLREPFPGWVEGVRTIDSLAVTYGKGKLTCFLG 300
Query: 295 ETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354
++D +P DMVVNAM+VAMVAHA QPSD IYHVGSSLRNP+T +++ DYG YFT
Sbjct: 301 NINGVVDAVPADMVVNAMLVAMVAHANQPSDI-IYHVGSSLRNPLTYLNLQDYGLKYFTA 359
Query: 355 KPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQVANTVFHNFFKGVYNDLRK 414
KPWINK G PVKV ++ + + + SF YM IRYLLPLKGL++ANT +F+G Y +L +
Sbjct: 360 KPWINKDGTPVKVGRVTVLTDMDSFQRYMFIRYLLPLKGLELANTALCQYFRGTYLELHR 419
Query: 415 KVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYFMNT 474
K++ VMR+VE+Y+PY +FNG+FDD NTEKLR+ A+ S TETDLFYFD + W DYFM T
Sbjct: 420 KIQVVMRMVELYRPYMFFNGVFDDINTEKLRIAAKQSGTETDLFYFDTKEVNWEDYFMKT 479
Query: 475 HIPGVEK 481
H+PG+ K
Sbjct: 480 HLPGIVK 486
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356543580|ref|XP_003540238.1| PREDICTED: fatty acyl-CoA reductase 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 636 bits (1641), Expect = e-180, Method: Compositional matrix adjust.
Identities = 293/487 (60%), Positives = 382/487 (78%), Gaps = 7/487 (1%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
ME+GSV+ FL+++TIL+ G TGF+AK+F+EKILRVQPNVKKL+L +RA+D SA R QN
Sbjct: 1 MEVGSVLNFLQDRTILIVGATGFLAKIFLEKILRVQPNVKKLFLLLRASDAKSANYRLQN 60
Query: 61 EVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120
E++AKD+F VLKEK G SFISEK+T VPGDIS EDLGL DS L+EE+ N+ D++VN
Sbjct: 61 EIIAKDLFIVLKEKLGANFKSFISEKVTLVPGDISYEDLGLTDSILREEICNQTDVIVNL 120
Query: 121 AAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP--- 177
AA TKFDERYD+A G+N GV H++ FAK+C KLK+ +HVSTAYV GER GLILE+P
Sbjct: 121 AATTKFDERYDLALGLNIFGVKHVMKFAKQCAKLKILLHVSTAYVCGERGGLILEDPYHF 180
Query: 178 ---LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234
L+G SGLD +AE ++ KL+EL+ +GA ++EI + MKNLG RAK++GWPNTYVFT
Sbjct: 181 GDSLNGVSGLDIEAERTIVCDKLDELREQGATEREIEIAMKNLGISRAKVYGWPNTYVFT 240
Query: 235 KTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG 294
K +GEML++Q K +LS+VI+RPT+V+ T +EPFPGW E ++TI++L V +G L+C +G
Sbjct: 241 KAVGEMLVEQLKGSLSVVIMRPTIVTSTLREPFPGWAEGVRTIDSLAVTYGKGKLKCFLG 300
Query: 295 ETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354
++DV+P DMVVNAM+VAMVAHAKQPSD +YHVGSSLRNP+T +++ DYG YFT
Sbjct: 301 NINGVVDVVPADMVVNAMLVAMVAHAKQPSDI-VYHVGSSLRNPLTYLNLQDYGLKYFTA 359
Query: 355 KPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQVANTVFHNFFKGVYNDLRK 414
KPWINK G PVKV ++ + + + SF YM IRYLLPLKGL++ANT +F+G Y +L +
Sbjct: 360 KPWINKDGTPVKVGRVTVLTDMDSFQRYMFIRYLLPLKGLELANTALCQYFRGTYLELHR 419
Query: 415 KVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYFMNT 474
K++ VMR+VE+Y+PY +F+G+FDD NTEKLRM A+ S TETDLFYFD + W DYFM T
Sbjct: 420 KIQVVMRMVELYRPYMFFDGVFDDMNTEKLRMAAKQSGTETDLFYFDTKEVNWDDYFMKT 479
Query: 475 HIPGVEK 481
H+PG+ K
Sbjct: 480 HLPGIVK 486
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356542728|ref|XP_003539817.1| PREDICTED: fatty acyl-CoA reductase 3-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 627 bits (1617), Expect = e-177, Method: Compositional matrix adjust.
Identities = 296/489 (60%), Positives = 377/489 (77%), Gaps = 8/489 (1%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
MELGS++ FL++K IL++G TGF+AKV +EKILRVQPNVKKLYL +RAAD SA R N
Sbjct: 1 MELGSILHFLQDKNILITGATGFLAKVLLEKILRVQPNVKKLYLLLRAADAKSATHRLNN 60
Query: 61 EVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120
E++ KD+F VLKEK G NSF+S+K+T VPGDIS EDLGL+DS L+EE++++ D+++N
Sbjct: 61 EIIGKDLFRVLKEKLGANFNSFVSKKLTLVPGDISREDLGLEDSILREEIYDQTDVIINL 120
Query: 121 AAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE--RTGLILENP- 177
AA T FDERYD++ G+NT GV +++NFAKKC KL+V VHVSTAYV GE R GLILE P
Sbjct: 121 AATTNFDERYDISLGLNTFGVKYVINFAKKCTKLEVLVHVSTAYVCGEGGREGLILEKPY 180
Query: 178 -----LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232
L+G SGLD +AE KV+ KL+EL+ GA +KEI MK+LG RAKL+GWPNTYV
Sbjct: 181 HLGDSLNGVSGLDINAEEKVVRDKLSELQQLGATEKEIKEVMKDLGISRAKLYGWPNTYV 240
Query: 233 FTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL 292
FTK MGEML++Q K NLS+V IRPT+V+ T+KEPFPGW E ++TI++L VA +G L C
Sbjct: 241 FTKAMGEMLVEQLKGNLSVVTIRPTIVTSTFKEPFPGWAEGVRTIDSLAVAYGKGKLTCF 300
Query: 293 VGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYF 352
+G+ K I+D IP DMVVNA++VAMVAHA PSD IYHVGSS+R P+ ++ +YGF YF
Sbjct: 301 LGDLKAIVDAIPADMVVNAILVAMVAHANHPSDDVIYHVGSSVRRPLRYGNLQEYGFRYF 360
Query: 353 TKKPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQVANTVFHNFFKGVYNDL 412
T KP INK G+PVKV K+ + S++ SF YM IRYLL LKGL++ANT F +F+G Y +L
Sbjct: 361 TAKPCINKDGRPVKVGKVTVLSNMDSFRRYMFIRYLLVLKGLELANTAFCQYFQGTYLNL 420
Query: 413 RKKVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYFM 472
+K++ VMR+V++YKPY +F FDD NTEKLRM AR ETDLFYFDP+ I+W DYF+
Sbjct: 421 NRKIQIVMRLVDLYKPYLFFKAAFDDMNTEKLRMAARQGGVETDLFYFDPELIDWEDYFL 480
Query: 473 NTHIPGVEK 481
N H+PGV K
Sbjct: 481 NIHLPGVVK 489
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225436689|ref|XP_002263184.1| PREDICTED: fatty acyl-CoA reductase 3 [Vitis vinifera] gi|296084945|emb|CBI28354.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 292/487 (59%), Positives = 375/487 (77%), Gaps = 7/487 (1%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
MELGS+VEFLENK+ILV+G TGF+AK+F+EKILR+QPNVKKL+L +RAAD SA R N
Sbjct: 1 MELGSIVEFLENKSILVTGATGFLAKIFVEKILRIQPNVKKLFLLLRAADTKSATQRLHN 60
Query: 61 EVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120
EVL K++F VLK+KWG+ LNSFISEK+T +PGDIS E+LG+ + NL+EE+W E+D+++N
Sbjct: 61 EVLGKELFRVLKDKWGSNLNSFISEKVTPIPGDISCENLGVTNLNLREEIWREVDVILNL 120
Query: 121 AAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP--- 177
AA TKFDERYDVA GINTLG H++NF+KKCVKLK+ +HVSTAYV+GER GLILE+P
Sbjct: 121 AATTKFDERYDVALGINTLGASHVLNFSKKCVKLKMLLHVSTAYVSGEREGLILESPLKM 180
Query: 178 ---LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234
L+GASGLD D E K++++ LNEL A ++ I+L MK LG +RA ++GWPNTYVFT
Sbjct: 181 GKALNGASGLDVDKEKKLVEEGLNELNELQATEETISLTMKELGMKRALMYGWPNTYVFT 240
Query: 235 KTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG 294
K MGEML+ Q KENL LVI+RPT+++ TY EPF GW+E ++TI+ + +G L CL+
Sbjct: 241 KAMGEMLLGQFKENLPLVILRPTIITSTYMEPFSGWIEGIRTIDNVLAGYCKGKLTCLLA 300
Query: 295 ETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354
+ + I+D IP DMVVN MIVAMVAHA QP + IY VGSSL+NP+ L+ + D+ F YF +
Sbjct: 301 DPECILDAIPGDMVVNCMIVAMVAHANQPCEI-IYQVGSSLKNPLKLLDLHDFFFKYFHE 359
Query: 355 KPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQVANTVFHNFFKGVYNDLRK 414
PWINK GK VKVSK+ILFS+ FHGY+ +RY+LPLK LQ N + G+ D +
Sbjct: 360 NPWINKDGKAVKVSKLILFSTTFVFHGYLAVRYMLPLKVLQFLNFLLCQILCGMCTDHNR 419
Query: 415 KVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYFMNT 474
K+K +M +VE+YKPY +F GIFDD NT+KLR+ A S ++ DLFYFDP I+W DYF+N
Sbjct: 420 KIKMLMYLVELYKPYLFFKGIFDDLNTDKLRLAATESSSKADLFYFDPKCIDWEDYFINI 479
Query: 475 HIPGVEK 481
HIPGV K
Sbjct: 480 HIPGVLK 486
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388491432|gb|AFK33782.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 290/486 (59%), Positives = 379/486 (77%), Gaps = 7/486 (1%)
Query: 2 ELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNE 61
E+GS++ FLE KTILV G TGF+AK+F+EK+LRVQPNVKKL+L +RA+D SAA R QNE
Sbjct: 4 EVGSILNFLEGKTILVIGATGFLAKIFLEKVLRVQPNVKKLFLLLRASDDKSAASRLQNE 63
Query: 62 VLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSA 121
+LAKD+FN+L EK GT SFISEK+T VPGDI+ EDLGLKDS L+E++ ++ D+++N A
Sbjct: 64 ILAKDLFNLLNEKMGTNFKSFISEKLTVVPGDITFEDLGLKDSILREDISSQTDVIINLA 123
Query: 122 AITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP---- 177
A T FDERYD+A +NT GV H+++FAK+C++LKV VHVSTAYV GE++GLILE+P
Sbjct: 124 ATTNFDERYDIALDLNTFGVKHIMSFAKQCIRLKVLVHVSTAYVCGEKSGLILESPYLLG 183
Query: 178 --LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235
L+G +GLD +AE K++ +KL EL+ KGA + EI + MK+LG RA ++GWPNTYVFTK
Sbjct: 184 DSLNGVAGLDINAEKKLVTEKLGELQEKGATEHEIKVAMKDLGITRANVYGWPNTYVFTK 243
Query: 236 TMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGE 295
+GEML+++ K NLS+VI+RP +V+GT +EPFPGWVE L+TI+ L V +G L C +G+
Sbjct: 244 ALGEMLVEKLKGNLSVVILRPAIVTGTLREPFPGWVEGLRTIDCLAVVYGKGKLTCFLGD 303
Query: 296 TKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355
++D IP DMVVNAM+VAMVAHA QP D +YHVGSS+RNP+ S DYG YF K
Sbjct: 304 INGVVDAIPADMVVNAMLVAMVAHANQPRDG-VYHVGSSVRNPLRYQSFHDYGLKYFKAK 362
Query: 356 PWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQVANTVFHNFFKGVYNDLRKK 415
PWINK G VKV K+ + +++ASF Y+ IRYLLPLKGL++ NT +F+G Y +L +K
Sbjct: 363 PWINKDGTVVKVGKMTILTNMASFQRYIFIRYLLPLKGLKLVNTALCQYFQGTYLELNRK 422
Query: 416 VKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYFMNTH 475
++ VMR+VE+Y+PY +F GIFDD NTEKLRM+AR S TE DLFYFDP ++W DYFMNTH
Sbjct: 423 IQVVMRLVELYRPYLFFKGIFDDLNTEKLRMSARQSGTEIDLFYFDPKEMDWEDYFMNTH 482
Query: 476 IPGVEK 481
+PG+ K
Sbjct: 483 LPGLVK 488
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357453013|ref|XP_003596783.1| Fatty acyl-CoA reductase [Medicago truncatula] gi|355485831|gb|AES67034.1| Fatty acyl-CoA reductase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 289/486 (59%), Positives = 379/486 (77%), Gaps = 7/486 (1%)
Query: 2 ELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNE 61
E+GS++ FLE KTILV G TGF+AK+F+EK+LRVQPNVKKL+L +RA+D SAA R QNE
Sbjct: 4 EVGSILNFLEGKTILVIGATGFLAKIFLEKVLRVQPNVKKLFLLLRASDDKSAASRLQNE 63
Query: 62 VLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSA 121
+LAKD+FN+L EK GT SFISEK+T VPGDI+ EDLGLKDS L+E++ ++ D+++N A
Sbjct: 64 ILAKDLFNLLNEKMGTNFKSFISEKLTVVPGDITFEDLGLKDSILREDISSQTDVIINLA 123
Query: 122 AITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP---- 177
A T FDERYD+A +NT GV H+++FAK+C++LKV VHVSTAYV GE++GLILE+P
Sbjct: 124 ATTNFDERYDIALDLNTFGVKHIMSFAKQCIRLKVLVHVSTAYVCGEKSGLILESPYLLG 183
Query: 178 --LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235
L+G +GLD +AE K++ +KL EL+ KGA + EI + MK+LG RA ++GWPNTYVFTK
Sbjct: 184 DSLNGVAGLDINAEKKLVTEKLGELQEKGATEHEIKVAMKDLGITRANVYGWPNTYVFTK 243
Query: 236 TMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGE 295
+GEML+++ K NLS+VI+RP +V+ T +EPFPGWVE L+TI++L V +G L C +G+
Sbjct: 244 ALGEMLVEKLKGNLSVVILRPAIVTSTLREPFPGWVEGLRTIDSLAVVYGKGKLTCFLGD 303
Query: 296 TKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355
++D IP DMVVNAM+VAMVAHA QP D +YHVGSS+RNP+ S DYG YF K
Sbjct: 304 INGVVDAIPADMVVNAMLVAMVAHANQPRDG-VYHVGSSVRNPLRYQSFHDYGLKYFKAK 362
Query: 356 PWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQVANTVFHNFFKGVYNDLRKK 415
PWINK G VKV K+ + +++ASF Y+ IRYLLPLKGL++ NT +F+G Y +L +K
Sbjct: 363 PWINKDGTVVKVGKMTILTNMASFQRYIFIRYLLPLKGLKLVNTALCQYFQGTYLELNRK 422
Query: 416 VKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYFMNTH 475
++ VMR+VE+Y+PY +F GIFDD NTEKLRM+AR S TE DLFYFDP ++W DYFMNTH
Sbjct: 423 IQVVMRLVELYRPYLFFKGIFDDLNTEKLRMSARQSGTEIDLFYFDPKEMDWEDYFMNTH 482
Query: 476 IPGVEK 481
+PG+ K
Sbjct: 483 LPGLVK 488
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356541412|ref|XP_003539171.1| PREDICTED: fatty acyl-CoA reductase 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 621 bits (1602), Expect = e-175, Method: Compositional matrix adjust.
Identities = 292/489 (59%), Positives = 375/489 (76%), Gaps = 8/489 (1%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
MELGS++ FL++K+IL++G TGF+AKV +EKILRVQPNVKKLYL +R D SA R N
Sbjct: 31 MELGSILHFLQDKSILITGATGFLAKVLLEKILRVQPNVKKLYLLLRTEDAKSATHRLHN 90
Query: 61 EVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120
E++ KD+F VLKEK G NSF+S+K+T VPGDIS EDLGL+DS L+EE++++ D+++N
Sbjct: 91 EIIGKDLFRVLKEKLGANFNSFVSKKLTLVPGDISREDLGLEDSILREEIYDQTDVIINL 150
Query: 121 AAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE--RTGLILENP- 177
AA T FDERYD++ G+NT GV +++NFAKKC KLKV VHVSTAYV GE R GLILE P
Sbjct: 151 AATTNFDERYDISLGLNTFGVKYVINFAKKCTKLKVLVHVSTAYVCGEGGREGLILEKPY 210
Query: 178 -----LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232
L+G SGLD +AE KV+ KL+EL+ GA +KEI MK+LG RAKL+GWPNTYV
Sbjct: 211 HLGDSLNGVSGLDINAEEKVVRDKLSELQQLGATEKEIKEVMKDLGISRAKLYGWPNTYV 270
Query: 233 FTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL 292
FTK MGEML++Q K NLS+VIIRP++V+ T KEPFPGW E ++TI++L VA +G L C
Sbjct: 271 FTKAMGEMLVEQLKGNLSVVIIRPSIVTSTLKEPFPGWAEGVRTIDSLAVAYGKGKLTCF 330
Query: 293 VGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYF 352
+G+ K I+D IP DMVVNA++VAMVAHA +PSD IYH+GSS+R P+ + +YGF YF
Sbjct: 331 LGDLKAIVDAIPADMVVNAILVAMVAHANRPSDDVIYHIGSSVRRPLRYGKLQEYGFRYF 390
Query: 353 TKKPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQVANTVFHNFFKGVYNDL 412
T KP I+K G+PVKV K+ + S++ SF YM IRYLL LKGL++ANT F +F+G Y DL
Sbjct: 391 TAKPCISKDGRPVKVGKVTVLSNMDSFRRYMFIRYLLVLKGLELANTAFCQYFQGTYLDL 450
Query: 413 RKKVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYFM 472
+K++ VMR+V++YKPY +F FDD NTEKLRM R ETDLFYFDP+ I+W DYF+
Sbjct: 451 NRKIQIVMRLVDLYKPYLFFKAAFDDMNTEKLRMAGRQGGVETDLFYFDPELIDWEDYFL 510
Query: 473 NTHIPGVEK 481
N H+PG+ K
Sbjct: 511 NIHLPGMVK 519
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225436687|ref|XP_002263127.1| PREDICTED: fatty acyl-CoA reductase 3 isoform 1 [Vitis vinifera] gi|296084944|emb|CBI28353.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 292/487 (59%), Positives = 377/487 (77%), Gaps = 7/487 (1%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
MELGS+VEFLENK+ILV+G TGF+AK+F+E+ILR QPNVKKL+L +RA D SA R N
Sbjct: 1 MELGSIVEFLENKSILVTGATGFLAKIFVERILRTQPNVKKLFLLLRAGDTKSATQRLHN 60
Query: 61 EVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120
EV+ K++F VL+EKW + NSF+S+K+T VPGDIS +DLG+ DSNL+EE+W E+DI+VN
Sbjct: 61 EVIGKELFWVLREKWASDFNSFVSKKLTPVPGDISCDDLGVTDSNLREEMWREVDIVVNL 120
Query: 121 AAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP--- 177
AA T FDERYDVA GIN LG H+++FAKKCVK+K+ +HVSTAYVAGE++GLILE P
Sbjct: 121 AATTNFDERYDVALGINALGARHVLDFAKKCVKIKMLLHVSTAYVAGEQSGLILEQPFQM 180
Query: 178 ---LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234
L+G GLD + E K+++++L+EL+++GA ++ +TL MK+ G +RAK+HGWPNTYVFT
Sbjct: 181 GETLNGTFGLDIEEEKKLMEERLDELQSEGATREAVTLAMKDFGIQRAKMHGWPNTYVFT 240
Query: 235 KTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG 294
K MGEML+ KENL L I+RPT+VS TYKEPFPGWVE ++TI++ V +G L +G
Sbjct: 241 KAMGEMLLGHLKENLPLAILRPTIVSSTYKEPFPGWVEGIRTIDSFAVGYGKGRLTFFLG 300
Query: 295 ETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354
+ + I+DVIP DMVVN+MIVAM AHA QP + IY VGSS++NPV ++ D+G YFTK
Sbjct: 301 DIEAIVDVIPADMVVNSMIVAMAAHANQPCEV-IYQVGSSVKNPVRYSNLQDFGLRYFTK 359
Query: 355 KPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQVANTVFHNFFKGVYNDLRK 414
PWINK GK VKV K+ + S++ SFH YM +RYLL LKGLQ NT F +F+G Y DL +
Sbjct: 360 NPWINKDGKAVKVGKVTVLSTMDSFHRYMALRYLLLLKGLQFVNTAFCQYFRGTYTDLNR 419
Query: 415 KVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYFMNT 474
++KF++R++E+YKPY +F G+FDD NTEKLRM S E DLFYFDP I+W DYFMN
Sbjct: 420 RIKFLLRLIELYKPYLFFKGVFDDMNTEKLRMAVTASGAEADLFYFDPKCIDWEDYFMNI 479
Query: 475 HIPGVEK 481
HIPG K
Sbjct: 480 HIPGAVK 486
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356550115|ref|XP_003543435.1| PREDICTED: fatty acyl-CoA reductase 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust.
Identities = 288/487 (59%), Positives = 375/487 (77%), Gaps = 7/487 (1%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
MELGS++ FL++KTILV+G TGF+AK+F+EKILRVQPNVKKLYL +RA D +SA R
Sbjct: 1 MELGSIIHFLQDKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRARDTESATQRLHA 60
Query: 61 EVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120
E++ KD+F +LKEK GTR NS++SEK+T VPGDIS EDL LKD L EE++N+ D++VN
Sbjct: 61 EIIGKDLFRLLKEKLGTRFNSYVSEKLTVVPGDISQEDLNLKDPILGEEIFNQTDVIVNL 120
Query: 121 AAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP--- 177
AA T FDERYDVA GINTLGV+H+++FAKKCVKLKV +HVSTAYV GE+ GLILE+P
Sbjct: 121 AATTNFDERYDVALGINTLGVMHVLSFAKKCVKLKVLIHVSTAYVCGEKEGLILEDPHHF 180
Query: 178 ---LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234
L+G GLD D E K ++QKL +L+ +GA + +I L MK+LG+ERAK++GW NTYVFT
Sbjct: 181 GVSLNGVPGLDIDMEKKNVEQKLIQLREEGATEHDIELAMKDLGSERAKMYGWANTYVFT 240
Query: 235 KTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG 294
K MGEML+ +K N+++VI+RPT+V+ T+ EPFPGW+E L+TI+++ VA +G L C +
Sbjct: 241 KAMGEMLVGTTKGNMNVVIVRPTMVTSTHTEPFPGWIEGLRTIDSIVVAYGKGKLACFLA 300
Query: 295 ETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354
K + DVIP DMVVN M+VAMVAHA QPSD IYH+GSS+ NPV +++ DY YF +
Sbjct: 301 NLKAVFDVIPADMVVNTMLVAMVAHANQPSDI-IYHLGSSVVNPVKYLNLRDYSVRYFME 359
Query: 355 KPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQVANTVFHNFFKGVYNDLRK 414
PWINK GKPVKV K+ + S++ SF YM IRYLLPLKGL++ N V +F+ +Y D +
Sbjct: 360 NPWINKDGKPVKVGKVTILSNMDSFRKYMYIRYLLPLKGLELVNAVSCQYFQKMYLDFNR 419
Query: 415 KVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYFMNT 474
K++ VMR+VE+YKPY +FNG+FD+ NTEKL +AR ET+ FYFDP I+W DYF+N
Sbjct: 420 KIRTVMRLVELYKPYLFFNGVFDNMNTEKLLSSARQGGVETEFFYFDPKMIDWEDYFINI 479
Query: 475 HIPGVEK 481
H PG+ K
Sbjct: 480 HFPGIIK 486
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356543578|ref|XP_003540237.1| PREDICTED: fatty acyl-CoA reductase 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 287/487 (58%), Positives = 373/487 (76%), Gaps = 7/487 (1%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
MELGS++ FL++KTILV+G TGF+AK+F+EKILRVQPNVKKLYL +RA D +SA R
Sbjct: 1 MELGSIMHFLQDKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRARDTESATQRLHT 60
Query: 61 EVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120
E++ KD+F +LKEK GTR NSF+SEK+ VPGDIS EDL L+D L EE++N+ D++VN
Sbjct: 61 EIIGKDLFRLLKEKLGTRFNSFVSEKLAVVPGDISQEDLNLEDPILGEEIFNQTDVIVNL 120
Query: 121 AAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP--- 177
AA T FDERYD+A INTLGV+H+++FAKKCVKLKV +HVSTAYV GER GLILE P
Sbjct: 121 AATTNFDERYDIALSINTLGVLHVLSFAKKCVKLKVLIHVSTAYVCGEREGLILEAPHHF 180
Query: 178 ---LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234
L+G G D D E K ++ KLN+L+ +GA + +I L MK+LGT+RA ++GWPNTYVFT
Sbjct: 181 GVSLNGVPGPDIDMEKKKVEDKLNQLREEGAIEHDIELAMKDLGTQRATMYGWPNTYVFT 240
Query: 235 KTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG 294
K MGEML+ +K N+++VI+RPT+V+ TYKEPFPGW+E L+TI+++ VA +G L C +
Sbjct: 241 KAMGEMLVGTTKGNMNVVIVRPTMVTSTYKEPFPGWIEGLRTIDSIVVAYGKGKLVCFLA 300
Query: 295 ETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354
+ + DVIP DMVVNAM+VAMVAHA QPSD IYHVGSS+ NPV +++ DY YFT+
Sbjct: 301 NLEAVFDVIPADMVVNAMLVAMVAHANQPSDI-IYHVGSSVVNPVMYLNLRDYSVRYFTE 359
Query: 355 KPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQVANTVFHNFFKGVYNDLRK 414
KPWIN+ GKPVKV K + ++ SF YM IRYLLPLKGL++ N +F+ +Y D +
Sbjct: 360 KPWINRDGKPVKVGKFTILRNMDSFRKYMYIRYLLPLKGLELVNAASCQYFQKMYLDFNR 419
Query: 415 KVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYFMNT 474
K++ V+R+VE+YKPY +FNG+FD+TNTEKL +AR ET+LFYFD I+W DYF+N
Sbjct: 420 KIRTVLRLVELYKPYLFFNGVFDNTNTEKLLSSARQGGVETELFYFDTKMIDWEDYFINI 479
Query: 475 HIPGVEK 481
H PG+ K
Sbjct: 480 HFPGIIK 486
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 570 | ||||||
| TAIR|locus:2134278 | 493 | CER4 "ECERIFERUM 4" [Arabidops | 0.842 | 0.973 | 0.501 | 2.4e-131 | |
| TAIR|locus:2076028 | 493 | FAR4 "fatty acid reductase 4" | 0.829 | 0.959 | 0.482 | 4e-122 | |
| TAIR|locus:2171107 | 491 | FAR1 "fatty acid reductase 1" | 0.845 | 0.981 | 0.481 | 4.1e-120 | |
| TAIR|locus:2076023 | 496 | FAR5 "fatty acid reductase 5" | 0.838 | 0.963 | 0.473 | 6.2e-117 | |
| TAIR|locus:2076038 | 496 | FAR8 "fatty acid reductase 8" | 0.838 | 0.963 | 0.461 | 1.7e-114 | |
| TAIR|locus:2176407 | 409 | FAR7 "fatty acid reductase 7" | 0.624 | 0.870 | 0.389 | 1.9e-85 | |
| TAIR|locus:2088664 | 616 | MS2 "MALE STERILITY 2" [Arabid | 0.836 | 0.774 | 0.363 | 6e-80 | |
| DICTYBASE|DDB_G0289081 | 1279 | DDB_G0289081 "phospholipid/gly | 0.312 | 0.139 | 0.314 | 1.3e-36 | |
| UNIPROTKB|Q0P5J1 | 515 | FAR2 "Fatty acyl-CoA reductase | 0.449 | 0.497 | 0.258 | 1.4e-31 | |
| UNIPROTKB|F1SGA0 | 515 | FAR2 "Uncharacterized protein" | 0.443 | 0.491 | 0.259 | 2.6e-31 |
| TAIR|locus:2134278 CER4 "ECERIFERUM 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1288 (458.5 bits), Expect = 2.4e-131, P = 2.4e-131
Identities = 244/487 (50%), Positives = 337/487 (69%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
ME+ SV+++L+NK+ILV G GF+A +F+EKILRV PNVKKLYL +RA+ SA RF +
Sbjct: 5 MEVVSVLKYLDNKSILVVGAAGFLANIFVEKILRVAPNVKKLYLLLRASKGKSATQRFND 64
Query: 61 EVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120
E+L KD+F VLKEK+G LN SEKIT V GDI EDLGL+D +L E+ +++D +VN
Sbjct: 65 EILKKDLFKVLKEKYGPNLNQLTSEKITIVDGDICLEDLGLQDFDLAHEMIHQVDAIVNL 124
Query: 121 AAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP--- 177
AA TKFDERYDVA GINTLG ++++NFAK+C K+K+ VHVSTAYV GE++GLI+E P
Sbjct: 125 AATTKFDERYDVALGINTLGALNVLNFAKRCAKVKILVHVSTAYVCGEKSGLIMETPYRM 184
Query: 178 ---LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234
L+G +GLD + E K++ +KL++L+ GA + IT MK+LG RAK++GWPNTYVFT
Sbjct: 185 GETLNGTTGLDINYEKKLVQEKLDQLRVIGAAPETITETMKDLGLRRAKMYGWPNTYVFT 244
Query: 235 KTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG 294
K MGEM++ +ENLSLV++RP++++ T+KEPFPGW E ++TI++L V +G L C +
Sbjct: 245 KAMGEMMVGTKRENLSLVLLRPSIITSTFKEPFPGWTEGIRTIDSLAVGYGKGKLTCFLC 304
Query: 295 ETKXXXXXXXXXXXXXXXXXXXXXHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354
+ A + + IYHVGSSLRNP+ + + YF+
Sbjct: 305 DLDAVSDVMPADMVVNSILVSMAAQAGKQEEI-IYHVGSSLRNPMKNSKFPELAYRYFSI 363
Query: 355 KPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQVANTVFHNFFKGVYNDLRK 414
KPW NK+GK VKV I + SS+ SFH YM IRYL+ LKGL++ N + F+ + K
Sbjct: 364 KPWTNKEGKVVKVGAIEILSSMRSFHRYMTIRYLIALKGLELVNIILCKLFEKEFQYFNK 423
Query: 415 KVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYFMNT 474
K+ F+ R+V++Y+PY +F GIFDD+NTEKLR + E ++FYFDP ++W DYF+NT
Sbjct: 424 KINFIFRLVDLYQPYLFFYGIFDDSNTEKLRKMVSKTGVENEMFYFDPKVLDWDDYFLNT 483
Query: 475 HIPGVEK 481
H+ G+ K
Sbjct: 484 HVIGLLK 490
|
|
| TAIR|locus:2076028 FAR4 "fatty acid reductase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1201 (427.8 bits), Expect = 4.0e-122, P = 4.0e-122
Identities = 232/481 (48%), Positives = 323/481 (67%)
Query: 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKD 66
++FL +KTILV+GV GF+AKVF+EKILR+QP VKKL+L +RAAD +SA RF +EVL KD
Sbjct: 6 IQFLHDKTILVTGVPGFLAKVFVEKILRIQPKVKKLFLLLRAADNESAMQRFHSEVLEKD 65
Query: 67 VFNVLKEKWGTR-LNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK 125
+F VLK G L +FI+EK+ +PGDIS ++LG+K S+L + +WNE+DI+VN AA T
Sbjct: 66 LFRVLKNALGDENLKAFITEKVVPIPGDISVDNLGVKGSDLLQHMWNEIDIIVNVAATTN 125
Query: 126 FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP------LD 179
FDERYDV +NT G ++++NFAKKCVK ++ +HVSTAYV GE++GL+ E L+
Sbjct: 126 FDERYDVGLSVNTFGPLNVLNFAKKCVKGQLLLHVSTAYVRGEKSGLLHEKTFHMGETLN 185
Query: 180 GASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239
G L + EM+++ QKL EL+ + ++EI+ MK+LG RAKLHGWPNTYVFTK+MGE
Sbjct: 186 GHRKLVIETEMELMKQKLKELQKQNCSEEEISQSMKDLGMSRAKLHGWPNTYVFTKSMGE 245
Query: 240 MLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKXX 299
ML+ +ENL +VIIRPT+++ T+ EPFPGW+E L+TI+++ VA +G L+C + +
Sbjct: 246 MLLGNYRENLPIVIIRPTMITSTFSEPFPGWIEGLRTIDSVIVAYGKGRLKCFLADPNSV 305
Query: 300 XXXXXXXXXXXXXXXXXXXHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWIN 359
HA + +YHVGSS +NP+T I D YFTK P +
Sbjct: 306 LDLIPVDMVANAMVTAAAIHAGKLGSQTVYHVGSSCKNPITFEQIHDLAASYFTKNPLVR 365
Query: 360 KQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQVANTVFHNFFKGVYNDLRKKVKFV 419
+ G + VSK + S++A F YM +RY LPL+ L++ ++ + Y D+ +K+K
Sbjct: 366 RDGSSILVSKGTILSTMAQFSFYMTLRYKLPLQMLRLIYVIYPWWNGNKYKDIDRKIKLA 425
Query: 420 MRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTET-DLFYFDPDSIEWSDYFMNTHIPG 478
MR+V++Y+PY F GIFDDTNTEKLR+ + E LF FDP SI+W DY HIPG
Sbjct: 426 MRLVDLYRPYVLFKGIFDDTNTEKLRLKRKEINKEMYGLFEFDPKSIDWEDYMTTIHIPG 485
Query: 479 V 479
+
Sbjct: 486 L 486
|
|
| TAIR|locus:2171107 FAR1 "fatty acid reductase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1182 (421.1 bits), Expect = 4.1e-120, P = 4.1e-120
Identities = 238/494 (48%), Positives = 327/494 (66%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
ME + V+FL NKTIL++G GF+AKV +EKILR+QPNVKK+YL +RA D SA R ++
Sbjct: 1 ME-SNCVQFLGNKTILITGAPGFLAKVLVEKILRLQPNVKKIYLLLRAPDEKSAMQRLRS 59
Query: 61 EVLAKDVFNVLKEKWGT-RLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVN 119
EV+ D+F VL+ G LN+ + EKI VPGDIS ++LGLKD++L + +W+E+DI++N
Sbjct: 60 EVMEIDLFKVLRNNLGEDNLNALMREKIVPVPGDISIDNLGLKDTDLIQRMWSEIDIIIN 119
Query: 120 SAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP-- 177
AA T FDERYD+ GINT G ++++NFAKKCVK ++ +HVSTAY++GE+ GL+LE P
Sbjct: 120 IAATTNFDERYDIGLGINTFGALNVLNFAKKCVKGQLLLHVSTAYISGEQPGLLLEKPFK 179
Query: 178 ----LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233
L G LD + E ++ QKL EL+ +EI+ MK+ G RAKLHGWPNTYVF
Sbjct: 180 MGETLSGDRELDINIEHDLMKQKLKELQD--CSDEEISQTMKDFGMARAKLHGWPNTYVF 237
Query: 234 TKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLV 293
TK MGEMLM + +ENL LVIIRPT+++ T EPFPGW+E LKT++++ VA +G L+C +
Sbjct: 238 TKAMGEMLMGKYRENLPLVIIRPTMITSTIAEPFPGWIEGLKTLDSVIVAYGKGRLKCFL 297
Query: 294 GETKXXXXXXXXXXXXXXXXXXXXXHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFT 353
++ H+ IYHVGSS +NPVT + D+ YF
Sbjct: 298 ADSNSVFDLIPADMVVNAMVAAATAHSGDTGIQAIYHVGSSCKNPVTFGQLHDFTARYFA 357
Query: 354 KKPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQVANTVFHNFFKGVYNDLR 413
K+P I + G P+ V K + S++A F YM +RY LPL+ L++ N V+ Y+DL
Sbjct: 358 KRPLIGRNGSPIIVVKGTILSTMAQFSLYMTLRYKLPLQILRLINIVYPWSHGDNYSDLS 417
Query: 414 KKVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETD-LFYFDPDSIEWSDYFM 472
+K+K MR+VE+Y+PY F GIFDD NTE+LRM + + E D F FDP SI+W +Y
Sbjct: 418 RKIKLAMRLVELYQPYLLFKGIFDDLNTERLRMKRKENIKELDGSFEFDPKSIDWDNYIT 477
Query: 473 NTHIPG-VEKLLQQ 485
NTHIPG + +L+Q
Sbjct: 478 NTHIPGLITHVLKQ 491
|
|
| TAIR|locus:2076023 FAR5 "fatty acid reductase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1152 (410.6 bits), Expect = 6.2e-117, P = 6.2e-117
Identities = 232/490 (47%), Positives = 321/490 (65%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
MEL + V+FL NKTILV+G TGF+AKVF+EKILRVQPNVKKLYL VRA+D ++A R +
Sbjct: 1 MEL-NCVQFLRNKTILVTGATGFLAKVFVEKILRVQPNVKKLYLLVRASDNEAATKRLRT 59
Query: 61 EVLAKDVFNVLKEKWGT-RLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVN 119
EV K++F VL++ G +LN+ + EK+ VPGDI+++ LG+ DS+L+E + E+DI+VN
Sbjct: 60 EVFEKELFKVLRQNLGDEKLNTLLYEKVVSVPGDIATDQLGINDSHLRERMQKEIDIVVN 119
Query: 120 SAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP-- 177
AA T FDERYDV GINT G ++++NFAKKCVK+++ +HVSTAYV GE+ GLI E P
Sbjct: 120 VAATTNFDERYDVGLGINTFGALNVLNFAKKCVKVQLLLHVSTAYVCGEKPGLIPEKPFI 179
Query: 178 ---LDGASGL--DFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232
+ +GL D + E +++ Q+L EL + +++ITL MK LG ERAKLHGWPNTYV
Sbjct: 180 MEEIRNENGLQLDINLERELMKQRLKELNEQDCSEEDITLSMKELGMERAKLHGWPNTYV 239
Query: 233 FTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL 292
FTK+MGEML+ + KENL LVIIRPT+++ T EPFPGW+E L+T++++ +A +G L+C
Sbjct: 240 FTKSMGEMLLGKHKENLPLVIIRPTMITSTLSEPFPGWIEGLRTVDSVIIAYGKGVLKCF 299
Query: 293 VGETKXXXXXXXXXXXXXXXXXXXXXHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYF 352
+ + HA +YHVGSS +NPVT I + YF
Sbjct: 300 LVDVNSVCDMIPVDMVANAMITAAAKHAGGSGVHMVYHVGSSHQNPVTFGEIHEIAVRYF 359
Query: 353 TKKPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQVANTVFHNFFKGVYNDL 412
TK P ++ G + VSK+ ++A F YM +RY LPL+ L++ + ++ Y D
Sbjct: 360 TKNPLRSRNGSLITVSKVRFIPTMALFSLYMTLRYKLPLQLLKLVDIIYPWRNGDKYGDK 419
Query: 413 RKKVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSR---TETDLFYFDPDSIEWSD 469
+K++ VMR+VE+Y+PY F GIFDD NT+ L + TE +F FDP I W D
Sbjct: 420 NRKIELVMRLVELYEPYVLFKGIFDDRNTKSLCANQKEEEIKNTEKLMFDFDPKGINWGD 479
Query: 470 YFMNTHIPGV 479
Y N HI G+
Sbjct: 480 YLTNIHISGL 489
|
|
| TAIR|locus:2076038 FAR8 "fatty acid reductase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1129 (402.5 bits), Expect = 1.7e-114, P = 1.7e-114
Identities = 226/490 (46%), Positives = 317/490 (64%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
ME S V FL+NKTILV+G TGF+AKVF+EKILRVQPNV KLYL VRA+D ++A R +
Sbjct: 1 MEF-SCVHFLQNKTILVTGATGFLAKVFVEKILRVQPNVNKLYLVVRASDNEAATKRLRT 59
Query: 61 EVLAKDVFNVLKEKWGT-RLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVN 119
E KD+F VL++ G +LN+ +SEK+ V GDI+ + LG+KDSNL+E + E+DI+VN
Sbjct: 60 EAFEKDLFKVLRDNLGDEKLNTLLSEKVVPVAGDIAMDHLGMKDSNLRERMQKEIDIVVN 119
Query: 120 SAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPL- 178
AA T FDERYD+ GINT G ++++NFAKKCVK ++ +HVSTAYV GE+ GL+ E P
Sbjct: 120 VAATTNFDERYDIGLGINTFGALNVLNFAKKCVKAQLLLHVSTAYVCGEKPGLLPEKPFV 179
Query: 179 ------DGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232
+ LD + E +++ Q+L EL +G ++ T +MK LG ERAKLHGWPNTYV
Sbjct: 180 MEEICNENGLQLDINLERELMKQRLKELNEQGCSEEGTTFYMKELGMERAKLHGWPNTYV 239
Query: 233 FTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL 292
FTK+MGEML+ KENL LVIIRPT+++ T EPFPGW+E L+T++++ +A +G L+C
Sbjct: 240 FTKSMGEMLLGNHKENLPLVIIRPTMITSTLFEPFPGWIEGLRTVDSVIIAYGKGVLKCF 299
Query: 293 VGETKXXXXXXXXXXXXXXXXXXXXXHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYF 352
+ + HA +Y VGSS +NP+ I + F YF
Sbjct: 300 LVDVNSVCDMIPADMVANAMIAAAATHAGGSKVHMVYQVGSSHQNPIIYGEIREILFCYF 359
Query: 353 TKKPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQVANTVFHNFFKGVYNDL 412
TK ++ G + VSK+ L ++A F YM IRY LP++ L++ + ++ + Y +
Sbjct: 360 TKNSLRSRNGSMITVSKMKLIPTLALFSLYMTIRYKLPVQLLKLVDIIYPSREGDEYKNK 419
Query: 413 RKKVKFVMRVVEIYKPYFYFNGIFDDTNTEKL--RMTARGSR-TETDLFYFDPDSIEWSD 469
+K+ VMR+V++Y+PY F GIFDD NT+ L + +R +E +F FDP I+W D
Sbjct: 420 NRKIDMVMRLVKLYEPYVLFKGIFDDRNTKNLCAKQKEEDNRNSENFMFDFDPKIIKWKD 479
Query: 470 YFMNTHIPGV 479
Y +N HIPG+
Sbjct: 480 YLINVHIPGL 489
|
|
| TAIR|locus:2176407 FAR7 "fatty acid reductase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 697 (250.4 bits), Expect = 1.9e-85, Sum P(2) = 1.9e-85
Identities = 142/365 (38%), Positives = 212/365 (58%)
Query: 114 LDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLI 173
L ++V ++ ++RYDVA GINT G I+++NFAKKCVK K+ +HVST YV GER G I
Sbjct: 41 LYLLVRASDKKSAEQRYDVALGINTFGAINVLNFAKKCVKPKLLLHVSTVYVCGERPGHI 100
Query: 174 LEN------PLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227
+E L+G + +D + E ++ DQK + K +G ++E MK+ G +RA+L+GW
Sbjct: 101 VEKHFAMGESLNGKNKVDINTERRLADQKSKQFKEQGCSEEETEQAMKDFGLKRARLYGW 160
Query: 228 PNTYVFTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQG 287
PNTYVFTK MGEML+ +E + +VIIRPT+++ T+ +PFPGW+E LKT++++ + +G
Sbjct: 161 PNTYVFTKAMGEMLLGHYRETMPIVIIRPTIITSTFSDPFPGWIEGLKTVDSVIIFYGKG 220
Query: 288 NLRCLVGETKXXXXXXXXXXXXXXXXXXXXXHAKQPSDANIYHVGSSLRNPVTLVSILDY 347
L+C + + K H +YHVGSS +NPV I +
Sbjct: 221 ILKCFLVDQKTVCDIIPVDMVVNAMIAIAADHCHDSGSHTVYHVGSSNQNPVIYKQIYEM 280
Query: 348 GFVYFTKKPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQVANTVFHNFFKG 407
YF K P + + G + V K+ S++A F Y +RY LP++ L + + + + +
Sbjct: 281 MSRYFMKSPLVGRNGMLI-VPKVTRISTLARFRVYTNLRYKLPIQILGLLSVISLSQ-RD 338
Query: 408 VYNDLRKKVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEW 467
+ +K K MR+V++YKPY F GIFDD N E LR+ E LF +P I+W
Sbjct: 339 KFALHNRKFKMAMRLVKLYKPYVLFKGIFDDKNMETLRIKNEAKDMEK-LFGTNPKCIDW 397
Query: 468 SDYFM 472
DYFM
Sbjct: 398 EDYFM 402
|
|
| TAIR|locus:2088664 MS2 "MALE STERILITY 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 803 (287.7 bits), Expect = 6.0e-80, P = 6.0e-80
Identities = 183/504 (36%), Positives = 284/504 (56%)
Query: 3 LGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEV 62
LG ++ FL+ K L++G TGF+AKV IEK+LR+ P+V K+YL ++A ++A R +NEV
Sbjct: 122 LG-IISFLQGKKFLITGSTGFLAKVLIEKVLRMAPDVSKIYLLIKAKSKEAAIERLKNEV 180
Query: 63 LAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAA 122
L ++FN LKE G SF+ K+ V G+I ++GL+ ++ EE+ E+D+++NSAA
Sbjct: 181 LDAELFNTLKETHGASYMSFMLTKLIPVTGNICDSNIGLQ-ADSAEEIAKEVDVIINSAA 239
Query: 123 ITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP----- 177
T F+ERYDVA INT G +L+ FAKKC KLK+F+ VSTAYV G+R G I+E P
Sbjct: 240 NTTFNERYDVALDINTRGPGNLMGFAKKCKKLKLFLQVSTAYVNGQRQGRIMEKPFSMGD 299
Query: 178 -------LDG-ASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229
L+G LD D EMK+ E KG ++ MK+LG ERA+ +GW +
Sbjct: 300 CIATENFLEGNRKALDVDREMKLA----LEAARKGTQNQDEAQKMKDLGLERARSYGWQD 355
Query: 230 TYVFTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNL 289
TYVFTK MGEM++ ++ ++ +VIIRP+V+ TYK+PFPGW+E + ++ + + +G L
Sbjct: 356 TYVFTKAMGEMMINSTRGDVPVVIIRPSVIESTYKDPFPGWMEGNRMMDPIVLCYGKGQL 415
Query: 290 RCLVGETKXXXXXXXXXXXXXXXXXXXXXHAKQPSDA----NIYHVGSSLRNPVTLVSIL 345
+ + K H SD N+Y + SS NP+ +
Sbjct: 416 TGFLVDPKGVLDVVPADMVVNATLAAIAKHGMAMSDPEPEINVYQIASSAINPLVFEDLA 475
Query: 346 DYGFVYFTKKPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQVA-NTVFHNF 404
+ + ++ P ++ +G P+ V + LF+S+ F ++ R GL ++V
Sbjct: 476 ELLYNHYKTSPCMDSKGDPIMVRLMKLFNSVDDFSDHLW-RDAQERSGLMSGMSSVDSKM 534
Query: 405 FKGVYNDLRKKVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDS 464
+ + +K V+ + IY+PY ++ G FD++NT++L S E F FD S
Sbjct: 535 MQKLKFICKKSVEQAKHLATIYEPYTFYGGRFDNSNTQRLMENM--SEDEKREFGFDVGS 592
Query: 465 IEWSDYFMNTHIPGVEKLLQQKRS 488
I W+DY N HIPG+ + + + R+
Sbjct: 593 INWTDYITNVHIPGLRRHVLKGRA 616
|
|
| DICTYBASE|DDB_G0289081 DDB_G0289081 "phospholipid/glycerol acyltransferase domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 267 (99.0 bits), Expect = 1.3e-36, Sum P(2) = 1.3e-36
Identities = 60/191 (31%), Positives = 110/191 (57%)
Query: 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAK 65
+ F KT+L++G TGFV KV +EK++R P+++K+Y+ +R +A RF+ ++L
Sbjct: 4 LANFYAGKTVLITGATGFVGKVLLEKMVRDLPDIEKIYIIIRG----NAKERFEEDILQS 59
Query: 66 DVFNVLKEKWG-TRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAIT 124
+++ K K G N+ I K+ + GD+S E LGL + + + ++++++++ AA
Sbjct: 60 RIWDTCKAKMGEAAFNAHIHNKVVAIGGDLSKEGLGLSSEDYQTVV-DQVNVIIHCAASI 118
Query: 125 KFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILEN-PLDGASG 183
F ER D A N +++++ +K+ + +VH STAYV R G + E P+
Sbjct: 119 DFRERLDKAISSNLYASLNMLDLSKRLKNVVAYVHCSTAYVNSNREGWLDEELPV----- 173
Query: 184 LDFDAEMKVID 194
LDF+ E +++D
Sbjct: 174 LDFNPE-EMVD 183
|
|
| UNIPROTKB|Q0P5J1 FAR2 "Fatty acyl-CoA reductase 2" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 217 (81.4 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 72/278 (25%), Positives = 123/278 (44%)
Query: 223 KLHG-WPNTYVFTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLF 281
KL G WPNTY +TK +GE+++QQ NL++ IIRP+++ T++EPFPGWV++L + L
Sbjct: 195 KLIGDWPNTYTYTKALGEVVVQQEGGNLNIAIIRPSIMGATWQEPFPGWVDNLNGPSGLI 254
Query: 282 VASAQGNLRCLVGETKXXXXXXXXXXXXXXXXXXXXXHA-KQPSDANIYHVGSSLRNPVT 340
+A+ +G LR + A +P +YH S NP
Sbjct: 255 IAAGKGFLRSIRATPMAVADLIPADTVVNLTLAVGWYTAVHRPKSTLVYHCTSGNLNPCN 314
Query: 341 LVSILDYGFVYFTKKPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQVANTV 400
+ F K P+ +P + ++I + H + + + P +
Sbjct: 315 WGKMGLQVLATFEKIPFERAFRRP---NADFTTNNITT-HYWNAVSHRAP--------AI 362
Query: 401 FHNFFKGVYNDLRKKVKFVMRVVEIYKPYFYF-NGIFD-DT-NTEKLRMTARGSRTETDL 457
++F+ + + K + R++ YF N ++ T NTE L S + +
Sbjct: 363 IYDFYLRLTGRKPRMTKLMNRLLRTLSMLEYFVNRSWEWSTYNTEMLMSEL--SPEDQRV 420
Query: 458 FYFDPDSIEWSDYFMNTHIPGVEKLL--QQKRSFPKTK 493
F FD + W +Y N ++ GV+K L + P+ K
Sbjct: 421 FNFDVRQLNWLEYIEN-YVLGVKKYLLKEDMAGIPEAK 457
|
|
| UNIPROTKB|F1SGA0 FAR2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 222 (83.2 bits), Expect = 2.6e-31, Sum P(2) = 2.6e-31
Identities = 70/270 (25%), Positives = 117/270 (43%)
Query: 228 PNTYVFTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQG 287
PNTY +TK +GEM++QQ N+++ IIRP++V T++EPFPGWV++L + L +A+ +G
Sbjct: 201 PNTYTYTKALGEMVVQQESGNINIAIIRPSIVGATWQEPFPGWVDNLNGPSGLIIAAGKG 260
Query: 288 NLRCLVGETKXXXXXXXXXXXXXXXXXXXXXHA-KQPSDANIYHVGSSLRNPVTLVSILD 346
LRC+ A +P IYH S NP +
Sbjct: 261 FLRCVRATPMAVADLIPADTVVNLTLAVGWYTAVHRPKSVLIYHCTSGNFNPCNWGKMAL 320
Query: 347 YGFVYFTKKPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQVANTVFHNFFK 406
F K P+ +P + +SI I+Y + A + ++F+
Sbjct: 321 QVLAAFEKIPFERAFRRP---NADFTTNSIT-------IQYWNAVS--HRAPAIIYDFYL 368
Query: 407 GVYNDLRKKVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMT-ARGSRTETDLFYFDPDSI 465
+ + K + R++ YF + +T+ M + S + +F FD +
Sbjct: 369 RLTGRKPRMTKLMNRLLRTVSMLEYFINRSWEWSTDNTEMLMSELSPEDQRVFNFDVRQL 428
Query: 466 EWSDYFMNTHIPGVEKLL--QQKRSFPKTK 493
W +Y N ++ GV+K L + PK K
Sbjct: 429 NWLEYIEN-YVLGVKKYLLKEDMAGIPKAK 457
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q93ZB9 | FACR3_ARATH | 1, ., 2, ., 1, ., n, 2 | 0.5236 | 0.8421 | 0.9736 | yes | no |
| Q9XGY7 | FAR_SIMCH | 1, ., 2, ., 1, ., 8, 4 | 0.5567 | 0.8385 | 0.9695 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 570 | |||
| PLN02996 | 491 | PLN02996, PLN02996, fatty acyl-CoA reductase | 0.0 | |
| PLN02503 | 605 | PLN02503, PLN02503, fatty acyl-CoA reductase 2 | 1e-138 | |
| cd05236 | 320 | cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F | 1e-104 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 9e-79 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 1e-23 | |
| cd05235 | 290 | cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | 7e-20 | |
| TIGR01746 | 367 | TIGR01746, Thioester-redct, thioester reductase do | 8e-18 | |
| cd09071 | 92 | cd09071, FAR_C, C-terminal domain of fatty acyl Co | 8e-13 | |
| COG3320 | 382 | COG3320, COG3320, Putative dehydrogenase domain of | 3e-12 | |
| TIGR03443 | 1389 | TIGR03443, alpha_am_amid, L-aminoadipate-semialdeh | 4e-10 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 5e-09 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 1e-08 | |
| pfam03015 | 94 | pfam03015, Sterile, Male sterility protein | 4e-08 | |
| COG1091 | 281 | COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C | 4e-06 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 4e-05 | |
| pfam04321 | 284 | pfam04321, RmlD_sub_bind, RmlD substrate binding d | 9e-05 | |
| COG1028 | 251 | COG1028, FabG, Dehydrogenases with different speci | 1e-04 | |
| cd05246 | 315 | cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra | 2e-04 | |
| TIGR01214 | 287 | TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase | 4e-04 | |
| TIGR01181 | 317 | TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd | 0.002 | |
| cd05254 | 280 | cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4 | 0.002 |
| >gnl|CDD|215538 PLN02996, PLN02996, fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Score = 740 bits (1913), Expect = 0.0
Identities = 293/487 (60%), Positives = 368/487 (75%), Gaps = 7/487 (1%)
Query: 2 ELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNE 61
E GS V+FLENKTILV+G TGF+AK+F+EKILRVQPNVKKLYL +RA+D SA R +E
Sbjct: 1 EEGSCVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDE 60
Query: 62 VLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSA 121
V+ KD+F VL+EK G LNS ISEK+T VPGDIS +DLG+KDSNL+EE+W E+DI+VN A
Sbjct: 61 VIGKDLFKVLREKLGENLNSLISEKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLA 120
Query: 122 AITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP---- 177
A T FDERYDVA GINTLG ++++NFAKKCVK+K+ +HVSTAYV GE++GLILE P
Sbjct: 121 ATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKSGLILEKPFHMG 180
Query: 178 --LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235
L+G LD + E K++ +KL EL + A ++EIT MK+LG ERAKLHGWPNTYVFTK
Sbjct: 181 ETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTK 240
Query: 236 TMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGE 295
MGEML+ KENL LVIIRPT+++ TYKEPFPGW+E L+TI+++ V +G L C + +
Sbjct: 241 AMGEMLLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLAD 300
Query: 296 TKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355
++DVIP DMVVNAMIVAM AHA IYHVGSSL+NPV ++ D+ + YF+K
Sbjct: 301 PNSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKN 360
Query: 356 PWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQVANTVFHNFFKGVYNDLRKK 415
PWINK+G PVKV K + S++ASF YM IRYLLPLK LQ+ N + + Y DL +K
Sbjct: 361 PWINKEGSPVKVGKGTILSTMASFSLYMTIRYLLPLKALQLVNIILPKRYGDKYTDLNRK 420
Query: 416 VKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARG-SRTETDLFYFDPDSIEWSDYFMNT 474
+K VMR+V++YKPY +F GIFDDTNTEKLR+ + + E D+F FDP SI+W DY N
Sbjct: 421 IKLVMRLVDLYKPYVFFKGIFDDTNTEKLRIKRKETGKEEADMFDFDPKSIDWEDYMTNV 480
Query: 475 HIPGVEK 481
HIPG+ K
Sbjct: 481 HIPGLVK 487
|
Length = 491 |
| >gnl|CDD|215279 PLN02503, PLN02503, fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Score = 415 bits (1067), Expect = e-138
Identities = 193/501 (38%), Positives = 297/501 (59%), Gaps = 28/501 (5%)
Query: 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAK 65
+ EFL K L++G TGF+AKV IEKILR P+V K+YL ++A D ++A R +NEV+
Sbjct: 113 IAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDA 172
Query: 66 DVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK 125
++F L+E G SF+ K+ V G++ +LGL + +L +E+ E+D+++NSAA T
Sbjct: 173 ELFKCLQETHGKSYQSFMLSKLVPVVGNVCESNLGL-EPDLADEIAKEVDVIINSAANTT 231
Query: 126 FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPL------- 178
FDERYDVA INT G HL++FAKKC KLK+F+ VSTAYV G+R G I+E P
Sbjct: 232 FDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIA 291
Query: 179 ----------DGASGLDFDAEMKV-IDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227
LD +AE+K+ +D K + ++ QK MK+LG ERAKL+GW
Sbjct: 292 RELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQK-----MKDLGLERAKLYGW 346
Query: 228 PNTYVFTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQG 287
+TYVFTK MGEM++ + ++ +VIIRP+V+ T+K+PFPGW+E + ++ + + +G
Sbjct: 347 QDTYVFTKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKG 406
Query: 288 NLRCLVGETKVIMDVIPVDMVVNAMIVAMVAH-AKQPSDANIYHVGSSLRNPVTLVSILD 346
L + + ++DV+P DMVVNA + AM H + N+Y + SS+ NP+ +
Sbjct: 407 QLTGFLADPNGVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLAR 466
Query: 347 YGFVYFTKKPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQVANTVFHNFFK 406
+ ++ P+++ +G+P+ V + LFSS+ F ++ R L GL ++ +
Sbjct: 467 LLYEHYKSSPYMDSKGRPIHVPPMKLFSSMEDFSSHLW-RDALLRSGLAGMSSSDRKLSQ 525
Query: 407 GVYNDLRKKVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIE 466
+ N K V+ + IY+PY ++ G FD++NT++L R S E F FD SI+
Sbjct: 526 KLENICAKSVEQAKYLASIYEPYTFYGGRFDNSNTQRL--MERMSEEEKAEFGFDVGSID 583
Query: 467 WSDYFMNTHIPGVEKLLQQKR 487
W DY N HIPG+ + + + R
Sbjct: 584 WRDYITNVHIPGLRRHVMKGR 604
|
Length = 605 |
| >gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 315 bits (809), Expect = e-104
Identities = 129/345 (37%), Positives = 189/345 (54%), Gaps = 26/345 (7%)
Query: 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLK 72
K++L++G TGF+ KV +EK+LR P++ K+YL +R SA R + + K
Sbjct: 1 KSVLITGATGFLGKVLLEKLLRSCPDIGKIYLLIRGKSGQSAEERLRELLKDKL------ 54
Query: 73 EKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDV 132
G LN KI + GD+S +LGL D +L + L E++I+++ AA FDER D
Sbjct: 55 FDRGRNLNPLFESKIVPIEGDLSEPNLGLSDEDL-QTLIEEVNIIIHCAATVTFDERLDE 113
Query: 133 AFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKV 192
A IN LG + L+ AK+C KLK FVHVSTAYV G+R LI E D ++
Sbjct: 114 ALSINVLGTLRLLELAKRCKKLKAFVHVSTAYVNGDRQ-LIEEKVY--PPPAD-PEKLID 169
Query: 193 IDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLV 252
I + +++L+ + A K L G PNTY FTK + E L+ + + NL LV
Sbjct: 170 ILELMDDLELERATPK--------------LLGGHPNTYTFTKALAERLVLKERGNLPLV 215
Query: 253 IIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312
I+RP++V T KEPFPGW+++ + LF+A +G LR + + + D+IPVD+V NA+
Sbjct: 216 IVRPSIVGATLKEPFPGWIDNFNGPDGLFLAYGKGILRTMNADPNAVADIIPVDVVANAL 275
Query: 313 IVAMVAHA-KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356
+ A ++P + +YH GSS NP T + Y K P
Sbjct: 276 LAAAAYSGVRKPRELEVYHCGSSDVNPFTWGEAEELINQYLKKNP 320
|
SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 247 bits (634), Expect = 9e-79
Identities = 97/297 (32%), Positives = 143/297 (48%), Gaps = 53/297 (17%)
Query: 17 VSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWG 76
++G TGF+ KV +EK+LR P VK +Y VRA D +SA R + E+L +F+ LK
Sbjct: 1 LTGATGFLGKVLLEKLLRSTPEVK-IYCLVRAKDGESALERLRQELLKYGLFDRLK---- 55
Query: 77 TRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGI 136
E+I V GD+S +LGL D + +EL E+D+++++AA F E Y
Sbjct: 56 ------ALERIIPVAGDLSEPNLGLSDEDF-QELAEEVDVIIHNAATVNFVEPYSDLRAT 108
Query: 137 NTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQK 196
N LG ++ AK+ K F HVSTAYV GER GL+ E P
Sbjct: 109 NVLGTREVLRLAKQM-KKLPFHHVSTAYVNGERGGLLEEKP------------------- 148
Query: 197 LNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLVIIRP 256
K E A L G PN Y +K + E L++++ L +VI RP
Sbjct: 149 -----------------YKLDEDEPALLGGLPNGYTQSKWLAEQLVREAAGGLPVVIYRP 191
Query: 257 TVVSGTYKEPFPGWVEDLKTINTLFVASAQ-GNLRCLVGETKVIMDVIPVDMVVNAM 312
++++G E GW+ + A G L ++G+ +D++PVD V NA+
Sbjct: 192 SIITG---ESRTGWINGDDFGPRGLLGGAGLGVLPDILGDPDARLDLVPVDYVANAI 245
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 1e-23
Identities = 71/333 (21%), Positives = 128/333 (38%), Gaps = 76/333 (22%)
Query: 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEK 74
+ V+G TGF+ + ++++L N K+ + VR+ + E
Sbjct: 1 VFVTGGTGFLGRHLVKRLL---ENGFKVLVLVRSES--LGEAHERIEEA----------- 44
Query: 75 WGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAF 134
++++ + GD++ +LGL + +E ++D +++ AA F + A+
Sbjct: 45 ------GLEADRVRVLEGDLTQPNLGLSAAASRELA-GKVDHVIHCAASYDFQAPNEDAW 97
Query: 135 GINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVID 194
N G H++ A + ++ F +VSTAYVAG R G I E L+
Sbjct: 98 RTNIDGTEHVLELAARL-DIQRFHYVSTAYVAGNREGNIRETELNPGQNF---------- 146
Query: 195 QKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLVII 254
N Y +K E L++ + + L +
Sbjct: 147 ---------------------------------KNPYEQSKAEAEQLVRAAATQIPLTVY 173
Query: 255 RPTVVSGTYKEPFPGWVEDLKTINTLFVASA-QGNLRCLVGETKVIMDVIPVDMVVNAMI 313
RP++V G K G +E + + L A G + G ++++PVD V +A I
Sbjct: 174 RPSIVVGDSKT---GRIEKIDGLYELLNLLAKLGRWLPMPGNKGARLNLVPVDYVADA-I 229
Query: 314 VAMVAHAKQPSDANIYHVGSSLRNPVTLVSILD 346
V + + I+H+ P TL I D
Sbjct: 230 VYLSKKPEANGQ--IFHLTD--PTPQTLREIAD 258
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 90.0 bits (224), Expect = 7e-20
Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Query: 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKE 73
T+L++G TGF+ + ++L+ + NV K+Y VRA D ++A R + LKE
Sbjct: 1 TVLLTGATGFLGAYLLRELLK-RKNVSKIYCLVRAKDEEAALERLID---------NLKE 50
Query: 74 KWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVA 133
+ +I V GD+S +LGL D + +EL E+D+++++ A + Y+
Sbjct: 51 YGLNLWDELELSRIKVVVGDLSKPNLGLSDDD-YQELAEEVDVIIHNGANVNWVYPYEEL 109
Query: 134 FGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG--ERTGL-------ILENPLDGASG 183
N LG L+ A KLK VST V E L +LE+ +G
Sbjct: 110 KPANVLGTKELLKLAAT-GKLKPLHFVSTLSVFSAEEYNALDDEESDDMLESQNGLPNG 167
|
This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290 |
| >gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain | Back alignment and domain information |
|---|
Score = 85.2 bits (211), Expect = 8e-18
Identities = 75/364 (20%), Positives = 135/364 (37%), Gaps = 88/364 (24%)
Query: 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKE 73
T+L++G TGF+ +E++LR K + VRAA + A R + + + +
Sbjct: 1 TVLLTGATGFLGAYLLEELLRRSTQAK-VICLVRAASEEHAMERLREALRSYRL------ 53
Query: 74 KWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVA 133
W E+I V GD+S LGL D+ E L +D +V++ A+ + Y
Sbjct: 54 -WHE---DLARERIEVVAGDLSEPRLGLSDAEW-ERLAENVDTIVHNGALVNWVYPYSEL 108
Query: 134 FGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV--AGERTGLILENPLDGASGLDFDAEMK 191
G N LG ++ A + K +VST V A + + + ++
Sbjct: 109 RGANVLGTREVLRLAAS-GRAKPLHYVSTISVGAAIDLSTVTEDDATVTPPP-------- 159
Query: 192 VIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKEN-LS 250
G Y +K + E+L++++ + L
Sbjct: 160 ----------------------------------GLAGGYAQSKWVAELLVREASDRGLP 185
Query: 251 LVIIRPTVVSGTYKEPFPGWVEDLKT--INT----LFVASAQGNLRCLVGETKVIMDVIP 304
+ I+RP + G + T IN+ + L ++ D+ P
Sbjct: 186 VTIVRPGRILG-----------NSYTGAINSSDILWRMVKGCLALGAYPQSPELTEDLTP 234
Query: 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWINKQGKP 364
VD V A IV + + + ++HV + PV+L LD W+ + G
Sbjct: 235 VDFVARA-IVVLSSRPAASAGGPVFHVVN--PEPVSLDEFLD----------WLERAGYN 281
Query: 365 VKVS 368
+++
Sbjct: 282 LRLV 285
|
This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367 |
| >gnl|CDD|176924 cd09071, FAR_C, C-terminal domain of fatty acyl CoA reductases | Back alignment and domain information |
|---|
Score = 64.1 bits (157), Expect = 8e-13
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 385 IRYLLPLKGLQVANTVFHNFFKGVYNDLRKKVKFVMRVVEIYKPYFYFNGIFDDTNTEKL 444
+LLP L + + G L K + + +++++ + + FD+ NT L
Sbjct: 1 FLHLLPAYLLDLLLRLL-----GRKPRLLKLYRKIHKLLDLLEYFTTNEWRFDNDNTRAL 55
Query: 445 RMTARGSRTETDLFYFDPDSIEWSDYFMNTHIPGVEKLL 483
S + +LF FD SI+W DYF N +IPG+ K L
Sbjct: 56 WERL--SEEDRELFNFDIRSIDWDDYFEN-YIPGLRKYL 91
|
C-terminal domain of fatty acyl CoA reductases, a family of SDR-like proteins. SDRs or short-chain dehydrogenases/reductases are Rossmann-fold NAD(P)H-binding proteins. Many proteins in this FAR_C family may function as fatty acyl-CoA reductases (FARs), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as the biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. The function of this C-terminal domain is unclear. Length = 92 |
| >gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 68.2 bits (167), Expect = 3e-12
Identities = 65/339 (19%), Positives = 131/339 (38%), Gaps = 65/339 (19%)
Query: 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLK 72
+ +L++G TGF+ + ++L K+ VRA ++A R + D++
Sbjct: 1 RNVLLTGATGFLGAYLLLELLDRSD--AKVICLVRAQSDEAALARLEK---TFDLYRHWD 55
Query: 73 EKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDV 132
E ++++ V GD++ DLGL + +EL +D+++++AA+ Y
Sbjct: 56 ELS--------ADRVEVVAGDLAEPDLGLSERTW-QELAENVDLIIHNAALVNHVFPYSE 106
Query: 133 AFGINTLGVIHLVNFAKKCV-KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMK 191
G N LG ++ A K K +VS+ V + +F +
Sbjct: 107 LRGANVLGTAEVLRLA--ATGKPKPLHYVSSISV------------GETEYYSNFTVDFD 152
Query: 192 VIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKEN-LS 250
I N G Y +K + E L++++ + L
Sbjct: 153 EISPTRN------------------------VGQGLAGGYGRSKWVAEKLVREAGDRGLP 188
Query: 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310
+ I RP ++G + G + + L + Q L +++ +D++PVD V
Sbjct: 189 VTIFRPGYITGDSRT---GALNTRDFLTRLVLGLLQ--LGIA-PDSEYSLDMLPVDHVAR 242
Query: 311 AMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGF 349
A++ + Q ++A I +G+ + +L +
Sbjct: 243 AVVAP----SVQVAEA-IAALGAHSDIRFNQLHMLTHPD 276
|
Length = 382 |
| >gnl|CDD|234212 TIGR03443, alpha_am_amid, L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 62.4 bits (152), Expect = 4e-10
Identities = 79/351 (22%), Positives = 137/351 (39%), Gaps = 68/351 (19%)
Query: 11 ENKTILVSGVTGFVAKVFIEKIL--RVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVF 68
T+ ++G TGF+ + +L R N K ++ VRA ++ R + ++
Sbjct: 970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFK-VFAHVRAKSEEAGLERLRKTGTTYGIW 1028
Query: 69 NVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDE 128
E+W + +I V GD+S E GL D +L NE+D+++++ A+ +
Sbjct: 1029 ---DEEW--------ASRIEVVLGDLSKEKFGLSDEKWS-DLTNEVDVIIHNGALVHWVY 1076
Query: 129 RYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDA 188
Y N +G I+++N + K K F VS+ S LD +
Sbjct: 1077 PYSKLRDANVIGTINVLNLCAEG-KAKQFSFVSS------------------TSALDTEY 1117
Query: 189 EMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML-MQQSKE 247
+ + D+ + G P+ + +L L Y +K + E + + K
Sbjct: 1118 YVNLSDELVQAGG-AGIPESD------DLMGSSKGLG---TGYGQSKWVAEYIIREAGKR 1167
Query: 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINT------LFVASAQGNLRCLVGETKVIMD 301
L I+RP V+G K NT + Q L + T V M
Sbjct: 1168 GLRGCIVRPGYVTGDSKT---------GATNTDDFLLRMLKGCIQLGLIPNINNT-VNM- 1216
Query: 302 VIPVDMVVNAMIVAMVA-HAKQPSDANIYHVGS--SLRNPVTLVSILDYGF 349
+PVD V A +V A + + S+ + HV +R L ++ YG+
Sbjct: 1217 -VPVDHV--ARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTYGY 1264
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. Length = 1389 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 58.8 bits (143), Expect = 5e-09
Identities = 45/192 (23%), Positives = 83/192 (43%), Gaps = 44/192 (22%)
Query: 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKE 73
V+G TGF+ + + ++L + +++ VR + R + L
Sbjct: 2 RYFVTGGTGFIGRRLVSRLLDRRRE-ATVHVLVRRQSLS----RLEA----------LAA 46
Query: 74 KWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVA 133
WG +++ + GD++ LGL ++++ E ++D +V+ AAI YD+
Sbjct: 47 YWGA-------DRVVPLVGDLTEPGLGLSEADIAE--LGDIDHVVHLAAI------YDLT 91
Query: 134 FG------INTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLD-- 185
N G ++V A++ ++ F HVS+ VAG+ G+ E+ D GL
Sbjct: 92 ADEEAQRAANVDGTRNVVELAER-LQAATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTP 150
Query: 186 -----FDAEMKV 192
F+AE V
Sbjct: 151 YHRTKFEAEKLV 162
|
Length = 657 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 55.0 bits (133), Expect = 1e-08
Identities = 50/225 (22%), Positives = 81/225 (36%), Gaps = 61/225 (27%)
Query: 114 LDIMVNSAAITKFDERYD---VAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170
LD++V+ AA+ +D F N +G ++L+ A+K +K FV+ S+A V G
Sbjct: 31 LDVVVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKA-GVKRFVYASSASVYGSPE 89
Query: 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230
GL P++E T P +
Sbjct: 90 GL---------------------------------PEEEETPPR-------------PLS 103
Query: 231 -YVFTKTMGEMLMQ--QSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQG 287
Y +K E L++ L +VI+R V G P D +N + +G
Sbjct: 104 PYGVSKLAAEHLLRSYGESYGLPVVILRLANVYG----PGQRPRLDGV-VNDFIRRALEG 158
Query: 288 NLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVG 332
+ G D I VD VV A++ A+ +Y++G
Sbjct: 159 KPLTVFGGGNQTRDFIHVDDVVRAILHAL---ENPLEGGGVYNIG 200
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|111859 pfam03015, Sterile, Male sterility protein | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 4e-08
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 411 DLRKKVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDY 470
L +K+ + +E+ +P+ IFD+ NT +LR S + LF FD +S++W +Y
Sbjct: 25 KLYRKIH---KGLEVLQPFSLNEWIFDNKNTRELREKM--SEEDKKLFNFDMESLDWDEY 79
Query: 471 FMNTHIPGVEKLL 483
F N I G+ K L
Sbjct: 80 FRN-AIRGIRKYL 91
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 94 |
| >gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 4e-06
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 108 EELWNEL--DIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVS 161
E+ E D+++N+AA T D ++AF +N G +L A + +L VH+S
Sbjct: 43 LEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARL---VHIS 99
Query: 162 TAYV-AGERTGLILE----NPLD--GAS 182
T YV GE+ G E NPL+ G S
Sbjct: 100 TDYVFDGEKGGPYKETDTPNPLNVYGRS 127
|
Length = 281 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 45.7 bits (108), Expect = 4e-05
Identities = 58/341 (17%), Positives = 105/341 (30%), Gaps = 98/341 (28%)
Query: 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLK 72
ILV+G GF+ +E++L +V R D L
Sbjct: 1 MRILVTGGAGFIGSHLVERLLAAGHDV---RGLDRLRDGLDPLL---------------- 41
Query: 73 EKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF----DE 128
+ FV D++ DL + E D +++ AA +
Sbjct: 42 ------------SGVEFVVLDLTDRDL------VDELAKGVPDAVIHLAAQSSVPDSNAS 83
Query: 129 RYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDA 188
+N G ++L+ A+ +K FV S+ V
Sbjct: 84 DPAEFLDVNVDGTLNLLEAARAA-GVKRFVFASSVSVVYG-------------------- 122
Query: 189 EMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ--SK 246
P E + L N Y +K E L++
Sbjct: 123 ------------DPPPLPIDEDLGPPRPL-----------NPYGVSKLAAEQLLRAYARL 159
Query: 247 ENLSLVIIRPTVVSGTYKEP-FPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305
L +VI+RP V G +P V + + + G+ D + V
Sbjct: 160 YGLPVVILRPFNVYGPGDKPDLSSGV----VSAFIRQLLKGEPIIVIGGDGSQTRDFVYV 215
Query: 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILD 346
D V +A+++A+ + D ++++GS +T+ + +
Sbjct: 216 DDVADALLLAL-----ENPDGGVFNIGSG-TAEITVRELAE 250
|
Length = 314 |
| >gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain | Back alignment and domain information |
|---|
Score = 44.1 bits (105), Expect = 9e-05
Identities = 50/228 (21%), Positives = 77/228 (33%), Gaps = 73/228 (32%)
Query: 115 DIMVNSAAITKFD--ERY-DVAFGINTLGVIHLVNFAKKCVKLKV-FVHVSTAYVAGERT 170
D++VN+AA T D E ++A+ +N LG +L A+ C +H+ST YV
Sbjct: 51 DVVVNAAAYTAVDKAESEPELAYAVNALGPGNL---AEACAARGAPLIHISTDYV----- 102
Query: 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKE--ITLFMKNLGTERAKLHGWP 228
FD KG P +E T P
Sbjct: 103 ---------------FDG-------------AKGGPYREDDPTG---------------P 119
Query: 229 -NTYVFTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDL-KTINTLFVASAQ 286
N Y TK GE + + +I+R V G Y F + L + L V Q
Sbjct: 120 LNVYGRTKLAGEQAVLAANPR--HLILRTAWVYGEYGNNFVKTMLRLAAERDELRVVDDQ 177
Query: 287 GNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334
+ + +A++ + + P+ A YH+ S
Sbjct: 178 ------------LGSPTSARDLADALLALIRKRLRGPALAGTYHLAGS 213
|
L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284 |
| >gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 1e-04
Identities = 40/175 (22%), Positives = 65/175 (37%), Gaps = 44/175 (25%)
Query: 10 LENKTILVSGVTG----FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAK 65
L K LV+G + +A+ + RV V A R E A+
Sbjct: 3 LSGKVALVTGASSGIGRAIARALAREGARV----------V-------VAARRSEEEAAE 45
Query: 66 DVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNE---LDIMVNSAA 122
+ +KE G + V D+S ++ ++ L E +DI+VN+A
Sbjct: 46 ALAAAIKEAGG--------GRAAAVAADVSDDEESVEA--LVAAAEEEFGRIDILVNNAG 95
Query: 123 ITKF--------DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169
I +E +D +N LG L A +K + V++S+ VAG
Sbjct: 96 IAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISS--VAGLG 148
|
Length = 251 |
| >gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 2e-04
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 39/163 (23%)
Query: 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLK 72
ILV+G GF+ F+ +L P+ K + N+ K
Sbjct: 1 MKILVTGGAGFIGSNFVRYLLNKYPDYK--------------------------IINLDK 34
Query: 73 EKWGTRLNSF----ISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDE 128
+ L + S + FV GDI +L + L EE ++D +++ AA + D
Sbjct: 35 LTYAGNLENLEDVSSSPRYRFVKGDICDAELVDR---LFEE--EKIDAVIHFAAESHVDR 89
Query: 129 RYDVAFG---INTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168
N LG L+ A+K +K FVH+ST V G+
Sbjct: 90 SISDPEPFIRTNVLGTYTLLEAARKY-GVKRFVHISTDEVYGD 131
|
This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315 |
| >gnl|CDD|200085 TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 4e-04
Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 10/72 (13%)
Query: 115 DIMVNSAAITKFD--ERY-DVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV-AGERT 170
D +VN+AA T D E + AF +N L +L A + VH+ST YV GE
Sbjct: 52 DAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG--ARLVHISTDYVFDGEGK 109
Query: 171 GLILE----NPL 178
E NPL
Sbjct: 110 RPYREDDATNPL 121
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 287 |
| >gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.002
Identities = 40/157 (25%), Positives = 60/157 (38%), Gaps = 30/157 (19%)
Query: 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKE 73
ILV+G GF+ F+ IL P+ + + L D + A +N L +
Sbjct: 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVL-----DKLTYAGNLEN----------LAD 45
Query: 74 KWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYD-- 131
+ + FV GDI D L E ++ D +V+ AA + D
Sbjct: 46 LED-------NPRYRFVKGDIG--DRELVSRLFTE---HQPDAVVHFAAESHVDRSISGP 93
Query: 132 VAF-GINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167
AF N +G L+ +K F H+ST V G
Sbjct: 94 AAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYG 130
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317 |
| >gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.002
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 115 DIMVNSAAITKFDER---YDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165
D+++N AA T+ D+ ++A+ +N L +L AK+ +H+ST YV
Sbjct: 57 DVIINCAAYTRVDKCESDPELAYRVNVLAPENLARAAKEVGAR--LIHISTDYV 108
|
dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 570 | |||
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 100.0 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 100.0 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 100.0 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 100.0 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.98 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.98 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.97 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.97 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.97 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.97 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.97 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.97 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.96 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.96 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.96 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.96 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.96 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.96 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.96 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.96 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.96 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.96 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.96 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.96 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.96 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.96 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.95 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.95 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.95 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.95 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.95 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.95 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.95 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.95 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.95 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.95 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.95 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.95 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.94 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.94 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.94 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.94 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.94 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.94 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.93 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.93 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.93 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.93 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.93 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.93 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.92 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.92 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.92 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.91 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.91 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.91 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.9 | |
| PF03015 | 94 | Sterile: Male sterility protein; InterPro: IPR0042 | 99.9 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.9 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.86 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.85 | |
| cd09071 | 92 | FAR_C C-terminal domain of fatty acyl CoA reductas | 99.84 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.82 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.82 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.82 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.81 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.8 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.79 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.78 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.76 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.75 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.75 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.74 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.73 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.73 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.72 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.72 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.72 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.7 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.69 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.69 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.69 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.69 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.68 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.68 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.68 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.67 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.67 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.67 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.67 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.67 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.67 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.65 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.65 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.65 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.64 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.64 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.64 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.62 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.62 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.62 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.61 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.61 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.6 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.6 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.6 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.6 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.59 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.59 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.58 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.58 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.57 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.57 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.57 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.57 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.56 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.56 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.56 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.56 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.55 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.55 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.55 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.55 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.54 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.54 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.54 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.54 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.54 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.54 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.53 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.53 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.53 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.53 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.53 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.52 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.5 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.5 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.5 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.49 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.48 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.48 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.48 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.47 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.47 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.47 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.46 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.46 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.46 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.46 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.46 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.46 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.45 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.43 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.42 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.42 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.41 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.41 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.4 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.4 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.39 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.39 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.39 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.39 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.39 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.38 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.38 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.38 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.38 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.38 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.38 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.38 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.38 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.38 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.38 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.37 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.37 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.36 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.36 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.36 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.35 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.35 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.35 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.35 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.35 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 99.34 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.33 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.32 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.32 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.32 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.3 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.29 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.29 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.29 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.29 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.28 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.27 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.24 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.22 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.22 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.2 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.19 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 99.19 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.18 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.17 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 99.15 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.11 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 99.08 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.08 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.05 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 99.02 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 99.02 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 98.98 | |
| PLN00015 | 308 | protochlorophyllide reductase | 98.97 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 98.95 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 98.88 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 98.87 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 98.86 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 98.83 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 98.82 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 98.72 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 98.7 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 98.69 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 98.67 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 98.67 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.67 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 98.62 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 98.58 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 98.52 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 98.49 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 98.3 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 98.14 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.12 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.11 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 98.1 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 98.1 | |
| PLN00106 | 323 | malate dehydrogenase | 98.08 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 98.02 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 97.88 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 97.79 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 97.67 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 97.64 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 97.58 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 97.4 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 97.4 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 97.25 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 97.24 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 97.16 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 97.13 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 97.11 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 96.98 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 96.95 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 96.9 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 96.83 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 96.82 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 96.76 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 96.7 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 96.68 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 96.35 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 96.34 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 96.25 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 96.14 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 96.13 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 96.1 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 96.08 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 96.03 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 95.86 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 95.75 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 95.65 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 95.61 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.54 | |
| PRK08223 | 287 | hypothetical protein; Validated | 95.52 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 95.51 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 95.31 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 95.29 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 95.28 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 95.25 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 95.24 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 95.04 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 95.0 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 94.9 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 94.74 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 94.69 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 94.68 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 94.63 | |
| PRK07411 | 390 | hypothetical protein; Validated | 94.6 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 94.5 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 94.48 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 94.47 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 94.42 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 94.34 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 94.29 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 94.26 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 94.26 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 94.16 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 94.14 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 94.12 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 93.86 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 93.77 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 93.73 | |
| cd01491 | 286 | Ube1_repeat1 Ubiquitin activating enzyme (E1), rep | 93.68 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 93.57 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 93.55 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 93.42 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 93.41 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 93.34 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 93.32 | |
| COG0136 | 334 | Asd Aspartate-semialdehyde dehydrogenase [Amino ac | 93.28 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 93.07 | |
| PTZ00374 | 1108 | dihydroxyacetone phosphate acyltransferase; Provis | 93.01 | |
| PLN02602 | 350 | lactate dehydrogenase | 92.8 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 92.7 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 92.51 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 92.44 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 92.39 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 92.27 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 92.26 | |
| PRK14851 | 679 | hypothetical protein; Provisional | 92.11 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 92.05 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 91.85 | |
| KOG1494 | 345 | consensus NAD-dependent malate dehydrogenase [Ener | 91.56 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 91.41 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 91.3 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 91.28 | |
| PRK14852 | 989 | hypothetical protein; Provisional | 91.22 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 91.16 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 91.11 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 90.69 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 90.61 | |
| PRK06153 | 393 | hypothetical protein; Provisional | 90.55 | |
| TIGR01408 | 1008 | Ube1 ubiquitin-activating enzyme E1. This model re | 90.45 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 90.44 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 90.29 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 90.29 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 90.23 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 90.01 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 89.61 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 89.46 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 89.26 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 89.14 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 89.02 | |
| TIGR01745 | 366 | asd_gamma aspartate-semialdehyde dehydrogenase, ga | 88.8 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 88.64 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 88.57 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 88.51 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 88.48 | |
| TIGR01381 | 664 | E1_like_apg7 E1-like protein-activating enzyme Gsa | 88.37 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 88.03 | |
| cd01486 | 307 | Apg7 Apg7 is an E1-like protein, that activates tw | 87.66 | |
| cd01493 | 425 | APPBP1_RUB Ubiquitin activating enzyme (E1) subuni | 87.63 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 87.55 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 87.37 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 87.35 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 87.35 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 87.27 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 87.12 | |
| PRK01710 | 458 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 86.99 | |
| TIGR01771 | 299 | L-LDH-NAD L-lactate dehydrogenase. This model repr | 86.81 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 86.39 | |
| TIGR01763 | 305 | MalateDH_bact malate dehydrogenase, NAD-dependent. | 86.26 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 86.13 | |
| PF02670 | 129 | DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re | 85.99 | |
| PRK06598 | 369 | aspartate-semialdehyde dehydrogenase; Reviewed | 85.93 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 85.64 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 85.6 | |
| PRK06901 | 322 | aspartate-semialdehyde dehydrogenase; Provisional | 85.54 | |
| TIGR01851 | 310 | argC_other N-acetyl-gamma-glutamyl-phosphate reduc | 85.52 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 85.45 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 84.84 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 84.79 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 84.77 | |
| KOG1496 | 332 | consensus Malate dehydrogenase [Energy production | 84.37 | |
| cd01488 | 291 | Uba3_RUB Ubiquitin activating enzyme (E1) subunit | 84.34 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 84.3 | |
| cd01339 | 300 | LDH-like_MDH L-lactate dehydrogenase-like malate d | 84.24 | |
| PRK14189 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 84.09 | |
| COG0289 | 266 | DapB Dihydrodipicolinate reductase [Amino acid tra | 83.69 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 83.59 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 83.39 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 83.29 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 83.2 | |
| PRK10792 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 83.07 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 82.92 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 82.35 | |
| PRK04308 | 445 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 81.56 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 81.49 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 81.44 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 81.34 | |
| TIGR03693 | 637 | ocin_ThiF_like putative thiazole-containing bacter | 81.29 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 81.23 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 81.15 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 81.09 | |
| PRK14179 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 80.95 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 80.82 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 80.65 | |
| KOG2013 | 603 | consensus SMT3/SUMO-activating complex, catalytic | 80.32 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 80.26 | |
| PRK14176 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 80.07 |
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-98 Score=779.11 Aligned_cols=458 Identities=39% Similarity=0.638 Sum_probs=425.7
Q ss_pred CCcccHHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccc
Q 008324 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLN 80 (570)
Q Consensus 1 ~~~~~i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~ 80 (570)
|+.++|++||+||+|||||||||+||+|+||||+++|+|++||+|+|+++++++.+|++ +...+++|+++++.+|..
T Consensus 1 ~~~~~i~~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~-~~~~~~lF~~l~~~~p~~-- 77 (467)
T KOG1221|consen 1 MEISDIVQFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLR-TELKDPLFEVLKEKKPEA-- 77 (467)
T ss_pred CCcccHHHHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHH-HHHhhhHHHHHHhhCccc--
Confidence 45667999999999999999999999999999999999999999999999999999999 455669999999999873
Q ss_pred cccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEE
Q 008324 81 SFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 81 ~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~v 160 (570)
.+|+.+|.||+++++||+|+.|.. .+.++||+|||+||+++|+++++.++.+|+.||++++++|++|++++.|+||
T Consensus 78 ---l~Kv~pi~GDi~~~~LGis~~D~~-~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhV 153 (467)
T KOG1221|consen 78 ---LEKVVPIAGDISEPDLGISESDLR-TLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHV 153 (467)
T ss_pred ---eecceeccccccCcccCCChHHHH-HHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEe
Confidence 599999999999999999999986 8999999999999999999999999999999999999999999999999999
Q ss_pred ecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHH
Q 008324 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (570)
Q Consensus 161 STa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~ 240 (570)
||||+++.. +.++|++|++....+++..+++. ++++++.+++ .++++.++|||||++||++||+
T Consensus 154 STAy~n~~~-~~i~E~~y~~~~~~~~~~~i~~~---------~~~~~~~ld~------~~~~l~~~~PNTYtfTKal~E~ 217 (467)
T KOG1221|consen 154 STAYSNCNV-GHIEEKPYPMPETCNPEKILKLD---------ENLSDELLDQ------KAPKLLGGWPNTYTFTKALAEM 217 (467)
T ss_pred ehhheeccc-ccccccccCccccCCHHHHHhhh---------ccchHHHHHH------hhHHhcCCCCCceeehHhhHHH
Confidence 999999655 59999999976667888776555 5677777777 4555677999999999999999
Q ss_pred HHHHhccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhh
Q 008324 241 LMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHA 320 (570)
Q Consensus 241 lv~~~~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~ 320 (570)
++.++..++|++|+|||+|.+++.||+|||++|.+|+.+++.++++|.++.+.+|++..+|+||||+|||++++++|.++
T Consensus 218 ~i~~~~~~lPivIiRPsiI~st~~EP~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~ 297 (467)
T KOG1221|consen 218 VIQKEAENLPLVIIRPSIITSTYKEPFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHA 297 (467)
T ss_pred HHHhhccCCCeEEEcCCceeccccCCCCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCC--CCceEEecCCCCCcccHHHHHHHHhhhcccCCCCCCCCCeEEecceeeechhHHHHHHHHHHHHhhHHHHHHHH
Q 008324 321 KQPS--DANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQVAN 398 (570)
Q Consensus 321 ~~~~--~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~lPa~~lD~~~ 398 (570)
.... ...|||++++..||++|+++.+...+++.+.|+. +.+|+|...++++.+.|..+.++.|.+||+++|+++
T Consensus 298 ~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~~~~Pl~----~~iw~P~~~~~sn~~~f~~~~~~~h~lPa~~~d~~~ 373 (467)
T KOG1221|consen 298 GNSKEKTPPIYHLTSSNDNPVTWGDFIELALRYFEKIPLE----KMIWYPFGTLTSNPWLFNLAAFLYHTLPAYILDLLL 373 (467)
T ss_pred ccCCCCCCcEEEecccccCcccHHHHHHHHHHhcccCCcc----cceeccCceeeecHhHHHHHHHHHHHhhHHHHHHHH
Confidence 5433 3779999999999999999999999999999998 779999999999999999999999999999999999
Q ss_pred HhhcccchhhHHHHHHHHHHHHHHHHcccccccceEEEechhHHHHHHHhcCCCCCCcccccCCCCCCHHHHHhhcChhh
Q 008324 399 TVFHNFFKGVYNDLRKKVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYFMNTHIPG 478 (570)
Q Consensus 399 ~~~g~~~~~~~~kl~rk~~~~~~~~~~~~~Ft~~~w~F~~~n~~~L~~~ls~~D~~r~~F~fD~~~idW~~Y~~~~~i~G 478 (570)
++.|++ |++.++++ ++++.+++++||+.++|.||++|+++|+..|+++| +++|+||++++||++|+.+ |++|
T Consensus 374 ~i~g~k--~~~~k~~~---ki~~~~~~l~~f~~~~w~Fd~~n~~~L~~~~~~~d--~~~f~fd~~~ldW~ey~~~-~i~G 445 (467)
T KOG1221|consen 374 RLLGKK--PRLVKLYR---KIHKLVKLLEPFSLFKWIFDNKNTEKLREKMSEED--KRLFNFDMKQLDWEEYFNR-HLLG 445 (467)
T ss_pred HHhCCC--hhhhHHHH---HHHHHHHhhhhheeceEEecCccHHHHHHhCCHHH--HhhcCCCcccCCHHHHHHH-HHHH
Confidence 999875 88777754 56788899999999999999999999999999999 7899999999999999998 5999
Q ss_pred HHHHhcCCC--Ccchhh
Q 008324 479 VEKLLQQKR--SFPKTK 493 (570)
Q Consensus 479 irkyllKe~--~~~~ar 493 (570)
+|+|++||+ ++|.||
T Consensus 446 ~r~~llKe~~e~l~~~r 462 (467)
T KOG1221|consen 446 LRKYLLKESPESLPQAR 462 (467)
T ss_pred HHHHHhcCChhhhHHHH
Confidence 999999999 899999
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-86 Score=721.49 Aligned_cols=484 Identities=60% Similarity=1.028 Sum_probs=442.9
Q ss_pred CcccHHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhcccccc
Q 008324 2 ELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNS 81 (570)
Q Consensus 2 ~~~~i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~ 81 (570)
+.++|.+||+||+|||||||||||++|+++||+++++|++||+|+|++++.++.+|+..++.+.++|+++++..|..+.+
T Consensus 1 ~~~~i~~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~ 80 (491)
T PLN02996 1 EEGSCVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNS 80 (491)
T ss_pred CcccHHHHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhh
Confidence 45689999999999999999999999999999999999999999999999999999988899999999999988876655
Q ss_pred ccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEe
Q 008324 82 FISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (570)
Q Consensus 82 ~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vS 161 (570)
+..++++++.||+++|+|||++.+..+.+.+++|+|||+||.++++++++.+.++|+.||.+++++|++++++++|||+|
T Consensus 81 ~~~~kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vS 160 (491)
T PLN02996 81 LISEKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVS 160 (491)
T ss_pred hhhcCEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEe
Confidence 55689999999999999999998866678889999999999999998899999999999999999999987899999999
Q ss_pred cceeecCCCcccccccCCCCC------CCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHH
Q 008324 162 TAYVAGERTGLILENPLDGAS------GLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (570)
Q Consensus 162 Ta~v~~~~~g~i~E~~~~~~~------~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
|++|+|...+.++|++|++.. +.|++++...+++.+.++....++++.++..|+++|++++.+.+|||+|++||
T Consensus 161 T~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK 240 (491)
T PLN02996 161 TAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTK 240 (491)
T ss_pred eeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhH
Confidence 999999887889999987322 34788887777766777776778999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHH
Q 008324 236 TMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (570)
Q Consensus 236 ~~aE~lv~~~~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a 315 (570)
++||+++.++..++|++|+||++|+|++++|+|||+++++++.+++.++++|.++.+++++++.+|+|||||||++++++
T Consensus 241 ~~aE~lv~~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a 320 (491)
T PLN02996 241 AMGEMLLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVA 320 (491)
T ss_pred HHHHHHHHHhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHH
Confidence 99999999887799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccCCCCCCCCCeEEecceeeechhHHHHHHHHHHHHhhHHHHH
Q 008324 316 MVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKGLQ 395 (570)
Q Consensus 316 ~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~lPa~~lD 395 (570)
++........++|||++++..+|+||.++++.+.+++++.|+...+|+.+|+|.+.++.+.+.|+.+..+.|.+|++++|
T Consensus 321 ~~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~lp~~~~~ 400 (491)
T PLN02996 321 MAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNPWINKEGSPVKVGKGTILSTMASFSLYMTIRYLLPLKALQ 400 (491)
T ss_pred HHHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCCCcCCCCCeEeeCCceecCcHHHHHHHHHHHHHhHHHHHH
Confidence 98542122236799999998899999999999999999999988888999999999999999999989999999999999
Q ss_pred HHHHhhcccchhhHHHHHHHHHHHHHHHHcccccccceEEEechhHHHHHHHhcCCC-CCCcccccCCCCCCHHHHHhhc
Q 008324 396 VANTVFHNFFKGVYNDLRKKVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSR-TETDLFYFDPDSIEWSDYFMNT 474 (570)
Q Consensus 396 ~~~~~~g~~~~~~~~kl~rk~~~~~~~~~~~~~Ft~~~w~F~~~n~~~L~~~ls~~D-~~r~~F~fD~~~idW~~Y~~~~ 474 (570)
++..+++.+.+|++.++++++..+++++++|+||++++|.|+|+|+++|++.|+++| .|+++|+||++.+||++|++++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~w~f~~~n~~~l~~~~~~~d~~d~~~f~~d~~~~~w~~y~~~~ 480 (491)
T PLN02996 401 LVNIILPKRYGDKYTDLNRKIKLVMRLVDLYKPYVFFKGIFDDTNTEKLRIKRKETGKEEADMFDFDPKSIDWEDYMTNV 480 (491)
T ss_pred HHHHHhhhccChHHHHHHHHHHHHHHHHHHhhccccceEEEccHHHHHHHHHCCccccccccEeccCcccCCHHHHHHHh
Confidence 988855544579999999999888999999999999999999999999999999977 6688999999999999999996
Q ss_pred ChhhHHHHhcC
Q 008324 475 HIPGVEKLLQQ 485 (570)
Q Consensus 475 ~i~GirkyllK 485 (570)
|++|+|||++|
T Consensus 481 ~~~g~~~y~~k 491 (491)
T PLN02996 481 HIPGLVKYVLK 491 (491)
T ss_pred hHHHHHHHhcC
Confidence 79999999997
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-83 Score=701.83 Aligned_cols=467 Identities=39% Similarity=0.689 Sum_probs=402.6
Q ss_pred cHHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccC
Q 008324 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 5 ~i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
.|++||+||+|||||||||||++|+++|++.+|+|++||+|+|++++.++.+|+.+++++.++|++|++++|..+.++..
T Consensus 112 ~I~~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~ 191 (605)
T PLN02503 112 GIAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFML 191 (605)
T ss_pred chhhhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCcccccccc
Confidence 58999999999999999999999999999999999999999999999999999988899999999999999877777777
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecce
Q 008324 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~ 164 (570)
+|++++.||+++++|||++++. +.+.+++|+|||+||.++|+++++.++++|+.||.+++++|++++++++|||+||+|
T Consensus 192 ~Ki~~v~GDl~d~~LGLs~~~~-~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTay 270 (605)
T PLN02503 192 SKLVPVVGNVCESNLGLEPDLA-DEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAY 270 (605)
T ss_pred ccEEEEEeeCCCcccCCCHHHH-HHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCce
Confidence 9999999999999999988775 477788999999999999999999999999999999999999987889999999999
Q ss_pred eecCCCcccccccCCCC-----------------CCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCC
Q 008324 165 VAGERTGLILENPLDGA-----------------SGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (570)
Q Consensus 165 v~~~~~g~i~E~~~~~~-----------------~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 227 (570)
|||.+.|.++|++|+.. +++|++++++++.+.... ..+++++.+.|+++|++|+++++|
T Consensus 271 VyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~----~~~~~~~~~~l~~~g~~~~~~~~~ 346 (605)
T PLN02503 271 VNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRH----GFQSNSFAQKMKDLGLERAKLYGW 346 (605)
T ss_pred eecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhc----ccchHHHHHHhhhcccchhhhCCC
Confidence 99999889999999622 456888888776332221 224556677789999999999999
Q ss_pred CchHHHHHHHHHHHHHHhccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 228 PNTYVFTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 228 ~n~Y~~sK~~aE~lv~~~~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
||+|++||++||+++.++..++|++|+||++|.++++||+|||++|.+...+++..+++|.++.++++++...|+||||+
T Consensus 347 pNtYt~TK~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~ 426 (605)
T PLN02503 347 QDTYVFTKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADM 426 (605)
T ss_pred CChHHHHHHHHHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecH
Confidence 99999999999999998888999999999999999999999999996666666677789999999999999999999999
Q ss_pred HHHHHHHHHHHhhCC-CCCCceEEecCCCCCcccHHHHHHHHhhhcccCCCCCCCCCeEEecceeeechhHHHHHHHHHH
Q 008324 308 VVNAMIVAMVAHAKQ-PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWINKQGKPVKVSKIILFSSIASFHGYMQIR 386 (570)
Q Consensus 308 va~aii~a~~~~~~~-~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 386 (570)
|||++++|++..... ...++||||+++..||++|+++++.+.+++.+.|+....|.+++++...+..+... ++.
T Consensus 427 vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~-----~~~ 501 (605)
T PLN02503 427 VVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKSSPYMDSKGRPIHVPPMKLFSSMED-----FSS 501 (605)
T ss_pred HHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhhCCcccccCcceeccCceehhhHHH-----HHH
Confidence 999999996543322 22478999999999999999999999999999999866666666665555543332 223
Q ss_pred HHhhHHHHHHHHHhh--ccc-chhhHHHHHH-----HHHHHHHHHHcccccccceEEEechhHHHHHHHhcCCCCCCccc
Q 008324 387 YLLPLKGLQVANTVF--HNF-FKGVYNDLRK-----KVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLF 458 (570)
Q Consensus 387 ~~lPa~~lD~~~~~~--g~~-~~~~~~kl~r-----k~~~~~~~~~~~~~Ft~~~w~F~~~n~~~L~~~ls~~D~~r~~F 458 (570)
|. +.|+++++. |.+ .++++.+.++ .++++.+++++|+||++++|.|+|+|+++|++.|+++| |++|
T Consensus 502 h~----~~d~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ft~~~w~F~~~n~~~L~~~ms~~D--r~~F 575 (605)
T PLN02503 502 HL----WRDALLRSGLAGMSSSDRKLSQKLENICAKSVEQAKYLASIYEPYTFYGGRFDNSNTQRLMERMSEEE--KAEF 575 (605)
T ss_pred HH----HHHHHHHHhhhcccccChHHHHHHHHHHHHHHHHHHHHHHHHhhheeCeEEEechHHHHHHHhCCHHH--hhcc
Confidence 32 567666653 311 2455555553 35577889999999999999999999999999999999 7899
Q ss_pred ccCCCCCCHHHHHhhcChhhHHHHhcCCC
Q 008324 459 YFDPDSIEWSDYFMNTHIPGVEKLLQQKR 487 (570)
Q Consensus 459 ~fD~~~idW~~Y~~~~~i~GirkyllKe~ 487 (570)
+||++.|||++||++.|++|+|||++|++
T Consensus 576 ~~D~~~idW~~Y~~~~~i~G~rky~lk~~ 604 (605)
T PLN02503 576 GFDVGSIDWRDYITNVHIPGLRRHVMKGR 604 (605)
T ss_pred CCCcCCCCHHHHHHHhhhhHHHHHHhccC
Confidence 99999999999999857999999999986
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=331.03 Aligned_cols=246 Identities=32% Similarity=0.524 Sum_probs=171.1
Q ss_pred EECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccCCC
Q 008324 17 VSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISS 96 (570)
Q Consensus 17 ITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl~~ 96 (570)
|||||||||++|+++|++.++.+ +||+|+|+++...+.+|+.+.+.+..+++...++. .++|+++.||+++
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~-~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~--------~~ri~~v~GDl~~ 71 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDV-KIYCLVRASSSQSALERLKDALKEYGLWDDLDKEA--------LSRIEVVEGDLSQ 71 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TT-EEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHH--------TTTEEEEE--TTS
T ss_pred CcCCCcHHHHHHHHHHHcCCCCc-EEEEEEeCcccccchhhhhhhcccccchhhhhhhh--------hccEEEEeccccc
Confidence 79999999999999999998766 99999999999999999987777777776664321 4899999999999
Q ss_pred CCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCCcccccc
Q 008324 97 EDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILEN 176 (570)
Q Consensus 97 ~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~g~i~E~ 176 (570)
|+|||++++. +.+.+++|+||||||.++|..+++.+.++||.||++++++|.+. +.++|+|+||+++.+...+.+.|+
T Consensus 72 ~~lGL~~~~~-~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~-~~~~~~~iSTa~v~~~~~~~~~~~ 149 (249)
T PF07993_consen 72 PNLGLSDEDY-QELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQG-KRKRFHYISTAYVAGSRPGTIEEK 149 (249)
T ss_dssp GGGG--HHHH-HHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSS-S---EEEEEEGGGTTS-TTT--SS
T ss_pred cccCCChHHh-hccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhc-cCcceEEeccccccCCCCCccccc
Confidence 9999998886 48889999999999999999999999999999999999999986 445999999999988877666555
Q ss_pred cCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhc--cCCcEEEE
Q 008324 177 PLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSK--ENLSLVII 254 (570)
Q Consensus 177 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~--~~lp~~Iv 254 (570)
.+++.. ........++|+|..||++||+++.++. .++|++|+
T Consensus 150 ~~~~~~------------------------------------~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~ 193 (249)
T PF07993_consen 150 VYPEEE------------------------------------DDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIY 193 (249)
T ss_dssp S-HHH--------------------------------------EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEE
T ss_pred cccccc------------------------------------ccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 442000 0011123678999999999999999883 48999999
Q ss_pred ecCceecCCCCCCCccccCcc-chHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHH
Q 008324 255 RPTVVSGTYKEPFPGWVEDLK-TINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (570)
Q Consensus 255 RPsiV~g~~~ep~~gw~~~~~-~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ai 312 (570)
|||.|+| +|.+||.+... .+..+...+..|..+.++++++...|+||||+||++|
T Consensus 194 Rp~~i~g---~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 194 RPGIIVG---DSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLDLVPVDYVARAI 249 (249)
T ss_dssp EE-EEE----SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--EEEHHHHHHHH
T ss_pred ecCcccc---cCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEeEECHHHHHhhC
Confidence 9999999 46688988877 5666667778888888888888889999999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=279.21 Aligned_cols=254 Identities=19% Similarity=0.251 Sum_probs=194.3
Q ss_pred EEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccCC
Q 008324 16 LVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDIS 95 (570)
Q Consensus 16 lITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl~ 95 (570)
||||||||||++|+++|++.|+ +.+|.++.|........ .+. ..+...++.||++
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~-~~~Vr~~d~~~~~~~~~-~~~-----------------------~~~~~~~~~~Di~ 55 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGY-IYEVRVLDRSPPPKFLK-DLQ-----------------------KSGVKEYIQGDIT 55 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCC-ceEEEEcccccccccch-hhh-----------------------cccceeEEEeccc
Confidence 6999999999999999999985 67888888776543211 000 0133449999999
Q ss_pred CCCCCCCchhhHHHHhCCccEEEEcCccCCcc--ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCC---C
Q 008324 96 SEDLGLKDSNLKEELWNELDIMVNSAAITKFD--ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER---T 170 (570)
Q Consensus 96 ~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~--~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~---~ 170 (570)
+.+.+..+++++|+|||+||.+... .+.+..+++||.||++++++|++. ++++|||+||+.+.+.. .
T Consensus 56 -------d~~~l~~a~~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~-~VkrlVytSS~~vv~~~~~~~ 127 (280)
T PF01073_consen 56 -------DPESLEEALEGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKA-GVKRLVYTSSISVVFDNYKGD 127 (280)
T ss_pred -------cHHHHHHHhcCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcCcceeEeccCCC
Confidence 5566678999999999999987654 467788999999999999999997 99999999999998762 1
Q ss_pred ccc--ccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhc--
Q 008324 171 GLI--LENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSK-- 246 (570)
Q Consensus 171 g~i--~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~-- 246 (570)
..+ +|. .+.+ ..+.+.|+.||++||+++.+..
T Consensus 128 ~~~~~dE~-----~~~~---------------------------------------~~~~~~Y~~SK~~AE~~V~~a~~~ 163 (280)
T PF01073_consen 128 PIINGDED-----TPYP---------------------------------------SSPLDPYAESKALAEKAVLEANGS 163 (280)
T ss_pred CcccCCcC-----Cccc---------------------------------------ccccCchHHHHHHHHHHHHhhccc
Confidence 111 111 1100 1356789999999999999873
Q ss_pred -----cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhC
Q 008324 247 -----ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAK 321 (570)
Q Consensus 247 -----~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~ 321 (570)
..+.++++||+.|||+.... ....++..+..|......++++...|+++|++||.|++.|+.....
T Consensus 164 ~~~~g~~l~t~~lRP~~IyGp~d~~---------~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~ 234 (280)
T PF01073_consen 164 ELKNGGRLRTCALRPAGIYGPGDQR---------LVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLE 234 (280)
T ss_pred ccccccceeEEEEeccEEeCccccc---------ccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhcc
Confidence 24999999999999987631 1112333445565667788888999999999999999998864322
Q ss_pred ----CCCCCceEEecCCCCCccc-HHHHHHHHhhhcccCCC
Q 008324 322 ----QPSDANIYHVGSSLRNPVT-LVSILDYGFVYFTKKPW 357 (570)
Q Consensus 322 ----~~~~~~iyni~s~~~~pit-~~~l~~~i~~~~~~~p~ 357 (570)
....|++|+|+++ .|+. +.++...+.+.+|..+.
T Consensus 235 ~~~~~~~~G~~y~itd~--~p~~~~~~f~~~~~~~~G~~~~ 273 (280)
T PF01073_consen 235 PGKPERVAGQAYFITDG--EPVPSFWDFMRPLWEALGYPPP 273 (280)
T ss_pred ccccccCCCcEEEEECC--CccCcHHHHHHHHHHHCCCCCC
Confidence 2235899999999 8999 99999999999987654
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-31 Score=277.77 Aligned_cols=266 Identities=15% Similarity=0.193 Sum_probs=194.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.++|+|||||||||||++|+++|++.+ .+|+++.|...+... .+. + +....+. ....++.+
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g---~~V~~~d~~~~~~~~--~~~-~---------~~~~~~~----~~~~~~~~ 73 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLN---QTVIGLDNFSTGYQH--NLD-D---------VRTSVSE----EQWSRFIF 73 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCC---CEEEEEeCCCCcchh--hhh-h---------hhhcccc----ccCCceEE
Confidence 567999999999999999999999988 577888886543211 111 0 0000000 01246889
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceee
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f---~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~ 166 (570)
+.||+. +.+.+..+++++|+|||+||.... .+......++|+.||.+++++|++. ++++|||+||+.+|
T Consensus 74 ~~~Di~-------d~~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~v~~SS~~vy 145 (348)
T PRK15181 74 IQGDIR-------KFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA-HVSSFTYAASSSTY 145 (348)
T ss_pred EEccCC-------CHHHHHHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeechHhh
Confidence 999999 444455778899999999997542 2344567899999999999999997 89999999999999
Q ss_pred cCCCc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008324 167 GERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (570)
Q Consensus 167 ~~~~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (570)
|...+ ...|+ .+ ..+.+.|+.||..+|.++..+
T Consensus 146 g~~~~~~~~e~-----~~-----------------------------------------~~p~~~Y~~sK~~~e~~~~~~ 179 (348)
T PRK15181 146 GDHPDLPKIEE-----RI-----------------------------------------GRPLSPYAVTKYVNELYADVF 179 (348)
T ss_pred CCCCCCCCCCC-----CC-----------------------------------------CCCCChhhHHHHHHHHHHHHH
Confidence 86321 11111 11 133468999999999999876
Q ss_pred --ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCC
Q 008324 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQP 323 (570)
Q Consensus 246 --~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~ 323 (570)
..+++++++||+.|||+...|-... . ..+..++..+..|....+++++++.+|+|||||+|++++.++..... .
T Consensus 180 ~~~~~~~~~~lR~~~vyGp~~~~~~~~-~--~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~-~ 255 (348)
T PRK15181 180 ARSYEFNAIGLRYFNVFGRRQNPNGAY-S--AVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDL-A 255 (348)
T ss_pred HHHhCCCEEEEEecceeCcCCCCCCcc-c--cCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccc-c
Confidence 4589999999999999876432111 0 12344555666676667789999999999999999999887642211 1
Q ss_pred CCCceEEecCCCCCcccHHHHHHHHhhhccc
Q 008324 324 SDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 324 ~~~~iyni~s~~~~pit~~~l~~~i~~~~~~ 354 (570)
..+++||++++ +++|+.|+++.+.+.++.
T Consensus 256 ~~~~~yni~~g--~~~s~~e~~~~i~~~~~~ 284 (348)
T PRK15181 256 SKNKVYNVAVG--DRTSLNELYYLIRDGLNL 284 (348)
T ss_pred CCCCEEEecCC--CcEeHHHHHHHHHHHhCc
Confidence 13679999998 899999999999988763
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-31 Score=259.33 Aligned_cols=259 Identities=22% Similarity=0.280 Sum_probs=205.9
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC-CcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA-DIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~-~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
|++|||||.||||+..++.+++..|+ .+|.++..-. .+. .+-+. ++. ..++..+++
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d-~~v~~~DkLTYAgn--~~~l~-~~~-------------------~~~~~~fv~ 57 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPD-DHVVNLDKLTYAGN--LENLA-DVE-------------------DSPRYRFVQ 57 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCC-ceEEEEecccccCC--HHHHH-hhh-------------------cCCCceEEe
Confidence 58999999999999999999999987 4566665422 111 11111 111 136889999
Q ss_pred ccCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceee
Q 008324 92 GDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~ 166 (570)
||+. |.+....+++ ++|+|+|+||-.+-| ..+...+++|+.||.+||+++++.-...+|+||||.-||
T Consensus 58 ~DI~-------D~~~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVY 130 (340)
T COG1088 58 GDIC-------DRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVY 130 (340)
T ss_pred cccc-------CHHHHHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEecccccc
Confidence 9999 6666667777 599999999988765 345677999999999999999997333589999999999
Q ss_pred cCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-
Q 008324 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (570)
Q Consensus 167 ~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~- 245 (570)
|+... ++..++|.+++ .+.++|++||+.++.+++.+
T Consensus 131 G~l~~--~~~~FtE~tp~-----------------------------------------~PsSPYSASKAasD~lVray~ 167 (340)
T COG1088 131 GDLGL--DDDAFTETTPY-----------------------------------------NPSSPYSASKAASDLLVRAYV 167 (340)
T ss_pred ccccC--CCCCcccCCCC-----------------------------------------CCCCCcchhhhhHHHHHHHHH
Confidence 97531 22234444443 45688999999999999998
Q ss_pred -ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCC
Q 008324 246 -KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (570)
Q Consensus 246 -~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 324 (570)
..++|++|.|+|+-|||.+.|- ..+..++..+..|+...++|++.+++||++|+|-|+|+-..+.. ..
T Consensus 168 ~TYglp~~ItrcSNNYGPyqfpE-------KlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~k--g~-- 236 (340)
T COG1088 168 RTYGLPATITRCSNNYGPYQFPE-------KLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTK--GK-- 236 (340)
T ss_pred HHcCCceEEecCCCCcCCCcCch-------hhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhc--Cc--
Confidence 5699999999999999999651 44456678889999999999999999999999999999988852 22
Q ss_pred CCceEEecCCCCCcccHHHHHHHHhhhcccCCC
Q 008324 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTKKPW 357 (570)
Q Consensus 325 ~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p~ 357 (570)
.|++||++++ +..+..++++.+.+.+++...
T Consensus 237 ~GE~YNIgg~--~E~~Nlevv~~i~~~l~~~~~ 267 (340)
T COG1088 237 IGETYNIGGG--NERTNLEVVKTICELLGKDKP 267 (340)
T ss_pred CCceEEeCCC--ccchHHHHHHHHHHHhCcccc
Confidence 2789999999 889999999999999998644
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.3e-30 Score=259.68 Aligned_cols=268 Identities=19% Similarity=0.187 Sum_probs=204.7
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+++|+|||||||||++|++.||.+| +.|...+|+..+....+.+.+ + . ...+++..+
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rG---Y~V~gtVR~~~~~k~~~~L~~-l------------~------~a~~~l~l~ 62 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRG---YTVRGTVRDPEDEKKTEHLRK-L------------E------GAKERLKLF 62 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCC---CEEEEEEcCcchhhhHHHHHh-c------------c------cCcccceEE
Confidence 67899999999999999999999999 778999999876544333331 1 0 113678999
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcccc--HHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecC
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDER--YDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~--~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~ 168 (570)
.+|++ +.+.....++++|.|||+|..+.|+.. ..+.++.++.||.|+|++|++.+.++|+|++||..+...
T Consensus 63 ~aDL~-------d~~sf~~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~ 135 (327)
T KOG1502|consen 63 KADLL-------DEGSFDKAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRY 135 (327)
T ss_pred ecccc-------ccchHHHHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhcc
Confidence 99999 556667889999999999999988643 557899999999999999999977999999999766543
Q ss_pred C-CcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--
Q 008324 169 R-TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (570)
Q Consensus 169 ~-~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~-- 245 (570)
+ ...-+...++|..+-|.+-.. ..-+.|..||.+||+..+++
T Consensus 136 ~~~~~~~~~vvdE~~wsd~~~~~-----------------------------------~~~~~Y~~sK~lAEkaAw~fa~ 180 (327)
T KOG1502|consen 136 NGPNIGENSVVDEESWSDLDFCR-----------------------------------CKKLWYALSKTLAEKAAWEFAK 180 (327)
T ss_pred CCcCCCCCcccccccCCcHHHHH-----------------------------------hhHHHHHHHHHHHHHHHHHHHH
Confidence 3 211222344444444433221 01267999999999999988
Q ss_pred ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCC
Q 008324 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~ 325 (570)
..+++.+.+-|+.|+||.-.| ..+.....+....+|...... +....+|+|+|||+|++.|.+....
T Consensus 181 e~~~~lv~inP~lV~GP~l~~------~l~~s~~~~l~~i~G~~~~~~---n~~~~~VdVrDVA~AHv~a~E~~~a---- 247 (327)
T KOG1502|consen 181 ENGLDLVTINPGLVFGPGLQP------SLNSSLNALLKLIKGLAETYP---NFWLAFVDVRDVALAHVLALEKPSA---- 247 (327)
T ss_pred hCCccEEEecCCceECCCccc------ccchhHHHHHHHHhcccccCC---CCceeeEeHHHHHHHHHHHHcCccc----
Confidence 457999999999999987654 445555667777888654433 3344599999999999999973322
Q ss_pred CceEEecCCCCCcccHHHHHHHHhhhcccCCCC
Q 008324 326 ANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWI 358 (570)
Q Consensus 326 ~~iyni~s~~~~pit~~~l~~~i~~~~~~~p~~ 358 (570)
...|.|++. ..++.|+++.+.+.+...+..
T Consensus 248 ~GRyic~~~---~~~~~ei~~~l~~~~P~~~ip 277 (327)
T KOG1502|consen 248 KGRYICVGE---VVSIKEIADILRELFPDYPIP 277 (327)
T ss_pred CceEEEecC---cccHHHHHHHHHHhCCCCCCC
Confidence 457999886 456999999999999888754
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2e-30 Score=253.02 Aligned_cols=257 Identities=21% Similarity=0.322 Sum_probs=202.7
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc-eEEEe
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK-ITFVP 91 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k-v~~v~ 91 (570)
++||||||+||||+|.+..|++.| .+|.++..-..+.. +.+ ... +.+++
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G---~~vvV~DNL~~g~~--~~v-------------------------~~~~~~f~~ 50 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTG---HEVVVLDNLSNGHK--IAL-------------------------LKLQFKFYE 50 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCC---CeEEEEecCCCCCH--HHh-------------------------hhccCceEE
Confidence 589999999999999999999999 45566655433321 000 111 57899
Q ss_pred ccCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCccc---cHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceee
Q 008324 92 GDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFDE---RYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~~---~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~ 166 (570)
||+. |.+.++++++ ++|.|||+||...-.| .+-.+++.||.||.+|++++++. ++++||+.|||.+|
T Consensus 51 gDi~-------D~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~-gv~~~vFSStAavY 122 (329)
T COG1087 51 GDLL-------DRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQT-GVKKFIFSSTAAVY 122 (329)
T ss_pred eccc-------cHHHHHHHHHhcCCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHh-CCCEEEEecchhhc
Confidence 9999 6777777775 5999999999875433 34456999999999999999998 89999999999999
Q ss_pred cCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-
Q 008324 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (570)
Q Consensus 167 ~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~- 245 (570)
|.... .|++|+.+. .+.|+|+.||.+.|+++..+
T Consensus 123 G~p~~----~PI~E~~~~-----------------------------------------~p~NPYG~sKlm~E~iL~d~~ 157 (329)
T COG1087 123 GEPTT----SPISETSPL-----------------------------------------APINPYGRSKLMSEEILRDAA 157 (329)
T ss_pred CCCCC----cccCCCCCC-----------------------------------------CCCCcchhHHHHHHHHHHHHH
Confidence 98642 344433332 35689999999999999987
Q ss_pred -ccCCcEEEEecCceecCCCC-CCCccccCccchHHHHHHHhcCCceee--e------cCCCeeeeeeehHHHHHHHHHH
Q 008324 246 -KENLSLVIIRPTVVSGTYKE-PFPGWVEDLKTINTLFVASAQGNLRCL--V------GETKVIMDVIPVDMVVNAMIVA 315 (570)
Q Consensus 246 -~~~lp~~IvRPsiV~g~~~e-p~~gw~~~~~~~~~~i~~~~~G~~~~~--~------~~~~~~~d~VpVDdva~aii~a 315 (570)
..++.++++|-.++.|+..+ .+.-|..+.+....++..++.|....+ + .|+..++|+|||.|+|+|++.|
T Consensus 158 ~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~~A 237 (329)
T COG1087 158 KANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHVLA 237 (329)
T ss_pred HhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHHHH
Confidence 56799999999999997653 244566777778888888888876533 3 4567899999999999999999
Q ss_pred HHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 316 MVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 316 ~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
+..... .+...+||+++| +..|..|+++.+.+..|+.
T Consensus 238 l~~L~~-~g~~~~~NLG~G--~G~SV~evi~a~~~vtg~~ 274 (329)
T COG1087 238 LKYLKE-GGSNNIFNLGSG--NGFSVLEVIEAAKKVTGRD 274 (329)
T ss_pred HHHHHh-CCceeEEEccCC--CceeHHHHHHHHHHHhCCc
Confidence 986544 333479999999 8999999999999998853
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-31 Score=268.59 Aligned_cols=279 Identities=22% Similarity=0.352 Sum_probs=199.7
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++||+||||||+|.+|+++||.+-+ .+|+|+||.++.+.+.+|+++. +. .+.. |.+...++|+++.|
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~--~kv~cLVRA~s~E~a~~RL~~~-~~--~~~~--------~~e~~~~ri~vv~g 67 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSD--AKVICLVRAQSDEAALARLEKT-FD--LYRH--------WDELSADRVEVVAG 67 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCC--CcEEEEEecCCHHHHHHHHHHH-hh--hhhh--------hhhhhcceEEEEec
Confidence 5899999999999999999999765 7999999999999999999842 22 1111 22334689999999
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCCcc
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~g~ 172 (570)
|+++|++||++.++ +.+.+++|.|||+||.|++-.++.+....||.||.+++++|... +.|.|+||||..+.....+.
T Consensus 68 Dl~e~~lGL~~~~~-~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~g-k~Kp~~yVSsisv~~~~~~~ 145 (382)
T COG3320 68 DLAEPDLGLSERTW-QELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATG-KPKPLHYVSSISVGETEYYS 145 (382)
T ss_pred ccccccCCCCHHHH-HHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcC-CCceeEEEeeeeeccccccC
Confidence 99999999998887 48999999999999999999999999999999999999999986 78999999999987654321
Q ss_pred cccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-ccCCcE
Q 008324 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-KENLSL 251 (570)
Q Consensus 173 i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~-~~~lp~ 251 (570)
-.+....+. ++ +...-..+.+.|+.||+.||.++++. ..++|+
T Consensus 146 ~~~~~~~~~-------------------------~~-----------~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv 189 (382)
T COG3320 146 NFTVDFDEI-------------------------SP-----------TRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPV 189 (382)
T ss_pred CCccccccc-------------------------cc-----------cccccCccCCCcchhHHHHHHHHHHHhhcCCCe
Confidence 111100000 00 00112267899999999999999988 458999
Q ss_pred EEEecCceecCCCCCCCccccCccchHHHHHHHh-cCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhh------C--C
Q 008324 252 VIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASA-QGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHA------K--Q 322 (570)
Q Consensus 252 ~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~-~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~------~--~ 322 (570)
+|+||+.|.|..+ .|-.........++.++. .|..+ +.....|.+|+|.++.++.......+ . .
T Consensus 190 ~I~Rpg~I~gds~---tG~~n~~D~~~Rlv~~~~~lg~~P----~~~~~~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~ 262 (382)
T COG3320 190 TIFRPGYITGDSR---TGALNTRDFLTRLVLGLLQLGIAP----DSEYSLDMLPVDHVARAVVAPSVQVAEAIAALGAHS 262 (382)
T ss_pred EEEecCeeeccCc---cCccccchHHHHHHHHHHHhCCCC----CcccchhhCccceeeEEeehhhhhHHHHHHHhccCc
Confidence 9999999999866 343333344445554443 34332 22345566676666665544332221 0 1
Q ss_pred CCCCceEEecCCCCCcccHHHHHHHHhh
Q 008324 323 PSDANIYHVGSSLRNPVTLVSILDYGFV 350 (570)
Q Consensus 323 ~~~~~iyni~s~~~~pit~~~l~~~i~~ 350 (570)
+..-..|+ .......+...++.++..+
T Consensus 263 ~~~f~~~~-~~~~~~~i~l~~~~~w~~~ 289 (382)
T COG3320 263 DIRFNQLH-MLTHPDEIGLDEYVDWLIS 289 (382)
T ss_pred cchhhhee-cccCCCccchhHHHHhHhh
Confidence 11123454 2233378888899888877
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-29 Score=282.57 Aligned_cols=265 Identities=25% Similarity=0.411 Sum_probs=194.2
Q ss_pred CEEEEECCcchhHHHHHHHHHH--hCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 13 KTILVSGVTGFVAKVFIEKILR--VQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~--~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
|+|||||||||||++|+++|++ .+ .+|++++|+... .++. .+ ....+ ..+++++
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g---~~V~~l~R~~~~----~~~~-~~---------~~~~~-------~~~v~~~ 56 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRRE---ATVHVLVRRQSL----SRLE-AL---------AAYWG-------ADRVVPL 56 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCC---CEEEEEECcchH----HHHH-HH---------HHhcC-------CCcEEEE
Confidence 5899999999999999999995 44 689999995422 1211 11 00100 1578999
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCC
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~ 170 (570)
.+|+++++++++..+. +.+ +++|+||||||.+++........++|+.||.+++++|++. ++++|||+||..++|...
T Consensus 57 ~~Dl~~~~~~~~~~~~-~~l-~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~~SS~~v~g~~~ 133 (657)
T PRK07201 57 VGDLTEPGLGLSEADI-AEL-GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERL-QAATFHHVSSIAVAGDYE 133 (657)
T ss_pred ecccCCccCCcCHHHH-HHh-cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhc-CCCeEEEEeccccccCcc
Confidence 9999999988876664 355 8899999999998877777778899999999999999997 789999999999998654
Q ss_pred cccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccCCc
Q 008324 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLS 250 (570)
Q Consensus 171 g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp 250 (570)
+..+|...++ ...+.+.|+.||.++|+++.+. .+++
T Consensus 134 ~~~~e~~~~~-------------------------------------------~~~~~~~Y~~sK~~~E~~~~~~-~g~~ 169 (657)
T PRK07201 134 GVFREDDFDE-------------------------------------------GQGLPTPYHRTKFEAEKLVREE-CGLP 169 (657)
T ss_pred Cccccccchh-------------------------------------------hcCCCCchHHHHHHHHHHHHHc-CCCc
Confidence 3333322110 0034578999999999999863 5899
Q ss_pred EEEEecCceecCCCCCCCccccCccchH---HHHHHHhcC-CceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCC
Q 008324 251 LVIIRPTVVSGTYKEPFPGWVEDLKTIN---TLFVASAQG-NLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 251 ~~IvRPsiV~g~~~ep~~gw~~~~~~~~---~~i~~~~~G-~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~ 326 (570)
++|+||+.|||+.. .|..++..+.. .++...... ....+.+.+....+++||||++++++.++.. ....+
T Consensus 170 ~~ilRp~~v~G~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~~---~~~~g 243 (657)
T PRK07201 170 WRVYRPAVVVGDSR---TGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMHK---DGRDG 243 (657)
T ss_pred EEEEcCCeeeecCC---CCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHHhcC---cCCCC
Confidence 99999999999764 23333333222 222222111 1112345556778999999999999988752 11236
Q ss_pred ceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 327 NIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 327 ~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
++||++++ +++++.|+++.+.+.++..+
T Consensus 244 ~~~ni~~~--~~~s~~el~~~i~~~~g~~~ 271 (657)
T PRK07201 244 QTFHLTDP--KPQRVGDIYNAFARAAGAPP 271 (657)
T ss_pred CEEEeCCC--CCCcHHHHHHHHHHHhCCCc
Confidence 79999998 89999999999999988754
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.8e-29 Score=263.02 Aligned_cols=287 Identities=21% Similarity=0.257 Sum_probs=191.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.+.|+|||||||||||++|+++|++.+. .+|+++.|+.... .++. . . +. .....++++
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g--~~V~~l~r~~~~~---~~l~----~---------~-~~---~~~~~~~~~ 69 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTETP--HKVLALDVYNDKI---KHLL----E---------P-DT---VPWSGRIQF 69 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcCC--CEEEEEecCchhh---hhhh----c---------c-cc---ccCCCCeEE
Confidence 3457999999999999999999999731 5678888764221 1111 0 0 00 001247899
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCC---ccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceee
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK---FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~---f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~ 166 (570)
+.+|+. +.+....+++++|+|||+||... +.......+..|+.|+.+++++|++. + ++|||+||.++|
T Consensus 70 ~~~Dl~-------d~~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~-~-~r~v~~SS~~vY 140 (386)
T PLN02427 70 HRINIK-------HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N-KRLIHFSTCEVY 140 (386)
T ss_pred EEcCCC-------ChHHHHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhc-C-CEEEEEeeeeee
Confidence 999999 44445577788999999999653 23334455788999999999999986 4 899999999999
Q ss_pred cCCCc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008324 167 GERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (570)
Q Consensus 167 ~~~~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (570)
|...+ .++|. .+..++..... .+|+.. . ........+.+.|+.||.++|+++..+
T Consensus 141 g~~~~~~~~e~-----~p~~~~~~~~~------------~~e~~~---~----~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 196 (386)
T PLN02427 141 GKTIGSFLPKD-----HPLRQDPAFYV------------LKEDES---P----CIFGSIEKQRWSYACAKQLIERLIYAE 196 (386)
T ss_pred CCCcCCCCCcc-----ccccccccccc------------cccccc---c----cccCCCCccccchHHHHHHHHHHHHHH
Confidence 86432 12221 12111000000 000000 0 000000123467999999999999876
Q ss_pred --ccCCcEEEEecCceecCCCCCCCccc---cCc-cchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHh
Q 008324 246 --KENLSLVIIRPTVVSGTYKEPFPGWV---EDL-KTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAH 319 (570)
Q Consensus 246 --~~~lp~~IvRPsiV~g~~~ep~~gw~---~~~-~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~ 319 (570)
..+++++|+||+.|||+.....++-. ... .....++..+..|....+.+++++.+|+|||||+|++++.++...
T Consensus 197 ~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~ 276 (386)
T PLN02427 197 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENP 276 (386)
T ss_pred HhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCc
Confidence 35899999999999999764333210 011 112223345556766667788888999999999999999888632
Q ss_pred hCCCCCCceEEecCCCCCcccHHHHHHHHhhhccc
Q 008324 320 AKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 320 ~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~ 354 (570)
. ...+++||++++. .++++.|+++.+.+.++.
T Consensus 277 ~--~~~g~~yni~~~~-~~~s~~el~~~i~~~~g~ 308 (386)
T PLN02427 277 A--RANGHIFNVGNPN-NEVTVRQLAEMMTEVYAK 308 (386)
T ss_pred c--cccCceEEeCCCC-CCccHHHHHHHHHHHhcc
Confidence 1 1125799999861 389999999999998875
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-28 Score=257.21 Aligned_cols=267 Identities=18% Similarity=0.218 Sum_probs=190.2
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|++.+. .+|+++.|+.... .++. ...++.++.+
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~--~~V~~~~r~~~~~---~~~~-----------------------~~~~~~~~~~ 53 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTD--WEVYGMDMQTDRL---GDLV-----------------------NHPRMHFFEG 53 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCC--CeEEEEeCcHHHH---HHhc-----------------------cCCCeEEEeC
Confidence 6899999999999999999998631 5788888754211 1110 0246889999
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCC---ccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCC
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITK---FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~---f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~ 169 (570)
|+.+ +.+....+++++|+|||+||... ........+++|+.|+++++++|++. + ++|||+||+.+||..
T Consensus 54 Dl~~------~~~~~~~~~~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~-~-~~~v~~SS~~vyg~~ 125 (347)
T PRK11908 54 DITI------NKEWIEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTSEVYGMC 125 (347)
T ss_pred CCCC------CHHHHHHHHcCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhc-C-CeEEEEecceeeccC
Confidence 9973 22334467788999999998643 23445667899999999999999986 5 799999999999864
Q ss_pred Cc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--c
Q 008324 170 TG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--K 246 (570)
Q Consensus 170 ~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~ 246 (570)
.+ .+.|+. ++.+.. ....+.+.|+.||..+|+++..+ .
T Consensus 126 ~~~~~~ee~----~~~~~~-----------------------------------~~~~p~~~Y~~sK~~~e~~~~~~~~~ 166 (347)
T PRK11908 126 PDEEFDPEA----SPLVYG-----------------------------------PINKPRWIYACSKQLMDRVIWAYGME 166 (347)
T ss_pred CCcCcCccc----cccccC-----------------------------------cCCCccchHHHHHHHHHHHHHHHHHH
Confidence 32 122211 111000 00123468999999999999887 4
Q ss_pred cCCcEEEEecCceecCCCCCCCccccC-ccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCC
Q 008324 247 ENLSLVIIRPTVVSGTYKEPFPGWVED-LKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~ep~~gw~~~-~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~ 325 (570)
.+++++++||+.|||+...+...-.+. -.....++..+..|....+.+++++.+|+|||+|+|++++.++.... ....
T Consensus 167 ~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~-~~~~ 245 (347)
T PRK11908 167 EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIENKD-GVAS 245 (347)
T ss_pred cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHHhCcc-ccCC
Confidence 689999999999999876442111011 12233455566667665677788899999999999999999886321 1122
Q ss_pred CceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 326 ANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 326 ~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
+++||++++ .+.+|+.|+++.+.+.++..|
T Consensus 246 g~~yni~~~-~~~~s~~e~~~~i~~~~~~~~ 275 (347)
T PRK11908 246 GKIYNIGNP-KNNHSVRELANKMLELAAEYP 275 (347)
T ss_pred CCeEEeCCC-CCCcCHHHHHHHHHHHhcCcc
Confidence 679999985 147999999999999888654
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-28 Score=279.54 Aligned_cols=265 Identities=24% Similarity=0.284 Sum_probs=194.7
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
+||++|+|||||||||||++|+++|++.+++ .+|+++.|...... ...+. .. ....++
T Consensus 2 ~~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~-~~V~~~d~~~~~~~-~~~l~-------------~~-------~~~~~v 59 (668)
T PLN02260 2 ATYEPKNILITGAAGFIASHVANRLIRNYPD-YKIVVLDKLDYCSN-LKNLN-------------PS-------KSSPNF 59 (668)
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHhCCC-CEEEEEeCCCccch-hhhhh-------------hc-------ccCCCe
Confidence 5899999999999999999999999998654 46888877432111 11111 00 012578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHh--CCccEEEEcCccCCccc---cHHHHHHHhHHHHHHHHHHHHHccCceEEEEEec
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELW--NELDIMVNSAAITKFDE---RYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~--~~vdiViH~AA~v~f~~---~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vST 162 (570)
.++.+|+++ .+....++ .++|+|||+||....+. ......++|+.||.+++++|++.+.+++|||+||
T Consensus 60 ~~~~~Dl~d-------~~~~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS 132 (668)
T PLN02260 60 KFVKGDIAS-------ADLVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVST 132 (668)
T ss_pred EEEECCCCC-------hHHHHHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Confidence 899999994 33333333 57999999999876542 3356689999999999999999755899999999
Q ss_pred ceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHH
Q 008324 163 AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (570)
Q Consensus 163 a~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv 242 (570)
+.+||....... ....++.+ ..+.+.|+.||..+|+++
T Consensus 133 ~~vyg~~~~~~~-~~~~E~~~-----------------------------------------~~p~~~Y~~sK~~aE~~v 170 (668)
T PLN02260 133 DEVYGETDEDAD-VGNHEASQ-----------------------------------------LLPTNPYSATKAGAEMLV 170 (668)
T ss_pred hHHhCCCccccc-cCccccCC-----------------------------------------CCCCCCcHHHHHHHHHHH
Confidence 999986432100 00011010 024578999999999999
Q ss_pred HHh--ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhh
Q 008324 243 QQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHA 320 (570)
Q Consensus 243 ~~~--~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~ 320 (570)
..+ ..+++++|+||++|||+.+.+ . .....++..+..|....+++++++.+++|||||+|+++..++...
T Consensus 171 ~~~~~~~~l~~vilR~~~VyGp~~~~-----~--~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~- 242 (668)
T PLN02260 171 MAYGRSYGLPVITTRGNNVYGPNQFP-----E--KLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKG- 242 (668)
T ss_pred HHHHHHcCCCEEEECcccccCcCCCc-----c--cHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcC-
Confidence 876 358999999999999986532 1 122344555566666667789999999999999999999887521
Q ss_pred CCCCCCceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 321 KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 321 ~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
..+++||++++ +++++.|+++.+.+.++..+
T Consensus 243 ---~~~~vyni~~~--~~~s~~el~~~i~~~~g~~~ 273 (668)
T PLN02260 243 ---EVGHVYNIGTK--KERRVIDVAKDICKLFGLDP 273 (668)
T ss_pred ---CCCCEEEECCC--CeeEHHHHHHHHHHHhCCCC
Confidence 12579999998 88999999999999988643
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-28 Score=263.46 Aligned_cols=284 Identities=14% Similarity=0.116 Sum_probs=191.6
Q ss_pred HHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcc-c-------------HHHHHHHHHhhhhhHHHH
Q 008324 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID-S-------------AALRFQNEVLAKDVFNVL 71 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~-~-------------~~~rl~~~l~~~~~f~~l 71 (570)
.+.-+++|+|||||||||||++|+++|++.| .+|+++.|..... . ..+++. .+
T Consensus 41 ~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G---~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~----------~~ 107 (442)
T PLN02572 41 SSSSSKKKKVMVIGGDGYCGWATALHLSKRG---YEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVR----------RW 107 (442)
T ss_pred CCccccCCEEEEECCCcHHHHHHHHHHHHCC---CeEEEEeccccccccccccccccccccchHHHHH----------HH
Confidence 4456789999999999999999999999988 5667765422110 0 011111 01
Q ss_pred HhhhccccccccCCceEEEeccCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCcc----c--cHHHHHHHhHHHHHH
Q 008324 72 KEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD----E--RYDVAFGINTLGVIH 143 (570)
Q Consensus 72 ~~~~~~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~----~--~~~~~~~~Nv~gt~~ 143 (570)
... ...++.++.+|++ +.+....+++ ++|+|||+||..... + .....+++|+.||.+
T Consensus 108 ~~~--------~~~~v~~v~~Dl~-------d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~n 172 (442)
T PLN02572 108 KEV--------SGKEIELYVGDIC-------DFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLN 172 (442)
T ss_pred HHh--------hCCcceEEECCCC-------CHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHH
Confidence 100 0246889999999 4444556665 589999999764321 1 124457899999999
Q ss_pred HHHHHHHccCce-EEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhcccccc
Q 008324 144 LVNFAKKCVKLK-VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERA 222 (570)
Q Consensus 144 ll~la~~~~~l~-~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 222 (570)
++++|++. +++ +|||+||..+||.....++|...+++.... |+. +.
T Consensus 173 lleaa~~~-gv~~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~---------------------e~~-----------~~ 219 (442)
T PLN02572 173 VLFAIKEF-APDCHLVKLGTMGEYGTPNIDIEEGYITITHNGR---------------------TDT-----------LP 219 (442)
T ss_pred HHHHHHHh-CCCccEEEEecceecCCCCCCCcccccccccccc---------------------ccc-----------cc
Confidence 99999987 665 899999999998643233443221110000 000 00
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh--ccCCcEEEEecCceecCCCCCC---CccccC------c-cchHHHHHHHhcCCce
Q 008324 223 KLHGWPNTYVFTKTMGEMLMQQS--KENLSLVIIRPTVVSGTYKEPF---PGWVED------L-KTINTLFVASAQGNLR 290 (570)
Q Consensus 223 ~~~~~~n~Y~~sK~~aE~lv~~~--~~~lp~~IvRPsiV~g~~~ep~---~gw~~~------~-~~~~~~i~~~~~G~~~ 290 (570)
....+.+.|+.||..+|.++..+ ..+++++++||+.|||+...+. +.-+.. + .....++..+..|...
T Consensus 220 ~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i 299 (442)
T PLN02572 220 YPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPL 299 (442)
T ss_pred CCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchhhHHHHHHHHHhcCCCc
Confidence 00134578999999999999876 4589999999999999976431 111111 1 2233455566677766
Q ss_pred eeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhh---ccc
Q 008324 291 CLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVY---FTK 354 (570)
Q Consensus 291 ~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~---~~~ 354 (570)
.+++++++.+|+|||||+|++++.++.... ..+...+||+++ .++++.|+++.+.+. ++.
T Consensus 300 ~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~-~~g~~~i~Nigs---~~~si~el~~~i~~~~~~~g~ 362 (442)
T PLN02572 300 TVYGKGGQTRGFLDIRDTVRCIEIAIANPA-KPGEFRVFNQFT---EQFSVNELAKLVTKAGEKLGL 362 (442)
T ss_pred eecCCCCEEECeEEHHHHHHHHHHHHhChh-hcCceeEEEeCC---CceeHHHHHHHHHHHHHhhCC
Confidence 678899999999999999999999886321 122236899975 469999999999998 664
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=262.93 Aligned_cols=253 Identities=15% Similarity=0.179 Sum_probs=187.4
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++++|||||||||||++|+++|++.| .+|+++.|...+.. +.+. .+ . -..++.++
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G---~~V~~ldr~~~~~~--~~~~-~~------------~-------~~~~~~~~ 173 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRG---DEVIVIDNFFTGRK--ENLV-HL------------F-------GNPRFELI 173 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCC---CEEEEEeCCCCccH--hHhh-hh------------c-------cCCceEEE
Confidence 35799999999999999999999988 57788887543211 1110 00 0 01467788
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCC---ccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeec
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK---FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~---f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~ 167 (570)
.+|+.++ . +.++|+|||+||... ...+....+++|+.||.+++++|++. +. +|||+||.++||
T Consensus 174 ~~Di~~~-------~-----~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~-g~-r~V~~SS~~VYg 239 (436)
T PLN02166 174 RHDVVEP-------I-----LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GA-RFLLTSTSEVYG 239 (436)
T ss_pred ECccccc-------c-----ccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECcHHHhC
Confidence 9998742 1 247999999999653 23455677899999999999999997 54 899999999998
Q ss_pred CCCc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-
Q 008324 168 ERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (570)
Q Consensus 168 ~~~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~- 245 (570)
+..+ .++|..+.+..+. .+.+.|+.||..+|+++..+
T Consensus 240 ~~~~~p~~E~~~~~~~p~-----------------------------------------~p~s~Yg~SK~~aE~~~~~y~ 278 (436)
T PLN02166 240 DPLEHPQKETYWGNVNPI-----------------------------------------GERSCYDEGKRTAETLAMDYH 278 (436)
T ss_pred CCCCCCCCccccccCCCC-----------------------------------------CCCCchHHHHHHHHHHHHHHH
Confidence 6432 2333321100010 23467999999999999887
Q ss_pred -ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCC
Q 008324 246 -KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (570)
Q Consensus 246 -~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 324 (570)
..+++++++||++|||+...+. .-.....++..+..|....+++++++.+|+|+|+|+|++++.++.. . .
T Consensus 279 ~~~~l~~~ilR~~~vYGp~~~~~-----~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~--~-~- 349 (436)
T PLN02166 279 RGAGVEVRIARIFNTYGPRMCLD-----DGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEG--E-H- 349 (436)
T ss_pred HHhCCCeEEEEEccccCCCCCCC-----ccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhc--C-C-
Confidence 3589999999999999865321 1122345666777777777789999999999999999999988752 1 1
Q ss_pred CCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 325 ~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
..+||++++ +++|+.|+++.+.+.++..
T Consensus 350 -~giyNIgs~--~~~Si~ela~~I~~~~g~~ 377 (436)
T PLN02166 350 -VGPFNLGNP--GEFTMLELAEVVKETIDSS 377 (436)
T ss_pred -CceEEeCCC--CcEeHHHHHHHHHHHhCCC
Confidence 459999998 8999999999999998754
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-28 Score=251.37 Aligned_cols=263 Identities=17% Similarity=0.180 Sum_probs=183.8
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.||+|||||||||||++++++|++.| .+|++++|+.......+.+. ...+ ...+++++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~-------------~~~~------~~~~~~~~ 61 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRG---YTVKATVRDLTDRKKTEHLL-------------ALDG------AKERLKLF 61 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEECCCcchHHHHHHH-------------hccC------CCCceEEE
Confidence 47999999999999999999999998 57888899765432111111 0000 02478899
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc--ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecC
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD--ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~--~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~ 168 (570)
.+|+++ .+....+++++|+|||+||.+... ++....+++|+.||.+++++|++.+++++||++||..+++.
T Consensus 62 ~~Dl~~-------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~ 134 (322)
T PLN02986 62 KADLLE-------ESSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLF 134 (322)
T ss_pred ecCCCC-------cchHHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheec
Confidence 999994 444557778899999999986432 34445689999999999999998657899999999765432
Q ss_pred CCccc-ccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--
Q 008324 169 RTGLI-LENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (570)
Q Consensus 169 ~~g~i-~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~-- 245 (570)
..... ++..++|+.+.++... ....+.|+.||.++|.+++++
T Consensus 135 ~~~~~~~~~~~~E~~~~~p~~~-----------------------------------~~~~~~Y~~sK~~aE~~~~~~~~ 179 (322)
T PLN02986 135 RQPPIEANDVVDETFFSDPSLC-----------------------------------RETKNWYPLSKILAENAAWEFAK 179 (322)
T ss_pred CCccCCCCCCcCcccCCChHHh-----------------------------------hccccchHHHHHHHHHHHHHHHH
Confidence 11111 1122333222222100 023467999999999999887
Q ss_pred ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCC
Q 008324 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~ 325 (570)
..+++++++||+.|||+...|..+ ....++..+..|.. ..+ ....++|+|+|+|++++.++... ..
T Consensus 180 ~~~~~~~~lrp~~v~Gp~~~~~~~------~~~~~~~~~~~g~~--~~~--~~~~~~v~v~Dva~a~~~al~~~--~~-- 245 (322)
T PLN02986 180 DNGIDMVVLNPGFICGPLLQPTLN------FSVELIVDFINGKN--LFN--NRFYRFVDVRDVALAHIKALETP--SA-- 245 (322)
T ss_pred HhCCeEEEEcccceeCCCCCCCCC------ccHHHHHHHHcCCC--CCC--CcCcceeEHHHHHHHHHHHhcCc--cc--
Confidence 358999999999999997654211 11234445555543 122 45679999999999999988632 11
Q ss_pred CceEEecCCCCCcccHHHHHHHHhhhccc
Q 008324 326 ANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 326 ~~iyni~s~~~~pit~~~l~~~i~~~~~~ 354 (570)
+.+||++ + .++++.++++.+.+.++.
T Consensus 246 ~~~yni~-~--~~~s~~e~~~~i~~~~~~ 271 (322)
T PLN02986 246 NGRYIID-G--PIMSVNDIIDILRELFPD 271 (322)
T ss_pred CCcEEEe-c--CCCCHHHHHHHHHHHCCC
Confidence 3489995 4 579999999999998864
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-28 Score=254.77 Aligned_cols=254 Identities=18% Similarity=0.255 Sum_probs=184.7
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|||||||||||++|+++|++.|.++ |.++.|..+.. ....+. .. . ...++.++.+
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~--v~~~~~~~~~~-~~~~~~-------------~~-~------~~~~~~~~~~ 58 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDA--VVVVDKLTYAG-NLMSLA-------------PV-A------QSERFAFEKV 58 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCE--EEEEecCcccc-chhhhh-------------hc-c------cCCceEEEEC
Confidence 689999999999999999999988432 33333322111 111111 00 0 0246788999
Q ss_pred cCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHc--------cCceEEEE
Q 008324 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKC--------VKLKVFVH 159 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~--------~~l~~~V~ 159 (570)
|+++ .+..+.+++ ++|+|||+||....+ +..+..+++|+.||.+++++|++. +++++|||
T Consensus 59 Dl~d-------~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~ 131 (355)
T PRK10217 59 DICD-------RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHH 131 (355)
T ss_pred CCcC-------hHHHHHHHhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEE
Confidence 9994 344456666 489999999986543 345678999999999999999863 35789999
Q ss_pred EecceeecCCCc---ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHH
Q 008324 160 VSTAYVAGERTG---LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (570)
Q Consensus 160 vSTa~v~~~~~g---~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+||..+|+...+ .++|. .+. .+.+.|+.||.
T Consensus 132 ~SS~~vyg~~~~~~~~~~E~-----~~~-----------------------------------------~p~s~Y~~sK~ 165 (355)
T PRK10217 132 ISTDEVYGDLHSTDDFFTET-----TPY-----------------------------------------APSSPYSASKA 165 (355)
T ss_pred ecchhhcCCCCCCCCCcCCC-----CCC-----------------------------------------CCCChhHHHHH
Confidence 999999985321 12222 111 23468999999
Q ss_pred HHHHHHHHh--ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHH
Q 008324 237 MGEMLMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (570)
Q Consensus 237 ~aE~lv~~~--~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~ 314 (570)
.+|.++..+ ..+++++++||+.|||+...| + .....++.....|....+++++++.+|++||||+|.+++.
T Consensus 166 ~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~-----~--~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~ 238 (355)
T PRK10217 166 SSDHLVRAWLRTYGLPTLITNCSNNYGPYHFP-----E--KLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYC 238 (355)
T ss_pred HHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCc-----c--cHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHH
Confidence 999999876 458999999999999987532 1 1233445556666655677899999999999999999998
Q ss_pred HHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 315 AMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 315 a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
++.. .. .+++||++++ +++|+.++++.+.+.++..
T Consensus 239 ~~~~--~~--~~~~yni~~~--~~~s~~~~~~~i~~~~~~~ 273 (355)
T PRK10217 239 VATT--GK--VGETYNIGGH--NERKNLDVVETICELLEEL 273 (355)
T ss_pred HHhc--CC--CCCeEEeCCC--CcccHHHHHHHHHHHhccc
Confidence 8852 11 2579999999 8999999999999988764
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.3e-28 Score=251.35 Aligned_cols=260 Identities=18% Similarity=0.199 Sum_probs=182.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.++|+|||||||||||++|+++|++.| ++|.+++|+...... ..+. + +. + ...++.+
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G---~~V~~~~r~~~~~~~-~~~~-~---------~~---~------~~~~~~~ 64 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERG---YTVKGTVRNPDDPKN-THLR-E---------LE---G------GKERLIL 64 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCc---CEEEEEeCCchhhhH-HHHH-H---------hh---C------CCCcEEE
Confidence 468999999999999999999999998 678888887542111 0010 0 00 0 0146888
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecc-eeecC
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA-YVAGE 168 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa-~v~~~ 168 (570)
+.+|+++ .+....+++++|+|||+||... +.....+++|+.||.+++++|++. ++++|||+||. .+||.
T Consensus 65 ~~~Dl~d-------~~~~~~~~~~~d~Vih~A~~~~--~~~~~~~~~nv~gt~~ll~aa~~~-~v~r~V~~SS~~avyg~ 134 (342)
T PLN02214 65 CKADLQD-------YEALKAAIDGCDGVFHTASPVT--DDPEQMVEPAVNGAKFVINAAAEA-KVKRVVITSSIGAVYMD 134 (342)
T ss_pred EecCcCC-------hHHHHHHHhcCCEEEEecCCCC--CCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeccceeeecc
Confidence 9999994 4445577789999999999753 456777999999999999999986 78999999996 57764
Q ss_pred CCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--c
Q 008324 169 RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--K 246 (570)
Q Consensus 169 ~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~ 246 (570)
.... .+..++|+++.+.+.. ..+.+.|+.||..+|++++.+ .
T Consensus 135 ~~~~-~~~~~~E~~~~~~~~~-----------------------------------~~p~~~Y~~sK~~aE~~~~~~~~~ 178 (342)
T PLN02214 135 PNRD-PEAVVDESCWSDLDFC-----------------------------------KNTKNWYCYGKMVAEQAAWETAKE 178 (342)
T ss_pred CCCC-CCcccCcccCCChhhc-----------------------------------cccccHHHHHHHHHHHHHHHHHHH
Confidence 3210 0111222222111000 024568999999999999887 3
Q ss_pred cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCC
Q 008324 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~ 326 (570)
.+++++++||+.|||+...+. . ......+.....|.... . ++..+|+|||+|+|++++.++... .. +
T Consensus 179 ~g~~~v~lRp~~vyGp~~~~~--~----~~~~~~~~~~~~g~~~~-~--~~~~~~~i~V~Dva~a~~~al~~~--~~--~ 245 (342)
T PLN02214 179 KGVDLVVLNPVLVLGPPLQPT--I----NASLYHVLKYLTGSAKT-Y--ANLTQAYVDVRDVALAHVLVYEAP--SA--S 245 (342)
T ss_pred cCCcEEEEeCCceECCCCCCC--C----CchHHHHHHHHcCCccc-C--CCCCcCeeEHHHHHHHHHHHHhCc--cc--C
Confidence 589999999999999865431 1 11112223444554432 2 345789999999999999998632 11 3
Q ss_pred ceEEecCCCCCcccHHHHHHHHhhhccc
Q 008324 327 NIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 327 ~iyni~s~~~~pit~~~l~~~i~~~~~~ 354 (570)
..||++++ ++++.++++.+.+.++.
T Consensus 246 g~yn~~~~---~~~~~el~~~i~~~~~~ 270 (342)
T PLN02214 246 GRYLLAES---ARHRGEVVEILAKLFPE 270 (342)
T ss_pred CcEEEecC---CCCHHHHHHHHHHHCCC
Confidence 58999763 68999999999998754
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.3e-28 Score=274.07 Aligned_cols=272 Identities=19% Similarity=0.253 Sum_probs=196.2
Q ss_pred HHhhcCCCEEEEECCcchhHHHHHHHHHHh-CCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccC
Q 008324 6 VVEFLENKTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~LvekLl~~-~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
-..|.++|+|||||||||||++|+++|++. + ++|+++.|..... .++. ..
T Consensus 309 ~~~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g---~~V~~l~r~~~~~---~~~~-----------------------~~ 359 (660)
T PRK08125 309 ACSAKRRTRVLILGVNGFIGNHLTERLLRDDN---YEVYGLDIGSDAI---SRFL-----------------------GH 359 (660)
T ss_pred hhhhhcCCEEEEECCCchHHHHHHHHHHhCCC---cEEEEEeCCchhh---hhhc-----------------------CC
Confidence 456778899999999999999999999985 5 5788888865321 1100 02
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCC---ccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEe
Q 008324 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK---FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~---f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vS 161 (570)
+++.++.||++++ .+..+.+++++|+|||+||... +.......+++|+.||.+++++|++. + ++|||+|
T Consensus 360 ~~~~~~~gDl~d~------~~~l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~-~-~~~V~~S 431 (660)
T PRK08125 360 PRFHFVEGDISIH------SEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKY-N-KRIIFPS 431 (660)
T ss_pred CceEEEeccccCc------HHHHHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhc-C-CeEEEEc
Confidence 4688999999952 2333456789999999999754 33445567899999999999999996 5 7999999
Q ss_pred cceeecCCCc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHH
Q 008324 162 TAYVAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (570)
Q Consensus 162 Ta~v~~~~~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~ 240 (570)
|+++||...+ .++|+ .+..+. .....+.+.|+.||.++|+
T Consensus 432 S~~vyg~~~~~~~~E~-----~~~~~~----------------------------------~p~~~p~s~Yg~sK~~~E~ 472 (660)
T PRK08125 432 TSEVYGMCTDKYFDED-----TSNLIV----------------------------------GPINKQRWIYSVSKQLLDR 472 (660)
T ss_pred chhhcCCCCCCCcCcc-----cccccc----------------------------------CCCCCCccchHHHHHHHHH
Confidence 9999986332 23332 111000 0000233579999999999
Q ss_pred HHHHh--ccCCcEEEEecCceecCCCCCCCccccC-ccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHH
Q 008324 241 LMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVED-LKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (570)
Q Consensus 241 lv~~~--~~~lp~~IvRPsiV~g~~~ep~~gw~~~-~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~ 317 (570)
++..+ ..+++++++||++|||+........... ......++..+..|....+.+++++.+|+|||+|+|++++.++.
T Consensus 473 ~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~ 552 (660)
T PRK08125 473 VIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIE 552 (660)
T ss_pred HHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHh
Confidence 99886 3489999999999999876332111000 11233455566667666677889999999999999999999886
Q ss_pred HhhCCCCCCceEEecCCCCC-cccHHHHHHHHhhhcccCC
Q 008324 318 AHAKQPSDANIYHVGSSLRN-PVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 318 ~~~~~~~~~~iyni~s~~~~-pit~~~l~~~i~~~~~~~p 356 (570)
... ....+++||++++ . ++|+.|+++.+.+.++..+
T Consensus 553 ~~~-~~~~g~iyni~~~--~~~~s~~el~~~i~~~~g~~~ 589 (660)
T PRK08125 553 NKD-NRCDGQIINIGNP--DNEASIRELAEMLLASFEKHP 589 (660)
T ss_pred ccc-cccCCeEEEcCCC--CCceeHHHHHHHHHHHhccCc
Confidence 321 1123679999987 4 6999999999999988643
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-28 Score=259.81 Aligned_cols=253 Identities=15% Similarity=0.188 Sum_probs=185.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.++|+|||||||||||++|++.|++.| .+|+++.|...+. .+.+.. . +...++..
T Consensus 117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G---~~V~~ld~~~~~~--~~~~~~-------------~-------~~~~~~~~ 171 (442)
T PLN02206 117 RKGLRVVVTGGAGFVGSHLVDRLMARG---DSVIVVDNFFTGR--KENVMH-------------H-------FSNPNFEL 171 (442)
T ss_pred cCCCEEEEECcccHHHHHHHHHHHHCc---CEEEEEeCCCccc--hhhhhh-------------h-------ccCCceEE
Confidence 467999999999999999999999998 5677777643221 111110 0 01246788
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCC---ccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceee
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK---FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~---f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~ 166 (570)
+.+|+.++ .+.++|+|||+||... ...+....+++|+.||.+++++|++. +. +|||+||..+|
T Consensus 172 i~~D~~~~------------~l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~-g~-r~V~~SS~~VY 237 (442)
T PLN02206 172 IRHDVVEP------------ILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTSEVY 237 (442)
T ss_pred EECCccCh------------hhcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECChHHh
Confidence 89998732 1246999999999653 23455677899999999999999997 54 89999999999
Q ss_pred cCCCc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008324 167 GERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (570)
Q Consensus 167 ~~~~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (570)
+...+ ..+|..+.+..+. ...+.|+.||..+|.++..+
T Consensus 238 g~~~~~p~~E~~~~~~~P~-----------------------------------------~~~s~Y~~SK~~aE~~~~~y 276 (442)
T PLN02206 238 GDPLQHPQVETYWGNVNPI-----------------------------------------GVRSCYDEGKRTAETLTMDY 276 (442)
T ss_pred CCCCCCCCCccccccCCCC-----------------------------------------CccchHHHHHHHHHHHHHHH
Confidence 86431 2233321100000 22468999999999999876
Q ss_pred --ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCC
Q 008324 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQP 323 (570)
Q Consensus 246 --~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~ 323 (570)
..+++++++||++|||+...+..+ .....++..+..|....+++++++.+|++||+|+|++++.++.. ..
T Consensus 277 ~~~~g~~~~ilR~~~vyGp~~~~~~~-----~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~---~~ 348 (442)
T PLN02206 277 HRGANVEVRIARIFNTYGPRMCIDDG-----RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEG---EH 348 (442)
T ss_pred HHHhCCCeEEEEeccccCCCCCcccc-----chHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhc---CC
Confidence 358999999999999986432111 12334556666666667788999999999999999999988752 11
Q ss_pred CCCceEEecCCCCCcccHHHHHHHHhhhccc
Q 008324 324 SDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 324 ~~~~iyni~s~~~~pit~~~l~~~i~~~~~~ 354 (570)
..+||++++ +++++.|+++.+.+.++.
T Consensus 349 --~g~yNIgs~--~~~sl~Elae~i~~~~g~ 375 (442)
T PLN02206 349 --VGPFNLGNP--GEFTMLELAKVVQETIDP 375 (442)
T ss_pred --CceEEEcCC--CceeHHHHHHHHHHHhCC
Confidence 458999998 899999999999998874
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=247.89 Aligned_cols=263 Identities=16% Similarity=0.151 Sum_probs=180.4
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+||+|||||||||||++|+++|++.| ++|.+++|+.........+. .... ..+++.++
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~-------------~~~~------~~~~~~~~ 60 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRG---YTVKATVRDPNDPKKTEHLL-------------ALDG------AKERLHLF 60 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCC---CEEEEEEcCCCchhhHHHHH-------------hccC------CCCceEEE
Confidence 47899999999999999999999998 57888888754321111111 0000 02478899
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc--cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecce--ee
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY--VA 166 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f--~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~--v~ 166 (570)
.+|+++ .+....+++++|+|||+||.... .++.+..+++|+.||.+++++|.+..++++||++||+. ++
T Consensus 61 ~~Dl~~-------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y 133 (322)
T PLN02662 61 KANLLE-------EGSFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAY 133 (322)
T ss_pred eccccC-------cchHHHHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcC
Confidence 999995 33345778899999999997643 23334678999999999999998865788999999975 35
Q ss_pred cCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-
Q 008324 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (570)
Q Consensus 167 ~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~- 245 (570)
+... ..++.+.+|+.+..+... ....+.|+.||.++|++++.+
T Consensus 134 ~~~~-~~~~~~~~E~~~~~p~~~-----------------------------------~~~~~~Y~~sK~~~E~~~~~~~ 177 (322)
T PLN02662 134 NGKP-LTPDVVVDETWFSDPAFC-----------------------------------EESKLWYVLSKTLAEEAAWKFA 177 (322)
T ss_pred CCcC-CCCCCcCCcccCCChhHh-----------------------------------hcccchHHHHHHHHHHHHHHHH
Confidence 4321 111112222222111100 022467999999999999876
Q ss_pred -ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCC
Q 008324 246 -KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (570)
Q Consensus 246 -~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 324 (570)
..+++++++||+.|||+...+.. ......+..+..|.. . .++..+|+|||+|+|++++.++... ..
T Consensus 178 ~~~~~~~~~lRp~~v~Gp~~~~~~------~~~~~~~~~~~~~~~-~---~~~~~~~~i~v~Dva~a~~~~~~~~-~~-- 244 (322)
T PLN02662 178 KENGIDMVTINPAMVIGPLLQPTL------NTSAEAILNLINGAQ-T---FPNASYRWVDVRDVANAHIQAFEIP-SA-- 244 (322)
T ss_pred HHcCCcEEEEeCCcccCCCCCCCC------CchHHHHHHHhcCCc-c---CCCCCcCeEEHHHHHHHHHHHhcCc-Cc--
Confidence 35899999999999998764421 112233444444432 1 2346789999999999999988522 11
Q ss_pred CCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 325 ~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
...||++ + .++++.|+++.+.+.++..
T Consensus 245 -~~~~~~~-g--~~~s~~e~~~~i~~~~~~~ 271 (322)
T PLN02662 245 -SGRYCLV-E--RVVHYSEVVKILHELYPTL 271 (322)
T ss_pred -CCcEEEe-C--CCCCHHHHHHHHHHHCCCC
Confidence 3468886 4 5799999999999987643
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.6e-28 Score=253.04 Aligned_cols=277 Identities=25% Similarity=0.363 Sum_probs=196.0
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
+|||||||||||++|+++|++.|+. .+|++++|+.......+|+.+.+ +. ..... ......++.++.||
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~-~~V~~l~R~~~~~~~~~~l~~~~-~~--------~~~~~-~~~~~~~v~~~~~D 69 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQ-AKVICLVRAASEEHAMERLREAL-RS--------YRLWQ-EDLARERIEVVAGD 69 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCC-CEEEEEEccCCHHHHHHHHHHHH-HH--------hCCCC-chhhhCCEEEEeCC
Confidence 5899999999999999999998743 47999999887665556655221 10 00000 00001579999999
Q ss_pred CCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCCcc-
Q 008324 94 ISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL- 172 (570)
Q Consensus 94 l~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~g~- 172 (570)
++++.+|+++.+. ..+.+++|+|||+||.+++..+++...++|+.|+.+++++|.+. +.++|||+||..+++.....
T Consensus 70 ~~~~~~gl~~~~~-~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~-~~~~~v~iSS~~v~~~~~~~~ 147 (367)
T TIGR01746 70 LSEPRLGLSDAEW-ERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASG-RAKPLHYVSTISVLAAIDLST 147 (367)
T ss_pred cCcccCCcCHHHH-HHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhC-CCceEEEEccccccCCcCCCC
Confidence 9999999987765 46778999999999999888888888899999999999999986 77889999999998763211
Q ss_pred cccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-ccCCcE
Q 008324 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-KENLSL 251 (570)
Q Consensus 173 i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~-~~~lp~ 251 (570)
+.|. .+... ....+.+.|+.||+.+|.++.+. ..++++
T Consensus 148 ~~~~-----~~~~~------------------------------------~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~ 186 (367)
T TIGR01746 148 VTED-----DAIVT------------------------------------PPPGLAGGYAQSKWVAELLVREASDRGLPV 186 (367)
T ss_pred cccc-----ccccc------------------------------------cccccCCChHHHHHHHHHHHHHHHhcCCCE
Confidence 1111 10000 00124578999999999999876 348999
Q ss_pred EEEecCceecCCCCCCCccccCccchHHHHHHH-hcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEE
Q 008324 252 VIIRPTVVSGTYKEPFPGWVEDLKTINTLFVAS-AQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (570)
Q Consensus 252 ~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~-~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn 330 (570)
+|+||+.|+|+.. .|..........++... ..|. ++.......+++||||++++++.++.... ....+++||
T Consensus 187 ~i~Rpg~v~G~~~---~g~~~~~~~~~~~~~~~~~~~~---~p~~~~~~~~~~~vddva~ai~~~~~~~~-~~~~~~~~~ 259 (367)
T TIGR01746 187 TIVRPGRILGNSY---TGAINSSDILWRMVKGCLALGA---YPDSPELTEDLTPVDYVARAIVALSSQPA-ASAGGPVFH 259 (367)
T ss_pred EEECCCceeecCC---CCCCCchhHHHHHHHHHHHhCC---CCCCCccccCcccHHHHHHHHHHHHhCCC-cccCCceEE
Confidence 9999999999733 22211112222233222 2222 22222236789999999999998875321 101157999
Q ss_pred ecCCCCCcccHHHHHHHHhhhccc
Q 008324 331 VGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 331 i~s~~~~pit~~~l~~~i~~~~~~ 354 (570)
++++ ++++|.++++.+.+ .+.
T Consensus 260 v~~~--~~~s~~e~~~~i~~-~g~ 280 (367)
T TIGR01746 260 VVNP--EPVSLDEFLEWLER-AGY 280 (367)
T ss_pred ecCC--CCCCHHHHHHHHHH-cCC
Confidence 9998 89999999999988 554
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.9e-28 Score=253.25 Aligned_cols=257 Identities=16% Similarity=0.122 Sum_probs=186.1
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+|||||||||||++|++.|++.| ++|.++.|........ ....+.++
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G---~~V~~v~r~~~~~~~~---------------------------~~~~~~~~ 69 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEG---HYIIASDWKKNEHMSE---------------------------DMFCHEFH 69 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCC---CEEEEEEecccccccc---------------------------ccccceEE
Confidence 56899999999999999999999988 6778888864321000 00134678
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCC---c-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceee
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK---F-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~---f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~ 166 (570)
.+|++ +.+....+++++|+|||+||.+. + ..........|+.|+.+++++|++. ++++|||+||..+|
T Consensus 70 ~~Dl~-------d~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~-~vk~~V~~SS~~vY 141 (370)
T PLN02695 70 LVDLR-------VMENCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARIN-GVKRFFYASSACIY 141 (370)
T ss_pred ECCCC-------CHHHHHHHHhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHh-CCCEEEEeCchhhc
Confidence 89999 44444566778999999998753 2 1233445788999999999999986 89999999999999
Q ss_pred cCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-
Q 008324 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (570)
Q Consensus 167 ~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~- 245 (570)
+......++.++.|+... ...+.+.|+.+|..+|+++..+
T Consensus 142 g~~~~~~~~~~~~E~~~~---------------------------------------p~~p~s~Yg~sK~~~E~~~~~~~ 182 (370)
T PLN02695 142 PEFKQLETNVSLKESDAW---------------------------------------PAEPQDAYGLEKLATEELCKHYT 182 (370)
T ss_pred CCccccCcCCCcCcccCC---------------------------------------CCCCCCHHHHHHHHHHHHHHHHH
Confidence 864321111112211100 0034578999999999999876
Q ss_pred -ccCCcEEEEecCceecCCCCCCCccccCc-cchHHHHHHHhc-CCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCC
Q 008324 246 -KENLSLVIIRPTVVSGTYKEPFPGWVEDL-KTINTLFVASAQ-GNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQ 322 (570)
Q Consensus 246 -~~~lp~~IvRPsiV~g~~~ep~~gw~~~~-~~~~~~i~~~~~-G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~ 322 (570)
..+++++|+||+.|||+... |..+. ..+..++..+.+ +....+++++++.+++|||+|++++++.++...
T Consensus 183 ~~~g~~~~ilR~~~vyGp~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~~--- 255 (370)
T PLN02695 183 KDFGIECRIGRFHNIYGPFGT----WKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTKSD--- 255 (370)
T ss_pred HHhCCCEEEEEECCccCCCCC----ccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHhcc---
Confidence 45899999999999998542 21111 123345544444 344567789999999999999999999876521
Q ss_pred CCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 323 PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 323 ~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
. +++||++++ +++++.++++.+.+..+..
T Consensus 256 ~--~~~~nv~~~--~~~s~~el~~~i~~~~g~~ 284 (370)
T PLN02695 256 F--REPVNIGSD--EMVSMNEMAEIALSFENKK 284 (370)
T ss_pred C--CCceEecCC--CceeHHHHHHHHHHHhCCC
Confidence 1 468999998 8999999999998887753
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-27 Score=248.84 Aligned_cols=265 Identities=17% Similarity=0.185 Sum_probs=179.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++|||||||||||++|+++|++.| .+|.+++|+.........+. ..+ . .+++.+
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~--------------~~~----~--~~~~~~ 63 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKG---YAVNTTVRDPENQKKIAHLR--------------ALQ----E--LGDLKI 63 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCC---CEEEEEECCCCCHHHHHHHH--------------hcC----C--CCceEE
Confidence 458999999999999999999999988 57788888754321111100 000 0 136889
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc--ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeec
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD--ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~--~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~ 167 (570)
+.+|+++ .+....+++++|+|||+||...+. ++....+++|+.|+.+++++|.+..++++||++||+.+++
T Consensus 64 ~~~Dl~d-------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g 136 (338)
T PLN00198 64 FGADLTD-------EESFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVS 136 (338)
T ss_pred EEcCCCC-------hHHHHHHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeee
Confidence 9999994 444457778899999999976543 3334567999999999999998865689999999999887
Q ss_pred CCC----c-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHH
Q 008324 168 ERT----G-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (570)
Q Consensus 168 ~~~----g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv 242 (570)
... + .++|+... . ... ++. ...+.+.|+.||..+|.++
T Consensus 137 ~~~~~~~~~~~~E~~~~-----~-~~~--------------------~~~-----------~~~p~~~Y~~sK~~~E~~~ 179 (338)
T PLN00198 137 INKLSGTGLVMNEKNWT-----D-VEF--------------------LTS-----------EKPPTWGYPASKTLAEKAA 179 (338)
T ss_pred ccCCCCCCceeccccCC-----c-hhh--------------------hhh-----------cCCccchhHHHHHHHHHHH
Confidence 531 1 23332211 0 000 000 0034467999999999999
Q ss_pred HHh--ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeec-CC----CeeeeeeehHHHHHHHHHH
Q 008324 243 QQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG-ET----KVIMDVIPVDMVVNAMIVA 315 (570)
Q Consensus 243 ~~~--~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~-~~----~~~~d~VpVDdva~aii~a 315 (570)
+.+ ..+++++++||+.|||+...+. . .....++..+..|....+.+ ++ +..+|+|||||+|++++.+
T Consensus 180 ~~~~~~~~~~~~~~R~~~vyGp~~~~~---~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~ 253 (338)
T PLN00198 180 WKFAEENNIDLITVIPTLMAGPSLTSD---I---PSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFL 253 (338)
T ss_pred HHHHHhcCceEEEEeCCceECCCccCC---C---CCcHHHHHHHHcCCccccccccccccccCCcceeEHHHHHHHHHHH
Confidence 887 3589999999999999875321 1 11112233444444322333 11 2247999999999999988
Q ss_pred HHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhccc
Q 008324 316 MVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 316 ~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~ 354 (570)
+... . . +..|+ +++ .++++.++++.+.+.++.
T Consensus 254 ~~~~-~-~--~~~~~-~~~--~~~s~~el~~~i~~~~~~ 285 (338)
T PLN00198 254 AEKE-S-A--SGRYI-CCA--ANTSVPELAKFLIKRYPQ 285 (338)
T ss_pred hhCc-C-c--CCcEE-Eec--CCCCHHHHHHHHHHHCCC
Confidence 7632 1 1 34685 445 578999999999887654
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-27 Score=244.48 Aligned_cols=263 Identities=15% Similarity=0.155 Sum_probs=183.0
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.||+|||||||||||++|+++|++.| .+|++++|+.........+. ...+ ...++.++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~-------------~~~~------~~~~~~~~ 61 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRG---YTINATVRDPKDRKKTDHLL-------------ALDG------AKERLKLF 61 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCC---CEEEEEEcCCcchhhHHHHH-------------hccC------CCCceEEE
Confidence 47999999999999999999999998 56778888764321111100 0000 02468899
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeec
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~ 167 (570)
.+|+++ .+..+.+++++|+|||+||..... +.+...+++|+.|+.+++++|.+..+.++||++||..+++
T Consensus 62 ~~D~~d-------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~ 134 (325)
T PLN02989 62 KADLLD-------EGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVL 134 (325)
T ss_pred eCCCCC-------chHHHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhhee
Confidence 999994 444557788899999999975432 3456778999999999999998854678999999987765
Q ss_pred CCCcc-cccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-
Q 008324 168 ERTGL-ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (570)
Q Consensus 168 ~~~g~-i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~- 245 (570)
..... -++.+++|+.+.++... ....+.|+.||..+|.++..+
T Consensus 135 ~~~~~~~~~~~~~E~~~~~p~~~-----------------------------------~~~~~~Y~~sK~~~E~~~~~~~ 179 (325)
T PLN02989 135 APETKLGPNDVVDETFFTNPSFA-----------------------------------EERKQWYVLSKTLAEDAAWRFA 179 (325)
T ss_pred cCCccCCCCCccCcCCCCchhHh-----------------------------------cccccchHHHHHHHHHHHHHHH
Confidence 42110 01122333333322110 022467999999999999876
Q ss_pred -ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCC
Q 008324 246 -KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (570)
Q Consensus 246 -~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 324 (570)
..+++++++||+.|||+...+.. +....++..+..|.... + ....+++||+|+|++++.++... . .
T Consensus 180 ~~~~~~~~ilR~~~vyGp~~~~~~------~~~~~~i~~~~~~~~~~--~--~~~r~~i~v~Dva~a~~~~l~~~-~-~- 246 (325)
T PLN02989 180 KDNEIDLIVLNPGLVTGPILQPTL------NFSVAVIVELMKGKNPF--N--TTHHRFVDVRDVALAHVKALETP-S-A- 246 (325)
T ss_pred HHcCCeEEEEcCCceeCCCCCCCC------CchHHHHHHHHcCCCCC--C--CcCcCeeEHHHHHHHHHHHhcCc-c-c-
Confidence 35899999999999998765421 12234455555554321 2 24579999999999999988532 1 1
Q ss_pred CCceEEecCCCCCcccHHHHHHHHhhhccc
Q 008324 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 325 ~~~iyni~s~~~~pit~~~l~~~i~~~~~~ 354 (570)
+.+||++ + .++|++++++.+.+.++.
T Consensus 247 -~~~~ni~-~--~~~s~~ei~~~i~~~~~~ 272 (325)
T PLN02989 247 -NGRYIID-G--PVVTIKDIENVLREFFPD 272 (325)
T ss_pred -CceEEEe-c--CCCCHHHHHHHHHHHCCC
Confidence 3589995 4 579999999999998864
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-27 Score=246.19 Aligned_cols=263 Identities=16% Similarity=0.178 Sum_probs=187.4
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
|.+||+|||||||||||+++++.|++.| .+|+++.|.........+ . +. ...++.
T Consensus 1 ~~~~k~ilItGatG~IG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~---~---------~~----------~~~~~~ 55 (349)
T TIGR02622 1 FWQGKKVLVTGHTGFKGSWLSLWLLELG---AEVYGYSLDPPTSPNLFE---L---------LN----------LAKKIE 55 (349)
T ss_pred CcCCCEEEEECCCChhHHHHHHHHHHCC---CEEEEEeCCCccchhHHH---H---------Hh----------hcCCce
Confidence 5789999999999999999999999998 677888887643221110 0 00 013577
Q ss_pred EEeccCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecc
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa 163 (570)
++.+|+++ .+....+++ ++|+|||+||..... +.+...+++|+.|+.+++++|++...+++||++||+
T Consensus 56 ~~~~Dl~~-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~ 128 (349)
T TIGR02622 56 DHFGDIRD-------AAKLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSD 128 (349)
T ss_pred EEEccCCC-------HHHHHHHHhhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEech
Confidence 88999994 444446665 479999999964322 345667899999999999999886337899999999
Q ss_pred eeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHH
Q 008324 164 YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (570)
Q Consensus 164 ~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~ 243 (570)
.+|+..... .++.|+.+. .+.+.|+.||..+|.+++
T Consensus 129 ~vyg~~~~~---~~~~e~~~~-----------------------------------------~p~~~Y~~sK~~~e~~~~ 164 (349)
T TIGR02622 129 KCYRNDEWV---WGYRETDPL-----------------------------------------GGHDPYSSSKACAELVIA 164 (349)
T ss_pred hhhCCCCCC---CCCccCCCC-----------------------------------------CCCCcchhHHHHHHHHHH
Confidence 998753210 111111111 235789999999999997
Q ss_pred Hhc---------cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHH
Q 008324 244 QSK---------ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (570)
Q Consensus 244 ~~~---------~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~ 314 (570)
.+. .+++++++||+.|||+.... . -.....++..+..|.... .+++++.+|++||||+|++++.
T Consensus 165 ~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~-----~-~~~~~~~~~~~~~g~~~~-~~~g~~~rd~i~v~D~a~a~~~ 237 (349)
T TIGR02622 165 SYRSSFFGVANFHGIKIASARAGNVIGGGDWA-----E-DRLIPDVIRAFSSNKIVI-IRNPDATRPWQHVLEPLSGYLL 237 (349)
T ss_pred HHHHHhhcccccCCCcEEEEccCcccCCCcch-----h-hhhhHHHHHHHhcCCCeE-ECCCCcccceeeHHHHHHHHHH
Confidence 752 28999999999999985411 1 122334555555665544 4678899999999999999998
Q ss_pred HHHHhhCC-CCCCceEEecCCCCCcccHHHHHHHHhhhccc
Q 008324 315 AMVAHAKQ-PSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 315 a~~~~~~~-~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~ 354 (570)
++...... ...+++||++++...+++..++++.+.+.++.
T Consensus 238 ~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~ 278 (349)
T TIGR02622 238 LAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWG 278 (349)
T ss_pred HHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcC
Confidence 87642111 11246999998633689999999999887654
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-27 Score=241.97 Aligned_cols=244 Identities=17% Similarity=0.176 Sum_probs=169.6
Q ss_pred EEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccC
Q 008324 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (570)
Q Consensus 15 VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl 94 (570)
|||||||||||++|+++|++.| .++++++|.......... .+.+|+
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g---~~~v~~~~~~~~~~~~~~-------------------------------~~~~~~ 47 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKG---ITDILVVDNLKDGTKFVN-------------------------------LVDLDI 47 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCC---CceEEEecCCCcchHHHh-------------------------------hhhhhh
Confidence 8999999999999999999988 445666665432111000 112333
Q ss_pred CCCCCCCCchhhHHHHh-----CCccEEEEcCccCCcc-ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecC
Q 008324 95 SSEDLGLKDSNLKEELW-----NELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (570)
Q Consensus 95 ~~~~lgls~~~~~~~l~-----~~vdiViH~AA~v~f~-~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~ 168 (570)
.+.. +.++..+.++ .++|+|||+||..... ......++.|+.||.+++++|++. ++ +|||+||+++|+.
T Consensus 48 ~d~~---~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~-~~i~~SS~~vyg~ 122 (308)
T PRK11150 48 ADYM---DKEDFLAQIMAGDDFGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGG 122 (308)
T ss_pred hhhh---hHHHHHHHHhcccccCCccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEcchHHhCc
Confidence 3210 0122222333 2689999999864321 233456899999999999999996 65 6999999999986
Q ss_pred CCc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--
Q 008324 169 RTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (570)
Q Consensus 169 ~~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~-- 245 (570)
..+ .++|.. +. .+.+.|+.||..+|++++++
T Consensus 123 ~~~~~~~E~~-----~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~~~~ 156 (308)
T PRK11150 123 RTDDFIEERE-----YE-----------------------------------------KPLNVYGYSKFLFDEYVRQILP 156 (308)
T ss_pred CCCCCCccCC-----CC-----------------------------------------CCCCHHHHHHHHHHHHHHHHHH
Confidence 432 222221 11 34578999999999999887
Q ss_pred ccCCcEEEEecCceecCCCCCCCccccCccch-HHHHHHHhcCCceee-ecCCCeeeeeeehHHHHHHHHHHHHHhhCCC
Q 008324 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTI-NTLFVASAQGNLRCL-VGETKVIMDVIPVDMVVNAMIVAMVAHAKQP 323 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~-~~~i~~~~~G~~~~~-~~~~~~~~d~VpVDdva~aii~a~~~~~~~~ 323 (570)
..+++++++||+.|||+...+ .+.+ ... ..++..+.+|....+ .++++..+|++||||+|++++.++... .
T Consensus 157 ~~~~~~~~lR~~~vyG~~~~~-~~~~---~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~---~ 229 (308)
T PRK11150 157 EANSQICGFRYFNVYGPREGH-KGSM---ASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENG---V 229 (308)
T ss_pred HcCCCEEEEeeeeecCCCCCC-CCcc---chhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcC---C
Confidence 358999999999999987633 1111 111 123345566654433 467778999999999999999887521 1
Q ss_pred CCCceEEecCCCCCcccHHHHHHHHhhhccc
Q 008324 324 SDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 324 ~~~~iyni~s~~~~pit~~~l~~~i~~~~~~ 354 (570)
+.+||++++ .++|+.|+++.+.+..+.
T Consensus 230 --~~~yni~~~--~~~s~~el~~~i~~~~~~ 256 (308)
T PRK11150 230 --SGIFNCGTG--RAESFQAVADAVLAYHKK 256 (308)
T ss_pred --CCeEEcCCC--CceeHHHHHHHHHHHhCC
Confidence 359999998 889999999999998874
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.6e-27 Score=244.55 Aligned_cols=258 Identities=18% Similarity=0.229 Sum_probs=182.5
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|||||||||||++|+++|++.|.. .|+.+.|..... ..+.+. .+ .+ ..++.++.+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~--~v~~~~~~~~~~-~~~~~~-~~------------~~-------~~~~~~~~~ 57 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQD--SVVNVDKLTYAG-NLESLA-DV------------SD-------SERYVFEHA 57 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCC--eEEEecCCCccc-hHHHHH-hc------------cc-------CCceEEEEe
Confidence 47999999999999999999998742 244433322111 111111 00 00 145778999
Q ss_pred cCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHc--------cCceEEEE
Q 008324 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKC--------VKLKVFVH 159 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~--------~~l~~~V~ 159 (570)
|+++ .+....+++ ++|+|||+||.+... ...+..+++|+.|+.+++++|++. +++++|||
T Consensus 58 Dl~d-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~ 130 (352)
T PRK10084 58 DICD-------RAELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHH 130 (352)
T ss_pred cCCC-------HHHHHHHHHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEE
Confidence 9994 444445555 489999999976432 345678999999999999999874 24679999
Q ss_pred EecceeecCCCc--cccc-c---cCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 160 VSTAYVAGERTG--LILE-N---PLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 160 vSTa~v~~~~~g--~i~E-~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
+||.++++.... .+.+ . ++.|+.+ ..+.+.|+.
T Consensus 131 ~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~-----------------------------------------~~p~~~Y~~ 169 (352)
T PRK10084 131 ISTDEVYGDLPHPDEVENSEELPLFTETTA-----------------------------------------YAPSSPYSA 169 (352)
T ss_pred ecchhhcCCCCccccccccccCCCccccCC-----------------------------------------CCCCChhHH
Confidence 999999986321 0100 0 0111111 134578999
Q ss_pred HHHHHHHHHHHh--ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHH
Q 008324 234 TKTMGEMLMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (570)
Q Consensus 234 sK~~aE~lv~~~--~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~a 311 (570)
||..+|.++..+ ..+++++++||+.|||+...+ . .....++..+..|....+++++++.+|+|||+|+|++
T Consensus 170 sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~-----~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~a 242 (352)
T PRK10084 170 SKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFP-----E--KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARA 242 (352)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCc-----c--chHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHHHHH
Confidence 999999999876 358999999999999986422 1 1233344555556555677889999999999999999
Q ss_pred HHHHHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhccc
Q 008324 312 MIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~ 354 (570)
++.++.. . ..+++||++++ +++++.++++.+.+.++.
T Consensus 243 ~~~~l~~---~-~~~~~yni~~~--~~~s~~~~~~~i~~~~~~ 279 (352)
T PRK10084 243 LYKVVTE---G-KAGETYNIGGH--NEKKNLDVVLTICDLLDE 279 (352)
T ss_pred HHHHHhc---C-CCCceEEeCCC--CcCcHHHHHHHHHHHhcc
Confidence 9988752 1 12679999998 889999999999998875
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=239.23 Aligned_cols=257 Identities=22% Similarity=0.316 Sum_probs=186.4
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
+|||||||||||++|+++|++.+++ .+|+++.|...... .+++. .+ . ..+++.++.+|
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~-~~v~~~~~~~~~~~-~~~~~-~~---------~----------~~~~~~~~~~D 58 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPD-AEVIVLDKLTYAGN-LENLA-DL---------E----------DNPRYRFVKGD 58 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCC-CEEEEecCCCcchh-hhhhh-hh---------c----------cCCCcEEEEcC
Confidence 5899999999999999999998743 36777766432111 11111 00 0 01467889999
Q ss_pred CCCCCCCCCchhhHHHHhCC--ccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecC
Q 008324 94 ISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (570)
Q Consensus 94 l~~~~lgls~~~~~~~l~~~--vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~ 168 (570)
++ +.+....++++ +|+|||+||....+ +..+..+++|+.|+.+++++|++...-.++||+||..++|.
T Consensus 59 l~-------~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~ 131 (317)
T TIGR01181 59 IG-------DRELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGD 131 (317)
T ss_pred Cc-------CHHHHHHHHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCC
Confidence 99 44445566766 89999999976532 34567789999999999999988522237999999999986
Q ss_pred CCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--c
Q 008324 169 RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--K 246 (570)
Q Consensus 169 ~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~ 246 (570)
.... .+++++.+. .+.+.|+.+|..+|.++..+ .
T Consensus 132 ~~~~---~~~~e~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~~~~~ 167 (317)
T TIGR01181 132 LEKG---DAFTETTPL-----------------------------------------APSSPYSASKAASDHLVRAYHRT 167 (317)
T ss_pred CCCC---CCcCCCCCC-----------------------------------------CCCCchHHHHHHHHHHHHHHHHH
Confidence 4320 112221111 23468999999999999876 4
Q ss_pred cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCC
Q 008324 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~ 326 (570)
.+++++++||+.|||+...+ + .....++..+..|....++++++..+++||+||+|+++..++... ..+
T Consensus 168 ~~~~~~i~R~~~i~G~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~----~~~ 236 (317)
T TIGR01181 168 YGLPALITRCSNNYGPYQFP-----E--KLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKG----RVG 236 (317)
T ss_pred hCCCeEEEEeccccCCCCCc-----c--cHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCC----CCC
Confidence 58999999999999986532 1 123345556666665566788889999999999999998887521 225
Q ss_pred ceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 327 NIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 327 ~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
++||++++ .++++.|+++.+.+.++..+
T Consensus 237 ~~~~~~~~--~~~s~~~~~~~i~~~~~~~~ 264 (317)
T TIGR01181 237 ETYNIGGG--NERTNLEVVETILELLGKDE 264 (317)
T ss_pred ceEEeCCC--CceeHHHHHHHHHHHhCCCc
Confidence 79999998 88999999999999988643
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.3e-27 Score=243.92 Aligned_cols=261 Identities=16% Similarity=0.177 Sum_probs=185.2
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|++.| .+|+++.|+..... .+++. .+ .+..+ .....++.++.+
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G---~~V~~~~r~~~~~~-~~~~~-~~---------~~~~~----~~~~~~~~~~~~ 62 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKG---YEVHGLIRRSSSFN-TQRIE-HI---------YEDPH----NVNKARMKLHYG 62 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCC---CEEEEEecCCcccc-hhhhh-hh---------hhccc----cccccceeEEEe
Confidence 689999999999999999999998 67888888754211 11211 00 00000 000246889999
Q ss_pred cCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCc---eEEEEEecce
Q 008324 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKL---KVFVHVSTAY 164 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l---~~~V~vSTa~ 164 (570)
|++ +.+....+++ ++|+|||+||..... +.....+++|+.||.+++++|++. ++ ++|||+||..
T Consensus 63 Dl~-------d~~~l~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~-~~~~~~~~v~~SS~~ 134 (343)
T TIGR01472 63 DLT-------DSSNLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTL-GLIKSVKFYQASTSE 134 (343)
T ss_pred ccC-------CHHHHHHHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHh-CCCcCeeEEEeccHH
Confidence 999 4554556666 479999999975432 334556788999999999999986 44 4899999999
Q ss_pred eecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHH
Q 008324 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (570)
Q Consensus 165 v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~ 244 (570)
+||.... .+..|+.+. .+.+.|+.||..+|.++..
T Consensus 135 vyg~~~~----~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~e~~~~~ 169 (343)
T TIGR01472 135 LYGKVQE----IPQNETTPF-----------------------------------------YPRSPYAAAKLYAHWITVN 169 (343)
T ss_pred hhCCCCC----CCCCCCCCC-----------------------------------------CCCChhHHHHHHHHHHHHH
Confidence 9986421 112221211 2357899999999999987
Q ss_pred h--ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCC-ceeeecCCCeeeeeeehHHHHHHHHHHHHHhhC
Q 008324 245 S--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGN-LRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAK 321 (570)
Q Consensus 245 ~--~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~-~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~ 321 (570)
+ ..++++++.|+..++|+.... .... .....++..+..|. ...+.+++++.+|++||||+|++++.++...
T Consensus 170 ~~~~~~~~~~~~~~~~~~gp~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~~-- 243 (343)
T TIGR01472 170 YREAYGLFAVNGILFNHESPRRGE--NFVT--RKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQD-- 243 (343)
T ss_pred HHHHhCCceEEEeecccCCCCCCc--cccc--hHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHHhcC--
Confidence 7 347899999999999975311 1111 12223344455564 3456688999999999999999999888521
Q ss_pred CCCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 322 QPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 322 ~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
. ..+||++++ .++|+.|+++.+.+.++..
T Consensus 244 ~---~~~yni~~g--~~~s~~e~~~~i~~~~g~~ 272 (343)
T TIGR01472 244 K---PDDYVIATG--ETHSVREFVEVSFEYIGKT 272 (343)
T ss_pred C---CccEEecCC--CceeHHHHHHHHHHHcCCC
Confidence 1 358999999 8999999999999988853
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-26 Score=243.22 Aligned_cols=266 Identities=16% Similarity=0.171 Sum_probs=174.8
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
..|+|||||||||||++|+++|++.| .+|++++|+.........+. ..+. ...++.++
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~--------------~~~~-----~~~~~~~v 61 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERG---YTVRATVRDPANVKKVKHLL--------------DLPG-----ATTRLTLW 61 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCC---CEEEEEEcCcchhHHHHHHH--------------hccC-----CCCceEEE
Confidence 35799999999999999999999998 67888888753321111100 0000 01368899
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc--ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecC
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD--ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~--~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~ 168 (570)
.+|+++ .+..+.+++++|+|||+||..... ++....+++|+.||.+++++|.+..++++|||+||+.+++.
T Consensus 62 ~~Dl~d-------~~~~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~ 134 (351)
T PLN02650 62 KADLAV-------EGSFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNV 134 (351)
T ss_pred EecCCC-------hhhHHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhccc
Confidence 999994 444557778899999999976432 33446789999999999999998644789999999977654
Q ss_pred CCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--c
Q 008324 169 RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--K 246 (570)
Q Consensus 169 ~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~ 246 (570)
..+. ...++|..+.+.+.. + ....+.+.|+.||..+|.+++.+ .
T Consensus 135 ~~~~--~~~~~E~~~~~~~~~-------------------------------~-~~~~~~~~Y~~sK~~~E~~~~~~~~~ 180 (351)
T PLN02650 135 EEHQ--KPVYDEDCWSDLDFC-------------------------------R-RKKMTGWMYFVSKTLAEKAAWKYAAE 180 (351)
T ss_pred CCCC--CCccCcccCCchhhh-------------------------------h-ccccccchHHHHHHHHHHHHHHHHHH
Confidence 2210 001221111110000 0 00012358999999999999887 4
Q ss_pred cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCC
Q 008324 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~ 326 (570)
.+++++++||++|||+...+. .. ......+ ....|.... .+.. ..+|+|||+|+|++++.++... .. +
T Consensus 181 ~gi~~~ilRp~~v~Gp~~~~~---~~--~~~~~~~-~~~~~~~~~-~~~~-~~r~~v~V~Dva~a~~~~l~~~--~~--~ 248 (351)
T PLN02650 181 NGLDFISIIPTLVVGPFISTS---MP--PSLITAL-SLITGNEAH-YSII-KQGQFVHLDDLCNAHIFLFEHP--AA--E 248 (351)
T ss_pred cCCeEEEECCCceECCCCCCC---CC--ccHHHHH-HHhcCCccc-cCcC-CCcceeeHHHHHHHHHHHhcCc--Cc--C
Confidence 589999999999999876431 00 1111111 112232211 2222 3479999999999999988532 11 3
Q ss_pred ceEEecCCCCCcccHHHHHHHHhhhccc
Q 008324 327 NIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 327 ~iyni~s~~~~pit~~~l~~~i~~~~~~ 354 (570)
.+|+ +++ .++++.++++.+.+.++.
T Consensus 249 ~~~i-~~~--~~~s~~el~~~i~~~~~~ 273 (351)
T PLN02650 249 GRYI-CSS--HDATIHDLAKMLREKYPE 273 (351)
T ss_pred ceEE-ecC--CCcCHHHHHHHHHHhCcc
Confidence 4784 555 679999999999987653
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-27 Score=227.34 Aligned_cols=258 Identities=24% Similarity=0.304 Sum_probs=195.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
|..+.|+||||.||||++.+..+....|+.+.|.+.-=.-.+. ..- |.+.. ..++..+
T Consensus 4 ~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~--~~~-------------l~~~~-------n~p~ykf 61 (331)
T KOG0747|consen 4 YKEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN--LKN-------------LEPVR-------NSPNYKF 61 (331)
T ss_pred CccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc--cch-------------hhhhc-------cCCCceE
Confidence 4558999999999999999999999888866555432111111 111 11110 1367789
Q ss_pred EeccCCCCCCCCCchhhHHHHh--CCccEEEEcCccCCc----cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecc
Q 008324 90 VPGDISSEDLGLKDSNLKEELW--NELDIMVNSAAITKF----DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~--~~vdiViH~AA~v~f----~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa 163 (570)
+.+|+.+ +.....++ +++|.|+|+||..+. .+++. ....|+.+|..|++.++..+++++|||+||.
T Consensus 62 v~~di~~-------~~~~~~~~~~~~id~vihfaa~t~vd~s~~~~~~-~~~nnil~t~~Lle~~~~sg~i~~fvhvSTd 133 (331)
T KOG0747|consen 62 VEGDIAD-------ADLVLYLFETEEIDTVIHFAAQTHVDRSFGDSFE-FTKNNILSTHVLLEAVRVSGNIRRFVHVSTD 133 (331)
T ss_pred eeccccc-------hHHHHhhhccCchhhhhhhHhhhhhhhhcCchHH-HhcCCchhhhhHHHHHHhccCeeEEEEeccc
Confidence 9999994 33332333 469999999998754 34443 4788999999999999999999999999999
Q ss_pred eeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHH
Q 008324 164 YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (570)
Q Consensus 164 ~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~ 243 (570)
.|||+..+.-.+. |.+ +..+.|+|+.||+.||++++
T Consensus 134 eVYGds~~~~~~~---E~s-----------------------------------------~~nPtnpyAasKaAaE~~v~ 169 (331)
T KOG0747|consen 134 EVYGDSDEDAVVG---EAS-----------------------------------------LLNPTNPYAASKAAAEMLVR 169 (331)
T ss_pred ceecCcccccccc---ccc-----------------------------------------cCCCCCchHHHHHHHHHHHH
Confidence 9999865311000 101 11567999999999999999
Q ss_pred Hh--ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhC
Q 008324 244 QS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAK 321 (570)
Q Consensus 244 ~~--~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~ 321 (570)
++ ..++|++++|-++||||.+-|. ..+..++.....|..-.++|++...++++||+|+++|+-+++.. .
T Consensus 170 Sy~~sy~lpvv~~R~nnVYGP~q~~~-------klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~K--g 240 (331)
T KOG0747|consen 170 SYGRSYGLPVVTTRMNNVYGPNQYPE-------KLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEK--G 240 (331)
T ss_pred HHhhccCCcEEEEeccCccCCCcChH-------HHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhc--C
Confidence 98 5689999999999999988542 33345556566677778999999999999999999999988863 2
Q ss_pred CCCCCceEEecCCCCCcccHHHHHHHHhhhccc
Q 008324 322 QPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 322 ~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~ 354 (570)
. -++|||+++. .+.+..|+++.+.+.+.+
T Consensus 241 ~--~geIYNIgtd--~e~~~~~l~k~i~eli~~ 269 (331)
T KOG0747|consen 241 E--LGEIYNIGTD--DEMRVIDLAKDICELFEK 269 (331)
T ss_pred C--ccceeeccCc--chhhHHHHHHHHHHHHHH
Confidence 2 2789999998 899999999999988875
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-26 Score=227.37 Aligned_cols=228 Identities=25% Similarity=0.416 Sum_probs=176.6
Q ss_pred EEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccC
Q 008324 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (570)
Q Consensus 15 VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl 94 (570)
|||||||||||++|+++|++++ ..|+.+.|++........ ..++.++.+|+
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g---~~v~~~~~~~~~~~~~~~--------------------------~~~~~~~~~dl 51 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKG---HEVIVLSRSSNSESFEEK--------------------------KLNVEFVIGDL 51 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT---TEEEEEESCSTGGHHHHH--------------------------HTTEEEEESET
T ss_pred EEEEccCCHHHHHHHHHHHHcC---Cccccccccccccccccc--------------------------cceEEEEEeec
Confidence 7999999999999999999999 567788888765532211 13788999999
Q ss_pred CCCCCCCCchhhHHHHhCC--ccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCC
Q 008324 95 SSEDLGLKDSNLKEELWNE--LDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 95 ~~~~lgls~~~~~~~l~~~--vdiViH~AA~v~f---~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~ 169 (570)
. +.+..+.++++ +|+|||+||.... .......++.|+.++.+++++|++. ++++||++||+.+|+..
T Consensus 52 ~-------~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~sS~~~y~~~ 123 (236)
T PF01370_consen 52 T-------DKEQLEKLLEKANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREA-GVKRFIFLSSASVYGDP 123 (236)
T ss_dssp T-------SHHHHHHHHHHHTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TTSEEEEEEEGGGGTSS
T ss_pred c-------ccccccccccccCceEEEEeeccccccccccccccccccccccccccccccccc-ccccccccccccccccc
Confidence 9 55555677765 5999999998631 1455677899999999999999997 77999999999999876
Q ss_pred Cc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--c
Q 008324 170 TG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--K 246 (570)
Q Consensus 170 ~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~ 246 (570)
.+ .++|. .+. .+.+.|+.+|..+|++++++ .
T Consensus 124 ~~~~~~e~-----~~~-----------------------------------------~~~~~Y~~~K~~~e~~~~~~~~~ 157 (236)
T PF01370_consen 124 DGEPIDED-----SPI-----------------------------------------NPLSPYGASKRAAEELLRDYAKK 157 (236)
T ss_dssp SSSSBETT-----SGC-----------------------------------------CHSSHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccc-----ccc-----------------------------------------ccccccccccccccccccccccc
Confidence 21 22332 111 22467999999999999987 3
Q ss_pred cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCC
Q 008324 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~ 326 (570)
.+++++++||+.|||+. .+.. ........++..+.+|....++++++..++++||+|+|++++.++.... ..+
T Consensus 158 ~~~~~~~~R~~~vyG~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~ 230 (236)
T PF01370_consen 158 YGLRVTILRPPNVYGPG-NPNN---NSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPK---AAG 230 (236)
T ss_dssp HTSEEEEEEESEEESTT-SSSS---STSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSC---TTT
T ss_pred ccccccccccccccccc-cccc---ccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCC---CCC
Confidence 48999999999999997 1111 1113344577778888877888999999999999999999999997433 237
Q ss_pred ceEEec
Q 008324 327 NIYHVG 332 (570)
Q Consensus 327 ~iyni~ 332 (570)
++||++
T Consensus 231 ~~yNig 236 (236)
T PF01370_consen 231 GIYNIG 236 (236)
T ss_dssp EEEEES
T ss_pred CEEEeC
Confidence 899985
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-26 Score=235.23 Aligned_cols=249 Identities=22% Similarity=0.276 Sum_probs=188.5
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
+|||||||||||++|+++|++.| ++|+.+.|........ ...+..+.+|
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g---~~V~~~~r~~~~~~~~----------------------------~~~~~~~~~d 50 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAG---HDVRGLDRLRDGLDPL----------------------------LSGVEFVVLD 50 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCC---CeEEEEeCCCcccccc----------------------------ccccceeeec
Confidence 59999999999999999999988 6778898876543210 0356788999
Q ss_pred CCCCCCCCCchhhHHHHhCCc-cEEEEcCccCCcccc----HHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecC
Q 008324 94 ISSEDLGLKDSNLKEELWNEL-DIMVNSAAITKFDER----YDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (570)
Q Consensus 94 l~~~~lgls~~~~~~~l~~~v-diViH~AA~v~f~~~----~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~ 168 (570)
+++ .+....+.+.+ |+|||+||....... .....++|+.||.+++++|++ .++++|||.||.++++.
T Consensus 51 ~~~-------~~~~~~~~~~~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~-~~~~~~v~~ss~~~~~~ 122 (314)
T COG0451 51 LTD-------RDLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARA-AGVKRFVFASSVSVVYG 122 (314)
T ss_pred ccc-------hHHHHHHHhcCCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEeCCCceECC
Confidence 984 34445666777 999999998765433 345789999999999999999 49999999888887775
Q ss_pred C-Cc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhc
Q 008324 169 R-TG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSK 246 (570)
Q Consensus 169 ~-~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~ 246 (570)
. .+ .++|+. .+. .+.+.|+.||.++|+.+.++.
T Consensus 123 ~~~~~~~~E~~----~~~-----------------------------------------~p~~~Yg~sK~~~E~~~~~~~ 157 (314)
T COG0451 123 DPPPLPIDEDL----GPP-----------------------------------------RPLNPYGVSKLAAEQLLRAYA 157 (314)
T ss_pred CCCCCCccccc----CCC-----------------------------------------CCCCHHHHHHHHHHHHHHHHH
Confidence 3 11 233321 000 223479999999999999884
Q ss_pred --cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCc-eeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCC
Q 008324 247 --ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNL-RCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQP 323 (570)
Q Consensus 247 --~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~-~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~ 323 (570)
.+++++|+||+.|||+...+. +.. .....++....+|.. ..+.+++...+++++|||+|.+++.++....
T Consensus 158 ~~~~~~~~ilR~~~vyGp~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--- 230 (314)
T COG0451 158 RLYGLPVVILRPFNVYGPGDKPD--LSS--GVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPD--- 230 (314)
T ss_pred HHhCCCeEEEeeeeeeCCCCCCC--CCc--CcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCC---
Confidence 489999999999999987542 111 122334545666664 6677788888999999999999999986221
Q ss_pred CCCceEEecCCCCC-cccHHHHHHHHhhhcccCCC
Q 008324 324 SDANIYHVGSSLRN-PVTLVSILDYGFVYFTKKPW 357 (570)
Q Consensus 324 ~~~~iyni~s~~~~-pit~~~l~~~i~~~~~~~p~ 357 (570)
.. +||++++ . +++..++++.+.+.++..+.
T Consensus 231 -~~-~~ni~~~--~~~~~~~e~~~~~~~~~~~~~~ 261 (314)
T COG0451 231 -GG-VFNIGSG--TAEITVRELAEAVAEAVGSKAP 261 (314)
T ss_pred -Cc-EEEeCCC--CCcEEHHHHHHHHHHHhCCCCc
Confidence 13 9999998 5 89999999999999887644
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-26 Score=234.91 Aligned_cols=259 Identities=20% Similarity=0.305 Sum_probs=198.6
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++.+++||||+||+|++|+++|++.++ ..+|.++.............. .+...++.++
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~-~~~irv~D~~~~~~~~~~e~~---------------------~~~~~~v~~~ 60 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENEL-KLEIRVVDKTPTQSNLPAELT---------------------GFRSGRVTVI 60 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhccc-ccEEEEeccCccccccchhhh---------------------cccCCceeEE
Confidence 467999999999999999999999885 356666665443111111100 0014789999
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCC--ccc-cHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeec
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK--FDE-RYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~--f~~-~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~ 167 (570)
.+|+. +.......+.++ .|+||||... +.. ..+...++||.||+++++.|++. +++++||+||++|..
T Consensus 61 ~~D~~-------~~~~i~~a~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~-~v~~lIYtSs~~Vvf 131 (361)
T KOG1430|consen 61 LGDLL-------DANSISNAFQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKEL-GVKRLIYTSSAYVVF 131 (361)
T ss_pred ecchh-------hhhhhhhhccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHh-CCCEEEEecCceEEe
Confidence 99999 455556777888 8888888653 434 36778899999999999999998 999999999999987
Q ss_pred CCCccc--ccc-cCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHH
Q 008324 168 ERTGLI--LEN-PLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (570)
Q Consensus 168 ~~~g~i--~E~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~ 244 (570)
.....+ +|. +|| ..+.+.|+.||+.||+++.+
T Consensus 132 ~g~~~~n~~E~~p~p---------------------------------------------~~~~d~Y~~sKa~aE~~Vl~ 166 (361)
T KOG1430|consen 132 GGEPIINGDESLPYP---------------------------------------------LKHIDPYGESKALAEKLVLE 166 (361)
T ss_pred CCeecccCCCCCCCc---------------------------------------------cccccccchHHHHHHHHHHH
Confidence 643211 111 111 14568899999999999998
Q ss_pred hc--cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhh-C
Q 008324 245 SK--ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHA-K 321 (570)
Q Consensus 245 ~~--~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~-~ 321 (570)
.. .++.++++||++|||+.+. .....++..+..|......++++...|+++++.|+-|++.|..... .
T Consensus 167 an~~~~l~T~aLR~~~IYGpgd~---------~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~ 237 (361)
T KOG1430|consen 167 ANGSDDLYTCALRPPGIYGPGDK---------RLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDK 237 (361)
T ss_pred hcCCCCeeEEEEccccccCCCCc---------cccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhc
Confidence 74 5699999999999999762 3344667777888888888999999999999999999998887543 2
Q ss_pred -CCCCCceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 322 -QPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 322 -~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
....|++|+|+++ +|+...+++..+.+.+|..+
T Consensus 238 ~~~~~Gq~yfI~d~--~p~~~~~~~~~l~~~lg~~~ 271 (361)
T KOG1430|consen 238 SPSVNGQFYFITDD--TPVRFFDFLSPLVKALGYCL 271 (361)
T ss_pred CCccCceEEEEeCC--CcchhhHHHHHHHHhcCCCC
Confidence 2335899999999 89988888888888888664
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-26 Score=235.59 Aligned_cols=228 Identities=23% Similarity=0.184 Sum_probs=165.0
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|++.| + |+++.|.. ..+.+
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~---V~~~~~~~--------------------------------------~~~~~ 38 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-N---LIALDVHS--------------------------------------TDYCG 38 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-C---EEEecccc--------------------------------------ccccC
Confidence 579999999999999999999876 3 56666531 02468
Q ss_pred cCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeec
Q 008324 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~ 167 (570)
|++ +.+..+.+++ ++|+||||||....+ ...+.+.++|+.|+.+++++|++. +. +|||+||.+||+
T Consensus 39 Dl~-------d~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~-g~-~~v~~Ss~~Vy~ 109 (299)
T PRK09987 39 DFS-------NPEGVAETVRKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEV-GA-WVVHYSTDYVFP 109 (299)
T ss_pred CCC-------CHHHHHHHHHhcCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEccceEEC
Confidence 998 4444556665 589999999987543 345667899999999999999997 54 799999999998
Q ss_pred CCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcc
Q 008324 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE 247 (570)
Q Consensus 168 ~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~ 247 (570)
...+ .+++|+++. .+.|.|+.||..+|+++..+.
T Consensus 110 ~~~~----~p~~E~~~~-----------------------------------------~P~~~Yg~sK~~~E~~~~~~~- 143 (299)
T PRK09987 110 GTGD----IPWQETDAT-----------------------------------------APLNVYGETKLAGEKALQEHC- 143 (299)
T ss_pred CCCC----CCcCCCCCC-----------------------------------------CCCCHHHHHHHHHHHHHHHhC-
Confidence 6432 234332221 345789999999999998753
Q ss_pred CCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecC--CCeeeeeeehHHHHHHHHHHHHHhhCCCCC
Q 008324 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGE--TKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (570)
Q Consensus 248 ~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~--~~~~~d~VpVDdva~aii~a~~~~~~~~~~ 325 (570)
.+.+|+||++|||+... +....++..+..|....+.++ +....+...+|+++.++..++.. .. .
T Consensus 144 -~~~~ilR~~~vyGp~~~---------~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~--~~--~ 209 (299)
T PRK09987 144 -AKHLIFRTSWVYAGKGN---------NFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNK--PE--V 209 (299)
T ss_pred -CCEEEEecceecCCCCC---------CHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhcc--CC--C
Confidence 36799999999997531 123344444555655566666 44444555677788877766531 11 1
Q ss_pred CceEEecCCCCCcccHHHHHHHHhhhcc
Q 008324 326 ANIYHVGSSLRNPVTLVSILDYGFVYFT 353 (570)
Q Consensus 326 ~~iyni~s~~~~pit~~~l~~~i~~~~~ 353 (570)
..+||++++ +++|+.|+++.+.+..+
T Consensus 210 ~giyni~~~--~~~s~~e~~~~i~~~~~ 235 (299)
T PRK09987 210 AGLYHLVAS--GTTTWHDYAALVFEEAR 235 (299)
T ss_pred CCeEEeeCC--CCccHHHHHHHHHHHHH
Confidence 359999998 88999999999877644
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-25 Score=234.54 Aligned_cols=269 Identities=19% Similarity=0.210 Sum_probs=187.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCccc-HHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS-AALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~-~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+++|+|+|||||||||++|+++|++.+ .+|+++.|...... ..+++. .... ....++.
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~~~~~~~~~~~~~~~-------------~~~~-----~~~~~~~ 61 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLLLAG---YKVVVIDNLDNSSEEALRRVK-------------ELAG-----DLGDNLV 61 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCCcchHHHHHHHH-------------Hhhc-----ccCccce
Confidence 568999999999999999999999988 57788877543221 111211 0000 0124678
Q ss_pred EEeccCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecc
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa 163 (570)
++.+|+++ .+....+++ ++|+|||+||..... +.....+++|+.|+.+++++|++. ++++||++||+
T Consensus 62 ~~~~D~~~-------~~~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~ 133 (352)
T PLN02240 62 FHKVDLRD-------KEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH-GCKKLVFSSSA 133 (352)
T ss_pred EEecCcCC-------HHHHHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccH
Confidence 89999994 444445554 689999999975432 345667999999999999999986 78899999999
Q ss_pred eeecCCCc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHH
Q 008324 164 YVAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (570)
Q Consensus 164 ~v~~~~~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv 242 (570)
.+|+...+ .++|+ .+. .+.+.|+.||..+|+++
T Consensus 134 ~vyg~~~~~~~~E~-----~~~-----------------------------------------~~~~~Y~~sK~~~e~~~ 167 (352)
T PLN02240 134 TVYGQPEEVPCTEE-----FPL-----------------------------------------SATNPYGRTKLFIEEIC 167 (352)
T ss_pred HHhCCCCCCCCCCC-----CCC-----------------------------------------CCCCHHHHHHHHHHHHH
Confidence 88875322 22222 221 23578999999999999
Q ss_pred HHh---ccCCcEEEEecCceecCCCCCCCcccc-C-ccchHHHHHHHhcCCce--eeec------CCCeeeeeeehHHHH
Q 008324 243 QQS---KENLSLVIIRPTVVSGTYKEPFPGWVE-D-LKTINTLFVASAQGNLR--CLVG------ETKVIMDVIPVDMVV 309 (570)
Q Consensus 243 ~~~---~~~lp~~IvRPsiV~g~~~ep~~gw~~-~-~~~~~~~i~~~~~G~~~--~~~~------~~~~~~d~VpVDdva 309 (570)
+.+ ..+++++++|++.|||+.....-|... . ......++..+..|... .+.+ ++.+.+++|+|+|+|
T Consensus 168 ~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a 247 (352)
T PLN02240 168 RDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHVMDLA 247 (352)
T ss_pred HHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEHHHHH
Confidence 865 246899999999999975421111110 0 11222344444444322 2333 678899999999999
Q ss_pred HHHHHHHHHhhC-CCCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 310 NAMIVAMVAHAK-QPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 310 ~aii~a~~~~~~-~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
++++.++..... ....+++||++++ +++|+.|+++.+.+.++..
T Consensus 248 ~a~~~a~~~~~~~~~~~~~~yni~~~--~~~s~~el~~~i~~~~g~~ 292 (352)
T PLN02240 248 DGHIAALRKLFTDPDIGCEAYNLGTG--KGTSVLEMVAAFEKASGKK 292 (352)
T ss_pred HHHHHHHhhhhhccCCCCceEEccCC--CcEeHHHHHHHHHHHhCCC
Confidence 999988863211 1122579999998 8999999999999998754
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-26 Score=237.44 Aligned_cols=260 Identities=15% Similarity=0.120 Sum_probs=184.0
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+||+|||||||||||++|+++|++.| .+|+++.|+...... ++++ . +..+. .....++.++
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G---~~V~~~~r~~~~~~~-~~~~-~---------~~~~~-----~~~~~~~~~~ 65 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKG---YEVHGIIRRSSNFNT-QRLD-H---------IYIDP-----HPNKARMKLH 65 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCC---CEEEEEecccccccc-cchh-h---------hcccc-----ccccCceEEE
Confidence 57999999999999999999999988 678888886532110 1111 0 00000 0002468899
Q ss_pred eccCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHHccCce-----EEEEE
Q 008324 91 PGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLK-----VFVHV 160 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f---~~~~~~~~~~Nv~gt~~ll~la~~~~~l~-----~~V~v 160 (570)
.+|++ +.+....+++ ++|+|||+||.... .+.....+++|+.||.+++++|++. +++ +||++
T Consensus 66 ~~Dl~-------d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~~~~~~v~~ 137 (340)
T PLN02653 66 YGDLS-------DASSLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLH-GQETGRQIKYYQA 137 (340)
T ss_pred EecCC-------CHHHHHHHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHh-ccccccceeEEEe
Confidence 99999 4444445555 47999999997543 2344566799999999999999986 543 89999
Q ss_pred ecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHH
Q 008324 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (570)
Q Consensus 161 STa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~ 240 (570)
||..+||.....++|. .+. .+.+.|+.||..+|.
T Consensus 138 Ss~~vyg~~~~~~~E~-----~~~-----------------------------------------~p~~~Y~~sK~~~e~ 171 (340)
T PLN02653 138 GSSEMYGSTPPPQSET-----TPF-----------------------------------------HPRSPYAVAKVAAHW 171 (340)
T ss_pred ccHHHhCCCCCCCCCC-----CCC-----------------------------------------CCCChhHHHHHHHHH
Confidence 9999998754222222 221 235789999999999
Q ss_pred HHHHh--ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCc-eeeecCCCeeeeeeehHHHHHHHHHHHH
Q 008324 241 LMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNL-RCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (570)
Q Consensus 241 lv~~~--~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~-~~~~~~~~~~~d~VpVDdva~aii~a~~ 317 (570)
++..+ ..+++++..|+..+||+...+ .++. .....++..+..|.. ..+.+++++.+|++||+|+|++++.++.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~gp~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~ 247 (340)
T PLN02653 172 YTVNYREAYGLFACNGILFNHESPRRGE--NFVT--RKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQ 247 (340)
T ss_pred HHHHHHHHcCCeEEEeeeccccCCCCCc--ccch--hHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHHHHh
Confidence 99877 347888889999999875321 1110 111122223345543 3455889999999999999999999886
Q ss_pred HhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhccc
Q 008324 318 AHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 318 ~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~ 354 (570)
.. . +.+||++++ +++++.|+++.+.+..+.
T Consensus 248 ~~---~--~~~yni~~g--~~~s~~e~~~~i~~~~g~ 277 (340)
T PLN02653 248 QE---K--PDDYVVATE--ESHTVEEFLEEAFGYVGL 277 (340)
T ss_pred cC---C--CCcEEecCC--CceeHHHHHHHHHHHcCC
Confidence 21 1 358999999 899999999999998875
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-26 Score=223.78 Aligned_cols=253 Identities=16% Similarity=0.215 Sum_probs=195.5
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+++|+||||.||||+||+++|+..| +.|+++.--..+... ++. ..+-.+.++.+
T Consensus 26 ~~lrI~itGgaGFIgSHLvdkLm~eg---h~VIa~Dn~ftg~k~------n~~----------------~~~~~~~fel~ 80 (350)
T KOG1429|consen 26 QNLRILITGGAGFIGSHLVDKLMTEG---HEVIALDNYFTGRKE------NLE----------------HWIGHPNFELI 80 (350)
T ss_pred CCcEEEEecCcchHHHHHHHHHHhcC---CeEEEEecccccchh------hcc----------------hhccCcceeEE
Confidence 45899999999999999999999998 566666543322110 000 01113556677
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccC---CccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeec
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAIT---KFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v---~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~ 167 (570)
.-|+. ..++.+||-|||+||.. .+..+.-..+.+|+.||.+++.+|++. + ++|+|.||+.|||
T Consensus 81 ~hdv~------------~pl~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv-~-aR~l~aSTseVYg 146 (350)
T KOG1429|consen 81 RHDVV------------EPLLKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRV-G-ARFLLASTSEVYG 146 (350)
T ss_pred Eeech------------hHHHHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHh-C-ceEEEeecccccC
Confidence 77776 24667899999999975 455566667899999999999999996 4 8999999999999
Q ss_pred CCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--
Q 008324 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (570)
Q Consensus 168 ~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~-- 245 (570)
+.. +.+.+++.+.+... .++...|...|..+|.++..|
T Consensus 147 dp~----~hpq~e~ywg~vnp------------------------------------igpr~cydegKr~aE~L~~~y~k 186 (350)
T KOG1429|consen 147 DPL----VHPQVETYWGNVNP------------------------------------IGPRSCYDEGKRVAETLCYAYHK 186 (350)
T ss_pred Ccc----cCCCccccccccCc------------------------------------CCchhhhhHHHHHHHHHHHHhhc
Confidence 843 33334334433211 155678999999999999988
Q ss_pred ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCC
Q 008324 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~ 325 (570)
..++.+.|.|+.++|||.. .|.++ .-+..++.+..++...++++++.+.+.|.+|+|++++++.+++....
T Consensus 187 ~~giE~rIaRifNtyGPrm----~~~dg-rvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~---- 257 (350)
T KOG1429|consen 187 QEGIEVRIARIFNTYGPRM----HMDDG-RVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYR---- 257 (350)
T ss_pred ccCcEEEEEeeecccCCcc----ccCCC-hhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCc----
Confidence 5689999999999999765 45553 55566788889999999999999999999999999999999863322
Q ss_pred CceEEecCCCCCcccHHHHHHHHhhhccc
Q 008324 326 ANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 326 ~~iyni~s~~~~pit~~~l~~~i~~~~~~ 354 (570)
.-+|++++ +.+|+.|+++++.+..+.
T Consensus 258 -~pvNiGnp--~e~Tm~elAemv~~~~~~ 283 (350)
T KOG1429|consen 258 -GPVNIGNP--GEFTMLELAEMVKELIGP 283 (350)
T ss_pred -CCcccCCc--cceeHHHHHHHHHHHcCC
Confidence 23999999 899999999999998854
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-25 Score=230.84 Aligned_cols=248 Identities=15% Similarity=0.172 Sum_probs=176.8
Q ss_pred EEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccC
Q 008324 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (570)
Q Consensus 15 VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl 94 (570)
|||||||||||++++++|++.++ ..|+++.|+.... ++. ++ .. ..+.+|+
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~--~~v~~~~~~~~~~----~~~-~~----------------------~~-~~~~~d~ 50 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGI--TDILVVDNLRDGH----KFL-NL----------------------AD-LVIADYI 50 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCC--ceEEEEecCCCch----hhh-hh----------------------hh-eeeeccC
Confidence 69999999999999999999884 2577776654322 111 00 11 2456777
Q ss_pred CCCCCCCCchhhHHHHh----CCccEEEEcCccCCcc-ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCC
Q 008324 95 SSEDLGLKDSNLKEELW----NELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 95 ~~~~lgls~~~~~~~l~----~~vdiViH~AA~v~f~-~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~ 169 (570)
. +.+..+.+. .++|+|||+||..... .+....+++|+.|+.+++++|++. ++ +|||+||+++|+..
T Consensus 51 ~-------~~~~~~~~~~~~~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~-~~v~~SS~~vy~~~ 121 (314)
T TIGR02197 51 D-------KEDFLDRLEKGAFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEK-GI-PFIYASSAATYGDG 121 (314)
T ss_pred c-------chhHHHHHHhhccCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHh-CC-cEEEEccHHhcCCC
Confidence 7 344444444 4799999999975432 345667899999999999999986 55 79999999999864
Q ss_pred CcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh----
Q 008324 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS---- 245 (570)
Q Consensus 170 ~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~---- 245 (570)
.+...|+.. + ..+.+.|+.||..+|.+++++
T Consensus 122 ~~~~~e~~~----~-----------------------------------------~~p~~~Y~~sK~~~e~~~~~~~~~~ 156 (314)
T TIGR02197 122 EAGFREGRE----L-----------------------------------------ERPLNVYGYSKFLFDQYVRRRVLPE 156 (314)
T ss_pred CCCcccccC----c-----------------------------------------CCCCCHHHHHHHHHHHHHHHHhHhh
Confidence 322222110 0 024578999999999999864
Q ss_pred ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeee------cCCCeeeeeeehHHHHHHHHHHHHHh
Q 008324 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLV------GETKVIMDVIPVDMVVNAMIVAMVAH 319 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~------~~~~~~~d~VpVDdva~aii~a~~~~ 319 (570)
..+++++++||+.|||+...+..+ +. .....++..+..|....++ +++++.++++||||+++++..++..
T Consensus 157 ~~~~~~~~lR~~~vyG~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~- 232 (314)
T TIGR02197 157 ALSAQVVGLRYFNVYGPREYHKGK-MA--SVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN- 232 (314)
T ss_pred ccCCceEEEEEeeccCCCCCCCCC-cc--cHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc-
Confidence 346799999999999987533111 11 1222344555555544443 4677889999999999999998863
Q ss_pred hCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 320 AKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 320 ~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
. .+++||++++ .++|+.|+++.+.+.++..+
T Consensus 233 -~---~~~~yni~~~--~~~s~~e~~~~i~~~~g~~~ 263 (314)
T TIGR02197 233 -G---VSGIFNLGTG--RARSFNDLADAVFKALGKDE 263 (314)
T ss_pred -c---cCceEEcCCC--CCccHHHHHHHHHHHhCCCC
Confidence 1 2569999998 89999999999999988654
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.8e-26 Score=238.57 Aligned_cols=264 Identities=14% Similarity=0.128 Sum_probs=178.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|||||||||||++|+++|++.| .+|++++|+.... +.+. + +.. .+.. .....++.+
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G---~~V~~~~r~~~~~---~~l~-~---------l~~-~~~~--~~~~~~~~~ 111 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHG---YSVRIAVDTQEDK---EKLR-E---------MEM-FGEM--GRSNDGIWT 111 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHH-H---------Hhh-hccc--cccCCceEE
Confidence 668999999999999999999999998 5777888864221 1111 0 000 0000 000135788
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccc---cHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecc--e
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDE---RYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA--Y 164 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~---~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa--~ 164 (570)
+.+|++ +.+....+++++|+|||+|+.+.... ..+...++|+.|+.+++++|++..++++|||+||+ .
T Consensus 112 v~~Dl~-------d~~~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~ 184 (367)
T PLN02686 112 VMANLT-------EPESLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLAC 184 (367)
T ss_pred EEcCCC-------CHHHHHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHh
Confidence 999999 44445577788999999999764321 12345688999999999999986579999999996 4
Q ss_pred eecCC--C---cccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHH
Q 008324 165 VAGER--T---GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (570)
Q Consensus 165 v~~~~--~---g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE 239 (570)
+++.. . ..++|. ++.+.+. ...+.+.|+.||..+|
T Consensus 185 vyg~~~~~~~~~~i~E~-----~~~~~~~-----------------------------------~~~p~~~Y~~sK~~~E 224 (367)
T PLN02686 185 VWRQNYPHDLPPVIDEE-----SWSDESF-----------------------------------CRDNKLWYALGKLKAE 224 (367)
T ss_pred cccccCCCCCCcccCCC-----CCCChhh-----------------------------------cccccchHHHHHHHHH
Confidence 56531 1 112332 1111000 0123467999999999
Q ss_pred HHHHHh--ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHH
Q 008324 240 MLMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (570)
Q Consensus 240 ~lv~~~--~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~ 317 (570)
.+++.+ ..+++++++||+.|||+...+. + +.. +..+..|.. .+++++ ..++++|||+|++++.++.
T Consensus 225 ~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~-----~---~~~-~~~~~~g~~-~~~g~g--~~~~v~V~Dva~A~~~al~ 292 (367)
T PLN02686 225 KAAWRAARGKGLKLATICPALVTGPGFFRR-----N---STA-TIAYLKGAQ-EMLADG--LLATADVERLAEAHVCVYE 292 (367)
T ss_pred HHHHHHHHhcCceEEEEcCCceECCCCCCC-----C---Chh-HHHHhcCCC-ccCCCC--CcCeEEHHHHHHHHHHHHh
Confidence 999876 3589999999999999864211 1 111 223445543 344444 3579999999999999886
Q ss_pred HhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 318 AHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 318 ~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
...... .+.+| ++++ .++++.|+++.+.+.++..
T Consensus 293 ~~~~~~-~~~~y-i~~g--~~~s~~e~~~~i~~~~g~~ 326 (367)
T PLN02686 293 AMGNKT-AFGRY-ICFD--HVVSREDEAEELARQIGLP 326 (367)
T ss_pred ccCCCC-CCCcE-EEeC--CCccHHHHHHHHHHHcCCC
Confidence 321111 24678 7777 7899999999999998753
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-25 Score=228.00 Aligned_cols=261 Identities=12% Similarity=0.059 Sum_probs=176.5
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+++|+|||||||||++++++|++.| ++|++++|+.......+.+. + +. + ...++.++
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G---~~V~~~~R~~~~~~~~~~~~-~---------l~---~------~~~~~~~~ 62 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRG---YTVHAAVQKNGETEIEKEIR-G---------LS---C------EEERLKVF 62 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEEcCchhhhHHHHHH-h---------cc---c------CCCceEEE
Confidence 36799999999999999999999998 67888888643221111111 0 00 0 02468889
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCC
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~ 169 (570)
.+|+++ .+....++.++|.|+|+++.... ....+..+++|+.||.+++++|.+..+++++|++||..+....
T Consensus 63 ~~Dl~d-------~~~~~~~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~ 135 (297)
T PLN02583 63 DVDPLD-------YHSILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWR 135 (297)
T ss_pred EecCCC-------HHHHHHHHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecc
Confidence 999994 44445777899999998866532 2335678999999999999999886468899999997654311
Q ss_pred -CcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--c
Q 008324 170 -TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--K 246 (570)
Q Consensus 170 -~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~ 246 (570)
.+...+.+++|+++.++... ......|+.||.++|++++++ .
T Consensus 136 ~~~~~~~~~~~E~~~~~~~~~-----------------------------------~~~~~~Y~~sK~~aE~~~~~~~~~ 180 (297)
T PLN02583 136 DDNISTQKDVDERSWSDQNFC-----------------------------------RKFKLWHALAKTLSEKTAWALAMD 180 (297)
T ss_pred cccCCCCCCCCcccCCCHHHH-----------------------------------hhcccHHHHHHHHHHHHHHHHHHH
Confidence 11111223333333222110 011236999999999999876 3
Q ss_pred cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCC
Q 008324 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~ 326 (570)
.+++++++||+.|+|+...+.. . ...|... ... ....++|+|||||++++.|++.. . . +
T Consensus 181 ~gi~~v~lrp~~v~Gp~~~~~~----------~----~~~~~~~-~~~--~~~~~~v~V~Dva~a~~~al~~~-~--~-~ 239 (297)
T PLN02583 181 RGVNMVSINAGLLMGPSLTQHN----------P----YLKGAAQ-MYE--NGVLVTVDVNFLVDAHIRAFEDV-S--S-Y 239 (297)
T ss_pred hCCcEEEEcCCcccCCCCCCch----------h----hhcCCcc-cCc--ccCcceEEHHHHHHHHHHHhcCc-c--c-C
Confidence 5899999999999998653210 0 1112111 111 23457999999999999999622 1 1 3
Q ss_pred ceEEecCCCCCcccHHHHHHHHhhhcccCCCC
Q 008324 327 NIYHVGSSLRNPVTLVSILDYGFVYFTKKPWI 358 (570)
Q Consensus 327 ~iyni~s~~~~pit~~~l~~~i~~~~~~~p~~ 358 (570)
..|+|+++ +...+.++.+++.+.+...|..
T Consensus 240 ~r~~~~~~--~~~~~~~~~~~~~~~~p~~~~~ 269 (297)
T PLN02583 240 GRYLCFNH--IVNTEEDAVKLAQMLSPLIPSP 269 (297)
T ss_pred CcEEEecC--CCccHHHHHHHHHHhCCCCCCC
Confidence 46999886 4455788999999988877654
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.1e-25 Score=232.04 Aligned_cols=263 Identities=14% Similarity=0.233 Sum_probs=174.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
-++++|||||||||||++++++|++.| .+|+++.|+.... +++..+ .. . ..++.+
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G---~~V~~~~r~~~~~---~~~~~~-------------~~----~--~~~~~~ 62 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRG---YTVHATLRDPAKS---LHLLSK-------------WK----E--GDRLRL 62 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCChHHH---HHHHHh-------------hc----c--CCeEEE
Confidence 357899999999999999999999988 6778888864321 111100 00 0 246889
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc-----ccHHH-----HHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-----ERYDV-----AFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~-----~~~~~-----~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
+.+|+++ .+....+++++|+|||+||..... .+... .++.|+.|+.+++++|++..++++||+
T Consensus 63 ~~~Dl~~-------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~ 135 (353)
T PLN02896 63 FRADLQE-------EGSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVF 135 (353)
T ss_pred EECCCCC-------HHHHHHHHcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEE
Confidence 9999994 444557778899999999976432 12332 345567999999999988645889999
Q ss_pred EecceeecCCCc------ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 160 VSTAYVAGERTG------LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 160 vSTa~v~~~~~g------~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
+||..++|.... .++|+ .+...+... ......+.|+.
T Consensus 136 ~SS~~vyg~~~~~~~~~~~~~E~-----~~~p~~~~~--------------------------------~~~~~~~~Y~~ 178 (353)
T PLN02896 136 TSSISTLTAKDSNGRWRAVVDET-----CQTPIDHVW--------------------------------NTKASGWVYVL 178 (353)
T ss_pred EechhhccccccCCCCCCccCcc-----cCCcHHHhh--------------------------------ccCCCCccHHH
Confidence 999999985321 12222 110000000 00022347999
Q ss_pred HHHHHHHHHHHh--ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCcee--eecCC---CeeeeeeehH
Q 008324 234 TKTMGEMLMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRC--LVGET---KVIMDVIPVD 306 (570)
Q Consensus 234 sK~~aE~lv~~~--~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~--~~~~~---~~~~d~VpVD 306 (570)
||.++|+++..+ ..+++++++||+.|||+...+. +......+.....|.... ..+.. ...+|+|||+
T Consensus 179 sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~ 252 (353)
T PLN02896 179 SKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPS------VPSSIQVLLSPITGDSKLFSILSAVNSRMGSIALVHIE 252 (353)
T ss_pred HHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCC------CCchHHHHHHHhcCCccccccccccccccCceeEEeHH
Confidence 999999999887 3589999999999999976421 111111122222332111 11111 1246999999
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhccc
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~ 354 (570)
|+|++++.++.. ... +.+|++ ++ .++++.|+++.+.+.++.
T Consensus 253 Dva~a~~~~l~~--~~~--~~~~~~-~~--~~~s~~el~~~i~~~~~~ 293 (353)
T PLN02896 253 DICDAHIFLMEQ--TKA--EGRYIC-CV--DSYDMSELINHLSKEYPC 293 (353)
T ss_pred HHHHHHHHHHhC--CCc--CccEEe-cC--CCCCHHHHHHHHHHhCCC
Confidence 999999998862 111 346865 44 689999999999998763
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-24 Score=227.25 Aligned_cols=262 Identities=18% Similarity=0.253 Sum_probs=180.0
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+|||||||||++|+++|++.| .+|+++.|..+... ..+. .+.. .+ ..++.++.+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~~~~~~~~--~~~~----------~~~~-~~-------~~~~~~~~~ 57 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNG---HDVVILDNLCNSKR--SVLP----------VIER-LG-------GKHPTFVEG 57 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCC---CeEEEEecCCCchH--hHHH----------HHHH-hc-------CCCceEEEc
Confidence 579999999999999999999988 56677766433221 1111 0000 00 135678899
Q ss_pred cCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeec
Q 008324 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~ 167 (570)
|+++ .+....+++ ++|+|||+||..... +.....+++|+.|+.+++++|++. ++++||++||+.++|
T Consensus 58 Dl~d-------~~~~~~~~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~yg 129 (338)
T PRK10675 58 DIRN-------EALLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNLIFSSSATVYG 129 (338)
T ss_pred cCCC-------HHHHHHHHhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHhhC
Confidence 9994 443445554 599999999876532 334567899999999999999987 789999999999987
Q ss_pred CCCc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhc
Q 008324 168 ERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSK 246 (570)
Q Consensus 168 ~~~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~ 246 (570)
...+ .++|+ .+. ..+.+.|+.+|..+|+++.++.
T Consensus 130 ~~~~~~~~E~-----~~~----------------------------------------~~p~~~Y~~sK~~~E~~~~~~~ 164 (338)
T PRK10675 130 DQPKIPYVES-----FPT----------------------------------------GTPQSPYGKSKLMVEQILTDLQ 164 (338)
T ss_pred CCCCCccccc-----cCC----------------------------------------CCCCChhHHHHHHHHHHHHHHH
Confidence 5321 22222 111 1235689999999999998762
Q ss_pred ---cCCcEEEEecCceecCCCCCCCccccC----ccchHHHHHHHhcCCc--eeeec------CCCeeeeeeehHHHHHH
Q 008324 247 ---ENLSLVIIRPTVVSGTYKEPFPGWVED----LKTINTLFVASAQGNL--RCLVG------ETKVIMDVIPVDMVVNA 311 (570)
Q Consensus 247 ---~~lp~~IvRPsiV~g~~~ep~~gw~~~----~~~~~~~i~~~~~G~~--~~~~~------~~~~~~d~VpVDdva~a 311 (570)
.+++++++|++.|||+..... +... .......+..+..|.. ..+.+ ++.+.+|+|+|+|+|++
T Consensus 165 ~~~~~~~~~ilR~~~v~g~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~~ 242 (338)
T PRK10675 165 KAQPDWSIALLRYFNPVGAHPSGD--MGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADG 242 (338)
T ss_pred HhcCCCcEEEEEeeeecCCCcccc--cccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHHHHH
Confidence 478999999999999742111 1010 0112233344443322 22222 56788999999999999
Q ss_pred HHHHHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 312 MIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
++.++...... ..+++||++++ +++|+.|+++.+.+.++..
T Consensus 243 ~~~~~~~~~~~-~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 283 (338)
T PRK10675 243 HVAAMEKLANK-PGVHIYNLGAG--VGSSVLDVVNAFSKACGKP 283 (338)
T ss_pred HHHHHHhhhcc-CCCceEEecCC--CceeHHHHHHHHHHHhCCC
Confidence 99988642111 12579999998 8999999999999998864
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-25 Score=230.49 Aligned_cols=237 Identities=17% Similarity=0.143 Sum_probs=167.0
Q ss_pred EEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccCC
Q 008324 16 LVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDIS 95 (570)
Q Consensus 16 lITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl~ 95 (570)
||||||||||++|++.|++.+. .|+++.+. ..+|++
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~---~v~~~~~~-----------------------------------------~~~Dl~ 36 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGF---TNLVLRTH-----------------------------------------KELDLT 36 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCC---cEEEeecc-----------------------------------------ccCCCC
Confidence 6999999999999999999884 33433210 147888
Q ss_pred CCCCCCCchhhHHHHhC--CccEEEEcCccCCc----cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCC
Q 008324 96 SEDLGLKDSNLKEELWN--ELDIMVNSAAITKF----DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 96 ~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f----~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~ 169 (570)
+.+.++.+++ ++|+|||+||.... .......++.|+.|+.+++++|++. ++++|||+||+++|+..
T Consensus 37 -------~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~SS~~vyg~~ 108 (306)
T PLN02725 37 -------RQADVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRH-GVKKLLFLGSSCIYPKF 108 (306)
T ss_pred -------CHHHHHHHHhccCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHc-CCCeEEEeCceeecCCC
Confidence 4444445554 58999999997542 2334567899999999999999997 78999999999999853
Q ss_pred Cc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc-hHHHHHHHHHHHHHHh--
Q 008324 170 TG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN-TYVFTKTMGEMLMQQS-- 245 (570)
Q Consensus 170 ~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n-~Y~~sK~~aE~lv~~~-- 245 (570)
.+ .++|+. +.+ ....+.+ .|+.||.++|++++.+
T Consensus 109 ~~~~~~E~~-----~~~-------------------------------------~~~~p~~~~Y~~sK~~~e~~~~~~~~ 146 (306)
T PLN02725 109 APQPIPETA-----LLT-------------------------------------GPPEPTNEWYAIAKIAGIKMCQAYRI 146 (306)
T ss_pred CCCCCCHHH-----hcc-------------------------------------CCCCCCcchHHHHHHHHHHHHHHHHH
Confidence 21 222211 000 0002223 4999999999988766
Q ss_pred ccCCcEEEEecCceecCCCCCCCccccCccchHHHH----HHHhcCCceee-ecCCCeeeeeeehHHHHHHHHHHHHHhh
Q 008324 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLF----VASAQGNLRCL-VGETKVIMDVIPVDMVVNAMIVAMVAHA 320 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i----~~~~~G~~~~~-~~~~~~~~d~VpVDdva~aii~a~~~~~ 320 (570)
..+++++++||+.|||+... ..+ ++-.....++ .+...|....+ +++++..+++|||+|+|++++.++...
T Consensus 147 ~~~~~~~~~R~~~vyG~~~~-~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~- 222 (306)
T PLN02725 147 QYGWDAISGMPTNLYGPHDN-FHP--ENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRY- 222 (306)
T ss_pred HhCCCEEEEEecceeCCCCC-CCC--CCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhcc-
Confidence 45899999999999998642 111 0001112222 22334544343 688888999999999999999888632
Q ss_pred CCCCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 321 KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 321 ~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
. ....||++++ .++++.|+++.+.+.++..
T Consensus 223 -~--~~~~~ni~~~--~~~s~~e~~~~i~~~~~~~ 252 (306)
T PLN02725 223 -S--GAEHVNVGSG--DEVTIKELAELVKEVVGFE 252 (306)
T ss_pred -c--cCcceEeCCC--CcccHHHHHHHHHHHhCCC
Confidence 1 1457899998 8999999999999988753
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.7e-25 Score=223.91 Aligned_cols=227 Identities=19% Similarity=0.254 Sum_probs=168.1
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
+|||||||||||++++++|++.| ++|+++.|+ .+|
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g---~~v~~~~r~------------------------------------------~~d 35 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEG---RVVVALTSS------------------------------------------QLD 35 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcC---CEEEEeCCc------------------------------------------ccC
Confidence 58999999999999999999988 567777663 256
Q ss_pred CCCCCCCCCchhhHHHHhCC--ccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecC
Q 008324 94 ISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (570)
Q Consensus 94 l~~~~lgls~~~~~~~l~~~--vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~ 168 (570)
+. +.+..+.++++ +|+|||+||..... ...+..+++|+.|+.+++++|++. +. +|||+||.++|+.
T Consensus 36 ~~-------~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~Ss~~vy~~ 106 (287)
T TIGR01214 36 LT-------DPEALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARH-GA-RLVHISTDYVFDG 106 (287)
T ss_pred CC-------CHHHHHHHHHhCCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeeeeecC
Confidence 66 34444455665 59999999976543 245667899999999999999986 44 8999999999975
Q ss_pred CCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccC
Q 008324 169 RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKEN 248 (570)
Q Consensus 169 ~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~ 248 (570)
.. +.++.|+.+. .+.+.|+.+|..+|.++..+ +
T Consensus 107 ~~----~~~~~E~~~~-----------------------------------------~~~~~Y~~~K~~~E~~~~~~--~ 139 (287)
T TIGR01214 107 EG----KRPYREDDAT-----------------------------------------NPLNVYGQSKLAGEQAIRAA--G 139 (287)
T ss_pred CC----CCCCCCCCCC-----------------------------------------CCcchhhHHHHHHHHHHHHh--C
Confidence 32 1223222211 23578999999999999875 6
Q ss_pred CcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCce
Q 008324 249 LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANI 328 (570)
Q Consensus 249 lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~i 328 (570)
++++|+||++|||+... . +....++..+..+....+.+ +...+++++||+|++++.++... . ..+++
T Consensus 140 ~~~~ilR~~~v~G~~~~------~--~~~~~~~~~~~~~~~~~~~~--~~~~~~v~v~Dva~a~~~~~~~~-~--~~~~~ 206 (287)
T TIGR01214 140 PNALIVRTSWLYGGGGG------R--NFVRTMLRLAGRGEELRVVD--DQIGSPTYAKDLARVIAALLQRL-A--RARGV 206 (287)
T ss_pred CCeEEEEeeecccCCCC------C--CHHHHHHHHhhcCCCceEec--CCCcCCcCHHHHHHHHHHHHhhc-c--CCCCe
Confidence 79999999999998631 1 12233444444443323333 35689999999999999988632 1 12579
Q ss_pred EEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 329 YHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 329 yni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
||++++ +++++.|+++.+.+.++...
T Consensus 207 ~ni~~~--~~~s~~e~~~~i~~~~~~~~ 232 (287)
T TIGR01214 207 YHLANS--GQCSWYEFAQAIFEEAGADG 232 (287)
T ss_pred EEEECC--CCcCHHHHHHHHHHHhCccc
Confidence 999998 89999999999999988654
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.7e-25 Score=267.43 Aligned_cols=281 Identities=21% Similarity=0.339 Sum_probs=198.1
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhC-CCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQ-PNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~-~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.++|||||||||+|.+|+++|++.+ ....+|++++|+.......+|+.+......+ +......++.++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~-----------~~~~~~~~i~~~ 1039 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGI-----------WDEEWASRIEVV 1039 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCC-----------CchhhhcceEEE
Confidence 4799999999999999999999876 2357899999988766666665532111111 001113579999
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCC
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~ 170 (570)
.||++++.+|+++... ..+.+++|+|||+||.+++..++......|+.||.+++++|++. ++++|+|+||..+++...
T Consensus 1040 ~gDl~~~~lgl~~~~~-~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~vSS~~v~~~~~ 1117 (1389)
T TIGR03443 1040 LGDLSKEKFGLSDEKW-SDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEG-KAKQFSFVSSTSALDTEY 1117 (1389)
T ss_pred eccCCCccCCcCHHHH-HHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhC-CCceEEEEeCeeecCccc
Confidence 9999999999987765 47778999999999999988888877789999999999999986 788999999999986421
Q ss_pred c-ccccc-------cCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHH
Q 008324 171 G-LILEN-------PLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (570)
Q Consensus 171 g-~i~E~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv 242 (570)
. ...+. .+++..+.. .....+.+.|+.||+.+|.++
T Consensus 1118 ~~~~~~~~~~~~~~~~~e~~~~~------------------------------------~~~~~~~~~Y~~sK~~aE~l~ 1161 (1389)
T TIGR03443 1118 YVNLSDELVQAGGAGIPESDDLM------------------------------------GSSKGLGTGYGQSKWVAEYII 1161 (1389)
T ss_pred ccchhhhhhhccCCCCCcccccc------------------------------------cccccCCCChHHHHHHHHHHH
Confidence 0 00000 011100000 001134678999999999999
Q ss_pred HHh-ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHH-hcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhh
Q 008324 243 QQS-KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVAS-AQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHA 320 (570)
Q Consensus 243 ~~~-~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~-~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~ 320 (570)
..+ ..+++++|+||+.|+|+.... .|... .....++.+. ..|. ..+.....|++||||||++++.++...
T Consensus 1162 ~~~~~~g~~~~i~Rpg~v~G~~~~g--~~~~~-~~~~~~~~~~~~~~~----~p~~~~~~~~~~Vddva~ai~~~~~~~- 1233 (1389)
T TIGR03443 1162 REAGKRGLRGCIVRPGYVTGDSKTG--ATNTD-DFLLRMLKGCIQLGL----IPNINNTVNMVPVDHVARVVVAAALNP- 1233 (1389)
T ss_pred HHHHhCCCCEEEECCCccccCCCcC--CCCch-hHHHHHHHHHHHhCC----cCCCCCccccccHHHHHHHHHHHHhCC-
Confidence 876 458999999999999986532 22111 1111222221 1222 233455789999999999999887532
Q ss_pred CCCCCCceEEecCCCCCcccHHHHHHHHhhh
Q 008324 321 KQPSDANIYHVGSSLRNPVTLVSILDYGFVY 351 (570)
Q Consensus 321 ~~~~~~~iyni~s~~~~pit~~~l~~~i~~~ 351 (570)
.......+||++++ .+++|.++++.+.+.
T Consensus 1234 ~~~~~~~i~~~~~~--~~~~~~~~~~~l~~~ 1262 (1389)
T TIGR03443 1234 PKESELAVAHVTGH--PRIRFNDFLGTLKTY 1262 (1389)
T ss_pred cccCCCCEEEeCCC--CCCcHHHHHHHHHHh
Confidence 11122469999988 789999999998764
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-24 Score=222.91 Aligned_cols=247 Identities=19% Similarity=0.261 Sum_probs=178.8
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+|||||||||+++++.|++.+ ++|+++.|+..... .+ ...++.++.+
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g---~~V~~~~r~~~~~~---~~------------------------~~~~~~~~~~ 50 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQG---EEVRVLVRPTSDRR---NL------------------------EGLDVEIVEG 50 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCC---CEEEEEEecCcccc---cc------------------------ccCCceEEEe
Confidence 579999999999999999999988 67889998654321 00 0136788999
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCCc
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~g 171 (570)
|++ +.+....+++++|+|||+|+.... .+.....+++|+.|+.+++++|++. +++++|++||.++++....
T Consensus 51 D~~-------~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~ 122 (328)
T TIGR03466 51 DLR-------DPASLRKAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEA-GVERVVYTSSVATLGVRGD 122 (328)
T ss_pred eCC-------CHHHHHHHHhCCCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEechhhcCcCCC
Confidence 999 445556778899999999987542 3456778999999999999999986 7899999999999885211
Q ss_pred ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--ccCC
Q 008324 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KENL 249 (570)
Q Consensus 172 ~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~~~l 249 (570)
+.+++|+.+..+ ....+.|+.+|..+|+++.++ ..++
T Consensus 123 ---~~~~~e~~~~~~--------------------------------------~~~~~~Y~~sK~~~e~~~~~~~~~~~~ 161 (328)
T TIGR03466 123 ---GTPADETTPSSL--------------------------------------DDMIGHYKRSKFLAEQAALEMAAEKGL 161 (328)
T ss_pred ---CCCcCccCCCCc--------------------------------------ccccChHHHHHHHHHHHHHHHHHhcCC
Confidence 112221111111 012357999999999999887 3489
Q ss_pred cEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceE
Q 008324 250 SLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIY 329 (570)
Q Consensus 250 p~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iy 329 (570)
+++++||+.+||+..... .....++.....+...... +...+++|++|+|++++.++.. .. .+.+|
T Consensus 162 ~~~ilR~~~~~G~~~~~~-------~~~~~~~~~~~~~~~~~~~---~~~~~~i~v~D~a~a~~~~~~~--~~--~~~~~ 227 (328)
T TIGR03466 162 PVVIVNPSTPIGPRDIKP-------TPTGRIIVDFLNGKMPAYV---DTGLNLVHVDDVAEGHLLALER--GR--IGERY 227 (328)
T ss_pred CEEEEeCCccCCCCCCCC-------CcHHHHHHHHHcCCCceee---CCCcceEEHHHHHHHHHHHHhC--CC--CCceE
Confidence 999999999999864210 1112334444444332222 2346899999999999988863 11 25689
Q ss_pred EecCCCCCcccHHHHHHHHhhhcccC
Q 008324 330 HVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 330 ni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
+++ + .++++.|+++.+.+.++..
T Consensus 228 ~~~-~--~~~s~~e~~~~i~~~~g~~ 250 (328)
T TIGR03466 228 ILG-G--ENLTLKQILDKLAEITGRP 250 (328)
T ss_pred Eec-C--CCcCHHHHHHHHHHHhCCC
Confidence 885 4 6899999999999998864
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.3e-24 Score=225.86 Aligned_cols=251 Identities=23% Similarity=0.266 Sum_probs=204.5
Q ss_pred cccHHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccc
Q 008324 3 LGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSF 82 (570)
Q Consensus 3 ~~~i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~ 82 (570)
.+.+..++.||+||||||||-+|+.+++++++.+| ++|+++.|++.+....+ ..++...|
T Consensus 241 ~~~i~~~~~gK~vLVTGagGSiGsel~~qil~~~p--~~i~l~~~~E~~~~~i~------------~el~~~~~------ 300 (588)
T COG1086 241 TELIGAMLTGKTVLVTGGGGSIGSELCRQILKFNP--KEIILFSRDEYKLYLID------------MELREKFP------ 300 (588)
T ss_pred HHHHHhHcCCCEEEEeCCCCcHHHHHHHHHHhcCC--CEEEEecCchHHHHHHH------------HHHHhhCC------
Confidence 44688999999999999999999999999999877 88999999876542221 12233323
Q ss_pred cCCceEEEeccCCCCCCCCCchhhHHHHhCC--ccEEEEcCccCC---ccccHHHHHHHhHHHHHHHHHHHHHccCceEE
Q 008324 83 ISEKITFVPGDISSEDLGLKDSNLKEELWNE--LDIMVNSAAITK---FDERYDVAFGINTLGVIHLVNFAKKCVKLKVF 157 (570)
Q Consensus 83 ~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~--vdiViH~AA~v~---f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~ 157 (570)
..++.++-||+. |.+..+.+.++ +|+|||.||.-+ .+.++.+++++|+.||+|++++|.++ ++++|
T Consensus 301 -~~~~~~~igdVr-------D~~~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~-~V~~~ 371 (588)
T COG1086 301 -ELKLRFYIGDVR-------DRDRVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKN-GVKKF 371 (588)
T ss_pred -CcceEEEecccc-------cHHHHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHh-CCCEE
Confidence 378899999999 77778888888 999999999754 35778999999999999999999998 99999
Q ss_pred EEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHH
Q 008324 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (570)
Q Consensus 158 V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~ 237 (570)
|.+||.-+. ++.|.|+.||.+
T Consensus 372 V~iSTDKAV-----------------------------------------------------------~PtNvmGaTKr~ 392 (588)
T COG1086 372 VLISTDKAV-----------------------------------------------------------NPTNVMGATKRL 392 (588)
T ss_pred EEEecCccc-----------------------------------------------------------CCchHhhHHHHH
Confidence 999985221 457999999999
Q ss_pred HHHHHHHhcc-----CCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHH
Q 008324 238 GEMLMQQSKE-----NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (570)
Q Consensus 238 aE~lv~~~~~-----~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ai 312 (570)
||.++..+.. +-.++++|.|+|.|+...-+|- +..++.+|.. .-..+++..+=|+-+++.|+.+
T Consensus 393 aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPl----------Fk~QI~~Ggp-lTvTdp~mtRyfMTI~EAv~LV 461 (588)
T COG1086 393 AEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPL----------FKKQIAEGGP-LTVTDPDMTRFFMTIPEAVQLV 461 (588)
T ss_pred HHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHH----------HHHHHHcCCC-ccccCCCceeEEEEHHHHHHHH
Confidence 9999988732 4789999999999987643332 3345666744 4457889999999999999999
Q ss_pred HHHHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccCCCC
Q 008324 313 IVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWI 358 (570)
Q Consensus 313 i~a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p~~ 358 (570)
+.|+... . .|++|-+--| .|++..|+++.+.+..|..|..
T Consensus 462 lqA~a~~---~-gGeifvldMG--epvkI~dLAk~mi~l~g~~~~~ 501 (588)
T COG1086 462 LQAGAIA---K-GGEIFVLDMG--EPVKIIDLAKAMIELAGQTPPG 501 (588)
T ss_pred HHHHhhc---C-CCcEEEEcCC--CCeEHHHHHHHHHHHhCCCCCC
Confidence 9988632 1 2789999988 8999999999999999977654
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.1e-24 Score=222.72 Aligned_cols=235 Identities=19% Similarity=0.228 Sum_probs=171.7
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|||||||||||++|+++|++.+. ..+|+++.|+.... ..+.. ..+ ..++.+
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~-~~~V~~~~r~~~~~---~~~~~-------------~~~-------~~~~~~ 57 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYN-PKKIIIYSRDELKQ---WEMQQ-------------KFP-------APCLRF 57 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCC-CcEEEEEcCChhHH---HHHHH-------------HhC-------CCcEEE
Confidence 5789999999999999999999999862 25788888764321 11110 000 146889
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceee
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f---~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~ 166 (570)
+.+|++ +.+....+++++|+|||+||.... ..+....+++|+.|+.+++++|++. ++++||++||....
T Consensus 58 v~~Dl~-------d~~~l~~~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~-~~~~iV~~SS~~~~ 129 (324)
T TIGR03589 58 FIGDVR-------DKERLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN-GVKRVVALSTDKAA 129 (324)
T ss_pred EEccCC-------CHHHHHHHHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCCC
Confidence 999999 455556778889999999997532 2344578999999999999999986 78899999985210
Q ss_pred cCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-
Q 008324 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (570)
Q Consensus 167 ~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~- 245 (570)
.+.++|+.||+.+|.++..+
T Consensus 130 -----------------------------------------------------------~p~~~Y~~sK~~~E~l~~~~~ 150 (324)
T TIGR03589 130 -----------------------------------------------------------NPINLYGATKLASDKLFVAAN 150 (324)
T ss_pred -----------------------------------------------------------CCCCHHHHHHHHHHHHHHHHH
Confidence 12367999999999998653
Q ss_pred ----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhC
Q 008324 246 ----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAK 321 (570)
Q Consensus 246 ----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~ 321 (570)
..+++++++||+.|+|+.. .....+......|.......+++..+++++|+|+|++++.++...
T Consensus 151 ~~~~~~gi~~~~lR~g~v~G~~~----------~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~-- 218 (324)
T TIGR03589 151 NISGSKGTRFSVVRYGNVVGSRG----------SVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERM-- 218 (324)
T ss_pred hhccccCcEEEEEeecceeCCCC----------CcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhC--
Confidence 3589999999999999742 112223333344542222346778899999999999999998632
Q ss_pred CCCCCceEEecCCCCCcccHHHHHHHHhhhc
Q 008324 322 QPSDANIYHVGSSLRNPVTLVSILDYGFVYF 352 (570)
Q Consensus 322 ~~~~~~iyni~s~~~~pit~~~l~~~i~~~~ 352 (570)
. .+++|+ +++ ...++.|+++.+.+..
T Consensus 219 ~--~~~~~~-~~~--~~~sv~el~~~i~~~~ 244 (324)
T TIGR03589 219 L--GGEIFV-PKI--PSMKITDLAEAMAPEC 244 (324)
T ss_pred C--CCCEEc-cCC--CcEEHHHHHHHHHhhC
Confidence 1 256884 555 5799999999998753
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-24 Score=225.17 Aligned_cols=225 Identities=13% Similarity=0.098 Sum_probs=167.3
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+|||||||+|++|+++|++.| ++|.+++|+.... ..+. ..+++++.|
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g---~~V~~l~R~~~~~---~~l~------------------------~~~v~~v~~ 50 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEG---YQVRCLVRNLRKA---SFLK------------------------EWGAELVYG 50 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC---CeEEEEEcChHHh---hhHh------------------------hcCCEEEEC
Confidence 589999999999999999999988 6789999975321 1111 146889999
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCCcc
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~g~ 172 (570)
|++ +.+.+..+++++|+|||+++.. . .......++|+.|+.+++++|++. ++++|||+||..+..
T Consensus 51 Dl~-------d~~~l~~al~g~d~Vi~~~~~~-~-~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~Ss~~~~~----- 115 (317)
T CHL00194 51 DLS-------LPETLPPSFKGVTAIIDASTSR-P-SDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFFSILNAEQ----- 115 (317)
T ss_pred CCC-------CHHHHHHHHCCCCEEEECCCCC-C-CCccchhhhhHHHHHHHHHHHHHc-CCCEEEEeccccccc-----
Confidence 999 4444567889999999998643 2 223345788999999999999997 899999999853211
Q ss_pred cccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccCCcEE
Q 008324 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLV 252 (570)
Q Consensus 173 i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp~~ 252 (570)
+ ....|..+|..+|+.+.+ .+++++
T Consensus 116 -----~------------------------------------------------~~~~~~~~K~~~e~~l~~--~~l~~t 140 (317)
T CHL00194 116 -----Y------------------------------------------------PYIPLMKLKSDIEQKLKK--SGIPYT 140 (317)
T ss_pred -----c------------------------------------------------CCChHHHHHHHHHHHHHH--cCCCeE
Confidence 0 123578899999999876 689999
Q ss_pred EEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEec
Q 008324 253 IIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVG 332 (570)
Q Consensus 253 IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~ 332 (570)
|+||+.+|+..- . ........+. +....+++...++|+++|+|+++..++... ...+++||++
T Consensus 141 ilRp~~~~~~~~-------~------~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~---~~~~~~~ni~ 203 (317)
T CHL00194 141 IFRLAGFFQGLI-------S------QYAIPILEKQ-PIWITNESTPISYIDTQDAAKFCLKSLSLP---ETKNKTFPLV 203 (317)
T ss_pred EEeecHHhhhhh-------h------hhhhhhccCC-ceEecCCCCccCccCHHHHHHHHHHHhcCc---cccCcEEEec
Confidence 999998775311 0 0011111222 233345566789999999999999887521 1236899999
Q ss_pred CCCCCcccHHHHHHHHhhhcccCC
Q 008324 333 SSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 333 s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
++ +++|+.|+++.+.+..|+.+
T Consensus 204 g~--~~~s~~el~~~~~~~~g~~~ 225 (317)
T CHL00194 204 GP--KSWNSSEIISLCEQLSGQKA 225 (317)
T ss_pred CC--CccCHHHHHHHHHHHhCCCC
Confidence 98 89999999999999988753
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.8e-24 Score=219.29 Aligned_cols=260 Identities=20% Similarity=0.282 Sum_probs=179.6
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
+|||||||||||+.++++|++.+ .+|+++.|..+... +++. ++ . . ..++..+.+|
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g---~~V~~~~~~~~~~~--~~~~-~~---------~--------~--~~~~~~~~~D 55 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESG---HEVVVLDNLSNGSP--EALK-RG---------E--------R--ITRVTFVEGD 55 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCC---CeEEEEeCCCccch--hhhh-hh---------c--------c--ccceEEEECC
Confidence 58999999999999999999988 45666655432211 1111 00 0 0 1257788999
Q ss_pred CCCCCCCCCchhhHHHHhC--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecC
Q 008324 94 ISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (570)
Q Consensus 94 l~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~ 168 (570)
+++ .+..+.+++ ++|+|||+||..... ......++.|+.|+.+++++|.+. +++++|++||.++++.
T Consensus 56 ~~~-------~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~ss~~~~g~ 127 (328)
T TIGR01179 56 LRD-------RELLDRLFEEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQT-GVKKFIFSSSAAVYGE 127 (328)
T ss_pred CCC-------HHHHHHHHHhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhc-CCCEEEEecchhhcCC
Confidence 994 343445554 699999999976432 234556889999999999999986 7889999999988875
Q ss_pred CCc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--
Q 008324 169 RTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (570)
Q Consensus 169 ~~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~-- 245 (570)
..+ .++|+ .+. .+.+.|+.+|+.+|.++..+
T Consensus 128 ~~~~~~~e~-----~~~-----------------------------------------~~~~~y~~sK~~~e~~~~~~~~ 161 (328)
T TIGR01179 128 PSSIPISED-----SPL-----------------------------------------GPINPYGRSKLMSERILRDLSK 161 (328)
T ss_pred CCCCCcccc-----CCC-----------------------------------------CCCCchHHHHHHHHHHHHHHHH
Confidence 432 22222 111 23468999999999999876
Q ss_pred c-cCCcEEEEecCceecCCCCCCCccccC-ccchHHHHHHHhcC--Cceeee------cCCCeeeeeeehHHHHHHHHHH
Q 008324 246 K-ENLSLVIIRPTVVSGTYKEPFPGWVED-LKTINTLFVASAQG--NLRCLV------GETKVIMDVIPVDMVVNAMIVA 315 (570)
Q Consensus 246 ~-~~lp~~IvRPsiV~g~~~ep~~gw~~~-~~~~~~~i~~~~~G--~~~~~~------~~~~~~~d~VpVDdva~aii~a 315 (570)
. .+++++|+||+.|||+..++..++... .......+.....| ....+. .+++...++||++|+++++..+
T Consensus 162 ~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~~~ 241 (328)
T TIGR01179 162 ADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLAA 241 (328)
T ss_pred hccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHHHHH
Confidence 2 689999999999999865444333211 11112222222221 111121 3556789999999999999988
Q ss_pred HHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 316 MVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 316 ~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
+...... ..+++||++++ .++|+.|+++.+.+.++..
T Consensus 242 ~~~~~~~-~~~~~~n~~~~--~~~s~~ei~~~~~~~~g~~ 278 (328)
T TIGR01179 242 LEYLLNG-GESHVYNLGYG--QGFSVLEVIEAFKKVSGVD 278 (328)
T ss_pred HhhhhcC-CCcceEEcCCC--CcccHHHHHHHHHHHhCCC
Confidence 8643221 22679999998 8899999999999998864
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.3e-24 Score=216.36 Aligned_cols=230 Identities=21% Similarity=0.258 Sum_probs=157.9
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|.+.|.+.+ ..|+.+.|+ ..
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~---~~v~~~~r~------------------------------------------~~ 35 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERG---YEVIATSRS------------------------------------------DL 35 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTS---EEEEEESTT------------------------------------------CS
T ss_pred CEEEEECCCCHHHHHHHHHHhhCC---CEEEEeCch------------------------------------------hc
Confidence 689999999999999999999876 455655442 35
Q ss_pred cCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeec
Q 008324 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~ 167 (570)
|++ +.+....+++ ++|+||||||..+.+ .+.+.++.+|+.++.++.++|++. + .++||+||.+|+.
T Consensus 36 dl~-------d~~~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~-~-~~li~~STd~VFd 106 (286)
T PF04321_consen 36 DLT-------DPEAVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKER-G-ARLIHISTDYVFD 106 (286)
T ss_dssp -TT-------SHHHHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHC-T--EEEEEEEGGGS-
T ss_pred CCC-------CHHHHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHc-C-CcEEEeeccEEEc
Confidence 666 4444445554 489999999987643 467889999999999999999985 4 4899999999997
Q ss_pred CCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcc
Q 008324 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE 247 (570)
Q Consensus 168 ~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~ 247 (570)
...+ .+|.|+++. .+.|.|+.||.++|+.+.+..+
T Consensus 107 G~~~----~~y~E~d~~-----------------------------------------~P~~~YG~~K~~~E~~v~~~~~ 141 (286)
T PF04321_consen 107 GDKG----GPYTEDDPP-----------------------------------------NPLNVYGRSKLEGEQAVRAACP 141 (286)
T ss_dssp SSTS----SSB-TTS---------------------------------------------SSHHHHHHHHHHHHHHHH-S
T ss_pred CCcc----cccccCCCC-----------------------------------------CCCCHHHHHHHHHHHHHHHhcC
Confidence 6532 234332221 3468999999999999998543
Q ss_pred CCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCc
Q 008324 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (570)
Q Consensus 248 ~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~ 327 (570)
...|+|++.+||.... +....++.....|....+. .+.....++++|+|.+++.++...........
T Consensus 142 --~~~IlR~~~~~g~~~~---------~~~~~~~~~~~~~~~i~~~--~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~G 208 (286)
T PF04321_consen 142 --NALILRTSWVYGPSGR---------NFLRWLLRRLRQGEPIKLF--DDQYRSPTYVDDLARVILELIEKNLSGASPWG 208 (286)
T ss_dssp --SEEEEEE-SEESSSSS---------SHHHHHHHHHHCTSEEEEE--SSCEE--EEHHHHHHHHHHHHHHHHH-GGG-E
T ss_pred --CEEEEecceecccCCC---------chhhhHHHHHhcCCeeEee--CCceeCCEEHHHHHHHHHHHHHhcccccccce
Confidence 7999999999998331 2333455556666654444 45788999999999999999986543222257
Q ss_pred eEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 328 IYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 328 iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
+||++++ +.+|+.|+++.+.+.++..+
T Consensus 209 iyh~~~~--~~~S~~e~~~~i~~~~~~~~ 235 (286)
T PF04321_consen 209 IYHLSGP--ERVSRYEFAEAIAKILGLDP 235 (286)
T ss_dssp EEE---B--S-EEHHHHHHHHHHHHTHCT
T ss_pred eEEEecC--cccCHHHHHHHHHHHhCCCC
Confidence 9999999 88999999999999998776
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.1e-24 Score=210.47 Aligned_cols=241 Identities=21% Similarity=0.287 Sum_probs=169.1
Q ss_pred EEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccC
Q 008324 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (570)
Q Consensus 15 VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl 94 (570)
||||||+|.||+.|+++|++.+| ++|+++.|++......++ .+++..+.. .....+.++.||+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p--~~lil~d~~E~~l~~l~~------------~l~~~~~~~---~v~~~~~~vigDv 63 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP--KKLILFDRDENKLYELER------------ELRSRFPDP---KVRFEIVPVIGDV 63 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB---SEEEEEES-HHHHHHHHH------------HCHHHC--T---TCEEEEE--CTSC
T ss_pred CEEEccccHHHHHHHHHHHhcCC--CeEEEeCCChhHHHHHHH------------HHhhccccc---CcccccCceeecc
Confidence 79999999999999999999877 789999997644322211 122222210 0011345679999
Q ss_pred CCCCCCCCchhhHHHHhC--CccEEEEcCccCC---ccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCC
Q 008324 95 SSEDLGLKDSNLKEELWN--ELDIMVNSAAITK---FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 95 ~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~---f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~ 169 (570)
. +.+.+..+++ ++|+|||.||.-+ ...++.+++++|+.||+|++++|.+. ++++||.+||.-+.
T Consensus 64 r-------d~~~l~~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~-~v~~~v~ISTDKAv--- 132 (293)
T PF02719_consen 64 R-------DKERLNRIFEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEH-GVERFVFISTDKAV--- 132 (293)
T ss_dssp C-------HHHHHHHHTT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHT-T-SEEEEEEECGCS---
T ss_pred c-------CHHHHHHHHhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEccccccC---
Confidence 9 7887888888 8999999999754 24678889999999999999999998 99999999996322
Q ss_pred CcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcc--
Q 008324 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE-- 247 (570)
Q Consensus 170 ~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~-- 247 (570)
.+.|.|+.||.++|+++..+..
T Consensus 133 --------------------------------------------------------~PtnvmGatKrlaE~l~~~~~~~~ 156 (293)
T PF02719_consen 133 --------------------------------------------------------NPTNVMGATKRLAEKLVQAANQYS 156 (293)
T ss_dssp --------------------------------------------------------S--SHHHHHHHHHHHHHHHHCCTS
T ss_pred --------------------------------------------------------CCCcHHHHHHHHHHHHHHHHhhhC
Confidence 3468999999999999998732
Q ss_pred ---CCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCC
Q 008324 248 ---NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (570)
Q Consensus 248 ---~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 324 (570)
+..++++|.|+|.|+...-+|. +..++..|.+-+ ..+++..+=++-+++.++.++.|+....
T Consensus 157 ~~~~t~f~~VRFGNVlgS~GSVip~----------F~~Qi~~g~PlT-vT~p~mtRffmti~EAv~Lvl~a~~~~~---- 221 (293)
T PF02719_consen 157 GNSDTKFSSVRFGNVLGSRGSVIPL----------FKKQIKNGGPLT-VTDPDMTRFFMTIEEAVQLVLQAAALAK---- 221 (293)
T ss_dssp SSS--EEEEEEE-EETTGTTSCHHH----------HHHHHHTTSSEE-ECETT-EEEEE-HHHHHHHHHHHHHH------
T ss_pred CCCCcEEEEEEecceecCCCcHHHH----------HHHHHHcCCcce-eCCCCcEEEEecHHHHHHHHHHHHhhCC----
Confidence 4689999999999987644444 344566775433 4678889999999999999999886322
Q ss_pred CCceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 325 ~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
.+++|..--| .|++..|+++.+.+..|..|
T Consensus 222 ~geifvl~mg--~~v~I~dlA~~~i~~~g~~~ 251 (293)
T PF02719_consen 222 GGEIFVLDMG--EPVKILDLAEAMIELSGLEP 251 (293)
T ss_dssp TTEEEEE-----TCEECCCHHHHHHHHTT-EE
T ss_pred CCcEEEecCC--CCcCHHHHHHHHHhhccccc
Confidence 2789999888 89999999999999988544
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.4e-23 Score=219.88 Aligned_cols=238 Identities=16% Similarity=0.183 Sum_probs=175.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.++++|+|||||||||+++++.|++.| .+|++++|+..+........ ++. . ...++++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G---~~V~~l~R~~~~~~~~~~~~-~~~---------~---------~~~~v~~ 115 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRG---YNVVAVAREKSGIRGKNGKE-DTK---------K---------ELPGAEV 115 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEEechhhccccchhh-HHh---------h---------hcCCceE
Confidence 457899999999999999999999988 67899999764422110000 000 0 0246889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC----CccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEeccee
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN----ELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~----~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v 165 (570)
+.+|+++ .+....+++ ++|+||||+|.... .....+++|+.++.+++++|++. ++++||++||.++
T Consensus 116 v~~Dl~d-------~~~l~~~~~~~~~~~D~Vi~~aa~~~~--~~~~~~~vn~~~~~~ll~aa~~~-gv~r~V~iSS~~v 185 (390)
T PLN02657 116 VFGDVTD-------ADSLRKVLFSEGDPVDVVVSCLASRTG--GVKDSWKIDYQATKNSLDAGREV-GAKHFVLLSAICV 185 (390)
T ss_pred EEeeCCC-------HHHHHHHHHHhCCCCcEEEECCccCCC--CCccchhhHHHHHHHHHHHHHHc-CCCEEEEEeeccc
Confidence 9999994 444455555 59999999986322 12234678999999999999987 8899999999865
Q ss_pred ecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008324 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (570)
Q Consensus 166 ~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (570)
++. .+.|..+|...|+.+...
T Consensus 186 ~~p-----------------------------------------------------------~~~~~~sK~~~E~~l~~~ 206 (390)
T PLN02657 186 QKP-----------------------------------------------------------LLEFQRAKLKFEAELQAL 206 (390)
T ss_pred cCc-----------------------------------------------------------chHHHHHHHHHHHHHHhc
Confidence 421 134788999999988764
Q ss_pred ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCee-eeeeehHHHHHHHHHHHHHhhCCCC
Q 008324 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVI-MDVIPVDMVVNAMIVAMVAHAKQPS 324 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~-~d~VpVDdva~aii~a~~~~~~~~~ 324 (570)
..+++++|+||+.+|++.. +.+..+..|....++++++.. .++|+++|+|.+++.++... ..
T Consensus 207 ~~gl~~tIlRp~~~~~~~~--------------~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~---~~ 269 (390)
T PLN02657 207 DSDFTYSIVRPTAFFKSLG--------------GQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDE---SK 269 (390)
T ss_pred cCCCCEEEEccHHHhcccH--------------HHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCc---cc
Confidence 5689999999999997421 123334456665677887764 46899999999999888522 12
Q ss_pred CCceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 325 ~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
.+++||++++ .+.+|+.|+++.+.+.+|+.+
T Consensus 270 ~~~~~~Iggp-~~~~S~~Eia~~l~~~lG~~~ 300 (390)
T PLN02657 270 INKVLPIGGP-GKALTPLEQGEMLFRILGKEP 300 (390)
T ss_pred cCCEEEcCCC-CcccCHHHHHHHHHHHhCCCC
Confidence 2679999874 147999999999999998754
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.6e-23 Score=210.19 Aligned_cols=221 Identities=13% Similarity=0.109 Sum_probs=149.2
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.|+|||||||||||++|+++|++.|.+ |... .
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~---V~~~---------------------------------------------~ 40 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGID---FHYG---------------------------------------------S 40 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCE---EEEe---------------------------------------------c
Confidence 479999999999999999999998843 3321 1
Q ss_pred ccCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCc------cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecc
Q 008324 92 GDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF------DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f------~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa 163 (570)
+|+. +.+.....++ ++|+|||+||.+.. .++...++++|+.||.+++++|++. +++ ++++||.
T Consensus 41 ~~~~-------~~~~v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-gv~-~v~~sS~ 111 (298)
T PLN02778 41 GRLE-------NRASLEADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER-GLV-LTNYATG 111 (298)
T ss_pred CccC-------CHHHHHHHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCC-EEEEecc
Confidence 2222 1111112222 68999999997642 2455678999999999999999997 775 6677877
Q ss_pred eeecCCCcc-c-ccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHH
Q 008324 164 YVAGERTGL-I-LENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (570)
Q Consensus 164 ~v~~~~~g~-i-~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~l 241 (570)
.+++..... . +..+++|+++. .++.+.|+.||.++|.+
T Consensus 112 ~vy~~~~~~p~~~~~~~~Ee~~p----------------------------------------~~~~s~Yg~sK~~~E~~ 151 (298)
T PLN02778 112 CIFEYDDAHPLGSGIGFKEEDTP----------------------------------------NFTGSFYSKTKAMVEEL 151 (298)
T ss_pred eEeCCCCCCCcccCCCCCcCCCC----------------------------------------CCCCCchHHHHHHHHHH
Confidence 777643210 0 01112211110 02237899999999999
Q ss_pred HHHhccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhC
Q 008324 242 MQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAK 321 (570)
Q Consensus 242 v~~~~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~ 321 (570)
+..+. +..++|++++++... .....++..+..+......+ .++++++|++++++.++..
T Consensus 152 ~~~y~---~~~~lr~~~~~~~~~----------~~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~v~al~~~l~~--- 210 (298)
T PLN02778 152 LKNYE---NVCTLRVRMPISSDL----------SNPRNFITKITRYEKVVNIP-----NSMTILDELLPISIEMAKR--- 210 (298)
T ss_pred HHHhh---ccEEeeecccCCccc----------ccHHHHHHHHHcCCCeeEcC-----CCCEEHHHHHHHHHHHHhC---
Confidence 98764 467899988777421 11122444555553322222 2799999999999988742
Q ss_pred CCCCCceEEecCCCCCcccHHHHHHHHhhhccc
Q 008324 322 QPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 322 ~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~ 354 (570)
.. ..+||++++ .++|+.|+++.+.+.++.
T Consensus 211 ~~--~g~yNigs~--~~iS~~el~~~i~~~~~~ 239 (298)
T PLN02778 211 NL--TGIYNFTNP--GVVSHNEILEMYRDYIDP 239 (298)
T ss_pred CC--CCeEEeCCC--CcccHHHHHHHHHHHhCC
Confidence 11 359999998 799999999999999885
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4e-23 Score=204.10 Aligned_cols=265 Identities=20% Similarity=0.236 Sum_probs=194.5
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+++||||||+||||+|.+-+|++.|++|..|--+.|+- .....|.+ +..++ ..+|.+++
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~--~~sl~r~~-------------~l~~~------~~~v~f~~ 60 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSY--LESLKRVR-------------QLLGE------GKSVFFVE 60 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccc--hhHHHHHH-------------HhcCC------CCceEEEE
Confidence 68999999999999999999999997775555555554 23334433 22222 37899999
Q ss_pred ccCCCCCCCCCchhhHHHHhCC--ccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceee
Q 008324 92 GDISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~--vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~ 166 (570)
+|+. |...++++++. .|.|+|.||.-.-. +.+...+..|+.||.++|+.+++. +++.+|+.||+.+|
T Consensus 61 ~Dl~-------D~~~L~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~-~~~~~V~sssatvY 132 (343)
T KOG1371|consen 61 GDLN-------DAEALEKLFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAH-NVKALVFSSSATVY 132 (343)
T ss_pred eccC-------CHHHHHHHHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHc-CCceEEEecceeee
Confidence 9999 67777788874 89999999975432 333556889999999999999998 69999999999999
Q ss_pred cCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-
Q 008324 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (570)
Q Consensus 167 ~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~- 245 (570)
|... +-+++|.++.+ .+.|+|+.||...|.++..+
T Consensus 133 G~p~----~ip~te~~~t~----------------------------------------~p~~pyg~tK~~iE~i~~d~~ 168 (343)
T KOG1371|consen 133 GLPT----KVPITEEDPTD----------------------------------------QPTNPYGKTKKAIEEIIHDYN 168 (343)
T ss_pred cCcc----eeeccCcCCCC----------------------------------------CCCCcchhhhHHHHHHHHhhh
Confidence 9754 34444434332 35689999999999999987
Q ss_pred -ccCCcEEEEecCceec--CCC---CCCCccccCccchHHHHHHHhcCCce--------eeecCCCeeeeeeehHHHHHH
Q 008324 246 -KENLSLVIIRPTVVSG--TYK---EPFPGWVEDLKTINTLFVASAQGNLR--------CLVGETKVIMDVIPVDMVVNA 311 (570)
Q Consensus 246 -~~~lp~~IvRPsiV~g--~~~---ep~~gw~~~~~~~~~~i~~~~~G~~~--------~~~~~~~~~~d~VpVDdva~a 311 (570)
...+.++++|...++| ++. ++..+...++- +.+.+...|... ....+++.++|.++|-|.|++
T Consensus 169 ~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~---p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdyi~v~Dla~~ 245 (343)
T KOG1371|consen 169 KAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLL---PYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDYIHVLDLADG 245 (343)
T ss_pred ccccceEEEEEeccccCccccCccCCCCccCccccc---ccccchhhcccccceeecCcccccCCCeeecceeeEehHHH
Confidence 3358899999999999 443 22233322221 122222222221 122455889999999999999
Q ss_pred HHHHHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 312 MIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
++.|+...... .+..|||++++ .+.+..+++..+.+..|..
T Consensus 246 h~~al~k~~~~-~~~~i~Nlgtg--~g~~V~~lv~a~~k~~g~~ 286 (343)
T KOG1371|consen 246 HVAALGKLRGA-AEFGVYNLGTG--KGSSVLELVTAFEKALGVK 286 (343)
T ss_pred HHHHhhccccc-hheeeEeecCC--CCccHHHHHHHHHHHhcCC
Confidence 99999754332 23459999999 8899999999999988865
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.3e-22 Score=199.27 Aligned_cols=225 Identities=21% Similarity=0.266 Sum_probs=169.0
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||++|.||..|.+.|. .+ ..|+.+.|+ ..
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~---~~v~a~~~~------------------------------------------~~ 34 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GE---FEVIATDRA------------------------------------------EL 34 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CC---ceEEeccCc------------------------------------------cc
Confidence 359999999999999999997 33 455555442 27
Q ss_pred cCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeec
Q 008324 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~ 167 (570)
|++ +.+....++. ++|+|||+||.+..+ ...+.++.+|..|+.++.++|++. + ..+||+||.||+.
T Consensus 35 Dit-------d~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~-g-a~lVhiSTDyVFD 105 (281)
T COG1091 35 DIT-------DPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEV-G-ARLVHISTDYVFD 105 (281)
T ss_pred ccc-------ChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHh-C-CeEEEeecceEec
Confidence 888 4554556665 479999999998765 346889999999999999999997 4 3699999999987
Q ss_pred CCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcc
Q 008324 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE 247 (570)
Q Consensus 168 ~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~ 247 (570)
...+ .+|.|++.. ++-|-|+.||.++|..+.++.
T Consensus 106 G~~~----~~Y~E~D~~-----------------------------------------~P~nvYG~sKl~GE~~v~~~~- 139 (281)
T COG1091 106 GEKG----GPYKETDTP-----------------------------------------NPLNVYGRSKLAGEEAVRAAG- 139 (281)
T ss_pred CCCC----CCCCCCCCC-----------------------------------------CChhhhhHHHHHHHHHHHHhC-
Confidence 6542 345443332 456889999999999999853
Q ss_pred CCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCc
Q 008324 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (570)
Q Consensus 248 ~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~ 327 (570)
-...|+|.|.|||... . |-+..++.....|.. +....++....+++.|+|.++..++.... ...
T Consensus 140 -~~~~I~Rtswv~g~~g-------~--nFv~tml~la~~~~~--l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~----~~~ 203 (281)
T COG1091 140 -PRHLILRTSWVYGEYG-------N--NFVKTMLRLAKEGKE--LKVVDDQYGSPTYTEDLADAILELLEKEK----EGG 203 (281)
T ss_pred -CCEEEEEeeeeecCCC-------C--CHHHHHHHHhhcCCc--eEEECCeeeCCccHHHHHHHHHHHHhccc----cCc
Confidence 5689999999999754 1 222233333444433 33445688999999999999999875322 144
Q ss_pred eEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 328 IYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 328 iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
+||++++ ..+||.|+.+.+.+.++...
T Consensus 204 ~yH~~~~--g~~Swydfa~~I~~~~~~~~ 230 (281)
T COG1091 204 VYHLVNS--GECSWYEFAKAIFEEAGVDG 230 (281)
T ss_pred EEEEeCC--CcccHHHHHHHHHHHhCCCc
Confidence 9999998 77999999999999987443
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-22 Score=213.83 Aligned_cols=238 Identities=16% Similarity=0.193 Sum_probs=169.7
Q ss_pred CCEEEEE----CCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 12 NKTILVS----GVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 12 ~k~VlIT----GaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.++|||| |||||||++|++.|++.| ++|++++|+...... + ..+-|..+. .+...++
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G---~~V~~l~R~~~~~~~---~-----~~~~~~~~~--------~l~~~~v 112 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAG---HEVTLFTRGKEPSQK---M-----KKEPFSRFS--------ELSSAGV 112 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCC---CEEEEEecCCcchhh---h-----ccCchhhhh--------HhhhcCc
Confidence 4689999 999999999999999998 688999998643210 0 000011000 0001358
Q ss_pred EEEeccCCCCCCCCCchhhHHHHh--CCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEeccee
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELW--NELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~--~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v 165 (570)
+++.||+. +. ..++ .++|+|||+++. +..++.+++++|++. ++++|||+||+.+
T Consensus 113 ~~v~~D~~-------d~---~~~~~~~~~d~Vi~~~~~-------------~~~~~~~ll~aa~~~-gvkr~V~~SS~~v 168 (378)
T PLN00016 113 KTVWGDPA-------DV---KSKVAGAGFDVVYDNNGK-------------DLDEVEPVADWAKSP-GLKQFLFCSSAGV 168 (378)
T ss_pred eEEEecHH-------HH---HhhhccCCccEEEeCCCC-------------CHHHHHHHHHHHHHc-CCCEEEEEccHhh
Confidence 89999988 31 1222 469999999763 245789999999986 8999999999999
Q ss_pred ecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008324 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (570)
Q Consensus 166 ~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (570)
|+...+ .++.|..+ .+++. +|..+|.++.+
T Consensus 169 yg~~~~----~p~~E~~~--------------------------------------------~~p~~-sK~~~E~~l~~- 198 (378)
T PLN00016 169 YKKSDE----PPHVEGDA--------------------------------------------VKPKA-GHLEVEAYLQK- 198 (378)
T ss_pred cCCCCC----CCCCCCCc--------------------------------------------CCCcc-hHHHHHHHHHH-
Confidence 986431 11111111 11122 89999999876
Q ss_pred ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCC
Q 008324 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~ 325 (570)
.+++++|+||+.+||+.... .....++..+..|....++++++...+++|++|+|++++.++... . ..
T Consensus 199 -~~l~~~ilRp~~vyG~~~~~--------~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~-~--~~ 266 (378)
T PLN00016 199 -LGVNWTSFRPQYIYGPGNNK--------DCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNP-K--AA 266 (378)
T ss_pred -cCCCeEEEeceeEECCCCCC--------chHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCc-c--cc
Confidence 58999999999999986421 111223445556665566788889999999999999999988632 1 12
Q ss_pred CceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 326 ANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 326 ~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
+++||++++ +++|+.|+++.+.+.+|..+
T Consensus 267 ~~~yni~~~--~~~s~~el~~~i~~~~g~~~ 295 (378)
T PLN00016 267 GQIFNIVSD--RAVTFDGMAKACAKAAGFPE 295 (378)
T ss_pred CCEEEecCC--CccCHHHHHHHHHHHhCCCC
Confidence 579999998 88999999999999988653
|
|
| >PF03015 Sterile: Male sterility protein; InterPro: IPR004262 This family represents the C-terminal region of the male sterility protein in a number of organisms | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.2e-24 Score=181.05 Aligned_cols=93 Identities=28% Similarity=0.467 Sum_probs=85.6
Q ss_pred HHHhhHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHcccccccceEEEechhHHHHHHHhcCCCCCCcccccCCCCC
Q 008324 386 RYLLPLKGLQVANTVFHNFFKGVYNDLRKKVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSI 465 (570)
Q Consensus 386 ~~~lPa~~lD~~~~~~g~~~~~~~~kl~rk~~~~~~~~~~~~~Ft~~~w~F~~~n~~~L~~~ls~~D~~r~~F~fD~~~i 465 (570)
.|.+||+++|+++.+.|++ |++.+++++ +.++.++++||++++|.|+|+|+++|++.|+++| ++.|+||+++|
T Consensus 2 ~h~lPA~~~D~~~~l~g~k--p~~~k~~~k---i~~~~~~~~~F~~~eW~F~~~n~~~L~~~l~~~D--~~~F~fD~~~i 74 (94)
T PF03015_consen 2 FHFLPAYLLDLILRLFGQK--PRMVKIYRK---IRKALEVLEYFTTNEWIFDNDNTRRLWERLSPED--REIFNFDIRSI 74 (94)
T ss_pred cchHHHHHHHHHHHHhCCC--hHHHHHHHH---HHHHHHHHHHHHhCceeecchHHHHHHHhCchhc--CceecCCCCCC
Confidence 4789999999999999885 888888655 5677888889999999999999999999999999 67999999999
Q ss_pred CHHHHHhhcChhhHHHHhcCC
Q 008324 466 EWSDYFMNTHIPGVEKLLQQK 486 (570)
Q Consensus 466 dW~~Y~~~~~i~GirkyllKe 486 (570)
||++|+.+| ++|+|||++||
T Consensus 75 dW~~Y~~~~-~~G~rkyllke 94 (94)
T PF03015_consen 75 DWEEYFRNY-IPGIRKYLLKE 94 (94)
T ss_pred CHHHHHHHH-HHHHHHHHhCC
Confidence 999999996 99999999998
|
The Arabidopsis thaliana male sterility 2 (MS2) protein is involved in male gametogenesis. The MS2 protein shows sequence similarity to a jojoba protein (also a member of this group) that converts wax fatty acids to fatty alcohols. It has been suggested that a possible function of the MS2 protein may be as a fatty acyl reductase in the formation of pollen wall substances [].; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process |
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.8e-22 Score=203.15 Aligned_cols=235 Identities=16% Similarity=0.146 Sum_probs=159.2
Q ss_pred EEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccC
Q 008324 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (570)
Q Consensus 15 VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl 94 (570)
|||||||||||+++++.|++.+ .+|++++|+........ ...+ .|+
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~---------------------------~~~~----~~~ 46 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDG---HEVTILTRSPPAGANTK---------------------------WEGY----KPW 46 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcC---CEEEEEeCCCCCCCccc---------------------------ceee----ecc
Confidence 6999999999999999999988 68899999765432100 0011 111
Q ss_pred CCCCCCCCchhhHHHHhCCccEEEEcCccCCccc-----cHHHHHHHhHHHHHHHHHHHHHccCc--eEEEEEecceeec
Q 008324 95 SSEDLGLKDSNLKEELWNELDIMVNSAAITKFDE-----RYDVAFGINTLGVIHLVNFAKKCVKL--KVFVHVSTAYVAG 167 (570)
Q Consensus 95 ~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~-----~~~~~~~~Nv~gt~~ll~la~~~~~l--~~~V~vSTa~v~~ 167 (570)
. ... ....+.++|+|||+||...... ......++|+.|+.+++++|++. ++ ..||++||+++++
T Consensus 47 ~-------~~~-~~~~~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~i~~S~~~~yg 117 (292)
T TIGR01777 47 A-------PLA-ESEALEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAA-EQKPKVFISASAVGYYG 117 (292)
T ss_pred c-------ccc-hhhhcCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhc-CCCceEEEEeeeEEEeC
Confidence 1 111 1244578999999999754322 23456789999999999999987 54 4688888888888
Q ss_pred CCCc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-
Q 008324 168 ERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (570)
Q Consensus 168 ~~~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~- 245 (570)
...+ .++|. .+. ...+.|...+...|..+...
T Consensus 118 ~~~~~~~~E~-----~~~-----------------------------------------~~~~~~~~~~~~~e~~~~~~~ 151 (292)
T TIGR01777 118 TSEDRVFTEE-----DSP-----------------------------------------AGDDFLAELCRDWEEAAQAAE 151 (292)
T ss_pred CCCCCCcCcc-----cCC-----------------------------------------CCCChHHHHHHHHHHHhhhch
Confidence 5331 22222 110 11234556666667766544
Q ss_pred ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCC
Q 008324 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~ 325 (570)
..+++++|+||+.|||+.. ++. ..++.....+. ....++++...++|+|||+|+++..++... ..
T Consensus 152 ~~~~~~~ilR~~~v~G~~~----~~~------~~~~~~~~~~~-~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~----~~ 216 (292)
T TIGR01777 152 DLGTRVVLLRTGIVLGPKG----GAL------AKMLPPFRLGL-GGPLGSGRQWFSWIHIEDLVQLILFALENA----SI 216 (292)
T ss_pred hcCCceEEEeeeeEECCCc----chh------HHHHHHHhcCc-ccccCCCCcccccEeHHHHHHHHHHHhcCc----cc
Confidence 3579999999999999743 111 11111111111 112577888999999999999999988521 12
Q ss_pred CceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 326 ANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 326 ~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
..+||++++ .++|+.|+++.+.+.++..
T Consensus 217 ~g~~~~~~~--~~~s~~di~~~i~~~~g~~ 244 (292)
T TIGR01777 217 SGPVNATAP--EPVRNKEFAKALARALHRP 244 (292)
T ss_pred CCceEecCC--CccCHHHHHHHHHHHhCCC
Confidence 458999998 8999999999999998753
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.6e-20 Score=211.05 Aligned_cols=201 Identities=15% Similarity=0.174 Sum_probs=152.1
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+|||||||||++++++|++.| ++|+++.|+.... + ..++.++.+
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G---~~Vv~l~R~~~~~-----~-------------------------~~~v~~v~g 47 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQG---HEVVGIARHRPDS-----W-------------------------PSSADFIAA 47 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCc---CEEEEEECCchhh-----c-------------------------ccCceEEEe
Confidence 579999999999999999999988 6778888864210 0 135778999
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCCcc
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~g~ 172 (570)
|++ +.+....+++++|+|||+|+.... ..++|+.||.+++++|++. ++++||++||..
T Consensus 48 DL~-------D~~~l~~al~~vD~VVHlAa~~~~------~~~vNv~GT~nLLeAa~~~-gvkr~V~iSS~~-------- 105 (854)
T PRK05865 48 DIR-------DATAVESAMTGADVVAHCAWVRGR------NDHINIDGTANVLKAMAET-GTGRIVFTSSGH-------- 105 (854)
T ss_pred eCC-------CHHHHHHHHhCCCEEEECCCcccc------hHHHHHHHHHHHHHHHHHc-CCCeEEEECCcH--------
Confidence 999 444456777899999999986431 4689999999999999987 788999999741
Q ss_pred cccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccCCcEE
Q 008324 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLV 252 (570)
Q Consensus 173 i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp~~ 252 (570)
|..+|+++.+ .+++++
T Consensus 106 --------------------------------------------------------------K~aaE~ll~~--~gl~~v 121 (854)
T PRK05865 106 --------------------------------------------------------------QPRVEQMLAD--CGLEWV 121 (854)
T ss_pred --------------------------------------------------------------HHHHHHHHHH--cCCCEE
Confidence 5567777765 589999
Q ss_pred EEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEec
Q 008324 253 IIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVG 332 (570)
Q Consensus 253 IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~ 332 (570)
|+||++|||+.. +.| +.... +......++.+...|+|||+|+|++++.++... . ..+.+||++
T Consensus 122 ILRp~~VYGP~~---~~~----------i~~ll-~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~-~--~~ggvyNIg 184 (854)
T PRK05865 122 AVRCALIFGRNV---DNW----------VQRLF-ALPVLPAGYADRVVQVVHSDDAQRLLVRALLDT-V--IDSGPVNLA 184 (854)
T ss_pred EEEeceEeCCCh---HHH----------HHHHh-cCceeccCCCCceEeeeeHHHHHHHHHHHHhCC-C--cCCCeEEEE
Confidence 999999999742 111 11111 111122345566789999999999999887522 1 125689999
Q ss_pred CCCCCcccHHHHHHHHhhh
Q 008324 333 SSLRNPVTLVSILDYGFVY 351 (570)
Q Consensus 333 s~~~~pit~~~l~~~i~~~ 351 (570)
++ +++|+.|+++.+.+.
T Consensus 185 sg--~~~Si~EIae~l~~~ 201 (854)
T PRK05865 185 AP--GELTFRRIAAALGRP 201 (854)
T ss_pred CC--CcccHHHHHHHHhhh
Confidence 98 889999999988764
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.2e-20 Score=179.01 Aligned_cols=235 Identities=16% Similarity=0.176 Sum_probs=159.1
Q ss_pred EEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccC
Q 008324 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (570)
Q Consensus 15 VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl 94 (570)
|+|||||||||++|+..|.+.| ++|++++|+....... + ...+..+.+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~g---h~v~iltR~~~~~~~~--~-------------------------~~~v~~~~~-- 48 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGG---HQVTILTRRPPKASQN--L-------------------------HPNVTLWEG-- 48 (297)
T ss_pred CeEeccccchhHHHHHHHHhCC---CeEEEEEcCCcchhhh--c-------------------------Cccccccch--
Confidence 6899999999999999999988 7889999987654211 0 011111111
Q ss_pred CCCCCCCCchhhHHHHhC-CccEEEEcCccCCc----cccH-HHHHHHhHHHHHHHHHHHHHcc-CceEEEEEecceeec
Q 008324 95 SSEDLGLKDSNLKEELWN-ELDIMVNSAAITKF----DERY-DVAFGINTLGVIHLVNFAKKCV-KLKVFVHVSTAYVAG 167 (570)
Q Consensus 95 ~~~~lgls~~~~~~~l~~-~vdiViH~AA~v~f----~~~~-~~~~~~Nv~gt~~ll~la~~~~-~l~~~V~vSTa~v~~ 167 (570)
.....+ ++|+|||+||..-+ ++.. +...+.-+..|+.|.++..++. +.+.+|--|...-||
T Consensus 49 ------------~~~~~~~~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG 116 (297)
T COG1090 49 ------------LADALTLGIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYG 116 (297)
T ss_pred ------------hhhcccCCCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEec
Confidence 112223 79999999997644 3333 3457889999999999998653 667788888888888
Q ss_pred CCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-c
Q 008324 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-K 246 (570)
Q Consensus 168 ~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~-~ 246 (570)
+.. |..++|..+..-+-..++|. -+ |....+. .
T Consensus 117 ~~~----~~~~tE~~~~g~~Fla~lc~----------------------------------------~W--E~~a~~a~~ 150 (297)
T COG1090 117 HSG----DRVVTEESPPGDDFLAQLCQ----------------------------------------DW--EEEALQAQQ 150 (297)
T ss_pred CCC----ceeeecCCCCCCChHHHHHH----------------------------------------HH--HHHHhhhhh
Confidence 753 33443333322222222221 11 3333333 3
Q ss_pred cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCC
Q 008324 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~ 326 (570)
.+.+++++|.|+|.|+....++.... ....+.| --.|++.+.++|||+||+++++..++.+. +. .
T Consensus 151 ~gtRvvllRtGvVLs~~GGaL~~m~~--------~fk~glG---G~~GsGrQ~~SWIhieD~v~~I~fll~~~-~l---s 215 (297)
T COG1090 151 LGTRVVLLRTGVVLSPDGGALGKMLP--------LFKLGLG---GKLGSGRQWFSWIHIEDLVNAILFLLENE-QL---S 215 (297)
T ss_pred cCceEEEEEEEEEecCCCcchhhhcc--------hhhhccC---CccCCCCceeeeeeHHHHHHHHHHHHhCc-CC---C
Confidence 58899999999999975422211111 1122222 23589999999999999999999999732 22 3
Q ss_pred ceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 327 NIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 327 ~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
..||++++ +|++..++.+.+.+.++++.
T Consensus 216 Gp~N~taP--~PV~~~~F~~al~r~l~RP~ 243 (297)
T COG1090 216 GPFNLTAP--NPVRNKEFAHALGRALHRPA 243 (297)
T ss_pred CcccccCC--CcCcHHHHHHHHHHHhCCCc
Confidence 47999999 99999999999999988753
|
|
| >cd09071 FAR_C C-terminal domain of fatty acyl CoA reductases | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.7e-21 Score=162.76 Aligned_cols=91 Identities=30% Similarity=0.438 Sum_probs=82.4
Q ss_pred HHHhhHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHcccccccceEEEechhHHHHHHHhcCCCCCCcccccCCCCC
Q 008324 386 RYLLPLKGLQVANTVFHNFFKGVYNDLRKKVKFVMRVVEIYKPYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSI 465 (570)
Q Consensus 386 ~~~lPa~~lD~~~~~~g~~~~~~~~kl~rk~~~~~~~~~~~~~Ft~~~w~F~~~n~~~L~~~ls~~D~~r~~F~fD~~~i 465 (570)
.|.+||.++|++..+.|++ |.+.++++++ .++.++++||++++|.|+++|+++|++.|+++| +++|+||+++|
T Consensus 2 ~~~lpa~~~d~~~~l~g~~--~~~~~~~~k~---~~~~~~~~~Ft~~~w~F~~~n~~~L~~~l~~~D--r~~F~fD~~~i 74 (92)
T cd09071 2 LHLLPAYLLDLLLRLLGRK--PRLLKLYRKI---HKLLDLLEYFTTNEWRFDNDNTRALWERLSEED--RELFNFDIRSI 74 (92)
T ss_pred cccchHHHHHHHHHHhCCC--hHHHHHHHHH---HHHHHHhhccccCeEEeeCcHHHHHHHHCCHHH--HHhCCCCCCCC
Confidence 3679999999999999775 7877775554 578899999999999999999999999999999 67999999999
Q ss_pred CHHHHHhhcChhhHHHHhc
Q 008324 466 EWSDYFMNTHIPGVEKLLQ 484 (570)
Q Consensus 466 dW~~Y~~~~~i~Girkyll 484 (570)
||++|+++| ++|+|+|++
T Consensus 75 dW~~Y~~~~-~~G~r~yll 92 (92)
T cd09071 75 DWDDYFENY-IPGLRKYLL 92 (92)
T ss_pred CHHHHHHHH-HHHHHHHhC
Confidence 999999997 999999986
|
C-terminal domain of fatty acyl CoA reductases, a family of SDR-like proteins. SDRs or short-chain dehydrogenases/reductases are Rossmann-fold NAD(P)H-binding proteins. Many proteins in this FAR_C family may function as fatty acyl-CoA reductases (FARs), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as the biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. The function of this C-terminal domain is unclear. |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.3e-19 Score=200.90 Aligned_cols=221 Identities=13% Similarity=0.101 Sum_probs=147.9
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+.|+|||||||||||++|++.|.+.+.+| ...
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v------------------------------------------------~~~ 410 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAY------------------------------------------------EYG 410 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCCeE------------------------------------------------Eee
Confidence 45789999999999999999999876332 112
Q ss_pred eccCCCCCCCCCchhhHHHHhC--CccEEEEcCccCC---c---cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEec
Q 008324 91 PGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITK---F---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~---f---~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vST 162 (570)
.+|++ +.+.....++ ++|+||||||.+. . .++...++++|+.||.+++++|++. +++ +||+||
T Consensus 411 ~~~l~-------d~~~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~-g~~-~v~~Ss 481 (668)
T PLN02260 411 KGRLE-------DRSSLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN-GLL-MMNFAT 481 (668)
T ss_pred ccccc-------cHHHHHHHHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc-CCe-EEEEcc
Confidence 24555 3333334443 6899999999763 2 2356778999999999999999997 775 788899
Q ss_pred ceeecCCCccc--ccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHH
Q 008324 163 AYVAGERTGLI--LENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (570)
Q Consensus 163 a~v~~~~~g~i--~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~ 240 (570)
.++++...... ...++.|+++. .+..|.|+.||.++|+
T Consensus 482 ~~v~~~~~~~~~~~~~p~~E~~~~----------------------------------------~~~~~~Yg~sK~~~E~ 521 (668)
T PLN02260 482 GCIFEYDAKHPEGSGIGFKEEDKP----------------------------------------NFTGSFYSKTKAMVEE 521 (668)
T ss_pred cceecCCcccccccCCCCCcCCCC----------------------------------------CCCCChhhHHHHHHHH
Confidence 88886421000 01223221110 0223889999999999
Q ss_pred HHHHhccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhh
Q 008324 241 LMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHA 320 (570)
Q Consensus 241 lv~~~~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~ 320 (570)
++..+. ...++|++++||.... + ...++..+.++.. .+.. + .+...+|+++.+++.++..
T Consensus 522 ~~~~~~---~~~~~r~~~~~~~~~~---~-------~~nfv~~~~~~~~-~~~v-p---~~~~~~~~~~~~~~~l~~~-- 581 (668)
T PLN02260 522 LLREYD---NVCTLRVRMPISSDLS---N-------PRNFITKISRYNK-VVNI-P---NSMTVLDELLPISIEMAKR-- 581 (668)
T ss_pred HHHhhh---hheEEEEEEecccCCC---C-------ccHHHHHHhccce-eecc-C---CCceehhhHHHHHHHHHHh--
Confidence 998762 5788899999874321 0 1123333333222 1111 1 2467788899888777642
Q ss_pred CCCCCCceEEecCCCCCcccHHHHHHHHhhhcc
Q 008324 321 KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFT 353 (570)
Q Consensus 321 ~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~ 353 (570)
. .+.+||++++ .++||.|+++.+.+..+
T Consensus 582 ~---~~giyni~~~--~~~s~~e~a~~i~~~~~ 609 (668)
T PLN02260 582 N---LRGIWNFTNP--GVVSHNEILEMYKDYID 609 (668)
T ss_pred C---CCceEEecCC--CcCcHHHHHHHHHHhcC
Confidence 1 1469999998 78999999999988764
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.4e-19 Score=174.58 Aligned_cols=239 Identities=18% Similarity=0.242 Sum_probs=177.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++|-.+-|.|||||+|..++.+|.+.| .+|++--|..+..-..-++- ++ ..++.+
T Consensus 59 ~sGiVaTVFGAtGFlGryvvnklak~G---SQviiPyR~d~~~~r~lkvm----------------Gd------LGQvl~ 113 (391)
T KOG2865|consen 59 VSGIVATVFGATGFLGRYVVNKLAKMG---SQVIIPYRGDEYDPRHLKVM----------------GD------LGQVLF 113 (391)
T ss_pred ccceEEEEecccccccHHHHHHHhhcC---CeEEEeccCCccchhheeec----------------cc------ccceee
Confidence 556678899999999999999999999 77888778654321111100 00 367888
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCC
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~ 169 (570)
..-|+. |+|..+...+..++|||+.|. ++...--...++|+.+.+++.++|+++ ++++|||+|+...+-
T Consensus 114 ~~fd~~-------DedSIr~vvk~sNVVINLIGr-d~eTknf~f~Dvn~~~aerlAricke~-GVerfIhvS~Lganv-- 182 (391)
T KOG2865|consen 114 MKFDLR-------DEDSIRAVVKHSNVVINLIGR-DYETKNFSFEDVNVHIAERLARICKEA-GVERFIHVSCLGANV-- 182 (391)
T ss_pred eccCCC-------CHHHHHHHHHhCcEEEEeecc-ccccCCcccccccchHHHHHHHHHHhh-Chhheeehhhccccc--
Confidence 888888 677777888999999999986 333222234789999999999999998 999999999875331
Q ss_pred CcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccCC
Q 008324 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENL 249 (570)
Q Consensus 170 ~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~l 249 (570)
..++-|-.+|+++|..+++..+
T Consensus 183 --------------------------------------------------------~s~Sr~LrsK~~gE~aVrdafP-- 204 (391)
T KOG2865|consen 183 --------------------------------------------------------KSPSRMLRSKAAGEEAVRDAFP-- 204 (391)
T ss_pred --------------------------------------------------------cChHHHHHhhhhhHHHHHhhCC--
Confidence 1246688999999999998543
Q ss_pred cEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceE
Q 008324 250 SLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIY 329 (570)
Q Consensus 250 p~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iy 329 (570)
..+|+||+.|||..+.-+.-| ..+..- -|-++......++.-..|+|-|||.+|+.|+.+. ...+++|
T Consensus 205 eAtIirPa~iyG~eDrfln~y--------a~~~rk-~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp---~s~Gkty 272 (391)
T KOG2865|consen 205 EATIIRPADIYGTEDRFLNYY--------ASFWRK-FGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDP---DSMGKTY 272 (391)
T ss_pred cceeechhhhcccchhHHHHH--------HHHHHh-cCceeeecCCcceeeccEEEehHHHHHHHhccCc---cccCcee
Confidence 479999999999865322111 112221 2444344344467888999999999999998743 2347899
Q ss_pred EecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 330 HVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 330 ni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
..+++ .-.+..++++++.+..++.|
T Consensus 273 e~vGP--~~yql~eLvd~my~~~~~~~ 297 (391)
T KOG2865|consen 273 EFVGP--DRYQLSELVDIMYDMAREWP 297 (391)
T ss_pred eecCC--chhhHHHHHHHHHHHHhhcc
Confidence 99999 77999999999988877655
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.9e-19 Score=195.24 Aligned_cols=202 Identities=17% Similarity=0.243 Sum_probs=143.2
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|++.| ++|.++.|..... ...+++++.+
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G---~~Vi~ldr~~~~~------------------------------~~~~ve~v~~ 47 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAG---HTVSGIAQHPHDA------------------------------LDPRVDYVCA 47 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC---CEEEEEeCChhhc------------------------------ccCCceEEEc
Confidence 479999999999999999999988 6778888753210 0146788999
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCCcc
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~g~ 172 (570)
|+++ .. ...++.++|+|||+|+.... . ...+|+.|+.+++++|++. ++ ++||+||++ |...
T Consensus 48 Dl~d-------~~-l~~al~~~D~VIHLAa~~~~-~----~~~vNv~Gt~nLleAA~~~-Gv-RiV~~SS~~--G~~~-- 108 (699)
T PRK12320 48 SLRN-------PV-LQELAGEADAVIHLAPVDTS-A----PGGVGITGLAHVANAAARA-GA-RLLFVSQAA--GRPE-- 108 (699)
T ss_pred cCCC-------HH-HHHHhcCCCEEEEcCccCcc-c----hhhHHHHHHHHHHHHHHHc-CC-eEEEEECCC--CCCc--
Confidence 9994 33 34667789999999986421 1 2358999999999999997 66 699999874 3210
Q ss_pred cccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccCCcEE
Q 008324 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLV 252 (570)
Q Consensus 173 i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp~~ 252 (570)
.|. .+|.++.. ..+|++
T Consensus 109 ---------------------------------------------------------~~~----~aE~ll~~--~~~p~~ 125 (699)
T PRK12320 109 ---------------------------------------------------------LYR----QAETLVST--GWAPSL 125 (699)
T ss_pred ---------------------------------------------------------ccc----HHHHHHHh--cCCCEE
Confidence 011 35666655 458999
Q ss_pred EEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEec
Q 008324 253 IIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVG 332 (570)
Q Consensus 253 IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~ 332 (570)
|+|+++|||+...+ .. .+....++..... .....+|||||++++++.++.. . . ..+||++
T Consensus 126 ILR~~nVYGp~~~~----~~-~r~I~~~l~~~~~----------~~pI~vIyVdDvv~alv~al~~--~-~--~GiyNIG 185 (699)
T PRK12320 126 VIRIAPPVGRQLDW----MV-CRTVATLLRSKVS----------ARPIRVLHLDDLVRFLVLALNT--D-R--NGVVDLA 185 (699)
T ss_pred EEeCceecCCCCcc----cH-hHHHHHHHHHHHc----------CCceEEEEHHHHHHHHHHHHhC--C-C--CCEEEEe
Confidence 99999999974321 10 0111222221111 1234469999999999988852 1 1 3499999
Q ss_pred CCCCCcccHHHHHHHHhhh
Q 008324 333 SSLRNPVTLVSILDYGFVY 351 (570)
Q Consensus 333 s~~~~pit~~~l~~~i~~~ 351 (570)
++ +.+|+.++++.+...
T Consensus 186 ~~--~~~Si~el~~~i~~~ 202 (699)
T PRK12320 186 TP--DTTNVVTAWRLLRSV 202 (699)
T ss_pred CC--CeeEHHHHHHHHHHh
Confidence 99 899999998888665
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.81 E-value=9.1e-19 Score=166.18 Aligned_cols=182 Identities=23% Similarity=0.303 Sum_probs=140.7
Q ss_pred EEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccC
Q 008324 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (570)
Q Consensus 15 VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl 94 (570)
|+|+||||++|+.+++.|++++ ++|++++|++.+... ..+++++.+|+
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~---~~V~~~~R~~~~~~~-----------------------------~~~~~~~~~d~ 48 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRG---HEVTALVRSPSKAED-----------------------------SPGVEIIQGDL 48 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT---SEEEEEESSGGGHHH-----------------------------CTTEEEEESCT
T ss_pred eEEECCCChHHHHHHHHHHHCC---CEEEEEecCchhccc-----------------------------ccccccceeee
Confidence 7999999999999999999998 789999998653211 27899999999
Q ss_pred CCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCCcccc
Q 008324 95 SSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLIL 174 (570)
Q Consensus 95 ~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~g~i~ 174 (570)
. +.+.....++++|+|||+++.... +...+++++++|++. +++++|++||+.++....+...
T Consensus 49 ~-------d~~~~~~al~~~d~vi~~~~~~~~----------~~~~~~~~~~a~~~~-~~~~~v~~s~~~~~~~~~~~~~ 110 (183)
T PF13460_consen 49 F-------DPDSVKAALKGADAVIHAAGPPPK----------DVDAAKNIIEAAKKA-GVKRVVYLSSAGVYRDPPGLFS 110 (183)
T ss_dssp T-------CHHHHHHHHTTSSEEEECCHSTTT----------HHHHHHHHHHHHHHT-TSSEEEEEEETTGTTTCTSEEE
T ss_pred h-------hhhhhhhhhhhcchhhhhhhhhcc----------ccccccccccccccc-ccccceeeeccccCCCCCcccc
Confidence 9 555566788899999999986433 177899999999997 8999999999998875443111
Q ss_pred cccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccCCcEEEE
Q 008324 175 ENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLVII 254 (570)
Q Consensus 175 E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp~~Iv 254 (570)
... .+.+..|...|..+|.++.+ .+++++++
T Consensus 111 ~~~-----------------------------------------------~~~~~~~~~~~~~~e~~~~~--~~~~~~iv 141 (183)
T PF13460_consen 111 DED-----------------------------------------------KPIFPEYARDKREAEEALRE--SGLNWTIV 141 (183)
T ss_dssp GGT-----------------------------------------------CGGGHHHHHHHHHHHHHHHH--STSEEEEE
T ss_pred ccc-----------------------------------------------ccchhhhHHHHHHHHHHHHh--cCCCEEEE
Confidence 000 01235688999999999976 59999999
Q ss_pred ecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHH
Q 008324 255 RPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (570)
Q Consensus 255 RPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~ 317 (570)
||+.++|....+ . ..+...+....+.|+++|+|.+++.++.
T Consensus 142 rp~~~~~~~~~~-~---------------------~~~~~~~~~~~~~i~~~DvA~~~~~~l~ 182 (183)
T PF13460_consen 142 RPGWIYGNPSRS-Y---------------------RLIKEGGPQGVNFISREDVAKAIVEALE 182 (183)
T ss_dssp EESEEEBTTSSS-E---------------------EEESSTSTTSHCEEEHHHHHHHHHHHHH
T ss_pred ECcEeEeCCCcc-e---------------------eEEeccCCCCcCcCCHHHHHHHHHHHhC
Confidence 999999986431 0 1111133445589999999999998875
|
... |
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.5e-18 Score=171.88 Aligned_cols=235 Identities=19% Similarity=0.287 Sum_probs=156.0
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
|--++|+|+||||||++|+.+++.|++.+ ++|++++|+..... . . .+. ..++
T Consensus 13 ~~~~~~~ilItGasG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~---~----~------------~~~------~~~~ 64 (251)
T PLN00141 13 ENVKTKTVFVAGATGRTGKRIVEQLLAKG---FAVKAGVRDVDKAK---T----S------------LPQ------DPSL 64 (251)
T ss_pred ccccCCeEEEECCCcHHHHHHHHHHHhCC---CEEEEEecCHHHHH---H----h------------ccc------CCce
Confidence 44567999999999999999999999988 67888898753210 0 0 000 1468
Q ss_pred EEEeccCCCCCCCCCchhhHHHHh-CCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceee
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELW-NELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~ 166 (570)
.++.+|++++ ..+. ...+ .++|+|||+++......+ ...+++|+.|+.++++++++. +++++|++||..++
T Consensus 65 ~~~~~Dl~d~-----~~~l-~~~~~~~~d~vi~~~g~~~~~~~-~~~~~~n~~~~~~ll~a~~~~-~~~~iV~iSS~~v~ 136 (251)
T PLN00141 65 QIVRADVTEG-----SDKL-VEAIGDDSDAVICATGFRRSFDP-FAPWKVDNFGTVNLVEACRKA-GVTRFILVSSILVN 136 (251)
T ss_pred EEEEeeCCCC-----HHHH-HHHhhcCCCEEEECCCCCcCCCC-CCceeeehHHHHHHHHHHHHc-CCCEEEEEcccccc
Confidence 8999999952 1233 3444 589999999886422122 223578999999999999985 78999999999988
Q ss_pred cCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhc
Q 008324 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSK 246 (570)
Q Consensus 167 ~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~ 246 (570)
+...+......|. . . .....|..+|..+|.++++
T Consensus 137 g~~~~~~~~~~~~------~---~-----------------------------------~~~~~~~~~k~~~e~~l~~-- 170 (251)
T PLN00141 137 GAAMGQILNPAYI------F---L-----------------------------------NLFGLTLVAKLQAEKYIRK-- 170 (251)
T ss_pred CCCcccccCcchh------H---H-----------------------------------HHHHHHHHHHHHHHHHHHh--
Confidence 7532211000000 0 0 0112355679999988876
Q ss_pred cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCC
Q 008324 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~ 326 (570)
.+++++++||+.+++... . |... +..........|+.+|+|+++..++.... ...
T Consensus 171 ~gi~~~iirpg~~~~~~~---~------------------~~~~-~~~~~~~~~~~i~~~dvA~~~~~~~~~~~---~~~ 225 (251)
T PLN00141 171 SGINYTIVRPGGLTNDPP---T------------------GNIV-MEPEDTLYEGSISRDQVAEVAVEALLCPE---SSY 225 (251)
T ss_pred cCCcEEEEECCCccCCCC---C------------------ceEE-ECCCCccccCcccHHHHHHHHHHHhcChh---hcC
Confidence 589999999999987531 0 1110 01111112346899999999999885322 124
Q ss_pred ceEEecCCCCCc-ccHHHHHHHHh
Q 008324 327 NIYHVGSSLRNP-VTLVSILDYGF 349 (570)
Q Consensus 327 ~iyni~s~~~~p-it~~~l~~~i~ 349 (570)
.++.+.+...++ .++.+++..+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~ 249 (251)
T PLN00141 226 KVVEIVARADAPKRSYKDLFASIK 249 (251)
T ss_pred cEEEEecCCCCCchhHHHHHHHhh
Confidence 678888755554 88999887765
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.3e-18 Score=171.21 Aligned_cols=235 Identities=16% Similarity=0.155 Sum_probs=152.4
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.|+|||||||||||++++++|++.| .+|+++.|+... .+.+. +.. ..++.++.
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g---~~v~~~~r~~~~---~~~~~-------------~~~--------~~~~~~~~ 54 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARG---DRVAATVRRPDA---LDDLK-------------ARY--------GDRLWVLQ 54 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------Hhc--------cCceEEEE
Confidence 4789999999999999999999988 678888886421 11111 111 24678899
Q ss_pred ccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHHHc---cCc
Q 008324 92 GDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAKKC---VKL 154 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f~-------~~~~~~~~~Nv~gt~~ll~la~~~---~~l 154 (570)
+|++++ +..+.++ .++|+|||+||..... +.++..+++|+.|+.++++.+... .+.
T Consensus 55 ~D~~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~ 127 (276)
T PRK06482 55 LDVTDS-------AAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGG 127 (276)
T ss_pred ccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 999953 3222322 4589999999976431 335667889999999999997321 256
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||...... + +..+.|+.|
T Consensus 128 ~~iv~~sS~~~~~~---------~-----------------------------------------------~~~~~Y~~s 151 (276)
T PRK06482 128 GRIVQVSSEGGQIA---------Y-----------------------------------------------PGFSLYHAT 151 (276)
T ss_pred CEEEEEcCcccccC---------C-----------------------------------------------CCCchhHHH
Confidence 78999998642211 0 123679999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCC--CccccCcc-chHH-HHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPF--PGWVEDLK-TINT-LFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~--~gw~~~~~-~~~~-~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+..|.+++.+ ..+++++++||+.+..+..... ........ .+.. +......|... -+.++
T Consensus 152 K~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~d~ 221 (276)
T PRK06482 152 KWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFA----------IPGDP 221 (276)
T ss_pred HHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCC----------CCCCH
Confidence 99999988765 2489999999998843322100 11111111 1111 11122222111 12468
Q ss_pred HHHHHHHHHHHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhc
Q 008324 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYF 352 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~ 352 (570)
++++++++.++... ..+..||++++ +..+..++++.+.+..
T Consensus 222 ~~~~~a~~~~~~~~----~~~~~~~~g~~--~~~~~~~~~~~~~~~~ 262 (276)
T PRK06482 222 QKMVQAMIASADQT----PAPRRLTLGSD--AYASIRAALSERLAAL 262 (276)
T ss_pred HHHHHHHHHHHcCC----CCCeEEecChH--HHHHHHHHHHHHHHHH
Confidence 99999999987521 12457999998 6777777777665554
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.7e-18 Score=171.94 Aligned_cols=208 Identities=15% Similarity=0.169 Sum_probs=145.8
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
+|+||||||++|++++++|++.| .+|.+++|+..... ..++..+.+|
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g---~~V~~~~R~~~~~~------------------------------~~~~~~~~~d 47 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAAS---VPFLVASRSSSSSA------------------------------GPNEKHVKFD 47 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCC---CcEEEEeCCCcccc------------------------------CCCCcccccc
Confidence 48999999999999999999988 56899999865321 1345667899
Q ss_pred CCCCCCCCCchhhHHHHh------CC-ccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceee
Q 008324 94 ISSEDLGLKDSNLKEELW------NE-LDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 94 l~~~~lgls~~~~~~~l~------~~-vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~ 166 (570)
+. +.+.+...+ ++ +|.|||+++... +. ...+.+++++|++. ++++||++||..++
T Consensus 48 ~~-------d~~~l~~a~~~~~~~~g~~d~v~~~~~~~~-~~---------~~~~~~~i~aa~~~-gv~~~V~~Ss~~~~ 109 (285)
T TIGR03649 48 WL-------DEDTWDNPFSSDDGMEPEISAVYLVAPPIP-DL---------APPMIKFIDFARSK-GVRRFVLLSASIIE 109 (285)
T ss_pred CC-------CHHHHHHHHhcccCcCCceeEEEEeCCCCC-Ch---------hHHHHHHHHHHHHc-CCCEEEEeeccccC
Confidence 98 455555665 56 999999987532 11 23456899999997 99999999986543
Q ss_pred cCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhc
Q 008324 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSK 246 (570)
Q Consensus 167 ~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~ 246 (570)
.... .+...|..+.+.
T Consensus 110 ~~~~---------------------------------------------------------------~~~~~~~~l~~~- 125 (285)
T TIGR03649 110 KGGP---------------------------------------------------------------AMGQVHAHLDSL- 125 (285)
T ss_pred CCCc---------------------------------------------------------------hHHHHHHHHHhc-
Confidence 2100 011224444431
Q ss_pred cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHH-hcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCC
Q 008324 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVAS-AQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~-~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~ 325 (570)
.+++++++||+.++.....+. +. ..+ ..|. .+.+.++...++|+++|+++++..++... ...
T Consensus 126 ~gi~~tilRp~~f~~~~~~~~--~~----------~~~~~~~~--~~~~~g~~~~~~v~~~Dva~~~~~~l~~~---~~~ 188 (285)
T TIGR03649 126 GGVEYTVLRPTWFMENFSEEF--HV----------EAIRKENK--IYSATGDGKIPFVSADDIARVAYRALTDK---VAP 188 (285)
T ss_pred cCCCEEEEeccHHhhhhcccc--cc----------cccccCCe--EEecCCCCccCcccHHHHHHHHHHHhcCC---CcC
Confidence 489999999998875432110 00 001 1122 23455678899999999999999887532 112
Q ss_pred CceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 326 ANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 326 ~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
+++|+++++ .++|+.|+++.+.+.+|+.
T Consensus 189 ~~~~~l~g~--~~~s~~eia~~l~~~~g~~ 216 (285)
T TIGR03649 189 NTDYVVLGP--ELLTYDDVAEILSRVLGRK 216 (285)
T ss_pred CCeEEeeCC--ccCCHHHHHHHHHHHhCCc
Confidence 578999998 8999999999999999874
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.2e-17 Score=164.28 Aligned_cols=228 Identities=15% Similarity=0.123 Sum_probs=147.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||++|||||||+||.+++++|++.| .+|+++.|+.... +++.++ ++.. ..++.+
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~G---~~v~~~~r~~~~~---~~~~~~---------~~~~---------~~~~~~ 60 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARAG---AAVAIADLNQDGA---NAVADE---------INKA---------GGKAIG 60 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CeEEEEeCChHHH---HHHHHH---------HHhc---------CceEEE
Confidence 468999999999999999999999998 5677888865322 111111 1110 245778
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHH----HHHHHHHH-HH
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLG----VIHLVNFA-KK 150 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~g----t~~ll~la-~~ 150 (570)
+.+|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.| +.++++.+ ++
T Consensus 61 ~~~Dl~~-------~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~ 133 (262)
T PRK13394 61 VAMDVTN-------EDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKD 133 (262)
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhh
Confidence 9999995 33333333 348999999997532 13355668899999 66667776 44
Q ss_pred ccCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 151 CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 151 ~~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
. +.+++|++||.+..... +..+.
T Consensus 134 ~-~~~~iv~~ss~~~~~~~--------------------------------------------------------~~~~~ 156 (262)
T PRK13394 134 D-RGGVVIYMGSVHSHEAS--------------------------------------------------------PLKSA 156 (262)
T ss_pred c-CCcEEEEEcchhhcCCC--------------------------------------------------------CCCcc
Confidence 3 67899999996433211 12356
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCC-CCCccccCcc-chHHHHHHHhcCCceeeecCCCeeeeee
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKE-PFPGWVEDLK-TINTLFVASAQGNLRCLVGETKVIMDVI 303 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~e-p~~gw~~~~~-~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
|+.||+..+.+++.+ ..+++++++||+.++++... ..+....... .....+. .++.......+++
T Consensus 157 y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 228 (262)
T PRK13394 157 YVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVK--------KVMLGKTVDGVFT 228 (262)
T ss_pred cHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHH--------HHHhcCCCCCCCC
Confidence 999999888887654 24799999999999986431 1111000000 0001111 1122233456899
Q ss_pred ehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++|++++++.++.... ....+++|++.++
T Consensus 229 ~~~dva~a~~~l~~~~~-~~~~g~~~~~~~g 258 (262)
T PRK13394 229 TVEDVAQTVLFLSSFPS-AALTGQSFVVSHG 258 (262)
T ss_pred CHHHHHHHHHHHcCccc-cCCcCCEEeeCCc
Confidence 99999999998875332 2223678988876
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-16 Score=158.80 Aligned_cols=221 Identities=15% Similarity=0.143 Sum_probs=140.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.++++||||||+||||++++++|++.| .+|+++.|+.... .+.+.++ +.... ...+.+
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g---~~v~~~~r~~~~~--~~~~~~~---------~~~~~--------~~~~~~ 61 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAG---YRVAIHYHRSAAE--ADALAAE---------LNALR--------PGSAAA 61 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCCHHH--HHHHHHH---------HHhhc--------CCceEE
Confidence 467899999999999999999999988 6788888864321 1111111 11110 135788
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCC---c----cccHHHHHHHhHHHHHHHHHHHHHc--cC
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITK---F----DERYDVAFGINTLGVIHLVNFAKKC--VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~---f----~~~~~~~~~~Nv~gt~~ll~la~~~--~~ 153 (570)
+.+|+++ .+....+++ ++|+|||+||... + .+.++..+++|+.|+.++++++... +.
T Consensus 62 ~~~Dl~~-------~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~ 134 (249)
T PRK09135 62 LQADLLD-------PDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ 134 (249)
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC
Confidence 9999994 333333333 5899999999642 1 2345677899999999999999752 11
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
-..++.+|+.. + +.+. ++.+.|+.
T Consensus 135 ~~~~~~~~~~~--~-------~~~~-----------------------------------------------~~~~~Y~~ 158 (249)
T PRK09135 135 RGAIVNITDIH--A-------ERPL-----------------------------------------------KGYPVYCA 158 (249)
T ss_pred CeEEEEEeChh--h-------cCCC-----------------------------------------------CCchhHHH
Confidence 22344444321 1 1111 22467999
Q ss_pred HHHHHHHHHHHh----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHH
Q 008324 234 TKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (570)
Q Consensus 234 sK~~aE~lv~~~----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
||+.+|.+++.+ ..+++++++||+.++|+...+ ++ .. ........+.. + .-..+++|+|
T Consensus 159 sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~--~~----~~--~~~~~~~~~~~--~-------~~~~~~~d~a 221 (249)
T PRK09135 159 AKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGN--SF----DE--EARQAILARTP--L-------KRIGTPEDIA 221 (249)
T ss_pred HHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccc--cC----CH--HHHHHHHhcCC--c-------CCCcCHHHHH
Confidence 999999999865 246999999999999986531 11 11 11111111111 1 1123589999
Q ss_pred HHHHHHHHHhhCCCCCCceEEecCC
Q 008324 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++..++... ....+++||++++
T Consensus 222 ~~~~~~~~~~--~~~~g~~~~i~~g 244 (249)
T PRK09135 222 EAVRFLLADA--SFITGQILAVDGG 244 (249)
T ss_pred HHHHHHcCcc--ccccCcEEEECCC
Confidence 9996665421 1224789999998
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=9.2e-17 Score=162.70 Aligned_cols=236 Identities=13% Similarity=0.113 Sum_probs=152.7
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+|+|+||||||+||++++++|++.| .+|+++.|+.... +.+. +. ...++..+
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g---~~V~~~~r~~~~~---~~~~-------------~~--------~~~~~~~~ 54 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERG---DRVVATARDTATL---ADLA-------------EK--------YGDRLLPL 54 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHH-------------Hh--------ccCCeeEE
Confidence 47899999999999999999999988 6788998875321 1111 11 12467788
Q ss_pred eccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHH----Hcc
Q 008324 91 PGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAK----KCV 152 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~----~~~ 152 (570)
.+|++++ +..+.++ ..+|+|||+||.... .+.++..+++|+.|+..+++.+. +.
T Consensus 55 ~~D~~~~-------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~- 126 (275)
T PRK08263 55 ALDVTDR-------AAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQ- 126 (275)
T ss_pred EccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-
Confidence 9999953 3222322 368999999997643 14567789999999988887763 32
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+.+++|++||........ ....|+
T Consensus 127 ~~~~iv~vsS~~~~~~~~--------------------------------------------------------~~~~Y~ 150 (275)
T PRK08263 127 RSGHIIQISSIGGISAFP--------------------------------------------------------MSGIYH 150 (275)
T ss_pred CCCEEEEEcChhhcCCCC--------------------------------------------------------CccHHH
Confidence 567899999976554221 125699
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeee-eehH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDV-IPVD 306 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~-VpVD 306 (570)
.||+..|.+.+.+ ..+++++++||+.+.++...+.............+......+ .....+ +.++
T Consensus 151 ~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~p~ 221 (275)
T PRK08263 151 ASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQ---------WSERSVDGDPE 221 (275)
T ss_pred HHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHH---------HHhccCCCCHH
Confidence 9999988887654 358999999999987765432111111111111111111111 011233 7789
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhh
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVY 351 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~ 351 (570)
|++++++.++... . . .++.|+.+.+ .++++.++.+.+.++
T Consensus 222 dva~~~~~l~~~~-~-~-~~~~~~~~~~--~~~~~~~~~~~~~~~ 261 (275)
T PRK08263 222 AAAEALLKLVDAE-N-P-PLRLFLGSGV--LDLAKADYERRLATW 261 (275)
T ss_pred HHHHHHHHHHcCC-C-C-CeEEEeCchH--HHHHHHHHHHHHHHH
Confidence 9999999988632 1 1 1344443333 578888888877764
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.1e-16 Score=159.61 Aligned_cols=233 Identities=14% Similarity=0.107 Sum_probs=146.0
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+||||||||+||+.++++|++.| .+|+++.|+.... +++.++ +.. ...++..+.
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g---~~v~~~~r~~~~~---~~~~~~---------~~~---------~~~~~~~~~ 56 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAG---ANVVVNDLGEAGA---EAAAKV---------ATD---------AGGSVIYLV 56 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHH---------HHh---------cCCceEEEE
Confidence 5789999999999999999999988 5789999974321 222211 110 024688999
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---cCceEEEEEe
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHVS 161 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~l~~~V~vS 161 (570)
+|+++++.-....+.......++|+|||+|+.... .+.++..+++|+.|+..+++.+... .+.+++|++|
T Consensus 57 ~D~~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~s 136 (255)
T TIGR01963 57 ADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIA 136 (255)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 99995320000000112233568999999987532 1234566789999998888877421 2678999999
Q ss_pred cceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHH
Q 008324 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (570)
Q Consensus 162 Ta~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~l 241 (570)
|....... +....|+.+|...|.+
T Consensus 137 s~~~~~~~--------------------------------------------------------~~~~~y~~sk~a~~~~ 160 (255)
T TIGR01963 137 SAHGLVAS--------------------------------------------------------PFKSAYVAAKHGLIGL 160 (255)
T ss_pred chhhcCCC--------------------------------------------------------CCCchhHHHHHHHHHH
Confidence 87543321 1125699999988888
Q ss_pred HHHh-----ccCCcEEEEecCceecCCCC-CCC-ccc-cCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHH
Q 008324 242 MQQS-----KENLSLVIIRPTVVSGTYKE-PFP-GWV-EDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (570)
Q Consensus 242 v~~~-----~~~lp~~IvRPsiV~g~~~e-p~~-gw~-~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii 313 (570)
++.+ ..+++++++||+.++++... .++ .+. .+... ...+. .....+....++++++|+|++++
T Consensus 161 ~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~-~~~~~--------~~~~~~~~~~~~~~~~d~a~~~~ 231 (255)
T TIGR01963 161 TKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPE-EQVIR--------EVMLPGQPTKRFVTVDEVAETAL 231 (255)
T ss_pred HHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCc-hHHHH--------HHHHccCccccCcCHHHHHHHHH
Confidence 7654 24799999999999886421 000 000 00000 00000 00112334567999999999999
Q ss_pred HHHHHhhCCCCCCceEEecCC
Q 008324 314 VAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 314 ~a~~~~~~~~~~~~iyni~s~ 334 (570)
.++.... ....+++|+++++
T Consensus 232 ~~~~~~~-~~~~g~~~~~~~g 251 (255)
T TIGR01963 232 FLASDAA-AGITGQAIVLDGG 251 (255)
T ss_pred HHcCccc-cCccceEEEEcCc
Confidence 9886321 2223678999876
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.9e-16 Score=156.15 Aligned_cols=221 Identities=14% Similarity=0.100 Sum_probs=148.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||++|++++++|++.| .+|+++.|+..... ... +.+++. ..++.+
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g---~~V~~~~r~~~~~~---~~~---------~~l~~~---------~~~~~~ 59 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADG---AEVIVVDICGDDAA---ATA---------ELVEAA---------GGKARA 59 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCC---CEEEEEeCCHHHHH---HHH---------HHHHhc---------CCeEEE
Confidence 468999999999999999999999998 57899999753211 111 111111 245888
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|+++ .+..+.++ ..+|+|||+|+.... .+.+...+++|+.|+.++++.+... .
T Consensus 60 ~~~Dl~~-------~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 132 (251)
T PRK12826 60 RQVDVRD-------RAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRA 132 (251)
T ss_pred EECCCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 9999994 33333443 368999999988653 1345667899999999999987531 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+.++||++||....... . +....|+
T Consensus 133 ~~~~ii~~ss~~~~~~~--------~-----------------------------------------------~~~~~y~ 157 (251)
T PRK12826 133 GGGRIVLTSSVAGPRVG--------Y-----------------------------------------------PGLAHYA 157 (251)
T ss_pred CCcEEEEEechHhhccC--------C-----------------------------------------------CCccHHH
Confidence 56789999997544110 0 1134699
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+.+|.+++.+ ..+++++++||+.++|+...+... ..+...+..+. + ...+++++|
T Consensus 158 ~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~--------~~~~~~~~~~~----~-----~~~~~~~~d 220 (251)
T PRK12826 158 ASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGD--------AQWAEAIAAAI----P-----LGRLGEPED 220 (251)
T ss_pred HHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCc--------hHHHHHHHhcC----C-----CCCCcCHHH
Confidence 9999999988765 247999999999999975432211 00011111111 1 114789999
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++++..++... .....+++|++.+|
T Consensus 221 va~~~~~l~~~~-~~~~~g~~~~~~~g 246 (251)
T PRK12826 221 IAAAVLFLASDE-ARYITGQTLPVDGG 246 (251)
T ss_pred HHHHHHHHhCcc-ccCcCCcEEEECCC
Confidence 999998876422 11224789999876
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.2e-16 Score=170.96 Aligned_cols=246 Identities=17% Similarity=0.154 Sum_probs=157.2
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
+.+.|++||||||||+||++++++|++.| .+|.+++|+.... +++.+++-+.. +... +. ....++
T Consensus 76 ~~~~gKvVLVTGATGgIG~aLAr~LLk~G---~~Vval~Rn~ekl---~~l~~~l~~~~----L~~~-Ga----~~~~~v 140 (576)
T PLN03209 76 DTKDEDLAFVAGATGKVGSRTVRELLKLG---FRVRAGVRSAQRA---ESLVQSVKQMK----LDVE-GT----QPVEKL 140 (576)
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCC---CeEEEEeCCHHHH---HHHHHHhhhhc----cccc-cc----cccCce
Confidence 45689999999999999999999999998 6788899975432 12111110000 0000 00 002468
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc-ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceee
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~-~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~ 166 (570)
.++.+|++ +.+.....+.++|+|||+||..... ..+...+++|+.|+.+++++|++. ++++||++||..++
T Consensus 141 ~iV~gDLt-------D~esI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~a-gVgRIV~VSSiga~ 212 (576)
T PLN03209 141 EIVECDLE-------KPDQIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVA-KVNHFILVTSLGTN 212 (576)
T ss_pred EEEEecCC-------CHHHHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHh-CCCEEEEEccchhc
Confidence 89999999 4444557788999999999875321 134566889999999999999986 88999999998653
Q ss_pred cCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhc
Q 008324 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSK 246 (570)
Q Consensus 167 ~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~ 246 (570)
.. +. .+..+ ..-..|...|..+|..+..
T Consensus 213 ~~--g~-p~~~~-----------------------------------------------~sk~~~~~~KraaE~~L~~-- 240 (576)
T PLN03209 213 KV--GF-PAAIL-----------------------------------------------NLFWGVLCWKRKAEEALIA-- 240 (576)
T ss_pred cc--Cc-cccch-----------------------------------------------hhHHHHHHHHHHHHHHHHH--
Confidence 11 00 00000 0113477788899988876
Q ss_pred cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCC
Q 008324 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~ 326 (570)
.+++++|||||.+.++..+. ... +.......+ ......+.-+|||++++.++.+... ..+
T Consensus 241 sGIrvTIVRPG~L~tp~d~~----~~t-------------~~v~~~~~d-~~~gr~isreDVA~vVvfLasd~~a--s~~ 300 (576)
T PLN03209 241 SGLPYTIVRPGGMERPTDAY----KET-------------HNLTLSEED-TLFGGQVSNLQVAELMACMAKNRRL--SYC 300 (576)
T ss_pred cCCCEEEEECCeecCCcccc----ccc-------------cceeecccc-ccCCCccCHHHHHHHHHHHHcCchh--ccc
Confidence 68999999999998753321 000 001111111 1112347889999999988863221 236
Q ss_pred ceEEecCCCCCc-ccHHHHHHHH
Q 008324 327 NIYHVGSSLRNP-VTLVSILDYG 348 (570)
Q Consensus 327 ~iyni~s~~~~p-it~~~l~~~i 348 (570)
+++.+.++...+ ..+.++++.+
T Consensus 301 kvvevi~~~~~p~~~~~~~~~~i 323 (576)
T PLN03209 301 KVVEVIAETTAPLTPMEELLAKI 323 (576)
T ss_pred eEEEEEeCCCCCCCCHHHHHHhc
Confidence 789988873222 3455555443
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.7e-17 Score=161.87 Aligned_cols=226 Identities=17% Similarity=0.191 Sum_probs=148.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+.+|+|+||||||+||.++++.|++.| .+|+++.|+.... +++.++ ...++..
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G---~~v~~~~r~~~~~---~~~~~~---------------------~~~~~~~ 56 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEG---ARVVIADIKPARA---RLAALE---------------------IGPAAIA 56 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcC---CEEEEEcCCHHHH---HHHHHH---------------------hCCceEE
Confidence 568999999999999999999999998 6788888864321 111111 0245788
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc--c-
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--V- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~--~- 152 (570)
+.+|++++ +..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 57 ~~~D~~~~-------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 129 (257)
T PRK07067 57 VSLDVTRQ-------DSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQ 129 (257)
T ss_pred EEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhc
Confidence 99999953 3333333 368999999997532 1346677999999999999998642 1
Q ss_pred -CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 153 -KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 153 -~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.-.++|++||....... +....|
T Consensus 130 ~~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y 153 (257)
T PRK07067 130 GRGGKIINMASQAGRRGE--------------------------------------------------------ALVSHY 153 (257)
T ss_pred CCCcEEEEeCCHHhCCCC--------------------------------------------------------CCCchh
Confidence 12479999986321110 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCcc-chHHHHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLK-TINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~-~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
+.||+..+.+++.. ..+++++++||+.|.++..+.......... ...+.. ....+.......+.++
T Consensus 154 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~ 225 (257)
T PRK07067 154 CATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEK--------KRLVGEAVPLGRMGVP 225 (257)
T ss_pred hhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHH--------HHHHhhcCCCCCccCH
Confidence 99999998888754 458999999999999864321100000000 000000 0111222234578899
Q ss_pred HHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|+|++++.++..... ...+++|++.++
T Consensus 226 ~dva~~~~~l~s~~~~-~~~g~~~~v~gg 253 (257)
T PRK07067 226 DDLTGMALFLASADAD-YIVAQTYNVDGG 253 (257)
T ss_pred HHHHHHHHHHhCcccc-cccCcEEeecCC
Confidence 9999999988853222 223789999887
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.5e-16 Score=152.57 Aligned_cols=219 Identities=16% Similarity=0.171 Sum_probs=146.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++|+++|++.| .+|.++.|+.... .+.+.++ +.. ...++.+
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g---~~v~~~~~~~~~~--~~~~~~~---------~~~---------~~~~~~~ 60 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAG---ADVVVHYRSDEEA--AEELVEA---------VEA---------LGRRAQA 60 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeCCCHHH--HHHHHHH---------HHh---------cCCceEE
Confidence 457899999999999999999999998 4566666654321 1111111 110 1256889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHH----Hc
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAK----KC 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~----~~ 151 (570)
+.+|++++ +....++ .++|+|||+||.... .+.+...+++|+.|+.++++.+. +.
T Consensus 61 ~~~D~~~~-------~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 133 (249)
T PRK12825 61 VQADVTDK-------AALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQ 133 (249)
T ss_pred EECCcCCH-------HHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 99999953 3333333 468999999996532 23356678999999999998874 33
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+.++||++||...+... .....|
T Consensus 134 -~~~~~i~~SS~~~~~~~--------------------------------------------------------~~~~~y 156 (249)
T PRK12825 134 -RGGRIVNISSVAGLPGW--------------------------------------------------------PGRSNY 156 (249)
T ss_pred -CCCEEEEECccccCCCC--------------------------------------------------------CCchHH
Confidence 57899999997655321 112569
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.+|+..|.++..+ ..+++++++||+.++++...+.. . ...... .. ......+++++
T Consensus 157 ~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~-------~-~~~~~~-~~---------~~~~~~~~~~~ 218 (249)
T PRK12825 157 AAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATI-------E-EAREAK-DA---------ETPLGRSGTPE 218 (249)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCcccccc-------c-hhHHhh-hc---------cCCCCCCcCHH
Confidence 99999999888654 25899999999999997643210 0 010100 00 00122378999
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+++++..++... .....+++|+++++
T Consensus 219 dva~~~~~~~~~~-~~~~~g~~~~i~~g 245 (249)
T PRK12825 219 DIARAVAFLCSDA-SDYITGQVIEVTGG 245 (249)
T ss_pred HHHHHHHHHhCcc-ccCcCCCEEEeCCC
Confidence 9999998887432 22234789999987
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.7e-16 Score=157.16 Aligned_cols=228 Identities=14% Similarity=0.101 Sum_probs=144.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++|++|+||||||+||++++++|++.| .+|+++.|+.... +++..++ +. ...++..
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g---~~v~~~~r~~~~~---~~~~~~~---------~~---------~~~~~~~ 57 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEG---AKVVIADLNDEAA---AAAAEAL---------QK---------AGGKAIG 57 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEeCCHHHH---HHHHHHH---------Hh---------cCCcEEE
Confidence 468999999999999999999999988 6788888875432 1221111 11 0257888
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHH----HHc
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFA----KKC 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f~-------~~~~~~~~~Nv~gt~~ll~la----~~~ 151 (570)
+.+|++++ +....++ ..+|+|||+|+..... +.++..+++|+.|+.++++.+ ++.
T Consensus 58 ~~~Dl~~~-------~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 130 (258)
T PRK12429 58 VAMDVTDE-------EAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQ 130 (258)
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc
Confidence 99999953 3333333 3689999999875431 234556789999966555544 443
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+.++||++||....... ...+.|
T Consensus 131 -~~~~iv~iss~~~~~~~--------------------------------------------------------~~~~~y 153 (258)
T PRK12429 131 -GGGRIINMASVHGLVGS--------------------------------------------------------AGKAAY 153 (258)
T ss_pred -CCeEEEEEcchhhccCC--------------------------------------------------------CCcchh
Confidence 67899999987544321 113568
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCC-CccccCcc-chHHHHHHHhcCCceeeecCCCeeeeeee
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPF-PGWVEDLK-TINTLFVASAQGNLRCLVGETKVIMDVIP 304 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~-~gw~~~~~-~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
+.+|+..+.+.+.+ ..++.+.++||+.+.++...+. +.-..... ........ .+.......++++
T Consensus 154 ~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 225 (258)
T PRK12429 154 VSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLED--------VLLPLVPQKRFTT 225 (258)
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHH--------HHhccCCccccCC
Confidence 88888888776644 3479999999999998654210 00000000 00011111 1111223356999
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++|+|+++..++..... .-.+++|++.++
T Consensus 226 ~~d~a~~~~~l~~~~~~-~~~g~~~~~~~g 254 (258)
T PRK12429 226 VEEIADYALFLASFAAK-GVTGQAWVVDGG 254 (258)
T ss_pred HHHHHHHHHHHcCcccc-CccCCeEEeCCC
Confidence 99999999888753222 123678998876
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.2e-16 Score=162.18 Aligned_cols=234 Identities=14% Similarity=0.109 Sum_probs=143.9
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+++||||||++|++++++|++.| .+|+++.|+...... +.+++ ... . ...++.++
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G---~~V~~~~r~~~~~~~---~~~~~---------~~~-~------~~~~~~~~ 59 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKG---YLVIATMRNPEKQEN---LLSQA---------TQL-N------LQQNIKVQ 59 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCC---CEEEEEeCCHHHHHH---HHHHH---------Hhc-C------CCCceeEE
Confidence 57899999999999999999999998 678888887533211 11110 100 0 12478899
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---cCceEEEEE
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHV 160 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~l~~~V~v 160 (570)
.+|+++++.-.. .+........+|+|||+|+.... .+.++..+++|+.|+.++++.+... .+..++|++
T Consensus 60 ~~D~~d~~~~~~-~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~v 138 (280)
T PRK06914 60 QLDVTDQNSIHN-FQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINI 138 (280)
T ss_pred ecCCCCHHHHHH-HHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 999996421000 00011122468999999987532 1345667889999999998886321 256789999
Q ss_pred ecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHH
Q 008324 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (570)
Q Consensus 161 STa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~ 240 (570)
||....... +....|+.||+..|.
T Consensus 139 sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~~~~~ 162 (280)
T PRK06914 139 SSISGRVGF--------------------------------------------------------PGLSPYVSSKYALEG 162 (280)
T ss_pred CcccccCCC--------------------------------------------------------CCCchhHHhHHHHHH
Confidence 986432211 123569999999999
Q ss_pred HHHHh-----ccCCcEEEEecCceecCCCCCCCccccC---ccch-HHHHHHHhcCCceeeecCCCeeeeeeehHHHHHH
Q 008324 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVED---LKTI-NTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (570)
Q Consensus 241 lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~---~~~~-~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~a 311 (570)
+++.+ ..+++++++||+.+.++..++....... .... ...+.... ... ......+++++|+|.+
T Consensus 163 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~dva~~ 235 (280)
T PRK06914 163 FSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQ----KHI---NSGSDTFGNPIDVANL 235 (280)
T ss_pred HHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHH----HHH---hhhhhccCCHHHHHHH
Confidence 88765 3489999999999988743321110000 0000 01111110 000 0112346789999999
Q ss_pred HHHHHHHhhCCCCCCceEEecCC
Q 008324 312 MIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++.++.+.. . ...|+++++
T Consensus 236 ~~~~~~~~~--~--~~~~~~~~~ 254 (280)
T PRK06914 236 IVEIAESKR--P--KLRYPIGKG 254 (280)
T ss_pred HHHHHcCCC--C--CcccccCCc
Confidence 999986321 1 246888876
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.3e-16 Score=154.91 Aligned_cols=221 Identities=17% Similarity=0.174 Sum_probs=143.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEE-EcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF-VRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~l-vR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+++++|+||||||+||.++++.|++.| .+|.++ .|+... .+... +.+... ..++.
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G---~~v~i~~~r~~~~---~~~~~---------~~~~~~---------~~~~~ 59 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDG---ALVAIHYGRNKQA---ADETI---------REIESN---------GGKAF 59 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCCHHH---HHHHH---------HHHHhc---------CCcEE
Confidence 468999999999999999999999998 455554 454321 11111 111110 24678
Q ss_pred EEeccCCCCCCCCCchhhHHHHhC-------------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHH
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWN-------------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFA 148 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la 148 (570)
++.+|++++ +....+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+
T Consensus 60 ~~~~D~~d~-------~~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 132 (254)
T PRK12746 60 LIEADLNSI-------DGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQT 132 (254)
T ss_pred EEEcCcCCH-------HHHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 899999953 32223222 58999999987432 1224666889999999999998
Q ss_pred HHc-cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCC
Q 008324 149 KKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (570)
Q Consensus 149 ~~~-~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 227 (570)
.+. .+..++|++||..++.... .
T Consensus 133 ~~~~~~~~~~v~~sS~~~~~~~~--------------------------------------------------------~ 156 (254)
T PRK12746 133 LPLLRAEGRVINISSAEVRLGFT--------------------------------------------------------G 156 (254)
T ss_pred HHHhhcCCEEEEECCHHhcCCCC--------------------------------------------------------C
Confidence 763 3445899999986643211 1
Q ss_pred CchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeee
Q 008324 228 PNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDV 302 (570)
Q Consensus 228 ~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
...|+.||+..|.+++.+ ..++++++++|+.+.++...... .. ..+.....+. .....+
T Consensus 157 ~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~---~~-----~~~~~~~~~~--------~~~~~~ 220 (254)
T PRK12746 157 SIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLL---DD-----PEIRNFATNS--------SVFGRI 220 (254)
T ss_pred CcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhc---cC-----hhHHHHHHhc--------CCcCCC
Confidence 356999999999987655 34799999999999886542110 00 1111111111 112356
Q ss_pred eehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++|+++++..++.... ..-.+++|++.++
T Consensus 221 ~~~~dva~~~~~l~~~~~-~~~~g~~~~i~~~ 251 (254)
T PRK12746 221 GQVEDIADAVAFLASSDS-RWVTGQIIDVSGG 251 (254)
T ss_pred CCHHHHHHHHHHHcCccc-CCcCCCEEEeCCC
Confidence 789999999987765321 2223679999876
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.4e-15 Score=154.02 Aligned_cols=238 Identities=17% Similarity=0.208 Sum_probs=154.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||.++++.|++.| .+|+++.|+.... +.+.+++ .... ...++.+
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~~l---------~~~~-------~~~~~~~ 62 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAAG---AAVMIVGRNPDKL---AAAAEEI---------EALK-------GAGAVRY 62 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CeEEEEeCCHHHH---HHHHHHH---------Hhcc-------CCCceEE
Confidence 678999999999999999999999998 5788888864321 1111111 1100 0246788
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHHc---
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f--------~~~~~~~~~~Nv~gt~~ll~la~~~--- 151 (570)
+.+|++++ +..+.+++ .+|+|||+||.... .+.+...+++|+.|+..+++.+.+.
T Consensus 63 ~~~Dl~~~-------~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 135 (276)
T PRK05875 63 EPADVTDE-------DQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVR 135 (276)
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 99999953 33333333 68999999985421 1235667889999999999877542
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.++|++||..+.... +..+.|
T Consensus 136 ~~~g~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y 159 (276)
T PRK05875 136 GGGGSFVGISSIAASNTH--------------------------------------------------------RWFGAY 159 (276)
T ss_pred cCCcEEEEEechhhcCCC--------------------------------------------------------CCCcch
Confidence 133589999997653211 123679
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..|.+++.+ ..+++++++||+.+.++...+. .. . .........+. ....++.++
T Consensus 160 ~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~---~~---~-~~~~~~~~~~~---------~~~~~~~~~ 223 (276)
T PRK05875 160 GVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPI---TE---S-PELSADYRACT---------PLPRVGEVE 223 (276)
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccc---cc---C-HHHHHHHHcCC---------CCCCCcCHH
Confidence 99999999999865 3478999999999876543210 00 0 11111111111 112356799
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCCCCCcc----cHHHHHHHHhhh
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPV----TLVSILDYGFVY 351 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~~~~pi----t~~~l~~~i~~~ 351 (570)
|+|+++..++.... ..-.+++|+++++ ..+ +..++++.+...
T Consensus 224 dva~~~~~l~~~~~-~~~~g~~~~~~~g--~~~~~~~~~~~~~~~~~~~ 269 (276)
T PRK05875 224 DVANLAMFLLSDAA-SWITGQVINVDGG--HMLRRGPDFSSMLEPVFGA 269 (276)
T ss_pred HHHHHHHHHcCchh-cCcCCCEEEECCC--eeccCCccHHHHHHHHhhH
Confidence 99999998875332 2223689999987 344 677777666544
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.1e-15 Score=148.91 Aligned_cols=217 Identities=18% Similarity=0.180 Sum_probs=145.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||||+||++++++|++.| .+|+++.|+.... +++.++ ++.. ..++..
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g---~~vi~~~r~~~~~---~~~~~~---------~~~~---------~~~~~~ 59 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREG---ASVVVADINAEGA---ERVAKQ---------IVAD---------GGTAIA 59 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHH---------HHhc---------CCcEEE
Confidence 478999999999999999999999998 5788888865322 222211 1110 135678
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCC------c-c---ccHHHHHHHhHHHHHHHHHHHHHc-
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK------F-D---ERYDVAFGINTLGVIHLVNFAKKC- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~------f-~---~~~~~~~~~Nv~gt~~ll~la~~~- 151 (570)
+.+|++++ +..+.+. ..+|+|||+||... + + +.++..+++|+.|+.++++++...
T Consensus 60 ~~~Dl~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 132 (250)
T PRK07774 60 VQVDVSDP-------DSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHM 132 (250)
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 89999953 3222222 35899999999742 1 1 234566889999999999998763
Q ss_pred --cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc
Q 008324 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (570)
Q Consensus 152 --~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
.+.+++|++||..++. ..+
T Consensus 133 ~~~~~~~iv~~sS~~~~~-----------------------------------------------------------~~~ 153 (250)
T PRK07774 133 AKRGGGAIVNQSSTAAWL-----------------------------------------------------------YSN 153 (250)
T ss_pred HHhCCcEEEEEecccccC-----------------------------------------------------------Ccc
Confidence 1346899999976532 124
Q ss_pred hHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeee
Q 008324 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (570)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.|+.||+..|.+++.+ ..++++++++|+.+.++..... .+..+.....++.... -+..
T Consensus 154 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~--------~~~~~~~~~~~~~~~~---------~~~~ 216 (250)
T PRK07774 154 FYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTV--------TPKEFVADMVKGIPLS---------RMGT 216 (250)
T ss_pred ccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCcccccc--------CCHHHHHHHHhcCCCC---------CCcC
Confidence 6999999999998765 2479999999998876643211 1112222223322111 1346
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++|+|++++.++.... ....+++|++.++
T Consensus 217 ~~d~a~~~~~~~~~~~-~~~~g~~~~v~~g 245 (250)
T PRK07774 217 PEDLVGMCLFLLSDEA-SWITGQIFNVDGG 245 (250)
T ss_pred HHHHHHHHHHHhChhh-hCcCCCEEEECCC
Confidence 7999999988875322 1123789999887
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.8e-15 Score=150.53 Aligned_cols=225 Identities=15% Similarity=0.155 Sum_probs=146.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++++||||||+||++++++|++.| .+|+++.|+... .+++.+++ +. ...++.+
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g---~~v~~~~r~~~~---~~~~~~~~---------~~---------~~~~~~~ 56 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEG---AKVAVFDLNREA---AEKVAADI---------RA---------KGGNAQA 56 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEecCCHHH---HHHHHHHH---------Hh---------cCCcEEE
Confidence 468999999999999999999999988 577888886532 12222111 11 0246888
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCC---c----cccHHHHHHHhHHHHHHHHHHHHH-c--c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK---F----DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~---f----~~~~~~~~~~Nv~gt~~ll~la~~-~--~ 152 (570)
+.+|+++ .+..+.++ .++|+|||+|+... + .+.++..+++|+.|+.++++.+.. + .
T Consensus 57 ~~~d~~~-------~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 129 (250)
T TIGR03206 57 FACDITD-------RDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVER 129 (250)
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 9999994 33333333 35899999998642 1 123456789999999999887753 1 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+.... ....|+
T Consensus 130 ~~~~ii~iss~~~~~~~~--------------------------------------------------------~~~~Y~ 153 (250)
T TIGR03206 130 GAGRIVNIASDAARVGSS--------------------------------------------------------GEAVYA 153 (250)
T ss_pred CCeEEEEECchhhccCCC--------------------------------------------------------CCchHH
Confidence 567899999976654321 124699
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.+|+..+.+++.+ ..+++++++||+.++++......++.. .+..++..+..... ...+...+|
T Consensus 154 ~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~---------~~~~~~~~d 221 (250)
T TIGR03206 154 ACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAE---NPEKLREAFTRAIP---------LGRLGQPDD 221 (250)
T ss_pred HHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccC---ChHHHHHHHHhcCC---------ccCCcCHHH
Confidence 9998888877655 247999999999998875432222211 11112222222111 112345689
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|+++..++.... ..-.++++++.++
T Consensus 222 va~~~~~l~~~~~-~~~~g~~~~~~~g 247 (250)
T TIGR03206 222 LPGAILFFSSDDA-SFITGQVLSVSGG 247 (250)
T ss_pred HHHHHHHHcCccc-CCCcCcEEEeCCC
Confidence 9999998875322 2223688988765
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1e-15 Score=143.34 Aligned_cols=245 Identities=16% Similarity=0.136 Sum_probs=171.9
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|||||+||.+|++|.+.+...+++-.. .+++- .-..
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~-wvf~~-----------------------------------------skd~ 39 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDDEN-WVFIG-----------------------------------------SKDA 39 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCCcc-eEEec-----------------------------------------cccc
Confidence 78999999999999999999987742111 11111 1146
Q ss_pred cCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCc----cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceee
Q 008324 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF----DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f----~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~ 166 (570)
|+++ .++ .+.+++ +...|||+||.|.. ....-+.+..|+.---|++..|.+. +++++|.+.|..++
T Consensus 40 DLt~------~a~-t~~lF~~ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~-gv~K~vsclStCIf 111 (315)
T KOG1431|consen 40 DLTN------LAD-TRALFESEKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEH-GVKKVVSCLSTCIF 111 (315)
T ss_pred cccc------hHH-HHHHHhccCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHh-chhhhhhhcceeec
Confidence 7774 233 346665 58999999998842 2223456899999999999999997 99999999888888
Q ss_pred cCCCc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008324 167 GERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (570)
Q Consensus 167 ~~~~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (570)
.+... .|+|......+ +.+..-.|++.|.++.-.-+.|
T Consensus 112 Pdkt~yPIdEtmvh~gp-----------------------------------------phpsN~gYsyAKr~idv~n~aY 150 (315)
T KOG1431|consen 112 PDKTSYPIDETMVHNGP-----------------------------------------PHPSNFGYSYAKRMIDVQNQAY 150 (315)
T ss_pred CCCCCCCCCHHHhccCC-----------------------------------------CCCCchHHHHHHHHHHHHHHHH
Confidence 76432 33333221100 0111126999999988777666
Q ss_pred --ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHH----hcCC-ceeeecCCCeeeeeeehHHHHHHHHHHHHH
Q 008324 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVAS----AQGN-LRCLVGETKVIMDVIPVDMVVNAMIVAMVA 318 (570)
Q Consensus 246 --~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~----~~G~-~~~~~~~~~~~~d~VpVDdva~aii~a~~~ 318 (570)
..+...+.+-|++||||.+.--| ++-.-..+++..+ ..|. ...++|.+...+.|+|+||+|++++..+..
T Consensus 151 ~~qhg~~~tsviPtNvfGphDNfnp---e~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~vlr~ 227 (315)
T KOG1431|consen 151 RQQHGRDYTSVIPTNVFGPHDNFNP---ENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWVLRE 227 (315)
T ss_pred HHHhCCceeeeccccccCCCCCCCc---ccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHHHHh
Confidence 56889999999999998763211 2223344444433 3343 557889999999999999999999998863
Q ss_pred hhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 319 HAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 319 ~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
-.. .+-.+++++....+|..|+++.+.+.++-.
T Consensus 228 Y~~----vEpiils~ge~~EVtI~e~aeaV~ea~~F~ 260 (315)
T KOG1431|consen 228 YEG----VEPIILSVGESDEVTIREAAEAVVEAVDFT 260 (315)
T ss_pred hcC----ccceEeccCccceeEHHHHHHHHHHHhCCC
Confidence 322 344678888667999999999999988754
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=7e-16 Score=153.47 Aligned_cols=225 Identities=17% Similarity=0.125 Sum_probs=144.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++|||||||||++++++|++.| .+|+++.|+... ..+.+.++ ++.. ..++..
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G---~~V~~~~r~~~~--~~~~~~~~---------l~~~---------~~~~~~ 60 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAG---AHVVVNYRQKAP--RANKVVAE---------IEAA---------GGRASA 60 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCC---CEEEEEeCCchH--hHHHHHHH---------HHhc---------CCceEE
Confidence 468999999999999999999999988 577888886432 11222211 1110 246788
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHc-cCceEEEEE
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHV 160 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~-~~l~~~V~v 160 (570)
+.+|++++ +....++ .++|+|||+|+.... ...+...+++|+.|+.++++.+.+. ..-.++|++
T Consensus 61 ~~~D~~~~-------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~i 133 (248)
T PRK07806 61 VGADLTDE-------ESVAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFV 133 (248)
T ss_pred EEcCCCCH-------HHHHHHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEE
Confidence 99999954 3222333 358999999986422 2234556889999999999999863 233589999
Q ss_pred ecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHH
Q 008324 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (570)
Q Consensus 161 STa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~ 240 (570)
||........ . ... +....|+.||+.+|.
T Consensus 134 sS~~~~~~~~---~-~~~-----------------------------------------------~~~~~Y~~sK~a~e~ 162 (248)
T PRK07806 134 TSHQAHFIPT---V-KTM-----------------------------------------------PEYEPVARSKRAGED 162 (248)
T ss_pred eCchhhcCcc---c-cCC-----------------------------------------------ccccHHHHHHHHHHH
Confidence 9853321100 0 000 113579999999999
Q ss_pred HHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHH
Q 008324 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (570)
Q Consensus 241 lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a 315 (570)
+++.+ ..++++++++|+.+-++....+. .. ...+.+.. .+ ....++++++|+|++++.+
T Consensus 163 ~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~---~~--~~~~~~~~-----~~------~~~~~~~~~~dva~~~~~l 226 (248)
T PRK07806 163 ALRALRPELAEKGIGFVVVSGDMIEGTVTATLL---NR--LNPGAIEA-----RR------EAAGKLYTVSEFAAEVARA 226 (248)
T ss_pred HHHHHHHHhhccCeEEEEeCCccccCchhhhhh---cc--CCHHHHHH-----HH------hhhcccCCHHHHHHHHHHH
Confidence 98875 35789999998877654321100 00 00000000 00 0123689999999999998
Q ss_pred HHHhhCCCCCCceEEecCC
Q 008324 316 MVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 316 ~~~~~~~~~~~~iyni~s~ 334 (570)
+... ...+++|+++++
T Consensus 227 ~~~~---~~~g~~~~i~~~ 242 (248)
T PRK07806 227 VTAP---VPSGHIEYVGGA 242 (248)
T ss_pred hhcc---ccCccEEEecCc
Confidence 8622 123789999987
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.5e-15 Score=148.38 Aligned_cols=219 Identities=15% Similarity=0.116 Sum_probs=143.7
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++++||||||+||++++++|++.| .+|+++.|.... ..+.+. +.++.. ..++.+
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g---~~v~~~~~~~~~--~~~~~~---------~~l~~~---------~~~~~~ 60 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEG---AKVVINYNSSKE--AAENLV---------NELGKE---------GHDVYA 60 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC---CEEEEEcCCcHH--HHHHHH---------HHHHhc---------CCeEEE
Confidence 468999999999999999999999988 456655443221 111111 111111 246888
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|++++ +....+++ .+|+|||+|+.... .+.++..+++|+.|+.++++.+... .
T Consensus 61 ~~~D~~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 133 (247)
T PRK12935 61 VQADVSKV-------EDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEA 133 (247)
T ss_pred EECCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 99999953 33333333 48999999997542 1456677899999999999988753 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||.+..... .....|+
T Consensus 134 ~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~ 157 (247)
T PRK12935 134 EEGRIISISSIIGQAGG--------------------------------------------------------FGQTNYS 157 (247)
T ss_pred CCcEEEEEcchhhcCCC--------------------------------------------------------CCCcchH
Confidence 34689999996543211 1124699
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..|.+++.. ..++++++++|+.|.++..... +.........+. ...++.+++|
T Consensus 158 ~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~---------~~~~~~~~~~~~---------~~~~~~~~ed 219 (247)
T PRK12935 158 AAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEV---------PEEVRQKIVAKI---------PKKRFGQADE 219 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhc---------cHHHHHHHHHhC---------CCCCCcCHHH
Confidence 9999888877654 3489999999999876532111 111111111111 1235789999
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++++.++... .-..+++||+.++
T Consensus 220 va~~~~~~~~~~--~~~~g~~~~i~~g 244 (247)
T PRK12935 220 IAKGVVYLCRDG--AYITGQQLNINGG 244 (247)
T ss_pred HHHHHHHHcCcc--cCccCCEEEeCCC
Confidence 999999887522 1123689999886
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=7.6e-16 Score=153.87 Aligned_cols=226 Identities=18% Similarity=0.177 Sum_probs=143.8
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.|+|+||||||+||++++++|++.| .+|+++.|..... .+... +.++.. ..++.++.
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g---~~vi~~~r~~~~~--~~~~~---------~~~~~~---------~~~~~~~~ 58 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAG---FDLAINDRPDDEE--LAATQ---------QELRAL---------GVEVIFFP 58 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCC---CEEEEEecCchhH--HHHHH---------HHHHhc---------CCceEEEE
Confidence 4789999999999999999999988 5678888764321 11111 111110 24688999
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc---------cccHHHHHHHhHHHHHHHHHHHHHc----cC-----
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---------DERYDVAFGINTLGVIHLVNFAKKC----VK----- 153 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f---------~~~~~~~~~~Nv~gt~~ll~la~~~----~~----- 153 (570)
+|+++++--....+........+|+|||+||.... .+.++..+++|+.|+.++++.+.+. ++
T Consensus 59 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ 138 (256)
T PRK12745 59 ADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELP 138 (256)
T ss_pred ecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCC
Confidence 99995421000000111112468999999987431 1446677999999999998887542 11
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||....... .....|+.
T Consensus 139 ~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~ 162 (256)
T PRK12745 139 HRSIVFVSSVNAIMVS--------------------------------------------------------PNRGEYCI 162 (256)
T ss_pred CcEEEEECChhhccCC--------------------------------------------------------CCCcccHH
Confidence 5679999997553321 12356999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHH
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
+|+..|.+++.+ ..+++++++||+.+.++...+ +.+.. ......+.. ...++.+++|+
T Consensus 163 sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~---~~~~~------~~~~~~~~~--------~~~~~~~~~d~ 225 (256)
T PRK12745 163 SKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAP---VTAKY------DALIAKGLV--------PMPRWGEPEDV 225 (256)
T ss_pred HHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccc---cchhH------HhhhhhcCC--------CcCCCcCHHHH
Confidence 999999988766 357999999999998865422 11111 111111111 12346689999
Q ss_pred HHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++..++... .....+.+|++.++
T Consensus 226 a~~i~~l~~~~-~~~~~G~~~~i~gg 250 (256)
T PRK12745 226 ARAVAALASGD-LPYSTGQAIHVDGG 250 (256)
T ss_pred HHHHHHHhCCc-ccccCCCEEEECCC
Confidence 99988876422 12223789999876
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=7.8e-16 Score=154.43 Aligned_cols=228 Identities=13% Similarity=0.110 Sum_probs=146.3
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
...++++++|||||+|+||.+++++|++.| .+|+++.|++... +.+.+ +.+ ..+
T Consensus 6 ~~~~~~~~vlItGa~g~iG~~~a~~L~~~g---~~V~~~~r~~~~~---~~~~~-------------~~~-------~~~ 59 (264)
T PRK12829 6 LKPLDGLRVLVTGGASGIGRAIAEAFAEAG---ARVHVCDVSEAAL---AATAA-------------RLP-------GAK 59 (264)
T ss_pred hhccCCCEEEEeCCCCcHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHH-------------HHh-------cCc
Confidence 344789999999999999999999999988 5788899865321 11111 111 125
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f--------~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
+..+.+|++++ +....++ .++|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 60 ~~~~~~D~~~~-------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 132 (264)
T PRK12829 60 VTATVADVADP-------AQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPL 132 (264)
T ss_pred eEEEEccCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 78899999953 3333332 468999999997621 2345677899999999998887431
Q ss_pred ---cCc-eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCC
Q 008324 152 ---VKL-KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (570)
Q Consensus 152 ---~~l-~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 227 (570)
.+. +.++++||....... +.
T Consensus 133 ~~~~~~~~~vv~~ss~~~~~~~--------------------------------------------------------~~ 156 (264)
T PRK12829 133 LKASGHGGVIIALSSVAGRLGY--------------------------------------------------------PG 156 (264)
T ss_pred HHhCCCCeEEEEecccccccCC--------------------------------------------------------CC
Confidence 233 568888775422110 11
Q ss_pred CchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCcc---ccCccchHHHHHHHhcCCceeeecCCCee
Q 008324 228 PNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGW---VEDLKTINTLFVASAQGNLRCLVGETKVI 299 (570)
Q Consensus 228 ~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw---~~~~~~~~~~i~~~~~G~~~~~~~~~~~~ 299 (570)
...|+.+|+..|.++... ..+++++++||+.++++..+..... ..+ .+.........+ .. ..
T Consensus 157 ~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~-----~~ 226 (264)
T PRK12829 157 RTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLG-IGLDEMEQEYLE----KI-----SL 226 (264)
T ss_pred CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccC-CChhHHHHHHHh----cC-----CC
Confidence 245999999999988765 2479999999999998754321100 000 000010001110 11 12
Q ss_pred eeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 300 MDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 300 ~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
..+++++|+++++..++... .....+++|+++++
T Consensus 227 ~~~~~~~d~a~~~~~l~~~~-~~~~~g~~~~i~~g 260 (264)
T PRK12829 227 GRMVEPEDIAATALFLASPA-ARYITGQAISVDGN 260 (264)
T ss_pred CCCCCHHHHHHHHHHHcCcc-ccCccCcEEEeCCC
Confidence 35899999999988876422 12224779999887
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.68 E-value=9.7e-16 Score=148.55 Aligned_cols=259 Identities=16% Similarity=0.174 Sum_probs=183.9
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+.||||-||+-|..|++.||+.| ..|+.++|....-... |+ .|.+.+. ....++..+.
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekG---Y~VhGi~Rrss~~n~~-ri--~L~~~~~--------------~~~~~l~l~~ 61 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKG---YEVHGIKRRSSSFNTP-RI--HLYEDPH--------------LNDPRLHLHY 61 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcC---cEEEEEeeccccCCcc-cc--eeccccc--------------cCCceeEEEe
Confidence 6899999999999999999999999 6778888865332211 11 0111111 1134688999
Q ss_pred ccCCCCCCCCCchhhHHHHhC--CccEEEEcCccC----CccccHHHHHHHhHHHHHHHHHHHHHccC-ceEEEEEecce
Q 008324 92 GDISSEDLGLKDSNLKEELWN--ELDIMVNSAAIT----KFDERYDVAFGINTLGVIHLVNFAKKCVK-LKVFVHVSTAY 164 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v----~f~~~~~~~~~~Nv~gt~~ll~la~~~~~-l~~~V~vSTa~ 164 (570)
||++ |...+..+++ ++|-|+|+||.. +|+++. ...+++..||.+||++.+.... -.+|...||+-
T Consensus 62 gDLt-------D~~~l~r~l~~v~PdEIYNLaAQS~V~vSFe~P~-~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE 133 (345)
T COG1089 62 GDLT-------DSSNLLRILEEVQPDEIYNLAAQSHVGVSFEQPE-YTADVDAIGTLRLLEAIRILGEKKTRFYQASTSE 133 (345)
T ss_pred cccc-------chHHHHHHHHhcCchhheeccccccccccccCcc-eeeeechhHHHHHHHHHHHhCCcccEEEecccHH
Confidence 9999 4444445555 489999999964 566554 4478999999999999998732 36899999999
Q ss_pred eecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHH
Q 008324 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (570)
Q Consensus 165 v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~ 244 (570)
.+|.. .|.+..|.+|+ .+.++|+.+|.-|.-+...
T Consensus 134 ~fG~v----~~~pq~E~TPF-----------------------------------------yPrSPYAvAKlYa~W~tvN 168 (345)
T COG1089 134 LYGLV----QEIPQKETTPF-----------------------------------------YPRSPYAVAKLYAYWITVN 168 (345)
T ss_pred hhcCc----ccCccccCCCC-----------------------------------------CCCCHHHHHHHHHHheeee
Confidence 99853 34554444443 3468999999999998876
Q ss_pred h--ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceee-ecCCCeeeeeeehHHHHHHHHHHHHHhhC
Q 008324 245 S--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL-VGETKVIMDVIPVDMVVNAMIVAMVAHAK 321 (570)
Q Consensus 245 ~--~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~-~~~~~~~~d~VpVDdva~aii~a~~~~~~ 321 (570)
| ..++-.|. ||.+-. +.|.-|-.--..-++..+..+..|....+ .||-+..+||=+..|.+++|...+...
T Consensus 169 YResYgl~Acn---GILFNH-ESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQq~-- 242 (345)
T COG1089 169 YRESYGLFACN---GILFNH-ESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQQE-- 242 (345)
T ss_pred hHhhcCceeec---ceeecC-CCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHHHccC--
Confidence 6 34554443 333432 23444422222445556667777876554 589999999999999999998887522
Q ss_pred CCCCCceEEecCCCCCcccHHHHHHHHhhhccc
Q 008324 322 QPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 322 ~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~ 354 (570)
.++-|.++++ ...|..+++++..+..|.
T Consensus 243 ---~PddyViATg--~t~sVrefv~~Af~~~g~ 270 (345)
T COG1089 243 ---EPDDYVIATG--ETHSVREFVELAFEMVGI 270 (345)
T ss_pred ---CCCceEEecC--ceeeHHHHHHHHHHHcCc
Confidence 1567999999 789999999999988773
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.1e-15 Score=149.00 Aligned_cols=224 Identities=15% Similarity=0.173 Sum_probs=145.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||.+|+++|++.| .+|+++.|+.... +...++ ++ ...++..
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G---~~v~~~~r~~~~~---~~~~~~---------~~----------~~~~~~~ 57 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREG---ARVVVADRDAEAA---ERVAAA---------IA----------AGGRAFA 57 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCC---CeEEEecCCHHHH---HHHHHH---------Hh----------cCCeEEE
Confidence 468999999999999999999999988 6788888875321 111111 11 0246889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~ 152 (570)
+.+|+++ .+..+.++ .++|+|||+|+.... .+.++..+++|+.|+.++.+.+.. + .
T Consensus 58 ~~~D~~~-------~~~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 130 (252)
T PRK06138 58 RQGDVGS-------AEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ 130 (252)
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc
Confidence 9999995 33333333 368999999997532 133556689999999887776542 1 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+.+++|++||....... ...+.|+
T Consensus 131 ~~~~ii~~sS~~~~~~~--------------------------------------------------------~~~~~Y~ 154 (252)
T PRK06138 131 GGGSIVNTASQLALAGG--------------------------------------------------------RGRAAYV 154 (252)
T ss_pred CCeEEEEECChhhccCC--------------------------------------------------------CCccHHH
Confidence 56789999997543211 1235799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.+|+..+.+++.+ ..+++++++||+.+.++.......+... ... +.....+. .....+++++|
T Consensus 155 ~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~---~~~-~~~~~~~~--------~~~~~~~~~~d 222 (252)
T PRK06138 155 ASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHAD---PEA-LREALRAR--------HPMNRFGTAEE 222 (252)
T ss_pred HHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccC---hHH-HHHHHHhc--------CCCCCCcCHHH
Confidence 9999999988765 2479999999999988765332222111 111 11111110 11123678999
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++++.++.... ....+.++.+.++
T Consensus 223 ~a~~~~~l~~~~~-~~~~g~~~~~~~g 248 (252)
T PRK06138 223 VAQAALFLASDES-SFATGTTLVVDGG 248 (252)
T ss_pred HHHHHHHHcCchh-cCccCCEEEECCC
Confidence 9999998875332 1223567777654
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.8e-15 Score=149.90 Aligned_cols=221 Identities=15% Similarity=0.110 Sum_probs=146.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.| .+|+++.|+.... +.+. +.++.. ..++..
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~---------~~i~~~---------~~~~~~ 63 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQAG---AEVILNGRDPAKL---AAAA---------ESLKGQ---------GLSAHA 63 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHcC---CEEEEEeCCHHHH---HHHH---------HHHHhc---------CceEEE
Confidence 579999999999999999999999988 5788888864221 1111 111111 135788
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++++.+.+. .
T Consensus 64 ~~~D~~~-------~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 136 (255)
T PRK07523 64 LAFDVTD-------HDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIAR 136 (255)
T ss_pred EEccCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Confidence 9999995 33333443 348999999997532 2335677889999999999988753 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... +....|+
T Consensus 137 ~~g~iv~iss~~~~~~~--------------------------------------------------------~~~~~y~ 160 (255)
T PRK07523 137 GAGKIINIASVQSALAR--------------------------------------------------------PGIAPYT 160 (255)
T ss_pred CCeEEEEEccchhccCC--------------------------------------------------------CCCccHH
Confidence 45789999986432110 1135699
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.+|+..|.+++.+ ..++++.++||+.+.++..... ... ......+.... ....+..++|
T Consensus 161 ~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~---~~~----~~~~~~~~~~~---------~~~~~~~~~d 224 (255)
T PRK07523 161 ATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAAL---VAD----PEFSAWLEKRT---------PAGRWGKVEE 224 (255)
T ss_pred HHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhh---ccC----HHHHHHHHhcC---------CCCCCcCHHH
Confidence 9999999988765 3589999999999988754211 000 11111111111 1123567899
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++.++..... .-.++++++.++
T Consensus 225 va~~~~~l~~~~~~-~~~G~~i~~~gg 250 (255)
T PRK07523 225 LVGACVFLASDASS-FVNGHVLYVDGG 250 (255)
T ss_pred HHHHHHHHcCchhc-CccCcEEEECCC
Confidence 99999888753222 123678888877
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.3e-15 Score=152.69 Aligned_cols=164 Identities=13% Similarity=0.134 Sum_probs=119.2
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+++|+||||||+||++++++|++.| .+|+++.|+.... +.+. +. ...++..+
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G---~~V~~~~r~~~~~---~~l~-------------~~--------~~~~~~~~ 55 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAG---HRVVGTVRSEAAR---ADFE-------------AL--------HPDRALAR 55 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCc---CEEEEEeCCHHHH---HHHH-------------hh--------cCCCeeEE
Confidence 46899999999999999999999998 6789999865321 1111 11 12467889
Q ss_pred eccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHHH-c--cC
Q 008324 91 PGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAKK-C--VK 153 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f~-------~~~~~~~~~Nv~gt~~ll~la~~-~--~~ 153 (570)
.+|++++ +....+++ .+|+|||+||..... +.++..+++|+.|+.++++.+.. + .+
T Consensus 56 ~~D~~d~-------~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~ 128 (277)
T PRK06180 56 LLDVTDF-------DAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR 128 (277)
T ss_pred EccCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC
Confidence 9999953 33333333 589999999985431 23566689999999999998643 1 24
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||....... +....|+.
T Consensus 129 ~~~iv~iSS~~~~~~~--------------------------------------------------------~~~~~Y~~ 152 (277)
T PRK06180 129 RGHIVNITSMGGLITM--------------------------------------------------------PGIGYYCG 152 (277)
T ss_pred CCEEEEEecccccCCC--------------------------------------------------------CCcchhHH
Confidence 5689999997543211 12357999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCC
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYK 264 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ 264 (570)
||+..|.+++.. ..+++++++||+.|.+++.
T Consensus 153 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~ 188 (277)
T PRK06180 153 SKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWA 188 (277)
T ss_pred HHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCcc
Confidence 999999888765 2489999999999987654
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.3e-15 Score=148.96 Aligned_cols=226 Identities=13% Similarity=0.118 Sum_probs=141.1
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.+++|+++||||+|+||++++++|++.| .+|+++.|+... +.+.++ +.. ...++.
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G---~~v~~~~r~~~~----~~~~~~---------~~~---------~~~~~~ 59 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEG---ARVVLVDRSELV----HEVAAE---------LRA---------AGGEAL 59 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCchHH----HHHHHH---------HHh---------cCCeEE
Confidence 4789999999999999999999999998 567888886321 111111 111 024677
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHH-c-
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKK-C- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~----f----~~~~~~~~~~Nv~gt~~ll~la~~-~- 151 (570)
++.+|++++ +....++ ..+|++||+||... + .+.++..+++|+.|+..+++.+.. +
T Consensus 60 ~~~~D~~~~-------~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 132 (260)
T PRK12823 60 ALTADLETY-------AGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHML 132 (260)
T ss_pred EEEEeCCCH-------HHHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 899999953 2222222 36899999998531 1 234566788999998877655543 2
Q ss_pred -cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+..++|++||...++. ....
T Consensus 133 ~~~~g~iv~~sS~~~~~~----------------------------------------------------------~~~~ 154 (260)
T PRK12823 133 AQGGGAIVNVSSIATRGI----------------------------------------------------------NRVP 154 (260)
T ss_pred hcCCCeEEEEcCccccCC----------------------------------------------------------CCCc
Confidence 24568999999754321 1235
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCc---cccC-ccchHHHHHHHhcCCceeeecCCCeeee
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPG---WVED-LKTINTLFVASAQGNLRCLVGETKVIMD 301 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~g---w~~~-~~~~~~~i~~~~~G~~~~~~~~~~~~~d 301 (570)
|+.||+..|.+++.+ ..++++++++|+.|+++...-... +.+. ......+......+.. ..-
T Consensus 155 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 225 (260)
T PRK12823 155 YSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSL---------MKR 225 (260)
T ss_pred cHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCC---------ccc
Confidence 999999999988765 347999999999999864210000 0000 0111112222222211 111
Q ss_pred eeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 302 ~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+..++|+|++++.++.... ..-.+++|++.++
T Consensus 226 ~~~~~dva~~~~~l~s~~~-~~~~g~~~~v~gg 257 (260)
T PRK12823 226 YGTIDEQVAAILFLASDEA-SYITGTVLPVGGG 257 (260)
T ss_pred CCCHHHHHHHHHHHcCccc-ccccCcEEeecCC
Confidence 3367999999988774321 1123678888766
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.1e-15 Score=147.13 Aligned_cols=218 Identities=17% Similarity=0.187 Sum_probs=144.1
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+++|+||||||++|+++++.|++.| .+|+++.|+.... +.+.++ ++. ...++.++
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g---~~v~~~~r~~~~~---~~~~~~---------~~~---------~~~~~~~~ 59 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADG---AKVVIYDSNEEAA---EALAAE---------LRA---------AGGEARVL 59 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCChhHH---HHHHHH---------HHh---------cCCceEEE
Confidence 46899999999999999999999988 5688888875322 111111 111 12568889
Q ss_pred eccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHHHc---cC
Q 008324 91 PGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAKKC---VK 153 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f~-------~~~~~~~~~Nv~gt~~ll~la~~~---~~ 153 (570)
.+|++++ +....++ ..+|+|||+||..... +.++..+++|+.++.++++.+... .+
T Consensus 60 ~~D~~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~ 132 (246)
T PRK05653 60 VFDVSDE-------AAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR 132 (246)
T ss_pred EccCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 9999954 2222322 3579999999876431 235667899999999999888531 25
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
.+++|++||....... .....|+.
T Consensus 133 ~~~ii~~ss~~~~~~~--------------------------------------------------------~~~~~y~~ 156 (246)
T PRK05653 133 YGRIVNISSVSGVTGN--------------------------------------------------------PGQTNYSA 156 (246)
T ss_pred CcEEEEECcHHhccCC--------------------------------------------------------CCCcHhHh
Confidence 6799999986432110 12356999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHH
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
+|+..|.+++.. ..+++++++||+.+.++...++ ........... . ....++.++|+
T Consensus 157 sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~---------~~~~~~~~~~~----~-----~~~~~~~~~dv 218 (246)
T PRK05653 157 AKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGL---------PEEVKAEILKE----I-----PLGRLGQPEEV 218 (246)
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhh---------hHHHHHHHHhc----C-----CCCCCcCHHHH
Confidence 999888877654 3479999999999988654210 00111111111 1 11446788999
Q ss_pred HHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++..++..... ...+++|++++|
T Consensus 219 a~~~~~~~~~~~~-~~~g~~~~~~gg 243 (246)
T PRK05653 219 ANAVAFLASDAAS-YITGQVIPVNGG 243 (246)
T ss_pred HHHHHHHcCchhc-CccCCEEEeCCC
Confidence 9999988753222 223689998886
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=7.8e-15 Score=150.63 Aligned_cols=223 Identities=13% Similarity=0.129 Sum_probs=146.7
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+||||||+|+||++++++|++.| .+|++..|+...... +.+.+ .++.. ..++.+
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~G---~~V~i~~~~~~~~~~-~~~~~---------~~~~~---------~~~~~~ 110 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFAREG---ADIALNYLPEEEQDA-AEVVQ---------LIQAE---------GRKAVA 110 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHcC---CEEEEEeCCcchHHH-HHHHH---------HHHHc---------CCeEEE
Confidence 568999999999999999999999998 456666555432211 11111 11110 246778
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHHc-cC
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKKC-VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~----f----~~~~~~~~~~Nv~gt~~ll~la~~~-~~ 153 (570)
+.+|++++ +..+.++ .++|+|||+||... + .+.++..+++|+.|+.++++.+... ..
T Consensus 111 ~~~Dl~~~-------~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 183 (300)
T PRK06128 111 LPGDLKDE-------AFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP 183 (300)
T ss_pred EecCCCCH-------HHHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc
Confidence 99999953 3232332 36899999999642 1 2456778999999999999998753 23
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
-.++|++||...+.... ....|+.
T Consensus 184 ~~~iv~~sS~~~~~~~~--------------------------------------------------------~~~~Y~a 207 (300)
T PRK06128 184 GASIINTGSIQSYQPSP--------------------------------------------------------TLLDYAS 207 (300)
T ss_pred CCEEEEECCccccCCCC--------------------------------------------------------CchhHHH
Confidence 35899999976654211 1245999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHH
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..+.+++.+ ..++++.+++|+.|.++..... .. ....+..+..+. ....+...+|+
T Consensus 208 sK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~--~~-----~~~~~~~~~~~~---------p~~r~~~p~dv 271 (300)
T PRK06128 208 TKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSG--GQ-----PPEKIPDFGSET---------PMKRPGQPVEM 271 (300)
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccC--CC-----CHHHHHHHhcCC---------CCCCCcCHHHH
Confidence 999999998765 3589999999999998754210 00 011121222111 11235578999
Q ss_pred HHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++++.++.... .--.+++|++.++
T Consensus 272 a~~~~~l~s~~~-~~~~G~~~~v~gg 296 (300)
T PRK06128 272 APLYVLLASQES-SYVTGEVFGVTGG 296 (300)
T ss_pred HHHHHHHhCccc-cCccCcEEeeCCC
Confidence 999988775322 2223689999887
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.9e-15 Score=150.37 Aligned_cols=221 Identities=17% Similarity=0.169 Sum_probs=143.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEE-EEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYL-FVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~-lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+.|++++||||||+||++++++|++.| .+|++ +.|+... .+.+.++ ++.. ..++.
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g---~~v~~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~ 57 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEG---YDIAVNYARSRKA---AEETAEE---------IEAL---------GRKAL 57 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCCHHH---HHHHHHH---------HHhc---------CCeEE
Confidence 467999999999999999999999998 45444 4565322 1111111 1111 24678
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHHHc---
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAKKC--- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f~-------~~~~~~~~~Nv~gt~~ll~la~~~--- 151 (570)
++.+|++++ +....++ ..+|+|||+|+..... +.++..+++|+.|+.++++.+...
T Consensus 58 ~~~~D~~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 130 (250)
T PRK08063 58 AVKANVGDV-------EKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEK 130 (250)
T ss_pred EEEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 899999953 3333333 3589999999864321 234556889999999999888752
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+.++||++||....... +....|
T Consensus 131 ~~~g~iv~~sS~~~~~~~--------------------------------------------------------~~~~~y 154 (250)
T PRK08063 131 VGGGKIISLSSLGSIRYL--------------------------------------------------------ENYTTV 154 (250)
T ss_pred cCCeEEEEEcchhhccCC--------------------------------------------------------CCccHH
Confidence 245699999996433211 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..|.+++.+ ..++++++++|+.|.++.....+++ ..+...... .. ....+++.+
T Consensus 155 ~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~-------~~~~~~~~~-~~--------~~~~~~~~~ 218 (250)
T PRK08063 155 GVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNR-------EELLEDARA-KT--------PAGRMVEPE 218 (250)
T ss_pred HHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCc-------hHHHHHHhc-CC--------CCCCCcCHH
Confidence 99999999998765 3579999999999977643322221 111111111 10 012368899
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++.... ....++++++.++
T Consensus 219 dva~~~~~~~~~~~-~~~~g~~~~~~gg 245 (250)
T PRK08063 219 DVANAVLFLCSPEA-DMIRGQTIIVDGG 245 (250)
T ss_pred HHHHHHHHHcCchh-cCccCCEEEECCC
Confidence 99999998875322 2223678888776
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.2e-15 Score=148.17 Aligned_cols=225 Identities=15% Similarity=0.243 Sum_probs=147.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++|++++||||||+||++++++|++.| .+|.++.|+.... .+.++ +++. ..++.+
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~G---~~v~~~~r~~~~~----~~~~~---------~~~~---------~~~~~~ 59 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEEG---AIPVIFGRSAPDD----EFAEE---------LRAL---------QPRAEF 59 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHcC---CcEEEEcCChhhH----HHHHH---------HHhc---------CCceEE
Confidence 679999999999999999999999998 5677888876432 11111 1111 246889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCC---cc---ccHHHHHHHhHHHHHHHHHHHHHc--cCc
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK---FD---ERYDVAFGINTLGVIHLVNFAKKC--VKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~---f~---~~~~~~~~~Nv~gt~~ll~la~~~--~~l 154 (570)
+.+|++++ +..+.++ ..+|+|||+||... ++ +.++..+++|+.|+.++.+.+.+. .+.
T Consensus 60 ~~~D~~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 132 (258)
T PRK08628 60 VQVDLTDD-------AQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASR 132 (258)
T ss_pred EEccCCCH-------HHHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccC
Confidence 99999953 3233333 36899999999532 22 446677899999999998887642 134
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.+||++||....... +....|+.|
T Consensus 133 ~~iv~~ss~~~~~~~--------------------------------------------------------~~~~~Y~~s 156 (258)
T PRK08628 133 GAIVNISSKTALTGQ--------------------------------------------------------GGTSGYAAA 156 (258)
T ss_pred cEEEEECCHHhccCC--------------------------------------------------------CCCchhHHH
Confidence 679999986543211 123579999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHH
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..|.+++.. ..++++..++|+.|+++..+ .|...+............. .+. + ..+++.+|+|
T Consensus 157 K~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~---~~~~~~~~~~~~~~~~~~~----~~~-~---~~~~~~~dva 225 (258)
T PRK08628 157 KGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYE---NWIATFDDPEAKLAAITAK----IPL-G---HRMTTAEEIA 225 (258)
T ss_pred HHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHH---HHhhhccCHHHHHHHHHhc----CCc-c---ccCCCHHHHH
Confidence 99999998865 34799999999999986532 1322222111111111111 110 0 1357889999
Q ss_pred HHHHHHHHHhhCCCCCCceEEecCC
Q 008324 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++.++...... ..++.|.+.++
T Consensus 226 ~~~~~l~~~~~~~-~~g~~~~~~gg 249 (258)
T PRK08628 226 DTAVFLLSERSSH-TTGQWLFVDGG 249 (258)
T ss_pred HHHHHHhChhhcc-ccCceEEecCC
Confidence 9999988643222 23667777654
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.2e-15 Score=149.57 Aligned_cols=222 Identities=13% Similarity=0.096 Sum_probs=141.6
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.++||+|+||||+|+||++++++|++.| .+|+++.|+.... +.+.. + ...++.
T Consensus 7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g---~~v~~~~~~~~~~---~~~~~-------------~--------~~~~~~ 59 (255)
T PRK05717 7 GHNGRVALVTGAARGIGLGIAAWLIAEG---WQVVLADLDRERG---SKVAK-------------A--------LGENAW 59 (255)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHcC---CEEEEEcCCHHHH---HHHHH-------------H--------cCCceE
Confidence 5789999999999999999999999998 5777777754321 11110 0 124678
Q ss_pred EEeccCCCCCCCCCchhhHHHHh---CCccEEEEcCccCCc---------cccHHHHHHHhHHHHHHHHHHHHHc--cCc
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW---NELDIMVNSAAITKF---------DERYDVAFGINTLGVIHLVNFAKKC--VKL 154 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~---~~vdiViH~AA~v~f---------~~~~~~~~~~Nv~gt~~ll~la~~~--~~l 154 (570)
++.+|+++++-- ....+.+. ..+|+|||+||.... .+.++..+++|+.|+.++++++... ++.
T Consensus 60 ~~~~Dl~~~~~~---~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 136 (255)
T PRK05717 60 FIAMDVADEAQV---AAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHN 136 (255)
T ss_pred EEEccCCCHHHH---HHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC
Confidence 899999953200 00111222 358999999997532 1335677899999999999999642 233
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||....... +..+.|+.|
T Consensus 137 g~ii~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~s 160 (255)
T PRK05717 137 GAIVNLASTRARQSE--------------------------------------------------------PDTEAYAAS 160 (255)
T ss_pred cEEEEEcchhhcCCC--------------------------------------------------------CCCcchHHH
Confidence 578999886543211 113569999
Q ss_pred HHHHHHHHHHh----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHH
Q 008324 235 KTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (570)
Q Consensus 235 K~~aE~lv~~~----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ 310 (570)
|+..|.+++.+ ..++++.+++|+.|.++.... .. .... .....+.. ....+..+++++.
T Consensus 161 Kaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~--~~------~~~~-~~~~~~~~--------~~~~~~~~~~va~ 223 (255)
T PRK05717 161 KGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQ--RR------AEPL-SEADHAQH--------PAGRVGTVEDVAA 223 (255)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEEecccCcCCcccc--cc------chHH-HHHHhhcC--------CCCCCcCHHHHHH
Confidence 99999888765 346899999999998864211 00 0011 11111110 0123567899999
Q ss_pred HHHHHHHHhhCCCCCCceEEecCC
Q 008324 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++..++..... .-.++++.+.++
T Consensus 224 ~~~~l~~~~~~-~~~g~~~~~~gg 246 (255)
T PRK05717 224 MVAWLLSRQAG-FVTGQEFVVDGG 246 (255)
T ss_pred HHHHHcCchhc-CccCcEEEECCC
Confidence 98877643221 123667777665
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=8.8e-15 Score=148.19 Aligned_cols=222 Identities=13% Similarity=0.149 Sum_probs=142.7
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
..+|+++||||+|+||++++++|++.| .+|+++.|+... .+.+. +.++.. ..++..
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G---~~V~~~~r~~~~---~~~~~---------~~~~~~---------~~~~~~ 63 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAG---FPVALGARRVEK---CEELV---------DKIRAD---------GGEAVA 63 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH---------HHHHhc---------CCeEEE
Confidence 346799999999999999999999988 577888885421 11111 111110 246778
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc----c---ccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF----D---ERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f----~---~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|++++ +....++ ..+|+|||+||.... + +.++..+++|+.|+.++++.+... .
T Consensus 64 ~~~Dl~~~-------~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~ 136 (274)
T PRK07775 64 FPLDVTDP-------DSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIER 136 (274)
T ss_pred EECCCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 89999953 3333333 368999999997532 1 334566899999999998887531 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..+||++||...+... +....|+
T Consensus 137 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 160 (274)
T PRK07775 137 RRGDLIFVGSDVALRQR--------------------------------------------------------PHMGAYG 160 (274)
T ss_pred CCceEEEECChHhcCCC--------------------------------------------------------CCcchHH
Confidence 45679999997554321 1124699
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.+|+..|.+++.+ ..+++++++||+.+.++..... .. .....++..... .+ ......++++||
T Consensus 161 ~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~---~~--~~~~~~~~~~~~------~~-~~~~~~~~~~~d 228 (274)
T PRK07775 161 AAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSL---PA--EVIGPMLEDWAK------WG-QARHDYFLRASD 228 (274)
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccC---Ch--hhhhHHHHHHHH------hc-ccccccccCHHH
Confidence 9999999998866 2389999999988765432110 00 111111111110 00 112345899999
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++.++... ..+.+||+.-.
T Consensus 229 va~a~~~~~~~~----~~~~~~~~~~~ 251 (274)
T PRK07775 229 LARAITFVAETP----RGAHVVNMEVQ 251 (274)
T ss_pred HHHHHHHHhcCC----CCCCeeEEeec
Confidence 999999888521 12568887643
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.6e-15 Score=147.79 Aligned_cols=222 Identities=15% Similarity=0.155 Sum_probs=143.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++|+||||+||||++++++|++.| .+|++..|+.... +. +. ...+++. ..++..
T Consensus 4 ~~~~~vlitGasg~iG~~l~~~l~~~g---~~v~~~~~~~~~~-----~~-~~-----~~~~~~~---------~~~~~~ 60 (252)
T PRK06077 4 LKDKVVVVTGSGRGIGRAIAVRLAKEG---SLVVVNAKKRAEE-----MN-ET-----LKMVKEN---------GGEGIG 60 (252)
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCChHH-----HH-HH-----HHHHHHc---------CCeeEE
Confidence 358999999999999999999999988 4566666654211 11 00 0111110 135678
Q ss_pred EeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc-cCc
Q 008324 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~l 154 (570)
+.+|+++++ ....+ ...+|+|||+||.... .+.++..+++|+.|+.++++.+.+. +.-
T Consensus 61 ~~~D~~~~~-------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 133 (252)
T PRK06077 61 VLADVSTRE-------GCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG 133 (252)
T ss_pred EEeccCCHH-------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC
Confidence 899999542 22222 2468999999996322 1224567899999999999988753 233
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.+||++||...+... +..+.|+.|
T Consensus 134 ~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~s 157 (252)
T PRK06077 134 GAIVNIASVAGIRPA--------------------------------------------------------YGLSIYGAM 157 (252)
T ss_pred cEEEEEcchhccCCC--------------------------------------------------------CCchHHHHH
Confidence 579999997654321 123579999
Q ss_pred HHHHHHHHHHh----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHH
Q 008324 235 KTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (570)
Q Consensus 235 K~~aE~lv~~~----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ 310 (570)
|+..|.+++.+ ..++.+.+++|+.|.++.......+.. .... ... +. . .....+++++|+|+
T Consensus 158 K~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~---~~~~---~~~-~~---~----~~~~~~~~~~dva~ 223 (252)
T PRK06077 158 KAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLG---MSEK---EFA-EK---F----TLMGKILDPEEVAE 223 (252)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhccc---ccHH---HHH-Hh---c----CcCCCCCCHHHHHH
Confidence 99999988765 347899999999997764321111100 0000 000 00 0 11235799999999
Q ss_pred HHHHHHHHhhCCCCCCceEEecCC
Q 008324 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++.++... ...+++|++.++
T Consensus 224 ~~~~~~~~~---~~~g~~~~i~~g 244 (252)
T PRK06077 224 FVAAILKIE---SITGQVFVLDSG 244 (252)
T ss_pred HHHHHhCcc---ccCCCeEEecCC
Confidence 999988522 223679999887
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.4e-14 Score=143.69 Aligned_cols=220 Identities=12% Similarity=0.106 Sum_probs=143.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC-cccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD-IDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~-~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+++|+|+||||||+||+++++.|++.| .+|+++.|... .....+.+.++ +.. ...++.
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g---~~v~~~~~~~~~~~~~~~~~~~~---------~~~---------~~~~~~ 62 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADG---ADVIVLDIHPMRGRAEADAVAAG---------IEA---------AGGKAL 62 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCC---CeEEEEcCcccccHHHHHHHHHH---------HHh---------cCCcEE
Confidence 468999999999999999999999998 56677766432 22222211111 111 024688
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHH-Hc--
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAK-KC-- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~-~~-- 151 (570)
++.+|++++ +..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++++++. .+
T Consensus 63 ~~~~Dl~~~-------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 135 (249)
T PRK12827 63 GLAFDVRDF-------AATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIR 135 (249)
T ss_pred EEEccCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHh
Confidence 999999953 3233332 468999999997641 13356678999999999999998 21
Q ss_pred -cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+..++|++||....... .....
T Consensus 136 ~~~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~ 159 (249)
T PRK12827 136 ARRGGRIVNIASVAGVRGN--------------------------------------------------------RGQVN 159 (249)
T ss_pred cCCCeEEEEECCchhcCCC--------------------------------------------------------CCCch
Confidence 256789999997554321 11246
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.+|+..+.+++.. ..+++++++||+.|.++...... +...+. .. . ....+.++
T Consensus 160 y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~--------~~~~~~---~~----~-----~~~~~~~~ 219 (249)
T PRK12827 160 YAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAA--------PTEHLL---NP----V-----PVQRLGEP 219 (249)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccc--------hHHHHH---hh----C-----CCcCCcCH
Confidence 999999888887654 24899999999999987542210 001110 00 0 11124588
Q ss_pred HHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++++.++... .....++++++.++
T Consensus 220 ~~va~~~~~l~~~~-~~~~~g~~~~~~~g 247 (249)
T PRK12827 220 DEVAALVAFLVSDA-ASYVTGQVIPVDGG 247 (249)
T ss_pred HHHHHHHHHHcCcc-cCCccCcEEEeCCC
Confidence 99999988777422 22223678888765
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=6.3e-15 Score=147.47 Aligned_cols=231 Identities=13% Similarity=0.109 Sum_probs=153.1
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+++||||||+||+.+++.|++.| .+|+++.|+.... +.+.+++ ...++.++.
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g---~~v~~~~r~~~~~---~~~~~~~--------------------~~~~~~~~~ 55 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAG---DRVLALDIDAAAL---AAFADAL--------------------GDARFVPVA 55 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHh--------------------cCCceEEEE
Confidence 6799999999999999999999988 5788888864321 1111110 024678899
Q ss_pred ccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc---c----ccHHHHHHHhHHHHHHHHHHHHH-c--cCc
Q 008324 92 GDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF---D----ERYDVAFGINTLGVIHLVNFAKK-C--VKL 154 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f---~----~~~~~~~~~Nv~gt~~ll~la~~-~--~~l 154 (570)
+|++++ +....+++ ++|+|||+||.... . +.+...+.+|+.|+.++++.+.. + .+.
T Consensus 56 ~D~~~~-------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 128 (257)
T PRK07074 56 CDLTDA-------ASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSR 128 (257)
T ss_pred ecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence 999953 33333332 48999999987532 1 22445578999999999988843 2 245
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||...... + + ...|+.|
T Consensus 129 ~~iv~~sS~~~~~~---------~-----------------------------------------------~-~~~y~~s 151 (257)
T PRK07074 129 GAVVNIGSVNGMAA---------L-----------------------------------------------G-HPAYSAA 151 (257)
T ss_pred eEEEEEcchhhcCC---------C-----------------------------------------------C-CcccHHH
Confidence 68999998643211 0 0 1259999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHH
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..|.+++.+ ..+++++++||+.+.++.... .......+...... .....++++++|++
T Consensus 152 K~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~------~~~~~~~~~~~~~~---------~~~~~~~~~~~d~a 216 (257)
T PRK07074 152 KAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEA------RVAANPQVFEELKK---------WYPLQDFATPDDVA 216 (257)
T ss_pred HHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhc------ccccChHHHHHHHh---------cCCCCCCCCHHHHH
Confidence 99999888765 247999999999998764211 00001111111111 11235789999999
Q ss_pred HHHHHHHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhh
Q 008324 310 NAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFV 350 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~ 350 (570)
++++.++.... ....+.++++.++ ......|+++.+.+
T Consensus 217 ~~~~~l~~~~~-~~~~g~~~~~~~g--~~~~~~~~~~~~~~ 254 (257)
T PRK07074 217 NAVLFLASPAA-RAITGVCLPVDGG--LTAGNREMARTLTL 254 (257)
T ss_pred HHHHHHcCchh-cCcCCcEEEeCCC--cCcCChhhhhhhcc
Confidence 99999885322 2223678888887 66778898887654
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=9.8e-15 Score=148.03 Aligned_cols=212 Identities=15% Similarity=0.078 Sum_probs=137.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||++++++|++.| .+|++..|+.... +++. +.++.. ..++.+
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G---~~Vv~~~r~~~~l---~~~~---------~~l~~~---------~~~~~~ 59 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRG---ARVVLGDVDKPGL---RQAV---------NHLRAE---------GFDVHG 59 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHH---------HHHHhc---------CCeEEE
Confidence 679999999999999999999999998 5677777764321 1111 111111 235778
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~ 152 (570)
+.+|++++ +..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++++.+.. + .
T Consensus 60 ~~~Dv~d~-------~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~ 132 (275)
T PRK05876 60 VMCDVRHR-------EEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQ 132 (275)
T ss_pred EeCCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 99999953 3333333 358999999997432 134566789999999999988753 1 1
Q ss_pred C-ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 153 K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 153 ~-l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+ -.++|++||...+... +....|
T Consensus 133 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 156 (275)
T PRK05876 133 GTGGHVVFTASFAGLVPN--------------------------------------------------------AGLGAY 156 (275)
T ss_pred CCCCEEEEeCChhhccCC--------------------------------------------------------CCCchH
Confidence 2 4579999987544211 123579
Q ss_pred HHHHHH----HHHHHHHh-ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTM----GEMLMQQS-KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~----aE~lv~~~-~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+. +|.+..++ ..++++++++|+.|.++.......... ............+......++++++
T Consensus 157 ~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (275)
T PRK05876 157 GVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRG---------AACAQSSTTGSPGPLPLQDDNLGVD 227 (275)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcC---------ccccccccccccccccccccCCCHH
Confidence 999996 55555555 458999999999988764321100000 0000000011223333456789999
Q ss_pred HHHHHHHHHHH
Q 008324 307 MVVNAMIVAMV 317 (570)
Q Consensus 307 dva~aii~a~~ 317 (570)
|||++++.++.
T Consensus 228 dva~~~~~ai~ 238 (275)
T PRK05876 228 DIAQLTADAIL 238 (275)
T ss_pred HHHHHHHHHHH
Confidence 99999999885
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.7e-15 Score=146.88 Aligned_cols=209 Identities=12% Similarity=0.125 Sum_probs=142.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+||||||||+||..++++|++.| .+|+++.|+..... +.+. ++ . ...+..
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~G---~~v~~~~r~~~~~~--~~~~-~~---------~-----------~~~~~~ 58 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAARG---ARVALIGRGAAPLS--QTLP-GV---------P-----------ADALRI 58 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHCC---CeEEEEeCChHhHH--HHHH-HH---------h-----------hcCceE
Confidence 578999999999999999999999998 67899999653221 1111 10 0 134567
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|++++ +..+.++ .++|+|||+|+.... .+.++..+++|+.|+.++++.+.+. .
T Consensus 59 ~~~D~~~~-------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 131 (239)
T PRK12828 59 GGIDLVDP-------QAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTAS 131 (239)
T ss_pred EEeecCCH-------HHHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhc
Confidence 78999853 3232333 368999999986432 2335566889999999999887532 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+.+++|++||...+.... ....|+
T Consensus 132 ~~~~iv~~sS~~~~~~~~--------------------------------------------------------~~~~y~ 155 (239)
T PRK12828 132 GGGRIVNIGAGAALKAGP--------------------------------------------------------GMGAYA 155 (239)
T ss_pred CCCEEEEECchHhccCCC--------------------------------------------------------CcchhH
Confidence 578999999986543211 124699
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.+|+..+.+++.. ..++++.++||+.|+++..... . + ......+++++|
T Consensus 156 ~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~--------~----------------~--~~~~~~~~~~~d 209 (239)
T PRK12828 156 AAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD--------M----------------P--DADFSRWVTPEQ 209 (239)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc--------C----------------C--chhhhcCCCHHH
Confidence 9999888887654 3479999999999998632110 0 0 001122689999
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|+++..++...... -.++.+++.++
T Consensus 210 va~~~~~~l~~~~~~-~~g~~~~~~g~ 235 (239)
T PRK12828 210 IAAVIAFLLSDEAQA-ITGASIPVDGG 235 (239)
T ss_pred HHHHHHHHhCccccc-ccceEEEecCC
Confidence 999998887532211 13678888776
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.9e-15 Score=147.34 Aligned_cols=222 Identities=17% Similarity=0.132 Sum_probs=144.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++|+||||||+||+++++.|++.| .+|+++.|+..... .+. +.+.. ..++.+
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G---~~V~~~~r~~~~~~---~~~---------~~~~~----------~~~~~~ 57 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEG---ARVVVTDRNEEAAE---RVA---------AEILA----------GGRAIA 57 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHH---HHH---------HHHhc----------CCeEEE
Confidence 578999999999999999999999988 57899999863321 111 11110 145788
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHHc---
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f--------~~~~~~~~~~Nv~gt~~ll~la~~~--- 151 (570)
+.+|++++ +..+.++ ..+|+|||+|+.... .+.++..+++|+.|+.++++.+...
T Consensus 58 ~~~D~~~~-------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 130 (251)
T PRK07231 58 VAADVSDE-------ADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRG 130 (251)
T ss_pred EECCCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh
Confidence 99999953 3333333 357999999987421 1345677899999988888777642
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+.++||++||..+..... ....|
T Consensus 131 ~~~~~iv~~sS~~~~~~~~--------------------------------------------------------~~~~y 154 (251)
T PRK07231 131 EGGGAIVNVASTAGLRPRP--------------------------------------------------------GLGWY 154 (251)
T ss_pred cCCcEEEEEcChhhcCCCC--------------------------------------------------------CchHH
Confidence 2567899999986654321 12469
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+++.+ ..+++++.++|+.+.++...... .. ... ........+ .....+++++
T Consensus 155 ~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~---~~-~~~-~~~~~~~~~---------~~~~~~~~~~ 220 (251)
T PRK07231 155 NASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFM---GE-PTP-ENRAKFLAT---------IPLGRLGTPE 220 (251)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhh---cc-cCh-HHHHHHhcC---------CCCCCCcCHH
Confidence 99998888877654 23899999999999765432111 10 000 111111111 1123468999
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|.+++.++..... ...+.++.+.++
T Consensus 221 dva~~~~~l~~~~~~-~~~g~~~~~~gg 247 (251)
T PRK07231 221 DIANAALFLASDEAS-WITGVTLVVDGG 247 (251)
T ss_pred HHHHHHHHHhCcccc-CCCCCeEEECCC
Confidence 999999998853222 223567777665
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.2e-15 Score=149.40 Aligned_cols=228 Identities=17% Similarity=0.181 Sum_probs=141.4
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+.+||+|+||||||+||++++++|++.| .+|+++.|+.... +.+. +.+....+ ...+.
T Consensus 1 ~~~~k~vlItGas~giG~~~a~~l~~~g---~~v~~~~r~~~~~---~~~~---------~~l~~~~~-------~~~~~ 58 (256)
T PRK09186 1 MLKGKTILITGAGGLIGSALVKAILEAG---GIVIAADIDKEAL---NELL---------ESLGKEFK-------SKKLS 58 (256)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEecChHHH---HHHH---------HHHHhhcC-------CCcee
Confidence 3578999999999999999999999998 5678888765322 1111 11211111 23567
Q ss_pred EEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCC------cc----ccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITK------FD----ERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~------f~----~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
++.+|++++ +....+++ .+|+|||+|+... +. +.+...+++|+.++..+++.+...
T Consensus 59 ~~~~Dl~d~-------~~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 131 (256)
T PRK09186 59 LVELDITDQ-------ESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKY 131 (256)
T ss_pred EEEecCCCH-------HHHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 789999954 33333333 3899999997531 11 335667889998888777665432
Q ss_pred ---cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 008324 152 ---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (570)
Q Consensus 152 ---~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
.+..++|++||.+........+ +.+ .+ ...+
T Consensus 132 ~~~~~~~~iv~~sS~~~~~~~~~~~----~~~-~~-----------------------------------------~~~~ 165 (256)
T PRK09186 132 FKKQGGGNLVNISSIYGVVAPKFEI----YEG-TS-----------------------------------------MTSP 165 (256)
T ss_pred HHhcCCceEEEEechhhhccccchh----ccc-cc-----------------------------------------cCCc
Confidence 2557999999976543211000 000 00 0123
Q ss_pred chHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeee
Q 008324 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..|.+.+.. ..++.+++++|+.+.+... ..+...... . . ....++
T Consensus 166 ~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~-------------~~~~~~~~~-~---~-----~~~~~~ 223 (256)
T PRK09186 166 VEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP-------------EAFLNAYKK-C---C-----NGKGML 223 (256)
T ss_pred chhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC-------------HHHHHHHHh-c---C-----CccCCC
Confidence 47999999999987643 3579999999998765321 011111111 0 0 012468
Q ss_pred ehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++|+|++++.++.+... ...++++++.++
T Consensus 224 ~~~dva~~~~~l~~~~~~-~~~g~~~~~~~g 253 (256)
T PRK09186 224 DPDDICGTLVFLLSDQSK-YITGQNIIVDDG 253 (256)
T ss_pred CHHHhhhhHhheeccccc-cccCceEEecCC
Confidence 999999999998853322 223667777665
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.4e-15 Score=148.49 Aligned_cols=229 Identities=17% Similarity=0.201 Sum_probs=146.5
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+.++|+||||||||+||++++++|++.| .+|+++.|+... .+.+.++ +... ..++.
T Consensus 2 ~l~~k~vlItGa~~~IG~~la~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~ 57 (258)
T PRK07890 2 LLKGKVVVVSGVGPGLGRTLAVRAARAG---ADVVLAARTAER---LDEVAAE---------IDDL---------GRRAL 57 (258)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcC---CEEEEEeCCHHH---HHHHHHH---------HHHh---------CCceE
Confidence 5678999999999999999999999998 578888886532 1222211 1110 24678
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHHc--
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKKC-- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~----f----~~~~~~~~~~Nv~gt~~ll~la~~~-- 151 (570)
.+.+|++++ +..+.++ .++|+|||+|+... + .+.++..+++|+.|+..+++.+...
T Consensus 58 ~~~~D~~~~-------~~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 130 (258)
T PRK07890 58 AVPTDITDE-------DQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALA 130 (258)
T ss_pred EEecCCCCH-------HHHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 899999953 3222222 46899999998642 1 1345677899999999999998752
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+...++|++||....... +..+.|
T Consensus 131 ~~~~~ii~~sS~~~~~~~--------------------------------------------------------~~~~~Y 154 (258)
T PRK07890 131 ESGGSIVMINSMVLRHSQ--------------------------------------------------------PKYGAY 154 (258)
T ss_pred hCCCEEEEEechhhccCC--------------------------------------------------------CCcchh
Confidence 123589999987543211 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccc-cCcc-chHHHHHHHhcCCceeeecCCCeeeeeee
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWV-EDLK-TINTLFVASAQGNLRCLVGETKVIMDVIP 304 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~-~~~~-~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
+.+|+..|.+++.+ ..+++++++||+.|+++...+.-.+. .... ............ .....+.+
T Consensus 155 ~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 225 (258)
T PRK07890 155 KMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAAN---------SDLKRLPT 225 (258)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhc---------CCccccCC
Confidence 99999999998866 24799999999999997532111100 0000 001111111111 11224678
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++|++++++.++...... -.++++.+.++
T Consensus 226 ~~dva~a~~~l~~~~~~~-~~G~~i~~~gg 254 (258)
T PRK07890 226 DDEVASAVLFLASDLARA-ITGQTLDVNCG 254 (258)
T ss_pred HHHHHHHHHHHcCHhhhC-ccCcEEEeCCc
Confidence 899999998877532221 12566666554
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.65 E-value=9e-15 Score=144.86 Aligned_cols=220 Identities=16% Similarity=0.186 Sum_probs=141.7
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|++.| .+|+++.|+.... .+.+. +.++.. ..++..
T Consensus 3 ~~~~~vlItG~sg~iG~~l~~~l~~~G---~~v~~~~~~~~~~--~~~~~---------~~~~~~---------~~~~~~ 59 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQG---ANVVINYASSEAG--AEALV---------AEIGAL---------GGKALA 59 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCchhH--HHHHH---------HHHHhc---------CCceEE
Confidence 367999999999999999999999988 5677777754321 11111 111110 256888
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f~-------~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|++++ +....++ .++|+|||+||..... +.+...+++|+.++.++++.+... .
T Consensus 60 ~~~Dl~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 132 (248)
T PRK05557 60 VQGDVSDA-------ESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQ 132 (248)
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 99999953 3222322 3689999999875321 335567889999999999888753 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+.++||++||....... +....|+
T Consensus 133 ~~~~~v~iss~~~~~~~--------------------------------------------------------~~~~~y~ 156 (248)
T PRK05557 133 RSGRIINISSVVGLMGN--------------------------------------------------------PGQANYA 156 (248)
T ss_pred CCeEEEEEcccccCcCC--------------------------------------------------------CCCchhH
Confidence 45689999986432211 1135699
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.+|+..|.+++.+ ..+++++++||+.+.++...+.. .........+. ....+++++|
T Consensus 157 ~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~---------~~~~~~~~~~~---------~~~~~~~~~~ 218 (248)
T PRK05557 157 ASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALP---------EDVKEAILAQI---------PLGRLGQPEE 218 (248)
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccC---------hHHHHHHHhcC---------CCCCCcCHHH
Confidence 9999988877654 34799999999988654332210 11111111111 0113468899
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++++..++... .....+++|++.++
T Consensus 219 va~~~~~l~~~~-~~~~~g~~~~i~~~ 244 (248)
T PRK05557 219 IASAVAFLASDE-AAYITGQTLHVNGG 244 (248)
T ss_pred HHHHHHHHcCcc-cCCccccEEEecCC
Confidence 999988776421 12223689999875
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.2e-15 Score=149.63 Aligned_cols=159 Identities=16% Similarity=0.206 Sum_probs=114.1
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+|+||||||+||++++++|++.| .+|+++.|+... +. ++ . ..++.++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G---~~V~~~~r~~~~------l~-~~---------~-----------~~~~~~~ 51 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQG---YTVYGAARRVDK------ME-DL---------A-----------SLGVHPL 51 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHH------HH-HH---------H-----------hCCCeEE
Confidence 57999999999999999999999988 678888886422 11 11 0 1357789
Q ss_pred eccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHH----HHHHcc
Q 008324 91 PGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVN----FAKKCV 152 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f~-------~~~~~~~~~Nv~gt~~ll~----la~~~~ 152 (570)
.+|+++ .+..+.+++ ++|+|||+||..... +.++..+++|+.|+..+++ .+++.
T Consensus 52 ~~Dv~~-------~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~- 123 (273)
T PRK06182 52 SLDVTD-------EASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQ- 123 (273)
T ss_pred EeeCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhc-
Confidence 999995 333334433 689999999975431 3456778999999655544 44443
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... +....|+
T Consensus 124 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 147 (273)
T PRK06182 124 RSGRIINISSMGGKIYT--------------------------------------------------------PLGAWYH 147 (273)
T ss_pred CCCEEEEEcchhhcCCC--------------------------------------------------------CCccHhH
Confidence 55789999996432110 1234699
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCC
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~ 263 (570)
.||+..+.+.+.. ..+++++++||+.|.++.
T Consensus 148 ~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 183 (273)
T PRK06182 148 ATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEW 183 (273)
T ss_pred HHHHHHHHHHHHHHHHhcccCCEEEEEecCCccccc
Confidence 9999999986543 358999999999998764
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.64 E-value=8.5e-15 Score=144.65 Aligned_cols=225 Identities=19% Similarity=0.197 Sum_probs=152.4
Q ss_pred EEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccC
Q 008324 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (570)
Q Consensus 15 VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl 94 (570)
|+||||||.+|+.+++.|++.+ .+|.+++|+.+.. ..+.++ ...++.+.+|+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~---~~V~~l~R~~~~~-~~~~l~------------------------~~g~~vv~~d~ 52 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAG---FSVRALVRDPSSD-RAQQLQ------------------------ALGAEVVEADY 52 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT---GCEEEEESSSHHH-HHHHHH------------------------HTTTEEEES-T
T ss_pred CEEECCccHHHHHHHHHHHhCC---CCcEEEEeccchh-hhhhhh------------------------cccceEeeccc
Confidence 7999999999999999999966 6789999987322 112222 14567889999
Q ss_pred CCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCCcccc
Q 008324 95 SSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLIL 174 (570)
Q Consensus 95 ~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~g~i~ 174 (570)
. +.+.+...++++|+||.+-+... .. -.....+++++|++. ++++||+.|....+....+
T Consensus 53 ~-------~~~~l~~al~g~d~v~~~~~~~~-~~--------~~~~~~~li~Aa~~a-gVk~~v~ss~~~~~~~~~~--- 112 (233)
T PF05368_consen 53 D-------DPESLVAALKGVDAVFSVTPPSH-PS--------ELEQQKNLIDAAKAA-GVKHFVPSSFGADYDESSG--- 112 (233)
T ss_dssp T--------HHHHHHHHTTCSEEEEESSCSC-CC--------HHHHHHHHHHHHHHH-T-SEEEESEESSGTTTTTT---
T ss_pred C-------CHHHHHHHHcCCceEEeecCcch-hh--------hhhhhhhHHHhhhcc-ccceEEEEEeccccccccc---
Confidence 9 56666789999999998877543 11 233567899999998 7999997554332211100
Q ss_pred cccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC-chHHHHHHHHHHHHHHhccCCcEEE
Q 008324 175 ENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP-NTYVFTKTMGEMLMQQSKENLSLVI 253 (570)
Q Consensus 175 E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-n~Y~~sK~~aE~lv~~~~~~lp~~I 253 (570)
..| ...-..|...|+.+++ .++++++
T Consensus 113 ---------------------------------------------------~~p~~~~~~~k~~ie~~l~~--~~i~~t~ 139 (233)
T PF05368_consen 113 ---------------------------------------------------SEPEIPHFDQKAEIEEYLRE--SGIPYTI 139 (233)
T ss_dssp ---------------------------------------------------STTHHHHHHHHHHHHHHHHH--CTSEBEE
T ss_pred ---------------------------------------------------ccccchhhhhhhhhhhhhhh--cccccee
Confidence 111 2244578889999888 5999999
Q ss_pred EecCceecCCCCCCCccccCccchHHHHHHHhcC-CceeeecCCCeeeeee-ehHHHHHHHHHHHHHhhCCCCCCceEEe
Q 008324 254 IRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQG-NLRCLVGETKVIMDVI-PVDMVVNAMIVAMVAHAKQPSDANIYHV 331 (570)
Q Consensus 254 vRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G-~~~~~~~~~~~~~d~V-pVDdva~aii~a~~~~~~~~~~~~iyni 331 (570)
+||++.+...-.+..++.+ .... ....++++++....++ ..+|++++...++... .....++.+.+
T Consensus 140 i~~g~f~e~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p-~~~~~~~~~~~ 207 (233)
T PF05368_consen 140 IRPGFFMENLLPPFAPVVD-----------IKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDP-EKHNNGKTIFL 207 (233)
T ss_dssp EEE-EEHHHHHTTTHHTTC-----------SCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSG-GGTTEEEEEEE
T ss_pred ccccchhhhhhhhhccccc-----------ccccceEEEEccCCCccccccccHHHHHHHHHHHHcCh-HHhcCCEEEEe
Confidence 9999866543322222111 1111 1235677777666665 9999999999888743 22213577887
Q ss_pred cCCCCCcccHHHHHHHHhhhcccC
Q 008324 332 GSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 332 ~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
++ ..+|+.|+++.+.+..|+.
T Consensus 208 ~~---~~~t~~eia~~~s~~~G~~ 228 (233)
T PF05368_consen 208 AG---ETLTYNEIAAILSKVLGKK 228 (233)
T ss_dssp GG---GEEEHHHHHHHHHHHHTSE
T ss_pred CC---CCCCHHHHHHHHHHHHCCc
Confidence 66 5799999999999998864
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1e-14 Score=144.57 Aligned_cols=216 Identities=14% Similarity=0.158 Sum_probs=144.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++|++++||||+|+||+++++.|++.| .+|+++.|+... .+.+.+ . .+..+
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~g---~~V~~~~r~~~~---~~~~~~-------------~----------~~~~~ 57 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQRG---ARVVAAARNAAA---LDRLAG-------------E----------TGCEP 57 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHH-------------H----------hCCeE
Confidence 578999999999999999999999988 578888886422 111110 0 13457
Q ss_pred EeccCCCCCCCCCchhhHHHHh---CCccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHHHcc---C-ce
Q 008324 90 VPGDISSEDLGLKDSNLKEELW---NELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAKKCV---K-LK 155 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~---~~vdiViH~AA~v~f~-------~~~~~~~~~Nv~gt~~ll~la~~~~---~-l~ 155 (570)
+.+|+++ .+..+.++ ..+|+|||+||..... +.++..+++|+.|+.++++.+.+.. + ..
T Consensus 58 ~~~D~~~-------~~~v~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 130 (245)
T PRK07060 58 LRLDVGD-------DAAIRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGG 130 (245)
T ss_pred EEecCCC-------HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCc
Confidence 8899985 33333443 3589999999975421 3456668899999999999887631 1 36
Q ss_pred EEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHH
Q 008324 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (570)
Q Consensus 156 ~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
+||++||...+... .....|+.||
T Consensus 131 ~iv~~sS~~~~~~~--------------------------------------------------------~~~~~y~~sK 154 (245)
T PRK07060 131 SIVNVSSQAALVGL--------------------------------------------------------PDHLAYCASK 154 (245)
T ss_pred EEEEEccHHHcCCC--------------------------------------------------------CCCcHhHHHH
Confidence 89999987544321 1135799999
Q ss_pred HHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHH
Q 008324 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (570)
Q Consensus 236 ~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ 310 (570)
+.+|.+++.+ ..+++++.+||+.+.++.... -|.+ ... ....... .....+++++|+++
T Consensus 155 ~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~--~~~~----~~~-~~~~~~~---------~~~~~~~~~~d~a~ 218 (245)
T PRK07060 155 AALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAE--AWSD----PQK-SGPMLAA---------IPLGRFAEVDDVAA 218 (245)
T ss_pred HHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhh--hccC----HHH-HHHHHhc---------CCCCCCCCHHHHHH
Confidence 9999988765 247999999999998865321 1211 000 0011110 01234789999999
Q ss_pred HHHHHHHHhhCCCCCCceEEecCC
Q 008324 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++.++.... ....++++++.++
T Consensus 219 ~~~~l~~~~~-~~~~G~~~~~~~g 241 (245)
T PRK07060 219 PILFLLSDAA-SMVSGVSLPVDGG 241 (245)
T ss_pred HHHHHcCccc-CCccCcEEeECCC
Confidence 9998875332 2234778888765
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.2e-14 Score=148.09 Aligned_cols=198 Identities=16% Similarity=0.135 Sum_probs=128.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++||||||+||||++++++|++.| .+|+++.|+... .++..+++ ... ..++.+
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G---~~V~~~~r~~~~---~~~~~~~~---------~~~---------~~~~~~ 59 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALG---MKLVLADVQQDA---LDRAVAEL---------RAQ---------GAEVLG 59 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCC---CEEEEEeCChHH---HHHHHHHH---------Hhc---------CCeEEE
Confidence 568999999999999999999999998 577888885422 11211111 100 246788
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc----c---ccHHHHHHHhHHHHHHHHHHHHH----c
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF----D---ERYDVAFGINTLGVIHLVNFAKK----C 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f----~---~~~~~~~~~Nv~gt~~ll~la~~----~ 151 (570)
+.+|+++ .+..+.+++ .+|+|||+||.... + +.++..+++|+.|+.++++++.. .
T Consensus 60 ~~~D~~d-------~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 132 (287)
T PRK06194 60 VRTDVSD-------AAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAA 132 (287)
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc
Confidence 9999995 333334443 58999999998642 1 34556689999999998777432 2
Q ss_pred cC-----ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCC
Q 008324 152 VK-----LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHG 226 (570)
Q Consensus 152 ~~-----l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 226 (570)
.. ..++|++||...+... +
T Consensus 133 ~~~~~~~~g~iv~~sS~~~~~~~--------------------------------------------------------~ 156 (287)
T PRK06194 133 AEKDPAYEGHIVNTASMAGLLAP--------------------------------------------------------P 156 (287)
T ss_pred CCCCCCCCeEEEEeCChhhccCC--------------------------------------------------------C
Confidence 11 1589999997655321 1
Q ss_pred CCchHHHHHHHHHHHHHHhc-------cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCee
Q 008324 227 WPNTYVFTKTMGEMLMQQSK-------ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVI 299 (570)
Q Consensus 227 ~~n~Y~~sK~~aE~lv~~~~-------~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~ 299 (570)
..+.|+.||+..|.+++.+. .++.+..+.|+.|..+... ...+....+.+++...
T Consensus 157 ~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~------------------~~~~~~~~~~~~~~~~ 218 (287)
T PRK06194 157 AMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQ------------------SERNRPADLANTAPPT 218 (287)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcccc------------------ccccCchhcccCcccc
Confidence 13569999999999987652 2355566666655443221 1111222344555666
Q ss_pred eeeeehHHHHHHH
Q 008324 300 MDVIPVDMVVNAM 312 (570)
Q Consensus 300 ~d~VpVDdva~ai 312 (570)
.+++++++++.++
T Consensus 219 ~~~~~~~~~~~~~ 231 (287)
T PRK06194 219 RSQLIAQAMSQKA 231 (287)
T ss_pred chhhHHHHHHHhh
Confidence 7777777776654
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.6e-14 Score=145.79 Aligned_cols=159 Identities=13% Similarity=0.209 Sum_probs=119.1
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++++|+||||||+||++++++|++.| .+|+++.|+...... ..++.++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g---~~V~~~~r~~~~~~~-----------------------------~~~~~~~ 50 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAG---YRVFGTSRNPARAAP-----------------------------IPGVELL 50 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCC---CEEEEEeCChhhccc-----------------------------cCCCeeE
Confidence 46899999999999999999999998 678888886532110 2467889
Q ss_pred eccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--cC
Q 008324 91 PGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--VK 153 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~ 153 (570)
.+|++++ +..+.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+.. + .+
T Consensus 51 ~~D~~d~-------~~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~ 123 (270)
T PRK06179 51 ELDVTDD-------ASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG 123 (270)
T ss_pred EeecCCH-------HHHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 9999953 33334443 47999999997543 134567789999999999887633 1 26
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||....... +....|+.
T Consensus 124 ~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~ 147 (270)
T PRK06179 124 SGRIINISSVLGFLPA--------------------------------------------------------PYMALYAA 147 (270)
T ss_pred CceEEEECCccccCCC--------------------------------------------------------CCccHHHH
Confidence 7899999997543211 12357999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCC
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYK 264 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ 264 (570)
||+..|.+++.. ..++++++++|+.+.++..
T Consensus 148 sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~ 183 (270)
T PRK06179 148 SKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFD 183 (270)
T ss_pred HHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccc
Confidence 999999887764 3589999999999988654
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=4e-14 Score=140.75 Aligned_cols=220 Identities=16% Similarity=0.103 Sum_probs=136.4
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+++++||||||+||++++++|++.| ..|++..|.... ..+.+. +.++.. ..++.++.
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G---~~vv~~~~~~~~--~~~~~~---------~~l~~~---------~~~~~~~~ 58 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERG---YAVCLNYLRNRD--AAEAVV---------QAIRRQ---------GGEALAVA 58 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC---CeEEEecCCCHH--HHHHHH---------HHHHhC---------CCcEEEEE
Confidence 5789999999999999999999988 455555433211 111111 111110 24577899
Q ss_pred ccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc----c----ccHHHHHHHhHHHHHHHHHHHHHc-c-C-
Q 008324 92 GDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF----D----ERYDVAFGINTLGVIHLVNFAKKC-V-K- 153 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f----~----~~~~~~~~~Nv~gt~~ll~la~~~-~-~- 153 (570)
+|+++ .+..+.++ ..+|+|||+|+.... . +.++..+++|+.|+.++++.+.+. . +
T Consensus 59 ~Dl~~-------~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 131 (248)
T PRK06123 59 ADVAD-------EADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRH 131 (248)
T ss_pred eccCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 99995 33333333 368999999987531 1 235577999999999998887642 1 1
Q ss_pred ---ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 154 ---LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 154 ---l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
-.++|++||........ .....
T Consensus 132 ~~~~g~iv~~sS~~~~~~~~-------------------------------------------------------~~~~~ 156 (248)
T PRK06123 132 GGRGGAIVNVSSMAARLGSP-------------------------------------------------------GEYID 156 (248)
T ss_pred CCCCeEEEEECchhhcCCCC-------------------------------------------------------CCccc
Confidence 23689999874322111 11135
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..|.+++.+ ..+++++++||+.|+++..... . ....+........ . .-...+
T Consensus 157 Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~-------~-~~~~~~~~~~~~p----~-----~~~~~~ 219 (248)
T PRK06123 157 YAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASG-------G-EPGRVDRVKAGIP----M-----GRGGTA 219 (248)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhcc-------C-CHHHHHHHHhcCC----C-----CCCcCH
Confidence 999999999988755 3479999999999998753210 0 1111111111110 0 011367
Q ss_pred HHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++++.++.... ....+++|++.++
T Consensus 220 ~d~a~~~~~l~~~~~-~~~~g~~~~~~gg 247 (248)
T PRK06123 220 EEVARAILWLLSDEA-SYTTGTFIDVSGG 247 (248)
T ss_pred HHHHHHHHHHhCccc-cCccCCEEeecCC
Confidence 999999998775322 1223678988764
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.8e-14 Score=141.09 Aligned_cols=202 Identities=15% Similarity=0.168 Sum_probs=130.9
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+++||||||+||++++++|++. .+|+++.|+.... +.+. ++ ...+.++.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~----~~V~~~~r~~~~~---~~~~-------------~~---------~~~~~~~~ 53 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT----HTLLLGGRPAERL---DELA-------------AE---------LPGATPFP 53 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh----CCEEEEeCCHHHH---HHHH-------------HH---------hccceEEe
Confidence 579999999999999999999986 4578898874221 1111 00 13577899
Q ss_pred ccCCCCCCCCCchhhHHHHhC---CccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHH----HHHHccCceEE
Q 008324 92 GDISSEDLGLKDSNLKEELWN---ELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVN----FAKKCVKLKVF 157 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~---~vdiViH~AA~v~f~-------~~~~~~~~~Nv~gt~~ll~----la~~~~~l~~~ 157 (570)
+|+++ .+..+.+++ ++|+|||+|+..... +.+...+++|+.++.++.+ .+++ ...++
T Consensus 54 ~D~~~-------~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~ 124 (227)
T PRK08219 54 VDLTD-------PEAIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRA--AHGHV 124 (227)
T ss_pred cCCCC-------HHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--CCCeE
Confidence 99994 444445554 599999999875321 2355668899999555444 4443 34689
Q ss_pred EEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHH
Q 008324 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (570)
Q Consensus 158 V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~ 237 (570)
|++||....+... ....|+.+|..
T Consensus 125 v~~ss~~~~~~~~--------------------------------------------------------~~~~y~~~K~a 148 (227)
T PRK08219 125 VFINSGAGLRANP--------------------------------------------------------GWGSYAASKFA 148 (227)
T ss_pred EEEcchHhcCcCC--------------------------------------------------------CCchHHHHHHH
Confidence 9999876543211 12469999999
Q ss_pred HHHHHHHh---ccC-CcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHH
Q 008324 238 GEMLMQQS---KEN-LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (570)
Q Consensus 238 aE~lv~~~---~~~-lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii 313 (570)
.|.+++.. ..+ +++..++|+.+.++... .+... .+. ......+++++|++++++
T Consensus 149 ~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~-------------~~~~~--~~~-------~~~~~~~~~~~dva~~~~ 206 (227)
T PRK08219 149 LRALADALREEEPGNVRVTSVHPGRTDTDMQR-------------GLVAQ--EGG-------EYDPERYLRPETVAKAVR 206 (227)
T ss_pred HHHHHHHHHHHhcCCceEEEEecCCccchHhh-------------hhhhh--hcc-------ccCCCCCCCHHHHHHHHH
Confidence 89887754 234 88888888876543211 00000 010 011235799999999999
Q ss_pred HHHHHhhCCCCCCceEEecC
Q 008324 314 VAMVAHAKQPSDANIYHVGS 333 (570)
Q Consensus 314 ~a~~~~~~~~~~~~iyni~s 333 (570)
.++... ..+.+|++.-
T Consensus 207 ~~l~~~----~~~~~~~~~~ 222 (227)
T PRK08219 207 FAVDAP----PDAHITEVVV 222 (227)
T ss_pred HHHcCC----CCCccceEEE
Confidence 988522 2256777653
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.6e-14 Score=144.64 Aligned_cols=228 Identities=11% Similarity=0.057 Sum_probs=142.7
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|+||||+|+||+++++.|++.| .+|+++.|+.... +.+. +.++...+ ..++.++.
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g---~~vi~~~r~~~~~---~~~~---------~~~~~~~~-------~~~~~~~~ 59 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEG---YRVAVADINSEKA---ANVA---------QEINAEYG-------EGMAYGFG 59 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHH---------HHHHHhcC-------CceeEEEE
Confidence 6899999999999999999999988 5778888865321 1111 11111111 13588999
Q ss_pred ccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---cC-
Q 008324 92 GDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK- 153 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~- 153 (570)
+|++++ +..+.++ ..+|+|||+||.... .+.++..+++|+.|+..+++.+.+. ++
T Consensus 60 ~D~~~~-------~~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~ 132 (259)
T PRK12384 60 ADATSE-------QSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGI 132 (259)
T ss_pred ccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCC
Confidence 999953 3222332 358999999986531 1345677899999999888877552 23
Q ss_pred ceEEEEEeccee-ecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 154 LKVFVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 154 l~~~V~vSTa~v-~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
-.++|++||... ++. .....|+
T Consensus 133 ~~~iv~~ss~~~~~~~---------------------------------------------------------~~~~~Y~ 155 (259)
T PRK12384 133 QGRIIQINSKSGKVGS---------------------------------------------------------KHNSGYS 155 (259)
T ss_pred CcEEEEecCcccccCC---------------------------------------------------------CCCchhH
Confidence 358999988542 110 1124699
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhc--CCceeeecCCCeeeeeeeh
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQ--GNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~--G~~~~~~~~~~~~~d~VpV 305 (570)
.||+..+.+++.+ ..++++.++||+.++++... .+.+. .+....+. +.......+......+++.
T Consensus 156 ~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~--~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (259)
T PRK12384 156 AAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMF--QSLLP------QYAKKLGIKPDEVEQYYIDKVPLKRGCDY 227 (259)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhh--hhhhH------HHHHhcCCChHHHHHHHHHhCcccCCCCH
Confidence 9999988887654 36899999999988765321 00000 00000000 0000011122234567889
Q ss_pred HHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++++.++.... ..-.+++|++.++
T Consensus 228 ~dv~~~~~~l~~~~~-~~~~G~~~~v~~g 255 (259)
T PRK12384 228 QDVLNMLLFYASPKA-SYCTGQSINVTGG 255 (259)
T ss_pred HHHHHHHHHHcCccc-ccccCceEEEcCC
Confidence 999999988764322 2123789999887
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.6e-14 Score=146.67 Aligned_cols=229 Identities=18% Similarity=0.179 Sum_probs=142.9
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.++||+++||||+|+||++++++|++.| .+|+++.|..... +.+.++ .+. ..++.
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G---~~v~~~~~~~~~~---~~~~~~-------------~~~------~~~~~ 69 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHG---AKVCIVDLQDDLG---QNVCDS-------------LGG------EPNVC 69 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcC---CEEEEEeCCHHHH---HHHHHH-------------hcC------CCceE
Confidence 3678999999999999999999999998 6778887754221 111111 000 24688
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc---------cccHHHHHHHhHHHHHHHHHHHHH-c
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF---------DERYDVAFGINTLGVIHLVNFAKK-C 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f---------~~~~~~~~~~Nv~gt~~ll~la~~-~ 151 (570)
++.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+.. +
T Consensus 70 ~~~~Dl~d-------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~ 142 (280)
T PLN02253 70 FFHCDVTV-------EDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIM 142 (280)
T ss_pred EEEeecCC-------HHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHH
Confidence 99999995 33333433 368999999997531 134677899999999999987764 2
Q ss_pred --cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc
Q 008324 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (570)
Q Consensus 152 --~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
.+-.++|++||....-.. ..+.
T Consensus 143 ~~~~~g~ii~isS~~~~~~~--------------------------------------------------------~~~~ 166 (280)
T PLN02253 143 IPLKKGSIVSLCSVASAIGG--------------------------------------------------------LGPH 166 (280)
T ss_pred HhcCCceEEEecChhhcccC--------------------------------------------------------CCCc
Confidence 123478888875432110 1235
Q ss_pred hHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCC-CCccccCccchHHHHHHHhcCCceeeecCCCeeeeee
Q 008324 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEP-FPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (570)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep-~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
.|+.||+..|.+.+.+ ..++++.+++|+.|.++.... .+. . ......+..... ............+
T Consensus 167 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~---~-~~~~~~~~~~~~----~~~~~~~l~~~~~ 238 (280)
T PLN02253 167 AYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPE---D-ERTEDALAGFRA----FAGKNANLKGVEL 238 (280)
T ss_pred ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccccccccccc---c-cchhhhhhhhHH----HhhcCCCCcCCCC
Confidence 7999999999998765 347999999999998764311 111 0 000011110000 0000000011236
Q ss_pred ehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.++|+|++++.++.... ..-.++++++.++
T Consensus 239 ~~~dva~~~~~l~s~~~-~~i~G~~i~vdgG 268 (280)
T PLN02253 239 TVDDVANAVLFLASDEA-RYISGLNLMIDGG 268 (280)
T ss_pred CHHHHHHHHHhhcCccc-ccccCcEEEECCc
Confidence 78999999998875322 1123677888766
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.4e-14 Score=139.60 Aligned_cols=160 Identities=16% Similarity=0.224 Sum_probs=118.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++|+||||||+||+++++.|++.|. .+|+++.|+.+.... ...++.+
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~G~--~~V~~~~r~~~~~~~----------------------------~~~~~~~ 53 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLARGA--AKVYAAARDPESVTD----------------------------LGPRVVP 53 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCc--ccEEEEecChhhhhh----------------------------cCCceEE
Confidence 4689999999999999999999999883 278888887532110 0257889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC---CccEEEEcCcc-CC---c----cccHHHHHHHhHHHHHHHHHHHHHc---cCce
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN---ELDIMVNSAAI-TK---F----DERYDVAFGINTLGVIHLVNFAKKC---VKLK 155 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~---~vdiViH~AA~-v~---f----~~~~~~~~~~Nv~gt~~ll~la~~~---~~l~ 155 (570)
+.+|+++ .+..+.+.+ .+|+|||+||. .. + .+.+...+++|+.++.++++++.+. .+..
T Consensus 54 ~~~D~~~-------~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 126 (238)
T PRK08264 54 LQLDVTD-------PASVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGG 126 (238)
T ss_pred EEecCCC-------HHHHHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence 9999995 333334444 58999999997 22 1 2445667899999999999987642 2456
Q ss_pred EEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHH
Q 008324 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (570)
Q Consensus 156 ~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
+||++||...+... ...+.|+.||
T Consensus 127 ~~v~~sS~~~~~~~--------------------------------------------------------~~~~~y~~sK 150 (238)
T PRK08264 127 AIVNVLSVLSWVNF--------------------------------------------------------PNLGTYSASK 150 (238)
T ss_pred EEEEEcChhhccCC--------------------------------------------------------CCchHhHHHH
Confidence 89999987654321 1235799999
Q ss_pred HHHHHHHHHh-----ccCCcEEEEecCceecC
Q 008324 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGT 262 (570)
Q Consensus 236 ~~aE~lv~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
+.+|.+.... ..+++++++||+.+.++
T Consensus 151 ~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~ 182 (238)
T PRK08264 151 AAAWSLTQALRAELAPQGTRVLGVHPGPIDTD 182 (238)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeCCccccc
Confidence 9999888764 24799999999998765
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.6e-14 Score=142.12 Aligned_cols=170 Identities=16% Similarity=0.152 Sum_probs=116.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.| .+|+++.|+... .+.+. ++. ..++.+
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g---~~v~~~~r~~~~---~~~~~-------------~~~--------~~~~~~ 56 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEG---ARVAITGRDPAS---LEAAR-------------AEL--------GESALV 56 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEecCCHHH---HHHHH-------------HHh--------CCceEE
Confidence 468999999999999999999999998 577888886421 11111 111 246778
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHHHc-cCceEEEEEe
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVS 161 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~-------~~~~~~~~~Nv~gt~~ll~la~~~-~~l~~~V~vS 161 (570)
+.+|++++.--....+.......++|+|||+||...+. +.++..+++|+.|+.++++++... ....++|++|
T Consensus 57 ~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~ 136 (249)
T PRK06500 57 IRADAGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNG 136 (249)
T ss_pred EEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 89999953210000000111224689999999975431 345677899999999999999752 2334677776
Q ss_pred cce-eecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHH
Q 008324 162 TAY-VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (570)
Q Consensus 162 Ta~-v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~ 240 (570)
|.. .++. +..+.|+.||+..|.
T Consensus 137 S~~~~~~~---------------------------------------------------------~~~~~Y~~sK~a~~~ 159 (249)
T PRK06500 137 SINAHIGM---------------------------------------------------------PNSSVYAASKAALLS 159 (249)
T ss_pred chHhccCC---------------------------------------------------------CCccHHHHHHHHHHH
Confidence 643 2221 123579999999999
Q ss_pred HHHHh-----ccCCcEEEEecCceecCC
Q 008324 241 LMQQS-----KENLSLVIIRPTVVSGTY 263 (570)
Q Consensus 241 lv~~~-----~~~lp~~IvRPsiV~g~~ 263 (570)
+++.+ ..+++++++||+.+.++.
T Consensus 160 ~~~~la~e~~~~gi~v~~i~pg~~~t~~ 187 (249)
T PRK06500 160 LAKTLSGELLPRGIRVNAVSPGPVQTPL 187 (249)
T ss_pred HHHHHHHHhhhcCeEEEEEeeCcCCCHH
Confidence 99654 348999999999998864
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.8e-14 Score=142.35 Aligned_cols=202 Identities=18% Similarity=0.253 Sum_probs=135.6
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+++|+||||+|+||++++++|++.| .+|.++.|+.... +.+. +.++.. ..++..+.
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g---~~Vi~~~r~~~~~---~~~~---------~~l~~~---------~~~~~~~~ 56 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAG---AQLVLAARNETRL---ASLA---------QELADH---------GGEALVVP 56 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHH---------HHHHhc---------CCcEEEEE
Confidence 5789999999999999999999988 5788888864321 1111 111111 24678899
Q ss_pred ccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc---cc-----cHHHHHHHhHHHHHHHHHHHHHc--cCc
Q 008324 92 GDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF---DE-----RYDVAFGINTLGVIHLVNFAKKC--VKL 154 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f---~~-----~~~~~~~~Nv~gt~~ll~la~~~--~~l 154 (570)
+|+++ .+..+.++ .++|+|||+|+.... .+ .+...+++|+.|+.++++.+... ++.
T Consensus 57 ~Dl~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~ 129 (263)
T PRK06181 57 TDVSD-------AEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASR 129 (263)
T ss_pred ccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 99995 33333333 368999999987542 12 24566899999999999988642 245
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||...+... .....|+.|
T Consensus 130 ~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~s 153 (263)
T PRK06181 130 GQIVVVSSLAGLTGV--------------------------------------------------------PTRSGYAAS 153 (263)
T ss_pred CEEEEEecccccCCC--------------------------------------------------------CCccHHHHH
Confidence 689999987554321 113579999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHH
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..|.+.+.+ ..++++++++|+.|.++....... ..|.. ....+....++++++|+|
T Consensus 154 K~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~---------------~~~~~--~~~~~~~~~~~~~~~dva 216 (263)
T PRK06181 154 KHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALD---------------GDGKP--LGKSPMQESKIMSAEECA 216 (263)
T ss_pred HHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhcc---------------ccccc--cccccccccCCCCHHHHH
Confidence 99999988654 357999999999987764321100 00110 001111223789999999
Q ss_pred HHHHHHHH
Q 008324 310 NAMIVAMV 317 (570)
Q Consensus 310 ~aii~a~~ 317 (570)
++++.++.
T Consensus 217 ~~i~~~~~ 224 (263)
T PRK06181 217 EAILPAIA 224 (263)
T ss_pred HHHHHHhh
Confidence 99998885
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.2e-14 Score=145.44 Aligned_cols=223 Identities=14% Similarity=0.156 Sum_probs=147.3
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
..++||+|+||||+|+||.+++++|++.| .+|++..|+.... .+.+.+. +.. ...++
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G---~~V~l~~r~~~~~--~~~~~~~---------~~~---------~~~~~ 98 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEG---ADIAIVYLDEHED--ANETKQR---------VEK---------EGVKC 98 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCcchH--HHHHHHH---------HHh---------cCCeE
Confidence 34678999999999999999999999998 5777887764321 1111111 110 02467
Q ss_pred EEEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCC----cc----ccHHHHHHHhHHHHHHHHHHHHH-c
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK----FD----ERYDVAFGINTLGVIHLVNFAKK-C 151 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~----f~----~~~~~~~~~Nv~gt~~ll~la~~-~ 151 (570)
.++.+|++++ +..+.++ .++|+|||+|+... +. +.+...+++|+.|+.++++.+.. +
T Consensus 99 ~~~~~Dl~~~-------~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~ 171 (290)
T PRK06701 99 LLIPGDVSDE-------AFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHL 171 (290)
T ss_pred EEEEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 8899999953 3333333 35899999998642 11 33566789999999999999876 3
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+...++|++||...+.... ....|
T Consensus 172 ~~~g~iV~isS~~~~~~~~--------------------------------------------------------~~~~Y 195 (290)
T PRK06701 172 KQGSAIINTGSITGYEGNE--------------------------------------------------------TLIDY 195 (290)
T ss_pred hhCCeEEEEecccccCCCC--------------------------------------------------------Ccchh
Confidence 3335899999986553221 12459
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+++.+ ..+++++.++|+.|.++.... . .. ...+..+.. ......+..++
T Consensus 196 ~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~---~---~~--~~~~~~~~~---------~~~~~~~~~~~ 258 (290)
T PRK06701 196 SATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPS---D---FD--EEKVSQFGS---------NTPMQRPGQPE 258 (290)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccc---c---cC--HHHHHHHHh---------cCCcCCCcCHH
Confidence 99999999888765 247999999999998864321 0 00 111111111 11224467889
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++...... -.+.++++.++
T Consensus 259 dva~~~~~ll~~~~~~-~~G~~i~idgg 285 (290)
T PRK06701 259 ELAPAYVFLASPDSSY-ITGQMLHVNGG 285 (290)
T ss_pred HHHHHHHHHcCcccCC-ccCcEEEeCCC
Confidence 9999999887633221 23678888765
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=3e-14 Score=141.64 Aligned_cols=220 Identities=15% Similarity=0.175 Sum_probs=144.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||+|+||++++++|++.| .+|+++.|+.... +.+. +.++.. ..++.+
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G---~~v~~~~r~~~~~---~~~~---------~~~~~~---------~~~~~~ 60 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAG---ATVAFNDGLAAEA---RELA---------AALEAA---------GGRAHA 60 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcC---CEEEEEeCCHHHH---HHHH---------HHHHhc---------CCcEEE
Confidence 578999999999999999999999988 5677777764321 1111 111110 246889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 61 ~~~Dl~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 133 (250)
T PRK12939 61 IAADLADP-------ASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDS 133 (250)
T ss_pred EEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 99999953 3333333 468999999997532 1345667889999999999888652 1
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|++||....... .....|+
T Consensus 134 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~y~ 157 (250)
T PRK12939 134 GRGRIVNLASDTALWGA--------------------------------------------------------PKLGAYV 157 (250)
T ss_pred CCeEEEEECchhhccCC--------------------------------------------------------CCcchHH
Confidence 24589999996543211 1124699
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.+|+..|.+++.. ..++++++++|+.|.++.....+. .........+ .....+++++|
T Consensus 158 ~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~--------~~~~~~~~~~---------~~~~~~~~~~d 220 (250)
T PRK12939 158 ASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA--------DERHAYYLKG---------RALERLQVPDD 220 (250)
T ss_pred HHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC--------hHHHHHHHhc---------CCCCCCCCHHH
Confidence 9999999988754 357999999999887654321110 0111111111 12234688999
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++++.++.... ..-.++++++.++
T Consensus 221 va~~~~~l~~~~~-~~~~G~~i~~~gg 246 (250)
T PRK12939 221 VAGAVLFLLSDAA-RFVTGQLLPVNGG 246 (250)
T ss_pred HHHHHHHHhCccc-cCccCcEEEECCC
Confidence 9999999885322 2223678888776
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.6e-14 Score=140.40 Aligned_cols=219 Identities=14% Similarity=0.118 Sum_probs=142.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.| .+|+++.|+... ...+.+. + ...++..
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G---~~vi~~~r~~~~-~~~~~~~-------------~---------~~~~~~~ 56 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAG---ADIVGAGRSEPS-ETQQQVE-------------A---------LGRRFLS 56 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCchHH-HHHHHHH-------------h---------cCCceEE
Confidence 579999999999999999999999998 577888885421 1111111 0 0246889
Q ss_pred EeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|++++ +....+ ..++|+|||+||.... .+.++..+++|+.|+.++++.+... +
T Consensus 57 ~~~D~~~~-------~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 129 (248)
T TIGR01832 57 LTADLSDI-------EAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQ 129 (248)
T ss_pred EECCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 99999954 222222 2458999999997532 1346677899999999999987642 1
Q ss_pred C-ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 153 K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 153 ~-l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+ -.++|++||...+... .....|
T Consensus 130 ~~~g~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y 153 (248)
T TIGR01832 130 GRGGKIINIASMLSFQGG--------------------------------------------------------IRVPSY 153 (248)
T ss_pred CCCeEEEEEecHHhccCC--------------------------------------------------------CCCchh
Confidence 2 4689999997654321 112469
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+++.. ..++++++++|+.|.++..+.... ......... . ..+ ...++..+
T Consensus 154 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~-------~~~~~~~~~-~---~~~-----~~~~~~~~ 217 (248)
T TIGR01832 154 TASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRA-------DEDRNAAIL-E---RIP-----AGRWGTPD 217 (248)
T ss_pred HHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhcccc-------ChHHHHHHH-h---cCC-----CCCCcCHH
Confidence 99999999988765 347999999999998764321110 000000010 1 111 13568899
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++.... ..-.+.++.+.++
T Consensus 218 dva~~~~~l~s~~~-~~~~G~~i~~dgg 244 (248)
T TIGR01832 218 DIGGPAVFLASSAS-DYVNGYTLAVDGG 244 (248)
T ss_pred HHHHHHHHHcCccc-cCcCCcEEEeCCC
Confidence 99999988875322 1112455555443
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.6e-14 Score=143.24 Aligned_cols=220 Identities=15% Similarity=0.178 Sum_probs=141.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+.... ...++.+
T Consensus 7 ~~~k~vlItGas~gIG~~ia~~l~~~G---~~v~~~~r~~~~~------------------------------~~~~~~~ 53 (260)
T PRK06523 7 LAGKRALVTGGTKGIGAATVARLLEAG---ARVVTTARSRPDD------------------------------LPEGVEF 53 (260)
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHCC---CEEEEEeCChhhh------------------------------cCCceeE
Confidence 679999999999999999999999988 5788888864321 0246778
Q ss_pred EeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCC-----c----cccHHHHHHHhHHHHHHHHHHHHH-c-
Q 008324 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITK-----F----DERYDVAFGINTLGVIHLVNFAKK-C- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~-----f----~~~~~~~~~~Nv~gt~~ll~la~~-~- 151 (570)
+.+|++++ +..+.+ ...+|+|||+||... + .+.++..+++|+.|+.++++.+.. +
T Consensus 54 ~~~D~~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 126 (260)
T PRK06523 54 VAADLTTA-------EGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMI 126 (260)
T ss_pred EecCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHH
Confidence 99999953 322222 246899999998532 1 244677789999999888776543 1
Q ss_pred -cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+..++|++||........ .....
T Consensus 127 ~~~~g~ii~isS~~~~~~~~-------------------------------------------------------~~~~~ 151 (260)
T PRK06523 127 ARGSGVIIHVTSIQRRLPLP-------------------------------------------------------ESTTA 151 (260)
T ss_pred hcCCcEEEEEecccccCCCC-------------------------------------------------------CCcch
Confidence 1346799999875432100 12357
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCC-CccccCcc-chHHH---HHHHhcCCceeeecCCCeee
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPF-PGWVEDLK-TINTL---FVASAQGNLRCLVGETKVIM 300 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~-~gw~~~~~-~~~~~---i~~~~~G~~~~~~~~~~~~~ 300 (570)
|+.||+..|.+++.. ..++.+.+++|+.|.++..... +.+.+... ..... +.....+. + ..
T Consensus 152 Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p-----~~ 222 (260)
T PRK06523 152 YAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGI----P-----LG 222 (260)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccC----c-----cC
Confidence 999999999887765 3479999999999988643210 00000000 00000 11011111 1 11
Q ss_pred eeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 301 d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.+...+++++++..++..... .-.++++++.++
T Consensus 223 ~~~~~~~va~~~~~l~s~~~~-~~~G~~~~vdgg 255 (260)
T PRK06523 223 RPAEPEEVAELIAFLASDRAA-SITGTEYVIDGG 255 (260)
T ss_pred CCCCHHHHHHHHHHHhCcccc-cccCceEEecCC
Confidence 234678999999888753222 223678888776
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.1e-13 Score=138.58 Aligned_cols=221 Identities=11% Similarity=0.109 Sum_probs=140.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
..+|++|||||+|+||++++++|++.| .+|+++.|..... .+.+.++ ++.. ..++.+
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g---~~v~~~~~~~~~~--~~~~~~~---------~~~~---------~~~~~~ 63 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHG---FDVAVHYNRSRDE--AEALAAE---------IRAL---------GRRAVA 63 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCCHHH--HHHHHHH---------HHhc---------CCeEEE
Confidence 368999999999999999999999988 5677766643211 1111111 1110 246888
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc-c--
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-V-- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~-~-- 152 (570)
+.+|++++ +....++ ..+|+|||+||.... .+.++..+++|+.|+..+++.+... .
T Consensus 64 ~~~Dl~d~-------~~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 136 (258)
T PRK09134 64 LQADLADE-------AEVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPAD 136 (258)
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 99999953 3222332 358999999986432 1346677899999999999988753 1
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
.-.++|++||....... +....|+
T Consensus 137 ~~~~iv~~~s~~~~~~~--------------------------------------------------------p~~~~Y~ 160 (258)
T PRK09134 137 ARGLVVNMIDQRVWNLN--------------------------------------------------------PDFLSYT 160 (258)
T ss_pred CCceEEEECchhhcCCC--------------------------------------------------------CCchHHH
Confidence 22467777664322110 1124699
Q ss_pred HHHHHHHHHHHHh----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHH
Q 008324 233 FTKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (570)
Q Consensus 233 ~sK~~aE~lv~~~----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
.||+..|.+.+.+ ..++.++.++|+.+.+..... . ..+.....+.. .+ ....++|+
T Consensus 161 ~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~----------~-~~~~~~~~~~~---~~------~~~~~~d~ 220 (258)
T PRK09134 161 LSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQS----------P-EDFARQHAATP---LG------RGSTPEEI 220 (258)
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccC----------h-HHHHHHHhcCC---CC------CCcCHHHH
Confidence 9999999988775 235899999999886542210 0 11111111110 11 23679999
Q ss_pred HHHHHHHHHHhhCCCCCCceEEecCCCCCcccH
Q 008324 309 VNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTL 341 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~~~~pit~ 341 (570)
|++++.++... ...+++|++.++ ..++|
T Consensus 221 a~~~~~~~~~~---~~~g~~~~i~gg--~~~~~ 248 (258)
T PRK09134 221 AAAVRYLLDAP---SVTGQMIAVDGG--QHLAW 248 (258)
T ss_pred HHHHHHHhcCC---CcCCCEEEECCC--eeccc
Confidence 99999988622 123678888887 34444
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.6e-14 Score=139.03 Aligned_cols=196 Identities=15% Similarity=0.214 Sum_probs=135.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++++||||||+||++++++|++.| .+|.++.|+.... +.+.++ +.. ...++.+
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G---~~Vi~~~r~~~~~---~~~~~~---------~~~---------~~~~~~~ 60 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKEG---VNVGLLARTEENL---KAVAEE---------VEA---------YGVKVVI 60 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHH---------HHH---------hCCeEEE
Confidence 468999999999999999999999988 5788888875321 111111 111 0247888
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|++++ +..+.++ .++|+|||+|+.... .+.++..+++|+.|+.++++.+... .
T Consensus 61 ~~~D~~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 133 (239)
T PRK07666 61 ATADVSDY-------EEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIER 133 (239)
T ss_pred EECCCCCH-------HHHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 99999953 3333333 369999999987532 1335667899999999998887642 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+.+++|++||....... .....|+
T Consensus 134 ~~~~iv~~ss~~~~~~~--------------------------------------------------------~~~~~Y~ 157 (239)
T PRK07666 134 QSGDIINISSTAGQKGA--------------------------------------------------------AVTSAYS 157 (239)
T ss_pred CCcEEEEEcchhhccCC--------------------------------------------------------CCCcchH
Confidence 45789999987543221 1235699
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.+|+..+.+++.+ ..+++++++||+.|.++...... ... +++ ..+++.++
T Consensus 158 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~---------------~~~-------~~~---~~~~~~~~ 212 (239)
T PRK07666 158 ASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLG---------------LTD-------GNP---DKVMQPED 212 (239)
T ss_pred HHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcc---------------ccc-------cCC---CCCCCHHH
Confidence 9999888887654 35899999999999876432110 000 011 23578899
Q ss_pred HHHHHHHHHH
Q 008324 308 VVNAMIVAMV 317 (570)
Q Consensus 308 va~aii~a~~ 317 (570)
+|++++.++.
T Consensus 213 ~a~~~~~~l~ 222 (239)
T PRK07666 213 LAEFIVAQLK 222 (239)
T ss_pred HHHHHHHHHh
Confidence 9999999885
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.7e-14 Score=142.65 Aligned_cols=217 Identities=15% Similarity=0.130 Sum_probs=143.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||.++++.|++.| .+|+++.|+.... ....++ ...++.+
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G---~~Vi~~~r~~~~~----~~~~~~--------------------~~~~~~~ 65 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKG---ARVALLDRSEDVA----EVAAQL--------------------LGGNAKG 65 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHH----HHHHHh--------------------hCCceEE
Confidence 568999999999999999999999988 5788888865321 111000 0245678
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f~-------~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|++++ +..+.++ .++|+|||+||..... +.++..+++|+.|+.++++.+... .
T Consensus 66 ~~~Dl~~~-------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 138 (255)
T PRK06841 66 LVCDVSDS-------QSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAA 138 (255)
T ss_pred EEecCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhc
Confidence 99999953 3233332 3689999999975421 345567899999999999988652 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... +....|+
T Consensus 139 ~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~ 162 (255)
T PRK06841 139 GGGKIVNLASQAGVVAL--------------------------------------------------------ERHVAYC 162 (255)
T ss_pred CCceEEEEcchhhccCC--------------------------------------------------------CCCchHH
Confidence 45689999987432111 1124699
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.. ..++.+..++|+.|..+.... .|. +. .......+. ....+.+.++
T Consensus 163 ~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~--~~~----~~--~~~~~~~~~---------~~~~~~~~~~ 225 (255)
T PRK06841 163 ASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKK--AWA----GE--KGERAKKLI---------PAGRFAYPEE 225 (255)
T ss_pred HHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCccccc--ccc----hh--HHHHHHhcC---------CCCCCcCHHH
Confidence 9999988887654 347999999999987764311 111 00 011111111 1224678999
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++++.++...... -.++++++.++
T Consensus 226 va~~~~~l~~~~~~~-~~G~~i~~dgg 251 (255)
T PRK06841 226 IAAAALFLASDAAAM-ITGENLVIDGG 251 (255)
T ss_pred HHHHHHHHcCccccC-ccCCEEEECCC
Confidence 999999887532222 23677877765
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.60 E-value=6.2e-14 Score=139.68 Aligned_cols=219 Identities=16% Similarity=0.129 Sum_probs=144.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+++||||+|+||+.++++|++.| .+|+++.|+. +. . ...++.+
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~G---~~v~~~~~~~--------~~--------------~--------~~~~~~~ 52 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEAG---AKVIGFDQAF--------LT--------------Q--------EDYPFAT 52 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEecch--------hh--------------h--------cCCceEE
Confidence 678999999999999999999999998 5778888754 00 0 0246788
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|+++ .+..+.++ ..+|+|||+|+.... .+.++..+++|+.++..+++.+... +
T Consensus 53 ~~~D~~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 125 (252)
T PRK08220 53 FVLDVSD-------AAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQ 125 (252)
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC
Confidence 9999995 33333443 348999999997542 1346677999999999999988542 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 126 ~~g~iv~~ss~~~~~~~--------------------------------------------------------~~~~~Y~ 149 (252)
T PRK08220 126 RSGAIVTVGSNAAHVPR--------------------------------------------------------IGMAAYG 149 (252)
T ss_pred CCCEEEEECCchhccCC--------------------------------------------------------CCCchhH
Confidence 34579999986432211 1235799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCcccc-CccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVE-DLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~-~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
.||+..|.+++.+ ..++++++++|+.|.++....+..... ......+.......+ .....++.++
T Consensus 150 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 220 (252)
T PRK08220 150 ASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLG---------IPLGKIARPQ 220 (252)
T ss_pred HHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhc---------CCCcccCCHH
Confidence 9999999988765 257999999999998875422100000 000000001111111 1224578899
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++..... ...+++..+.++
T Consensus 221 dva~~~~~l~~~~~~-~~~g~~i~~~gg 247 (252)
T PRK08220 221 EIANAVLFLASDLAS-HITLQDIVVDGG 247 (252)
T ss_pred HHHHHHHHHhcchhc-CccCcEEEECCC
Confidence 999999988753222 222555655554
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.1e-14 Score=141.11 Aligned_cols=216 Identities=15% Similarity=0.195 Sum_probs=135.7
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++++||||||+||+++++.|++.| ..|.+..|+... .+.+. .. ...++.+
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~g---~~v~~~~~~~~~---~~~~~-------------~~--------~~~~~~~ 56 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQG---AIVGLHGTRVEK---LEALA-------------AE--------LGERVKI 56 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEcCCHHH---HHHHH-------------HH--------hCCceEE
Confidence 368999999999999999999999988 456666564321 11111 01 0246788
Q ss_pred EeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|+++ .+..+.+ +.++|+|||+|+.... .+.++..+++|+.|+.++++.+.+. .
T Consensus 57 ~~~D~~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 129 (245)
T PRK12936 57 FPANLSD-------RDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRR 129 (245)
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHh
Confidence 8999995 3333333 2468999999997532 2446777899999999998876532 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..+||++||........ ....|+
T Consensus 130 ~~~~iv~~sS~~~~~~~~--------------------------------------------------------~~~~Y~ 153 (245)
T PRK12936 130 RYGRIINITSVVGVTGNP--------------------------------------------------------GQANYC 153 (245)
T ss_pred CCCEEEEECCHHhCcCCC--------------------------------------------------------CCcchH
Confidence 557899999864332111 123588
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.+|+..+.+++.. ..++++++++|+.+.++...... +. ......+.. ....+...++
T Consensus 154 ~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~---~~-------~~~~~~~~~--------~~~~~~~~~~ 215 (245)
T PRK12936 154 ASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLN---DK-------QKEAIMGAI--------PMKRMGTGAE 215 (245)
T ss_pred HHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccC---hH-------HHHHHhcCC--------CCCCCcCHHH
Confidence 8888666655433 34799999999987654321111 00 000001110 1112456899
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++++..++... ...-.++++++.++
T Consensus 216 ia~~~~~l~~~~-~~~~~G~~~~~~~g 241 (245)
T PRK12936 216 VASAVAYLASSE-AAYVTGQTIHVNGG 241 (245)
T ss_pred HHHHHHHHcCcc-ccCcCCCEEEECCC
Confidence 999998766422 22224788998876
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.2e-13 Score=138.34 Aligned_cols=223 Identities=17% Similarity=0.106 Sum_probs=141.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||.+++++|++.| .+|+++.|+.... +.+.++ ++. ...++.+
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~~---------i~~---------~~~~~~~ 65 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAG---ARVVLSARKAEEL---EEAAAH---------LEA---------LGIDALW 65 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcC---CEEEEEeCCHHHH---HHHHHH---------HHh---------cCCeEEE
Confidence 478999999999999999999999988 5788888864221 111111 111 0246778
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc----
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---- 151 (570)
+.+|++++ +..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 66 ~~~Dl~d~-------~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~ 138 (259)
T PRK08213 66 IAADVADE-------ADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIP 138 (259)
T ss_pred EEccCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHh
Confidence 99999953 3232222 358999999986421 1345667889999999999987653
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
++..+||++||........+. + .....|
T Consensus 139 ~~~~~~v~~sS~~~~~~~~~~-----~-----------------------------------------------~~~~~Y 166 (259)
T PRK08213 139 RGYGRIINVASVAGLGGNPPE-----V-----------------------------------------------MDTIAY 166 (259)
T ss_pred cCCeEEEEECChhhccCCCcc-----c-----------------------------------------------cCcchH
Confidence 255789999997544321100 0 113579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.+|+..|.+++.+ ..++++.+++|+.+-++.... .. .........+... .-+...+
T Consensus 167 ~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~---~~------~~~~~~~~~~~~~---------~~~~~~~ 228 (259)
T PRK08213 167 NTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRG---TL------ERLGEDLLAHTPL---------GRLGDDE 228 (259)
T ss_pred HHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhh---hh------HHHHHHHHhcCCC---------CCCcCHH
Confidence 99999999998765 347999999998886643211 11 1111111111111 1123468
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++++..++... ...-.+.++++.++
T Consensus 229 ~va~~~~~l~~~~-~~~~~G~~~~~~~~ 255 (259)
T PRK08213 229 DLKGAALLLASDA-SKHITGQILAVDGG 255 (259)
T ss_pred HHHHHHHHHhCcc-ccCccCCEEEECCC
Confidence 8888877776422 22223677777665
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.4e-14 Score=160.66 Aligned_cols=227 Identities=18% Similarity=0.208 Sum_probs=150.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+.||+|+||||+|+||+++++.|++.| .+|+++.|+.... +.+.++ ... ..++..
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~G---a~Vvl~~r~~~~~---~~~~~~-------------l~~------~~~v~~ 474 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAEG---ACVVLADLDEEAA---EAAAAE-------------LGG------PDRALG 474 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCc---CEEEEEeCCHHHH---HHHHHH-------------Hhc------cCcEEE
Confidence 578999999999999999999999988 5788888875321 111101 000 136788
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .
T Consensus 475 v~~Dvtd-------~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~ 547 (681)
T PRK08324 475 VACDVTD-------EAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQ 547 (681)
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 9999995 33333333 368999999996432 2446677899999999998877542 1
Q ss_pred Cc-eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 153 KL-KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 153 ~l-~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+. .+||++||....... +....|
T Consensus 548 ~~~g~iV~vsS~~~~~~~--------------------------------------------------------~~~~~Y 571 (681)
T PRK08324 548 GLGGSIVFIASKNAVNPG--------------------------------------------------------PNFGAY 571 (681)
T ss_pred CCCcEEEEECCccccCCC--------------------------------------------------------CCcHHH
Confidence 33 689999986543211 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCcee-cCCCCCCCccccCccchHHHHHHHhcCCce----eeecCCCeeee
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVS-GTYKEPFPGWVEDLKTINTLFVASAQGNLR----CLVGETKVIMD 301 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~-g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~----~~~~~~~~~~d 301 (570)
+.||+..|.+++.+ ..++++.+++|+.|+ ++..- .+.|... .....|... ..+.+.....+
T Consensus 572 ~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~-~~~~~~~--------~~~~~g~~~~~~~~~~~~~~~l~~ 642 (681)
T PRK08324 572 GAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIW-TGEWIEA--------RAAAYGLSEEELEEFYRARNLLKR 642 (681)
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccc-cchhhhh--------hhhhccCChHHHHHHHHhcCCcCC
Confidence 99999999998865 346999999999998 44210 0122110 011111111 12333445567
Q ss_pred eeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 302 ~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++++|+|++++.++.... ....+.+|++.+|
T Consensus 643 ~v~~~DvA~a~~~l~s~~~-~~~tG~~i~vdgG 674 (681)
T PRK08324 643 EVTPEDVAEAVVFLASGLL-SKTTGAIITVDGG 674 (681)
T ss_pred ccCHHHHHHHHHHHhCccc-cCCcCCEEEECCC
Confidence 8999999999998774221 2223789999887
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.1e-13 Score=138.67 Aligned_cols=220 Identities=16% Similarity=0.182 Sum_probs=142.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||+.+++.|++.| .+|+++.|+.+. +.+.+.+ . + ...++.+
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G---~~v~~~~~~~~~----~~~~~~~---------~-~--------~~~~~~~ 67 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAG---ADIIITTHGTNW----DETRRLI---------E-K--------EGRKVTF 67 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCcHH----HHHHHHH---------H-h--------cCCceEE
Confidence 578999999999999999999999998 677888886221 2222111 0 0 0246889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--c
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~ 152 (570)
+.+|+++ .+..+.+++ .+|++||+|+.... .+.++..+++|+.|+..+++.+.. + +
T Consensus 68 ~~~D~~~-------~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 140 (258)
T PRK06935 68 VQVDLTK-------PESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQ 140 (258)
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhc
Confidence 9999995 333333333 68999999997532 234667789999998888877654 2 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+... .....|+
T Consensus 141 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 164 (258)
T PRK06935 141 GSGKIINIASMLSFQGG--------------------------------------------------------KFVPAYT 164 (258)
T ss_pred CCeEEEEECCHHhccCC--------------------------------------------------------CCchhhH
Confidence 45689999997544221 1224799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.+|+..|.+++.+ ..++++++++|+.|.++...+.+.. ... ....... .+ ...+...+|
T Consensus 165 asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~----~~~---~~~~~~~----~~-----~~~~~~~~d 228 (258)
T PRK06935 165 ASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRAD----KNR---NDEILKR----IP-----AGRWGEPDD 228 (258)
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccC----hHH---HHHHHhc----CC-----CCCCCCHHH
Confidence 9999999988765 3479999999999887654322110 000 0011110 00 122456689
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++++..++..... .-.+.++.+.++
T Consensus 229 va~~~~~l~s~~~~-~~~G~~i~~dgg 254 (258)
T PRK06935 229 LMGAAVFLASRASD-YVNGHILAVDGG 254 (258)
T ss_pred HHHHHHHHcChhhc-CCCCCEEEECCC
Confidence 99999877753222 223667776665
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.7e-13 Score=135.22 Aligned_cols=194 Identities=14% Similarity=0.133 Sum_probs=131.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+.+++|+||||||++|+++++.|++.| .+|+++.|+... .+++.+++ .. ..++..
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g---~~V~~~~r~~~~---~~~~~~~l---------~~----------~~~~~~ 58 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEG---YKVAITARDQKE---LEEAAAEL---------NN----------KGNVLG 58 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCC---CEEEEeeCCHHH---HHHHHHHH---------hc----------cCcEEE
Confidence 457999999999999999999999987 568889886422 11221111 10 146788
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc--cC
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~--~~ 153 (570)
+.+|++++ +....++ ..+|+|||+|+.... .+.++..+++|+.|+.++++.+.+. .+
T Consensus 59 ~~~D~~~~-------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 131 (237)
T PRK07326 59 LAADVRDE-------ADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRG 131 (237)
T ss_pred EEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHC
Confidence 99999953 3332333 368999999987542 1335567899999999998887642 24
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||....... .....|+.
T Consensus 132 ~~~iv~~ss~~~~~~~--------------------------------------------------------~~~~~y~~ 155 (237)
T PRK07326 132 GGYIINISSLAGTNFF--------------------------------------------------------AGGAAYNA 155 (237)
T ss_pred CeEEEEECChhhccCC--------------------------------------------------------CCCchHHH
Confidence 5679999987533211 11246999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHH
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
+|+..+.+.+.. ..+++++++||+.+.++.....+. . .....+..+|+
T Consensus 156 sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~-------------------------~--~~~~~~~~~d~ 208 (237)
T PRK07326 156 SKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPS-------------------------E--KDAWKIQPEDI 208 (237)
T ss_pred HHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccc-------------------------h--hhhccCCHHHH
Confidence 999888777654 358999999999886643211000 0 00113678999
Q ss_pred HHHHHHHHHH
Q 008324 309 VNAMIVAMVA 318 (570)
Q Consensus 309 a~aii~a~~~ 318 (570)
+..++.++..
T Consensus 209 a~~~~~~l~~ 218 (237)
T PRK07326 209 AQLVLDLLKM 218 (237)
T ss_pred HHHHHHHHhC
Confidence 9999988853
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.1e-13 Score=135.17 Aligned_cols=221 Identities=14% Similarity=0.137 Sum_probs=140.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.++++|+||||+|+||++++++|++.| .+|+++.|+... ..+.+. +.+.. ...++.+
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g---~~v~~~~~~~~~--~~~~~~---------~~~~~---------~~~~~~~ 59 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADG---FAVAVNYAGSAA--AADELV---------AEIEA---------AGGRAIA 59 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEecCCCHH--HHHHHH---------HHHHh---------cCCeEEE
Confidence 468999999999999999999999998 466666665421 111111 11111 1256889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-ccCc
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-CVKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~~~l 154 (570)
+.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+.+ +..-
T Consensus 60 ~~~Dl~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 132 (245)
T PRK12937 60 VQADVADA-------AAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG 132 (245)
T ss_pred EECCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC
Confidence 99999953 3333333 368999999997532 234566789999999999988765 3233
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||....... +..+.|+.+
T Consensus 133 ~~iv~~ss~~~~~~~--------------------------------------------------------~~~~~Y~~s 156 (245)
T PRK12937 133 GRIINLSTSVIALPL--------------------------------------------------------PGYGPYAAS 156 (245)
T ss_pred cEEEEEeeccccCCC--------------------------------------------------------CCCchhHHH
Confidence 589999886432211 123579999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHH
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..|.+++.. ..++++++++|+.+-++... +. .. ...+..+.... ...-..+++|++
T Consensus 157 K~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~------~~-~~-~~~~~~~~~~~---------~~~~~~~~~d~a 219 (245)
T PRK12937 157 KAAVEGLVHVLANELRGRGITVNAVAPGPVATELFF------NG-KS-AEQIDQLAGLA---------PLERLGTPEEIA 219 (245)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhc------cc-CC-HHHHHHHHhcC---------CCCCCCCHHHHH
Confidence 99999988764 34789999999988765320 00 00 01111111111 011234679999
Q ss_pred HHHHHHHHHhhCCCCCCceEEecCC
Q 008324 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++.++... ...-.+.++++.++
T Consensus 220 ~~~~~l~~~~-~~~~~g~~~~~~~g 243 (245)
T PRK12937 220 AAVAFLAGPD-GAWVNGQVLRVNGG 243 (245)
T ss_pred HHHHHHcCcc-ccCccccEEEeCCC
Confidence 9988877422 22223678888654
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.4e-13 Score=138.06 Aligned_cols=217 Identities=13% Similarity=0.152 Sum_probs=141.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||++|||||+|+||++++++|++.| .+|+++.|+... ..++..
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G---~~Vi~~~r~~~~--------------------------------~~~~~~ 48 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEG---SNVINFDIKEPS--------------------------------YNDVDY 48 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEeCCccc--------------------------------cCceEE
Confidence 578999999999999999999999998 678888886432 135778
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|++++ +..+.++ ..+|+|||+||.... .+.++..+++|+.|+..+++.+.+. .
T Consensus 49 ~~~D~~~~-------~~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 121 (258)
T PRK06398 49 FKVDVSNK-------EQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQ 121 (258)
T ss_pred EEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 99999954 2222322 368999999997532 2346677899999999998877542 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 122 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 145 (258)
T PRK06398 122 DKGVIINIASVQSFAVT--------------------------------------------------------RNAAAYV 145 (258)
T ss_pred CCeEEEEeCcchhccCC--------------------------------------------------------CCCchhh
Confidence 45789999996543211 1235799
Q ss_pred HHHHHHHHHHHHh----ccCCcEEEEecCceecCCCCCCCccccCc--cchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 233 FTKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDL--KTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 233 ~sK~~aE~lv~~~----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~--~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
.||+..|.+.+.. ..++.+..++|+.|-++.......+..+. ......+..... ......+...+
T Consensus 146 ~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~p~ 216 (258)
T PRK06398 146 TSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGE---------MHPMKRVGKPE 216 (258)
T ss_pred hhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhh---------cCCcCCCcCHH
Confidence 9999999998765 33489999999988765432211110000 000000111110 00112345689
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++|++++.++..... .-.++++.+.++
T Consensus 217 eva~~~~~l~s~~~~-~~~G~~i~~dgg 243 (258)
T PRK06398 217 EVAYVVAFLASDLAS-FITGECVTVDGG 243 (258)
T ss_pred HHHHHHHHHcCcccC-CCCCcEEEECCc
Confidence 999999887753221 123667776665
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.7e-13 Score=136.00 Aligned_cols=218 Identities=16% Similarity=0.077 Sum_probs=134.3
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEE-EcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF-VRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~l-vR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
++|+||||+|+||++++++|++.| .+|.++ .|+... .+.+..+ +.. ...++..+.
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g---~~v~~~~~~~~~~---~~~~~~~---------~~~---------~~~~~~~~~ 57 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEG---YTVAVNYQQNLHA---AQEVVNL---------ITQ---------AGGKAFVLQ 57 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCChHH---HHHHHHH---------HHh---------CCCeEEEEE
Confidence 589999999999999999999988 455554 343211 1111111 111 024578899
Q ss_pred ccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHHc-----
Q 008324 92 GDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC----- 151 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f--------~~~~~~~~~~Nv~gt~~ll~la~~~----- 151 (570)
+|++++ +..+.++ ..+|+|||+|+.... .+.++..+++|+.|+..+++.+...
T Consensus 58 ~D~~d~-------~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 130 (247)
T PRK09730 58 ADISDE-------NQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKH 130 (247)
T ss_pred ccCCCH-------HHHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC
Confidence 999953 3333333 347899999996421 1235577899999998887766442
Q ss_pred -cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+-.+||++||........ .....
T Consensus 131 ~~~~g~~v~~sS~~~~~~~~-------------------------------------------------------~~~~~ 155 (247)
T PRK09730 131 GGSGGAIVNVSSAASRLGAP-------------------------------------------------------GEYVD 155 (247)
T ss_pred CCCCcEEEEECchhhccCCC-------------------------------------------------------Ccccc
Confidence 0124699999975432110 11245
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.+|+..|.+++.. ..+++++++||+.++++..... +..........+.. . ....+.
T Consensus 156 Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~--------~~~~~~~~~~~~~~----~-----~~~~~~ 218 (247)
T PRK09730 156 YAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASG--------GEPGRVDRVKSNIP----M-----QRGGQP 218 (247)
T ss_pred hHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccC--------CCHHHHHHHHhcCC----C-----CCCcCH
Confidence 999999999887754 3589999999999999754210 01111111111111 0 011368
Q ss_pred HHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++++.++..... ...+.+|++.++
T Consensus 219 ~dva~~~~~~~~~~~~-~~~g~~~~~~g~ 246 (247)
T PRK09730 219 EEVAQAIVWLLSDKAS-YVTGSFIDLAGG 246 (247)
T ss_pred HHHHHHHHhhcChhhc-CccCcEEecCCC
Confidence 9999999987753322 123567776654
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.4e-13 Score=136.73 Aligned_cols=221 Identities=13% Similarity=0.082 Sum_probs=142.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++|++++||||||+||.+++++|++.| .+|+++.|+... .+.+.++ ++. ...++.+
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G---~~Vi~~~r~~~~---~~~~~~~---------l~~---------~~~~~~~ 63 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAG---ADVLIAARTESQ---LDEVAEQ---------IRA---------AGRRAHV 63 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHh---------cCCcEEE
Confidence 578999999999999999999999988 678888886432 1121111 111 0246788
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc----
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---- 151 (570)
+.+|+++ ++....++ .++|+|||+|+.... .+.++..+++|+.|+.++++++...
T Consensus 64 ~~~D~~~-------~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 136 (263)
T PRK07814 64 VAADLAH-------PEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEH 136 (263)
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhh
Confidence 9999995 33333332 368999999986432 1346677899999999999998641
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||....... ...+.|
T Consensus 137 ~~~g~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y 160 (263)
T PRK07814 137 SGGGSVINISSTMGRLAG--------------------------------------------------------RGFAAY 160 (263)
T ss_pred cCCeEEEEEccccccCCC--------------------------------------------------------CCCchh
Confidence 245689999986432110 123579
Q ss_pred HHHHHHHHHHHHHh----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 232 VFTKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 232 ~~sK~~aE~lv~~~----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
+.||+..|.+++.. ..++.++.++|+.|.++..+. +.++ ..+ .....+.. ....+...+|
T Consensus 161 ~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~---~~~~----~~~-~~~~~~~~--------~~~~~~~~~~ 224 (263)
T PRK07814 161 GTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEV---VAAN----DEL-RAPMEKAT--------PLRRLGDPED 224 (263)
T ss_pred HHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhh---ccCC----HHH-HHHHHhcC--------CCCCCcCHHH
Confidence 99999999988765 346889999999886643211 0000 011 11111111 1122457899
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++++.++.... ....+.++.+.++
T Consensus 225 va~~~~~l~~~~~-~~~~g~~~~~~~~ 250 (263)
T PRK07814 225 IAAAAVYLASPAG-SYLTGKTLEVDGG 250 (263)
T ss_pred HHHHHHHHcCccc-cCcCCCEEEECCC
Confidence 9999998875321 2223566666554
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.7e-13 Score=133.52 Aligned_cols=209 Identities=11% Similarity=0.062 Sum_probs=136.7
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+|+|+||||||+||++++++|++.| .+|+++.|+.... ....++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G---~~v~~~~r~~~~~--------------------------------~~~~~~ 46 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLG---HQVIGIARSAIDD--------------------------------FPGELF 46 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCC---CEEEEEeCCcccc--------------------------------cCceEE
Confidence 57899999999999999999999998 6788888875421 011367
Q ss_pred eccCCCCCCCCCchhhHHHHhC------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--cCc
Q 008324 91 PGDISSEDLGLKDSNLKEELWN------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--VKL 154 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~l 154 (570)
.+|++++ +..+.+++ ++|+|||+||.... .+.+...+++|+.|+.++.+.+.. + .+.
T Consensus 47 ~~D~~~~-------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 119 (234)
T PRK07577 47 ACDLADI-------EQTAATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQ 119 (234)
T ss_pred EeeCCCH-------HHHHHHHHHHHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 8999953 32333333 58999999997543 134556789999999888776643 1 256
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||...++.. ....|..|
T Consensus 120 ~~iv~~sS~~~~~~~---------------------------------------------------------~~~~Y~~s 142 (234)
T PRK07577 120 GRIVNICSRAIFGAL---------------------------------------------------------DRTSYSAA 142 (234)
T ss_pred cEEEEEccccccCCC---------------------------------------------------------CchHHHHH
Confidence 789999998654321 12569999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHH
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..|.+++.. ..+++++++||+.+.++... +.. .............. ........+++|
T Consensus 143 K~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~----~~~--~~~~~~~~~~~~~~---------~~~~~~~~~~~a 207 (234)
T PRK07577 143 KSALVGCTRTWALELAEYGITVNAVAPGPIETELFR----QTR--PVGSEEEKRVLASI---------PMRRLGTPEEVA 207 (234)
T ss_pred HHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccc----ccc--ccchhHHHHHhhcC---------CCCCCcCHHHHH
Confidence 99999888754 34899999999998765321 000 00000011111110 011234678999
Q ss_pred HHHHHHHHHhhCCCCCCceEEecCC
Q 008324 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.+++.++..... ...+.++.+.++
T Consensus 208 ~~~~~l~~~~~~-~~~g~~~~~~g~ 231 (234)
T PRK07577 208 AAIAFLLSDDAG-FITGQVLGVDGG 231 (234)
T ss_pred HHHHHHhCcccC-CccceEEEecCC
Confidence 999988753322 123677877655
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.5e-13 Score=137.58 Aligned_cols=221 Identities=16% Similarity=0.169 Sum_probs=138.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||+++++.|++.| .+|+++.|.... ..+.+. ..++.+
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~~~G---~~v~~~~~~~~~--~~~~l~------------------------~~~~~~ 55 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFLREG---AKVAVLYNSAEN--EAKELR------------------------EKGVFT 55 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCcHH--HHHHHH------------------------hCCCeE
Confidence 578999999999999999999999998 566666654321 111111 124678
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~ 152 (570)
+.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+..+.+.+.+ + .
T Consensus 56 ~~~Dl~~~-------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~ 128 (255)
T PRK06463 56 IKCDVGNR-------DQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS 128 (255)
T ss_pred EEecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc
Confidence 99999953 3333332 368999999987531 234567789999997666554432 2 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....+... .....|+
T Consensus 129 ~~g~iv~isS~~~~~~~~-------------------------------------------------------~~~~~Y~ 153 (255)
T PRK06463 129 KNGAIVNIASNAGIGTAA-------------------------------------------------------EGTTFYA 153 (255)
T ss_pred CCcEEEEEcCHHhCCCCC-------------------------------------------------------CCccHhH
Confidence 456899999976543110 1124699
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+++.. ..++++.+++|+.|-.+....... . ............. .....+...++
T Consensus 154 asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~--~--~~~~~~~~~~~~~---------~~~~~~~~~~~ 220 (255)
T PRK06463 154 ITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKS--Q--EEAEKLRELFRNK---------TVLKTTGKPED 220 (255)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccC--c--cchHHHHHHHHhC---------CCcCCCcCHHH
Confidence 9999999888765 347999999999886653311000 0 0000011111111 11223467899
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~ 335 (570)
++++++.++.... ..-.+.++.+.++.
T Consensus 221 va~~~~~l~s~~~-~~~~G~~~~~dgg~ 247 (255)
T PRK06463 221 IANIVLFLASDDA-RYITGQVIVADGGR 247 (255)
T ss_pred HHHHHHHHcChhh-cCCCCCEEEECCCe
Confidence 9999998875332 22236788887763
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.2e-13 Score=136.90 Aligned_cols=196 Identities=13% Similarity=0.100 Sum_probs=133.5
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+++||||||+||+.++++|++.| .+|+++.|+.... +.+.++ +++ ...++.++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~~---------~~~---------~~~~~~~~ 60 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAG---WDLALVARSQDAL---EALAAE---------LRS---------TGVKAAAY 60 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHH---------HHh---------CCCcEEEE
Confidence 46899999999999999999999988 5789999875321 112111 111 02468889
Q ss_pred eccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHHHc---cC
Q 008324 91 PGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAKKC---VK 153 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f~-------~~~~~~~~~Nv~gt~~ll~la~~~---~~ 153 (570)
.+|++++ +....++ ..+|+|||+||..... +.++..+++|+.|+.++++.+... .+
T Consensus 61 ~~D~~~~-------~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 133 (241)
T PRK07454 61 SIDLSNP-------EAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG 133 (241)
T ss_pred EccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC
Confidence 9999953 3222332 3589999999975321 345667899999999988776431 24
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|.+||...++.. .....|+.
T Consensus 134 ~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~ 157 (241)
T PRK07454 134 GGLIINVSSIAARNAF--------------------------------------------------------PQWGAYCV 157 (241)
T ss_pred CcEEEEEccHHhCcCC--------------------------------------------------------CCccHHHH
Confidence 5789999998654321 12356999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHH
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..+.+++.. ..+++++++||+.+-++..+. . . . .. .. .....++.+++
T Consensus 158 sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~------~-~-~--------~~---~~-----~~~~~~~~~~v 213 (241)
T PRK07454 158 SKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDT------E-T-V--------QA---DF-----DRSAMLSPEQV 213 (241)
T ss_pred HHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccc------c-c-c--------cc---cc-----ccccCCCHHHH
Confidence 999999887653 348999999999987653211 0 0 0 00 00 01134799999
Q ss_pred HHHHHHHHH
Q 008324 309 VNAMIVAMV 317 (570)
Q Consensus 309 a~aii~a~~ 317 (570)
|++++.++.
T Consensus 214 a~~~~~l~~ 222 (241)
T PRK07454 214 AQTILHLAQ 222 (241)
T ss_pred HHHHHHHHc
Confidence 999999875
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.7e-13 Score=136.83 Aligned_cols=227 Identities=12% Similarity=0.126 Sum_probs=140.4
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+++||+++||||+|+||.+++++|++.| .+|.+..+..... .+... +.+... ..++.
T Consensus 1 ~~~~k~~lItGas~gIG~~ia~~l~~~G---~~v~~~~~~~~~~--~~~~~---------~~~~~~---------~~~~~ 57 (252)
T PRK12747 1 MLKGKVALVTGASRGIGRAIAKRLANDG---ALVAIHYGNRKEE--AEETV---------YEIQSN---------GGSAF 57 (252)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCC---CeEEEEcCCCHHH--HHHHH---------HHHHhc---------CCceE
Confidence 3578999999999999999999999998 5566654332111 11111 111111 24567
Q ss_pred EEeccCCCCCCCCCchhhHHHHh---------CCccEEEEcCccCC---cc----ccHHHHHHHhHHHHHHHHHHHHH-c
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW---------NELDIMVNSAAITK---FD----ERYDVAFGINTLGVIHLVNFAKK-C 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~---------~~vdiViH~AA~v~---f~----~~~~~~~~~Nv~gt~~ll~la~~-~ 151 (570)
.+..|+++++- .....+.+. ..+|+|||+||... +. +.++..+++|+.|+..+++.+.. +
T Consensus 58 ~~~~D~~~~~~---~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~ 134 (252)
T PRK12747 58 SIGANLESLHG---VEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRL 134 (252)
T ss_pred EEecccCCHHH---HHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 88899986421 011111111 26999999999642 21 23577789999999999987764 3
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.++|++||....... +....|
T Consensus 135 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 158 (252)
T PRK12747 135 RDNSRIINISSAATRISL--------------------------------------------------------PDFIAY 158 (252)
T ss_pred hcCCeEEEECCcccccCC--------------------------------------------------------CCchhH
Confidence 333589999998643221 112569
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+++.. ..++++..+.|+.|.++..... ... .......... .....+...+
T Consensus 159 ~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~---~~~-----~~~~~~~~~~--------~~~~~~~~~~ 222 (252)
T PRK12747 159 SMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAEL---LSD-----PMMKQYATTI--------SAFNRLGEVE 222 (252)
T ss_pred HHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhc---ccC-----HHHHHHHHhc--------CcccCCCCHH
Confidence 99999999988764 4579999999999987643211 110 0111111100 0112356889
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+++++..++.... ..-.+.++.+.++
T Consensus 223 dva~~~~~l~s~~~-~~~~G~~i~vdgg 249 (252)
T PRK12747 223 DIADTAAFLASPDS-RWVTGQLIDVSGG 249 (252)
T ss_pred HHHHHHHHHcCccc-cCcCCcEEEecCC
Confidence 99999988764222 1123567777654
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.9e-13 Score=133.45 Aligned_cols=215 Identities=17% Similarity=0.189 Sum_probs=138.5
Q ss_pred EEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccC
Q 008324 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (570)
Q Consensus 15 VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl 94 (570)
|+||||+|+||+.+++.|++.| .+|+++.|+.... .+.+.++ +.. . ..++..+.+|+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G---~~v~~~~r~~~~~--~~~~~~~---------~~~-~--------~~~~~~~~~D~ 57 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEG---AKVIITYRSSEEG--AEEVVEE---------LKA-Y--------GVKALGVVCDV 57 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCchhH--HHHHHHH---------HHh-c--------CCceEEEEecC
Confidence 5899999999999999999988 5788888865211 1111111 111 0 13578899999
Q ss_pred CCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---cCceEE
Q 008324 95 SSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (570)
Q Consensus 95 ~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~l~~~ 157 (570)
+++ +..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++++.+... ++..+|
T Consensus 58 ~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~ 130 (239)
T TIGR01830 58 SDR-------EDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRI 130 (239)
T ss_pred CCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEE
Confidence 953 3333333 347999999997632 1345667899999999999988753 246689
Q ss_pred EEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHH
Q 008324 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (570)
Q Consensus 158 V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~ 237 (570)
|++||....... +....|+.+|+.
T Consensus 131 v~~sS~~~~~g~--------------------------------------------------------~~~~~y~~~k~a 154 (239)
T TIGR01830 131 INISSVVGLMGN--------------------------------------------------------AGQANYAASKAG 154 (239)
T ss_pred EEECCccccCCC--------------------------------------------------------CCCchhHHHHHH
Confidence 999996433211 112569999998
Q ss_pred HHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHH
Q 008324 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (570)
Q Consensus 238 aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ai 312 (570)
.+.+++.. ..+++++++||+.+.++...+.+ ............ ..-+.+++++++++
T Consensus 155 ~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~---------~~~~~~~~~~~~---------~~~~~~~~~~a~~~ 216 (239)
T TIGR01830 155 VIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLS---------EKVKKKILSQIP---------LGRFGTPEEVANAV 216 (239)
T ss_pred HHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcC---------hHHHHHHHhcCC---------cCCCcCHHHHHHHH
Confidence 88776654 35899999999987664322110 111111111111 11245789999999
Q ss_pred HHHHHHhhCCCCCCceEEecCC
Q 008324 313 IVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 313 i~a~~~~~~~~~~~~iyni~s~ 334 (570)
+.++... .....+++||+.++
T Consensus 217 ~~~~~~~-~~~~~g~~~~~~~g 237 (239)
T TIGR01830 217 AFLASDE-ASYITGQVIHVDGG 237 (239)
T ss_pred HHHhCcc-cCCcCCCEEEeCCC
Confidence 8877422 22234789999765
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=5.9e-14 Score=142.40 Aligned_cols=159 Identities=15% Similarity=0.169 Sum_probs=114.2
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+|+|+||||||+||++++++|++.| .+|+++.|+.... +.+. ..++.++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G---~~Vi~~~r~~~~~---~~l~------------------------~~~~~~~ 52 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDG---WRVFATCRKEEDV---AALE------------------------AEGLEAF 52 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHH------------------------HCCceEE
Confidence 36899999999999999999999988 6788888864321 1111 1356788
Q ss_pred eccCCCCCCCCCchhhHHHHh--------CCccEEEEcCccCCc-------cccHHHHHHHhHHH----HHHHHHHHHHc
Q 008324 91 PGDISSEDLGLKDSNLKEELW--------NELDIMVNSAAITKF-------DERYDVAFGINTLG----VIHLVNFAKKC 151 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~--------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~g----t~~ll~la~~~ 151 (570)
.+|++++ +..+.++ ..+|+|||+||.... .+.++..+++|+.| ++.++..+++.
T Consensus 53 ~~Dl~d~-------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~ 125 (277)
T PRK05993 53 QLDYAEP-------ESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ 125 (277)
T ss_pred EccCCCH-------HHHHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc
Confidence 9999953 2222222 358999999986532 13356678999999 55566666654
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+..++|++||.+..... .....|
T Consensus 126 -~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 148 (277)
T PRK05993 126 -GQGRIVQCSSILGLVPM--------------------------------------------------------KYRGAY 148 (277)
T ss_pred -CCCEEEEECChhhcCCC--------------------------------------------------------CccchH
Confidence 56789999996433210 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCC
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~ 263 (570)
+.||+..|.+++.. ..++++++++||.|-.+.
T Consensus 149 ~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~ 185 (277)
T PRK05993 149 NASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRF 185 (277)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCch
Confidence 99999999988754 458999999999887653
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=7.5e-14 Score=141.12 Aligned_cols=197 Identities=13% Similarity=0.059 Sum_probs=128.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++|++|+||||||.||+.++++|++.| .+|.+..|+.... +.+.++ ..++.+
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~G---~~v~~~~r~~~~~---~~~~~~----------------------~~~~~~ 54 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAALG---ARVAIGDLDEALA---KETAAE----------------------LGLVVG 54 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHH----------------------hccceE
Confidence 458999999999999999999999988 5677777754221 111111 124678
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---cCceEEEE
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~l~~~V~ 159 (570)
+.+|+++++--....+........+|++||+||.... .+.++..+++|+.|+..+.+.+... .+..++|+
T Consensus 55 ~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~ 134 (273)
T PRK07825 55 GPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVN 134 (273)
T ss_pred EEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 8999995421000000011222468999999997532 1235667899999999988776532 25568999
Q ss_pred EecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHH
Q 008324 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (570)
Q Consensus 160 vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE 239 (570)
+||....... +....|+.||+..+
T Consensus 135 isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa~~ 158 (273)
T PRK07825 135 VASLAGKIPV--------------------------------------------------------PGMATYCASKHAVV 158 (273)
T ss_pred EcCccccCCC--------------------------------------------------------CCCcchHHHHHHHH
Confidence 9997543221 11246999998777
Q ss_pred HHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHH
Q 008324 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (570)
Q Consensus 240 ~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~ 314 (570)
.+.+.. ..++++++++|+.|-++.....+ .......++++++|++++.
T Consensus 159 ~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~---------------------------~~~~~~~~~~~~va~~~~~ 211 (273)
T PRK07825 159 GFTDAARLELRGTGVHVSVVLPSFVNTELIAGTG---------------------------GAKGFKNVEPEDVAAAIVG 211 (273)
T ss_pred HHHHHHHHHhhccCcEEEEEeCCcCcchhhcccc---------------------------cccCCCCCCHHHHHHHHHH
Confidence 665433 45899999999987554221000 0011236889999999998
Q ss_pred HHH
Q 008324 315 AMV 317 (570)
Q Consensus 315 a~~ 317 (570)
++.
T Consensus 212 ~l~ 214 (273)
T PRK07825 212 TVA 214 (273)
T ss_pred HHh
Confidence 875
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.2e-13 Score=138.30 Aligned_cols=223 Identities=16% Similarity=0.148 Sum_probs=143.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||++++++|++.| .+|++..|+..... .+.+.+. +. +. ..++.+
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G---~~Vi~~~~~~~~~~-~~~~~~~---------~~-~~--------~~~~~~ 104 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREG---ADVAISYLPVEEED-AQDVKKI---------IE-EC--------GRKAVL 104 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCC---CEEEEecCCcchhh-HHHHHHH---------HH-Hc--------CCeEEE
Confidence 678999999999999999999999998 56677666543221 1222211 00 10 246778
Q ss_pred EeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHH-ccC
Q 008324 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKK-CVK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~----f----~~~~~~~~~~Nv~gt~~ll~la~~-~~~ 153 (570)
+.+|++++ +....+ ...+|++||+||... + .+.++..+++|+.|+..+++.+.. ++.
T Consensus 105 ~~~Dl~~~-------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~ 177 (294)
T PRK07985 105 LPGDLSDE-------KFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK 177 (294)
T ss_pred EEccCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc
Confidence 99999953 322222 245899999998632 1 244677799999999999998875 323
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
-.++|++||...+... .....|+.
T Consensus 178 ~g~iv~iSS~~~~~~~--------------------------------------------------------~~~~~Y~a 201 (294)
T PRK07985 178 GASIITTSSIQAYQPS--------------------------------------------------------PHLLDYAA 201 (294)
T ss_pred CCEEEEECCchhccCC--------------------------------------------------------CCcchhHH
Confidence 3589999997654321 11246999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHH
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..+.+++.. ..++++.+++|+.|.++.... +.. .......+.... + ...+...+|+
T Consensus 202 sKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~--~~~-----~~~~~~~~~~~~----~-----~~r~~~pedv 265 (294)
T PRK07985 202 TKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQIS--GGQ-----TQDKIPQFGQQT----P-----MKRAGQPAEL 265 (294)
T ss_pred HHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccc--cCC-----CHHHHHHHhccC----C-----CCCCCCHHHH
Confidence 999998887755 358999999999999875321 000 011111111111 0 1123457899
Q ss_pred HHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+++..++..... .-.+.++.+.++
T Consensus 266 a~~~~fL~s~~~~-~itG~~i~vdgG 290 (294)
T PRK07985 266 APVYVYLASQESS-YVTAEVHGVCGG 290 (294)
T ss_pred HHHHHhhhChhcC-CccccEEeeCCC
Confidence 9999988753322 223677777765
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.4e-13 Score=136.20 Aligned_cols=227 Identities=13% Similarity=0.148 Sum_probs=140.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC-CcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA-DIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~-~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
++||+++||||+|+||.+++++|++.| .+|+++.+.. +.....+++.+++ ... ..++.
T Consensus 6 l~~k~vlItGa~~gIG~~~a~~l~~~G---~~vv~i~~~~~~~~~~~~~~~~~l---------~~~---------~~~~~ 64 (257)
T PRK12744 6 LKGKVVLIAGGAKNLGGLIARDLAAQG---AKAVAIHYNSAASKADAEETVAAV---------KAA---------GAKAV 64 (257)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCC---CcEEEEecCCccchHHHHHHHHHH---------HHh---------CCcEE
Confidence 578999999999999999999999988 4555565543 2222222222111 110 24678
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-ccC
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-CVK 153 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~~~ 153 (570)
.+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+..+++.+.. +..
T Consensus 65 ~~~~D~~~~-------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~ 137 (257)
T PRK12744 65 AFQADLTTA-------AAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND 137 (257)
T ss_pred EEecCcCCH-------HHHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc
Confidence 899999953 3333332 368999999997421 134567789999999999998865 322
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
-.++++++|..+.... +....|+.
T Consensus 138 ~~~iv~~~ss~~~~~~--------------------------------------------------------~~~~~Y~~ 161 (257)
T PRK12744 138 NGKIVTLVTSLLGAFT--------------------------------------------------------PFYSAYAG 161 (257)
T ss_pred CCCEEEEecchhcccC--------------------------------------------------------CCcccchh
Confidence 3456665433222110 11356999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHH
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..|.+++.+ ..++++++++|+.|.++...+..+ ..... ..... ....+.....+.+++|+
T Consensus 162 sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~-------~~~~~--~~~~~---~~~~~~~~~~~~~~~dv 229 (257)
T PRK12744 162 SKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEG-------AEAVA--YHKTA---AALSPFSKTGLTDIEDI 229 (257)
T ss_pred hHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccc-------cchhh--ccccc---ccccccccCCCCCHHHH
Confidence 999999998876 236999999999997764322111 00000 00000 00111112246789999
Q ss_pred HHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++..++.. ...-.++++++.++
T Consensus 230 a~~~~~l~~~--~~~~~g~~~~~~gg 253 (257)
T PRK12744 230 VPFIRFLVTD--GWWITGQTILINGG 253 (257)
T ss_pred HHHHHHhhcc--cceeecceEeecCC
Confidence 9999988862 11112678888776
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.6e-13 Score=136.29 Aligned_cols=227 Identities=16% Similarity=0.143 Sum_probs=141.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++++||||||+||++++++|++.| .+|+++.|+.... ...+++ ... ..++.+
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G---~~Vv~~~r~~~~~----~~~~~~---------~~~---------~~~~~~ 58 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHG---ANLILLDISPEIE----KLADEL---------CGR---------GHRCTA 58 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEecCCHHHH----HHHHHH---------HHh---------CCceEE
Confidence 578999999999999999999999998 5678888864211 111111 110 246778
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f~-------~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|++++ +..+.++ ..+|+|||+||..... +.++..+++|+.|+..+++.+... +
T Consensus 59 ~~~Dl~~~-------~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 131 (263)
T PRK08226 59 VVADVRDP-------ASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIAR 131 (263)
T ss_pred EECCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 99999953 2223332 3589999999975321 234556899999999999887642 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||........ .....|+
T Consensus 132 ~~~~iv~isS~~~~~~~~-------------------------------------------------------~~~~~Y~ 156 (263)
T PRK08226 132 KDGRIVMMSSVTGDMVAD-------------------------------------------------------PGETAYA 156 (263)
T ss_pred CCcEEEEECcHHhcccCC-------------------------------------------------------CCcchHH
Confidence 446899999864321100 1124699
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.+|+..|.+++.+ ..+++++.++|+.|.++..+...+... .......+.....+. + ...+.+.++
T Consensus 157 ~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~-------p--~~~~~~~~~ 226 (263)
T PRK08226 157 LTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSN-PEDPESVLTEMAKAI-------P--LRRLADPLE 226 (263)
T ss_pred HHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhcc-CCCcHHHHHHHhccC-------C--CCCCCCHHH
Confidence 9999998888755 247999999999998864322211100 011112222222211 1 122468899
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++++.++..... .-.++++-+.++
T Consensus 227 va~~~~~l~~~~~~-~~~g~~i~~dgg 252 (263)
T PRK08226 227 VGELAAFLASDESS-YLTGTQNVIDGG 252 (263)
T ss_pred HHHHHHHHcCchhc-CCcCceEeECCC
Confidence 99998877642221 122556666554
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.3e-13 Score=137.84 Aligned_cols=163 Identities=15% Similarity=0.126 Sum_probs=113.3
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+++||||||||+||+++++.|++.| .+|++++|+.... +.+.+. .. . ...++.++.
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G---~~v~~~~r~~~~~---~~~~~~---------~~-~--------~~~~~~~~~ 57 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKG---HNVIAGVQIAPQV---TALRAE---------AA-R--------RGLALRVEK 57 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHH---------HH-h--------cCCcceEEE
Confidence 5799999999999999999999988 6788888864321 111110 00 0 024578899
Q ss_pred ccCCCCCCCCCchhhHHHHhC-CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---cCceEEEEE
Q 008324 92 GDISSEDLGLKDSNLKEELWN-ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHV 160 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~-~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~l~~~V~v 160 (570)
+|+++ .+....+.. ++|+|||+|+.... .+.++..+++|+.|+.++.+.+... .+.+++|++
T Consensus 58 ~D~~~-------~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ 130 (257)
T PRK09291 58 LDLTD-------AIDRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFT 130 (257)
T ss_pred eeCCC-------HHHHHHHhcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 99995 333444444 79999999996532 1335667889999988776644321 245799999
Q ss_pred ecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHH
Q 008324 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (570)
Q Consensus 161 STa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~ 240 (570)
||....... +....|+.||+..|.
T Consensus 131 SS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~ 154 (257)
T PRK09291 131 SSMAGLITG--------------------------------------------------------PFTGAYCASKHALEA 154 (257)
T ss_pred cChhhccCC--------------------------------------------------------CCcchhHHHHHHHHH
Confidence 986422110 123579999999998
Q ss_pred HHHHh-----ccCCcEEEEecCceec
Q 008324 241 LMQQS-----KENLSLVIIRPTVVSG 261 (570)
Q Consensus 241 lv~~~-----~~~lp~~IvRPsiV~g 261 (570)
+++.. ..+++++++||+.+..
T Consensus 155 ~~~~l~~~~~~~gi~~~~v~pg~~~t 180 (257)
T PRK09291 155 IAEAMHAELKPFGIQVATVNPGPYLT 180 (257)
T ss_pred HHHHHHHHHHhcCcEEEEEecCcccc
Confidence 87654 3589999999988754
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.6e-13 Score=137.42 Aligned_cols=226 Identities=12% Similarity=0.101 Sum_probs=138.6
Q ss_pred cCCCEEEEECCcc--hhHHHHHHHHHHhCCCccEEEEEEcCCCccc------HHHH--HHHHHhhhhhHHHHHhhhcccc
Q 008324 10 LENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDS------AALR--FQNEVLAKDVFNVLKEKWGTRL 79 (570)
Q Consensus 10 ~~~k~VlITGaTG--FlG~~LvekLl~~~~~V~~V~~lvR~~~~~~------~~~r--l~~~l~~~~~f~~l~~~~~~~~ 79 (570)
++||+|+|||||| .||.+++++|++.| .+|+++.|+..+.. ..+. +.++ +..
T Consensus 3 l~~k~vlItGas~~~giG~~la~~l~~~G---~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~---------~~~------ 64 (256)
T PRK12748 3 LMKKIALVTGASRLNGIGAAVCRRLAAKG---IDIFFTYWSPYDKTMPWGMHDKEPVLLKEE---------IES------ 64 (256)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHcC---CcEEEEcCCccccccccccchhhHHHHHHH---------HHh------
Confidence 3689999999996 69999999999988 57788888632110 0000 1111 110
Q ss_pred ccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHHH-c
Q 008324 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAKK-C 151 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~-------~~~~~~~~~Nv~gt~~ll~la~~-~ 151 (570)
...++..+.+|+++++--....+........+|+|||+||..... +.++..+++|+.|+..+++.+.. +
T Consensus 65 ---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 141 (256)
T PRK12748 65 ---YGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQY 141 (256)
T ss_pred ---cCCeEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 124688999999953210000000111124589999999875321 23566789999999999988754 2
Q ss_pred --cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc
Q 008324 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (570)
Q Consensus 152 --~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
.+..++|++||...++... ...
T Consensus 142 ~~~~~~~iv~~ss~~~~~~~~--------------------------------------------------------~~~ 165 (256)
T PRK12748 142 DGKAGGRIINLTSGQSLGPMP--------------------------------------------------------DEL 165 (256)
T ss_pred hhcCCeEEEEECCccccCCCC--------------------------------------------------------Cch
Confidence 1345899999875543211 124
Q ss_pred hHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeee
Q 008324 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (570)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.|+.||+..|.+++.. ..+++++.++|+.+..+... +. ....... ..+. ..+..
T Consensus 166 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~------~~-------~~~~~~~---~~~~-----~~~~~ 224 (256)
T PRK12748 166 AYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWIT------EE-------LKHHLVP---KFPQ-----GRVGE 224 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCC------hh-------HHHhhhc---cCCC-----CCCcC
Confidence 6999999999998765 34799999999987654221 00 0000000 1111 12345
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.+++++++..++.... ..-.++++++.++
T Consensus 225 ~~~~a~~~~~l~~~~~-~~~~g~~~~~d~g 253 (256)
T PRK12748 225 PVDAARLIAFLVSEEA-KWITGQVIHSEGG 253 (256)
T ss_pred HHHHHHHHHHHhCccc-ccccCCEEEecCC
Confidence 6999999887664222 1223678888665
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.8e-13 Score=137.70 Aligned_cols=195 Identities=16% Similarity=0.171 Sum_probs=131.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++|++|+||||||+||+++++.|++.| .+|+++.|+... .+.+.++ +.+. ..++.+
T Consensus 38 ~~~k~vlItGasggIG~~la~~La~~G---~~Vi~~~R~~~~---l~~~~~~---------l~~~---------~~~~~~ 93 (293)
T PRK05866 38 LTGKRILLTGASSGIGEAAAEQFARRG---ATVVAVARREDL---LDAVADR---------ITRA---------GGDAMA 93 (293)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHH---------HHhc---------CCcEEE
Confidence 568999999999999999999999988 678899887422 1222211 1110 245778
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCcc---------ccHHHHHHHhHHHHHHHHHHHHH-c-
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKFD---------ERYDVAFGINTLGVIHLVNFAKK-C- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f~---------~~~~~~~~~Nv~gt~~ll~la~~-~- 151 (570)
+.+|++++ +....+++ ++|+|||+||..... +.++..+++|+.|+.++++.+.. +
T Consensus 94 ~~~Dl~d~-------~~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 166 (293)
T PRK05866 94 VPCDLSDL-------DAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGML 166 (293)
T ss_pred EEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999953 33334333 799999999975321 23456789999998888876542 1
Q ss_pred -cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+..++|++||..+..... +..+.
T Consensus 167 ~~~~g~iv~isS~~~~~~~~-------------------------------------------------------p~~~~ 191 (293)
T PRK05866 167 ERGDGHIINVATWGVLSEAS-------------------------------------------------------PLFSV 191 (293)
T ss_pred hcCCcEEEEECChhhcCCCC-------------------------------------------------------CCcch
Confidence 2557899999964432100 12357
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..+.+++.. ..++.+++++|+.|-++...+.. ...+ ...+..
T Consensus 192 Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~----------------------~~~~-----~~~~~p 244 (293)
T PRK05866 192 YNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTK----------------------AYDG-----LPALTA 244 (293)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccc----------------------cccC-----CCCCCH
Confidence 999999999887764 34799999999987665332100 0000 123678
Q ss_pred HHHHHHHHHHHH
Q 008324 306 DMVVNAMIVAMV 317 (570)
Q Consensus 306 Ddva~aii~a~~ 317 (570)
|++|+.++.++.
T Consensus 245 e~vA~~~~~~~~ 256 (293)
T PRK05866 245 DEAAEWMVTAAR 256 (293)
T ss_pred HHHHHHHHHHHh
Confidence 999999998885
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.3e-13 Score=142.63 Aligned_cols=176 Identities=16% Similarity=0.149 Sum_probs=116.7
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+.... +.+.++ ..++.+
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~G---~~Vv~~~R~~~~~---~~~~~~----------------------l~~v~~ 75 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQAG---AHVIVPARRPDVA---REALAG----------------------IDGVEV 75 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHH----------------------hhhCeE
Confidence 478999999999999999999999998 5788888864321 111101 023678
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-----cccHHHHHHHhHHHHHHHHHHHHH-c--cCc
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-----DERYDVAFGINTLGVIHLVNFAKK-C--VKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-----~~~~~~~~~~Nv~gt~~ll~la~~-~--~~l 154 (570)
+.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+..+++.+.. + .+.
T Consensus 76 ~~~Dl~d-------~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~ 148 (315)
T PRK06196 76 VMLDLAD-------LESVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAG 148 (315)
T ss_pred EEccCCC-------HHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 9999995 33333333 468999999996421 244677899999997776664432 1 134
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||....... ..........+ ......|+.|
T Consensus 149 ~~iV~vSS~~~~~~~---~~~~~~~~~~~-----------------------------------------~~~~~~Y~~S 184 (315)
T PRK06196 149 ARVVALSSAGHRRSP---IRWDDPHFTRG-----------------------------------------YDKWLAYGQS 184 (315)
T ss_pred CeEEEECCHHhccCC---CCccccCccCC-----------------------------------------CChHHHHHHH
Confidence 689999997432211 00000000000 0123579999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceecCCC
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYK 264 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ 264 (570)
|+..+.+.+.. ..+++++++|||.|.++..
T Consensus 185 K~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~ 219 (315)
T PRK06196 185 KTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQ 219 (315)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCcc
Confidence 99999887654 3579999999999988754
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=2e-13 Score=134.77 Aligned_cols=215 Identities=14% Similarity=0.129 Sum_probs=135.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.| .+|+++.|.... ..+.+. ++ .++.+
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G---~~v~~~~~~~~~--~~~~l~-------------~~----------~~~~~ 55 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDG---ANVRFTYAGSKD--AAERLA-------------QE----------TGATA 55 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEecCCCHH--HHHHHH-------------HH----------hCCeE
Confidence 568999999999999999999999988 466666654321 111111 11 13457
Q ss_pred EeccCCCCCCCCCchhhHHHHh---CCccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHHH-ccCceEEE
Q 008324 90 VPGDISSEDLGLKDSNLKEELW---NELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAKK-CVKLKVFV 158 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~---~~vdiViH~AA~v~f~-------~~~~~~~~~Nv~gt~~ll~la~~-~~~l~~~V 158 (570)
+.+|++++ +....++ ..+|+|||+||..... +.++..+++|+.|+..++..+.. ++.-.++|
T Consensus 56 ~~~D~~~~-------~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv 128 (237)
T PRK12742 56 VQTDSADR-------DAVIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRII 128 (237)
T ss_pred EecCCCCH-------HHHHHHHHHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEE
Confidence 78999853 3222333 3589999999875321 34677899999999999755544 44446899
Q ss_pred EEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHH
Q 008324 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (570)
Q Consensus 159 ~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~a 238 (570)
++||...... +. +....|+.||+..
T Consensus 129 ~isS~~~~~~--------~~-----------------------------------------------~~~~~Y~~sKaa~ 153 (237)
T PRK12742 129 IIGSVNGDRM--------PV-----------------------------------------------AGMAAYAASKSAL 153 (237)
T ss_pred EEeccccccC--------CC-----------------------------------------------CCCcchHHhHHHH
Confidence 9998643110 00 1235799999999
Q ss_pred HHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHH
Q 008324 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (570)
Q Consensus 239 E~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii 313 (570)
|.+++.. ..++.+++++|+.|..+.... . .+ .. ....... + ...+...+++++++.
T Consensus 154 ~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~---~-----~~--~~-~~~~~~~---~-----~~~~~~p~~~a~~~~ 214 (237)
T PRK12742 154 QGMARGLARDFGPRGITINVVQPGPIDTDANPA---N-----GP--MK-DMMHSFM---A-----IKRHGRPEEVAGMVA 214 (237)
T ss_pred HHHHHHHHHHHhhhCeEEEEEecCcccCCcccc---c-----cH--HH-HHHHhcC---C-----CCCCCCHHHHHHHHH
Confidence 9988764 347999999999987654311 0 00 00 1111100 0 012356789999988
Q ss_pred HHHHHhhCCCCCCceEEecCC
Q 008324 314 VAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 314 ~a~~~~~~~~~~~~iyni~s~ 334 (570)
.++.... ..-.+.++.+.++
T Consensus 215 ~l~s~~~-~~~~G~~~~~dgg 234 (237)
T PRK12742 215 WLAGPEA-SFVTGAMHTIDGA 234 (237)
T ss_pred HHcCccc-CcccCCEEEeCCC
Confidence 8774322 2122566666543
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.5e-13 Score=135.71 Aligned_cols=221 Identities=12% Similarity=0.152 Sum_probs=142.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||++++++|++.| .+|++..|+.... +.+.++ ++.. ..++.+
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~G---~~vvl~~r~~~~~---~~~~~~---------l~~~---------~~~~~~ 62 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEYG---AEIIINDITAERA---ELAVAK---------LRQE---------GIKAHA 62 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcC---CEEEEEcCCHHHH---HHHHHH---------HHhc---------CCeEEE
Confidence 479999999999999999999999998 5778888764221 111111 1110 245778
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|++++ +..+.++ ..+|+|||+||.... .+.++..+++|+.|+..+++.+... .
T Consensus 63 ~~~Dl~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 135 (254)
T PRK08085 63 APFNVTHK-------QEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKR 135 (254)
T ss_pred EecCCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 89999953 3233332 358999999996432 2456778999999999998877652 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... +....|+
T Consensus 136 ~~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 159 (254)
T PRK08085 136 QAGKIINICSMQSELGR--------------------------------------------------------DTITPYA 159 (254)
T ss_pred CCcEEEEEccchhccCC--------------------------------------------------------CCCcchH
Confidence 44689999986432110 1235799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..|.+++.. ..++++.+++|+.+.++...+... . ..+...+... . ....+...+|
T Consensus 160 ~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~---~----~~~~~~~~~~-~--------p~~~~~~~~~ 223 (254)
T PRK08085 160 ASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVE---D----EAFTAWLCKR-T--------PAARWGDPQE 223 (254)
T ss_pred HHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhcc---C----HHHHHHHHhc-C--------CCCCCcCHHH
Confidence 9999999998875 348999999999998875432211 0 0111111111 0 1123456799
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++++..++...... -.+++..+.++
T Consensus 224 va~~~~~l~~~~~~~-i~G~~i~~dgg 249 (254)
T PRK08085 224 LIGAAVFLSSKASDF-VNGHLLFVDGG 249 (254)
T ss_pred HHHHHHHHhCccccC-CcCCEEEECCC
Confidence 999988877532221 12555555544
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.55 E-value=2e-13 Score=138.12 Aligned_cols=226 Identities=12% Similarity=0.140 Sum_probs=140.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||||+||+++++.|++.| .+|+++.|+ .. .+.+.++ +++. ..++.+
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G---~~vi~~~r~-~~---~~~~~~~---------~~~~---------~~~~~~ 58 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEG---AYVLAVDIA-EA---VSETVDK---------IKSN---------GGKAKA 58 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCc-HH---HHHHHHH---------HHhc---------CCeEEE
Confidence 578999999999999999999999998 678888886 21 1111111 1110 246888
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc----c----ccHHHHHHHhHHHHHHHHHHHHHc--c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF----D----ERYDVAFGINTLGVIHLVNFAKKC--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f----~----~~~~~~~~~Nv~gt~~ll~la~~~--~ 152 (570)
+.+|++++ +..+.++ ..+|++||+||.... . +.++..+++|+.|+..+++.+... +
T Consensus 59 ~~~Dl~~~-------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 131 (272)
T PRK08589 59 YHVDISDE-------QQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMME 131 (272)
T ss_pred EEeecCCH-------HHHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 99999954 2222322 358999999987531 1 235667889999998887776542 1
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|++||....... .....|+
T Consensus 132 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 155 (272)
T PRK08589 132 QGGSIINTSSFSGQAAD--------------------------------------------------------LYRSGYN 155 (272)
T ss_pred cCCEEEEeCchhhcCCC--------------------------------------------------------CCCchHH
Confidence 12589999986533211 1235699
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+++.. ..++++..+.|+.|..+..+...+..+. .....+....... . + ...+...++
T Consensus 156 asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~--~~~~~~~~~~~~~---~---~--~~~~~~~~~ 225 (272)
T PRK08589 156 AAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSED--EAGKTFRENQKWM---T---P--LGRLGKPEE 225 (272)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchh--hHHHHHhhhhhcc---C---C--CCCCcCHHH
Confidence 9999999998765 4579999999999977643221111000 0000000000000 0 0 112457899
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++++.++...... -.++++.+.++
T Consensus 226 va~~~~~l~s~~~~~-~~G~~i~vdgg 251 (272)
T PRK08589 226 VAKLVVFLASDDSSF-ITGETIRIDGG 251 (272)
T ss_pred HHHHHHHHcCchhcC-cCCCEEEECCC
Confidence 999998877533222 23667777665
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.9e-13 Score=136.56 Aligned_cols=199 Identities=15% Similarity=0.102 Sum_probs=126.8
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|+||||||+||++++++|++.| .+|+++.|+.... +.+. ..++..+.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g---~~v~~~~r~~~~~---~~~~------------------------~~~~~~~~~ 52 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRG---YRVLAACRKPDDV---ARMN------------------------SLGFTGILL 52 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHh---HHHH------------------------hCCCeEEEe
Confidence 689999999999999999999988 5678888864221 1111 124667889
Q ss_pred cCCCCCCCCCchhhHHHH----hCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHH----HHHHHHccCceEE
Q 008324 93 DISSEDLGLKDSNLKEEL----WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHL----VNFAKKCVKLKVF 157 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l----~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~l----l~la~~~~~l~~~ 157 (570)
|+++++.- .+..+.+ ...+|.|+|+||.... .+.++..+++|+.|+.++ ++.+++. +..++
T Consensus 53 D~~~~~~~---~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~i 128 (256)
T PRK08017 53 DLDDPESV---ERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH-GEGRI 128 (256)
T ss_pred ecCCHHHH---HHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCCEE
Confidence 99853210 0111111 1457999999986432 133556789999998886 4444443 56789
Q ss_pred EEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHH
Q 008324 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (570)
Q Consensus 158 V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~ 237 (570)
|++||.+..... +..+.|+.||+.
T Consensus 129 v~~ss~~~~~~~--------------------------------------------------------~~~~~Y~~sK~~ 152 (256)
T PRK08017 129 VMTSSVMGLIST--------------------------------------------------------PGRGAYAASKYA 152 (256)
T ss_pred EEEcCcccccCC--------------------------------------------------------CCccHHHHHHHH
Confidence 999997443211 123579999999
Q ss_pred HHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHH
Q 008324 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (570)
Q Consensus 238 aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ai 312 (570)
.|.+.+.+ ..+++++++||+.+.+........... .. .....+....+++++||+++++
T Consensus 153 ~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~--------------~~--~~~~~~~~~~~~~~~~d~a~~~ 216 (256)
T PRK08017 153 LEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQS--------------DK--PVENPGIAARFTLGPEAVVPKL 216 (256)
T ss_pred HHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhh--------------cc--chhhhHHHhhcCCCHHHHHHHH
Confidence 99887643 457999999998775542211100000 00 0011111223568999999999
Q ss_pred HHHHH
Q 008324 313 IVAMV 317 (570)
Q Consensus 313 i~a~~ 317 (570)
..++.
T Consensus 217 ~~~~~ 221 (256)
T PRK08017 217 RHALE 221 (256)
T ss_pred HHHHh
Confidence 98875
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.4e-13 Score=135.02 Aligned_cols=220 Identities=10% Similarity=0.091 Sum_probs=136.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||||+||++++++|++.| .+|+++.+.... . .++.. +.++.. ..++..
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G---~~vv~~~~~~~~-~-~~~~~---------~~~~~~---------~~~~~~ 57 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDG---FKVVAGCGPNSP-R-RVKWL---------EDQKAL---------GFDFIA 57 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcC---CEEEEEcCCChH-H-HHHHH---------HHHHhc---------CCcEEE
Confidence 368999999999999999999999998 556665543211 1 11111 111110 245778
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~ 152 (570)
+.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+..+++.+.. + .
T Consensus 58 ~~~D~~~~-------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 130 (246)
T PRK12938 58 SEGNVGDW-------DSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVER 130 (246)
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 89999953 3232332 468999999997531 234667789999998887665543 1 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 131 ~~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~y~ 154 (246)
T PRK12938 131 GWGRIINISSVNGQKGQ--------------------------------------------------------FGQTNYS 154 (246)
T ss_pred CCeEEEEEechhccCCC--------------------------------------------------------CCChhHH
Confidence 55789999987433211 1235699
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.+|+..+.+++.. ..++++.+++|+.+.++...... ...+..+.... ....+...++
T Consensus 155 ~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~---------~~~~~~~~~~~---------~~~~~~~~~~ 216 (246)
T PRK12938 155 TAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR---------PDVLEKIVATI---------PVRRLGSPDE 216 (246)
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcC---------hHHHHHHHhcC---------CccCCcCHHH
Confidence 9999888776654 35799999999998876432110 11111111111 1123456899
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++++..++..... ...++++.+.++
T Consensus 217 v~~~~~~l~~~~~~-~~~g~~~~~~~g 242 (246)
T PRK12938 217 IGSIVAWLASEESG-FSTGADFSLNGG 242 (246)
T ss_pred HHHHHHHHcCcccC-CccCcEEEECCc
Confidence 99998887743222 223567766554
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.5e-13 Score=134.58 Aligned_cols=213 Identities=14% Similarity=0.069 Sum_probs=141.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||||+||+++++.|++.| .+|+++.|+... . . ...++.+
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~~~g---~~v~~~~r~~~~-----~-~-----------------------~~~~~~~ 51 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFLAAG---ATVVVCGRRAPE-----T-V-----------------------DGRPAEF 51 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCChhh-----h-h-----------------------cCCceEE
Confidence 579999999999999999999999988 578888886532 0 0 0246788
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-cc--
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-CV-- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~~-- 152 (570)
+.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+..+++.+.. +.
T Consensus 52 ~~~D~~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 124 (252)
T PRK07856 52 HAADVRDP-------DQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQ 124 (252)
T ss_pred EEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 99999953 3333333 357999999986432 134567789999999999998865 21
Q ss_pred -CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 153 -KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 153 -~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+..++|++||....... +....|
T Consensus 125 ~~~g~ii~isS~~~~~~~--------------------------------------------------------~~~~~Y 148 (252)
T PRK07856 125 PGGGSIVNIGSVSGRRPS--------------------------------------------------------PGTAAY 148 (252)
T ss_pred CCCcEEEEEcccccCCCC--------------------------------------------------------CCCchh
Confidence 23589999987543211 123579
Q ss_pred HHHHHHHHHHHHHh----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 232 VFTKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 232 ~~sK~~aE~lv~~~----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
+.||+..|.+++.. ...+.+..++|+.|.++..... +.+ .........+.. ...+...++
T Consensus 149 ~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~--~~~-----~~~~~~~~~~~~---------~~~~~~p~~ 212 (252)
T PRK07856 149 GAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELH--YGD-----AEGIAAVAATVP---------LGRLATPAD 212 (252)
T ss_pred HHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhh--ccC-----HHHHHHHhhcCC---------CCCCcCHHH
Confidence 99999999998765 2348899999999876543111 000 011111111110 112346789
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++++.++.... ..-.+.++.+.++
T Consensus 213 va~~~~~L~~~~~-~~i~G~~i~vdgg 238 (252)
T PRK07856 213 IAWACLFLASDLA-SYVSGANLEVHGG 238 (252)
T ss_pred HHHHHHHHcCccc-CCccCCEEEECCC
Confidence 9999888774222 2223677888776
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.1e-13 Score=133.88 Aligned_cols=216 Identities=12% Similarity=0.121 Sum_probs=140.0
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+||||+|+||++++++|++.| .+|+++.|+... ....+.. .... ...++.++.+
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g---~~vi~~~r~~~~--~~~~~~~-------------~~~~-----~~~~~~~~~~ 59 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDG---YRVIATYFSGND--CAKDWFE-------------EYGF-----TEDQVRLKEL 59 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcC---CEEEEEeCCcHH--HHHHHHH-------------Hhhc-----cCCeEEEEEc
Confidence 689999999999999999999988 678888887531 1111110 0000 1256889999
Q ss_pred cCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHH----HHccCc
Q 008324 93 DISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFA----KKCVKL 154 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la----~~~~~l 154 (570)
|++++ +....++ ..+|+|||+||.... .+.++..+++|+.|+.++.+.+ ++. +.
T Consensus 60 D~~~~-------~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~ 131 (245)
T PRK12824 60 DVTDT-------EECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-GY 131 (245)
T ss_pred CCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CC
Confidence 99953 3222322 358999999987531 2446677899999999986544 332 56
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||...+.... ....|+.|
T Consensus 132 ~~iv~iss~~~~~~~~--------------------------------------------------------~~~~Y~~s 155 (245)
T PRK12824 132 GRIINISSVNGLKGQF--------------------------------------------------------GQTNYSAA 155 (245)
T ss_pred eEEEEECChhhccCCC--------------------------------------------------------CChHHHHH
Confidence 7899999875543211 12369999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHH
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..+.+++.+ ..++++++++|+.+.++..+... . .....+.... ....+..+++++
T Consensus 156 K~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~---~------~~~~~~~~~~---------~~~~~~~~~~va 217 (245)
T PRK12824 156 KAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMG---P------EVLQSIVNQI---------PMKRLGTPEEIA 217 (245)
T ss_pred HHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcC---H------HHHHHHHhcC---------CCCCCCCHHHHH
Confidence 99888877654 34799999999998876443211 0 1111111111 112245678999
Q ss_pred HHHHHHHHHhhCCCCCCceEEecCC
Q 008324 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++..++..... .-.++++++.++
T Consensus 218 ~~~~~l~~~~~~-~~~G~~~~~~~g 241 (245)
T PRK12824 218 AAVAFLVSEAAG-FITGETISINGG 241 (245)
T ss_pred HHHHHHcCcccc-CccCcEEEECCC
Confidence 998877643222 223788998887
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.7e-13 Score=134.66 Aligned_cols=223 Identities=14% Similarity=0.131 Sum_probs=141.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||++++++|++.| .+|+++.|+.... .+.+.++ ++.. ..++..
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G---~~v~~~~r~~~~~--~~~~~~~---------l~~~---------~~~~~~ 62 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQAG---ADVALFDLRTDDG--LAETAEH---------IEAA---------GRRAIQ 62 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCcchH--HHHHHHH---------HHhc---------CCceEE
Confidence 579999999999999999999999988 5778888865321 1111111 1110 246778
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~ 152 (570)
+.+|+++++ ..+.++ ..+|+|||+||.... .+.++..+++|+.|+..+++.+.. + .
T Consensus 63 ~~~D~~~~~-------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 135 (254)
T PRK06114 63 IAADVTSKA-------DLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLEN 135 (254)
T ss_pred EEcCCCCHH-------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc
Confidence 999999542 222322 357999999997542 244677789999999888776643 2 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|++||........+ .....|+
T Consensus 136 ~~~~iv~isS~~~~~~~~~------------------------------------------------------~~~~~Y~ 161 (254)
T PRK06114 136 GGGSIVNIASMSGIIVNRG------------------------------------------------------LLQAHYN 161 (254)
T ss_pred CCcEEEEECchhhcCCCCC------------------------------------------------------CCcchHH
Confidence 3468999998653321110 1124699
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+++.. ..++++.+++|+.|.++.... +... .....+.... + ..-+..++|
T Consensus 162 ~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~-~~~~-------~~~~~~~~~~----p-----~~r~~~~~d 224 (254)
T PRK06114 162 ASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTR-PEMV-------HQTKLFEEQT----P-----MQRMAKVDE 224 (254)
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCccccc-ccch-------HHHHHHHhcC----C-----CCCCcCHHH
Confidence 9999888887655 457999999999998765321 1110 1111111110 0 112356799
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++++.++.... ..-.+++..+.++
T Consensus 225 va~~~~~l~s~~~-~~~tG~~i~~dgg 250 (254)
T PRK06114 225 MVGPAVFLLSDAA-SFCTGVDLLVDGG 250 (254)
T ss_pred HHHHHHHHcCccc-cCcCCceEEECcC
Confidence 9999988775322 2223667776655
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.2e-13 Score=133.02 Aligned_cols=219 Identities=20% Similarity=0.234 Sum_probs=139.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEE-EcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF-VRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~l-vR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+.+|+|+||||||+||+.+++.|++.| .+|+++ .|+.... +.+. +.+.. ...++.
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g---~~v~~~~~r~~~~~---~~~~---------~~~~~---------~~~~~~ 58 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEG---AKVVIAYDINEEAA---QELL---------EEIKE---------EGGDAI 58 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEcCCCHHHH---HHHH---------HHHHh---------cCCeEE
Confidence 467899999999999999999999988 566777 6653221 1111 11111 024688
Q ss_pred EEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~--- 151 (570)
++.+|++++ +....+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 59 ~~~~D~~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 131 (247)
T PRK05565 59 AVKADVSSE-------EDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIK 131 (247)
T ss_pred EEECCCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 999999953 32323332 79999999997632 1345677899999999998877642
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||........ ....|
T Consensus 132 ~~~~~~v~~sS~~~~~~~~--------------------------------------------------------~~~~y 155 (247)
T PRK05565 132 RKSGVIVNISSIWGLIGAS--------------------------------------------------------CEVLY 155 (247)
T ss_pred cCCcEEEEECCHhhccCCC--------------------------------------------------------CccHH
Confidence 2456799999865432211 12358
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+++.. ..+++++++||+.+.++....... ........ . .....+...+
T Consensus 156 ~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~---------~~~~~~~~----~-----~~~~~~~~~~ 217 (247)
T PRK05565 156 SASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSE---------EDKEGLAE----E-----IPLGRLGKPE 217 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccCh---------HHHHHHHh----c-----CCCCCCCCHH
Confidence 88888777766544 458999999999987654321110 00111110 0 0112346789
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++++++.++...... -.++++++..+
T Consensus 218 ~va~~~~~l~~~~~~~-~~g~~~~~~~~ 244 (247)
T PRK05565 218 EIAKVVLFLASDDASY-ITGQIITVDGG 244 (247)
T ss_pred HHHHHHHHHcCCccCC-ccCcEEEecCC
Confidence 9999988887533222 23677777665
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.8e-13 Score=136.82 Aligned_cols=220 Identities=13% Similarity=0.096 Sum_probs=141.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||||+||.+++++|++.| .+|++..|+... .+.+.+ .++.. ..++.+
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~---------~l~~~---------~~~~~~ 62 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAG---AQVAIAARHLDA---LEKLAD---------EIGTS---------GGKVVP 62 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCHHH---HHHHHH---------HHHhc---------CCeEEE
Confidence 579999999999999999999999998 577888886432 122221 11111 246788
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c-cC
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C-VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~-~~ 153 (570)
+.+|++++ +..+.++ ..+|++||+||.... .+.++..+++|+.|+..+++++.. + ++
T Consensus 63 ~~~D~~~~-------~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 135 (253)
T PRK05867 63 VCCDVSQH-------QQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQ 135 (253)
T ss_pred EEccCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhc
Confidence 99999953 3222332 479999999997542 134566789999999999998754 2 11
Q ss_pred --ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 154 --LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 154 --l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
-.++|++||........ + .....|
T Consensus 136 ~~~g~iv~~sS~~~~~~~~--------~----------------------------------------------~~~~~Y 161 (253)
T PRK05867 136 GQGGVIINTASMSGHIINV--------P----------------------------------------------QQVSHY 161 (253)
T ss_pred CCCcEEEEECcHHhcCCCC--------C----------------------------------------------CCccch
Confidence 24688888764321000 0 112469
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+++.. ..++++..++||.|-++..+..+. ......... + ...+...+
T Consensus 162 ~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~----------~~~~~~~~~----~-----~~r~~~p~ 222 (253)
T PRK05867 162 CASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTE----------YQPLWEPKI----P-----LGRLGRPE 222 (253)
T ss_pred HHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchH----------HHHHHHhcC----C-----CCCCcCHH
Confidence 99999999998765 347999999999997764322111 011111110 0 11246789
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++|++++.++.... ..-.+++..+.+|
T Consensus 223 ~va~~~~~L~s~~~-~~~tG~~i~vdgG 249 (253)
T PRK05867 223 ELAGLYLYLASEAS-SYMTGSDIVIDGG 249 (253)
T ss_pred HHHHHHHHHcCccc-CCcCCCeEEECCC
Confidence 99999998875322 2223667777665
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.9e-13 Score=134.23 Aligned_cols=187 Identities=12% Similarity=0.132 Sum_probs=130.1
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+++++||||||+||++++++|++.| .+|+++.|+... .+.+. .. ..++.++.
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G---~~V~~~~r~~~~---~~~~~-------------~~---------~~~~~~~~ 52 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQG---WQVIACGRNQSV---LDELH-------------TQ---------SANIFTLA 52 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCC---CEEEEEECCHHH---HHHHH-------------Hh---------cCCCeEEE
Confidence 3789999999999999999999988 578888886421 11111 00 14678899
Q ss_pred ccCCCCCCCCCchhhHHHHhCC----ccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc-cCceEEEE
Q 008324 92 GDISSEDLGLKDSNLKEELWNE----LDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVH 159 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~----vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~l~~~V~ 159 (570)
+|+++ .+..+.++++ +|+++|+||...+ .+.++..+++|+.|+.++++.+... .+-.++|.
T Consensus 53 ~D~~~-------~~~~~~~~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~ 125 (240)
T PRK06101 53 FDVTD-------HPGTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVI 125 (240)
T ss_pred eeCCC-------HHHHHHHHHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEE
Confidence 99995 3333444443 6899999986432 1235667999999999999998763 23457888
Q ss_pred EecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHH
Q 008324 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (570)
Q Consensus 160 vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE 239 (570)
+||....... .....|+.||+..|
T Consensus 126 isS~~~~~~~--------------------------------------------------------~~~~~Y~asK~a~~ 149 (240)
T PRK06101 126 VGSIASELAL--------------------------------------------------------PRAEAYGASKAAVA 149 (240)
T ss_pred EechhhccCC--------------------------------------------------------CCCchhhHHHHHHH
Confidence 8885421110 11346999999999
Q ss_pred HHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHH
Q 008324 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (570)
Q Consensus 240 ~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~ 314 (570)
.+.+.+ ..+++++++||+.|.++..... . . + ....++.+++|+.++.
T Consensus 150 ~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~-------~----------------~--~---~~~~~~~~~~a~~i~~ 201 (240)
T PRK06101 150 YFARTLQLDLRPKGIEVVTVFPGFVATPLTDKN-------T----------------F--A---MPMIITVEQASQEIRA 201 (240)
T ss_pred HHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCC-------C----------------C--C---CCcccCHHHHHHHHHH
Confidence 987654 4589999999999988643210 0 0 0 0114789999999998
Q ss_pred HHH
Q 008324 315 AMV 317 (570)
Q Consensus 315 a~~ 317 (570)
++.
T Consensus 202 ~i~ 204 (240)
T PRK06101 202 QLA 204 (240)
T ss_pred HHh
Confidence 886
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.7e-13 Score=142.22 Aligned_cols=199 Identities=16% Similarity=0.173 Sum_probs=118.6
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+|+||||||+||.++++.|++.| .+|+++.|+.... +.+.++ +.. ...++.++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G---~~V~~~~r~~~~~---~~~~~~---------l~~---------~~~~~~~~ 60 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRG---WHVIMACRNLKKA---EAAAQE---------LGI---------PPDSYTII 60 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHH---------hhc---------cCCceEEE
Confidence 58999999999999999999999988 6788888864221 111111 100 02468889
Q ss_pred eccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHH-cc--
Q 008324 91 PGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKK-CV-- 152 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f--------~~~~~~~~~~Nv~gt~~ll~la~~-~~-- 152 (570)
.+|++++ +..+.+++ .+|+|||+||.... .+.++..+++|+.|+.++++++.. +.
T Consensus 61 ~~Dl~~~-------~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 133 (322)
T PRK07453 61 HIDLGDL-------DSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKS 133 (322)
T ss_pred EecCCCH-------HHHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhC
Confidence 9999953 33333332 48999999996421 134667789999999999888764 21
Q ss_pred C--ceEEEEEecceeecCC-CcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc
Q 008324 153 K--LKVFVHVSTAYVAGER-TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (570)
Q Consensus 153 ~--l~~~V~vSTa~v~~~~-~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
+ ..++|++||...+... .+... .+ .+.+.+... .... .. .............+.+
T Consensus 134 ~~~~~riV~vsS~~~~~~~~~~~~~---~~--~~~~~~~~~--------~~~~-~~--------~~~~~~~~~~~~~~~~ 191 (322)
T PRK07453 134 PAPDPRLVILGTVTANPKELGGKIP---IP--APADLGDLS--------GFEA-GF--------KAPISMADGKKFKPGK 191 (322)
T ss_pred CCCCceEEEEcccccCccccCCccC---CC--Cccchhhhh--------cchh-cc--------cccccccCccCCCccc
Confidence 1 2589999997654321 11100 00 000100000 0000 00 0000000000113346
Q ss_pred hHHHHHHHHHHHHHHh------ccCCcEEEEecCceecC
Q 008324 230 TYVFTKTMGEMLMQQS------KENLSLVIIRPTVVSGT 262 (570)
Q Consensus 230 ~Y~~sK~~aE~lv~~~------~~~lp~~IvRPsiV~g~ 262 (570)
.|+.||...+.+..++ ..+++++.+|||.|+++
T Consensus 192 ~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t 230 (322)
T PRK07453 192 AYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADT 230 (322)
T ss_pred hhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence 8999999877766544 13799999999999764
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.5e-13 Score=130.99 Aligned_cols=213 Identities=16% Similarity=0.153 Sum_probs=141.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||+++++.|++.| .+|+++.|+..... ..++..
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G---~~v~~~~r~~~~~~------------------------------~~~~~~ 49 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQG---AQVYGVDKQDKPDL------------------------------SGNFHF 49 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCC---CEEEEEeCCccccc------------------------------CCcEEE
Confidence 578999999999999999999999988 56777777643210 246778
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHHc---cCceEEE
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~----f----~~~~~~~~~~Nv~gt~~ll~la~~~---~~l~~~V 158 (570)
+.+|++++ .+........+|+|||+|+... + .+.++..+++|+.|+.++++.+... .+-.++|
T Consensus 50 ~~~D~~~~------~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv 123 (235)
T PRK06550 50 LQLDLSDD------LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIII 123 (235)
T ss_pred EECChHHH------HHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 99999853 1222233467999999998542 1 2346677999999999999988642 1335799
Q ss_pred EEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHH
Q 008324 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (570)
Q Consensus 159 ~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~a 238 (570)
++||....... .....|+.+|+..
T Consensus 124 ~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~ 147 (235)
T PRK06550 124 NMCSIASFVAG--------------------------------------------------------GGGAAYTASKHAL 147 (235)
T ss_pred EEcChhhccCC--------------------------------------------------------CCCcccHHHHHHH
Confidence 99997643221 1124699999988
Q ss_pred HHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHH
Q 008324 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (570)
Q Consensus 239 E~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii 313 (570)
+.+.+.. ..++++++++|+.|.++.... .+.+ .........+. ....+...+++|++++
T Consensus 148 ~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~--~~~~-----~~~~~~~~~~~---------~~~~~~~~~~~a~~~~ 211 (235)
T PRK06550 148 AGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAA--DFEP-----GGLADWVARET---------PIKRWAEPEEVAELTL 211 (235)
T ss_pred HHHHHHHHHHhhhcCeEEEEEeeCCccCccccc--ccCc-----hHHHHHHhccC---------CcCCCCCHHHHHHHHH
Confidence 8877654 348999999999998765321 1111 01111111111 1123567799999999
Q ss_pred HHHHHhhCCCCCCceEEecCC
Q 008324 314 VAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 314 ~a~~~~~~~~~~~~iyni~s~ 334 (570)
.++...... ..+.++.+.++
T Consensus 212 ~l~s~~~~~-~~g~~~~~~gg 231 (235)
T PRK06550 212 FLASGKADY-MQGTIVPIDGG 231 (235)
T ss_pred HHcChhhcc-CCCcEEEECCc
Confidence 888533222 22567766654
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.9e-13 Score=135.66 Aligned_cols=190 Identities=11% Similarity=0.142 Sum_probs=128.8
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|+||||||+||++++++|++.| .+|+++.|+... .+++. ++.+. ..++.++.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G---~~v~~~~r~~~~---~~~~~-------------~~~~~------~~~~~~~~ 56 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQG---ATLGLVARRTDA---LQAFA-------------ARLPK------AARVSVYA 56 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------Hhccc------CCeeEEEE
Confidence 5799999999999999999999988 577888886421 11111 11110 12688899
Q ss_pred ccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc----c----ccHHHHHHHhHHHHHHHHHHHH-Hc--cC
Q 008324 92 GDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF----D----ERYDVAFGINTLGVIHLVNFAK-KC--VK 153 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f----~----~~~~~~~~~Nv~gt~~ll~la~-~~--~~ 153 (570)
+|++++ +....++ ..+|+|||+||.... . +.++..+++|+.|+.++++... .+ .+
T Consensus 57 ~Dl~~~-------~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~ 129 (257)
T PRK07024 57 ADVRDA-------DALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR 129 (257)
T ss_pred cCCCCH-------HHHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC
Confidence 999954 2232332 348999999997431 1 3356778999999999887432 12 24
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|.+||....... +....|+.
T Consensus 130 ~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 153 (257)
T PRK07024 130 RGTLVGIASVAGVRGL--------------------------------------------------------PGAGAYSA 153 (257)
T ss_pred CCEEEEEechhhcCCC--------------------------------------------------------CCCcchHH
Confidence 5689999986543211 11246999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHH
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..|.+.+.. ..+++++++||+.|.++.... + + ... ...++.+++
T Consensus 154 sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~------~-------------~-----~~~----~~~~~~~~~ 205 (257)
T PRK07024 154 SKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAH------N-------------P-----YPM----PFLMDADRF 205 (257)
T ss_pred HHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhc------C-------------C-----CCC----CCccCHHHH
Confidence 999999988654 358999999999998753211 0 0 000 013689999
Q ss_pred HHHHHHHHH
Q 008324 309 VNAMIVAMV 317 (570)
Q Consensus 309 a~aii~a~~ 317 (570)
++.++.++.
T Consensus 206 a~~~~~~l~ 214 (257)
T PRK07024 206 AARAARAIA 214 (257)
T ss_pred HHHHHHHHh
Confidence 999998885
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.1e-13 Score=134.19 Aligned_cols=222 Identities=14% Similarity=0.070 Sum_probs=140.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||||.||.++++.|++.| .+|+++.|++... +.+.+ .++.. ..++.+
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~G---~~v~~~~r~~~~~---~~~~~---------~~~~~---------~~~~~~ 59 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFAREG---AKVVVGARRQAEL---DQLVA---------EIRAE---------GGEAVA 59 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHH---------HHHhc---------CCcEEE
Confidence 468999999999999999999999998 5788998875321 11111 11111 246788
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHH-c--
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKK-C-- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f--------~~~~~~~~~~Nv~gt~~ll~la~~-~-- 151 (570)
+.+|++++ +..+.++ ..+|++||+||.... .+.++..+++|+.|+..+.+.+.. +
T Consensus 60 ~~~D~~~~-------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~ 132 (254)
T PRK07478 60 LAGDVRDE-------AYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLA 132 (254)
T ss_pred EEcCCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 99999953 3333333 368999999997421 134667799999988887665543 1
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.++|++||...+.... +....|
T Consensus 133 ~~~~~iv~~sS~~~~~~~~-------------------------------------------------------~~~~~Y 157 (254)
T PRK07478 133 RGGGSLIFTSTFVGHTAGF-------------------------------------------------------PGMAAY 157 (254)
T ss_pred cCCceEEEEechHhhccCC-------------------------------------------------------CCcchh
Confidence 2446799999975432100 112579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+++.. ..++.+..++|+.|-.+...... . .. . ......... ....+...+
T Consensus 158 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~---~~-~-~~~~~~~~~--------~~~~~~~~~ 221 (254)
T PRK07478 158 AASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMG---D---TP-E-ALAFVAGLH--------ALKRMAQPE 221 (254)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCccccccc---C---CH-H-HHHHHHhcC--------CCCCCcCHH
Confidence 99999999888765 34799999999998765321110 0 00 0 001111100 012245789
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++++++.++..... .-.++++.+.++
T Consensus 222 ~va~~~~~l~s~~~~-~~~G~~~~~dgg 248 (254)
T PRK07478 222 EIAQAALFLASDAAS-FVTGTALLVDGG 248 (254)
T ss_pred HHHHHHHHHcCchhc-CCCCCeEEeCCc
Confidence 999999887753222 223566666544
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.3e-13 Score=135.62 Aligned_cols=160 Identities=16% Similarity=0.226 Sum_probs=113.1
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+||||||+||++++++|++.| .+|+++.|++... +.+.+ . ...++.++.+
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~-------------~--------~~~~~~~~~~ 53 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQG---HKVIATGRRQERL---QELKD-------------E--------LGDNLYIAQL 53 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHH-------------H--------hccceEEEEe
Confidence 579999999999999999999988 5788888865321 11111 1 0246888999
Q ss_pred cCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHH-c--cCc
Q 008324 93 DISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKK-C--VKL 154 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~----f----~~~~~~~~~~Nv~gt~~ll~la~~-~--~~l 154 (570)
|++++ +..+.++ .++|+|||+||... + .+.++..+++|+.|+..+++.+.. + .+.
T Consensus 54 Dl~~~-------~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 126 (248)
T PRK10538 54 DVRNR-------AAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNH 126 (248)
T ss_pred cCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 99953 3222322 36999999998632 1 134567789999997777666543 1 256
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||...... + ...+.|+.|
T Consensus 127 ~~iv~isS~~~~~~---------~-----------------------------------------------~~~~~Y~~s 150 (248)
T PRK10538 127 GHIINIGSTAGSWP---------Y-----------------------------------------------AGGNVYGAT 150 (248)
T ss_pred cEEEEECCcccCCC---------C-----------------------------------------------CCCchhHHH
Confidence 78999999653211 0 113579999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceecC
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGT 262 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
|+..|.+.+.. ..++.+.+++||.+.|+
T Consensus 151 K~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~ 183 (248)
T PRK10538 151 KAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGT 183 (248)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEeCCeeccc
Confidence 99999988765 34799999999999865
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.7e-13 Score=132.21 Aligned_cols=218 Identities=12% Similarity=0.125 Sum_probs=139.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||+|+||++++++|++.| .+|++..|.... ..+.+. .+. ..++.+
T Consensus 3 l~~k~ilItGas~gIG~~la~~l~~~G---~~vv~~~~~~~~--~~~~~~-------------~~~--------~~~~~~ 56 (253)
T PRK08642 3 ISEQTVLVTGGSRGLGAAIARAFAREG---ARVVVNYHQSED--AAEALA-------------DEL--------GDRAIA 56 (253)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCC---CeEEEEcCCCHH--HHHHHH-------------HHh--------CCceEE
Confidence 467999999999999999999999998 566665553321 111111 111 246788
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------C-ccEEEEcCccCC---------c----cccHHHHHHHhHHHHHHHHHHH
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------E-LDIMVNSAAITK---------F----DERYDVAFGINTLGVIHLVNFA 148 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~-vdiViH~AA~v~---------f----~~~~~~~~~~Nv~gt~~ll~la 148 (570)
+.+|++++ +..+.+++ . +|+|||+|+... + .+.+...+++|+.|+.++++.+
T Consensus 57 ~~~D~~~~-------~~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 129 (253)
T PRK08642 57 LQADVTDR-------EQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAA 129 (253)
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHH
Confidence 99999953 22223332 3 899999997521 1 1335567899999999999988
Q ss_pred HHc---cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccC
Q 008324 149 KKC---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLH 225 (570)
Q Consensus 149 ~~~---~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 225 (570)
... .+..++|++||...... .
T Consensus 130 ~~~~~~~~~g~iv~iss~~~~~~---------~----------------------------------------------- 153 (253)
T PRK08642 130 LPGMREQGFGRIINIGTNLFQNP---------V----------------------------------------------- 153 (253)
T ss_pred HHHHHhcCCeEEEEECCccccCC---------C-----------------------------------------------
Confidence 642 24468999988532110 0
Q ss_pred CCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeee
Q 008324 226 GWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIM 300 (570)
Q Consensus 226 ~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~ 300 (570)
.+.+.|+.||+..|.+++.+ ..++.+..++|+.|..+... .. ............ . ...
T Consensus 154 ~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~---~~-----~~~~~~~~~~~~-~--------~~~ 216 (253)
T PRK08642 154 VPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDAS---AA-----TPDEVFDLIAAT-T--------PLR 216 (253)
T ss_pred CCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhh---cc-----CCHHHHHHHHhc-C--------CcC
Confidence 12357999999999999875 34789999999988764221 11 011111111111 1 112
Q ss_pred eeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 301 d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.+...+|+++++..++.... ..-.|+++.+.++
T Consensus 217 ~~~~~~~va~~~~~l~~~~~-~~~~G~~~~vdgg 249 (253)
T PRK08642 217 KVTTPQEFADAVLFFASPWA-RAVTGQNLVVDGG 249 (253)
T ss_pred CCCCHHHHHHHHHHHcCchh-cCccCCEEEeCCC
Confidence 36888999999998875322 2233677777665
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=9.3e-13 Score=130.99 Aligned_cols=220 Identities=13% Similarity=0.123 Sum_probs=140.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++|++++||||+|+||..+++.|++.| .+|+++.|+.... +...++ ++.. ..++..
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G---~~vi~~~r~~~~~---~~~~~~---------~~~~---------~~~~~~ 58 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKG---AKLALIDLNQEKL---EEAVAE---------CGAL---------GTEVRG 58 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHH---------HHhc---------CCceEE
Confidence 578999999999999999999999988 5678888765321 111111 1110 246788
Q ss_pred EeccCCCCCCCCCchhhHHHH---hCCccEEEEcCccCCc----------------cccHHHHHHHhHHHHHHHHHHHHH
Q 008324 90 VPGDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITKF----------------DERYDVAFGINTLGVIHLVNFAKK 150 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l---~~~vdiViH~AA~v~f----------------~~~~~~~~~~Nv~gt~~ll~la~~ 150 (570)
+.+|+++++. -.+..+.+ ...+|+|||+||.... .+.+...+++|+.|+..+++.+..
T Consensus 59 ~~~D~~~~~~---~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 135 (253)
T PRK08217 59 YAANVTDEED---VEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAA 135 (253)
T ss_pred EEcCCCCHHH---HHHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 9999995320 01111111 1358999999985321 133456678999999888765443
Q ss_pred -c---cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCC
Q 008324 151 -C---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHG 226 (570)
Q Consensus 151 -~---~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 226 (570)
+ ..-..+|++||...++. .
T Consensus 136 ~l~~~~~~~~iv~~ss~~~~~~---------------------------------------------------------~ 158 (253)
T PRK08217 136 KMIESGSKGVIINISSIARAGN---------------------------------------------------------M 158 (253)
T ss_pred HHHhcCCCeEEEEEccccccCC---------------------------------------------------------C
Confidence 1 12246888988754432 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeee
Q 008324 227 WPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMD 301 (570)
Q Consensus 227 ~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d 301 (570)
....|+.||+..|.+++.. ..+++++.++|+.|.++...... .........+. ....
T Consensus 159 ~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~---------~~~~~~~~~~~---------~~~~ 220 (253)
T PRK08217 159 GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMK---------PEALERLEKMI---------PVGR 220 (253)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC---------HHHHHHHHhcC---------CcCC
Confidence 1356999999999988765 35799999999999876542210 11111111111 1123
Q ss_pred eeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 302 ~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+.+++++|+++..++.. ....+++|++.++
T Consensus 221 ~~~~~~~a~~~~~l~~~---~~~~g~~~~~~gg 250 (253)
T PRK08217 221 LGEPEEIAHTVRFIIEN---DYVTGRVLEIDGG 250 (253)
T ss_pred CcCHHHHHHHHHHHHcC---CCcCCcEEEeCCC
Confidence 56889999999988852 2223789998876
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.53 E-value=6.5e-13 Score=132.80 Aligned_cols=227 Identities=15% Similarity=0.114 Sum_probs=138.3
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
||+++||||+|+||.++++.|++.| .+|+++.|+... .+++..++ .. ...++.++.
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G---~~v~~~~r~~~~---~~~~~~~~---------~~---------~~~~~~~~~ 57 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDG---FKVAIVDYNEET---AQAAADKL---------SK---------DGGKAIAVK 57 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHHH---------Hh---------cCCeEEEEE
Confidence 7899999999999999999999988 578888886532 12222111 10 024678899
Q ss_pred ccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc----cC
Q 008324 92 GDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC----VK 153 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~----~~ 153 (570)
+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+..+++.+... +.
T Consensus 58 ~Dl~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 130 (256)
T PRK08643 58 ADVSDR-------DQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGH 130 (256)
T ss_pred CCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 999964 2222222 368999999987432 1345677899999998887777542 12
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||....... .....|+.
T Consensus 131 ~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~ 154 (256)
T PRK08643 131 GGKIINATSQAGVVGN--------------------------------------------------------PELAVYSS 154 (256)
T ss_pred CCEEEEECccccccCC--------------------------------------------------------CCCchhHH
Confidence 3578999886432110 11246999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCC-ccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFP-GWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~-gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
||+..|.+++.+ ..+++++.++|+.|.++...... ...++.............. .. ....+...++
T Consensus 155 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----~~~~~~~~~~ 226 (256)
T PRK08643 155 TKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAK---DI-----TLGRLSEPED 226 (256)
T ss_pred HHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhc---cC-----CCCCCcCHHH
Confidence 999888877654 35799999999999775421100 0000000000000000000 00 0112457899
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++++..++..... .-.+.++.+.++
T Consensus 227 va~~~~~L~~~~~~-~~~G~~i~vdgg 252 (256)
T PRK08643 227 VANCVSFLAGPDSD-YITGQTIIVDGG 252 (256)
T ss_pred HHHHHHHHhCcccc-CccCcEEEeCCC
Confidence 99999888753322 223677777655
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=5.2e-13 Score=133.89 Aligned_cols=227 Identities=16% Similarity=0.135 Sum_probs=142.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||.+++++|++.| .+|+++.|++.. .+.+.++ ++... ...++.+
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~G---~~vv~~~r~~~~---~~~~~~~---------~~~~~-------~~~~~~~ 62 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFAREG---AAVALADLDAAL---AERAAAA---------IARDV-------AGARVLA 62 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHhcc-------CCceEEE
Confidence 679999999999999999999999998 678888886432 1221111 11110 1246888
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~ 152 (570)
+.+|++++ +..+.++ ..+|++||+||...+ .+.++..+++|+.|+..+++.+.. + .
T Consensus 63 ~~~Dl~~~-------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 135 (260)
T PRK07063 63 VPADVTDA-------ASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER 135 (260)
T ss_pred EEccCCCH-------HHHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh
Confidence 99999953 3233333 368999999996532 245677789999999999888754 2 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 136 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 159 (260)
T PRK07063 136 GRGSIVNIASTHAFKII--------------------------------------------------------PGCFPYP 159 (260)
T ss_pred CCeEEEEECChhhccCC--------------------------------------------------------CCchHHH
Confidence 44689999997543211 1124699
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+++.. ..++++..++|+.|-.+..... |.. ............ ... + ..-+...++
T Consensus 160 ~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~--~~~-~~~~~~~~~~~~-~~~---~-----~~r~~~~~~ 227 (260)
T PRK07063 160 VAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDW--WNA-QPDPAAARAETL-ALQ---P-----MKRIGRPEE 227 (260)
T ss_pred HHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhh--hhc-cCChHHHHHHHH-hcC---C-----CCCCCCHHH
Confidence 9999999888765 3479999999999876543210 100 001111111111 100 0 011346799
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++++.++..... --.+++..+.++
T Consensus 228 va~~~~fl~s~~~~-~itG~~i~vdgg 253 (260)
T PRK07063 228 VAMTAVFLASDEAP-FINATCITIDGG 253 (260)
T ss_pred HHHHHHHHcCcccc-ccCCcEEEECCC
Confidence 99999988753221 122566666554
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=5.4e-13 Score=134.68 Aligned_cols=201 Identities=14% Similarity=0.159 Sum_probs=129.8
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+||||||+||++++++|++.| .+|++..|+.... +.+. ..++.. ..++.++.+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g---~~V~~~~r~~~~~---~~~~---------~~l~~~---------~~~~~~~~~ 56 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREG---WRLALADVNEEGG---EETL---------KLLREA---------GGDGFYQRC 56 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHH---------HHHHhc---------CCceEEEEc
Confidence 579999999999999999999998 5778888864321 1111 111111 246788999
Q ss_pred cCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc---c----ccHHHHHHHhHHHHHHHHHHH----HHccCc
Q 008324 93 DISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF---D----ERYDVAFGINTLGVIHLVNFA----KKCVKL 154 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f---~----~~~~~~~~~Nv~gt~~ll~la----~~~~~l 154 (570)
|++++ +..+.++ ..+|+|||+||.... . +.++..+++|+.|+.++.+.+ ++. +.
T Consensus 57 D~~~~-------~~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~ 128 (270)
T PRK05650 57 DVRDY-------SQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQ-KS 128 (270)
T ss_pred cCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-CC
Confidence 99953 2223333 369999999997642 1 335566889998888876654 333 56
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||....... +....|+.|
T Consensus 129 ~~iv~vsS~~~~~~~--------------------------------------------------------~~~~~Y~~s 152 (270)
T PRK05650 129 GRIVNIASMAGLMQG--------------------------------------------------------PAMSSYNVA 152 (270)
T ss_pred CEEEEECChhhcCCC--------------------------------------------------------CCchHHHHH
Confidence 789999987544321 113569999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHH
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..+.+.+.+ ..++++++++|+.|.++.......... .....+..... ...++++++|
T Consensus 153 Kaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~~~~~~-------------~~~~~~~~vA 216 (270)
T PRK05650 153 KAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNP---AMKAQVGKLLE-------------KSPITAADIA 216 (270)
T ss_pred HHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCch---hHHHHHHHHhh-------------cCCCCHHHHH
Confidence 99866665443 357999999999998765432211111 01111111111 1247899999
Q ss_pred HHHHHHHH
Q 008324 310 NAMIVAMV 317 (570)
Q Consensus 310 ~aii~a~~ 317 (570)
++++.++.
T Consensus 217 ~~i~~~l~ 224 (270)
T PRK05650 217 DYIYQQVA 224 (270)
T ss_pred HHHHHHHh
Confidence 99998885
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=5.5e-13 Score=132.58 Aligned_cols=193 Identities=16% Similarity=0.134 Sum_probs=130.7
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+++||||||+||++++++|++.| .+|.++.|+.... +.+. ..++...+ ..++.++.
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g---~~v~~~~r~~~~~---~~~~---------~~~~~~~~-------~~~~~~~~ 59 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKG---RDLALCARRTDRL---EELK---------AELLARYP-------GIKVAVAA 59 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcC---CEEEEEeCCHHHH---HHHH---------HHHHhhCC-------CceEEEEE
Confidence 6899999999999999999999988 5788888864321 1111 11122111 24688899
Q ss_pred ccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---cCc
Q 008324 92 GDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKL 154 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~l 154 (570)
+|++++ +....+ ..++|+|||+||.... .+.++..+++|+.|+.++++.+... .+.
T Consensus 60 ~D~~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 132 (248)
T PRK08251 60 LDVNDH-------DQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGS 132 (248)
T ss_pred cCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 999954 222222 2468999999986532 1334566899999999998877532 256
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||........ +....|+.|
T Consensus 133 ~~iv~~sS~~~~~~~~-------------------------------------------------------~~~~~Y~~s 157 (248)
T PRK08251 133 GHLVLISSVSAVRGLP-------------------------------------------------------GVKAAYAAS 157 (248)
T ss_pred CeEEEEeccccccCCC-------------------------------------------------------CCcccHHHH
Confidence 7899999864322110 113569999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHH
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..+.+...+ ..++++++++|+.|.++.... .+. ....++.+++|
T Consensus 158 K~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~-------------------~~~----------~~~~~~~~~~a 208 (248)
T PRK08251 158 KAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAK-------------------AKS----------TPFMVDTETGV 208 (248)
T ss_pred HHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhc-------------------ccc----------CCccCCHHHHH
Confidence 99988887654 347899999999987653210 000 01247789999
Q ss_pred HHHHHHHH
Q 008324 310 NAMIVAMV 317 (570)
Q Consensus 310 ~aii~a~~ 317 (570)
++++.++.
T Consensus 209 ~~i~~~~~ 216 (248)
T PRK08251 209 KALVKAIE 216 (248)
T ss_pred HHHHHHHh
Confidence 99998875
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.9e-13 Score=133.76 Aligned_cols=218 Identities=12% Similarity=0.123 Sum_probs=134.5
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.++|++|+||||||+||+++++.|++.| .+|+++.|++... +.+.+ + -+..
T Consensus 4 ~~~~~~vlItGasggIG~~~a~~l~~~G---~~v~~~~r~~~~~---~~~~~-------------~----------~~~~ 54 (255)
T PRK06057 4 RLAGRVAVITGGGSGIGLATARRLAAEG---ATVVVGDIDPEAG---KAAAD-------------E----------VGGL 54 (255)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHcC---CEEEEEeCCHHHH---HHHHH-------------H----------cCCc
Confidence 3689999999999999999999999988 6778888864321 11110 0 0114
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCcc---------ccHHHHHHHhHHHHHHHHHHHHH-c
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKFD---------ERYDVAFGINTLGVIHLVNFAKK-C 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f~---------~~~~~~~~~Nv~gt~~ll~la~~-~ 151 (570)
.+.+|+++ ++..+.++ .++|+|||+||..... +.++..+++|+.|+..+++.+.. +
T Consensus 55 ~~~~D~~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 127 (255)
T PRK06057 55 FVPTDVTD-------EDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHM 127 (255)
T ss_pred EEEeeCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHH
Confidence 67899995 33333333 3589999999875321 23667789999999888776642 2
Q ss_pred --cCceEEEEEecce-eecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 008324 152 --VKLKVFVHVSTAY-VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (570)
Q Consensus 152 --~~l~~~V~vSTa~-v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
.+..++|++||.. +.+.. ...
T Consensus 128 ~~~~~g~iv~~sS~~~~~g~~--------------------------------------------------------~~~ 151 (255)
T PRK06057 128 VRQGKGSIINTASFVAVMGSA--------------------------------------------------------TSQ 151 (255)
T ss_pred HHhCCcEEEEEcchhhccCCC--------------------------------------------------------CCC
Confidence 1345788888853 22211 112
Q ss_pred chHHHHHHHHHHHHH----Hh-ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeee
Q 008324 229 NTYVFTKTMGEMLMQ----QS-KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~lv~----~~-~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+ ++ ..++.++++||+.|.++...+. +.. .+... .+... ..+ ...+.
T Consensus 152 ~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~--~~~---~~~~~----~~~~~-~~~-----~~~~~ 216 (255)
T PRK06057 152 ISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQEL--FAK---DPERA----ARRLV-HVP-----MGRFA 216 (255)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhh--ccC---CHHHH----HHHHh-cCC-----CCCCc
Confidence 469999976666554 33 4579999999999987643211 100 11110 00000 111 12467
Q ss_pred ehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.++++++++...+...... -.+..+.+.++
T Consensus 217 ~~~~~a~~~~~l~~~~~~~-~~g~~~~~~~g 246 (255)
T PRK06057 217 EPEEIAAAVAFLASDDASF-ITASTFLVDGG 246 (255)
T ss_pred CHHHHHHHHHHHhCccccC-ccCcEEEECCC
Confidence 8899999988766432221 12556666544
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.53 E-value=9.7e-13 Score=131.63 Aligned_cols=220 Identities=17% Similarity=0.170 Sum_probs=142.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+.+|+|+||||+|+||++++++|++.| .+|+++.|+... .+++.+++ +. . ..++..
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G---~~vv~~~r~~~~---~~~~~~~l---------~~-~--------~~~~~~ 64 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAG---ASVVVSDINADA---ANHVVDEI---------QQ-L--------GGQAFA 64 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEeCCHHH---HHHHHHHH---------Hh-c--------CCcEEE
Confidence 468999999999999999999999998 567777775432 22222111 10 0 246778
Q ss_pred EeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc---c---ccHHHHHHHhHHHHHHHHHHHHHc---cC
Q 008324 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF---D---ERYDVAFGINTLGVIHLVNFAKKC---VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f---~---~~~~~~~~~Nv~gt~~ll~la~~~---~~ 153 (570)
+.+|++++ +..+.+ ..++|+|||+||.... + +.++..+++|+.|+.++++.+... .+
T Consensus 65 ~~~D~~~~-------~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 137 (255)
T PRK06113 65 CRCDITSE-------QELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG 137 (255)
T ss_pred EEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC
Confidence 89999953 322222 2358999999997532 2 345666899999999999998631 13
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||....... .....|+.
T Consensus 138 ~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~ 161 (255)
T PRK06113 138 GGVILTITSMAAENKN--------------------------------------------------------INMTSYAS 161 (255)
T ss_pred CcEEEEEecccccCCC--------------------------------------------------------CCcchhHH
Confidence 3589999997532110 12357999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHH
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..+.+++.. ..++.+.++.|+.+..+.... .. . ........+.. ....+...+|+
T Consensus 162 sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~---~~----~-~~~~~~~~~~~---------~~~~~~~~~d~ 224 (255)
T PRK06113 162 SKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS---VI----T-PEIEQKMLQHT---------PIRRLGQPQDI 224 (255)
T ss_pred HHHHHHHHHHHHHHHhhhhCeEEEEEeccccccccccc---cc----C-HHHHHHHHhcC---------CCCCCcCHHHH
Confidence 999999998765 346899999999987653211 00 0 11111111111 01224577999
Q ss_pred HHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++++.++.... ..-.++++++.++
T Consensus 225 a~~~~~l~~~~~-~~~~G~~i~~~gg 249 (255)
T PRK06113 225 ANAALFLCSPAA-SWVSGQILTVSGG 249 (255)
T ss_pred HHHHHHHcCccc-cCccCCEEEECCC
Confidence 999998874221 1123678888776
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=3e-13 Score=135.90 Aligned_cols=220 Identities=15% Similarity=0.112 Sum_probs=140.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||||+||++++++|++.| .+|+++.|+... .+++.+ + ...++.+
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~-------------~--------~~~~~~~ 56 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAG---ARVAIVDIDADN---GAAVAA-------------S--------LGERARF 56 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHH-------------H--------hCCeeEE
Confidence 578999999999999999999999998 578888886432 111111 1 1246889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc------cccHHHHHHHhHHHHHHHHHHHHH-c-cCc
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF------DERYDVAFGINTLGVIHLVNFAKK-C-VKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f------~~~~~~~~~~Nv~gt~~ll~la~~-~-~~l 154 (570)
+.+|+++ ++..+.++ ..+|++||+|+.... .+.++..+++|+.|+..+++.+.. + ++-
T Consensus 57 ~~~Dl~~-------~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 129 (261)
T PRK08265 57 IATDITD-------DAAIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGG 129 (261)
T ss_pred EEecCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCC
Confidence 9999995 33233333 358999999996421 234667789999999999987764 2 233
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||........ ....|+.+
T Consensus 130 g~ii~isS~~~~~~~~--------------------------------------------------------~~~~Y~as 153 (261)
T PRK08265 130 GAIVNFTSISAKFAQT--------------------------------------------------------GRWLYPAS 153 (261)
T ss_pred cEEEEECchhhccCCC--------------------------------------------------------CCchhHHH
Confidence 5799999865332111 12469999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHH
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..+.+++.. ..++++..++|+.+.++..+.... + ........... ..+ ...+...+|+|
T Consensus 154 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~---~---~~~~~~~~~~~------~~p--~~r~~~p~dva 219 (261)
T PRK08265 154 KAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSG---G---DRAKADRVAAP------FHL--LGRVGDPEEVA 219 (261)
T ss_pred HHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcc---c---chhHHHHhhcc------cCC--CCCccCHHHHH
Confidence 99998888754 347999999999886653221110 0 00000001100 001 11245679999
Q ss_pred HHHHHHHHHhhCCCCCCceEEecCC
Q 008324 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++..++.... ..-.++++.+.++
T Consensus 220 ~~~~~l~s~~~-~~~tG~~i~vdgg 243 (261)
T PRK08265 220 QVVAFLCSDAA-SFVTGADYAVDGG 243 (261)
T ss_pred HHHHHHcCccc-cCccCcEEEECCC
Confidence 99998875322 2223667777665
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.3e-12 Score=130.57 Aligned_cols=221 Identities=14% Similarity=0.078 Sum_probs=143.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||+.++++|++.| .+|+++.|+... .+.+.++ +++. ..++.+
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G---~~v~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~ 64 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAG---AHVLVNGRNAAT---LEAAVAA---------LRAA---------GGAAEA 64 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcC---CeEEEEeCCHHH---HHHHHHH---------HHhc---------CCceEE
Confidence 679999999999999999999999988 678888886421 1111111 1110 246789
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~ 152 (570)
+.+|++++ +....++ ..+|+|||+|+.... .+.++..+++|+.|+..+.+.+.+ + .
T Consensus 65 ~~~Dl~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 137 (256)
T PRK06124 65 LAFDIADE-------EAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQ 137 (256)
T ss_pred EEccCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 99999953 3222332 357999999997532 134566789999999999977753 2 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 138 ~~~~iv~~ss~~~~~~~--------------------------------------------------------~~~~~Y~ 161 (256)
T PRK06124 138 GYGRIIAITSIAGQVAR--------------------------------------------------------AGDAVYP 161 (256)
T ss_pred CCcEEEEEeechhccCC--------------------------------------------------------CCccHhH
Confidence 56789999987533211 1135799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.+|+..+.+++.. ..++++..++|+.|.++.... +.. ...+........ ....++++++
T Consensus 162 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~---~~~----~~~~~~~~~~~~---------~~~~~~~~~~ 225 (256)
T PRK06124 162 AAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAA---MAA----DPAVGPWLAQRT---------PLGRWGRPEE 225 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhh---hcc----ChHHHHHHHhcC---------CCCCCCCHHH
Confidence 9999998887654 347999999999998865321 110 011111111110 1123688999
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++.+++.++..... .-.++.+.+.++
T Consensus 226 ~a~~~~~l~~~~~~-~~~G~~i~~dgg 251 (256)
T PRK06124 226 IAGAAVFLASPAAS-YVNGHVLAVDGG 251 (256)
T ss_pred HHHHHHHHcCcccC-CcCCCEEEECCC
Confidence 99999998753321 122555555544
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=9.4e-13 Score=133.45 Aligned_cols=227 Identities=15% Similarity=0.131 Sum_probs=141.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+++||||+|+||++++++|++.| .+|+++.|+... .+.+.++ +.. ...++.+
T Consensus 8 ~~~k~vlVtGas~giG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------~~~---------~~~~~~~ 63 (278)
T PRK08277 8 LKGKVAVITGGGGVLGGAMAKELARAG---AKVAILDRNQEK---AEAVVAE---------IKA---------AGGEALA 63 (278)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHh---------cCCeEEE
Confidence 578999999999999999999999988 578888886422 1111111 111 0246788
Q ss_pred EeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc----------------------cccHHHHHHHhHHH
Q 008324 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF----------------------DERYDVAFGINTLG 140 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f----------------------~~~~~~~~~~Nv~g 140 (570)
+.+|++++ +....+ ...+|+|||+||.... .+.++..+++|+.+
T Consensus 64 ~~~Dl~~~-------~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 136 (278)
T PRK08277 64 VKADVLDK-------ESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLG 136 (278)
T ss_pred EECCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHH
Confidence 99999953 222222 2468999999995321 13466778999999
Q ss_pred HHHHHHHHHH-c--cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhc
Q 008324 141 VIHLVNFAKK-C--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNL 217 (570)
Q Consensus 141 t~~ll~la~~-~--~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (570)
+..+++.+.+ + .+-.++|++||...+...
T Consensus 137 ~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~------------------------------------------------ 168 (278)
T PRK08277 137 TLLPTQVFAKDMVGRKGGNIINISSMNAFTPL------------------------------------------------ 168 (278)
T ss_pred HHHHHHHHHHHHHhcCCcEEEEEccchhcCCC------------------------------------------------
Confidence 9877765543 2 234689999987654321
Q ss_pred cccccccCCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceee
Q 008324 218 GTERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL 292 (570)
Q Consensus 218 g~~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~ 292 (570)
.....|+.||+..+.+++.+ ..++++..++|+.|.++..+......+.. ...........
T Consensus 169 --------~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~--~~~~~~~~~~~----- 233 (278)
T PRK08277 169 --------TKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGS--LTERANKILAH----- 233 (278)
T ss_pred --------CCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhcccccc--chhHHHHHhcc-----
Confidence 11246999999999988765 34799999999999887543211000000 00001111111
Q ss_pred ecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 293 VGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 293 ~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
....-+...+|+|++++.++.......-.+.+..+.+|
T Consensus 234 ----~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG 271 (278)
T PRK08277 234 ----TPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGG 271 (278)
T ss_pred ----CCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCC
Confidence 01123456799999999877531111122566766554
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.1e-13 Score=134.46 Aligned_cols=218 Identities=10% Similarity=0.047 Sum_probs=138.8
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|+||||||+||.+++++|++.| .+|+++.|+.... .+++.+++ +. ...++..+.
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G---~~V~~~~~~~~~~--~~~~~~~~---------~~---------~~~~~~~~~ 58 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQG---FDIGITWHSDEEG--AKETAEEV---------RS---------HGVRAEIRQ 58 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCChHH--HHHHHHHH---------Hh---------cCCceEEEE
Confidence 6899999999999999999999998 5677776643221 12222111 11 125688999
Q ss_pred ccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc--c--C
Q 008324 92 GDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--V--K 153 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~--~--~ 153 (570)
+|++++ +..+.++ ..+|+|||+||.... .+.++..+++|+.|+..+++++... + +
T Consensus 59 ~Dl~~~-------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~ 131 (256)
T PRK12743 59 LDLSDL-------PEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQ 131 (256)
T ss_pred ccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 999954 2222222 358999999997532 1346677899999999999987652 1 1
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
-.++|++||....... .....|+.
T Consensus 132 ~g~ii~isS~~~~~~~--------------------------------------------------------~~~~~Y~~ 155 (256)
T PRK12743 132 GGRIINITSVHEHTPL--------------------------------------------------------PGASAYTA 155 (256)
T ss_pred CeEEEEEeeccccCCC--------------------------------------------------------CCcchhHH
Confidence 2589999986322110 12347999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHH
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
+|+..+.+++.. ..+++++.++|+.+.++.....++ ........+. + .......+++
T Consensus 156 sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~---------~~~~~~~~~~----~-----~~~~~~~~dv 217 (256)
T PRK12743 156 AKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDS---------DVKPDSRPGI----P-----LGRPGDTHEI 217 (256)
T ss_pred HHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccCh---------HHHHHHHhcC----C-----CCCCCCHHHH
Confidence 999999888765 347999999999998864321110 0000111110 0 0113467999
Q ss_pred HHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++..++.... ..-.+.++.+.++
T Consensus 218 a~~~~~l~~~~~-~~~~G~~~~~dgg 242 (256)
T PRK12743 218 ASLVAWLCSEGA-SYTTGQSLIVDGG 242 (256)
T ss_pred HHHHHHHhCccc-cCcCCcEEEECCC
Confidence 999988774222 2223667777665
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=5.6e-13 Score=138.98 Aligned_cols=200 Identities=17% Similarity=0.231 Sum_probs=132.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++|+||||||+||++++++|++.| .+|+++.|+... .+.+.++ +++ . ..++..
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~G---~~Vvl~~R~~~~---l~~~~~~---------l~~-~--------g~~~~~ 61 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARRG---AKVVLLARGEEG---LEALAAE---------IRA-A--------GGEALA 61 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHH---------HHH-c--------CCcEEE
Confidence 578999999999999999999999998 678888886432 1111111 111 0 246788
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHHH-c--c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f~-------~~~~~~~~~Nv~gt~~ll~la~~-~--~ 152 (570)
+.+|++++ +..+.++ ..+|++||+|+...+. +.++..+++|+.|+.++.+.+.. + .
T Consensus 62 v~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~ 134 (334)
T PRK07109 62 VVADVADA-------EAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR 134 (334)
T ss_pred EEecCCCH-------HHHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 99999953 3333332 3689999999975321 34566788998887776655543 2 1
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+... +....|+
T Consensus 135 ~~g~iV~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 158 (334)
T PRK07109 135 DRGAIIQVGSALAYRSI--------------------------------------------------------PLQSAYC 158 (334)
T ss_pred CCcEEEEeCChhhccCC--------------------------------------------------------CcchHHH
Confidence 45689999998665321 1135699
Q ss_pred HHHHHHHHHHHHh-------ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 233 FTKTMGEMLMQQS-------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 233 ~sK~~aE~lv~~~-------~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
.||+..+.+.+.. ..++.+++++|+.|.++.. .|..+ .. + ........++..
T Consensus 159 asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~----~~~~~----------~~-~------~~~~~~~~~~~p 217 (334)
T PRK07109 159 AAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQF----DWARS----------RL-P------VEPQPVPPIYQP 217 (334)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchh----hhhhh----------hc-c------ccccCCCCCCCH
Confidence 9999888776543 1368999999999876422 11110 00 0 001112245688
Q ss_pred HHHHHHHHHHHH
Q 008324 306 DMVVNAMIVAMV 317 (570)
Q Consensus 306 Ddva~aii~a~~ 317 (570)
+++|++++.++.
T Consensus 218 e~vA~~i~~~~~ 229 (334)
T PRK07109 218 EVVADAILYAAE 229 (334)
T ss_pred HHHHHHHHHHHh
Confidence 999999999886
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=7.9e-13 Score=132.36 Aligned_cols=230 Identities=15% Similarity=0.192 Sum_probs=143.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|.||+.++++|++.| .+|+++.|+... .+.+. +.++...+ ..++.+
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~G---~~v~~~~r~~~~---~~~~~---------~~l~~~~~-------~~~~~~ 64 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGLG---ADVLIVARDADA---LAQAR---------DELAEEFP-------EREVHG 64 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHcC---CEEEEEeCCHHH---HHHHH---------HHHHhhCC-------CCeEEE
Confidence 579999999999999999999999998 577888886422 11211 11111111 247888
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--cCceEEEE
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--VKLKVFVH 159 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~l~~~V~ 159 (570)
+.+|+++++--....+........+|+|||+||.... .+.++..+.+|+.|+..+++.+.. + .+..++|+
T Consensus 65 ~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~ 144 (257)
T PRK09242 65 LAADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVN 144 (257)
T ss_pred EECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEE
Confidence 9999995321000000111123468999999996421 245677899999999999888753 2 24568999
Q ss_pred EecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHH
Q 008324 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (570)
Q Consensus 160 vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE 239 (570)
+||....... +....|+.||...+
T Consensus 145 ~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~ 168 (257)
T PRK09242 145 IGSVSGLTHV--------------------------------------------------------RSGAPYGMTKAALL 168 (257)
T ss_pred ECccccCCCC--------------------------------------------------------CCCcchHHHHHHHH
Confidence 9997554321 11356999999999
Q ss_pred HHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHH
Q 008324 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (570)
Q Consensus 240 ~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~ 314 (570)
.+++.. ..+++++.++|+.|.++...+ +..+ ............ ..-+...+++++++..
T Consensus 169 ~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~---~~~~----~~~~~~~~~~~~---------~~~~~~~~~va~~~~~ 232 (257)
T PRK09242 169 QMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSG---PLSD----PDYYEQVIERTP---------MRRVGEPEEVAAAVAF 232 (257)
T ss_pred HHHHHHHHHHHHhCeEEEEEEECCCCCccccc---ccCC----hHHHHHHHhcCC---------CCCCcCHHHHHHHHHH
Confidence 988754 357999999999998765422 2111 111111111110 1112346899999988
Q ss_pred HHHHhhCCCCCCceEEecCC
Q 008324 315 AMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 315 a~~~~~~~~~~~~iyni~s~ 334 (570)
++..... .-.++++++.++
T Consensus 233 l~~~~~~-~~~g~~i~~~gg 251 (257)
T PRK09242 233 LCMPAAS-YITGQCIAVDGG 251 (257)
T ss_pred HhCcccc-cccCCEEEECCC
Confidence 7742211 113566666544
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.7e-12 Score=129.51 Aligned_cols=221 Identities=13% Similarity=0.155 Sum_probs=141.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||+|+||.+++++|++.| .+|+++.|+... .+.+.++ +.+. ..++..
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~G---~~Vi~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~ 61 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQG---AHVIVSSRKLDG---CQAVADA---------IVAA---------GGKAEA 61 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHhc---------CCeEEE
Confidence 568999999999999999999999998 578888886432 1222211 1110 235678
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHHc---
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f--------~~~~~~~~~~Nv~gt~~ll~la~~~--- 151 (570)
+.+|++++ +..+.++ ..+|+|||+||.... .+.++..+++|+.|+..+++.+...
T Consensus 62 ~~~D~~~~-------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 134 (252)
T PRK07035 62 LACHIGEM-------EQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKE 134 (252)
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 89999953 2222222 358999999986421 1335667899999999888776432
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||.+..... +....|
T Consensus 135 ~~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y 158 (252)
T PRK07035 135 QGGGSIVNVASVNGVSPG--------------------------------------------------------DFQGIY 158 (252)
T ss_pred CCCcEEEEECchhhcCCC--------------------------------------------------------CCCcch
Confidence 245689999986432211 123569
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..|.+++.+ ..++++..+.|+.|..+..+. +..+ ........... + ...+...+
T Consensus 159 ~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~---~~~~----~~~~~~~~~~~----~-----~~~~~~~~ 222 (252)
T PRK07035 159 SITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASA---LFKN----DAILKQALAHI----P-----LRRHAEPS 222 (252)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCccccc---ccCC----HHHHHHHHccC----C-----CCCcCCHH
Confidence 99999999998866 347999999999987654321 1111 11111111111 0 11245678
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++|++++..+..... ...++++.+.++
T Consensus 223 ~va~~~~~l~~~~~~-~~~g~~~~~dgg 249 (252)
T PRK07035 223 EMAGAVLYLASDASS-YTTGECLNVDGG 249 (252)
T ss_pred HHHHHHHHHhCcccc-CccCCEEEeCCC
Confidence 999999987753322 223667777654
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=9.9e-13 Score=131.73 Aligned_cols=226 Identities=17% Similarity=0.191 Sum_probs=145.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||+.++++|++.|. ..|+++.|+.... +... +.++. ...++..
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~--~~V~~~~r~~~~~---~~~~---------~~l~~---------~~~~~~~ 60 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGA--AGLVICGRNAEKG---EAQA---------AELEA---------LGAKAVF 60 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCC--CeEEEEcCCHHHH---HHHH---------HHHHh---------cCCeEEE
Confidence 6789999999999999999999999883 2388888864321 1111 11111 0246778
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc-c--
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-V-- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~-~-- 152 (570)
+.+|++++ +....++ .++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .
T Consensus 61 ~~~D~~~~-------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 133 (260)
T PRK06198 61 VQADLSDV-------EDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRR 133 (260)
T ss_pred EEccCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 89999953 3233332 358999999997531 2334667899999999998887542 1
Q ss_pred -CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 153 -KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 153 -~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
...++|++||...++... ..+.|
T Consensus 134 ~~~g~iv~~ss~~~~~~~~--------------------------------------------------------~~~~Y 157 (260)
T PRK06198 134 KAEGTIVNIGSMSAHGGQP--------------------------------------------------------FLAAY 157 (260)
T ss_pred CCCCEEEEECCcccccCCC--------------------------------------------------------Ccchh
Confidence 134799999876554221 13579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCc-cchHHHHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDL-KTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~-~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
+.+|...|.+.+.. ..+++++.++|+.+.++...... ..+ .....++.....+ .....++++
T Consensus 158 ~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~---~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 225 (260)
T PRK06198 158 CASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQ---REFHGAPDDWLEKAAAT---------QPFGRLLDP 225 (260)
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhh---hhccCCChHHHHHHhcc---------CCccCCcCH
Confidence 99999999988754 34689999999999886531100 000 0111112111111 112345789
Q ss_pred HHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++++++..++.... ....++++.+.++
T Consensus 226 ~~~a~~~~~l~~~~~-~~~~G~~~~~~~~ 253 (260)
T PRK06198 226 DEVARAVAFLLSDES-GLMTGSVIDFDQS 253 (260)
T ss_pred HHHHHHHHHHcChhh-CCccCceEeECCc
Confidence 999999998775332 2223678888776
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=6.9e-13 Score=132.39 Aligned_cols=222 Identities=16% Similarity=0.137 Sum_probs=141.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.| .+|+++.|+.+.. +++.+++ .+ ...++..
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~G---~~v~~~~r~~~~~---~~~~~~~---------~~---------~~~~~~~ 60 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFAREG---AKVVVADRDAAGG---EETVALI---------RE---------AGGEALF 60 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcC---CEEEEEeCCHHHH---HHHHHHH---------Hh---------cCCceEE
Confidence 578999999999999999999999988 5788888875421 1211111 11 0256889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHH-c--
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKK-C-- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~----f----~~~~~~~~~~Nv~gt~~ll~la~~-~-- 151 (570)
+.+|++++ +..+.++ ..+|+|||+|+... + .+.++..+++|+.++..+++.+.. +
T Consensus 61 ~~~D~~~~-------~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 133 (253)
T PRK06172 61 VACDVTRD-------AEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLA 133 (253)
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 99999953 3233332 35799999998642 2 134566788999999887665432 1
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||....... +....|
T Consensus 134 ~~~~~ii~~sS~~~~~~~--------------------------------------------------------~~~~~Y 157 (253)
T PRK06172 134 QGGGAIVNTASVAGLGAA--------------------------------------------------------PKMSIY 157 (253)
T ss_pred cCCcEEEEECchhhccCC--------------------------------------------------------CCCchh
Confidence 244689999987544321 113569
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..|.+.+.. ..++++..+.|+.|-++..++... ......... .... ....+...+
T Consensus 158 ~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~------~~~~~~~~~-~~~~--------~~~~~~~p~ 222 (253)
T PRK06172 158 AASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYE------ADPRKAEFA-AAMH--------PVGRIGKVE 222 (253)
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcc------cChHHHHHH-hccC--------CCCCccCHH
Confidence 99999998888765 347999999999987765432211 001111111 1100 011245679
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++.++.++..... .-.+++.++.++
T Consensus 223 ~ia~~~~~l~~~~~~-~~~G~~i~~dgg 249 (253)
T PRK06172 223 EVASAVLYLCSDGAS-FTTGHALMVDGG 249 (253)
T ss_pred HHHHHHHHHhCcccc-CcCCcEEEECCC
Confidence 999998887753322 223667777665
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=4.5e-13 Score=133.94 Aligned_cols=168 Identities=15% Similarity=0.202 Sum_probs=119.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||+++++.|++.| .+|+++.|+.... +.+. +.++.. ..++..
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G---~~Vi~~~r~~~~~---~~~~---------~~l~~~---------~~~~~~ 62 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAG---AKVVLASRRVERL---KELR---------AEIEAE---------GGAAHV 62 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHH---------HHHHhc---------CCcEEE
Confidence 678999999999999999999999988 5788888864321 1111 111111 246788
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~ 152 (570)
+.+|++++ +..+.++ ..+|+|||+|+.... .+.++..+++|+.|+..+++.+.. + .
T Consensus 63 ~~~D~~~~-------~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 135 (258)
T PRK06949 63 VSLDVTDY-------QSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIAR 135 (258)
T ss_pred EEecCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc
Confidence 99999953 2233333 358999999996432 134667789999999999887753 1 0
Q ss_pred C--------ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhcccccccc
Q 008324 153 K--------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKL 224 (570)
Q Consensus 153 ~--------l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 224 (570)
. -.++|++||.......
T Consensus 136 ~~~~~~~~~~g~iv~~sS~~~~~~~------------------------------------------------------- 160 (258)
T PRK06949 136 AKGAGNTKPGGRIINIASVAGLRVL------------------------------------------------------- 160 (258)
T ss_pred CCcCCCCCCCeEEEEECcccccCCC-------------------------------------------------------
Confidence 1 2589999987543211
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCC
Q 008324 225 HGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYK 264 (570)
Q Consensus 225 ~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ 264 (570)
+..+.|+.+|+..|.+++.+ ..++++++++|+.|.++..
T Consensus 161 -~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~ 204 (258)
T PRK06949 161 -PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEIN 204 (258)
T ss_pred -CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcc
Confidence 12357999999999988765 3479999999999988654
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=4.2e-13 Score=134.56 Aligned_cols=162 Identities=15% Similarity=0.085 Sum_probs=115.7
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+++||||||+||++++++|++.| .+|+++.|+.... +.+.. ..+ ..++.++.+
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~-------------~~~-------~~~~~~~~~ 55 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEG---WRVGAYDINEAGL---AALAA-------------ELG-------AGNAWTGAL 55 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeCCHHHH---HHHHH-------------Hhc-------CCceEEEEe
Confidence 689999999999999999999998 6788888865321 11111 100 246889999
Q ss_pred cCCCCCCCCCchhhHHHH--------hCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--cCc
Q 008324 93 DISSEDLGLKDSNLKEEL--------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--VKL 154 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l--------~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~l 154 (570)
|++++ +....+ ..++|+|||+||.... .+.++..+++|+.|+.++++++.. + .+.
T Consensus 56 D~~~~-------~~v~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 128 (260)
T PRK08267 56 DVTDR-------AAWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPG 128 (260)
T ss_pred cCCCH-------HHHHHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC
Confidence 99953 322232 2357999999997532 134667799999999999988754 1 245
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||....... .....|+.|
T Consensus 129 ~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~s 152 (260)
T PRK08267 129 ARVINTSSASAIYGQ--------------------------------------------------------PGLAVYSAT 152 (260)
T ss_pred CEEEEeCchhhCcCC--------------------------------------------------------CCchhhHHH
Confidence 689999986443211 113569999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceecCC
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~ 263 (570)
|+..+.+.... ..++++++++|+.+.+..
T Consensus 153 Kaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~ 186 (260)
T PRK08267 153 KFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAM 186 (260)
T ss_pred HHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcc
Confidence 99998887765 347999999999987653
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.1e-12 Score=129.41 Aligned_cols=214 Identities=18% Similarity=0.165 Sum_probs=136.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++|++|+||||||+||+++++.|++.| .+|+++.|+.... +++..++ . . ..++..
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------~----~------~~~~~~ 57 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKEG---AQVCINSRNENKL---KRMKKTL---------S----K------YGNIHY 57 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------H----h------cCCeEE
Confidence 468999999999999999999999988 5788888864321 1221110 0 0 136788
Q ss_pred EeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCcc-----ccHHHHHHHhHHHHHHHHHHHHHc-cCceE
Q 008324 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKFD-----ERYDVAFGINTLGVIHLVNFAKKC-VKLKV 156 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f~-----~~~~~~~~~Nv~gt~~ll~la~~~-~~l~~ 156 (570)
+.+|++++ +..+.+ ...+|.+||+|+..... +.++..+++|+.++.++++.+..+ .+-.+
T Consensus 58 ~~~Dl~~~-------~~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 130 (238)
T PRK05786 58 VVGDVSST-------ESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSS 130 (238)
T ss_pred EECCCCCH-------HHHHHHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCE
Confidence 99999954 222222 24579999999854321 334566889999998888877663 22357
Q ss_pred EEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHH
Q 008324 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (570)
Q Consensus 157 ~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+|++||....... . +....|+.||+
T Consensus 131 iv~~ss~~~~~~~--------~-----------------------------------------------~~~~~Y~~sK~ 155 (238)
T PRK05786 131 IVLVSSMSGIYKA--------S-----------------------------------------------PDQLSYAVAKA 155 (238)
T ss_pred EEEEecchhcccC--------C-----------------------------------------------CCchHHHHHHH
Confidence 8888886421100 0 11246999999
Q ss_pred HHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHH
Q 008324 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (570)
Q Consensus 237 ~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~a 311 (570)
..+.+++.. ..+++++++||+.|+++.. +-..|. . ... .....++.++++++
T Consensus 156 ~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~-~~~~~~---------------~-~~~------~~~~~~~~~~va~~ 212 (238)
T PRK05786 156 GLAKAVEILASELLGRGIRVNGIAPTTISGDFE-PERNWK---------------K-LRK------LGDDMAPPEDFAKV 212 (238)
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEecCccCCCCC-chhhhh---------------h-hcc------ccCCCCCHHHHHHH
Confidence 888777654 3589999999999998642 100110 0 000 01135788999999
Q ss_pred HHHHHHHhhCCCCCCceEEecCC
Q 008324 312 MIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++.++.... ....+..+.+.++
T Consensus 213 ~~~~~~~~~-~~~~g~~~~~~~~ 234 (238)
T PRK05786 213 IIWLLTDEA-DWVDGVVIPVDGG 234 (238)
T ss_pred HHHHhcccc-cCccCCEEEECCc
Confidence 998885322 2223566666443
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.1e-12 Score=128.85 Aligned_cols=213 Identities=15% Similarity=0.078 Sum_probs=137.8
Q ss_pred EEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccCC
Q 008324 16 LVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDIS 95 (570)
Q Consensus 16 lITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl~ 95 (570)
+||||||+||++++++|++.| .+|+++.|+... .+.+..+ +++ ..++.++.+|++
T Consensus 1 lItGas~~iG~~~a~~l~~~G---~~v~~~~r~~~~---~~~~~~~---------~~~----------~~~~~~~~~Dl~ 55 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEG---ARVTIASRSRDR---LAAAARA---------LGG----------GAPVRTAALDIT 55 (230)
T ss_pred CeecCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------Hhc----------CCceEEEEccCC
Confidence 699999999999999999998 578888886421 1111100 110 246788999999
Q ss_pred CCCCCCCchhhHHHHhC---CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEeccee
Q 008324 96 SEDLGLKDSNLKEELWN---ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (570)
Q Consensus 96 ~~~lgls~~~~~~~l~~---~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v 165 (570)
+ .+....+++ .+|++||+|+.... .+.++..+++|+.|+.+++++.. +.+..++|++||...
T Consensus 56 ~-------~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~g~iv~~ss~~~ 127 (230)
T PRK07041 56 D-------EAAVDAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAAR-IAPGGSLTFVSGFAA 127 (230)
T ss_pred C-------HHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhh-hcCCeEEEEECchhh
Confidence 5 333445544 48999999986432 13466778999999999999544 446689999998865
Q ss_pred ecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008324 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (570)
Q Consensus 166 ~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (570)
+... +..+.|+.+|+..|.+++..
T Consensus 128 ~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~~~~~l 151 (230)
T PRK07041 128 VRPS--------------------------------------------------------ASGVLQGAINAALEALARGL 151 (230)
T ss_pred cCCC--------------------------------------------------------CcchHHHHHHHHHHHHHHHH
Confidence 4321 12357999999999998775
Q ss_pred c---cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCC
Q 008324 246 K---ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQ 322 (570)
Q Consensus 246 ~---~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~ 322 (570)
. .+++++.++|+.+-++.....+ .. ....++........ .. .....+|+|+++..++.. .
T Consensus 152 a~e~~~irv~~i~pg~~~t~~~~~~~---~~--~~~~~~~~~~~~~~----~~-----~~~~~~dva~~~~~l~~~---~ 214 (230)
T PRK07041 152 ALELAPVRVNTVSPGLVDTPLWSKLA---GD--AREAMFAAAAERLP----AR-----RVGQPEDVANAILFLAAN---G 214 (230)
T ss_pred HHHhhCceEEEEeecccccHHHHhhh---cc--chHHHHHHHHhcCC----CC-----CCcCHHHHHHHHHHHhcC---C
Confidence 2 3578899999887654321110 00 01111211111111 00 123568999999988752 1
Q ss_pred CCCCceEEecCC
Q 008324 323 PSDANIYHVGSS 334 (570)
Q Consensus 323 ~~~~~iyni~s~ 334 (570)
...+++|++.++
T Consensus 215 ~~~G~~~~v~gg 226 (230)
T PRK07041 215 FTTGSTVLVDGG 226 (230)
T ss_pred CcCCcEEEeCCC
Confidence 223678998876
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=6.9e-13 Score=131.95 Aligned_cols=173 Identities=18% Similarity=0.172 Sum_probs=117.6
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
.+..+||+|+||||+|+||..++++|++.| .+|+++.|+... .+++.+ .+++.. ..+
T Consensus 7 ~~~~~~k~vlItG~~g~iG~~la~~l~~~G---~~Vi~~~r~~~~---~~~~~~---------~l~~~~--------~~~ 63 (247)
T PRK08945 7 PDLLKDRIILVTGAGDGIGREAALTYARHG---ATVILLGRTEEK---LEAVYD---------EIEAAG--------GPQ 63 (247)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCC---CcEEEEeCCHHH---HHHHHH---------HHHhcC--------CCC
Confidence 356789999999999999999999999988 577888886422 122221 111110 245
Q ss_pred eEEEeccCCCCCCCCCchh------hHHHHhCCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHHc-
Q 008324 87 ITFVPGDISSEDLGLKDSN------LKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC- 151 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~------~~~~l~~~vdiViH~AA~v~f--------~~~~~~~~~~Nv~gt~~ll~la~~~- 151 (570)
+.++.+|++.-+ ..+ ........+|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 64 ~~~~~~d~~~~~----~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l 139 (247)
T PRK08945 64 PAIIPLDLLTAT----PQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLL 139 (247)
T ss_pred ceEEEecccCCC----HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 667788886311 111 111223468999999987422 1446778999999999998877531
Q ss_pred --cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc
Q 008324 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (570)
Q Consensus 152 --~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
.+..+||++||....... ....
T Consensus 140 ~~~~~~~iv~~ss~~~~~~~--------------------------------------------------------~~~~ 163 (247)
T PRK08945 140 LKSPAASLVFTSSSVGRQGR--------------------------------------------------------ANWG 163 (247)
T ss_pred HhCCCCEEEEEccHhhcCCC--------------------------------------------------------CCCc
Confidence 256789999986432111 1124
Q ss_pred hHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecC
Q 008324 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGT 262 (570)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
.|+.||+..|.+++.+ ..++++++++|+.+-++
T Consensus 164 ~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~ 201 (247)
T PRK08945 164 AYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTA 201 (247)
T ss_pred ccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCc
Confidence 6999999999988765 34688999999988664
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.9e-13 Score=137.05 Aligned_cols=182 Identities=14% Similarity=0.100 Sum_probs=115.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+..... ... +.+.+..+ ..++.+
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~G---~~vi~~~r~~~~~~---~~~---------~~l~~~~~-------~~~~~~ 71 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAKG---AHVVLAVRNLDKGK---AAA---------ARITAATP-------GADVTL 71 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCC---CEEEEEeCCHHHHH---HHH---------HHHHHhCC-------CCceEE
Confidence 478999999999999999999999998 57888888643211 111 11111111 246788
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-----cccHHHHHHHhHHH----HHHHHHHHHHccC
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-----DERYDVAFGINTLG----VIHLVNFAKKCVK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-----~~~~~~~~~~Nv~g----t~~ll~la~~~~~ 153 (570)
+.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.| +..++..+++. +
T Consensus 72 ~~~Dl~d~-------~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~ 143 (306)
T PRK06197 72 QELDLTSL-------ASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV-P 143 (306)
T ss_pred EECCCCCH-------HHHHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC-C
Confidence 99999953 3233332 358999999997532 24456778999999 55566665553 4
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||...........++.... . .......|+.
T Consensus 144 ~~~iV~vSS~~~~~~~~~~~~~~~~~--~-----------------------------------------~~~~~~~Y~~ 180 (306)
T PRK06197 144 GSRVVTVSSGGHRIRAAIHFDDLQWE--R-----------------------------------------RYNRVAAYGQ 180 (306)
T ss_pred CCEEEEECCHHHhccCCCCccccCcc--c-----------------------------------------CCCcHHHHHH
Confidence 56999999975432111000100000 0 0022357999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEE--EecCceecCCC
Q 008324 234 TKTMGEMLMQQS-----KENLSLVI--IRPTVVSGTYK 264 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~I--vRPsiV~g~~~ 264 (570)
||+..+.+.+.+ ..++++.+ +.||.|..+..
T Consensus 181 SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~ 218 (306)
T PRK06197 181 SKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELA 218 (306)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCccc
Confidence 999999888765 23555544 47998877644
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=6.1e-13 Score=134.58 Aligned_cols=158 Identities=13% Similarity=0.186 Sum_probs=113.1
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+++||||||+||+++++.|++.| .+|+++.|+.... +.+. ..++.++.+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~------------------------~~~~~~~~~ 51 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAG---YEVWATARKAEDV---EALA------------------------AAGFTAVQL 51 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHH------------------------HCCCeEEEe
Confidence 689999999999999999999988 6788888864221 1111 134668899
Q ss_pred cCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc--cCceE
Q 008324 93 DISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--VKLKV 156 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~--~~l~~ 156 (570)
|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+... ++..+
T Consensus 52 Dl~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~ 124 (274)
T PRK05693 52 DVNDG-------AALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGL 124 (274)
T ss_pred eCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCE
Confidence 99953 3222332 468999999996532 1346677899999999998887542 23357
Q ss_pred EEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHH
Q 008324 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (570)
Q Consensus 157 ~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+|.+||....... +....|+.||+
T Consensus 125 iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~ 148 (274)
T PRK05693 125 VVNIGSVSGVLVT--------------------------------------------------------PFAGAYCASKA 148 (274)
T ss_pred EEEECCccccCCC--------------------------------------------------------CCccHHHHHHH
Confidence 8888886532211 12356999999
Q ss_pred HHHHHHHHh-----ccCCcEEEEecCceecCC
Q 008324 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (570)
Q Consensus 237 ~aE~lv~~~-----~~~lp~~IvRPsiV~g~~ 263 (570)
..|.+.+.+ ..++++++++|+.|.++.
T Consensus 149 al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~ 180 (274)
T PRK05693 149 AVHALSDALRLELAPFGVQVMEVQPGAIASQF 180 (274)
T ss_pred HHHHHHHHHHHHhhhhCeEEEEEecCcccccc
Confidence 988887654 358999999999997754
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.3e-12 Score=130.56 Aligned_cols=219 Identities=14% Similarity=0.153 Sum_probs=139.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||||.||++++++|++.| .+|+++.|+.. +...++ +.+ ...++.+
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G---~~vv~~~~~~~-----~~~~~~---------~~~---------~~~~~~~ 59 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAG---ADIVGVGVAEA-----PETQAQ---------VEA---------LGRKFHF 59 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEecCchH-----HHHHHH---------HHH---------cCCeEEE
Confidence 579999999999999999999999999 56777766432 111111 100 1256888
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-cc--
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-CV-- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~~-- 152 (570)
+.+|++++ +..+.++ ..+|++||+||.... .+.++..+++|+.|+..+.+.+.. +.
T Consensus 60 ~~~Dl~~~-------~~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~ 132 (251)
T PRK12481 60 ITADLIQQ-------KDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQ 132 (251)
T ss_pred EEeCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHc
Confidence 99999953 3333333 358999999997532 245677889999999999887754 21
Q ss_pred C-ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 153 K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 153 ~-l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+ -.++|++||...+.... ....|
T Consensus 133 ~~~g~ii~isS~~~~~~~~--------------------------------------------------------~~~~Y 156 (251)
T PRK12481 133 GNGGKIINIASMLSFQGGI--------------------------------------------------------RVPSY 156 (251)
T ss_pred CCCCEEEEeCChhhcCCCC--------------------------------------------------------CCcch
Confidence 2 35899999976543211 12369
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+++.. ..++++..++||.|-.+...... .. ......... ..+. ..+...+
T Consensus 157 ~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~---~~----~~~~~~~~~----~~p~-----~~~~~pe 220 (251)
T PRK12481 157 TASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALR---AD----TARNEAILE----RIPA-----SRWGTPD 220 (251)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcc---cC----hHHHHHHHh----cCCC-----CCCcCHH
Confidence 99999999888754 35899999999998765322111 00 000011111 1111 1245679
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++++..++...... -.+++..+.++
T Consensus 221 eva~~~~~L~s~~~~~-~~G~~i~vdgg 247 (251)
T PRK12481 221 DLAGPAIFLSSSASDY-VTGYTLAVDGG 247 (251)
T ss_pred HHHHHHHHHhCccccC-cCCceEEECCC
Confidence 9999999887532221 22556655443
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.6e-12 Score=131.60 Aligned_cols=170 Identities=14% Similarity=0.184 Sum_probs=114.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccH-HHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA-ALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~-~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
++||+++||||||+||+++++.|++.| .+|+++.|+...... ...++ + .-+.++.. ..++.
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~l~-~-----~~~~~~~~---------~~~~~ 65 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARDG---ANIVIAAKTAEPHPKLPGTIH-T-----AAEEIEAA---------GGQAL 65 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEecccccccchhhHHH-H-----HHHHHHhc---------CCceE
Confidence 578999999999999999999999988 578888887643211 11111 0 01111111 24688
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc---c----ccHHHHHHHhHHHHHHHHHHHHHc---
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF---D----ERYDVAFGINTLGVIHLVNFAKKC--- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f---~----~~~~~~~~~Nv~gt~~ll~la~~~--- 151 (570)
++.+|++++ +....++ .++|+|||+||.... . +.++..+++|+.|+.++++++...
T Consensus 66 ~~~~D~~~~-------~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~ 138 (273)
T PRK08278 66 PLVGDVRDE-------DQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKK 138 (273)
T ss_pred EEEecCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHh
Confidence 899999953 3232332 368999999997532 1 335667889999999999999752
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.++|++||.... .. . + .+....|
T Consensus 139 ~~~g~iv~iss~~~~--~~-----~-~----------------------------------------------~~~~~~Y 164 (273)
T PRK08278 139 SENPHILTLSPPLNL--DP-----K-W----------------------------------------------FAPHTAY 164 (273)
T ss_pred cCCCEEEEECCchhc--cc-----c-c----------------------------------------------cCCcchh
Confidence 122467777764211 00 0 0 0123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCc
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTV 258 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsi 258 (570)
+.||+..|.+++.+ ..++.++.+.|+.
T Consensus 165 ~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~ 196 (273)
T PRK08278 165 TMAKYGMSLCTLGLAEEFRDDGIAVNALWPRT 196 (273)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCC
Confidence 99999999998865 3478999999983
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.7e-12 Score=129.23 Aligned_cols=227 Identities=12% Similarity=0.068 Sum_probs=142.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+++||||+|+||++++++|++.| .+|+++.|+.... +++.+ .++.. ..++..
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~G---~~vv~~~~~~~~~---~~~~~---------~~~~~---------~~~~~~ 63 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKAG---ATIVFNDINQELV---DKGLA---------AYREL---------GIEAHG 63 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeCCHHHH---HHHHH---------HHHhc---------CCceEE
Confidence 468999999999999999999999988 5677777764321 11111 11110 246888
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~ 152 (570)
+.+|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.|+..+.+.+.. + .
T Consensus 64 ~~~Dl~~-------~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 136 (265)
T PRK07097 64 YVCDVTD-------EDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKK 136 (265)
T ss_pred EEcCCCC-------HHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Confidence 9999995 33333333 348999999997532 234566788999999988877654 2 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... +....|+
T Consensus 137 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 160 (265)
T PRK07097 137 GHGKIINICSMMSELGR--------------------------------------------------------ETVSAYA 160 (265)
T ss_pred CCcEEEEEcCccccCCC--------------------------------------------------------CCCccHH
Confidence 45689999986432111 1135699
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+++.+ ..++.++.++||.|.++...+...-... ............. . + ...+...+|
T Consensus 161 ~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~-~------~--~~~~~~~~d 230 (265)
T PRK07097 161 AAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQAD-GSRHPFDQFIIAK-T------P--AARWGDPED 230 (265)
T ss_pred HHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhcccc-ccchhHHHHHHhc-C------C--ccCCcCHHH
Confidence 9999999998765 3479999999999988754332110000 0000000000000 0 0 112456789
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++++.++.... ..-.++++.+.++
T Consensus 231 va~~~~~l~~~~~-~~~~g~~~~~~gg 256 (265)
T PRK07097 231 LAGPAVFLASDAS-NFVNGHILYVDGG 256 (265)
T ss_pred HHHHHHHHhCccc-CCCCCCEEEECCC
Confidence 9999998875322 2223567777665
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.5e-12 Score=129.24 Aligned_cols=196 Identities=15% Similarity=0.209 Sum_probs=130.1
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++++|+||||+|+||+.++++|++.| .+|+++.|+.... +.+.++ + +. ..++.++
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~---------~--~~--------~~~~~~~ 58 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAG---ARLLLVGRNAEKL---EALAAR---------L--PY--------PGRHRWV 58 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHH---------H--hc--------CCceEEE
Confidence 68999999999999999999999998 6788888864221 111111 1 00 2578899
Q ss_pred eccCCCCCCCCCchhhHHHH------hCCccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHHHc---cCc
Q 008324 91 PGDISSEDLGLKDSNLKEEL------WNELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAKKC---VKL 154 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l------~~~vdiViH~AA~v~f~-------~~~~~~~~~Nv~gt~~ll~la~~~---~~l 154 (570)
.+|++++ +..+.+ ...+|+|||+||...+. +.++..+++|+.|+.++++.+... .+.
T Consensus 59 ~~D~~d~-------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~ 131 (263)
T PRK09072 59 VADLTSE-------AGREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPS 131 (263)
T ss_pred EccCCCH-------HHHHHHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC
Confidence 9999953 222222 24689999999976431 335667889999999999888642 234
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||....... .....|+.|
T Consensus 132 ~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~s 155 (263)
T PRK09072 132 AMVVNVGSTFGSIGY--------------------------------------------------------PGYASYCAS 155 (263)
T ss_pred CEEEEecChhhCcCC--------------------------------------------------------CCccHHHHH
Confidence 578888886432211 112469999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHH
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..+.+++.. ..++.++.+.|+.+.++...+...+. .. .+ ......++++|
T Consensus 156 K~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~--------------~~---~~------~~~~~~~~~va 212 (263)
T PRK09072 156 KFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQAL--------------NR---AL------GNAMDDPEDVA 212 (263)
T ss_pred HHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhcccc--------------cc---cc------cCCCCCHHHHH
Confidence 99877776544 34788999999988654321100000 00 00 01356789999
Q ss_pred HHHHHHHH
Q 008324 310 NAMIVAMV 317 (570)
Q Consensus 310 ~aii~a~~ 317 (570)
++++.++.
T Consensus 213 ~~i~~~~~ 220 (263)
T PRK09072 213 AAVLQAIE 220 (263)
T ss_pred HHHHHHHh
Confidence 99998886
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.3e-12 Score=131.58 Aligned_cols=222 Identities=14% Similarity=0.110 Sum_probs=139.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||+|+||.+++++|++.| .+|+++.|+.... +.+.++ +.+. ..++.+
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~~---------~~~~---------~~~~~~ 62 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAG---ANVAVASRSQEKV---DAAVAQ---------LQQA---------GPEGLG 62 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHH---------HHHh---------CCceEE
Confidence 679999999999999999999999988 6788888874321 111111 1110 245678
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc-c-C
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-V-K 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~-~-~ 153 (570)
+.+|+++ ++..+.++ ..+|+|||+|+.... .+.++..+++|+.|+.++++.+... . +
T Consensus 63 ~~~Dv~~-------~~~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~ 135 (264)
T PRK07576 63 VSADVRD-------YAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP 135 (264)
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 8999995 33233333 357999999985321 2345667889999999999888652 1 2
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
-.++|++||....... +....|+.
T Consensus 136 ~g~iv~iss~~~~~~~--------------------------------------------------------~~~~~Y~a 159 (264)
T PRK07576 136 GASIIQISAPQAFVPM--------------------------------------------------------PMQAHVCA 159 (264)
T ss_pred CCEEEEECChhhccCC--------------------------------------------------------CCccHHHH
Confidence 2589999986433211 11256999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHH
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..|.+++.. ..+++++.++|+.+.++.. ...+... ......... .. ......+..|+
T Consensus 160 sK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~--~~~~~~~-----~~~~~~~~~---~~-----~~~~~~~~~dv 224 (264)
T PRK07576 160 AKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEG--MARLAPS-----PELQAAVAQ---SV-----PLKRNGTKQDI 224 (264)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHH--HhhcccC-----HHHHHHHHh---cC-----CCCCCCCHHHH
Confidence 999999998865 3578999999998865321 1111111 001100000 01 11234677999
Q ss_pred HHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|++++.++..... .-.+....+.++
T Consensus 225 a~~~~~l~~~~~~-~~~G~~~~~~gg 249 (264)
T PRK07576 225 ANAALFLASDMAS-YITGVVLPVDGG 249 (264)
T ss_pred HHHHHHHcChhhc-CccCCEEEECCC
Confidence 9999988753221 112455555554
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.9e-12 Score=133.41 Aligned_cols=218 Identities=20% Similarity=0.180 Sum_probs=137.3
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
--++||+++||||+|+||++++++|++.| .+|++..|.... ..+.+.++ ++.. ..++
T Consensus 8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~G---a~Vv~~~~~~~~--~~~~~~~~---------i~~~---------g~~~ 64 (306)
T PRK07792 8 TDLSGKVAVVTGAAAGLGRAEALGLARLG---ATVVVNDVASAL--DASDVLDE---------IRAA---------GAKA 64 (306)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEecCCchh--HHHHHHHH---------HHhc---------CCeE
Confidence 34789999999999999999999999998 567777664321 11121111 1110 2568
Q ss_pred EEEeccCCCCCCCCCchhhHHHHh------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc-c-
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELW------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-V- 152 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~-~- 152 (570)
..+.+|++++ +..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 65 ~~~~~Dv~d~-------~~~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~ 137 (306)
T PRK07792 65 VAVAGDISQR-------ATADELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRA 137 (306)
T ss_pred EEEeCCCCCH-------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 8899999953 2233333 468999999997642 2346677899999999999887531 1
Q ss_pred C--------ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhcccccccc
Q 008324 153 K--------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKL 224 (570)
Q Consensus 153 ~--------l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 224 (570)
+ -.++|++||.......
T Consensus 138 ~~~~~~~~~~g~iv~isS~~~~~~~------------------------------------------------------- 162 (306)
T PRK07792 138 KAKAAGGPVYGRIVNTSSEAGLVGP------------------------------------------------------- 162 (306)
T ss_pred hhcccCCCCCcEEEEECCcccccCC-------------------------------------------------------
Confidence 0 1478999886533211
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCee
Q 008324 225 HGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVI 299 (570)
Q Consensus 225 ~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~ 299 (570)
.....|+.||+..+.+++.+ ..++++..+.|+. .....+ +...... . . ....
T Consensus 163 -~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~---~~~~~~~---~------------~---~~~~ 219 (306)
T PRK07792 163 -VGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTA---DVFGDAP---D------------V---EAGG 219 (306)
T ss_pred -CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhh---hhccccc---h------------h---hhhc
Confidence 11246999999999988754 3579999999973 111110 0000000 0 0 0011
Q ss_pred eeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 300 MDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 300 ~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.+.++.+++++++..++.... ....+++|.+.++
T Consensus 220 ~~~~~pe~va~~v~~L~s~~~-~~~tG~~~~v~gg 253 (306)
T PRK07792 220 IDPLSPEHVVPLVQFLASPAA-AEVNGQVFIVYGP 253 (306)
T ss_pred cCCCCHHHHHHHHHHHcCccc-cCCCCCEEEEcCC
Confidence 233578999999887764322 1223678888765
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.48 E-value=5.4e-12 Score=124.71 Aligned_cols=217 Identities=12% Similarity=0.105 Sum_probs=134.8
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+++||||||+||++++++|++.| .+|+++.|+... ..+.+.++ +.. ...++.++.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G---~~v~~~~r~~~~--~~~~~~~~---------~~~---------~~~~~~~~~~ 57 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDG---YRVAANCGPNEE--RAEAWLQE---------QGA---------LGFDFRVVEG 57 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCCHH--HHHHHHHH---------HHh---------hCCceEEEEe
Confidence 689999999999999999999998 577888884211 11111100 000 0246889999
Q ss_pred cCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---cCce
Q 008324 93 DISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLK 155 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~l~ 155 (570)
|++++ +..+.+ ...+|+|||+||.... .+.++..+++|+.|+..+++.+... .+..
T Consensus 58 D~~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 130 (242)
T TIGR01829 58 DVSSF-------ESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWG 130 (242)
T ss_pred cCCCH-------HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc
Confidence 99953 222222 2458999999986531 1345667899999988866554321 2567
Q ss_pred EEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHH
Q 008324 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (570)
Q Consensus 156 ~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
++|++||....... .....|+.+|
T Consensus 131 ~iv~iss~~~~~~~--------------------------------------------------------~~~~~y~~sk 154 (242)
T TIGR01829 131 RIINISSVNGQKGQ--------------------------------------------------------FGQTNYSAAK 154 (242)
T ss_pred EEEEEcchhhcCCC--------------------------------------------------------CCcchhHHHH
Confidence 89999986432111 1134699999
Q ss_pred HHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHH
Q 008324 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (570)
Q Consensus 236 ~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ 310 (570)
+..+.+++.. ..+++++.++|+.+.++...+.+ ...+.....+. ....+...+++++
T Consensus 155 ~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~---------~~~~~~~~~~~---------~~~~~~~~~~~a~ 216 (242)
T TIGR01829 155 AGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMR---------EDVLNSIVAQI---------PVGRLGRPEEIAA 216 (242)
T ss_pred HHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccc---------hHHHHHHHhcC---------CCCCCcCHHHHHH
Confidence 9777776553 35899999999999876442211 11111111111 1112346688999
Q ss_pred HHHHHHHHhhCCCCCCceEEecCC
Q 008324 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++..++.+.. ..-.++++.+.++
T Consensus 217 ~~~~l~~~~~-~~~~G~~~~~~gg 239 (242)
T TIGR01829 217 AVAFLASEEA-GYITGATLSINGG 239 (242)
T ss_pred HHHHHcCchh-cCccCCEEEecCC
Confidence 8876654222 1223678877765
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.48 E-value=2e-12 Score=128.91 Aligned_cols=164 Identities=16% Similarity=0.162 Sum_probs=113.1
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+++||||+|+||+++++.|++.| .+|+++.|+.... +.+.++ ++.. ..++..+.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G---~~v~~~~r~~~~~---~~~~~~---------l~~~---------~~~~~~~~~ 56 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDG---FAVAVADLNEETA---KETAKE---------INQA---------GGKAVAYKL 56 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHH---------HHhc---------CCeEEEEEc
Confidence 689999999999999999999988 5778888863211 111111 1110 246788999
Q ss_pred cCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c---cCc
Q 008324 93 DISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C---VKL 154 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~---~~l 154 (570)
|++++ +....++ ..+|+|||+|+.... .+.++..+++|+.|+..+++.+.. + +..
T Consensus 57 Dl~~~-------~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 129 (254)
T TIGR02415 57 DVSDK-------DQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHG 129 (254)
T ss_pred CCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCC
Confidence 99953 3332332 358999999987532 134567789999999988776653 1 123
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||....... +....|+.+
T Consensus 130 ~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~s 153 (254)
T TIGR02415 130 GKIINAASIAGHEGN--------------------------------------------------------PILSAYSST 153 (254)
T ss_pred eEEEEecchhhcCCC--------------------------------------------------------CCCcchHHH
Confidence 689999886433211 113569999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceecCC
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~ 263 (570)
|+..|.+++.. ..++.+.+++|+.+.++.
T Consensus 154 K~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~ 187 (254)
T TIGR02415 154 KFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPM 187 (254)
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEecCcccChh
Confidence 99999988754 347999999999986653
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.4e-12 Score=128.90 Aligned_cols=197 Identities=14% Similarity=0.130 Sum_probs=126.9
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++++|+||||||+||++++++|++.+. .+|+++.|+.... .+.+.+++ +.. + ..++.++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg--~~V~~~~r~~~~~--~~~~~~~l---------~~~-~-------~~~v~~~ 65 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAP--ARVVLAALPDDPR--RDAAVAQM---------KAA-G-------ASSVEVI 65 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCC--CeEEEEeCCcchh--HHHHHHHH---------Hhc-C-------CCceEEE
Confidence 578999999999999999999999852 5788888876431 11111111 110 0 1368899
Q ss_pred eccCCCCCCCCCchhhHHHHh--CCccEEEEcCccCCcc----cc---HHHHHHHhHHHHHHH----HHHHHHccCceEE
Q 008324 91 PGDISSEDLGLKDSNLKEELW--NELDIMVNSAAITKFD----ER---YDVAFGINTLGVIHL----VNFAKKCVKLKVF 157 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~--~~vdiViH~AA~v~f~----~~---~~~~~~~Nv~gt~~l----l~la~~~~~l~~~ 157 (570)
.+|+++++-- .+..+.+. .++|++||+||..... +. ....+++|+.|+..+ +.++++. +..++
T Consensus 66 ~~D~~~~~~~---~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~-~~~~i 141 (253)
T PRK07904 66 DFDALDTDSH---PKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ-GFGQI 141 (253)
T ss_pred EecCCChHHH---HHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc-CCceE
Confidence 9999964210 11122222 3699999999875321 11 123589999998875 4444443 56799
Q ss_pred EEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHH
Q 008324 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (570)
Q Consensus 158 V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~ 237 (570)
|++||....... .....|+.||+.
T Consensus 142 v~isS~~g~~~~--------------------------------------------------------~~~~~Y~~sKaa 165 (253)
T PRK07904 142 IAMSSVAGERVR--------------------------------------------------------RSNFVYGSTKAG 165 (253)
T ss_pred EEEechhhcCCC--------------------------------------------------------CCCcchHHHHHH
Confidence 999997532110 112359999998
Q ss_pred HHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHH
Q 008324 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (570)
Q Consensus 238 aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ai 312 (570)
.+.+.+.. ..++++++++|+.|..+... ... ..+ ..++.+++|+.+
T Consensus 166 ~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~-------~~~------------------~~~----~~~~~~~~A~~i 216 (253)
T PRK07904 166 LDGFYLGLGEALREYGVRVLVVRPGQVRTRMSA-------HAK------------------EAP----LTVDKEDVAKLA 216 (253)
T ss_pred HHHHHHHHHHHHhhcCCEEEEEeeCceecchhc-------cCC------------------CCC----CCCCHHHHHHHH
Confidence 87665543 45899999999999875321 000 000 136889999999
Q ss_pred HHHHH
Q 008324 313 IVAMV 317 (570)
Q Consensus 313 i~a~~ 317 (570)
+.++.
T Consensus 217 ~~~~~ 221 (253)
T PRK07904 217 VTAVA 221 (253)
T ss_pred HHHHH
Confidence 98885
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.3e-12 Score=128.07 Aligned_cols=223 Identities=15% Similarity=0.131 Sum_probs=131.3
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.|+|+||||||+||+.+++.|++.| .+|+++.+.... ..+.+. +.++. . ..++..+.
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g---~~v~~~~~~~~~--~~~~~~---------~~~~~-~--------~~~~~~~~ 58 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARG---WSVGINYARDAA--AAEETA---------DAVRA-A--------GGRACVVA 58 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCC---CEEEEEeCCCHH--HHHHHH---------HHHHh-c--------CCcEEEEE
Confidence 3689999999999999999999988 456655543211 111111 11111 0 24688999
Q ss_pred ccCCCCCCCCCchhhHHHH---hCCccEEEEcCccCCc----c----ccHHHHHHHhHHHHHHHHHH-HHHccC-----c
Q 008324 92 GDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITKF----D----ERYDVAFGINTLGVIHLVNF-AKKCVK-----L 154 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l---~~~vdiViH~AA~v~f----~----~~~~~~~~~Nv~gt~~ll~l-a~~~~~-----l 154 (570)
+|+++++-- .+..+.+ ...+|+|||+||.... . +.++..+++|+.|+..+++. ++.+.. -
T Consensus 59 ~Dl~~~~~~---~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~ 135 (248)
T PRK06947 59 GDVANEADV---IAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRG 135 (248)
T ss_pred eccCCHHHH---HHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCC
Confidence 999954210 0111111 2469999999996421 1 23456689999999998754 444421 1
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||....-... .....|+.|
T Consensus 136 ~~ii~~sS~~~~~~~~-------------------------------------------------------~~~~~Y~~s 160 (248)
T PRK06947 136 GAIVNVSSIASRLGSP-------------------------------------------------------NEYVDYAGS 160 (248)
T ss_pred cEEEEECchhhcCCCC-------------------------------------------------------CCCcccHhh
Confidence 3599999864321100 012469999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHH
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..+.+++.+ ..+++++++||+.|.++.... + ..+.. ..... +.. + ..-..++++++
T Consensus 161 K~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~-----~--~~~~~-~~~~~-~~~---~-----~~~~~~~e~va 223 (248)
T PRK06947 161 KGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHAS-----G--GQPGR-AARLG-AQT---P-----LGRAGEADEVA 223 (248)
T ss_pred HHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccc-----c--CCHHH-HHHHh-hcC---C-----CCCCcCHHHHH
Confidence 99999887654 347999999999998764311 0 00100 11111 000 0 01135789999
Q ss_pred HHHHHHHHHhhCCCCCCceEEecC
Q 008324 310 NAMIVAMVAHAKQPSDANIYHVGS 333 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s 333 (570)
++++.++.... ....++++.+.+
T Consensus 224 ~~~~~l~~~~~-~~~~G~~~~~~g 246 (248)
T PRK06947 224 ETIVWLLSDAA-SYVTGALLDVGG 246 (248)
T ss_pred HHHHHHcCccc-cCcCCceEeeCC
Confidence 99988775322 122356665544
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.47 E-value=6e-13 Score=133.75 Aligned_cols=165 Identities=16% Similarity=0.199 Sum_probs=115.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||||+||++++++|++.| .+|+++.|+.... +.+. +.. ..++..
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~l~-------------~~~--------~~~~~~ 55 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEG---ARVAVLDKSAAGL---QELE-------------AAH--------GDAVVG 55 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHH-------------hhc--------CCceEE
Confidence 468999999999999999999999998 6778887764221 1111 111 246788
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCC----c---c-----ccHHHHHHHhHHHHHHHHHHHHH
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK----F---D-----ERYDVAFGINTLGVIHLVNFAKK 150 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~----f---~-----~~~~~~~~~Nv~gt~~ll~la~~ 150 (570)
+.+|++++ +....++ .++|++||+||... + . +.++..+++|+.|+..+++++..
T Consensus 56 ~~~D~~~~-------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 128 (262)
T TIGR03325 56 VEGDVRSL-------DDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALP 128 (262)
T ss_pred EEeccCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHH
Confidence 99999953 2222222 46899999998642 1 1 13567789999999999998875
Q ss_pred c--cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 008324 151 C--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (570)
Q Consensus 151 ~--~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
. +.-.++|++||....... ...
T Consensus 129 ~~~~~~g~iv~~sS~~~~~~~--------------------------------------------------------~~~ 152 (262)
T TIGR03325 129 ALVASRGSVIFTISNAGFYPN--------------------------------------------------------GGG 152 (262)
T ss_pred HHhhcCCCEEEEeccceecCC--------------------------------------------------------CCC
Confidence 3 122468888876433111 112
Q ss_pred chHHHHHHHHHHHHHHh----ccCCcEEEEecCceecCCC
Q 008324 229 NTYVFTKTMGEMLMQQS----KENLSLVIIRPTVVSGTYK 264 (570)
Q Consensus 229 n~Y~~sK~~aE~lv~~~----~~~lp~~IvRPsiV~g~~~ 264 (570)
..|+.||+..+.+++.+ ...+.+..+.|+.|..+..
T Consensus 153 ~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~ 192 (262)
T TIGR03325 153 PLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLR 192 (262)
T ss_pred chhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCc
Confidence 46999999999998765 3348899999999877643
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.47 E-value=9.3e-12 Score=125.40 Aligned_cols=222 Identities=18% Similarity=0.168 Sum_probs=158.7
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|+|||||||+|++++++|++++ ++|.+++|+....... ...+.++.+
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~---~~v~~~~r~~~~~~~~----------------------------~~~v~~~~~ 49 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARG---HEVRAAVRNPEAAAAL----------------------------AGGVEVVLG 49 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCC---CEEEEEEeCHHHHHhh----------------------------cCCcEEEEe
Confidence 579999999999999999999998 7889999987543211 157889999
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCCcc
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~g~ 172 (570)
|+. +...+....++++.++++.+... .+. ........+..+..+.+. .+.++++++|......
T Consensus 50 d~~-------~~~~l~~a~~G~~~~~~i~~~~~-~~~--~~~~~~~~~~~~~a~~a~--~~~~~~~~~s~~~~~~----- 112 (275)
T COG0702 50 DLR-------DPKSLVAGAKGVDGVLLISGLLD-GSD--AFRAVQVTAVVRAAEAAG--AGVKHGVSLSVLGADA----- 112 (275)
T ss_pred ccC-------CHhHHHHHhccccEEEEEecccc-ccc--chhHHHHHHHHHHHHHhc--CCceEEEEeccCCCCC-----
Confidence 999 45556678899999999988765 333 223444445555555544 2678888888764322
Q ss_pred cccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccCCcEE
Q 008324 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLV 252 (570)
Q Consensus 173 i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp~~ 252 (570)
..+..|..+|..+|..+.+ .+++.+
T Consensus 113 -----------------------------------------------------~~~~~~~~~~~~~e~~l~~--sg~~~t 137 (275)
T COG0702 113 -----------------------------------------------------ASPSALARAKAAVEAALRS--SGIPYT 137 (275)
T ss_pred -----------------------------------------------------CCccHHHHHHHHHHHHHHh--cCCCeE
Confidence 1245699999999999998 789999
Q ss_pred EEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEec
Q 008324 253 IIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVG 332 (570)
Q Consensus 253 IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~ 332 (570)
++||+..+..... . ........+......+. .....+.++|++.++..++.... ..+++|.++
T Consensus 138 ~lr~~~~~~~~~~----------~--~~~~~~~~~~~~~~~~~--~~~~~i~~~d~a~~~~~~l~~~~---~~~~~~~l~ 200 (275)
T COG0702 138 TLRRAAFYLGAGA----------A--FIEAAEAAGLPVIPRGI--GRLSPIAVDDVAEALAAALDAPA---TAGRTYELA 200 (275)
T ss_pred EEecCeeeeccch----------h--HHHHHHhhCCceecCCC--CceeeeEHHHHHHHHHHHhcCCc---ccCcEEEcc
Confidence 9997766654321 0 02233333333222222 37899999999999988775222 237899999
Q ss_pred CCCCCcccHHHHHHHHhhhcccCC
Q 008324 333 SSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 333 s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
++ ...+..++...+....++..
T Consensus 201 g~--~~~~~~~~~~~l~~~~gr~~ 222 (275)
T COG0702 201 GP--EALTLAELASGLDYTIGRPV 222 (275)
T ss_pred CC--ceecHHHHHHHHHHHhCCcc
Confidence 98 78999999999998888653
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.46 E-value=2e-12 Score=129.32 Aligned_cols=219 Identities=11% Similarity=0.113 Sum_probs=138.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|.||++++++|++.| .+|.++.|.... ...+.+. + ...++..
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~G---~~vv~~~~~~~~-~~~~~~~-------------~---------~~~~~~~ 61 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAG---CDIVGINIVEPT-ETIEQVT-------------A---------LGRRFLS 61 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEecCcchH-HHHHHHH-------------h---------cCCeEEE
Confidence 779999999999999999999999998 556655554321 1111111 1 0246778
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-cc--
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-CV-- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~~-- 152 (570)
+.+|++++ +..+.++ ..+|++||+||.... .+.++..+++|+.|+.++++.+.. +.
T Consensus 62 ~~~Dl~~~-------~~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 134 (253)
T PRK08993 62 LTADLRKI-------DGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQ 134 (253)
T ss_pred EECCCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhC
Confidence 99999953 3333333 358999999997542 145778899999999999988754 21
Q ss_pred C-ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 153 K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 153 ~-l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+ -.++|++||........ ....|
T Consensus 135 ~~~g~iv~isS~~~~~~~~--------------------------------------------------------~~~~Y 158 (253)
T PRK08993 135 GNGGKIINIASMLSFQGGI--------------------------------------------------------RVPSY 158 (253)
T ss_pred CCCeEEEEECchhhccCCC--------------------------------------------------------CCcch
Confidence 1 25799999976543211 12369
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..|.+.+.. ..++++..++||.|-.+...... +. ......... . .+. .-+...+
T Consensus 159 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~---~~----~~~~~~~~~-~---~p~-----~r~~~p~ 222 (253)
T PRK08993 159 TASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLR---AD----EQRSAEILD-R---IPA-----GRWGLPS 222 (253)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhc---cc----hHHHHHHHh-c---CCC-----CCCcCHH
Confidence 99999998888755 35799999999999775432110 00 000001111 1 111 1245679
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++++++.++..... .-.+.++.+.++
T Consensus 223 eva~~~~~l~s~~~~-~~~G~~~~~dgg 249 (253)
T PRK08993 223 DLMGPVVFLASSASD-YINGYTIAVDGG 249 (253)
T ss_pred HHHHHHHHHhCcccc-CccCcEEEECCC
Confidence 999999888753222 222556655443
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.8e-12 Score=126.64 Aligned_cols=206 Identities=16% Similarity=0.194 Sum_probs=129.1
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
+|+||||+|+||+++++.|++.| .+|+++.|++.. ..+.+.++ ++...+ ...+..+.+|
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G---~~v~~~~r~~~~--~~~~~~~~---------~~~~~~-------~~~~~~~~~D 59 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQG---AKVFLTDINDAA--GLDAFAAE---------INAAHG-------EGVAFAAVQD 59 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCcch--HHHHHHHH---------HHhcCC-------CceEEEEEee
Confidence 38999999999999999999988 678888887321 12222211 111110 1234567899
Q ss_pred CCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCcc-------ccHHHHHHHhHH----HHHHHHHHHHHccCce
Q 008324 94 ISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKFD-------ERYDVAFGINTL----GVIHLVNFAKKCVKLK 155 (570)
Q Consensus 94 l~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f~-------~~~~~~~~~Nv~----gt~~ll~la~~~~~l~ 155 (570)
++++ +..+.+ ...+|+|||+|+..... +.+...+++|+. +++.++..+++. +.+
T Consensus 60 ~~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~ 131 (251)
T PRK07069 60 VTDE-------AQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS-QPA 131 (251)
T ss_pred cCCH-------HHHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCc
Confidence 9953 322232 24689999999976431 234566788988 677777777764 567
Q ss_pred EEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHH
Q 008324 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (570)
Q Consensus 156 ~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
++|++||...+.... ....|+.||
T Consensus 132 ~ii~~ss~~~~~~~~--------------------------------------------------------~~~~Y~~sK 155 (251)
T PRK07069 132 SIVNISSVAAFKAEP--------------------------------------------------------DYTAYNASK 155 (251)
T ss_pred EEEEecChhhccCCC--------------------------------------------------------CCchhHHHH
Confidence 999999976543211 124699999
Q ss_pred HHHHHHHHHh-------ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHH
Q 008324 236 TMGEMLMQQS-------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (570)
Q Consensus 236 ~~aE~lv~~~-------~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
+..+.+++.+ ..+++++.++|+.+.++...+...... .......+.++.. ...+..++|+
T Consensus 156 ~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~~---------~~~~~~~~~v 222 (251)
T PRK07069 156 AAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLG----EEEATRKLARGVP---------LGRLGEPDDV 222 (251)
T ss_pred HHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhcc----chhHHHHHhccCC---------CCCCcCHHHH
Confidence 9988887754 124889999999998865432111000 0111111222211 1124578999
Q ss_pred HHHHHHHHH
Q 008324 309 VNAMIVAMV 317 (570)
Q Consensus 309 a~aii~a~~ 317 (570)
+++++.++.
T Consensus 223 a~~~~~l~~ 231 (251)
T PRK07069 223 AHAVLYLAS 231 (251)
T ss_pred HHHHHHHcC
Confidence 999988664
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.5e-12 Score=133.41 Aligned_cols=206 Identities=15% Similarity=0.145 Sum_probs=136.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++|++|+||||||.||.++++.|++.| .+|+++.|+... .+.+. ++.+. ..++..
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---l~~~~-------------~~l~~------~~~~~~ 61 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHARG---AKLALVDLEEAE---LAALA-------------AELGG------DDRVLT 61 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------HHhcC------CCcEEE
Confidence 579999999999999999999999998 578888886432 11111 11110 135667
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc--cC
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~--~~ 153 (570)
+.+|++++ +..+.++ ..+|+|||+||...+ .+.++..+++|+.|+.++++.+... ++
T Consensus 62 ~~~Dv~d~-------~~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~ 134 (296)
T PRK05872 62 VVADVTDL-------AAMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER 134 (296)
T ss_pred EEecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 78999953 3232322 468999999997542 2346677899999999999988642 23
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||...+... +....|+.
T Consensus 135 ~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 158 (296)
T PRK05872 135 RGYVLQVSSLAAFAAA--------------------------------------------------------PGMAAYCA 158 (296)
T ss_pred CCEEEEEeCHhhcCCC--------------------------------------------------------CCchHHHH
Confidence 3579999987554321 11356999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHH
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..+.+.+.. ..++.+.++.|+.|.++....... . ......... ..+ ......++.+++
T Consensus 159 sKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~---~----~~~~~~~~~-~~~------~p~~~~~~~~~v 224 (296)
T PRK05872 159 SKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADA---D----LPAFRELRA-RLP------WPLRRTTSVEKC 224 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccc---c----chhHHHHHh-hCC------CcccCCCCHHHH
Confidence 999999988754 357999999999887654321110 0 011111111 110 011245789999
Q ss_pred HHHHHHHHH
Q 008324 309 VNAMIVAMV 317 (570)
Q Consensus 309 a~aii~a~~ 317 (570)
+++++.++.
T Consensus 225 a~~i~~~~~ 233 (296)
T PRK05872 225 AAAFVDGIE 233 (296)
T ss_pred HHHHHHHHh
Confidence 999998875
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.6e-12 Score=147.34 Aligned_cols=229 Identities=13% Similarity=0.139 Sum_probs=142.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+||||||+|+||++++++|++.| .+|+++.|+.... +.+. +.+....+ ..++..
T Consensus 412 l~gkvvLVTGasggIG~aiA~~La~~G---a~Vvi~~r~~~~~---~~~~---------~~l~~~~~-------~~~~~~ 469 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRETARRLAAEG---AHVVLADLNLEAA---EAVA---------AEINGQFG-------AGRAVA 469 (676)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCC---CEEEEEeCCHHHH---HHHH---------HHHHhhcC-------CCcEEE
Confidence 578999999999999999999999998 5788888864321 1111 11111111 135778
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-cc--
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-CV-- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~~-- 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|...+.+.+.. +.
T Consensus 470 v~~Dvtd-------~~~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~ 542 (676)
T TIGR02632 470 LKMDVTD-------EQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQ 542 (676)
T ss_pred EECCCCC-------HHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999995 333334433 68999999997532 133567788999998877654432 21
Q ss_pred C-ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 153 K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 153 ~-l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+ -.++|++||....... .....|
T Consensus 543 ~~~g~IV~iSS~~a~~~~--------------------------------------------------------~~~~aY 566 (676)
T TIGR02632 543 GLGGNIVFIASKNAVYAG--------------------------------------------------------KNASAY 566 (676)
T ss_pred CCCCEEEEEeChhhcCCC--------------------------------------------------------CCCHHH
Confidence 2 2479999986432211 113579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCcee-cCCCCCCCccccCcc---c--hHHHHHHHhcCCceeeecCCCeee
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVS-GTYKEPFPGWVEDLK---T--INTLFVASAQGNLRCLVGETKVIM 300 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~-g~~~ep~~gw~~~~~---~--~~~~i~~~~~G~~~~~~~~~~~~~ 300 (570)
+.||+..|.+++.+ ..++++..++|+.|. ++.. .-.+|..... + ...+. ..+.......
T Consensus 567 ~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~-~~~~~~~~~~~~~~~~~~~~~---------~~~~~r~~l~ 636 (676)
T TIGR02632 567 SAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGI-WDGEWREERAAAYGIPADELE---------EHYAKRTLLK 636 (676)
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCccc-ccccchhhhhhcccCChHHHH---------HHHHhcCCcC
Confidence 99999999998865 347999999999886 3211 0012221100 0 00000 0011112223
Q ss_pred eeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 301 d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
..+..+|+|+++..++..... ...+.++++.+|
T Consensus 637 r~v~peDVA~av~~L~s~~~~-~~TG~~i~vDGG 669 (676)
T TIGR02632 637 RHIFPADIAEAVFFLASSKSE-KTTGCIITVDGG 669 (676)
T ss_pred CCcCHHHHHHHHHHHhCCccc-CCcCcEEEECCC
Confidence 457889999999987642222 223678888776
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.8e-12 Score=128.61 Aligned_cols=196 Identities=18% Similarity=0.163 Sum_probs=130.0
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|+||||||+||.+++++|++.| .+|+++.|+..+. +.+.++ ++.. + ..++.++.
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G---~~Vi~~~r~~~~~---~~~~~~---------~~~~-~-------~~~~~~~~ 57 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAG---ARLYLAARDVERL---ERLADD---------LRAR-G-------AVAVSTHE 57 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcC---CEEEEEeCCHHHH---HHHHHH---------HHHh-c-------CCeEEEEe
Confidence 4789999999999999999999998 5788998875322 111111 1111 1 25788999
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHHH-c--cCceEEEEEe
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAKK-C--VKLKVFVHVS 161 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~-------~~~~~~~~~Nv~gt~~ll~la~~-~--~~l~~~V~vS 161 (570)
+|+++++- -.+..+.+.+.+|+|||+||..... +.+...+++|+.|+.++++.+.. + .+..++|++|
T Consensus 58 ~Dl~~~~~---~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~s 134 (243)
T PRK07102 58 LDILDTAS---HAAFLDSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGIS 134 (243)
T ss_pred cCCCChHH---HHHHHHHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 99995420 0111122233579999999865321 22345688999999999988765 2 2457899999
Q ss_pred cceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHH
Q 008324 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (570)
Q Consensus 162 Ta~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~l 241 (570)
|....... .....|+.||+..+.+
T Consensus 135 S~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~~ 158 (243)
T PRK07102 135 SVAGDRGR--------------------------------------------------------ASNYVYGSAKAALTAF 158 (243)
T ss_pred cccccCCC--------------------------------------------------------CCCcccHHHHHHHHHH
Confidence 87432111 0123599999998888
Q ss_pred HHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHH
Q 008324 242 MQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (570)
Q Consensus 242 v~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~ 316 (570)
.+.. ..++++.+++|+.|.++..... . ++ ..-.+++++++++++.++
T Consensus 159 ~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~-------~----------------~~-----~~~~~~~~~~a~~i~~~~ 210 (243)
T PRK07102 159 LSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL-------K----------------LP-----GPLTAQPEEVAKDIFRAI 210 (243)
T ss_pred HHHHHHHhhccCcEEEEEecCcccChhhhcc-------C----------------CC-----ccccCCHHHHHHHHHHHH
Confidence 7754 4579999999999987532110 0 00 012357899999998877
Q ss_pred H
Q 008324 317 V 317 (570)
Q Consensus 317 ~ 317 (570)
.
T Consensus 211 ~ 211 (243)
T PRK07102 211 E 211 (243)
T ss_pred h
Confidence 5
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.7e-12 Score=130.54 Aligned_cols=155 Identities=22% Similarity=0.257 Sum_probs=114.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||+++++.|++.| .+|.++.|+..... ..++.+
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~G---~~v~~~~~~~~~~~------------------------------~~~~~~ 53 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLANG---ANVVNADIHGGDGQ------------------------------HENYQF 53 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCccccc------------------------------cCceEE
Confidence 578999999999999999999999998 56777777653211 146778
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc----------------cccHHHHHHHhHHHHHHHHH
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF----------------DERYDVAFGINTLGVIHLVN 146 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f----------------~~~~~~~~~~Nv~gt~~ll~ 146 (570)
+.+|++++ +..+.++ ..+|+|||+||.... .+.++..+++|+.|+..+++
T Consensus 54 ~~~D~~~~-------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 126 (266)
T PRK06171 54 VPTDVSSA-------EEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQ 126 (266)
T ss_pred EEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHH
Confidence 99999953 3333332 358999999996421 13456678999999999999
Q ss_pred HHHHc---cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccc
Q 008324 147 FAKKC---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAK 223 (570)
Q Consensus 147 la~~~---~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 223 (570)
++... .+-.++|++||.......
T Consensus 127 ~~~~~~~~~~~g~iv~isS~~~~~~~------------------------------------------------------ 152 (266)
T PRK06171 127 AVARQMVKQHDGVIVNMSSEAGLEGS------------------------------------------------------ 152 (266)
T ss_pred HHHHHHHhcCCcEEEEEccccccCCC------------------------------------------------------
Confidence 88753 133579999987543211
Q ss_pred cCCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCcee
Q 008324 224 LHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVS 260 (570)
Q Consensus 224 ~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~ 260 (570)
.....|+.||+..+.+++.. ..++++.+++|+.+.
T Consensus 153 --~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 153 --EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE 192 (266)
T ss_pred --CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence 11257999999999988765 357999999999885
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.6e-12 Score=130.59 Aligned_cols=225 Identities=12% Similarity=0.109 Sum_probs=136.6
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
..++||+|+||||+|+||++++++|++.| .+|++..|+... ..+.+.++ +.... ..++
T Consensus 4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G---~~v~~~~~~~~~--~~~~~~~~---------~~~~~--------~~~~ 61 (260)
T PRK08416 4 NEMKGKTLVISGGTRGIGKAIVYEFAQSG---VNIAFTYNSNVE--EANKIAED---------LEQKY--------GIKA 61 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCCHH--HHHHHHHH---------HHHhc--------CCce
Confidence 34689999999999999999999999998 566666554321 11111111 11111 2468
Q ss_pred EEEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCC---------c----cccHHHHHHHhHHHHHHHHHH
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK---------F----DERYDVAFGINTLGVIHLVNF 147 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~---------f----~~~~~~~~~~Nv~gt~~ll~l 147 (570)
.++.+|++++ +..+.++ ..+|++||+||... + .+.+...+++|+.+...+.+.
T Consensus 62 ~~~~~D~~~~-------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 134 (260)
T PRK08416 62 KAYPLNILEP-------ETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQE 134 (260)
T ss_pred EEEEcCCCCH-------HHHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHH
Confidence 8999999954 2222222 35899999997531 1 133556678898887776665
Q ss_pred HHH-cc--CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhcccccccc
Q 008324 148 AKK-CV--KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKL 224 (570)
Q Consensus 148 a~~-~~--~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 224 (570)
+.. +. +-.++|++||.......
T Consensus 135 ~~~~~~~~~~g~iv~isS~~~~~~~------------------------------------------------------- 159 (260)
T PRK08416 135 AAKRMEKVGGGSIISLSSTGNLVYI------------------------------------------------------- 159 (260)
T ss_pred HHHhhhccCCEEEEEEeccccccCC-------------------------------------------------------
Confidence 543 21 34689999986322110
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCee
Q 008324 225 HGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVI 299 (570)
Q Consensus 225 ~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~ 299 (570)
+....|+.||+..+.+++.. ..++.+..+.|+.|-.+.....++. ........... + .
T Consensus 160 -~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~-------~~~~~~~~~~~-------~--~ 222 (260)
T PRK08416 160 -ENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNY-------EEVKAKTEELS-------P--L 222 (260)
T ss_pred -CCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCC-------HHHHHHHHhcC-------C--C
Confidence 11246999999999998765 3479999999998866532221111 11111111110 0 1
Q ss_pred eeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 300 MDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 300 ~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.-+...++++++++.++..... --.++++.+.++
T Consensus 223 ~r~~~p~~va~~~~~l~~~~~~-~~~G~~i~vdgg 256 (260)
T PRK08416 223 NRMGQPEDLAGACLFLCSEKAS-WLTGQTIVVDGG 256 (260)
T ss_pred CCCCCHHHHHHHHHHHcChhhh-cccCcEEEEcCC
Confidence 1245789999999987753222 112567766554
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=5.4e-12 Score=131.25 Aligned_cols=200 Identities=14% Similarity=0.179 Sum_probs=131.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||.||++++++|++.| .+|+++.|+... .+.+.++ +++ ...++.+
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G---~~Vvl~~R~~~~---l~~~~~~---------~~~---------~g~~~~~ 60 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRG---ARLVLAARDEEA---LQAVAEE---------CRA---------LGAEVLV 60 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHH---------HHh---------cCCcEEE
Confidence 568999999999999999999999998 678888886432 1222111 111 0246778
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc---c----ccHHHHHHHhHHHHHHHHHHHHH-c--c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF---D----ERYDVAFGINTLGVIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f---~----~~~~~~~~~Nv~gt~~ll~la~~-~--~ 152 (570)
+.+|++++ +..+.++ ..+|++||+||...+ . +.++..+++|+.|+.++.+.+.. + .
T Consensus 61 ~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~ 133 (330)
T PRK06139 61 VPTDVTDA-------DQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQ 133 (330)
T ss_pred EEeeCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHc
Confidence 89999953 3333433 468999999996532 2 34566799999999998877643 1 1
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|.+||...+... +....|+
T Consensus 134 ~~g~iV~isS~~~~~~~--------------------------------------------------------p~~~~Y~ 157 (330)
T PRK06139 134 GHGIFINMISLGGFAAQ--------------------------------------------------------PYAAAYS 157 (330)
T ss_pred CCCEEEEEcChhhcCCC--------------------------------------------------------CCchhHH
Confidence 34578999886533211 1235799
Q ss_pred HHHHHHHHHHH----Hhc--cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 233 FTKTMGEMLMQ----QSK--ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 233 ~sK~~aE~lv~----~~~--~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
.||+..+.+.+ +.. .++.++.+.|+.|.++..+. ..+.. +. .......++..+
T Consensus 158 asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~----~~~~~-----------~~------~~~~~~~~~~pe 216 (330)
T PRK06139 158 ASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRH----GANYT-----------GR------RLTPPPPVYDPR 216 (330)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccc----ccccc-----------cc------cccCCCCCCCHH
Confidence 99996555444 432 37999999999998764321 11100 00 000112356889
Q ss_pred HHHHHHHHHHH
Q 008324 307 MVVNAMIVAMV 317 (570)
Q Consensus 307 dva~aii~a~~ 317 (570)
++|++++.++.
T Consensus 217 ~vA~~il~~~~ 227 (330)
T PRK06139 217 RVAKAVVRLAD 227 (330)
T ss_pred HHHHHHHHHHh
Confidence 99999998875
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.5e-12 Score=124.29 Aligned_cols=175 Identities=15% Similarity=0.134 Sum_probs=115.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.| .+|+++.|+.... +.+. +.+++.. ..++..
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g---~~V~~~~r~~~~~---~~~~---------~~l~~~~--------~~~~~~ 60 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAG---ATVILVARHQKKL---EKVY---------DAIVEAG--------HPEPFA 60 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcC---CEEEEEeCChHHH---HHHH---------HHHHHcC--------CCCcce
Confidence 578999999999999999999999988 5788888875321 1111 2222110 134567
Q ss_pred EeccCCCCCCCCCchhhHHHH---h-CCccEEEEcCccCC----cc----ccHHHHHHHhHHHHHHHHHHHHHc---cCc
Q 008324 90 VPGDISSEDLGLKDSNLKEEL---W-NELDIMVNSAAITK----FD----ERYDVAFGINTLGVIHLVNFAKKC---VKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l---~-~~vdiViH~AA~v~----f~----~~~~~~~~~Nv~gt~~ll~la~~~---~~l 154 (570)
+.+|+++.+.. +-....+.+ + .++|+|||+||... +. +.+...+++|+.|+.++++.+.+. .+-
T Consensus 61 ~~~D~~~~~~~-~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~ 139 (239)
T PRK08703 61 IRFDLMSAEEK-EFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPD 139 (239)
T ss_pred EEeeecccchH-HHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCC
Confidence 78898742100 001111111 2 46899999999642 11 335567899999999998877552 134
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||...... . .....|+.|
T Consensus 140 ~~iv~~ss~~~~~~---------~-----------------------------------------------~~~~~Y~~s 163 (239)
T PRK08703 140 ASVIFVGESHGETP---------K-----------------------------------------------AYWGGFGAS 163 (239)
T ss_pred CEEEEEeccccccC---------C-----------------------------------------------CCccchHHh
Confidence 58888887532110 0 112469999
Q ss_pred HHHHHHHHHHh-----c-cCCcEEEEecCceecCCC
Q 008324 235 KTMGEMLMQQS-----K-ENLSLVIIRPTVVSGTYK 264 (570)
Q Consensus 235 K~~aE~lv~~~-----~-~~lp~~IvRPsiV~g~~~ 264 (570)
|+..|.+++.+ . .++++++++||.|.++..
T Consensus 164 Kaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~ 199 (239)
T PRK08703 164 KAALNYLCKVAADEWERFGNLRANVLVPGPINSPQR 199 (239)
T ss_pred HHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccc
Confidence 99999998654 1 269999999999988753
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.7e-12 Score=128.95 Aligned_cols=165 Identities=18% Similarity=0.240 Sum_probs=116.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||||+||++++++|++.| .+|+++.|++... +.+. ++. ..++.+
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~-------------~~~--------~~~~~~ 56 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEG---ARVAVLERSAEKL---ASLR-------------QRF--------GDHVLV 56 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHH-------------HHh--------CCcceE
Confidence 578999999999999999999999998 5678888865321 1211 111 246788
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-----c---c----cHHHHHHHhHHHHHHHHHHHHH
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-----D---E----RYDVAFGINTLGVIHLVNFAKK 150 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-----~---~----~~~~~~~~Nv~gt~~ll~la~~ 150 (570)
+.+|++++ +..+.++ ..+|++||+||.... + + .++..+++|+.|+..+++.+..
T Consensus 57 ~~~D~~~~-------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 129 (263)
T PRK06200 57 VEGDVTSY-------ADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALP 129 (263)
T ss_pred EEccCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHH
Confidence 99999953 2222322 358999999996431 1 1 1456678999999999888764
Q ss_pred c--cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 008324 151 C--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (570)
Q Consensus 151 ~--~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
. +.-.++|++||...+... ...
T Consensus 130 ~~~~~~g~iv~~sS~~~~~~~--------------------------------------------------------~~~ 153 (263)
T PRK06200 130 ALKASGGSMIFTLSNSSFYPG--------------------------------------------------------GGG 153 (263)
T ss_pred HHHhcCCEEEEECChhhcCCC--------------------------------------------------------CCC
Confidence 2 122479999887544221 112
Q ss_pred chHHHHHHHHHHHHHHh----ccCCcEEEEecCceecCCC
Q 008324 229 NTYVFTKTMGEMLMQQS----KENLSLVIIRPTVVSGTYK 264 (570)
Q Consensus 229 n~Y~~sK~~aE~lv~~~----~~~lp~~IvRPsiV~g~~~ 264 (570)
..|+.||+..+.+++.. .+++.+..+.|+.|..+..
T Consensus 154 ~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~ 193 (263)
T PRK06200 154 PLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLR 193 (263)
T ss_pred chhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCc
Confidence 46999999999988765 3468999999999977643
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.8e-12 Score=128.08 Aligned_cols=220 Identities=10% Similarity=0.058 Sum_probs=137.0
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
||+++||||+|+||+++++.|++.| .+|+++.|+... .+.+.++ ++.. ..++.++.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G---~~Vi~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~~~ 56 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEG---ANVVITGRTKEK---LEEAKLE---------IEQF---------PGQVLTVQ 56 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHhc---------CCcEEEEE
Confidence 6899999999999999999999988 578888887432 1121111 1110 24688999
Q ss_pred ccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCC---c----cccHHHHHHHhHHHHHHHHHHHHHc---cC-
Q 008324 92 GDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK---F----DERYDVAFGINTLGVIHLVNFAKKC---VK- 153 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~---f----~~~~~~~~~~Nv~gt~~ll~la~~~---~~- 153 (570)
+|++++ +..+.++ ..+|+|||+||... + .+.++..+++|+.|+.++++++.+. .+
T Consensus 57 ~D~~~~-------~~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 129 (252)
T PRK07677 57 MDVRNP-------EDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGI 129 (252)
T ss_pred ecCCCH-------HHHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCC
Confidence 999953 3233322 46899999998532 1 1346778999999999999988542 12
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
-.++|++||.+..... .....|+.
T Consensus 130 ~g~ii~isS~~~~~~~--------------------------------------------------------~~~~~Y~~ 153 (252)
T PRK07677 130 KGNIINMVATYAWDAG--------------------------------------------------------PGVIHSAA 153 (252)
T ss_pred CEEEEEEcChhhccCC--------------------------------------------------------CCCcchHH
Confidence 3579999987532211 11246999
Q ss_pred HHHHHHHHHHHh----c--cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 234 TKTMGEMLMQQS----K--ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 234 sK~~aE~lv~~~----~--~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
||+..+.+++.. . .++++..++||.|.++.... ..|.+ ......+.+... ..-+...++
T Consensus 154 sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~-~~~~~-----~~~~~~~~~~~~---------~~~~~~~~~ 218 (252)
T PRK07677 154 AKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGAD-KLWES-----EEAAKRTIQSVP---------LGRLGTPEE 218 (252)
T ss_pred HHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccc-cccCC-----HHHHHHHhccCC---------CCCCCCHHH
Confidence 999988887752 2 48999999999987532110 01111 111111111110 112456788
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++++..++.... ..-.+.++.+.++
T Consensus 219 va~~~~~l~~~~~-~~~~g~~~~~~gg 244 (252)
T PRK07677 219 IAGLAYFLLSDEA-AYINGTCITMDGG 244 (252)
T ss_pred HHHHHHHHcCccc-cccCCCEEEECCC
Confidence 9998877664221 1123566666554
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=6.9e-12 Score=142.64 Aligned_cols=194 Identities=16% Similarity=0.233 Sum_probs=135.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||||+||++++++|++.| .+|+++.|+.... +.+.++ +... ..++.+
T Consensus 369 ~~~k~vlItGas~giG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~~---------~~~~---------~~~~~~ 424 (657)
T PRK07201 369 LVGKVVLITGASSGIGRATAIKVAEAG---ATVFLVARNGEAL---DELVAE---------IRAK---------GGTAHA 424 (657)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHH---------HHhc---------CCcEEE
Confidence 568999999999999999999999998 6788888864321 111111 1110 246888
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCC---c------cccHHHHHHHhHHHHHHHHHHHHH-c-
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITK---F------DERYDVAFGINTLGVIHLVNFAKK-C- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~---f------~~~~~~~~~~Nv~gt~~ll~la~~-~- 151 (570)
+.+|+++ .+..+.+++ ++|+|||+||... + .+.++..+++|+.|+.++++.+.. +
T Consensus 425 ~~~Dv~~-------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 497 (657)
T PRK07201 425 YTCDLTD-------SAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMR 497 (657)
T ss_pred EEecCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999995 333333333 6899999999642 1 134567789999999988776543 2
Q ss_pred -cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+..++|++||..++.... ....
T Consensus 498 ~~~~g~iv~isS~~~~~~~~--------------------------------------------------------~~~~ 521 (657)
T PRK07201 498 ERRFGHVVNVSSIGVQTNAP--------------------------------------------------------RFSA 521 (657)
T ss_pred hcCCCEEEEECChhhcCCCC--------------------------------------------------------Ccch
Confidence 2557899999986654211 1246
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..+.+++.+ ..++.+++++|+.|.++...+... + . ....++.
T Consensus 522 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~----------------------~-~----~~~~~~~ 574 (657)
T PRK07201 522 YVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR----------------------Y-N----NVPTISP 574 (657)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc----------------------c-c----CCCCCCH
Confidence 999999999988764 357999999999998764432100 0 0 1124689
Q ss_pred HHHHHHHHHHHH
Q 008324 306 DMVVNAMIVAMV 317 (570)
Q Consensus 306 Ddva~aii~a~~ 317 (570)
+++|+.++.++.
T Consensus 575 ~~~a~~i~~~~~ 586 (657)
T PRK07201 575 EEAADMVVRAIV 586 (657)
T ss_pred HHHHHHHHHHHH
Confidence 999999998775
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.42 E-value=6.9e-12 Score=138.69 Aligned_cols=220 Identities=15% Similarity=0.174 Sum_probs=144.1
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
...||+++||||+|.||.+++++|++.| .+|+++.|+... .+.+. ++. ..++.
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~ 318 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAG---DRLLIIDRDAEG---AKKLA-------------EAL--------GDEHL 318 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------HHh--------CCcee
Confidence 4579999999999999999999999998 678888886421 11111 111 24566
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHH-cc
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKK-CV 152 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f--------~~~~~~~~~~Nv~gt~~ll~la~~-~~ 152 (570)
.+.+|++++ +..+.++ ..+|++||+||.... .+.++..+++|+.|+.++++.+.. +.
T Consensus 319 ~~~~D~~~~-------~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 391 (520)
T PRK06484 319 SVQADITDE-------AAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS 391 (520)
T ss_pred EEEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc
Confidence 789999954 2222322 358999999997521 134667799999999999998765 33
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|++||....... +....|+
T Consensus 392 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 415 (520)
T PRK06484 392 QGGVIVNLGSIASLLAL--------------------------------------------------------PPRNAYC 415 (520)
T ss_pred cCCEEEEECchhhcCCC--------------------------------------------------------CCCchhH
Confidence 34589999997543221 1135799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+++.. ..++++..+.|+.|.++...... +. .. .......+.. + ...+...+|
T Consensus 416 asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~---~~--~~-~~~~~~~~~~----~-----~~~~~~~~d 480 (520)
T PRK06484 416 ASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALK---AS--GR-ADFDSIRRRI----P-----LGRLGDPEE 480 (520)
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhc---cc--cH-HHHHHHHhcC----C-----CCCCcCHHH
Confidence 9999999988765 34799999999999776432110 00 00 0011111111 0 112357899
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++.++.... ..-.++++.+.++
T Consensus 481 ia~~~~~l~s~~~-~~~~G~~i~vdgg 506 (520)
T PRK06484 481 VAEAIAFLASPAA-SYVNGATLTVDGG 506 (520)
T ss_pred HHHHHHHHhCccc-cCccCcEEEECCC
Confidence 9999998775322 2223678888765
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.4e-11 Score=120.70 Aligned_cols=196 Identities=15% Similarity=0.157 Sum_probs=131.5
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++++||||||+||++++++|++.| .+|+++.|+... .+++. ..++..+.+
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G---~~v~~~~r~~~~---~~~~~------------------------~~~~~~~~~ 51 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADG---WRVIATARDAAA---LAALQ------------------------ALGAEALAL 51 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCC---CEEEEEECCHHH---HHHHH------------------------hccceEEEe
Confidence 689999999999999999999988 577888886432 12221 123557899
Q ss_pred cCCCCCCCCCchhhHHHH---hC--CccEEEEcCccCCc---------cccHHHHHHHhHHHHHHHHHHHHHc--cCceE
Q 008324 93 DISSEDLGLKDSNLKEEL---WN--ELDIMVNSAAITKF---------DERYDVAFGINTLGVIHLVNFAKKC--VKLKV 156 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l---~~--~vdiViH~AA~v~f---------~~~~~~~~~~Nv~gt~~ll~la~~~--~~l~~ 156 (570)
|++++ +..+.+ +. .+|+|||+|+.... .+.++..+++|+.|+.++++.+.+. ..-.+
T Consensus 52 D~~~~-------~~v~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ 124 (222)
T PRK06953 52 DVADP-------ASVAGLAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGV 124 (222)
T ss_pred cCCCH-------HHHHHHHHHhcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCe
Confidence 99964 222232 22 48999999997521 2345778999999999999988752 12246
Q ss_pred EEEEeccee-ecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHH
Q 008324 157 FVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (570)
Q Consensus 157 ~V~vSTa~v-~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
+|++||... .+... . .....|+.+|
T Consensus 125 iv~isS~~~~~~~~~-------~-----------------------------------------------~~~~~Y~~sK 150 (222)
T PRK06953 125 LAVLSSRMGSIGDAT-------G-----------------------------------------------TTGWLYRASK 150 (222)
T ss_pred EEEEcCccccccccc-------C-----------------------------------------------CCccccHHhH
Confidence 888887643 22110 0 0113599999
Q ss_pred HHHHHHHHHh---ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHH
Q 008324 236 TMGEMLMQQS---KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (570)
Q Consensus 236 ~~aE~lv~~~---~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ai 312 (570)
+..+.+++.. ..+++++.++|+.|..+... + ...++.++.+..+
T Consensus 151 ~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~-----------------------------~----~~~~~~~~~~~~~ 197 (222)
T PRK06953 151 AALNDALRAASLQARHATCIALHPGWVRTDMGG-----------------------------A----QAALDPAQSVAGM 197 (222)
T ss_pred HHHHHHHHHHhhhccCcEEEEECCCeeecCCCC-----------------------------C----CCCCCHHHHHHHH
Confidence 9999998876 34688999999988765321 0 0125678888888
Q ss_pred HHHHHHhhCCCCCCceEEecC
Q 008324 313 IVAMVAHAKQPSDANIYHVGS 333 (570)
Q Consensus 313 i~a~~~~~~~~~~~~iyni~s 333 (570)
+.++.... ....+..|+..+
T Consensus 198 ~~~~~~~~-~~~~~~~~~~~~ 217 (222)
T PRK06953 198 RRVIAQAT-RRDNGRFFQYDG 217 (222)
T ss_pred HHHHHhcC-cccCceEEeeCC
Confidence 88776442 233456666554
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.5e-12 Score=127.66 Aligned_cols=158 Identities=16% Similarity=0.173 Sum_probs=112.3
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|+||||||+||++++++|++.| .+|.++.|+..... . .. ...++.++.+
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G---~~v~~~~r~~~~~~-----~-------------~~--------~~~~~~~~~~ 52 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPG---IAVLGVARSRHPSL-----A-------------AA--------AGERLAEVEL 52 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCC---CEEEEEecCcchhh-----h-------------hc--------cCCeEEEEEe
Confidence 589999999999999999999988 57788888754210 0 00 1246888999
Q ss_pred cCCCCCCCCCchhhHHH-----Hh------CCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHHc--
Q 008324 93 DISSEDLGLKDSNLKEE-----LW------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC-- 151 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~-----l~------~~vdiViH~AA~v~f--------~~~~~~~~~~Nv~gt~~ll~la~~~-- 151 (570)
|+++++ ..+. +. ..+|++||+|+.... .+.++..+++|+.|+..+.+.+.+.
T Consensus 53 D~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 125 (243)
T PRK07023 53 DLSDAA-------AAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAAS 125 (243)
T ss_pred ccCCHH-------HHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhh
Confidence 999642 2222 11 147999999997532 1345677899999988776666542
Q ss_pred -cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+..++|++||....... .....
T Consensus 126 ~~~~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 149 (243)
T PRK07023 126 DAAERRILHISSGAARNAY--------------------------------------------------------AGWSV 149 (243)
T ss_pred ccCCCEEEEEeChhhcCCC--------------------------------------------------------CCchH
Confidence 235689999997543211 12357
Q ss_pred HHHHHHHHHHHHHHh----ccCCcEEEEecCceecC
Q 008324 231 YVFTKTMGEMLMQQS----KENLSLVIIRPTVVSGT 262 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~----~~~lp~~IvRPsiV~g~ 262 (570)
|+.+|+..|.+++.+ ..++++.+++|+.+-++
T Consensus 150 Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~ 185 (243)
T PRK07023 150 YCATKAALDHHARAVALDANRALRIVSLAPGVVDTG 185 (243)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence 999999999999866 24799999999988654
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.1e-11 Score=115.36 Aligned_cols=164 Identities=16% Similarity=0.167 Sum_probs=114.2
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++++||||||++|.+++++|++.+. ..|+++.|+.......... ++.+++. ..++.++.+
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~--~~v~~~~r~~~~~~~~~~~---------~~~~~~~---------~~~~~~~~~ 60 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGA--RHLVLLSRSGPDAPGAAEL---------LAELEAL---------GAEVTVVAC 60 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhC--CeEEEEeCCCCCCccHHHH---------HHHHHhc---------CCeEEEEEC
Confidence 5799999999999999999998774 3577788865433211110 1111111 256788999
Q ss_pred cCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHccCceEEE
Q 008324 93 DISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V 158 (570)
|++++ +..+.++ ..+|+|||+|+.... .+.++..+++|+.|+.++++++++. +.+++|
T Consensus 61 D~~~~-------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~ii 132 (180)
T smart00822 61 DVADR-------AALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL-PLDFFV 132 (180)
T ss_pred CCCCH-------HHHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC-CcceEE
Confidence 99853 2222332 347999999996532 1345677899999999999999774 678899
Q ss_pred EEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHH
Q 008324 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (570)
Q Consensus 159 ~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~a 238 (570)
++||....-.. .....|+.+|...
T Consensus 133 ~~ss~~~~~~~--------------------------------------------------------~~~~~y~~sk~~~ 156 (180)
T smart00822 133 LFSSVAGVLGN--------------------------------------------------------PGQANYAAANAFL 156 (180)
T ss_pred EEccHHHhcCC--------------------------------------------------------CCchhhHHHHHHH
Confidence 99886432111 1124699999999
Q ss_pred HHHHHHh-ccCCcEEEEecCcee
Q 008324 239 EMLMQQS-KENLSLVIIRPTVVS 260 (570)
Q Consensus 239 E~lv~~~-~~~lp~~IvRPsiV~ 260 (570)
+.++... ..+++++.+.|+.+-
T Consensus 157 ~~~~~~~~~~~~~~~~~~~g~~~ 179 (180)
T smart00822 157 DALAAHRRARGLPATSINWGAWA 179 (180)
T ss_pred HHHHHHHHhcCCceEEEeecccc
Confidence 9998765 568999999888653
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.3e-11 Score=123.52 Aligned_cols=222 Identities=17% Similarity=0.113 Sum_probs=138.0
Q ss_pred cCCCEEEEECCc--chhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 10 LENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaT--GFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||+++||||+ +-||+.++++|++.| .+|++..|+.+ ..+.+. ++ . ..++
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G---~~Vi~~~r~~~---~~~~~~-~~---------~-----------~~~~ 57 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQG---ATVIYTYQNDR---MKKSLQ-KL---------V-----------DEED 57 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCC---CEEEEecCchH---HHHHHH-hh---------c-----------cCce
Confidence 679999999999 789999999999998 67788777521 111111 11 0 1357
Q ss_pred EEEeccCCCCCCCCCchhhHHHH---hCCccEEEEcCccCC-------c----cccHHHHHHHhHHHHHHHHHHHHH-cc
Q 008324 88 TFVPGDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITK-------F----DERYDVAFGINTLGVIHLVNFAKK-CV 152 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l---~~~vdiViH~AA~v~-------f----~~~~~~~~~~Nv~gt~~ll~la~~-~~ 152 (570)
.++.+|+++++-- .+..+.+ ..++|++||+||... + .+.++..+++|+.|+..+.+.+.. +.
T Consensus 58 ~~~~~Dl~~~~~v---~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~ 134 (252)
T PRK06079 58 LLVECDVASDESI---ERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLN 134 (252)
T ss_pred eEEeCCCCCHHHH---HHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcc
Confidence 7899999964210 1111122 245899999998642 1 134667789999999999888765 32
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|++||....... +....|+
T Consensus 135 ~~g~Iv~iss~~~~~~~--------------------------------------------------------~~~~~Y~ 158 (252)
T PRK06079 135 PGASIVTLTYFGSERAI--------------------------------------------------------PNYNVMG 158 (252)
T ss_pred cCceEEEEeccCccccC--------------------------------------------------------CcchhhH
Confidence 33578888875322110 1135699
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.. ..++.+..+.|+.|-.+... .+. ............ .+ ...+...+|
T Consensus 159 asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~---~~~----~~~~~~~~~~~~----~p-----~~r~~~ped 222 (252)
T PRK06079 159 IAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVT---GIK----GHKDLLKESDSR----TV-----DGVGVTIEE 222 (252)
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccc---cCC----ChHHHHHHHHhc----Cc-----ccCCCCHHH
Confidence 9999999988754 35799999999999765321 111 011111111111 01 112466799
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++++..++...... -.+++..+.++
T Consensus 223 va~~~~~l~s~~~~~-itG~~i~vdgg 248 (252)
T PRK06079 223 VGNTAAFLLSDLSTG-VTGDIIYVDKG 248 (252)
T ss_pred HHHHHHHHhCccccc-ccccEEEeCCc
Confidence 999999887532221 12556655444
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.5e-11 Score=122.67 Aligned_cols=166 Identities=19% Similarity=0.230 Sum_probs=111.4
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+++||||||+||.++++.|++.| .+|+++.|+... .+.+.++ ++.. + ...+..+.+
T Consensus 1 k~vlItGas~giG~~la~~la~~G---~~vv~~~r~~~~---~~~~~~~---------~~~~-~-------~~~~~~~~~ 57 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQG---AELFLTDRDADG---LAQTVAD---------ARAL-G-------GTVPEHRAL 57 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHhc-C-------CCcceEEEe
Confidence 579999999999999999999988 567788876422 1111111 1111 0 123456789
Q ss_pred cCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c---cCc
Q 008324 93 DISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C---VKL 154 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~---~~l 154 (570)
|+++++ ..+.+ ...+|+|||+||.... .+.++..+++|+.|+.++++.+.. + +..
T Consensus 58 D~~~~~-------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~ 130 (272)
T PRK07832 58 DISDYD-------AVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRG 130 (272)
T ss_pred eCCCHH-------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC
Confidence 999542 22222 2358999999986432 134567799999999999998753 1 123
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||....... +....|+.|
T Consensus 131 g~ii~isS~~~~~~~--------------------------------------------------------~~~~~Y~~s 154 (272)
T PRK07832 131 GHLVNVSSAAGLVAL--------------------------------------------------------PWHAAYSAS 154 (272)
T ss_pred cEEEEEccccccCCC--------------------------------------------------------CCCcchHHH
Confidence 589999986432110 123469999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceecCCC
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYK 264 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ 264 (570)
|+..+.+.+.. ..++++++++|+.|.++..
T Consensus 155 K~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~ 189 (272)
T PRK07832 155 KFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLV 189 (272)
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcch
Confidence 98776665433 4579999999999987654
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.1e-11 Score=124.96 Aligned_cols=229 Identities=10% Similarity=0.051 Sum_probs=140.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|.||++++++|++.| .+|++..|+... .+.+.++ +++.. ..++.+
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------~~~~~--------~~~~~~ 62 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARAG---ADVILLSRNEEN---LKKAREK---------IKSES--------NVDVSY 62 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHhhc--------CCceEE
Confidence 679999999999999999999999998 678888886432 1222111 11111 246889
Q ss_pred EeccCCCCCCCCCchhhHHHHh------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--cC
Q 008324 90 VPGDISSEDLGLKDSNLKEELW------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~ 153 (570)
+.+|++++ +..+.++ ..+|++||+||.... .+.++..+++|+.|+..+.+.+.. + ++
T Consensus 63 ~~~Dv~~~-------~~i~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~ 135 (263)
T PRK08339 63 IVADLTKR-------EDLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG 135 (263)
T ss_pred EEecCCCH-------HHHHHHHHHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 99999954 2233333 358999999986432 245777899999987777665543 2 24
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||....... +....|+.
T Consensus 136 ~g~Ii~isS~~~~~~~--------------------------------------------------------~~~~~y~a 159 (263)
T PRK08339 136 FGRIIYSTSVAIKEPI--------------------------------------------------------PNIALSNV 159 (263)
T ss_pred CCEEEEEcCccccCCC--------------------------------------------------------CcchhhHH
Confidence 4689999997643211 11246889
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCC-ccccCc-cchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFP-GWVEDL-KTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~-gw~~~~-~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+|+..+.+.+.. ..++.+..+.|+.|-.+...... ...... ............. . ....+...+
T Consensus 160 sKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----p~~r~~~p~ 230 (263)
T PRK08339 160 VRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKP----I-----PLGRLGEPE 230 (263)
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhcc----C-----CcccCcCHH
Confidence 999888877654 35799999999998664321000 000000 0000111111110 0 112345679
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+++++..++...... -.++++.+.++
T Consensus 231 dva~~v~fL~s~~~~~-itG~~~~vdgG 257 (263)
T PRK08339 231 EIGYLVAFLASDLGSY-INGAMIPVDGG 257 (263)
T ss_pred HHHHHHHHHhcchhcC-ccCceEEECCC
Confidence 9999998877533221 23667777665
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.4e-11 Score=121.72 Aligned_cols=164 Identities=12% Similarity=0.124 Sum_probs=111.1
Q ss_pred EEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccC
Q 008324 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (570)
Q Consensus 15 VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl 94 (570)
|+||||||+||+++++.|++.| .+|+++.|+.... .+.+. +.++.. ..++.++.+|+
T Consensus 1 vlItGas~giG~~~a~~l~~~G---~~v~~~~~~~~~~--~~~~~---------~~l~~~---------~~~~~~~~~Dl 57 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADG---FEICVHYHSGRSD--AESVV---------SAIQAQ---------GGNARLLQFDV 57 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCCHHH--HHHHH---------HHHHHc---------CCeEEEEEccC
Confidence 6899999999999999999998 5677777754221 11111 111111 25688999999
Q ss_pred CCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHH-Hc---cCceE
Q 008324 95 SSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAK-KC---VKLKV 156 (570)
Q Consensus 95 ~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~-~~---~~l~~ 156 (570)
+++ +..+.++ ..+|++||+||.... .+.++..+++|+.|+.++++.+. .+ .+..+
T Consensus 58 ~~~-------~~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~ 130 (239)
T TIGR01831 58 ADR-------VACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGR 130 (239)
T ss_pred CCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeE
Confidence 964 2222222 357999999986431 24466779999999999988652 21 24468
Q ss_pred EEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHH
Q 008324 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (570)
Q Consensus 157 ~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+|++||....... +....|+.||+
T Consensus 131 iv~vsS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~ 154 (239)
T TIGR01831 131 IITLASVSGVMGN--------------------------------------------------------RGQVNYSAAKA 154 (239)
T ss_pred EEEEcchhhccCC--------------------------------------------------------CCCcchHHHHH
Confidence 9999986432211 11245999999
Q ss_pred HHHHHHHHh-----ccCCcEEEEecCceecCCC
Q 008324 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYK 264 (570)
Q Consensus 237 ~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ 264 (570)
..+.+.+.. ..+++++.++|+.|.++..
T Consensus 155 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 187 (239)
T TIGR01831 155 GLIGATKALAVELAKRKITVNCIAPGLIDTEML 187 (239)
T ss_pred HHHHHHHHHHHHHhHhCeEEEEEEEccCccccc
Confidence 877776544 3579999999999987654
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.5e-11 Score=121.90 Aligned_cols=220 Identities=15% Similarity=0.148 Sum_probs=136.7
Q ss_pred cCCCEEEEECCc--chhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 10 LENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaT--GFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||+++||||+ +-||++++++|++.| .+|++..|+.+.....+++. ++. +.+
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~G---~~v~l~~r~~~~~~~~~~~~-------------~~~---------~~~ 62 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRALG---AELAVTYLNDKARPYVEPLA-------------EEL---------DAP 62 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcC---CEEEEEeCChhhHHHHHHHH-------------Hhh---------ccc
Confidence 579999999998 489999999999998 57788888643221122221 111 234
Q ss_pred EEEeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc-----------cccHHHHHHHhHHHHHHHHHHHH
Q 008324 88 TFVPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAK 149 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f-----------~~~~~~~~~~Nv~gt~~ll~la~ 149 (570)
.++.+|+++++ ..+.+ ...+|++||+||.... .+.++..+++|+.|+..+.+.+.
T Consensus 63 ~~~~~D~~~~~-------~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~ 135 (258)
T PRK07533 63 IFLPLDVREPG-------QLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAE 135 (258)
T ss_pred eEEecCcCCHH-------HHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 57889999642 22222 2458999999986421 13467789999999999998775
Q ss_pred H-ccCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 008324 150 K-CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (570)
Q Consensus 150 ~-~~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
. +++-.++|.+||...... . +..
T Consensus 136 p~m~~~g~Ii~iss~~~~~~---------~-----------------------------------------------~~~ 159 (258)
T PRK07533 136 PLMTNGGSLLTMSYYGAEKV---------V-----------------------------------------------ENY 159 (258)
T ss_pred HHhccCCEEEEEeccccccC---------C-----------------------------------------------ccc
Confidence 4 332247888887532110 0 112
Q ss_pred chHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeee
Q 008324 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.. ..++.+..+.|+.|-.+..+... ............ .+ ...+.
T Consensus 160 ~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~----~p-----~~r~~ 223 (258)
T PRK07533 160 NLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGID-------DFDALLEDAAER----AP-----LRRLV 223 (258)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccC-------CcHHHHHHHHhc----CC-----cCCCC
Confidence 46999999988887754 35799999999988765322110 001111111111 00 11245
Q ss_pred ehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
..++++++++.++.+... .-.++++.+.++
T Consensus 224 ~p~dva~~~~~L~s~~~~-~itG~~i~vdgg 253 (258)
T PRK07533 224 DIDDVGAVAAFLASDAAR-RLTGNTLYIDGG 253 (258)
T ss_pred CHHHHHHHHHHHhChhhc-cccCcEEeeCCc
Confidence 679999999888753222 122566666544
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.4e-11 Score=125.67 Aligned_cols=224 Identities=16% Similarity=0.181 Sum_probs=136.9
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC------cccHHHHHHHHHhhhhhHHHHHhhhccccccc
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD------IDSAALRFQNEVLAKDVFNVLKEKWGTRLNSF 82 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~------~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~ 82 (570)
.++||+++||||+|.||.+++++|++.| .+|+++.|... .....+.+.++ ++..
T Consensus 3 ~l~~k~~lITGas~GIG~aia~~la~~G---~~vii~~~~~~~~~~~~~~~~~~~~~~~---------l~~~-------- 62 (286)
T PRK07791 3 LLDGRVVIVTGAGGGIGRAHALAFAAEG---ARVVVNDIGVGLDGSASGGSAAQAVVDE---------IVAA-------- 62 (286)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEeeCCccccccccchhHHHHHHHH---------HHhc--------
Confidence 4689999999999999999999999998 56777766531 11112222211 1110
Q ss_pred cCCceEEEeccCCCCCCCCCchhhHHHH---hCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c
Q 008324 83 ISEKITFVPGDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C 151 (570)
Q Consensus 83 ~~~kv~~v~gDl~~~~lgls~~~~~~~l---~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~ 151 (570)
..++.++.+|+++++-- .+..+.+ ...+|++||+||.... .+.++..+++|+.|+..+++++.. +
T Consensus 63 -~~~~~~~~~Dv~~~~~v---~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 138 (286)
T PRK07791 63 -GGEAVANGDDIADWDGA---ANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYW 138 (286)
T ss_pred -CCceEEEeCCCCCHHHH---HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 24677889999954210 1111122 2468999999997531 245677899999999999887753 1
Q ss_pred c-C-------ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccc
Q 008324 152 V-K-------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAK 223 (570)
Q Consensus 152 ~-~-------l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 223 (570)
. . -.++|++||.......
T Consensus 139 ~~~~~~~~~~~g~Iv~isS~~~~~~~------------------------------------------------------ 164 (286)
T PRK07791 139 RAESKAGRAVDARIINTSSGAGLQGS------------------------------------------------------ 164 (286)
T ss_pred HHhcccCCCCCcEEEEeCchhhCcCC------------------------------------------------------
Confidence 1 1 1479999986432211
Q ss_pred cCCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCe
Q 008324 224 LHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKV 298 (570)
Q Consensus 224 ~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~ 298 (570)
.....|+.||+..+.+++.. ..++.+..|.|+ +..+..+ . ........ . +..
T Consensus 165 --~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~-------~------~~~~~~~~-~------~~~ 221 (286)
T PRK07791 165 --VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTE-------T------VFAEMMAK-P------EEG 221 (286)
T ss_pred --CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcch-------h------hHHHHHhc-C------ccc
Confidence 11246999999998887754 357999999998 4322110 0 00000000 0 001
Q ss_pred eeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 299 IMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 299 ~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.......++++++++.++..... .-.++++.+.++
T Consensus 222 ~~~~~~pedva~~~~~L~s~~~~-~itG~~i~vdgG 256 (286)
T PRK07791 222 EFDAMAPENVSPLVVWLGSAESR-DVTGKVFEVEGG 256 (286)
T ss_pred ccCCCCHHHHHHHHHHHhCchhc-CCCCcEEEEcCC
Confidence 11245689999999987753222 223677777666
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.4e-11 Score=118.73 Aligned_cols=207 Identities=17% Similarity=0.276 Sum_probs=130.5
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+||||||+||++++++|++.++.+ .|.+..|+.... . ...++..+.+
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~-~v~~~~~~~~~~-----~------------------------~~~~~~~~~~ 50 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDA-TVHATYRHHKPD-----F------------------------QHDNVQWHAL 50 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCC-EEEEEccCCccc-----c------------------------ccCceEEEEe
Confidence 589999999999999999999987554 455555543211 0 0257788999
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc-------------ccHHHHHHHhHHHHHHHHHHHHH-cc--CceE
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-------------ERYDVAFGINTLGVIHLVNFAKK-CV--KLKV 156 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~-------------~~~~~~~~~Nv~gt~~ll~la~~-~~--~l~~ 156 (570)
|+++++ ..+.....++++|+|||+||..... +.+...+.+|+.|+..+.+.+.. +. +..+
T Consensus 51 Dls~~~----~~~~~~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~ 126 (235)
T PRK09009 51 DVTDEA----EIKQLSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAK 126 (235)
T ss_pred cCCCHH----HHHHHHHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCce
Confidence 999542 1111123345799999999986311 22456789999999988887765 32 2357
Q ss_pred EEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHH
Q 008324 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (570)
Q Consensus 157 ~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
++.+||.. +. +.+... +....|+.+|+
T Consensus 127 i~~iss~~--~~----~~~~~~-----------------------------------------------~~~~~Y~asK~ 153 (235)
T PRK09009 127 FAVISAKV--GS----ISDNRL-----------------------------------------------GGWYSYRASKA 153 (235)
T ss_pred EEEEeecc--cc----cccCCC-----------------------------------------------CCcchhhhhHH
Confidence 88888632 11 101101 11247999999
Q ss_pred HHHHHHHHhc-------cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHH
Q 008324 237 MGEMLMQQSK-------ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (570)
Q Consensus 237 ~aE~lv~~~~-------~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
..+.+++... .++.+..+.|+.|.++...+. ... . ....++..+++|
T Consensus 154 a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~~----~-----~~~~~~~~~~~a 207 (235)
T PRK09009 154 ALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF-----------------QQN----V-----PKGKLFTPEYVA 207 (235)
T ss_pred HHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch-----------------hhc----c-----ccCCCCCHHHHH
Confidence 9999887542 368888999998876543210 000 0 112246789999
Q ss_pred HHHHHHHHHhhCCCCCCceEEecC
Q 008324 310 NAMIVAMVAHAKQPSDANIYHVGS 333 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s 333 (570)
++++.++....... .+..+.+.+
T Consensus 208 ~~~~~l~~~~~~~~-~g~~~~~~g 230 (235)
T PRK09009 208 QCLLGIIANATPAQ-SGSFLAYDG 230 (235)
T ss_pred HHHHHHHHcCChhh-CCcEEeeCC
Confidence 99999886432211 245554433
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=6.1e-11 Score=119.10 Aligned_cols=223 Identities=15% Similarity=0.135 Sum_probs=139.2
Q ss_pred hhcCCCEEEEECCcc-hhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 8 EFLENKTILVSGVTG-FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 8 ~~~~~k~VlITGaTG-FlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
...+||+++||||+| -||..+++.|++.| .+|++..|..... +... +.+++..+ ..+
T Consensus 13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G---~~V~~~~~~~~~~---~~~~---------~~~~~~~~-------~~~ 70 (262)
T PRK07831 13 GLLAGKVVLVTAAAGTGIGSATARRALEEG---ARVVISDIHERRL---GETA---------DELAAELG-------LGR 70 (262)
T ss_pred cccCCCEEEEECCCcccHHHHHHHHHHHcC---CEEEEEeCCHHHH---HHHH---------HHHHHhcC-------Cce
Confidence 356789999999998 59999999999998 4577777754321 1111 11222111 146
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCC---c----cccHHHHHHHhHHHHHHHHHHHHHc-
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK---F----DERYDVAFGINTLGVIHLVNFAKKC- 151 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~---f----~~~~~~~~~~Nv~gt~~ll~la~~~- 151 (570)
+..+.+|++++ +..+.++ ..+|+|||+||... + .+.+...+++|+.|+..+++.+...
T Consensus 71 ~~~~~~Dl~~~-------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 143 (262)
T PRK07831 71 VEAVVCDVTSE-------AQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYM 143 (262)
T ss_pred EEEEEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 78899999953 3233332 36899999999642 1 1346677899999999998877542
Q ss_pred c--C-ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 008324 152 V--K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (570)
Q Consensus 152 ~--~-l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
. + -.++|.+||....... ...
T Consensus 144 ~~~~~~g~iv~~ss~~~~~~~--------------------------------------------------------~~~ 167 (262)
T PRK07831 144 RARGHGGVIVNNASVLGWRAQ--------------------------------------------------------HGQ 167 (262)
T ss_pred HhcCCCcEEEEeCchhhcCCC--------------------------------------------------------CCC
Confidence 1 1 3467887775422110 112
Q ss_pred chHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeee
Q 008324 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..|.+++.+ ..++++.+++|+.+..+..+- . . ............. ..-+.
T Consensus 168 ~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~---~----~-~~~~~~~~~~~~~---------~~r~~ 230 (262)
T PRK07831 168 AHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAK---V----T-SAELLDELAAREA---------FGRAA 230 (262)
T ss_pred cchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccc---c----c-CHHHHHHHHhcCC---------CCCCc
Confidence 46999999999998765 357999999999998764311 0 0 1111111111110 11245
Q ss_pred ehHHHHHHHHHHHHHhhCCCCCCceEEecC
Q 008324 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGS 333 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s 333 (570)
..++++++++..+..... .-.++++.+.+
T Consensus 231 ~p~~va~~~~~l~s~~~~-~itG~~i~v~~ 259 (262)
T PRK07831 231 EPWEVANVIAFLASDYSS-YLTGEVVSVSS 259 (262)
T ss_pred CHHHHHHHHHHHcCchhc-CcCCceEEeCC
Confidence 678999999887753322 12256666554
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=9.3e-12 Score=125.17 Aligned_cols=168 Identities=14% Similarity=0.138 Sum_probs=114.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||++++++|++.| .+|+++.|+.... +... +.+++..+ ..++..
T Consensus 6 l~~k~~lItGas~giG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~---------~~~~~~~~-------~~~~~~ 63 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLATVELLLEAG---ASVAICGRDEERL---ASAE---------ARLREKFP-------GARLLA 63 (265)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeCCHHHH---HHHH---------HHHHhhCC-------CceEEE
Confidence 579999999999999999999999998 5788888865321 1111 11222211 136788
Q ss_pred EeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--c
Q 008324 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~ 152 (570)
+.+|++++ +..+.+ ...+|+|||+||.... .+.+...+++|+.|...+++.+.. + .
T Consensus 64 ~~~D~~~~-------~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 136 (265)
T PRK07062 64 ARCDVLDE-------ADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRAS 136 (265)
T ss_pred EEecCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc
Confidence 99999953 322222 2458999999996432 134667788999988777766543 2 1
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... +....|+
T Consensus 137 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~y~ 160 (265)
T PRK07062 137 AAASIVCVNSLLALQPE--------------------------------------------------------PHMVATS 160 (265)
T ss_pred CCcEEEEeccccccCCC--------------------------------------------------------CCchHhH
Confidence 34689999987543211 1123588
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecC
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGT 262 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
.+|+..+.+.+.. ..+++++.++|+.|-.+
T Consensus 161 asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~ 195 (265)
T PRK07062 161 AARAGLLNLVKSLATELAPKGVRVNSILLGLVESG 195 (265)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccc
Confidence 8888777766543 35799999999998764
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.2e-11 Score=117.17 Aligned_cols=183 Identities=18% Similarity=0.294 Sum_probs=124.1
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+++||||+|.||++++++|++. .+|+++.|+.. .+.+
T Consensus 1 ~~vlItGas~giG~~la~~l~~~----~~vi~~~r~~~--------------------------------------~~~~ 38 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR----HEVITAGRSSG--------------------------------------DVQV 38 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc----CcEEEEecCCC--------------------------------------ceEe
Confidence 47999999999999999999876 46777777531 2468
Q ss_pred cCCCCCCCCCchhhHHHHhC---CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-ccCceEEEEEe
Q 008324 93 DISSEDLGLKDSNLKEELWN---ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-CVKLKVFVHVS 161 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~---~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~~~l~~~V~vS 161 (570)
|+++ .+..+.+++ ++|+|||+||...+ .+.+...+++|+.|+.++++++.. +.+-.+++++|
T Consensus 39 D~~~-------~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 111 (199)
T PRK07578 39 DITD-------PASIRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTS 111 (199)
T ss_pred cCCC-------hHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEc
Confidence 9984 333334433 68999999997532 234666789999999999998865 33345788888
Q ss_pred cceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHH
Q 008324 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (570)
Q Consensus 162 Ta~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~l 241 (570)
|....... +....|+.||+..+.+
T Consensus 112 s~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~~ 135 (199)
T PRK07578 112 GILSDEPI--------------------------------------------------------PGGASAATVNGALEGF 135 (199)
T ss_pred ccccCCCC--------------------------------------------------------CCchHHHHHHHHHHHH
Confidence 76532110 1124799999998888
Q ss_pred HHHh----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHH
Q 008324 242 MQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (570)
Q Consensus 242 v~~~----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~ 317 (570)
++.. ..++.+..+.|+.|-.+... . + ..+++ ...++.+++|++++.++.
T Consensus 136 ~~~la~e~~~gi~v~~i~Pg~v~t~~~~------------------~--~--~~~~~-----~~~~~~~~~a~~~~~~~~ 188 (199)
T PRK07578 136 VKAAALELPRGIRINVVSPTVLTESLEK------------------Y--G--PFFPG-----FEPVPAARVALAYVRSVE 188 (199)
T ss_pred HHHHHHHccCCeEEEEEcCCcccCchhh------------------h--h--hcCCC-----CCCCCHHHHHHHHHHHhc
Confidence 7754 34788899999877443110 0 0 00111 235799999999988875
Q ss_pred HhhCCCCCCceEEe
Q 008324 318 AHAKQPSDANIYHV 331 (570)
Q Consensus 318 ~~~~~~~~~~iyni 331 (570)
. ...++++++
T Consensus 189 ~----~~~g~~~~~ 198 (199)
T PRK07578 189 G----AQTGEVYKV 198 (199)
T ss_pred c----ceeeEEecc
Confidence 2 223567765
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.4e-11 Score=121.91 Aligned_cols=222 Identities=13% Similarity=0.095 Sum_probs=133.7
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||.++++.|++.| .+|++..|+.... .+.+.+ .++.. ..++..
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G---~~vvi~~~~~~~~--~~~~~~---------~l~~~---------~~~~~~ 61 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEK---AKVVINYRSDEEE--ANDVAE---------EIKKA---------GGEAIA 61 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCCHHH--HHHHHH---------HHHHc---------CCeEEE
Confidence 679999999999999999999999988 5667777743211 111111 11110 246778
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCC---c----cccHHHHHHHhHHHHHHHHHHH----HHc
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK---F----DERYDVAFGINTLGVIHLVNFA----KKC 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~---f----~~~~~~~~~~Nv~gt~~ll~la----~~~ 151 (570)
+.+|++++ +....++ ..+|++||+|+... + .+.++..+++|+.|+..+++.+ ++.
T Consensus 62 ~~~Dl~~~-------~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~ 134 (261)
T PRK08936 62 VKGDVTVE-------SDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEH 134 (261)
T ss_pred EEecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 99999953 2222332 35899999999743 1 1345667899998887665543 332
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
..-.++|++||....... +....|
T Consensus 135 ~~~g~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y 158 (261)
T PRK08936 135 DIKGNIINMSSVHEQIPW--------------------------------------------------------PLFVHY 158 (261)
T ss_pred CCCcEEEEEccccccCCC--------------------------------------------------------CCCccc
Confidence 123589999986422110 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.. ..+++++.++|+.|.++.... .+.... ......... + ...+...+
T Consensus 159 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~------~~~~~~-~~~~~~~~~----~-----~~~~~~~~ 222 (261)
T PRK08936 159 AASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAE------KFADPK-QRADVESMI----P-----MGYIGKPE 222 (261)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCcccc------ccCCHH-HHHHHHhcC----C-----CCCCcCHH
Confidence 99997776666543 357999999999998764321 001111 111111110 1 11345678
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++++..++..... .-.+.++.+.++
T Consensus 223 ~va~~~~~l~s~~~~-~~~G~~i~~d~g 249 (261)
T PRK08936 223 EIAAVAAWLASSEAS-YVTGITLFADGG 249 (261)
T ss_pred HHHHHHHHHcCcccC-CccCcEEEECCC
Confidence 999998887753222 122455555444
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=9.4e-12 Score=123.97 Aligned_cols=161 Identities=16% Similarity=0.208 Sum_probs=108.6
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+||||||+||+.++++|++.| .+|+++.|.+.. ++. ++ .+. ...++..+.+
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g---~~V~~~~r~~~~-----~~~-~~---------~~~--------~~~~~~~~~~ 55 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKG---THVISISRTENK-----ELT-KL---------AEQ--------YNSNLTFHSL 55 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcC---CEEEEEeCCchH-----HHH-HH---------Hhc--------cCCceEEEEe
Confidence 689999999999999999999988 577888886521 111 11 000 1256788999
Q ss_pred cCCCCCCCCCchhhHHHHhCC---------c--cEEEEcCccCCc----c----ccHHHHHHHhHHHHHHHHHHHHH-c-
Q 008324 93 DISSEDLGLKDSNLKEELWNE---------L--DIMVNSAAITKF----D----ERYDVAFGINTLGVIHLVNFAKK-C- 151 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~---------v--diViH~AA~v~f----~----~~~~~~~~~Nv~gt~~ll~la~~-~- 151 (570)
|++++ +..+.++++ . .++||+||.... . +.+...+++|+.|+..+++.+.. +
T Consensus 56 D~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 128 (251)
T PRK06924 56 DLQDV-------HELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTK 128 (251)
T ss_pred cCCCH-------HHHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHh
Confidence 99953 333333322 1 278999987532 1 33566788899997777665543 2
Q ss_pred --cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc
Q 008324 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (570)
Q Consensus 152 --~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
.+..++|++||..+... + +...
T Consensus 129 ~~~~~~~iv~~sS~~~~~~---------~-----------------------------------------------~~~~ 152 (251)
T PRK06924 129 DWKVDKRVINISSGAAKNP---------Y-----------------------------------------------FGWS 152 (251)
T ss_pred ccCCCceEEEecchhhcCC---------C-----------------------------------------------CCcH
Confidence 23458999999654211 1 1235
Q ss_pred hHHHHHHHHHHHHHHh-------ccCCcEEEEecCceecC
Q 008324 230 TYVFTKTMGEMLMQQS-------KENLSLVIIRPTVVSGT 262 (570)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-------~~~lp~~IvRPsiV~g~ 262 (570)
.|+.+|+..|.+++.+ ..++.+..++|+.|-++
T Consensus 153 ~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~ 192 (251)
T PRK06924 153 AYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTN 192 (251)
T ss_pred HHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccH
Confidence 7999999999998754 13688999999988654
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=2e-11 Score=132.67 Aligned_cols=164 Identities=18% Similarity=0.177 Sum_probs=114.2
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
..+|++++||||+|+||..+++.|++.| .+|+++.|+..... .+.+. ++ -+..
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~G---a~vi~~~~~~~~~~-l~~~~-------------~~----------~~~~ 259 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDG---AHVVCLDVPAAGEA-LAAVA-------------NR----------VGGT 259 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCC---CEEEEEeCCccHHH-HHHHH-------------HH----------cCCe
Confidence 4578999999999999999999999988 57788877543221 11111 11 1234
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~--- 151 (570)
.+.+|++++ +..+.++ ..+|+|||+|+.... .+.++..+++|+.|+.++.+.+...
T Consensus 260 ~~~~Dv~~~-------~~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~ 332 (450)
T PRK08261 260 ALALDITAP-------DAPARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGAL 332 (450)
T ss_pred EEEEeCCCH-------HHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhh
Confidence 678899953 3222322 258999999997642 2456778899999999999998763
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.+||++||........ ....|
T Consensus 333 ~~~g~iv~~SS~~~~~g~~--------------------------------------------------------~~~~Y 356 (450)
T PRK08261 333 GDGGRIVGVSSISGIAGNR--------------------------------------------------------GQTNY 356 (450)
T ss_pred cCCCEEEEECChhhcCCCC--------------------------------------------------------CChHH
Confidence 1236899999875432111 12469
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecC
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGT 262 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
+.+|+..+.+++.+ ..++++..+.|+.|-.+
T Consensus 357 ~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~ 392 (450)
T PRK08261 357 AASKAGVIGLVQALAPLLAERGITINAVAPGFIETQ 392 (450)
T ss_pred HHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcch
Confidence 99999777766544 35799999999987653
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.3e-11 Score=121.85 Aligned_cols=219 Identities=16% Similarity=0.136 Sum_probs=134.4
Q ss_pred cCCCEEEEECCcc--hhHHHHHHHHHHhCCCccEEEEEEcCCCc--------ccHHHHHHHHHhhhhhHHHHHhhhcccc
Q 008324 10 LENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADI--------DSAALRFQNEVLAKDVFNVLKEKWGTRL 79 (570)
Q Consensus 10 ~~~k~VlITGaTG--FlG~~LvekLl~~~~~V~~V~~lvR~~~~--------~~~~~rl~~~l~~~~~f~~l~~~~~~~~ 79 (570)
++||+|+|||||| .||++++++|++.| .+|++..|.... ....+++. +.+++
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G---~~vi~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~------ 65 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAG---ADIFFTYWTAYDKEMPWGVDQDEQIQLQ---------EELLK------ 65 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCC---CeEEEEecccccccccccccHHHHHHHH---------HHHHh------
Confidence 6799999999995 79999999999998 466666443211 11111111 11111
Q ss_pred ccccCCceEEEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHH
Q 008324 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLV 145 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll 145 (570)
...++.++.+|+++++ ..+.++ ..+|+|||+||.... .+.++..+++|+.|...+.
T Consensus 66 ---~g~~~~~~~~D~~~~~-------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~ 135 (256)
T PRK12859 66 ---NGVKVSSMELDLTQND-------APKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLS 135 (256)
T ss_pred ---cCCeEEEEEcCCCCHH-------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence 0246788999999542 222222 358999999997532 1345667899999998886
Q ss_pred HHHH-Hcc--CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhcccccc
Q 008324 146 NFAK-KCV--KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERA 222 (570)
Q Consensus 146 ~la~-~~~--~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 222 (570)
+.+. .+. +-.++|++||.......
T Consensus 136 ~~~~~~~~~~~~g~iv~isS~~~~~~~----------------------------------------------------- 162 (256)
T PRK12859 136 SQFARGFDKKSGGRIINMTSGQFQGPM----------------------------------------------------- 162 (256)
T ss_pred HHHHHHHhhcCCeEEEEEcccccCCCC-----------------------------------------------------
Confidence 5443 332 34589999997532110
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCC
Q 008324 223 KLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETK 297 (570)
Q Consensus 223 ~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~ 297 (570)
+....|+.||+..+.+.+.. ..+++++.++|+.|-++... + . +...... ..+
T Consensus 163 ---~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~------~------~-~~~~~~~---~~~---- 219 (256)
T PRK12859 163 ---VGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT------E------E-IKQGLLP---MFP---- 219 (256)
T ss_pred ---CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC------H------H-HHHHHHh---cCC----
Confidence 12357999999999998765 35799999999988664211 0 0 1110010 011
Q ss_pred eeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 298 VIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 298 ~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
...+...+|++++++.++.... ..-.++++.+.++
T Consensus 220 -~~~~~~~~d~a~~~~~l~s~~~-~~~~G~~i~~dgg 254 (256)
T PRK12859 220 -FGRIGEPKDAARLIKFLASEEA-EWITGQIIHSEGG 254 (256)
T ss_pred -CCCCcCHHHHHHHHHHHhCccc-cCccCcEEEeCCC
Confidence 1123567999999988764221 2223566666544
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=8.8e-12 Score=123.13 Aligned_cols=212 Identities=10% Similarity=0.034 Sum_probs=133.0
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+++||||+|+||++++++|++.| .+|+++.|+.... .+.+. ..++.++.
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~--~~~~~------------------------~~~~~~~~ 52 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQG---QPVIVSYRTHYPA--IDGLR------------------------QAGAQCIQ 52 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCC---CeEEEEeCCchhH--HHHHH------------------------HcCCEEEE
Confidence 5799999999999999999999988 6788888865321 11111 02356889
Q ss_pred ccCCCCCCCCCchhhHHHH---hCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc-c--C--ceE
Q 008324 92 GDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-V--K--LKV 156 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l---~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~-~--~--l~~ 156 (570)
+|+++++-- ....+.+ ...+|++||+||.... .+.++..+++|+.|+..+.+.+... . + -.+
T Consensus 53 ~D~~~~~~~---~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~ 129 (236)
T PRK06483 53 ADFSTNAGI---MAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASD 129 (236)
T ss_pred cCCCCHHHH---HHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCce
Confidence 999954210 1111122 2358999999986421 2446778899999998887766552 1 1 347
Q ss_pred EEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHH
Q 008324 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (570)
Q Consensus 157 ~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+|++||....... .....|+.||+
T Consensus 130 iv~~ss~~~~~~~--------------------------------------------------------~~~~~Y~asKa 153 (236)
T PRK06483 130 IIHITDYVVEKGS--------------------------------------------------------DKHIAYAASKA 153 (236)
T ss_pred EEEEcchhhccCC--------------------------------------------------------CCCccHHHHHH
Confidence 8998875322110 11357999999
Q ss_pred HHHHHHHHh----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHH
Q 008324 237 MGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (570)
Q Consensus 237 ~aE~lv~~~----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ai 312 (570)
..|.+++.+ .+++.+..++|+.+.....+ + ............ + .-....+|+++++
T Consensus 154 al~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~------~-----~~~~~~~~~~~~--~-------~~~~~~~~va~~~ 213 (236)
T PRK06483 154 ALDNMTLSFAAKLAPEVKVNSIAPALILFNEGD------D-----AAYRQKALAKSL--L-------KIEPGEEEIIDLV 213 (236)
T ss_pred HHHHHHHHHHHHHCCCcEEEEEccCceecCCCC------C-----HHHHHHHhccCc--c-------ccCCCHHHHHHHH
Confidence 999998765 34689999999988432110 0 011111111110 0 0123468999999
Q ss_pred HHHHHHhhCCCCCCceEEecCC
Q 008324 313 IVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 313 i~a~~~~~~~~~~~~iyni~s~ 334 (570)
..++. ...-.++++.+.++
T Consensus 214 ~~l~~---~~~~~G~~i~vdgg 232 (236)
T PRK06483 214 DYLLT---SCYVTGRSLPVDGG 232 (236)
T ss_pred HHHhc---CCCcCCcEEEeCcc
Confidence 88874 12223667777655
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.5e-11 Score=127.21 Aligned_cols=182 Identities=15% Similarity=0.139 Sum_probs=120.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||||+||++++++|++.| .+|++..|+.... +... +.+.+..+ ..++.+
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La~~G---~~Vil~~R~~~~~---~~~~---------~~l~~~~~-------~~~v~~ 69 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLAAAG---AEVILPVRNRAKG---EAAV---------AAIRTAVP-------DAKLSL 69 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHH---------HHHHHhCC-------CCceEE
Confidence 579999999999999999999999998 6788888875321 1111 11222211 146889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc------cccHHHHHHHhHHHHHHHHHHHHH-c-cCc
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF------DERYDVAFGINTLGVIHLVNFAKK-C-VKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f------~~~~~~~~~~Nv~gt~~ll~la~~-~-~~l 154 (570)
+.+|++++ +..+.+. ..+|++||+||.... .+.++..+.+|+.|...+.+.+.. + .+-
T Consensus 70 ~~~Dl~d~-------~sv~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~ 142 (313)
T PRK05854 70 RALDLSSL-------ASVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGR 142 (313)
T ss_pred EEecCCCH-------HHHHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCC
Confidence 99999953 3233332 358999999997532 145677899999998888777653 1 133
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|.+||....... ++-..+.+..+ ......|+.|
T Consensus 143 ~riv~vsS~~~~~~~---~~~~~~~~~~~-----------------------------------------~~~~~~Y~~S 178 (313)
T PRK05854 143 ARVTSQSSIAARRGA---INWDDLNWERS-----------------------------------------YAGMRAYSQS 178 (313)
T ss_pred CCeEEEechhhcCCC---cCccccccccc-----------------------------------------CcchhhhHHH
Confidence 589999987543211 11000000000 0223579999
Q ss_pred HHHHHHHHHHh-------ccCCcEEEEecCceecCCC
Q 008324 235 KTMGEMLMQQS-------KENLSLVIIRPTVVSGTYK 264 (570)
Q Consensus 235 K~~aE~lv~~~-------~~~lp~~IvRPsiV~g~~~ 264 (570)
|+..+.+..++ ..++.+..+.||.|-....
T Consensus 179 K~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~ 215 (313)
T PRK05854 179 KIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLL 215 (313)
T ss_pred HHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCcc
Confidence 99999988765 1368999999999976543
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.3e-11 Score=122.10 Aligned_cols=223 Identities=17% Similarity=0.156 Sum_probs=137.7
Q ss_pred cCCCEEEEECCc--chhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 10 LENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaT--GFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||+++||||+ +-||++++++|++.| .+|++..|+.......+.+. + +.+. ..++
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G---~~v~~~~~~~~~~~~~~~~~-~---------~~~~---------~~~~ 61 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAG---AELGITYLPDEKGRFEKKVR-E---------LTEP---------LNPS 61 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCC---CEEEEEecCcccchHHHHHH-H---------HHhc---------cCcc
Confidence 478999999986 789999999999998 56677666543211122221 1 1111 1245
Q ss_pred EEEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCC-------c----cccHHHHHHHhHHHHHHHHHHHH
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK-------F----DERYDVAFGINTLGVIHLVNFAK 149 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~-------f----~~~~~~~~~~Nv~gt~~ll~la~ 149 (570)
.++.+|+++++ ..+.++ ..+|++||+||... + .+.++..+++|+.|+..+.+.+.
T Consensus 62 ~~~~~Dl~d~~-------~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~ 134 (258)
T PRK07370 62 LFLPCDVQDDA-------QIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAK 134 (258)
T ss_pred eEeecCcCCHH-------HHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHH
Confidence 67899999543 222222 36899999999642 2 13456778999999999988766
Q ss_pred H-ccCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 008324 150 K-CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (570)
Q Consensus 150 ~-~~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
. +..-.++|++||...... + +..
T Consensus 135 ~~m~~~g~Iv~isS~~~~~~---------~-----------------------------------------------~~~ 158 (258)
T PRK07370 135 PLMSEGGSIVTLTYLGGVRA---------I-----------------------------------------------PNY 158 (258)
T ss_pred HHHhhCCeEEEEeccccccC---------C-----------------------------------------------ccc
Confidence 4 322257999998642211 0 112
Q ss_pred chHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeee
Q 008324 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.. ..++.+..+.||.|-.+......+. .......... . ....+.
T Consensus 159 ~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~-------~~~~~~~~~~----~-----p~~r~~ 222 (258)
T PRK07370 159 NVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGI-------LDMIHHVEEK----A-----PLRRTV 222 (258)
T ss_pred chhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccc-------hhhhhhhhhc----C-----CcCcCC
Confidence 46999999999988765 3579999999999977533211110 0111111110 0 112345
Q ss_pred ehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
..+|+++++..++.+.... -.++++.+.++
T Consensus 223 ~~~dva~~~~fl~s~~~~~-~tG~~i~vdgg 252 (258)
T PRK07370 223 TQTEVGNTAAFLLSDLASG-ITGQTIYVDAG 252 (258)
T ss_pred CHHHHHHHHHHHhChhhcc-ccCcEEEECCc
Confidence 6699999999887533221 12566666544
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.4e-11 Score=120.80 Aligned_cols=162 Identities=17% Similarity=0.161 Sum_probs=111.4
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+||||||++|++++++|++.| .+|+++.|+...... +.+ ..++.++.+
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G---~~V~~~~r~~~~~~~---~~~-----------------------~~~~~~~~~ 52 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERG---WQVTATVRGPQQDTA---LQA-----------------------LPGVHIEKL 52 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCC---CEEEEEeCCCcchHH---HHh-----------------------ccccceEEc
Confidence 689999999999999999999998 678999997654311 110 135667889
Q ss_pred cCCCCCCCCCchhhHHHHhC-----CccEEEEcCccCCc---------cccHHHHHHHhHHHHHHHHHHHHHc-c-CceE
Q 008324 93 DISSEDLGLKDSNLKEELWN-----ELDIMVNSAAITKF---------DERYDVAFGINTLGVIHLVNFAKKC-V-KLKV 156 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~-----~vdiViH~AA~v~f---------~~~~~~~~~~Nv~gt~~ll~la~~~-~-~l~~ 156 (570)
|++++ +..+.+.+ ++|+|||+||.... .+.+...+++|+.++.++++.+... . +-..
T Consensus 53 D~~d~-------~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 125 (225)
T PRK08177 53 DMNDP-------ASLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGV 125 (225)
T ss_pred CCCCH-------HHHHHHHHHhhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCE
Confidence 99853 22223332 58999999987521 1335566789999999999887653 1 2246
Q ss_pred EEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHH
Q 008324 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (570)
Q Consensus 157 ~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
++.+||.+..... .+. .....|+.+|+
T Consensus 126 iv~~ss~~g~~~~------~~~-----------------------------------------------~~~~~Y~~sK~ 152 (225)
T PRK08177 126 LAFMSSQLGSVEL------PDG-----------------------------------------------GEMPLYKASKA 152 (225)
T ss_pred EEEEccCcccccc------CCC-----------------------------------------------CCccchHHHHH
Confidence 7777765321100 000 11236999999
Q ss_pred HHHHHHHHh-----ccCCcEEEEecCceecCC
Q 008324 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (570)
Q Consensus 237 ~aE~lv~~~-----~~~lp~~IvRPsiV~g~~ 263 (570)
..|.+++.+ ..++.+..++||.|-.+.
T Consensus 153 a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~ 184 (225)
T PRK08177 153 ALNSMTRSFVAELGEPTLTVLSMHPGWVKTDM 184 (225)
T ss_pred HHHHHHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence 999999865 346889999999987653
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.6e-11 Score=124.42 Aligned_cols=223 Identities=12% Similarity=0.127 Sum_probs=139.4
Q ss_pred HhhcCCCEEEEECCc--chhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccC
Q 008324 7 VEFLENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 7 ~~~~~~k~VlITGaT--GFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
...++||+++||||+ +-||.++++.|++.| .+|++..|+.. ..++++ + +.++.
T Consensus 5 ~~~~~~k~~lItGas~~~GIG~aia~~la~~G---~~V~l~~r~~~---~~~~~~-~---------l~~~~--------- 59 (272)
T PRK08159 5 SGLMAGKRGLILGVANNRSIAWGIAKACRAAG---AELAFTYQGDA---LKKRVE-P---------LAAEL--------- 59 (272)
T ss_pred cccccCCEEEEECCCCCCcHHHHHHHHHHHCC---CEEEEEcCchH---HHHHHH-H---------HHHhc---------
Confidence 356789999999997 789999999999999 56777666422 122222 1 11111
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-----------cccHHHHHHHhHHHHHHHHH
Q 008324 85 EKITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVN 146 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-----------~~~~~~~~~~Nv~gt~~ll~ 146 (570)
.....+.+|++++ +..+.++ ..+|++||+||.... .+.++..+++|+.|+..+++
T Consensus 60 ~~~~~~~~Dl~~~-------~~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~ 132 (272)
T PRK08159 60 GAFVAGHCDVTDE-------ASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQ 132 (272)
T ss_pred CCceEEecCCCCH-------HHHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHH
Confidence 2345689999954 2222322 358999999997531 13467778999999999998
Q ss_pred HHHH-ccCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccC
Q 008324 147 FAKK-CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLH 225 (570)
Q Consensus 147 la~~-~~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 225 (570)
.+.. +.+-.++|.+||..... +.
T Consensus 133 ~~~~~~~~~g~Iv~iss~~~~~---------~~----------------------------------------------- 156 (272)
T PRK08159 133 RAEKLMTDGGSILTLTYYGAEK---------VM----------------------------------------------- 156 (272)
T ss_pred HHHHhcCCCceEEEEecccccc---------CC-----------------------------------------------
Confidence 8765 33335788888753211 00
Q ss_pred CCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeee
Q 008324 226 GWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIM 300 (570)
Q Consensus 226 ~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~ 300 (570)
+....|+.||+..+.+.+.. ..++.+..+.||.|..+.....+ ... . +....... .+ ..
T Consensus 157 p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~----~~~---~-~~~~~~~~---~p-----~~ 220 (272)
T PRK08159 157 PHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIG----DFR---Y-ILKWNEYN---AP-----LR 220 (272)
T ss_pred CcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCC----cch---H-HHHHHHhC---Cc-----cc
Confidence 11246999999988888754 35799999999988764321111 100 0 10110000 00 11
Q ss_pred eeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 301 d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.+...+++|++++.++.... ..-.+.++.+.++
T Consensus 221 r~~~peevA~~~~~L~s~~~-~~itG~~i~vdgG 253 (272)
T PRK08159 221 RTVTIEEVGDSALYLLSDLS-RGVTGEVHHVDSG 253 (272)
T ss_pred ccCCHHHHHHHHHHHhCccc-cCccceEEEECCC
Confidence 24667999999998875322 2223667777766
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.36 E-value=6.5e-11 Score=117.25 Aligned_cols=204 Identities=17% Similarity=0.201 Sum_probs=136.1
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
..++++++||||||-||..++++|.++| +.|.++.|+++.. +++. +.++..+ .-++.
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g---~~liLvaR~~~kL---~~la---------~~l~~~~--------~v~v~ 59 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRG---YNLILVARREDKL---EALA---------KELEDKT--------GVEVE 59 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCcHHHH---HHHH---------HHHHHhh--------CceEE
Confidence 4578999999999999999999999999 7889999986432 2222 2222222 24678
Q ss_pred EEeccCCCCCCCCCchhhHH-HHhC---CccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHHH-c--cCc
Q 008324 89 FVPGDISSEDLGLKDSNLKE-ELWN---ELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAKK-C--VKL 154 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~-~l~~---~vdiViH~AA~v~f~-------~~~~~~~~~Nv~gt~~ll~la~~-~--~~l 154 (570)
++..|+++++ +...+. ++.+ .+|++||+||...+. +..+..+++|+.+...+-.+... | .+-
T Consensus 60 vi~~DLs~~~----~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~ 135 (265)
T COG0300 60 VIPADLSDPE----ALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGA 135 (265)
T ss_pred EEECcCCChh----HHHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999753 222221 2222 599999999987542 33456789999998888766543 2 134
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|-++|...+-.. +....|+.|
T Consensus 136 G~IiNI~S~ag~~p~--------------------------------------------------------p~~avY~AT 159 (265)
T COG0300 136 GHIINIGSAAGLIPT--------------------------------------------------------PYMAVYSAT 159 (265)
T ss_pred ceEEEEechhhcCCC--------------------------------------------------------cchHHHHHH
Confidence 579999987644321 234689999
Q ss_pred HHHHHHHHH----Hh-ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHH
Q 008324 235 KTMGEMLMQ----QS-KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~lv~----~~-~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..-.+-+ +. ..++.+..+-||.|.....+. +. .+.-. .....-+...++||
T Consensus 160 Ka~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~-----~~------------~~~~~-----~~~~~~~~~~~~va 217 (265)
T COG0300 160 KAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDA-----KG------------SDVYL-----LSPGELVLSPEDVA 217 (265)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccc-----cc------------ccccc-----ccchhhccCHHHHH
Confidence 986655443 33 458999999999988754420 00 00000 00123357789999
Q ss_pred HHHHHHHH
Q 008324 310 NAMIVAMV 317 (570)
Q Consensus 310 ~aii~a~~ 317 (570)
++.+.++.
T Consensus 218 ~~~~~~l~ 225 (265)
T COG0300 218 EAALKALE 225 (265)
T ss_pred HHHHHHHh
Confidence 99998886
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.1e-11 Score=123.68 Aligned_cols=220 Identities=15% Similarity=0.129 Sum_probs=136.2
Q ss_pred cCCCEEEEECCc--chhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 10 LENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaT--GFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||+++||||+ +-||+++++.|++.| .+|++..|+.+. .++++ + +.++.+ .+
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~G---~~Vil~~r~~~~---~~~~~-~---------~~~~~~--------~~- 57 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQG---AELAFTYLNEAL---KKRVE-P---------IAQELG--------SD- 57 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHCC---CEEEEEecCHHH---HHHHH-H---------HHHhcC--------Cc-
Confidence 368999999997 789999999999998 577877776321 12222 1 111111 23
Q ss_pred EEEeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCC-------c----cccHHHHHHHhHHHHHHHHHHHH
Q 008324 88 TFVPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITK-------F----DERYDVAFGINTLGVIHLVNFAK 149 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~-------f----~~~~~~~~~~Nv~gt~~ll~la~ 149 (570)
.++.+|++++ +..+.+ ...+|++||+||... + .+.++..+++|+.|+..+.+.+.
T Consensus 58 ~~~~~Dv~d~-------~~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 130 (274)
T PRK08415 58 YVYELDVSKP-------EHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALL 130 (274)
T ss_pred eEEEecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHH
Confidence 5688999964 222222 245899999999642 1 13467789999999999988776
Q ss_pred H-ccCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 008324 150 K-CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (570)
Q Consensus 150 ~-~~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
. +..-.++|++||....... +..
T Consensus 131 p~m~~~g~Iv~isS~~~~~~~--------------------------------------------------------~~~ 154 (274)
T PRK08415 131 PLLNDGASVLTLSYLGGVKYV--------------------------------------------------------PHY 154 (274)
T ss_pred HHhccCCcEEEEecCCCccCC--------------------------------------------------------Ccc
Confidence 4 3333579999985422110 112
Q ss_pred chHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeee
Q 008324 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.. ..++.+..+.|+.|..+.....+ + . .. ........ .+ ..-+.
T Consensus 155 ~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~---~-~---~~-~~~~~~~~---~p-----l~r~~ 218 (274)
T PRK08415 155 NVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIG---D-F---RM-ILKWNEIN---AP-----LKKNV 218 (274)
T ss_pred hhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccc---h-h---hH-Hhhhhhhh---Cc-----hhccC
Confidence 46999999988887754 35799999999988764321110 0 0 00 00000000 00 11235
Q ss_pred ehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
..+|++++++.++...... -.++++.+.++
T Consensus 219 ~pedva~~v~fL~s~~~~~-itG~~i~vdGG 248 (274)
T PRK08415 219 SIEEVGNSGMYLLSDLSSG-VTGEIHYVDAG 248 (274)
T ss_pred CHHHHHHHHHHHhhhhhhc-ccccEEEEcCc
Confidence 6799999999887643221 22567766665
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.8e-11 Score=121.05 Aligned_cols=224 Identities=13% Similarity=0.117 Sum_probs=131.6
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++++||||+|+||++++++|++.| .+|+++.|..... .+.+. +.+.... ..++..+.+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G---~~V~~~~~~~~~~--~~~~~---------~~l~~~~--------~~~~~~~~~ 59 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEG---YRVVLHYHRSAAA--ASTLA---------AELNARR--------PNSAVTCQA 59 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCC---CeEEEEcCCcHHH--HHHHH---------HHHHhcc--------CCceEEEEc
Confidence 579999999999999999999998 5677776653211 11111 1111111 135667899
Q ss_pred cCCCCCCCCCc-hhhHHH---HhCCccEEEEcCccCCc------c--c----------cHHHHHHHhHHHHHHHHHHHHH
Q 008324 93 DISSEDLGLKD-SNLKEE---LWNELDIMVNSAAITKF------D--E----------RYDVAFGINTLGVIHLVNFAKK 150 (570)
Q Consensus 93 Dl~~~~lgls~-~~~~~~---l~~~vdiViH~AA~v~f------~--~----------~~~~~~~~Nv~gt~~ll~la~~ 150 (570)
|+++++..... .+..+. ....+|+|||+||.... + + .+...+++|+.|+..+.+.+..
T Consensus 60 Dv~d~~~~~~~~~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 139 (267)
T TIGR02685 60 DLSNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQ 139 (267)
T ss_pred cCCCchhhHHHHHHHHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 99965311000 111111 12469999999996421 1 1 2556789999999999887653
Q ss_pred -ccC--------ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccc
Q 008324 151 -CVK--------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTER 221 (570)
Q Consensus 151 -~~~--------l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 221 (570)
++. -..+|.+||..... +.
T Consensus 140 ~~~~~~~~~~~~~~~iv~~~s~~~~~---------~~------------------------------------------- 167 (267)
T TIGR02685 140 RQAGTRAEQRSTNLSIVNLCDAMTDQ---------PL------------------------------------------- 167 (267)
T ss_pred HhhhcccccCCCCeEEEEehhhhccC---------CC-------------------------------------------
Confidence 211 12455555442211 00
Q ss_pred cccCCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCC
Q 008324 222 AKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGET 296 (570)
Q Consensus 222 ~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~ 296 (570)
+..+.|+.||+..|.+++.. ..+++++.++|+.+..+...+ ......+... . +.
T Consensus 168 ----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~-----------~~~~~~~~~~-~---~~-- 226 (267)
T TIGR02685 168 ----LGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP-----------FEVQEDYRRK-V---PL-- 226 (267)
T ss_pred ----cccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc-----------hhHHHHHHHh-C---CC--
Confidence 22357999999999998865 347999999999886442110 0011111111 0 00
Q ss_pred CeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 297 KVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 297 ~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.......++++++++.++.... ..-.++++.+.++
T Consensus 227 --~~~~~~~~~va~~~~~l~~~~~-~~~~G~~~~v~gg 261 (267)
T TIGR02685 227 --GQREASAEQIADVVIFLVSPKA-KYITGTCIKVDGG 261 (267)
T ss_pred --CcCCCCHHHHHHHHHHHhCccc-CCcccceEEECCc
Confidence 0123577999999998875322 2223667777655
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.5e-11 Score=137.31 Aligned_cols=167 Identities=19% Similarity=0.165 Sum_probs=118.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++++||||||+||++++++|++.| .+|+++.|+.... +.+.++ ++.. ..++.+
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~G---~~v~~~~r~~~~~---~~~~~~---------~~~~---------~~~~~~ 368 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFAREG---AEVVASDIDEAAA---ERTAEL---------IRAA---------GAVAHA 368 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHH---------HHhc---------CCeEEE
Confidence 567899999999999999999999998 5688888865321 222111 1110 246788
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-cc--
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-CV-- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~~-- 152 (570)
+.+|++++ +..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++++++.. +.
T Consensus 369 ~~~Dv~~~-------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~ 441 (582)
T PRK05855 369 YRVDVSDA-------DAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVER 441 (582)
T ss_pred EEcCCCCH-------HHHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 99999954 3333333 248999999998642 234667788999999999887643 21
Q ss_pred C-ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 153 K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 153 ~-l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+ -.++|++||...+.... ....|
T Consensus 442 ~~~g~iv~~sS~~~~~~~~--------------------------------------------------------~~~~Y 465 (582)
T PRK05855 442 GTGGHIVNVASAAAYAPSR--------------------------------------------------------SLPAY 465 (582)
T ss_pred CCCcEEEEECChhhccCCC--------------------------------------------------------CCcHH
Confidence 2 24899999986654221 13579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCC
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~ 263 (570)
+.||+..+.+.+.. ..++++++++||.|-.+.
T Consensus 466 ~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 502 (582)
T PRK05855 466 ATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNI 502 (582)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccc
Confidence 99999888877644 458999999999987654
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.1e-11 Score=116.42 Aligned_cols=210 Identities=15% Similarity=0.117 Sum_probs=138.0
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
..++|.|+|||||+.||.+.++.|.+.| .+|.+..|.. +||++ |..+.+ ..++.
T Consensus 3 ~~~~kv~lITGASSGiG~A~A~~l~~~G---~~vvl~aRR~------drL~~----------la~~~~-------~~~~~ 56 (246)
T COG4221 3 TLKGKVALITGASSGIGEATARALAEAG---AKVVLAARRE------ERLEA----------LADEIG-------AGAAL 56 (246)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHHCC---CeEEEEeccH------HHHHH----------HHHhhc-------cCceE
Confidence 4567999999999999999999999999 7889999865 33331 112221 14688
Q ss_pred EEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--cCceEEE
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--VKLKVFV 158 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~l~~~V 158 (570)
++..|++++.---..-.....-+.++|++||.||.... .+.|+..+++|+.|..+..++... | .+-..+|
T Consensus 57 ~~~~DVtD~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~Ii 136 (246)
T COG4221 57 ALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHII 136 (246)
T ss_pred EEeeccCCHHHHHHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEE
Confidence 99999996421000001112233469999999998643 256888899999999999887753 2 2344788
Q ss_pred EEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHH
Q 008324 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (570)
Q Consensus 159 ~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~a 238 (570)
-+||..-. .+| +..+.|+.||+..
T Consensus 137 N~~SiAG~---------~~y-----------------------------------------------~~~~vY~ATK~aV 160 (246)
T COG4221 137 NLGSIAGR---------YPY-----------------------------------------------PGGAVYGATKAAV 160 (246)
T ss_pred Eecccccc---------ccC-----------------------------------------------CCCccchhhHHHH
Confidence 88886421 122 3357899999988
Q ss_pred HHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHH
Q 008324 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (570)
Q Consensus 239 E~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii 313 (570)
..+.... ..+++++.+-|+.|....-. -|.+. +-..-..... .....+..+|+|+++.
T Consensus 161 ~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s---~v~~~--g~~~~~~~~y------------~~~~~l~p~dIA~~V~ 223 (246)
T COG4221 161 RAFSLGLRQELAGTGIRVTVISPGLVETTEFS---TVRFE--GDDERADKVY------------KGGTALTPEDIAEAVL 223 (246)
T ss_pred HHHHHHHHHHhcCCCeeEEEecCceecceecc---cccCC--chhhhHHHHh------------ccCCCCCHHHHHHHHH
Confidence 8876543 46899999999999664321 11110 0000011111 1124578899999999
Q ss_pred HHHH
Q 008324 314 VAMV 317 (570)
Q Consensus 314 ~a~~ 317 (570)
.++.
T Consensus 224 ~~~~ 227 (246)
T COG4221 224 FAAT 227 (246)
T ss_pred HHHh
Confidence 9886
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.8e-11 Score=120.50 Aligned_cols=226 Identities=14% Similarity=0.131 Sum_probs=138.0
Q ss_pred cCCCEEEEECCc--chhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 10 LENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaT--GFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||+++||||+ +-||++++++|++.| .+|++..|..+.....+.+.+ +.. ..++
T Consensus 5 ~~~k~~lItGa~~s~GIG~aia~~la~~G---~~v~~~~r~~~~~~~~~~~~~-------------~~~-------~~~~ 61 (257)
T PRK08594 5 LEGKTYVVMGVANKRSIAWGIARSLHNAG---AKLVFTYAGERLEKEVRELAD-------------TLE-------GQES 61 (257)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCC---CEEEEecCcccchHHHHHHHH-------------HcC-------CCce
Confidence 579999999997 899999999999998 577877775433322222221 110 1467
Q ss_pred EEEeccCCCCCCCCCchhhHHHH---hCCccEEEEcCccCC-------cc----ccHHHHHHHhHHHHHHHHHHHHH-cc
Q 008324 88 TFVPGDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITK-------FD----ERYDVAFGINTLGVIHLVNFAKK-CV 152 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l---~~~vdiViH~AA~v~-------f~----~~~~~~~~~Nv~gt~~ll~la~~-~~ 152 (570)
..+.+|+++++-- ....+.+ +..+|++||+||... +. +.+...+++|+.++..+.+.+.. +.
T Consensus 62 ~~~~~Dv~d~~~v---~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 138 (257)
T PRK08594 62 LLLPCDVTSDEEI---TACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMT 138 (257)
T ss_pred EEEecCCCCHHHH---HHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcc
Confidence 7899999964210 1111122 245899999998642 11 23456688999999988877664 32
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|++||...... . +....|+
T Consensus 139 ~~g~Iv~isS~~~~~~---------~-----------------------------------------------~~~~~Y~ 162 (257)
T PRK08594 139 EGGSIVTLTYLGGERV---------V-----------------------------------------------QNYNVMG 162 (257)
T ss_pred cCceEEEEcccCCccC---------C-----------------------------------------------CCCchhH
Confidence 2257999998643211 0 1124699
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.. ..++.+..+.|+.|-.+.....++ .. ........ . . + ...+...++
T Consensus 163 asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~----~~---~~~~~~~~-~---~---p--~~r~~~p~~ 226 (257)
T PRK08594 163 VAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGG----FN---SILKEIEE-R---A---P--LRRTTTQEE 226 (257)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhcc----cc---HHHHHHhh-c---C---C--ccccCCHHH
Confidence 9999999988754 347999999999987653211111 00 00111110 0 0 0 112456789
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++++.++..... .-.+++..+.++
T Consensus 227 va~~~~~l~s~~~~-~~tG~~~~~dgg 252 (257)
T PRK08594 227 VGDTAAFLFSDLSR-GVTGENIHVDSG 252 (257)
T ss_pred HHHHHHHHcCcccc-cccceEEEECCc
Confidence 99999887753222 112566666544
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.1e-11 Score=120.53 Aligned_cols=221 Identities=17% Similarity=0.179 Sum_probs=134.7
Q ss_pred hcCCCEEEEECC--cchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 9 FLENKTILVSGV--TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 9 ~~~~k~VlITGa--TGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
+++||+++|||| ++-||++++++|++.| .+|++..|..+.. +.++ ++ ..+. ..
T Consensus 3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G---~~v~~~~~~~~~~---~~~~-~~---------~~~~---------~~ 57 (261)
T PRK08690 3 FLQGKKILITGMISERSIAYGIAKACREQG---AELAFTYVVDKLE---ERVR-KM---------AAEL---------DS 57 (261)
T ss_pred ccCCcEEEEECCCCCCcHHHHHHHHHHHCC---CEEEEEcCcHHHH---HHHH-HH---------Hhcc---------CC
Confidence 478999999997 6799999999999998 5667666642211 2221 11 1111 23
Q ss_pred eEEEeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc--------c----ccHHHHHHHhHHHHHHHHHH
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF--------D----ERYDVAFGINTLGVIHLVNF 147 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f--------~----~~~~~~~~~Nv~gt~~ll~l 147 (570)
...+.+|+++++ ..+.+ ...+|++||+||.... + +.++..+++|+.|+..+.+.
T Consensus 58 ~~~~~~Dv~~~~-------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~ 130 (261)
T PRK08690 58 ELVFRCDVASDD-------EINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKA 130 (261)
T ss_pred ceEEECCCCCHH-------HHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHH
Confidence 457899999543 23332 2469999999997531 1 23455678999999888876
Q ss_pred HHHc-c-CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccC
Q 008324 148 AKKC-V-KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLH 225 (570)
Q Consensus 148 a~~~-~-~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 225 (570)
+..+ . +-.++|++||.......
T Consensus 131 ~~p~m~~~~g~Iv~iss~~~~~~~-------------------------------------------------------- 154 (261)
T PRK08690 131 ARPMMRGRNSAIVALSYLGAVRAI-------------------------------------------------------- 154 (261)
T ss_pred HHHHhhhcCcEEEEEcccccccCC--------------------------------------------------------
Confidence 6542 1 22478888876432110
Q ss_pred CCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeee
Q 008324 226 GWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIM 300 (570)
Q Consensus 226 ~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~ 300 (570)
+....|+.||+..+.+.+.. ..++.+..+.|+.|-.+... ++.+ .......... .. + ..
T Consensus 155 ~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~---~~~~----~~~~~~~~~~-~~---p-----~~ 218 (261)
T PRK08690 155 PNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAAS---GIAD----FGKLLGHVAA-HN---P-----LR 218 (261)
T ss_pred CCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhh---cCCc----hHHHHHHHhh-cC---C-----CC
Confidence 11246999999998887654 45799999999998765321 1111 0111111111 10 1 12
Q ss_pred eeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 301 d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.+...+|||+++..++.+... .-.+.++-+.++
T Consensus 219 r~~~peevA~~v~~l~s~~~~-~~tG~~i~vdgG 251 (261)
T PRK08690 219 RNVTIEEVGNTAAFLLSDLSS-GITGEITYVDGG 251 (261)
T ss_pred CCCCHHHHHHHHHHHhCcccC-CcceeEEEEcCC
Confidence 245679999999988753222 122566666554
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.4e-11 Score=116.49 Aligned_cols=253 Identities=17% Similarity=0.170 Sum_probs=166.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
-+..+||||||-|-+|..++.-|.... .-..|++-.--|.... ..+.=-+
T Consensus 42 ~~~PrvLITG~LGQLG~~~A~LLR~~y-Gs~~VILSDI~KPp~~-----------------------------V~~~GPy 91 (366)
T KOG2774|consen 42 QKAPRVLITGSLGQLGRGLASLLRYMY-GSECVILSDIVKPPAN-----------------------------VTDVGPY 91 (366)
T ss_pred CCCCeEEEecchHHHhHHHHHHHHHHh-CCccEehhhccCCchh-----------------------------hcccCCc
Confidence 345689999999999999887665433 2122332111111110 0122235
Q ss_pred EeccCCCCCCCCCchhhHHHHh--CCccEEEEcCccCC-c-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEeccee
Q 008324 90 VPGDISSEDLGLKDSNLKEELW--NELDIMVNSAAITK-F-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~--~~vdiViH~AA~v~-f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v 165 (570)
+..|+.+ ...++++. ..+|-.||..|..+ + +.+-..+.++|+.|..|+++.|++. +++-| .-||..+
T Consensus 92 Iy~DILD-------~K~L~eIVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~-kL~iF-VPSTIGA 162 (366)
T KOG2774|consen 92 IYLDILD-------QKSLEEIVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKH-KLKVF-VPSTIGA 162 (366)
T ss_pred hhhhhhc-------cccHHHhhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHc-CeeEe-ecccccc
Confidence 6778773 33233433 35999999988653 2 3445567899999999999999997 77644 4688888
Q ss_pred ecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008324 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (570)
Q Consensus 166 ~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (570)
+|..+. -.+++.+- + ..+..-|+.||..||.+-+.+
T Consensus 163 FGPtSP------RNPTPdlt---------------------------------I-----QRPRTIYGVSKVHAEL~GEy~ 198 (366)
T KOG2774|consen 163 FGPTSP------RNPTPDLT---------------------------------I-----QRPRTIYGVSKVHAELLGEYF 198 (366)
T ss_pred cCCCCC------CCCCCCee---------------------------------e-----ecCceeechhHHHHHHHHHHH
Confidence 887431 11111110 1 124467999999999887765
Q ss_pred --ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCC
Q 008324 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQP 323 (570)
Q Consensus 246 --~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~ 323 (570)
+.++..-.+|.+.+.+... |-.|-.| +...-+--+..+|+ .+.+..++....+.+..||..+++..+....+.-
T Consensus 199 ~hrFg~dfr~~rfPg~is~~~-pgggttd--ya~A~f~~Al~~gk-~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~l 274 (366)
T KOG2774|consen 199 NHRFGVDFRSMRFPGIISATK-PGGGTTD--YAIAIFYDALQKGK-HTCYLRPDTRLPMMYDTDCMASVIQLLAADSQSL 274 (366)
T ss_pred HhhcCccceecccCcccccCC-CCCCcch--hHHHHHHHHHHcCC-cccccCCCccCceeehHHHHHHHHHHHhCCHHHh
Confidence 5588999999888877643 4444444 33323333445555 4677889999999999999999998776433322
Q ss_pred CCCceEEecCCCCCcccHHHHHHHHhhhcc
Q 008324 324 SDANIYHVGSSLRNPVTLVSILDYGFVYFT 353 (570)
Q Consensus 324 ~~~~iyni~s~~~~pit~~~l~~~i~~~~~ 353 (570)
..++||+++ -.+|-+|+++.+.+.+.
T Consensus 275 -krr~ynvt~---~sftpee~~~~~~~~~p 300 (366)
T KOG2774|consen 275 -KRRTYNVTG---FSFTPEEIADAIRRVMP 300 (366)
T ss_pred -hhheeeece---eccCHHHHHHHHHhhCC
Confidence 257999987 57899999999988754
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.9e-10 Score=113.29 Aligned_cols=108 Identities=14% Similarity=0.156 Sum_probs=79.9
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
++-++||+++||||+|+||++++++|++.| .+|+++.|++... .. .. . ...
T Consensus 9 ~~~l~~k~~lITGas~gIG~ala~~l~~~G---~~Vi~~~r~~~~~-----~~-~~------------~--------~~~ 59 (245)
T PRK12367 9 QSTWQGKRIGITGASGALGKALTKAFRAKG---AKVIGLTHSKINN-----SE-SN------------D--------ESP 59 (245)
T ss_pred HHhhCCCEEEEEcCCcHHHHHHHHHHHHCC---CEEEEEECCchhh-----hh-hh------------c--------cCC
Confidence 455789999999999999999999999998 6778888865211 11 00 0 011
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc----cccHHHHHHHhHHHHHHHHHHHHH
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF----DERYDVAFGINTLGVIHLVNFAKK 150 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f----~~~~~~~~~~Nv~gt~~ll~la~~ 150 (570)
...+.+|+++ .+..+..+.++|++||+||.... .+.++..+++|+.|+.++++.+..
T Consensus 60 ~~~~~~D~~~-------~~~~~~~~~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 120 (245)
T PRK12367 60 NEWIKWECGK-------EESLDKQLASLDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFED 120 (245)
T ss_pred CeEEEeeCCC-------HHHHHHhcCCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 2467899984 44445667789999999997432 245677799999999999998765
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.1e-11 Score=121.60 Aligned_cols=136 Identities=23% Similarity=0.248 Sum_probs=94.7
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
.+...||+|+|||||..||.+++..|.+.| .++++++|..+..+ ++.++ +++..+ .++
T Consensus 7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G---~~l~lvar~~rrl~---~v~~~---------l~~~~~-------~~~ 64 (282)
T KOG1205|consen 7 MERLAGKVVLITGASSGIGEALAYELAKRG---AKLVLVARRARRLE---RVAEE---------LRKLGS-------LEK 64 (282)
T ss_pred HHHhCCCEEEEeCCCcHHHHHHHHHHHhCC---CceEEeehhhhhHH---HHHHH---------HHHhCC-------cCc
Confidence 356789999999999999999999999999 67788888765432 22111 122211 126
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc-c--CceE
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-V--KLKV 156 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~-~--~l~~ 156 (570)
+.++.+|+++.+.-....+.....+.++|++||.||.... .+..+..+++|+.|+-.+.+++... + +-.+
T Consensus 65 v~~~~~Dvs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~Gh 144 (282)
T KOG1205|consen 65 VLVLQLDVSDEESVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGH 144 (282)
T ss_pred cEEEeCccCCHHHHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCe
Confidence 9999999996432211111111345679999999998642 1335567899999999998887652 2 3358
Q ss_pred EEEEecce
Q 008324 157 FVHVSTAY 164 (570)
Q Consensus 157 ~V~vSTa~ 164 (570)
+|.+||..
T Consensus 145 IVvisSia 152 (282)
T KOG1205|consen 145 IVVISSIA 152 (282)
T ss_pred EEEEeccc
Confidence 99999874
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.6e-10 Score=115.84 Aligned_cols=167 Identities=20% Similarity=0.193 Sum_probs=114.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|.||+.+++.|++.| .+|+++.|+.... +++.++ ++... ..++..
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~---------l~~~~--------~~~~~~ 61 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAEG---CHLHLVARDADAL---EALAAD---------LRAAH--------GVDVAV 61 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcC---CEEEEEeCCHHHH---HHHHHH---------HHhhc--------CCceEE
Confidence 568999999999999999999999988 5788888864321 111111 11111 246788
Q ss_pred EeccCCCCCCCCCchhhHHHHh---CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-cc--CceE
Q 008324 90 VPGDISSEDLGLKDSNLKEELW---NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-CV--KLKV 156 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~---~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~~--~l~~ 156 (570)
+.+|++++ +..+.++ ..+|++||+||.... .+.++..+++|+.|...+.+.+.. +. +-.+
T Consensus 62 ~~~D~~~~-------~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ 134 (259)
T PRK06125 62 HALDLSSP-------EAREQLAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGV 134 (259)
T ss_pred EEecCCCH-------HHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcE
Confidence 99999953 3233333 469999999997532 134677789999999999887642 21 2347
Q ss_pred EEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHH
Q 008324 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (570)
Q Consensus 157 ~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+|++||.... .. . .....|..+|+
T Consensus 135 iv~iss~~~~--~~-------~-----------------------------------------------~~~~~y~ask~ 158 (259)
T PRK06125 135 IVNVIGAAGE--NP-------D-----------------------------------------------ADYICGSAGNA 158 (259)
T ss_pred EEEecCcccc--CC-------C-----------------------------------------------CCchHhHHHHH
Confidence 8888875321 10 0 11245889999
Q ss_pred HHHHHHHHh-----ccCCcEEEEecCceecC
Q 008324 237 MGEMLMQQS-----KENLSLVIIRPTVVSGT 262 (570)
Q Consensus 237 ~aE~lv~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
..+.+++.. ..+++++.+.||.|-++
T Consensus 159 al~~~~~~la~e~~~~gi~v~~i~PG~v~t~ 189 (259)
T PRK06125 159 ALMAFTRALGGKSLDDGVRVVGVNPGPVATD 189 (259)
T ss_pred HHHHHHHHHHHHhCccCeEEEEEecCccccH
Confidence 988887754 35799999999988765
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.32 E-value=4.2e-11 Score=124.10 Aligned_cols=174 Identities=17% Similarity=0.187 Sum_probs=116.0
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.|++++||||||.||++++++|++.| .+|+++.|++.. .+.+.+ .+++..+ ..++..+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G---~~Vil~~R~~~~---l~~~~~---------~l~~~~~-------~~~~~~~ 109 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKG---LNLVLVARNPDK---LKDVSD---------SIQSKYS-------KTQIKTV 109 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCC---CCEEEEECCHHH---HHHHHH---------HHHHHCC-------CcEEEEE
Confidence 48999999999999999999999998 567888886532 122221 1222211 1356778
Q ss_pred eccCCCCCCCCCchhhHHHHhC--CccEEEEcCccCC-----cc----ccHHHHHHHhHHHHHHHHHHHHH-c--cCceE
Q 008324 91 PGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITK-----FD----ERYDVAFGINTLGVIHLVNFAKK-C--VKLKV 156 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~-----f~----~~~~~~~~~Nv~gt~~ll~la~~-~--~~l~~ 156 (570)
.+|+++. .. +..+...+.++ ++|++||+||... +. +.++..+++|+.|+..+.+.+.. + .+..+
T Consensus 110 ~~Dl~~~-~~-~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~ 187 (320)
T PLN02780 110 VVDFSGD-ID-EGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGA 187 (320)
T ss_pred EEECCCC-cH-HHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcE
Confidence 8999841 00 01111122333 3669999999742 21 23556789999999999988754 2 24568
Q ss_pred EEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHH
Q 008324 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (570)
Q Consensus 157 ~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+|.+||........ . +....|+.||+
T Consensus 188 IV~iSS~a~~~~~~-------~-----------------------------------------------p~~~~Y~aSKa 213 (320)
T PLN02780 188 IINIGSGAAIVIPS-------D-----------------------------------------------PLYAVYAATKA 213 (320)
T ss_pred EEEEechhhccCCC-------C-----------------------------------------------ccchHHHHHHH
Confidence 99999975432100 0 11357999999
Q ss_pred HHHHHHHHh-----ccCCcEEEEecCceecC
Q 008324 237 MGEMLMQQS-----KENLSLVIIRPTVVSGT 262 (570)
Q Consensus 237 ~aE~lv~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
..+.+.+.. ..++.+..+.||.|-++
T Consensus 214 al~~~~~~L~~El~~~gI~V~~v~PG~v~T~ 244 (320)
T PLN02780 214 YIDQFSRCLYVEYKKSGIDVQCQVPLYVATK 244 (320)
T ss_pred HHHHHHHHHHHHHhccCeEEEEEeeCceecC
Confidence 999887754 35899999999998765
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=7.3e-11 Score=118.34 Aligned_cols=220 Identities=16% Similarity=0.113 Sum_probs=135.7
Q ss_pred cCCCEEEEECC--cchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 10 LENKTILVSGV--TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGa--TGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||+++|||| ++-||.++++.|++.| .+|++..|++... ..+.+. ++. ..++
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G---~~v~l~~r~~~~~-~~~~~~-------------~~~--------~~~~ 59 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQG---AEVVLTGFGRALR-LTERIA-------------KRL--------PEPA 59 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCC---CEEEEecCccchh-HHHHHH-------------Hhc--------CCCC
Confidence 67899999999 8999999999999998 6788887764211 111111 111 1356
Q ss_pred EEEeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCC-------cc----ccHHHHHHHhHHHHHHHHHHHH
Q 008324 88 TFVPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITK-------FD----ERYDVAFGINTLGVIHLVNFAK 149 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~-------f~----~~~~~~~~~Nv~gt~~ll~la~ 149 (570)
.++.+|++++ +..+.+ ...+|++||+||... +. +.++..+++|+.|+..+.+.+.
T Consensus 60 ~~~~~Dv~~~-------~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~ 132 (256)
T PRK07889 60 PVLELDVTNE-------EHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALL 132 (256)
T ss_pred cEEeCCCCCH-------HHHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 6889999964 222222 246999999999752 21 2345568999999999888775
Q ss_pred H-ccCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 008324 150 K-CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (570)
Q Consensus 150 ~-~~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
. +.+-.++|.+|+....+ . +..
T Consensus 133 ~~m~~~g~Iv~is~~~~~~----------~-----------------------------------------------~~~ 155 (256)
T PRK07889 133 PLMNEGGSIVGLDFDATVA----------W-----------------------------------------------PAY 155 (256)
T ss_pred HhcccCceEEEEeeccccc----------C-----------------------------------------------Ccc
Confidence 4 32224677776431100 0 112
Q ss_pred chHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeee
Q 008324 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.. ..++.+..+.|+.|-.+..+..++. .......... .+. ...+.
T Consensus 156 ~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~-------~~~~~~~~~~----~p~----~~~~~ 220 (256)
T PRK07889 156 DWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGF-------ELLEEGWDER----APL----GWDVK 220 (256)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCc-------HHHHHHHHhc----Ccc----ccccC
Confidence 45899999988887654 4579999999999977643322211 0000011110 000 01245
Q ss_pred ehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
..+++|++++.++.+... .-.++++.+.++
T Consensus 221 ~p~evA~~v~~l~s~~~~-~~tG~~i~vdgg 250 (256)
T PRK07889 221 DPTPVARAVVALLSDWFP-ATTGEIVHVDGG 250 (256)
T ss_pred CHHHHHHHHHHHhCcccc-cccceEEEEcCc
Confidence 679999999988753222 123566666554
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=4.3e-11 Score=121.14 Aligned_cols=220 Identities=14% Similarity=0.166 Sum_probs=135.4
Q ss_pred cCCCEEEEECCcc--hhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 10 LENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaTG--FlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||+++||||++ -||++++++|++.| .+|++..|+... .++++ ++ .++. ...
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~G---a~V~~~~r~~~~---~~~~~-~~---------~~~~---------g~~ 59 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQG---AELAFTYQGEAL---GKRVK-PL---------AESL---------GSD 59 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCC---CEEEEecCchHH---HHHHH-HH---------HHhc---------CCc
Confidence 5799999999996 89999999999999 567777775321 12222 11 1111 122
Q ss_pred EEEeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCC-------c----cccHHHHHHHhHHHHHHHHHHHH
Q 008324 88 TFVPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITK-------F----DERYDVAFGINTLGVIHLVNFAK 149 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~-------f----~~~~~~~~~~Nv~gt~~ll~la~ 149 (570)
..+.+|++++ +..+.+ +..+|++||+||... + .+.++..+++|+.|+.++++.+.
T Consensus 60 ~~~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~ 132 (271)
T PRK06505 60 FVLPCDVEDI-------ASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAA 132 (271)
T ss_pred eEEeCCCCCH-------HHHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHH
Confidence 4688999954 222222 246899999999652 1 24466778999999999988765
Q ss_pred H-ccCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 008324 150 K-CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (570)
Q Consensus 150 ~-~~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
. +.+-.++|++||....... +..
T Consensus 133 ~~m~~~G~Iv~isS~~~~~~~--------------------------------------------------------~~~ 156 (271)
T PRK06505 133 KLMPDGGSMLTLTYGGSTRVM--------------------------------------------------------PNY 156 (271)
T ss_pred HhhccCceEEEEcCCCccccC--------------------------------------------------------Ccc
Confidence 3 3322578999886432110 112
Q ss_pred chHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeee
Q 008324 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.. ..++.+..+.|+.|-.+..+..+ + ..... ....... + ..-+.
T Consensus 157 ~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~---~----~~~~~-~~~~~~~---p-----~~r~~ 220 (271)
T PRK06505 157 NVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIG---D----ARAIF-SYQQRNS---P-----LRRTV 220 (271)
T ss_pred chhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCc---c----hHHHH-HHHhhcC---C-----ccccC
Confidence 46999999988887754 35799999999998765322110 1 00011 1111110 1 01134
Q ss_pred ehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
..+|+|++++.++..... .-.+++..+.++
T Consensus 221 ~peeva~~~~fL~s~~~~-~itG~~i~vdgG 250 (271)
T PRK06505 221 TIDEVGGSALYLLSDLSS-GVTGEIHFVDSG 250 (271)
T ss_pred CHHHHHHHHHHHhCcccc-ccCceEEeecCC
Confidence 568999999887753221 112566666555
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.4e-10 Score=116.66 Aligned_cols=221 Identities=14% Similarity=0.129 Sum_probs=134.9
Q ss_pred hcCCCEEEEECCcc--hhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 9 FLENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 9 ~~~~k~VlITGaTG--FlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
.++||+++||||++ -||+++++.|++.| .+|++..|+.+ ..+.++ + +.++. ..
T Consensus 5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G---~~v~~~~r~~~---~~~~~~-~---------l~~~~---------g~ 59 (260)
T PRK06603 5 LLQGKKGLITGIANNMSISWAIAQLAKKHG---AELWFTYQSEV---LEKRVK-P---------LAEEI---------GC 59 (260)
T ss_pred ccCCcEEEEECCCCCcchHHHHHHHHHHcC---CEEEEEeCchH---HHHHHH-H---------HHHhc---------CC
Confidence 45789999999997 79999999999988 56777666522 112221 1 11111 12
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCC-------c----cccHHHHHHHhHHHHHHHHHHH
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK-------F----DERYDVAFGINTLGVIHLVNFA 148 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~-------f----~~~~~~~~~~Nv~gt~~ll~la 148 (570)
...+.+|+++++ ..+.++ ..+|++||+|+... + .+.++..+++|+.|+..+++.+
T Consensus 60 ~~~~~~Dv~~~~-------~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~ 132 (260)
T PRK06603 60 NFVSELDVTNPK-------SISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSA 132 (260)
T ss_pred ceEEEccCCCHH-------HHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 235789999642 222222 45899999998642 1 1346777999999999998876
Q ss_pred HH-ccCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCC
Q 008324 149 KK-CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (570)
Q Consensus 149 ~~-~~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 227 (570)
.. +..-.++|++||...... . +.
T Consensus 133 ~~~m~~~G~Iv~isS~~~~~~---------~-----------------------------------------------~~ 156 (260)
T PRK06603 133 EALMHDGGSIVTLTYYGAEKV---------I-----------------------------------------------PN 156 (260)
T ss_pred HhhhccCceEEEEecCccccC---------C-----------------------------------------------Cc
Confidence 53 322257999988532210 0 11
Q ss_pred CchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeee
Q 008324 228 PNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDV 302 (570)
Q Consensus 228 ~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
...|+.||+..+.+.+.. ..++.+..+.||.|-.+.....+ . ........... .+ ...+
T Consensus 157 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~----~---~~~~~~~~~~~----~p-----~~r~ 220 (260)
T PRK06603 157 YNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIG----D---FSTMLKSHAAT----AP-----LKRN 220 (260)
T ss_pred ccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCC----C---cHHHHHHHHhc----CC-----cCCC
Confidence 246999999998887754 45799999999998765322111 0 01111111111 01 1123
Q ss_pred eehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
...+|+|++++.++..... .-.++++.+.++
T Consensus 221 ~~pedva~~~~~L~s~~~~-~itG~~i~vdgG 251 (260)
T PRK06603 221 TTQEDVGGAAVYLFSELSK-GVTGEIHYVDCG 251 (260)
T ss_pred CCHHHHHHHHHHHhCcccc-cCcceEEEeCCc
Confidence 4569999999988753222 112556666544
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.1e-10 Score=123.85 Aligned_cols=107 Identities=17% Similarity=0.289 Sum_probs=78.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|++.. +...+ . .. ..++..
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G---~~Vi~l~r~~~~------l~~~~---------~-~~--------~~~v~~ 228 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQG---AKVVALTSNSDK------ITLEI---------N-GE--------DLPVKT 228 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH------HHHHH---------h-hc--------CCCeEE
Confidence 478999999999999999999999988 677888875421 11000 0 00 124667
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc----cccHHHHHHHhHHHHHHHHHHHHH
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF----DERYDVAFGINTLGVIHLVNFAKK 150 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f----~~~~~~~~~~Nv~gt~~ll~la~~ 150 (570)
+.+|+++ ++.....++++|++||+||.... .+.++..+++|+.|+.++++++..
T Consensus 229 v~~Dvsd-------~~~v~~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp 286 (406)
T PRK07424 229 LHWQVGQ-------EAALAELLEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFT 286 (406)
T ss_pred EEeeCCC-------HHHHHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899994 44455677899999999986432 234567799999999999998764
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=7.7e-11 Score=119.51 Aligned_cols=247 Identities=11% Similarity=0.059 Sum_probs=138.5
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+++|||| |+||+++++.|. .| .+|+++.|+.... +.+.++ ++.. ..++.++.
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G---~~Vv~~~r~~~~~---~~~~~~---------l~~~---------~~~~~~~~ 55 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AG---KKVLLADYNEENL---EAAAKT---------LREA---------GFDVSTQE 55 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CC---CEEEEEeCCHHHH---HHHHHH---------HHhc---------CCeEEEEE
Confidence 578999998 689999999996 67 6788888864321 111111 1110 24678899
Q ss_pred ccCCCCCCCCCchhhHHHHh------CCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHc-cCceEEEEEecce
Q 008324 92 GDISSEDLGLKDSNLKEELW------NELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVSTAY 164 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~------~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~-~~l~~~V~vSTa~ 164 (570)
+|++++ +..+.++ ..+|+|||+||.....+.++..+++|+.|+.++++.+... ..-.++|.+||..
T Consensus 56 ~Dv~d~-------~~i~~~~~~~~~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~ 128 (275)
T PRK06940 56 VDVSSR-------ESVKALAATAQTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQS 128 (275)
T ss_pred eecCCH-------HHHHHHHHHHHhcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecc
Confidence 999953 3233333 3589999999986555678888999999999999988653 2223456677654
Q ss_pred eecCCCccccc--ccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHH
Q 008324 165 VAGERTGLILE--NPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (570)
Q Consensus 165 v~~~~~g~i~E--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv 242 (570)
...... ...+ .... ..+..+. .. +.. ..+....+....|+.||+..+.+.
T Consensus 129 ~~~~~~-~~~~~~~~~~---~~~~~~~---------------------~~-~~~--~~~~~~~~~~~~Y~asKaa~~~~~ 180 (275)
T PRK06940 129 GHRLPA-LTAEQERALA---TTPTEEL---------------------LS-LPF--LQPDAIEDSLHAYQIAKRANALRV 180 (275)
T ss_pred cccCcc-cchhhhcccc---ccccccc---------------------cc-ccc--ccccccCCccchhHHHHHHHHHHH
Confidence 322110 0000 0000 0000000 00 000 000000012357999999988887
Q ss_pred HHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHH
Q 008324 243 QQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (570)
Q Consensus 243 ~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~ 317 (570)
+.. ..++.+..+.||.|.++.... .+.+. . ......... ..+ ..-+...+++|+++..++.
T Consensus 181 ~~la~e~~~~gIrvn~i~PG~v~T~~~~~--~~~~~-~--~~~~~~~~~----~~p-----~~r~~~peeia~~~~fL~s 246 (275)
T PRK06940 181 MAEAVKWGERGARINSISPGIISTPLAQD--ELNGP-R--GDGYRNMFA----KSP-----AGRPGTPDEIAALAEFLMG 246 (275)
T ss_pred HHHHHHHccCCeEEEEeccCcCcCccchh--hhcCC-c--hHHHHHHhh----hCC-----cccCCCHHHHHHHHHHHcC
Confidence 643 357999999999987764311 00000 0 000111110 001 1124677999999888774
Q ss_pred HhhCCCCCCceEEecCC
Q 008324 318 AHAKQPSDANIYHVGSS 334 (570)
Q Consensus 318 ~~~~~~~~~~iyni~s~ 334 (570)
.... --.++++.+.++
T Consensus 247 ~~~~-~itG~~i~vdgg 262 (275)
T PRK06940 247 PRGS-FITGSDFLVDGG 262 (275)
T ss_pred cccC-cccCceEEEcCC
Confidence 2222 112566766655
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=7.2e-11 Score=115.92 Aligned_cols=153 Identities=13% Similarity=0.039 Sum_probs=107.8
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++++||||+|.||+++++.|++.| .+|+++.|+.... +.+.+ + .++..+.+
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g---~~v~~~~r~~~~~---~~~~~-------------~----------~~~~~~~~ 51 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDG---HKVTLVGARRDDL---EVAAK-------------E----------LDVDAIVC 51 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHH-------------h----------ccCcEEec
Confidence 469999999999999999999988 6778888864211 11110 0 13457889
Q ss_pred cCCCCCCCCCchhhHHHHh----CCccEEEEcCccC---------Cc---cccHHHHHHHhHHHHHHHHHHHHH-ccCce
Q 008324 93 DISSEDLGLKDSNLKEELW----NELDIMVNSAAIT---------KF---DERYDVAFGINTLGVIHLVNFAKK-CVKLK 155 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~----~~vdiViH~AA~v---------~f---~~~~~~~~~~Nv~gt~~ll~la~~-~~~l~ 155 (570)
|+++ ++..+.++ +.+|++||+|+.. .+ .+.++..+++|+.|+.++++.+.. +..-.
T Consensus 52 D~~~-------~~~v~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g 124 (223)
T PRK05884 52 DNTD-------PASLEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGG 124 (223)
T ss_pred CCCC-------HHHHHHHHHHHhhcCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 9995 33333333 3589999999742 11 234677789999999999998865 32335
Q ss_pred EEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHH
Q 008324 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (570)
Q Consensus 156 ~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
++|.+||.. . .....|+.||
T Consensus 125 ~Iv~isS~~---~---------------------------------------------------------~~~~~Y~asK 144 (223)
T PRK05884 125 SIISVVPEN---P---------------------------------------------------------PAGSAEAAIK 144 (223)
T ss_pred eEEEEecCC---C---------------------------------------------------------CCccccHHHH
Confidence 789998753 0 0124699999
Q ss_pred HHHHHHHHHh-----ccCCcEEEEecCceec
Q 008324 236 TMGEMLMQQS-----KENLSLVIIRPTVVSG 261 (570)
Q Consensus 236 ~~aE~lv~~~-----~~~lp~~IvRPsiV~g 261 (570)
+..+.+.+.. ..++.+..+.|+.|..
T Consensus 145 aal~~~~~~la~e~~~~gI~v~~v~PG~v~t 175 (223)
T PRK05884 145 AALSNWTAGQAAVFGTRGITINAVACGRSVQ 175 (223)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEecCccCc
Confidence 9998888654 3578999999998754
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=5.9e-11 Score=119.55 Aligned_cols=221 Identities=15% Similarity=0.182 Sum_probs=135.3
Q ss_pred hcCCCEEEEECCcc--hhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 9 FLENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 9 ~~~~k~VlITGaTG--FlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
+++||+++||||++ -||+++++.|++.| .+|++..|+.+. .+.++ ++ ..+ ..+
T Consensus 3 ~l~~k~~lITGas~~~GIG~aia~~la~~G---~~vil~~r~~~~---~~~~~-~~---------~~~---------~~~ 57 (262)
T PRK07984 3 FLSGKRILVTGVASKLSIAYGIAQAMHREG---AELAFTYQNDKL---KGRVE-EF---------AAQ---------LGS 57 (262)
T ss_pred ccCCCEEEEeCCCCCccHHHHHHHHHHHCC---CEEEEEecchhH---HHHHH-HH---------Hhc---------cCC
Confidence 36899999999985 89999999999998 567776675321 11111 11 111 134
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc------------cccHHHHHHHhHHHHHHHHHH
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF------------DERYDVAFGINTLGVIHLVNF 147 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f------------~~~~~~~~~~Nv~gt~~ll~l 147 (570)
+.++.+|++++ +..+.++ ..+|++||+||.... .+.++..+++|+.|...+.+.
T Consensus 58 ~~~~~~Dl~~~-------~~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 130 (262)
T PRK07984 58 DIVLPCDVAED-------ASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKA 130 (262)
T ss_pred ceEeecCCCCH-------HHHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHH
Confidence 56788999953 3333322 358999999986421 123556789999999888887
Q ss_pred HHHc-cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCC
Q 008324 148 AKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHG 226 (570)
Q Consensus 148 a~~~-~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 226 (570)
+..+ .+-.++|.+||...... . +
T Consensus 131 ~~~~~~~~g~Iv~iss~~~~~~---------~-----------------------------------------------~ 154 (262)
T PRK07984 131 CRSMLNPGSALLTLSYLGAERA---------I-----------------------------------------------P 154 (262)
T ss_pred HHHHhcCCcEEEEEecCCCCCC---------C-----------------------------------------------C
Confidence 7654 12247888887642110 0 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeee
Q 008324 227 WPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMD 301 (570)
Q Consensus 227 ~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d 301 (570)
....|+.||+..+.+++.. ..++.+..+-|+.|-.+... .+ +. ........... .+ ..-
T Consensus 155 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~---~~-~~---~~~~~~~~~~~----~p-----~~r 218 (262)
T PRK07984 155 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAAS---GI-KD---FRKMLAHCEAV----TP-----IRR 218 (262)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHh---cC-Cc---hHHHHHHHHHc----CC-----CcC
Confidence 1347999999999988755 34799999999988664221 01 00 00111111110 00 112
Q ss_pred eeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 302 ~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+...+|++++++.++..... .-.++++.+.++
T Consensus 219 ~~~pedva~~~~~L~s~~~~-~itG~~i~vdgg 250 (262)
T PRK07984 219 TVTIEDVGNSAAFLCSDLSA-GISGEVVHVDGG 250 (262)
T ss_pred CCCHHHHHHHHHHHcCcccc-cccCcEEEECCC
Confidence 45679999999887753222 122566666554
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=6.9e-11 Score=118.85 Aligned_cols=221 Identities=18% Similarity=0.173 Sum_probs=135.5
Q ss_pred hcCCCEEEEECC--cchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 9 FLENKTILVSGV--TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 9 ~~~~k~VlITGa--TGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
+++||+++|||| ++-||++++++|++.| .+|++..|..+.. ++++ + +.++. ..
T Consensus 3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G---~~v~~~~~~~~~~---~~~~-~---------~~~~~---------~~ 57 (260)
T PRK06997 3 FLAGKRILITGLLSNRSIAYGIAKACKREG---AELAFTYVGDRFK---DRIT-E---------FAAEF---------GS 57 (260)
T ss_pred ccCCcEEEEeCCCCCCcHHHHHHHHHHHCC---CeEEEEccchHHH---HHHH-H---------HHHhc---------CC
Confidence 468999999996 6789999999999998 5666665542221 2222 1 11111 12
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc------------cccHHHHHHHhHHHHHHHHHH
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF------------DERYDVAFGINTLGVIHLVNF 147 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f------------~~~~~~~~~~Nv~gt~~ll~l 147 (570)
..++.+|++++ +..+.++ ..+|++||+||.... .+.++..+++|+.|+..+.+.
T Consensus 58 ~~~~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~ 130 (260)
T PRK06997 58 DLVFPCDVASD-------EQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKA 130 (260)
T ss_pred cceeeccCCCH-------HHHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHH
Confidence 24678999954 3232322 469999999987421 134566789999999999887
Q ss_pred HHH-ccCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCC
Q 008324 148 AKK-CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHG 226 (570)
Q Consensus 148 a~~-~~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 226 (570)
+.. +++-.++|++||..... . . +
T Consensus 131 ~lp~m~~~g~Ii~iss~~~~~--~-------~-----------------------------------------------~ 154 (260)
T PRK06997 131 ALPMLSDDASLLTLSYLGAER--V-------V-----------------------------------------------P 154 (260)
T ss_pred HHHhcCCCceEEEEecccccc--C-------C-----------------------------------------------C
Confidence 765 33335799998754211 0 0 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeee
Q 008324 227 WPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMD 301 (570)
Q Consensus 227 ~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d 301 (570)
....|+.||+..+.+.+.. ..++.+..+.|+.|-.+... .+.+ . ......... . . + ...
T Consensus 155 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~---~~~~-~---~~~~~~~~~-~---~---p--~~r 218 (260)
T PRK06997 155 NYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAAS---GIKD-F---GKILDFVES-N---A---P--LRR 218 (260)
T ss_pred CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhc---cccc-h---hhHHHHHHh-c---C---c--ccc
Confidence 1356999999998888754 34799999999988664321 1100 0 011111111 0 0 1 112
Q ss_pred eeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 302 ~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+...+++++++..++..... .-.++++.+.++
T Consensus 219 ~~~pedva~~~~~l~s~~~~-~itG~~i~vdgg 250 (260)
T PRK06997 219 NVTIEEVGNVAAFLLSDLAS-GVTGEITHVDSG 250 (260)
T ss_pred cCCHHHHHHHHHHHhCcccc-CcceeEEEEcCC
Confidence 46789999999988753222 123566666554
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.8e-10 Score=114.16 Aligned_cols=162 Identities=14% Similarity=0.057 Sum_probs=108.1
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+||||+|.||+.++++|++.| .+|+++.|++... +...++ +++ ..++.++.+
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~---~~~~~~---------l~~----------~~~~~~~~~ 55 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKG---ARVVISSRNEENL---EKALKE---------LKE----------YGEVYAVKA 55 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcC---CEEEEEeCCHHHH---HHHHHH---------HHh----------cCCceEEEc
Confidence 589999999999999999999998 5788888865321 111111 110 135778999
Q ss_pred cCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCC-----cc----ccHHHHHHHhHHHHHHHHHHHHH-c---c
Q 008324 93 DISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK-----FD----ERYDVAFGINTLGVIHLVNFAKK-C---V 152 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~-----f~----~~~~~~~~~Nv~gt~~ll~la~~-~---~ 152 (570)
|++++ +..+.++ ..+|+|||+||... +. +.+...+.+|+.++..+...+.. + .
T Consensus 56 Dv~d~-------~~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~ 128 (259)
T PRK08340 56 DLSDK-------DDLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKK 128 (259)
T ss_pred CCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcC
Confidence 99953 3222332 46899999999642 11 23445577888887666544321 1 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|++||....... +....|+
T Consensus 129 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~y~ 152 (259)
T PRK08340 129 MKGVLVYLSSVSVKEPM--------------------------------------------------------PPLVLAD 152 (259)
T ss_pred CCCEEEEEeCcccCCCC--------------------------------------------------------CCchHHH
Confidence 34589999987543211 1124699
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecC
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGT 262 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
.||+..+.+.+.. ..++.+..+.|+.|-.+
T Consensus 153 ~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~ 187 (259)
T PRK08340 153 VTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTP 187 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCc
Confidence 9999988888765 34788999999887654
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.22 E-value=3e-10 Score=113.78 Aligned_cols=164 Identities=16% Similarity=0.184 Sum_probs=109.4
Q ss_pred EEEEECCcchhHHHHHHHHHH----hCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 14 TILVSGVTGFVAKVFIEKILR----VQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~----~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.++||||||.||.+++++|++ .| .+|+++.|+... .+.+.+ .++...+ ..++.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g---~~V~~~~r~~~~---~~~~~~---------~l~~~~~-------~~~v~~ 59 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPG---SVLVLSARNDEA---LRQLKA---------EIGAERS-------GLRVVR 59 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCC---cEEEEEEcCHHH---HHHHHH---------HHHhcCC-------CceEEE
Confidence 589999999999999999997 46 678888886432 112211 1221111 246788
Q ss_pred EeccCCCCCCCCCchhhHHHHhCC-----------ccEEEEcCccCC-----cc-----ccHHHHHHHhHHHHHHHHHHH
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNE-----------LDIMVNSAAITK-----FD-----ERYDVAFGINTLGVIHLVNFA 148 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~-----------vdiViH~AA~v~-----f~-----~~~~~~~~~Nv~gt~~ll~la 148 (570)
+.+|++++ +..+.+++. .|+|||+||... +. +.++..+++|+.|+..+.+.+
T Consensus 60 ~~~Dl~~~-------~~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~ 132 (256)
T TIGR01500 60 VSLDLGAE-------AGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSV 132 (256)
T ss_pred EEeccCCH-------HHHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHH
Confidence 99999953 322232221 259999998632 11 345677999999998888776
Q ss_pred HHc-c---C-ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccc
Q 008324 149 KKC-V---K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAK 223 (570)
Q Consensus 149 ~~~-~---~-l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 223 (570)
... . + -.++|++||.......
T Consensus 133 ~~~l~~~~~~~~~iv~isS~~~~~~~------------------------------------------------------ 158 (256)
T TIGR01500 133 LKAFKDSPGLNRTVVNISSLCAIQPF------------------------------------------------------ 158 (256)
T ss_pred HHHHhhcCCCCCEEEEECCHHhCCCC------------------------------------------------------
Confidence 542 1 1 2479999987432211
Q ss_pred cCCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecC
Q 008324 224 LHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGT 262 (570)
Q Consensus 224 ~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
+....|+.||+..+.+.+.. ..++.+..+.||.|-.+
T Consensus 159 --~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~ 200 (256)
T TIGR01500 159 --KGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTD 200 (256)
T ss_pred --CCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccch
Confidence 11246999999999988764 35789999999988664
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.22 E-value=2e-10 Score=127.00 Aligned_cols=164 Identities=16% Similarity=0.179 Sum_probs=116.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.+||+++||||+|.||++++++|++.| .+|+++.|+.... +.+.+ +. ..++.+
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~---~~~~~-------------~~--------~~~~~~ 55 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAG---DQVVVADRNVERA---RERAD-------------SL--------GPDHHA 55 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHH-------------Hh--------CCceeE
Confidence 468999999999999999999999998 6788888864321 11111 10 245678
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCC-----c----cccHHHHHHHhHHHHHHHHHHHHHc--
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK-----F----DERYDVAFGINTLGVIHLVNFAKKC-- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~-----f----~~~~~~~~~~Nv~gt~~ll~la~~~-- 151 (570)
+.+|++++ +..+.++ ..+|++||+||... + .+.++..+++|+.|+..+++.+...
T Consensus 56 ~~~D~~~~-------~~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 128 (520)
T PRK06484 56 LAMDVSDE-------AQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMI 128 (520)
T ss_pred EEeccCCH-------HHHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 99999954 2222322 45899999998631 1 2346778999999999998887653
Q ss_pred -cCc-eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc
Q 008324 152 -VKL-KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (570)
Q Consensus 152 -~~l-~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
.+- .++|++||....... +...
T Consensus 129 ~~~~g~~iv~isS~~~~~~~--------------------------------------------------------~~~~ 152 (520)
T PRK06484 129 EQGHGAAIVNVASGAGLVAL--------------------------------------------------------PKRT 152 (520)
T ss_pred hcCCCCeEEEECCcccCCCC--------------------------------------------------------CCCc
Confidence 122 389999987543211 1135
Q ss_pred hHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCC
Q 008324 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (570)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~ 263 (570)
.|+.||+..+.+++.. ..+++++.+.|+.|-.+.
T Consensus 153 ~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~ 191 (520)
T PRK06484 153 AYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQM 191 (520)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchh
Confidence 7999999999987754 347999999999886654
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.7e-10 Score=108.54 Aligned_cols=261 Identities=16% Similarity=0.222 Sum_probs=173.1
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.-|..||||-||.=|+.|+|-||..|++ |-.++|....-. .+|++ .++.+|.- -........
T Consensus 27 ~rkvALITGItGQDGSYLaEfLL~KgYe---VHGiiRRsSsFN-T~RIe-HlY~nP~~-------------h~~~~mkLH 88 (376)
T KOG1372|consen 27 PRKVALITGITGQDGSYLAEFLLSKGYE---VHGIIRRSSSFN-TARIE-HLYSNPHT-------------HNGASMKLH 88 (376)
T ss_pred cceEEEEecccCCCchHHHHHHHhCCce---eeEEEeeccccc-hhhhh-hhhcCchh-------------cccceeEEe
Confidence 3457899999999999999999999954 556676543321 23433 23222211 112456778
Q ss_pred eccCCCCCCCCCchhhHHHHhC--CccEEEEcCccC----CccccHHHHHHHhHHHHHHHHHHHHHcc--CceEEEEEec
Q 008324 91 PGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAIT----KFDERYDVAFGINTLGVIHLVNFAKKCV--KLKVFVHVST 162 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v----~f~~~~~~~~~~Nv~gt~~ll~la~~~~--~l~~~V~vST 162 (570)
.||++ |...+..++. +.+-|+|+||.. +|+-+ +...++...||++||++.+.|. +--+|-..||
T Consensus 89 YgDmT-------Dss~L~k~I~~ikPtEiYnLaAQSHVkvSFdlp-eYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAst 160 (376)
T KOG1372|consen 89 YGDMT-------DSSCLIKLISTIKPTEVYNLAAQSHVKVSFDLP-EYTAEVDAVGTLRLLDAIRACRLTEKVRFYQAST 160 (376)
T ss_pred ecccc-------chHHHHHHHhccCchhhhhhhhhcceEEEeecc-cceeeccchhhhhHHHHHHhcCcccceeEEeccc
Confidence 99999 5555556665 478899999974 45433 3446788899999999999883 2247888999
Q ss_pred ceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHH
Q 008324 163 AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (570)
Q Consensus 163 a~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv 242 (570)
.-.||. +.|.|-.|.+|. -+.++|+.+|..+--++
T Consensus 161 SElyGk----v~e~PQsE~TPF-----------------------------------------yPRSPYa~aKmy~~Wiv 195 (376)
T KOG1372|consen 161 SELYGK----VQEIPQSETTPF-----------------------------------------YPRSPYAAAKMYGYWIV 195 (376)
T ss_pred Hhhccc----ccCCCcccCCCC-----------------------------------------CCCChhHHhhhhheEEE
Confidence 988884 334444333332 34578999998887665
Q ss_pred HHhc--cCCcEEEEecCceecCCCCCCCccccCc--cchHHHHHHHhcCCce-eeecCCCeeeeeeehHHHHHHHHHHHH
Q 008324 243 QQSK--ENLSLVIIRPTVVSGTYKEPFPGWVEDL--KTINTLFVASAQGNLR-CLVGETKVIMDVIPVDMVVNAMIVAMV 317 (570)
Q Consensus 243 ~~~~--~~lp~~IvRPsiV~g~~~ep~~gw~~~~--~~~~~~i~~~~~G~~~-~~~~~~~~~~d~VpVDdva~aii~a~~ 317 (570)
..+. .++= ..-||.+...+ |--| +|+ .-++..+..+..|... ...|+-+..+||-+..|-+.||...+.
T Consensus 196 vNyREAYnmf---AcNGILFNHES-PRRG--enFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW~mLQ 269 (376)
T KOG1372|consen 196 VNYREAYNMF---ACNGILFNHES-PRRG--ENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMWLMLQ 269 (376)
T ss_pred EEhHHhhcce---eeccEeecCCC-Cccc--cchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHHHHHHh
Confidence 4442 2221 12344554322 3222 333 3344455555556544 456888999999999999999988875
Q ss_pred HhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 318 AHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 318 ~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
... ..=|-+.++ +..|..++++....+.|+.
T Consensus 270 ~d~-----PdDfViATg--e~hsVrEF~~~aF~~ig~~ 300 (376)
T KOG1372|consen 270 QDS-----PDDFVIATG--EQHSVREFCNLAFAEIGEV 300 (376)
T ss_pred cCC-----CCceEEecC--CcccHHHHHHHHHHhhCcE
Confidence 332 234889998 8899999999988887753
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.1e-10 Score=117.34 Aligned_cols=131 Identities=17% Similarity=0.158 Sum_probs=86.0
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+|+++||||||.||.++++.|++.|+ .+|+++.|+.... +.+.++ +.. ...++..+
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~--~~V~l~~r~~~~~---~~~~~~---------l~~---------~~~~~~~~ 58 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGE--WHVIMACRDFLKA---EQAAKS---------LGM---------PKDSYTIM 58 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC--CEEEEEeCCHHHH---HHHHHH---------hcC---------CCCeEEEE
Confidence 378999999999999999999999873 4678888864321 111111 100 02467788
Q ss_pred eccCCCCCCCCCchhhHHHH---hCCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHH-cc----Cc
Q 008324 91 PGDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKK-CV----KL 154 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l---~~~vdiViH~AA~v~f--------~~~~~~~~~~Nv~gt~~ll~la~~-~~----~l 154 (570)
.+|+++++-- ....+.+ ...+|++||+||.... .+.++..+++|+.|+..+.+.+.. +. +-
T Consensus 59 ~~Dl~~~~~v---~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~ 135 (314)
T TIGR01289 59 HLDLGSLDSV---RQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKD 135 (314)
T ss_pred EcCCCCHHHH---HHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCC
Confidence 9999954210 1111112 2459999999996421 134667789999998888776543 21 13
Q ss_pred eEEEEEecceeec
Q 008324 155 KVFVHVSTAYVAG 167 (570)
Q Consensus 155 ~~~V~vSTa~v~~ 167 (570)
.++|++||...+.
T Consensus 136 g~IV~vsS~~~~~ 148 (314)
T TIGR01289 136 KRLIIVGSITGNT 148 (314)
T ss_pred CeEEEEecCcccc
Confidence 5899999986654
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.19 E-value=1e-10 Score=106.19 Aligned_cols=168 Identities=21% Similarity=0.209 Sum_probs=127.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++++++||.||||-.|..|++.++++ |...+||++.|.+....+ ..+++..
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~-~~FSKV~~i~RR~~~d~a----------------------------t~k~v~q 66 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEA-PQFSKVYAILRRELPDPA----------------------------TDKVVAQ 66 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhc-ccceeEEEEEeccCCCcc----------------------------ccceeee
Confidence 56789999999999999999999986 578999999997522111 1356777
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCC
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~ 169 (570)
+..|.++ -+....-..++|+.|.+-|+++.....+-.+++...-...+.++|++- +++.|+.+||+.+....
T Consensus 67 ~~vDf~K-------l~~~a~~~qg~dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~-Gck~fvLvSS~GAd~sS 138 (238)
T KOG4039|consen 67 VEVDFSK-------LSQLATNEQGPDVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEK-GCKTFVLVSSAGADPSS 138 (238)
T ss_pred EEechHH-------HHHHHhhhcCCceEEEeecccccccccCceEeechHHHHHHHHHHHhC-CCeEEEEEeccCCCccc
Confidence 8888773 333335567899999999999876666667788888888899999985 99999999998543321
Q ss_pred CcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccCC
Q 008324 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENL 249 (570)
Q Consensus 170 ~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~l 249 (570)
.-.|-.+|...|+-+.+...+
T Consensus 139 ----------------------------------------------------------rFlY~k~KGEvE~~v~eL~F~- 159 (238)
T KOG4039|consen 139 ----------------------------------------------------------RFLYMKMKGEVERDVIELDFK- 159 (238)
T ss_pred ----------------------------------------------------------ceeeeeccchhhhhhhhcccc-
Confidence 113778888899888775322
Q ss_pred cEEEEecCceecCCCCCCC-ccccC
Q 008324 250 SLVIIRPTVVSGTYKEPFP-GWVED 273 (570)
Q Consensus 250 p~~IvRPsiV~g~~~ep~~-gw~~~ 273 (570)
.++|+||+.+.|...+.-+ +|..+
T Consensus 160 ~~~i~RPG~ll~~R~esr~geflg~ 184 (238)
T KOG4039|consen 160 HIIILRPGPLLGERTESRQGEFLGN 184 (238)
T ss_pred EEEEecCcceecccccccccchhhh
Confidence 5899999999998876544 35544
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.18 E-value=6.1e-10 Score=103.61 Aligned_cols=124 Identities=25% Similarity=0.324 Sum_probs=90.5
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+||||+|-||+.++++|++.|. ++|+++.|+. ..++.+ ++ .+.++.. ..++.++.+
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~--~~v~~~~r~~----~~~~~~-~l-----~~~l~~~---------~~~~~~~~~ 59 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGA--RVVILTSRSE----DSEGAQ-EL-----IQELKAP---------GAKITFIEC 59 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTT--EEEEEEESSC----HHHHHH-HH-----HHHHHHT---------TSEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCc--eEEEEeeecc----cccccc-cc-----ccccccc---------ccccccccc
Confidence 6899999999999999999999853 6788888871 112211 11 1122211 368899999
Q ss_pred cCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHccCceEEE
Q 008324 93 DISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V 158 (570)
|++++ +..+.++ ..+|++||+|+.... .+.++..+++|+.+...+.+++.. ++-..+|
T Consensus 60 D~~~~-------~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~g~iv 131 (167)
T PF00106_consen 60 DLSDP-------ESIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP-QGGGKIV 131 (167)
T ss_dssp ETTSH-------HHHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH-HTTEEEE
T ss_pred ccccc-------ccccccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehhee-ccccceE
Confidence 99953 3333333 368999999998752 245677899999999999999988 5778999
Q ss_pred EEeccee
Q 008324 159 HVSTAYV 165 (570)
Q Consensus 159 ~vSTa~v 165 (570)
.+||...
T Consensus 132 ~~sS~~~ 138 (167)
T PF00106_consen 132 NISSIAG 138 (167)
T ss_dssp EEEEGGG
T ss_pred Eecchhh
Confidence 9998753
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=9.9e-10 Score=113.13 Aligned_cols=172 Identities=15% Similarity=0.083 Sum_probs=112.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcc-------cHHHHHHHHHhhhhhHHHHHhhhccccccc
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID-------SAALRFQNEVLAKDVFNVLKEKWGTRLNSF 82 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~-------~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~ 82 (570)
++||+++||||++.||+++++.|++.| .+|++..|+..+. ...+.+.+ .+.. .
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la~~G---~~Vv~~~r~~~~~~~~~~~~~~~~~~~~---------~l~~-~------- 65 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELGAAG---ATVYVTGRSTRARRSEYDRPETIEETAE---------LVTA-A------- 65 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEecccccccccccccchHHHHHH---------HHHh-c-------
Confidence 579999999999999999999999988 6788888874321 11111111 1111 0
Q ss_pred cCCceEEEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcC-ccC-------Cc----cccHHHHHHHhHHHHHH
Q 008324 83 ISEKITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSA-AIT-------KF----DERYDVAFGINTLGVIH 143 (570)
Q Consensus 83 ~~~kv~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~A-A~v-------~f----~~~~~~~~~~Nv~gt~~ 143 (570)
..++.++.+|+++++ ..+.++ ..+|++||+| +.. .+ .+.+...+++|+.|+..
T Consensus 66 -~~~~~~~~~Dv~~~~-------~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 137 (305)
T PRK08303 66 -GGRGIAVQVDHLVPE-------QVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLI 137 (305)
T ss_pred -CCceEEEEcCCCCHH-------HHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHH
Confidence 245778999999642 222222 3589999999 632 11 12355668899999988
Q ss_pred HHHHHHH-cc--CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhcccc
Q 008324 144 LVNFAKK-CV--KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTE 220 (570)
Q Consensus 144 ll~la~~-~~--~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 220 (570)
+.+++.. +. +-.++|.+||....-... .+
T Consensus 138 ~~~~~lp~m~~~~~g~IV~isS~~~~~~~~------~~------------------------------------------ 169 (305)
T PRK08303 138 TSHFALPLLIRRPGGLVVEITDGTAEYNAT------HY------------------------------------------ 169 (305)
T ss_pred HHHHHHHHhhhCCCcEEEEECCccccccCc------CC------------------------------------------
Confidence 8877754 21 225788998853211000 00
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecC
Q 008324 221 RAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGT 262 (570)
Q Consensus 221 ~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
.....|+.||+..+.+.+.. ..++.+..+.||.|-.+
T Consensus 170 -----~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~ 211 (305)
T PRK08303 170 -----RLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSE 211 (305)
T ss_pred -----CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccH
Confidence 01235999999998887654 34799999999887654
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.8e-09 Score=107.10 Aligned_cols=201 Identities=14% Similarity=0.184 Sum_probs=129.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.+|+.||||||++.+|+.++.+++++| .++.+....+++....-+ ++ ++ ..++..
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg---~~~vl~Din~~~~~etv~---~~---------~~----------~g~~~~ 90 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRG---AKLVLWDINKQGNEETVK---EI---------RK----------IGEAKA 90 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhC---CeEEEEeccccchHHHHH---HH---------Hh----------cCceeE
Confidence 578999999999999999999999998 566777776655422211 11 10 036788
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHH-Hc--cCceEEEE
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAK-KC--VKLKVFVH 159 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~-~~--~~l~~~V~ 159 (570)
..+|+++++---.-.+..++-..++|+++|.||.+.. ++..+..+++|+.|.....++-. +| .+-.++|-
T Consensus 91 y~cdis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~ 170 (300)
T KOG1201|consen 91 YTCDISDREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVT 170 (300)
T ss_pred EEecCCCHHHHHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEE
Confidence 9999996421100111111223469999999999853 35577889999999877655432 22 14457888
Q ss_pred EecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHH
Q 008324 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (570)
Q Consensus 160 vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE 239 (570)
++|+.-..... .--.|+.||+.+.
T Consensus 171 IaS~aG~~g~~--------------------------------------------------------gl~~YcaSK~a~v 194 (300)
T KOG1201|consen 171 IASVAGLFGPA--------------------------------------------------------GLADYCASKFAAV 194 (300)
T ss_pred ehhhhcccCCc--------------------------------------------------------cchhhhhhHHHHH
Confidence 88764332211 1246999999886
Q ss_pred HHHHHh--------ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHH
Q 008324 240 MLMQQS--------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (570)
Q Consensus 240 ~lv~~~--------~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~a 311 (570)
-+-++. ..++.++.+-|..+=... ++ | ...-......++.++||+.
T Consensus 195 GfhesL~~EL~~~~~~~IktTlv~P~~i~Tgm-------f~--------------~-----~~~~~~l~P~L~p~~va~~ 248 (300)
T KOG1201|consen 195 GFHESLSMELRALGKDGIKTTLVCPYFINTGM-------FD--------------G-----ATPFPTLAPLLEPEYVAKR 248 (300)
T ss_pred HHHHHHHHHHHhcCCCCeeEEEEeeeeccccc-------cC--------------C-----CCCCccccCCCCHHHHHHH
Confidence 654432 346888888887664211 01 1 0111234567899999999
Q ss_pred HHHHHH
Q 008324 312 MIVAMV 317 (570)
Q Consensus 312 ii~a~~ 317 (570)
++.+..
T Consensus 249 Iv~ai~ 254 (300)
T KOG1201|consen 249 IVEAIL 254 (300)
T ss_pred HHHHHH
Confidence 999886
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.3e-09 Score=110.60 Aligned_cols=169 Identities=20% Similarity=0.210 Sum_probs=108.9
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.-+..+|||+||||-+|+.+++.|+++| ..|++++|+..+.....+.. .......
T Consensus 76 ~~~~~~VlVvGatG~vG~~iv~~llkrg---f~vra~VRd~~~a~~~~~~~----------------------~~d~~~~ 130 (411)
T KOG1203|consen 76 SKKPTTVLVVGATGKVGRRIVKILLKRG---FSVRALVRDEQKAEDLLGVF----------------------FVDLGLQ 130 (411)
T ss_pred CCCCCeEEEecCCCchhHHHHHHHHHCC---CeeeeeccChhhhhhhhccc----------------------ccccccc
Confidence 3455799999999999999999999999 67899999876543221100 0113444
Q ss_pred EEeccCCCCCCCCCchhhHHHHhCC----ccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecce
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWNE----LDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~----vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~ 164 (570)
.+..|... ..|....+.+. +.+|+-|++...-.+....-..+...|+++++++|+.+ +++++|++|+..
T Consensus 131 ~v~~~~~~------~~d~~~~~~~~~~~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~a-Gvk~~vlv~si~ 203 (411)
T KOG1203|consen 131 NVEADVVT------AIDILKKLVEAVPKGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKA-GVKRVVLVGSIG 203 (411)
T ss_pred eeeecccc------ccchhhhhhhhccccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHh-CCceEEEEEeec
Confidence 55555543 23333344443 34566665543322212233568889999999999998 999999998764
Q ss_pred eecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHH
Q 008324 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (570)
Q Consensus 165 v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~ 244 (570)
..-... +... . ...-.+..+|.++|..+.+
T Consensus 204 ~~~~~~------------~~~~---~-----------------------------------~~~~~~~~~k~~~e~~~~~ 233 (411)
T KOG1203|consen 204 GTKFNQ------------PPNI---L-----------------------------------LLNGLVLKAKLKAEKFLQD 233 (411)
T ss_pred CcccCC------------Cchh---h-----------------------------------hhhhhhhHHHHhHHHHHHh
Confidence 332110 0000 0 0001244788999999987
Q ss_pred hccCCcEEEEecCceec
Q 008324 245 SKENLSLVIIRPTVVSG 261 (570)
Q Consensus 245 ~~~~lp~~IvRPsiV~g 261 (570)
.+++.+||||+.-.-
T Consensus 234 --Sgl~ytiIR~g~~~~ 248 (411)
T KOG1203|consen 234 --SGLPYTIIRPGGLEQ 248 (411)
T ss_pred --cCCCcEEEecccccc
Confidence 899999999987543
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.08 E-value=1e-09 Score=103.93 Aligned_cols=225 Identities=17% Similarity=0.116 Sum_probs=151.0
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
..+++.|+.||.|.+++..-...+ ..|..|.|+..... ++ .....+..+.|
T Consensus 53 e~tlvlggnpfsgs~vlk~A~~vv---~svgilsen~~k~~-l~-------------------------sw~~~vswh~g 103 (283)
T KOG4288|consen 53 EWTLVLGGNPFSGSEVLKNATNVV---HSVGILSENENKQT-LS-------------------------SWPTYVSWHRG 103 (283)
T ss_pred HHHhhhcCCCcchHHHHHHHHhhc---eeeeEeecccCcch-hh-------------------------CCCcccchhhc
Confidence 357899999999999999888876 67788889876321 11 11367778888
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCCcc
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~g~ 172 (570)
|... .+.......++..|+.+++-. .+...+.++|-....+..++|.+. ++++|+|+|...-.-
T Consensus 104 nsfs-------sn~~k~~l~g~t~v~e~~ggf---gn~~~m~~ing~ani~a~kaa~~~-gv~~fvyISa~d~~~----- 167 (283)
T KOG4288|consen 104 NSFS-------SNPNKLKLSGPTFVYEMMGGF---GNIILMDRINGTANINAVKAAAKA-GVPRFVYISAHDFGL----- 167 (283)
T ss_pred cccc-------cCcchhhhcCCcccHHHhcCc---cchHHHHHhccHhhHHHHHHHHHc-CCceEEEEEhhhcCC-----
Confidence 8773 332334556788888887642 334556778888888888899886 999999999653211
Q ss_pred cccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccCCcEE
Q 008324 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLV 252 (570)
Q Consensus 173 i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp~~ 252 (570)
++ --|..|-.+|..||..+.+. .++.-+
T Consensus 168 ---------~~------------------------------------------~i~rGY~~gKR~AE~Ell~~-~~~rgi 195 (283)
T KOG4288|consen 168 ---------PP------------------------------------------LIPRGYIEGKREAEAELLKK-FRFRGI 195 (283)
T ss_pred ---------CC------------------------------------------ccchhhhccchHHHHHHHHh-cCCCce
Confidence 11 12457999999999988775 347889
Q ss_pred EEecCceecCCCCCCCccccCccchHHHHHHHhcCC---ceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceE
Q 008324 253 IIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGN---LRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIY 329 (570)
Q Consensus 253 IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~---~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iy 329 (570)
|+|||.+||.. +..|---.+......+....++. +..++.-+...+..|+|++||.+.+.++.+.. |
T Consensus 196 ilRPGFiyg~R--~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~--------f 265 (283)
T KOG4288|consen 196 ILRPGFIYGTR--NVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPD--------F 265 (283)
T ss_pred eeccceeeccc--ccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCC--------c
Confidence 99999999983 33332222222222222333332 34455556678899999999999998885221 2
Q ss_pred EecCCCCCcccHHHHHHHHhh
Q 008324 330 HVGSSLRNPVTLVSILDYGFV 350 (570)
Q Consensus 330 ni~s~~~~pit~~~l~~~i~~ 350 (570)
- .+++..++.++..+
T Consensus 266 ~------Gvv~i~eI~~~a~k 280 (283)
T KOG4288|consen 266 K------GVVTIEEIKKAAHK 280 (283)
T ss_pred C------ceeeHHHHHHHHHH
Confidence 1 25777777666543
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.7e-09 Score=106.32 Aligned_cols=170 Identities=17% Similarity=0.141 Sum_probs=107.3
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+++||||++.||++++++|.+ | .+|+++.|+.... +.+.+ .+++. + ..++.++.+
T Consensus 1 ~~vlItGas~GIG~aia~~l~~-g---~~Vil~~r~~~~~---~~~~~---------~l~~~-~-------~~~~~~~~~ 56 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLCH-G---EDVVLAARRPEAA---QGLAS---------DLRQR-G-------ATSVHVLSF 56 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHhC-C---CEEEEEeCCHHHH---HHHHH---------HHHhc-c-------CCceEEEEc
Confidence 5799999999999999999984 7 6788888864321 22221 12111 1 135778999
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHH-Hcc---CceEEEEEe
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAK-KCV---KLKVFVHVS 161 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~-------~~~~~~~~~Nv~gt~~ll~la~-~~~---~l~~~V~vS 161 (570)
|+++++---...+...+....+|++||+||..... +.......+|+.+...++..+. .+. +-.++|.+|
T Consensus 57 Dv~d~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~is 136 (246)
T PRK05599 57 DAQDLDTHRELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFS 136 (246)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 99965321111111112234699999999975321 1233456788888877765542 221 135799999
Q ss_pred cceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHH
Q 008324 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (570)
Q Consensus 162 Ta~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~l 241 (570)
|....... +....|+.||+..+.+
T Consensus 137 S~~~~~~~--------------------------------------------------------~~~~~Y~asKaa~~~~ 160 (246)
T PRK05599 137 SIAGWRAR--------------------------------------------------------RANYVYGSTKAGLDAF 160 (246)
T ss_pred ccccccCC--------------------------------------------------------cCCcchhhHHHHHHHH
Confidence 87432111 1124699999988887
Q ss_pred HHHh-----ccCCcEEEEecCceecC
Q 008324 242 MQQS-----KENLSLVIIRPTVVSGT 262 (570)
Q Consensus 242 v~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
.+.. ..++.+..+.|+.|.++
T Consensus 161 ~~~la~el~~~~I~v~~v~PG~v~T~ 186 (246)
T PRK05599 161 CQGLADSLHGSHVRLIIARPGFVIGS 186 (246)
T ss_pred HHHHHHHhcCCCceEEEecCCcccch
Confidence 7654 35788999999988764
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=8.2e-09 Score=101.66 Aligned_cols=163 Identities=13% Similarity=0.092 Sum_probs=108.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++-||+.++++|++.| .+|++..|+.... +.+. +.+++. ..++..
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G---~~V~~~~r~~~~l---~~~~---------~~i~~~---------~~~~~~ 58 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLG---ATLILCDQDQSAL---KDTY---------EQCSAL---------TDNVYS 58 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCC---CEEEEEcCCHHHH---HHHH---------HHHHhc---------CCCeEE
Confidence 468999999999999999999999998 5678888864321 1111 111110 245677
Q ss_pred EeccCCCCCCCCCchhhHHHH-------hC-CccEEEEcCccCC----cc----ccHHHHHHHhHHHHHHHHHHHHH-cc
Q 008324 90 VPGDISSEDLGLKDSNLKEEL-------WN-ELDIMVNSAAITK----FD----ERYDVAFGINTLGVIHLVNFAKK-CV 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~-~vdiViH~AA~v~----f~----~~~~~~~~~Nv~gt~~ll~la~~-~~ 152 (570)
+..|++++ +..+.+ +. .+|++||+||... +. +.+...+++|+.++..+++.+.. +.
T Consensus 59 ~~~D~~~~-------~~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~ 131 (227)
T PRK08862 59 FQLKDFSQ-------ESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMR 131 (227)
T ss_pred EEccCCCH-------HHHHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 88999854 222222 24 6999999997432 21 23445677898888877665543 31
Q ss_pred ---CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc
Q 008324 153 ---KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (570)
Q Consensus 153 ---~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
+-..+|++||.... . ...
T Consensus 132 ~~~~~g~Iv~isS~~~~---~--------------------------------------------------------~~~ 152 (227)
T PRK08862 132 KRNKKGVIVNVISHDDH---Q--------------------------------------------------------DLT 152 (227)
T ss_pred hcCCCceEEEEecCCCC---C--------------------------------------------------------Ccc
Confidence 13578899874211 0 013
Q ss_pred hHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecC
Q 008324 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGT 262 (570)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
.|+.||+..+.+.+.. ..++.+..+.||.|-..
T Consensus 153 ~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 153 GVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence 5999999888887654 35799999999988765
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.02 E-value=3e-09 Score=109.01 Aligned_cols=187 Identities=22% Similarity=0.230 Sum_probs=122.7
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC-CcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA-DIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~-~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.+.|++++|||||..||...+++|.++| .+|++..|+. ++....+++. .+ ....++
T Consensus 32 ~~~~~~~vVTGansGIG~eta~~La~~G---a~Vv~~~R~~~~~~~~~~~i~-------------~~-------~~~~~i 88 (314)
T KOG1208|consen 32 DLSGKVALVTGATSGIGFETARELALRG---AHVVLACRNEERGEEAKEQIQ-------------KG-------KANQKI 88 (314)
T ss_pred cCCCcEEEEECCCCchHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHHHHH-------------hc-------CCCCce
Confidence 4678999999999999999999999999 8899999986 3333333333 11 124678
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc----c-ccHHHHHHHhHHHHHHHHHHHH----HccCceEEE
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF----D-ERYDVAFGINTLGVIHLVNFAK----KCVKLKVFV 158 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f----~-~~~~~~~~~Nv~gt~~ll~la~----~~~~l~~~V 158 (570)
.++.+|+++...-..-.+.........|+.|+.||...- . +..+..+.+|+.|...|.++.. .. ...|+|
T Consensus 89 ~~~~lDLssl~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s-~~~RIV 167 (314)
T KOG1208|consen 89 RVIQLDLSSLKSVRKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRS-APSRIV 167 (314)
T ss_pred EEEECCCCCHHHHHHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhC-CCCCEE
Confidence 899999996432222222221223458999999998632 2 4578889999999887766554 33 226999
Q ss_pred EEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHH
Q 008324 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (570)
Q Consensus 159 ~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~a 238 (570)
.|||... +... . + ..++.+ . .........|..||..-
T Consensus 168 ~vsS~~~-~~~~-~-----~---~~l~~~---------------------~------------~~~~~~~~~Y~~SKla~ 204 (314)
T KOG1208|consen 168 NVSSILG-GGKI-D-----L---KDLSGE---------------------K------------AKLYSSDAAYALSKLAN 204 (314)
T ss_pred EEcCccc-cCcc-c-----h---hhccch---------------------h------------ccCccchhHHHHhHHHH
Confidence 9999754 1100 0 0 000000 0 00012223699999987
Q ss_pred HHHHHHh----ccCCcEEEEecCceecC
Q 008324 239 EMLMQQS----KENLSLVIIRPTVVSGT 262 (570)
Q Consensus 239 E~lv~~~----~~~lp~~IvRPsiV~g~ 262 (570)
.....+. ..++-+..+.||.|.+.
T Consensus 205 ~l~~~eL~k~l~~~V~~~~~hPG~v~t~ 232 (314)
T KOG1208|consen 205 VLLANELAKRLKKGVTTYSVHPGVVKTT 232 (314)
T ss_pred HHHHHHHHHHhhcCceEEEECCCccccc
Confidence 7666655 34788999999998886
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.02 E-value=7.3e-09 Score=104.46 Aligned_cols=178 Identities=21% Similarity=0.227 Sum_probs=121.4
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCccc-HHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS-AALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~-~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.++||+++||||+.-||++++++|.+.| .+|++..|+..... ..+.+. . .. ....++
T Consensus 5 ~l~gkvalVTG~s~GIG~aia~~la~~G---a~v~i~~r~~~~~~~~~~~~~----~---------~~------~~~~~~ 62 (270)
T KOG0725|consen 5 RLAGKVALVTGGSSGIGKAIALLLAKAG---AKVVITGRSEERLEETAQELG----G---------LG------YTGGKV 62 (270)
T ss_pred cCCCcEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHH----h---------cC------CCCCee
Confidence 4789999999999999999999999999 78888888764321 111111 0 00 013678
Q ss_pred EEEeccCCCCCCCCCchhhH-HHHhCCccEEEEcCccCCc--------cccHHHHHHHhHHH-HHHHHHHHHHcc---Cc
Q 008324 88 TFVPGDISSEDLGLKDSNLK-EELWNELDIMVNSAAITKF--------DERYDVAFGINTLG-VIHLVNFAKKCV---KL 154 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~-~~l~~~vdiViH~AA~v~f--------~~~~~~~~~~Nv~g-t~~ll~la~~~~---~l 154 (570)
.++.+|++++.--....+.. +....++|+++|.||.... .+.++..+++|+.| +.++...|..+- +-
T Consensus 63 ~~~~~Dv~~~~~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~g 142 (270)
T KOG0725|consen 63 LAIVCDVSKEVDVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKG 142 (270)
T ss_pred EEEECcCCCHHHHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCC
Confidence 99999999532100000011 1113469999999998642 24577889999995 777777776651 33
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
..++.+||........ +.+..|+.|
T Consensus 143 g~I~~~ss~~~~~~~~-------------------------------------------------------~~~~~Y~~s 167 (270)
T KOG0725|consen 143 GSIVNISSVAGVGPGP-------------------------------------------------------GSGVAYGVS 167 (270)
T ss_pred ceEEEEeccccccCCC-------------------------------------------------------CCcccchhH
Confidence 4677777764332211 122579999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceecCC
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~ 263 (570)
|+.-+++.+.. ..++++..+-|+.|..+.
T Consensus 168 K~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~ 201 (270)
T KOG0725|consen 168 KAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL 201 (270)
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence 99999998765 558999999999998875
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.7e-08 Score=95.75 Aligned_cols=123 Identities=15% Similarity=0.254 Sum_probs=82.9
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC-CcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA-DIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~-~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
+++||||+|-||..+++.|.+++. .+|+++.|+. ......+.+. .+++. ..+|.++.+
T Consensus 2 tylitGG~gglg~~la~~La~~~~--~~~il~~r~~~~~~~~~~~i~----------~l~~~---------g~~v~~~~~ 60 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGA--RRLILLGRSGAPSAEAEAAIR----------ELESA---------GARVEYVQC 60 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT---SEEEEEESSGGGSTTHHHHHH----------HHHHT---------T-EEEEEE-
T ss_pred EEEEECCccHHHHHHHHHHHHcCC--CEEEEeccCCCccHHHHHHHH----------HHHhC---------CCceeeecc
Confidence 689999999999999999999873 7899999983 2333322222 22221 368899999
Q ss_pred cCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHccCceEEE
Q 008324 93 DISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V 158 (570)
|+++ ++....+++ .++.|||+|+.... .+.++..+..-+.|+.+|.++.... .++.||
T Consensus 61 Dv~d-------~~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~-~l~~~i 132 (181)
T PF08659_consen 61 DVTD-------PEAVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR-PLDFFI 132 (181)
T ss_dssp -TTS-------HHHHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT-TTSEEE
T ss_pred CccC-------HHHHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC-CCCeEE
Confidence 9995 444445442 47899999998642 1345666888999999999999884 899999
Q ss_pred EEeccee
Q 008324 159 HVSTAYV 165 (570)
Q Consensus 159 ~vSTa~v 165 (570)
.+||...
T Consensus 133 ~~SSis~ 139 (181)
T PF08659_consen 133 LFSSISS 139 (181)
T ss_dssp EEEEHHH
T ss_pred EECChhH
Confidence 9999754
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.3e-08 Score=105.00 Aligned_cols=121 Identities=15% Similarity=0.155 Sum_probs=80.7
Q ss_pred EEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccCC
Q 008324 16 LVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDIS 95 (570)
Q Consensus 16 lITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl~ 95 (570)
+||||||.||.+++++|++.|. .+|++..|+.... +.+.+++ . . ...++.++.+|++
T Consensus 1 lITGas~GIG~aia~~l~~~G~--~~V~~~~r~~~~~---~~~~~~l---------~----~-----~~~~~~~~~~Dl~ 57 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGK--WHVVMACRDFLKA---ERAAKSA---------G----M-----PKDSYTVMHLDLA 57 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCC--CEEEEEeCCHHHH---HHHHHHh---------c----C-----CCCeEEEEEecCC
Confidence 5999999999999999999873 4677877764221 1111111 0 0 0246778899999
Q ss_pred CCCCCCCchhhHHHHh-------CCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHH-cc--C--ce
Q 008324 96 SEDLGLKDSNLKEELW-------NELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKK-CV--K--LK 155 (570)
Q Consensus 96 ~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~----f----~~~~~~~~~~Nv~gt~~ll~la~~-~~--~--l~ 155 (570)
++ +..+.++ ..+|++||+||... + .+.++..+++|+.|+..+++.+.. +. + -.
T Consensus 58 d~-------~~v~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g 130 (308)
T PLN00015 58 SL-------DSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSK 130 (308)
T ss_pred CH-------HHHHHHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCC
Confidence 53 3222322 35899999999742 1 134667899999998888776543 21 2 35
Q ss_pred EEEEEecceee
Q 008324 156 VFVHVSTAYVA 166 (570)
Q Consensus 156 ~~V~vSTa~v~ 166 (570)
++|++||...+
T Consensus 131 ~IV~vsS~~~~ 141 (308)
T PLN00015 131 RLIIVGSITGN 141 (308)
T ss_pred EEEEEeccccc
Confidence 89999997543
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.7e-08 Score=100.44 Aligned_cols=173 Identities=21% Similarity=0.273 Sum_probs=111.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccC-CceE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS-EKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~-~kv~ 88 (570)
+.+|+|+||||++-||+.++++|++.| .+|+++.|..... ..+.+.+. .. . . . ..+.
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G---~~v~~~~~~~~~~-~~~~~~~~---------~~-~-~-------~~~~~~ 60 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREG---ARVVVAARRSEEE-AAEALAAA---------IK-E-A-------GGGRAA 60 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CeEEEEcCCCchh-hHHHHHHH---------HH-h-c-------CCCcEE
Confidence 468999999999999999999999888 6767777765432 11111100 00 0 0 1 3577
Q ss_pred EEeccCCC-CCCCCCchhhHHHHhCCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 89 FVPGDISS-EDLGLKDSNLKEELWNELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 89 ~v~gDl~~-~~lgls~~~~~~~l~~~vdiViH~AA~v~----f----~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
+...|+++ +.......+........+|+++|+||... + .+.++..+++|+.|...+.+++...-.-+++|.
T Consensus 61 ~~~~Dvs~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~ 140 (251)
T COG1028 61 AVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVN 140 (251)
T ss_pred EEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEE
Confidence 78899995 21100001111112234899999999743 2 245677899999999999885554211128888
Q ss_pred EecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHH
Q 008324 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (570)
Q Consensus 160 vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE 239 (570)
+||.... ...+ ....|..||+..+
T Consensus 141 isS~~~~-~~~~-------------------------------------------------------~~~~Y~~sK~al~ 164 (251)
T COG1028 141 ISSVAGL-GGPP-------------------------------------------------------GQAAYAASKAALI 164 (251)
T ss_pred ECCchhc-CCCC-------------------------------------------------------CcchHHHHHHHHH
Confidence 9887543 2110 0246999999988
Q ss_pred HHHHHh-----ccCCcEEEEecCcee
Q 008324 240 MLMQQS-----KENLSLVIIRPTVVS 260 (570)
Q Consensus 240 ~lv~~~-----~~~lp~~IvRPsiV~ 260 (570)
.+.... ..++.+..+-|+.+-
T Consensus 165 ~~~~~l~~e~~~~gi~v~~v~PG~~~ 190 (251)
T COG1028 165 GLTKALALELAPRGIRVNAVAPGYID 190 (251)
T ss_pred HHHHHHHHHHhhhCcEEEEEEeccCC
Confidence 877654 357889999999544
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.88 E-value=2.8e-09 Score=96.68 Aligned_cols=206 Identities=21% Similarity=0.247 Sum_probs=138.5
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.++.|+.|++||+.-.||+.++..|...| .+|+++.|.+... +.|..+.| ..|
T Consensus 3 t~laG~~vlvTgagaGIG~~~v~~La~aG---A~ViAvaR~~a~L----------------~sLV~e~p--------~~I 55 (245)
T KOG1207|consen 3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAG---AQVIAVARNEANL----------------LSLVKETP--------SLI 55 (245)
T ss_pred ccccceEEEeecccccccHHHHHHHHhcC---CEEEEEecCHHHH----------------HHHHhhCC--------cce
Confidence 46789999999999999999999999999 7889999975432 22222322 458
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhCC---ccEEEEcCccCC---cc----ccHHHHHHHhHHHHHHHHHHHHHc----cC
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELWNE---LDIMVNSAAITK---FD----ERYDVAFGINTLGVIHLVNFAKKC----VK 153 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~---vdiViH~AA~v~---f~----~~~~~~~~~Nv~gt~~ll~la~~~----~~ 153 (570)
+++.+|++ +.+...+++.. +|-.+|.||..- |. +.++..+++|+.+..++.++..+. ..
T Consensus 56 ~Pi~~Dls-------~wea~~~~l~~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~ 128 (245)
T KOG1207|consen 56 IPIVGDLS-------AWEALFKLLVPVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQI 128 (245)
T ss_pred eeeEeccc-------HHHHHHHhhcccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccC
Confidence 99999999 55544455443 799999998642 32 445666789999998888774431 11
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
-..+|.+||..+.-.- +-...|..
T Consensus 129 ~GaIVNvSSqas~R~~--------------------------------------------------------~nHtvYca 152 (245)
T KOG1207|consen 129 KGAIVNVSSQASIRPL--------------------------------------------------------DNHTVYCA 152 (245)
T ss_pred CceEEEecchhccccc--------------------------------------------------------CCceEEee
Confidence 2358889986543211 22467999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHH
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+.-+.+.+.. ..++++..+.|+.|...... ..|.|.-.. +..+..++ .--|.-||.|
T Consensus 153 tKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~--dnWSDP~K~---------k~mL~riP-----l~rFaEV~eV 216 (245)
T KOG1207|consen 153 TKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGR--DNWSDPDKK---------KKMLDRIP-----LKRFAEVDEV 216 (245)
T ss_pred cHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccc--cccCCchhc---------cchhhhCc-----hhhhhHHHHH
Confidence 999888877654 34689999999999876542 345543111 01111111 1235678999
Q ss_pred HHHHHHHHHHh
Q 008324 309 VNAMIVAMVAH 319 (570)
Q Consensus 309 a~aii~a~~~~ 319 (570)
+||+...+.+.
T Consensus 217 VnA~lfLLSd~ 227 (245)
T KOG1207|consen 217 VNAVLFLLSDN 227 (245)
T ss_pred HhhheeeeecC
Confidence 99998877543
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=98.87 E-value=5.6e-08 Score=99.72 Aligned_cols=241 Identities=12% Similarity=0.088 Sum_probs=135.1
Q ss_pred cCCCEEEEECC--cchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 10 LENKTILVSGV--TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGa--TGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||+++|||| +.-||.++++.|.+.| .+|++ .|.... .+++.+++-. .-++.++..... ...+..
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~G---a~Vv~-~~~~~~---l~~~~~~~~~-~~~~~~~~~~~~----~~~~~~ 74 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAG---AEILV-GTWVPA---LNIFETSLRR-GKFDESRKLPDG----SLMEIT 74 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCC---CEEEE-EeCcch---hhHHHHhhhc-cccchhhhcccc----cccCcC
Confidence 78999999999 7889999999999999 56666 554322 2222211111 001111111000 001124
Q ss_pred EEEeccC--CCCC-CCC----------CchhhHHHH-------hCCccEEEEcCccC-----Cc----cccHHHHHHHhH
Q 008324 88 TFVPGDI--SSED-LGL----------KDSNLKEEL-------WNELDIMVNSAAIT-----KF----DERYDVAFGINT 138 (570)
Q Consensus 88 ~~v~gDl--~~~~-lgl----------s~~~~~~~l-------~~~vdiViH~AA~v-----~f----~~~~~~~~~~Nv 138 (570)
..+.+|+ ++++ +-- ++.+..+.+ +..+|++||+||.. .+ .+.++..+++|+
T Consensus 75 ~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~ 154 (303)
T PLN02730 75 KVYPLDAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASS 154 (303)
T ss_pred eeeecceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHh
Confidence 5678888 4332 000 011112222 23589999999642 12 245777899999
Q ss_pred HHHHHHHHHHHH-ccCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhc
Q 008324 139 LGVIHLVNFAKK-CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNL 217 (570)
Q Consensus 139 ~gt~~ll~la~~-~~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (570)
.|+..+.+.+.. |..-.++|.+||........
T Consensus 155 ~~~~~l~~~~~p~m~~~G~II~isS~a~~~~~p----------------------------------------------- 187 (303)
T PLN02730 155 YSFVSLLQHFGPIMNPGGASISLTYIASERIIP----------------------------------------------- 187 (303)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEechhhcCCCC-----------------------------------------------
Confidence 999999887765 32225799998864321100
Q ss_pred cccccccCCCCchHHHHHHHHHHHHHHh----c--cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCcee
Q 008324 218 GTERAKLHGWPNTYVFTKTMGEMLMQQS----K--ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRC 291 (570)
Q Consensus 218 g~~~~~~~~~~n~Y~~sK~~aE~lv~~~----~--~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~ 291 (570)
.+...|+.||+..+.+.+.. . .++.+..|-||.|-.+.....+ +.+ ..........
T Consensus 188 --------~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~-~~~------~~~~~~~~~~--- 249 (303)
T PLN02730 188 --------GYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIG-FID------DMIEYSYANA--- 249 (303)
T ss_pred --------CCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhccc-ccH------HHHHHHHhcC---
Confidence 11136999999999887654 2 4799999999988775432111 000 1111111100
Q ss_pred eecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 292 LVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 292 ~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+ ...+...++++++++.++..... .-.++++.+.++
T Consensus 250 ----p--l~r~~~peevA~~~~fLaS~~a~-~itG~~l~vdGG 285 (303)
T PLN02730 250 ----P--LQKELTADEVGNAAAFLASPLAS-AITGATIYVDNG 285 (303)
T ss_pred ----C--CCCCcCHHHHHHHHHHHhCcccc-CccCCEEEECCC
Confidence 1 01234568999999888753222 122566766554
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=98.86 E-value=5.8e-08 Score=96.27 Aligned_cols=211 Identities=18% Similarity=0.208 Sum_probs=136.7
Q ss_pred CCc--chhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccCCC
Q 008324 19 GVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISS 96 (570)
Q Consensus 19 GaT--GFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl~~ 96 (570)
|++ +-||.+++++|++.| .+|++..|+.... .+. .+.+.++.+ ..++.+|+++
T Consensus 1 g~~~s~GiG~aia~~l~~~G---a~V~~~~~~~~~~--~~~----------~~~l~~~~~----------~~~~~~D~~~ 55 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEG---ANVILTDRNEEKL--ADA----------LEELAKEYG----------AEVIQCDLSD 55 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTT---EEEEEEESSHHHH--HHH----------HHHHHHHTT----------SEEEESCTTS
T ss_pred CCCCCCChHHHHHHHHHHCC---CEEEEEeCChHHH--HHH----------HHHHHHHcC----------CceEeecCcc
Confidence 666 999999999999999 7889999976532 111 122233322 2259999995
Q ss_pred CCCCCCchhhHHHH-------h-CCccEEEEcCccCCc-----------cccHHHHHHHhHHHHHHHHHHHHH-ccCceE
Q 008324 97 EDLGLKDSNLKEEL-------W-NELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAKK-CVKLKV 156 (570)
Q Consensus 97 ~~lgls~~~~~~~l-------~-~~vdiViH~AA~v~f-----------~~~~~~~~~~Nv~gt~~ll~la~~-~~~l~~ 156 (570)
+ +..+.+ . ..+|+++|+|+.... .+.++..+++|+.++..+++.+.+ ++.-.+
T Consensus 56 ~-------~~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs 128 (241)
T PF13561_consen 56 E-------ESVEALFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGS 128 (241)
T ss_dssp H-------HHHHHHHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEE
T ss_pred h-------HHHHHHHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 3 333333 4 678999999987543 134677789999999999988865 334468
Q ss_pred EEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHH
Q 008324 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (570)
Q Consensus 157 ~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+|++||....... +....|+.+|+
T Consensus 129 ii~iss~~~~~~~--------------------------------------------------------~~~~~y~~sKa 152 (241)
T PF13561_consen 129 IINISSIAAQRPM--------------------------------------------------------PGYSAYSASKA 152 (241)
T ss_dssp EEEEEEGGGTSBS--------------------------------------------------------TTTHHHHHHHH
T ss_pred cccccchhhcccC--------------------------------------------------------ccchhhHHHHH
Confidence 9999887432211 12347999999
Q ss_pred HHHHHHHHh-----c-cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHH
Q 008324 237 MGEMLMQQS-----K-ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (570)
Q Consensus 237 ~aE~lv~~~-----~-~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ 310 (570)
..+.+++.. . .++++..|.||.|..+..+. ......+....... .+ ...+...+|||+
T Consensus 153 al~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~-------~~~~~~~~~~~~~~----~p-----l~r~~~~~evA~ 216 (241)
T PF13561_consen 153 ALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTER-------IPGNEEFLEELKKR----IP-----LGRLGTPEEVAN 216 (241)
T ss_dssp HHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHH-------HHTHHHHHHHHHHH----ST-----TSSHBEHHHHHH
T ss_pred HHHHHHHHHHHHhccccCeeeeeecccceeccchhc-------cccccchhhhhhhh----hc-----cCCCcCHHHHHH
Confidence 999998765 4 68999999999887643211 11111122211111 11 112357899999
Q ss_pred HHHHHHHHhhCCCCCCceEEecCC
Q 008324 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++.++.+.+.- -.|++..+.+|
T Consensus 217 ~v~fL~s~~a~~-itG~~i~vDGG 239 (241)
T PF13561_consen 217 AVLFLASDAASY-ITGQVIPVDGG 239 (241)
T ss_dssp HHHHHHSGGGTT-GTSEEEEESTT
T ss_pred HHHHHhCccccC-ccCCeEEECCC
Confidence 999888644322 23677777665
|
... |
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.4e-08 Score=94.81 Aligned_cols=222 Identities=19% Similarity=0.275 Sum_probs=135.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+.||++++|||.|-||..+.+.|+..+ ++.+.++-|-++ .+. +-.|++.+| ..++.+
T Consensus 3 ~tGKna~vtggagGIGl~~sk~Ll~kg--ik~~~i~~~~En-~~a-------------~akL~ai~p-------~~~v~F 59 (261)
T KOG4169|consen 3 LTGKNALVTGGAGGIGLATSKALLEKG--IKVLVIDDSEEN-PEA-------------IAKLQAINP-------SVSVIF 59 (261)
T ss_pred ccCceEEEecCCchhhHHHHHHHHHcC--chheeehhhhhC-HHH-------------HHHHhccCC-------CceEEE
Confidence 469999999999999999999999987 344444444333 222 234444444 378999
Q ss_pred EeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCccccHHHHHHHhHHHHHHH----HHHHHHccC--ceE
Q 008324 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKFDERYDVAFGINTLGVIHL----VNFAKKCVK--LKV 156 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~l----l~la~~~~~--l~~ 156 (570)
+.+|+++. .+ .+.. +..+|++||.|+... +.+++..+.+|..|.-+- |....+-.+ -.-
T Consensus 60 ~~~DVt~~------~~-~~~~f~ki~~~fg~iDIlINgAGi~~-dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGi 131 (261)
T KOG4169|consen 60 IKCDVTNR------GD-LEAAFDKILATFGTIDILINGAGILD-DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGI 131 (261)
T ss_pred EEeccccH------HH-HHHHHHHHHHHhCceEEEEccccccc-chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcE
Confidence 99999952 22 2222 245899999999854 566888899998775554 444443221 224
Q ss_pred EEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHH
Q 008324 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (570)
Q Consensus 157 ~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+|-+||++ |..+ .+ ....|+.||+
T Consensus 132 IvNmsSv~--GL~P-----------~p-------------------------------------------~~pVY~AsKa 155 (261)
T KOG4169|consen 132 IVNMSSVA--GLDP-----------MP-------------------------------------------VFPVYAASKA 155 (261)
T ss_pred EEEecccc--ccCc-----------cc-------------------------------------------cchhhhhccc
Confidence 66677654 3211 01 1124666655
Q ss_pred --------HHHHHHHHhccCCcEEEEecCceecCCCCCC---CccccCccchHHHHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 237 --------MGEMLMQQSKENLSLVIIRPTVVSGTYKEPF---PGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 237 --------~aE~lv~~~~~~lp~~IvRPsiV~g~~~ep~---~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
+|...-.+ +.|+.+..+.|+.+-...-+.+ .+|.+--......+..+. --+-
T Consensus 156 GVvgFTRSla~~ayy~-~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~----------------~q~~ 218 (261)
T KOG4169|consen 156 GVVGFTRSLADLAYYQ-RSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAP----------------KQSP 218 (261)
T ss_pred ceeeeehhhhhhhhHh-hcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcc----------------cCCH
Confidence 44333221 4689999999998866544433 344442222222221111 2345
Q ss_pred HHHHHHHHHHHHHhhCCCCCCceEEecCCCCCcc
Q 008324 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPV 339 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~~~~pi 339 (570)
..+++.++.+++.. .++.+|-+.++..+++
T Consensus 219 ~~~a~~~v~aiE~~----~NGaiw~v~~g~l~~~ 248 (261)
T KOG4169|consen 219 ACCAINIVNAIEYP----KNGAIWKVDSGSLEPV 248 (261)
T ss_pred HHHHHHHHHHHhhc----cCCcEEEEecCcEEEe
Confidence 67899999998752 2478999988844443
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.2e-07 Score=87.74 Aligned_cols=231 Identities=18% Similarity=0.215 Sum_probs=144.4
Q ss_pred cHHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccC
Q 008324 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 5 ~i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
...+....|...||||+.-||+++...|.+.| .+|.+..+.........+ +| |. .
T Consensus 7 ~~~~r~~sk~~~vtGg~sGIGrAia~~la~~G---arv~v~dl~~~~A~ata~---~L-------------~g------~ 61 (256)
T KOG1200|consen 7 EVVQRLMSKVAAVTGGSSGIGRAIAQLLAKKG---ARVAVADLDSAAAEATAG---DL-------------GG------Y 61 (256)
T ss_pred HHHHHHhcceeEEecCCchHHHHHHHHHHhcC---cEEEEeecchhhHHHHHh---hc-------------CC------C
Confidence 35667788999999999999999999999999 566666665543322222 11 10 1
Q ss_pred CceEEEeccCCCCCCCCCchhh-HHHH---hCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc--
Q 008324 85 EKITFVPGDISSEDLGLKDSNL-KEEL---WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-- 151 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgls~~~~-~~~l---~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~-- 151 (570)
..-..+.+|++++. +.+. +++. +..++++++||++.+. .+.|+..+.+|..|+..+.+++-+.
T Consensus 62 ~~h~aF~~DVS~a~----~v~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~ 137 (256)
T KOG1200|consen 62 GDHSAFSCDVSKAH----DVQNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMV 137 (256)
T ss_pred CccceeeeccCcHH----HHHHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHH
Confidence 24456899999643 2111 1222 2358999999999863 4778999999999999998887653
Q ss_pred -cCc--eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 008324 152 -VKL--KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (570)
Q Consensus 152 -~~l--~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
.+- -++|-+||.- |. .|.+-...|.. .-.
T Consensus 138 ~~~~~~~sIiNvsSIV--Gk-iGN~GQtnYAA---------------------------------------------sK~ 169 (256)
T KOG1200|consen 138 MNQQQGLSIINVSSIV--GK-IGNFGQTNYAA---------------------------------------------SKG 169 (256)
T ss_pred HhcCCCceEEeehhhh--cc-cccccchhhhh---------------------------------------------hcC
Confidence 122 2799999862 21 11111111210 001
Q ss_pred chHHHHHHHHHHHHHHhccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHH
Q 008324 229 NTYVFTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (570)
Q Consensus 229 n~Y~~sK~~aE~lv~~~~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
-.-+|||.+|..+.+ .++++..+-|+.|-.|..+.+|. .++..+..+++..-+| ..+++
T Consensus 170 GvIgftktaArEla~---knIrvN~VlPGFI~tpMT~~mp~---------~v~~ki~~~iPmgr~G---------~~Eev 228 (256)
T KOG1200|consen 170 GVIGFTKTAARELAR---KNIRVNVVLPGFIATPMTEAMPP---------KVLDKILGMIPMGRLG---------EAEEV 228 (256)
T ss_pred ceeeeeHHHHHHHhh---cCceEeEeccccccChhhhhcCH---------HHHHHHHccCCccccC---------CHHHH
Confidence 234567777776654 58999999999999987764432 3344444444333333 35789
Q ss_pred HHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+.++.++.+.. .--.+..+.++++
T Consensus 229 A~~V~fLAS~~s-sYiTG~t~evtGG 253 (256)
T KOG1200|consen 229 ANLVLFLASDAS-SYITGTTLEVTGG 253 (256)
T ss_pred HHHHHHHhcccc-ccccceeEEEecc
Confidence 999988874222 1112445555554
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=98.72 E-value=3.6e-07 Score=115.37 Aligned_cols=180 Identities=12% Similarity=0.134 Sum_probs=116.2
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcc--------cHHHHHHHHHhh----------------
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID--------SAALRFQNEVLA---------------- 64 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~--------~~~~rl~~~l~~---------------- 64 (570)
+-+|++++||||+|.||..++++|++++. .+|+++.|+.... .....++..+++
T Consensus 1994 l~~g~vvLVTGGarGIG~aiA~~LA~~~g--a~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~ 2071 (2582)
T TIGR02813 1994 LNSDDVFLVTGGAKGVTFECALELAKQCQ--AHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDA 2071 (2582)
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHhcC--CEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhh
Confidence 45689999999999999999999998742 5788899983110 000111100000
Q ss_pred --------hhhHHHHHhhhccccccccCCceEEEeccCCCCCCCCCchhhHHHHhC------CccEEEEcCccCCc----
Q 008324 65 --------KDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWN------ELDIMVNSAAITKF---- 126 (570)
Q Consensus 65 --------~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~------~vdiViH~AA~v~f---- 126 (570)
..+-..+..- .....++.++.+|+++ .+..+.+++ .+|+|||+||....
T Consensus 2072 ~~~~~~~~~ei~~~la~l------~~~G~~v~y~~~DVtD-------~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~ 2138 (2582)
T TIGR02813 2072 LVRPVLSSLEIAQALAAF------KAAGASAEYASADVTN-------SVSVAATVQPLNKTLQITGIIHGAGVLADKHIQ 2138 (2582)
T ss_pred cccccchhHHHHHHHHHH------HhcCCcEEEEEccCCC-------HHHHHHHHHHHHHhCCCcEEEECCccCCCCCcc
Confidence 0000001000 0013568899999995 333333322 48999999997532
Q ss_pred ---cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceee-cCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhh
Q 008324 127 ---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA-GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKT 202 (570)
Q Consensus 127 ---~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~-~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~ 202 (570)
.+.++..+++|+.|+.++++.+... .++++|.+||.... |+.
T Consensus 2139 ~~t~e~f~~v~~~nv~G~~~Ll~al~~~-~~~~IV~~SSvag~~G~~--------------------------------- 2184 (2582)
T TIGR02813 2139 DKTLEEFNAVYGTKVDGLLSLLAALNAE-NIKLLALFSSAAGFYGNT--------------------------------- 2184 (2582)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEechhhcCCCC---------------------------------
Confidence 2457778999999999999998764 56789999987543 321
Q ss_pred cCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh---ccCCcEEEEecCceec
Q 008324 203 KGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS---KENLSLVIIRPTVVSG 261 (570)
Q Consensus 203 ~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~---~~~lp~~IvRPsiV~g 261 (570)
....|+.+|...+.+.... ..+.++..+.||.+-+
T Consensus 2185 ------------------------gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdt 2222 (2582)
T TIGR02813 2185 ------------------------GQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDG 2222 (2582)
T ss_pred ------------------------CcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecC
Confidence 1245999998877776554 2357788888877654
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.1e-07 Score=94.35 Aligned_cols=164 Identities=13% Similarity=0.066 Sum_probs=102.2
Q ss_pred HHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccCCCCCCCCCchhhH
Q 008324 28 FIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLK 107 (570)
Q Consensus 28 LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~ 107 (570)
++++|++.| .+|+++.|+..... ...++.+|+++ .+..
T Consensus 1 ~a~~l~~~G---~~Vv~~~r~~~~~~--------------------------------~~~~~~~Dl~~-------~~~v 38 (241)
T PRK12428 1 TARLLRFLG---ARVIGVDRREPGMT--------------------------------LDGFIQADLGD-------PASI 38 (241)
T ss_pred ChHHHHhCC---CEEEEEeCCcchhh--------------------------------hhHhhcccCCC-------HHHH
Confidence 467888888 67888888754310 01246789984 3333
Q ss_pred HHHhC----CccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHH-ccCceEEEEEecceeecCCCc-ccccccCCCC
Q 008324 108 EELWN----ELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKK-CVKLKVFVHVSTAYVAGERTG-LILENPLDGA 181 (570)
Q Consensus 108 ~~l~~----~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~-~~~l~~~V~vSTa~v~~~~~g-~i~E~~~~~~ 181 (570)
+.+++ ++|+|||+||... .++++..+++|+.|+..+++++.. +..-.++|++||...++.... ...|....
T Consensus 39 ~~~~~~~~~~iD~li~nAG~~~-~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~-- 115 (241)
T PRK12428 39 DAAVAALPGRIDALFNIAGVPG-TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAA-- 115 (241)
T ss_pred HHHHHHhcCCCeEEEECCCCCC-CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhc--
Confidence 44443 5899999999754 356788899999999999999875 323368999999877653110 00000000
Q ss_pred CCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh------ccCCcEEEEe
Q 008324 182 SGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS------KENLSLVIIR 255 (570)
Q Consensus 182 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~------~~~lp~~IvR 255 (570)
..+.+ +. +. ............|+.||+..+.+.+.. ..++.+.+++
T Consensus 116 -~~~~~--------------------~~----~~---~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~ 167 (241)
T PRK12428 116 -TASFD--------------------EG----AA---WLAAHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVA 167 (241)
T ss_pred -cchHH--------------------HH----HH---hhhccCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEee
Confidence 00000 00 00 000000123368999999998877543 2479999999
Q ss_pred cCceecCCC
Q 008324 256 PTVVSGTYK 264 (570)
Q Consensus 256 PsiV~g~~~ 264 (570)
||.|.++..
T Consensus 168 PG~v~T~~~ 176 (241)
T PRK12428 168 PGPVFTPIL 176 (241)
T ss_pred cCCccCccc
Confidence 999988643
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.69 E-value=2.9e-07 Score=87.20 Aligned_cols=157 Identities=16% Similarity=0.129 Sum_probs=101.6
Q ss_pred HhHHHHHHHHHHHHHccCc-eEEEEEecceeecCCCcccccccCCCCCCC-ChHHHHHHHHHHHHhhhhcCCChhHHHHH
Q 008324 136 INTLGVIHLVNFAKKCVKL-KVFVHVSTAYVAGERTGLILENPLDGASGL-DFDAEMKVIDQKLNELKTKGAPQKEITLF 213 (570)
Q Consensus 136 ~Nv~gt~~ll~la~~~~~l-~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (570)
..+..|..+.++....+.. +.+|.+|...+|-... ...|+++.+. +.+-...++
T Consensus 103 SRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~----s~eY~e~~~~qgfd~~srL~-------------------- 158 (315)
T KOG3019|consen 103 SRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSE----SQEYSEKIVHQGFDILSRLC-------------------- 158 (315)
T ss_pred ceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEecccc----ccccccccccCChHHHHHHH--------------------
Confidence 3444578888888887654 4899999888876532 1233322221 111111111
Q ss_pred HhhccccccccCCCCchHHHHHHHHHHHHHHhccCCcEEEEecCceecCCCCCCCccccCccchHHHH--HHHhcCCcee
Q 008324 214 MKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLF--VASAQGNLRC 291 (570)
Q Consensus 214 ~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i--~~~~~G~~~~ 291 (570)
+|+++ .......+.+++++|.+.|.|.... .+..++ ..++.|.
T Consensus 159 --------------------l~WE~--aA~~~~~~~r~~~iR~GvVlG~gGG----------a~~~M~lpF~~g~GG--- 203 (315)
T KOG3019|consen 159 --------------------LEWEG--AALKANKDVRVALIRIGVVLGKGGG----------ALAMMILPFQMGAGG--- 203 (315)
T ss_pred --------------------HHHHH--HhhccCcceeEEEEEEeEEEecCCc----------chhhhhhhhhhccCC---
Confidence 23322 2222245689999999999996541 111112 2334443
Q ss_pred eecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccCCC
Q 008324 292 LVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPW 357 (570)
Q Consensus 292 ~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p~ 357 (570)
-.|++++...+||+||+++.+-.+++... -..|.|-+.+ ++.+..|+++.+...+++..+
T Consensus 204 PlGsG~Q~fpWIHv~DL~~li~~ale~~~----v~GViNgvAP--~~~~n~Ef~q~lg~aL~Rp~~ 263 (315)
T KOG3019|consen 204 PLGSGQQWFPWIHVDDLVNLIYEALENPS----VKGVINGVAP--NPVRNGEFCQQLGSALSRPSW 263 (315)
T ss_pred cCCCCCeeeeeeehHHHHHHHHHHHhcCC----CCceecccCC--CccchHHHHHHHHHHhCCCcc
Confidence 35889999999999999999999987322 2468999988 999999999999998887543
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.67 E-value=3.6e-07 Score=91.29 Aligned_cols=165 Identities=19% Similarity=0.249 Sum_probs=111.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
..+|.|||||+-.-.|..|+.+|.+.| ..|++-.-.+.+........ ..++..-
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~G---f~V~Agcl~~~gae~L~~~~-----------------------~s~rl~t 80 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKG---FRVFAGCLTEEGAESLRGET-----------------------KSPRLRT 80 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcC---CEEEEEeecCchHHHHhhhh-----------------------cCCccee
Confidence 567889999999999999999999999 67787775444432222111 0367778
Q ss_pred EeccCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHH----HHHHccCce
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVN----FAKKCVKLK 155 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f--------~~~~~~~~~~Nv~gt~~ll~----la~~~~~l~ 155 (570)
+..|+++|+.-.......+..++ +.=.|||+||...+ .+.++..+++|..|+.++.. +.++.+ .
T Consensus 81 ~~LDVT~~esi~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar--G 158 (322)
T KOG1610|consen 81 LQLDVTKPESVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR--G 158 (322)
T ss_pred EeeccCCHHHHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc--C
Confidence 89999975432222222222222 25689999996532 24577789999999877744 445533 4
Q ss_pred EEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHH
Q 008324 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (570)
Q Consensus 156 ~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
|+|.+||.. | +-. . +.-.+|..||
T Consensus 159 RvVnvsS~~--G-R~~------~-----------------------------------------------p~~g~Y~~SK 182 (322)
T KOG1610|consen 159 RVVNVSSVL--G-RVA------L-----------------------------------------------PALGPYCVSK 182 (322)
T ss_pred eEEEecccc--c-Ccc------C-----------------------------------------------cccccchhhH
Confidence 899999863 2 210 0 1235699999
Q ss_pred HHHHHHHHHh-----ccCCcEEEEecCc
Q 008324 236 TMGEMLMQQS-----KENLSLVIIRPTV 258 (570)
Q Consensus 236 ~~aE~lv~~~-----~~~lp~~IvRPsi 258 (570)
+..|...... ..|+.+.|+-||.
T Consensus 183 ~aVeaf~D~lR~EL~~fGV~VsiiePG~ 210 (322)
T KOG1610|consen 183 FAVEAFSDSLRRELRPFGVKVSIIEPGF 210 (322)
T ss_pred HHHHHHHHHHHHHHHhcCcEEEEeccCc
Confidence 9999986543 4589999999993
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.67 E-value=4.1e-07 Score=85.21 Aligned_cols=127 Identities=19% Similarity=0.268 Sum_probs=84.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+.|-+||||||+..||..|++++++.| .+|++..|+. +||.+ .+.+ .+.+.-
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~elg---N~VIi~gR~e------~~L~e----------~~~~---------~p~~~t 54 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLELG---NTVIICGRNE------ERLAE----------AKAE---------NPEIHT 54 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHHHhC---CEEEEecCcH------HHHHH----------HHhc---------Ccchhe
Confidence 357899999999999999999999999 6778877764 34431 1111 245667
Q ss_pred EeccCCCCCCCCCchhhHHHHhC---CccEEEEcCccCC---cc------ccHHHHHHHhHHHHHHHHHHHHHc--cC-c
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN---ELDIMVNSAAITK---FD------ERYDVAFGINTLGVIHLVNFAKKC--VK-L 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~---~vdiViH~AA~v~---f~------~~~~~~~~~Nv~gt~~ll~la~~~--~~-l 154 (570)
+.+|+.+.+. -.+..+.+.+ .+|++||+||..+ |. +..+.-+.+|..++.+|..+...+ ++ -
T Consensus 55 ~v~Dv~d~~~---~~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~ 131 (245)
T COG3967 55 EVCDVADRDS---RRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPE 131 (245)
T ss_pred eeecccchhh---HHHHHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCC
Confidence 8899984210 1112233333 4899999999864 22 123445789999999987766543 12 3
Q ss_pred eEEEEEecceeec
Q 008324 155 KVFVHVSTAYVAG 167 (570)
Q Consensus 155 ~~~V~vSTa~v~~ 167 (570)
..+|-|||.-.+-
T Consensus 132 a~IInVSSGLafv 144 (245)
T COG3967 132 ATIINVSSGLAFV 144 (245)
T ss_pred ceEEEeccccccC
Confidence 4688899865443
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=4.2e-07 Score=93.18 Aligned_cols=151 Identities=11% Similarity=0.056 Sum_probs=89.7
Q ss_pred CCccEEEEcCccC-----Cc----cccHHHHHHHhHHHHHHHHHHHHH-ccCceEEEEEecceeecCCCcccccccCCCC
Q 008324 112 NELDIMVNSAAIT-----KF----DERYDVAFGINTLGVIHLVNFAKK-CVKLKVFVHVSTAYVAGERTGLILENPLDGA 181 (570)
Q Consensus 112 ~~vdiViH~AA~v-----~f----~~~~~~~~~~Nv~gt~~ll~la~~-~~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~ 181 (570)
..+|++||+||.. .+ .+.++..+++|+.|+.++.+++.. +..-.++|.+||........
T Consensus 118 G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~~G~ii~iss~~~~~~~p----------- 186 (299)
T PRK06300 118 GHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPGGSTISLTYLASMRAVP----------- 186 (299)
T ss_pred CCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCeEEEEeehhhcCcCC-----------
Confidence 4599999999753 12 135677789999999999988875 33334688887653221100
Q ss_pred CCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-----c-cCCcEEEEe
Q 008324 182 SGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-----K-ENLSLVIIR 255 (570)
Q Consensus 182 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~-~~lp~~IvR 255 (570)
.....|+.||+..+.+.+.. . .++.+..|.
T Consensus 187 --------------------------------------------~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~ 222 (299)
T PRK06300 187 --------------------------------------------GYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTIS 222 (299)
T ss_pred --------------------------------------------CccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEE
Confidence 11126999999998887644 2 379999999
Q ss_pred cCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 256 PTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 256 PsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+.|-.+..+... ........... . .+ .......+++++++...+..... .-.++++.+.++
T Consensus 223 PG~v~T~~~~~~~-------~~~~~~~~~~~-~---~p-----~~r~~~peevA~~v~~L~s~~~~-~itG~~i~vdGG 284 (299)
T PRK06300 223 AGPLASRAGKAIG-------FIERMVDYYQD-W---AP-----LPEPMEAEQVGAAAAFLVSPLAS-AITGETLYVDHG 284 (299)
T ss_pred eCCccChhhhccc-------ccHHHHHHHHh-c---CC-----CCCCcCHHHHHHHHHHHhCcccc-CCCCCEEEECCC
Confidence 9988765321110 00011000000 0 00 11234679999998887753222 122567766554
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.62 E-value=4.2e-06 Score=77.28 Aligned_cols=108 Identities=15% Similarity=0.149 Sum_probs=78.6
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|.|.||||-+|+.++++.+++| +.|.+++|++..... .+.+.+++.
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RG---HeVTAivRn~~K~~~-----------------------------~~~~~i~q~ 48 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRG---HEVTAIVRNASKLAA-----------------------------RQGVTILQK 48 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCC---CeeEEEEeChHhccc-----------------------------cccceeecc
Confidence 689999999999999999999999 677999998754321 256778999
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEeccee
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v 165 (570)
|+.++ +.....+.+.|+||..-+...- ++... -......+++..+.. ++.|++.|+.+.+
T Consensus 49 Difd~-------~~~a~~l~g~DaVIsA~~~~~~-~~~~~----~~k~~~~li~~l~~a-gv~RllVVGGAGS 108 (211)
T COG2910 49 DIFDL-------TSLASDLAGHDAVISAFGAGAS-DNDEL----HSKSIEALIEALKGA-GVPRLLVVGGAGS 108 (211)
T ss_pred cccCh-------hhhHhhhcCCceEEEeccCCCC-ChhHH----HHHHHHHHHHHHhhc-CCeeEEEEcCccc
Confidence 99953 3334677899999976443211 22221 222366778888876 8899999887754
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.58 E-value=8.6e-07 Score=84.42 Aligned_cols=116 Identities=14% Similarity=0.227 Sum_probs=74.1
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
..++||||||+-.||--|+++|+. .+++..+....|+.... .+.++. . ....++++++
T Consensus 2 spksv~ItGaNRGIGlgLVk~llk-~~~i~~iiat~r~~e~a--~~~l~~-k------------------~~~d~rvHii 59 (249)
T KOG1611|consen 2 SPKSVFITGANRGIGLGLVKELLK-DKGIEVIIATARDPEKA--ATELAL-K------------------SKSDSRVHII 59 (249)
T ss_pred CCccEEEeccCcchhHHHHHHHhc-CCCcEEEEEecCChHHh--hHHHHH-h------------------hccCCceEEE
Confidence 346799999999999999999996 45676666666755433 222221 0 1124789999
Q ss_pred eccCCCCCCCCCchhhHHHH--hCCccEEEEcCccCC-c-------cccHHHHHHHhHHHHHHHHHHH
Q 008324 91 PGDISSEDLGLKDSNLKEEL--WNELDIMVNSAAITK-F-------DERYDVAFGINTLGVIHLVNFA 148 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l--~~~vdiViH~AA~v~-f-------~~~~~~~~~~Nv~gt~~ll~la 148 (570)
+.|++..+.--...+..+.+ .++.|++|++||... + .+.+-..+++|+.|+..+.+..
T Consensus 60 ~Ldvt~deS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~ 127 (249)
T KOG1611|consen 60 QLDVTCDESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAF 127 (249)
T ss_pred EEecccHHHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHH
Confidence 99999632111111111222 235799999999752 2 1235566899999987775543
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.1e-06 Score=82.73 Aligned_cols=164 Identities=15% Similarity=0.169 Sum_probs=110.4
Q ss_pred CCCEEEEEC-CcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 11 ENKTILVSG-VTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 11 ~~k~VlITG-aTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+.|.|+||| ++|.||.+|+.++.+.| ..||+..|+...-+ .|. +..++.+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G---~~V~AtaR~~e~M~---~L~-----------------------~~~gl~~ 56 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNG---YLVYATARRLEPMA---QLA-----------------------IQFGLKP 56 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCC---eEEEEEccccchHh---hHH-----------------------HhhCCee
Confidence 457899998 56999999999999999 78899988754321 111 0245778
Q ss_pred EeccCCCCCCCCCchhhHHHHhC----CccEEEEcCccCC-c------cccHHHHHHHhHHHHHHHHHHHHHc--cCceE
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN----ELDIMVNSAAITK-F------DERYDVAFGINTLGVIHLVNFAKKC--VKLKV 156 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~----~vdiViH~AA~v~-f------~~~~~~~~~~Nv~gt~~ll~la~~~--~~l~~ 156 (570)
...|+++|+-... ...++.. ..|+.+|.||..- | .+..+..+++|+.|..++.++...+ +.-..
T Consensus 57 ~kLDV~~~~~V~~---v~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGt 133 (289)
T KOG1209|consen 57 YKLDVSKPEEVVT---VSGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGT 133 (289)
T ss_pred EEeccCChHHHHH---HHHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccce
Confidence 9999997542110 1112222 4799999998642 2 2345677899999988887766543 23346
Q ss_pred EEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHH
Q 008324 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (570)
Q Consensus 157 ~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+|.+.|..++-. ++|...|+.||+
T Consensus 134 IVnvgSl~~~vp--------------------------------------------------------fpf~~iYsAsKA 157 (289)
T KOG1209|consen 134 IVNVGSLAGVVP--------------------------------------------------------FPFGSIYSASKA 157 (289)
T ss_pred EEEecceeEEec--------------------------------------------------------cchhhhhhHHHH
Confidence 889988765542 145678999999
Q ss_pred HHHHHHHHh-----ccCCcEEEEecCceecC
Q 008324 237 MGEMLMQQS-----KENLSLVIIRPTVVSGT 262 (570)
Q Consensus 237 ~aE~lv~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
....+.+.. ..+++++-+-||.|-..
T Consensus 158 Aihay~~tLrlEl~PFgv~Vin~itGGv~T~ 188 (289)
T KOG1209|consen 158 AIHAYARTLRLELKPFGVRVINAITGGVATD 188 (289)
T ss_pred HHHHhhhhcEEeeeccccEEEEecccceecc
Confidence 988887654 23566666666665443
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.49 E-value=3.5e-06 Score=84.19 Aligned_cols=123 Identities=17% Similarity=0.226 Sum_probs=86.3
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|+||||+.-+|+.++..+.++| ..|.++.|+++......+.-+ + .+ ...+|.+..+
T Consensus 34 ~hi~itggS~glgl~la~e~~~~g---a~Vti~ar~~~kl~~a~~~l~-l--------~~----------~~~~v~~~S~ 91 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREG---ADVTITARSGKKLLEAKAELE-L--------LT----------QVEDVSYKSV 91 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHcc---CceEEEeccHHHHHHHHhhhh-h--------hh----------ccceeeEecc
Confidence 489999999999999999999999 567889998876544333110 0 00 1234778999
Q ss_pred cCCCCCCCCCchhhHHHHhC-------CccEEEEcCccC---Ccc----ccHHHHHHHhHHHHHHHHHHHHH-ccCce--
Q 008324 93 DISSEDLGLKDSNLKEELWN-------ELDIMVNSAAIT---KFD----ERYDVAFGINTLGVIHLVNFAKK-CVKLK-- 155 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v---~f~----~~~~~~~~~Nv~gt~~ll~la~~-~~~l~-- 155 (570)
|+. +-+..+..++ .+|.+|||||.. -|. +..+...++|..|+.+++.++.. |+..+
T Consensus 92 d~~-------~Y~~v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~ 164 (331)
T KOG1210|consen 92 DVI-------DYDSVSKVIEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHL 164 (331)
T ss_pred ccc-------cHHHHHHHHhhhhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccC
Confidence 996 4444444433 479999999964 132 33566789999999999887653 44333
Q ss_pred -EEEEEecce
Q 008324 156 -VFVHVSTAY 164 (570)
Q Consensus 156 -~~V~vSTa~ 164 (570)
+++.+||..
T Consensus 165 g~I~~vsS~~ 174 (331)
T KOG1210|consen 165 GRIILVSSQL 174 (331)
T ss_pred cEEEEehhhh
Confidence 788888754
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=4.2e-06 Score=78.50 Aligned_cols=85 Identities=14% Similarity=0.172 Sum_probs=58.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|.||..++..|++.| .+|++..|+.... +....+ +++ . ..++.+
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~G---~~V~l~~r~~~~~---~~~~~~---------l~~-~--------~~~~~~ 69 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQG---AKVIVTDIDQESG---QATVEE---------ITN-L--------GGEALF 69 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHH---------HHh-c--------CCcEEE
Confidence 689999999999999999999999988 6778887764321 111111 111 0 245667
Q ss_pred EeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCC
Q 008324 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITK 125 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~ 125 (570)
+.+|++++ +..+.+ +.++|++||+||...
T Consensus 70 ~~~Dl~~~-------~~v~~~v~~~~~~~G~iDilVnnAG~~~ 105 (169)
T PRK06720 70 VSYDMEKQ-------GDWQRVISITLNAFSRIDMLFQNAGLYK 105 (169)
T ss_pred EEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence 89999853 222222 246999999999753
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.14 E-value=1e-05 Score=76.40 Aligned_cols=101 Identities=17% Similarity=0.098 Sum_probs=68.1
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+++|||||||+|. ++++|++.| .+|.++.|++.. .+.+. ...+. ..++.++.+
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G---~~V~v~~R~~~~---~~~l~-------------~~l~~------~~~i~~~~~ 54 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKG---FHVSVIARREVK---LENVK-------------RESTT------PESITPLPL 54 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCc---CEEEEEECCHHH---HHHHH-------------HHhhc------CCcEEEEEc
Confidence 57999999999886 999999998 577788886422 11111 00110 256788999
Q ss_pred cCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCce----EEEEEe
Q 008324 93 DISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLK----VFVHVS 161 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~----~~V~vS 161 (570)
|+++ .+....+++ .+|++|+.+ .+.++.++.++|++. +++ +|+|+=
T Consensus 55 Dv~d-------~~sv~~~i~~~l~~~g~id~lv~~v---------------h~~~~~~~~~~~~~~-gv~~~~~~~~h~~ 111 (177)
T PRK08309 55 DYHD-------DDALKLAIKSTIEKNGPFDLAVAWI---------------HSSAKDALSVVCREL-DGSSETYRLFHVL 111 (177)
T ss_pred cCCC-------HHHHHHHHHHHHHHcCCCeEEEEec---------------cccchhhHHHHHHHH-ccCCCCceEEEEe
Confidence 9995 333334332 356666543 344788999999997 888 899975
Q ss_pred c
Q 008324 162 T 162 (570)
Q Consensus 162 T 162 (570)
.
T Consensus 112 g 112 (177)
T PRK08309 112 G 112 (177)
T ss_pred C
Confidence 3
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.12 E-value=4.6e-06 Score=81.92 Aligned_cols=84 Identities=11% Similarity=0.173 Sum_probs=53.5
Q ss_pred cCCCEEEEECCc----------------chhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHh
Q 008324 10 LENKTILVSGVT----------------GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKE 73 (570)
Q Consensus 10 ~~~k~VlITGaT----------------GFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~ 73 (570)
++||+||||+|. ||+|.+|++.|++.| .+|+++.+.-..... .
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~G---a~V~li~g~~~~~~~--~---------------- 59 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKG---AHVIYLHGYFAEKPN--D---------------- 59 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCC---CeEEEEeCCCcCCCc--c----------------
Confidence 479999999875 999999999999999 456666553221100 0
Q ss_pred hhccccccccCCceEEEeccCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCccc
Q 008324 74 KWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFDE 128 (570)
Q Consensus 74 ~~~~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~~ 128 (570)
.+ . ..++..+.+|.. ..+....+++ ++|+|||+||...|..
T Consensus 60 -~~----~--~~~~~~V~s~~d-------~~~~l~~~~~~~~~D~VIH~AAvsD~~~ 102 (229)
T PRK09620 60 -IN----N--QLELHPFEGIID-------LQDKMKSIITHEKVDAVIMAAAGSDWVV 102 (229)
T ss_pred -cC----C--ceeEEEEecHHH-------HHHHHHHHhcccCCCEEEECccccceec
Confidence 00 0 123445666333 1223345553 5899999999977753
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=2.9e-05 Score=80.04 Aligned_cols=125 Identities=17% Similarity=0.116 Sum_probs=86.0
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
-.+.++|.||||+|.||..++..|...+ ...++.++.+.+....+. ++.. . ...
T Consensus 5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~-~~~elvL~Di~~~~g~a~-----Dl~~-----------------~-~~~-- 58 (321)
T PTZ00325 5 ALKMFKVAVLGAAGGIGQPLSLLLKQNP-HVSELSLYDIVGAPGVAA-----DLSH-----------------I-DTP-- 58 (321)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHhcCC-CCCEEEEEecCCCccccc-----chhh-----------------c-CcC--
Confidence 3567799999999999999999887543 336778887733211111 1100 0 011
Q ss_pred EEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeec
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~ 167 (570)
....+.+++ .+. .+.++++|+|+++||..+- ..+....+..|+.+++++++.+++. +++++|.++|..+..
T Consensus 59 ~~v~~~td~------~~~-~~~l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~-~~~~iviv~SNPvdv 130 (321)
T PTZ00325 59 AKVTGYADG------ELW-EKALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASS-APKAIVGIVSNPVNS 130 (321)
T ss_pred ceEEEecCC------Cch-HHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecCcHHH
Confidence 122344421 221 2567899999999998653 3556778999999999999999997 999999999976554
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.10 E-value=3.8e-05 Score=76.96 Aligned_cols=171 Identities=15% Similarity=0.171 Sum_probs=111.7
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
|+-..|||||.-|||..+++|.++| -+|+++.|++.+ .+++.+||.+. ..-++..+.
T Consensus 49 g~WAVVTGaTDGIGKayA~eLAkrG---~nvvLIsRt~~K---L~~v~kEI~~~-----------------~~vev~~i~ 105 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAYARELAKRG---FNVVLISRTQEK---LEAVAKEIEEK-----------------YKVEVRIIA 105 (312)
T ss_pred CCEEEEECCCCcchHHHHHHHHHcC---CEEEEEeCCHHH---HHHHHHHHHHH-----------------hCcEEEEEE
Confidence 4779999999999999999999999 568999998754 33444344221 023577899
Q ss_pred ccCCCCCCCCCchhhHHHHhCC--ccEEEEcCccCC-----ccc----cHHHHHHHhHHHHHHHHHHHHH-c--cCceEE
Q 008324 92 GDISSEDLGLKDSNLKEELWNE--LDIMVNSAAITK-----FDE----RYDVAFGINTLGVIHLVNFAKK-C--VKLKVF 157 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~--vdiViH~AA~v~-----f~~----~~~~~~~~Nv~gt~~ll~la~~-~--~~l~~~ 157 (570)
.|.++++- +-+..++.+.+ +.++||++|... |.+ .+...+.+|+.++..+.+.... | ++-..+
T Consensus 106 ~Dft~~~~---~ye~i~~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~I 182 (312)
T KOG1014|consen 106 IDFTKGDE---VYEKLLEKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGII 182 (312)
T ss_pred EecCCCch---hHHHHHHHhcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceE
Confidence 99997642 12222333343 678999999754 211 2344567899998888776543 2 133457
Q ss_pred EEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHH
Q 008324 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (570)
Q Consensus 158 V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~ 237 (570)
|.+||...-- + . +.-..|..||+.
T Consensus 183 vnigS~ag~~--p-------~-----------------------------------------------p~~s~ysasK~~ 206 (312)
T KOG1014|consen 183 VNIGSFAGLI--P-------T-----------------------------------------------PLLSVYSASKAF 206 (312)
T ss_pred EEeccccccc--c-------C-----------------------------------------------hhHHHHHHHHHH
Confidence 8888763211 0 0 112579999986
Q ss_pred HHHHHH----Hh-ccCCcEEEEecCceecCCC
Q 008324 238 GEMLMQ----QS-KENLSLVIIRPTVVSGTYK 264 (570)
Q Consensus 238 aE~lv~----~~-~~~lp~~IvRPsiV~g~~~ 264 (570)
.+.+-. ++ ..++-+-.+-|..|.+...
T Consensus 207 v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~ 238 (312)
T KOG1014|consen 207 VDFFSRCLQKEYESKGIFVQSVIPYLVATKMA 238 (312)
T ss_pred HHHHHHHHHHHHHhcCeEEEEeehhheecccc
Confidence 655543 33 4588888888988887644
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.10 E-value=2.6e-06 Score=77.49 Aligned_cols=127 Identities=23% Similarity=0.361 Sum_probs=87.4
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
...+|-..+||||..-+|+.-+|+|...| ..|.++.-+..+.....+ + ...++
T Consensus 5 rs~kglvalvtggasglg~ataerlakqg---asv~lldlp~skg~~vak---e---------------------lg~~~ 57 (260)
T KOG1199|consen 5 RSTKGLVALVTGGASGLGKATAERLAKQG---ASVALLDLPQSKGADVAK---E---------------------LGGKV 57 (260)
T ss_pred hhhcCeeEEeecCcccccHHHHHHHHhcC---ceEEEEeCCcccchHHHH---H---------------------hCCce
Confidence 34578889999999999999999999999 556666655433221111 1 14789
Q ss_pred EEEeccCCCCCCCCCchhhHHHH------hCCccEEEEcCccC------Ccc-------ccHHHHHHHhHHHHHHHHHHH
Q 008324 88 TFVPGDISSEDLGLKDSNLKEEL------WNELDIMVNSAAIT------KFD-------ERYDVAFGINTLGVIHLVNFA 148 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l------~~~vdiViH~AA~v------~f~-------~~~~~~~~~Nv~gt~~ll~la 148 (570)
.+...|++++ .|....+ +.++|+.+|||++. ++. |.+...+++|+.||.|++++.
T Consensus 58 vf~padvtse------kdv~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~ 131 (260)
T KOG1199|consen 58 VFTPADVTSE------KDVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLG 131 (260)
T ss_pred EEeccccCcH------HHHHHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeeh
Confidence 9999999953 3332222 24589999999974 111 445566789999999998876
Q ss_pred HH-c------cCceEEEEEecceeec
Q 008324 149 KK-C------VKLKVFVHVSTAYVAG 167 (570)
Q Consensus 149 ~~-~------~~l~~~V~vSTa~v~~ 167 (570)
.. | .+-+|-|.+.|+.|..
T Consensus 132 aglmg~nepdq~gqrgviintasvaa 157 (260)
T KOG1199|consen 132 AGLMGENEPDQNGQRGVIINTASVAA 157 (260)
T ss_pred hhhhcCCCCCCCCcceEEEeeceeee
Confidence 43 3 1345667777776654
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.08 E-value=3.7e-05 Score=79.37 Aligned_cols=120 Identities=19% Similarity=0.136 Sum_probs=82.3
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.++|.||||+|.||..++..|+..+ -...+.++.+.+...... +|... .... ..
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~-~~~el~L~Di~~~~g~a~-----Dl~~~------------------~~~~--~i 71 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNP-LVSELHLYDIANTPGVAA-----DVSHI------------------NTPA--QV 71 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-CCCEEEEEecCCCCeeEc-----hhhhC------------------CcCc--eE
Confidence 3689999999999999999887643 346778887755111110 11000 0111 11
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEeccee
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v 165 (570)
.+++. +.+. .+.++++|+|||+||..+- ..+....+..|+..++++.+.+++. +.+++|.++|-=+
T Consensus 72 ~~~~~------~~d~-~~~l~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~-~p~aivivvSNPv 138 (323)
T PLN00106 72 RGFLG------DDQL-GDALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKH-CPNALVNIISNPV 138 (323)
T ss_pred EEEeC------CCCH-HHHcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCCCc
Confidence 23221 2333 3677899999999998654 4567788999999999999999997 7889999887533
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.02 E-value=5.8e-05 Score=78.30 Aligned_cols=109 Identities=14% Similarity=0.128 Sum_probs=69.2
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCC----CccEEEEEEcCCCcc-cHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQP----NVKKLYLFVRAADID-SAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~----~V~~V~~lvR~~~~~-~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.+|+||||+|++|.+++..|+..+- .-..|.++.|++... ...+.+ ++. +-.
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~--Dl~---------------------d~~ 59 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVM--ELQ---------------------DCA 59 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceee--ehh---------------------hcc
Confidence 4799999999999999999987431 113788888855311 000000 000 000
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
.+..+|+.. ..+ ..+.++++|+|||+||..+. .++....++.|+.-.+.+....++.
T Consensus 60 ~~~~~~~~~------~~~-~~~~l~~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~ 117 (325)
T cd01336 60 FPLLKSVVA------TTD-PEEAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKY 117 (325)
T ss_pred ccccCCcee------cCC-HHHHhCCCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 011223321 122 23566899999999998754 3445677999999999998888776
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.88 E-value=7.8e-05 Score=71.34 Aligned_cols=165 Identities=19% Similarity=0.209 Sum_probs=104.5
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.++.+|+||++--||.-++..++..+.+. .++...|+... .+.+.+.
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~-~r~g~~r~~a~--------------------------------~~~L~v~ 51 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEA-LRYGVARLLAE--------------------------------LEGLKVA 51 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHH-HHHhhhccccc--------------------------------ccceEEE
Confidence 46789999999999999888888776432 22222222211 1334444
Q ss_pred eccCCCCCCCCC-chhhHHHHhC-------CccEEEEcCccCC-----c-----cccHHHHHHHhHHHHHHHHHHHHH-c
Q 008324 91 PGDISSEDLGLK-DSNLKEELWN-------ELDIMVNSAAITK-----F-----DERYDVAFGINTLGVIHLVNFAKK-C 151 (570)
Q Consensus 91 ~gDl~~~~lgls-~~~~~~~l~~-------~vdiViH~AA~v~-----f-----~~~~~~~~~~Nv~gt~~ll~la~~-~ 151 (570)
.||.....-|.- ....+..+.+ +-|+|||.||... + .+.|+..+++|+.+...+...+.. .
T Consensus 52 ~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~l 131 (253)
T KOG1204|consen 52 YGDDFVHVVGDITEEQLLGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKL 131 (253)
T ss_pred ecCCcceechHHHHHHHHHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHh
Confidence 444332222211 2222222221 4799999999753 2 245788899999999998877654 2
Q ss_pred cCc---eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 008324 152 VKL---KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (570)
Q Consensus 152 ~~l---~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
++. +-+|.|||..+.-. |+ . -
T Consensus 132 k~~p~~~~vVnvSS~aav~p---------~~----------------------------------------------~-w 155 (253)
T KOG1204|consen 132 KKSPVNGNVVNVSSLAAVRP---------FS----------------------------------------------S-W 155 (253)
T ss_pred cCCCccCeEEEecchhhhcc---------cc----------------------------------------------H-H
Confidence 332 56889998754422 11 1 1
Q ss_pred chHHHHHHHHHHHHHHh---c-cCCcEEEEecCceecCCC
Q 008324 229 NTYVFTKTMGEMLMQQS---K-ENLSLVIIRPTVVSGTYK 264 (570)
Q Consensus 229 n~Y~~sK~~aE~lv~~~---~-~~lp~~IvRPsiV~g~~~ 264 (570)
..|..+|+.-+++.+.. . .++.+..++||+|-...+
T Consensus 156 a~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq 195 (253)
T KOG1204|consen 156 AAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQ 195 (253)
T ss_pred HHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhH
Confidence 46999999999988754 3 378899999999876543
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.0001 Score=72.59 Aligned_cols=98 Identities=14% Similarity=0.169 Sum_probs=57.4
Q ss_pred EEE-CCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccC
Q 008324 16 LVS-GVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (570)
Q Consensus 16 lIT-GaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl 94 (570)
+|| .+|||+|.+|++.|++.| .+|.++.|+..... ....++.++..+-
T Consensus 19 ~itN~SSG~iG~aLA~~L~~~G---~~V~li~r~~~~~~----------------------------~~~~~v~~i~v~s 67 (229)
T PRK06732 19 GITNHSTGQLGKIIAETFLAAG---HEVTLVTTKTAVKP----------------------------EPHPNLSIIEIEN 67 (229)
T ss_pred eecCccchHHHHHHHHHHHhCC---CEEEEEECcccccC----------------------------CCCCCeEEEEEec
Confidence 344 369999999999999999 67788777532100 0013455555432
Q ss_pred CCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHH
Q 008324 95 SSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKK 150 (570)
Q Consensus 95 ~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~ 150 (570)
.+. ..+.....++++|+|||+||...|.. ....-..+...+.++.+++++
T Consensus 68 ~~~-----m~~~l~~~~~~~DivIh~AAvsd~~~-~~~~~~~~~~~~~~v~~~~~~ 117 (229)
T PRK06732 68 VDD-----LLETLEPLVKDHDVLIHSMAVSDYTP-VYMTDLEEVSASDNLNEFLTK 117 (229)
T ss_pred HHH-----HHHHHHHHhcCCCEEEeCCccCCcee-hhhhhhhhhhhhhhhhhhhcc
Confidence 210 11223345678999999999876532 222223345555566666654
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=9.7e-05 Score=76.48 Aligned_cols=40 Identities=25% Similarity=0.264 Sum_probs=33.6
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
.++|++|+||||||+||+.++++|+..+ .+.+++++.|+.
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~-gv~~lilv~R~~ 191 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKT-GVAELLLVARQQ 191 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhC-CCCEEEEEcCCH
Confidence 5789999999999999999999998642 347888888863
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0012 Score=69.21 Aligned_cols=100 Identities=14% Similarity=0.074 Sum_probs=53.4
Q ss_pred CCCEEEEECCcchhHHH--HHHHHHHhCCCccEEEEEEcCCCcccHHHHHH-HHHhhhhhHHHHHhhhccccccccCCce
Q 008324 11 ENKTILVSGVTGFVAKV--FIEKILRVQPNVKKLYLFVRAADIDSAALRFQ-NEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~--LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~-~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.||++|||||++-+|.+ +++.| +.| ..|+++.+.+.... .+.- .-..+...+....++. ...+
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~G---A~Vi~v~~~~~~~~--~~~~tagwy~~~a~~~~a~~~--------G~~a 105 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAG---ADTLGVFFEKPGTE--KKTGTAGWYNSAAFDKFAKAA--------GLYA 105 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcC---CeEEEEecCcchhh--hcccccccchHHHHHHHHHhc--------CCce
Confidence 36899999999999999 89999 888 55666665331111 0000 0000000111111111 1345
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccC
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAIT 124 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v 124 (570)
..+.+|+++++---.-.+...+.+.++|+++|++|..
T Consensus 106 ~~i~~DVss~E~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 106 KSINGDAFSDEIKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred EEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 6789999964210000011111124699999999976
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0008 Score=69.45 Aligned_cols=117 Identities=17% Similarity=0.153 Sum_probs=76.7
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+|.||||.+|++++..|.........+.++.|++. .... .+ ++. + .+....+.+
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~-al--Dl~-----------~--------~~~~~~i~~ 57 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGV-AV--DLS-----------H--------IPTAVKIKG 57 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-Ccce-eh--hhh-----------c--------CCCCceEEE
Confidence 68999999999999999988654444456777777643 1110 00 110 0 011112233
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEec
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vST 162 (570)
.. ..+. ...++++|+||.+||..+- .++....+..|+..++++++..++. +.+++|.+.|
T Consensus 58 -~~-------~~d~-~~~l~~~DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~-~~~~ivivvs 118 (312)
T PRK05086 58 -FS-------GEDP-TPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKT-CPKACIGIIT 118 (312)
T ss_pred -eC-------CCCH-HHHcCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEcc
Confidence 11 1222 2455789999999998643 3345567899999999999999997 8888888876
|
|
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0025 Score=62.03 Aligned_cols=136 Identities=19% Similarity=0.196 Sum_probs=85.8
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCC--ccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPN--VKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~--V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
-|.++|||++.-+|-.|+.+|++...+ +-++.+..|+-...+. +-.+|+.-+|.. .-.+++
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~------------vc~~lk~f~p~~-----~i~~~y 65 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEA------------VCAALKAFHPKS-----TIEVTY 65 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHH------------HHHHHHHhCCCc-----eeEEEE
Confidence 367999999999999999999997644 3356666676543321 122344444421 246788
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc----------------------------------cccHHHHHH
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF----------------------------------DERYDVAFG 135 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f----------------------------------~~~~~~~~~ 135 (570)
+..|+++-...+........-++..|.|+-.||...+ .+.+...++
T Consensus 66 vlvD~sNm~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFe 145 (341)
T KOG1478|consen 66 VLVDVSNMQSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFE 145 (341)
T ss_pred EEEehhhHHHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhh
Confidence 9999985322221111122334568999999987532 244566788
Q ss_pred HhHHHHHHHHHHHHHc---cCceEEEEEecce
Q 008324 136 INTLGVIHLVNFAKKC---VKLKVFVHVSTAY 164 (570)
Q Consensus 136 ~Nv~gt~~ll~la~~~---~~l~~~V~vSTa~ 164 (570)
+||-|..-+++..... ..-..+|.+||..
T Consensus 146 tnVFGhfyli~~l~pll~~~~~~~lvwtSS~~ 177 (341)
T KOG1478|consen 146 TNVFGHFYLIRELEPLLCHSDNPQLVWTSSRM 177 (341)
T ss_pred hcccchhhhHhhhhhHhhcCCCCeEEEEeecc
Confidence 9999988876654432 1223788998864
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00045 Score=72.50 Aligned_cols=90 Identities=22% Similarity=0.266 Sum_probs=69.0
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|+|.|| |++|+.++.+|++++. .+|++..|++.+.. ++. .. ..++++....
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d--~~V~iAdRs~~~~~---~i~-------------~~--------~~~~v~~~~v 54 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGD--GEVTIADRSKEKCA---RIA-------------EL--------IGGKVEALQV 54 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCC--ceEEEEeCCHHHHH---HHH-------------hh--------ccccceeEEe
Confidence 68999998 9999999999999874 78999999875432 211 11 1358999999
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
|+. +.+.+.+++++.|+|||++... . +..++++|.+.
T Consensus 55 D~~-------d~~al~~li~~~d~VIn~~p~~-----~----------~~~i~ka~i~~ 91 (389)
T COG1748 55 DAA-------DVDALVALIKDFDLVINAAPPF-----V----------DLTILKACIKT 91 (389)
T ss_pred ccc-------ChHHHHHHHhcCCEEEEeCCch-----h----------hHHHHHHHHHh
Confidence 999 5555668889999999998651 1 12678888886
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.00099 Score=63.83 Aligned_cols=82 Identities=21% Similarity=0.184 Sum_probs=53.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++++|+||||.+|+.+++.|++.+ .+|+++.|+... .+.+. +.+.+. .+...
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g---~~V~l~~R~~~~---~~~l~---------~~l~~~----------~~~~~ 80 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREG---ARVVLVGRDLER---AQKAA---------DSLRAR----------FGEGV 80 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEcCCHHH---HHHHH---------HHHHhh----------cCCcE
Confidence 578999999999999999999999877 578888886321 11111 111111 12234
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCcc
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAI 123 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~ 123 (570)
...|.. +.+.....+.++|+||++.+.
T Consensus 81 ~~~~~~-------~~~~~~~~~~~~diVi~at~~ 107 (194)
T cd01078 81 GAVETS-------DDAARAAAIKGADVVFAAGAA 107 (194)
T ss_pred EEeeCC-------CHHHHHHHHhcCCEEEECCCC
Confidence 445655 333334677889999997654
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.00089 Score=71.24 Aligned_cols=37 Identities=16% Similarity=0.223 Sum_probs=32.8
Q ss_pred cCCCEEEEECC----------------cchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGV----------------TGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGa----------------TGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
++||+|+|||| ||.+|.++++.|.+.| .+|+++.++.
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~G---a~V~~v~~~~ 238 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRG---ADVTLVSGPV 238 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCC---CEEEEeCCCc
Confidence 68999999999 9999999999999999 6677777654
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0054 Score=63.60 Aligned_cols=103 Identities=15% Similarity=0.130 Sum_probs=67.4
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCcc-----EEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVK-----KLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~-----~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+|.||||+|.+|..++..|+..+ -+. .+.++.+.+.. ++..
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~-~~~~~~~~~l~L~Di~~~~---------------------------------~~~~ 47 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGE-LFGDDQPVILHLLDIPPAM---------------------------------KALE 47 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCC-ccCCCCceEEEEEecCCcc---------------------------------Cccc
Confidence 79999999999999999888643 222 47777665421 1112
Q ss_pred EEeccCCCCCCCC-C----chhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 89 FVPGDISSEDLGL-K----DSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 89 ~v~gDl~~~~lgl-s----~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
....|+.+....+ . ..+ ..+.++++|+|+|+||..+- .++....+..|+.-.+++....++.
T Consensus 48 g~~~Dl~d~~~~~~~~~~i~~~-~~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~ 115 (323)
T cd00704 48 GVVMELQDCAFPLLKGVVITTD-PEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKV 115 (323)
T ss_pred eeeeehhhhcccccCCcEEecC-hHHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHh
Confidence 2233333321000 0 011 13567899999999998643 3455667899999999999888886
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0042 Score=64.39 Aligned_cols=175 Identities=14% Similarity=0.044 Sum_probs=103.0
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCC----CccEEEEEEcCCCc--ccHHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQP----NVKKLYLFVRAADI--DSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~----~V~~V~~lvR~~~~--~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
.++|.|+||+|.+|..++-.|+..+- +...+.++...+.. .... .+ ++..... .+ ..
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~-a~--Dl~~~~~-------------~~-~~ 64 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGV-AM--ELEDCAF-------------PL-LA 64 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCccccccee-eh--hhhhccc-------------cc-cC
Confidence 46899999999999999999986542 22267777774322 1111 10 1111000 00 11
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecce
Q 008324 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~ 164 (570)
++.+. + .+ .+.++++|+||.+|+..+- .++....+..|+.-.+.+....++......++.+-|-
T Consensus 65 ~~~i~-~-----------~~--~~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsN- 129 (322)
T cd01338 65 EIVIT-D-----------DP--NVAFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGN- 129 (322)
T ss_pred ceEEe-c-----------Cc--HHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecC-
Confidence 22221 1 11 1445889999999998643 3445567899999999999988886322344333321
Q ss_pred eecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhcc-ccccccCCCCchHHHHHHHHHHHHH
Q 008324 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLG-TERAKLHGWPNTYVFTKTMGEMLMQ 243 (570)
Q Consensus 165 v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~n~Y~~sK~~aE~lv~ 243 (570)
|+|.-.- . ..+..| + +..+.|+.|+...+++..
T Consensus 130 ------------------PvD~~t~--~--------------------~~k~sg~~------p~~~ViG~t~LDs~Rl~~ 163 (322)
T cd01338 130 ------------------PCNTNAL--I--------------------AMKNAPDI------PPDNFTAMTRLDHNRAKS 163 (322)
T ss_pred ------------------cHHHHHH--H--------------------HHHHcCCC------ChHheEEehHHHHHHHHH
Confidence 1221110 0 011111 1 234568888988888876
Q ss_pred Hh--ccCCcEEEEecCceecCCC
Q 008324 244 QS--KENLSLVIIRPTVVSGTYK 264 (570)
Q Consensus 244 ~~--~~~lp~~IvRPsiV~g~~~ 264 (570)
.. ..+++...+|..+|+|+..
T Consensus 164 ~la~~lgv~~~~v~~~~V~GeHG 186 (322)
T cd01338 164 QLAKKAGVPVTDVKNMVIWGNHS 186 (322)
T ss_pred HHHHHhCcChhHeEEEEEEeCCc
Confidence 55 4578889999989888764
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0054 Score=63.61 Aligned_cols=112 Identities=14% Similarity=0.104 Sum_probs=71.4
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCcc-----EEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVK-----KLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~-----~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+|.|+||+|.+|..++..|...+- +. .++++.+.+.. ++..
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~-~~~~~e~el~LiD~~~~~---------------------------------~~a~ 46 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRM-LGKDQPIILHLLDIPPAM---------------------------------KVLE 46 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccc-cCCCCccEEEEEecCCcc---------------------------------cccc
Confidence 589999999999999999886431 11 47777765432 1122
Q ss_pred EEeccCCCCCCCC-C----chhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEE
Q 008324 89 FVPGDISSEDLGL-K----DSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 89 ~v~gDl~~~~lgl-s----~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~v 160 (570)
....|+.+....+ . ..+. ...++++|+|||+||..+- .++....+..|+.-.+.+.....+..+...++.+
T Consensus 47 g~~~Dl~d~~~~~~~~~~~~~~~-~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiiv 123 (324)
T TIGR01758 47 GVVMELMDCAFPLLDGVVPTHDP-AVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLV 123 (324)
T ss_pred eeEeehhcccchhcCceeccCCh-HHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEE
Confidence 2333333322000 0 0121 2566899999999998654 3446778999999999999988886223344443
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0011 Score=58.47 Aligned_cols=40 Identities=15% Similarity=0.356 Sum_probs=33.3
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC-CcccH
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA-DIDSA 54 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~-~~~~~ 54 (570)
+|.|.||||++|+.|++.|++ .|.+..+.+..|+. .++..
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~-hp~~e~~~~~~~~~~~g~~~ 41 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAE-HPDFELVALVSSSRSAGKPL 41 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHH-TSTEEEEEEEESTTTTTSBH
T ss_pred CEEEECCCCHHHHHHHHHHhc-CCCccEEEeeeeccccCCee
Confidence 689999999999999999988 68887788888877 55443
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0031 Score=63.00 Aligned_cols=92 Identities=14% Similarity=0.155 Sum_probs=61.1
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||+||||. |+.|++.|.+.| ++|++.+|+..+...... .....+.+
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g---~~v~~s~~t~~~~~~~~~---------------------------~g~~~v~~ 49 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQG---IEILVTVTTSEGKHLYPI---------------------------HQALTVHT 49 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCC---CeEEEEEccCCccccccc---------------------------cCCceEEE
Confidence 58999999999 999999999988 678899998765422110 11223334
Q ss_pred cCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCce
Q 008324 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLK 155 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~ 155 (570)
+..+ ..+.. .++. ++|+||+.+.. |.. .-+.++.++|+++ ++.
T Consensus 50 g~l~------~~~l~-~~l~~~~i~~VIDAtHP--fA~----------~is~~a~~a~~~~-~ip 94 (256)
T TIGR00715 50 GALD------PQELR-EFLKRHSIDILVDATHP--FAA----------QITTNATAVCKEL-GIP 94 (256)
T ss_pred CCCC------HHHHH-HHHHhcCCCEEEEcCCH--HHH----------HHHHHHHHHHHHh-CCc
Confidence 4332 44433 4443 49999998754 211 3467788899987 554
|
This enzyme was found to be a monomer by gel filtration. |
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0026 Score=60.36 Aligned_cols=78 Identities=18% Similarity=0.296 Sum_probs=47.8
Q ss_pred cCCCEEEEECC----------------cchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHh
Q 008324 10 LENKTILVSGV----------------TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKE 73 (570)
Q Consensus 10 ~~~k~VlITGa----------------TGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~ 73 (570)
++||+||||+| ||-+|.+|++.+++.| ..|.++..+.. ..
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~G---a~V~li~g~~~-~~-------------------- 56 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRG---AEVTLIHGPSS-LP-------------------- 56 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT----EEEEEE-TTS-----------------------
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCC---CEEEEEecCcc-cc--------------------
Confidence 47999999975 7999999999999999 56676666531 10
Q ss_pred hhccccccccCCceEEEeccCCCCCCCCCchhhH---HHHhCCccEEEEcCccCCccc
Q 008324 74 KWGTRLNSFISEKITFVPGDISSEDLGLKDSNLK---EELWNELDIMVNSAAITKFDE 128 (570)
Q Consensus 74 ~~~~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~---~~l~~~vdiViH~AA~v~f~~ 128 (570)
....+..+...-. .+.. ...+++.|++||+||...|..
T Consensus 57 ---------~p~~~~~i~v~sa--------~em~~~~~~~~~~~Di~I~aAAVsDf~p 97 (185)
T PF04127_consen 57 ---------PPPGVKVIRVESA--------EEMLEAVKELLPSADIIIMAAAVSDFRP 97 (185)
T ss_dssp -----------TTEEEEE-SSH--------HHHHHHHHHHGGGGSEEEE-SB--SEEE
T ss_pred ---------ccccceEEEecch--------hhhhhhhccccCcceeEEEecchhheee
Confidence 0146666665533 3332 234466899999999988754
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0022 Score=68.34 Aligned_cols=90 Identities=23% Similarity=0.319 Sum_probs=60.5
Q ss_pred EEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccC
Q 008324 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (570)
Q Consensus 15 VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl 94 (570)
|+|.|| |++|+.+++.|+++.+ +.+|.+..|+.... +++. ++. ...++..+..|+
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~-~~~v~va~r~~~~~---~~~~-------------~~~-------~~~~~~~~~~d~ 55 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGP-FEEVTVADRNPEKA---ERLA-------------EKL-------LGDRVEAVQVDV 55 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTC-E-EEEEEESSHHHH---HHHH-------------T---------TTTTEEEEE--T
T ss_pred CEEEcC-cHHHHHHHHHHhcCCC-CCcEEEEECCHHHH---HHHH-------------hhc-------cccceeEEEEec
Confidence 789999 9999999999998763 33888888876432 1111 000 137899999999
Q ss_pred CCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 95 SSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 95 ~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
. +.+.+..++++.|+||||++.. + ...++++|.+.
T Consensus 56 ~-------~~~~l~~~~~~~dvVin~~gp~-~--------------~~~v~~~~i~~ 90 (386)
T PF03435_consen 56 N-------DPESLAELLRGCDVVINCAGPF-F--------------GEPVARACIEA 90 (386)
T ss_dssp T-------THHHHHHHHTTSSEEEE-SSGG-G--------------HHHHHHHHHHH
T ss_pred C-------CHHHHHHHHhcCCEEEECCccc-h--------------hHHHHHHHHHh
Confidence 9 4454678899999999999873 1 22577788876
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.028 Score=50.93 Aligned_cols=114 Identities=14% Similarity=0.118 Sum_probs=73.9
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|+||+|.+|++++-.|+..+ -+.+++++.+.+...... ..|+-....+ ...++....+
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~-l~~ei~L~D~~~~~~~g~---a~Dl~~~~~~--------------~~~~~~i~~~ 62 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQG-LADEIVLIDINEDKAEGE---ALDLSHASAP--------------LPSPVRITSG 62 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTT-TSSEEEEEESSHHHHHHH---HHHHHHHHHG--------------STEEEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHhCC-CCCceEEeccCcccceee---ehhhhhhhhh--------------cccccccccc
Confidence 589999999999999999998864 557888888875422111 1122211111 0122333332
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
| . +.++++|+|+-+|+..+- .++-.+.++.|+.-.+++.+...+. +.+.++.
T Consensus 63 ~----------~----~~~~~aDivvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~-~p~~~vi 115 (141)
T PF00056_consen 63 D----------Y----EALKDADIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKY-APDAIVI 115 (141)
T ss_dssp S----------G----GGGTTESEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHH-STTSEEE
T ss_pred c----------c----cccccccEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHh-CCccEEE
Confidence 2 1 334789999999997542 3455667899999999999988886 3443433
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.007 Score=61.83 Aligned_cols=86 Identities=19% Similarity=0.201 Sum_probs=54.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.+||+++|||| |.+|++++..|.+.|. .+|+++.|+....+..+.+.++ +.+. ..++..
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~--~~V~I~~R~~~~~~~a~~l~~~---------l~~~---------~~~~~~ 182 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGA--KEITIFNIKDDFYERAEQTAEK---------IKQE---------VPECIV 182 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEeCCchHHHHHHHHHHH---------Hhhc---------CCCcee
Confidence 46899999998 7899999999998873 5689999975321122222211 1111 123344
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCcc
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAI 123 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~ 123 (570)
...|++ +.+.....++.+|+|||+-..
T Consensus 183 ~~~d~~-------~~~~~~~~~~~~DilINaTp~ 209 (289)
T PRK12548 183 NVYDLN-------DTEKLKAEIASSDILVNATLV 209 (289)
T ss_pred EEechh-------hhhHHHhhhccCCEEEEeCCC
Confidence 556766 333334566778999997543
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.05 Score=52.57 Aligned_cols=110 Identities=22% Similarity=0.315 Sum_probs=64.0
Q ss_pred hcCCCEEEEECCc--chhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 9 FLENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 9 ~~~~k~VlITGaT--GFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
+++||++||+|-. --|+..+++.|.+.|.++ ......+ ...+|++ ++ .++. ..
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL---~fTy~~e---~l~krv~-~l---------a~~~---------~s 57 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAEL---AFTYQGE---RLEKRVE-EL---------AEEL---------GS 57 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCCEE---EEEeccH---HHHHHHH-HH---------Hhhc---------cC
Confidence 6889999999953 458999999999999543 3333322 1222322 11 1111 22
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCC-------cc----ccHHHHHHHhHHHHHHHHHHH
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK-------FD----ERYDVAFGINTLGVIHLVNFA 148 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~-------f~----~~~~~~~~~Nv~gt~~ll~la 148 (570)
-.++++|+++ ++..+.++ ...|.++|+-|... |- +.+..+.++-+..--.+.+.|
T Consensus 58 ~~v~~cDV~~-------d~~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a 130 (259)
T COG0623 58 DLVLPCDVTN-------DESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAA 130 (259)
T ss_pred CeEEecCCCC-------HHHHHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHH
Confidence 3468999995 33333443 35899999998754 21 223334445444555555555
Q ss_pred HH
Q 008324 149 KK 150 (570)
Q Consensus 149 ~~ 150 (570)
+.
T Consensus 131 ~~ 132 (259)
T COG0623 131 RP 132 (259)
T ss_pred HH
Confidence 54
|
|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0052 Score=62.67 Aligned_cols=89 Identities=22% Similarity=0.395 Sum_probs=59.6
Q ss_pred EEEEECCcchhHHHHHHHHHHhC--CCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQ--PNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~--~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.+.|.|||||-|+.++|.++++. ++ ..+.+..|+.+ +|++ . .+.+-+..+.+ ....+ ++.
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~-~slavAGRn~~------KL~~-v-----L~~~~~k~~~~----ls~~~-i~i 68 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEG-LSLAVAGRNEK------KLQE-V-----LEKVGEKTGTD----LSSSV-ILI 68 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccC-ceEEEecCCHH------HHHH-H-----HHHHhhccCCC----cccce-EEE
Confidence 58999999999999999999832 22 34555666643 2321 1 11122222222 12334 888
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD 127 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~ 127 (570)
+|.. +++.+.++++...+|+||+|+.+|.
T Consensus 69 ~D~~-------n~~Sl~emak~~~vivN~vGPyR~h 97 (423)
T KOG2733|consen 69 ADSA-------NEASLDEMAKQARVIVNCVGPYRFH 97 (423)
T ss_pred ecCC-------CHHHHHHHHhhhEEEEeccccceec
Confidence 9999 5666678999999999999998774
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.068 Score=55.82 Aligned_cols=129 Identities=19% Similarity=0.197 Sum_probs=78.2
Q ss_pred HHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHH----hh-hhhHHHHHhhhc
Q 008324 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEV----LA-KDVFNVLKEKWG 76 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l----~~-~~~f~~l~~~~~ 76 (570)
-++-+++++|+|.|+ |-+|..+++.|.+.| |.++.++.+..-..+-..|-. +++ .+ ...-+++++.+|
T Consensus 18 ~Q~~L~~~~VlIiG~-GglGs~va~~La~aG--vg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp 94 (338)
T PRK12475 18 GQRKIREKHVLIVGA-GALGAANAEALVRAG--IGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINS 94 (338)
T ss_pred HHHhhcCCcEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCC
Confidence 467788999999996 559999999999987 578888877652222111210 000 00 001134444443
Q ss_pred cccccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceE
Q 008324 77 TRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKV 156 (570)
Q Consensus 77 ~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~ 156 (570)
.-+++.+..|++ .+. .+.+++++|+||.+... .+.-+ .+-++|.+. + ..
T Consensus 95 -------~v~i~~~~~~~~-------~~~-~~~~~~~~DlVid~~D~------~~~r~--------~in~~~~~~-~-ip 143 (338)
T PRK12475 95 -------EVEIVPVVTDVT-------VEE-LEELVKEVDLIIDATDN------FDTRL--------LINDLSQKY-N-IP 143 (338)
T ss_pred -------CcEEEEEeccCC-------HHH-HHHHhcCCCEEEEcCCC------HHHHH--------HHHHHHHHc-C-CC
Confidence 245777888877 343 34778899999987532 22111 234566664 4 46
Q ss_pred EEEEecceeecC
Q 008324 157 FVHVSTAYVAGE 168 (570)
Q Consensus 157 ~V~vSTa~v~~~ 168 (570)
+|+.+....+|.
T Consensus 144 ~i~~~~~g~~G~ 155 (338)
T PRK12475 144 WIYGGCVGSYGV 155 (338)
T ss_pred EEEEEecccEEE
Confidence 888877665553
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.01 Score=62.98 Aligned_cols=37 Identities=19% Similarity=0.294 Sum_probs=31.2
Q ss_pred cCCCEEEEECC----------------cchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGV----------------TGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGa----------------TGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
++||+|+|||| ||.+|.++++.|...| .+|+++.++.
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~G---a~V~~~~g~~ 235 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRG---ADVTLITGPV 235 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCC---CEEEEeCCCC
Confidence 67999999998 5789999999999999 5667666544
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.051 Score=52.27 Aligned_cols=131 Identities=13% Similarity=0.172 Sum_probs=78.8
Q ss_pred HHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH------HHH---hhhhhHHHHHhhhc
Q 008324 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ------NEV---LAKDVFNVLKEKWG 76 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~------~~l---~~~~~f~~l~~~~~ 76 (570)
.++-+++.+|+|.|++| +|..+++.|.+.| |+++.++....-..+-..|.. +++ -...+-++|++.+|
T Consensus 13 ~q~~L~~s~VlviG~gg-lGsevak~L~~~G--Vg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp 89 (198)
T cd01485 13 AQNKLRSAKVLIIGAGA-LGAEIAKNLVLAG--IDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNP 89 (198)
T ss_pred HHHHHhhCcEEEECCCH-HHHHHHHHHHHcC--CCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCC
Confidence 45677889999999888 9999999999976 688888876543222111110 000 00112345555554
Q ss_pred cccccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceE
Q 008324 77 TRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKV 156 (570)
Q Consensus 77 ~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~ 156 (570)
. -+++.+..++.+. .+....++++.|+||.+-. +... ...+-++|++. + ..
T Consensus 90 ~-------v~i~~~~~~~~~~------~~~~~~~~~~~dvVi~~~d------~~~~--------~~~ln~~c~~~-~-ip 140 (198)
T cd01485 90 N-------VKLSIVEEDSLSN------DSNIEEYLQKFTLVIATEE------NYER--------TAKVNDVCRKH-H-IP 140 (198)
T ss_pred C-------CEEEEEecccccc------hhhHHHHHhCCCEEEECCC------CHHH--------HHHHHHHHHHc-C-CC
Confidence 2 4566676666521 1222466788999996632 1222 22344778875 4 47
Q ss_pred EEEEecceeecC
Q 008324 157 FVHVSTAYVAGE 168 (570)
Q Consensus 157 ~V~vSTa~v~~~ 168 (570)
+|+.++...+|.
T Consensus 141 ~i~~~~~G~~G~ 152 (198)
T cd01485 141 FISCATYGLIGY 152 (198)
T ss_pred EEEEEeecCEEE
Confidence 888888766653
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.054 Score=56.57 Aligned_cols=129 Identities=19% Similarity=0.198 Sum_probs=79.6
Q ss_pred HHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHHh----h-hhhHHHHHhhhc
Q 008324 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEVL----A-KDVFNVLKEKWG 76 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l~----~-~~~f~~l~~~~~ 76 (570)
-++-+++++|+|.|+ |.+|..+++.|.+.| |.+|.++.+..-..+-..|-. +++- + ...-+++++-+|
T Consensus 18 ~Q~~L~~~~VlVvG~-GglGs~va~~La~aG--vg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp 94 (339)
T PRK07688 18 GQQKLREKHVLIIGA-GALGTANAEMLVRAG--VGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINS 94 (339)
T ss_pred HHHHhcCCcEEEECC-CHHHHHHHHHHHHcC--CCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCC
Confidence 356788899999996 889999999999986 578888887642222111110 0110 0 011234444333
Q ss_pred cccccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceE
Q 008324 77 TRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKV 156 (570)
Q Consensus 77 ~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~ 156 (570)
. -++..+..+++ ..+. ..++++.|+|+.+... +. .-..+-++|.+. + ..
T Consensus 95 ~-------v~v~~~~~~~~-------~~~~-~~~~~~~DlVid~~Dn------~~--------~r~~ln~~~~~~-~-iP 143 (339)
T PRK07688 95 D-------VRVEAIVQDVT-------AEEL-EELVTGVDLIIDATDN------FE--------TRFIVNDAAQKY-G-IP 143 (339)
T ss_pred C-------cEEEEEeccCC-------HHHH-HHHHcCCCEEEEcCCC------HH--------HHHHHHHHHHHh-C-CC
Confidence 1 35677777877 4443 4678899999988432 21 122355677775 4 46
Q ss_pred EEEEecceeecC
Q 008324 157 FVHVSTAYVAGE 168 (570)
Q Consensus 157 ~V~vSTa~v~~~ 168 (570)
+|+.|+...+|.
T Consensus 144 ~i~~~~~g~~G~ 155 (339)
T PRK07688 144 WIYGACVGSYGL 155 (339)
T ss_pred EEEEeeeeeeeE
Confidence 889888776664
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.02 Score=66.11 Aligned_cols=165 Identities=16% Similarity=0.206 Sum_probs=111.8
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.|+.+|+||-|--|-.|+.-|..+|. .++++..|+.-..-...+. -.+++.+ .-+|.+-.
T Consensus 1768 eksYii~GGLGGFGLELaqWLi~RGa--r~lVLtSRsGirtGYQa~~---------vrrWr~~---------GVqV~vsT 1827 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGA--RKLVLTSRSGIRTGYQALM---------VRRWRRR---------GVQVQVST 1827 (2376)
T ss_pred cceEEEeccccchhHHHHHHHHhcCc--eEEEEeccccchhhHHHHH---------HHHHHhc---------CeEEEEec
Confidence 57899999999999999999999984 6677777875333222221 1233321 12444455
Q ss_pred ccCCCCCCCCCchhhHHHHhCC------ccEEEEcCccCCc----c---ccHHHHHHHhHHHHHHHHHHHHH-ccCceEE
Q 008324 92 GDISSEDLGLKDSNLKEELWNE------LDIMVNSAAITKF----D---ERYDVAFGINTLGVIHLVNFAKK-CVKLKVF 157 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~------vdiViH~AA~v~f----~---~~~~~~~~~Nv~gt~~ll~la~~-~~~l~~~ 157 (570)
.|++. .++. ..++++ +--|||+|+..+. + ++++..-+.-+.||.+|=+..++ |+.++-|
T Consensus 1828 ~nitt------~~ga-~~Li~~s~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyF 1900 (2376)
T KOG1202|consen 1828 SNITT------AEGA-RGLIEESNKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYF 1900 (2376)
T ss_pred ccchh------hhhH-HHHHHHhhhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceE
Confidence 67773 2332 345543 6789999998753 1 33555566788899999888876 5788999
Q ss_pred EEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHH
Q 008324 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (570)
Q Consensus 158 V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~ 237 (570)
|..||..+--... -...|+.+...
T Consensus 1901 v~FSSvscGRGN~--------------------------------------------------------GQtNYG~aNS~ 1924 (2376)
T KOG1202|consen 1901 VVFSSVSCGRGNA--------------------------------------------------------GQTNYGLANSA 1924 (2376)
T ss_pred EEEEeecccCCCC--------------------------------------------------------cccccchhhHH
Confidence 9999876432211 13569999999
Q ss_pred HHHHHHHh-ccCCcEEEEecCce
Q 008324 238 GEMLMQQS-KENLSLVIIRPTVV 259 (570)
Q Consensus 238 aE~lv~~~-~~~lp~~IvRPsiV 259 (570)
-|+++.+. ..++|-+.+.=|.|
T Consensus 1925 MERiceqRr~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1925 MERICEQRRHEGFPGTAIQWGAI 1947 (2376)
T ss_pred HHHHHHHhhhcCCCcceeeeecc
Confidence 99999876 56788777766554
|
|
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.055 Score=55.86 Aligned_cols=109 Identities=16% Similarity=0.149 Sum_probs=66.7
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccH-HHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA-ALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~-~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
++|.|+||||.+|..++..|+..+. ...|.++.|.++.... ..++ ++ .|.+... ..... +.
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~-~~~v~lvd~~~~~~~l~~~~~--dl-----~d~~~~~---------~~~~~-i~ 62 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDV-VKEINLISRPKSLEKLKGLRL--DI-----YDALAAA---------GIDAE-IK 62 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEECcccccccccccc--hh-----hhchhcc---------CCCcE-EE
Confidence 5899999999999999999998763 3468888885421111 1110 11 1100000 00111 11
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
+ + .+ . ..+.++|+||-+|+..+- .++....++.|+.-.+.+.+...+.
T Consensus 63 ~--~--------~d-~-~~l~~aDiViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~ 111 (309)
T cd05294 63 I--S--------SD-L-SDVAGSDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEF 111 (309)
T ss_pred E--C--------CC-H-HHhCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1 11 2 236899999999997653 2344566889999999998877765
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.0078 Score=59.22 Aligned_cols=29 Identities=21% Similarity=0.382 Sum_probs=22.7
Q ss_pred EEEC-CcchhHHHHHHHHHHhCCCccEEEEEEc
Q 008324 16 LVSG-VTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (570)
Q Consensus 16 lITG-aTGFlG~~LvekLl~~~~~V~~V~~lvR 47 (570)
+||. +||.||.++++.|++.| .+|+++.|
T Consensus 18 ~itN~SSGgIG~AIA~~la~~G---a~Vvlv~~ 47 (227)
T TIGR02114 18 SITNHSTGHLGKIITETFLSAG---HEVTLVTT 47 (227)
T ss_pred eecCCcccHHHHHHHHHHHHCC---CEEEEEcC
Confidence 4454 48999999999999999 56666654
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.013 Score=61.06 Aligned_cols=38 Identities=26% Similarity=0.316 Sum_probs=32.1
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
+++|+|.||||++|+.|++.|.++++.+.++..+.|.+
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~ 38 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASAR 38 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccc
Confidence 46899999999999999999998775556778887764
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.16 Score=50.65 Aligned_cols=127 Identities=17% Similarity=0.076 Sum_probs=76.8
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHHh--h-hhhHHHHHhhhcccc
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEVL--A-KDVFNVLKEKWGTRL 79 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l~--~-~~~f~~l~~~~~~~~ 79 (570)
++-+++++|+|.|+ |-+|..+++.|.+.| |+++.++....-..+-..|.. +++= + ...-++|++.+|.
T Consensus 27 Q~~L~~~~VliiG~-GglGs~va~~La~~G--vg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~-- 101 (245)
T PRK05690 27 QEKLKAARVLVVGL-GGLGCAASQYLAAAG--VGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPH-- 101 (245)
T ss_pred HHHhcCCeEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCC--
Confidence 56688999999997 889999999999976 688888876654333333311 0110 0 1112345544442
Q ss_pred ccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
-+++.+...++ ..+ ...+++++|+||.+... .+. -..+-++|.+. + ..+|+
T Consensus 102 -----v~i~~~~~~i~-------~~~-~~~~~~~~DiVi~~~D~------~~~--------r~~ln~~~~~~-~-ip~v~ 152 (245)
T PRK05690 102 -----IAIETINARLD-------DDE-LAALIAGHDLVLDCTDN------VAT--------RNQLNRACFAA-K-KPLVS 152 (245)
T ss_pred -----CEEEEEeccCC-------HHH-HHHHHhcCCEEEecCCC------HHH--------HHHHHHHHHHh-C-CEEEE
Confidence 35666766665 333 34677899999998642 211 12345667764 3 46777
Q ss_pred Eecceeec
Q 008324 160 VSTAYVAG 167 (570)
Q Consensus 160 vSTa~v~~ 167 (570)
.++....|
T Consensus 153 ~~~~g~~G 160 (245)
T PRK05690 153 GAAIRMEG 160 (245)
T ss_pred eeeccCCc
Confidence 65543333
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.031 Score=59.30 Aligned_cols=36 Identities=19% Similarity=0.370 Sum_probs=29.6
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcC
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~ 48 (570)
..++|.|.||||++|+.|++.|+++ |. .+|..+.+.
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~h-P~-~el~~l~s~ 72 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANH-PD-FEITVMTAD 72 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhC-CC-CeEEEEECh
Confidence 4468999999999999999988886 55 467777764
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.31 Score=50.46 Aligned_cols=114 Identities=11% Similarity=0.088 Sum_probs=72.8
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++++|.|+|| |.+|..++-.|+..+ -+.+++++.+.+........ ++.... .+ ..++...
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~-~~~el~L~D~~~~~~~g~~~---Dl~~~~--------------~~-~~~~~i~ 64 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQG-IADELVIIDINKEKAEGDAM---DLSHAV--------------PF-TSPTKIY 64 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCCchhHHHHH---HHHhhc--------------cc-cCCeEEE
Confidence 4679999998 999999999888764 34578888886543322111 221110 01 1233333
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
.+| . +.++++|+||-+|+..+- ..+....+..|..-.+.+++..++. +.+.++.
T Consensus 65 ~~~-------------~-~~~~~adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~-~~~~~vi 119 (315)
T PRK00066 65 AGD-------------Y-SDCKDADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMAS-GFDGIFL 119 (315)
T ss_pred eCC-------------H-HHhCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEE
Confidence 222 1 235799999999998543 3445667899999999998888875 4344433
|
|
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.12 Score=49.57 Aligned_cols=127 Identities=15% Similarity=0.209 Sum_probs=75.7
Q ss_pred HHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHHh---hhhhHHHHHhhhccc
Q 008324 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEVL---AKDVFNVLKEKWGTR 78 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l~---~~~~f~~l~~~~~~~ 78 (570)
-++-+++++|+|.|++| +|..+++.|.+.| |+++.++....-..+-..|.. +++- ...+-++|++.+|.
T Consensus 15 ~Q~~L~~s~VlIiG~gg-lG~evak~La~~G--Vg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~- 90 (197)
T cd01492 15 AQKRLRSARILLIGLKG-LGAEIAKNLVLSG--IGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPR- 90 (197)
T ss_pred HHHHHHhCcEEEEcCCH-HHHHHHHHHHHcC--CCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCC-
Confidence 45678899999999877 9999999999977 688888765542211111100 0000 01123455555552
Q ss_pred cccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEE
Q 008324 79 LNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 79 ~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V 158 (570)
-+++++...+++ . ....++++|+||.+... .+.. ..+-++|++. ++ .+|
T Consensus 91 ------v~i~~~~~~~~~-------~--~~~~~~~~dvVi~~~~~------~~~~--------~~ln~~c~~~-~i-p~i 139 (197)
T cd01492 91 ------VKVSVDTDDISE-------K--PEEFFSQFDVVVATELS------RAEL--------VKINELCRKL-GV-KFY 139 (197)
T ss_pred ------CEEEEEecCccc-------c--HHHHHhCCCEEEECCCC------HHHH--------HHHHHHHHHc-CC-CEE
Confidence 356666665551 1 13556889999976432 2222 2234677775 54 688
Q ss_pred EEecceeec
Q 008324 159 HVSTAYVAG 167 (570)
Q Consensus 159 ~vSTa~v~~ 167 (570)
+.++...+|
T Consensus 140 ~~~~~G~~G 148 (197)
T cd01492 140 ATGVHGLFG 148 (197)
T ss_pred EEEecCCEE
Confidence 888866555
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.059 Score=58.57 Aligned_cols=88 Identities=18% Similarity=0.180 Sum_probs=56.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+|+|+++ +|..+++.|++.| ..|.+..+..... ..++ ++.+. ...+.+
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G---~~V~~~d~~~~~~-~~~~----------~~~l~-----------~~~~~~ 56 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLKKLG---AKVILTDEKEEDQ-LKEA----------LEELG-----------ELGIEL 56 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHCC---CEEEEEeCCchHH-HHHH----------HHHHH-----------hcCCEE
Confidence 4789999999888 9999999999999 5667776643211 1111 11111 124567
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHH
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFG 135 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~ 135 (570)
+.+|..+ ....++|+||++++..........+.+
T Consensus 57 ~~~~~~~------------~~~~~~d~vv~~~g~~~~~~~~~~a~~ 90 (450)
T PRK14106 57 VLGEYPE------------EFLEGVDLVVVSPGVPLDSPPVVQAHK 90 (450)
T ss_pred EeCCcch------------hHhhcCCEEEECCCCCCCCHHHHHHHH
Confidence 7788762 234578999999987433333333333
|
|
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.13 Score=52.21 Aligned_cols=127 Identities=12% Similarity=0.115 Sum_probs=76.1
Q ss_pred HHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHHh--h-hhhHHHHHhhhccc
Q 008324 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEVL--A-KDVFNVLKEKWGTR 78 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l~--~-~~~f~~l~~~~~~~ 78 (570)
-++-+++.+|+|.|+ |-+|..+++.|.+.| |+++.++....-..+-..|.. +++= + ...-+++++.+|.
T Consensus 21 ~Q~kL~~s~VlIvG~-GGLGs~va~~LA~aG--VG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~- 96 (287)
T PRK08223 21 EQQRLRNSRVAIAGL-GGVGGIHLLTLARLG--IGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPE- 96 (287)
T ss_pred HHHHHhcCCEEEECC-CHHHHHHHHHHHHhC--CCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCC-
Confidence 356788999999996 559999999999987 588888776653332222210 0110 0 1122455555542
Q ss_pred cccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEE
Q 008324 79 LNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 79 ~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V 158 (570)
-+|+.+...++ +++. .++++++|+|+.+.-. | .. ..-..+-++|.+. + ..+|
T Consensus 97 ------v~V~~~~~~l~-------~~n~-~~ll~~~DlVvD~~D~--~--~~--------~~r~~ln~~c~~~-~-iP~V 148 (287)
T PRK08223 97 ------LEIRAFPEGIG-------KENA-DAFLDGVDVYVDGLDF--F--EF--------DARRLVFAACQQR-G-IPAL 148 (287)
T ss_pred ------CEEEEEecccC-------ccCH-HHHHhCCCEEEECCCC--C--cH--------HHHHHHHHHHHHc-C-CCEE
Confidence 46777777777 3333 4678899999965321 1 01 1123355677775 4 4677
Q ss_pred EEecce
Q 008324 159 HVSTAY 164 (570)
Q Consensus 159 ~vSTa~ 164 (570)
+.|+..
T Consensus 149 ~~~~~g 154 (287)
T PRK08223 149 TAAPLG 154 (287)
T ss_pred EEeccC
Confidence 765543
|
|
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.14 Score=53.11 Aligned_cols=119 Identities=15% Similarity=0.090 Sum_probs=72.1
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCcc-----EEEEEEcCCCc-ccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVK-----KLYLFVRAADI-DSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~-----~V~~lvR~~~~-~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
-+|.|+||+|++|..++-.|+..+ -+. .++++.+.+.. ....+.+ ++..... .. ...
T Consensus 4 ~KV~IIGa~G~VG~~~a~~l~~~~-~~~~~~~~el~L~Di~~~~~~a~g~a~--Dl~~~~~-------------~~-~~~ 66 (323)
T TIGR01759 4 VRVAVTGAAGQIGYSLLFRIASGE-LFGKDQPVVLHLLDIPPAMKALEGVAM--ELEDCAF-------------PL-LAG 66 (323)
T ss_pred eEEEEECCCcHHHHHHHHHHHhCC-cccCCCccEEEEEecCCcccccchHHH--HHhhccc-------------cc-cCC
Confidence 489999999999999999888754 234 68888775422 1111111 2211100 00 011
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEec
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vST 162 (570)
+.+. ++ + .+.++++|+|+.+||..+- .++..+.+..|+.-.+.+...+++...-+.++.+-|
T Consensus 67 ~~i~-~~-----------~--~~~~~daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs 129 (323)
T TIGR01759 67 VVAT-TD-----------P--EEAFKDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG 129 (323)
T ss_pred cEEe-cC-----------h--HHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 2111 11 1 1445789999999998642 345667799999999999998888622144444433
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.066 Score=56.17 Aligned_cols=34 Identities=21% Similarity=0.471 Sum_probs=25.7
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEc
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR 47 (570)
++|.|.||||++|+.+++.|.+. |.+.-+.++.+
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~h-P~~el~~l~~s 34 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNH-PEVEITYLVSS 34 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcC-CCceEEEEecc
Confidence 47999999999999999999864 66543334343
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.24 Score=49.11 Aligned_cols=128 Identities=18% Similarity=0.114 Sum_probs=77.0
Q ss_pred HHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHHhh---hhhHHHHHhhhccc
Q 008324 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEVLA---KDVFNVLKEKWGTR 78 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l~~---~~~f~~l~~~~~~~ 78 (570)
-++-+++++|+|.|+ |-+|..+++.|.+.| |+++.++.+..-..+-..|.. +++=. ...-+++++.+|.
T Consensus 18 ~q~~L~~~~VlvvG~-GglGs~va~~La~~G--vg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~- 93 (240)
T TIGR02355 18 GQEALKASRVLIVGL-GGLGCAASQYLAAAG--VGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPH- 93 (240)
T ss_pred HHHHHhCCcEEEECc-CHHHHHHHHHHHHcC--CCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCC-
Confidence 467788999999995 669999999999976 688888877654333222210 01100 1112445554442
Q ss_pred cccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEE
Q 008324 79 LNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 79 ~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V 158 (570)
-++..+...++ .++ ..+++++.|+||.+.-. .+. ...+-++|.+. + ..+|
T Consensus 94 ------v~i~~~~~~i~-------~~~-~~~~~~~~DlVvd~~D~------~~~--------r~~ln~~~~~~-~-ip~v 143 (240)
T TIGR02355 94 ------IAINPINAKLD-------DAE-LAALIAEHDIVVDCTDN------VEV--------RNQLNRQCFAA-K-VPLV 143 (240)
T ss_pred ------cEEEEEeccCC-------HHH-HHHHhhcCCEEEEcCCC------HHH--------HHHHHHHHHHc-C-CCEE
Confidence 35666655554 333 34678899999988643 221 12344677764 3 4678
Q ss_pred EEecceeec
Q 008324 159 HVSTAYVAG 167 (570)
Q Consensus 159 ~vSTa~v~~ 167 (570)
+.++....|
T Consensus 144 ~~~~~g~~G 152 (240)
T TIGR02355 144 SGAAIRMEG 152 (240)
T ss_pred EEEecccEe
Confidence 866654444
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.062 Score=48.25 Aligned_cols=38 Identities=24% Similarity=0.342 Sum_probs=33.2
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-++|++|+|.|| |-.|+.++..|...|. .+|++..|+.
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~--~~i~i~nRt~ 46 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGA--KEITIVNRTP 46 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTS--SEEEEEESSH
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCC--CEEEEEECCH
Confidence 478999999997 7799999999999864 7899999975
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.37 Score=46.47 Aligned_cols=128 Identities=14% Similarity=0.098 Sum_probs=76.9
Q ss_pred HHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHH---hhhhhHHHHHhhhccc
Q 008324 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEV---LAKDVFNVLKEKWGTR 78 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l---~~~~~f~~l~~~~~~~ 78 (570)
-++-+++++|+|.| .|-+|..+++.|.+.| |+++.++.+..-..+-..|.. +++ -...+-+++++.+|.
T Consensus 15 ~q~kl~~~~VlviG-~GglGs~ia~~La~~G--v~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~- 90 (202)
T TIGR02356 15 GQQRLLNSHVLIIG-AGGLGSPAALYLAGAG--VGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSD- 90 (202)
T ss_pred HHHHhcCCCEEEEC-CCHHHHHHHHHHHHcC--CCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCC-
Confidence 46778899999999 5679999999999987 578888877643322222210 000 001112344444331
Q ss_pred cccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEE
Q 008324 79 LNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 79 ~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V 158 (570)
-++..+...+. .++ ...+++++|+||.+... ++. -..+-++|++. + ..+|
T Consensus 91 ------v~i~~~~~~i~-------~~~-~~~~~~~~D~Vi~~~d~------~~~--------r~~l~~~~~~~-~-ip~i 140 (202)
T TIGR02356 91 ------IQVTALKERVT-------AEN-LELLINNVDLVLDCTDN------FAT--------RYLINDACVAL-G-TPLI 140 (202)
T ss_pred ------CEEEEehhcCC-------HHH-HHHHHhCCCEEEECCCC------HHH--------HHHHHHHHHHc-C-CCEE
Confidence 35556666665 333 34677899999987543 221 12345677774 4 4688
Q ss_pred EEecceeec
Q 008324 159 HVSTAYVAG 167 (570)
Q Consensus 159 ~vSTa~v~~ 167 (570)
+.++...+|
T Consensus 141 ~~~~~g~~G 149 (202)
T TIGR02356 141 SAAVVGFGG 149 (202)
T ss_pred EEEeccCeE
Confidence 888765554
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.024 Score=57.51 Aligned_cols=76 Identities=17% Similarity=0.279 Sum_probs=49.9
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
..++|-|||||.|+.++|+|.+++. +-.+-.|+.. . .++|+++.+..+ ....
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~---~~aLAgRs~~---k-------------l~~l~~~LG~~~--------~~~p- 58 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGL---TAALAGRSSA---K-------------LDALRASLGPEA--------AVFP- 58 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCC---chhhccCCHH---H-------------HHHHHHhcCccc--------cccC-
Confidence 4689999999999999999999883 3334445432 1 234444433221 1111
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccC
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAIT 124 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v 124 (570)
+. .++..+++++.+++|+||+|+.
T Consensus 59 -~~-------~p~~~~~~~~~~~VVlncvGPy 82 (382)
T COG3268 59 -LG-------VPAALEAMASRTQVVLNCVGPY 82 (382)
T ss_pred -CC-------CHHHHHHHHhcceEEEeccccc
Confidence 11 3555678889999999999984
|
|
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.33 Score=50.43 Aligned_cols=118 Identities=11% Similarity=0.054 Sum_probs=70.7
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCcc-----EEEEEEcCCCc-ccHHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVK-----KLYLFVRAADI-DSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~-----~V~~lvR~~~~-~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
.++|.|+||+|.+|..++-.|+..+- .. .+.++.+.+.. ....+.+ ++..... .+ ..
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~~~-~~~~~~~el~LiDi~~~~~~~~g~a~--Dl~~~~~-------------~~-~~ 66 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASGDM-LGKDQPVILQLLEIPPALKALEGVVM--ELDDCAF-------------PL-LA 66 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhhhh-cCCCCccEEEEEecCCcccccceeeh--hhhhhhh-------------hh-cC
Confidence 46899999999999999998886442 23 67777764321 1111111 1111100 00 11
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEE
Q 008324 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~-f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~v 160 (570)
++.+. + .+ .+.++++|+||-+||..+ -.++..+.+..|+.-.+++.+..++..+-+.++.+
T Consensus 67 ~~~i~-~-----------~~--y~~~~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiiv 128 (326)
T PRK05442 67 GVVIT-D-----------DP--NVAFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLV 128 (326)
T ss_pred CcEEe-c-----------Ch--HHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence 22221 1 11 144578999999999754 33456677999999999999988884333444433
|
|
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.25 Score=52.06 Aligned_cols=127 Identities=13% Similarity=0.007 Sum_probs=77.4
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHHhh---hhhHHHHHhhhcccc
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEVLA---KDVFNVLKEKWGTRL 79 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l~~---~~~f~~l~~~~~~~~ 79 (570)
++-+++++|+|.|+ |-+|..+++.|.+.| |+++.++....-..+-..|.. +++=. ...-++|++.+|.
T Consensus 23 q~~L~~~~VlivG~-GGlGs~~a~~La~~G--vg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~-- 97 (355)
T PRK05597 23 QQSLFDAKVAVIGA-GGLGSPALLYLAGAG--VGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPD-- 97 (355)
T ss_pred HHHHhCCeEEEECC-CHHHHHHHHHHHHcC--CCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCC--
Confidence 56688999999996 669999999999876 688888877652222222200 00000 0122455555542
Q ss_pred ccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
-+++.+...++ .++. ..+++++|+|+.+... ... -..+-++|.+. + ..||+
T Consensus 98 -----v~v~~~~~~i~-------~~~~-~~~~~~~DvVvd~~d~------~~~--------r~~~n~~c~~~-~-ip~v~ 148 (355)
T PRK05597 98 -----VKVTVSVRRLT-------WSNA-LDELRDADVILDGSDN------FDT--------RHLASWAAARL-G-IPHVW 148 (355)
T ss_pred -----cEEEEEEeecC-------HHHH-HHHHhCCCEEEECCCC------HHH--------HHHHHHHHHHc-C-CCEEE
Confidence 45777777776 3333 3677899999998643 111 11244567764 3 46888
Q ss_pred Eecceeec
Q 008324 160 VSTAYVAG 167 (570)
Q Consensus 160 vSTa~v~~ 167 (570)
.++....|
T Consensus 149 ~~~~g~~g 156 (355)
T PRK05597 149 ASILGFDA 156 (355)
T ss_pred EEEecCeE
Confidence 77655444
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.29 Score=48.13 Aligned_cols=128 Identities=21% Similarity=0.104 Sum_probs=75.3
Q ss_pred HHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHHh---hhhhHHHHHhhhccc
Q 008324 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEVL---AKDVFNVLKEKWGTR 78 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l~---~~~~f~~l~~~~~~~ 78 (570)
-++-+++++|+|.| .|-+|.++++.|.+.| |+++.++....-..+-..|.. +++= ...+-+++++.+|.
T Consensus 15 ~q~~L~~~~VlivG-~GglGs~va~~La~~G--vg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~- 90 (228)
T cd00757 15 GQEKLKNARVLVVG-AGGLGSPAAEYLAAAG--VGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPD- 90 (228)
T ss_pred HHHHHhCCcEEEEC-CCHHHHHHHHHHHHcC--CCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCC-
Confidence 36678899999999 4669999999999987 577777654432111111100 0000 01112344444432
Q ss_pred cccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEE
Q 008324 79 LNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 79 ~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V 158 (570)
-++..+..+++ .++. ..+++++|+||.|.... +. -..+-++|.+. + ..+|
T Consensus 91 ------~~i~~~~~~i~-------~~~~-~~~~~~~DvVi~~~d~~------~~--------r~~l~~~~~~~-~-ip~i 140 (228)
T cd00757 91 ------VEIEAYNERLD-------AENA-EELIAGYDLVLDCTDNF------AT--------RYLINDACVKL-G-KPLV 140 (228)
T ss_pred ------CEEEEecceeC-------HHHH-HHHHhCCCEEEEcCCCH------HH--------HHHHHHHHHHc-C-CCEE
Confidence 35666766665 3333 46778899999986541 11 12355677774 4 5788
Q ss_pred EEecceeec
Q 008324 159 HVSTAYVAG 167 (570)
Q Consensus 159 ~vSTa~v~~ 167 (570)
+.++....|
T Consensus 141 ~~g~~g~~g 149 (228)
T cd00757 141 SGAVLGFEG 149 (228)
T ss_pred EEEeccCEE
Confidence 887655444
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.7 Score=49.85 Aligned_cols=119 Identities=13% Similarity=0.080 Sum_probs=73.7
Q ss_pred CCEEEEECCcchhHHHHHHHHHHh---C---CCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRV---Q---PNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~---~---~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
--+|.|+||+|.+|.+++-.|+.. + +-+.+++++.+.+........ ||.... | .+ ..
T Consensus 100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~am---DL~daa-~------------~~-~~ 162 (444)
T PLN00112 100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAM---ELEDSL-Y------------PL-LR 162 (444)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHH---HHHHhh-h------------hh-cC
Confidence 348999999999999999999875 1 223467777776554332211 222111 0 00 12
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceE-EEEEe
Q 008324 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKV-FVHVS 161 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~-~V~vS 161 (570)
++.+..+| .+.++++|+||-+||..+- .+.-.+.++.|+.-.+.+.+...+..+... +|.+|
T Consensus 163 ~v~i~~~~--------------ye~~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVs 226 (444)
T PLN00112 163 EVSIGIDP--------------YEVFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVG 226 (444)
T ss_pred ceEEecCC--------------HHHhCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcC
Confidence 23222222 1345789999999998653 344566799999999999999888213333 44444
|
|
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.05 Score=56.86 Aligned_cols=36 Identities=19% Similarity=0.317 Sum_probs=29.5
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
+|+|.||||++|..|++.|.++++.+.++..+.+..
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~ 36 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDR 36 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccc
Confidence 589999999999999999988766666776666654
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.71 Score=47.57 Aligned_cols=113 Identities=20% Similarity=0.160 Sum_probs=70.3
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|+||||.+|..++-.|+..+ -+.++.++.+.+....+. +|.... ...++....+
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~-~~~elvLiDi~~a~g~al-----DL~~~~----------------~~~~i~~~~~ 58 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNP-LVSELALYDIVNTPGVAA-----DLSHIN----------------TPAKVTGYLG 58 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-CCcEEEEEecCccceeeh-----HhHhCC----------------CcceEEEecC
Confidence 489999999999999999887654 345677776652111111 111000 0012221112
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
+.+. .+.++++|+|+-+||..+- .+.-.+.++.|+.-.+.+.+..++. +.+.++.
T Consensus 59 ----------~~~~-y~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~-~p~a~vi 114 (310)
T cd01337 59 ----------PEEL-KKALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKA-CPKALIL 114 (310)
T ss_pred ----------CCch-HHhcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEE
Confidence 1122 2556899999999998643 3455667999999999999888876 4444443
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.18 Score=59.66 Aligned_cols=79 Identities=18% Similarity=0.184 Sum_probs=51.8
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCcc------------EEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccc
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVK------------KLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTR 78 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~------------~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~ 78 (570)
+.|+|+|.|| |++|+..++.|.+. +++. .|.+..+.... .+++.+ .
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~-~~~~~~~~~~~~~~~~lV~VaD~~~~~---a~~la~-------------~---- 625 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASV-KTISYYGDDSEEPTDVHVIVASLYLKD---AKETVE-------------G---- 625 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhC-cCccccccccccccccEEEEECCCHHH---HHHHHH-------------h----
Confidence 4679999996 99999999999875 4432 34444443211 122221 1
Q ss_pred cccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCcc
Q 008324 79 LNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAI 123 (570)
Q Consensus 79 ~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~ 123 (570)
.+++..+..|++ +.+.+..+++++|+|+.+...
T Consensus 626 -----~~~~~~v~lDv~-------D~e~L~~~v~~~DaVIsalP~ 658 (1042)
T PLN02819 626 -----IENAEAVQLDVS-------DSESLLKYVSQVDVVISLLPA 658 (1042)
T ss_pred -----cCCCceEEeecC-------CHHHHHHhhcCCCEEEECCCc
Confidence 135678899988 444445666789999998765
|
|
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=94.60 E-value=0.28 Score=52.33 Aligned_cols=128 Identities=13% Similarity=0.088 Sum_probs=78.6
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHH--H--HHHHh---hhhhHHHHHhhhcccc
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALR--F--QNEVL---AKDVFNVLKEKWGTRL 79 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~r--l--~~~l~---~~~~f~~l~~~~~~~~ 79 (570)
++-+++.+|+|.|+ |-+|..+++.|.+.| |+++.++....-..+-..| + .+++= ....-++|++.+|.
T Consensus 33 q~~L~~~~VlivG~-GGlG~~va~~La~~G--vg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~-- 107 (390)
T PRK07411 33 QKRLKAASVLCIGT-GGLGSPLLLYLAAAG--IGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPY-- 107 (390)
T ss_pred HHHHhcCcEEEECC-CHHHHHHHHHHHHcC--CCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCC--
Confidence 56688899999996 559999999999977 6788877665433322222 0 00110 01123455555542
Q ss_pred ccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
-+|+.+...++ .+.. ..+++++|+|+.|... ++.-. .+-++|.+. + +.+||
T Consensus 108 -----v~v~~~~~~~~-------~~~~-~~~~~~~D~Vvd~~d~------~~~r~--------~ln~~~~~~-~-~p~v~ 158 (390)
T PRK07411 108 -----CQVDLYETRLS-------SENA-LDILAPYDVVVDGTDN------FPTRY--------LVNDACVLL-N-KPNVY 158 (390)
T ss_pred -----CeEEEEecccC-------HHhH-HHHHhCCCEEEECCCC------HHHHH--------HHHHHHHHc-C-CCEEE
Confidence 46778888777 3332 3677899999998643 22111 233566664 3 57888
Q ss_pred EecceeecC
Q 008324 160 VSTAYVAGE 168 (570)
Q Consensus 160 vSTa~v~~~ 168 (570)
.+....+|.
T Consensus 159 ~~~~g~~g~ 167 (390)
T PRK07411 159 GSIFRFEGQ 167 (390)
T ss_pred EEEccCEEE
Confidence 777655553
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.61 Score=45.96 Aligned_cols=124 Identities=21% Similarity=0.167 Sum_probs=72.9
Q ss_pred HHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHHh--h-hhhHHHHHhhhccc
Q 008324 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEVL--A-KDVFNVLKEKWGTR 78 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l~--~-~~~f~~l~~~~~~~ 78 (570)
-++-+++++|+|.|+ |-+|..+++.|.+.| |.++.++....-..+-..|.. +++= + ..+-+++++.+|.
T Consensus 5 ~~~~L~~~~VlVvG~-GGvGs~va~~Lar~G--Vg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~- 80 (231)
T cd00755 5 GLEKLRNAHVAVVGL-GGVGSWAAEALARSG--VGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPE- 80 (231)
T ss_pred HHHHHhCCCEEEECC-CHHHHHHHHHHHHcC--CCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCC-
Confidence 356778999999995 669999999999987 578887766542222222210 0000 0 1112455555442
Q ss_pred cccccCCceEEEeccCCCCCCCCCchhhHHHHh-CCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEE
Q 008324 79 LNSFISEKITFVPGDISSEDLGLKDSNLKEELW-NELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVF 157 (570)
Q Consensus 79 ~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~-~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~ 157 (570)
-+++.+...++ .+.. ..++ ++.|+||.+... .. ....+.++|.+. + ..+
T Consensus 81 ------~~V~~~~~~i~-------~~~~-~~l~~~~~D~VvdaiD~------~~--------~k~~L~~~c~~~-~-ip~ 130 (231)
T cd00755 81 ------CEVDAVEEFLT-------PDNS-EDLLGGDPDFVVDAIDS------IR--------AKVALIAYCRKR-K-IPV 130 (231)
T ss_pred ------cEEEEeeeecC-------HhHH-HHHhcCCCCEEEEcCCC------HH--------HHHHHHHHHHHh-C-CCE
Confidence 46777777766 3332 2344 469999988543 11 223466788875 4 346
Q ss_pred EEEecc
Q 008324 158 VHVSTA 163 (570)
Q Consensus 158 V~vSTa 163 (570)
|...++
T Consensus 131 I~s~g~ 136 (231)
T cd00755 131 ISSMGA 136 (231)
T ss_pred EEEeCC
Confidence 655444
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=94.48 E-value=0.39 Score=42.92 Aligned_cols=123 Identities=21% Similarity=0.277 Sum_probs=71.2
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHH--HH-H-HH--hh-hhhHHHHHhhhcccccccc
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALR--FQ-N-EV--LA-KDVFNVLKEKWGTRLNSFI 83 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~r--l~-~-~l--~~-~~~f~~l~~~~~~~~~~~~ 83 (570)
++++|+|.|+ |-+|..+++.|.+.| |.++.+.....-...-..| +. . ++ .+ ..+-+++++..|
T Consensus 1 r~~~v~iiG~-G~vGs~va~~L~~~G--v~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np------- 70 (135)
T PF00899_consen 1 RNKRVLIIGA-GGVGSEVAKNLARSG--VGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINP------- 70 (135)
T ss_dssp HT-EEEEEST-SHHHHHHHHHHHHHT--TSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHST-------
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHhC--CCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcC-------
Confidence 3679999995 669999999999987 4777777654311110000 00 0 00 00 011234444444
Q ss_pred CCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecc
Q 008324 84 SEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (570)
Q Consensus 84 ~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa 163 (570)
.-++..+..+++ ++.. ..++++.|+||.+... .. .-..+-+.|++. + .++|+.++.
T Consensus 71 ~~~v~~~~~~~~-------~~~~-~~~~~~~d~vi~~~d~------~~--------~~~~l~~~~~~~-~-~p~i~~~~~ 126 (135)
T PF00899_consen 71 DVEVEAIPEKID-------EENI-EELLKDYDIVIDCVDS------LA--------ARLLLNEICREY-G-IPFIDAGVN 126 (135)
T ss_dssp TSEEEEEESHCS-------HHHH-HHHHHTSSEEEEESSS------HH--------HHHHHHHHHHHT-T--EEEEEEEE
T ss_pred ceeeeeeecccc-------cccc-cccccCCCEEEEecCC------HH--------HHHHHHHHHHHc-C-CCEEEEEee
Confidence 256788888885 4443 4777899999998543 11 123456677774 4 368888776
Q ss_pred eeec
Q 008324 164 YVAG 167 (570)
Q Consensus 164 ~v~~ 167 (570)
..+|
T Consensus 127 g~~G 130 (135)
T PF00899_consen 127 GFYG 130 (135)
T ss_dssp TTEE
T ss_pred cCEE
Confidence 5444
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.51 Score=47.48 Aligned_cols=124 Identities=15% Similarity=0.167 Sum_probs=70.5
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHH--hh-hhhHHHHHhhhcccc
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEV--LA-KDVFNVLKEKWGTRL 79 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l--~~-~~~f~~l~~~~~~~~ 79 (570)
++-+++.+|+|.|+ |-+|.++++.|.+.| |+++.++....-..+-..|.. +++ .+ ..+-+++++.+|.
T Consensus 25 ~~kL~~s~VlVvG~-GGVGs~vae~Lar~G--Vg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~-- 99 (268)
T PRK15116 25 LQLFADAHICVVGI-GGVGSWAAEALARTG--IGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPE-- 99 (268)
T ss_pred HHHhcCCCEEEECc-CHHHHHHHHHHHHcC--CCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCC--
Confidence 35578899999985 669999999999987 578888776542222222200 000 00 0122455544442
Q ss_pred ccccCCceEEEeccCCCCCCCCCchhhHHHHh-CCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEE
Q 008324 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELW-NELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~-~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V 158 (570)
-+|..+..-++ .+.. ..++ .+.|+||.+.... ..-..+.+.|++. + ..+|
T Consensus 100 -----~~V~~i~~~i~-------~e~~-~~ll~~~~D~VIdaiD~~--------------~~k~~L~~~c~~~-~-ip~I 150 (268)
T PRK15116 100 -----CRVTVVDDFIT-------PDNV-AEYMSAGFSYVIDAIDSV--------------RPKAALIAYCRRN-K-IPLV 150 (268)
T ss_pred -----cEEEEEecccC-------hhhH-HHHhcCCCCEEEEcCCCH--------------HHHHHHHHHHHHc-C-CCEE
Confidence 35555544333 2332 3444 4799999886542 1123467788875 4 3566
Q ss_pred EEecce
Q 008324 159 HVSTAY 164 (570)
Q Consensus 159 ~vSTa~ 164 (570)
++..+.
T Consensus 151 ~~gGag 156 (268)
T PRK15116 151 TTGGAG 156 (268)
T ss_pred EECCcc
Confidence 655443
|
|
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=94.42 E-value=0.37 Score=51.47 Aligned_cols=128 Identities=17% Similarity=0.126 Sum_probs=76.8
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHHhh---hhhHHHHHhhhcccc
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEVLA---KDVFNVLKEKWGTRL 79 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l~~---~~~f~~l~~~~~~~~ 79 (570)
++-+++.+|+|.|+ |-+|..++..|.+.| |+++.++....-..+-..|-. +++=+ ...-++|++.+|.
T Consensus 37 q~~L~~~~VlviG~-GGlGs~va~~La~~G--vg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~-- 111 (392)
T PRK07878 37 QKRLKNARVLVIGA-GGLGSPTLLYLAAAG--VGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPL-- 111 (392)
T ss_pred HHHHhcCCEEEECC-CHHHHHHHHHHHHcC--CCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCC--
Confidence 45678899999995 559999999999977 578887766543322222200 01100 0112344544442
Q ss_pred ccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
-+|..+...++ ..+. ..+++++|+|+.|... .. .-..+-++|.+. + ..||+
T Consensus 112 -----v~i~~~~~~i~-------~~~~-~~~~~~~D~Vvd~~d~------~~--------~r~~ln~~~~~~-~-~p~v~ 162 (392)
T PRK07878 112 -----VNVRLHEFRLD-------PSNA-VELFSQYDLILDGTDN------FA--------TRYLVNDAAVLA-G-KPYVW 162 (392)
T ss_pred -----cEEEEEeccCC-------hhHH-HHHHhcCCEEEECCCC------HH--------HHHHHHHHHHHc-C-CCEEE
Confidence 35666777776 3332 4677899999987532 11 112245677775 4 56888
Q ss_pred EecceeecC
Q 008324 160 VSTAYVAGE 168 (570)
Q Consensus 160 vSTa~v~~~ 168 (570)
.++...+|.
T Consensus 163 ~~~~g~~G~ 171 (392)
T PRK07878 163 GSIYRFEGQ 171 (392)
T ss_pred EEeccCEEE
Confidence 887766663
|
|
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=94.34 E-value=0.1 Score=54.54 Aligned_cols=37 Identities=19% Similarity=0.325 Sum_probs=28.9
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEc
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR 47 (570)
...+|.|.||||++|..|++.|.++++.+.++..+..
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las 42 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLAS 42 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEc
Confidence 3568999999999999999999886644456655544
|
|
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.29 E-value=0.93 Score=44.66 Aligned_cols=129 Identities=19% Similarity=0.165 Sum_probs=76.6
Q ss_pred HHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHHhh---h-hhHHHHHhhhcc
Q 008324 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEVLA---K-DVFNVLKEKWGT 77 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l~~---~-~~f~~l~~~~~~ 77 (570)
-++-+++++|+|.|+ |-+|..+++.|.+.| |++++++....-..+-..|-. +++-. . ..-+++++.+|.
T Consensus 21 ~q~~L~~~~VlIiG~-GGlGs~ia~~La~~G--vg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~ 97 (231)
T PRK08328 21 GQEKLKKAKVAVVGV-GGLGSPVAYYLAAAG--VGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSD 97 (231)
T ss_pred HHHHHhCCcEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCC
Confidence 356678899999995 569999999999976 588888866553333222210 01100 0 001233333331
Q ss_pred ccccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEE
Q 008324 78 RLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVF 157 (570)
Q Consensus 78 ~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~ 157 (570)
-+|..+.+.++ +++ ...++++.|+||.+... .+. -..+-++|++. + ..+
T Consensus 98 -------v~v~~~~~~~~-------~~~-~~~~l~~~D~Vid~~d~------~~~--------r~~l~~~~~~~-~-ip~ 146 (231)
T PRK08328 98 -------IKIETFVGRLS-------EEN-IDEVLKGVDVIVDCLDN------FET--------RYLLDDYAHKK-G-IPL 146 (231)
T ss_pred -------CEEEEEeccCC-------HHH-HHHHHhcCCEEEECCCC------HHH--------HHHHHHHHHHc-C-CCE
Confidence 35666666665 333 34677899999988643 111 11233567764 4 568
Q ss_pred EEEecceeecC
Q 008324 158 VHVSTAYVAGE 168 (570)
Q Consensus 158 V~vSTa~v~~~ 168 (570)
|+.++...+|.
T Consensus 147 i~g~~~g~~G~ 157 (231)
T PRK08328 147 VHGAVEGTYGQ 157 (231)
T ss_pred EEEeeccCEEE
Confidence 88888766664
|
|
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=94.26 E-value=1 Score=47.84 Aligned_cols=118 Identities=13% Similarity=0.065 Sum_probs=69.6
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCcc-----EEEEE--EcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccC
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVK-----KLYLF--VRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~-----~V~~l--vR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
--+|.|+||+|.+|..++-.|+..+- .. .+.++ .+.+...... .+ +|...-. + + .
T Consensus 44 p~KV~IIGAaG~VG~~~A~~l~~~~l-~~~~~ei~L~L~diD~~~~~a~g~-a~--DL~d~a~--------~-----~-~ 105 (387)
T TIGR01757 44 TVNVAVSGAAGMISNHLLFMLASGEV-FGQDQPIALKLLGSERSKEALEGV-AM--ELEDSLY--------P-----L-L 105 (387)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccc-cCCCCceEEEEeccCccchhhhHH-HH--HHHHhhh--------h-----h-c
Confidence 35899999999999999999987542 22 12222 3333222111 11 2222110 0 0 1
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEe
Q 008324 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vS 161 (570)
.++.+..+| .+.++++|+||-+||..+- .++-.+.+..|+.-.+.+.....+..+...+|.+-
T Consensus 106 ~~v~i~~~~--------------y~~~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVV 169 (387)
T TIGR01757 106 REVSIGIDP--------------YEVFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVV 169 (387)
T ss_pred CceEEecCC--------------HHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEc
Confidence 233222222 1345899999999998643 34556678999999999999998853344444433
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=94.26 E-value=0.76 Score=47.18 Aligned_cols=117 Identities=17% Similarity=0.112 Sum_probs=73.2
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|+|| |.+|+.++-.|+..+.. ..++++.+.++..... .+ ++.....+ .... ..+.+
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~-~el~LiDi~~~~~~G~-a~--DL~~~~~~--------------~~~~-~~i~~ 60 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLG-SELVLIDINEEKAEGV-AL--DLSHAAAP--------------LGSD-VKITG 60 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhccccc-ceEEEEEcccccccch-hc--chhhcchh--------------ccCc-eEEec
Confidence 57999999 99999999999765432 2788888874332221 11 22111110 0111 12222
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc-ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEec
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~-~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vST 162 (570)
| . + ...+++.|+|+-+||..+-. ..-.+.++.|..-.+.+.+...+. ..+.++.|-|
T Consensus 61 ~-~---------~--y~~~~~aDiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~-~~d~ivlVvt 118 (313)
T COG0039 61 D-G---------D--YEDLKGADIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKY-APDAIVLVVT 118 (313)
T ss_pred C-C---------C--hhhhcCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCeEEEEec
Confidence 2 1 1 14458899999999987543 345567999999999998888876 4456666554
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=94.16 E-value=0.94 Score=48.11 Aligned_cols=127 Identities=17% Similarity=0.088 Sum_probs=73.9
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHH--hh-hhhHHHHHhhhcccc
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEV--LA-KDVFNVLKEKWGTRL 79 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l--~~-~~~f~~l~~~~~~~~ 79 (570)
++-+++++|+|.|+ |-+|..++..|.+.| |.++.++.+..-..+-..|.. +++ .+ ..+-+++++.+|.
T Consensus 130 q~~l~~~~VlvvG~-GG~Gs~ia~~La~~G--vg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~-- 204 (376)
T PRK08762 130 QRRLLEARVLLIGA-GGLGSPAALYLAAAG--VGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPD-- 204 (376)
T ss_pred HHHHhcCcEEEECC-CHHHHHHHHHHHHcC--CCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCC--
Confidence 45678999999985 669999999999987 578888887632211111100 000 00 0011344444331
Q ss_pred ccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
-++..+...++ ... ...+++++|+||.+.... .. -..+-++|.+. + ..+|+
T Consensus 205 -----v~v~~~~~~~~-------~~~-~~~~~~~~D~Vv~~~d~~------~~--------r~~ln~~~~~~-~-ip~i~ 255 (376)
T PRK08762 205 -----VQVEAVQERVT-------SDN-VEALLQDVDVVVDGADNF------PT--------RYLLNDACVKL-G-KPLVY 255 (376)
T ss_pred -----CEEEEEeccCC-------hHH-HHHHHhCCCEEEECCCCH------HH--------HHHHHHHHHHc-C-CCEEE
Confidence 34555555555 333 346678999999986541 11 11245677774 3 57888
Q ss_pred Eecceeec
Q 008324 160 VSTAYVAG 167 (570)
Q Consensus 160 vSTa~v~~ 167 (570)
.++....|
T Consensus 256 ~~~~g~~g 263 (376)
T PRK08762 256 GAVFRFEG 263 (376)
T ss_pred EEeccCEE
Confidence 87654444
|
|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=94.14 E-value=0.31 Score=52.93 Aligned_cols=36 Identities=14% Similarity=0.169 Sum_probs=30.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
++||+|+|||++| +|...++.|++.| .+|++..+..
T Consensus 3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G---~~V~~~d~~~ 38 (447)
T PRK02472 3 YQNKKVLVLGLAK-SGYAAAKLLHKLG---ANVTVNDGKP 38 (447)
T ss_pred cCCCEEEEEeeCH-HHHHHHHHHHHCC---CEEEEEcCCC
Confidence 4689999999988 9999999999999 5667766543
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=94.12 E-value=1.3 Score=45.71 Aligned_cols=114 Identities=16% Similarity=0.150 Sum_probs=70.7
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|.|+ |.+|..++..|+..+. ..+|+++.|.+..... +..++-....+ ....+....+
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~-~~ei~l~D~~~~~~~~---~a~dL~~~~~~--------------~~~~~~i~~~ 61 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGI-ADELVLIDINEEKAEG---EALDLEDALAF--------------LPSPVKIKAG 61 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCcchhhH---hHhhHHHHhhc--------------cCCCeEEEcC
Confidence 47999995 9999999999998763 2478888886543222 12122111000 0112222211
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEE
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~v 160 (570)
| . ..+.++|+||.+++..+- .++-...++.|..-.+.+.+..++. +.+.++.+
T Consensus 62 ~----------~----~~l~~aDIVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~-~~~~~viv 115 (306)
T cd05291 62 D----------Y----SDCKDADIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKAS-GFDGIFLV 115 (306)
T ss_pred C----------H----HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEE
Confidence 1 1 224789999999997643 2344567899999999999998886 43444443
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=93.86 E-value=1.7 Score=47.05 Aligned_cols=121 Identities=8% Similarity=0.029 Sum_probs=70.4
Q ss_pred CEEEEECCcchhHHHHHHHHHHh---CCCcc-EEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 13 KTILVSGVTGFVAKVFIEKILRV---QPNVK-KLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~---~~~V~-~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
-+|+||||+|.||.+|+-.|.+- |++-. .+.++..+....... -..-||.... | | + ...+.
T Consensus 124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~-G~amDL~D~a-~-------p-----l-l~~v~ 188 (452)
T cd05295 124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLK-GLVMEVEDLA-F-------P-----L-LRGIS 188 (452)
T ss_pred eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHH-HHHHHHHHhH-H-------h-----h-cCCcE
Confidence 47999999999999999999761 22211 244444432221111 1111222211 0 0 0 12333
Q ss_pred EEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccC-ceEEEEEec
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVK-LKVFVHVST 162 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~-l~~~V~vST 162 (570)
+..+| .+.++++|+||-+||..+- .+.....++.|+.-.+.+.+...+... -.+++.+.|
T Consensus 189 i~~~~--------------~ea~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t 250 (452)
T cd05295 189 VTTDL--------------DVAFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR 250 (452)
T ss_pred EEECC--------------HHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 33211 2456899999999998643 345566799999999999998887633 134444443
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=93.77 E-value=0.36 Score=50.62 Aligned_cols=33 Identities=15% Similarity=0.384 Sum_probs=26.4
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEc
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR 47 (570)
++|+|.||||++|+.+++.|++. |++ ++.++.+
T Consensus 3 ~kVaIiGAtG~vG~~l~~~L~~~-p~~-elv~v~~ 35 (343)
T PRK00436 3 IKVGIVGASGYTGGELLRLLLNH-PEV-EIVAVTS 35 (343)
T ss_pred eEEEEECCCCHHHHHHHHHHHcC-CCc-eEEEEEC
Confidence 68999999999999999999864 554 5555555
|
|
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=93.73 E-value=1.5 Score=45.15 Aligned_cols=115 Identities=13% Similarity=0.110 Sum_probs=72.3
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccC-CceEEEec
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS-EKITFVPG 92 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~-~kv~~v~g 92 (570)
+|.|.|+ |.+|..++-.|+..+ -+..++++...+........ +|..... +.. .++....+
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~-~~~elvL~Di~~~~a~g~a~---DL~~~~~--------------~~~~~~~~i~~~ 61 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALG-LFSEIVLIDVNEGVAEGEAL---DFHHATA--------------LTYSTNTKIRAG 61 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCcchhhHHHH---HHHhhhc--------------cCCCCCEEEEEC
Confidence 5789997 999999999998754 34678888775433222111 2221111 111 23444333
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-ccc--HHHHHHHhHHHHHHHHHHHHHccCceEEEEEec
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DER--YDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~--~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vST 162 (570)
| . +.++++|+|+-+||..+- .++ -.+.+..|+.-.+.+.....+. +...++.+-|
T Consensus 62 ~-------------y-~~~~~aDivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~-~p~~i~ivvs 119 (307)
T cd05290 62 D-------------Y-DDCADADIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKV-TKEAVIILIT 119 (307)
T ss_pred C-------------H-HHhCCCCEEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEec
Confidence 3 1 345789999999998643 233 3566899999999999988886 4455554443
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1 | Back alignment and domain information |
|---|
Probab=93.68 E-value=0.87 Score=46.29 Aligned_cols=124 Identities=16% Similarity=0.180 Sum_probs=73.6
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHH---hhhhhHHHHHhhhcccc
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEV---LAKDVFNVLKEKWGTRL 79 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l---~~~~~f~~l~~~~~~~~ 79 (570)
++-+++.+|||.|+.| +|..+++.|...| |++|.+.....-..+-..|-. +++ -.....++|++-+|.
T Consensus 14 q~kL~~s~VLIvG~gG-LG~EiaKnLalaG--Vg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~-- 88 (286)
T cd01491 14 MKKLQKSNVLISGLGG-LGVEIAKNLILAG--VKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPY-- 88 (286)
T ss_pred HHHHhcCcEEEEcCCH-HHHHHHHHHHHcC--CCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCC--
Confidence 4567789999999655 9999999999877 577777665432211111100 000 011233556655542
Q ss_pred ccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
-+|..+.+++. + +.+.+.|+|+.+.. +++.... +-++|++. + ..||+
T Consensus 89 -----V~V~~~~~~~~--------~----~~l~~fdvVV~~~~------~~~~~~~--------in~~c~~~-~-ipfI~ 135 (286)
T cd01491 89 -----VPVTVSTGPLT--------T----DELLKFQVVVLTDA------SLEDQLK--------INEFCHSP-G-IKFIS 135 (286)
T ss_pred -----CEEEEEeccCC--------H----HHHhcCCEEEEecC------CHHHHHH--------HHHHHHHc-C-CEEEE
Confidence 45666666533 2 34578999998753 2333333 34677774 4 47898
Q ss_pred EecceeecC
Q 008324 160 VSTAYVAGE 168 (570)
Q Consensus 160 vSTa~v~~~ 168 (570)
..|...+|.
T Consensus 136 a~~~G~~G~ 144 (286)
T cd01491 136 ADTRGLFGS 144 (286)
T ss_pred EeccccEEE
Confidence 888766664
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1. |
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=93.57 E-value=0.15 Score=53.14 Aligned_cols=35 Identities=26% Similarity=0.300 Sum_probs=28.0
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEc
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR 47 (570)
.+|.|+||||++|+.|++.|.++++.+.++..+..
T Consensus 5 ~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s 39 (336)
T PRK05671 5 LDIAVVGATGTVGEALVQILEERDFPVGTLHLLAS 39 (336)
T ss_pred CEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEEC
Confidence 58999999999999999999976544456665543
|
|
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=93.55 E-value=1.4 Score=45.57 Aligned_cols=111 Identities=14% Similarity=0.085 Sum_probs=69.6
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe-
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP- 91 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~- 91 (570)
++|.|+|| |.+|..++-.|+..+ -...++++.+.++..... .+ ++.....| . ....+..
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~-~~~el~LiD~~~~~~~g~-a~--Dl~~~~~~--------------~-~~~~v~~~ 63 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKG-LADELVLVDVVEDKLKGE-AM--DLQHGSAF--------------L-KNPKIEAD 63 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCccHHHHH-HH--HHHHhhcc--------------C-CCCEEEEC
Confidence 58999996 999999999888764 346788887765322221 11 22211111 1 1112221
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEE
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V 158 (570)
+| . +.++++|+||-+|+..+- .++-...+..|..-.+.+.+..++. +.+.++
T Consensus 64 ~d------------y--~~~~~adivvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~-~p~~~v 116 (312)
T cd05293 64 KD------------Y--SVTANSKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKY-SPNAIL 116 (312)
T ss_pred CC------------H--HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCcEE
Confidence 22 1 225889999999997543 3345567899999999999988886 444433
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=93.42 E-value=0.52 Score=51.15 Aligned_cols=72 Identities=17% Similarity=0.266 Sum_probs=49.6
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+|.|+ |.+|+.+++.|.+.+ ..|+++.|++.. .+.+. + ...+..+.|
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g---~~v~vid~~~~~---~~~~~-------------~----------~~~~~~~~g 50 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGEN---NDVTVIDTDEER---LRRLQ-------------D----------RLDVRTVVG 50 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC---CcEEEEECCHHH---HHHHH-------------h----------hcCEEEEEe
Confidence 57999997 999999999999888 456677665432 11111 0 135778899
Q ss_pred cCCCCCCCCCchhhHHHH-hCCccEEEEcC
Q 008324 93 DISSEDLGLKDSNLKEEL-WNELDIMVNSA 121 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l-~~~vdiViH~A 121 (570)
|.+ +.+.++.+ ++++|+|+-+.
T Consensus 51 d~~-------~~~~l~~~~~~~a~~vi~~~ 73 (453)
T PRK09496 51 NGS-------SPDVLREAGAEDADLLIAVT 73 (453)
T ss_pred CCC-------CHHHHHHcCCCcCCEEEEec
Confidence 998 44444455 67899988664
|
|
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=93.41 E-value=1.1 Score=46.30 Aligned_cols=112 Identities=20% Similarity=0.179 Sum_probs=68.6
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
+|.|+||+|.+|..++-.|+..+ -+..+.++.+.+....+. +|... ....++....+|
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~-~~~elvL~Di~~a~g~a~-----DL~~~----------------~~~~~i~~~~~~ 58 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQP-YVSELSLYDIAGAAGVAA-----DLSHI----------------PTAASVKGFSGE 58 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCC-CCcEEEEecCCCCcEEEc-----hhhcC----------------CcCceEEEecCC
Confidence 58999999999999999887754 445777777655111110 11000 000111111111
Q ss_pred CCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 94 ISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 94 l~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
.+. .+.++++|+||-+||..+- .......+..|+.-.+.+.+...+. +.+.++.
T Consensus 59 ----------~~~-~~~~~daDivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~-~p~~iii 113 (312)
T TIGR01772 59 ----------EGL-ENALKGADVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAES-CPKAMIL 113 (312)
T ss_pred ----------Cch-HHHcCCCCEEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHh-CCCeEEE
Confidence 111 2566899999999997543 3445567899999999999888776 4444433
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=93.34 E-value=2 Score=41.73 Aligned_cols=129 Identities=21% Similarity=0.125 Sum_probs=73.6
Q ss_pred HHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHH---HHHHhh---hhhHHHHHhhhcccc
Q 008324 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF---QNEVLA---KDVFNVLKEKWGTRL 79 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl---~~~l~~---~~~f~~l~~~~~~~~ 79 (570)
.++-+++++|+|.|+ |-+|..+++.|.+.| |.++.+.....-..+-..|. .+++-+ ...-+++++.+|
T Consensus 22 ~q~~L~~~~V~ViG~-GglGs~ia~~La~~G--vg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp--- 95 (212)
T PRK08644 22 LLEKLKKAKVGIAGA-GGLGSNIAVALARSG--VGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINP--- 95 (212)
T ss_pred HHHHHhCCCEEEECc-CHHHHHHHHHHHHcC--CCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCC---
Confidence 456688899999995 679999999999976 57888887763221111111 000000 011123333333
Q ss_pred ccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
.-+++.+...++ +++ ..++++++|+||.|.- +.+ ....+.+.|.+.. -..+|+
T Consensus 96 ----~v~v~~~~~~i~-------~~~-~~~~~~~~DvVI~a~D------~~~--------~r~~l~~~~~~~~-~~p~I~ 148 (212)
T PRK08644 96 ----FVEIEAHNEKID-------EDN-IEELFKDCDIVVEAFD------NAE--------TKAMLVETVLEHP-GKKLVA 148 (212)
T ss_pred ----CCEEEEEeeecC-------HHH-HHHHHcCCCEEEECCC------CHH--------HHHHHHHHHHHhC-CCCEEE
Confidence 145667777666 333 3467789999998832 222 1223455666631 256777
Q ss_pred Eecceeec
Q 008324 160 VSTAYVAG 167 (570)
Q Consensus 160 vSTa~v~~ 167 (570)
.|...-++
T Consensus 149 ~~~~~~~~ 156 (212)
T PRK08644 149 ASGMAGYG 156 (212)
T ss_pred eehhhccC
Confidence 76543333
|
|
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=93.32 E-value=0.64 Score=53.28 Aligned_cols=124 Identities=15% Similarity=0.061 Sum_probs=76.3
Q ss_pred HHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH---HHHhh--h-hhHHHHHhhhcccc
Q 008324 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ---NEVLA--K-DVFNVLKEKWGTRL 79 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~---~~l~~--~-~~f~~l~~~~~~~~ 79 (570)
-++-+++++|+|.|+ | +|..+++.|.+.| -|+++.+.....=..+-..|.. .++-. . ..-+++++.+|
T Consensus 101 ~Q~~L~~~~V~IvG~-G-lGs~~a~~LaraG-vvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp--- 174 (722)
T PRK07877 101 EQERLGRLRIGVVGL-S-VGHAIAHTLAAEG-LCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDP--- 174 (722)
T ss_pred HHHHHhcCCEEEEEe-c-HHHHHHHHHHHcc-CCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCC---
Confidence 466788999999999 8 9999999999987 1277888776654444444420 01100 0 01123444443
Q ss_pred ccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
.-+|+.+...++ .+. .+.+++++|+|+.|.=. ++ .-..+-+.|.+. + ..+|+
T Consensus 175 ----~i~v~~~~~~i~-------~~n-~~~~l~~~DlVvD~~D~------~~--------~R~~ln~~a~~~-~-iP~i~ 226 (722)
T PRK07877 175 ----YLPVEVFTDGLT-------EDN-VDAFLDGLDVVVEECDS------LD--------VKVLLREAARAR-R-IPVLM 226 (722)
T ss_pred ----CCEEEEEeccCC-------HHH-HHHHhcCCCEEEECCCC------HH--------HHHHHHHHHHHc-C-CCEEE
Confidence 247778888887 444 45788999999998532 21 111234566664 3 45777
Q ss_pred Eecc
Q 008324 160 VSTA 163 (570)
Q Consensus 160 vSTa 163 (570)
-|++
T Consensus 227 ~~~~ 230 (722)
T PRK07877 227 ATSD 230 (722)
T ss_pred EcCC
Confidence 6643
|
|
| >COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.28 E-value=0.15 Score=52.47 Aligned_cols=38 Identities=26% Similarity=0.343 Sum_probs=32.4
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
+++|.|.||||-+|+.+++.|.++.+.+..+.++...+
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~r 38 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASAR 38 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEeccc
Confidence 36899999999999999999999888888777776544
|
|
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=93.07 E-value=0.29 Score=53.16 Aligned_cols=34 Identities=12% Similarity=0.176 Sum_probs=28.7
Q ss_pred cCCCEEEEECC----------------cchhHHHHHHHHHHhCCCccEEEEEE
Q 008324 10 LENKTILVSGV----------------TGFVAKVFIEKILRVQPNVKKLYLFV 46 (570)
Q Consensus 10 ~~~k~VlITGa----------------TGFlG~~LvekLl~~~~~V~~V~~lv 46 (570)
++||+||||+| ||-+|.+|++.+...|.+ |+++.
T Consensus 254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~---VtlI~ 303 (475)
T PRK13982 254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAE---VTLIS 303 (475)
T ss_pred cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCc---EEEEe
Confidence 78999999985 789999999999999954 45544
|
|
| >PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=93.01 E-value=0.81 Score=53.28 Aligned_cols=75 Identities=17% Similarity=0.250 Sum_probs=49.9
Q ss_pred HHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHH-HHHhhCCC-----CCCceEEecCCCCCcccHHHHHHHHhhhccc
Q 008324 281 FVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA-MVAHAKQP-----SDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 281 i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a-~~~~~~~~-----~~~~iyni~s~~~~pit~~~l~~~i~~~~~~ 354 (570)
-.+.+.|.++.++..-....-++|+|...++-+.+ ++.-.+.. .....--|+.+.++.+-|+-+.+.+..|+|+
T Consensus 237 ~~~~a~g~~~~~p~~~~~p~~~~p~d~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vwgm~~~ylm~yy~r 316 (1108)
T PTZ00374 237 CLGVALGTVKHLPVGFRDPATVTPLDVALNTALLAVLLLCHGGLAECVECAAEMQLCGAPGDNSLVWGMVAEYLMDYYGR 316 (1108)
T ss_pred HHHHhhhhhhcccccCCCCceeccHHHHHHHHHHHHHHHhcCChHHHhcchhhheeccCCccceeeHHHHHHHHHHHHhh
Confidence 34667788888887766677899999887765432 33211111 0112333566566899999999999999886
Q ss_pred C
Q 008324 355 K 355 (570)
Q Consensus 355 ~ 355 (570)
.
T Consensus 317 ~ 317 (1108)
T PTZ00374 317 F 317 (1108)
T ss_pred h
Confidence 4
|
|
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=92.80 E-value=3.1 Score=43.72 Aligned_cols=111 Identities=14% Similarity=0.109 Sum_probs=69.2
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|+|+ |.+|..++-.|+..+ -...++++...+........ ++.....| .... -|.+
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~-l~~el~LiDi~~~~~~g~a~---DL~~~~~~---------------~~~~-~i~~ 96 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQD-LADELALVDVNPDKLRGEML---DLQHAAAF---------------LPRT-KILA 96 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-CCCEEEEEeCCCchhhHHHH---HHHhhhhc---------------CCCC-EEEe
Confidence 69999996 999999999888754 34578888776543222111 22211111 1222 2222
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEE
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVF 157 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~ 157 (570)
+ .+ . +.++++|+||-+||..+- .++-.+.+..|+.-.+.+.+..++. +.+.+
T Consensus 97 ~----------~d-y-~~~~daDiVVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~-~p~~i 149 (350)
T PLN02602 97 S----------TD-Y-AVTAGSDLCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKY-SPDTI 149 (350)
T ss_pred C----------CC-H-HHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeE
Confidence 1 11 1 235899999999997542 3344566889999999998888875 33333
|
|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=92.70 E-value=3.1 Score=40.01 Aligned_cols=98 Identities=19% Similarity=0.234 Sum_probs=59.3
Q ss_pred cHHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHH--H-HHHhh--hh-hHHHHHhhhccc
Q 008324 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF--Q-NEVLA--KD-VFNVLKEKWGTR 78 (570)
Q Consensus 5 ~i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl--~-~~l~~--~~-~f~~l~~~~~~~ 78 (570)
..++-++.++|+|.|+ |-+|..++..|.+.| |.++++..++.-..+-..|. . +++-+ .. .=+++++.+|
T Consensus 14 ~~q~~L~~~~V~IvG~-GglGs~ia~~La~~G--vg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp-- 88 (200)
T TIGR02354 14 KIVQKLEQATVAICGL-GGLGSNVAINLARAG--IGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINP-- 88 (200)
T ss_pred HHHHHHhCCcEEEECc-CHHHHHHHHHHHHcC--CCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCC--
Confidence 3567788999999996 669999999999987 46788877762111111110 0 01100 00 1123333333
Q ss_pred cccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEc
Q 008324 79 LNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120 (570)
Q Consensus 79 ~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~ 120 (570)
.-++..+..+++ .+. ...+++++|+||-+
T Consensus 89 -----~~~i~~~~~~i~-------~~~-~~~~~~~~DlVi~a 117 (200)
T TIGR02354 89 -----YTEIEAYDEKIT-------EEN-IDKFFKDADIVCEA 117 (200)
T ss_pred -----CCEEEEeeeeCC-------HhH-HHHHhcCCCEEEEC
Confidence 135667777776 333 34677899999987
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=92.51 E-value=0.63 Score=41.05 Aligned_cols=36 Identities=19% Similarity=0.299 Sum_probs=28.2
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
++|.|.|++|-+|+.+++.+++. +++.-+.++.|+.
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~-~~~~lv~~v~~~~ 36 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILES-PGFELVGAVDRKP 36 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS-TTEEEEEEEETTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhc-CCcEEEEEEecCC
Confidence 47999999999999999999983 4544455666665
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.44 E-value=0.31 Score=50.72 Aligned_cols=37 Identities=30% Similarity=0.384 Sum_probs=29.0
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEc
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR 47 (570)
++.+|.|.||||++|..|++-|.++.+.+.++..+..
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS 39 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALAS 39 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEc
Confidence 4678999999999999999988876433456666644
|
|
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=92.39 E-value=1.6 Score=46.17 Aligned_cols=127 Identities=18% Similarity=0.157 Sum_probs=75.5
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHHhh---hhhHHHHHhhhcccc
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEVLA---KDVFNVLKEKWGTRL 79 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l~~---~~~f~~l~~~~~~~~ 79 (570)
++-+++.+|+|.|+ |-+|..++..|.+.| |+++.++....-..+-..|-. +++=. ...-++|++.+|.
T Consensus 36 q~~l~~~~VliiG~-GglG~~v~~~La~~G--vg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~-- 110 (370)
T PRK05600 36 QERLHNARVLVIGA-GGLGCPAMQSLASAG--VGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPD-- 110 (370)
T ss_pred HHHhcCCcEEEECC-CHHHHHHHHHHHHcC--CCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCC--
Confidence 56678899999996 569999999999976 578888777642222222210 01100 1112344444431
Q ss_pred ccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
-+++.+...++ ... ...+++++|+||.|... ++. -..+-++|.+. + ..+|+
T Consensus 111 -----v~i~~~~~~i~-------~~~-~~~~~~~~DlVid~~Dn------~~~--------r~~in~~~~~~-~-iP~v~ 161 (370)
T PRK05600 111 -----IRVNALRERLT-------AEN-AVELLNGVDLVLDGSDS------FAT--------KFLVADAAEIT-G-TPLVW 161 (370)
T ss_pred -----CeeEEeeeecC-------HHH-HHHHHhCCCEEEECCCC------HHH--------HHHHHHHHHHc-C-CCEEE
Confidence 35667776666 333 34678899999988643 221 11234566664 4 46888
Q ss_pred Eecceeec
Q 008324 160 VSTAYVAG 167 (570)
Q Consensus 160 vSTa~v~~ 167 (570)
.+....+|
T Consensus 162 ~~~~g~~G 169 (370)
T PRK05600 162 GTVLRFHG 169 (370)
T ss_pred EEEecCEE
Confidence 77755444
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=92.27 E-value=3.5 Score=37.07 Aligned_cols=120 Identities=18% Similarity=0.160 Sum_probs=68.4
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHHh--h-hhhHHHHHhhhccccccccCCc
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEVL--A-KDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l~--~-~~~f~~l~~~~~~~~~~~~~~k 86 (570)
+|+|.|+ |-+|..+++.|.+.| ++++.++....-..+-..|.. +++= + ..+-+++++..| .-+
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~G--v~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p-------~v~ 70 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSG--VGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNP-------GVN 70 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCC--CCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCC-------CcE
Confidence 5899996 789999999999987 467777765432211111110 0000 0 001133343333 235
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceee
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~ 166 (570)
+..+..++. .... ...+++.|+||.+... ++ ....+-++|++. + ..+|.+++....
T Consensus 71 i~~~~~~~~-------~~~~-~~~~~~~diVi~~~d~------~~--------~~~~l~~~~~~~-~-i~~i~~~~~g~~ 126 (143)
T cd01483 71 VTAVPEGIS-------EDNL-DDFLDGVDLVIDAIDN------IA--------VRRALNRACKEL-G-IPVIDAGGLGLG 126 (143)
T ss_pred EEEEeeecC-------hhhH-HHHhcCCCEEEECCCC------HH--------HHHHHHHHHHHc-C-CCEEEEcCCCcE
Confidence 666666665 2222 3667899999988654 11 233456778775 3 467887776544
Q ss_pred c
Q 008324 167 G 167 (570)
Q Consensus 167 ~ 167 (570)
|
T Consensus 127 g 127 (143)
T cd01483 127 G 127 (143)
T ss_pred E
Confidence 4
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=92.26 E-value=0.48 Score=44.29 Aligned_cols=35 Identities=20% Similarity=0.298 Sum_probs=29.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEc
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR 47 (570)
++|++|+|.|+++.+|..++..|.+.+ .+|++..|
T Consensus 42 l~gk~vlViG~G~~~G~~~a~~L~~~g---~~V~v~~r 76 (168)
T cd01080 42 LAGKKVVVVGRSNIVGKPLAALLLNRN---ATVTVCHS 76 (168)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhhCC---CEEEEEEC
Confidence 579999999997788999999999877 35666655
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PRK14851 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=92.11 E-value=0.92 Score=51.78 Aligned_cols=125 Identities=14% Similarity=0.139 Sum_probs=73.2
Q ss_pred HHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHH--hhhh-hHHHHHhhhccc
Q 008324 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEV--LAKD-VFNVLKEKWGTR 78 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l--~~~~-~f~~l~~~~~~~ 78 (570)
-++-+++++|+|.|+ |-+|..+++.|.+.| |+++.++....-..+-..|.. +++ .+.. .-+++++.+|
T Consensus 37 ~Q~kL~~~~VlIvG~-GGlGs~va~~Lar~G--VG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP-- 111 (679)
T PRK14851 37 EQERLAEAKVAIPGM-GGVGGVHLITMVRTG--IGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINP-- 111 (679)
T ss_pred HHHHHhcCeEEEECc-CHHHHHHHHHHHHhC--CCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCC--
Confidence 466788999999994 669999999999987 577777655432222222200 011 0000 1134444444
Q ss_pred cccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEE
Q 008324 79 LNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 79 ~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V 158 (570)
.-+|+.+...++ .++. ..+++++|+||.+.-... .+ .-..+.+.|.+. ++ .+|
T Consensus 112 -----~~~I~~~~~~i~-------~~n~-~~~l~~~DvVid~~D~~~----~~--------~r~~l~~~c~~~-~i-P~i 164 (679)
T PRK14851 112 -----FLEITPFPAGIN-------ADNM-DAFLDGVDVVLDGLDFFQ----FE--------IRRTLFNMAREK-GI-PVI 164 (679)
T ss_pred -----CCeEEEEecCCC-------hHHH-HHHHhCCCEEEECCCCCc----HH--------HHHHHHHHHHHC-CC-CEE
Confidence 257778888887 4443 477889999997652211 11 112355677774 43 466
Q ss_pred EEec
Q 008324 159 HVST 162 (570)
Q Consensus 159 ~vST 162 (570)
+.+.
T Consensus 165 ~~g~ 168 (679)
T PRK14851 165 TAGP 168 (679)
T ss_pred Eeec
Confidence 6553
|
|
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.05 E-value=0.33 Score=50.65 Aligned_cols=37 Identities=24% Similarity=0.347 Sum_probs=28.6
Q ss_pred CCEEEEECCcchhHHHHHHHHHH-hCCCccEEEEEEcC
Q 008324 12 NKTILVSGVTGFVAKVFIEKILR-VQPNVKKLYLFVRA 48 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~-~~~~V~~V~~lvR~ 48 (570)
+.+|.|.||||++|+.+++-|.+ ...++.++.++...
T Consensus 5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~ 42 (347)
T PRK06728 5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSK 42 (347)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECc
Confidence 46899999999999999998884 44455566666543
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=91.85 E-value=0.38 Score=48.80 Aligned_cols=38 Identities=29% Similarity=0.465 Sum_probs=32.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~ 50 (570)
.++++|+|+|+ |.+|+.++..|...| +.+|++..|+..
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g--~~~V~v~~R~~~ 158 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLG--VAEITIVNRTVE 158 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcC--CCEEEEEeCCHH
Confidence 56899999996 999999999999876 368899999753
|
|
| >KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=91.56 E-value=1.4 Score=43.97 Aligned_cols=116 Identities=22% Similarity=0.238 Sum_probs=74.6
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEE-cCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV-RAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lv-R~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+-+|.|.||.|-||+-|.- |++.+|.|....+-. +...+.
T Consensus 28 ~~KVAvlGAaGGIGQPLSL-LlK~np~Vs~LaLYDi~~~~GV-------------------------------------- 68 (345)
T KOG1494|consen 28 GLKVAVLGAAGGIGQPLSL-LLKLNPLVSELALYDIANTPGV-------------------------------------- 68 (345)
T ss_pred cceEEEEecCCccCccHHH-HHhcCcccceeeeeecccCCcc--------------------------------------
Confidence 4689999999999998765 455678776654432 122222
Q ss_pred eccCCCC-----CCCCCchhhHHHHhCCccEEEEcCccCCcc-ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecce
Q 008324 91 PGDISSE-----DLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (570)
Q Consensus 91 ~gDl~~~-----~lgls~~~~~~~l~~~vdiViH~AA~v~f~-~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~ 164 (570)
..|++.- -.|...++.++..+++.|+|+-=||..+-. -.-++.+.+|..-.+.|..++.++ -.+..|.+=|--
T Consensus 69 aaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~-cP~A~i~vIsNP 147 (345)
T KOG1494|consen 69 AADLSHINTNSSVVGFTGADGLENALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKC-CPNALILVISNP 147 (345)
T ss_pred cccccccCCCCceeccCChhHHHHHhcCCCEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhh-CccceeEeecCc
Confidence 1222111 112223344568889999999999987642 234677999999999999988876 334556555444
Q ss_pred eec
Q 008324 165 VAG 167 (570)
Q Consensus 165 v~~ 167 (570)
||.
T Consensus 148 VNs 150 (345)
T KOG1494|consen 148 VNS 150 (345)
T ss_pred ccc
Confidence 443
|
|
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=91.41 E-value=2.5 Score=42.38 Aligned_cols=107 Identities=14% Similarity=0.079 Sum_probs=65.6
Q ss_pred EEEECCcchhHHHHHHHHHHhCC-CccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 008324 15 ILVSGVTGFVAKVFIEKILRVQP-NVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (570)
Q Consensus 15 VlITGaTGFlG~~LvekLl~~~~-~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
|.|.||+|.+|..++..|+..+. .+.+|++..+.+...... ..++-.. ... ....++. .
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~---~~dl~~~------~~~-------~~~~~i~--~-- 60 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGV---AMDLQDA------VEP-------LADIKVS--I-- 60 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHH---HHHHHHh------hhh-------ccCcEEE--E--
Confidence 57999999999999999987651 345788887766332221 1111000 000 0001111 1
Q ss_pred CCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc-ccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 94 ISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 94 l~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~-~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
+ .| ..+.++++|+|+-+|+..+.. ..-......|+.-.+.+.+..++.
T Consensus 61 -~--------~d-~~~~~~~aDiVv~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~ 109 (263)
T cd00650 61 -T--------DD-PYEAFKDADVVIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKY 109 (263)
T ss_pred -C--------Cc-hHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 11 135568999999999876543 234456788999999998888875
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=91.30 E-value=5.3 Score=41.15 Aligned_cols=114 Identities=13% Similarity=0.106 Sum_probs=69.2
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|.|+ |.+|..++..|+..+. +..|.++.|++....... . ++.... .+ ........+
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~-~~ev~l~D~~~~~~~g~a--~-dl~~~~--------------~~-~~~~~i~~~ 60 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGL-ASEIVLVDINKAKAEGEA--M-DLAHGT--------------PF-VKPVRIYAG 60 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCC-CCEEEEEECCchhhhhHH--H-HHHccc--------------cc-cCCeEEeeC
Confidence 47999997 9999999999998763 357888887653321110 0 111100 00 011111111
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEe
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vS 161 (570)
+. +.++++|+||-+|+...- ..+.......|+.-.+.+.+..++. +.+.++.+-
T Consensus 61 ------------d~--~~l~~aDiViita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~-~~~giiiv~ 115 (308)
T cd05292 61 ------------DY--ADCKGADVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKY-APDAILLVV 115 (308)
T ss_pred ------------CH--HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEe
Confidence 11 235899999999987532 3345566888999999988888775 334444443
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=91.28 E-value=1.9 Score=44.51 Aligned_cols=122 Identities=14% Similarity=0.134 Sum_probs=71.2
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHH---hhhhhHHHHHhhhccccccccCCc
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEV---LAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l---~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
+|||.|+ |-+|..+++.|...| |+++.++....-..+-..|.. +++ -....-+++++.+|. -+
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~G--vg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~-------v~ 70 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTG--FGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPN-------VK 70 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhc--CCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCC-------Ce
Confidence 5899996 779999999999987 588888765542222111110 000 001112444444442 46
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceee
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~ 166 (570)
|..+.+++++. +.....+++.|+|+.+... .+ .-..+-++|.+. + ..||..+|....
T Consensus 71 V~~~~~~i~~~-------~~~~~f~~~~DvVv~a~Dn------~~--------ar~~in~~c~~~-~-ip~I~~gt~G~~ 127 (312)
T cd01489 71 IVAYHANIKDP-------DFNVEFFKQFDLVFNALDN------LA--------ARRHVNKMCLAA-D-VPLIESGTTGFL 127 (312)
T ss_pred EEEEeccCCCc-------cchHHHHhcCCEEEECCCC------HH--------HHHHHHHHHHHC-C-CCEEEEecCcce
Confidence 77788888742 2123567889999987532 22 223345666664 3 568888776655
Q ss_pred cC
Q 008324 167 GE 168 (570)
Q Consensus 167 ~~ 168 (570)
|.
T Consensus 128 G~ 129 (312)
T cd01489 128 GQ 129 (312)
T ss_pred eE
Confidence 54
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >PRK14852 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=91.22 E-value=1.3 Score=52.10 Aligned_cols=126 Identities=13% Similarity=0.060 Sum_probs=74.4
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHHhh---hhhHHHHHhhhcccc
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEVLA---KDVFNVLKEKWGTRL 79 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l~~---~~~f~~l~~~~~~~~ 79 (570)
|+-+++.+|+|.|+ |-+|..+++.|.+.| |+++.++.-..-..+-..|-. +++=+ ...-+++++-+|.
T Consensus 327 Q~kL~~srVlVvGl-GGlGs~ia~~LAraG--VG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~-- 401 (989)
T PRK14852 327 QRRLLRSRVAIAGL-GGVGGIHLMTLARTG--IGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPF-- 401 (989)
T ss_pred HHHHhcCcEEEECC-cHHHHHHHHHHHHcC--CCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCC--
Confidence 56788999999995 559999999999987 578877765443222222200 01100 0112344444442
Q ss_pred ccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
-+|+++...++ .+. .+.+++++|+||.+.-...+ + ..+.+.+.|.+. + ..+|+
T Consensus 402 -----v~I~~~~~~I~-------~en-~~~fl~~~DiVVDa~D~~~~----~--------~rr~l~~~c~~~-~-IP~I~ 454 (989)
T PRK14852 402 -----LDIRSFPEGVA-------AET-IDAFLKDVDLLVDGIDFFAL----D--------IRRRLFNRALEL-G-IPVIT 454 (989)
T ss_pred -----CeEEEEecCCC-------HHH-HHHHhhCCCEEEECCCCccH----H--------HHHHHHHHHHHc-C-CCEEE
Confidence 46777777776 333 35778999999976432111 1 123455667664 4 45777
Q ss_pred Eecce
Q 008324 160 VSTAY 164 (570)
Q Consensus 160 vSTa~ 164 (570)
.++..
T Consensus 455 ag~~G 459 (989)
T PRK14852 455 AGPLG 459 (989)
T ss_pred eeccc
Confidence 76643
|
|
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=91.16 E-value=0.71 Score=46.28 Aligned_cols=35 Identities=17% Similarity=0.295 Sum_probs=25.3
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcC
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~ 48 (570)
++|.|+|++|.+|+.+++.+.+ .+++.-+.+..+.
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~-~~~~elvav~d~~ 36 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEA-AEDLELVAAVDRP 36 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHh-CCCCEEEEEEecC
Confidence 5899999999999999987765 3554434444443
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=91.11 E-value=0.63 Score=47.32 Aligned_cols=35 Identities=17% Similarity=0.256 Sum_probs=29.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEc
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR 47 (570)
++||+|+|.|++|.+|+.++..|++.+ .+|++.-|
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~g---atVtv~~~ 191 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNAN---ATVTICHS 191 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCC---CEEEEEeC
Confidence 579999999999999999999999887 35555433
|
|
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=90.69 E-value=3.5 Score=42.73 Aligned_cols=118 Identities=17% Similarity=0.235 Sum_probs=70.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.+.++|.|.|| |.+|..++..|+..+ +..|.++.+++...... .+. + .+.. ........
T Consensus 3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~--~~~l~L~Di~~~~~~g~-~lD--l-----------~~~~---~~~~~~~~- 61 (319)
T PTZ00117 3 VKRKKISMIGA-GQIGSTVALLILQKN--LGDVVLYDVIKGVPQGK-ALD--L-----------KHFS---TLVGSNIN- 61 (319)
T ss_pred CCCcEEEEECC-CHHHHHHHHHHHHCC--CCeEEEEECCCccchhH-HHH--H-----------hhhc---cccCCCeE-
Confidence 35679999997 999999998887765 35677887765443221 111 1 0000 00001111
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceE-EEEEe
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKV-FVHVS 161 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~-~V~vS 161 (570)
+.+ + .+ .+ .++++|+|+-+|+..+. .......+..|..-.+.+.+...+. ..+. ++.+|
T Consensus 62 i~~--~--------~d-~~-~l~~ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~-~p~a~vivvs 122 (319)
T PTZ00117 62 ILG--T--------NN-YE-DIKDSDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKY-CPNAFVICVT 122 (319)
T ss_pred EEe--C--------CC-HH-HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence 111 0 12 22 45899999999987543 2345566888988888887777775 3344 44443
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=90.61 E-value=3.4 Score=35.44 Aligned_cols=70 Identities=16% Similarity=0.241 Sum_probs=45.2
Q ss_pred EEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccC
Q 008324 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (570)
Q Consensus 15 VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl 94 (570)
|+|.|. |-+|+.+++.|.+.+ ..|.++.+++... +.+. ...+.++.||.
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~---~~vvvid~d~~~~---~~~~------------------------~~~~~~i~gd~ 49 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGG---IDVVVIDRDPERV---EELR------------------------EEGVEVIYGDA 49 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTT---SEEEEEESSHHHH---HHHH------------------------HTTSEEEES-T
T ss_pred eEEEcC-CHHHHHHHHHHHhCC---CEEEEEECCcHHH---HHHH------------------------hcccccccccc
Confidence 578885 679999999999955 5777777754321 1111 14477999999
Q ss_pred CCCCCCCCchhhHHH-HhCCccEEEEcCc
Q 008324 95 SSEDLGLKDSNLKEE-LWNELDIMVNSAA 122 (570)
Q Consensus 95 ~~~~lgls~~~~~~~-l~~~vdiViH~AA 122 (570)
+ +++.++. -+++++.|+-+..
T Consensus 50 ~-------~~~~l~~a~i~~a~~vv~~~~ 71 (116)
T PF02254_consen 50 T-------DPEVLERAGIEKADAVVILTD 71 (116)
T ss_dssp T-------SHHHHHHTTGGCESEEEEESS
T ss_pred h-------hhhHHhhcCccccCEEEEccC
Confidence 9 4444433 3467888886543
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PRK06153 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=90.55 E-value=2.9 Score=44.20 Aligned_cols=125 Identities=15% Similarity=0.253 Sum_probs=69.6
Q ss_pred HHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH-----HHHhh-hhhHHHHHhhhcccc
Q 008324 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ-----NEVLA-KDVFNVLKEKWGTRL 79 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~-----~~l~~-~~~f~~l~~~~~~~~ 79 (570)
+++-+++++|+|.|+ |-+|+.+++.|.+.| |.++.++....=..+-..|.. +++-+ .+--+.++++...
T Consensus 170 ~q~kL~~~~VaIVG~-GG~GS~Va~~LAR~G--VgeI~LVD~D~Ve~SNLnRQ~gaf~~~DvGk~~~KVevaa~rl~~-- 244 (393)
T PRK06153 170 LSAKLEGQRIAIIGL-GGTGSYILDLVAKTP--VREIHLFDGDDFLQHNAFRSPGAASIEELREAPKKVDYFKSRYSN-- 244 (393)
T ss_pred HHHHHhhCcEEEEcC-CccHHHHHHHHHHcC--CCEEEEECCCEecccccccccccCCHhHcCCcchHHHHHHHHHHH--
Confidence 477889999999996 559999999999987 678887765432221111210 01100 0011112222111
Q ss_pred ccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
+..++.++...++ .+. . ..+.++|+||-|.- |..+-..+.++|.+. + ..+|+
T Consensus 245 ---in~~I~~~~~~I~-------~~n-~-~~L~~~DiV~dcvD--------------n~~aR~~ln~~a~~~-g-IP~Id 296 (393)
T PRK06153 245 ---MRRGIVPHPEYID-------EDN-V-DELDGFTFVFVCVD--------------KGSSRKLIVDYLEAL-G-IPFID 296 (393)
T ss_pred ---hCCeEEEEeecCC-------HHH-H-HHhcCCCEEEEcCC--------------CHHHHHHHHHHHHHc-C-CCEEE
Confidence 1235666666654 332 2 35688999999864 222223455666664 3 35676
Q ss_pred Eecc
Q 008324 160 VSTA 163 (570)
Q Consensus 160 vSTa 163 (570)
++-.
T Consensus 297 ~G~~ 300 (393)
T PRK06153 297 VGMG 300 (393)
T ss_pred eeec
Confidence 6643
|
|
| >TIGR01408 Ube1 ubiquitin-activating enzyme E1 | Back alignment and domain information |
|---|
Probab=90.45 E-value=2.1 Score=51.05 Aligned_cols=125 Identities=14% Similarity=0.159 Sum_probs=71.8
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHH---hhhhhHHHHHhhhcccc
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEV---LAKDVFNVLKEKWGTRL 79 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l---~~~~~f~~l~~~~~~~~ 79 (570)
++-++..+|||.|++| ||..++..|...| |++|.+..-..-..+-..|-. +++ -....-++|++-+|.
T Consensus 19 q~kL~~s~VLIiG~gG-LG~EiaKnL~laG--Vg~iti~D~d~v~~sdL~rQf~~~~~dIGk~Kaea~~~~L~eLNp~-- 93 (1008)
T TIGR01408 19 MQKMAKSNVLISGMGG-LGLEIAKNLVLAG--VKSVTLHDTEKCQAWDLSSNFFLSEDDVGRNRAEAVVKKLAELNPY-- 93 (1008)
T ss_pred HHHHhhCcEEEECCCH-HHHHHHHHHHHcC--CCeEEEEeCCeecHhhCCCceecchHHcCchHHHHHHHHHHHHCCC--
Confidence 4557788999999755 9999999999877 688887765431111100000 000 001123455555442
Q ss_pred ccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
-+|.++.++++ ++++++.|+|+-+-. ++...+ .+-++|++......||+
T Consensus 94 -----V~V~~~~~~l~------------~e~l~~fdvVV~t~~------~~~~~~--------~in~~cr~~~~~I~fI~ 142 (1008)
T TIGR01408 94 -----VHVSSSSVPFN------------EEFLDKFQCVVLTEM------SLPLQK--------EINDFCHSQCPPIAFIS 142 (1008)
T ss_pred -----ceEEEecccCC------------HHHHcCCCEEEECCC------CHHHHH--------HHHHHHHHcCCCeEEEE
Confidence 35666665554 235688999998632 333333 34478888622246888
Q ss_pred Eecceeec
Q 008324 160 VSTAYVAG 167 (570)
Q Consensus 160 vSTa~v~~ 167 (570)
.++...+|
T Consensus 143 ~~~~G~~G 150 (1008)
T TIGR01408 143 ADVRGLFG 150 (1008)
T ss_pred EeecceEE
Confidence 77654443
|
This model represents the full length, over a thousand amino acids, of a multicopy family of eukaryotic proteins, many of which are designated ubiquitin-activating enzyme E1. Members have two copies of the ThiF family domain (pfam00899), a repeat found in ubiquitin-activating proteins (pfam02134), and other regions. |
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=90.44 E-value=0.69 Score=48.51 Aligned_cols=41 Identities=17% Similarity=0.105 Sum_probs=29.1
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcc
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~ 52 (570)
.-+|+.|||.||+|-+|+..+.-....+ + ..++.++++++.
T Consensus 155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~--~-~~v~t~~s~e~~ 195 (347)
T KOG1198|consen 155 LSKGKSVLVLGGSGGVGTAAIQLAKHAG--A-IKVVTACSKEKL 195 (347)
T ss_pred cCCCCeEEEEeCCcHHHHHHHHHHHhcC--C-cEEEEEcccchH
Confidence 3468899999999999999887665544 2 345556665543
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=90.29 E-value=0.91 Score=46.09 Aligned_cols=33 Identities=21% Similarity=0.332 Sum_probs=28.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF 45 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~l 45 (570)
++||+|+|.|+++.+|+.++..|++.+ .+|+++
T Consensus 156 l~Gk~vvVIGrs~~VG~pla~lL~~~g---atVtv~ 188 (286)
T PRK14175 156 LEGKNAVVIGRSHIVGQPVSKLLLQKN---ASVTIL 188 (286)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCC---CeEEEE
Confidence 679999999999999999999999887 445544
|
|
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=90.29 E-value=2.9 Score=41.25 Aligned_cols=123 Identities=10% Similarity=0.119 Sum_probs=72.5
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHH--hh-hhhHHHHHhhhccccccccCCc
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEV--LA-KDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l--~~-~~~f~~l~~~~~~~~~~~~~~k 86 (570)
+|+|.| .|-+|..+++.|.+.| |+++.++....-..+-..|-. +++ .+ ...-+++++.+|. -+
T Consensus 1 kVlvvG-~GGlG~eilk~La~~G--vg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~-------v~ 70 (234)
T cd01484 1 KVLLVG-AGGIGCELLKNLALMG--FGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPN-------CK 70 (234)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcC--CCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCC-------CE
Confidence 588998 5669999999999976 588888777543332222210 000 00 1112445555442 46
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceee
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~ 166 (570)
+..+..++++. .+.....++++|+||.+.-. ...-+.+-++|.+. + ..+|+.+|....
T Consensus 71 i~~~~~~i~~~------~~~~~~f~~~~DvVi~a~Dn--------------~~aR~~ln~~c~~~-~-iplI~~g~~G~~ 128 (234)
T cd01484 71 VVPYQNKVGPE------QDFNDTFFEQFHIIVNALDN--------------IIARRYVNGMLIFL-I-VPLIESGTEGFK 128 (234)
T ss_pred EEEEeccCChh------hhchHHHHhCCCEEEECCCC--------------HHHHHHHHHHHHHc-C-CCEEEEcccCCc
Confidence 77788888631 12223567899999987432 22233455667764 3 568888776555
Q ss_pred cC
Q 008324 167 GE 168 (570)
Q Consensus 167 ~~ 168 (570)
|.
T Consensus 129 G~ 130 (234)
T cd01484 129 GN 130 (234)
T ss_pred eE
Confidence 43
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=90.23 E-value=0.86 Score=41.42 Aligned_cols=37 Identities=22% Similarity=0.351 Sum_probs=30.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
.++++|+|+|+ |.+|..+++.|.+.+ ...|++..|+.
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g--~~~v~v~~r~~ 53 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELG--AAKIVIVNRTL 53 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCC--CCEEEEEcCCH
Confidence 56799999997 999999999999875 36778887764
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=90.01 E-value=3.7 Score=42.19 Aligned_cols=106 Identities=17% Similarity=0.179 Sum_probs=62.5
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|.|| |.+|..++..++..+. ..|++..+.+...... .+ ++ .+... .. ..... +.+
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la~~~~--~ev~L~D~~~~~~~~~-~~--dl-----~~~~~---~~------~~~~~-i~~ 61 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLALKEL--GDVVLFDIVEGVPQGK-AL--DI-----AEAAP---VE------GFDTK-ITG 61 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC--eEEEEEECCCchhHHH-HH--HH-----Hhhhh---hc------CCCcE-EEe
Confidence 68999998 9999999999987653 2778887754322111 10 11 11000 00 00111 111
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~-f~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
..+. ..++++|+||-+++... ......+.+..|+.-.+.+++...+.
T Consensus 62 ----------~~d~--~~~~~aDiVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~ 109 (307)
T PRK06223 62 ----------TNDY--EDIAGSDVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKY 109 (307)
T ss_pred ----------CCCH--HHHCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122 23578999999988653 23344566778888888888877664
|
|
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=89.61 E-value=0.68 Score=47.47 Aligned_cols=37 Identities=22% Similarity=0.257 Sum_probs=31.7
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-.|.+|+|+||+|.+|..+++.+...| .+|++++|+.
T Consensus 161 ~~~~~vlI~ga~g~vG~~~~~~a~~~g---~~v~~~~~~~ 197 (332)
T cd08259 161 KKGDTVLVTGAGGGVGIHAIQLAKALG---ARVIAVTRSP 197 (332)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC---CeEEEEeCCH
Confidence 457899999999999999999999887 5678887754
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=89.46 E-value=3.3 Score=40.71 Aligned_cols=124 Identities=18% Similarity=0.253 Sum_probs=68.0
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHH---hhhh----hHHHHHhhhccccc
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEV---LAKD----VFNVLKEKWGTRLN 80 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l---~~~~----~f~~l~~~~~~~~~ 80 (570)
+-+++.+|+|.|. |-+|++.+|.|.|+| |.++.++.-..-..+-..|.--.+ +..+ +=++++.-.|.
T Consensus 26 ekl~~~~V~VvGi-GGVGSw~veALaRsG--ig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~--- 99 (263)
T COG1179 26 EKLKQAHVCVVGI-GGVGSWAVEALARSG--IGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPE--- 99 (263)
T ss_pred HHHhhCcEEEEec-CchhHHHHHHHHHcC--CCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCC---
Confidence 3466789999996 559999999999987 577776654332211111100000 0011 11344444432
Q ss_pred cccCCceEEEeccCCCCCCCCCchhhHHHHh-CCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 81 SFISEKITFVPGDISSEDLGLKDSNLKEELW-NELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 81 ~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~-~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
-+|..+..=++ .+. .+.++ .+.|+||.+-= |+..-..|+..|++. ++ -.
T Consensus 100 ----c~V~~~~~f~t-------~en-~~~~~~~~~DyvIDaiD--------------~v~~Kv~Li~~c~~~-ki---~v 149 (263)
T COG1179 100 ----CEVTAINDFIT-------EEN-LEDLLSKGFDYVIDAID--------------SVRAKVALIAYCRRN-KI---PV 149 (263)
T ss_pred ----ceEeehHhhhC-------HhH-HHHHhcCCCCEEEEchh--------------hhHHHHHHHHHHHHc-CC---CE
Confidence 34444444444 233 33444 46999998642 233445688899986 43 34
Q ss_pred Eecceeec
Q 008324 160 VSTAYVAG 167 (570)
Q Consensus 160 vSTa~v~~ 167 (570)
+||..+.+
T Consensus 150 Iss~Gag~ 157 (263)
T COG1179 150 ISSMGAGG 157 (263)
T ss_pred EeeccccC
Confidence 56655544
|
|
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=89.26 E-value=2.6 Score=36.72 Aligned_cols=30 Identities=17% Similarity=0.492 Sum_probs=23.3
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCccEEEEE
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLF 45 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~~V~~l 45 (570)
+|.|+|++|.+|+.+++.|... +++ +++.+
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~-~~~-~l~av 30 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEH-PDF-EVVAL 30 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcC-CCc-eEEEE
Confidence 4789999999999999988874 344 45555
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=89.14 E-value=2.2 Score=40.11 Aligned_cols=95 Identities=16% Similarity=0.160 Sum_probs=54.7
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
-..|++|.|.| .|-||+.+++.|..-| .+|+...|..+....... .-....-++.+-+ ...+.
T Consensus 33 ~l~g~tvgIiG-~G~IG~~vA~~l~~fG---~~V~~~d~~~~~~~~~~~---~~~~~~~l~ell~----------~aDiv 95 (178)
T PF02826_consen 33 ELRGKTVGIIG-YGRIGRAVARRLKAFG---MRVIGYDRSPKPEEGADE---FGVEYVSLDELLA----------QADIV 95 (178)
T ss_dssp -STTSEEEEES-TSHHHHHHHHHHHHTT----EEEEEESSCHHHHHHHH---TTEEESSHHHHHH----------H-SEE
T ss_pred ccCCCEEEEEE-EcCCcCeEeeeeecCC---ceeEEecccCChhhhccc---ccceeeehhhhcc----------hhhhh
Confidence 35799999998 7999999999999877 578888887754321100 0001111111111 14566
Q ss_pred EEeccCCCCCCCCCchhhHHHHhCCccEEEEcC
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSA 121 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~A 121 (570)
.+..-++...-++-+.+.. ...++=-++||.|
T Consensus 96 ~~~~plt~~T~~li~~~~l-~~mk~ga~lvN~a 127 (178)
T PF02826_consen 96 SLHLPLTPETRGLINAEFL-AKMKPGAVLVNVA 127 (178)
T ss_dssp EE-SSSSTTTTTSBSHHHH-HTSTTTEEEEESS
T ss_pred hhhhccccccceeeeeeee-eccccceEEEecc
Confidence 6666666666666556555 3334334666665
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=89.02 E-value=2.8 Score=45.42 Aligned_cols=75 Identities=19% Similarity=0.221 Sum_probs=49.6
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
..++|+|.|+ |.+|+.+++.|.+.+ ..|+++.+++.. .+++. ++ ...+..+
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~~~~---~~v~vid~~~~~---~~~~~-------------~~---------~~~~~~i 280 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLEKEG---YSVKLIERDPER---AEELA-------------EE---------LPNTLVL 280 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCC---CeEEEEECCHHH---HHHHH-------------HH---------CCCCeEE
Confidence 3688999997 999999999999877 456666655421 12222 11 1356789
Q ss_pred eccCCCCCCCCCchhhH-HHHhCCccEEEEcC
Q 008324 91 PGDISSEDLGLKDSNLK-EELWNELDIMVNSA 121 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~-~~l~~~vdiViH~A 121 (570)
.||.++ .+.+ +.-++++++||-+.
T Consensus 281 ~gd~~~-------~~~L~~~~~~~a~~vi~~~ 305 (453)
T PRK09496 281 HGDGTD-------QELLEEEGIDEADAFIALT 305 (453)
T ss_pred ECCCCC-------HHHHHhcCCccCCEEEECC
Confidence 999984 3333 33456789888543
|
|
| >TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial | Back alignment and domain information |
|---|
Probab=88.80 E-value=0.51 Score=49.53 Aligned_cols=37 Identities=16% Similarity=0.327 Sum_probs=29.4
Q ss_pred CEEEEECCcchhHHHHHHHHH-HhCCCccEEEEEEcCC
Q 008324 13 KTILVSGVTGFVAKVFIEKIL-RVQPNVKKLYLFVRAA 49 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl-~~~~~V~~V~~lvR~~ 49 (570)
++|.|.||||-+|+.+++.|. ++...+.+++++.-++
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~ 38 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQ 38 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchh
Confidence 479999999999999999998 5555666777766543
|
|
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=88.64 E-value=0.55 Score=49.33 Aligned_cols=35 Identities=17% Similarity=0.362 Sum_probs=28.0
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
.+|.|+||||++|+.|++.|++ .|++ ++..++++.
T Consensus 4 ~~V~I~GatG~iG~~l~~~L~~-~p~~-el~~~~~s~ 38 (349)
T PRK08664 4 LKVGILGATGMVGQRFVQLLAN-HPWF-EVTALAASE 38 (349)
T ss_pred cEEEEECCCCHHHHHHHHHHHc-CCCc-eEEEEEcCh
Confidence 6899999999999999998886 4554 666665554
|
|
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.57 E-value=0.95 Score=46.73 Aligned_cols=32 Identities=19% Similarity=0.403 Sum_probs=26.4
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEE
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV 46 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lv 46 (570)
.+|+|.||||+.|..|++.|+.+ |++. +.+..
T Consensus 3 ~kV~IvGasGYtG~EL~rlL~~H-p~ve-~~~~s 34 (349)
T COG0002 3 IKVGIVGASGYTGLELLRLLAGH-PDVE-LILIS 34 (349)
T ss_pred ceEEEEcCCCCcHHHHHHHHhcC-CCeE-EEEee
Confidence 58999999999999999988874 7876 44444
|
|
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=88.51 E-value=2.4 Score=43.29 Aligned_cols=38 Identities=21% Similarity=0.289 Sum_probs=31.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~ 50 (570)
.+|++++|.|| |..+++++-.|...+ +.+|++..|+..
T Consensus 122 ~~~k~vlvlGa-GGaarAi~~~l~~~g--~~~i~i~nRt~~ 159 (288)
T PRK12749 122 IKGKTMVLLGA-GGASTAIGAQGAIEG--LKEIKLFNRRDE 159 (288)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCC--CCEEEEEeCCcc
Confidence 46899999997 555999999998765 478999999864
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=88.48 E-value=1.5 Score=44.65 Aligned_cols=36 Identities=11% Similarity=0.309 Sum_probs=30.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
.+|++|+|.|+ |-+|+.+++.|...| .+|++..|+.
T Consensus 149 l~gk~v~IiG~-G~iG~avA~~L~~~G---~~V~v~~R~~ 184 (287)
T TIGR02853 149 IHGSNVMVLGF-GRTGMTIARTFSALG---ARVFVGARSS 184 (287)
T ss_pred CCCCEEEEEcC-hHHHHHHHHHHHHCC---CEEEEEeCCH
Confidence 56899999996 889999999999887 4788888864
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p | Back alignment and domain information |
|---|
Probab=88.37 E-value=4.4 Score=45.60 Aligned_cols=39 Identities=13% Similarity=0.169 Sum_probs=32.4
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
+-+++.+|+|.|| |-+|..+++.|++.| |++|.++....
T Consensus 334 ekL~~~kVLIvGa-GGLGs~VA~~La~~G--Vg~ItlVD~D~ 372 (664)
T TIGR01381 334 ERYSQLKVLLLGA-GTLGCNVARCLIGWG--VRHITFVDNGK 372 (664)
T ss_pred HHHhcCeEEEECC-cHHHHHHHHHHHHcC--CCeEEEEcCCE
Confidence 5678899999996 669999999999976 68888876654
|
This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy. |
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=88.03 E-value=1.5 Score=45.22 Aligned_cols=34 Identities=12% Similarity=0.329 Sum_probs=29.1
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~ 50 (570)
++|.|.| +|++|..++..|++.| .+|.+..|++.
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G---~~V~v~d~~~~ 36 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAG---HEVRLWDADPA 36 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCC---CeeEEEeCCHH
Confidence 4799999 8999999999999998 56788887753
|
|
| >cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively | Back alignment and domain information |
|---|
Probab=87.66 E-value=1.7 Score=44.29 Aligned_cols=99 Identities=19% Similarity=0.148 Sum_probs=54.2
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HH--H---hhhhhHHHHHhhhccccccccC
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NE--V---LAKDVFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~--l---~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
+|+|.|+ |-+|..+++.|.+.| |+++.++....-..+-..|.. ++ + -....-++|++.+|.
T Consensus 1 kVLIvGa-GGLGs~vA~~La~aG--Vg~ItlvD~D~Ve~sNL~RQ~L~~~~D~~iGk~Ka~aaa~~L~~iNP~------- 70 (307)
T cd01486 1 KCLLLGA-GTLGCNVARNLLGWG--VRHITFVDSGKVSYSNPVRQSLFTFEDCKGGKPKAEAAAERLKEIFPS------- 70 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHHcC--CCeEEEECCCEeccccCCcccccccchhhcCccHHHHHHHHHHHHCCC-------
Confidence 5899986 569999999999976 678777654432211111100 00 0 001123455555542
Q ss_pred CceEEEeccCCCCCCCC---------CchhhHHHHhCCccEEEEcCc
Q 008324 85 EKITFVPGDISSEDLGL---------KDSNLKEELWNELDIMVNSAA 122 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgl---------s~~~~~~~l~~~vdiViH~AA 122 (570)
-+++.+...+.-|+.-+ .+.+..++++++.|+||.+.-
T Consensus 71 v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~d~tD 117 (307)
T cd01486 71 IDATGIVLSIPMPGHPISESEVPSTLKDVKRLEELIKDHDVIFLLTD 117 (307)
T ss_pred cEEEEeeeeccccccccccccccccccCHHHHHHHHhhCCEEEECCC
Confidence 34555544442111111 134445688899999998863
|
This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole. |
| >cd01493 APPBP1_RUB Ubiquitin activating enzyme (E1) subunit APPBP1 | Back alignment and domain information |
|---|
Probab=87.63 E-value=5.2 Score=43.14 Aligned_cols=130 Identities=8% Similarity=0.047 Sum_probs=73.2
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHHh---hhhhHHHHHhhhcccc
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEVL---AKDVFNVLKEKWGTRL 79 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l~---~~~~f~~l~~~~~~~~ 79 (570)
++-+.+.+|+|.|++| +|..+++.|...| |++++++.-..-..+-..+-. +++= ...+-+.|++-+|.
T Consensus 15 Q~~L~~s~VlliG~gg-lGsEilKNLvL~G--Ig~~tIvD~~~V~~sDL~~nFfl~~~diGk~kA~~~~~~L~eLNp~-- 89 (425)
T cd01493 15 QAALESAHVCLLNATA-TGTEILKNLVLPG--IGSFTIVDGSKVDEEDLGNNFFLDASSLGKSRAEATCELLQELNPD-- 89 (425)
T ss_pred HHHHhhCeEEEEcCcH-HHHHHHHHHHHcC--CCeEEEECCCcCchhhccccccCChhhcCcHHHHHHHHHHHHHCCC--
Confidence 5567789999999777 9999999999865 788887765432111111100 0000 01122344444442
Q ss_pred ccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
-++.++..++.+- .+....++.+.|+||-+-. +... ...+.++|.+. + ..+|+
T Consensus 90 -----V~i~~~~e~~~~l------l~~~~~f~~~fdiVI~t~~------~~~~--------~~~L~~~c~~~-~-iPlI~ 142 (425)
T cd01493 90 -----VNGSAVEESPEAL------LDNDPSFFSQFTVVIATNL------PEST--------LLRLADVLWSA-N-IPLLY 142 (425)
T ss_pred -----CEEEEEecccchh------hhhHHHHhcCCCEEEECCC------CHHH--------HHHHHHHHHHc-C-CCEEE
Confidence 3455665555421 0111356788999984321 1221 22355777774 4 46999
Q ss_pred EecceeecC
Q 008324 160 VSTAYVAGE 168 (570)
Q Consensus 160 vSTa~v~~~ 168 (570)
++|...+|.
T Consensus 143 ~~s~G~~G~ 151 (425)
T cd01493 143 VRSYGLYGY 151 (425)
T ss_pred EecccCEEE
Confidence 999877764
|
APPBP1 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. ABPP1 contains part of the adenylation domain. |
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=87.55 E-value=8.3 Score=36.13 Aligned_cols=90 Identities=22% Similarity=0.175 Sum_probs=52.9
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH---HHHh---hhhhHHHHHhhhccccccccCCce
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ---NEVL---AKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~---~~l~---~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
+|+|.|+ |-+|..+++.|.+.| |.++.++....-..+-..|-. +++- ....-.++++.+| .-++
T Consensus 1 ~VlViG~-GglGs~ia~~La~~G--vg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp-------~v~i 70 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSG--VGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINP-------FVKI 70 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcC--CCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCC-------CCEE
Confidence 5899995 779999999999976 577888877652211111100 0110 0011233333333 2456
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhCCccEEEEcC
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSA 121 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~A 121 (570)
..+...++ .++ ...+++++|+||.+.
T Consensus 71 ~~~~~~~~-------~~~-~~~~l~~~DlVi~~~ 96 (174)
T cd01487 71 EAINIKID-------ENN-LEGLFGDCDIVVEAF 96 (174)
T ss_pred EEEEeecC-------hhh-HHHHhcCCCEEEECC
Confidence 66766665 333 346778999999884
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=87.37 E-value=1.5 Score=39.17 Aligned_cols=92 Identities=14% Similarity=0.169 Sum_probs=60.2
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++++|++.| +| -|..+++.|.+.| ..|.++..++... +... ...+.++
T Consensus 16 ~~~kileIG-~G-fG~~vA~~L~~~G---~~ViaIDi~~~aV---~~a~------------------------~~~~~~v 63 (134)
T PRK04148 16 KNKKIVELG-IG-FYFKVAKKLKESG---FDVIVIDINEKAV---EKAK------------------------KLGLNAF 63 (134)
T ss_pred cCCEEEEEE-ec-CCHHHHHHHHHCC---CEEEEEECCHHHH---HHHH------------------------HhCCeEE
Confidence 347799998 56 6888899999888 5677777665421 1111 1356799
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEE
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V 158 (570)
.+|+.+|+ . .+-+++|.|+-+=-+ .+ -...++++|++. +..-+|
T Consensus 64 ~dDlf~p~-------~--~~y~~a~liysirpp------~e--------l~~~~~~la~~~-~~~~~i 107 (134)
T PRK04148 64 VDDLFNPN-------L--EIYKNAKLIYSIRPP------RD--------LQPFILELAKKI-NVPLII 107 (134)
T ss_pred ECcCCCCC-------H--HHHhcCCEEEEeCCC------HH--------HHHHHHHHHHHc-CCCEEE
Confidence 99999663 1 455789999865222 22 134588899987 554433
|
|
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=87.35 E-value=0.85 Score=44.46 Aligned_cols=34 Identities=24% Similarity=0.198 Sum_probs=29.2
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
|+|.|.||+|.+|..++..|.+.+ ++|.+..|+.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G---~~V~v~~r~~ 34 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAG---NKIIIGSRDL 34 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCC---CEEEEEEcCH
Confidence 479999999999999999999988 5667777754
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=87.35 E-value=1.6 Score=46.84 Aligned_cols=37 Identities=22% Similarity=0.504 Sum_probs=32.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
+.|++|+|.|+ |-+|+.++..|...|. ..|++..|+.
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~g~--~~I~V~nRt~ 215 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTALAP--KQIMLANRTI 215 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence 57899999996 8899999999998764 6889999975
|
|
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=87.27 E-value=2.1 Score=39.61 Aligned_cols=27 Identities=30% Similarity=0.407 Sum_probs=23.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQ 36 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~ 36 (570)
++||+|+|.|.++.+|+.|...|++++
T Consensus 34 l~Gk~v~VvGrs~~VG~Pla~lL~~~~ 60 (160)
T PF02882_consen 34 LEGKKVVVVGRSNIVGKPLAMLLLNKG 60 (160)
T ss_dssp TTT-EEEEE-TTTTTHHHHHHHHHHTT
T ss_pred CCCCEEEEECCcCCCChHHHHHHHhCC
Confidence 679999999999999999999999987
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=87.12 E-value=1.2 Score=44.87 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=29.7
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
++++++|+|+ |-+|+.++..|++.+ .+|++..|+.
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~~~g---~~v~v~~R~~ 150 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLLKAD---CNVIIANRTV 150 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHCC---CEEEEEeCCH
Confidence 4789999997 789999999999877 4778887764
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=86.99 E-value=3.9 Score=44.61 Aligned_cols=41 Identities=22% Similarity=0.413 Sum_probs=33.0
Q ss_pred cHHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 5 ~i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
...+|+.+++|+|.| .|-.|..+++.|++.| ..|.+..+.+
T Consensus 7 ~~~~~~~~~~i~v~G-~G~sG~a~a~~L~~~G---~~V~~~D~~~ 47 (458)
T PRK01710 7 EFKKFIKNKKVAVVG-IGVSNIPLIKFLVKLG---AKVTAFDKKS 47 (458)
T ss_pred HHhhhhcCCeEEEEc-ccHHHHHHHHHHHHCC---CEEEEECCCC
Confidence 455678899999998 5779999999999998 5667776654
|
|
| >TIGR01771 L-LDH-NAD L-lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=86.81 E-value=12 Score=38.39 Aligned_cols=109 Identities=16% Similarity=0.117 Sum_probs=66.5
Q ss_pred EECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccCCC
Q 008324 17 VSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISS 96 (570)
Q Consensus 17 ITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl~~ 96 (570)
|.| .|.+|..++-.|+..+ -+.++.++.+.+...... .+ ++.....| ...++.+..+|
T Consensus 1 iIG-aG~VG~~~a~~l~~~~-l~~el~L~Di~~~~~~g~-a~--Dl~~~~~~--------------~~~~~~i~~~~--- 58 (299)
T TIGR01771 1 IIG-AGNVGSSTAFALLNQG-IADEIVLIDINKDKAEGE-AM--DLQHAASF--------------LPTPKKIRSGD--- 58 (299)
T ss_pred CCC-cCHHHHHHHHHHHhcC-CCCEEEEEeCCCChhhHH-HH--HHHHhhcc--------------cCCCeEEecCC---
Confidence 346 5999999999988754 346788887755332221 11 22211111 11223332221
Q ss_pred CCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 97 EDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 97 ~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
. +.++++|+|+-+|+..+- ..+-...++.|+.-.+.+.+...+. +.+.++.
T Consensus 59 -------~----~~~~daDivVitag~~rk~g~~R~dll~~N~~i~~~~~~~i~~~-~p~~~vi 110 (299)
T TIGR01771 59 -------Y----SDCKDADLVVITAGAPQKPGETRLELVGRNVRIMKSIVPEVVKS-GFDGIFL 110 (299)
T ss_pred -------H----HHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEE
Confidence 1 345889999999997543 2345567899999999999988886 4444433
|
This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases. |
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=86.39 E-value=13 Score=38.00 Aligned_cols=112 Identities=18% Similarity=0.113 Sum_probs=67.2
Q ss_pred EEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccC
Q 008324 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (570)
Q Consensus 15 VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl 94 (570)
|.|.|+ |.+|..++-.|+..+ -+.+++++.+.+...... ..++..... . ..+.....++
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~-~~~el~l~D~~~~~~~g~---~~DL~~~~~--------------~-~~~~~i~~~~- 59 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKG-LASELVLVDVNEEKAKGD---ALDLSHASA--------------F-LATGTIVRGG- 59 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCccHHHHH---HHhHHHhcc--------------c-cCCCeEEECC-
Confidence 467885 889999999888754 345788887755332221 112211100 0 0112222111
Q ss_pred CCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEE
Q 008324 95 SSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 95 ~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~v 160 (570)
+ . ..++++|+||-+|+..+- ..+....+..|+.-.+.+.+..++. +.+.+|.+
T Consensus 60 --------~---~-~~l~~aDiVIitag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~-~p~~~viv 113 (300)
T cd00300 60 --------D---Y-ADAADADIVVITAGAPRKPGETRLDLINRNAPILRSVITNLKKY-GPDAIILV 113 (300)
T ss_pred --------C---H-HHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEE
Confidence 1 1 345889999999997542 2344566889999999999988886 44444443
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=86.26 E-value=8.6 Score=39.55 Aligned_cols=106 Identities=17% Similarity=0.197 Sum_probs=63.0
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|.|+ |.+|..++..|+..+. ..|+++.+.+.-.... .+ ++ ++ +... .....++. ..+
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~--~~VvlvDi~~~l~~g~-a~--d~-----~~------~~~~-~~~~~~i~-~t~ 62 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKEL--ADLVLLDVVEGIPQGK-AL--DM-----YE------ASPV-GGFDTKVT-GTN 62 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCC--CeEEEEeCCCChhHHH-HH--hh-----hh------hhhc-cCCCcEEE-ecC
Confidence 57999996 9999999999988764 2577777744322111 00 11 11 0000 00001111 112
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
| . +. ++++|+||-+|+...- +++-...+..|+.-.+.+++...+.
T Consensus 63 d------------~-~~-~~~aDiVIitag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~ 108 (305)
T TIGR01763 63 N------------Y-AD-TANSDIVVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEH 108 (305)
T ss_pred C------------H-HH-hCCCCEEEEcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 2 23 4789999999997543 2344456888999999998877765
|
The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable. |
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=86.13 E-value=1.5 Score=45.03 Aligned_cols=38 Identities=18% Similarity=0.149 Sum_probs=30.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~ 50 (570)
-.|.+|+|+||+|-+|..+++-....| .+|++..++..
T Consensus 142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G---~~vi~~~~s~~ 179 (329)
T cd08294 142 KAGETVVVNGAAGAVGSLVGQIAKIKG---CKVIGCAGSDD 179 (329)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcC---CEEEEEeCCHH
Confidence 457899999999999999887777766 46787777653
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms [] | Back alignment and domain information |
|---|
Probab=85.99 E-value=6.4 Score=35.00 Aligned_cols=35 Identities=17% Similarity=0.334 Sum_probs=27.6
Q ss_pred EEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC
Q 008324 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (570)
Q Consensus 15 VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~ 50 (570)
|.|.|+||-||+..++-+.+ .|+-.+|+.|.-.++
T Consensus 1 i~ILGsTGSIG~qtLdVi~~-~~d~f~v~~Lsa~~n 35 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRK-HPDKFEVVALSAGSN 35 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHH-CTTTEEEEEEEESST
T ss_pred CEEEcCCcHHHHHHHHHHHh-CCCceEEEEEEcCCC
Confidence 67999999999998877665 566678888876444
|
In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A .... |
| >PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=85.93 E-value=1.1 Score=47.16 Aligned_cols=36 Identities=17% Similarity=0.350 Sum_probs=26.4
Q ss_pred CEEEEECCcchhHHHHHHHHHHhC-CCccEEEEEEcC
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQ-PNVKKLYLFVRA 48 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~-~~V~~V~~lvR~ 48 (570)
.+|.|.||||++|+.+++.|+++- ..+.+++.+..+
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~ 38 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTS 38 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecch
Confidence 479999999999999999777642 234456665544
|
|
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=85.64 E-value=27 Score=36.16 Aligned_cols=117 Identities=15% Similarity=0.166 Sum_probs=69.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.+.++|.|.| +|.+|..++..++..+. ..|+++.+++.... .+.+. +... . ........+
T Consensus 4 ~~~~KI~IIG-aG~vG~~ia~~la~~gl--~~i~LvDi~~~~~~-~~~ld--~~~~--------~------~~~~~~~~I 63 (321)
T PTZ00082 4 IKRRKISLIG-SGNIGGVMAYLIVLKNL--GDVVLFDIVKNIPQ-GKALD--ISHS--------N------VIAGSNSKV 63 (321)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhCCC--CeEEEEeCCCchhh-HHHHH--HHhh--------h------hccCCCeEE
Confidence 3557999999 59999999998877653 45788877665432 12221 1100 0 000111122
Q ss_pred Ee-ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cc-----cHHHHHHHhHHHHHHHHHHHHHccCce-EEEEEe
Q 008324 90 VP-GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DE-----RYDVAFGINTLGVIHLVNFAKKCVKLK-VFVHVS 161 (570)
Q Consensus 90 v~-gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~-----~~~~~~~~Nv~gt~~ll~la~~~~~l~-~~V~vS 161 (570)
.. +| . +.++++|+||.+|+..+- .. +....+..|+.-.+.+.+...+. ..+ .++.+|
T Consensus 64 ~~~~d------------~--~~l~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~-~p~a~~iv~s 128 (321)
T PTZ00082 64 IGTNN------------Y--EDIAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKY-CPNAFVIVIT 128 (321)
T ss_pred EECCC------------H--HHhCCCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence 21 22 1 235899999999987432 12 45667888988888888877775 333 344444
|
|
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=85.60 E-value=2.5 Score=42.70 Aligned_cols=38 Identities=18% Similarity=0.195 Sum_probs=32.2
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
..+|++|+|+||+|-+|..+++.+...+ .+|+++.+++
T Consensus 142 ~~~g~~vlI~g~~~~~g~~~~~~a~~~g---~~v~~~~~~~ 179 (325)
T cd08253 142 AKAGETVLVHGGSGAVGHAAVQLARWAG---ARVIATASSA 179 (325)
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcC---CEEEEEeCCH
Confidence 4568999999999999999999888877 5788888764
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >PRK06901 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=85.54 E-value=0.83 Score=46.91 Aligned_cols=35 Identities=6% Similarity=0.111 Sum_probs=29.7
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcC
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~ 48 (570)
.+|.| ||||-+|+.+++-|-++...+.+++++.-.
T Consensus 4 ~~iAi-GATg~VG~~~l~~Leer~fpv~~l~l~~s~ 38 (322)
T PRK06901 4 LNIAI-AAEFELSEKLLEALEQSDLEIEQISIVEIE 38 (322)
T ss_pred ceEEE-ecCcHHHHHHHHHHHhcCCchhheeecccc
Confidence 47999 999999999999998888778888877543
|
|
| >TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form | Back alignment and domain information |
|---|
Probab=85.52 E-value=2 Score=44.09 Aligned_cols=31 Identities=13% Similarity=0.263 Sum_probs=25.5
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCccEEEEE
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLF 45 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~~V~~l 45 (570)
+|.|.|||||.|..|++.|+++ |++.-+++.
T Consensus 3 ~v~IvGasGy~G~el~rlL~~H-P~~el~~l~ 33 (310)
T TIGR01851 3 KVFIDGEAGTTGLQIRERLSGR-DDIELLSIA 33 (310)
T ss_pred eEEEECCCChhHHHHHHHHhCC-CCeEEEEEe
Confidence 7999999999999999999885 777544443
|
This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. |
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=85.45 E-value=2.2 Score=44.15 Aligned_cols=37 Identities=14% Similarity=0.033 Sum_probs=29.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-.|.+|+|+||+|-+|..++.-+...| .+|++.+++.
T Consensus 150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G---~~Vi~~~~~~ 186 (338)
T cd08295 150 KKGETVFVSAASGAVGQLVGQLAKLKG---CYVVGSAGSD 186 (338)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcC---CEEEEEeCCH
Confidence 458899999999999999987776666 4577777764
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=84.84 E-value=2.1 Score=43.69 Aligned_cols=33 Identities=21% Similarity=0.305 Sum_probs=28.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF 45 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~l 45 (570)
++||+|.|.|.+|.+|+.++..|++.| ..|.+.
T Consensus 157 l~Gk~V~vIG~s~ivG~PmA~~L~~~g---atVtv~ 189 (301)
T PRK14194 157 LTGKHAVVIGRSNIVGKPMAALLLQAH---CSVTVV 189 (301)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCC---CEEEEE
Confidence 469999999999999999999999988 445544
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=84.79 E-value=0.65 Score=48.29 Aligned_cols=34 Identities=24% Similarity=0.297 Sum_probs=26.1
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcC
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~ 48 (570)
|.+|||+||||-+|...+.-....|. .+++.+.+
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~---~~v~~~~s 176 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGA---TVVAVVSS 176 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCC---cEEEEecC
Confidence 88999999999999998887777662 34444443
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=84.77 E-value=2.1 Score=43.82 Aligned_cols=36 Identities=14% Similarity=0.250 Sum_probs=30.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
..|++|+|.|+ |-+|+.++..|.+.| .+|++..|+.
T Consensus 150 l~g~kvlViG~-G~iG~~~a~~L~~~G---a~V~v~~r~~ 185 (296)
T PRK08306 150 IHGSNVLVLGF-GRTGMTLARTLKALG---ANVTVGARKS 185 (296)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCC---CEEEEEECCH
Confidence 36899999995 889999999999887 4778887764
|
|
| >KOG1496 consensus Malate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=84.37 E-value=8.2 Score=37.83 Aligned_cols=119 Identities=15% Similarity=0.149 Sum_probs=61.5
Q ss_pred EEEEECCcchhHHHHHHHHHHh---CCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 14 TILVSGVTGFVAKVFIEKILRV---QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~---~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+|+||||+|.||.+|+-.+.+- |++--.+..|.-.+......+-+.-|+ ++-.|..|+.
T Consensus 6 rVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~~~~~LegV~mEL-qD~a~PlL~~----------------- 67 (332)
T KOG1496|consen 6 RVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPPMMSVLEGVKMEL-QDCALPLLKG----------------- 67 (332)
T ss_pred EEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCchHHHHHHHHHHHH-HhhhhhHHHh-----------------
Confidence 7999999999999999999862 222222222332222222222222111 1112222221
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcccc-HHHHHHHhHHHHHHHHHHHHHc--cCceEEEEE
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDER-YDVAFGINTLGVIHLVNFAKKC--VKLKVFVHV 160 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~-~~~~~~~Nv~gt~~ll~la~~~--~~l~~~V~v 160 (570)
.+.+ .+ ....++++|+.|-..|..+-..- -++.+..|+.-.+.--.+..+. +++|.+|.-
T Consensus 68 -Vvat--------td-~~~afkdv~~ailvGa~PR~eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~KVlVVg 130 (332)
T KOG1496|consen 68 -VVAT--------TD-EVEAFKDVDVAILVGAMPRREGMERKDLLSANVKIFKSQGAALEKYAKPNVKVLVVG 130 (332)
T ss_pred -hhcc--------cC-hhhhhccCcEEEEeccccCcccchhhhHHhhcceeehhhhHHHHHhcCCCceEEEec
Confidence 1122 11 13678899999998887654321 2445778876544333333222 366655543
|
|
| >cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3 | Back alignment and domain information |
|---|
Probab=84.34 E-value=6.5 Score=40.11 Aligned_cols=89 Identities=16% Similarity=0.185 Sum_probs=52.7
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHHh---hhhhHHHHHhhhccccccccCCc
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEVL---AKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l~---~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
+|||.|+ |-+|..+++.|...| |+++.++....-..+-..|-. +++= ....-+++++..|. -+
T Consensus 1 kVlVVGa-GGlG~eilknLal~G--vg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~-------v~ 70 (291)
T cd01488 1 KILVIGA-GGLGCELLKNLALSG--FRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPG-------VN 70 (291)
T ss_pred CEEEECC-CHHHHHHHHHHHHcC--CCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCC-------CE
Confidence 5899985 669999999999976 578877665432222111100 0110 01112344444442 46
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcC
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSA 121 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~A 121 (570)
++++.+++.+ .+ ...++++|+||.+.
T Consensus 71 I~~~~~~i~~-------~~--~~f~~~fdvVi~al 96 (291)
T cd01488 71 VTPHFGKIQD-------KD--EEFYRQFNIIICGL 96 (291)
T ss_pred EEEEecccCc-------hh--HHHhcCCCEEEECC
Confidence 7788888873 22 25678999999864
|
UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.30 E-value=2.8 Score=41.11 Aligned_cols=73 Identities=21% Similarity=0.304 Sum_probs=49.5
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+++|.| .|-+|..+++.|.+.| +.|.++.+.+... ++..+ + ......+.|
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~g---~~Vv~Id~d~~~~---~~~~~-------------~---------~~~~~~v~g 51 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEEG---HNVVLIDRDEERV---EEFLA-------------D---------ELDTHVVIG 51 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhCC---CceEEEEcCHHHH---HHHhh-------------h---------hcceEEEEe
Confidence 5688888 5889999999999998 4556776654321 11000 0 145678999
Q ss_pred cCCCCCCCCCchhhHHHH-hCCccEEEEcC
Q 008324 93 DISSEDLGLKDSNLKEEL-WNELDIMVNSA 121 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l-~~~vdiViH~A 121 (570)
|-+ +++.++++ ++++|+++-+-
T Consensus 52 d~t-------~~~~L~~agi~~aD~vva~t 74 (225)
T COG0569 52 DAT-------DEDVLEEAGIDDADAVVAAT 74 (225)
T ss_pred cCC-------CHHHHHhcCCCcCCEEEEee
Confidence 999 56666555 67899998543
|
|
| >cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins | Back alignment and domain information |
|---|
Probab=84.24 E-value=12 Score=38.42 Aligned_cols=104 Identities=16% Similarity=0.173 Sum_probs=60.8
Q ss_pred EEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccC
Q 008324 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (570)
Q Consensus 15 VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl 94 (570)
|.|.|| |.+|..++..|+..+.. .|+++.+++....... + ++ .+.... ......+ ..
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~--eV~L~Di~e~~~~g~~-~--dl-----~~~~~~---------~~~~~~I-~~-- 57 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELG--DVVLLDIVEGLPQGKA-L--DI-----SQAAPI---------LGSDTKV-TG-- 57 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCc--EEEEEeCCCcHHHHHH-H--HH-----HHhhhh---------cCCCeEE-EE--
Confidence 468997 99999999988876532 7888888753221111 1 11 111000 0011111 11
Q ss_pred CCCCCCCCchhhHHHHhCCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 95 SSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 95 ~~~~lgls~~~~~~~l~~~vdiViH~AA~v~-f~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
+ .+ . ..++++|+||.+|+... .+......+..|+.-.+.+++...+.
T Consensus 58 t--------~d-~-~~l~dADiVIit~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~ 105 (300)
T cd01339 58 T--------ND-Y-EDIAGSDVVVITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKY 105 (300)
T ss_pred c--------CC-H-HHhCCCCEEEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 11 1 23588999999998753 23344456778888888888877775
|
Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas |
| >PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=84.09 E-value=2.7 Score=42.64 Aligned_cols=27 Identities=22% Similarity=0.293 Sum_probs=25.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQ 36 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~ 36 (570)
++||+|+|.|.++.+|+.|+..|++.+
T Consensus 156 l~Gk~vvViGrs~iVGkPla~lL~~~~ 182 (285)
T PRK14189 156 LRGAHAVVIGRSNIVGKPMAMLLLQAG 182 (285)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCC
Confidence 479999999999999999999999877
|
|
| >COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.69 E-value=9 Score=38.19 Aligned_cols=38 Identities=21% Similarity=0.452 Sum_probs=31.2
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~ 50 (570)
.++|.|.||+|=+|+.+++.+.+. |++.-+-++.|++.
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~-~~~~L~aa~~~~~~ 39 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEA-PDLELVAAFDRPGS 39 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcC-CCceEEEEEecCCc
Confidence 368999999999999999999875 46666777778764
|
|
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.59 E-value=37 Score=31.40 Aligned_cols=28 Identities=18% Similarity=0.146 Sum_probs=24.2
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCc
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNV 39 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V 39 (570)
..+|+|-||-|-+|++.++.+...++-|
T Consensus 3 agrVivYGGkGALGSacv~~FkannywV 30 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNYWV 30 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCeEE
Confidence 4589999999999999999999887433
|
|
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=83.39 E-value=2.3 Score=43.69 Aligned_cols=37 Identities=16% Similarity=0.056 Sum_probs=29.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-.|.+|+|+||+|-+|..++.-....| .+|++.+++.
T Consensus 137 ~~g~~VLI~ga~g~vG~~aiqlAk~~G---~~Vi~~~~s~ 173 (325)
T TIGR02825 137 KGGETVMVNAAAGAVGSVVGQIAKLKG---CKVVGAAGSD 173 (325)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcC---CEEEEEeCCH
Confidence 357899999999999999887666666 4678777764
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=83.29 E-value=7.3 Score=37.51 Aligned_cols=34 Identities=24% Similarity=0.304 Sum_probs=28.7
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEc
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR 47 (570)
++|++|+|.|| |=+|...++.|++.| .+|.++.+
T Consensus 8 l~~k~vLVIGg-G~va~~ka~~Ll~~g---a~V~VIs~ 41 (202)
T PRK06718 8 LSNKRVVIVGG-GKVAGRRAITLLKYG---AHIVVISP 41 (202)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCC---CeEEEEcC
Confidence 67999999996 889999999999988 45666654
|
|
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=83.20 E-value=1.6 Score=45.61 Aligned_cols=33 Identities=27% Similarity=0.452 Sum_probs=24.8
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEc
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR 47 (570)
++|.|+||||++|++|++.|.++ +++ .|..+++
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~-~~~-~l~~v~~ 33 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKH-PYF-ELAKVVA 33 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCc-eEEEEEE
Confidence 47999999999999999977764 454 4444433
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=83.07 E-value=3.4 Score=41.93 Aligned_cols=27 Identities=15% Similarity=0.181 Sum_probs=25.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQ 36 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~ 36 (570)
+.||+|+|.|.+..+|+-|+..|++.+
T Consensus 157 l~Gk~vvViGrs~iVG~Pla~lL~~~~ 183 (285)
T PRK10792 157 TYGLNAVVVGASNIVGRPMSLELLLAG 183 (285)
T ss_pred CCCCEEEEECCCcccHHHHHHHHHHCC
Confidence 469999999999999999999999877
|
|
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=82.92 E-value=2.5 Score=43.83 Aligned_cols=35 Identities=14% Similarity=0.092 Sum_probs=27.9
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
.+|+|+||+|-+|..++.-....|. .+|++.++++
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~--~~Vi~~~~s~ 190 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGC--SRVVGICGSD 190 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCC--CEEEEEcCCH
Confidence 8999999999999998876666662 3688887764
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=82.35 E-value=3.1 Score=42.94 Aligned_cols=27 Identities=11% Similarity=0.313 Sum_probs=22.7
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCcc
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVK 40 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~ 40 (570)
.+|.|.||||++|..|++.|.++ |++.
T Consensus 3 ~~VaIvGAtGy~G~eLlrlL~~h-p~~~ 29 (313)
T PRK11863 3 PKVFIDGEAGTTGLQIRERLAGR-SDIE 29 (313)
T ss_pred cEEEEECCCCHHHHHHHHHHhcC-CCeE
Confidence 47999999999999999977764 6663
|
|
| >PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=81.56 E-value=12 Score=40.49 Aligned_cols=96 Identities=20% Similarity=0.244 Sum_probs=56.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+.+++|+|+|+. -.|..+++.|.+.| .+|.+..+.+... ..++++ +. ..++.+
T Consensus 3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g---~~v~~~d~~~~~~-~~~~l~-------------~~---------~~gi~~ 55 (445)
T PRK04308 3 FQNKKILVAGLG-GTGISMIAYLRKNG---AEVAAYDAELKPE-RVAQIG-------------KM---------FDGLVF 55 (445)
T ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCC---CEEEEEeCCCCch-hHHHHh-------------hc---------cCCcEE
Confidence 468999999975 69999999999988 5566665443321 111222 00 125556
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHH--HhHHHHHHH
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFG--INTLGVIHL 144 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~--~Nv~gt~~l 144 (570)
..|... . ....+.|.||.+.|.......+..+.+ +.+.+-..+
T Consensus 56 ~~g~~~--------~----~~~~~~d~vv~spgi~~~~p~~~~a~~~~i~v~~~~~~ 100 (445)
T PRK04308 56 YTGRLK--------D----ALDNGFDILALSPGISERQPDIEAFKQNGGRVLGDIEL 100 (445)
T ss_pred EeCCCC--------H----HHHhCCCEEEECCCCCCCCHHHHHHHHcCCcEEEhHHH
Confidence 555432 1 233578999999998644444444443 333344444
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=81.49 E-value=6.3 Score=40.12 Aligned_cols=38 Identities=16% Similarity=0.242 Sum_probs=31.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~ 50 (570)
.++++|+|.|+ |..|++++..|...| +.+|+++.|+..
T Consensus 125 ~~~k~vlIlGa-GGaaraia~aL~~~G--~~~I~I~nR~~~ 162 (284)
T PRK12549 125 ASLERVVQLGA-GGAGAAVAHALLTLG--VERLTIFDVDPA 162 (284)
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHcC--CCEEEEECCCHH
Confidence 46789999996 669999999999876 478999988753
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=81.44 E-value=4.1 Score=45.07 Aligned_cols=38 Identities=18% Similarity=0.405 Sum_probs=32.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~ 50 (570)
+.+++|+|.|+ |-+|..++..|+..| +.+|++..|+..
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G--~~~V~V~nRs~e 301 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKG--CTKMVVVNRSEE 301 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCC--CCeEEEEeCCHH
Confidence 56899999997 999999999999876 367888888753
|
|
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=81.34 E-value=3 Score=41.02 Aligned_cols=36 Identities=19% Similarity=0.212 Sum_probs=29.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-.|.+|+|+|++| +|..+++.+...| .+|+++.++.
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~g---~~v~~~~~~~ 168 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAAG---ARVIVTDRSD 168 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcC---CeEEEEcCCH
Confidence 4688999999999 9999998887777 6778887764
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein | Back alignment and domain information |
|---|
Probab=81.29 E-value=6.3 Score=43.98 Aligned_cols=90 Identities=19% Similarity=0.286 Sum_probs=54.8
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
+.|+..+|+|.| +|-+|..++..|++.|. .+|.+++-..- .+...|+. ++. .+..+ +.+.+
T Consensus 125 ~~qR~akVlVlG-~Gg~~s~lv~sL~~sG~--~~I~~vd~D~v-~SNlnRIg-El~------e~A~~--------~n~~v 185 (637)
T TIGR03693 125 ELSRNAKILAAG-SGDFLTKLVRSLIDSGF--PRFHAIVTDAE-EHALDRIH-ELA------EIAEE--------TDDAL 185 (637)
T ss_pred hhhhcccEEEEe-cCchHHHHHHHHHhcCC--CcEEEEecccc-chhhhHHH-HHH------HHHHH--------hCCCC
Confidence 446888999999 45579999999999884 56666644433 33344433 110 11111 12344
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCcc
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAI 123 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~ 123 (570)
.+-..|.+. +.+. ..++++.|+|++.+-.
T Consensus 186 ~v~~i~~~~------~~dl-~ev~~~~DiVi~vsDd 214 (637)
T TIGR03693 186 LVQEIDFAE------DQHL-HEAFEPADWVLYVSDN 214 (637)
T ss_pred ceEeccCCc------chhH-HHhhcCCcEEEEECCC
Confidence 444444432 4454 5888999999998754
|
Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein. |
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=81.23 E-value=3.3 Score=42.69 Aligned_cols=37 Identities=22% Similarity=0.322 Sum_probs=30.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
..|++|+|.|+ |-+|..++..|...+ ..+|++..|+.
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g--~~~V~v~~r~~ 212 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKG--VAEITIANRTY 212 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcC--CCEEEEEeCCH
Confidence 47899999996 999999999988744 36788888865
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=81.15 E-value=4.1 Score=41.04 Aligned_cols=38 Identities=13% Similarity=0.142 Sum_probs=31.5
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
.-+|.+|+|+|++|-+|..+++.+...| .+|++..++.
T Consensus 137 ~~~~~~vlv~g~~~~ig~~~~~~~~~~g---~~v~~~~~~~ 174 (323)
T cd05276 137 LKAGETVLIHGGASGVGTAAIQLAKALG---ARVIATAGSE 174 (323)
T ss_pred CCCCCEEEEEcCcChHHHHHHHHHHHcC---CEEEEEcCCH
Confidence 4468899999999999999999998887 5677777753
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=81.09 E-value=3.4 Score=42.37 Aligned_cols=38 Identities=11% Similarity=0.071 Sum_probs=30.9
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
.-+|.+|+|.||+|-+|..+++.....| .+|++..++.
T Consensus 137 ~~~~~~vlI~ga~g~ig~~~~~~a~~~g---~~v~~~~~~~ 174 (329)
T cd08250 137 MKSGETVLVTAAAGGTGQFAVQLAKLAG---CHVIGTCSSD 174 (329)
T ss_pred CCCCCEEEEEeCccHHHHHHHHHHHHcC---CeEEEEeCcH
Confidence 4568899999999999999888777766 4677777754
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=80.95 E-value=3.8 Score=41.56 Aligned_cols=28 Identities=29% Similarity=0.388 Sum_probs=26.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQP 37 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~ 37 (570)
+.||+|.|.|.+|.+|+.++..|++.+.
T Consensus 156 l~Gk~v~vIG~S~ivG~Pla~lL~~~ga 183 (284)
T PRK14179 156 LEGKHAVVIGRSNIVGKPMAQLLLDKNA 183 (284)
T ss_pred CCCCEEEEECCCCcCcHHHHHHHHHCCC
Confidence 4799999999999999999999999883
|
|
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=80.82 E-value=4.1 Score=41.44 Aligned_cols=37 Identities=19% Similarity=0.219 Sum_probs=31.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
.+|++|+|.|| |-.|++++..|.+.| +.+|+++.|+.
T Consensus 123 ~~~k~vlvlGa-GGaarai~~aL~~~G--~~~i~I~nRt~ 159 (282)
T TIGR01809 123 LAGFRGLVIGA-GGTSRAAVYALASLG--VTDITVINRNP 159 (282)
T ss_pred cCCceEEEEcC-cHHHHHHHHHHHHcC--CCeEEEEeCCH
Confidence 46899999985 779999999999876 47899999975
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=80.65 E-value=13 Score=40.65 Aligned_cols=36 Identities=11% Similarity=0.263 Sum_probs=29.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
+.+++|+|.|+ |.+|..+++.|.+.| .+|.+..+..
T Consensus 14 ~~~~~v~viG~-G~~G~~~A~~L~~~G---~~V~~~d~~~ 49 (480)
T PRK01438 14 WQGLRVVVAGL-GVSGFAAADALLELG---ARVTVVDDGD 49 (480)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEeCCc
Confidence 57899999995 889999999999888 4566665543
|
|
| >KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=80.32 E-value=2.2 Score=45.68 Aligned_cols=37 Identities=14% Similarity=0.174 Sum_probs=28.1
Q ss_pred HHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEE
Q 008324 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF 45 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~l 45 (570)
-.+-.++.+|||.||. .||-.|+.-|+.+|. ..|.++
T Consensus 6 ~~eai~~~riLvVGaG-GIGCELLKnLal~gf--~~IhiI 42 (603)
T KOG2013|consen 6 KHEAIKSGRILVVGAG-GIGCELLKNLALTGF--EEIHII 42 (603)
T ss_pred HHHHhccCeEEEEecC-cccHHHHHHHHHhcC--CeeEEE
Confidence 3455678999999975 599999999999885 444443
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=80.26 E-value=3.6 Score=44.45 Aligned_cols=37 Identities=22% Similarity=0.343 Sum_probs=30.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
..|++|+|.|+ |-+|..++..|...|. .+|++..|+.
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~--~~V~v~~r~~ 216 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGV--RKITVANRTL 216 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCC--CeEEEEeCCH
Confidence 67899999985 9999999999987663 5788888864
|
|
| >PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=80.07 E-value=4.9 Score=40.80 Aligned_cols=27 Identities=22% Similarity=0.380 Sum_probs=25.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQ 36 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~ 36 (570)
+.||+|+|.|.+..+|+-|+..|++.+
T Consensus 162 l~Gk~vvViGrs~iVGkPla~lL~~~~ 188 (287)
T PRK14176 162 IEGKNAVIVGHSNVVGKPMAAMLLNRN 188 (287)
T ss_pred CCCCEEEEECCCcccHHHHHHHHHHCC
Confidence 479999999999999999999999877
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 570 | ||||
| 4dqv_A | 478 | Crystal Structure Of Reductase (R) Domain Of Non-Ri | 2e-10 |
| >pdb|4DQV|A Chain A, Crystal Structure Of Reductase (R) Domain Of Non-Ribosomal Peptide Synthetase From Mycobacterium Tuberculosis Length = 478 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 570 | |||
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 1e-42 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-11 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 4e-10 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 1e-04 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 2e-04 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 3e-04 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 5e-04 |
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 158 bits (400), Expect = 1e-42
Identities = 77/367 (20%), Positives = 130/367 (35%), Gaps = 66/367 (17%)
Query: 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNV 70
E +T+L++G TGF+ + + ++LR +L VRA + A R + F+
Sbjct: 72 ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRL------EKTFDS 125
Query: 71 LKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERY 130
+ ++++ V GD S DLGL L +D++V+SAA+ Y
Sbjct: 126 GDPELLRHFKELAADRLEVVAGDKSEPDLGLDQPMW-RRLAETVDLIVDSAAMVNAFP-Y 183
Query: 131 DVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEM 190
FG N G L+ A KLK F +VSTA V S DA++
Sbjct: 184 HELFGPNVAGTAELIRIALTT-KLKPFTYVSTADVGAAI----------EPSAFTEDADI 232
Query: 191 KVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ--SKEN 248
+VI R GW Y +K GE+L+++
Sbjct: 233 RVIS------------------------PTRTVDGGWAGGYGTSKWAGEVLLREANDLCA 268
Query: 249 LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQ--------GNLRCLVGETKVIM 300
L + + R ++ + D + + ++ +
Sbjct: 269 LPVAVFRCGMILADTSYAGQLNMSDW--VTRMVLSLMATGIAPRSFYEPDSEGNRQRAHF 326
Query: 301 DVIPVDMVVNAMIVAMVAHAKQPSDAN-IYHVGSSLRNPVTLVSILDYGFVYFTKKPWIN 359
D +PV V A+ V A YHV + + + L +D W+
Sbjct: 327 DGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVD----------WLI 376
Query: 360 KQGKPVK 366
+ G P++
Sbjct: 377 EAGYPIR 383
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 63.7 bits (154), Expect = 9e-11
Identities = 80/552 (14%), Positives = 156/552 (28%), Gaps = 181/552 (32%)
Query: 12 NKTILVSGVTGF-----VAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKD 66
K +L+ GV G V + ++ + + K +L ++ + L ++L +
Sbjct: 150 AKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQ- 208
Query: 67 VFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNL--KEELWNELDIM--VNSAA 122
+ W +R + + K+ + + L + N L ++ V +A
Sbjct: 209 ----IDPNWTSRSDHSSNIKLRI-------HSIQAELRRLLKSKPYENCLLVLLNVQNAK 257
Query: 123 ITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFV-----HVSTAYVAGERTGLILENP 177
AF + C K+ + V+ A T + L++
Sbjct: 258 AWN-------AFNL-------------SC---KILLTTRFKQVTDFLSAATTTHISLDHH 294
Query: 178 LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTER---------------- 221
L + K L +K L
Sbjct: 295 SMT----------------LTPDEVKS-------LLLKYLDCRPQDLPREVLTTNPRRLS 331
Query: 222 ---AKLHGWPNTYVFTKTMG----EMLMQQSKENLSLVIIRPTVVSGTYKEP--FPGWVE 272
+ T+ K + +++ S L P + FP
Sbjct: 332 IIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLE-----PAEYRKMFDRLSVFP---P 383
Query: 273 DLK-TINTLFVASAQGNLRCLV-GETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA--NI 328
L L+ + + V +VVN + + KQP ++ +I
Sbjct: 384 SAHIPTILL----------SLIWFD----VIKSDVMVVVNKLHKYSLV-EKQPKESTISI 428
Query: 329 YHVGSSLRNPVTLV-----SILDYGFVYFTKKPWINKQGKPVKVSKIILFSSIASFHGYM 383
+ L+ + SI+D+ Y K + + P + + +S I H
Sbjct: 429 PSIYLELKVKLENEYALHRSIVDH---YNIPKTFDSDDLIPPYLDQYF-YSHIG-HH--- 480
Query: 384 QIRYLLPLKGLQVANTVFHNFFKGVYNDLR---KKVKF-------------VMRVVEIYK 427
LK ++ + F+ V+ D R +K++ ++ ++ YK
Sbjct: 481 -------LKNIEHPERM--TLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYK 531
Query: 428 PYFYFNGIFDDTNTEKLRMTARGSRTETDLFYFDPDSIEWSDYFMNTHIPGVEKLLQQKR 487
PY I D+ R + F P E N LL+
Sbjct: 532 PY-----ICDNDPKY--------ERLVNAILDFLPKIEE------NLICSKYTDLLRIAL 572
Query: 488 SFPKTKVFRSGH 499
+F H
Sbjct: 573 MAEDEAIFEEAH 584
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 4e-10
Identities = 38/305 (12%), Positives = 72/305 (23%), Gaps = 93/305 (30%)
Query: 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEK 74
V G TG + I ++ L R +
Sbjct: 16 YAVLGATGLLGHHAARAIRAAGHDLV---LIHRPSS------------------------ 48
Query: 75 WGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDER-YDVA 133
++ + ++ D E LD ++ SA R +
Sbjct: 49 ---QIQRLAYLEPECRVAEML-------DHAGLERALRGLDGVIFSAGYYPSRPRRWQEE 98
Query: 134 FGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVI 193
+ ++ ++V +AY
Sbjct: 99 VASALGQTNPFYAACLQA-RVPRILYVGSAYAMPRHP----------------------- 134
Query: 194 DQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML-MQQSKENLSLV 252
+G P E + YV K + +Q++ L +V
Sbjct: 135 ---------QGLPGHEGLFY-----DSLPSGKSS---YVLCKWALDEQAREQARNGLPVV 177
Query: 253 IIRPTVVSGTYKEPFPGWVEDLK-TINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311
I P +V G D+ T + A G + V +VI
Sbjct: 178 IGIPGMVLG------EL---DIGPTTGRVITAIGNGEMTHYVAGQ---RNVIDAAEAGRG 225
Query: 312 MIVAM 316
+++A+
Sbjct: 226 LLMAL 230
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} Length = 287 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 1e-04
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 12/73 (16%)
Query: 115 DIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKV-FVHVSTAYV-AGER 169
I+++ AA TK D + D+A+ IN +G ++ A + V++ST YV G+R
Sbjct: 58 HIIIHCAAYTKVDQAEKERDLAYVINAIGARNV---AVASQLVGAKLVYISTDYVFQGDR 114
Query: 170 TGLILE----NPL 178
E P+
Sbjct: 115 PEGYDEFHNPAPI 127
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} Length = 273 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 2e-04
Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 14/108 (12%)
Query: 63 LAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELW-NELDIMVNSA 121
L ++ +L E+ SE D++ L++ + D+++N+A
Sbjct: 12 LGIELSRLLSERHEVIKVYNSSEIQGGYKLDLTDFP------RLEDFIIKKRPDVIINAA 65
Query: 122 AITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKV-FVHVSTAYV 165
A+T D + A+ IN V H+ + + VH+ST YV
Sbjct: 66 AMTDVDKCEIEKEKAYKINAEAVRHI---VRAGKVIDSYIVHISTDYV 110
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 Length = 292 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 3e-04
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 115 DIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKV-FVHVSTAYV 165
++++N AA T D E+YD+A+ IN +G +L A + V +ST YV
Sbjct: 65 NVVINCAAHTAVDKCEEQYDLAYKINAIGPKNL---AAAAYSVGAEIVQISTDYV 116
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 5e-04
Identities = 32/168 (19%), Positives = 51/168 (30%), Gaps = 41/168 (24%)
Query: 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFN 69
L N ++V G GFV ++++L N+V D
Sbjct: 30 LANTNVMVVGGAGFVGSNLVKRLLE----------------------LGVNQVHVVDNLL 67
Query: 70 VLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAIT----- 124
++N + F I+ D L L +E D + + A
Sbjct: 68 S-----AEKINVPDHPAVRFSETSIT-------DDALLASLQDEYDYVFHLATYHGNQSS 115
Query: 125 KFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172
D D NTL + L K +LK V+ + E+T
Sbjct: 116 IHDPLADHE--NNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFD 161
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 570 | |||
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 100.0 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.98 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.98 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.98 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.97 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.97 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.97 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.97 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.97 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.97 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.97 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.97 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.97 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.97 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.97 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.97 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.97 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.97 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.97 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.97 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.97 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.97 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.97 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.97 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.97 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.97 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.97 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.97 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.97 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.96 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.96 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.96 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.96 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.96 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.96 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.96 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.96 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.96 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.96 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.96 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.96 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.96 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.96 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.96 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.96 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.96 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.96 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.95 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.95 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.95 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.95 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.95 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.95 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.95 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.95 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.95 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.95 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.95 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.95 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.95 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.95 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.94 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.94 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.94 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.94 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.94 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.93 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.93 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.93 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.92 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.92 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.91 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.91 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.91 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.9 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.9 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.9 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.9 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.9 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.89 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.89 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.87 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.86 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.86 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.86 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.85 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.85 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.84 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.84 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.83 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.82 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.82 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.82 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.81 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.81 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.81 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.81 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.8 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.8 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.8 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.8 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.8 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.8 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.79 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.79 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.79 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.79 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.78 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.78 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.78 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.78 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.78 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.78 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.78 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.78 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.78 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.78 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.78 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.77 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.77 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.77 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.77 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.77 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.77 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.77 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.77 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.77 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.76 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.76 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.76 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.76 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.76 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.76 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.76 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.76 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.76 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.76 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.75 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.75 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.75 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.75 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.75 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.75 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.75 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.75 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.75 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.75 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.75 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.75 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.75 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.75 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.75 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.75 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.75 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.74 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.74 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.74 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.74 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.74 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.74 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.74 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.74 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.74 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.74 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.74 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.74 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.74 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.74 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.74 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.74 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.74 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.73 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.73 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.73 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.73 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.73 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.73 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.73 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.73 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.73 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.73 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.73 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.73 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.73 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.73 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.73 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.73 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.73 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.73 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.73 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.73 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.73 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.72 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.72 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.72 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.72 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.72 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.72 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.72 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.72 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.72 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.72 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.72 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.72 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.72 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.72 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.71 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.71 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.71 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.71 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.71 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.71 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.71 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.71 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.71 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.71 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.71 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.71 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.71 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.71 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.71 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.71 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.71 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.71 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.71 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.71 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.71 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.71 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.7 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.7 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.7 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.7 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.7 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.7 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.7 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.7 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.7 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.7 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.7 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.69 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.69 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.69 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.69 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.69 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.69 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.69 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.69 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.69 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.68 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.68 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.68 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.68 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.68 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.67 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.67 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.67 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.67 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.66 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.66 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.66 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.65 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.65 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.65 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.64 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.64 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.64 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.64 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.64 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.64 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.64 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.63 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.63 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.62 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.62 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.62 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.61 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.61 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.6 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.6 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.59 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.58 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.58 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.58 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.56 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.55 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.55 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.55 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.52 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.52 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.52 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.51 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.51 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.51 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.5 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.49 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.48 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.46 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.45 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.45 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.33 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.3 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.25 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.21 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.16 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.05 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.03 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.01 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 98.98 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 98.97 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.91 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.89 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 98.87 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.77 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.47 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.45 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.43 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 98.35 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.34 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 98.26 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.06 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 97.92 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 97.77 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 97.71 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 97.62 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 97.53 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 97.45 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 97.45 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 97.43 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 97.41 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 97.37 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 97.22 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 97.11 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 97.06 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 97.06 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 97.03 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 96.6 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 96.37 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 96.27 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 95.98 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 95.97 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 95.82 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 95.73 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 95.73 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 95.71 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 95.64 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 95.6 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 95.57 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 95.51 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 95.46 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 95.43 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 95.38 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 95.38 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 95.37 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 95.33 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 95.32 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 95.28 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 95.08 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 95.01 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 94.93 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 94.86 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 94.84 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 94.82 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 94.81 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 94.8 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 94.63 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 94.6 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 94.57 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 94.55 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 94.46 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 94.39 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 94.38 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 94.35 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 94.29 | |
| 2xxj_A | 310 | L-LDH, L-lactate dehydrogenase; oxidoreductase, hy | 93.89 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 93.79 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 93.72 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 93.55 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 93.5 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 93.5 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 93.49 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 93.48 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 93.47 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 93.47 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 93.4 | |
| 1y8q_B | 640 | Anthracycline-, ubiquitin-like 2 activating enzyme | 93.27 | |
| 7mdh_A | 375 | Protein (malate dehydrogenase); chloroplastic mala | 93.26 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 93.24 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 93.21 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 93.17 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 93.15 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 93.12 | |
| 3tz6_A | 344 | Aspartate-semialdehyde dehydrogenase; asadh, ASD, | 93.11 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 93.0 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 92.99 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 92.93 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 92.88 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 92.87 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 92.86 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 92.73 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 92.69 | |
| 1y8q_A | 346 | Ubiquitin-like 1 activating enzyme E1A; SUMO, hete | 92.67 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 92.47 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 92.45 | |
| 3pzr_A | 370 | Aspartate-semialdehyde dehydrogenase; NADP, oxidor | 92.26 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 91.83 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 91.79 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 91.62 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 91.6 | |
| 3uw3_A | 377 | Aspartate-semialdehyde dehydrogenase; structural g | 91.5 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 91.48 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 91.48 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 91.39 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 91.34 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 91.18 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 91.16 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 91.12 | |
| 1t4b_A | 367 | Aspartate-semialdehyde dehydrogenase; asadh, HOSR, | 90.87 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 90.78 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 90.55 | |
| 1vkn_A | 351 | N-acetyl-gamma-glutamyl-phosphate reductase; TM178 | 90.52 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 90.49 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 90.32 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 90.11 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 89.99 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 89.9 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 89.83 | |
| 4gsl_A | 615 | Ubiquitin-like modifier-activating enzyme ATG7; ub | 89.74 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 89.65 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 89.56 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 89.05 | |
| 3vh1_A | 598 | Ubiquitin-like modifier-activating enzyme ATG7; au | 89.05 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 88.82 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 88.61 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 88.59 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 88.48 | |
| 1tt5_A | 531 | APPBP1, amyloid protein-binding protein 1; cell cy | 88.2 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 88.13 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 87.82 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 87.73 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 87.67 | |
| 2d4a_B | 308 | Malate dehydrogenase; archaea, hyperthermophIle, o | 87.65 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 87.47 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 87.34 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 87.32 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 87.31 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 87.1 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 87.07 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 86.85 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 86.82 | |
| 1tt5_B | 434 | Ubiquitin-activating enzyme E1C isoform 1; cell cy | 86.79 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 86.3 | |
| 1lld_A | 319 | L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N | 86.11 | |
| 2nvu_B | 805 | Maltose binding protein/NEDD8-activating enzyme E1 | 86.02 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 85.95 | |
| 4dpl_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 85.9 | |
| 4dpk_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 85.9 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 85.75 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 85.71 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 85.68 | |
| 3cmm_A | 1015 | Ubiquitin-activating enzyme E1 1; UBA1, protein tu | 85.62 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 85.5 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 85.39 | |
| 2i6t_A | 303 | Ubiquitin-conjugating enzyme E2-like isoform A; L- | 84.9 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 84.51 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 84.29 | |
| 3ijp_A | 288 | DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, | 83.99 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 83.88 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 83.65 | |
| 1a4i_A | 301 | Methylenetetrahydrofolate dehydrogenase / methenyl | 83.43 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 83.35 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 83.32 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 82.98 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 82.87 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 82.63 | |
| 2duw_A | 145 | Putative COA-binding protein; ligand binding prote | 82.61 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 82.54 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 82.46 | |
| 1hyh_A | 309 | L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 | 82.26 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 82.23 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 82.22 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 81.88 | |
| 2c2x_A | 281 | Methylenetetrahydrofolate dehydrogenase- methenylt | 81.8 | |
| 2yv3_A | 331 | Aspartate-semialdehyde dehydrogenase; aspartate pa | 81.7 | |
| 3hsk_A | 381 | Aspartate-semialdehyde dehydrogenase; candida albi | 81.45 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 81.31 | |
| 3dfz_A | 223 | SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase | 81.3 | |
| 1b0a_A | 288 | Protein (fold bifunctional protein); folate, dehyd | 81.19 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 81.15 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 81.04 | |
| 1ys4_A | 354 | Aspartate-semialdehyde dehydrogenase; oxidoreducta | 80.9 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 80.89 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 80.79 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 80.75 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 80.58 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 80.57 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 80.47 | |
| 3cmm_A | 1015 | Ubiquitin-activating enzyme E1 1; UBA1, protein tu | 80.38 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 80.36 |
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-32 Score=281.50 Aligned_cols=269 Identities=19% Similarity=0.240 Sum_probs=207.0
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCccc-HHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS-AALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~-~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
..+++|+|||||||||||++|+++|++.| .+|++++|...... ..+.+. ...+ .....+
T Consensus 21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~-------------~~~~----~~~~~~ 80 (351)
T 3ruf_A 21 LIFSPKTWLITGVAGFIGSNLLEKLLKLN---QVVIGLDNFSTGHQYNLDEVK-------------TLVS----TEQWSR 80 (351)
T ss_dssp HHHSCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCHHHHHHHH-------------HTSC----HHHHTT
T ss_pred CCCCCCeEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCCCCchhhhhhhh-------------hccc----cccCCc
Confidence 34678999999999999999999999998 78899999765432 112211 1000 000168
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecc
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa 163 (570)
+.++.+|++ +.+....+++++|+|||+||..... +.....+++|+.|+.+++++|++. ++++|||+||+
T Consensus 81 ~~~~~~Dl~-------d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~ 152 (351)
T 3ruf_A 81 FCFIEGDIR-------DLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNA-QVQSFTYAASS 152 (351)
T ss_dssp EEEEECCTT-------CHHHHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEG
T ss_pred eEEEEccCC-------CHHHHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEecH
Confidence 999999999 5555668889999999999976543 345667899999999999999997 79999999999
Q ss_pred eeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHH
Q 008324 164 YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (570)
Q Consensus 164 ~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~ 243 (570)
.+++...+ .++.|+.+. .+.+.|+.||..+|.+++
T Consensus 153 ~vyg~~~~----~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~ 187 (351)
T 3ruf_A 153 STYGDHPA----LPKVEENIG-----------------------------------------NPLSPYAVTKYVNEIYAQ 187 (351)
T ss_dssp GGGTTCCC----SSBCTTCCC-----------------------------------------CCCSHHHHHHHHHHHHHH
T ss_pred HhcCCCCC----CCCccCCCC-----------------------------------------CCCChhHHHHHHHHHHHH
Confidence 99987542 222222221 345889999999999998
Q ss_pred Hh--ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhC
Q 008324 244 QS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAK 321 (570)
Q Consensus 244 ~~--~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~ 321 (570)
.+ ..+++++|+||+.|||+...+...+. .....++..+..|....++++++...++|||||+|++++.++....
T Consensus 188 ~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~- 263 (351)
T 3ruf_A 188 VYARTYGFKTIGLRYFNVFGRRQDPNGAYA---AVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKD- 263 (351)
T ss_dssp HHHHHHCCCCEEEEECSEESTTCCCCSTTC---CHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCG-
T ss_pred HHHHHhCCCEEEEeeCceeCcCCCCCcchh---hHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhcc-
Confidence 76 34899999999999998775432221 2234556667778777888999999999999999999998886311
Q ss_pred CCCCCceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 322 QPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 322 ~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
...+++||++++ .++|+.|+++.+.+.++..+
T Consensus 264 -~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 295 (351)
T 3ruf_A 264 -SAKDNIYNVAVG--DRTTLNELSGYIYDELNLIH 295 (351)
T ss_dssp -GGCSEEEEESCS--CCEEHHHHHHHHHHHHHTTC
T ss_pred -ccCCCEEEeCCC--CcccHHHHHHHHHHHhCccc
Confidence 123789999998 89999999999999999854
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-31 Score=275.95 Aligned_cols=260 Identities=22% Similarity=0.281 Sum_probs=197.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.++|+|||||||||||++|+++|++.|+++ +|+++.|....... +++. .. ....++.+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~-~v~~~~~~~~~~~~-~~l~-------------~~-------~~~~~~~~ 79 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETY-KIINFDALTYSGNL-NNVK-------------SI-------QDHPNYYF 79 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTE-EEEEEECCCTTCCG-GGGT-------------TT-------TTCTTEEE
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCc-EEEEEeccccccch-hhhh-------------hh-------ccCCCeEE
Confidence 567899999999999999999999998653 67777776532211 1111 00 01258999
Q ss_pred EeccCCCCCCCCCchhhHHHHhCC--ccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecce
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~--vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~ 164 (570)
+.+|++ +.+....++++ +|+|||+||..... +.....+++|+.||.+++++|++. ++++|||+||++
T Consensus 80 ~~~Dl~-------d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~~ 151 (346)
T 4egb_A 80 VKGEIQ-------NGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY-PHIKLVQVSTDE 151 (346)
T ss_dssp EECCTT-------CHHHHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHS-TTSEEEEEEEGG
T ss_pred EEcCCC-------CHHHHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeCchH
Confidence 999999 45555677776 99999999987544 455677999999999999999997 889999999999
Q ss_pred eecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHH
Q 008324 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (570)
Q Consensus 165 v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~ 244 (570)
+++... ...++.|+.+. .+.+.|+.||..+|.++.+
T Consensus 152 vy~~~~---~~~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~ 187 (346)
T 4egb_A 152 VYGSLG---KTGRFTEETPL-----------------------------------------APNSPYSSSKASADMIALA 187 (346)
T ss_dssp GGCCCC---SSCCBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHH
T ss_pred HhCCCC---cCCCcCCCCCC-----------------------------------------CCCChhHHHHHHHHHHHHH
Confidence 998742 11222222221 3457899999999999998
Q ss_pred h--ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCC
Q 008324 245 S--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQ 322 (570)
Q Consensus 245 ~--~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~ 322 (570)
+ ..+++++|+||+.|||+...+. .....++..+..|....++++++...++|||+|+|++++.++....
T Consensus 188 ~~~~~g~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-- 258 (346)
T 4egb_A 188 YYKTYQLPVIVTRCSNNYGPYQYPE-------KLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR-- 258 (346)
T ss_dssp HHHHHCCCEEEEEECEEESTTCCTT-------SHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC--
T ss_pred HHHHhCCCEEEEeecceeCcCCCcc-------chHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC--
Confidence 7 3489999999999999876321 2344566677778777778999999999999999999999886432
Q ss_pred CCCCceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 323 PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 323 ~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
.+++||++++ +++++.|+++.+.+.++..+
T Consensus 259 --~g~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 288 (346)
T 4egb_A 259 --VGEVYNIGGN--NEKTNVEVVEQIITLLGKTK 288 (346)
T ss_dssp --TTCEEEECCS--CCEEHHHHHHHHHHHHTCCG
T ss_pred --CCCEEEECCC--CceeHHHHHHHHHHHhCCCc
Confidence 3689999998 88999999999999998754
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.98 E-value=7e-31 Score=268.82 Aligned_cols=244 Identities=17% Similarity=0.147 Sum_probs=195.8
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|||||||||||++|+++|++.| .+|+++.|+..... .+++.++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~------------------------------~~~~~~~~ 48 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDG---NTPIILTRSIGNKA------------------------------INDYEYRV 48 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCCC-----------------------------------CCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCC---CEEEEEeCCCCccc------------------------------CCceEEEE
Confidence 4799999999999999999999998 68899999832210 13678999
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCCc
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~g 171 (570)
+|++ + ++ ...+++++|+|||+||..... .....+++|+.|+.+++++|++. ++++|||+||.++++...+
T Consensus 49 ~Dl~-~------~~-~~~~~~~~d~Vih~a~~~~~~-~~~~~~~~n~~~~~~ll~a~~~~-~~~r~v~~SS~~vyg~~~~ 118 (311)
T 3m2p_A 49 SDYT-L------ED-LINQLNDVDAVVHLAATRGSQ-GKISEFHDNEILTQNLYDACYEN-NISNIVYASTISAYSDETS 118 (311)
T ss_dssp CCCC-H------HH-HHHHTTTCSEEEECCCCCCSS-SCGGGTHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGCCCGGG
T ss_pred cccc-H------HH-HHHhhcCCCEEEEccccCCCC-ChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccHHHhCCCCC
Confidence 9998 4 33 357788999999999987765 45567899999999999999997 8999999999999986432
Q ss_pred ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--ccCC
Q 008324 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KENL 249 (570)
Q Consensus 172 ~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~~~l 249 (570)
.++.|+.+. .+.+.|+.||..+|+++.++ ..++
T Consensus 119 ----~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~~~~~~g~ 153 (311)
T 3m2p_A 119 ----LPWNEKELP-----------------------------------------LPDLMYGVSKLACEHIGNIYSRKKGL 153 (311)
T ss_dssp ----CSBCTTSCC-----------------------------------------CCSSHHHHHHHHHHHHHHHHHHHSCC
T ss_pred ----CCCCCCCCC-----------------------------------------CCCchhHHHHHHHHHHHHHHHHHcCC
Confidence 222222221 34688999999999999987 3689
Q ss_pred cEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceE
Q 008324 250 SLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIY 329 (570)
Q Consensus 250 p~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iy 329 (570)
+++|+||+.|||+...+. .....++..+..|....++++++...++|+++|+|++++.++.... .+++|
T Consensus 154 ~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~----~~~~~ 222 (311)
T 3m2p_A 154 CIKNLRFAHLYGFNEKNN-------YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK----VSGTF 222 (311)
T ss_dssp EEEEEEECEEECSCC--C-------CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT----CCEEE
T ss_pred CEEEEeeCceeCcCCCCC-------CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC----CCCeE
Confidence 999999999999876431 3344566677778887888899999999999999999998875221 37899
Q ss_pred EecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 330 HVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 330 ni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
|++++ .++|+.|+++.+.+.++..+
T Consensus 223 ~i~~~--~~~s~~e~~~~i~~~~g~~~ 247 (311)
T 3m2p_A 223 NIGSG--DALTNYEVANTINNAFGNKD 247 (311)
T ss_dssp EECCS--CEECHHHHHHHHHHHTTCTT
T ss_pred EeCCC--CcccHHHHHHHHHHHhCCCC
Confidence 99998 89999999999999998764
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.98 E-value=5.5e-31 Score=275.48 Aligned_cols=263 Identities=19% Similarity=0.145 Sum_probs=200.8
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHH--hCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILR--VQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~--~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
-+++|+|||||||||||++|+++|++ .| .+|+++.|+........+..+. ..........+
T Consensus 7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g---~~V~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~~~ 69 (362)
T 3sxp_A 7 ELENQTILITGGAGFVGSNLAFHFQENHPK---AKVVVLDKFRSNTLFSNNRPSS--------------LGHFKNLIGFK 69 (362)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHCTT---SEEEEEECCCCC-------CCC--------------CCCGGGGTTCC
T ss_pred hcCCCEEEEECCCCHHHHHHHHHHHhhCCC---CeEEEEECCCccccccccchhh--------------hhhhhhccccC
Confidence 36789999999999999999999999 67 7889999976532111110000 00000111356
Q ss_pred eEEEeccCCCCCCCCCchhhHHHH-hCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecce
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEEL-WNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l-~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~ 164 (570)
+.++.+|++ +.+..+.+ ..++|+|||+||.... .+.++..+++|+.||.+++++|++. +++ |||+||++
T Consensus 70 ~~~~~~Dl~-------d~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~~~-~V~~SS~~ 140 (362)
T 3sxp_A 70 GEVIAADIN-------NPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSK-KAK-VIYASSAG 140 (362)
T ss_dssp SEEEECCTT-------CHHHHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHT-TCE-EEEEEEGG
T ss_pred ceEEECCCC-------CHHHHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHc-CCc-EEEeCcHH
Confidence 789999999 45555566 6789999999997764 3667888999999999999999987 677 99999999
Q ss_pred eecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHH
Q 008324 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (570)
Q Consensus 165 v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~ 244 (570)
++|...+.++|. .+. .+.+.|+.||+.+|.+++.
T Consensus 141 vyg~~~~~~~E~-----~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~ 174 (362)
T 3sxp_A 141 VYGNTKAPNVVG-----KNE-----------------------------------------SPENVYGFSKLCMDEFVLS 174 (362)
T ss_dssp GGCSCCSSBCTT-----SCC-----------------------------------------CCSSHHHHHHHHHHHHHHH
T ss_pred HhCCCCCCCCCC-----CCC-----------------------------------------CCCChhHHHHHHHHHHHHH
Confidence 998765433333 211 3468899999999999999
Q ss_pred hccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCC
Q 008324 245 SKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (570)
Q Consensus 245 ~~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 324 (570)
+...++++++||+.|||+...+...+ ......++..+..|....++++++...++|+|+|+|++++.++... .
T Consensus 175 ~~~~~~~~~lR~~~v~Gp~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~----~ 247 (362)
T 3sxp_A 175 HSNDNVQVGLRYFNVYGPREFYKEKT---ASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQ----K 247 (362)
T ss_dssp TTTTSCEEEEEECSEESTTCGGGGGG---SCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCS----S
T ss_pred HhccCCEEEEEeCceeCcCCCCCCcc---hhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcC----C
Confidence 86569999999999999876432211 1234456667777877777788889999999999999999988521 2
Q ss_pred CCceEEecCCCCCcccHHHHHHHHhhhcc
Q 008324 325 DANIYHVGSSLRNPVTLVSILDYGFVYFT 353 (570)
Q Consensus 325 ~~~iyni~s~~~~pit~~~l~~~i~~~~~ 353 (570)
.+ +||++++ .++++.|+++.+.+.++
T Consensus 248 ~g-~~~i~~~--~~~s~~e~~~~i~~~~g 273 (362)
T 3sxp_A 248 SG-VYNVGYS--QARSYNEIVSILKEHLG 273 (362)
T ss_dssp CE-EEEESCS--CEEEHHHHHHHHHHHHC
T ss_pred CC-EEEeCCC--CCccHHHHHHHHHHHcC
Confidence 25 9999998 89999999999999998
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.98 E-value=6e-31 Score=276.00 Aligned_cols=270 Identities=17% Similarity=0.185 Sum_probs=203.3
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHh-CCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~-~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.+++|+|||||||||||++|+++|++. + .+|+++.|+....... . ...++
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g---~~V~~~~r~~~~~~~~---~-----------------------~~~~v 71 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILETTD---WEVFGMDMQTDRLGDL---V-----------------------KHERM 71 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHHSS---CEEEEEESCCTTTGGG---G-----------------------GSTTE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCC---CEEEEEeCChhhhhhh---c-----------------------cCCCe
Confidence 466799999999999999999999998 7 6889999986432110 0 02689
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecce
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~ 164 (570)
.++.+|+++ +.+....+++++|+|||+||..... +.....+++|+.|+.+++++|++. + ++|||+||+.
T Consensus 72 ~~~~~Dl~~------d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~-~~~v~~SS~~ 143 (372)
T 3slg_A 72 HFFEGDITI------NKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTSE 143 (372)
T ss_dssp EEEECCTTT------CHHHHHHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHH-T-CEEEEECCGG
T ss_pred EEEeCccCC------CHHHHHHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHh-C-CcEEEeCcHH
Confidence 999999983 2334457778999999999987643 456677899999999999999997 5 8999999999
Q ss_pred eecCCCc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHH
Q 008324 165 VAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (570)
Q Consensus 165 v~~~~~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~ 243 (570)
+||...+ .+.|...+ .. ......+.+.|+.||..+|.+++
T Consensus 144 vyg~~~~~~~~e~~~~----~~-----------------------------------~~p~~~p~~~Y~~sK~~~E~~~~ 184 (372)
T 3slg_A 144 VYGMCADEQFDPDASA----LT-----------------------------------YGPINKPRWIYACSKQLMDRVIW 184 (372)
T ss_dssp GGBSCCCSSBCTTTCC----EE-----------------------------------ECCTTCTTHHHHHHHHHHHHHHH
T ss_pred HhCCCCCCCCCccccc----cc-----------------------------------cCCCCCCCCcHHHHHHHHHHHHH
Confidence 9987432 22332111 00 00001234689999999999999
Q ss_pred Hhcc-CCcEEEEecCceecCCCCCCCccccCcc-chHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhC
Q 008324 244 QSKE-NLSLVIIRPTVVSGTYKEPFPGWVEDLK-TINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAK 321 (570)
Q Consensus 244 ~~~~-~lp~~IvRPsiV~g~~~ep~~gw~~~~~-~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~ 321 (570)
++.. +++++|+||+.|||+...+..++..... ....++..+..|....++++++...++|+|+|+|++++.++.....
T Consensus 185 ~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~ 264 (372)
T 3slg_A 185 GYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSNG 264 (372)
T ss_dssp HHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGG
T ss_pred HHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcccC
Confidence 8733 8999999999999998754333222222 2344566677787778888889999999999999999999874321
Q ss_pred CCCCCceEEecC-CCCCcccHHHHHHHHhhhcccCCC
Q 008324 322 QPSDANIYHVGS-SLRNPVTLVSILDYGFVYFTKKPW 357 (570)
Q Consensus 322 ~~~~~~iyni~s-~~~~pit~~~l~~~i~~~~~~~p~ 357 (570)
. ..+++||+++ + +++|+.|+++.+.+.++..+.
T Consensus 265 ~-~~~~~~ni~~~~--~~~s~~e~~~~i~~~~g~~~~ 298 (372)
T 3slg_A 265 V-ATGKIYNIGNPN--NNFSVRELANKMLELAAEFPE 298 (372)
T ss_dssp T-TTTEEEEECCTT--CEEEHHHHHHHHHHHHHHCTT
T ss_pred c-CCCceEEeCCCC--CCccHHHHHHHHHHHhCCCcc
Confidence 1 2378999999 5 699999999999999987653
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.1e-31 Score=285.22 Aligned_cols=293 Identities=25% Similarity=0.340 Sum_probs=207.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCc-cEEEEEEcCCCcccHHHHHHHHHhhhh---hHHHHHhhhccccccccCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNV-KKLYLFVRAADIDSAALRFQNEVLAKD---VFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V-~~V~~lvR~~~~~~~~~rl~~~l~~~~---~f~~l~~~~~~~~~~~~~~ 85 (570)
.++|+|||||||||||++|+++|++.++ + .+|++++|++......+++.+ .+... +...+... ...
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~-~g~~V~~l~R~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~--------~~~ 140 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLD-VDGRLICLVRAESDEDARRRLEK-TFDSGDPELLRHFKEL--------AAD 140 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSC-TTCEEEEEECSSSHHHHHHHHHG-GGCSSCHHHHHHHHHH--------HTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCC-CCCEEEEEECCCCcHHHHHHHHH-HHHhcchhhhhhhhhh--------ccC
Confidence 5689999999999999999999999832 2 789999999887777777663 22221 11111111 136
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEeccee
Q 008324 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v 165 (570)
++.++.+|++++++|++.++. +.+++++|+|||+||.+++ +++...+++|+.||.+++++|++. ++++|||+||.++
T Consensus 141 ~v~~v~~Dl~~~~~gld~~~~-~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~Nv~gt~~ll~aa~~~-~~~~~V~iSS~~v 217 (478)
T 4dqv_A 141 RLEVVAGDKSEPDLGLDQPMW-RRLAETVDLIVDSAAMVNA-FPYHELFGPNVAGTAELIRIALTT-KLKPFTYVSTADV 217 (478)
T ss_dssp TEEEEECCTTSGGGGCCHHHH-HHHHHHCCEEEECCSSCSB-SSCCEEHHHHHHHHHHHHHHHTSS-SCCCEEEEEEGGG
T ss_pred ceEEEEeECCCcccCCCHHHH-HHHHcCCCEEEECccccCC-cCHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeehhh
Confidence 899999999999999976665 5788899999999999887 666677899999999999999986 8899999999999
Q ss_pred ecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008324 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (570)
Q Consensus 166 ~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (570)
++...+ .++.|+.+.++. ..++.....+++.|+.||+.+|.+++++
T Consensus 218 ~~~~~~----~~~~E~~~~~p~------------------------------~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 263 (478)
T 4dqv_A 218 GAAIEP----SAFTEDADIRVI------------------------------SPTRTVDGGWAGGYGTSKWAGEVLLREA 263 (478)
T ss_dssp GTTSCT----TTCCSSSCHHHH------------------------------CCEEECCTTSEECHHHHHHHHHHHHHHH
T ss_pred cCccCC----CCcCCccccccc------------------------------CcccccccccccchHHHHHHHHHHHHHH
Confidence 876321 223222221110 0011112245688999999999999987
Q ss_pred c--cCCcEEEEecCceecCCCCCCCccccCccchHHHHH-HHhcCCcee-eecC------CCeeeeeeehHHHHHHHHHH
Q 008324 246 K--ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFV-ASAQGNLRC-LVGE------TKVIMDVIPVDMVVNAMIVA 315 (570)
Q Consensus 246 ~--~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~-~~~~G~~~~-~~~~------~~~~~d~VpVDdva~aii~a 315 (570)
. .+++++|+||+.|||+.... ..|.. ......++. ....|..+. +++. ++...|+|||||+|++++.+
T Consensus 264 ~~~~gi~~~ivRpg~v~G~~~~~-g~~~~-~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~ 341 (478)
T 4dqv_A 264 NDLCALPVAVFRCGMILADTSYA-GQLNM-SDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVL 341 (478)
T ss_dssp HHHHCCCEEEEEECEEECCSSSS-SCCCT-TBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHH
T ss_pred HHHhCCCeEEEECceeeCCCccC-CcCCH-HHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHH
Confidence 3 48999999999999975411 00111 111222332 233454432 2222 26789999999999999999
Q ss_pred HHHhhC-CCCCCceEEecCCCCCcccHHHHHHHHhhh
Q 008324 316 MVAHAK-QPSDANIYHVGSSLRNPVTLVSILDYGFVY 351 (570)
Q Consensus 316 ~~~~~~-~~~~~~iyni~s~~~~pit~~~l~~~i~~~ 351 (570)
+..... ....+++||++++..++++|.|+++.+.++
T Consensus 342 ~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~ 378 (478)
T 4dqv_A 342 GARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA 378 (478)
T ss_dssp HHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT
T ss_pred HhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc
Confidence 864211 222368999999843349999999999986
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=270.61 Aligned_cols=258 Identities=17% Similarity=0.170 Sum_probs=193.6
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
++-.++|+|||||||||||++|+++|++.| .+|+++.|+... .+
T Consensus 14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G---~~V~~~~r~~~~---------------------------------~~ 57 (347)
T 4id9_A 14 LVPRGSHMILVTGSAGRVGRAVVAALRTQG---RTVRGFDLRPSG---------------------------------TG 57 (347)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHHTT---CCEEEEESSCCS---------------------------------SC
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHhCC---CEEEEEeCCCCC---------------------------------CC
Confidence 345678999999999999999999999998 677899987532 35
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccc-cHHHHHHHhHHHHHHHHHHHHHccCceEEEEEeccee
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDE-RYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~-~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v 165 (570)
+.++.+|++ +.+....+++++|+|||+||...... ..+..+++|+.|+.+++++|++. ++++|||+||+++
T Consensus 58 ~~~~~~Dl~-------d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~V~~SS~~v 129 (347)
T 4id9_A 58 GEEVVGSLE-------DGQALSDAIMGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAA-GVRRFVFASSGEV 129 (347)
T ss_dssp CSEEESCTT-------CHHHHHHHHTTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGG
T ss_pred ccEEecCcC-------CHHHHHHHHhCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHHH
Confidence 668899999 55556688889999999999876643 34778999999999999999996 8999999999999
Q ss_pred ecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008324 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (570)
Q Consensus 166 ~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (570)
|+.... ...++.|+.+. .+.+.|+.||..+|.+++.+
T Consensus 130 yg~~~~--~~~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~E~~~~~~ 166 (347)
T 4id9_A 130 YPENRP--EFLPVTEDHPL-----------------------------------------CPNSPYGLTKLLGEELVRFH 166 (347)
T ss_dssp TTTTSC--SSSSBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHH
T ss_pred hCCCCC--CCCCcCCCCCC-----------------------------------------CCCChHHHHHHHHHHHHHHH
Confidence 986311 11222222211 34678999999999999876
Q ss_pred --ccCCcEEEEecCcee-------------cCCCCCCCcccc----CccchHHHHHHHhcCCceeeecCCCeeeee----
Q 008324 246 --KENLSLVIIRPTVVS-------------GTYKEPFPGWVE----DLKTINTLFVASAQGNLRCLVGETKVIMDV---- 302 (570)
Q Consensus 246 --~~~lp~~IvRPsiV~-------------g~~~ep~~gw~~----~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~---- 302 (570)
..+++++|+||+.|| |+...+.+.+.+ .-.....++.....|....++++++...++
T Consensus 167 ~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 246 (347)
T 4id9_A 167 QRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMHI 246 (347)
T ss_dssp HHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEECE
T ss_pred HHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccCc
Confidence 458999999999999 543211000000 012233455566777766778888888899
Q ss_pred eehHHHHHHHHHHHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
++|+|+|++++.++..... .+++||++++ .++|+.|+++.+.+.++..+
T Consensus 247 i~v~Dva~ai~~~~~~~~~---~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 295 (347)
T 4id9_A 247 TDTRDMVAGILLALDHPEA---AGGTFNLGAD--EPADFAALLPKIAALTGLPI 295 (347)
T ss_dssp EEHHHHHHHHHHHHHCGGG---TTEEEEESCS--SCEEHHHHHHHHHHHHCCCE
T ss_pred EeHHHHHHHHHHHhcCccc---CCCeEEECCC--CcccHHHHHHHHHHHhCCCC
Confidence 9999999999999874321 2679999998 89999999999999998653
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=262.69 Aligned_cols=265 Identities=17% Similarity=0.164 Sum_probs=197.0
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccH-HHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA-ALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~-~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.+|+|||||||||||++|+++|++.| .+|+++.|....... .+++. .. ...++.+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~~-------------~~--------~~~~~~~ 59 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHG---YDVVIADNLVNSKREAIARIE-------------KI--------TGKTPAF 59 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECCCSSSCTHHHHHHH-------------HH--------HSCCCEE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCC---CcEEEEecCCcchHHHHHHHH-------------hh--------cCCCceE
Confidence 57899999999999999999999998 678999997654432 22221 11 1257889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecce
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~ 164 (570)
+.+|++ +.+..+.+++ ++|+|||+||..... +.....+++|+.|+.+++++|++. ++++|||+||+.
T Consensus 60 ~~~Dl~-------d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~ 131 (341)
T 3enk_A 60 HETDVS-------DERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRER-AVKRIVFSSSAT 131 (341)
T ss_dssp ECCCTT-------CHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGG
T ss_pred EEeecC-------CHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEecce
Confidence 999999 4555556766 799999999987542 345577899999999999999986 789999999999
Q ss_pred eecCCCc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHH
Q 008324 165 VAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (570)
Q Consensus 165 v~~~~~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~ 243 (570)
++|...+ .++|. .+. .+.+.|+.||+.+|.+++
T Consensus 132 ~~g~~~~~~~~e~-----~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~ 165 (341)
T 3enk_A 132 VYGVPERSPIDET-----FPL-----------------------------------------SATNPYGQTKLMAEQILR 165 (341)
T ss_dssp GBCSCSSSSBCTT-----SCC-----------------------------------------BCSSHHHHHHHHHHHHHH
T ss_pred EecCCCCCCCCCC-----CCC-----------------------------------------CCCChhHHHHHHHHHHHH
Confidence 9986432 22222 111 345789999999999998
Q ss_pred Hh---ccCCcEEEEecCceecCCCCCCCccccC--ccchHHHHHHHhcC--Cceeeec------CCCeeeeeeehHHHHH
Q 008324 244 QS---KENLSLVIIRPTVVSGTYKEPFPGWVED--LKTINTLFVASAQG--NLRCLVG------ETKVIMDVIPVDMVVN 310 (570)
Q Consensus 244 ~~---~~~lp~~IvRPsiV~g~~~ep~~gw~~~--~~~~~~~i~~~~~G--~~~~~~~------~~~~~~d~VpVDdva~ 310 (570)
.+ ..+++++++||+.|||+......|.... .......+.....| ....+++ +++..+|+|||||+|+
T Consensus 166 ~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~ 245 (341)
T 3enk_A 166 DVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLAR 245 (341)
T ss_dssp HHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHHHH
T ss_pred HHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHHHH
Confidence 76 2359999999999999865433332211 12333445544444 3334455 7889999999999999
Q ss_pred HHHHHHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 311 AMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
+++.++....... .+++||++++ +++|+.|+++.+.+.++..+
T Consensus 246 a~~~~~~~~~~~~-~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 288 (341)
T 3enk_A 246 GHIAALDALERRD-ASLTVNLGTG--RGYSVLEVVRAFEKASGRAV 288 (341)
T ss_dssp HHHHHHHHHHHHT-SCEEEEESCS--CCEEHHHHHHHHHHHHCSCC
T ss_pred HHHHHHHhhhcCC-cceEEEeCCC--CceeHHHHHHHHHHHhCCCc
Confidence 9999887421111 2689999998 89999999999999988754
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-30 Score=264.18 Aligned_cols=248 Identities=16% Similarity=0.192 Sum_probs=188.5
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|++.| .+|+++.|....... ....++.++.+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~---------------------------~~~~~~~~~~~ 50 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELG---YEVVVVDNLSSGRRE---------------------------FVNPSAELHVR 50 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEECCCSSCCGG---------------------------GSCTTSEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCC---CEEEEEeCCCCCchh---------------------------hcCCCceEEEC
Confidence 689999999999999999999998 678999987654311 01367889999
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCC
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f---~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~ 169 (570)
|++++ + ...++++ |+|||+||.... .+.+...+++|+.|+.+++++|++. ++++|||+||+.+|+..
T Consensus 51 Dl~d~-------~-~~~~~~~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~vyg~~ 120 (312)
T 3ko8_A 51 DLKDY-------S-WGAGIKG-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQT-GVRTVVFASSSTVYGDA 120 (312)
T ss_dssp CTTST-------T-TTTTCCC-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSC
T ss_pred ccccH-------H-HHhhcCC-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeCcHHHhCCC
Confidence 99964 3 2344555 999999996532 3456778999999999999999987 78999999999999875
Q ss_pred Cc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--c
Q 008324 170 TG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--K 246 (570)
Q Consensus 170 ~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~ 246 (570)
.+ .++|. .+. .+.+.|+.||..+|.+++.+ .
T Consensus 121 ~~~~~~e~-----~~~-----------------------------------------~p~~~Y~~sK~~~e~~~~~~~~~ 154 (312)
T 3ko8_A 121 DVIPTPEE-----EPY-----------------------------------------KPISVYGAAKAAGEVMCATYARL 154 (312)
T ss_dssp SSSSBCTT-----SCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCC-----CCC-----------------------------------------CCCChHHHHHHHHHHHHHHHHHH
Confidence 42 22222 211 34578999999999999887 3
Q ss_pred cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcC-CceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCC
Q 008324 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQG-NLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G-~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~ 325 (570)
.+++++++||+.|||+...+ .....++..+..+ .....+++++...++||++|+|++++.++.........
T Consensus 155 ~g~~~~~lrp~~v~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~ 226 (312)
T 3ko8_A 155 FGVRCLAVRYANVVGPRLRH--------GVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAP 226 (312)
T ss_dssp HCCEEEEEEECEEECTTCCS--------SHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCS
T ss_pred hCCCEEEEeeccccCcCCCC--------ChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCC
Confidence 48999999999999986532 2233445555555 34456788889999999999999999998752212223
Q ss_pred CceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 326 ANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 326 ~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
+++||++++ .++++.|+++.+.+.++..|
T Consensus 227 ~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 255 (312)
T 3ko8_A 227 FLALNVGNV--DAVRVLDIAQIVAEVLGLRP 255 (312)
T ss_dssp EEEEEESCS--SCEEHHHHHHHHHHHHTCCC
T ss_pred CcEEEEcCC--CceeHHHHHHHHHHHhCCCC
Confidence 689999998 89999999999999998765
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-29 Score=259.98 Aligned_cols=257 Identities=16% Similarity=0.168 Sum_probs=188.6
Q ss_pred CcccHHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhcccccc
Q 008324 2 ELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNS 81 (570)
Q Consensus 2 ~~~~i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~ 81 (570)
+.+.-..+.+.++|||||||||||++|+++|++.| .+|+++.|+.....
T Consensus 2 ~~~~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r~~~~~~---------------------------- 50 (321)
T 2pk3_A 2 RGSHHHHHHGSMRALITGVAGFVGKYLANHLTEQN---VEVFGTSRNNEAKL---------------------------- 50 (321)
T ss_dssp -----------CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCTTCCC----------------------------
T ss_pred CCcccccccCcceEEEECCCChHHHHHHHHHHHCC---CEEEEEecCCcccc----------------------------
Confidence 33334456777899999999999999999999988 68899998754310
Q ss_pred ccCCceEEEeccCCCCCCCCCchhhHHHHhCC--ccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceE
Q 008324 82 FISEKITFVPGDISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKV 156 (570)
Q Consensus 82 ~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~--vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~ 156 (570)
-++.++.+|++ +.+..+.++++ +|+|||+||..... +.++..+++|+.|+.+++++|++++++++
T Consensus 51 ---l~~~~~~~Dl~-------d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~ 120 (321)
T 2pk3_A 51 ---PNVEMISLDIM-------DSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCR 120 (321)
T ss_dssp ---TTEEEEECCTT-------CHHHHHHHHHHHCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCE
T ss_pred ---ceeeEEECCCC-------CHHHHHHHHHhcCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence 15778999999 44445566664 99999999987532 35778899999999999999987756899
Q ss_pred EEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHH
Q 008324 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (570)
Q Consensus 157 ~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
|||+||..+++... ....+++|+++. .+.+.|+.||+
T Consensus 121 iv~~SS~~v~g~~~--~~~~~~~E~~~~-----------------------------------------~~~~~Y~~sK~ 157 (321)
T 2pk3_A 121 ILTIGSSEEYGMIL--PEESPVSEENQL-----------------------------------------RPMSPYGVSKA 157 (321)
T ss_dssp EEEEEEGGGTBSCC--GGGCSBCTTSCC-----------------------------------------BCCSHHHHHHH
T ss_pred EEEEccHHhcCCCC--CCCCCCCCCCCC-----------------------------------------CCCCccHHHHH
Confidence 99999999988631 011222222211 23578999999
Q ss_pred HHHHHHHHhc--cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhc---C--CceeeecCCCeeeeeeehHHHH
Q 008324 237 MGEMLMQQSK--ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQ---G--NLRCLVGETKVIMDVIPVDMVV 309 (570)
Q Consensus 237 ~aE~lv~~~~--~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~---G--~~~~~~~~~~~~~d~VpVDdva 309 (570)
.+|.+++.+. .+++++++||+.|||+...+ .+ ....++..+.. | .....+++++...++++++|+|
T Consensus 158 ~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~-~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva 230 (321)
T 2pk3_A 158 SVGMLARQYVKAYGMDIIHTRTFNHIGPGQSL-GF------VTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIV 230 (321)
T ss_dssp HHHHHHHHHHHHHCCEEEEEEECEEECTTCCT-TS------HHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEEeCcccCcCCCC-Cc------hHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHH
Confidence 9999998762 48999999999999987632 11 12233333333 6 3445678888899999999999
Q ss_pred HHHHHHHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 310 NAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
++++.++... . .+++||++++ .++++.|+++.+.+.++..
T Consensus 231 ~a~~~~~~~~--~--~g~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 270 (321)
T 2pk3_A 231 QAYWLLSQYG--K--TGDVYNVCSG--IGTRIQDVLDLLLAMANVK 270 (321)
T ss_dssp HHHHHHHHHC--C--TTCEEEESCS--CEEEHHHHHHHHHHHSSSC
T ss_pred HHHHHHHhCC--C--CCCeEEeCCC--CCeeHHHHHHHHHHHhCCC
Confidence 9999988643 1 2679999998 8999999999999998864
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-29 Score=263.20 Aligned_cols=267 Identities=18% Similarity=0.200 Sum_probs=199.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCccc-HHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS-AALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~-~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+++|+|||||||||||++|+++|++.| .+|+++.|+..+.. ..+.+.++ +... ...++.
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~---------~~~~--------~~~~~~ 84 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLD---QKVVGLDNFATGHQRNLDEVRSL---------VSEK--------QWSNFK 84 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCHHHHHHHHHH---------SCHH--------HHTTEE
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCCccchhhHHHHhhh---------cccc--------cCCceE
Confidence 678999999999999999999999988 68899999764321 11221110 0000 015788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEeccee
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v 165 (570)
++.+|++ +.+....+++++|+|||+||..... +.++..+++|+.|+.+++++|++. ++++|||+||.++
T Consensus 85 ~~~~Dl~-------d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~ 156 (352)
T 1sb8_A 85 FIQGDIR-------NLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAASSST 156 (352)
T ss_dssp EEECCTT-------SHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGG
T ss_pred EEECCCC-------CHHHHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHh
Confidence 9999999 4555567888999999999986532 456778999999999999999986 8899999999999
Q ss_pred ecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008324 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (570)
Q Consensus 166 ~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (570)
++...+ .++.|+++. .+.+.|+.||+.+|.+++.+
T Consensus 157 ~~~~~~----~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~~ 191 (352)
T 1sb8_A 157 YGDHPG----LPKVEDTIG-----------------------------------------KPLSPYAVTKYVNELYADVF 191 (352)
T ss_dssp GTTCCC----SSBCTTCCC-----------------------------------------CCCSHHHHHHHHHHHHHHHH
T ss_pred cCCCCC----CCCCCCCCC-----------------------------------------CCCChhHHHHHHHHHHHHHH
Confidence 986532 122221211 34578999999999999876
Q ss_pred --ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCC
Q 008324 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQP 323 (570)
Q Consensus 246 --~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~ 323 (570)
..+++++++||+.|||+...+...+. .....++..+..|....++++++...++++++|+|++++.++.....
T Consensus 192 ~~~~g~~~~ilRp~~v~G~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~-- 266 (352)
T 1sb8_A 192 SRCYGFSTIGLRYFNVFGRRQDPNGAYA---AVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLD-- 266 (352)
T ss_dssp HHHHCCCCEEEEECCEECTTCCCCSTTC---CHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGG--
T ss_pred HHHcCCCEEEEEECceeCcCCCCCcchh---hHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccc--
Confidence 34899999999999998764321111 11233455566677666788899999999999999999988753111
Q ss_pred CCCceEEecCCCCCcccHHHHHHHHhhhc---ccCC
Q 008324 324 SDANIYHVGSSLRNPVTLVSILDYGFVYF---TKKP 356 (570)
Q Consensus 324 ~~~~iyni~s~~~~pit~~~l~~~i~~~~---~~~p 356 (570)
..+++||++++ .++|+.|+++.+.+.+ +..+
T Consensus 267 ~~~~~~ni~~~--~~~s~~e~~~~i~~~~~~~g~~~ 300 (352)
T 1sb8_A 267 ARNQVYNIAVG--GRTSLNQLFFALRDGLAENGVSY 300 (352)
T ss_dssp GCSEEEEESCS--CCEEHHHHHHHHHHHHHHTTCCC
T ss_pred CCCceEEeCCC--CCccHHHHHHHHHHHHHhcCCCC
Confidence 12689999998 8999999999999998 6543
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-29 Score=261.06 Aligned_cols=258 Identities=24% Similarity=0.307 Sum_probs=191.7
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+|||||||||||++|+++|++.|++ .+|+++.|....... +.+. ++ . ...++.++
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~-~~V~~~~r~~~~~~~-~~~~-~~-------------~------~~~~~~~~ 59 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPD-WEVINIDKLGYGSNP-ANLK-DL-------------E------DDPRYTFV 59 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTT-CEEEEEECCCTTCCG-GGGT-TT-------------T------TCTTEEEE
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCC-CEEEEEecCcccCch-hHHh-hh-------------c------cCCceEEE
Confidence 4689999999999999999999998743 478889886522111 0110 00 0 02578899
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeec
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~ 167 (570)
.+|++ +.+..+.++.++|+|||+||....+ +.++..+++|+.|+.+++++|.+.+..++|||+||..++|
T Consensus 60 ~~Dl~-------d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg 132 (336)
T 2hun_A 60 KGDVA-------DYELVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYG 132 (336)
T ss_dssp ECCTT-------CHHHHHHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGC
T ss_pred EcCCC-------CHHHHHHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHC
Confidence 99999 4555557778999999999986532 4566789999999999999999873347999999999988
Q ss_pred CCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--
Q 008324 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (570)
Q Consensus 168 ~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~-- 245 (570)
...+ .+++|+.+. .+.+.|+.||+.+|.+++.+
T Consensus 133 ~~~~----~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~~~~ 167 (336)
T 2hun_A 133 DILK----GSFTENDRL-----------------------------------------MPSSPYSATKAASDMLVLGWTR 167 (336)
T ss_dssp CCSS----SCBCTTBCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCC----CCcCCCCCC-----------------------------------------CCCCccHHHHHHHHHHHHHHHH
Confidence 6421 122221111 34578999999999999876
Q ss_pred ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCC
Q 008324 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~ 325 (570)
..+++++++||+.|||+...+ . .....++..+..|....++++++...++++++|+|++++.++... . .
T Consensus 168 ~~~~~~~ilrp~~v~g~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~--~--~ 236 (336)
T 2hun_A 168 TYNLNASITRCTNNYGPYQFP-----E--KLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKG--E--S 236 (336)
T ss_dssp HTTCEEEEEEECEEESTTCCT-----T--SHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHC--C--T
T ss_pred HhCCCEEEEeeeeeeCcCCCc-----C--chHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCC--C--C
Confidence 358999999999999987532 1 122345555666766667788888999999999999999988632 2 3
Q ss_pred CceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 326 ANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 326 ~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
+++||++++ .++|+.|+++.+.+.++..
T Consensus 237 g~~~~v~~~--~~~s~~e~~~~i~~~~g~~ 264 (336)
T 2hun_A 237 REIYNISAG--EEKTNLEVVKIILRLMGKG 264 (336)
T ss_dssp TCEEEECCS--CEECHHHHHHHHHHHTTCC
T ss_pred CCEEEeCCC--CcccHHHHHHHHHHHhCCC
Confidence 679999998 8899999999999998875
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-30 Score=262.91 Aligned_cols=250 Identities=14% Similarity=0.089 Sum_probs=187.6
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
++++|+|||||||||||++|+++|++.|. +.... ...+.
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~---------~~~~~--------------------------------~~~~~ 41 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVADGAG---------LPGED--------------------------------WVFVS 41 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHTTTC---------CTTCE--------------------------------EEECC
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhcCC---------ccccc--------------------------------ccccC
Confidence 46789999999999999999999999873 11100 12344
Q ss_pred EEeccCCCCCCCCCchhhHHHHhCC--ccEEEEcCccCCc----cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEec
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKF----DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~--vdiViH~AA~v~f----~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vST 162 (570)
.+.+|++ +.+....++++ +|+|||+||.+.. .+.....+++|+.||.+++++|++. ++++|||+||
T Consensus 42 ~~~~D~~-------d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~v~~SS 113 (319)
T 4b8w_A 42 SKDADLT-------DTAQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEV-GARKVVSCLS 113 (319)
T ss_dssp TTTCCTT-------SHHHHHHHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEECC
T ss_pred ceecccC-------CHHHHHHHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEEcc
Confidence 5679998 45555566665 9999999998652 3456778999999999999999997 7999999999
Q ss_pred ceeecCCCc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc-hHHHHHHHHHH
Q 008324 163 AYVAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN-TYVFTKTMGEM 240 (570)
Q Consensus 163 a~v~~~~~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n-~Y~~sK~~aE~ 240 (570)
+++|+...+ .++|..... .+ ..+.+ .|+.||..+|.
T Consensus 114 ~~vyg~~~~~~~~E~~~~~-~~-----------------------------------------~~p~~~~Y~~sK~~~E~ 151 (319)
T 4b8w_A 114 TCIFPDKTTYPIDETMIHN-GP-----------------------------------------PHNSNFGYSYAKRMIDV 151 (319)
T ss_dssp GGGSCSSCCSSBCGGGGGB-SC-----------------------------------------CCSSSHHHHHHHHHHHH
T ss_pred hhhcCCCCCCCcccccccc-CC-----------------------------------------CCCCcchHHHHHHHHHH
Confidence 999986432 233321000 00 01223 59999999999
Q ss_pred HHHHh--ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHH----HhcCCceeeecCCCeeeeeeehHHHHHHHHH
Q 008324 241 LMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVA----SAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (570)
Q Consensus 241 lv~~~--~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~----~~~G~~~~~~~~~~~~~d~VpVDdva~aii~ 314 (570)
+++.+ ..+++++|+||+.|||+...+..... .....++.. +..|....++++++...++|||+|+|++++.
T Consensus 152 ~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~ 228 (319)
T 4b8w_A 152 QNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDG---HVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIW 228 (319)
T ss_dssp HHHHHHHHHCCEEEEEEECEEECTTCCCCTTTS---CHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHH
T ss_pred HHHHHHHhhCCCEEEEeeccccCCCCCCCCccc---cccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHH
Confidence 99876 35899999999999998764322111 122233333 5677777788999999999999999999999
Q ss_pred HHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 315 AMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 315 a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
++..... ..+++||++++ .++|+.|+++.+.+.++..+
T Consensus 229 ~~~~~~~--~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 266 (319)
T 4b8w_A 229 VLREYNE--VEPIILSVGEE--DEVSIKEAAEAVVEAMDFHG 266 (319)
T ss_dssp HHHHCCC--SSCEEECCCGG--GCEEHHHHHHHHHHHTTCCS
T ss_pred HHhcccc--CCceEEEecCC--CceeHHHHHHHHHHHhCCCC
Confidence 9874222 23679999998 89999999999999998654
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-29 Score=264.40 Aligned_cols=263 Identities=15% Similarity=0.161 Sum_probs=194.8
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
+++++|+|||||||||||++|+++|++.| .+|+++.|+......... . +. ...++
T Consensus 5 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~---~---------~~----------~~~~~ 59 (357)
T 1rkx_A 5 SFWQGKRVFVTGHTGFKGGWLSLWLQTMG---ATVKGYSLTAPTVPSLFE---T---------AR----------VADGM 59 (357)
T ss_dssp HHHTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCSSSSCHHH---H---------TT----------TTTTS
T ss_pred hhhCCCEEEEECCCchHHHHHHHHHHhCC---CeEEEEeCCCcccchhhH---h---------hc----------cCCce
Confidence 57889999999999999999999999988 688999997654321110 0 00 02578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhCC--ccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEec
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~--vdiViH~AA~v~f---~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vST 162 (570)
.++.+|+++ .+....++++ +|+|||+||.... .+.+...+++|+.|+.+++++|++++++++|||+||
T Consensus 60 ~~~~~Dl~d-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 132 (357)
T 1rkx_A 60 QSEIGDIRD-------QNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITS 132 (357)
T ss_dssp EEEECCTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECC
T ss_pred EEEEccccC-------HHHHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecC
Confidence 899999994 4445566665 8999999996432 245667899999999999999999744899999999
Q ss_pred ceeecCCCc--ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHH
Q 008324 163 AYVAGERTG--LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (570)
Q Consensus 163 a~v~~~~~g--~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~ 240 (570)
.++||...+ .+.|. ++. .+.+.|+.||..+|+
T Consensus 133 ~~vyg~~~~~~~~~E~-----~~~-----------------------------------------~~~~~Y~~sK~~~e~ 166 (357)
T 1rkx_A 133 DKCYDNKEWIWGYREN-----EAM-----------------------------------------GGYDPYSNSKGCAEL 166 (357)
T ss_dssp GGGBCCCCSSSCBCTT-----SCB-----------------------------------------CCSSHHHHHHHHHHH
T ss_pred HHHhCCCCcCCCCCCC-----CCC-----------------------------------------CCCCccHHHHHHHHH
Confidence 999986532 12221 111 345789999999999
Q ss_pred HHHHhc-----------cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHH
Q 008324 241 LMQQSK-----------ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (570)
Q Consensus 241 lv~~~~-----------~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
+++.+. .+++++++||+.|||+...+. -.....++..+..|....+ ++++...++|||+|+|
T Consensus 167 ~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~------~~~~~~~~~~~~~g~~~~~-~~~~~~~~~v~v~Dva 239 (357)
T 1rkx_A 167 VTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL------DRIVPDILRAFEQSQPVII-RNPHAIRPWQHVLEPL 239 (357)
T ss_dssp HHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS------SCHHHHHHHHHHTTCCEEC-SCTTCEECCEETHHHH
T ss_pred HHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCcc------ccHHHHHHHHHhcCCCEEE-CCCCCeeccEeHHHHH
Confidence 998762 289999999999999865221 1223345556666665443 4567889999999999
Q ss_pred HHHHHHHHHhh-CCCCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 310 NAMIVAMVAHA-KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 310 ~aii~a~~~~~-~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
++++.++.... .....+++||++++...++|+.|+++.+.+.++..
T Consensus 240 ~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~ 286 (357)
T 1rkx_A 240 SGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEG 286 (357)
T ss_dssp HHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCC
Confidence 99998886421 11112579999974226899999999999998764
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-29 Score=256.46 Aligned_cols=257 Identities=20% Similarity=0.253 Sum_probs=191.0
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|++.| .+|+++.|...... +. ...++.++.+
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~--~~-------------------------~~~~~~~~~~ 51 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEG---LSVVVVDNLQTGHE--DA-------------------------ITEGAKFYNG 51 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCG--GG-------------------------SCTTSEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC---CEEEEEeCCCcCch--hh-------------------------cCCCcEEEEC
Confidence 689999999999999999999988 67889998754321 00 1236889999
Q ss_pred cCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeec
Q 008324 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~ 167 (570)
|++ +.+..+.+++ ++|+|||+||..... +.++..+++|+.|+.+++++|++. ++++|||+||..+++
T Consensus 52 D~~-------~~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~ 123 (330)
T 2c20_A 52 DLR-------DKAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEF-KVDKFIFSSTAATYG 123 (330)
T ss_dssp CTT-------CHHHHHHHHHHSCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGGC
T ss_pred CCC-------CHHHHHHHHhhcCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHc-CCCEEEEeCCceeeC
Confidence 999 4454556776 899999999987543 456778999999999999999986 789999999999998
Q ss_pred CCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--
Q 008324 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (570)
Q Consensus 168 ~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~-- 245 (570)
...+ .+++|+++. .+.+.|+.||..+|.+++.+
T Consensus 124 ~~~~----~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~~~~ 158 (330)
T 2c20_A 124 EVDV----DLITEETMT-----------------------------------------NPTNTYGETKLAIEKMLHWYSQ 158 (330)
T ss_dssp SCSS----SSBCTTSCC-----------------------------------------CCSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCC----CCCCcCCCC-----------------------------------------CCCChHHHHHHHHHHHHHHHHH
Confidence 6431 222222221 23578999999999999876
Q ss_pred ccCCcEEEEecCceecCCCCCCCcccc-CccchHHHHHHHhcC--Cceeeec------CCCeeeeeeehHHHHHHHHHHH
Q 008324 246 KENLSLVIIRPTVVSGTYKEPFPGWVE-DLKTINTLFVASAQG--NLRCLVG------ETKVIMDVIPVDMVVNAMIVAM 316 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~ep~~gw~~-~~~~~~~~i~~~~~G--~~~~~~~------~~~~~~d~VpVDdva~aii~a~ 316 (570)
..+++++++||+.|||+......|..+ ........+.....| ....+++ +++...++|||+|+|++++.++
T Consensus 159 ~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~ 238 (330)
T 2c20_A 159 ASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGL 238 (330)
T ss_dssp TSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHHHHH
T ss_pred HhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHHHHH
Confidence 348999999999999986432222111 112233334443333 3334444 6778999999999999999988
Q ss_pred HHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 317 VAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 317 ~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
...... ..+++||++++ .++|+.|+++.+.+.++..
T Consensus 239 ~~~~~~-~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 274 (330)
T 2c20_A 239 KDLQNG-GESDFYNLGNG--NGFSVKEIVDAVREVTNHE 274 (330)
T ss_dssp HHHHTT-CCCEEEECCCT--TCBCHHHHHHHHHHHTTSC
T ss_pred hccccC-CCCCeEEeCCC--CCccHHHHHHHHHHHhCCC
Confidence 743221 12579999998 8899999999999998764
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-29 Score=258.17 Aligned_cols=245 Identities=18% Similarity=0.221 Sum_probs=187.0
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|++.| ..|.+..|+..... ....++.++.+
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g---~~v~~~~~~~~~~~----------------------------~~~~~~~~~~~ 50 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN---EIVVIDNLSSGNEE----------------------------FVNEAARLVKA 50 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS---CEEEECCCSSCCGG----------------------------GSCTTEEEECC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC---CEEEEEcCCCCChh----------------------------hcCCCcEEEEC
Confidence 589999999999999999999987 33333333332211 01367889999
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCC
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f---~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~ 169 (570)
|++ +++ ...+++++|+|||+||.... .+.++..+++|+.|+.+++++|++. ++++|||+||..+||..
T Consensus 51 Dl~-------~~~-~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~iv~~SS~~vyg~~ 121 (313)
T 3ehe_A 51 DLA-------ADD-IKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKA-GVSRIVFTSTSTVYGEA 121 (313)
T ss_dssp CTT-------TSC-CHHHHTTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGGCSC
T ss_pred cCC-------hHH-HHHHhcCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeCchHHhCcC
Confidence 998 422 34677899999999996532 3567888999999999999999986 78999999999999864
Q ss_pred CcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--cc
Q 008324 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KE 247 (570)
Q Consensus 170 ~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~~ 247 (570)
.+ .+++|+.+. .+.+.|+.||..+|.+++.+ ..
T Consensus 122 ~~----~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~~~~~~ 156 (313)
T 3ehe_A 122 KV----IPTPEDYPT-----------------------------------------HPISLYGASKLACEALIESYCHTF 156 (313)
T ss_dssp SS----SSBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred CC----CCCCCCCCC-----------------------------------------CCCCHHHHHHHHHHHHHHHHHHhc
Confidence 32 122221111 34578999999999999886 35
Q ss_pred CCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcC-CceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCC
Q 008324 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQG-NLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 248 ~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G-~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~ 326 (570)
+++++|+||+.|||+...+ .....++.....+ ....++++++...++|||+|+|++++.++. ....+
T Consensus 157 g~~~~ilRp~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~----~~~~~ 224 (313)
T 3ehe_A 157 DMQAWIYRFANVIGRRSTH--------GVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLR----GDERV 224 (313)
T ss_dssp TCEEEEEECSCEESTTCCC--------SHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTT----CCSSE
T ss_pred CCCEEEEeeccccCcCCCc--------ChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhc----cCCCC
Confidence 8999999999999986532 2233445555555 344577889999999999999999999885 22236
Q ss_pred ceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 327 NIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 327 ~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
++||++++ +++|+.|+++.+.+.++..|
T Consensus 225 ~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 252 (313)
T 3ehe_A 225 NIFNIGSE--DQIKVKRIAEIVCEELGLSP 252 (313)
T ss_dssp EEEECCCS--CCEEHHHHHHHHHHHTTCCC
T ss_pred ceEEECCC--CCeeHHHHHHHHHHHhCCCC
Confidence 89999998 89999999999999998764
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-29 Score=265.87 Aligned_cols=280 Identities=12% Similarity=0.069 Sum_probs=191.2
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccH--------------HHHHHHHHhhhhhHHHHH
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA--------------ALRFQNEVLAKDVFNVLK 72 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~--------------~~rl~~~l~~~~~f~~l~ 72 (570)
--++++++|||||||||||++|+++|++.| .+|+++.|....... .+++. .+.
T Consensus 6 ~~~~~~~~vlVTG~tGfIG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~----------~~~ 72 (404)
T 1i24_A 6 HHHHHGSRVMVIGGDGYCGWATALHLSKKN---YEVCIVDNLVRRLFDHQLGLESLTPIASIHDRIS----------RWK 72 (404)
T ss_dssp ------CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHH----------HHH
T ss_pred ccccCCCeEEEeCCCcHHHHHHHHHHHhCC---CeEEEEEecCccccccccccccccccchhhhhhh----------hHh
Confidence 346789999999999999999999999998 678888875322100 11111 000
Q ss_pred hhhccccccccCCceEEEeccCCCCCCCCCchhhHHHHhCC--ccEEEEcCccCCcc---ccH---HHHHHHhHHHHHHH
Q 008324 73 EKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKFD---ERY---DVAFGINTLGVIHL 144 (570)
Q Consensus 73 ~~~~~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~--vdiViH~AA~v~f~---~~~---~~~~~~Nv~gt~~l 144 (570)
.. ...++.++.+|++ +.+....++++ +|+|||+||..... +.. ...+++|+.||.++
T Consensus 73 ~~--------~~~~v~~~~~Dl~-------d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~l 137 (404)
T 1i24_A 73 AL--------TGKSIELYVGDIC-------DFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNV 137 (404)
T ss_dssp HH--------HCCCCEEEESCTT-------SHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred hc--------cCCceEEEECCCC-------CHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHH
Confidence 00 1257889999999 44445566666 99999999976532 122 34689999999999
Q ss_pred HHHHHHccCc-eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccc
Q 008324 145 VNFAKKCVKL-KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAK 223 (570)
Q Consensus 145 l~la~~~~~l-~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 223 (570)
+++|++. +. ++|||+||++++|...+.++|..+++...... + +...
T Consensus 138 l~a~~~~-~~~~~~V~~SS~~vyg~~~~~~~E~~~~~~~~~~~--------------------~------------~~~~ 184 (404)
T 1i24_A 138 LFAIKEF-GEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRT--------------------D------------TLPY 184 (404)
T ss_dssp HHHHHHH-CTTCEEEEECCGGGGCCCSSCBCSSEEEEEETTEE--------------------E------------EEEC
T ss_pred HHHHHHh-CCCcEEEEeCcHHHhCCCCCCCCcccccccccccc--------------------c------------cccC
Confidence 9999987 55 69999999999986544444432210000000 0 0000
Q ss_pred cCCCCchHHHHHHHHHHHHHHh--ccCCcEEEEecCceecCCCCC---CCccccCc-------cchHHHHHHHhcCCcee
Q 008324 224 LHGWPNTYVFTKTMGEMLMQQS--KENLSLVIIRPTVVSGTYKEP---FPGWVEDL-------KTINTLFVASAQGNLRC 291 (570)
Q Consensus 224 ~~~~~n~Y~~sK~~aE~lv~~~--~~~lp~~IvRPsiV~g~~~ep---~~gw~~~~-------~~~~~~i~~~~~G~~~~ 291 (570)
...+.+.|+.||+.+|.++..+ ..+++++++||+.|||+...+ .++|+... .....++..+..|....
T Consensus 185 ~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 264 (404)
T 1i24_A 185 PKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLT 264 (404)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEE
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchhhHHHHHHHHHHcCCeeE
Confidence 1134578999999999998876 248999999999999997643 12332211 22445666677777666
Q ss_pred eecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhh
Q 008324 292 LVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVY 351 (570)
Q Consensus 292 ~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~ 351 (570)
++++++...++|||+|+|++++.++... ...+..++||+++ .++|+.|+++.+.+.
T Consensus 265 ~~g~g~~~~~~i~v~Dva~a~~~~l~~~-~~~g~~~~yni~~---~~~s~~e~~~~i~~~ 320 (404)
T 1i24_A 265 VYGKGGQTRGYLDIRDTVQCVEIAIANP-AKAGEFRVFNQFT---EQFSVNELASLVTKA 320 (404)
T ss_dssp EETTSCCEEEEEEHHHHHHHHHHHHHSC-CCTTCEEEEEECS---EEEEHHHHHHHHHHH
T ss_pred EeCCCCceECcEEHHHHHHHHHHHHhCc-ccCCCceEEEECC---CCCcHHHHHHHHHHH
Confidence 7889899999999999999999988632 1111126999986 479999999999987
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-29 Score=263.28 Aligned_cols=258 Identities=16% Similarity=0.071 Sum_probs=196.3
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+|||||||||||++|+++|++.| .+|+++.|+....... ...++.++
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~---------------------------~~~~v~~~ 77 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEG---HYVIASDWKKNEHMTE---------------------------DMFCDEFH 77 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCSSSCG---------------------------GGTCSEEE
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCC---CeEEEEECCCccchhh---------------------------ccCCceEE
Confidence 46899999999999999999999988 6889999976542110 02468899
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc----cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceee
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF----DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f----~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~ 166 (570)
.+|++ +.+....+++++|+|||+||.... .+.++..+++|+.|+.+++++|++. ++++|||+||+.++
T Consensus 78 ~~Dl~-------d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~~V~~SS~~v~ 149 (379)
T 2c5a_A 78 LVDLR-------VMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYASSACIY 149 (379)
T ss_dssp ECCTT-------SHHHHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEGGGS
T ss_pred ECCCC-------CHHHHHHHhCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeehhee
Confidence 99999 455556788899999999998653 4567888999999999999999986 78999999999998
Q ss_pred cCCCccccc-ccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008324 167 GERTGLILE-NPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (570)
Q Consensus 167 ~~~~g~i~E-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (570)
+...+...+ .+++|+.+. ...+.+.|+.||..+|.+++.+
T Consensus 150 ~~~~~~~~~~~~~~E~~~~---------------------------------------~~~~~~~Y~~sK~~~E~~~~~~ 190 (379)
T 2c5a_A 150 PEFKQLETTNVSLKESDAW---------------------------------------PAEPQDAFGLEKLATEELCKHY 190 (379)
T ss_dssp CGGGSSSSSSCEECGGGGS---------------------------------------SBCCSSHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCccCCCcCcccCC---------------------------------------CCCCCChhHHHHHHHHHHHHHH
Confidence 753211000 111110000 0134578999999999999876
Q ss_pred --ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCc-eeeecCCCeeeeeeehHHHHHHHHHHHHHhhCC
Q 008324 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNL-RCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQ 322 (570)
Q Consensus 246 --~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~-~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~ 322 (570)
..+++++++||+.|||+...+..++. .....++..+..|.. ..++++++...+++|++|+|++++.++...
T Consensus 191 ~~~~gi~~~ilrp~~v~G~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~--- 264 (379)
T 2c5a_A 191 NKDFGIECRIGRFHNIYGPFGTWKGGRE---KAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD--- 264 (379)
T ss_dssp HHHHCCEEEEEEECCEECTTSCCSSSCC---CHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS---
T ss_pred HHHHCCCEEEEEeCceeCcCCCcccccc---cHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhcc---
Confidence 34899999999999998764432221 123345555555654 456788889999999999999999988622
Q ss_pred CCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 323 PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 323 ~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
.+++||++++ +++|+.|+++.+.+.++..
T Consensus 265 --~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 293 (379)
T 2c5a_A 265 --FREPVNIGSD--EMVSMNEMAEMVLSFEEKK 293 (379)
T ss_dssp --CCSCEEECCC--CCEEHHHHHHHHHHTTTCC
T ss_pred --CCCeEEeCCC--CccCHHHHHHHHHHHhCCC
Confidence 2579999998 8999999999999998864
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-29 Score=258.45 Aligned_cols=256 Identities=22% Similarity=0.293 Sum_probs=193.9
Q ss_pred CEEEEECCcchhHHHHHHHHHHh-CCCc--cEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 13 KTILVSGVTGFVAKVFIEKILRV-QPNV--KKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~-~~~V--~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
|+|||||||||||++|+++|++. ++++ .+|+++.|....... +++. ++ . ...++.+
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~-~~~~-~~-------------~------~~~~~~~ 59 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR-ANLA-PV-------------D------ADPRLRF 59 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG-GGGG-GG-------------T------TCTTEEE
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCch-hhhh-hc-------------c------cCCCeEE
Confidence 57999999999999999999995 4332 578999986532111 0110 00 0 0257889
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceee
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~ 166 (570)
+.+|++ +.+....++.++|+|||+||....+ +.++..+++|+.|+.+++++|++. ++++|||+||.+++
T Consensus 60 ~~~Dl~-------d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-~~~~~v~~SS~~vy 131 (337)
T 1r6d_A 60 VHGDIR-------DAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVSTNQVY 131 (337)
T ss_dssp EECCTT-------CHHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGG
T ss_pred EEcCCC-------CHHHHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecchHHh
Confidence 999999 4555567788999999999986532 355678999999999999999997 78899999999998
Q ss_pred cCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-
Q 008324 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (570)
Q Consensus 167 ~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~- 245 (570)
|...+ .+++|+.+. .+.+.|+.||+.+|.+++.+
T Consensus 132 g~~~~----~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~~~ 166 (337)
T 1r6d_A 132 GSIDS----GSWTESSPL-----------------------------------------EPNSPYAASKAGSDLVARAYH 166 (337)
T ss_dssp CCCSS----SCBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHH
T ss_pred CCCCC----CCCCCCCCC-----------------------------------------CCCCchHHHHHHHHHHHHHHH
Confidence 86421 122221211 33578999999999999876
Q ss_pred -ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCC
Q 008324 246 -KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (570)
Q Consensus 246 -~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 324 (570)
..+++++++||+.|||+...+ . .....++..+..|....++++++...++++++|+|++++.++... .
T Consensus 167 ~~~g~~~~ilrp~~v~G~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~--~-- 235 (337)
T 1r6d_A 167 RTYGLDVRITRCCNNYGPYQHP-----E--KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGG--R-- 235 (337)
T ss_dssp HHHCCCEEEEEECEEECTTCCT-----T--SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC--C--
T ss_pred HHHCCCEEEEEeeeeECCCCCC-----C--ChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCC--C--
Confidence 348999999999999987532 1 122345555666766667788889999999999999999988632 2
Q ss_pred CCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 325 ~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
.+++||++++ .++|+.|+++.+.+.++..
T Consensus 236 ~g~~~~v~~~--~~~s~~e~~~~i~~~~g~~ 264 (337)
T 1r6d_A 236 AGEIYHIGGG--LELTNRELTGILLDSLGAD 264 (337)
T ss_dssp TTCEEEECCC--CEEEHHHHHHHHHHHHTCC
T ss_pred CCCEEEeCCC--CCccHHHHHHHHHHHhCCC
Confidence 2679999998 8999999999999998865
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-29 Score=260.27 Aligned_cols=247 Identities=15% Similarity=0.105 Sum_probs=182.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
-..|+|||||||||||++|+++|++.| ++|+++.|+..... ++. ..++.+
T Consensus 11 ~~~M~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~---~l~------------------------~~~~~~ 60 (342)
T 2x4g_A 11 GAHVKYAVLGATGLLGHHAARAIRAAG---HDLVLIHRPSSQIQ---RLA------------------------YLEPEC 60 (342)
T ss_dssp -CCCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEECTTSCGG---GGG------------------------GGCCEE
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEecChHhhh---hhc------------------------cCCeEE
Confidence 345689999999999999999999988 68899999764321 000 136889
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecC
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~ 168 (570)
+.+|++ +.+....+++++|+|||+||.... .+..+..+++|+.|+.+++++|++. ++++|||+||.++++.
T Consensus 61 ~~~Dl~-------d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~ 132 (342)
T 2x4g_A 61 RVAEML-------DHAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQA-RVPRILYVGSAYAMPR 132 (342)
T ss_dssp EECCTT-------CHHHHHHHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHH-TCSCEEEECCGGGSCC
T ss_pred EEecCC-------CHHHHHHHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHHhhCc
Confidence 999999 455566888899999999997653 2456677899999999999999997 8899999999999886
Q ss_pred CCc--ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhc
Q 008324 169 RTG--LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSK 246 (570)
Q Consensus 169 ~~g--~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~ 246 (570)
..+ ..+|. ++..+. ....+.|+.||+.+|.+++++.
T Consensus 133 ~~~~~~~~E~-----~~~~p~-------------------------------------~~~~~~Y~~sK~~~e~~~~~~~ 170 (342)
T 2x4g_A 133 HPQGLPGHEG-----LFYDSL-------------------------------------PSGKSSYVLCKWALDEQAREQA 170 (342)
T ss_dssp CTTSSCBCTT-----CCCSSC-------------------------------------CTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCC-----CCCCcc-------------------------------------ccccChHHHHHHHHHHHHHHHh
Confidence 542 22222 221100 0015789999999999998862
Q ss_pred -cCCcEEEEecCceecCCC-CCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCC
Q 008324 247 -ENLSLVIIRPTVVSGTYK-EPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (570)
Q Consensus 247 -~~lp~~IvRPsiV~g~~~-ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 324 (570)
.+++++++||+.|||+.. .+ + ...++..+..|....+ ++...++++++|+|++++.++.... .
T Consensus 171 ~~g~~~~ilrp~~v~g~~~~~~--~-------~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~~~~--~- 235 (342)
T 2x4g_A 171 RNGLPVVIGIPGMVLGELDIGP--T-------TGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMALERGR--I- 235 (342)
T ss_dssp HTTCCEEEEEECEEECSCCSSC--S-------TTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHHHHHSC--T-
T ss_pred hcCCcEEEEeCCceECCCCccc--c-------HHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHHHhCCC--C-
Confidence 289999999999999865 21 1 2234555556655444 5678999999999999999886322 1
Q ss_pred CCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 325 ~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
+++||++++ + +|+.|+++.+.+.++..
T Consensus 236 -g~~~~v~~~--~-~s~~e~~~~i~~~~g~~ 262 (342)
T 2x4g_A 236 -GERYLLTGH--N-LEMADLTRRIAELLGQP 262 (342)
T ss_dssp -TCEEEECCE--E-EEHHHHHHHHHHHHTCC
T ss_pred -CceEEEcCC--c-ccHHHHHHHHHHHhCCC
Confidence 679999998 6 99999999999998864
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.1e-29 Score=259.31 Aligned_cols=258 Identities=19% Similarity=0.256 Sum_probs=193.8
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|++.++. .+|+++.|....... +.+. .....++.++.+
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~~~-~~~~---------------------~~~~~~~~~~~~ 61 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPD-VHVTVLDKLTYAGNK-ANLE---------------------AILGDRVELVVG 61 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTT-CEEEEEECCCTTCCG-GGTG---------------------GGCSSSEEEEEC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCC-CEEEEEeCCCCCCCh-hHHh---------------------hhccCCeEEEEC
Confidence 78999999999999999999998322 588999996532111 0100 011257899999
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCC
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~ 169 (570)
|++ +.+....+++++|+|||+||....+ +.++..+++|+.|+.+++++|.+. ++ +|||+||..++|..
T Consensus 62 Dl~-------d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~-~~v~~SS~~vyg~~ 132 (348)
T 1oc2_A 62 DIA-------DAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-DI-RFHHVSTDEVYGDL 132 (348)
T ss_dssp CTT-------CHHHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGGCCB
T ss_pred CCC-------CHHHHHHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHh-CC-eEEEecccceeCCC
Confidence 999 4555668889999999999987542 345678999999999999999997 66 99999999998764
Q ss_pred Ccc--------cccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHH
Q 008324 170 TGL--------ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (570)
Q Consensus 170 ~g~--------i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~l 241 (570)
... .++.+++|+++ ..+.+.|+.||+.+|.+
T Consensus 133 ~~~~~~~~~~~~~~~~~~E~~~-----------------------------------------~~~~~~Y~~sK~~~e~~ 171 (348)
T 1oc2_A 133 PLREDLPGHGEGPGEKFTAETN-----------------------------------------YNPSSPYSSTKAASDLI 171 (348)
T ss_dssp CCGGGSTTTTCSTTSSBCTTSC-----------------------------------------CCCCSHHHHHHHHHHHH
T ss_pred cccccccccccccCCCcCCCCC-----------------------------------------CCCCCccHHHHHHHHHH
Confidence 210 00112222111 13457899999999999
Q ss_pred HHHh--ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHh
Q 008324 242 MQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAH 319 (570)
Q Consensus 242 v~~~--~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~ 319 (570)
++.+ ..+++++++||+.|||+...+ . .....++..+..|....++++++...++++++|+|++++.++...
T Consensus 172 ~~~~~~~~gi~~~ilrp~~v~G~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~ 244 (348)
T 1oc2_A 172 VKAWVRSFGVKATISNCSNNYGPYQHI-E------KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKG 244 (348)
T ss_dssp HHHHHHHHCCEEEEEEECCEESTTCCT-T------SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhCCCEEEEeeceeeCCCCCc-c------chHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHhhCC
Confidence 9876 348999999999999987532 1 112344555566766667788889999999999999999988632
Q ss_pred hCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 320 AKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 320 ~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
. .+++||++++ .++++.|+++.+.+.++..+
T Consensus 245 --~--~g~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 275 (348)
T 1oc2_A 245 --R--MGETYLIGAD--GEKNNKEVLELILEKMGQPK 275 (348)
T ss_dssp --C--TTCEEEECCS--CEEEHHHHHHHHHHHTTCCT
T ss_pred --C--CCCeEEeCCC--CCCCHHHHHHHHHHHhCCCc
Confidence 2 3679999998 89999999999999988653
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-28 Score=254.80 Aligned_cols=265 Identities=19% Similarity=0.207 Sum_probs=190.3
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCc-------ccHHHHHHHHHhhhhhHHHHHhhhccccccccC
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI-------DSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~-------~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
+|+|||||||||||++|+++|++.| .+|+++.|.... ....+++. ... .
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~r~~~~~~~~~~~l~-------------~~~--------~ 57 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAG---YLPVVIDNFHNAFRGGGSLPESLRRVQ-------------ELT--------G 57 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTT---CCEEEEECSSSSCBCSSSSBHHHHHHH-------------HHH--------T
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEecCCcccccccccHHHHHHHH-------------hcc--------C
Confidence 5899999999999999999999998 577888886543 11222221 100 2
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 85 EKITFVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f---~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
.++.++.+|++ +.+..+.+++ ++|+|||+||.... .+..+..+++|+.|+.+++++|++. ++++|||
T Consensus 58 ~~~~~~~~D~~-------~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~ 129 (348)
T 1ek6_A 58 RSVEFEEMDIL-------DQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVF 129 (348)
T ss_dssp CCCEEEECCTT-------CHHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEE
T ss_pred CceEEEECCCC-------CHHHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHh-CCCEEEE
Confidence 57889999999 4444556666 79999999998653 2456778999999999999999986 7899999
Q ss_pred EecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHH
Q 008324 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (570)
Q Consensus 160 vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE 239 (570)
+||..+++...+ .+++|+.+.. +..+.|+.||+.+|
T Consensus 130 ~SS~~~~g~~~~----~~~~E~~~~~----------------------------------------p~~~~Y~~sK~~~e 165 (348)
T 1ek6_A 130 SSSATVYGNPQY----LPLDEAHPTG----------------------------------------GCTNPYGKSKFFIE 165 (348)
T ss_dssp EEEGGGGCSCSS----SSBCTTSCCC----------------------------------------CCSSHHHHHHHHHH
T ss_pred ECcHHHhCCCCC----CCcCCCCCCC----------------------------------------CCCCchHHHHHHHH
Confidence 999999886321 2222212110 12578999999999
Q ss_pred HHHHHhc---cCCcEEEEecCceecCCCCCCCccccC--ccchHHHHHHHh--cCCceeeec------CCCeeeeeeehH
Q 008324 240 MLMQQSK---ENLSLVIIRPTVVSGTYKEPFPGWVED--LKTINTLFVASA--QGNLRCLVG------ETKVIMDVIPVD 306 (570)
Q Consensus 240 ~lv~~~~---~~lp~~IvRPsiV~g~~~ep~~gw~~~--~~~~~~~i~~~~--~G~~~~~~~------~~~~~~d~VpVD 306 (570)
.+++.+. .+++++++||+.|||+......|.... .......+.... .+....+++ +++...++|||+
T Consensus 166 ~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~ 245 (348)
T 1ek6_A 166 EMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVV 245 (348)
T ss_dssp HHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHH
T ss_pred HHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHH
Confidence 9998762 349999999999999854222121111 122233333333 444444555 567899999999
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
|+|++++.++....... .+++||++++ .++|+.|+++.+.+.++..
T Consensus 246 Dva~a~~~~~~~~~~~~-g~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 291 (348)
T 1ek6_A 246 DLAKGHIAALRKLKEQC-GCRIYNLGTG--TGYSVLQMVQAMEKASGKK 291 (348)
T ss_dssp HHHHHHHHHHHHHTTTC-CEEEEEECCS--CCEEHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHhcccccC-CceEEEeCCC--CCccHHHHHHHHHHHhCCC
Confidence 99999999887432122 1379999998 8899999999999998864
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.8e-29 Score=258.87 Aligned_cols=265 Identities=19% Similarity=0.238 Sum_probs=196.0
Q ss_pred CEEEEECCcchhHHHHHHHHHHh-CCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 13 KTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~-~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
|+|||||||||||++|+++|++. | .+|+++.|+...... +. ...++.++.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g---~~V~~~~r~~~~~~~-------~~-------------------~~~~~~~~~ 51 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDH---YEVYGLDIGSDAISR-------FL-------------------NHPHFHFVE 51 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTT---CEEEEEESCCGGGGG-------GT-------------------TCTTEEEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCC---CEEEEEeCCcchHHH-------hh-------------------cCCCeEEEe
Confidence 58999999999999999999997 6 678999997643210 00 025789999
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecC
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f---~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~ 168 (570)
+|++++ .+..+.+++++|+|||+||.... .+.....+++|+.|+.+++++|++. + ++|||+||+.+++.
T Consensus 52 ~D~~~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~v~~SS~~v~g~ 123 (345)
T 2bll_A 52 GDISIH------SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSEVYGM 123 (345)
T ss_dssp CCTTTC------SHHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGGGGBT
T ss_pred ccccCc------HHHHHhhccCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEecHHHcCC
Confidence 999953 23344667789999999997653 3456778899999999999999986 5 89999999999986
Q ss_pred CCc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--
Q 008324 169 RTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (570)
Q Consensus 169 ~~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~-- 245 (570)
..+ .++|...+ ....+ ...+.+.|+.||..+|++++.+
T Consensus 124 ~~~~~~~e~~~~--~~~~~-------------------------------------~~~~~~~Y~~sK~~~e~~~~~~~~ 164 (345)
T 2bll_A 124 CSDKYFDEDHSN--LIVGP-------------------------------------VNKPRWIYSVSKQLLDRVIWAYGE 164 (345)
T ss_dssp CCCSSBCTTTCC--CBCCC-------------------------------------TTCGGGHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcCCcccc--cccCc-------------------------------------ccCcccccHHHHHHHHHHHHHHHH
Confidence 432 23333110 00000 0023468999999999999876
Q ss_pred ccCCcEEEEecCceecCCCCCCCccccC-ccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCC
Q 008324 246 KENLSLVIIRPTVVSGTYKEPFPGWVED-LKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~ep~~gw~~~-~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 324 (570)
..+++++++||+.|||+...+...+..+ ......++..+..|....++++++...++|+|+|+|++++.++...... .
T Consensus 165 ~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~-~ 243 (345)
T 2bll_A 165 KEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNR-C 243 (345)
T ss_dssp HHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGT-T
T ss_pred hcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhcccc-C
Confidence 3489999999999999976443222111 1223455666677776677788889999999999999999988643211 1
Q ss_pred CCceEEecCCCCC-cccHHHHHHHHhhhcccCC
Q 008324 325 DANIYHVGSSLRN-PVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 325 ~~~iyni~s~~~~-pit~~~l~~~i~~~~~~~p 356 (570)
.+++||++++ . ++|+.|+++.+.+.++..+
T Consensus 244 ~g~~~~i~~~--~~~~s~~e~~~~i~~~~g~~~ 274 (345)
T 2bll_A 244 DGEIINIGNP--ENEASIEELGEMLLASFEKHP 274 (345)
T ss_dssp TTEEEEECCT--TSEEEHHHHHHHHHHHHHTCT
T ss_pred CCceEEeCCC--CCCCCHHHHHHHHHHHhCCCc
Confidence 3689999987 5 8999999999999988754
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.2e-30 Score=278.96 Aligned_cols=268 Identities=20% Similarity=0.253 Sum_probs=191.2
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHH-HHhhhccccccccCCceEEE
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNV-LKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~-l~~~~~~~~~~~~~~kv~~v 90 (570)
.|+|||||||||||++|+++|++.+ .+|++++|+.......+|+.+.+-.. |.. +.. ....++.++
T Consensus 150 ~~~VLVTGatG~iG~~l~~~L~~~g---~~V~~l~R~~~~~~~~~~l~~~l~~~--~~~~~~~--------~~~~~v~~v 216 (508)
T 4f6l_B 150 LGNTLLTGATGFLGAYLIEALQGYS---HRIYCFIRADNEEIAWYKLMTNLNDY--FSEETVE--------MMLSNIEVI 216 (508)
T ss_dssp CEEEEESCTTSHHHHHHHHHTBTTE---EEEEEEEESSSHHHHHHHHHHHHHHH--SCHHHHH--------HHSTTEEEE
T ss_pred CCeEEEECCccchHHHHHHHHHhcC---CEEEEEECCCChHHHHHHHHHHHHHh--cccccch--------hccCceEEE
Confidence 4799999999999999999998776 78999999988776667766432111 100 011 114789999
Q ss_pred eccCCC-CCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCC
Q 008324 91 PGDISS-EDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 91 ~gDl~~-~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~ 169 (570)
.||+++ +.++ +..++|+|||+||.+++..++....++|+.||.+++++|++ +.++|||+||.++ |..
T Consensus 217 ~~Dl~d~~~l~---------~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~--~~~~~v~iSS~~v-G~~ 284 (508)
T 4f6l_B 217 VGDFECMDDVV---------LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTY 284 (508)
T ss_dssp EEBTTBCSSCC---------CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT--TTCEEEEEEESCT-TSE
T ss_pred ecCCcccccCC---------CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh--CCCcEEEeCChhh-ccC
Confidence 999997 3333 45789999999999988778888899999999999999998 6789999999999 542
Q ss_pred Cc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-cc
Q 008324 170 TG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-KE 247 (570)
Q Consensus 170 ~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~-~~ 247 (570)
.+ ...+.+++|+++... ..+.+.|+.||+.+|.++.++ ..
T Consensus 285 ~~~~~~~~~~~E~~~~~~--------------------------------------~~~~~~Y~~sK~~~E~~~~~~~~~ 326 (508)
T 4f6l_B 285 FDIDTEDVTFSEADVYKG--------------------------------------QLLTSPYTRSKFYSELKVLEAVNN 326 (508)
T ss_dssp ECTTCSCCEECTTCSCSS--------------------------------------BCCCSHHHHHHHHHHHHHHHHHHT
T ss_pred CccCCcCccccccccccc--------------------------------------ccCCCcHHHHHHHHHHHHHHHHHc
Confidence 11 112233333222110 135689999999999999987 36
Q ss_pred CCcEEEEecCceecCCCCCCCccc-cC--ccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCC
Q 008324 248 NLSLVIIRPTVVSGTYKEPFPGWV-ED--LKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (570)
Q Consensus 248 ~lp~~IvRPsiV~g~~~ep~~gw~-~~--~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 324 (570)
+++++|+||+.|+|+... +|. .+ ......++.....+.... .++++...+++||||+|++++.++....
T Consensus 327 gi~~~ilRp~~v~G~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~g~~~~~~v~v~DvA~ai~~~~~~~~---- 398 (508)
T 4f6l_B 327 GLDGRIVRVGNLTSPYNG---RWHMRNIKTNRFSMVMNDLLQLDCIG-VSMAEMPVDFSFVDTTARQIVALAQVNT---- 398 (508)
T ss_dssp TCEEEEEEECCEESCSSS---CCCCTTCTTCHHHHHHHHHTTCSEEE-TTGGGSEEECEEHHHHHHHHHHHTTBCC----
T ss_pred CCCEEEEecceeccCCCC---CcccCCcchHHHHHHHHHHHHcCCCC-CCccCceEEEEcHHHHHHHHHHHHhCCC----
Confidence 899999999999998763 331 11 122344555555543222 2346789999999999999999885221
Q ss_pred CCceEEecCCCCCcccHHHHHHHHhhhc
Q 008324 325 DANIYHVGSSLRNPVTLVSILDYGFVYF 352 (570)
Q Consensus 325 ~~~iyni~s~~~~pit~~~l~~~i~~~~ 352 (570)
.+++||++++ ++++|.++++.+.+..
T Consensus 399 ~~~~~nl~~~--~~~s~~el~~~i~~~~ 424 (508)
T 4f6l_B 399 PQIIYHVLSP--NKMPVKSLLECVKRKE 424 (508)
T ss_dssp SCSEEEESCS--CEEEHHHHHHHHHSSC
T ss_pred CCCEEEeCCC--CCCCHHHHHHHHHHcC
Confidence 3789999999 8999999999998764
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-28 Score=259.50 Aligned_cols=277 Identities=14% Similarity=0.191 Sum_probs=191.8
Q ss_pred CCEEEEECCcchhHHHHHHHHH-HhCCCccEEEEEEcCCCccc------HHHHHHHHHhhhhhHHHHHhhhccccccccC
Q 008324 12 NKTILVSGVTGFVAKVFIEKIL-RVQPNVKKLYLFVRAADIDS------AALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl-~~~~~V~~V~~lvR~~~~~~------~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
+|+|||||||||||++|+++|+ +.| .+|+++.|...... ..+.+.+. +.+..+. ...
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~---------~~~~~~~----~~~ 65 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTN---HSVVIVDSLVGTHGKSDHVETRENVARK---------LQQSDGP----KPP 65 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCC---CEEEEEECCTTTTTCCTTSCCHHHHHHH---------HHHSCSS----CCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCC---CEEEEEecCCcccccccccchHHHHHHH---------HHHhhcc----ccc
Confidence 6799999999999999999999 888 68899998764320 01222110 0000000 001
Q ss_pred Cc---eEEEeccCCCCCCCCCchhhHHHHhC--C-ccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCce
Q 008324 85 EK---ITFVPGDISSEDLGLKDSNLKEELWN--E-LDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLK 155 (570)
Q Consensus 85 ~k---v~~v~gDl~~~~lgls~~~~~~~l~~--~-vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~ 155 (570)
.+ +.++.+|+++ .+....+++ + +|+|||+||..... +.++..+++|+.|+.+++++|++. +++
T Consensus 66 ~~~~~~~~~~~Dl~d-------~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~ 137 (397)
T 1gy8_A 66 WADRYAALEVGDVRN-------EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCD 137 (397)
T ss_dssp TTTCCCEEEESCTTC-------HHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred cCCceEEEEECCCCC-------HHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHh-CCC
Confidence 24 8899999994 444456665 5 99999999987642 456778999999999999999986 789
Q ss_pred EEEEEecceeecCCCc-cc--ccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 156 VFVHVSTAYVAGERTG-LI--LENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 156 ~~V~vSTa~v~~~~~g-~i--~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+|||+||+++++.... .. +..+++|+++. .+.+.|+
T Consensus 138 ~iv~~SS~~v~g~~~~~~~~~~~~~~~E~~~~-----------------------------------------~p~~~Y~ 176 (397)
T 1gy8_A 138 KIIFSSSAAIFGNPTMGSVSTNAEPIDINAKK-----------------------------------------SPESPYG 176 (397)
T ss_dssp EEEEEEEGGGTBSCCC-----CCCCBCTTSCC-----------------------------------------BCSSHHH
T ss_pred EEEEECCHHHhCCCCcccccccccCcCccCCC-----------------------------------------CCCCchH
Confidence 9999999999875431 00 01112211111 2357899
Q ss_pred HHHHHHHHHHHHh--ccCCcEEEEecCceecCCCCCCCcccc-CccchHHHHH-----HHhcCCc------------eee
Q 008324 233 FTKTMGEMLMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVE-DLKTINTLFV-----ASAQGNL------------RCL 292 (570)
Q Consensus 233 ~sK~~aE~lv~~~--~~~lp~~IvRPsiV~g~~~ep~~gw~~-~~~~~~~~i~-----~~~~G~~------------~~~ 292 (570)
.||+.+|.+++.+ ..+++++++||+.|||+......|... ........+. .+..|.. ..+
T Consensus 177 ~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (397)
T 1gy8_A 177 ESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPI 256 (397)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEE
T ss_pred HHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCccccccccccCCCcee
Confidence 9999999999876 238999999999999987543333221 1122333333 4445532 344
Q ss_pred ec------CCCeeeeeeehHHHHHHHHHHHHHhhCCC--CCC---ceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 293 VG------ETKVIMDVIPVDMVVNAMIVAMVAHAKQP--SDA---NIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 293 ~~------~~~~~~d~VpVDdva~aii~a~~~~~~~~--~~~---~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
++ +++..+++|||||+|++++.++....... +.+ ++||++++ +++|+.|+++.+.+.++..
T Consensus 257 ~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 328 (397)
T 1gy8_A 257 FGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTS--RGYSVREVIEVARKTTGHP 328 (397)
T ss_dssp ECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCS--CCEEHHHHHHHHHHHHCCC
T ss_pred ecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCC--CcccHHHHHHHHHHHhCCC
Confidence 55 67889999999999999999886432211 013 79999998 8999999999999998764
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-29 Score=263.44 Aligned_cols=265 Identities=19% Similarity=0.192 Sum_probs=193.8
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.+++|+|||||||||||++|+++|++.|. .+|+++.|+..... +.+. ...++.
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~~--~~l~-----------------------~~~~v~ 81 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGV--NQVHVVDNLLSAEK--INVP-----------------------DHPAVR 81 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTC--SEEEEECCCTTCCG--GGSC-----------------------CCTTEE
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCC--ceEEEEECCCCCch--hhcc-----------------------CCCceE
Confidence 46789999999999999999999999872 47889998764321 0000 025789
Q ss_pred EEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEeccee
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v 165 (570)
++.+|++ +.+..+.+++++|+|||+||..... +.....+++|+.|+.+++++|++.+++++|||+||.++
T Consensus 82 ~~~~Dl~-------d~~~l~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~v 154 (377)
T 2q1s_A 82 FSETSIT-------DDALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCS 154 (377)
T ss_dssp EECSCTT-------CHHHHHHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--
T ss_pred EEECCCC-------CHHHHHHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHH
Confidence 9999999 4555567788999999999987543 45677899999999999999988546889999999999
Q ss_pred ecCCCc-ccc--cccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHH
Q 008324 166 AGERTG-LIL--ENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (570)
Q Consensus 166 ~~~~~g-~i~--E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv 242 (570)
++...+ .++ |.... .+. ..+.+.|+.||+.+|.++
T Consensus 155 yg~~~~~~~~~~E~~~~--~~~----------------------------------------~~~~~~Y~~sK~~~E~~~ 192 (377)
T 2q1s_A 155 IAEKTFDDAKATEETDI--VSL----------------------------------------HNNDSPYSMSKIFGEFYS 192 (377)
T ss_dssp ------------CCCCC--CCS----------------------------------------SCCCSHHHHHHHHHHHHH
T ss_pred cCCCCCCCcCccccccc--ccc----------------------------------------cCCCCchHHHHHHHHHHH
Confidence 986432 222 22100 010 023478999999999999
Q ss_pred HHh--ccCCcEEEEecCceecCCCCCCCc-cccC-----ccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHH-HH
Q 008324 243 QQS--KENLSLVIIRPTVVSGTYKEPFPG-WVED-----LKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA-MI 313 (570)
Q Consensus 243 ~~~--~~~lp~~IvRPsiV~g~~~ep~~g-w~~~-----~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~a-ii 313 (570)
+.+ ..+++++++||+.|||+...+.+| |... ......++..+..|....++++++...++|+|+|+|++ ++
T Consensus 193 ~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~ 272 (377)
T 2q1s_A 193 VYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIA 272 (377)
T ss_dssp HHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHH
Confidence 876 348999999999999987632222 2221 12244556666777766667888899999999999999 88
Q ss_pred HHHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 314 VAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 314 ~a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
.++... . .+ +||++++ +++|+.|+++.+.+.++..+
T Consensus 273 ~~~~~~--~--~g-~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 308 (377)
T 2q1s_A 273 CAADGT--P--GG-VYNIASG--KETSIADLATKINEITGNNT 308 (377)
T ss_dssp HHHHCC--T--TE-EEECCCC--CCEEHHHHHHHHHHHHTCCS
T ss_pred HHHhcC--C--CC-eEEecCC--CceeHHHHHHHHHHHhCCCC
Confidence 887632 1 35 9999998 89999999999999988654
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-29 Score=258.41 Aligned_cols=276 Identities=17% Similarity=0.203 Sum_probs=190.5
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|++.| .+|+++.|..+.... +.+. + +.. ..++.++.+
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~-~~~~-~---------l~~----------~~~~~~~~~ 57 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQG---IDLIVFDNLSRKGAT-DNLH-W---------LSS----------LGNFEFVHG 57 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSTTHH-HHHH-H---------HHT----------TCCCEEEEC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCC---CEEEEEeCCCccCch-hhhh-h---------hcc----------CCceEEEEc
Confidence 689999999999999999999988 688999885422111 1111 1 110 146889999
Q ss_pred cCCCCCCCCCchhhHHHHhCC--ccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCce-EEEEEecceee
Q 008324 93 DISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLK-VFVHVSTAYVA 166 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~--vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~-~~V~vSTa~v~ 166 (570)
|++ +.+..+.++++ +|+|||+||....+ +.++..+++|+.|+.+++++|++. +++ +|||+||.+++
T Consensus 58 Dl~-------d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~iv~~SS~~v~ 129 (347)
T 1orr_A 58 DIR-------NKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIYSSTNKVY 129 (347)
T ss_dssp CTT-------CHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEEGGGG
T ss_pred CCC-------CHHHHHHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEeccHHHh
Confidence 999 44545577776 99999999986542 456778999999999999999987 565 99999999999
Q ss_pred cCCCc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008324 167 GERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (570)
Q Consensus 167 ~~~~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (570)
+...+ ...|..- .+.+... ....+|+ ....+.+.|+.||+.+|.+++.+
T Consensus 130 g~~~~~~~~e~~~---~~~~~~~-------------~~~~~e~--------------~~~~~~~~Y~~sK~~~E~~~~~~ 179 (347)
T 1orr_A 130 GDLEQYKYNETET---RYTCVDK-------------PNGYDES--------------TQLDFHSPYGCSKGAADQYMLDY 179 (347)
T ss_dssp TTCTTSCEEECSS---CEEETTC-------------TTCBCTT--------------SCCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCcCCcccccc---ccccccc-------------ccCcccc--------------CCCCCCCchHHHHHHHHHHHHHH
Confidence 86432 1111100 0000000 0000000 01134578999999999999886
Q ss_pred --ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCC-----ceeeecCCCeeeeeeehHHHHHHHHHHHHH
Q 008324 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGN-----LRCLVGETKVIMDVIPVDMVVNAMIVAMVA 318 (570)
Q Consensus 246 --~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~-----~~~~~~~~~~~~d~VpVDdva~aii~a~~~ 318 (570)
..+++++++||+.|||+...+.. +. .....++.....|. ....+++++..+++|+++|+|++++.++..
T Consensus 180 ~~~~gi~~~ilrp~~v~g~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~ 255 (347)
T 1orr_A 180 ARIFGLNTVVFRHSSMYGGRQFATY---DQ-GWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALAN 255 (347)
T ss_dssp HHHHCCEEEEEEECCEECTTCCCBT---TB-CHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHT
T ss_pred HHHhCCcEEEEccCceeCcCCCCCC---cC-cHHHHHHHHHHhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhc
Confidence 24899999999999998763311 00 11223344444443 345678889999999999999999998863
Q ss_pred hhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 319 HAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 319 ~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
.... .+++||++++..+++|+.|+++.+.+.++..+
T Consensus 256 ~~~~--~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~ 291 (347)
T 1orr_A 256 VSKI--RGNAFNIGGTIVNSLSLLELFKLLEDYCNIDM 291 (347)
T ss_dssp HHHH--TTCEEEESSCGGGEEEHHHHHHHHHHHHTCCC
T ss_pred cccC--CCCEEEeCCCCCCCccHHHHHHHHHHHhCCCC
Confidence 1111 26799999873235999999999999988653
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-29 Score=269.97 Aligned_cols=270 Identities=19% Similarity=0.234 Sum_probs=189.4
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHH-HHhhhccccccccCCceEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNV-LKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~-l~~~~~~~~~~~~~~kv~~ 89 (570)
.+|+|||||||||||++|+++|++.| .+|++++|+.......+++.+.+-.. |.. +... ...++.+
T Consensus 68 ~~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~l~~~l~~~--~~~~~~~~--------~~~~v~~ 134 (427)
T 4f6c_A 68 PLGNTLLTGATGFLGAYLIEALQGYS---HRIYCFIRADNEEIAWYKLMTNLNDY--FSEETVEM--------MLSNIEV 134 (427)
T ss_dssp CCEEEEEECTTSHHHHHHHHHHTTTE---EEEEEEEECSSHHHHHHHHHHHHHHH--SCHHHHHH--------HHTTEEE
T ss_pred CCCEEEEecCCcHHHHHHHHHHHcCC---CEEEEEECCCChHHHHHHHHHHHHHh--cccccccc--------ccCceEE
Confidence 36799999999999999999998877 78999999988766666766432111 110 1111 1268999
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCC
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~ 169 (570)
+.||+++++ ... ...++|+|||+||.+...+++...+++|+.|+.+++++|++ ++++|||+||.++ |..
T Consensus 135 v~~Dl~d~~-------~l~-~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~--~~~~~v~~SS~~~-G~~ 203 (427)
T 4f6c_A 135 IVGDFECMD-------DVV-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTY 203 (427)
T ss_dssp EEECC---C-------CCC-CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH--TTCEEEEEEEGGG-GSE
T ss_pred EeCCCCCcc-------cCC-CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh--cCCcEEEECchHh-CCC
Confidence 999999632 111 45789999999999887778888899999999999999998 7799999999998 542
Q ss_pred Cc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-cc
Q 008324 170 TG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-KE 247 (570)
Q Consensus 170 ~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~-~~ 247 (570)
.. ...+.++.|+++... ..+.+.|+.||+.+|.+++++ ..
T Consensus 204 ~~~~~~~~~~~E~~~~~~--------------------------------------~~~~~~Y~~sK~~~E~~~~~~~~~ 245 (427)
T 4f6c_A 204 FDIDTEDVTFSEADVYKG--------------------------------------QLLTSPYTRSKFYSELKVLEAVNN 245 (427)
T ss_dssp ECSSCSCCEECTTCSCSS--------------------------------------CCCCSHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCCccccccccccC--------------------------------------CCCCCchHHHHHHHHHHHHHHHHc
Confidence 11 112233333222110 135689999999999999987 36
Q ss_pred CCcEEEEecCceecCCCCCCCccccCc--cchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCC
Q 008324 248 NLSLVIIRPTVVSGTYKEPFPGWVEDL--KTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (570)
Q Consensus 248 ~lp~~IvRPsiV~g~~~ep~~gw~~~~--~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~ 325 (570)
+++++|+||+.|+|+...+. |..+. +....++.....+.... .++++...+++||||+|++++.++.... .
T Consensus 246 g~~~~ivRpg~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~v~DvA~ai~~~~~~~~----~ 318 (427)
T 4f6c_A 246 GLDGRIVRVGNLTSPYNGRW--HMRNIKTNRFSMVMNDLLQLDCIG-VSMAEMPVDFSFVDTTARQIVALAQVNT----P 318 (427)
T ss_dssp TCCEEEEEECCEESCSSSCC--CCTTGGGCHHHHHHHHHHHSSEEE-HHHHTCEECCEEHHHHHHHHHHHTTSCC----C
T ss_pred CCCEEEEeCCeeecCCCCCc--cccCcchHHHHHHHHHHHhcCCCC-CccccceEEEeeHHHHHHHHHHHHcCCC----C
Confidence 89999999999999876421 12221 22334555554443322 2346789999999999999999875221 3
Q ss_pred CceEEecCCCCCcccHHHHHHHHhhh
Q 008324 326 ANIYHVGSSLRNPVTLVSILDYGFVY 351 (570)
Q Consensus 326 ~~iyni~s~~~~pit~~~l~~~i~~~ 351 (570)
+++||++++ ++++|.|+++.+.+.
T Consensus 319 g~~~~l~~~--~~~s~~el~~~i~~~ 342 (427)
T 4f6c_A 319 QIIYHVLSP--NKMPVKSLLECVKRK 342 (427)
T ss_dssp CSEEEESCS--CCEEHHHHHHHHHSS
T ss_pred CCEEEecCC--CCCcHHHHHHHHHHc
Confidence 789999998 899999999999883
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-29 Score=255.76 Aligned_cols=250 Identities=17% Similarity=0.113 Sum_probs=186.6
Q ss_pred CCEEEEECCcchhHHHHHHHHHHh--CCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRV--QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~--~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+|+|||||||||||++|+++|++. + ++|+++.|+..... +. +++.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g---~~V~~~~r~~~~~~----~~-------------------------~~~~~ 49 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGT---ENVIASDIRKLNTD----VV-------------------------NSGPF 49 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCG---GGEEEEESCCCSCH----HH-------------------------HSSCE
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCC---CEEEEEcCCCcccc----cc-------------------------CCCce
Confidence 578999999999999999999998 6 67889999765421 11 24568
Q ss_pred EeccCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCc--cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEeccee
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF--DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f--~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v 165 (570)
+.+|++ +.+..+.+++ ++|+|||+||.... .......+++|+.|+.+++++|++. ++++|||+||..+
T Consensus 50 ~~~D~~-------d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~ 121 (312)
T 2yy7_A 50 EVVNAL-------DFNQIEHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAK-KIKKIFWPSSIAV 121 (312)
T ss_dssp EECCTT-------CHHHHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTT-SCSEEECCEEGGG
T ss_pred EEecCC-------CHHHHHHHHhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHH
Confidence 899999 4444556666 89999999997643 2456778999999999999999986 7899999999999
Q ss_pred ecCCCc--ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHH
Q 008324 166 AGERTG--LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (570)
Q Consensus 166 ~~~~~g--~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~ 243 (570)
++...+ .++|. .+. .+.+.|+.||..+|.++.
T Consensus 122 ~~~~~~~~~~~e~-----~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~ 155 (312)
T 2yy7_A 122 FGPTTPKENTPQY-----TIM-----------------------------------------EPSTVYGISKQAGERWCE 155 (312)
T ss_dssp CCTTSCSSSBCSS-----CBC-----------------------------------------CCCSHHHHHHHHHHHHHH
T ss_pred hCCCCCCCCcccc-----CcC-----------------------------------------CCCchhHHHHHHHHHHHH
Confidence 986431 22222 111 345789999999999998
Q ss_pred Hh--ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhC
Q 008324 244 QS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAK 321 (570)
Q Consensus 244 ~~--~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~ 321 (570)
.+ ..+++++++||+.|||+...|-.+.. ......+.....+.....+++++...+++||+|+|++++.++.....
T Consensus 156 ~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~ 232 (312)
T 2yy7_A 156 YYHNIYGVDVRSIRYPGLISWSTPPGGGTT---DYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVE 232 (312)
T ss_dssp HHHHHHCCEEECEEECEEECSSSCCCSCTT---THHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGG
T ss_pred HHHHhcCCcEEEEeCCeEecCCCCCCCchh---hhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCccc
Confidence 76 34899999999999998764432211 12233333333333345567888899999999999999998863321
Q ss_pred CCCCCceEEecCCCCCcccHHHHHHHHhhhcc
Q 008324 322 QPSDANIYHVGSSLRNPVTLVSILDYGFVYFT 353 (570)
Q Consensus 322 ~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~ 353 (570)
....+++||+++ .++|+.|+++.+.+.++
T Consensus 233 ~~~~~~~~ni~~---~~~s~~e~~~~i~~~~~ 261 (312)
T 2yy7_A 233 KIKIHSSYNLAA---MSFTPTEIANEIKKHIP 261 (312)
T ss_dssp GCCCSSCEECCS---EEECHHHHHHHHHTTCT
T ss_pred ccccCceEEeCC---CccCHHHHHHHHHHHCC
Confidence 111147999985 58999999999998876
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-28 Score=253.81 Aligned_cols=256 Identities=18% Similarity=0.140 Sum_probs=191.9
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+++|||||||||||++|+++|++.| .+|++++|+...... +++. .+ . ...++.++
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~-~~~~-~~---------~----------~~~~~~~~ 68 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKG---YRVHGLVARRSSDTR-WRLR-EL---------G----------IEGDIQYE 68 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSSCCC-HHHH-HT---------T----------CGGGEEEE
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCC---CeEEEEeCCCccccc-cchh-hc---------c----------ccCceEEE
Confidence 36899999999999999999999988 688999997654221 1111 00 0 02568899
Q ss_pred eccCCCCCCCCCchhhHHHHhCC--ccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHHccCc-eEEEEEecce
Q 008324 91 PGDISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKL-KVFVHVSTAY 164 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~--vdiViH~AA~v~f---~~~~~~~~~~Nv~gt~~ll~la~~~~~l-~~~V~vSTa~ 164 (570)
.+|++ +.+....++++ +|+|||+||.... .+.+...+++|+.|+.+++++|++. ++ ++|||+||.+
T Consensus 69 ~~Dl~-------d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~SS~~ 140 (335)
T 1rpn_A 69 DGDMA-------DACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQF-SPETRFYQASTSE 140 (335)
T ss_dssp ECCTT-------CHHHHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTSEEEEEEEGG
T ss_pred ECCCC-------CHHHHHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEeCHH
Confidence 99999 44444566664 7999999998654 2456778999999999999999987 65 8999999999
Q ss_pred eecCCCc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHH
Q 008324 165 VAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (570)
Q Consensus 165 v~~~~~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~ 243 (570)
+++...+ .++|. .+. .+.+.|+.||+.+|.+++
T Consensus 141 v~g~~~~~~~~E~-----~~~-----------------------------------------~p~~~Y~~sK~~~e~~~~ 174 (335)
T 1rpn_A 141 MFGLIQAERQDEN-----TPF-----------------------------------------YPRSPYGVAKLYGHWITV 174 (335)
T ss_dssp GGCSCSSSSBCTT-----SCC-----------------------------------------CCCSHHHHHHHHHHHHHH
T ss_pred HhCCCCCCCCCcc-----cCC-----------------------------------------CCCChhHHHHHHHHHHHH
Confidence 9986542 22332 211 335789999999999998
Q ss_pred Hh--ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCc-eeeecCCCeeeeeeehHHHHHHHHHHHHHhh
Q 008324 244 QS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNL-RCLVGETKVIMDVIPVDMVVNAMIVAMVAHA 320 (570)
Q Consensus 244 ~~--~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~-~~~~~~~~~~~d~VpVDdva~aii~a~~~~~ 320 (570)
.+ ..+++++++||+.+||+...+ ++.. .....++..+..|.. ...+++++...++|||+|+|++++.++...
T Consensus 175 ~~~~~~~~~~~i~r~~~v~Gp~~~~--~~~~--~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~- 249 (335)
T 1rpn_A 175 NYRESFGLHASSGILFNHESPLRGI--EFVT--RKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD- 249 (335)
T ss_dssp HHHHHHCCCEEEEEECCEECTTSCT--TSHH--HHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSS-
T ss_pred HHHHHcCCcEEEEeeCcccCCCCCC--Ccch--HHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcC-
Confidence 76 348999999999999986521 1111 113344555666753 345688899999999999999999988632
Q ss_pred CCCCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 321 KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 321 ~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
. .++||++++ .++|+.|+++.+.+.++..
T Consensus 250 -~---~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 278 (335)
T 1rpn_A 250 -K---ADDYVVATG--VTTTVRDMCQIAFEHVGLD 278 (335)
T ss_dssp -S---CCCEEECCS--CEEEHHHHHHHHHHTTTCC
T ss_pred -C---CCEEEEeCC--CCccHHHHHHHHHHHhCCC
Confidence 1 368999998 8999999999999998764
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-29 Score=251.64 Aligned_cols=234 Identities=12% Similarity=0.049 Sum_probs=178.5
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+||||| +||||++|+++|++.| .+|+++.|+.... ..++.++
T Consensus 2 ~~~~ilVtG-aG~iG~~l~~~L~~~g---~~V~~~~r~~~~~-------------------------------~~~~~~~ 46 (286)
T 3gpi_A 2 SLSKILIAG-CGDLGLELARRLTAQG---HEVTGLRRSAQPM-------------------------------PAGVQTL 46 (286)
T ss_dssp CCCCEEEEC-CSHHHHHHHHHHHHTT---CCEEEEECTTSCC-------------------------------CTTCCEE
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHHCC---CEEEEEeCCcccc-------------------------------ccCCceE
Confidence 468999999 5999999999999998 5788999976431 2577899
Q ss_pred eccCCCCCCCCCchhhHHHHhCC-ccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCC
Q 008324 91 PGDISSEDLGLKDSNLKEELWNE-LDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~-vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~ 169 (570)
.+|++++ +....++++ +|+|||+||... ...+..+++|+.|+.+++++|++. ++++|||+||+.+||..
T Consensus 47 ~~Dl~d~-------~~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~ll~a~~~~-~~~~~v~~SS~~vyg~~ 116 (286)
T 3gpi_A 47 IADVTRP-------DTLASIVHLRPEILVYCVAASE--YSDEHYRLSYVEGLRNTLSALEGA-PLQHVFFVSSTGVYGQE 116 (286)
T ss_dssp ECCTTCG-------GGCTTGGGGCCSEEEECHHHHH--HC-----CCSHHHHHHHHHHTTTS-CCCEEEEEEEGGGCCCC
T ss_pred EccCCCh-------HHHHHhhcCCCCEEEEeCCCCC--CCHHHHHHHHHHHHHHHHHHHhhC-CCCEEEEEcccEEEcCC
Confidence 9999953 333355565 999999999743 445667899999999999999985 88999999999999875
Q ss_pred Cc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccC
Q 008324 170 TG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKEN 248 (570)
Q Consensus 170 ~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~ 248 (570)
.+ .++|. .+. .+.+.|+.||..+|.+ .++
T Consensus 117 ~~~~~~E~-----~~~-----------------------------------------~p~~~Y~~sK~~~E~~-~~~--- 146 (286)
T 3gpi_A 117 VEEWLDED-----TPP-----------------------------------------IAKDFSGKRMLEAEAL-LAA--- 146 (286)
T ss_dssp CSSEECTT-----SCC-----------------------------------------CCCSHHHHHHHHHHHH-GGG---
T ss_pred CCCCCCCC-----CCC-----------------------------------------CCCChhhHHHHHHHHH-Hhc---
Confidence 43 22332 221 3457899999999999 664
Q ss_pred CcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCce
Q 008324 249 LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANI 328 (570)
Q Consensus 249 lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~i 328 (570)
++++|+||+.|||+... .++..+.. ....++++...++|+++|+|++++.++.... ....+++
T Consensus 147 ~~~~ilR~~~v~G~~~~-------------~~~~~~~~---~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~~~ 209 (286)
T 3gpi_A 147 YSSTILRFSGIYGPGRL-------------RMIRQAQT---PEQWPARNAWTNRIHRDDGAAFIAYLIQQRS-HAVPERL 209 (286)
T ss_dssp SSEEEEEECEEEBTTBC-------------HHHHHTTC---GGGSCSSBCEECEEEHHHHHHHHHHHHHHHT-TSCCCSE
T ss_pred CCeEEEecccccCCCch-------------hHHHHHHh---cccCCCcCceeEEEEHHHHHHHHHHHHhhhc-cCCCCce
Confidence 99999999999998652 12333333 2234778889999999999999999987532 1123689
Q ss_pred EEecCCCCCcccHHHHHHHHhhhcccCCCC
Q 008324 329 YHVGSSLRNPVTLVSILDYGFVYFTKKPWI 358 (570)
Q Consensus 329 yni~s~~~~pit~~~l~~~i~~~~~~~p~~ 358 (570)
||++++ +++|+.|+++.+.+.++..+..
T Consensus 210 ~~~~~~--~~~s~~e~~~~i~~~~g~~~~~ 237 (286)
T 3gpi_A 210 YIVTDN--QPLPVHDLLRWLADRQGIAYPA 237 (286)
T ss_dssp EEECCS--CCEEHHHHHHHHHHHTTCCCCC
T ss_pred EEEeCC--CCCCHHHHHHHHHHHcCCCCCC
Confidence 999998 8999999999999999876433
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-28 Score=253.96 Aligned_cols=258 Identities=19% Similarity=0.253 Sum_probs=190.8
Q ss_pred CEEEEECCcchhHHHHHHHHHHh-CCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 13 KTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~-~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
|+|||||||||||++|+++|++. + .+|+++.|....... +.+. ++ . ...++.++.
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g---~~V~~~~r~~~~~~~-~~~~-~~---------~----------~~~~~~~~~ 56 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQ---DTVVNIDKLTYAGNL-ESLS-DI---------S----------ESNRYNFEH 56 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCS---CEEEEEECCCTTCCG-GGGT-TT---------T----------TCTTEEEEE
T ss_pred CEEEEECCCchHhHHHHHHHHhcCC---CeEEEEecCCCCCch-hhhh-hh---------h----------cCCCeEEEE
Confidence 47999999999999999999997 5 578999986521110 0110 00 0 025788999
Q ss_pred ccCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHc-cCce-------EEE
Q 008324 92 GDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKC-VKLK-------VFV 158 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~-~~l~-------~~V 158 (570)
+|++ +.+....+++ ++|+|||+||....+ +.++..+++|+.|+.+++++|.+. .+++ +||
T Consensus 57 ~Dl~-------d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv 129 (361)
T 1kew_A 57 ADIC-------DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFH 129 (361)
T ss_dssp CCTT-------CHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEE
T ss_pred CCCC-------CHHHHHHHHhhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEE
Confidence 9999 4555556776 899999999986532 456778999999999999999874 3566 999
Q ss_pred EEecceeecCCCc--cccc-c---cCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 159 HVSTAYVAGERTG--LILE-N---PLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 159 ~vSTa~v~~~~~g--~i~E-~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
|+||.+++|.... ...+ . +++|+.+ ..+.+.|+
T Consensus 130 ~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~-----------------------------------------~~~~~~Y~ 168 (361)
T 1kew_A 130 HISTDEVYGDLPHPDEVENSVTLPLFTETTA-----------------------------------------YAPSSPYS 168 (361)
T ss_dssp EEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC-----------------------------------------CCCCSHHH
T ss_pred EeCCHHHhCCCcccccccccccCCCCCCCCC-----------------------------------------CCCCCccH
Confidence 9999999886421 0000 0 1111111 13457899
Q ss_pred HHHHHHHHHHHHh--ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHH
Q 008324 233 FTKTMGEMLMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (570)
Q Consensus 233 ~sK~~aE~lv~~~--~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ 310 (570)
.||+.+|.+++.+ ..+++++++||+.|||+...+ . .....++..+..|....++++++...++++++|+|+
T Consensus 169 ~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 241 (361)
T 1kew_A 169 ASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP-----E--KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHAR 241 (361)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT-----T--SHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCc-----c--cHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHHHH
Confidence 9999999999876 248999999999999987532 0 122344555566665567788889999999999999
Q ss_pred HHHHHHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 311 AMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
+++.++... . .+++||++++ .++++.|+++.+.+.++..
T Consensus 242 a~~~~~~~~--~--~g~~~~v~~~--~~~s~~e~~~~i~~~~g~~ 280 (361)
T 1kew_A 242 ALHMVVTEG--K--AGETYNIGGH--NEKKNLDVVFTICDLLDEI 280 (361)
T ss_dssp HHHHHHHHC--C--TTCEEEECCC--CEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCC--C--CCCEEEecCC--CeeeHHHHHHHHHHHhCCc
Confidence 999988632 1 3679999998 8899999999999988864
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-28 Score=254.12 Aligned_cols=251 Identities=14% Similarity=0.166 Sum_probs=188.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|||||||||||++|+++|++.|. .+|+++.|+...... +. ..++.
T Consensus 44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~~~-~~--------------------------~~~~~- 93 (357)
T 2x6t_A 44 IEGRMIIVTGGAGFIGSNIVKALNDKGI--TDILVVDNLKDGTKF-VN--------------------------LVDLN- 93 (357)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTC--CCEEEEECCSSGGGG-GG--------------------------TTTSC-
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC--cEEEEEecCCCcchh-hc--------------------------ccCce-
Confidence 5679999999999999999999999872 457888887644210 00 11222
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-----CccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecc
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-----ELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-----~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa 163 (570)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.+++++|++. ++ +|||+||.
T Consensus 94 ~~~d~~-------~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-~~-r~V~~SS~ 164 (357)
T 2x6t_A 94 IADYMD-------KEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSA 164 (357)
T ss_dssp CSEEEE-------HHHHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEG
T ss_pred EeeecC-------cHHHHHHHHhhcccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEcch
Confidence 678888 5555566666 59999999998654 3567788999999999999999986 67 99999999
Q ss_pred eeecCCCc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHH
Q 008324 164 YVAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (570)
Q Consensus 164 ~v~~~~~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv 242 (570)
.+++...+ .++|.. + ..+.+.|+.||..+|.++
T Consensus 165 ~v~g~~~~~~~~E~~-----~-----------------------------------------~~p~~~Y~~sK~~~E~~~ 198 (357)
T 2x6t_A 165 ATYGGRTSDFIESRE-----Y-----------------------------------------EKPLNVFGYSKFLFDEYV 198 (357)
T ss_dssp GGGCSCSSCCCSSGG-----G-----------------------------------------CCCSSHHHHHHHHHHHHH
T ss_pred HHhCCCCCCCcCCcC-----C-----------------------------------------CCCCChhHHHHHHHHHHH
Confidence 99876432 222221 1 134578999999999999
Q ss_pred HHhc--cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCe-eeeeeehHHHHHHHHHHHHHh
Q 008324 243 QQSK--ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKV-IMDVIPVDMVVNAMIVAMVAH 319 (570)
Q Consensus 243 ~~~~--~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~-~~d~VpVDdva~aii~a~~~~ 319 (570)
+.+. .+++++++||+.|||+...+.. ... .....++..+..|....++++++. ..++++++|+|++++.++...
T Consensus 199 ~~~~~~~g~~~~ilRp~~v~Gp~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~ 275 (357)
T 2x6t_A 199 RQILPEANSQIVGFRYFNVYGPREGHKG-SMA--SVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG 275 (357)
T ss_dssp HHHGGGCSSCEEEEEECEEESSSCTTCG-GGS--CHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCCEEEEecCeEECCCCCCCc-ccc--hHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcC
Confidence 8873 4799999999999998764311 111 223345556666766667788888 999999999999999988632
Q ss_pred hCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 320 AKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 320 ~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
. +++||++++ .++++.|+++.+.+.++..
T Consensus 276 ~-----~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 304 (357)
T 2x6t_A 276 V-----SGIFNLGTG--RAESFQAVADATLAYHKKG 304 (357)
T ss_dssp C-----CEEEEESCS--CCEEHHHHHHHHHHHHTCC
T ss_pred C-----CCeEEecCC--CcccHHHHHHHHHHHcCCC
Confidence 1 579999998 8999999999999998865
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.5e-28 Score=249.29 Aligned_cols=255 Identities=16% Similarity=0.167 Sum_probs=190.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|||||||||||++|+++|++.| .+|+++.|...+... .+. ++ ....++.+
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~--~~~-~~-------------------~~~~~~~~ 79 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMDG---HEVTVVDNFFTGRKR--NVE-HW-------------------IGHENFEL 79 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCGG--GTG-GG-------------------TTCTTEEE
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHCC---CEEEEEeCCCccchh--hhh-hh-------------------ccCCceEE
Confidence 568999999999999999999999988 678999997543210 000 00 00257889
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceee
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f---~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~ 166 (570)
+.+|+.++. +.++|+|||+||.... .+.....+++|+.|+.+++++|++. +. +|||+||+.++
T Consensus 80 ~~~D~~~~~------------~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~ 145 (343)
T 2b69_A 80 INHDVVEPL------------YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLASTSEVY 145 (343)
T ss_dssp EECCTTSCC------------CCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEEGGGG
T ss_pred EeCccCChh------------hcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC-cEEEECcHHHh
Confidence 999998532 3579999999997653 3456778999999999999999987 55 89999999999
Q ss_pred cCCC-cccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008324 167 GERT-GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (570)
Q Consensus 167 ~~~~-g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (570)
+... ..++|..+.+..+. .+.+.|+.||+.+|.++..+
T Consensus 146 g~~~~~~~~E~~~~~~~~~-----------------------------------------~~~~~Y~~sK~~~E~~~~~~ 184 (343)
T 2b69_A 146 GDPEVHPQSEDYWGHVNPI-----------------------------------------GPRACYDEGKRVAETMCYAY 184 (343)
T ss_dssp BSCSSSSBCTTCCCBCCSS-----------------------------------------STTHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCcccccccCCCC-----------------------------------------CCCCchHHHHHHHHHHHHHH
Confidence 8643 23344322110110 23468999999999999876
Q ss_pred --ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCC
Q 008324 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQP 323 (570)
Q Consensus 246 --~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~ 323 (570)
..+++++++||+.|||+...+..+ .....++..+..|....++++++...++++|+|+|++++.++.. .
T Consensus 185 ~~~~~~~~~ilrp~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~--~-- 255 (343)
T 2b69_A 185 MKQEGVEVRVARIFNTFGPRMHMNDG-----RVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS--N-- 255 (343)
T ss_dssp HHHHCCCEEEEEECCEECTTCCTTCC-----CHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTS--S--
T ss_pred HHHhCCcEEEEEEcceeCcCCCCCcc-----cHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhc--C--
Confidence 358999999999999987543211 22334555566676666788888999999999999999988742 1
Q ss_pred CCCceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 324 SDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 324 ~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
.+++||++++ .++|+.|+++.+.+.++..+
T Consensus 256 -~~~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 285 (343)
T 2b69_A 256 -VSSPVNLGNP--EEHTILEFAQLIKNLVGSGS 285 (343)
T ss_dssp -CCSCEEESCC--CEEEHHHHHHHHHHHHTCCC
T ss_pred -CCCeEEecCC--CCCcHHHHHHHHHHHhCCCC
Confidence 1568999998 89999999999999988653
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-28 Score=247.95 Aligned_cols=247 Identities=21% Similarity=0.233 Sum_probs=186.5
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|++.| .+|+++.|....... . ...++.++.+
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r~~~~~~~--~-------------------------~~~~~~~~~~ 50 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARG---LEVAVLDNLATGKRE--N-------------------------VPKGVPFFRV 50 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT---CEEEEECCCSSCCGG--G-------------------------SCTTCCEECC
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCC---CEEEEEECCCcCchh--h-------------------------cccCeEEEEC
Confidence 579999999999999999999988 678888885432110 0 0145678899
Q ss_pred cCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecc-eee
Q 008324 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA-YVA 166 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa-~v~ 166 (570)
|++ +.+..+.+++ ++|+|||+||..... +.+...+++|+.|+.+++++|++. ++++||++||. .++
T Consensus 51 Dl~-------~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~~~ 122 (311)
T 2p5y_A 51 DLR-------DKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQY-GVEKLVFASTGGAIY 122 (311)
T ss_dssp CTT-------CHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEHHHHH
T ss_pred CCC-------CHHHHHHHHHhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCChhhc
Confidence 999 4444456666 799999999976532 456678999999999999999986 78999999998 888
Q ss_pred cC-CCc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHH
Q 008324 167 GE-RTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (570)
Q Consensus 167 ~~-~~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~ 244 (570)
+. ..+ .++|. .+. .+.+.|+.||+.+|.+++.
T Consensus 123 g~~~~~~~~~E~-----~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~ 156 (311)
T 2p5y_A 123 GEVPEGERAEET-----WPP-----------------------------------------RPKSPYAASKAAFEHYLSV 156 (311)
T ss_dssp CCCCTTCCBCTT-----SCC-----------------------------------------CCCSHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCcCCC-----CCC-----------------------------------------CCCChHHHHHHHHHHHHHH
Confidence 75 211 22222 111 2357899999999999987
Q ss_pred h--ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeee-----cCCCeeeeeeehHHHHHHHHHHHH
Q 008324 245 S--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLV-----GETKVIMDVIPVDMVVNAMIVAMV 317 (570)
Q Consensus 245 ~--~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~-----~~~~~~~d~VpVDdva~aii~a~~ 317 (570)
+ ..+++++++||+.|||+...+.. .-.....++..+..|....++ ++++...++++++|+|++++.++.
T Consensus 157 ~~~~~~~~~~~lrp~~v~Gp~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~ 232 (311)
T 2p5y_A 157 YGQSYGLKWVSLRYGNVYGPRQDPHG----EAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALF 232 (311)
T ss_dssp HHHHHCCCEEEEEECEEECTTCCSSS----TTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEeeccccCcCCCCCC----cCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHh
Confidence 6 34899999999999998753211 001123344445556655566 788889999999999999999886
Q ss_pred HhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 318 AHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 318 ~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
.. +++||++++ .++|+.|+++.+.+.++..
T Consensus 233 ~~------~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 262 (311)
T 2p5y_A 233 SL------EGIYNVGTG--EGHTTREVLMAVAEAAGKA 262 (311)
T ss_dssp HC------CEEEEESCS--CCEEHHHHHHHHHHHHTCC
T ss_pred CC------CCEEEeCCC--CCccHHHHHHHHHHHhCCC
Confidence 31 579999998 8999999999999998864
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.96 E-value=4e-29 Score=255.94 Aligned_cols=244 Identities=15% Similarity=0.103 Sum_probs=180.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccH-HHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA-ALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~-~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
..+|+|||||||||||++|+++|++.| .+|+++.|+...... .+.+. . .....++.
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~------------------~--~~~~~~~~ 61 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVASG---EEVTVLDDLRVPPMIPPEGTG------------------K--FLEKPVLE 61 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTT---CCEEEECCCSSCCSSCCTTSS------------------E--EECSCGGG
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHCC---CEEEEEecCCcccccchhhhh------------------h--hccCCCee
Confidence 357899999999999999999999998 578999997652100 00000 0 00012233
Q ss_pred EEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEeccee
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f---~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v 165 (570)
++.+|++ ++|+|||+||.... .+.....++ |+.|+.+++++|++. ++++|||+||.++
T Consensus 62 ~~~~Dl~-----------------~~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~-~v~~~v~~SS~~v 122 (321)
T 3vps_A 62 LEERDLS-----------------DVRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSV-GVPKVVVGSTCEV 122 (321)
T ss_dssp CCHHHHT-----------------TEEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHH-TCCEEEEEEEGGG
T ss_pred EEeCccc-----------------cCCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHc-CCCeEEEecCHHH
Confidence 3334433 79999999998753 123334566 999999999999997 7999999999999
Q ss_pred ecCCCc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHH
Q 008324 166 AGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (570)
Q Consensus 166 ~~~~~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~ 244 (570)
++...+ .++|. .+. .+.+.|+.||..+|.++..
T Consensus 123 ~~~~~~~~~~E~-----~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~ 156 (321)
T 3vps_A 123 YGQADTLPTPED-----SPL-----------------------------------------SPRSPYAASKVGLEMVAGA 156 (321)
T ss_dssp GCSCSSSSBCTT-----SCC-----------------------------------------CCCSHHHHHHHHHHHHHHH
T ss_pred hCCCCCCCCCCC-----CCC-----------------------------------------CCCChhHHHHHHHHHHHHH
Confidence 987532 22222 221 3458899999999999998
Q ss_pred h--ccCC-cEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhC
Q 008324 245 S--KENL-SLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAK 321 (570)
Q Consensus 245 ~--~~~l-p~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~ 321 (570)
+ ..++ +++|+||+.|||+...+ ......++..+..|....++++++...++|+++|+|++++.++...
T Consensus 157 ~~~~~~~~~~~ilRp~~v~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~-- 227 (321)
T 3vps_A 157 HQRASVAPEVGIVRFFNVYGPGERP-------DALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRP-- 227 (321)
T ss_dssp HHHSSSSCEEEEEEECEEECTTCCT-------TSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSC--
T ss_pred HHHHcCCCceEEEEeccccCcCCCC-------CChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcC--
Confidence 7 3578 99999999999987643 1223455566667777778899999999999999999999887521
Q ss_pred CCCCCceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 322 QPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 322 ~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
..+ +||++++ +++|+.|+++.+. .++..+
T Consensus 228 --~~g-~~~i~~~--~~~s~~e~~~~i~-~~g~~~ 256 (321)
T 3vps_A 228 --LPS-VVNFGSG--QSLSVNDVIRILQ-ATSPAA 256 (321)
T ss_dssp --CCS-EEEESCS--CCEEHHHHHHHHH-TTCTTC
T ss_pred --CCC-eEEecCC--CcccHHHHHHHHH-HhCCCC
Confidence 125 9999998 8999999999999 887653
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-28 Score=252.92 Aligned_cols=280 Identities=16% Similarity=0.122 Sum_probs=193.2
Q ss_pred cHHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccC
Q 008324 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 5 ~i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
++..+++||+|||||||||||++|+++|++.| .+|++++|+.... +.+.+ .+.... .
T Consensus 4 ~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~---~~~~~---------~~~~~~--------~ 60 (342)
T 1y1p_A 4 DNAVLPEGSLVLVTGANGFVASHVVEQLLEHG---YKVRGTARSASKL---ANLQK---------RWDAKY--------P 60 (342)
T ss_dssp TTCSSCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSHHHH---HHHHH---------HHHHHS--------T
T ss_pred CcccCCCCCEEEEECCccHHHHHHHHHHHHCC---CEEEEEeCCcccH---HHHHH---------HhhccC--------C
Confidence 45667899999999999999999999999998 6889999964321 12211 111111 1
Q ss_pred CceEEE-eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecc
Q 008324 85 EKITFV-PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (570)
Q Consensus 85 ~kv~~v-~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa 163 (570)
.++.++ .+|++++ +..+.+++++|+|||+||.....+.+...+++|+.|+.+++++|.+..++++|||+||.
T Consensus 61 ~~~~~~~~~D~~d~-------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~ 133 (342)
T 1y1p_A 61 GRFETAVVEDMLKQ-------GAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSST 133 (342)
T ss_dssp TTEEEEECSCTTST-------TTTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCG
T ss_pred CceEEEEecCCcCh-------HHHHHHHcCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccH
Confidence 468888 8999953 33345667899999999988776677888999999999999999854478999999999
Q ss_pred eeecCCC-----cccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHH
Q 008324 164 YVAGERT-----GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (570)
Q Consensus 164 ~v~~~~~-----g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~a 238 (570)
++++... ..++|. ++.+....... .+ .+.....+.+.|+.||..+
T Consensus 134 ~~~~~~~~~~~~~~~~E~-----~~~~~~~~~~~--------~~-----------------~~~~~~~~~~~Y~~sK~~~ 183 (342)
T 1y1p_A 134 VSALIPKPNVEGIYLDEK-----SWNLESIDKAK--------TL-----------------PESDPQKSLWVYAASKTEA 183 (342)
T ss_dssp GGTCCCCTTCCCCEECTT-----CCCHHHHHHHH--------HS-----------------CTTSTTHHHHHHHHHHHHH
T ss_pred HHhcCCCCCCCCcccCcc-----ccCchhhhhhc--------cc-----------------cccccccchHHHHHHHHHH
Confidence 8875421 123333 22111100000 00 0000001236899999999
Q ss_pred HHHHHHhc----cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHH
Q 008324 239 EMLMQQSK----ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (570)
Q Consensus 239 E~lv~~~~----~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~ 314 (570)
|.+++.+. .+++++++||+.|||+...+... . .....++..+..|....+.++. ...++++++|+|++++.
T Consensus 184 e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~Dva~a~~~ 258 (342)
T 1y1p_A 184 ELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQ---S-GSTSGWMMSLFNGEVSPALALM-PPQYYVSAVDIGLLHLG 258 (342)
T ss_dssp HHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTC---C-CHHHHHHHHHHTTCCCHHHHTC-CSEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCC---C-ccHHHHHHHHHcCCCccccccC-CcCCEeEHHHHHHHHHH
Confidence 99998762 37899999999999987654211 0 2334555666666654445554 57899999999999999
Q ss_pred HHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 315 AMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 315 a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
++... .. .+..| ++++ .++|+.|+++.+.+.++..
T Consensus 259 ~~~~~-~~--~g~~~-~~~g--~~~s~~e~~~~i~~~~~~~ 293 (342)
T 1y1p_A 259 CLVLP-QI--ERRRV-YGTA--GTFDWNTVLATFRKLYPSK 293 (342)
T ss_dssp HHHCT-TC--CSCEE-EECC--EEECHHHHHHHHHHHCTTS
T ss_pred HHcCc-cc--CCceE-EEeC--CCCCHHHHHHHHHHHCCCc
Confidence 88632 11 13444 3455 6799999999999998864
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-27 Score=245.38 Aligned_cols=264 Identities=18% Similarity=0.227 Sum_probs=184.1
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCc-ccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI-DSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~-~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
|+|||||||||||++|+++|++.| .+|+++.|.... ....+++. +.. ..++.++.
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~~~~~~~~~~~~~~~-------------~~~--------~~~~~~~~ 56 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNG---HDVIILDNLCNSKRSVLPVIE-------------RLG--------GKHPTFVE 56 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCTTHHHHHH-------------HHH--------TSCCEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEecCCCcchhHHHHHH-------------hhc--------CCcceEEE
Confidence 479999999999999999999998 677888775432 22222221 000 24678899
Q ss_pred ccCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceee
Q 008324 92 GDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~ 166 (570)
+|+++ .+..+.+++ ++|+|||+||..... +.....+++|+.|+.+++++|++. ++++|||+||+.++
T Consensus 57 ~Dl~~-------~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~ 128 (338)
T 1udb_A 57 GDIRN-------EALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATVY 128 (338)
T ss_dssp CCTTC-------HHHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGG
T ss_pred ccCCC-------HHHHHHHhhccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEccHHHh
Confidence 99994 444445554 599999999976432 345667899999999999999886 78899999999998
Q ss_pred cCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-
Q 008324 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (570)
Q Consensus 167 ~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~- 245 (570)
+...+ .++.|+.+. .+..+.|+.||+.+|.+++.+
T Consensus 129 g~~~~----~~~~e~~~~----------------------------------------~~~~~~Y~~sK~~~e~~~~~~~ 164 (338)
T 1udb_A 129 GDNPK----IPYVESFPT----------------------------------------GTPQSPYGKSKLMVEQILTDLQ 164 (338)
T ss_dssp CSCCS----SSBCTTSCC----------------------------------------CCCSSHHHHHHHHHHHHHHHHH
T ss_pred CCCCC----CCcCcccCC----------------------------------------CCCCChHHHHHHHHHHHHHHHH
Confidence 75321 122211111 022578999999999999876
Q ss_pred -c-cCCcEEEEecCceecCCCCCCCccccC--ccchHHHHHHHhc--CCceeeec------CCCeeeeeeehHHHHHHHH
Q 008324 246 -K-ENLSLVIIRPTVVSGTYKEPFPGWVED--LKTINTLFVASAQ--GNLRCLVG------ETKVIMDVIPVDMVVNAMI 313 (570)
Q Consensus 246 -~-~~lp~~IvRPsiV~g~~~ep~~gw~~~--~~~~~~~i~~~~~--G~~~~~~~------~~~~~~d~VpVDdva~aii 313 (570)
. .+++++|+||++|||+......|.... .......+..... +....+++ +++..+|+|||+|+|++++
T Consensus 165 ~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~ 244 (338)
T 1udb_A 165 KAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHV 244 (338)
T ss_dssp HHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHH
T ss_pred HhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHHHHHHH
Confidence 2 279999999999999854222221111 1222333433333 32223333 4677899999999999999
Q ss_pred HHHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 314 VAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 314 ~a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
.++....... .+++||++++ +++|+.|+++.+.+.++..
T Consensus 245 ~~l~~~~~~~-~~~~yni~~~--~~~s~~e~~~~i~~~~g~~ 283 (338)
T 1udb_A 245 VAMEKLANKP-GVHIYNLGAG--VGNSVLDVVNAFSKACGKP 283 (338)
T ss_dssp HHHHHHTTCC-EEEEEEESCS--CCEEHHHHHHHHHHHHTSC
T ss_pred HHHhhhhccC-CCcEEEecCC--CceeHHHHHHHHHHHhCCC
Confidence 9886432111 1379999998 8999999999999988754
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-28 Score=248.55 Aligned_cols=247 Identities=15% Similarity=0.165 Sum_probs=172.7
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
+|||||||||||++|+++|++.|. .+|+++.|+...... ..+ .++. +.+|
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~~~-~~~--------------------------~~~~-~~~d 50 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGI--TDILVVDNLKDGTKF-VNL--------------------------VDLN-IADY 50 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTC--CCEEEEECCSSGGGG-HHH--------------------------HTSC-CSEE
T ss_pred CEEEEcCccHHHHHHHHHHHHCCC--cEEEEEccCCCCchh-hhc--------------------------Ccce-eccc
Confidence 589999999999999999999872 457888887654211 111 1122 6788
Q ss_pred CCCCCCCCCchhhHHHHhCC-----ccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeec
Q 008324 94 ISSEDLGLKDSNLKEELWNE-----LDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 94 l~~~~lgls~~~~~~~l~~~-----vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~ 167 (570)
++ +.+..+.++++ +|+|||+||.... .+..+..+++|+.|+.+++++|++. ++ +|||+||.++++
T Consensus 51 ~~-------~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~g 121 (310)
T 1eq2_A 51 MD-------KEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYG 121 (310)
T ss_dssp EE-------HHHHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGGGGT
T ss_pred cc-------cHHHHHHHHhccccCCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeHHHhC
Confidence 88 55555677764 9999999998754 3567788999999999999999997 77 999999999988
Q ss_pred CCCc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-
Q 008324 168 ERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (570)
Q Consensus 168 ~~~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~- 245 (570)
...+ .++|.. + ..+.+.|+.||..+|.++.++
T Consensus 122 ~~~~~~~~E~~-----~-----------------------------------------~~p~~~Y~~sK~~~e~~~~~~~ 155 (310)
T 1eq2_A 122 GRTSDFIESRE-----Y-----------------------------------------EKPLNVYGYSKFLFDEYVRQIL 155 (310)
T ss_dssp TCCSCBCSSGG-----G-----------------------------------------CCCSSHHHHHHHHHHHHHHHHG
T ss_pred CCCCCCCCCCC-----C-----------------------------------------CCCCChhHHHHHHHHHHHHHHH
Confidence 6432 223321 1 134578999999999999887
Q ss_pred -ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCe-eeeeeehHHHHHHHHHHHHHhhCCC
Q 008324 246 -KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKV-IMDVIPVDMVVNAMIVAMVAHAKQP 323 (570)
Q Consensus 246 -~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~-~~d~VpVDdva~aii~a~~~~~~~~ 323 (570)
..+++++++||+.|||+...+.... ......++..+..|....++++++. ..+++|++|+|++++.++....
T Consensus 156 ~~~g~~~~~lrp~~v~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~--- 229 (310)
T 1eq2_A 156 PEANSQIVGFRYFNVYGPREGHKGSM---ASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV--- 229 (310)
T ss_dssp GGCSSCEEEEEECEEESSSCGGGGGG---SCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC---
T ss_pred HHcCCCEEEEeCCcEECcCCCCCCcc---chHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC---
Confidence 3479999999999999875321100 1223345555666765566778888 8999999999999999886321
Q ss_pred CCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 324 SDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 324 ~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
+++||++++ .++|+.|+++.+.+.++..
T Consensus 230 --~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 257 (310)
T 1eq2_A 230 --SGIFNLGTG--RAESFQAVADATLAYHKKG 257 (310)
T ss_dssp --CEEEEESCS--CCBCHHHHHHHC-------
T ss_pred --CCeEEEeCC--CccCHHHHHHHHHHHcCCC
Confidence 579999998 8899999999999888754
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.4e-28 Score=248.01 Aligned_cols=246 Identities=14% Similarity=0.104 Sum_probs=181.2
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+|+|||||||||||++|+++|++.| .+|+++.|+.
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g---~~v~~~~r~~----------------------------------------- 37 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRG---DVELVLRTRD----------------------------------------- 37 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCT---TEEEECCCTT-----------------------------------------
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCC---CeEEEEecCc-----------------------------------------
Confidence 46899999999999999999999988 5667766531
Q ss_pred eccCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCc----cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecce
Q 008324 91 PGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF----DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f----~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~ 164 (570)
.+|++ +.+....+++ ++|+|||+||.... .......+++|+.|+.+++++|++. ++++|||+||..
T Consensus 38 ~~D~~-------d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~ 109 (321)
T 1e6u_A 38 ELNLL-------DSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSC 109 (321)
T ss_dssp TCCTT-------CHHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGG
T ss_pred cCCcc-------CHHHHHHHHHhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccHH
Confidence 26877 4444557777 89999999998752 3456778999999999999999996 789999999999
Q ss_pred eecCCC-cccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCC-CchHHHHHHHHHHHH
Q 008324 165 VAGERT-GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW-PNTYVFTKTMGEMLM 242 (570)
Q Consensus 165 v~~~~~-g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~n~Y~~sK~~aE~lv 242 (570)
+++... +.++|..... .+. .+ .+.|+.||..+|.++
T Consensus 110 vyg~~~~~~~~E~~~~~-~~~-----------------------------------------~p~~~~Y~~sK~~~E~~~ 147 (321)
T 1e6u_A 110 IYPKLAKQPMAESELLQ-GTL-----------------------------------------EPTNEPYAIAKIAGIKLC 147 (321)
T ss_dssp GSCTTCCSSBCGGGTTS-SCC-----------------------------------------CGGGHHHHHHHHHHHHHH
T ss_pred HcCCCCCCCcCcccccc-CCC-----------------------------------------CCCCCccHHHHHHHHHHH
Confidence 998642 1233321100 000 11 248999999999999
Q ss_pred HHh--ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHh----cC-CceeeecCCCeeeeeeehHHHHHHHHHH
Q 008324 243 QQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASA----QG-NLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (570)
Q Consensus 243 ~~~--~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~----~G-~~~~~~~~~~~~~d~VpVDdva~aii~a 315 (570)
..+ ..+++++|+||+.|||+...+.+.. ......++..+. .| ....++++++...++|||||+|++++.+
T Consensus 148 ~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~ 224 (321)
T 1e6u_A 148 ESYNRQYGRDYRSVMPTNLYGPHDNFHPSN---SHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHV 224 (321)
T ss_dssp HHHHHHHCCEEEEEEECEEESTTCCCCTTC---SSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEEEeCCcCCcCCCCCCCC---CccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHH
Confidence 876 3489999999999999876432110 011223333332 34 3445678888999999999999999998
Q ss_pred HHHhhCC-----CCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 316 MVAHAKQ-----PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 316 ~~~~~~~-----~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
+...... ...+++||++++ .++|+.|+++.+.+.++..
T Consensus 225 ~~~~~~~~~~~~~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 267 (321)
T 1e6u_A 225 MELAHEVWLENTQPMLSHINVGTG--VDCTIRELAQTIAKVVGYK 267 (321)
T ss_dssp HHSCHHHHHHTSBTTBCCEEESCS--CCEEHHHHHHHHHHHHTCC
T ss_pred HhCcccccccccccCCceEEeCCC--CCccHHHHHHHHHHHhCCC
Confidence 8632210 012479999998 8899999999999998864
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-27 Score=248.79 Aligned_cols=242 Identities=18% Similarity=0.224 Sum_probs=182.7
Q ss_pred CCcccHHhhcCCCEEEEECCcchhHHHHHHHHHHh-CCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhcccc
Q 008324 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRL 79 (570)
Q Consensus 1 ~~~~~i~~~~~~k~VlITGaTGFlG~~LvekLl~~-~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~ 79 (570)
|.++++.++++||+|||||||||||++|+++|++. |+ .+|+++.|+.... +.+. .+.+
T Consensus 10 ~~~~~~~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~--~~V~~~~r~~~~~---~~~~-------------~~~~--- 68 (344)
T 2gn4_A 10 MSMPNHQNMLDNQTILITGGTGSFGKCFVRKVLDTTNA--KKIIVYSRDELKQ---SEMA-------------MEFN--- 68 (344)
T ss_dssp ------CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCC--SEEEEEESCHHHH---HHHH-------------HHHC---
T ss_pred CCCccHHHhhCCCEEEEECCCcHHHHHHHHHHHhhCCC--CEEEEEECChhhH---HHHH-------------HHhc---
Confidence 45677889999999999999999999999999998 73 4889999964321 1111 1111
Q ss_pred ccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHHccCceE
Q 008324 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKV 156 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f---~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~ 156 (570)
..++.++.+|++ +.+....+++++|+|||+||.... .......+++|+.|+.+++++|.+. ++++
T Consensus 69 ----~~~v~~~~~Dl~-------d~~~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~-~v~~ 136 (344)
T 2gn4_A 69 ----DPRMRFFIGDVR-------DLERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKN-AISQ 136 (344)
T ss_dssp ----CTTEEEEECCTT-------CHHHHHHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCSE
T ss_pred ----CCCEEEEECCCC-------CHHHHHHHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhC-CCCE
Confidence 257899999999 555566888899999999997652 2345678999999999999999997 8999
Q ss_pred EEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHH
Q 008324 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (570)
Q Consensus 157 ~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
||++||..++ .+.+.|+.||+
T Consensus 137 ~V~~SS~~~~-----------------------------------------------------------~p~~~Y~~sK~ 157 (344)
T 2gn4_A 137 VIALSTDKAA-----------------------------------------------------------NPINLYGATKL 157 (344)
T ss_dssp EEEECCGGGS-----------------------------------------------------------SCCSHHHHHHH
T ss_pred EEEecCCccC-----------------------------------------------------------CCccHHHHHHH
Confidence 9999995321 12478999999
Q ss_pred HHHHHHHHhc-----cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCC-ceeeecCCCeeeeeeehHHHHH
Q 008324 237 MGEMLMQQSK-----ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGN-LRCLVGETKVIMDVIPVDMVVN 310 (570)
Q Consensus 237 ~aE~lv~~~~-----~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~-~~~~~~~~~~~~d~VpVDdva~ 310 (570)
.+|.++..+. .+++++++||+.|+|+... ....++..+..|. ...+ .+++..+++++++|+|+
T Consensus 158 ~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~----------~i~~~~~~~~~g~~~~~i-~~~~~~r~~i~v~D~a~ 226 (344)
T 2gn4_A 158 CSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGS----------VVPFFKKLVQNKASEIPI-TDIRMTRFWITLDEGVS 226 (344)
T ss_dssp HHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTS----------HHHHHHHHHHHTCCCEEE-SCTTCEEEEECHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCC----------HHHHHHHHHHcCCCceEE-eCCCeEEeeEEHHHHHH
Confidence 9999998873 5799999999999997532 1223344455565 3233 47778899999999999
Q ss_pred HHHHHHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhc
Q 008324 311 AMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYF 352 (570)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~ 352 (570)
+++.++... . .+++|+++++ ++++.|+++.+.+.+
T Consensus 227 ~v~~~l~~~--~--~g~~~~~~~~---~~s~~el~~~i~~~~ 261 (344)
T 2gn4_A 227 FVLKSLKRM--H--GGEIFVPKIP---SMKMTDLAKALAPNT 261 (344)
T ss_dssp HHHHHHHHC--C--SSCEEEECCC---EEEHHHHHHHHCTTC
T ss_pred HHHHHHhhc--c--CCCEEecCCC---cEEHHHHHHHHHHhC
Confidence 999988632 1 2679998764 699999999998654
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-27 Score=246.99 Aligned_cols=248 Identities=20% Similarity=0.269 Sum_probs=187.8
Q ss_pred cHHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccC
Q 008324 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 5 ~i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
+-++.++||+|||||||||||++|+++|++.| .+|+++.|....... + ... .
T Consensus 13 ~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~-------~----------------~~~--l 64 (330)
T 2pzm_A 13 GLVPRGSHMRILITGGAGCLGSNLIEHWLPQG---HEILVIDNFATGKRE-------V----------------LPP--V 64 (330)
T ss_dssp -CCSTTTCCEEEEETTTSHHHHHHHHHHGGGT---CEEEEEECCSSSCGG-------G----------------SCS--C
T ss_pred CCcccCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCCccchh-------h----------------hhc--c
Confidence 34567889999999999999999999999998 688999996543210 0 000 1
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCcc--ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEE
Q 008324 85 EKITFVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD--ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~--~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~v 160 (570)
.++.++.+|++ +.+..+.+++ ++|+|||+||..... +.++ +++|+.|+.+++++|.+. ++++|||+
T Consensus 65 ~~v~~~~~Dl~-------d~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~-~~~~iV~~ 134 (330)
T 2pzm_A 65 AGLSVIEGSVT-------DAGLLERAFDSFKPTHVVHSAAAYKDPDDWAED--AATNVQGSINVAKAASKA-GVKRLLNF 134 (330)
T ss_dssp TTEEEEECCTT-------CHHHHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHH-TCSEEEEE
T ss_pred CCceEEEeeCC-------CHHHHHHHHhhcCCCEEEECCccCCCccccChh--HHHHHHHHHHHHHHHHHc-CCCEEEEe
Confidence 57889999999 4554557777 899999999987542 2333 899999999999999986 78999999
Q ss_pred ecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHH
Q 008324 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (570)
Q Consensus 161 STa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~ 240 (570)
||..+++...+. +.+++|+. .+.+.|+.||+.+|.
T Consensus 135 SS~~~~~~~~~~--~~~~~E~~-------------------------------------------~~~~~Y~~sK~~~e~ 169 (330)
T 2pzm_A 135 QTALCYGRPATV--PIPIDSPT-------------------------------------------APFTSYGISKTAGEA 169 (330)
T ss_dssp EEGGGGCSCSSS--SBCTTCCC-------------------------------------------CCCSHHHHHHHHHHH
T ss_pred cCHHHhCCCccC--CCCcCCCC-------------------------------------------CCCChHHHHHHHHHH
Confidence 999998764320 01222111 134789999999999
Q ss_pred HHHHhccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHH-HHHHHHHHh
Q 008324 241 LMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN-AMIVAMVAH 319 (570)
Q Consensus 241 lv~~~~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~-aii~a~~~~ 319 (570)
+++.+ +++.+++||+.+||+... . .....++..+..|. ..++++. ..++++++|+|+ +++.++..
T Consensus 170 ~~~~~--~~~~~~iR~~~v~gp~~~--~------~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~~- 235 (330)
T 2pzm_A 170 FLMMS--DVPVVSLRLANVTGPRLA--I------GPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQEG- 235 (330)
T ss_dssp HHHTC--SSCEEEEEECEEECTTCC--S------SHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTSTT-
T ss_pred HHHHc--CCCEEEEeeeeeECcCCC--C------CHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHhhc-
Confidence 99986 899999999999997631 1 12223444455555 4456666 899999999999 99888752
Q ss_pred hCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 320 AKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 320 ~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
+. +++||++++ .++++.|+++.+.+.++..
T Consensus 236 ---~~-g~~~~v~~~--~~~s~~e~~~~i~~~~g~~ 265 (330)
T 2pzm_A 236 ---RP-TGVFNVSTG--EGHSIKEVFDVVLDYVGAT 265 (330)
T ss_dssp ---CC-CEEEEESCS--CCEEHHHHHHHHHHHHTCC
T ss_pred ---CC-CCEEEeCCC--CCCCHHHHHHHHHHHhCCC
Confidence 22 689999998 8899999999999998875
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-27 Score=246.21 Aligned_cols=244 Identities=22% Similarity=0.217 Sum_probs=181.0
Q ss_pred cHHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccC
Q 008324 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 5 ~i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
+....+++|+|||||||||||++|+++|++.| .+|+++.|...... +.+ .. .
T Consensus 14 ~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~--~~l---------------------~~--~ 65 (333)
T 2q1w_A 14 LVPRGSHMKKVFITGICGQIGSHIAELLLERG---DKVVGIDNFATGRR--EHL---------------------KD--H 65 (333)
T ss_dssp -------CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCG--GGS---------------------CC--C
T ss_pred eeeecCCCCEEEEeCCccHHHHHHHHHHHHCC---CEEEEEECCCccch--hhH---------------------hh--c
Confidence 45567889999999999999999999999988 68899999754321 000 00 1
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhCC--ccEEEEcCccCCcc--ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEE
Q 008324 85 EKITFVPGDISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKFD--ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgls~~~~~~~l~~~--vdiViH~AA~v~f~--~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~v 160 (570)
.++.++.+|++ +.+..+.++++ +|+|||+||..... +..+ +++|+.|+.+++++|.+. ++++||++
T Consensus 66 ~~~~~~~~Dl~-------d~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~-~~~~iV~~ 135 (333)
T 2q1w_A 66 PNLTFVEGSIA-------DHALVNQLIGDLQPDAVVHTAASYKDPDDWYND--TLTNCVGGSNVVQAAKKN-NVGRFVYF 135 (333)
T ss_dssp TTEEEEECCTT-------CHHHHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHT-TCSEEEEE
T ss_pred CCceEEEEeCC-------CHHHHHHHHhccCCcEEEECceecCCCccCChH--HHHHHHHHHHHHHHHHHh-CCCEEEEE
Confidence 57889999999 44545567776 99999999986542 2223 899999999999999986 78999999
Q ss_pred ecceeec----CCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC-chHHHHH
Q 008324 161 STAYVAG----ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP-NTYVFTK 235 (570)
Q Consensus 161 STa~v~~----~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-n~Y~~sK 235 (570)
||..+++ ...+.++|. + .+. +.|+.||
T Consensus 136 SS~~~~g~~~~~~~~~~~E~-----~-------------------------------------------~p~~~~Y~~sK 167 (333)
T 2q1w_A 136 QTALCYGVKPIQQPVRLDHP-----R-------------------------------------------NPANSSYAISK 167 (333)
T ss_dssp EEGGGGCSCCCSSSBCTTSC-----C-------------------------------------------CCTTCHHHHHH
T ss_pred CcHHHhCCCcccCCCCcCCC-----C-------------------------------------------CCCCCchHHHH
Confidence 9999987 322112221 1 123 7899999
Q ss_pred HHHHHHHHH-hccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHH
Q 008324 236 TMGEMLMQQ-SKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (570)
Q Consensus 236 ~~aE~lv~~-~~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~ 314 (570)
+.+|.+++. +. +++++||+.|||+... . .....++..+..|. .+++ ++...++++++|+|++++.
T Consensus 168 ~~~E~~~~~s~~---~~~ilR~~~v~gp~~~--~------~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~~ 233 (333)
T 2q1w_A 168 SANEDYLEYSGL---DFVTFRLANVVGPRNV--S------GPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLARATVR 233 (333)
T ss_dssp HHHHHHHHHHTC---CEEEEEESEEESTTCC--S------SHHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHHH
T ss_pred HHHHHHHHhhhC---CeEEEeeceEECcCCc--C------cHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHHH
Confidence 999999988 65 8999999999998621 1 12233444555565 3445 6678999999999999998
Q ss_pred HHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 315 AMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 315 a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
++.. +. +++||++++ .++++.|+++.+.+.++..
T Consensus 234 ~~~~----~~-g~~~~v~~~--~~~s~~e~~~~i~~~~g~~ 267 (333)
T 2q1w_A 234 AVDG----VG-HGAYHFSSG--TDVAIKELYDAVVEAMALP 267 (333)
T ss_dssp HHTT----CC-CEEEECSCS--CCEEHHHHHHHHHHHTTCS
T ss_pred HHhc----CC-CCEEEeCCC--CCccHHHHHHHHHHHhCCC
Confidence 8852 12 689999998 8899999999999998865
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-27 Score=243.66 Aligned_cols=247 Identities=17% Similarity=0.142 Sum_probs=182.1
Q ss_pred EEEEECCcchhHHHHHHHHHHh--CCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 14 TILVSGVTGFVAKVFIEKILRV--QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~--~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|||||||||||++|+++|++. + .+|+++.|+.... .++.++.
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g---~~V~~~~r~~~~~--------------------------------~~~~~~~ 45 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGK---KNVIASDIVQRDT--------------------------------GGIKFIT 45 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCG---GGEEEEESSCCCC--------------------------------TTCCEEE
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCC---CEEEEecCCCccc--------------------------------cCceEEE
Confidence 5899999999999999999998 6 5678888865321 1355789
Q ss_pred ccCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCc--cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeec
Q 008324 92 GDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF--DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f--~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~ 167 (570)
+|++ +.+....+++ ++|+|||+||.... .+.....+++|+.|+.+++++|++. ++++|||+||..+++
T Consensus 46 ~D~~-------d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~ 117 (317)
T 3ajr_A 46 LDVS-------NRDEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQH-RVEKVVIPSTIGVFG 117 (317)
T ss_dssp CCTT-------CHHHHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGCC
T ss_pred ecCC-------CHHHHHHHHhhcCCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHc-CCCEEEEecCHHHhC
Confidence 9999 4444556666 89999999997542 2456778999999999999999986 789999999999998
Q ss_pred CCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--
Q 008324 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (570)
Q Consensus 168 ~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~-- 245 (570)
.... ..+.+++++. .+.+.|+.||..+|.+++.+
T Consensus 118 ~~~~---~~~~~e~~~~-----------------------------------------~p~~~Y~~sK~~~e~~~~~~~~ 153 (317)
T 3ajr_A 118 PETP---KNKVPSITIT-----------------------------------------RPRTMFGVTKIAAELLGQYYYE 153 (317)
T ss_dssp TTSC---SSSBCSSSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCC---CCCccccccC-----------------------------------------CCCchHHHHHHHHHHHHHHHHH
Confidence 6321 0111111111 34578999999999999876
Q ss_pred ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCC
Q 008324 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~ 325 (570)
..+++++++||+.+||+...|..+..+ .....+.....+.....+++++...++++++|+|++++.++.........
T Consensus 154 ~~~~~~~~lR~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~~~ 230 (317)
T 3ajr_A 154 KFGLDVRSLRYPGIISYKAEPTAGTTD---YAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKLVL 230 (317)
T ss_dssp HHCCEEEEEEECEEECSSSCCCSCSST---HHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGCSS
T ss_pred hcCCeEEEEecCcEeccCCCCCCcchh---HHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCcccccc
Confidence 348999999999999987644322211 12233344334333455677788999999999999999888633211112
Q ss_pred CceEEecCCCCCcccHHHHHHHHhhhcc
Q 008324 326 ANIYHVGSSLRNPVTLVSILDYGFVYFT 353 (570)
Q Consensus 326 ~~iyni~s~~~~pit~~~l~~~i~~~~~ 353 (570)
+++||+++ .++|+.|+++.+.+.++
T Consensus 231 g~~~~i~~---~~~s~~e~~~~i~~~~~ 255 (317)
T 3ajr_A 231 RNGYNVTA---YTFTPSELYSKIKERIP 255 (317)
T ss_dssp CSCEECCS---EEECHHHHHHHHHTTCC
T ss_pred CceEecCC---ccccHHHHHHHHHHHCC
Confidence 47999985 47999999999998876
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.5e-27 Score=243.08 Aligned_cols=257 Identities=16% Similarity=0.138 Sum_probs=189.9
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+||+|||||||||||++|+++|++.| .+|+++.|+...... +++. ++ + ...++.++
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G---~~V~~~~r~~~~~~~-~~~~-~~-------------~------~~~~~~~~ 57 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKG---YEVYGADRRSGEFAS-WRLK-EL-------------G------IENDVKII 57 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECSCCSTTTT-HHHH-HT-------------T------CTTTEEEC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEECCCccccc-ccHh-hc-------------c------ccCceeEE
Confidence 58999999999999999999999998 688999998654321 2222 00 0 02478899
Q ss_pred eccCCCCCCCCCchhhHHHHhCC--ccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHHccCc-eEEEEEecce
Q 008324 91 PGDISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKL-KVFVHVSTAY 164 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~--vdiViH~AA~v~f---~~~~~~~~~~Nv~gt~~ll~la~~~~~l-~~~V~vSTa~ 164 (570)
.+|++ +.+....++++ +|+|||+||.... .+.++..+++|+.|+.+++++|.++ ++ ++|||+||.+
T Consensus 58 ~~Dl~-------d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~ 129 (345)
T 2z1m_A 58 HMDLL-------EFSNIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTV-KPDTKFYQASTSE 129 (345)
T ss_dssp CCCTT-------CHHHHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTCEEEEEEEGG
T ss_pred ECCCC-------CHHHHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEEechh
Confidence 99999 44444566664 6999999998653 2457788999999999999999987 66 8999999999
Q ss_pred eecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHH
Q 008324 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (570)
Q Consensus 165 v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~ 244 (570)
+||...+ .++.|+.+. .+.+.|+.||+.+|.+++.
T Consensus 130 vyg~~~~----~~~~e~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~ 164 (345)
T 2z1m_A 130 MFGKVQE----IPQTEKTPF-----------------------------------------YPRSPYAVAKLFGHWITVN 164 (345)
T ss_dssp GGCSCSS----SSBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHH
T ss_pred hcCCCCC----CCCCccCCC-----------------------------------------CCCChhHHHHHHHHHHHHH
Confidence 9986432 122211111 3357899999999999987
Q ss_pred h--ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCc-eeeecCCCeeeeeeehHHHHHHHHHHHHHhhC
Q 008324 245 S--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNL-RCLVGETKVIMDVIPVDMVVNAMIVAMVAHAK 321 (570)
Q Consensus 245 ~--~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~-~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~ 321 (570)
+ ..+++++++|+..++|+.... .+. ......++..+..|.. ....++++...++++++|+|++++.++...
T Consensus 165 ~~~~~~~~~~~~r~~~~~gpg~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~-- 238 (345)
T 2z1m_A 165 YREAYNMFACSGILFNHESPLRGI--EFV--TRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQP-- 238 (345)
T ss_dssp HHHHHCCCEEEEEECCEECTTSCT--TSH--HHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSS--
T ss_pred HHHHhCCceEeeeeeeecCCCCCC--cch--hHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCC--
Confidence 6 337999999999999975421 110 0112233444455643 345688888999999999999999988521
Q ss_pred CCCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 322 QPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 322 ~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
. +++||++++ .++++.|+++.+.+.++..
T Consensus 239 -~--~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 267 (345)
T 2z1m_A 239 -E--PDDYVIATG--ETHTVREFVEKAAKIAGFD 267 (345)
T ss_dssp -S--CCCEEECCS--CCEEHHHHHHHHHHHTTCC
T ss_pred -C--CceEEEeCC--CCccHHHHHHHHHHHhCCC
Confidence 1 368999998 8999999999999998864
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-27 Score=245.30 Aligned_cols=240 Identities=17% Similarity=0.101 Sum_probs=158.0
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|||||||||||++|+++|++.| .+|+++.|+... ++ ++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~---------------------------------~~--~~~ 43 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNN---WHAVGCGFRRAR---------------------------------PK--FEQ 43 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTT---CEEEEEC---------------------------------------------
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCC---CeEEEEccCCCC---------------------------------CC--eEE
Confidence 6899999999999999999999988 688999885421 11 567
Q ss_pred ccCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceee
Q 008324 92 GDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f---~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~ 166 (570)
+|++++ +....+++ ++|+|||+||.... .+.++..+++|+.|+.+++++|.+. +. +|||+||.+++
T Consensus 44 ~Dl~d~-------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~ 114 (315)
T 2ydy_A 44 VNLLDS-------NAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAV-GA-FLIYISSDYVF 114 (315)
T ss_dssp ---------------CHHHHHHHCCSEEEECC-------------------CHHHHHHHHHHHHH-TC-EEEEEEEGGGS
T ss_pred ecCCCH-------HHHHHHHHhhCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchHHHc
Confidence 899853 22334444 48999999998654 2456778999999999999999986 55 89999999998
Q ss_pred cCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhc
Q 008324 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSK 246 (570)
Q Consensus 167 ~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~ 246 (570)
+...+.++|. ++. .+.+.|+.||..+|.+++.+
T Consensus 115 ~~~~~~~~E~-----~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~~- 147 (315)
T 2ydy_A 115 DGTNPPYREE-----DIP-----------------------------------------APLNLYGKTKLDGEKAVLEN- 147 (315)
T ss_dssp CSSSCSBCTT-----SCC-----------------------------------------CCCSHHHHHHHHHHHHHHHH-
T ss_pred CCCCCCCCCC-----CCC-----------------------------------------CCcCHHHHHHHHHHHHHHHh-
Confidence 8633333332 211 33578999999999999985
Q ss_pred cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHh-cCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCC
Q 008324 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASA-QGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~-~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~ 325 (570)
+++++++||+.|||+...+..+++. .++.... .|....+. ++...++++++|+|++++.++.........
T Consensus 148 -~~~~~~lR~~~v~G~~~~~~~~~~~------~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~ 218 (315)
T 2ydy_A 148 -NLGAAVLRIPILYGEVEKLEESAVT------VMFDKVQFSNKSANMD--HWQQRFPTHVKDVATVCRQLAEKRMLDPSI 218 (315)
T ss_dssp -CTTCEEEEECSEECSCSSGGGSTTG------GGHHHHHCCSSCEEEE--CSSBBCCEEHHHHHHHHHHHHHHHHTCTTC
T ss_pred -CCCeEEEeeeeeeCCCCcccccHHH------HHHHHHHhcCCCeeec--cCceECcEEHHHHHHHHHHHHHhhccccCC
Confidence 4678999999999987642212222 2233333 45443333 357789999999999999988643111123
Q ss_pred CceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 326 ANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 326 ~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
+++||++++ .++++.|+++.+.+.++..+
T Consensus 219 ~~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 247 (315)
T 2ydy_A 219 KGTFHWSGN--EQMTKYEMACAIADAFNLPS 247 (315)
T ss_dssp CEEEECCCS--CCBCHHHHHHHHHHHTTCCC
T ss_pred CCeEEEcCC--CcccHHHHHHHHHHHhCCCh
Confidence 689999998 89999999999999988753
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.9e-27 Score=238.82 Aligned_cols=224 Identities=20% Similarity=0.249 Sum_probs=176.3
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
+|||||||||||++|+++|++.| ++|+++.|. .+|
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~------------------------------------------~~D 41 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEE---YDIYPFDKK------------------------------------------LLD 41 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTT---EEEEEECTT------------------------------------------TSC
T ss_pred EEEEECCCCHHHHHHHHHHHhCC---CEEEEeccc------------------------------------------ccC
Confidence 89999999999999999999988 688888871 378
Q ss_pred CCCCCCCCCchhhHHHHhC--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecC
Q 008324 94 ISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (570)
Q Consensus 94 l~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~ 168 (570)
++ +.+....+++ ++|+|||+||..... +.+...+++|+.|+.+++++|++. ++ +|||+||.++++.
T Consensus 42 ~~-------d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~SS~~vy~~ 112 (287)
T 3sc6_A 42 IT-------NISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLV-GA-KLVYISTDYVFQG 112 (287)
T ss_dssp TT-------CHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGSCC
T ss_pred CC-------CHHHHHHHHHhcCCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchhhhcCC
Confidence 77 4444556666 699999999987643 467888999999999999999997 66 6999999999986
Q ss_pred CCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccC
Q 008324 169 RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKEN 248 (570)
Q Consensus 169 ~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~ 248 (570)
..+ .+++|+++. .+.+.|+.||..+|++++.+.
T Consensus 113 ~~~----~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~~~-- 145 (287)
T 3sc6_A 113 DRP----EGYDEFHNP-----------------------------------------APINIYGASKYAGEQFVKELH-- 145 (287)
T ss_dssp CCS----SCBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHC--
T ss_pred CCC----CCCCCCCCC-----------------------------------------CCCCHHHHHHHHHHHHHHHhC--
Confidence 432 223222221 345789999999999999864
Q ss_pred CcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCce
Q 008324 249 LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANI 328 (570)
Q Consensus 249 lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~i 328 (570)
.+++++||+.|||+... .....++.....|....+.++ ...+++|++|+|++++.++.. +. +++
T Consensus 146 ~~~~ilR~~~v~G~~~~---------~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~----~~-~~~ 209 (287)
T 3sc6_A 146 NKYFIVRTSWLYGKYGN---------NFVKTMIRLGKEREEISVVAD--QIGSPTYVADLNVMINKLIHT----SL-YGT 209 (287)
T ss_dssp SSEEEEEECSEECSSSC---------CHHHHHHHHHTTCSEEEEECS--CEECCEEHHHHHHHHHHHHTS----CC-CEE
T ss_pred CCcEEEeeeeecCCCCC---------cHHHHHHHHHHcCCCeEeecC--cccCceEHHHHHHHHHHHHhC----CC-CCe
Confidence 37899999999997542 123344555555665555554 789999999999999998852 11 569
Q ss_pred EEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 329 YHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 329 yni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
||++++ .++|+.|+++.+.+.++..+
T Consensus 210 ~~i~~~--~~~s~~e~~~~i~~~~g~~~ 235 (287)
T 3sc6_A 210 YHVSNT--GSCSWFEFAKKIFSYANMKV 235 (287)
T ss_dssp EECCCB--SCEEHHHHHHHHHHHHTCCC
T ss_pred EEEcCC--CcccHHHHHHHHHHHcCCCc
Confidence 999998 88999999999999998753
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-27 Score=248.37 Aligned_cols=260 Identities=17% Similarity=0.175 Sum_probs=188.2
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|++.| .+|+++.|+...... +++. ++ .+.+.. ....++.++.+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~-~~~~-~l-----~~~~~~--------~~~~~~~~~~~ 86 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKG---YEVHGIVRRSSSFNT-GRIE-HL-----YKNPQA--------HIEGNMKLHYG 86 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSSCCC-TTTG-GG-----C-----------------CEEEEEC
T ss_pred cEEEEECCCchHHHHHHHHHHHCC---CEEEEEECCccccch-hhHH-HH-----hhhhcc--------ccCCCceEEEc
Confidence 589999999999999999999988 688999997643110 0110 00 000000 00257889999
Q ss_pred cCCCCCCCCCchhhHHHHhCC--ccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCc---eEEEEEecce
Q 008324 93 DISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKL---KVFVHVSTAY 164 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~--vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l---~~~V~vSTa~ 164 (570)
|+++ .+....++++ +|+|||+||..... +.++..+++|+.|+.+++++|++. ++ ++|||+||.+
T Consensus 87 Dl~d-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~~~~iv~~SS~~ 158 (375)
T 1t2a_A 87 DLTD-------STCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC-GLINSVKFYQASTSE 158 (375)
T ss_dssp CTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEEGG
T ss_pred cCCC-------HHHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCccceEEEecchh
Confidence 9994 4444566654 79999999987643 456778999999999999999986 65 7999999999
Q ss_pred eecCCCc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHH
Q 008324 165 VAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (570)
Q Consensus 165 v~~~~~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~ 243 (570)
+++...+ .++|. ++. .+.+.|+.||+.+|.+++
T Consensus 159 ~~~~~~~~~~~E~-----~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~ 192 (375)
T 1t2a_A 159 LYGKVQEIPQKET-----TPF-----------------------------------------YPRSPYGAAKLYAYWIVV 192 (375)
T ss_dssp GTCSCSSSSBCTT-----SCC-----------------------------------------CCCSHHHHHHHHHHHHHH
T ss_pred hhCCCCCCCCCcc-----CCC-----------------------------------------CCCChhHHHHHHHHHHHH
Confidence 9886432 22222 211 235789999999999998
Q ss_pred Hh--ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCc-eeeecCCCeeeeeeehHHHHHHHHHHHHHhh
Q 008324 244 QS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNL-RCLVGETKVIMDVIPVDMVVNAMIVAMVAHA 320 (570)
Q Consensus 244 ~~--~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~-~~~~~~~~~~~d~VpVDdva~aii~a~~~~~ 320 (570)
.+ ..+++++++||+.+||+...+ ++.. .....++..+..|.. ...+++++...++|||+|+|++++.++...
T Consensus 193 ~~~~~~~~~~~i~r~~~~~gp~~~~--~~~~--~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~- 267 (375)
T 1t2a_A 193 NFREAYNLFAVNGILFNHESPRRGA--NFVT--RKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQND- 267 (375)
T ss_dssp HHHHHHCCEEEEEEECCEECTTSCT--TSHH--HHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSS-
T ss_pred HHHHHhCCCEEEEecccccCCCCCC--Ccch--HHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHHhcC-
Confidence 76 348999999999999986521 1211 112334444555643 345688899999999999999999988622
Q ss_pred CCCCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 321 KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 321 ~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
. .++||++++ .++|+.|+++.+.+.++..
T Consensus 268 -~---~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 296 (375)
T 1t2a_A 268 -E---PEDFVIATG--EVHSVREFVEKSFLHIGKT 296 (375)
T ss_dssp -S---CCCEEECCS--CCEEHHHHHHHHHHHTTCC
T ss_pred -C---CceEEEeCC--CcccHHHHHHHHHHHhCCC
Confidence 1 368999998 8899999999999998764
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.3e-27 Score=241.26 Aligned_cols=262 Identities=16% Similarity=0.161 Sum_probs=168.7
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEc-CCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR-AADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR-~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
||+|||||||||||++|+++|++.| ++|++++| +.......+.+. ++ +. ...++.++
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~~-~~-------------~~-----~~~~~~~~ 58 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENG---YSVNTTIRADPERKRDVSFLT-NL-------------PG-----ASEKLHFF 58 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT---CEEEEECCCC----CCCHHHH-TS-------------TT-----HHHHEEEC
T ss_pred CCEEEEECChhHHHHHHHHHHHHCC---CEEEEEEeCCccchhHHHHHH-hh-------------hc-----cCCceEEE
Confidence 6899999999999999999999998 67888888 442111011111 00 00 01357889
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccc--cHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecC
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDE--RYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~--~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~ 168 (570)
.+|+++ .+..+.+++++|+|||+|+.+.+.. +.+..+++|+.||.+++++|.+..++++|||+||..++..
T Consensus 59 ~~Dl~d-------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~ 131 (322)
T 2p4h_X 59 NADLSN-------PDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSF 131 (322)
T ss_dssp CCCTTC-------GGGGHHHHTTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSC
T ss_pred ecCCCC-------HHHHHHHHcCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHccc
Confidence 999994 4444577889999999998764432 2345789999999999999998646899999999874322
Q ss_pred CCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc-hHHHHHHHHHHHHHHh--
Q 008324 169 RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN-TYVFTKTMGEMLMQQS-- 245 (570)
Q Consensus 169 ~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n-~Y~~sK~~aE~lv~~~-- 245 (570)
... .+.+++|+.+.+.+... . ..+.+ .|+.||.++|.++.++
T Consensus 132 ~~~--~~~~~~e~~~~~~~~~~---------------------~------------~~p~~~~Y~~sK~~~e~~~~~~~~ 176 (322)
T 2p4h_X 132 NGK--DKDVLDESDWSDVDLLR---------------------S------------VKPFGWNYAVSKTLAEKAVLEFGE 176 (322)
T ss_dssp SSS--CCSEECTTCCCCHHHHH---------------------H------------HCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCC--CCeecCCccccchhhhc---------------------c------------cCcccccHHHHHHHHHHHHHHHHH
Confidence 111 01122222222211100 0 01122 6999999999999876
Q ss_pred ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCC
Q 008324 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~ 325 (570)
..+++++++||+.|||+...+. .......+.....|....+ ++ ...++++++|+|++++.++.. .. ..
T Consensus 177 ~~gi~~~~lrp~~v~g~~~~~~------~~~~~~~~~~~~~g~~~~~-~~--~~~~~i~v~Dva~a~~~~~~~-~~--~~ 244 (322)
T 2p4h_X 177 QNGIDVVTLILPFIVGRFVCPK------LPDSIEKALVLVLGKKEQI-GV--TRFHMVHVDDVARAHIYLLEN-SV--PG 244 (322)
T ss_dssp HTTCCEEEEEECEEESCCCSSS------CCHHHHHHTHHHHSCGGGC-CE--EEEEEEEHHHHHHHHHHHHHS-CC--CC
T ss_pred hcCCcEEEEcCCceECCCCCCC------CCchHHHHHHHHhCCCccC-cC--CCcCEEEHHHHHHHHHHHhhC-cC--CC
Confidence 3589999999999999865321 1111111112223332222 22 334999999999999998852 11 12
Q ss_pred CceEEecCCCCCcccHHHHHHHHhhhcc
Q 008324 326 ANIYHVGSSLRNPVTLVSILDYGFVYFT 353 (570)
Q Consensus 326 ~~iyni~s~~~~pit~~~l~~~i~~~~~ 353 (570)
+ .|| +++ .++|+.|+++.+.+.++
T Consensus 245 g-~~~-~~~--~~~s~~e~~~~i~~~~~ 268 (322)
T 2p4h_X 245 G-RYN-CSP--FIVPIEEMSQLLSAKYP 268 (322)
T ss_dssp E-EEE-CCC--EEEEHHHHHHHHHHHCT
T ss_pred C-CEE-EcC--CCCCHHHHHHHHHHhCC
Confidence 3 498 455 68999999999988764
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.3e-27 Score=238.27 Aligned_cols=224 Identities=17% Similarity=0.175 Sum_probs=174.1
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.|+|||||| ||||++|+++|++.| ++|++++|+.... +.+. ..++.++.
T Consensus 5 ~~~ilVtGa-G~iG~~l~~~L~~~g---~~V~~~~r~~~~~---~~~~------------------------~~~~~~~~ 53 (286)
T 3ius_A 5 TGTLLSFGH-GYTARVLSRALAPQG---WRIIGTSRNPDQM---EAIR------------------------ASGAEPLL 53 (286)
T ss_dssp CCEEEEETC-CHHHHHHHHHHGGGT---CEEEEEESCGGGH---HHHH------------------------HTTEEEEE
T ss_pred cCcEEEECC-cHHHHHHHHHHHHCC---CEEEEEEcChhhh---hhHh------------------------hCCCeEEE
Confidence 379999998 999999999999998 6889999976432 1111 15789999
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHc-cCceEEEEEecceeecCCC
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVSTAYVAGERT 170 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~-~~l~~~V~vSTa~v~~~~~ 170 (570)
+|+++. + ++++|+|||+||.....++ .+.+++++|++. .++++|||+||+.+|+...
T Consensus 54 ~D~~d~-------~-----~~~~d~vi~~a~~~~~~~~----------~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~ 111 (286)
T 3ius_A 54 WPGEEP-------S-----LDGVTHLLISTAPDSGGDP----------VLAALGDQIAARAAQFRWVGYLSTTAVYGDHD 111 (286)
T ss_dssp SSSSCC-------C-----CTTCCEEEECCCCBTTBCH----------HHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCT
T ss_pred eccccc-------c-----cCCCCEEEECCCccccccH----------HHHHHHHHHHhhcCCceEEEEeecceecCCCC
Confidence 999952 1 5789999999998655432 357889999885 4889999999999998754
Q ss_pred c-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccCC
Q 008324 171 G-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENL 249 (570)
Q Consensus 171 g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~l 249 (570)
+ .++|. .+. .+.+.|+.||..+|+++.++ .++
T Consensus 112 ~~~~~E~-----~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~~-~~~ 144 (286)
T 3ius_A 112 GAWVDET-----TPL-----------------------------------------TPTAARGRWRVMAEQQWQAV-PNL 144 (286)
T ss_dssp TCEECTT-----SCC-----------------------------------------CCCSHHHHHHHHHHHHHHHS-TTC
T ss_pred CCCcCCC-----CCC-----------------------------------------CCCCHHHHHHHHHHHHHHhh-cCC
Confidence 3 23332 221 34578999999999999987 689
Q ss_pred cEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceE
Q 008324 250 SLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIY 329 (570)
Q Consensus 250 p~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iy 329 (570)
+++|+||+.|||+...++. .+..|....+.++ +...++||++|+|++++.++.... .+++|
T Consensus 145 ~~~ilRp~~v~G~~~~~~~--------------~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~----~g~~~ 205 (286)
T 3ius_A 145 PLHVFRLAGIYGPGRGPFS--------------KLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPD----PGAVY 205 (286)
T ss_dssp CEEEEEECEEEBTTBSSST--------------TSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCC----TTCEE
T ss_pred CEEEEeccceECCCchHHH--------------HHhcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCC----CCCEE
Confidence 9999999999998764421 1233554445544 578899999999999999986322 36799
Q ss_pred EecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 330 HVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 330 ni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
|++++ +++|+.|+++.+.+.++..+
T Consensus 206 ~i~~~--~~~s~~e~~~~i~~~~g~~~ 230 (286)
T 3ius_A 206 NVCDD--EPVPPQDVIAYAAELQGLPL 230 (286)
T ss_dssp EECCS--CCBCHHHHHHHHHHHHTCCC
T ss_pred EEeCC--CCccHHHHHHHHHHHcCCCC
Confidence 99998 88999999999999998754
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.6e-27 Score=237.86 Aligned_cols=231 Identities=16% Similarity=0.104 Sum_probs=168.9
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|++.| ++|++++|++... . +..
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G---~~V~~l~R~~~~~---------------------------------~---~~~ 41 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARG---HEVTLVSRKPGPG---------------------------------R---ITW 41 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCTT---------------------------------E---EEH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCCCcC---------------------------------e---eec
Confidence 689999999999999999999999 6789999965321 1 111
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCC------ccc-cHHHHHHHhHHHHHHHHHHHHHcc-CceEEEEEecce
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITK------FDE-RYDVAFGINTLGVIHLVNFAKKCV-KLKVFVHVSTAY 164 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~------f~~-~~~~~~~~Nv~gt~~ll~la~~~~-~l~~~V~vSTa~ 164 (570)
| +.....++++|+|||+|+..- +++ ..+...+.|+.||.++++++++.+ +...||++||++
T Consensus 42 ~-----------~~~~~~l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~ 110 (298)
T 4b4o_A 42 D-----------ELAASGLPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVA 110 (298)
T ss_dssp H-----------HHHHHCCCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGG
T ss_pred c-----------hhhHhhccCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeee
Confidence 1 111244578999999998521 222 234567899999999999999873 345699999999
Q ss_pred eecCCCc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHH
Q 008324 165 VAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (570)
Q Consensus 165 v~~~~~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~ 243 (570)
+||+..+ .++|+ ++. ...+.|..+|...|....
T Consensus 111 vyg~~~~~~~~E~-----~p~-----------------------------------------~~~~~~~~~~~~~e~~~~ 144 (298)
T 4b4o_A 111 YYQPSLTAEYDED-----SPG-----------------------------------------GDFDFFSNLVTKWEAAAR 144 (298)
T ss_dssp GSCCCSSCCBCTT-----CCC-----------------------------------------SCSSHHHHHHHHHHHHHC
T ss_pred eecCCCCCccccc-----CCc-----------------------------------------cccchhHHHHHHHHHHHH
Confidence 9987542 22222 211 234567788887777654
Q ss_pred HhccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCC
Q 008324 244 QSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQP 323 (570)
Q Consensus 244 ~~~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~ 323 (570)
....+++++++||++|||+.. |+ ...++.....|.. ...+++++.+++|||||+|++++.++....
T Consensus 145 ~~~~~~~~~~~r~~~v~g~~~----~~------~~~~~~~~~~~~~-~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~--- 210 (298)
T 4b4o_A 145 LPGDSTRQVVVRSGVVLGRGG----GA------MGHMLLPFRLGLG-GPIGSGHQFFPWIHIGDLAGILTHALEANH--- 210 (298)
T ss_dssp CSSSSSEEEEEEECEEECTTS----HH------HHHHHHHHHTTCC-CCBTTSCSBCCEEEHHHHHHHHHHHHHCTT---
T ss_pred hhccCCceeeeeeeeEEcCCC----Cc------hhHHHHHHhcCCc-ceecccCceeecCcHHHHHHHHHHHHhCCC---
Confidence 446789999999999999753 11 2233333444443 446899999999999999999999886321
Q ss_pred CCCceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 324 SDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 324 ~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
...+||++++ +++|+.|+++.+.+.+++++
T Consensus 211 -~~g~yn~~~~--~~~t~~e~~~~ia~~lgrp~ 240 (298)
T 4b4o_A 211 -VHGVLNGVAP--SSATNAEFAQTFGAALGRRA 240 (298)
T ss_dssp -CCEEEEESCS--CCCBHHHHHHHHHHHHTCCC
T ss_pred -CCCeEEEECC--CccCHHHHHHHHHHHhCcCC
Confidence 2459999999 99999999999999998753
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-27 Score=241.05 Aligned_cols=233 Identities=20% Similarity=0.173 Sum_probs=177.9
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|+ .| ++|+++.|+.. .+.+
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g---~~V~~~~r~~~--------------------------------------~~~~ 38 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PV---GNLIALDVHSK--------------------------------------EFCG 38 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TT---SEEEEECTTCS--------------------------------------SSCC
T ss_pred CeEEEECCCCHHHHHHHHHhh-cC---CeEEEeccccc--------------------------------------cccc
Confidence 589999999999999999999 77 68899988541 2468
Q ss_pred cCCCCCCCCCchhhHHHHhCC--ccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeec
Q 008324 93 DISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~--vdiViH~AA~v~f---~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~ 167 (570)
|++ +.+....++++ +|+|||+||.... .+..+..+++|+.|+.+++++|++. ++ +|||+||.++++
T Consensus 39 D~~-------d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~vy~ 109 (299)
T 1n2s_A 39 DFS-------NPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET-GA-WVVHYSTDYVFP 109 (299)
T ss_dssp CTT-------CHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-TC-EEEEEEEGGGSC
T ss_pred cCC-------CHHHHHHHHHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEecccEEe
Confidence 988 44445566665 9999999998764 3567788999999999999999986 56 799999999998
Q ss_pred CCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcc
Q 008324 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE 247 (570)
Q Consensus 168 ~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~ 247 (570)
...+ .++.|+++. .+.+.|+.||..+|++++++.
T Consensus 110 ~~~~----~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~~~- 143 (299)
T 1n2s_A 110 GTGD----IPWQETDAT-----------------------------------------SPLNVYGKTKLAGEKALQDNC- 143 (299)
T ss_dssp CCTT----CCBCTTSCC-----------------------------------------CCSSHHHHHHHHHHHHHHHHC-
T ss_pred CCCC----CCCCCCCCC-----------------------------------------CCccHHHHHHHHHHHHHHHhC-
Confidence 6532 122222211 345789999999999999864
Q ss_pred CCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCc
Q 008324 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (570)
Q Consensus 248 ~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~ 327 (570)
.+++++||+.|||+... +....++..+..|......++ ...++++++|+|++++.++.........++
T Consensus 144 -~~~~ilRp~~v~G~~~~---------~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~ 211 (299)
T 1n2s_A 144 -PKHLIFRTSWVYAGKGN---------NFAKTMLRLAKERQTLSVIND--QYGAPTGAELLADCTAHAIRVALNKPEVAG 211 (299)
T ss_dssp -SSEEEEEECSEECSSSC---------CHHHHHHHHHHHCSEEEEECS--CEECCEEHHHHHHHHHHHHHHHHHCGGGCE
T ss_pred -CCeEEEeeeeecCCCcC---------cHHHHHHHHHhcCCCEEeecC--cccCCeeHHHHHHHHHHHHHHhccccccCc
Confidence 38999999999998642 122334445555655445553 789999999999999998874421110157
Q ss_pred eEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 328 IYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 328 iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
+||++++ +++|+.|+++.+.+.++..+
T Consensus 212 ~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 238 (299)
T 1n2s_A 212 LYHLVAG--GTTTWHDYAALVFDEARKAG 238 (299)
T ss_dssp EEECCCB--SCEEHHHHHHHHHHHHHHHT
T ss_pred eEEEeCC--CCCCHHHHHHHHHHHhCCCc
Confidence 9999998 89999999999999988753
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.9e-27 Score=243.19 Aligned_cols=259 Identities=15% Similarity=0.100 Sum_probs=190.5
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCC----ccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccC
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPN----VKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~----V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
+++||+|||||||||||++|+++|++.|.. +.+|+++.|....... ...
T Consensus 11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~---------------------------~~~ 63 (342)
T 2hrz_A 11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA---------------------------GFS 63 (342)
T ss_dssp CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT---------------------------TCC
T ss_pred CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc---------------------------ccC
Confidence 468999999999999999999999998721 1478889987643210 012
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHh-CCccEEEEcCccCCc--cccHHHHHHHhHHHHHHHHHHHHHcc----CceEE
Q 008324 85 EKITFVPGDISSEDLGLKDSNLKEELW-NELDIMVNSAAITKF--DERYDVAFGINTLGVIHLVNFAKKCV----KLKVF 157 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgls~~~~~~~l~-~~vdiViH~AA~v~f--~~~~~~~~~~Nv~gt~~ll~la~~~~----~l~~~ 157 (570)
.++.++.+|+++ .+..+.++ .++|+|||+||.... .+.+...+++|+.||.+++++|++.. ++++|
T Consensus 64 ~~~~~~~~Dl~d-------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~i 136 (342)
T 2hrz_A 64 GAVDARAADLSA-------PGEAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRV 136 (342)
T ss_dssp SEEEEEECCTTS-------TTHHHHHHHTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEE
T ss_pred CceeEEEcCCCC-------HHHHHHHHhcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEE
Confidence 578899999995 34344566 589999999997642 24577789999999999999999873 27899
Q ss_pred EEEecceeecCCC-cccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHH
Q 008324 158 VHVSTAYVAGERT-GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (570)
Q Consensus 158 V~vSTa~v~~~~~-g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
|++||..+++... ..++|+ ++. .+.+.|+.||+
T Consensus 137 v~~SS~~~~~~~~~~~~~E~-----~~~-----------------------------------------~~~~~Y~~sK~ 170 (342)
T 2hrz_A 137 VFTSSIAVFGAPLPYPIPDE-----FHT-----------------------------------------TPLTSYGTQKA 170 (342)
T ss_dssp EEEEEGGGCCSSCCSSBCTT-----CCC-----------------------------------------CCSSHHHHHHH
T ss_pred EEeCchHhhCCCCCCCcCCC-----CCC-----------------------------------------CCcchHHHHHH
Confidence 9999999988642 223332 221 23578999999
Q ss_pred HHHHHHHHh--ccCCcEEEEecCceecCCCCCCCccccC--ccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHH
Q 008324 237 MGEMLMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVED--LKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (570)
Q Consensus 237 ~aE~lv~~~--~~~lp~~IvRPsiV~g~~~ep~~gw~~~--~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ai 312 (570)
.+|.++.++ ..+++.+++|++.|+|.. |+... ......++.....|....++++++...++++++|+|+++
T Consensus 171 ~~e~~~~~~~~~~~~~~~~ir~~~v~g~p-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~ 245 (342)
T 2hrz_A 171 ICELLLSDYSRRGFFDGIGIRLPTICIRP-----GKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFL 245 (342)
T ss_dssp HHHHHHHHHHHTTSCEEEEEEECEETTCC-----SSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCceeEEeeeEEecC-----CCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHH
Confidence 999999887 346899999999999831 22111 112334555566776656667777788999999999999
Q ss_pred HHHHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 313 IVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 313 i~a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
+.++.........+++||++ + .++|+.|+++.+.+.++..
T Consensus 246 ~~~~~~~~~~~~~~~~~ni~-g--~~~s~~e~~~~i~~~~g~~ 285 (342)
T 2hrz_A 246 IHGAMIDVEKVGPRRNLSMP-G--LSATVGEQIEALRKVAGEK 285 (342)
T ss_dssp HHHHHSCHHHHCSCCEEECC-C--EEEEHHHHHHHHHHHHCHH
T ss_pred HHHHhccccccCCccEEEcC-C--CCCCHHHHHHHHHHHcCcc
Confidence 99886321100125799995 4 5799999999999988764
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=9.1e-27 Score=243.86 Aligned_cols=260 Identities=15% Similarity=0.122 Sum_probs=185.8
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|||||||||||++|+++|++.| .+|+++.|+..... .+++. ++ .++.. ....++.++.
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~-~~~~~-~~---------~~~~~-----~~~~~~~~~~ 61 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKG---YEVHGIKRRASSFN-TERVD-HI---------YQDPH-----TCNPKFHLHY 61 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECC-------------------------------------CCEEECC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC---CEEEEEECCCcccc-hHHHH-HH---------hhccc-----cCCCceEEEE
Confidence 4789999999999999999999988 68899999754311 11111 00 00000 0025788999
Q ss_pred ccCCCCCCCCCchhhHHHHhCC--ccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCc---eEEEEEecc
Q 008324 92 GDISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKL---KVFVHVSTA 163 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~--vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l---~~~V~vSTa 163 (570)
+|++ +.+....++++ +|+|||+||..... +.+...+++|+.|+.+++++|++. ++ ++|||+||.
T Consensus 62 ~Dl~-------d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~iv~~SS~ 133 (372)
T 1db3_A 62 GDLS-------DTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL-GLEKKTRFYQASTS 133 (372)
T ss_dssp CCSS-------CHHHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEEG
T ss_pred CCCC-------CHHHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCCCcEEEEeCCh
Confidence 9999 44444566654 79999999976532 456777899999999999999986 66 799999999
Q ss_pred eeecCCCc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHH
Q 008324 164 YVAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (570)
Q Consensus 164 ~v~~~~~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv 242 (570)
.+++...+ .++|. .+. .+.+.|+.||+.+|.++
T Consensus 134 ~v~g~~~~~~~~E~-----~~~-----------------------------------------~~~~~Y~~sK~~~e~~~ 167 (372)
T 1db3_A 134 ELYGLVQEIPQKET-----TPF-----------------------------------------YPRSPYAVAKLYAYWIT 167 (372)
T ss_dssp GGGTTCCSSSBCTT-----SCC-----------------------------------------CCCSHHHHHHHHHHHHH
T ss_pred hhhCCCCCCCCCcc-----CCC-----------------------------------------CCCChHHHHHHHHHHHH
Confidence 99986432 22222 211 23578999999999999
Q ss_pred HHh--ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCc-eeeecCCCeeeeeeehHHHHHHHHHHHHHh
Q 008324 243 QQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNL-RCLVGETKVIMDVIPVDMVVNAMIVAMVAH 319 (570)
Q Consensus 243 ~~~--~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~-~~~~~~~~~~~d~VpVDdva~aii~a~~~~ 319 (570)
+.+ ..+++++++||+.+||+...+ .+.. .....++..+..|.. ...+++++...++|||+|+|++++.++..
T Consensus 168 ~~~~~~~~~~~~~~r~~~~~gp~~~~--~~~~--~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~- 242 (372)
T 1db3_A 168 VNYRESYGMYACNGILFNHESPRRGE--TFVT--RKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQ- 242 (372)
T ss_dssp HHHHHHHCCCEEEEEECCEECTTSCT--TSHH--HHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSS-
T ss_pred HHHHHHhCCCeEEEEECCccCCCCCC--cchh--hHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHHhc-
Confidence 876 348999999999999986532 1111 112334455566653 34568889999999999999999987742
Q ss_pred hCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 320 AKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 320 ~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
+. +++||++++ +++|+.|+++.+.+.++..
T Consensus 243 ---~~-~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 272 (372)
T 1db3_A 243 ---EQ-PEDFVIATG--VQYSVRQFVEMAAAQLGIK 272 (372)
T ss_dssp ---SS-CCCEEECCC--CCEEHHHHHHHHHHTTTEE
T ss_pred ---CC-CceEEEcCC--CceeHHHHHHHHHHHhCCC
Confidence 11 468999998 8899999999999988763
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-26 Score=261.71 Aligned_cols=276 Identities=17% Similarity=0.176 Sum_probs=191.4
Q ss_pred HHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCccc-HHHHHHHHHhhhhhHHHHHhhhccccccccC
Q 008324 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS-AALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~-~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
+...+++|+|||||||||||++|+++|++.| .+|+++.|...... ..+++.. . ..
T Consensus 5 ~~~~~~~~~ilVTGatG~IG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~l~~-------------~--------~~ 60 (699)
T 1z45_A 5 LQSESTSKIVLVTGGAGYIGSHTVVELIENG---YDCVVADNLSNSTYDSVARLEV-------------L--------TK 60 (699)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCTHHHHHHHH-------------H--------HT
T ss_pred cccccCCCEEEEECCCCHHHHHHHHHHHHCc---CEEEEEECCCcchHHHHHHHhh-------------c--------cC
Confidence 4455789999999999999999999999988 67899998764432 1222210 0 02
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 85 EKITFVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
.++.++.+|++ +.+..+.+++ ++|+|||+||..... +.....+++|+.|+.+++++|++. ++++|||
T Consensus 61 ~~v~~v~~Dl~-------d~~~l~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~~iV~ 132 (699)
T 1z45_A 61 HHIPFYEVDLC-------DRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVF 132 (699)
T ss_dssp SCCCEEECCTT-------CHHHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEE
T ss_pred CceEEEEcCCC-------CHHHHHHHHHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEE
Confidence 56788999999 4444556666 799999999987532 345567899999999999999986 7899999
Q ss_pred EecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHH
Q 008324 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (570)
Q Consensus 160 vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE 239 (570)
+||+++++.....-...+++|+.+. .+.+.|+.||+.+|
T Consensus 133 ~SS~~vyg~~~~~~~~~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~E 171 (699)
T 1z45_A 133 SSSATVYGDATRFPNMIPIPEECPL-----------------------------------------GPTNPYGHTKYAIE 171 (699)
T ss_dssp EEEGGGGCCGGGSTTCCSBCTTSCC-----------------------------------------CCCSHHHHHHHHHH
T ss_pred ECcHHHhCCCccccccCCccccCCC-----------------------------------------CCCChHHHHHHHHH
Confidence 9999998764210000112211111 23578999999999
Q ss_pred HHHHHhc----cCCcEEEEecCceecCCCCCCCcccc--CccchHHHHHHHhcC--Cceeeec------CCCeeeeeeeh
Q 008324 240 MLMQQSK----ENLSLVIIRPTVVSGTYKEPFPGWVE--DLKTINTLFVASAQG--NLRCLVG------ETKVIMDVIPV 305 (570)
Q Consensus 240 ~lv~~~~----~~lp~~IvRPsiV~g~~~ep~~gw~~--~~~~~~~~i~~~~~G--~~~~~~~------~~~~~~d~VpV 305 (570)
++++++. .+++++|+||+.|||+....+.|-.. ........+.....| ....+++ +++..+++|||
T Consensus 172 ~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v 251 (699)
T 1z45_A 172 NILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHV 251 (699)
T ss_dssp HHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEH
T ss_pred HHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEeeEEH
Confidence 9998762 58999999999999975322111100 012233344444433 2223444 67789999999
Q ss_pred HHHHHHHHHHHHHhhC---CCCCCceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 306 DMVVNAMIVAMVAHAK---QPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 306 Ddva~aii~a~~~~~~---~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
+|+|++++.++..... ....+++||++++ .++|+.|+++.+.+.++...
T Consensus 252 ~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~--~~~s~~el~~~i~~~~g~~~ 303 (699)
T 1z45_A 252 VDLAKGHIAALQYLEAYNENEGLCREWNLGSG--KGSTVFEVYHAFCKASGIDL 303 (699)
T ss_dssp HHHHHHHHHHHHHHHHSCTTCCEEEEEEESCS--CCEEHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHhhhhccccccCCceEEEECCC--CCCcHHHHHHHHHHHhCCCC
Confidence 9999999998864321 1222579999998 88999999999999988653
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.95 E-value=4.6e-27 Score=265.10 Aligned_cols=270 Identities=19% Similarity=0.238 Sum_probs=197.0
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHh-CCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~-~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
.+.++|+|||||||||||++|+++|++. + ++|++++|+..... ++. ...+
T Consensus 311 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~g---~~V~~~~r~~~~~~---~~~-----------------------~~~~ 361 (660)
T 1z7e_A 311 TARRRTRVLILGVNGFIGNHLTERLLREDH---YEVYGLDIGSDAIS---RFL-----------------------NHPH 361 (660)
T ss_dssp ---CCEEEEEETTTSHHHHHHHHHHHHSSS---EEEEEEESCCTTTG---GGT-----------------------TCTT
T ss_pred hhccCceEEEEcCCcHHHHHHHHHHHhcCC---CEEEEEEcCchhhh---hhc-----------------------cCCc
Confidence 4567899999999999999999999997 6 68899999764321 000 0257
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecc
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f---~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa 163 (570)
+.++.+|++++ .+..+.+++++|+|||+||.... .++....+++|+.|+.+++++|++. + ++|||+||.
T Consensus 362 v~~v~~Dl~d~------~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~-~r~V~~SS~ 433 (660)
T 1z7e_A 362 FHFVEGDISIH------SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTS 433 (660)
T ss_dssp EEEEECCTTTC------HHHHHHHHHHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCG
T ss_pred eEEEECCCCCc------HHHHHHhhcCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHh-C-CEEEEEecH
Confidence 88999999953 23344567789999999998653 3556778999999999999999987 5 899999999
Q ss_pred eeecCCCc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHH
Q 008324 164 YVAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (570)
Q Consensus 164 ~v~~~~~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv 242 (570)
++++...+ .++|. ++... ......+.+.|+.||..+|.++
T Consensus 434 ~vyg~~~~~~~~E~-----~~~~~----------------------------------~~p~~~p~~~Y~~sK~~~E~~~ 474 (660)
T 1z7e_A 434 EVYGMCSDKYFDED-----HSNLI----------------------------------VGPVNKPRWIYSVSKQLLDRVI 474 (660)
T ss_dssp GGGBTCCSSSBCTT-----TCCEE----------------------------------ECCTTCTTHHHHHHHHHHHHHH
T ss_pred HHcCCCCCcccCCC-----ccccc----------------------------------cCcccCCCCCcHHHHHHHHHHH
Confidence 99986432 23332 11100 0000123468999999999999
Q ss_pred HHh--ccCCcEEEEecCceecCCCCCCCccccC-ccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHh
Q 008324 243 QQS--KENLSLVIIRPTVVSGTYKEPFPGWVED-LKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAH 319 (570)
Q Consensus 243 ~~~--~~~lp~~IvRPsiV~g~~~ep~~gw~~~-~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~ 319 (570)
+.+ ..+++++++||+.|||+...+..++.-+ ......++..+..|....++++++...++++|+|+|++++.++...
T Consensus 475 ~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~ 554 (660)
T 1z7e_A 475 WAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENA 554 (660)
T ss_dssp HHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCG
T ss_pred HHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCc
Confidence 876 3489999999999999876432111000 1123445566667776677788889999999999999999988633
Q ss_pred hCCCCCCceEEecCCCCC-cccHHHHHHHHhhhcccCC
Q 008324 320 AKQPSDANIYHVGSSLRN-PVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 320 ~~~~~~~~iyni~s~~~~-pit~~~l~~~i~~~~~~~p 356 (570)
.. ...+++||++++ + ++|+.|+++.+.+.++..+
T Consensus 555 ~~-~~~g~~~ni~~~--~~~~s~~el~~~i~~~~g~~~ 589 (660)
T 1z7e_A 555 GN-RCDGEIINIGNP--ENEASIEELGEMLLASFEKHP 589 (660)
T ss_dssp GG-TTTTEEEEECCG--GGEEEHHHHHHHHHHHHHHCT
T ss_pred cc-cCCCeEEEECCC--CCCcCHHHHHHHHHHHhcCCC
Confidence 21 112689999987 5 7999999999999988654
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-26 Score=234.08 Aligned_cols=225 Identities=18% Similarity=0.200 Sum_probs=174.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
-..++|||||||||||++|+++|++.| .+|+++.|+
T Consensus 10 ~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~----------------------------------------- 45 (292)
T 1vl0_A 10 HHHMKILITGANGQLGREIQKQLKGKN---VEVIPTDVQ----------------------------------------- 45 (292)
T ss_dssp --CEEEEEESTTSHHHHHHHHHHTTSS---EEEEEECTT-----------------------------------------
T ss_pred cccceEEEECCCChHHHHHHHHHHhCC---CeEEeccCc-----------------------------------------
Confidence 346899999999999999999999988 678888773
Q ss_pred EeccCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecce
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~ 164 (570)
.+|++ +.+....+++ ++|+|||+||....+ +.++..+++|+.|+.+++++|++. ++ +|||+||.+
T Consensus 46 -~~Dl~-------d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~-~iv~~SS~~ 115 (292)
T 1vl0_A 46 -DLDIT-------NVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV-GA-EIVQISTDY 115 (292)
T ss_dssp -TCCTT-------CHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGG
T ss_pred -cCCCC-------CHHHHHHHHHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEechHH
Confidence 26777 4444556666 799999999987642 567788999999999999999997 66 999999999
Q ss_pred eecCCCc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHH
Q 008324 165 VAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (570)
Q Consensus 165 v~~~~~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~ 243 (570)
+++...+ .++|. ++. .+.+.|+.||..+|.+++
T Consensus 116 v~~~~~~~~~~E~-----~~~-----------------------------------------~~~~~Y~~sK~~~E~~~~ 149 (292)
T 1vl0_A 116 VFDGEAKEPITEF-----DEV-----------------------------------------NPQSAYGKTKLEGENFVK 149 (292)
T ss_dssp GSCSCCSSCBCTT-----SCC-----------------------------------------CCCSHHHHHHHHHHHHHH
T ss_pred eECCCCCCCCCCC-----CCC-----------------------------------------CCccHHHHHHHHHHHHHH
Confidence 9886431 22232 211 235789999999999999
Q ss_pred HhccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCC
Q 008324 244 QSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQP 323 (570)
Q Consensus 244 ~~~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~ 323 (570)
.+. .+++++||+.|||+ .. + ....++.....|....+.+ +...++++++|+|++++.++...
T Consensus 150 ~~~--~~~~~lR~~~v~G~-~~---~------~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~---- 211 (292)
T 1vl0_A 150 ALN--PKYYIVRTAWLYGD-GN---N------FVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK---- 211 (292)
T ss_dssp HHC--SSEEEEEECSEESS-SS---C------HHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT----
T ss_pred hhC--CCeEEEeeeeeeCC-Cc---C------hHHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcC----
Confidence 864 47999999999997 31 1 1223344444555444444 47889999999999999988642
Q ss_pred CCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 324 SDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 324 ~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
.+++||++++ .++|+.|+++.+.+.++..
T Consensus 212 -~~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 240 (292)
T 1vl0_A 212 -NYGTFHCTCK--GICSWYDFAVEIFRLTGID 240 (292)
T ss_dssp -CCEEEECCCB--SCEEHHHHHHHHHHHHCCC
T ss_pred -CCcEEEecCC--CCccHHHHHHHHHHHhCCC
Confidence 2689999998 8899999999999998864
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-26 Score=243.56 Aligned_cols=259 Identities=15% Similarity=0.144 Sum_probs=187.7
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCC-ceEEEe
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE-KITFVP 91 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~-kv~~v~ 91 (570)
|+|||||||||||++|+++|++.| .+|+++.|+...... +++. .+ ...+.. ... ++.++.
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g---~~V~~~~r~~~~~~~-~~~~-~~-----~~~~~~---------~~~~~~~~~~ 89 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKG---YEVHGLIRRSSNFNT-QRIN-HI-----YIDPHN---------VNKALMKLHY 89 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSSCCC-TTTT-TT-----C-----------------CCEEEEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHCC---CEEEEEecCCccccc-hhhh-hh-----hhcccc---------ccccceEEEE
Confidence 589999999999999999999988 688999997643110 0000 00 000000 012 788999
Q ss_pred ccCCCCCCCCCchhhHHHHhCC--ccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCce-----EEEEEe
Q 008324 92 GDISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLK-----VFVHVS 161 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~--vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~-----~~V~vS 161 (570)
+|++ +.+....++++ +|+|||+||..... +.+...+++|+.|+.+++++|.+. +++ +|||+|
T Consensus 90 ~Dl~-------d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~~~~~~v~~S 161 (381)
T 1n7h_A 90 ADLT-------DASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH-TIDSGRTVKYYQAG 161 (381)
T ss_dssp CCTT-------CHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHH-HHHHCCCCEEEEEE
T ss_pred CCCC-------CHHHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCccCCccEEEEeC
Confidence 9999 44444566664 69999999987643 456778999999999999999986 565 999999
Q ss_pred cceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHH
Q 008324 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (570)
Q Consensus 162 Ta~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~l 241 (570)
|.++||...+.++|. .+. .+.+.|+.||+.+|.+
T Consensus 162 S~~vyg~~~~~~~E~-----~~~-----------------------------------------~~~~~Y~~sK~~~E~~ 195 (381)
T 1n7h_A 162 SSEMFGSTPPPQSET-----TPF-----------------------------------------HPRSPYAASKCAAHWY 195 (381)
T ss_dssp EGGGGTTSCSSBCTT-----SCC-----------------------------------------CCCSHHHHHHHHHHHH
T ss_pred cHHHhCCCCCCCCCC-----CCC-----------------------------------------CCCCchHHHHHHHHHH
Confidence 999998754323332 211 3357899999999999
Q ss_pred HHHh--ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCc-eeeecCCCeeeeeeehHHHHHHHHHHHHH
Q 008324 242 MQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNL-RCLVGETKVIMDVIPVDMVVNAMIVAMVA 318 (570)
Q Consensus 242 v~~~--~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~-~~~~~~~~~~~d~VpVDdva~aii~a~~~ 318 (570)
+..+ ..+++++++||+.+||+...+ .+.. .....++..+..|.. ....++++...++++|+|+|++++.++..
T Consensus 196 ~~~~~~~~~~~~~~~r~~~~~gp~~~~--~~~~--~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~ 271 (381)
T 1n7h_A 196 TVNYREAYGLFACNGILFNHESPRRGE--NFVT--RKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQ 271 (381)
T ss_dssp HHHHHHHHCCEEEEEEECCEECTTSCT--TSHH--HHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTS
T ss_pred HHHHHHHhCCcEEEEEeCceeCCCCCC--cchh--HHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhC
Confidence 9876 337999999999999976421 1111 112233444455643 34568888999999999999999988852
Q ss_pred hhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 319 HAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 319 ~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
. . +++||++++ .++|+.|+++.+.+.++..
T Consensus 272 ~---~--~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 301 (381)
T 1n7h_A 272 E---K--PDDYVVATE--EGHTVEEFLDVSFGYLGLN 301 (381)
T ss_dssp S---S--CCEEEECCS--CEEEHHHHHHHHHHHTTCC
T ss_pred C---C--CCeEEeeCC--CCCcHHHHHHHHHHHcCCC
Confidence 1 1 479999998 8999999999999998763
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.95 E-value=8e-27 Score=227.33 Aligned_cols=222 Identities=17% Similarity=0.132 Sum_probs=161.5
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.|+|+|||||||||++|+++|++.| .+|+++.|+...... ...++.++.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~----------------------------~~~~~~~~~ 52 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRG---FEVTAVVRHPEKIKI----------------------------ENEHLKVKK 52 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTT---CEEEEECSCGGGCCC----------------------------CCTTEEEEC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCC---CEEEEEEcCcccchh----------------------------ccCceEEEE
Confidence 3799999999999999999999998 789999997543210 126789999
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCCc
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~g 171 (570)
+|++ +.+....+++++|+|||+|+....+ ...+++|+.|+.+++++|++. ++++|||+||..++....+
T Consensus 53 ~Dl~-------d~~~~~~~~~~~d~vi~~a~~~~~~---~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~~~~ 121 (227)
T 3dhn_A 53 ADVS-------SLDEVCEVCKGADAVISAFNPGWNN---PDIYDETIKVYLTIIDGVKKA-GVNRFLMVGGAGSLFIAPG 121 (227)
T ss_dssp CCTT-------CHHHHHHHHTTCSEEEECCCC---------CCSHHHHHHHHHHHHHHHT-TCSEEEEECCSTTSEEETT
T ss_pred ecCC-------CHHHHHHHhcCCCEEEEeCcCCCCC---hhHHHHHHHHHHHHHHHHHHh-CCCEEEEeCChhhccCCCC
Confidence 9999 5555668889999999999875221 226788999999999999997 7899999999876654333
Q ss_pred ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--ccCC
Q 008324 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KENL 249 (570)
Q Consensus 172 ~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~~~l 249 (570)
...|. .+ ..+.+.|+.+|..+|.+++.+ ..++
T Consensus 122 ~~~~~-----~~-----------------------------------------~~p~~~Y~~sK~~~e~~~~~~~~~~~~ 155 (227)
T 3dhn_A 122 LRLMD-----SG-----------------------------------------EVPENILPGVKALGEFYLNFLMKEKEI 155 (227)
T ss_dssp EEGGG-----TT-----------------------------------------CSCGGGHHHHHHHHHHHHHTGGGCCSS
T ss_pred Ccccc-----CC-----------------------------------------cchHHHHHHHHHHHHHHHHHHhhccCc
Confidence 22221 00 023478999999999888776 4589
Q ss_pred cEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceE
Q 008324 250 SLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIY 329 (570)
Q Consensus 250 p~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iy 329 (570)
+++++||+.|||+...+ +... .+ +......+++ .++|+++|+|++++.++... ...+++|
T Consensus 156 ~~~ilrp~~v~g~~~~~--~~~~-----------~~-~~~~~~~~~~---~~~i~~~Dva~ai~~~l~~~---~~~g~~~ 215 (227)
T 3dhn_A 156 DWVFFSPAADMRPGVRT--GRYR-----------LG-KDDMIVDIVG---NSHISVEDYAAAMIDELEHP---KHHQERF 215 (227)
T ss_dssp EEEEEECCSEEESCCCC--CCCE-----------EE-SSBCCCCTTS---CCEEEHHHHHHHHHHHHHSC---CCCSEEE
T ss_pred cEEEEeCCcccCCCccc--ccee-----------ec-CCCcccCCCC---CcEEeHHHHHHHHHHHHhCc---cccCcEE
Confidence 99999999999986532 1110 01 1111222222 79999999999999998732 2237899
Q ss_pred EecCCCCCcccHHH
Q 008324 330 HVGSSLRNPVTLVS 343 (570)
Q Consensus 330 ni~s~~~~pit~~~ 343 (570)
|++++ +|.+|++
T Consensus 216 ~~~~~--~~~~~~~ 227 (227)
T 3dhn_A 216 TIGYL--EHHHHHH 227 (227)
T ss_dssp EEECC--SCCC---
T ss_pred EEEee--hhcccCC
Confidence 99999 7888753
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.1e-26 Score=235.91 Aligned_cols=262 Identities=15% Similarity=0.151 Sum_probs=171.2
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+|||||||||||++|+++|++.| ++|++++|+.........+. + .+. ...++.++
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~----~----------~~~-----~~~~~~~~ 61 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERG---YTVRATVRDPTNVKKVKHLL----D----------LPK-----AETHLTLW 61 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCTTCHHHHHHHH----T----------STT-----HHHHEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCC---CEEEEEECCcchhHHHHHHH----h----------ccc-----CCCeEEEE
Confidence 57999999999999999999999998 67888899764321111111 0 000 01357889
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc--ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEeccee-ec
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD--ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV-AG 167 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~--~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v-~~ 167 (570)
.+|++++ +..+.+++++|+|||+||...+. ++.+..+++|+.||.+++++|++..++++|||+||+.+ ++
T Consensus 62 ~~Dl~d~-------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~ 134 (337)
T 2c29_D 62 KADLADE-------GSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNI 134 (337)
T ss_dssp ECCTTST-------TTTHHHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSC
T ss_pred EcCCCCH-------HHHHHHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhccc
Confidence 9999953 33457778999999999976543 22345789999999999999998734899999999874 43
Q ss_pred CCC--cccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008324 168 ERT--GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (570)
Q Consensus 168 ~~~--g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (570)
... ..++|. .+.+.+.... ...+.+.|+.||.++|.++.++
T Consensus 135 ~~~~~~~~~E~-----~~~~~~~~~~--------------------------------~~~~~~~Y~~sK~~~E~~~~~~ 177 (337)
T 2c29_D 135 QEHQLPVYDES-----CWSDMEFCRA--------------------------------KKMTAWMYFVSKTLAEQAAWKY 177 (337)
T ss_dssp SSSCCSEECTT-----CCCCHHHHHH--------------------------------HCCTTHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcccCcc-----cCCchhhhcc--------------------------------cCCccchHHHHHHHHHHHHHHH
Confidence 311 123333 2222111000 0012357999999999999876
Q ss_pred --ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCC
Q 008324 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQP 323 (570)
Q Consensus 246 --~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~ 323 (570)
..+++++++||+.|||+...+. +............|... ..+.. ....+++|+|+|++++.++... ..
T Consensus 178 ~~~~gi~~~~lrp~~v~Gp~~~~~------~~~~~~~~~~~~~g~~~-~~~~~-~~~~~i~v~Dva~a~~~~~~~~--~~ 247 (337)
T 2c29_D 178 AKENNIDFITIIPTLVVGPFIMSS------MPPSLITALSPITGNEA-HYSII-RQGQFVHLDDLCNAHIYLFENP--KA 247 (337)
T ss_dssp HHHHTCCEEEEEECEEESCCSCSS------CCHHHHHHTHHHHTCGG-GHHHH-TEEEEEEHHHHHHHHHHHHHCT--TC
T ss_pred HHHcCCcEEEEeCCceECCCCCCC------CCchHHHHHHHHcCCCc-ccccc-CCCCEEEHHHHHHHHHHHhcCc--cc
Confidence 3589999999999999875321 11100001011222211 11111 1345999999999999988521 11
Q ss_pred CCCceEEecCCCCCcccHHHHHHHHhhhcc
Q 008324 324 SDANIYHVGSSLRNPVTLVSILDYGFVYFT 353 (570)
Q Consensus 324 ~~~~iyni~s~~~~pit~~~l~~~i~~~~~ 353 (570)
..+|++++ ..+|+.|+++.+.+.++
T Consensus 248 --~~~~~~~~---~~~s~~e~~~~i~~~~~ 272 (337)
T 2c29_D 248 --EGRYICSS---HDCIILDLAKMLREKYP 272 (337)
T ss_dssp --CEEEEECC---EEEEHHHHHHHHHHHCT
T ss_pred --CceEEEeC---CCCCHHHHHHHHHHHCC
Confidence 34787765 46899999999998764
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.95 E-value=3.6e-27 Score=243.81 Aligned_cols=261 Identities=18% Similarity=0.205 Sum_probs=169.2
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|||||||||||++|+++|++.| ++|++++|+.........+. + +. ...++.++.
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G---~~V~~~~r~~~~~~~~~~~~-~---------~~----------~~~~~~~~~ 65 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKG---YAVNTTVRDPDNQKKVSHLL-E---------LQ----------ELGDLKIFR 65 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTT---CEEEEEESCTTCTTTTHHHH-H---------HG----------GGSCEEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCC---CEEEEEEcCcchhhhHHHHH-h---------cC----------CCCcEEEEe
Confidence 7899999999999999999999998 67888899764322111111 0 00 025688999
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc--ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEeccee-ecC
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD--ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV-AGE 168 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~--~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v-~~~ 168 (570)
+|++++ +....+++++|+|||+||...+. ++.+..+++|+.||.+++++|++..++++|||+||+.+ ++.
T Consensus 66 ~Dl~d~-------~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~ 138 (338)
T 2rh8_A 66 ADLTDE-------LSFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTIN 138 (338)
T ss_dssp CCTTTS-------SSSHHHHTTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHH
T ss_pred cCCCCh-------HHHHHHHcCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecC
Confidence 999953 33346778999999999976543 22334789999999999999998634899999999863 332
Q ss_pred C-Cc---ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc-hHHHHHHHHHHHHH
Q 008324 169 R-TG---LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN-TYVFTKTMGEMLMQ 243 (570)
Q Consensus 169 ~-~g---~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n-~Y~~sK~~aE~lv~ 243 (570)
. .+ .++|.. +.+.+... + ..+++ .|+.||.++|.++.
T Consensus 139 ~~~~~~~~~~E~~-----~~~~~~~~------------------------------~---~~~~~~~Y~~sK~~~E~~~~ 180 (338)
T 2rh8_A 139 QLDGTGLVVDEKN-----WTDIEFLT------------------------------S---AKPPTWGYPASKTLAEKAAW 180 (338)
T ss_dssp HHTCSCCCCCTTT-----TTCC----------------------------------------CCCCCCTTSCCHHHHHHH
T ss_pred CcCCCCcccChhh-----ccchhhcc------------------------------c---cCCccchHHHHHHHHHHHHH
Confidence 1 11 233332 11110000 0 01122 59999999999998
Q ss_pred Hh--ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecC------CCeeeeeeehHHHHHHHHHH
Q 008324 244 QS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGE------TKVIMDVIPVDMVVNAMIVA 315 (570)
Q Consensus 244 ~~--~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~------~~~~~d~VpVDdva~aii~a 315 (570)
++ ..+++++++||+.|||+...+. .......+.....|.... .++ +....++++|+|+|++++.+
T Consensus 181 ~~~~~~gi~~~~lrp~~v~Gp~~~~~------~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 253 (338)
T 2rh8_A 181 KFAEENNIDLITVIPTLMAGSSLTSD------VPSSIGLAMSLITGNEFL-INGMKGMQMLSGSVSIAHVEDVCRAHIFV 253 (338)
T ss_dssp HHHHHHTCCEEEEEECEEESCCSSSS------CCHHHHHHHHHHHTCHHH-HHHHHHHHHHHSSEEEEEHHHHHHHHHHH
T ss_pred HHHHHcCCcEEEEeCCceECCCCCCC------CCchHHHHHHHHcCCccc-cccccccccccCcccEEEHHHHHHHHHHH
Confidence 76 2489999999999999876431 111111111112232111 110 11235899999999999998
Q ss_pred HHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhccc
Q 008324 316 MVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 316 ~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~ 354 (570)
+... . ...+|+++++ .+|+.|+++.+.+.++.
T Consensus 254 ~~~~--~--~~~~~~~~~~---~~s~~e~~~~l~~~~~~ 285 (338)
T 2rh8_A 254 AEKE--S--ASGRYICCAA---NTSVPELAKFLSKRYPQ 285 (338)
T ss_dssp HHCT--T--CCEEEEECSE---EECHHHHHHHHHHHCTT
T ss_pred HcCC--C--cCCcEEEecC---CCCHHHHHHHHHHhCCC
Confidence 8521 1 1357988763 58999999999887653
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.8e-26 Score=237.45 Aligned_cols=253 Identities=15% Similarity=0.125 Sum_probs=182.9
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCC--CccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQP--NVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~--~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
||+|||||||||||++|+++|++.|+ .+.+|++++|+..... + ...++.+
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~----~------------------------~~~~~~~ 52 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW----H------------------------EDNPINY 52 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC----C------------------------CSSCCEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc----c------------------------ccCceEE
Confidence 57999999999999999999999772 2357899999765431 0 0257889
Q ss_pred EeccCCCCCCCCCchhhHHHHhCC---ccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHc-cCceEEE-------
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNE---LDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC-VKLKVFV------- 158 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~---vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~-~~l~~~V------- 158 (570)
+.+|++ +.+....++++ +|+|||+||... .+....+++|+.|+.+++++|++. +++++||
T Consensus 53 ~~~Dl~-------d~~~~~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i 123 (364)
T 2v6g_A 53 VQCDIS-------DPDDSQAKLSPLTDVTHVFYVTWANR--STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKH 123 (364)
T ss_dssp EECCTT-------SHHHHHHHHTTCTTCCEEEECCCCCC--SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHH
T ss_pred EEeecC-------CHHHHHHHHhcCCCCCEEEECCCCCc--chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceE
Confidence 999999 44445577777 999999999763 456778999999999999999985 3688998
Q ss_pred EEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHH
Q 008324 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (570)
Q Consensus 159 ~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~a 238 (570)
|+||..++|.... .+.++.|+.+.. +.++.| ..+
T Consensus 124 ~~Ss~~vyg~~~~--~~~~~~E~~~~~----------------------------------------~~~~~y----~~~ 157 (364)
T 2v6g_A 124 YMGPFESYGKIES--HDPPYTEDLPRL----------------------------------------KYMNFY----YDL 157 (364)
T ss_dssp HHCCGGGTTTSCC--CCSSBCTTSCCC----------------------------------------SSCCHH----HHH
T ss_pred EEechhhcccccc--CCCCCCccccCC----------------------------------------ccchhh----HHH
Confidence 7999998886420 111222222111 225677 358
Q ss_pred HHHHHHhc--cC-CcEEEEecCceecCCCCCCCccccCccchHHHHHHH--hcCCceeeecCC---CeeeeeeehHHHHH
Q 008324 239 EMLMQQSK--EN-LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVAS--AQGNLRCLVGET---KVIMDVIPVDMVVN 310 (570)
Q Consensus 239 E~lv~~~~--~~-lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~--~~G~~~~~~~~~---~~~~d~VpVDdva~ 310 (570)
|+++.++. .+ ++++|+||+.|||+...+... ......++... ..|....+++++ ....++++|||+|+
T Consensus 158 E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~ 233 (364)
T 2v6g_A 158 EDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMN----LVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAE 233 (364)
T ss_dssp HHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSC----HHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHH
T ss_pred HHHHHHHhhcCCCceEEEECCCceeCCCCCcccc----hHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHHH
Confidence 88888763 34 999999999999987642211 00111122333 256555566776 34588999999999
Q ss_pred HHHHHHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 311 AMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
+++.++..... .+++||++++ .++|+.|+++.+.+.++..+
T Consensus 234 a~~~~~~~~~~---~g~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 274 (364)
T 2v6g_A 234 HHIWAAVDPYA---KNEAFNVSNG--DVFKWKHFWKVLAEQFGVEC 274 (364)
T ss_dssp HHHHHHHCGGG---TTEEEEECCS--CCBCHHHHHHHHHHHHTCCB
T ss_pred HHHHHHhCCCC---CCceEEecCC--CcCCHHHHHHHHHHHhCCCC
Confidence 99998863221 2679999998 78999999999999998654
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-25 Score=246.72 Aligned_cols=236 Identities=15% Similarity=0.126 Sum_probs=170.3
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|||||||||||++|++.|++.| ++|++++|+.... + .+.
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G---~~V~~l~R~~~~~--------------------------------~---~v~ 188 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGG---HEVIQLVRKEPKP--------------------------------G---KRF 188 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESSSCCT--------------------------------T---CEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCCCCc--------------------------------c---cee
Confidence 7899999999999999999999998 6889999976432 1 256
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc----cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeec
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF----DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f----~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~ 167 (570)
+|+.+. . ...++++|+|||+||.... .+.....+++|+.|+.++++++.+..++++|||+||+++||
T Consensus 189 ~d~~~~-------~--~~~l~~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg 259 (516)
T 3oh8_A 189 WDPLNP-------A--SDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYG 259 (516)
T ss_dssp CCTTSC-------C--TTTTTTCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGC
T ss_pred ecccch-------h--HHhcCCCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEec
Confidence 777632 1 2445789999999998632 24567788999999999999944445899999999999998
Q ss_pred CCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-c
Q 008324 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-K 246 (570)
Q Consensus 168 ~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~-~ 246 (570)
...+ ..++.|+.+ ...+.|+.+|..+|.++... .
T Consensus 260 ~~~~---~~~~~E~~~------------------------------------------~~~~~y~~~~~~~E~~~~~~~~ 294 (516)
T 3oh8_A 260 HDRG---DEILTEESE------------------------------------------SGDDFLAEVCRDWEHATAPASD 294 (516)
T ss_dssp SEEE---EEEECTTSC------------------------------------------CCSSHHHHHHHHHHHTTHHHHH
T ss_pred CCCC---CCccCCCCC------------------------------------------CCcChHHHHHHHHHHHHHHHHh
Confidence 3111 122222111 13467999999999887655 5
Q ss_pred cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCC
Q 008324 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~ 326 (570)
.+++++|+||+.|||+.. + ....++..+..|.. ..+++++...++|+++|+|++++.++.... ..
T Consensus 295 ~gi~~~ilRp~~v~Gp~~----~------~~~~~~~~~~~g~~-~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~----~~ 359 (516)
T 3oh8_A 295 AGKRVAFIRTGVALSGRG----G------MLPLLKTLFSTGLG-GKFGDGTSWFSWIAIDDLTDIYYRAIVDAQ----IS 359 (516)
T ss_dssp TTCEEEEEEECEEEBTTB----S------HHHHHHHTTC---C-CCCTTSCCEECEEEHHHHHHHHHHHHHCTT----CC
T ss_pred CCCCEEEEEeeEEECCCC----C------hHHHHHHHHHhCCC-cccCCCCceEceEeHHHHHHHHHHHHhCcc----cC
Confidence 689999999999999752 1 11222222333333 456888999999999999999999986321 24
Q ss_pred ceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 327 NIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 327 ~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
.+||++++ +++|+.|+++.+.+.+|..+
T Consensus 360 g~~ni~~~--~~~s~~el~~~i~~~~g~~~ 387 (516)
T 3oh8_A 360 GPINAVAP--NPVSNADMTKILATSMHRPA 387 (516)
T ss_dssp EEEEESCS--CCEEHHHHHHHTTC------
T ss_pred CcEEEECC--CCCCHHHHHHHHHHHhCCCC
Confidence 58999998 89999999999999888643
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.94 E-value=1.7e-25 Score=225.69 Aligned_cols=218 Identities=13% Similarity=0.209 Sum_probs=168.3
Q ss_pred CEEEEECCcchhHHHHHHHHHHh--CCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 13 KTILVSGVTGFVAKVFIEKILRV--QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~--~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
|+|||||||||||++++++|++. | ++|+++.|+..... .+. ..++.++
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g---~~V~~~~r~~~~~~---~l~------------------------~~~~~~~ 50 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPA---SQIIAIVRNVEKAS---TLA------------------------DQGVEVR 50 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCG---GGEEEEESCTTTTH---HHH------------------------HTTCEEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCC---CeEEEEEcCHHHHh---HHh------------------------hcCCeEE
Confidence 57999999999999999999998 6 67899999764321 111 1467899
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCC
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~ 170 (570)
.+|++ +.+....+++++|+|||+||.. .. + ++|+.|+.+++++|++. ++++|||+||.+++.
T Consensus 51 ~~D~~-------d~~~l~~~~~~~d~vi~~a~~~-~~---~---~~n~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~--- 112 (287)
T 2jl1_A 51 HGDYN-------QPESLQKAFAGVSKLLFISGPH-YD---N---TLLIVQHANVVKAARDA-GVKHIAYTGYAFAEE--- 112 (287)
T ss_dssp ECCTT-------CHHHHHHHTTTCSEEEECCCCC-SC---H---HHHHHHHHHHHHHHHHT-TCSEEEEEEETTGGG---
T ss_pred EeccC-------CHHHHHHHHhcCCEEEEcCCCC-cC---c---hHHHHHHHHHHHHHHHc-CCCEEEEECCCCCCC---
Confidence 99999 4555668888999999999963 21 1 67999999999999986 889999999986531
Q ss_pred cccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccCCc
Q 008324 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLS 250 (570)
Q Consensus 171 g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp 250 (570)
.+..|+.+|..+|+++++ .+++
T Consensus 113 --------------------------------------------------------~~~~y~~~K~~~E~~~~~--~~~~ 134 (287)
T 2jl1_A 113 --------------------------------------------------------SIIPLAHVHLATEYAIRT--TNIP 134 (287)
T ss_dssp --------------------------------------------------------CCSTHHHHHHHHHHHHHH--TTCC
T ss_pred --------------------------------------------------------CCCchHHHHHHHHHHHHH--cCCC
Confidence 023699999999999986 6899
Q ss_pred EEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEE
Q 008324 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (570)
Q Consensus 251 ~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn 330 (570)
++++||+.++|+.. +.++ .. ....|.. ....++...++++++|+|++++.++... . ..+++||
T Consensus 135 ~~ilrp~~~~~~~~---~~~~------~~---~~~~~~~--~~~~~~~~~~~i~~~Dva~~~~~~~~~~-~--~~g~~~~ 197 (287)
T 2jl1_A 135 YTFLRNALYTDFFV---NEGL------RA---STESGAI--VTNAGSGIVNSVTRNELALAAATVLTEE-G--HENKTYN 197 (287)
T ss_dssp EEEEEECCBHHHHS---SGGG------HH---HHHHTEE--EESCTTCCBCCBCHHHHHHHHHHHHTSS-S--CTTEEEE
T ss_pred eEEEECCEeccccc---hhhH------HH---HhhCCce--eccCCCCccCccCHHHHHHHHHHHhcCC-C--CCCcEEE
Confidence 99999999887531 1111 11 1123432 2455667889999999999999888521 1 2368999
Q ss_pred ecCCCCCcccHHHHHHHHhhhcccC
Q 008324 331 VGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 331 i~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
++++ .++|+.|+++.+.+.+|..
T Consensus 198 i~~~--~~~s~~e~~~~i~~~~g~~ 220 (287)
T 2jl1_A 198 LVSN--QPWTFDELAQILSEVSGKK 220 (287)
T ss_dssp ECCS--SCBCHHHHHHHHHHHHSSC
T ss_pred ecCC--CcCCHHHHHHHHHHHHCCc
Confidence 9998 7899999999999998864
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3.6e-26 Score=239.63 Aligned_cols=215 Identities=18% Similarity=0.177 Sum_probs=168.8
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|++.|. .+| +.+
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~--~~v-----------------------------------------------~~~ 31 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTD--HHI-----------------------------------------------FEV 31 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCC--CEE-----------------------------------------------EEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC--CEE-----------------------------------------------EEE
Confidence 5899999999999999999999873 133 344
Q ss_pred cC-CCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCce-EEEEEecceeecCCC
Q 008324 93 DI-SSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLK-VFVHVSTAYVAGERT 170 (570)
Q Consensus 93 Dl-~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~-~~V~vSTa~v~~~~~ 170 (570)
|. + +.+..+.+++++|+|||+||..... .....+++|+.|+.+++++|++. +++ +|||+||+++++
T Consensus 32 d~~~-------d~~~l~~~~~~~d~Vih~a~~~~~~-~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~Ss~~~~~--- 99 (369)
T 3st7_A 32 HRQT-------KEEELESALLKADFIVHLAGVNRPE-HDKEFSLGNVSYLDHVLDILTRN-TKKPAILLSSSIQATQ--- 99 (369)
T ss_dssp CTTC-------CHHHHHHHHHHCSEEEECCCSBCTT-CSTTCSSSCCBHHHHHHHHHTTC-SSCCEEEEEEEGGGGS---
T ss_pred CCCC-------CHHHHHHHhccCCEEEECCcCCCCC-CHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEeCchhhcC---
Confidence 54 3 4444567778899999999987643 34556789999999999999987 666 999999998765
Q ss_pred cccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--ccC
Q 008324 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KEN 248 (570)
Q Consensus 171 g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~~~ 248 (570)
.+.|+.||..+|++++++ ..+
T Consensus 100 ---------------------------------------------------------~~~Y~~sK~~~E~~~~~~~~~~g 122 (369)
T 3st7_A 100 ---------------------------------------------------------DNPYGESKLQGEQLLREYAEEYG 122 (369)
T ss_dssp ---------------------------------------------------------CSHHHHHHHHHHHHHHHHHHHHC
T ss_pred ---------------------------------------------------------CCCchHHHHHHHHHHHHHHHHhC
Confidence 257999999999999886 357
Q ss_pred CcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCce
Q 008324 249 LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANI 328 (570)
Q Consensus 249 lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~i 328 (570)
++++|+||+.|||++..|.. .+....++..+..|.... ..+++...+++|+||+|++++.++...... .+++
T Consensus 123 ~~~~i~R~~~v~G~~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~--~~~~ 194 (369)
T 3st7_A 123 NTVYIYRWPNLFGKWCKPNY-----NSVIATFCYKIARNEEIQ-VNDRNVELTLNYVDDIVAEIKRAIEGTPTI--ENGV 194 (369)
T ss_dssp CCEEEEEECEEECTTCCTTS-----SCHHHHHHHHHHTTCCCC-CSCTTCEEEEEEHHHHHHHHHHHHHTCCCE--ETTE
T ss_pred CCEEEEECCceeCCCCCCCc-----chHHHHHHHHHHcCCCeE-ecCCCeEEEEEEHHHHHHHHHHHHhCCccc--CCce
Confidence 99999999999999875521 122334444555665433 357889999999999999999998732211 1579
Q ss_pred EEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 329 YHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 329 yni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
||++++ +++|+.|+++.+.+.++..
T Consensus 195 ~~i~~~--~~~s~~e~~~~~~~~~g~~ 219 (369)
T 3st7_A 195 PTVPNV--FKVTLGEIVDLLYKFKQSR 219 (369)
T ss_dssp ECCSCC--EEEEHHHHHHHHHHHHHHH
T ss_pred EEeCCC--CceeHHHHHHHHHHHhCCC
Confidence 999998 8999999999999988865
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.94 E-value=2e-25 Score=219.11 Aligned_cols=218 Identities=16% Similarity=0.230 Sum_probs=164.0
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
..++||+|+|||||||||++++++|++.| .+|+++.|+.... +.+. ..++
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G---~~V~~~~R~~~~~---~~~~------------------------~~~~ 66 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNKG---HEPVAMVRNEEQG---PELR------------------------ERGA 66 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSGGGH---HHHH------------------------HTTC
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhCC---CeEEEEECChHHH---HHHH------------------------hCCC
Confidence 44789999999999999999999999998 6889999976432 1111 1467
Q ss_pred -EEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceee
Q 008324 88 -TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 88 -~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~ 166 (570)
.++.+|++ . +. ...++++|+|||+||.... +.++..+++|+.|+.+++++|++. ++++||++||....
T Consensus 67 ~~~~~~Dl~-~-------~~-~~~~~~~D~vi~~ag~~~~-~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~ 135 (236)
T 3e8x_A 67 SDIVVANLE-E-------DF-SHAFASIDAVVFAAGSGPH-TGADKTILIDLWGAIKTIQEAEKR-GIKRFIMVSSVGTV 135 (236)
T ss_dssp SEEEECCTT-S-------CC-GGGGTTCSEEEECCCCCTT-SCHHHHHHTTTHHHHHHHHHHHHH-TCCEEEEECCTTCS
T ss_pred ceEEEcccH-H-------HH-HHHHcCCCEEEECCCCCCC-CCccccchhhHHHHHHHHHHHHHc-CCCEEEEEecCCCC
Confidence 89999998 1 12 2556799999999997654 567888999999999999999986 78999999994332
Q ss_pred cCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhc
Q 008324 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSK 246 (570)
Q Consensus 167 ~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~ 246 (570)
.. |. ++ ...+.|+.||+.+|.++++
T Consensus 136 ~~------~~-----~~------------------------------------------~~~~~Y~~sK~~~e~~~~~-- 160 (236)
T 3e8x_A 136 DP------DQ-----GP------------------------------------------MNMRHYLVAKRLADDELKR-- 160 (236)
T ss_dssp CG------GG-----SC------------------------------------------GGGHHHHHHHHHHHHHHHH--
T ss_pred CC------CC-----Ch------------------------------------------hhhhhHHHHHHHHHHHHHH--
Confidence 11 10 00 1246799999999999985
Q ss_pred cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCC
Q 008324 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~ 326 (570)
.+++++++||+.|+|+... +.. ....+.....++++++|+|++++.++.... ..+
T Consensus 161 ~gi~~~~lrpg~v~~~~~~---------------------~~~-~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~---~~g 215 (236)
T 3e8x_A 161 SSLDYTIVRPGPLSNEEST---------------------GKV-TVSPHFSEITRSITRHDVAKVIAELVDQQH---TIG 215 (236)
T ss_dssp SSSEEEEEEECSEECSCCC---------------------SEE-EEESSCSCCCCCEEHHHHHHHHHHHTTCGG---GTT
T ss_pred CCCCEEEEeCCcccCCCCC---------------------CeE-EeccCCCcccCcEeHHHHHHHHHHHhcCcc---ccC
Confidence 7899999999999997431 111 122344456889999999999999886332 237
Q ss_pred ceEEecCCCCCcccHHHHHHHHh
Q 008324 327 NIYHVGSSLRNPVTLVSILDYGF 349 (570)
Q Consensus 327 ~iyni~s~~~~pit~~~l~~~i~ 349 (570)
++||++++ +.++.|+++.+.
T Consensus 216 ~~~~v~~~---~~~~~e~~~~i~ 235 (236)
T 3e8x_A 216 KTFEVLNG---DTPIAKVVEQLG 235 (236)
T ss_dssp EEEEEEEC---SEEHHHHHHTC-
T ss_pred CeEEEeCC---CcCHHHHHHHhc
Confidence 89999986 499999987653
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-24 Score=216.12 Aligned_cols=224 Identities=20% Similarity=0.213 Sum_probs=170.8
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+|||||||||++++++|++ + .+|+++.|+.... ++ +.+
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g---~~V~~~~r~~~~~--------------------------------~~---~~~ 41 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-R---HEVIKVYNSSEIQ--------------------------------GG---YKL 41 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-T---SCEEEEESSSCCT--------------------------------TC---EEC
T ss_pred CEEEEECCCChhHHHHHHHHhc-C---CeEEEecCCCcCC--------------------------------CC---cee
Confidence 4799999999999999999995 6 6788999975310 11 789
Q ss_pred cCCCCCCCCCchhhHHHHhCC--ccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeec
Q 008324 93 DISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~--vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~ 167 (570)
|++ +.+..+.++++ +|+|||+||..... +.++..+++|+.|+.+++++|++. +. +|||+||..+++
T Consensus 42 Dl~-------~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~iv~~SS~~~~~ 112 (273)
T 2ggs_A 42 DLT-------DFPRLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVI-DS-YIVHISTDYVFD 112 (273)
T ss_dssp CTT-------SHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TC-EEEEEEEGGGSC
T ss_pred ccC-------CHHHHHHHHHhcCCCEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHh-CC-eEEEEecceeEc
Confidence 999 44445566665 99999999987643 567788999999999999999986 55 899999999987
Q ss_pred CCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcc
Q 008324 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE 247 (570)
Q Consensus 168 ~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~ 247 (570)
...+.++|. .+. .+.+.|+.||+.+|.+++.
T Consensus 113 ~~~~~~~e~-----~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~--- 143 (273)
T 2ggs_A 113 GEKGNYKEE-----DIP-----------------------------------------NPINYYGLSKLLGETFALQ--- 143 (273)
T ss_dssp SSSCSBCTT-----SCC-----------------------------------------CCSSHHHHHHHHHHHHHCC---
T ss_pred CCCCCcCCC-----CCC-----------------------------------------CCCCHHHHHHHHHHHHHhC---
Confidence 654333333 111 2357899999999999876
Q ss_pred CCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCc
Q 008324 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (570)
Q Consensus 248 ~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~ 327 (570)
++.+++||+.|||+ . .....++.....|......++ ..++++++|+|++++.++... . .+
T Consensus 144 -~~~~~iR~~~v~G~--~---------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~--~---~g 203 (273)
T 2ggs_A 144 -DDSLIIRTSGIFRN--K---------GFPIYVYKTLKEGKTVFAFKG---YYSPISARKLASAILELLELR--K---TG 203 (273)
T ss_dssp -TTCEEEEECCCBSS--S---------SHHHHHHHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHT--C---CE
T ss_pred -CCeEEEeccccccc--c---------HHHHHHHHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcC--c---CC
Confidence 78899999999982 1 112223344455655445443 789999999999999988632 1 34
Q ss_pred eEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 328 IYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 328 iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
+||+++ +++|+.|+++.+.+.++..+
T Consensus 204 ~~~i~~---~~~s~~e~~~~~~~~~g~~~ 229 (273)
T 2ggs_A 204 IIHVAG---ERISRFELALKIKEKFNLPG 229 (273)
T ss_dssp EEECCC---CCEEHHHHHHHHHHHTTCCS
T ss_pred eEEECC---CcccHHHHHHHHHHHhCCCh
Confidence 899987 58999999999999988653
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=5.1e-25 Score=220.68 Aligned_cols=214 Identities=17% Similarity=0.146 Sum_probs=165.5
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+|||||||||||++|+++|++.| .+|+++.|+..... ..++.++
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G---~~V~~~~r~~~~~~------------------------------~~~~~~~ 48 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMA---EILRLADLSPLDPA------------------------------GPNEECV 48 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGE---EEEEEEESSCCCCC------------------------------CTTEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcC---CEEEEEecCCcccc------------------------------CCCCEEE
Confidence 46899999999999999999999998 78899999864431 2578899
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCC
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~ 170 (570)
.+|++ +.+..+.+++++|+|||+||.. ..++++..+++|+.|+.+++++|++. +.++||++||..+++...
T Consensus 49 ~~Dl~-------d~~~~~~~~~~~D~vi~~Ag~~-~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~~g~~~ 119 (267)
T 3rft_A 49 QCDLA-------DANAVNAMVAGCDGIVHLGGIS-VEKPFEQILQGNIIGLYNLYEAARAH-GQPRIVFASSNHTIGYYP 119 (267)
T ss_dssp ECCTT-------CHHHHHHHHTTCSEEEECCSCC-SCCCHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGGTTSB
T ss_pred EcCCC-------CHHHHHHHHcCCCEEEECCCCc-CcCCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcchHHhCCCC
Confidence 99999 5555678889999999999984 45678888999999999999999986 789999999998887432
Q ss_pred cccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--ccC
Q 008324 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KEN 248 (570)
Q Consensus 171 g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~~~ 248 (570)
. +.++.|+.+. .+.+.|+.||+.+|.+++.+ ..+
T Consensus 120 ~---~~~~~e~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~~a~~~g 155 (267)
T 3rft_A 120 Q---TERLGPDVPA-----------------------------------------RPDGLYGVSKCFGENLARMYFDKFG 155 (267)
T ss_dssp T---TSCBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred C---CCCCCCCCCC-----------------------------------------CCCChHHHHHHHHHHHHHHHHHHhC
Confidence 1 1122211111 34578999999999999866 458
Q ss_pred CcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCce
Q 008324 249 LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANI 328 (570)
Q Consensus 249 lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~i 328 (570)
++++++||+.|+|+.. ++....++++++|+++++..++... ... ..+
T Consensus 156 ~~~~~vr~~~v~~~~~------------------------------~~~~~~~~~~~~d~a~~~~~~~~~~--~~~-~~~ 202 (267)
T 3rft_A 156 QETALVRIGSCTPEPN------------------------------NYRMLSTWFSHDDFVSLIEAVFRAP--VLG-CPV 202 (267)
T ss_dssp CCEEEEEECBCSSSCC------------------------------STTHHHHBCCHHHHHHHHHHHHHCS--CCC-SCE
T ss_pred CeEEEEEeecccCCCC------------------------------CCCceeeEEcHHHHHHHHHHHHhCC--CCC-ceE
Confidence 9999999999998522 2334457899999999998887522 221 457
Q ss_pred EEecCCCCCcccHHHHH
Q 008324 329 YHVGSSLRNPVTLVSIL 345 (570)
Q Consensus 329 yni~s~~~~pit~~~l~ 345 (570)
++++++ ++.+|.++.
T Consensus 203 ~~~~s~--~~~~~~~~~ 217 (267)
T 3rft_A 203 VWGASA--NDAGWWDNS 217 (267)
T ss_dssp EEECCC--CTTCCBCCG
T ss_pred EEEeCC--CCCCcccCh
Confidence 777777 567776653
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.6e-25 Score=214.80 Aligned_cols=209 Identities=15% Similarity=0.234 Sum_probs=162.0
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+|||||||||++++++|++.| .+|+++.|+...... ..++.++.+
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~-----------------------------~~~~~~~~~ 48 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTD---YQIYAGARKVEQVPQ-----------------------------YNNVKAVHF 48 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSS---CEEEEEESSGGGSCC-----------------------------CTTEEEEEC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCccchhh-----------------------------cCCceEEEe
Confidence 589999999999999999999998 788999997643210 157899999
Q ss_pred cCCCCCCCCCc-hhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCCc
Q 008324 93 DISSEDLGLKD-SNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (570)
Q Consensus 93 Dl~~~~lgls~-~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~g 171 (570)
|++ + .+....+++++|+|||+||.... ..+++|+.|+.+++++|++. ++++||++||.++++...
T Consensus 49 D~~-------d~~~~~~~~~~~~d~vi~~ag~~~~-----~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~~~- 114 (219)
T 3dqp_A 49 DVD-------WTPEEMAKQLHGMDAIINVSGSGGK-----SLLKVDLYGAVKLMQAAEKA-EVKRFILLSTIFSLQPEK- 114 (219)
T ss_dssp CTT-------SCHHHHHTTTTTCSEEEECCCCTTS-----SCCCCCCHHHHHHHHHHHHT-TCCEEEEECCTTTTCGGG-
T ss_pred ccc-------CCHHHHHHHHcCCCEEEECCcCCCC-----CcEeEeHHHHHHHHHHHHHh-CCCEEEEECcccccCCCc-
Confidence 999 4 55566888899999999998652 25788999999999999986 889999999987665321
Q ss_pred ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccCCcE
Q 008324 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSL 251 (570)
Q Consensus 172 ~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp~ 251 (570)
..| ++ . .+.+.|+.+|..+|.+++ ...++++
T Consensus 115 -~~e---------~~--~------------------------------------~~~~~Y~~sK~~~e~~~~-~~~~i~~ 145 (219)
T 3dqp_A 115 -WIG---------AG--F------------------------------------DALKDYYIAKHFADLYLT-KETNLDY 145 (219)
T ss_dssp -CCS---------HH--H------------------------------------HHTHHHHHHHHHHHHHHH-HSCCCEE
T ss_pred -ccc---------cc--c------------------------------------ccccHHHHHHHHHHHHHH-hccCCcE
Confidence 111 00 0 235789999999999996 3468999
Q ss_pred EEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEe
Q 008324 252 VIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHV 331 (570)
Q Consensus 252 ~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni 331 (570)
+++||+.++|+... +. .. . ++...++++++|+|++++.++.... ..+++||+
T Consensus 146 ~ilrp~~v~g~~~~---~~------------------~~--~--~~~~~~~i~~~Dva~~i~~~l~~~~---~~g~~~~i 197 (219)
T 3dqp_A 146 TIIQPGALTEEEAT---GL------------------ID--I--NDEVSASNTIGDVADTIKELVMTDH---SIGKVISM 197 (219)
T ss_dssp EEEEECSEECSCCC---SE------------------EE--E--SSSCCCCEEHHHHHHHHHHHHTCGG---GTTEEEEE
T ss_pred EEEeCceEecCCCC---Cc------------------cc--c--CCCcCCcccHHHHHHHHHHHHhCcc---ccCcEEEe
Confidence 99999999997431 11 10 1 2567899999999999999986332 12689999
Q ss_pred cCCCCCcccHHHHHHH
Q 008324 332 GSSLRNPVTLVSILDY 347 (570)
Q Consensus 332 ~s~~~~pit~~~l~~~ 347 (570)
+++ +.++.|+.+.
T Consensus 198 ~~g---~~~~~e~~~~ 210 (219)
T 3dqp_A 198 HNG---KTAIKEALES 210 (219)
T ss_dssp EEC---SEEHHHHHHT
T ss_pred CCC---CccHHHHHHH
Confidence 886 4899988754
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.2e-25 Score=219.70 Aligned_cols=221 Identities=17% Similarity=0.174 Sum_probs=168.2
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|++.| .+|+++.|+..... ..++.++.+
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~------------------------------~~~~~~~~~ 49 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLA---HEVRLSDIVDLGAA------------------------------EAHEEIVAC 49 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTE---EEEEECCSSCCCCC------------------------------CTTEEECCC
T ss_pred ceEEEECCCCHHHHHHHHHHHhCC---CEEEEEeCCCcccc------------------------------CCCccEEEc
Confidence 689999999999999999999988 78899999764310 145788999
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCCcc
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~g~ 172 (570)
|++ +.+....+++++|+|||+||.. ..+.++..+++|+.|+.+++++|++. ++++||++||..+++...+
T Consensus 50 Dl~-------d~~~~~~~~~~~d~vi~~a~~~-~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~~~~- 119 (267)
T 3ay3_A 50 DLA-------DAQAVHDLVKDCDGIIHLGGVS-VERPWNDILQANIIGAYNLYEAARNL-GKPRIVFASSNHTIGYYPR- 119 (267)
T ss_dssp CTT-------CHHHHHHHHTTCSEEEECCSCC-SCCCHHHHHHHTHHHHHHHHHHHHHT-TCCEEEEEEEGGGSTTSBT-
T ss_pred cCC-------CHHHHHHHHcCCCEEEECCcCC-CCCCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCHHHhCCCCC-
Confidence 999 4555567888999999999976 34567788999999999999999986 7899999999999876321
Q ss_pred cccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--ccCCc
Q 008324 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KENLS 250 (570)
Q Consensus 173 i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~~~lp 250 (570)
+.+++|+.+. .+.+.|+.||+.+|.+++.+ ..+++
T Consensus 120 --~~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~~~~~~gi~ 156 (267)
T 3ay3_A 120 --TTRIDTEVPR-----------------------------------------RPDSLYGLSKCFGEDLASLYYHKFDIE 156 (267)
T ss_dssp --TSCBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred --CCCCCCCCCC-----------------------------------------CCCChHHHHHHHHHHHHHHHHHHcCCC
Confidence 1122222211 33578999999999999876 45899
Q ss_pred EEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEE
Q 008324 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (570)
Q Consensus 251 ~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn 330 (570)
++++||+.||+. |. +++...++++++|+|++++.++... .. ...+||
T Consensus 157 ~~~lrp~~v~~~---~~---------------------------~~~~~~~~~~~~dva~~~~~~~~~~--~~-~~~~~~ 203 (267)
T 3ay3_A 157 TLNIRIGSCFPK---PK---------------------------DARMMATWLSVDDFMRLMKRAFVAP--KL-GCTVVY 203 (267)
T ss_dssp EEEEEECBCSSS---CC---------------------------SHHHHHHBCCHHHHHHHHHHHHHSS--CC-CEEEEE
T ss_pred EEEEeceeecCC---CC---------------------------CCCeeeccccHHHHHHHHHHHHhCC--CC-CceeEe
Confidence 999999999852 10 1112457899999999999888632 11 146899
Q ss_pred ecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 331 VGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 331 i~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
+.++ .+.++.++.+. +.+|..|
T Consensus 204 ~~~~--~~~~~~d~~~~--~~lg~~p 225 (267)
T 3ay3_A 204 GASA--NTESWWDNDKS--AFLGWVP 225 (267)
T ss_dssp ECCS--CSSCCBCCGGG--GGGCCCC
T ss_pred cCCC--ccccccCHHHH--HHcCCCC
Confidence 8887 67788777766 5555444
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.3e-24 Score=215.97 Aligned_cols=214 Identities=14% Similarity=0.142 Sum_probs=160.8
Q ss_pred EEEEECCcchhHHHHHHHHHHh--CCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 14 TILVSGVTGFVAKVFIEKILRV--QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~--~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|||||||||++++++|++. | .+|+++.|+..... .+. ..++.++.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g---~~V~~~~r~~~~~~---~~~------------------------~~~~~~~~ 50 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPA---SQIVAIVRNPAKAQ---ALA------------------------AQGITVRQ 50 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCG---GGEEEEESCTTTCH---HHH------------------------HTTCEEEE
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCC---ceEEEEEcChHhhh---hhh------------------------cCCCeEEE
Confidence 5899999999999999999997 6 67899999764321 111 14678899
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCCc
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~g 171 (570)
+|++ +.+....+++++|+|||+||.. . ..|+.++++++++|++. ++++|||+||..++.
T Consensus 51 ~D~~-------d~~~~~~~~~~~d~vi~~a~~~-~--------~~~~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~---- 109 (286)
T 2zcu_A 51 ADYG-------DEAALTSALQGVEKLLLISSSE-V--------GQRAPQHRNVINAAKAA-GVKFIAYTSLLHADT---- 109 (286)
T ss_dssp CCTT-------CHHHHHHHTTTCSEEEECC-----------------CHHHHHHHHHHHH-TCCEEEEEEETTTTT----
T ss_pred cCCC-------CHHHHHHHHhCCCEEEEeCCCC-c--------hHHHHHHHHHHHHHHHc-CCCEEEEECCCCCCC----
Confidence 9999 4555668889999999999852 1 25899999999999987 889999999986541
Q ss_pred ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccCCcE
Q 008324 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSL 251 (570)
Q Consensus 172 ~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp~ 251 (570)
.+..|+.+|..+|+++.+ .++++
T Consensus 110 -------------------------------------------------------~~~~y~~sK~~~e~~~~~--~~~~~ 132 (286)
T 2zcu_A 110 -------------------------------------------------------SPLGLADEHIETEKMLAD--SGIVY 132 (286)
T ss_dssp -------------------------------------------------------CCSTTHHHHHHHHHHHHH--HCSEE
T ss_pred -------------------------------------------------------CcchhHHHHHHHHHHHHH--cCCCe
Confidence 024699999999999986 68999
Q ss_pred EEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEe
Q 008324 252 VIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHV 331 (570)
Q Consensus 252 ~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni 331 (570)
+++||+.++++.. .+ ... ....|.. ..++++...++++++|+|++++.++... . ..+++||+
T Consensus 133 ~ilrp~~~~~~~~----~~------~~~---~~~~~~~--~~~~~~~~~~~i~~~Dva~~~~~~~~~~-~--~~g~~~~i 194 (286)
T 2zcu_A 133 TLLRNGWYSENYL----AS------APA---ALEHGVF--IGAAGDGKIASATRADYAAAAARVISEA-G--HEGKVYEL 194 (286)
T ss_dssp EEEEECCBHHHHH----TT------HHH---HHHHTEE--EESCTTCCBCCBCHHHHHHHHHHHHHSS-S--CTTCEEEE
T ss_pred EEEeChHHhhhhH----HH------hHH---hhcCCce--eccCCCCccccccHHHHHHHHHHHhcCC-C--CCCceEEE
Confidence 9999987766321 11 111 1123333 2456678899999999999999988632 1 13679999
Q ss_pred cCCCCCcccHHHHHHHHhhhcccC
Q 008324 332 GSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 332 ~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
+++ .++|+.|+++.+.+.+|..
T Consensus 195 ~~~--~~~s~~e~~~~i~~~~g~~ 216 (286)
T 2zcu_A 195 AGD--SAWTLTQLAAELTKQSGKQ 216 (286)
T ss_dssp CCS--SCBCHHHHHHHHHHHHSSC
T ss_pred eCC--CcCCHHHHHHHHHHHHCCC
Confidence 998 7899999999999998864
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=6.8e-24 Score=220.34 Aligned_cols=233 Identities=15% Similarity=0.151 Sum_probs=169.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCccc-HHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS-AALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~-~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+..++|||||||||||++|++.|++.| ++|++++|+..... ..+++. + +. ..++.
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g---~~V~~l~R~~~~~~~~~~~~~-~---------l~-----------~~~v~ 63 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAH---RPTYILARPGPRSPSKAKIFK-A---------LE-----------DKGAI 63 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTT---CCEEEEECSSCCCHHHHHHHH-H---------HH-----------HTTCE
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCC---CCEEEEECCCCCChhHHHHHH-H---------HH-----------hCCcE
Confidence 446899999999999999999999988 67899999873321 111111 0 10 26789
Q ss_pred EEeccCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceee
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~ 166 (570)
++.+|++ +.+.+..+++ ++|+|||+||.. |+.++.+++++|++.+++++||+ |+ +
T Consensus 64 ~~~~Dl~-------d~~~l~~~~~~~~~d~Vi~~a~~~------------n~~~~~~l~~aa~~~g~v~~~v~-S~---~ 120 (346)
T 3i6i_A 64 IVYGLIN-------EQEAMEKILKEHEIDIVVSTVGGE------------SILDQIALVKAMKAVGTIKRFLP-SE---F 120 (346)
T ss_dssp EEECCTT-------CHHHHHHHHHHTTCCEEEECCCGG------------GGGGHHHHHHHHHHHCCCSEEEC-SC---C
T ss_pred EEEeecC-------CHHHHHHHHhhCCCCEEEECCchh------------hHHHHHHHHHHHHHcCCceEEee-cc---c
Confidence 9999999 5555667888 999999999972 89999999999999833999986 42 3
Q ss_pred cCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhc
Q 008324 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSK 246 (570)
Q Consensus 167 ~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~ 246 (570)
|. ..+|. .+. .+.+.|+.+|..+|+++++
T Consensus 121 g~---~~~e~-----~~~-----------------------------------------~p~~~y~~sK~~~e~~l~~-- 149 (346)
T 3i6i_A 121 GH---DVNRA-----DPV-----------------------------------------EPGLNMYREKRRVRQLVEE-- 149 (346)
T ss_dssp SS---CTTTC-----CCC-----------------------------------------TTHHHHHHHHHHHHHHHHH--
T ss_pred CC---CCCcc-----CcC-----------------------------------------CCcchHHHHHHHHHHHHHH--
Confidence 32 11221 111 2346799999999999988
Q ss_pred cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCC
Q 008324 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~ 326 (570)
.+++++++||+.++|.... ++... ......+....++++++...++++++|+|++++.++.... ..+
T Consensus 150 ~g~~~tivrpg~~~g~~~~---~~~~~-------~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~---~~~ 216 (346)
T 3i6i_A 150 SGIPFTYICCNSIASWPYY---NNIHP-------SEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVR---TLN 216 (346)
T ss_dssp TTCCBEEEECCEESSCCCS---CC------------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGG---GTT
T ss_pred cCCCEEEEEecccccccCc---ccccc-------ccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCcc---ccC
Confidence 6899999999999996432 21110 1111233445678899999999999999999999886321 125
Q ss_pred ceEEecC-CCCCcccHHHHHHHHhhhcccC
Q 008324 327 NIYHVGS-SLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 327 ~iyni~s-~~~~pit~~~l~~~i~~~~~~~ 355 (570)
++||+++ + +++|+.|+++.+.+.+|..
T Consensus 217 ~~~~i~g~~--~~~s~~e~~~~~~~~~g~~ 244 (346)
T 3i6i_A 217 KSVHFRPSC--NCLNINELASVWEKKIGRT 244 (346)
T ss_dssp EEEECCCGG--GEECHHHHHHHHHHHHTSC
T ss_pred eEEEEeCCC--CCCCHHHHHHHHHHHHCCC
Confidence 7888873 4 7899999999999998875
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.91 E-value=8.3e-24 Score=205.36 Aligned_cols=215 Identities=11% Similarity=0.010 Sum_probs=148.8
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|++.| .+|++++|+.... . ++ ...++.++.+
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~------~-~~--------------------~~~~~~~~~~ 50 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRG---HEVLAVVRDPQKA------A-DR--------------------LGATVATLVK 50 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH------H-HH--------------------TCTTSEEEEC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCC---CEEEEEEeccccc------c-cc--------------------cCCCceEEec
Confidence 579999999999999999999998 7889999964321 1 00 1257899999
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCCc-
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG- 171 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~g- 171 (570)
|+++++ . ..++++|+|||+||...... ...+|+.++++++++|++. + +++|++||+.+.....+
T Consensus 51 D~~d~~-------~--~~~~~~d~vi~~ag~~~~~~----~~~~n~~~~~~l~~a~~~~-~-~~~v~~SS~~~~~~~~~~ 115 (224)
T 3h2s_A 51 EPLVLT-------E--ADLDSVDAVVDALSVPWGSG----RGYLHLDFATHLVSLLRNS-D-TLAVFILGSASLAMPGAD 115 (224)
T ss_dssp CGGGCC-------H--HHHTTCSEEEECCCCCTTSS----CTHHHHHHHHHHHHTCTTC-C-CEEEEECCGGGSBCTTCS
T ss_pred cccccc-------H--hhcccCCEEEECCccCCCcc----hhhHHHHHHHHHHHHHHHc-C-CcEEEEecceeeccCCCC
Confidence 999543 2 55688999999999862212 2467999999999999997 6 89999999765443221
Q ss_pred ---ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-cc
Q 008324 172 ---LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-KE 247 (570)
Q Consensus 172 ---~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~-~~ 247 (570)
..+|... ..+.+.|+.+|..+|.+.... ..
T Consensus 116 ~~~~~~~~~~----------------------------------------------~~~~~~y~~sK~~~e~~~~~~~~~ 149 (224)
T 3h2s_A 116 HPMILDFPES----------------------------------------------AASQPWYDGALYQYYEYQFLQMNA 149 (224)
T ss_dssp SCGGGGCCGG----------------------------------------------GGGSTTHHHHHHHHHHHHHHTTCT
T ss_pred ccccccCCCC----------------------------------------------CccchhhHHHHHHHHHHHHHHhcC
Confidence 1111100 022467999999999653322 56
Q ss_pred CCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCc
Q 008324 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (570)
Q Consensus 248 ~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~ 327 (570)
+++++++||+.|+|+.. ..++... .. .+. .+....++++++|+|++++.++... ...++
T Consensus 150 ~i~~~ivrp~~v~g~~~--~~~~~~~------------~~---~~~-~~~~~~~~i~~~DvA~~~~~~l~~~---~~~g~ 208 (224)
T 3h2s_A 150 NVNWIGISPSEAFPSGP--ATSYVAG------------KD---TLL-VGEDGQSHITTGNMALAILDQLEHP---TAIRD 208 (224)
T ss_dssp TSCEEEEEECSBCCCCC--CCCEEEE------------SS---BCC-CCTTSCCBCCHHHHHHHHHHHHHSC---CCTTS
T ss_pred CCcEEEEcCccccCCCc--ccCceec------------cc---ccc-cCCCCCceEeHHHHHHHHHHHhcCc---cccCC
Confidence 89999999999999832 2222110 01 111 1234468999999999999998632 22378
Q ss_pred eEEecCCCCCcccH
Q 008324 328 IYHVGSSLRNPVTL 341 (570)
Q Consensus 328 iyni~s~~~~pit~ 341 (570)
+|++++. ++.++
T Consensus 209 ~~~~~~~--~~~~~ 220 (224)
T 3h2s_A 209 RIVVRDA--DLEHH 220 (224)
T ss_dssp EEEEEEC--C----
T ss_pred EEEEecC--cchhc
Confidence 9999987 44444
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-23 Score=207.70 Aligned_cols=233 Identities=15% Similarity=0.112 Sum_probs=166.7
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+|+|||||||||++++++|++.++. .+|+++.|+.. ++. ++ ..++.++
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g-~~V~~~~r~~~------~~~-~~---------------------~~~~~~~ 53 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDK-FVAKGLVRSAQ------GKE-KI---------------------GGEADVF 53 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTT-CEEEEEESCHH------HHH-HT---------------------TCCTTEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCC-cEEEEEEcCCC------chh-hc---------------------CCCeeEE
Confidence 5789999999999999999999998311 68899999642 111 00 2466789
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc----------------ccHHHHHHHhHHHHHHHHHHHHHccCc
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD----------------ERYDVAFGINTLGVIHLVNFAKKCVKL 154 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~----------------~~~~~~~~~Nv~gt~~ll~la~~~~~l 154 (570)
.+|++ +.+..+.+++++|+|||+||..... +.....+++|+.|+.+++++|++. ++
T Consensus 54 ~~D~~-------d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~ 125 (253)
T 1xq6_A 54 IGDIT-------DADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-GV 125 (253)
T ss_dssp ECCTT-------SHHHHHHHHTTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-TC
T ss_pred EecCC-------CHHHHHHHHcCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc-CC
Confidence 99999 5555668889999999999975321 112245789999999999999987 78
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
++||++||..++.... +..+ .....|..+
T Consensus 126 ~~iv~~SS~~~~~~~~------------~~~~---------------------------------------~~~~~y~~s 154 (253)
T 1xq6_A 126 KHIVVVGSMGGTNPDH------------PLNK---------------------------------------LGNGNILVW 154 (253)
T ss_dssp SEEEEEEETTTTCTTC------------GGGG---------------------------------------GGGCCHHHH
T ss_pred CEEEEEcCccCCCCCC------------cccc---------------------------------------ccchhHHHH
Confidence 9999999986532110 0000 001458999
Q ss_pred HHHHHHHHHHhccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHH
Q 008324 235 KTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (570)
Q Consensus 235 K~~aE~lv~~~~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~ 314 (570)
|..+|.++++ .+++++++||+.++|+..... .... + ....++++ ..++++++|+|++++.
T Consensus 155 K~~~e~~~~~--~~i~~~~vrpg~v~~~~~~~~-~~~~---~-----------~~~~~~~~---~~~~~~~~Dva~~~~~ 214 (253)
T 1xq6_A 155 KRKAEQYLAD--SGTPYTIIRAGGLLDKEGGVR-ELLV---G-----------KDDELLQT---DTKTVPRADVAEVCIQ 214 (253)
T ss_dssp HHHHHHHHHT--SSSCEEEEEECEEECSCSSSS-CEEE---E-----------STTGGGGS---SCCEEEHHHHHHHHHH
T ss_pred HHHHHHHHHh--CCCceEEEecceeecCCcchh-hhhc---c-----------CCcCCcCC---CCcEEcHHHHHHHHHH
Confidence 9999999986 689999999999999764211 1110 0 00011111 2468999999999998
Q ss_pred HHHHhhCCCCCCceEEecCCCC-CcccHHHHHHHHhhhccc
Q 008324 315 AMVAHAKQPSDANIYHVGSSLR-NPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 315 a~~~~~~~~~~~~iyni~s~~~-~pit~~~l~~~i~~~~~~ 354 (570)
++.... ..+++||++++.. +++++.|+++.+.+.+|+
T Consensus 215 ~~~~~~---~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~ 252 (253)
T 1xq6_A 215 ALLFEE---AKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR 252 (253)
T ss_dssp HTTCGG---GTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred HHcCcc---ccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence 886322 1267999998631 469999999999988775
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.90 E-value=7e-23 Score=208.11 Aligned_cols=231 Identities=13% Similarity=0.039 Sum_probs=170.4
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|+|||||||+|++++++|++.+. .+|+++.|+...... +.+. ..++.++.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~--~~V~~~~R~~~~~~~-~~l~------------------------~~~~~~~~ 57 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGT--FKVRVVTRNPRKKAA-KELR------------------------LQGAEVVQ 57 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCS--SEEEEEESCTTSHHH-HHHH------------------------HTTCEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCC--ceEEEEEcCCCCHHH-HHHH------------------------HCCCEEEE
Confidence 58999999999999999999999872 578999998654311 1111 15688999
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCCc
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~g 171 (570)
+|++ +.+....+++++|+|||+|+.... ...+.|+.++.+++++|++. ++++||++||..+++...+
T Consensus 58 ~D~~-------d~~~l~~~~~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~~~aa~~~-gv~~iv~~S~~~~~~~~~~ 124 (299)
T 2wm3_A 58 GDQD-------DQVIMELALNGAYATFIVTNYWES-----CSQEQEVKQGKLLADLARRL-GLHYVVYSGLENIKKLTAG 124 (299)
T ss_dssp CCTT-------CHHHHHHHHTTCSEEEECCCHHHH-----TCHHHHHHHHHHHHHHHHHH-TCSEEEECCCCCHHHHTTT
T ss_pred ecCC-------CHHHHHHHHhcCCEEEEeCCCCcc-----ccchHHHHHHHHHHHHHHHc-CCCEEEEEcCccccccCCC
Confidence 9999 555566888999999999985311 02457889999999999986 8999999888766542110
Q ss_pred ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccCCcE
Q 008324 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSL 251 (570)
Q Consensus 172 ~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp~ 251 (570)
.+++.|..+|..+|+++++ .++++
T Consensus 125 ------------------------------------------------------~~~~~y~~sK~~~e~~~~~--~gi~~ 148 (299)
T 2wm3_A 125 ------------------------------------------------------RLAAAHFDGKGEVEEYFRD--IGVPM 148 (299)
T ss_dssp ------------------------------------------------------SCCCHHHHHHHHHHHHHHH--HTCCE
T ss_pred ------------------------------------------------------cccCchhhHHHHHHHHHHH--CCCCE
Confidence 2346799999999999987 58999
Q ss_pred EEEecCceecCCCCCCCccccCccchHHHHHHHhcCCcee-eecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEE
Q 008324 252 VIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRC-LVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (570)
Q Consensus 252 ~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~-~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn 330 (570)
+++||+.++|+... .|.... ...|.... ....++...++|+++|+|++++.++...... .+++||
T Consensus 149 ~ilrp~~~~~~~~~---~~~~~~---------~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~--~g~~~~ 214 (299)
T 2wm3_A 149 TSVRLPCYFENLLS---HFLPQK---------APDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKY--VGQNIG 214 (299)
T ss_dssp EEEECCEEGGGGGT---TTCCEE---------CTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHH--TTCEEE
T ss_pred EEEeecHHhhhchh---hcCCcc---------cCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhh--CCeEEE
Confidence 99999999996432 121110 11232111 1234667899999999999999988632111 257999
Q ss_pred ecCCCCCcccHHHHHHHHhhhcccC
Q 008324 331 VGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 331 i~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
+++ .++|+.|+++.+.+.+|+.
T Consensus 215 ~~g---~~~s~~e~~~~~~~~~g~~ 236 (299)
T 2wm3_A 215 LST---CRHTAEEYAALLTKHTRKV 236 (299)
T ss_dssp CCS---EEECHHHHHHHHHHHHSSC
T ss_pred eee---ccCCHHHHHHHHHHHHCCC
Confidence 985 4799999999999998864
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=8.6e-23 Score=206.28 Aligned_cols=216 Identities=12% Similarity=0.072 Sum_probs=159.8
Q ss_pred CEEEEECCcchhHHHHHHHHHHh-CCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 13 KTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~-~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
|+|||||||||||++++++|++. + .+|++++|+...... ....++.++.
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g---~~V~~~~R~~~~~~~---------------------------~~~~~v~~~~ 50 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHI---DHFHIGVRNVEKVPD---------------------------DWRGKVSVRQ 50 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTC---TTEEEEESSGGGSCG---------------------------GGBTTBEEEE
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCC---CcEEEEECCHHHHHH---------------------------hhhCCCEEEE
Confidence 57999999999999999999886 6 678999997643211 0136789999
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCCc
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~g 171 (570)
+|++ +.+....+++++|+|||+|+..... ..|+.++++++++|++. ++++||++||... ..
T Consensus 51 ~D~~-------d~~~l~~~~~~~d~vi~~a~~~~~~-------~~~~~~~~~l~~aa~~~-gv~~iv~~Ss~~~---~~- 111 (289)
T 3e48_A 51 LDYF-------NQESMVEAFKGMDTVVFIPSIIHPS-------FKRIPEVENLVYAAKQS-GVAHIIFIGYYAD---QH- 111 (289)
T ss_dssp CCTT-------CHHHHHHHTTTCSEEEECCCCCCSH-------HHHHHHHHHHHHHHHHT-TCCEEEEEEESCC---ST-
T ss_pred cCCC-------CHHHHHHHHhCCCEEEEeCCCCccc-------hhhHHHHHHHHHHHHHc-CCCEEEEEcccCC---CC-
Confidence 9999 5555678889999999999975432 34899999999999997 8999999999431 11
Q ss_pred ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccCCcE
Q 008324 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSL 251 (570)
Q Consensus 172 ~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp~ 251 (570)
..+ ..+...+..+|..+.+ .++++
T Consensus 112 ---~~~---------------------------------------------------~~~~~~~~~~e~~~~~--~g~~~ 135 (289)
T 3e48_A 112 ---NNP---------------------------------------------------FHMSPYFGYASRLLST--SGIDY 135 (289)
T ss_dssp ---TCC---------------------------------------------------STTHHHHHHHHHHHHH--HCCEE
T ss_pred ---CCC---------------------------------------------------CccchhHHHHHHHHHH--cCCCE
Confidence 001 1122223345666555 68999
Q ss_pred EEEecCceecCCCCCCCccccCccchHHHHHHH-hcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEE
Q 008324 252 VIIRPTVVSGTYKEPFPGWVEDLKTINTLFVAS-AQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (570)
Q Consensus 252 ~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~-~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn 330 (570)
+|+||+.++|+.. .| +... ..+. ...+.++...++|+++|+|++++.++..... .+++||
T Consensus 136 ~ilrp~~~~~~~~----~~----------~~~~~~~~~--~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~---~g~~~~ 196 (289)
T 3e48_A 136 TYVRMAMYMDPLK----PY----------LPELMNMHK--LIYPAGDGRINYITRNDIARGVIAIIKNPDT---WGKRYL 196 (289)
T ss_dssp EEEEECEESTTHH----HH----------HHHHHHHTE--ECCCCTTCEEEEECHHHHHHHHHHHHHCGGG---TTCEEE
T ss_pred EEEeccccccccH----HH----------HHHHHHCCC--EecCCCCceeeeEEHHHHHHHHHHHHcCCCc---CCceEE
Confidence 9999999998521 11 1111 2222 3345678899999999999999998874322 167999
Q ss_pred ecCCCCCcccHHHHHHHHhhhcccC
Q 008324 331 VGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 331 i~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
++ + .++|+.|+++.+.+.+|+.
T Consensus 197 ~~-~--~~~s~~e~~~~~~~~~g~~ 218 (289)
T 3e48_A 197 LS-G--YSYDMKELAAILSEASGTE 218 (289)
T ss_dssp EC-C--EEEEHHHHHHHHHHHHTSC
T ss_pred eC-C--CcCCHHHHHHHHHHHHCCc
Confidence 99 8 8999999999999999874
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=6.9e-24 Score=204.45 Aligned_cols=207 Identities=16% Similarity=0.092 Sum_probs=155.4
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+|+|+|||||||||++++++|++.+. +.+|+++.|+.... ..++.++
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~-~~~V~~~~r~~~~~-------------------------------~~~~~~~ 51 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPT-LAKVIAPARKALAE-------------------------------HPRLDNP 51 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTT-CCEEECCBSSCCCC-------------------------------CTTEECC
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCC-CCeEEEEeCCCccc-------------------------------CCCceEE
Confidence 468999999999999999999999873 12889999976431 2567888
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCC
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~ 169 (570)
.+|++ +.+....++ +|+|||+|+.... .+.++..+++|+.++.+++++|++. ++++||++||..+++.
T Consensus 52 ~~D~~-------~~~~~~~~~--~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~- 120 (215)
T 2a35_A 52 VGPLA-------ELLPQLDGS--IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGADAK- 120 (215)
T ss_dssp BSCHH-------HHGGGCCSC--CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTT-
T ss_pred ecccc-------CHHHHHHhh--hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHc-CCCEEEEECCcccCCC-
Confidence 99998 333333444 8999999997643 2467788999999999999999986 8899999999877642
Q ss_pred CcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccCC
Q 008324 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENL 249 (570)
Q Consensus 170 ~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~l 249 (570)
+++.|+.+|..+|+++++ .++
T Consensus 121 ---------------------------------------------------------~~~~y~~sK~~~e~~~~~--~~~ 141 (215)
T 2a35_A 121 ---------------------------------------------------------SSIFYNRVKGELEQALQE--QGW 141 (215)
T ss_dssp ---------------------------------------------------------CSSHHHHHHHHHHHHHTT--SCC
T ss_pred ---------------------------------------------------------CccHHHHHHHHHHHHHHH--cCC
Confidence 236799999999999987 489
Q ss_pred c-EEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCce
Q 008324 250 S-LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANI 328 (570)
Q Consensus 250 p-~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~i 328 (570)
+ ++++||+.++|+... +.+.+.+. .... .+ .+ ...++++++|+|++++.++.. +. +++
T Consensus 142 ~~~~~vrp~~v~g~~~~--~~~~~~~~----------~~~~-~~-~~--~~~~~i~~~Dva~~~~~~~~~----~~-~~~ 200 (215)
T 2a35_A 142 PQLTIARPSLLFGPREE--FRLAEILA----------APIA-RI-LP--GKYHGIEACDLARALWRLALE----EG-KGV 200 (215)
T ss_dssp SEEEEEECCSEESTTSC--EEGGGGTT----------CCCC--------CHHHHHHHHHHHHHHHHHHTC----CC-SEE
T ss_pred CeEEEEeCceeeCCCCc--chHHHHHH----------Hhhh-hc-cC--CCcCcEeHHHHHHHHHHHHhc----CC-CCc
Confidence 9 999999999998653 12222111 1111 11 12 257899999999999998852 11 679
Q ss_pred EEecCCCCCcccHH
Q 008324 329 YHVGSSLRNPVTLV 342 (570)
Q Consensus 329 yni~s~~~~pit~~ 342 (570)
||++++ +++++.
T Consensus 201 ~~i~~~--~~~~~~ 212 (215)
T 2a35_A 201 RFVESD--ELRKLG 212 (215)
T ss_dssp EEEEHH--HHHHHH
T ss_pred eEEcHH--HHHHhh
Confidence 999987 555553
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.8e-23 Score=200.91 Aligned_cols=218 Identities=14% Similarity=0.085 Sum_probs=138.4
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+|||||||||++|+++|++.| .+|++++|+.... . ++ .+++.++.+
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~------~-~~---------------------~~~~~~~~~ 49 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRG---HEVTAIVRNAGKI------T-QT---------------------HKDINILQK 49 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCSHHH------H-HH---------------------CSSSEEEEC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCC---CEEEEEEcCchhh------h-hc---------------------cCCCeEEec
Confidence 589999999999999999999998 7889999975321 1 00 157889999
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCCcc
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~g~ 172 (570)
|++++ +. ..++++|+|||+||.... ...+|+.++++++++|++. +.+++|++||..++....+.
T Consensus 50 D~~d~-------~~--~~~~~~d~vi~~ag~~~~------~~~~~~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~ 113 (221)
T 3ew7_A 50 DIFDL-------TL--SDLSDQNVVVDAYGISPD------EAEKHVTSLDHLISVLNGT-VSPRLLVVGGAASLQIDEDG 113 (221)
T ss_dssp CGGGC-------CH--HHHTTCSEEEECCCSSTT------TTTSHHHHHHHHHHHHCSC-CSSEEEEECCCC--------
T ss_pred cccCh-------hh--hhhcCCCEEEECCcCCcc------ccchHHHHHHHHHHHHHhc-CCceEEEEecceEEEcCCCC
Confidence 99954 32 456889999999998432 1466999999999999986 78999999998765432210
Q ss_pred cccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--ccCCc
Q 008324 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KENLS 250 (570)
Q Consensus 173 i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~~~lp 250 (570)
.+..++.+ ..+.+.|+.+|..+|.+..-. ..+++
T Consensus 114 ---~~~~~~~~-----------------------------------------~~~~~~y~~~k~~~e~~~~~~~~~~gi~ 149 (221)
T 3ew7_A 114 ---NTLLESKG-----------------------------------------LREAPYYPTARAQAKQLEHLKSHQAEFS 149 (221)
T ss_dssp -------------------------------------------------------CCCSCCHHHHHHHHHHHHTTTTTSC
T ss_pred ---ccccccCC-----------------------------------------CCCHHHHHHHHHHHHHHHHHHhhccCcc
Confidence 00000000 023456999999999973222 46899
Q ss_pred EEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEE
Q 008324 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (570)
Q Consensus 251 ~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn 330 (570)
++++||+.|+|+.. ..+. +. .. +....+.+++ .++|+++|+|++++.++... ...+++||
T Consensus 150 ~~ivrp~~v~g~~~--~~~~---~~--------~~-~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~---~~~g~~~~ 209 (221)
T 3ew7_A 150 WTYISPSAMFEPGE--RTGD---YQ--------IG-KDHLLFGSDG---NSFISMEDYAIAVLDEIERP---NHLNEHFT 209 (221)
T ss_dssp EEEEECSSCCCCC--------------------------------------CCCHHHHHHHHHHHHHSC---SCTTSEEE
T ss_pred EEEEeCcceecCCC--ccCc---eE--------ec-cccceecCCC---CceEeHHHHHHHHHHHHhCc---cccCCEEE
Confidence 99999999999722 1110 00 00 1111122222 36899999999999998732 22378999
Q ss_pred ecCCCCCcccHHH
Q 008324 331 VGSSLRNPVTLVS 343 (570)
Q Consensus 331 i~s~~~~pit~~~ 343 (570)
++++ .+.+.+|
T Consensus 210 ~~~~--~~~~~~~ 220 (221)
T 3ew7_A 210 VAGK--LEHHHHH 220 (221)
T ss_dssp CCC----------
T ss_pred ECCC--Ccccccc
Confidence 9998 5655543
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-22 Score=199.82 Aligned_cols=211 Identities=18% Similarity=0.133 Sum_probs=152.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+|||||||||++++++|++.|. ..+|+++.|+....... ..+++.+
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~-~~~V~~~~r~~~~~~~~---------------------------~~~~~~~ 67 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGL-FSKVTLIGRRKLTFDEE---------------------------AYKNVNQ 67 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTC-CSEEEEEESSCCCCCSG---------------------------GGGGCEE
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCC-CCEEEEEEcCCCCcccc---------------------------ccCCceE
Confidence 5789999999999999999999999982 11889999986543110 0146788
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCC
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~ 169 (570)
+.+|++ +.+..+.+++++|+|||+||.......++..+++|+.|+.++++++++. +.++||++||..+++.
T Consensus 68 ~~~D~~-------d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~iv~~SS~~~~~~- 138 (242)
T 2bka_A 68 EVVDFE-------KLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGADKS- 138 (242)
T ss_dssp EECCGG-------GGGGGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTT-
T ss_pred EecCcC-------CHHHHHHHhcCCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHC-CCCEEEEEccCcCCCC-
Confidence 999999 4444457788999999999986555556778899999999999999986 7889999999877642
Q ss_pred CcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccCC
Q 008324 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENL 249 (570)
Q Consensus 170 ~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~l 249 (570)
..+.|+.||+.+|.+++.. ++
T Consensus 139 ---------------------------------------------------------~~~~Y~~sK~~~e~~~~~~--~~ 159 (242)
T 2bka_A 139 ---------------------------------------------------------SNFLYLQVKGEVEAKVEEL--KF 159 (242)
T ss_dssp ---------------------------------------------------------CSSHHHHHHHHHHHHHHTT--CC
T ss_pred ---------------------------------------------------------CcchHHHHHHHHHHHHHhc--CC
Confidence 1357999999999999874 57
Q ss_pred -cEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCce
Q 008324 250 -SLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANI 328 (570)
Q Consensus 250 -p~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~i 328 (570)
+++++||+.|+|+...+. ....+..... +..+...+ ...+++++|+|++++.++... ....+
T Consensus 160 ~~~~~vrpg~v~~~~~~~~--------~~~~~~~~~~-~~~~~~~~----~~~~~~~~dva~~~~~~~~~~----~~~~~ 222 (242)
T 2bka_A 160 DRYSVFRPGVLLCDRQESR--------PGEWLVRKFF-GSLPDSWA----SGHSVPVVTVVRAMLNNVVRP----RDKQM 222 (242)
T ss_dssp SEEEEEECCEEECTTGGGS--------HHHHHHHHHH-CSCCTTGG----GGTEEEHHHHHHHHHHHHTSC----CCSSE
T ss_pred CCeEEEcCceecCCCCCCc--------HHHHHHHHhh-cccCcccc----CCcccCHHHHHHHHHHHHhCc----cccCe
Confidence 599999999999864320 0111111221 11111111 134899999999999988522 11346
Q ss_pred EEecC
Q 008324 329 YHVGS 333 (570)
Q Consensus 329 yni~s 333 (570)
|++.+
T Consensus 223 ~~~~~ 227 (242)
T 2bka_A 223 ELLEN 227 (242)
T ss_dssp EEEEH
T ss_pred eEeeH
Confidence 66543
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.4e-22 Score=209.55 Aligned_cols=233 Identities=13% Similarity=0.082 Sum_probs=167.5
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+|+|+|||||||||++|+++|++.+ .+|++++|+..... .+.+.+ ..++.++
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~-~~~l~~-----------------------~~~v~~v 56 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVG---HHVRAQVHSLKGLI-AEELQA-----------------------IPNVTLF 56 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTT---CCEEEEESCSCSHH-HHHHHT-----------------------STTEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEECCCChhh-HHHHhh-----------------------cCCcEEE
Confidence 36899999999999999999999988 67889999765431 111110 1468899
Q ss_pred ecc-CCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccC-ceEEEEEecceeecC
Q 008324 91 PGD-ISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVK-LKVFVHVSTAYVAGE 168 (570)
Q Consensus 91 ~gD-l~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~-l~~~V~vSTa~v~~~ 168 (570)
.+| ++ +.+....+++++|+|||+|+.... ..|+.+ ++++++|++. + +++|||+||.++..
T Consensus 57 ~~D~l~-------d~~~l~~~~~~~d~Vi~~a~~~~~--------~~~~~~-~~l~~aa~~~-g~v~~~V~~SS~~~~~- 118 (352)
T 1xgk_A 57 QGPLLN-------NVPLMDTLFEGAHLAFINTTSQAG--------DEIAIG-KDLADAAKRA-GTIQHYIYSSMPDHSL- 118 (352)
T ss_dssp ESCCTT-------CHHHHHHHHTTCSEEEECCCSTTS--------CHHHHH-HHHHHHHHHH-SCCSEEEEEECCCGGG-
T ss_pred ECCccC-------CHHHHHHHHhcCCEEEEcCCCCCc--------HHHHHH-HHHHHHHHHc-CCccEEEEeCCccccc-
Confidence 999 98 455556788999999999986421 347777 9999999987 6 89999999975210
Q ss_pred CCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccC
Q 008324 169 RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKEN 248 (570)
Q Consensus 169 ~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~ 248 (570)
+. . ..++.|..||+.+|+++++ .+
T Consensus 119 ---------~~--~-------------------------------------------~~~~~y~~sK~~~E~~~~~--~g 142 (352)
T 1xgk_A 119 ---------YG--P-------------------------------------------WPAVPMWAPKFTVENYVRQ--LG 142 (352)
T ss_dssp ---------TS--S-------------------------------------------CCCCTTTHHHHHHHHHHHT--SS
T ss_pred ---------cC--C-------------------------------------------CCCccHHHHHHHHHHHHHH--cC
Confidence 10 0 1246799999999999987 48
Q ss_pred CcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCce-eeecCCCeeeeeeeh-HHHHHHHHHHHHHhhCCCCCC
Q 008324 249 LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLR-CLVGETKVIMDVIPV-DMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 249 lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~-~~~~~~~~~~d~VpV-Ddva~aii~a~~~~~~~~~~~ 326 (570)
++++|+||+ +||+...... ..-+.. .....|... .++++++...+++++ ||+|++++.++...... ..+
T Consensus 143 i~~~ivrpg-~~g~~~~~~~--~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~-~~g 213 (352)
T 1xgk_A 143 LPSTFVYAG-IYNNNFTSLP--YPLFQM-----ELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQK-WNG 213 (352)
T ss_dssp SCEEEEEEC-EEGGGCBSSS--CSSCBE-----EECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHH-HTT
T ss_pred CCEEEEecc-eecCCchhcc--cccccc-----cccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchh-hCC
Confidence 999999987 5776432110 000000 001234332 346778889999999 99999999988642110 026
Q ss_pred ceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 327 NIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 327 ~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
++||+++ .++|+.|+++.+.+.+|..+
T Consensus 214 ~~~~l~~---~~~s~~e~~~~i~~~~G~~~ 240 (352)
T 1xgk_A 214 HRIALTF---ETLSPVQVCAAFSRALNRRV 240 (352)
T ss_dssp CEEEECS---EEECHHHHHHHHHHHHTSCE
T ss_pred eEEEEec---CCCCHHHHHHHHHHHHCCCC
Confidence 7999995 46999999999999998753
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=4.8e-22 Score=189.88 Aligned_cols=202 Identities=13% Similarity=0.096 Sum_probs=149.2
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|+|||||||||++++++|++.| .+|+++.|++..... ....++.++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g---~~V~~~~r~~~~~~~---------------------------~~~~~~~~~~ 52 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAG---YEVTVLVRDSSRLPS---------------------------EGPRPAHVVV 52 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCGGGSCS---------------------------SSCCCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC---CeEEEEEeChhhccc---------------------------ccCCceEEEE
Confidence 4899999999999999999999988 688999997543210 0125788999
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCCc
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~g 171 (570)
+|++ +.+....+++++|+|||+|+.....+. .++|+.++.+++++|++. ++++||++||..+++...+
T Consensus 53 ~D~~-------~~~~~~~~~~~~d~vi~~a~~~~~~~~----~~~n~~~~~~~~~~~~~~-~~~~~v~~Ss~~~~~~~~~ 120 (206)
T 1hdo_A 53 GDVL-------QAADVDKTVAGQDAVIVLLGTRNDLSP----TTVMSEGARNIVAAMKAH-GVDKVVACTSAFLLWDPTK 120 (206)
T ss_dssp SCTT-------SHHHHHHHHTTCSEEEECCCCTTCCSC----CCHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCTTC
T ss_pred ecCC-------CHHHHHHHHcCCCEEEECccCCCCCCc----cchHHHHHHHHHHHHHHh-CCCeEEEEeeeeeccCccc
Confidence 9999 555566888999999999997654222 248999999999999986 7899999999987764321
Q ss_pred ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccCCcE
Q 008324 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSL 251 (570)
Q Consensus 172 ~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp~ 251 (570)
. + ...+.|..+|..+|.++++ .++++
T Consensus 121 ~----------~------------------------------------------~~~~~y~~~K~~~e~~~~~--~~i~~ 146 (206)
T 1hdo_A 121 V----------P------------------------------------------PRLQAVTDDHIRMHKVLRE--SGLKY 146 (206)
T ss_dssp S----------C------------------------------------------GGGHHHHHHHHHHHHHHHH--TCSEE
T ss_pred c----------c------------------------------------------ccchhHHHHHHHHHHHHHh--CCCCE
Confidence 0 0 0236799999999999976 68999
Q ss_pred EEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEe
Q 008324 252 VIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHV 331 (570)
Q Consensus 252 ~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni 331 (570)
+++||+.++... ..+.... .+.+.+. .++++++|+|++++.++... ...+++|++
T Consensus 147 ~~lrp~~~~~~~---~~~~~~~-----------------~~~~~~~--~~~i~~~Dva~~~~~~~~~~---~~~g~~~~i 201 (206)
T 1hdo_A 147 VAVMPPHIGDQP---LTGAYTV-----------------TLDGRGP--SRVISKHDLGHFMLRCLTTD---EYDGHSTYP 201 (206)
T ss_dssp EEECCSEEECCC---CCSCCEE-----------------ESSSCSS--CSEEEHHHHHHHHHHTTSCS---TTTTCEEEE
T ss_pred EEEeCCcccCCC---CCcceEe-----------------cccCCCC--CCccCHHHHHHHHHHHhcCc---cccccceee
Confidence 999999984321 1111100 0011111 48999999999999887532 123789999
Q ss_pred cCC
Q 008324 332 GSS 334 (570)
Q Consensus 332 ~s~ 334 (570)
+++
T Consensus 202 ~~g 204 (206)
T 1hdo_A 202 SHQ 204 (206)
T ss_dssp ECC
T ss_pred ecc
Confidence 886
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-21 Score=199.94 Aligned_cols=237 Identities=12% Similarity=0.162 Sum_probs=165.2
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHH--HHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAA--LRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~--~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.|+|+|||||||+|+++++.|++.| .+|++++|+.....+. +.+. + + ...++.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~~~~~-~---------~-----------~~~~~~~ 59 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLG---HPTYVLFRPEVVSNIDKVQMLL-Y---------F-----------KQLGAKL 59 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT---CCEEEECCSCCSSCHHHHHHHH-H---------H-----------HTTTCEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC---CcEEEEECCCcccchhHHHHHH-H---------H-----------HhCCeEE
Confidence 5789999999999999999999988 6789999986543221 1111 0 0 0257889
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCC
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~ 169 (570)
+.+|++ +.+.+..+++++|+|||+|+..... .|+.++.+++++|++.+++++||+ |+ +|..
T Consensus 60 ~~~D~~-------d~~~l~~~~~~~d~vi~~a~~~~~~--------~~~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~ 120 (313)
T 1qyd_A 60 IEASLD-------DHQRLVDALKQVDVVISALAGGVLS--------HHILEQLKLVEAIKEAGNIKRFLP-SE---FGMD 120 (313)
T ss_dssp ECCCSS-------CHHHHHHHHTTCSEEEECCCCSSSS--------TTTTTHHHHHHHHHHSCCCSEEEC-SC---CSSC
T ss_pred EeCCCC-------CHHHHHHHHhCCCEEEECCccccch--------hhHHHHHHHHHHHHhcCCCceEEe-cC---CcCC
Confidence 999999 4555668889999999999976432 378899999999999733999986 32 3321
Q ss_pred CcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccCC
Q 008324 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENL 249 (570)
Q Consensus 170 ~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~l 249 (570)
.... +. +.. +..+.| .+|..+|+++++ .++
T Consensus 121 ~~~~-~~------~~~----------------------------------------p~~~~y-~sK~~~e~~~~~--~g~ 150 (313)
T 1qyd_A 121 PDIM-EH------ALQ----------------------------------------PGSITF-IDKRKVRRAIEA--ASI 150 (313)
T ss_dssp TTSC-CC------CCS----------------------------------------STTHHH-HHHHHHHHHHHH--TTC
T ss_pred cccc-cc------CCC----------------------------------------CCcchH-HHHHHHHHHHHh--cCC
Confidence 1110 00 000 113468 999999999986 689
Q ss_pred cEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceE
Q 008324 250 SLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIY 329 (570)
Q Consensus 250 p~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iy 329 (570)
+++++||+.+++.....+..... .....+....++++++...++++++|+|++++.++.... . .+++|
T Consensus 151 ~~~ilrp~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~-~--~~~~~ 218 (313)
T 1qyd_A 151 PYTYVSSNMFAGYFAGSLAQLDG---------HMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQ-T--LNKTM 218 (313)
T ss_dssp CBCEEECCEEHHHHTTTSSCTTC---------CSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGG-G--SSSEE
T ss_pred CeEEEEeceeccccccccccccc---------cccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcc-c--CCceE
Confidence 99999999998853321111100 000112223456778889999999999999998885321 1 24667
Q ss_pred EecC-CCCCcccHHHHHHHHhhhcccC
Q 008324 330 HVGS-SLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 330 ni~s-~~~~pit~~~l~~~i~~~~~~~ 355 (570)
++++ + +++|+.|+++.+.+.+|+.
T Consensus 219 ~~~g~~--~~~s~~e~~~~~~~~~g~~ 243 (313)
T 1qyd_A 219 YIRPPM--NILSQKEVIQIWERLSEQN 243 (313)
T ss_dssp ECCCGG--GEEEHHHHHHHHHHHHTCC
T ss_pred EEeCCC--CccCHHHHHHHHHHhcCCC
Confidence 6654 4 6899999999999999865
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.86 E-value=5.5e-21 Score=194.47 Aligned_cols=234 Identities=14% Similarity=0.155 Sum_probs=160.5
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC-CcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA-DIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~-~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+++|+|||||||||++++++|++.| ++|++++|+. ....+.++.+ .+ ..+. ..++.++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~~~~-~~------~~l~-----------~~~v~~v 60 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAG---NPTYALVRKTITAANPETKEE-LI------DNYQ-----------SLGVILL 60 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHT---CCEEEEECCSCCSSCHHHHHH-HH------HHHH-----------HTTCEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCC---CcEEEEECCCcccCChHHHHH-HH------HHHH-----------hCCCEEE
Confidence 5789999999999999999999998 5678999986 3222201111 00 0000 1568899
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCC
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~ 170 (570)
.+|++ +.+.+..+++++|+|||+|+... +.++.+++++|++.+++++||+ |+ +|...
T Consensus 61 ~~D~~-------d~~~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~ 117 (307)
T 2gas_A 61 EGDIN-------DHETLVKAIKQVDIVICAAGRLL------------IEDQVKIIKAIKEAGNVKKFFP-SE---FGLDV 117 (307)
T ss_dssp ECCTT-------CHHHHHHHHTTCSEEEECSSSSC------------GGGHHHHHHHHHHHCCCSEEEC-SC---CSSCT
T ss_pred EeCCC-------CHHHHHHHHhCCCEEEECCcccc------------cccHHHHHHHHHhcCCceEEee-cc---cccCc
Confidence 99999 45556688899999999999753 4578899999998733999984 32 23211
Q ss_pred cccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccCCc
Q 008324 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLS 250 (570)
Q Consensus 171 g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp 250 (570)
+|. .+.. +..+.| .+|..+|.++++ .+++
T Consensus 118 ---~~~-----~~~~----------------------------------------p~~~~y-~sK~~~e~~~~~--~~i~ 146 (307)
T 2gas_A 118 ---DRH-----DAVE----------------------------------------PVRQVF-EEKASIRRVIEA--EGVP 146 (307)
T ss_dssp ---TSC-----CCCT----------------------------------------THHHHH-HHHHHHHHHHHH--HTCC
T ss_pred ---ccc-----cCCC----------------------------------------cchhHH-HHHHHHHHHHHH--cCCC
Confidence 110 0100 112468 999999999986 5799
Q ss_pred EEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEE
Q 008324 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (570)
Q Consensus 251 ~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn 330 (570)
++++||+.+++.... .+.... .....+....++++++...++++++|+|++++.++.... . .+++|+
T Consensus 147 ~~~lrp~~~~~~~~~---~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~--~~~~~~ 213 (307)
T 2gas_A 147 YTYLCCHAFTGYFLR---NLAQLD-------ATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPN-T--LNKAVH 213 (307)
T ss_dssp BEEEECCEETTTTGG---GTTCTT-------CSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGG-G--TTEEEE
T ss_pred eEEEEcceeeccccc---cccccc-------cccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCcc-c--cCceEE
Confidence 999999998875431 111100 000112223456778889999999999999999885321 1 256666
Q ss_pred ecC-CCCCcccHHHHHHHHhhhcccC
Q 008324 331 VGS-SLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 331 i~s-~~~~pit~~~l~~~i~~~~~~~ 355 (570)
+++ + +++|+.|+++.+.+..|+.
T Consensus 214 ~~~~~--~~~s~~e~~~~~~~~~g~~ 237 (307)
T 2gas_A 214 IRLPK--NYLTQNEVIALWEKKIGKT 237 (307)
T ss_dssp CCCGG--GEEEHHHHHHHHHHHHTSC
T ss_pred EeCCC--CcCCHHHHHHHHHHHhCCC
Confidence 654 4 6899999999999998864
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.86 E-value=7.1e-21 Score=195.13 Aligned_cols=228 Identities=13% Similarity=0.170 Sum_probs=161.3
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC-CcccH--HHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA-DIDSA--ALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~-~~~~~--~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.+|+|+|||||||+|+++++.|++.| .+|++++|+. ..... .+.+. + +. ..++
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~~~~l~-~---------~~-----------~~~v 58 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFS---HPTFIYARPLTPDSTPSSVQLRE-E---------FR-----------SMGV 58 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTT---CCEEEEECCCCTTCCHHHHHHHH-H---------HH-----------HTTC
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCC---CcEEEEECCcccccChHHHHHHH-H---------hh-----------cCCc
Confidence 35789999999999999999999988 6789999986 32211 11111 0 00 2568
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccC-ceEEEEEecceee
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVK-LKVFVHVSTAYVA 166 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~-l~~~V~vSTa~v~ 166 (570)
.++.+|++ +.+.+..+++++|+|||+|+... +.++.+++++|++. + +++||+ | . +
T Consensus 59 ~~v~~D~~-------d~~~l~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~-g~v~~~v~-S-~--~ 114 (321)
T 3c1o_A 59 TIIEGEME-------EHEKMVSVLKQVDIVISALPFPM------------ISSQIHIINAIKAA-GNIKRFLP-S-D--F 114 (321)
T ss_dssp EEEECCTT-------CHHHHHHHHTTCSEEEECCCGGG------------SGGGHHHHHHHHHH-CCCCEEEC-S-C--C
T ss_pred EEEEecCC-------CHHHHHHHHcCCCEEEECCCccc------------hhhHHHHHHHHHHh-CCccEEec-c-c--c
Confidence 89999999 55556688899999999998642 56789999999997 6 999983 3 2 2
Q ss_pred cCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhc
Q 008324 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSK 246 (570)
Q Consensus 167 ~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~ 246 (570)
|... +|. .+.. +..+.| .+|..+|.++++
T Consensus 115 g~~~---~~~-----~~~~----------------------------------------p~~~~y-~sK~~~e~~~~~-- 143 (321)
T 3c1o_A 115 GCEE---DRI-----KPLP----------------------------------------PFESVL-EKKRIIRRAIEA-- 143 (321)
T ss_dssp SSCG---GGC-----CCCH----------------------------------------HHHHHH-HHHHHHHHHHHH--
T ss_pred ccCc---ccc-----ccCC----------------------------------------CcchHH-HHHHHHHHHHHH--
Confidence 3211 111 0100 002469 999999999986
Q ss_pred cCCcEEEEecCceecCCCCCCCccccCccchHHHHH---HHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCC
Q 008324 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFV---ASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQP 323 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~---~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~ 323 (570)
.+++++++||+.+++.... .+.. ....+....++++++...++++++|+|++++.++.....
T Consensus 144 ~~~~~~~lrp~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~-- 208 (321)
T 3c1o_A 144 AALPYTYVSANCFGAYFVN-------------YLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRC-- 208 (321)
T ss_dssp HTCCBEEEECCEEHHHHHH-------------HHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGG--
T ss_pred cCCCeEEEEeceecccccc-------------ccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccc--
Confidence 5799999999998874210 1110 011222335667888899999999999999998863321
Q ss_pred CCCceEEecC-CCCCcccHHHHHHHHhhhcccC
Q 008324 324 SDANIYHVGS-SLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 324 ~~~~iyni~s-~~~~pit~~~l~~~i~~~~~~~ 355 (570)
.+++|++++ + +++|+.|+++.+.+.+|+.
T Consensus 209 -~g~~~~~~g~~--~~~t~~e~~~~~~~~~g~~ 238 (321)
T 3c1o_A 209 -CNRIVIYRPPK--NIISQNELISLWEAKSGLS 238 (321)
T ss_dssp -TTEEEECCCGG--GEEEHHHHHHHHHHHHTSC
T ss_pred -cCeEEEEeCCC--CcccHHHHHHHHHHHcCCc
Confidence 256777764 4 6899999999999999865
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2e-20 Score=187.71 Aligned_cols=240 Identities=16% Similarity=0.152 Sum_probs=167.5
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.++||+|+||||||+||++++++|++.| .+|+++.|+... .+.+.+ +.+. ..++.
T Consensus 13 ~l~~k~vlITGasggiG~~~a~~l~~~G---~~V~~~~r~~~~---~~~~~~-------------~~~~------~~~~~ 67 (278)
T 2bgk_A 13 RLQDKVAIITGGAGGIGETTAKLFVRYG---AKVVIADIADDH---GQKVCN-------------NIGS------PDVIS 67 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHH-------------HHCC------TTTEE
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEcCChhH---HHHHHH-------------HhCC------CCceE
Confidence 3679999999999999999999999998 678888885422 111111 1110 13788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc---------cccHHHHHHHhHHHHHHHHHHHHHc-
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF---------DERYDVAFGINTLGVIHLVNFAKKC- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f---------~~~~~~~~~~Nv~gt~~ll~la~~~- 151 (570)
++.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 68 ~~~~D~~~-------~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 140 (278)
T 2bgk_A 68 FVHCDVTK-------DEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVM 140 (278)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred EEECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99999994 443444443 79999999997532 1456778999999999999988763
Q ss_pred --cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc
Q 008324 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (570)
Q Consensus 152 --~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
.+..++|++||..++.... +...
T Consensus 141 ~~~~~~~iv~isS~~~~~~~~-------------------------------------------------------~~~~ 165 (278)
T 2bgk_A 141 IPAKKGSIVFTASISSFTAGE-------------------------------------------------------GVSH 165 (278)
T ss_dssp GGGTCEEEEEECCGGGTCCCT-------------------------------------------------------TSCH
T ss_pred hhcCCCeEEEEeeccccCCCC-------------------------------------------------------CCCc
Confidence 2567999999986654211 1235
Q ss_pred hHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeee
Q 008324 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (570)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.|+.||+..|.+++.+ ..+++++++||+.|+++......+. .......+..+ .+.....+++
T Consensus 166 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~------~~~~~~~~~~~-------~~~~~~~~~~ 232 (278)
T 2bgk_A 166 VYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGV------DSSRVEELAHQ-------AANLKGTLLR 232 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSC------CHHHHHHHHHH-------TCSSCSCCCC
T ss_pred chHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhccc------chhHHHHhhhc-------ccccccccCC
Confidence 7999999999998765 3589999999999999765322110 01111111111 0111235789
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhh
Q 008324 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVY 351 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~ 351 (570)
++|+|++++.++.... ....+++|++.++ ..+++.++++.+.+.
T Consensus 233 ~~dva~~~~~l~~~~~-~~~~G~~~~v~gg--~~~~~~e~~~~i~~~ 276 (278)
T 2bgk_A 233 AEDVADAVAYLAGDES-KYVSGLNLVIDGG--YTRTNPAFPTALKHG 276 (278)
T ss_dssp HHHHHHHHHHHHSGGG-TTCCSCEEEESTT--GGGCCTHHHHHSCSC
T ss_pred HHHHHHHHHHHcCccc-ccCCCCEEEECCc--ccccCCccchhhhhh
Confidence 9999999998885332 2223789999998 789999999887654
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-20 Score=193.69 Aligned_cols=225 Identities=16% Similarity=0.198 Sum_probs=159.1
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|+|||||||+|+++++.|++.| .+|++++|+..... +.+. + +. ..+++++.+
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g---~~V~~l~R~~~~~~--~~~~-~---------l~-----------~~~v~~v~~ 65 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLG---HPTYVFTRPNSSKT--TLLD-E---------FQ-----------SLGAIIVKG 65 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTT---CCEEEEECTTCSCH--HHHH-H---------HH-----------HTTCEEEEC
T ss_pred CeEEEECCCchHHHHHHHHHHHCC---CcEEEEECCCCchh--hHHH-H---------hh-----------cCCCEEEEe
Confidence 589999999999999999999998 67889999875221 1111 0 00 156889999
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCCcc
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~g~ 172 (570)
|++ +.+.+..+++++|+|||+|+... +.++++++++|++.+++++||+ |+ +|...
T Consensus 66 Dl~-------d~~~l~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~-- 120 (318)
T 2r6j_A 66 ELD-------EHEKLVELMKKVDVVISALAFPQ------------ILDQFKILEAIKVAGNIKRFLP-SD---FGVEE-- 120 (318)
T ss_dssp CTT-------CHHHHHHHHTTCSEEEECCCGGG------------STTHHHHHHHHHHHCCCCEEEC-SC---CSSCT--
T ss_pred cCC-------CHHHHHHHHcCCCEEEECCchhh------------hHHHHHHHHHHHhcCCCCEEEe-ec---cccCc--
Confidence 999 55556688899999999998642 5678999999999733999985 43 23211
Q ss_pred cccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccCCcEE
Q 008324 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLV 252 (570)
Q Consensus 173 i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp~~ 252 (570)
+|. .+..+ ..+.| .+|..+|.++++ .+++++
T Consensus 121 -~~~-----~~~~p----------------------------------------~~~~y-~sK~~~e~~~~~--~~~~~~ 151 (318)
T 2r6j_A 121 -DRI-----NALPP----------------------------------------FEALI-ERKRMIRRAIEE--ANIPYT 151 (318)
T ss_dssp -TTC-----CCCHH----------------------------------------HHHHH-HHHHHHHHHHHH--TTCCBE
T ss_pred -ccc-----cCCCC----------------------------------------cchhH-HHHHHHHHHHHh--cCCCeE
Confidence 110 11000 01458 999999999987 689999
Q ss_pred EEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEec
Q 008324 253 IIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVG 332 (570)
Q Consensus 253 IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~ 332 (570)
++||+.+++... ..++.....+....++++++...++++++|++++++.++.... . .+++|+++
T Consensus 152 ~lr~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~--~~~~~~~~ 215 (318)
T 2r6j_A 152 YVSANCFASYFI-------------NYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPR-A--LNRVVIYR 215 (318)
T ss_dssp EEECCEEHHHHH-------------HHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGG-G--TTEEEECC
T ss_pred EEEcceehhhhh-------------hhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCcc-c--cCeEEEec
Confidence 999998776311 1111111123334567788889999999999999998875321 1 24666665
Q ss_pred -CCCCCcccHHHHHHHHhhhcccC
Q 008324 333 -SSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 333 -s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
++ +.+|+.|+++.+.+.+|+.
T Consensus 216 g~~--~~~s~~e~~~~~~~~~g~~ 237 (318)
T 2r6j_A 216 PST--NIITQLELISRWEKKIGKK 237 (318)
T ss_dssp CGG--GEEEHHHHHHHHHHHHTCC
T ss_pred CCC--CccCHHHHHHHHHHHhCCC
Confidence 44 6899999999999998864
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=5.4e-21 Score=194.61 Aligned_cols=233 Identities=13% Similarity=0.179 Sum_probs=161.2
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcc-cHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID-SAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~-~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.++|+|||||||+|+++++.|++.| ++|++++|+.... .+ ++.+ .+ ..+ ...++.++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~l~R~~~~~~~~-~~~~-~~------~~l-----------~~~~v~~v 61 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLG---HPTFLLVRESTASSNS-EKAQ-LL------ESF-----------KASGANIV 61 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT---CCEEEECCCCCTTTTH-HHHH-HH------HHH-----------HTTTCEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC---CCEEEEECCcccccCH-HHHH-HH------HHH-----------HhCCCEEE
Confidence 5789999999999999999999988 6788999986532 11 1111 00 000 02578899
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCC
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~ 170 (570)
.+|++ +.+.+..+++++|+|||+|+... +.++.+++++|++.+++++||+ |+ +|...
T Consensus 62 ~~D~~-------d~~~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~ 118 (308)
T 1qyc_A 62 HGSID-------DHASLVEAVKNVDVVISTVGSLQ------------IESQVNIIKAIKEVGTVKRFFP-SE---FGNDV 118 (308)
T ss_dssp CCCTT-------CHHHHHHHHHTCSEEEECCCGGG------------SGGGHHHHHHHHHHCCCSEEEC-SC---CSSCT
T ss_pred EeccC-------CHHHHHHHHcCCCEEEECCcchh------------hhhHHHHHHHHHhcCCCceEee-cc---cccCc
Confidence 99999 45555678889999999998642 4578899999999733999984 43 23211
Q ss_pred cccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccCCc
Q 008324 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLS 250 (570)
Q Consensus 171 g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp 250 (570)
+|. .+.. +..+.| .+|..+|+++++ .+++
T Consensus 119 ---~~~-----~~~~----------------------------------------p~~~~y-~sK~~~e~~~~~--~~~~ 147 (308)
T 1qyc_A 119 ---DNV-----HAVE----------------------------------------PAKSVF-EVKAKVRRAIEA--EGIP 147 (308)
T ss_dssp ---TSC-----CCCT----------------------------------------THHHHH-HHHHHHHHHHHH--HTCC
T ss_pred ---ccc-----ccCC----------------------------------------cchhHH-HHHHHHHHHHHh--cCCC
Confidence 111 1110 112468 999999999987 5799
Q ss_pred EEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEE
Q 008324 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (570)
Q Consensus 251 ~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn 330 (570)
++++||+.+++.....+..... ....+....++++++...++++++|+|++++.++.... ..+++|+
T Consensus 148 ~~~~r~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~---~~~~~~~ 214 (308)
T 1qyc_A 148 YTYVSSNCFAGYFLRSLAQAGL----------TAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPR---TLNKTLY 214 (308)
T ss_dssp BEEEECCEEHHHHTTTTTCTTC----------SSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGG---GTTEEEE
T ss_pred eEEEEeceeccccccccccccc----------cCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCcc---ccCeEEE
Confidence 9999999998854321111000 00122233567888899999999999999998775321 1256777
Q ss_pred ecC-CCCCcccHHHHHHHHhhhcccC
Q 008324 331 VGS-SLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 331 i~s-~~~~pit~~~l~~~i~~~~~~~ 355 (570)
+++ + +++|+.|+++.+.+.+|+.
T Consensus 215 ~~g~~--~~~s~~e~~~~~~~~~g~~ 238 (308)
T 1qyc_A 215 LRLPA--NTLSLNELVALWEKKIDKT 238 (308)
T ss_dssp CCCGG--GEEEHHHHHHHHHHHTTSC
T ss_pred EeCCC--CccCHHHHHHHHHHHhCCC
Confidence 754 4 6899999999999998865
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.84 E-value=5.3e-21 Score=188.95 Aligned_cols=237 Identities=12% Similarity=0.059 Sum_probs=153.7
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+|||||||||++++++|++.| .+|+++.|+..... . .+.+
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g---~~V~~~~r~~~~~~-------------------------------~---~~~~ 44 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAG---HTVIGIDRGQADIE-------------------------------A---DLST 44 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSSSSEE-------------------------------C---CTTS
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCC---CEEEEEeCChhHcc-------------------------------c---cccC
Confidence 589999999999999999999998 67899999754320 1 1467
Q ss_pred cCCCCCCCCCchhhHHHHhC----CccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHc---cCceEEEEEeccee
Q 008324 93 DISSEDLGLKDSNLKEELWN----ELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHVSTAYV 165 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~----~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~---~~l~~~V~vSTa~v 165 (570)
|++ +.+..+.+++ ++|+|||+||.....++++..+++|+.|+.++++++.+. .+.+++|++||..+
T Consensus 45 D~~-------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 117 (255)
T 2dkn_A 45 PGG-------RETAVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAA 117 (255)
T ss_dssp HHH-------HHHHHHHHHHHHTTCCSEEEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred Ccc-------cHHHHHHHHHHcCCCccEEEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccc
Confidence 777 4444445554 799999999987645678889999999999999988763 24589999999988
Q ss_pred ecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008324 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (570)
Q Consensus 166 ~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (570)
++..... . ...+... ..+++........ .....+.|+.||+.+|.+++.+
T Consensus 118 ~~~~~~~---~--------~~~~~~~------------~~~~~~~~~~~~~-------~~~~~~~Y~~sK~a~~~~~~~~ 167 (255)
T 2dkn_A 118 TQPGAAE---L--------PMVEAML------------AGDEARAIELAEQ-------QGQTHLAYAGSKYAVTCLARRN 167 (255)
T ss_dssp GSTTGGG---C--------HHHHHHH------------HTCHHHHHHHHHH-------HCCHHHHHHHHHHHHHHHHHHT
T ss_pred ccccccc---c--------chhhhhc------------ccchhhhhhhccc-------cCCcchhHHHHHHHHHHHHHHH
Confidence 7643210 0 0000000 0011100000000 0022468999999999998876
Q ss_pred c-----cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhh
Q 008324 246 K-----ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHA 320 (570)
Q Consensus 246 ~-----~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~ 320 (570)
. .+++++++||+.|+|+.... +..... .... .. .+. + ...++++++|+|++++.++....
T Consensus 168 ~~~~~~~gi~v~~v~pg~v~~~~~~~---~~~~~~-~~~~----~~----~~~--~-~~~~~~~~~dva~~~~~l~~~~~ 232 (255)
T 2dkn_A 168 VVDWAGRGVRLNVVAPGAVETPLLQA---SKADPR-YGES----TR----RFV--A-PLGRGSEPREVAEAIAFLLGPQA 232 (255)
T ss_dssp HHHHHHTTCEEEEEEECCBCSHHHHH---HHHCTT-THHH----HH----SCC--C-TTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHhhcCcEEEEEcCCcccchhhhh---cccchh-hHHH----HH----HHH--H-HhcCCCCHHHHHHHHHHHhCCCc
Confidence 2 58999999999999864311 000000 0000 00 000 1 23468999999999999886432
Q ss_pred CCCCCCceEEecCCCCCcccH
Q 008324 321 KQPSDANIYHVGSSLRNPVTL 341 (570)
Q Consensus 321 ~~~~~~~iyni~s~~~~pit~ 341 (570)
. ...+++|+++++ .++++
T Consensus 233 ~-~~~G~~~~v~gg--~~~~~ 250 (255)
T 2dkn_A 233 S-FIHGSVLFVDGG--MDALM 250 (255)
T ss_dssp T-TCCSCEEEESTT--HHHHH
T ss_pred c-cceeeEEEecCC--eEeee
Confidence 1 223789999988 55544
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.84 E-value=9.9e-20 Score=183.36 Aligned_cols=240 Identities=13% Similarity=0.080 Sum_probs=156.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
..+|+|+||||+|+||++++++|++.| .+|+++.|+..... .+. ++ ...++.+
T Consensus 3 ~~~k~vlVTGas~gIG~~~a~~l~~~G---~~V~~~~r~~~~~~---~~~-------------~~--------~~~~~~~ 55 (281)
T 3m1a_A 3 ESAKVWLVTGASSGFGRAIAEAAVAAG---DTVIGTARRTEALD---DLV-------------AA--------YPDRAEA 55 (281)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSGGGGH---HHH-------------HH--------CTTTEEE
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHH---HHH-------------Hh--------ccCCceE
Confidence 368999999999999999999999999 68899999754321 111 11 1357889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHH----HHHHHHHHc
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVI----HLVNFAKKC 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~----~ll~la~~~ 151 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+. .++..+++.
T Consensus 56 ~~~Dv~~-------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 128 (281)
T 3m1a_A 56 ISLDVTD-------GERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRER 128 (281)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeeCCC-------HHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999994 443444443 78999999997532 2456778999999954 445544553
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+..++|++||....... ...+.|
T Consensus 129 -~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y 151 (281)
T 3m1a_A 129 -GSGSVVNISSFGGQLSF--------------------------------------------------------AGFSAY 151 (281)
T ss_dssp -TCEEEEEECCGGGTCCC--------------------------------------------------------TTCHHH
T ss_pred -CCCEEEEEcCccccCCC--------------------------------------------------------CCchHH
Confidence 67899999997543211 224679
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCcc-ccCccchHHHHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGW-VEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw-~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
+.||+..|.+++.+ ..+++++++||+.|.++...+.... ................ .........++++
T Consensus 152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 225 (281)
T 3m1a_A 152 SATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQ------LVQGSDGSQPGDP 225 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHH------HHHC-----CBCH
T ss_pred HHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHH------HHhhccCCCCCCH
Confidence 99999999998765 2589999999999988765432221 1111111111100000 0011223456789
Q ss_pred HHHHHHHHHHHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhc
Q 008324 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYF 352 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~ 352 (570)
+|+|++++.++... . .+..|+++++ ......+....+.+.+
T Consensus 226 ~dva~a~~~~~~~~--~--~~~~~~l~s~--~~~~i~g~~~~i~~~~ 266 (281)
T 3m1a_A 226 AKAAAAIRLALDTE--K--TPLRLALGGD--AVDFLTGHLDSVRAEL 266 (281)
T ss_dssp HHHHHHHHHHHHSS--S--CCSEEEESHH--HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--C--CCeEEecCch--HHHHHHHHHHHHHHHH
Confidence 99999999998632 1 2568999887 4555555555555543
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.3e-19 Score=179.42 Aligned_cols=224 Identities=15% Similarity=0.133 Sum_probs=154.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+... .+.+. +.++.. ..++.+
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~G---~~V~~~~r~~~~---~~~~~---------~~~~~~---------~~~~~~ 64 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATAG---ASVVVSDINADA---ANHVV---------DEIQQL---------GGQAFA 64 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTT---CEEEEEESCHHH---HHHHH---------HHHHHT---------TCCEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCC---CEEEEEcCCHHH---HHHHH---------HHHHHh---------CCceEE
Confidence 689999999999999999999999998 678899886422 11111 111111 257888
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc------cccHHHHHHHhHHHHHHHHHHHHHc---cC
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f------~~~~~~~~~~Nv~gt~~ll~la~~~---~~ 153 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+
T Consensus 65 ~~~D~~~-------~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~ 137 (255)
T 1fmc_A 65 CRCDITS-------EQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG 137 (255)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EEcCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 9999994 443444443 79999999997543 2346778999999999999988531 25
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||...+... .....|+.
T Consensus 138 ~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~ 161 (255)
T 1fmc_A 138 GGVILTITSMAAENKN--------------------------------------------------------INMTSYAS 161 (255)
T ss_dssp CEEEEEECCGGGTCCC--------------------------------------------------------TTCHHHHH
T ss_pred CcEEEEEcchhhcCCC--------------------------------------------------------CCCcccHH
Confidence 6899999998654321 12357999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHH
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..|.+++.+ ..+++++++||+.|+++..... . ..........+. ....+++++|+
T Consensus 162 sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~---~-----~~~~~~~~~~~~---------~~~~~~~~~dv 224 (255)
T 1fmc_A 162 SKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV---I-----TPEIEQKMLQHT---------PIRRLGQPQDI 224 (255)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT---C-----CHHHHHHHHHTC---------SSCSCBCHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhc---c-----ChHHHHHHHhcC---------CcccCCCHHHH
Confidence 999999998765 3489999999999998643210 0 011222222221 11346789999
Q ss_pred HHHHHHHHHHhhCCCCCCceEEecCCCCCccc
Q 008324 309 VNAMIVAMVAHAKQPSDANIYHVGSSLRNPVT 340 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~~~~pit 340 (570)
|++++.++..... ...+++|+++++ ...|
T Consensus 225 a~~~~~l~~~~~~-~~~G~~~~v~gg--~~~s 253 (255)
T 1fmc_A 225 ANAALFLCSPAAS-WVSGQILTVSGG--GVQE 253 (255)
T ss_dssp HHHHHHHHSGGGT-TCCSCEEEESTT--SCCC
T ss_pred HHHHHHHhCCccc-cCCCcEEEECCc--eecc
Confidence 9999988753222 123789999988 5544
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.7e-19 Score=177.41 Aligned_cols=217 Identities=18% Similarity=0.180 Sum_probs=151.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+... .+.+. ++ ..++.+
T Consensus 5 ~~~~~vlVTGasggiG~~~a~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~---------~~~~~~ 56 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDTVKALHASG---AKVVAVTRTNSD---LVSLA-------------KE---------CPGIEP 56 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HH---------STTCEE
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------Hh---------ccCCCc
Confidence 678999999999999999999999998 678888886421 11111 11 134667
Q ss_pred EeccCCCCCCCCCchhhHHHHhC---CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---cC-ce
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN---ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK-LK 155 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~---~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~-l~ 155 (570)
+.+|++ +.+..+.+++ .+|+|||+||.... .+.++..+++|+.|+.++++++.+. .+ ..
T Consensus 57 ~~~D~~-------~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~ 129 (244)
T 1cyd_A 57 VCVDLG-------DWDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPG 129 (244)
T ss_dssp EECCTT-------CHHHHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE
T ss_pred EEecCC-------CHHHHHHHHHHcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCe
Confidence 799999 4444556655 48999999997542 2346678999999999999988653 13 57
Q ss_pred EEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHH
Q 008324 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (570)
Q Consensus 156 ~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
++|++||..++... +....|+.||
T Consensus 130 ~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK 153 (244)
T 1cyd_A 130 SIVNVSSMVAHVTF--------------------------------------------------------PNLITYSSTK 153 (244)
T ss_dssp EEEEECCGGGTSCC--------------------------------------------------------TTBHHHHHHH
T ss_pred EEEEEcchhhcCCC--------------------------------------------------------CCcchhHHHH
Confidence 99999998654321 1135799999
Q ss_pred HHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHH
Q 008324 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (570)
Q Consensus 236 ~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ 310 (570)
+..|.+++.+ ..+++++++||+.|+++..... + ....++..+..+. ...++++++|+|+
T Consensus 154 ~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~--~-----~~~~~~~~~~~~~---------~~~~~~~~~dva~ 217 (244)
T 1cyd_A 154 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKV--S-----ADPEFARKLKERH---------PLRKFAEVEDVVN 217 (244)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHH--T-----CCHHHHHHHHHHS---------TTSSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEecCcccCcccccc--c-----cCHHHHHHHHhcC---------CccCCCCHHHHHH
Confidence 9999998765 2579999999999998643210 0 0011112222211 1247899999999
Q ss_pred HHHHHHHHhhCCCCCCceEEecCC
Q 008324 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++.++..... ...++++++.++
T Consensus 218 ~~~~l~~~~~~-~~~G~~~~v~gG 240 (244)
T 1cyd_A 218 SILFLLSDRSA-STSGGGILVDAG 240 (244)
T ss_dssp HHHHHHSGGGT-TCCSSEEEESTT
T ss_pred HHHHHhCchhh-cccCCEEEECCC
Confidence 99998864322 223678888776
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=4.9e-19 Score=174.26 Aligned_cols=217 Identities=18% Similarity=0.230 Sum_probs=150.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+... .+.+. ++ ..++.+
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~---------~~~~~~ 56 (244)
T 3d3w_A 5 LAGRRVLVTGAGKGIGRGTVQALHATG---ARVVAVSRTQAD---LDSLV-------------RE---------CPGIEP 56 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HH---------STTCEE
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------HH---------cCCCCE
Confidence 679999999999999999999999998 678888886421 11111 11 134567
Q ss_pred EeccCCCCCCCCCchhhHHHHhC---CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---cC-ce
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN---ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK-LK 155 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~---~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~-l~ 155 (570)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++.+. .+ ..
T Consensus 57 ~~~D~~-------~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~ 129 (244)
T 3d3w_A 57 VCVDLG-------DWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPG 129 (244)
T ss_dssp EECCTT-------CHHHHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE
T ss_pred EEEeCC-------CHHHHHHHHHHcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCc
Confidence 799999 4444556654 58999999997542 1346778999999999999888653 13 67
Q ss_pred EEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHH
Q 008324 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (570)
Q Consensus 156 ~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
++|++||...+... +....|+.||
T Consensus 130 ~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK 153 (244)
T 3d3w_A 130 AIVNVSSQCSQRAV--------------------------------------------------------TNHSVYCSTK 153 (244)
T ss_dssp EEEEECCGGGTSCC--------------------------------------------------------TTBHHHHHHH
T ss_pred EEEEeCchhhccCC--------------------------------------------------------CCCchHHHHH
Confidence 89999997644321 1235799999
Q ss_pred HHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHH
Q 008324 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (570)
Q Consensus 236 ~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ 310 (570)
+..|.+++.+ ..+++++++||+.|+++.... .+.+. ........+. ...++++++|+|+
T Consensus 154 ~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~--~~~~~-----~~~~~~~~~~---------~~~~~~~~~dva~ 217 (244)
T 3d3w_A 154 GALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQA--TWSDP-----HKAKTMLNRI---------PLGKFAEVEHVVN 217 (244)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHH--HSCST-----THHHHHHHTC---------TTCSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEEeccccccchhh--hccCh-----HHHHHHHhhC---------CCCCCcCHHHHHH
Confidence 9999998765 247999999999999865321 01000 0111111111 1236789999999
Q ss_pred HHHHHHHHhhCCCCCCceEEecCC
Q 008324 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++.++..... ...+++|++.++
T Consensus 218 ~~~~l~~~~~~-~~~G~~~~v~gG 240 (244)
T 3d3w_A 218 AILFLLSDRSG-MTTGSTLPVEGG 240 (244)
T ss_dssp HHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHcCcccc-CCCCCEEEECCC
Confidence 99998863322 223789999887
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=3.5e-19 Score=172.70 Aligned_cols=202 Identities=15% Similarity=0.195 Sum_probs=140.6
Q ss_pred CEEEEECCcchhHHHHHHHHH-HhCCCccEEEEEEcCCC-cccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 13 KTILVSGVTGFVAKVFIEKIL-RVQPNVKKLYLFVRAAD-IDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl-~~~~~V~~V~~lvR~~~-~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
|+|+||||||+||++++++|+ +.| .+|+++.|+.. .... +. . ...++.++
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g---~~V~~~~r~~~~~~~~---~~-------------~---------~~~~~~~~ 57 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTD---MHITLYGRQLKTRIPP---EI-------------I---------DHERVTVI 57 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCC---CEEEEEESSHHHHSCH---HH-------------H---------TSTTEEEE
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCC---ceEEEEecCccccchh---hc-------------c---------CCCceEEE
Confidence 579999999999999999999 777 68899999753 2211 10 0 13678999
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCC
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~ 170 (570)
.+|++ +.+..+.+++++|+|||+||.. |+. ++++++.+++. ++++||++||..+++...
T Consensus 58 ~~D~~-------d~~~~~~~~~~~d~vv~~ag~~------------n~~-~~~~~~~~~~~-~~~~iv~iSs~~~~~~~~ 116 (221)
T 3r6d_A 58 EGSFQ-------NPGXLEQAVTNAEVVFVGAMES------------GSD-MASIVKALSRX-NIRRVIGVSMAGLSGEFP 116 (221)
T ss_dssp ECCTT-------CHHHHHHHHTTCSEEEESCCCC------------HHH-HHHHHHHHHHT-TCCEEEEEEETTTTSCSC
T ss_pred ECCCC-------CHHHHHHHHcCCCEEEEcCCCC------------Chh-HHHHHHHHHhc-CCCeEEEEeeceecCCCC
Confidence 99999 5555668889999999999863 444 99999999986 788999999988766432
Q ss_pred cccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccCCc
Q 008324 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLS 250 (570)
Q Consensus 171 g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp 250 (570)
+...+ .. . ....+.|..+|..+|.++++ .+++
T Consensus 117 ~~~~~----------------~~-----------------~-------------~~~~~~y~~~K~~~e~~~~~--~~i~ 148 (221)
T 3r6d_A 117 VALEK----------------WT-----------------F-------------DNLPISYVQGERQARNVLRE--SNLN 148 (221)
T ss_dssp HHHHH----------------HH-----------------H-------------HTSCHHHHHHHHHHHHHHHH--SCSE
T ss_pred ccccc----------------cc-----------------c-------------cccccHHHHHHHHHHHHHHh--CCCC
Confidence 10000 00 0 02234899999999999987 6899
Q ss_pred EEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHH--HHhhCCCCCCce
Q 008324 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM--VAHAKQPSDANI 328 (570)
Q Consensus 251 ~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~--~~~~~~~~~~~i 328 (570)
++++||+.|+++... + ..............+++.+|+|++++.++ .+... ..++.
T Consensus 149 ~~~vrpg~v~~~~~~---~------------------~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~--~~~~~ 205 (221)
T 3r6d_A 149 YTILRLTWLYNDPEX---T------------------DYELIPEGAQFNDAQVSREAVVKAIFDILHAADETP--FHRTS 205 (221)
T ss_dssp EEEEEECEEECCTTC---C------------------CCEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGG--GTTEE
T ss_pred EEEEechhhcCCCCC---c------------------ceeeccCCccCCCceeeHHHHHHHHHHHHHhcChhh--hhcce
Confidence 999999999986211 1 01111111111123799999999999988 53221 12456
Q ss_pred EEecCC
Q 008324 329 YHVGSS 334 (570)
Q Consensus 329 yni~s~ 334 (570)
+.++++
T Consensus 206 ~~i~~~ 211 (221)
T 3r6d_A 206 IGVGEP 211 (221)
T ss_dssp EEEECT
T ss_pred eeecCC
Confidence 666654
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-19 Score=180.58 Aligned_cols=225 Identities=20% Similarity=0.249 Sum_probs=152.9
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
-++||+|+||||+|+||++++++|++.| .+|+++.|+.... +.+.+ +. ..++.
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~-------------~~--------~~~~~ 57 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREG---ATVAIADIDIERA---RQAAA-------------EI--------GPAAY 57 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHH-------------HH--------CTTEE
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHH-------------Hh--------CCCce
Confidence 4679999999999999999999999999 6788888864221 11111 11 25678
Q ss_pred EEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc-c-
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-V- 152 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~-~- 152 (570)
++.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 58 ~~~~D~~~-------~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 130 (259)
T 4e6p_A 58 AVQMDVTR-------QDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIA 130 (259)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEEeeCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 99999995 443444444 79999999997542 2456778899999999999988653 1
Q ss_pred --CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 153 --KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 153 --~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.-.++|++||...+... +....
T Consensus 131 ~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 154 (259)
T 4e6p_A 131 QGRGGKIINMASQAGRRGE--------------------------------------------------------ALVAI 154 (259)
T ss_dssp HTSCEEEEEECCGGGTSCC--------------------------------------------------------TTBHH
T ss_pred cCCCeEEEEECChhhccCC--------------------------------------------------------CCChH
Confidence 14589999997543211 12357
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHh---cCCceeeecCCCeeeee
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASA---QGNLRCLVGETKVIMDV 302 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~---~G~~~~~~~~~~~~~d~ 302 (570)
|+.||+..|.+.+.+ ..++++.+++|+.|.++..+.. ..++.... .+.......+......+
T Consensus 155 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~p~~r~ 224 (259)
T 4e6p_A 155 YCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGV----------DALFARYENRPRGEKKRLVGEAVPFGRM 224 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHH----------HHHHHHHHTCCTTHHHHHHHHHSTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhh----------hhhhhhhccCChHHHHHHHhccCCCCCC
Confidence 999999999998765 3489999999999998643211 00111110 00000111112233567
Q ss_pred eehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.+++|+|++++.++..... .-.+++|++.+|
T Consensus 225 ~~~~dva~~v~~L~s~~~~-~itG~~i~vdgG 255 (259)
T 4e6p_A 225 GTAEDLTGMAIFLASAESD-YIVSQTYNVDGG 255 (259)
T ss_dssp BCTHHHHHHHHHTTSGGGT-TCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHhCCccC-CCCCCEEEECcC
Confidence 8999999999887753322 223789999988
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-18 Score=172.81 Aligned_cols=223 Identities=15% Similarity=0.143 Sum_probs=152.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|++.| .+|+++.|+.... +.+. +.++.. ..++.+
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~---------~~l~~~---------~~~~~~ 66 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAG---ARVIIADLDEAMA---TKAV---------EDLRME---------GHDVSS 66 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHH---------HHHHHT---------TCCEEE
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHH---------HHHHhc---------CCceEE
Confidence 679999999999999999999999998 6789998864321 1111 111111 257889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHHc---
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKKC--- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~----f----~~~~~~~~~~Nv~gt~~ll~la~~~--- 151 (570)
+.+|+++ .+..+.+++ ++|+|||+||... + .+.++..+++|+.|+.++++++...
T Consensus 67 ~~~D~~~-------~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 139 (260)
T 3awd_A 67 VVMDVTN-------TESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLE 139 (260)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhh
Confidence 9999995 333334443 7999999999654 1 1335677999999999999988652
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||.+......+ .+...|
T Consensus 140 ~~~~~iv~~sS~~~~~~~~~------------------------------------------------------~~~~~Y 165 (260)
T 3awd_A 140 QKQGVIVAIGSMSGLIVNRP------------------------------------------------------QQQAAY 165 (260)
T ss_dssp HTCEEEEEECCGGGTSCCSS------------------------------------------------------SCCHHH
T ss_pred cCCCEEEEEecchhcccCCC------------------------------------------------------CCcccc
Confidence 25679999999864422110 112679
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..|.+++.+ ..+++++++||+.|+++...+ +... ......+..+.. ...+++++
T Consensus 166 ~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~------~~~~-~~~~~~~~~~~~---------~~~~~~~~ 229 (260)
T 3awd_A 166 NASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRF------GMEK-PELYDAWIAGTP---------MGRVGQPD 229 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHH------HHTC-HHHHHHHHHTCT---------TSSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhc------ccCC-hHHHHHHHhcCC---------cCCCCCHH
Confidence 99999999998765 258999999999999875420 0000 111222222211 12468899
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++.... ....+++|++.++
T Consensus 230 dva~~~~~l~~~~~-~~~~G~~~~v~gg 256 (260)
T 3awd_A 230 EVASVVQFLASDAA-SLMTGAIVNVDAG 256 (260)
T ss_dssp HHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHHhCchh-ccCCCcEEEECCc
Confidence 99999998875332 2223789999887
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.81 E-value=8e-19 Score=172.15 Aligned_cols=202 Identities=14% Similarity=0.159 Sum_probs=135.1
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.|+||||||||+||++++++|++.|. .+|+++.|+...... ....++.++.
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~--~~V~~~~R~~~~~~~---------------------------~~~~~~~~~~ 73 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQT--IKQTLFARQPAKIHK---------------------------PYPTNSQIIM 73 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTT--EEEEEEESSGGGSCS---------------------------SCCTTEEEEE
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCC--ceEEEEEcChhhhcc---------------------------cccCCcEEEE
Confidence 57899999999999999999999873 478899997643210 1135789999
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCCc
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~g 171 (570)
+|++ +.+..+.+++++|+|||+|+...+ . .+++++++++++. ++++||++||..+++...+
T Consensus 74 ~Dl~-------d~~~~~~~~~~~D~vv~~a~~~~~----~-------~~~~~~~~~~~~~-~~~~iV~iSS~~~~~~~~~ 134 (236)
T 3qvo_A 74 GDVL-------NHAALKQAMQGQDIVYANLTGEDL----D-------IQANSVIAAMKAC-DVKRLIFVLSLGIYDEVPG 134 (236)
T ss_dssp CCTT-------CHHHHHHHHTTCSEEEEECCSTTH----H-------HHHHHHHHHHHHT-TCCEEEEECCCCC------
T ss_pred ecCC-------CHHHHHHHhcCCCEEEEcCCCCch----h-------HHHHHHHHHHHHc-CCCEEEEEecceecCCCCc
Confidence 9999 555567888999999999986322 1 3577899999986 7899999999988875432
Q ss_pred ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccCCcE
Q 008324 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSL 251 (570)
Q Consensus 172 ~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp~ 251 (570)
...+ +. + ..+..+...+..+|..+.. .++++
T Consensus 135 ~~~~--~~--------~-------------------------------------~~~~~~~~~~~~~~~~l~~--~gi~~ 165 (236)
T 3qvo_A 135 KFVE--WN--------N-------------------------------------AVIGEPLKPFRRAADAIEA--SGLEY 165 (236)
T ss_dssp ---------------------------------------------------------CGGGHHHHHHHHHHHT--SCSEE
T ss_pred cccc--ch--------h-------------------------------------hcccchHHHHHHHHHHHHH--CCCCE
Confidence 1000 00 0 0111233344555666654 68999
Q ss_pred EEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEe
Q 008324 252 VIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHV 331 (570)
Q Consensus 252 ~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni 331 (570)
+++||+.++++..... ............+++++|+|++++.++..... ..+++|++
T Consensus 166 ~~vrPg~i~~~~~~~~----------------------~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~--~~g~~~~i 221 (236)
T 3qvo_A 166 TILRPAWLTDEDIIDY----------------------ELTSRNEPFKGTIVSRKSVAALITDIIDKPEK--HIGENIGI 221 (236)
T ss_dssp EEEEECEEECCSCCCC----------------------EEECTTSCCSCSEEEHHHHHHHHHHHHHSTTT--TTTEEEEE
T ss_pred EEEeCCcccCCCCcce----------------------EEeccCCCCCCcEECHHHHHHHHHHHHcCccc--ccCeeEEe
Confidence 9999999998643211 01111111123579999999999999874321 23789999
Q ss_pred cCC
Q 008324 332 GSS 334 (570)
Q Consensus 332 ~s~ 334 (570)
+++
T Consensus 222 ~~~ 224 (236)
T 3qvo_A 222 NQP 224 (236)
T ss_dssp ECS
T ss_pred cCC
Confidence 987
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=3.2e-19 Score=181.33 Aligned_cols=240 Identities=12% Similarity=0.067 Sum_probs=161.2
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.++||+|+||||||+||++++++|++.| .+|+++.|+.... +.+. +.+++.. ..++.
T Consensus 23 ~l~~k~vlITGasggiG~~la~~L~~~G---~~V~~~~r~~~~~---~~~~---------~~l~~~~--------~~~~~ 79 (302)
T 1w6u_A 23 SFQGKVAFITGGGTGLGKGMTTLLSSLG---AQCVIASRKMDVL---KATA---------EQISSQT--------GNKVH 79 (302)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHH---------HHHHHHH--------SSCEE
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHH---------HHHHHhc--------CCceE
Confidence 4688999999999999999999999998 6788898864221 1111 1122111 25788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~--- 151 (570)
++.+|+++ .+..+.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 80 ~~~~Dl~~-------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~ 152 (302)
T 1w6u_A 80 AIQCDVRD-------PDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIK 152 (302)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 99999994 333334433 56999999996432 2446778999999999998887642
Q ss_pred -cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+..++|++||.+.+... +....
T Consensus 153 ~~~~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 176 (302)
T 1w6u_A 153 AQKGAAFLSITTIYAETGS--------------------------------------------------------GFVVP 176 (302)
T ss_dssp TTCCEEEEEECCTHHHHCC--------------------------------------------------------TTCHH
T ss_pred hcCCCEEEEEcccccccCC--------------------------------------------------------CCcch
Confidence 245799999998654321 12357
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCC-CCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeee
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYK-EPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~-ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
|+.||+..|.+++.+ ..+++++++||+.|.++.. ... ... . ........+. ....+++
T Consensus 177 Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~--~--~~~~~~~~~~---------p~~~~~~ 240 (302)
T 1w6u_A 177 SASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRL---DPT--G--TFEKEMIGRI---------PCGRLGT 240 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------C---CTT--S--HHHHHHHTTC---------TTSSCBC
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhc---ccc--h--hhHHHHHhcC---------CcCCCCC
Confidence 999999999998765 2589999999999988621 111 000 0 0011112211 1124678
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcc
Q 008324 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFT 353 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~ 353 (570)
++|+|++++.++.... ..-.+++|++.++ ..+++.++++.+.+..+
T Consensus 241 ~~dva~~~~~l~~~~~-~~~~G~~~~v~gg--~~~~~~~~~~~~~~~~g 286 (302)
T 1w6u_A 241 VEELANLAAFLCSDYA-SWINGAVIKFDGG--EEVLISGEFNDLRKVTK 286 (302)
T ss_dssp HHHHHHHHHHHTSGGG-TTCCSCEEEESTT--HHHHHHSTTGGGGGCCH
T ss_pred HHHHHHHHHHHcCCcc-cccCCCEEEECCC--eeeccCCccccchhhcc
Confidence 9999999998875322 2223789999998 67777777766665543
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.6e-18 Score=174.28 Aligned_cols=246 Identities=14% Similarity=0.099 Sum_probs=151.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+... .+.+.++ +..... ...++.+
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------~~~~~~------~~~~~~~ 62 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREG---AKVTITGRHAER---LEETRQQ---------ILAAGV------SEQNVNS 62 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHHTTC------CGGGEEE
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHhccc------CCCceeE
Confidence 578999999999999999999999998 678899886422 1111111 110000 0246889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCC-----------ccccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITK-----------FDERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~-----------f~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
+.+|+++ .+..+.+++ ++|+|||+||... ..+.++..+++|+.|+.++++.+...
T Consensus 63 ~~~D~~~-------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 135 (278)
T 1spx_A 63 VVADVTT-------DAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPH 135 (278)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred EecccCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 9999994 443445444 7999999999753 22346677999999999999988753
Q ss_pred ---cCceEEEEEeccee-ecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCC
Q 008324 152 ---VKLKVFVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (570)
Q Consensus 152 ---~~l~~~V~vSTa~v-~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 227 (570)
.+ .++|++||... +... +.
T Consensus 136 ~~~~~-g~iv~isS~~~~~~~~--------------------------------------------------------~~ 158 (278)
T 1spx_A 136 LSSTK-GEIVNISSIASGLHAT--------------------------------------------------------PD 158 (278)
T ss_dssp HHHHT-CEEEEECCTTSSSSCC--------------------------------------------------------TT
T ss_pred HhhcC-CeEEEEecccccccCC--------------------------------------------------------CC
Confidence 13 79999999754 3211 12
Q ss_pred CchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeee
Q 008324 228 PNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDV 302 (570)
Q Consensus 228 ~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
...|+.||+..|.+.+.. ..+++++++||+.|.++.......-................. . + ...+
T Consensus 159 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~----~---p--~~~~ 229 (278)
T 1spx_A 159 FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKEC----V---P--AGVM 229 (278)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHH----C---T--TSSC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhc----C---C--CcCC
Confidence 357999999999998765 358999999999998875321100000000000001111110 0 0 1246
Q ss_pred eehHHHHHHHHHHHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhh
Q 008324 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVY 351 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~ 351 (570)
++++|+|++++.++.......-.+++|++.++ ..+++.++++.+.+.
T Consensus 230 ~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG--~~~~~~~~~~~~~~~ 276 (278)
T 1spx_A 230 GQPQDIAEVIAFLADRKTSSYIIGHQLVVDGG--SSLIMGLHCQDFAKL 276 (278)
T ss_dssp BCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT--GGGC-----------
T ss_pred CCHHHHHHHHHHHcCccccCcccCcEEEECCC--cccccCcccccHHHH
Confidence 88999999999887543221013789999998 789999998887654
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=5.3e-19 Score=174.19 Aligned_cols=220 Identities=16% Similarity=0.146 Sum_probs=149.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+... .+.+.++ +.+.. ..++.+
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------~~~~~--------~~~~~~ 61 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAG---STVIITGTSGER---AKAVAEE---------IANKY--------GVKAHG 61 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSHHH---HHHHHHH---------HHHHH--------CCCEEE
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCChHH---HHHHHHH---------HHhhc--------CCceEE
Confidence 578999999999999999999999998 678999886422 1111111 11111 257889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .
T Consensus 62 ~~~D~~~-------~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 134 (248)
T 2pnf_A 62 VEMNLLS-------EESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQ 134 (248)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHH
T ss_pred EEccCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 9999994 444445544 79999999997642 2346678999999997777655321 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... +....|+
T Consensus 135 ~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~ 158 (248)
T 2pnf_A 135 RWGRIVNISSVVGFTGN--------------------------------------------------------VGQVNYS 158 (248)
T ss_dssp TCEEEEEECCHHHHHCC--------------------------------------------------------TTCHHHH
T ss_pred CCcEEEEEccHHhcCCC--------------------------------------------------------CCCchHH
Confidence 67899999997543211 1135799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..|.+.+.+ ..+++++++||+.|.++.....+ .........+. ....+++++|
T Consensus 159 ~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~~~---------~~~~~~~~~d 220 (248)
T 2pnf_A 159 TTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLS---------EEIKQKYKEQI---------PLGRFGSPEE 220 (248)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC---------HHHHHHHHHTC---------TTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhcc---------HHHHHHHHhcC---------CCCCccCHHH
Confidence 9999999988754 34799999999999886542111 11111111111 1124789999
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++.++.... ....+++|++.++
T Consensus 221 va~~~~~l~~~~~-~~~~G~~~~v~gg 246 (248)
T 2pnf_A 221 VANVVLFLCSELA-SYITGEVIHVNGG 246 (248)
T ss_dssp HHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHhCchh-hcCCCcEEEeCCC
Confidence 9999998885332 2223789999876
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=6.5e-19 Score=175.32 Aligned_cols=233 Identities=11% Similarity=0.049 Sum_probs=148.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+.... +.+.++ ++...... .....++.+
T Consensus 5 ~~~k~vlITGasggiG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~~---------~~~~~~~~--~~~~~~~~~ 67 (264)
T 2pd6_A 5 LRSALALVTGAGSGIGRAVSVRLAGEG---ATVAACDLDRAAA---QETVRL---------LGGPGSKE--GPPRGNHAA 67 (264)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSHHHH---HHHHHT---------C--------------CCEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCChHHH---HHHHHH---------HHhcCccc--cccCcceEE
Confidence 578999999999999999999999998 6788998864321 111111 10000000 000146889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------Cc-cEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc-c-
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------EL-DIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-V- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~v-diViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~-~- 152 (570)
+.+|+++ .+..+.+++ ++ |+|||+||.... .+.++..+++|+.|+.++++++.+. .
T Consensus 68 ~~~D~~~-------~~~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 140 (264)
T 2pd6_A 68 FQADVSE-------ARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVS 140 (264)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEecCCC-------HHHHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHh
Confidence 9999994 433344443 34 999999997643 2456778999999999999988763 1
Q ss_pred -C-ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 153 -K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 153 -~-l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
+ ..++|++||....... +....
T Consensus 141 ~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 164 (264)
T 2pd6_A 141 NGCRGSIINISSIVGKVGN--------------------------------------------------------VGQTN 164 (264)
T ss_dssp HTCCEEEEEECCTHHHHCC--------------------------------------------------------TTBHH
T ss_pred cCCCceEEEECChhhccCC--------------------------------------------------------CCChh
Confidence 2 5689999997543211 12357
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..|.+++.+ ..+++++++||+.|+++.....+. .....+..+. ....++++
T Consensus 165 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---------~~~~~~~~~~---------~~~~~~~~ 226 (264)
T 2pd6_A 165 YAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQ---------KVVDKITEMI---------PMGHLGDP 226 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-------------------CTGGGC---------TTCSCBCH
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCH---------HHHHHHHHhC---------CCCCCCCH
Confidence 999999999888765 358999999999999875432110 0010011110 11246789
Q ss_pred HHHHHHHHHHHHHhhCCCCCCceEEecCCCCCcccHHH
Q 008324 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVS 343 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~~~~pit~~~ 343 (570)
+|+|++++.++.... ....++++++.++ ..+++..
T Consensus 227 ~dva~~~~~l~~~~~-~~~~G~~~~v~gg--~~~~~~~ 261 (264)
T 2pd6_A 227 EDVADVVAFLASEDS-GYITGTSVEVTGG--LFMAENL 261 (264)
T ss_dssp HHHHHHHHHHHSGGG-TTCCSCEEEESTT--C------
T ss_pred HHHHHHHHHHcCCcc-cCCCCCEEEECCC--ceecccc
Confidence 999999998875332 2223789999888 4454443
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.6e-18 Score=171.40 Aligned_cols=220 Identities=14% Similarity=0.134 Sum_probs=148.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce-E
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI-T 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv-~ 88 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+... .+.+.+++ ..++ .
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~G---~~V~~~~r~~~~---~~~~~~~~---------------------~~~~~~ 61 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAASG---ARLILIDREAAA---LDRAAQEL---------------------GAAVAA 61 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHHH---------------------GGGEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHHh---------------------ccccee
Confidence 679999999999999999999999998 678999986422 11111111 1345 7
Q ss_pred EEeccCCCCCCCCCchhhHHHHh------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
++.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 62 ~~~~D~~~-------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 134 (254)
T 2wsb_A 62 RIVADVTD-------AEAMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVAR 134 (254)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCC-------HHHHHHHHHHHHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 89999995 33333443 579999999997543 1345677899999988887766431 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+....+ .+...|+
T Consensus 135 ~~~~iv~isS~~~~~~~~~------------------------------------------------------~~~~~Y~ 160 (254)
T 2wsb_A 135 GAGAIVNLGSMSGTIVNRP------------------------------------------------------QFASSYM 160 (254)
T ss_dssp TCEEEEEECCGGGTSCCSS------------------------------------------------------SCBHHHH
T ss_pred CCcEEEEEecchhccCCCC------------------------------------------------------CcchHHH
Confidence 5789999999865432110 1226799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..|.+++.+ ..+++++++||+.|+++.....+ ...........+. ....+++++|
T Consensus 161 ~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~-------~~~~~~~~~~~~~---------~~~~~~~~~d 224 (254)
T 2wsb_A 161 ASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMR-------ERPELFETWLDMT---------PMGRCGEPSE 224 (254)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHH-------TCHHHHHHHHHTS---------TTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccc-------cChHHHHHHHhcC---------CCCCCCCHHH
Confidence 9999999998765 34899999999999986432110 0011111222111 1134789999
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++.++..... ...++++++.+|
T Consensus 225 va~~~~~l~~~~~~-~~~G~~~~v~gG 250 (254)
T 2wsb_A 225 IAAAALFLASPAAS-YVTGAILAVDGG 250 (254)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCcccc-cccCCEEEECCC
Confidence 99999988753322 223789999876
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-18 Score=174.17 Aligned_cols=228 Identities=14% Similarity=0.114 Sum_probs=151.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|.... ..+.+. +.++.. ..++.+
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~G---~~v~~~~r~~~~--~~~~~~---------~~l~~~---------~~~~~~ 75 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRRG---ASVVVNYGSSSK--AAEEVV---------AELKKL---------GAQGVA 75 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHH---------HHHHHT---------TCCEEE
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCchH--HHHHHH---------HHHHhc---------CCcEEE
Confidence 678999999999999999999999998 678888884211 111111 111110 257889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc-cCc
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~l 154 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++.+. ..-
T Consensus 76 ~~~D~~~-------~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 148 (274)
T 1ja9_A 76 IQADISK-------PSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG 148 (274)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999994 443444444 79999999997542 1345678999999999999998764 111
Q ss_pred eEEEEEecceee-cCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 155 KVFVHVSTAYVA-GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 155 ~~~V~vSTa~v~-~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
.++|++||..++ ... +....|+.
T Consensus 149 ~~iv~~sS~~~~~~~~--------------------------------------------------------~~~~~Y~~ 172 (274)
T 1ja9_A 149 GRIILTSSIAAVMTGI--------------------------------------------------------PNHALYAG 172 (274)
T ss_dssp EEEEEECCGGGTCCSC--------------------------------------------------------CSCHHHHH
T ss_pred CEEEEEcChHhccCCC--------------------------------------------------------CCCchHHH
Confidence 689999998655 211 12357999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCC-----CCccccCccchHHHHHHHhcCCceeeecCCCeeeeee
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEP-----FPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep-----~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
||+..|.+++.+ ..+++++++||+.|.++.... .+....... ..........+ ....+++
T Consensus 173 sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---------~~~~~~~ 242 (274)
T 1ja9_A 173 SKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMP-QEKIDEGLANM---------NPLKRIG 242 (274)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCC-HHHHHHHHHHT---------STTSSCB
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCc-hHHHHHHHHhc---------CCCCCcc
Confidence 999999998765 348999999999998754321 000000100 01111112211 1223578
Q ss_pred ehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++|+|++++.++..... ...+++|++++|
T Consensus 243 ~~~dva~~i~~l~~~~~~-~~~G~~~~v~gG 272 (274)
T 1ja9_A 243 YPADIGRAVSALCQEESE-WINGQVIKLTGG 272 (274)
T ss_dssp CHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCcccc-cccCcEEEecCC
Confidence 999999999988853322 123789999876
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.9e-19 Score=171.11 Aligned_cols=182 Identities=15% Similarity=0.140 Sum_probs=135.5
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+||||||+||++++++|++. +|+++.|+... .+++. ++. .. .++.+
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~-----~V~~~~r~~~~---~~~~~-------------~~~---------~~-~~~~~ 49 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH-----DLLLSGRRAGA---LAELA-------------REV---------GA-RALPA 49 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS-----EEEEECSCHHH---HHHHH-------------HHH---------TC-EECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC-----CEEEEECCHHH---HHHHH-------------Hhc---------cC-cEEEe
Confidence 68999999999999999999975 78888886421 11211 111 11 68899
Q ss_pred cCCCCCCCCCchhhHHHHhC---CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEec
Q 008324 93 DISSEDLGLKDSNLKEELWN---ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~---~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vST 162 (570)
|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++++. +..+||++||
T Consensus 50 D~~~-------~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~sS 121 (207)
T 2yut_A 50 DLAD-------ELEAKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQ-KGARAVFFGA 121 (207)
T ss_dssp CTTS-------HHHHHHHHHHHCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEE-EEEEEEEECC
T ss_pred eCCC-------HHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhc-CCcEEEEEcC
Confidence 9994 444456666 89999999997543 2356778999999999999999553 6789999999
Q ss_pred ceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHH
Q 008324 163 AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (570)
Q Consensus 163 a~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv 242 (570)
..++... .....|+.||+..|.++
T Consensus 122 ~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~~~ 145 (207)
T 2yut_A 122 YPRYVQV--------------------------------------------------------PGFAAYAAAKGALEAYL 145 (207)
T ss_dssp CHHHHSS--------------------------------------------------------TTBHHHHHHHHHHHHHH
T ss_pred hhhccCC--------------------------------------------------------CCcchHHHHHHHHHHHH
Confidence 8765321 12467999999999998
Q ss_pred HHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHH
Q 008324 243 QQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (570)
Q Consensus 243 ~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~ 317 (570)
+.+ ..+++++++||+.|+++... +.+....++++++|+|++++.++.
T Consensus 146 ~~~~~~~~~~gi~v~~v~pg~v~t~~~~----------------------------~~~~~~~~~~~~~dva~~~~~~~~ 197 (207)
T 2yut_A 146 EAARKELLREGVHLVLVRLPAVATGLWA----------------------------PLGGPPKGALSPEEAARKVLEGLF 197 (207)
T ss_dssp HHHHHHHHTTTCEEEEECCCCBCSGGGG----------------------------GGTSCCTTCBCHHHHHHHHHHHHC
T ss_pred HHHHHHHhhhCCEEEEEecCcccCCCcc----------------------------ccCCCCCCCCCHHHHHHHHHHHHh
Confidence 765 25899999999999885310 001123578999999999998885
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.9e-18 Score=170.97 Aligned_cols=207 Identities=18% Similarity=0.208 Sum_probs=149.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||+|+||++++++|++.| .+|+++.|+..... ..++.+
T Consensus 26 ~~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~------------------------------~~~~~~ 72 (260)
T 3un1_A 26 NQQKVVVITGASQGIGAGLVRAYRDRN---YRVVATSRSIKPSA------------------------------DPDIHT 72 (260)
T ss_dssp TTCCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESSCCCCS------------------------------STTEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCChhhcc------------------------------cCceEE
Confidence 678999999999999999999999999 68899999764321 246889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--c
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~ 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.. + .
T Consensus 73 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 145 (260)
T 3un1_A 73 VAGDISK-------PETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQ 145 (260)
T ss_dssp EESCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EEccCCC-------HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 9999994 443444443 79999999997532 244677899999999999998742 1 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||..+.....+ .....|+
T Consensus 146 ~~g~iv~isS~~~~~~~~~------------------------------------------------------~~~~~Y~ 171 (260)
T 3un1_A 146 GSGHIVSITTSLVDQPMVG------------------------------------------------------MPSALAS 171 (260)
T ss_dssp TCEEEEEECCTTTTSCBTT------------------------------------------------------CCCHHHH
T ss_pred CCcEEEEEechhhccCCCC------------------------------------------------------CccHHHH
Confidence 5678999999754322110 2235799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..|.+.+.+ ..++++.+++|+.|.++...+ .. ....... .....+..++|
T Consensus 172 ~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~---------~~---~~~~~~~---------~p~~r~~~~~d 230 (260)
T 3un1_A 172 LTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA---------ET---HSTLAGL---------HPVGRMGEIRD 230 (260)
T ss_dssp HHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG---------GG---HHHHHTT---------STTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH---------HH---HHHHhcc---------CCCCCCcCHHH
Confidence 9999999998765 347999999999999875421 00 1111111 12234678999
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++.+.. . ..-.++++++.+|
T Consensus 231 va~av~~L~~--~-~~itG~~i~vdGG 254 (260)
T 3un1_A 231 VVDAVLYLEH--A-GFITGEILHVDGG 254 (260)
T ss_dssp HHHHHHHHHH--C-TTCCSCEEEESTT
T ss_pred HHHHHHHhcc--c-CCCCCcEEEECCC
Confidence 9999998832 2 2223789999887
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=3.2e-18 Score=169.46 Aligned_cols=221 Identities=14% Similarity=0.154 Sum_probs=152.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcC-CCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA-ADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~-~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+ .... +.+.++ ++.. ..++.
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~G---~~V~~~~r~~~~~~---~~~~~~---------~~~~---------~~~~~ 60 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARAG---AKVGLHGRKAPANI---DETIAS---------MRAD---------GGDAA 60 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCCTTH---HHHHHH---------HHHT---------TCEEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEECCCchhhH---HHHHHH---------HHhc---------CCceE
Confidence 679999999999999999999999998 678999997 4322 111111 1111 25788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCcc-CC---c----cccHHHHHHHhHHHHHHHHHHHHHc-c
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAI-TK---F----DERYDVAFGINTLGVIHLVNFAKKC-V 152 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~-v~---f----~~~~~~~~~~Nv~gt~~ll~la~~~-~ 152 (570)
++.+|+++ .+..+.+++ ++|+|||+||. .. + .+.++..+++|+.|+.++++.+... .
T Consensus 61 ~~~~D~~~-------~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 133 (258)
T 3afn_B 61 FFAADLAT-------SEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLA 133 (258)
T ss_dssp EEECCTTS-------HHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 99999994 444445554 79999999996 32 1 1336677899999999998877532 1
Q ss_pred --C--c---eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccC
Q 008324 153 --K--L---KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLH 225 (570)
Q Consensus 153 --~--l---~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 225 (570)
+ . .++|++||.+.+....
T Consensus 134 ~~~~~~~~~~~iv~~sS~~~~~~~~------------------------------------------------------- 158 (258)
T 3afn_B 134 AAAKASGQTSAVISTGSIAGHTGGG------------------------------------------------------- 158 (258)
T ss_dssp HHHHHHTSCEEEEEECCTHHHHCCC-------------------------------------------------------
T ss_pred hcccCCCCCcEEEEecchhhccCCC-------------------------------------------------------
Confidence 1 2 7899999986543100
Q ss_pred CCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeee
Q 008324 226 GWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIM 300 (570)
Q Consensus 226 ~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~ 300 (570)
+....|+.||+..|.+++.+ ..+++++++||+.|+++..... ...+...+..+. ...
T Consensus 159 ~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~---------~~~~~~~~~~~~---------~~~ 220 (258)
T 3afn_B 159 PGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK---------TQDVRDRISNGI---------PMG 220 (258)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC---------CHHHHHHHHTTC---------TTC
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc---------CHHHHHHHhccC---------CCC
Confidence 12357999999999998765 3489999999999998754321 111222222221 123
Q ss_pred eeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 301 d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++++|+|++++.++.......-.+++|++.++
T Consensus 221 ~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg 254 (258)
T 3afn_B 221 RFGTAEEMAPAFLFFASHLASGYITGQVLDINGG 254 (258)
T ss_dssp SCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTT
T ss_pred cCCCHHHHHHHHHHHhCcchhccccCCEEeECCC
Confidence 5789999999999887543220123789999887
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.9e-18 Score=170.17 Aligned_cols=219 Identities=14% Similarity=0.137 Sum_probs=141.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEE-EcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF-VRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~l-vR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
++||+|+||||||+||++++++|++.| .+|+++ .|+.... +.+.++ ++. ...++.
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G---~~V~~~~~r~~~~~---~~~~~~---------~~~---------~~~~~~ 58 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMG---ANIVLNGSPASTSL---DATAEE---------FKA---------AGINVV 58 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEECTTCSHH---HHHHHH---------HHH---------TTCCEE
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCcCHHHH---HHHHHH---------HHh---------cCCcEE
Confidence 468999999999999999999999998 677887 4544321 121111 111 025788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~--- 151 (570)
++.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 59 ~~~~D~~~-------~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~ 131 (247)
T 2hq1_A 59 VAKGDVKN-------PEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLK 131 (247)
T ss_dssp EEESCTTS-------HHHHHHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 99999994 443444443 79999999997532 2346778999999999998887642
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||....... +....|
T Consensus 132 ~~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y 155 (247)
T 2hq1_A 132 QKSGKIINITSIAGIIGN--------------------------------------------------------AGQANY 155 (247)
T ss_dssp HTCEEEEEECC-----------------------------------------------------------------CHHH
T ss_pred cCCcEEEEEcChhhccCC--------------------------------------------------------CCCcHh
Confidence 256799999997432111 113579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..|.+++.+ ..++++++++|+.+.++.....+ .........+. ....+++++
T Consensus 156 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~~~---------~~~~~~~~~ 217 (247)
T 2hq1_A 156 AASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLP---------DKVKEMYLNNI---------PLKRFGTPE 217 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC---------HHHHHHHHTTS---------TTSSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcc---------hHHHHHHHhhC---------CCCCCCCHH
Confidence 99999999988765 34799999999998765321111 11111222221 112468999
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++..... ...+++|++.++
T Consensus 218 dva~~~~~l~~~~~~-~~~G~~~~v~gG 244 (247)
T 2hq1_A 218 EVANVVGFLASDDSN-YITGQVINIDGG 244 (247)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHcCcccc-cccCcEEEeCCC
Confidence 999999888753322 223789999887
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.79 E-value=3.4e-18 Score=170.49 Aligned_cols=220 Identities=16% Similarity=0.130 Sum_probs=139.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+.... +.+. +.+... ..++.+
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~---------~~~~~~---------~~~~~~ 67 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFG---AVIHTCARNEYEL---NECL---------SKWQKK---------GFQVTG 67 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHH---------HHHHHT---------TCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHH---------HHHHhc---------CCeeEE
Confidence 578999999999999999999999998 6788888864221 1111 111111 246889
Q ss_pred EeccCCCCCCCCCchhhHHHHh--------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---
Q 008324 90 VPGDISSEDLGLKDSNLKEELW--------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~--------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~--- 151 (570)
+.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 68 ~~~D~~~-------~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~ 140 (266)
T 1xq1_A 68 SVCDASL-------RPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKA 140 (266)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCC-------HHHHHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 9999994 33333443 579999999997532 2346777999999999999988421
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||...+... +....|
T Consensus 141 ~~~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 164 (266)
T 1xq1_A 141 SGCGNIIFMSSIAGVVSA--------------------------------------------------------SVGSIY 164 (266)
T ss_dssp HSSCEEEEEC------------------------------------------------------------------CCHH
T ss_pred cCCcEEEEEccchhccCC--------------------------------------------------------CCCchH
Confidence 267899999998654321 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..|.+++.+ ..+++++++||+.|+++...... + ......... ......+++++
T Consensus 165 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~-----~~~~~~~~~---------~~~~~~~~~~~ 227 (266)
T 1xq1_A 165 SATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY---D-----DEFKKVVIS---------RKPLGRFGEPE 227 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC------------------------------------------CCGG
T ss_pred HHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc---C-----HHHHHHHHh---------cCCCCCCcCHH
Confidence 99999999998765 34899999999999997543210 0 000000000 01112467899
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++..... ...++++++.++
T Consensus 228 dva~~~~~l~~~~~~-~~~G~~~~v~gG 254 (266)
T 1xq1_A 228 EVSSLVAFLCMPAAS-YITGQTICVDGG 254 (266)
T ss_dssp GGHHHHHHHTSGGGT-TCCSCEEECCCC
T ss_pred HHHHHHHHHcCcccc-CccCcEEEEcCC
Confidence 999999988753222 223789999887
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=2.8e-18 Score=168.28 Aligned_cols=204 Identities=11% Similarity=0.110 Sum_probs=147.6
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|+||||||+||++++++|++.| .+|+++.|+.. . +++.++.
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G---~~V~~~~r~~~-~--------------------------------~~~~~~~ 45 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARG---YRVVVLDLRRE-G--------------------------------EDLIYVE 45 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHT---CEEEEEESSCC-S--------------------------------SSSEEEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEccCcc-c--------------------------------cceEEEe
Confidence 7899999999999999999999999 67888888754 1 3457899
Q ss_pred ccCCCCCCCCCchhhHHHHhC------CccEEEEcCccCCcc-------c----cHHHHHHHhHHHHHHHHHHHHHc-cC
Q 008324 92 GDISSEDLGLKDSNLKEELWN------ELDIMVNSAAITKFD-------E----RYDVAFGINTLGVIHLVNFAKKC-VK 153 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~------~vdiViH~AA~v~f~-------~----~~~~~~~~Nv~gt~~ll~la~~~-~~ 153 (570)
+|+++ .+..+.+++ ++|+|||+||..... + .++..+++|+.|+.++++++.+. ..
T Consensus 46 ~D~~~-------~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 118 (242)
T 1uay_A 46 GDVTR-------EEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRE 118 (242)
T ss_dssp CCTTC-------HHHHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred CCCCC-------HHHHHHHHHHHHhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 99994 444445554 799999999975421 1 56788999999999999988763 11
Q ss_pred --------ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccC
Q 008324 154 --------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLH 225 (570)
Q Consensus 154 --------l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 225 (570)
..++|++||...+...
T Consensus 119 ~~~~~~~~~~~iv~~sS~~~~~~~-------------------------------------------------------- 142 (242)
T 1uay_A 119 NPPDAEGQRGVIVNTASVAAFEGQ-------------------------------------------------------- 142 (242)
T ss_dssp CCCCTTSCSEEEEEECCTHHHHCC--------------------------------------------------------
T ss_pred cCCCCCCCCeEEEEeCChhhccCC--------------------------------------------------------
Confidence 1389999998765421
Q ss_pred CCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeee
Q 008324 226 GWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIM 300 (570)
Q Consensus 226 ~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~ 300 (570)
.....|+.||+..|.+++.. ..+++++++||+.|+++.....+ .........+.. . ..
T Consensus 143 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~~~~----~----~~ 205 (242)
T 1uay_A 143 IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP---------EKAKASLAAQVP----F----PP 205 (242)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC---------HHHHHHHHTTCC----S----SC
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccc---------hhHHHHHHhhCC----C----cc
Confidence 12367999999999887654 34899999999999886432111 111122222211 0 02
Q ss_pred eeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 301 d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.+++++|+|++++.++.. ....+++|++.++
T Consensus 206 ~~~~~~dva~~~~~l~~~---~~~~G~~~~v~gG 236 (242)
T 1uay_A 206 RLGRPEEYAALVLHILEN---PMLNGEVVRLDGA 236 (242)
T ss_dssp SCCCHHHHHHHHHHHHHC---TTCCSCEEEESTT
T ss_pred cCCCHHHHHHHHHHHhcC---CCCCCcEEEEcCC
Confidence 367899999999998863 2223789999887
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.2e-18 Score=173.68 Aligned_cols=245 Identities=17% Similarity=0.155 Sum_probs=164.6
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
-++||+|+||||+|+||++++++|++.| .+|+++.|+.... +... +.+++..+ ...++.
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~---~~~~---------~~l~~~~~------~~~~~~ 66 (281)
T 3svt_A 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAG---ASVMIVGRNPDKL---AGAV---------QELEALGA------NGGAIR 66 (281)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHH---------HHHHTTCC------SSCEEE
T ss_pred CcCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHH---------HHHHHhCC------CCceEE
Confidence 4789999999999999999999999999 6788888864321 1111 11111110 013788
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHHc--
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKKC-- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~----f----~~~~~~~~~~Nv~gt~~ll~la~~~-- 151 (570)
++.+|+++ .+..+.++ .++|++||+||... + .+.++..+++|+.|+.++++.+...
T Consensus 67 ~~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~ 139 (281)
T 3svt_A 67 YEPTDITN-------EDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMV 139 (281)
T ss_dssp EEECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 99999995 33333443 36899999999732 1 2446778999999999999988653
Q ss_pred -cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+-.++|++||...+... .....
T Consensus 140 ~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 163 (281)
T 3svt_A 140 RGGGGSFVGISSIAASNTH--------------------------------------------------------RWFGA 163 (281)
T ss_dssp HTTCEEEEEECCHHHHSCC--------------------------------------------------------TTCTH
T ss_pred hcCCcEEEEEeCHHHcCCC--------------------------------------------------------CCChh
Confidence 233489999997654321 12357
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..|.+++.+ ..++++.+++|+.|.++..... .. ..........+. ....+..+
T Consensus 164 Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---~~----~~~~~~~~~~~~---------p~~r~~~~ 227 (281)
T 3svt_A 164 YGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAI---TE----SAELSSDYAMCT---------PLPRQGEV 227 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH---HT----CHHHHHHHHHHC---------SSSSCBCH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhc---cc----CHHHHHHHHhcC---------CCCCCCCH
Confidence 999999999998765 4579999999999988643210 00 011111111111 11235679
Q ss_pred HHHHHHHHHHHHHhhCCCCCCceEEecCCCCCccc-HHHHHHHHhhhcccCC
Q 008324 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVT-LVSILDYGFVYFTKKP 356 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~~~~pit-~~~l~~~i~~~~~~~p 356 (570)
+|+|++++.++.+... .-.++++++.+| ..++ ..++.+.+.+.++..+
T Consensus 228 ~dva~~~~~l~s~~~~-~itG~~~~vdgG--~~~~~~~~~~~~~~~~~~~~~ 276 (281)
T 3svt_A 228 EDVANMAMFLLSDAAS-FVTGQVINVDGG--QMLRRGPDFSAMLEPVFGRDA 276 (281)
T ss_dssp HHHHHHHHHHHSGGGT-TCCSCEEEESTT--GGGSCCCCCHHHHHHHHCTTG
T ss_pred HHHHHHHHHHhCcccC-CCCCCEEEeCCC--hhcccCCcchhccccccCCcc
Confidence 9999999988864332 223789999888 4555 5677777777776654
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.78 E-value=1.9e-18 Score=169.97 Aligned_cols=218 Identities=13% Similarity=0.148 Sum_probs=146.9
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEE-EcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF-VRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~l-vR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
||+|+||||||+||++++++|++.| .+|+++ .|+... .+.+.++ ++.. ..++.++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G---~~v~~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~~ 56 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAG---CKVLVNYARSAKA---AEEVSKQ---------IEAY---------GGQAITF 56 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHH---HHHHHHH---------HHHH---------TCEEEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCCHHH---HHHHHHH---------HHhc---------CCcEEEE
Confidence 6899999999999999999999998 567774 565321 1111111 1111 2578899
Q ss_pred eccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---cC
Q 008324 91 PGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~ 153 (570)
.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .+
T Consensus 57 ~~D~~~-------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 129 (244)
T 1edo_A 57 GGDVSK-------EADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR 129 (244)
T ss_dssp ECCTTS-------HHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred eCCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Confidence 999994 333444443 69999999997642 1446778999999999999988763 35
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||....... +....|+.
T Consensus 130 ~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~ 153 (244)
T 1edo_A 130 KGRIINIASVVGLIGN--------------------------------------------------------IGQANYAA 153 (244)
T ss_dssp CEEEEEECCTHHHHCC--------------------------------------------------------TTCHHHHH
T ss_pred CCEEEEECChhhcCCC--------------------------------------------------------CCCccchh
Confidence 6899999997543211 11357999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHH
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..|.+.+.+ ..+++++++||+.|.++...... ........... ....+++++|+
T Consensus 154 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~~~---------~~~~~~~~~dv 215 (244)
T 1edo_A 154 AKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLG---------EDMEKKILGTI---------PLGRTGQPENV 215 (244)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC---------HHHHHHHHTSC---------TTCSCBCHHHH
T ss_pred hHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcC---------hHHHHHHhhcC---------CCCCCCCHHHH
Confidence 999988887654 35799999999999876432110 11111111111 11246889999
Q ss_pred HHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|++++.++.........+++|++.++
T Consensus 216 a~~~~~l~~~~~~~~~~G~~~~v~gG 241 (244)
T 1edo_A 216 AGLVEFLALSPAASYITGQAFTIDGG 241 (244)
T ss_dssp HHHHHHHHHCSGGGGCCSCEEEESTT
T ss_pred HHHHHHHhCCCccCCcCCCEEEeCCC
Confidence 99999887422211123789999876
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.78 E-value=2.9e-18 Score=169.41 Aligned_cols=218 Identities=15% Similarity=0.114 Sum_probs=146.9
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
..+++|+|+||||+|+||++++++|++.| .+|+++.|+... .+.+. ++. ..++
T Consensus 10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~~--------~~~~ 62 (249)
T 3f9i_A 10 IDLTGKTSLITGASSGIGSAIARLLHKLG---SKVIISGSNEEK---LKSLG-------------NAL--------KDNY 62 (249)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HHH--------CSSE
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEcCCHHH---HHHHH-------------HHh--------ccCc
Confidence 45789999999999999999999999998 678898886422 11111 111 2578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhC---CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---cCc
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELWN---ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKL 154 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~---~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~l 154 (570)
.++.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+.
T Consensus 63 ~~~~~D~~~-------~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~ 135 (249)
T 3f9i_A 63 TIEVCNLAN-------KEECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRY 135 (249)
T ss_dssp EEEECCTTS-------HHHHHHHHHTCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred cEEEcCCCC-------HHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 889999994 444445554 68999999997542 3567888999999999998887542 255
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||...+... +....|+.|
T Consensus 136 g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~s 159 (249)
T 3f9i_A 136 GRIINISSIVGIAGN--------------------------------------------------------PGQANYCAS 159 (249)
T ss_dssp EEEEEECCCCC--CC--------------------------------------------------------SCSHHHHHH
T ss_pred cEEEEEccHHhccCC--------------------------------------------------------CCCchhHHH
Confidence 789999997654321 123579999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHH
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..|.+++.+ ..++++.+++|+.|.++....... ........+. ....+..++|+|
T Consensus 160 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---------~~~~~~~~~~---------~~~~~~~~~dva 221 (249)
T 3f9i_A 160 KAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNE---------KQREAIVQKI---------PLGTYGIPEDVA 221 (249)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCH---------HHHHHHHHHC---------TTCSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCH---------HHHHHHHhcC---------CCCCCcCHHHHH
Confidence 99988887754 357999999999998865432111 1111111111 123467899999
Q ss_pred HHHHHHHHHhhCCCCCCceEEecCC
Q 008324 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++.++..... .-.++++++.+|
T Consensus 222 ~~~~~l~s~~~~-~~tG~~~~vdgG 245 (249)
T 3f9i_A 222 YAVAFLASNNAS-YITGQTLHVNGG 245 (249)
T ss_dssp HHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHcCCccC-CccCcEEEECCC
Confidence 999988864332 223789999887
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=9.3e-18 Score=166.93 Aligned_cols=227 Identities=14% Similarity=0.141 Sum_probs=151.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|++.| .+|+++.|+..... +.++ .+.++. ..++.+
T Consensus 12 ~~~k~vlITGasggiG~~~a~~l~~~G---~~V~~~~r~~~~~~--~~~~----------~l~~~~--------~~~~~~ 68 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAFTRAVAAAG---ANVAVIYRSAADAV--EVTE----------KVGKEF--------GVKTKA 68 (265)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTT---EEEEEEESSCTTHH--HHHH----------HHHHHH--------TCCEEE
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEeCcchhhH--HHHH----------HHHHhc--------CCeeEE
Confidence 678999999999999999999999998 68899999654321 1111 111111 257889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc----
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---- 151 (570)
+.+|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 69 ~~~Dl~~-------~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 141 (265)
T 1h5q_A 69 YQCDVSN-------TDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQK 141 (265)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeeCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhc
Confidence 9999995 33333333 359999999997542 2346677999999999999988653
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+...+||++||...+....+. ... ......|
T Consensus 142 ~~~~~iv~~sS~~~~~~~~~~--~~~-----------------------------------------------~~~~~~Y 172 (265)
T 1h5q_A 142 QQKGSIVVTSSMSSQIINQSS--LNG-----------------------------------------------SLTQVFY 172 (265)
T ss_dssp TCCEEEEEECCGGGTSCCEEE--TTE-----------------------------------------------ECSCHHH
T ss_pred CCCceEEEeCCchhhcccccc--ccc-----------------------------------------------ccccccc
Confidence 124789999997654321100 000 0224679
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..|.+++.+ ..+++++++||+.|.++...... ........... ....+++++
T Consensus 173 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~~~---------~~~~~~~~~ 234 (265)
T 1h5q_A 173 NSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD---------KKIRDHQASNI---------PLNRFAQPE 234 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC---------HHHHHHHHHTC---------TTSSCBCGG
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccc---------hhHHHHHHhcC---------cccCCCCHH
Confidence 99999999998765 34799999999999887542210 11111111111 112367899
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++..... ...+++|++.+|
T Consensus 235 dva~~~~~l~~~~~~-~~~G~~~~v~gG 261 (265)
T 1h5q_A 235 EMTGQAILLLSDHAT-YMTGGEYFIDGG 261 (265)
T ss_dssp GGHHHHHHHHSGGGT-TCCSCEEEECTT
T ss_pred HHHHHHHhhccCchh-cCcCcEEEecCC
Confidence 999999988753322 223789999887
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.5e-18 Score=165.64 Aligned_cols=184 Identities=15% Similarity=0.194 Sum_probs=134.8
Q ss_pred CC-EEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 12 NK-TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 12 ~k-~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
|| +|+||||||+||++++++|+ .| .+|+++.|+.. .+
T Consensus 2 ~kM~vlVtGasg~iG~~~~~~l~-~g---~~V~~~~r~~~--------------------------------------~~ 39 (202)
T 3d7l_A 2 NAMKILLIGASGTLGSAVKERLE-KK---AEVITAGRHSG--------------------------------------DV 39 (202)
T ss_dssp CSCEEEEETTTSHHHHHHHHHHT-TT---SEEEEEESSSS--------------------------------------SE
T ss_pred CCcEEEEEcCCcHHHHHHHHHHH-CC---CeEEEEecCcc--------------------------------------ce
Confidence 44 89999999999999999999 88 67888888541 35
Q ss_pred eccCCCCCCCCCchhhHHHHhC---CccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHHHc-cCceEEEE
Q 008324 91 PGDISSEDLGLKDSNLKEELWN---ELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVH 159 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~---~vdiViH~AA~v~f~-------~~~~~~~~~Nv~gt~~ll~la~~~-~~l~~~V~ 159 (570)
.+|+++ .+..+.+++ ++|+|||+||..... +.++..+++|+.|+.++++++.+. .+-.++|+
T Consensus 40 ~~D~~~-------~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~ 112 (202)
T 3d7l_A 40 TVDITN-------IDSIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTL 112 (202)
T ss_dssp ECCTTC-------HHHHHHHHHHHCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEE
T ss_pred eeecCC-------HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEE
Confidence 789994 444445554 489999999965321 335667899999999999998864 22268999
Q ss_pred EecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHH
Q 008324 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (570)
Q Consensus 160 vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE 239 (570)
+||.+.+... +....|+.||+..|
T Consensus 113 ~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~~~~ 136 (202)
T 3d7l_A 113 TTGIMMEDPI--------------------------------------------------------VQGASAAMANGAVT 136 (202)
T ss_dssp ECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHHHH
T ss_pred EcchhhcCCC--------------------------------------------------------CccHHHHHHHHHHH
Confidence 9987543211 12357999999999
Q ss_pred HHHHHhc----cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHH
Q 008324 240 MLMQQSK----ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (570)
Q Consensus 240 ~lv~~~~----~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a 315 (570)
.+++.+. .+++++++||+.|+++..+ ...+ ....++++++|+|++++.+
T Consensus 137 ~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~------------------~~~~---------~~~~~~~~~~dva~~~~~~ 189 (202)
T 3d7l_A 137 AFAKSAAIEMPRGIRINTVSPNVLEESWDK------------------LEPF---------FEGFLPVPAAKVARAFEKS 189 (202)
T ss_dssp HHHHHHTTSCSTTCEEEEEEECCBGGGHHH------------------HGGG---------STTCCCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHccCCeEEEEEecCccCCchhh------------------hhhh---------ccccCCCCHHHHHHHHHHh
Confidence 9998763 3799999999999886321 0111 1234679999999999877
Q ss_pred HHHhhCCCCCCceEEe
Q 008324 316 MVAHAKQPSDANIYHV 331 (570)
Q Consensus 316 ~~~~~~~~~~~~iyni 331 (570)
+. . ...+++||+
T Consensus 190 ~~-~---~~~G~~~~v 201 (202)
T 3d7l_A 190 VF-G---AQTGESYQV 201 (202)
T ss_dssp HH-S---CCCSCEEEE
T ss_pred hh-c---cccCceEec
Confidence 73 1 122678886
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=6.8e-18 Score=166.71 Aligned_cols=220 Identities=15% Similarity=0.163 Sum_probs=151.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+.+|+++||||+|+||++++++|++.| .+|+++.|..... .+.+.++ ++.. ..++.+
T Consensus 2 l~~k~~lVTGas~gIG~~ia~~l~~~G---~~V~~~~~~~~~~--~~~~~~~---------~~~~---------~~~~~~ 58 (246)
T 3osu_A 2 KMTKSALVTGASRGIGRSIALQLAEEG---YNVAVNYAGSKEK--AEAVVEE---------IKAK---------GVDSFA 58 (246)
T ss_dssp CCSCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHH--HHHHHHH---------HHHT---------TSCEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCCHHH--HHHHHHH---------HHhc---------CCcEEE
Confidence 468999999999999999999999999 6777777754221 1222211 1111 257889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|+++ .+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 59 ~~~Dv~d-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~ 131 (246)
T 3osu_A 59 IQANVAD-------ADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQ 131 (246)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 9999994 443444443 79999999997632 2456778999999999999988431 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... +....|+
T Consensus 132 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 155 (246)
T 3osu_A 132 RSGAIINLSSVVGAVGN--------------------------------------------------------PGQANYV 155 (246)
T ss_dssp TCEEEEEECCHHHHHCC--------------------------------------------------------TTCHHHH
T ss_pred CCCEEEEEcchhhcCCC--------------------------------------------------------CCChHHH
Confidence 56799999997544221 1235799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.+ ..++++.+++|+.|.++..+..+ .........+.. ...+...+|
T Consensus 156 ~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~---------~~~~~~~~~~~p---------~~r~~~~~d 217 (246)
T 3osu_A 156 ATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALS---------DELKEQMLTQIP---------LARFGQDTD 217 (246)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSC---------HHHHHHHHTTCT---------TCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccC---------HHHHHHHHhcCC---------CCCCcCHHH
Confidence 9999888887754 45899999999999987543221 122222222221 234567899
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++.++..... .-.++++++.+|
T Consensus 218 va~~v~~l~s~~~~-~itG~~i~vdgG 243 (246)
T 3osu_A 218 IANTVAFLASDKAK-YITGQTIHVNGG 243 (246)
T ss_dssp HHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCcccc-CCCCCEEEeCCC
Confidence 99999988764332 223789999887
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=3.3e-18 Score=170.61 Aligned_cols=230 Identities=16% Similarity=0.172 Sum_probs=151.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+... .+.+. +.+++.. ..++.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~---------~~l~~~~--------~~~~~~ 61 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEG---AHIVLVARQVDR---LHEAA---------RSLKEKF--------GVRVLE 61 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH---------HHHHHHH--------CCCEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCHHH---HHHHH---------HHHHHhc--------CCceEE
Confidence 579999999999999999999999998 678888886422 11111 1111111 246889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 62 ~~~D~~~-------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 134 (263)
T 3ai3_A 62 VAVDVAT-------PEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRAR 134 (263)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 9999994 443344443 79999999997532 2456778999999999999887542 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+... +....|+
T Consensus 135 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 158 (263)
T 3ai3_A 135 GGGAIIHNASICAVQPL--------------------------------------------------------WYEPIYN 158 (263)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHHH
T ss_pred CCcEEEEECchhhcCCC--------------------------------------------------------CCcchHH
Confidence 56899999998655321 1235799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCC-CccccCccc-hHHHHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPF-PGWVEDLKT-INTLFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~-~gw~~~~~~-~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
.||+..|.+.+.+ ..+++++++||+.|+++..... +.+...... ..........+. . ....++.+
T Consensus 159 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--p~~~~~~~ 230 (263)
T 3ai3_A 159 VTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEH------A--PIKRFASP 230 (263)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHH------C--TTCSCBCH
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcC------C--CCCCCcCH
Confidence 9999999988765 3589999999999998643110 000000000 011111111110 0 11357899
Q ss_pred HHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|+|++++.++.... ....+++|++.+|
T Consensus 231 ~dvA~~~~~l~s~~~-~~~~G~~~~vdgG 258 (263)
T 3ai3_A 231 EELANFFVFLCSERA-TYSVGSAYFVDGG 258 (263)
T ss_dssp HHHHHHHHHHTSTTC-TTCCSCEEEESTT
T ss_pred HHHHHHHHHHcCccc-cCCCCcEEEECCC
Confidence 999999998875221 1223789999887
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=4.4e-18 Score=168.70 Aligned_cols=226 Identities=13% Similarity=0.178 Sum_probs=152.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.|. ..|+++.|+... ...+.+. +..+ ..++.+
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~--~~v~~~~r~~~~-~~~~~l~-------------~~~~-------~~~~~~ 59 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNL--KNFVILDRVENP-TALAELK-------------AINP-------KVNITF 59 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCC--SEEEEEESSCCH-HHHHHHH-------------HHCT-------TSEEEE
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC--cEEEEEecCchH-HHHHHHH-------------HhCC-------CceEEE
Confidence 5789999999999999999999999984 247888887642 1122221 1111 246889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHc-c-C----ceE
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC-V-K----LKV 156 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~-~-~----l~~ 156 (570)
+.+|++++ .+..+.++ .++|+|||+||... .+.++..+++|+.|+.++++++... . . -.+
T Consensus 60 ~~~D~~~~------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~ 132 (254)
T 1sby_A 60 HTYDVTVP------VAESKKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGI 132 (254)
T ss_dssp EECCTTSC------HHHHHHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEE
T ss_pred EEEecCCC------hHHHHHHHHHHHHhcCCCCEEEECCccCC-HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCE
Confidence 99999953 02222332 37999999999754 4568888999999999999988753 1 1 357
Q ss_pred EEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHH
Q 008324 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (570)
Q Consensus 157 ~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+|++||...+... +....|+.||+
T Consensus 133 iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~ 156 (254)
T 1sby_A 133 IANICSVTGFNAI--------------------------------------------------------HQVPVYSASKA 156 (254)
T ss_dssp EEEECCGGGTSCC--------------------------------------------------------TTSHHHHHHHH
T ss_pred EEEECchhhccCC--------------------------------------------------------CCchHHHHHHH
Confidence 9999998654321 12357999999
Q ss_pred HHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHH
Q 008324 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (570)
Q Consensus 237 ~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~a 311 (570)
..|.+++.+ ..++++++++|+.|.++.......|.+.... +...... ..+.+++++|++
T Consensus 157 a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~----~~~~~~~------------~~~~~~~dvA~~ 220 (254)
T 1sby_A 157 AVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPR----VAELLLS------------HPTQTSEQCGQN 220 (254)
T ss_dssp HHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTT----HHHHHTT------------SCCEEHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHH----HHHHHhc------------CCCCCHHHHHHH
Confidence 999998765 2589999999999988654332223211010 1111111 123489999999
Q ss_pred HHHHHHHhhCCCCCCceEEecCCCCCcccH
Q 008324 312 MIVAMVAHAKQPSDANIYHVGSSLRNPVTL 341 (570)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~~~~pit~ 341 (570)
++.++.. .. .+++|++.+|...+++|
T Consensus 221 i~~~~~~--~~--~G~~~~v~gG~~~~~~~ 246 (254)
T 1sby_A 221 FVKAIEA--NK--NGAIWKLDLGTLEAIEW 246 (254)
T ss_dssp HHHHHHH--CC--TTCEEEEETTEEEECCC
T ss_pred HHHHHHc--CC--CCCEEEEeCCceeEecc
Confidence 9988752 22 37899998873334433
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=8.5e-18 Score=167.50 Aligned_cols=221 Identities=16% Similarity=0.140 Sum_probs=150.1
Q ss_pred hcCCCEEEEECCc--chhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 9 FLENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 9 ~~~~k~VlITGaT--GFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
.++||+|+||||+ |+||++++++|++.| .+|+++.|+.+.....+.+. ++ ..+
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~l~-------------~~---------~~~ 59 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAG---AEVALSYQAERLRPEAEKLA-------------EA---------LGG 59 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHHHHT---CEEEEEESCGGGHHHHHHHH-------------HH---------TTC
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHHH-------------Hh---------cCC
Confidence 3679999999999 999999999999999 67889988763211112211 11 124
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-----------cccHHHHHHHhHHHHHHHHHHH
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFA 148 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-----------~~~~~~~~~~Nv~gt~~ll~la 148 (570)
+.++.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++
T Consensus 60 ~~~~~~D~~~-------~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 132 (261)
T 2wyu_A 60 ALLFRADVTQ-------DEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRA 132 (261)
T ss_dssp CEEEECCTTC-------HHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred cEEEECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 6789999995 333334443 78999999997532 2446778999999999999998
Q ss_pred HHc-cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCC
Q 008324 149 KKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (570)
Q Consensus 149 ~~~-~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 227 (570)
... .+-.++|++||....... +.
T Consensus 133 ~~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~ 156 (261)
T 2wyu_A 133 EPLLREGGGIVTLTYYASEKVV--------------------------------------------------------PK 156 (261)
T ss_dssp TTTEEEEEEEEEEECGGGTSBC--------------------------------------------------------TT
T ss_pred HHHhccCCEEEEEecccccCCC--------------------------------------------------------CC
Confidence 763 222589999996543211 12
Q ss_pred CchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeee
Q 008324 228 PNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDV 302 (570)
Q Consensus 228 ~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
...|+.||+..|.+.+.+ ..++++++++|+.|.++.....+. .......+..+.. ...+
T Consensus 157 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-------~~~~~~~~~~~~p---------~~~~ 220 (261)
T 2wyu_A 157 YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPG-------FTKMYDRVAQTAP---------LRRN 220 (261)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTT-------HHHHHHHHHHHST---------TSSC
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccc-------cHHHHHHHHhcCC---------CCCC
Confidence 357999999999988765 348999999999999875422111 1111111111110 1135
Q ss_pred eehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.+++|+|++++.++..... .-.+++|++.++
T Consensus 221 ~~~~dva~~v~~l~s~~~~-~~tG~~~~vdgG 251 (261)
T 2wyu_A 221 ITQEEVGNLGLFLLSPLAS-GITGEVVYVDAG 251 (261)
T ss_dssp CCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred CCHHHHHHHHHHHcChhhc-CCCCCEEEECCC
Confidence 6799999999988853322 223789999887
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=7.8e-18 Score=167.76 Aligned_cols=211 Identities=16% Similarity=0.157 Sum_probs=147.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+... .+.+.++ . ..++.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~~-------------~--------~~~~~~ 57 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASHVRAMVAEG---AKVVFGDILDEE---GKAMAAE-------------L--------ADAARY 57 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH-------------T--------GGGEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH-------------h--------hcCceE
Confidence 679999999999999999999999998 678888886422 1111111 0 134778
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--c
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~ 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.. + .
T Consensus 58 ~~~D~~~-------~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 130 (260)
T 1nff_A 58 VHLDVTQ-------PAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA 130 (260)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 9999994 444445544 79999999997542 235677899999999777665543 1 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+... +....|+
T Consensus 131 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 154 (260)
T 1nff_A 131 GRGSIINISSIEGLAGT--------------------------------------------------------VACHGYT 154 (260)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTBHHHH
T ss_pred CCCEEEEEeehhhcCCC--------------------------------------------------------CCchhHH
Confidence 56899999998654321 1135799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..|.+.+.. ..+++++++||+.|+++... +... ... . .....+++++|
T Consensus 155 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----~~~~--------------~~~---~--~~~~~~~~~~d 211 (260)
T 1nff_A 155 ATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD----WVPE--------------DIF---Q--TALGRAAEPVE 211 (260)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT----TSCT--------------TCS---C--CSSSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc----cchh--------------hHH---h--CccCCCCCHHH
Confidence 9999999998764 35899999999999987532 1000 000 0 01124678999
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++.++.... ....+++|++.++
T Consensus 212 vA~~v~~l~s~~~-~~~~G~~~~v~gG 237 (260)
T 1nff_A 212 VSNLVVYLASDES-SYSTGAEFVVDGG 237 (260)
T ss_dssp HHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHhCccc-cCCcCCEEEECCC
Confidence 9999998875332 2223789999887
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=5.1e-17 Score=163.63 Aligned_cols=236 Identities=13% Similarity=0.137 Sum_probs=154.6
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcc------cHHHHHHHHHhhhhhHHHHHhhhccccccc
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID------SAALRFQNEVLAKDVFNVLKEKWGTRLNSF 82 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~------~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~ 82 (570)
-++||+++||||+|+||++++++|++.| .+|+++.|++... ...+++.+ . .+.++.
T Consensus 7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~-~-----~~~~~~--------- 68 (281)
T 3s55_A 7 DFEGKTALITGGARGMGRSHAVALAEAG---ADIAICDRCENSDVVGYPLATADDLAE-T-----VALVEK--------- 68 (281)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSCCTTCSSCCCCHHHHHH-H-----HHHHHH---------
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeCCccccccccccccHHHHHH-H-----HHHHHh---------
Confidence 3689999999999999999999999999 6788999974321 01112211 0 011111
Q ss_pred cCCceEEEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHH
Q 008324 83 ISEKITFVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFA 148 (570)
Q Consensus 83 ~~~kv~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la 148 (570)
...++.++.+|+++ .+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++
T Consensus 69 ~~~~~~~~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~ 141 (281)
T 3s55_A 69 TGRRCISAKVDVKD-------RAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAV 141 (281)
T ss_dssp TTCCEEEEECCTTC-------HHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred cCCeEEEEeCCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 13678899999995 433344443 79999999997542 2456778999999999999987
Q ss_pred HH-c--cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccC
Q 008324 149 KK-C--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLH 225 (570)
Q Consensus 149 ~~-~--~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 225 (570)
.. + .+..++|++||...+...
T Consensus 142 ~~~~~~~~~g~iv~isS~~~~~~~-------------------------------------------------------- 165 (281)
T 3s55_A 142 APGMIKRNYGRIVTVSSMLGHSAN-------------------------------------------------------- 165 (281)
T ss_dssp HHHHHHHTCEEEEEECCGGGGSCC--------------------------------------------------------
T ss_pred HHHHHHcCCCEEEEECChhhcCCC--------------------------------------------------------
Confidence 54 2 255789999997544221
Q ss_pred CCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCC---ccccCc--cchHHHHHHHhcCCceeeecC
Q 008324 226 GWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFP---GWVEDL--KTINTLFVASAQGNLRCLVGE 295 (570)
Q Consensus 226 ~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~---gw~~~~--~~~~~~i~~~~~G~~~~~~~~ 295 (570)
.....|+.||+..+.+.+.+ ..++++.+++|+.|.++...... .+.... ....... .. +...
T Consensus 166 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~ 237 (281)
T 3s55_A 166 FAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVE-SV-------FASL 237 (281)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHH-HH-------HHHH
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHH-HH-------HHhh
Confidence 12357999999999988765 34899999999999997653210 000000 0000000 00 0000
Q ss_pred CCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 296 TKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 296 ~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
......+..++|+|++++.++.+.... -.++++++.+|
T Consensus 238 ~~~~~~~~~p~dvA~~v~~L~s~~~~~-itG~~i~vdgG 275 (281)
T 3s55_A 238 HLQYAPFLKPEEVTRAVLFLVDEASSH-ITGTVLPIDAG 275 (281)
T ss_dssp CSSSCSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTT
T ss_pred hccCcCCCCHHHHHHHHHHHcCCcccC-CCCCEEEECCC
Confidence 111246789999999999988643322 23789999987
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.4e-17 Score=164.31 Aligned_cols=220 Identities=12% Similarity=0.093 Sum_probs=148.2
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|+||||||+||++++++|++.| .+|+++.|+... .+.+.+++ .+. ...++.++.
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G---~~V~~~~r~~~~---~~~~~~~~---------~~~--------~~~~~~~~~ 58 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARG---DRVAALDLSAET---LEETARTH---------WHA--------YADKVLRVR 58 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHHH---------STT--------TGGGEEEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHHH---------HHh--------cCCcEEEEE
Confidence 7899999999999999999999998 678889886422 11111111 000 024688999
Q ss_pred ccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc----------cccHHHHHHHhHHHHHHHHHHHHHc---
Q 008324 92 GDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF----------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f----------~~~~~~~~~~Nv~gt~~ll~la~~~--- 151 (570)
+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 59 ~D~~~-------~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 131 (250)
T 2cfc_A 59 ADVAD-------EGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLL 131 (250)
T ss_dssp CCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred ecCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 99994 433444443 79999999997532 1346777899999998887766432
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||...+... +....|
T Consensus 132 ~~~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 155 (250)
T 2cfc_A 132 QGAGVIVNIASVASLVAF--------------------------------------------------------PGRSAY 155 (250)
T ss_dssp HTCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred CCCCEEEEECChhhccCC--------------------------------------------------------CCchhH
Confidence 256899999997654321 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..|.+++.+ ..+++++++||+.|+++.... ... ...+......+. ....+...+
T Consensus 156 ~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~----~~~~~~~~~~~~---------~~~~~~~~~ 219 (250)
T 2cfc_A 156 TTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQW---RLD----QPELRDQVLARI---------PQKEIGTAA 219 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHH---HHT----SHHHHHHHHTTC---------TTCSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCcccc---ccC----CHHHHHHHHhcC---------CCCCCcCHH
Confidence 99999999998765 348999999999999975421 000 011111222221 112467899
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++.... ....++++++.+|
T Consensus 220 dva~~~~~l~~~~~-~~~~G~~~~v~gG 246 (250)
T 2cfc_A 220 QVADAVMFLAGEDA-TYVNGAALVMDGA 246 (250)
T ss_dssp HHHHHHHHHHSTTC-TTCCSCEEEESTT
T ss_pred HHHHHHHHHcCchh-hcccCCEEEECCc
Confidence 99999998875321 2223788998876
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.3e-17 Score=165.75 Aligned_cols=219 Identities=14% Similarity=0.087 Sum_probs=147.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+... +.+.+++ .+ .+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~----~~~~~~~----------------------~~-~~ 53 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAIAQAFAREG---ALVALCDLRPEG----KEVAEAI----------------------GG-AF 53 (256)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSTTH----HHHHHHH----------------------TC-EE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCChhH----HHHHHHh----------------------hC-CE
Confidence 578999999999999999999999998 678899987643 1111111 13 67
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 54 ~~~D~~~-------~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~ 126 (256)
T 2d1y_A 54 FQVDLED-------ERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV 126 (256)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT
T ss_pred EEeeCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 8999995 33333333 368999999997542 1346778999999999999987642 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... +....|+
T Consensus 127 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 150 (256)
T 2d1y_A 127 GGGAIVNVASVQGLFAE--------------------------------------------------------QENAAYN 150 (256)
T ss_dssp TCEEEEEECCGGGTSBC--------------------------------------------------------TTBHHHH
T ss_pred CCcEEEEEccccccCCC--------------------------------------------------------CCChhHH
Confidence 56899999997543211 1235799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..|.+.+.+ ..++++.+++|+.|.++.... +.............. ........+++++|
T Consensus 151 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~d 218 (256)
T 2d1y_A 151 ASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLE---AIALSPDPERTRRDW---------EDLHALRRLGKPEE 218 (256)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH---HHC--------CHHH---------HTTSTTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhh---ccccccCCHHHHHHH---------HhcCCCCCCcCHHH
Confidence 9999999988765 347999999999987642110 000000000000001 11112235789999
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++.++..... ...++++++.++
T Consensus 219 vA~~~~~l~s~~~~-~~~G~~~~v~gG 244 (256)
T 2d1y_A 219 VAEAVLFLASEKAS-FITGAILPVDGG 244 (256)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCchhc-CCCCCEEEECCC
Confidence 99999988854322 223789999887
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.5e-17 Score=165.27 Aligned_cols=222 Identities=14% Similarity=0.082 Sum_probs=148.7
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+... ..+.+.++ ++.. ..++.+
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G---~~V~~~~r~~~~--~~~~~~~~---------l~~~---------~~~~~~ 61 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGKSMAIRFATEK---AKVVVNYRSKED--EANSVLEE---------IKKV---------GGEAIA 61 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHH---------HHHT---------TCEEEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEcCCChH--HHHHHHHH---------HHhc---------CCceEE
Confidence 679999999999999999999999998 678888883211 11111111 1111 256889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc-c--
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-V-- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~-~-- 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 62 ~~~D~~~-------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 134 (261)
T 1gee_A 62 VKGDVTV-------ESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEN 134 (261)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC
Confidence 9999994 333334443 79999999997543 1346678999999999998887653 1
Q ss_pred C-ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 153 K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 153 ~-l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+ ..++|++||....... +....|
T Consensus 135 ~~~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 158 (261)
T 1gee_A 135 DIKGTVINMSSVHEKIPW--------------------------------------------------------PLFVHY 158 (261)
T ss_dssp TCCCEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred CCCCEEEEeCCHHhcCCC--------------------------------------------------------CCccHH
Confidence 2 5699999997433210 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..|.+++.+ ..+++++++||+.|+++.... + .............. ....+++++
T Consensus 159 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~----~~~~~~~~~~~~~~---------~~~~~~~~~ 222 (261)
T 1gee_A 159 AASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAE---K----FADPEQRADVESMI---------PMGYIGEPE 222 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHH---H----HHSHHHHHHHHTTC---------TTSSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhh---c----ccChhHHHHHHhcC---------CCCCCcCHH
Confidence 99999888887654 348999999999999864311 0 00011111111111 112468999
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++..... ...++++++.++
T Consensus 223 dva~~~~~l~~~~~~-~~~G~~~~v~gg 249 (261)
T 1gee_A 223 EIAAVAAWLASSEAS-YVTGITLFADGG 249 (261)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhCcccc-CCCCcEEEEcCC
Confidence 999999988753222 223789999887
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-17 Score=164.94 Aligned_cols=219 Identities=14% Similarity=0.144 Sum_probs=151.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.| .+|+++.|+.... +.+.++ +++. ..++.+
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G---~~v~~~~r~~~~~---~~~~~~---------~~~~---------~~~~~~ 58 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKG---ATVVGTATSQASA---EKFENS---------MKEK---------GFKARG 58 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESSHHHH---HHHHHH---------HHHT---------TCCEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHH---------HHhc---------CCceEE
Confidence 468999999999999999999999998 6788888865322 122211 1111 257889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|+++ .+..+.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 59 ~~~D~~~-------~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 131 (247)
T 3lyl_A 59 LVLNISD-------IESIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKK 131 (247)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 9999995 333334433 58999999997632 2456778999999999999887652 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... +....|+
T Consensus 132 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 155 (247)
T 3lyl_A 132 RWGRIISIGSVVGSAGN--------------------------------------------------------PGQTNYC 155 (247)
T ss_dssp TCEEEEEECCTHHHHCC--------------------------------------------------------TTCHHHH
T ss_pred CCeEEEEEcchhhccCC--------------------------------------------------------CCcHHHH
Confidence 45689999997644321 1235799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.+ ..++++.+++|+.|.++.....+. ........+ .....+.+++|
T Consensus 156 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---------~~~~~~~~~---------~~~~~~~~~~d 217 (247)
T 3lyl_A 156 AAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTD---------EQKSFIATK---------IPSGQIGEPKD 217 (247)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCH---------HHHHHHHTT---------STTCCCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccH---------HHHHHHhhc---------CCCCCCcCHHH
Confidence 9999888877654 358999999999998875533211 111111111 12245789999
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++.++..... .-.++++++.+|
T Consensus 218 va~~i~~l~s~~~~-~~tG~~i~vdgG 243 (247)
T 3lyl_A 218 IAAAVAFLASEEAK-YITGQTLHVNGG 243 (247)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCCCcC-CccCCEEEECCC
Confidence 99999988753322 223789999887
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.4e-17 Score=163.85 Aligned_cols=214 Identities=11% Similarity=0.126 Sum_probs=145.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||++++++|++.| .+|+++.|+....... .++ ...++.+
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~---~~~---------------------~~~~~~~ 57 (257)
T 3tpc_A 5 LKSRVFIVTGASSGLGAAVTRMLAQEG---ATVLGLDLKPPAGEEP---AAE---------------------LGAAVRF 57 (257)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESSCC------------------------------------CEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCChHHHHHH---HHH---------------------hCCceEE
Confidence 679999999999999999999999999 6788999977543211 101 1256789
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-----------cccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-----------~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
+.+|+++ .+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 58 ~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 130 (257)
T 3tpc_A 58 RNADVTN-------EADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEV 130 (257)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 9999995 333344443 79999999997632 2456778999999999999988763
Q ss_pred -c--------CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhcccccc
Q 008324 152 -V--------KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERA 222 (570)
Q Consensus 152 -~--------~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 222 (570)
. +..++|++||...+...
T Consensus 131 m~~~~~~~~~~~g~iv~isS~~~~~~~----------------------------------------------------- 157 (257)
T 3tpc_A 131 MSQGEPDADGERGVIVNTASIAAFDGQ----------------------------------------------------- 157 (257)
T ss_dssp HTTSCCCTTSCCEEEEEECCTHHHHCC-----------------------------------------------------
T ss_pred HHhccccCCCCCeEEEEEechhhccCC-----------------------------------------------------
Confidence 1 34679999997654321
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCC
Q 008324 223 KLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETK 297 (570)
Q Consensus 223 ~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~ 297 (570)
.....|+.||+..+.+.+.+ ..++++.+++|+.|.++.....+. ......... .
T Consensus 158 ---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~---------~~~~~~~~~---------~ 216 (257)
T 3tpc_A 158 ---IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQ---------DVQDALAAS---------V 216 (257)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-----------------------CC---------S
T ss_pred ---CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCH---------HHHHHHHhc---------C
Confidence 12357999999999887654 358999999999998865432111 000111111 1
Q ss_pred ee-eeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 298 VI-MDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 298 ~~-~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.. ..+...+|+|++++.++.. ..-.++++++.+|
T Consensus 217 p~~~r~~~~~dva~~v~~l~s~---~~itG~~i~vdGG 251 (257)
T 3tpc_A 217 PFPPRLGRAEEYAALVKHICEN---TMLNGEVIRLDGA 251 (257)
T ss_dssp SSSCSCBCHHHHHHHHHHHHHC---TTCCSCEEEESTT
T ss_pred CCCCCCCCHHHHHHHHHHHccc---CCcCCcEEEECCC
Confidence 11 3467899999999998863 2223789999887
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.77 E-value=2e-17 Score=164.13 Aligned_cols=227 Identities=17% Similarity=0.114 Sum_probs=148.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+.. ....+.+. + ...++.+
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G---~~V~~~~r~~~-~~~~~~l~-------------~---------~~~~~~~ 55 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAG---ANIVLNGFGDP-APALAEIA-------------R---------HGVKAVH 55 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEECSSCC-HHHHHHHH-------------T---------TSCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCch-HHHHHHHH-------------h---------cCCceEE
Confidence 468999999999999999999999998 67888888765 11111111 0 0246888
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--c
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~ 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++.+.+.. + .
T Consensus 56 ~~~D~~~-------~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~ 128 (255)
T 2q2v_A 56 HPADLSD-------VAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRAR 128 (255)
T ss_dssp ECCCTTS-------HHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EeCCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 9999994 444445554 79999999997542 244677899999988887776532 1 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+... +....|+
T Consensus 129 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 152 (255)
T 2q2v_A 129 NWGRIINIASVHGLVGS--------------------------------------------------------TGKAAYV 152 (255)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTBHHHH
T ss_pred CCcEEEEEcCchhccCC--------------------------------------------------------CCchhHH
Confidence 56899999998654321 1135799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccc-hHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKT-INTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~-~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
.||+..+.+.+.+ ..+++++++||+.|.++.......-...... ........ .........+++++
T Consensus 153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~p~~~~~~~~ 224 (255)
T 2q2v_A 153 AAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDL--------LAEKQPSLAFVTPE 224 (255)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHH--------HTTTCTTCCCBCHH
T ss_pred HHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHH--------HhccCCCCCCcCHH
Confidence 9999999988765 3479999999999988542110000000000 00000111 01111223578999
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++..... ...+++|++.++
T Consensus 225 dvA~~~~~l~s~~~~-~~tG~~~~vdgG 251 (255)
T 2q2v_A 225 HLGELVLFLCSEAGS-QVRGAAWNVDGG 251 (255)
T ss_dssp HHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhCCccC-CCCCCEEEECCC
Confidence 999999988753322 223789999876
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=5.5e-17 Score=162.62 Aligned_cols=220 Identities=18% Similarity=0.146 Sum_probs=153.6
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
..-++||+++||||+|+||++++++|++.| .+|+++.|+..... ...+++ ..+
T Consensus 6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~---~~~~~~---------------------~~~ 58 (271)
T 3tzq_B 6 TAELENKVAIITGACGGIGLETSRVLARAG---ARVVLADLPETDLA---GAAASV---------------------GRG 58 (271)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECTTSCHH---HHHHHH---------------------CTT
T ss_pred CcCCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEcCCHHHHH---HHHHHh---------------------CCC
Confidence 345789999999999999999999999999 67888988765432 111111 256
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc---------cccHHHHHHHhHHHHHHHHHHHHH
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF---------DERYDVAFGINTLGVIHLVNFAKK 150 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f---------~~~~~~~~~~Nv~gt~~ll~la~~ 150 (570)
+.++.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+..
T Consensus 59 ~~~~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 131 (271)
T 3tzq_B 59 AVHHVVDLTN-------EVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIP 131 (271)
T ss_dssp CEEEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 7889999994 443444444 79999999997622 244677899999999999998832
Q ss_pred c---cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCC
Q 008324 151 C---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (570)
Q Consensus 151 ~---~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 227 (570)
. .+..++|++||...+... ..
T Consensus 132 ~m~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~ 155 (271)
T 3tzq_B 132 RLISAGGGAIVNISSATAHAAY--------------------------------------------------------DM 155 (271)
T ss_dssp HHHHTTCEEEEEECCGGGTSBC--------------------------------------------------------SS
T ss_pred HHHhcCCCEEEEECCHHHcCCC--------------------------------------------------------CC
Confidence 1 256799999997644221 12
Q ss_pred CchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeee
Q 008324 228 PNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDV 302 (570)
Q Consensus 228 ~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
...|+.||+..+.+.+.. ..++++.+++|+.|.++..+. .+ .......+..... ...+
T Consensus 156 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~--~~------~~~~~~~~~~~~~---------~~r~ 218 (271)
T 3tzq_B 156 STAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEV--GL------PQPIVDIFATHHL---------AGRI 218 (271)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC-----------CHHHHHHHHTTST---------TSSC
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccc--cC------CHHHHHHHHhcCC---------CCCC
Confidence 357999999999998765 357999999999999875431 00 1122222222211 1235
Q ss_pred eehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
...+|+|++++.++.+... .-.++++++.+|
T Consensus 219 ~~p~dvA~~v~~L~s~~~~-~itG~~i~vdGG 249 (271)
T 3tzq_B 219 GEPHEIAELVCFLASDRAA-FITGQVIAADSG 249 (271)
T ss_dssp BCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHhCcccC-CcCCCEEEECCC
Confidence 6789999999988864332 223789999887
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=5.4e-17 Score=163.40 Aligned_cols=233 Identities=14% Similarity=0.106 Sum_probs=153.2
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC----------cccHHHHHHHHHhhhhhHHHHHhhhcc
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD----------IDSAALRFQNEVLAKDVFNVLKEKWGT 77 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~----------~~~~~~rl~~~l~~~~~f~~l~~~~~~ 77 (570)
.-++||+++||||+|+||++++++|++.| .+|+++.|... .....+.+.++ ++.
T Consensus 11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~---------~~~---- 74 (280)
T 3pgx_A 11 GSLQGRVAFITGAARGQGRSHAVRLAAEG---ADIIACDICAPVSASVTYAPASPEDLDETARL---------VED---- 74 (280)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEECCSCCCTTCCSCCCCHHHHHHHHHH---------HHT----
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeccccccccccccccCHHHHHHHHHH---------HHh----
Confidence 34789999999999999999999999999 67888888431 11122222211 111
Q ss_pred ccccccCCceEEEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHH
Q 008324 78 RLNSFISEKITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIH 143 (570)
Q Consensus 78 ~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ 143 (570)
...++.++.+|+++ .+..+.++ .++|++||+||.... .+.++..+++|+.|+.+
T Consensus 75 -----~~~~~~~~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~ 142 (280)
T 3pgx_A 75 -----QGRKALTRVLDVRD-------DAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWR 142 (280)
T ss_dssp -----TTCCEEEEECCTTC-------HHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred -----cCCeEEEEEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHH
Confidence 13578899999995 44334443 379999999998642 24567789999999999
Q ss_pred HHHHHHHc----cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccc
Q 008324 144 LVNFAKKC----VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGT 219 (570)
Q Consensus 144 ll~la~~~----~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 219 (570)
+++.+... +.-.++|++||.......
T Consensus 143 ~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------------------------------------------------- 172 (280)
T 3pgx_A 143 TLRATVPAMIEAGNGGSIVVVSSSAGLKAT-------------------------------------------------- 172 (280)
T ss_dssp HHHHHHHHHHHHCSCEEEEEECCGGGTSCC--------------------------------------------------
T ss_pred HHHHHHHHHHhcCCCCEEEEEcchhhccCC--------------------------------------------------
Confidence 99988542 125689999997543211
Q ss_pred cccccCCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeec
Q 008324 220 ERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG 294 (570)
Q Consensus 220 ~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~ 294 (570)
+....|+.||+..+.+.+.+ ..++++.+++|+.|.++..++ ......+.... .....+..
T Consensus 173 ------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~--------~~~~~~~~~~~-~~~~~~~~ 237 (280)
T 3pgx_A 173 ------PGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEP--------EAMMEIFARHP-SFVHSFPP 237 (280)
T ss_dssp ------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCH--------HHHHHHHHHCG-GGGGGSCC
T ss_pred ------CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccch--------hhhhhhhhcCc-hhhhhhhh
Confidence 12357999999999988765 358999999999999875421 00001111000 00000000
Q ss_pred CCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 295 ETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 295 ~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.......+..++|+|++++.++.+...- -.++++++.+|
T Consensus 238 ~~~~~~r~~~p~dvA~~v~~L~s~~~~~-itG~~i~vdGG 276 (280)
T 3pgx_A 238 MPVQPNGFMTADEVADVVAWLAGDGSGT-LTGTQIPVDKG 276 (280)
T ss_dssp BTTBCSSCBCHHHHHHHHHHHHSGGGTT-CSSCEEEESTT
T ss_pred cccCCCCCCCHHHHHHHHHHHhCccccC-CCCCEEEECCC
Confidence 0111124789999999999888643322 23789999876
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=2.3e-17 Score=164.18 Aligned_cols=215 Identities=10% Similarity=0.101 Sum_probs=147.7
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+..... .+.+++ ..++.+
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G---~~V~~~~r~~~~~~---~~~~~~---------------------~~~~~~ 62 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQG---ASAVLLDLPNSGGE---AQAKKL---------------------GNNCVF 62 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECTTSSHH---HHHHHH---------------------CTTEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCcHhHH---HHHHHh---------------------CCceEE
Confidence 679999999999999999999999998 67899999764321 111111 257889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------------cccHHHHHHHhHHHHHHHHHHHH
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------------DERYDVAFGINTLGVIHLVNFAK 149 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------------~~~~~~~~~~Nv~gt~~ll~la~ 149 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++.
T Consensus 63 ~~~D~~~-------~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~ 135 (265)
T 2o23_A 63 APADVTS-------EKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVA 135 (265)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 9999994 443445544 79999999997532 13466789999999999999887
Q ss_pred Hc-c--------CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhcccc
Q 008324 150 KC-V--------KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTE 220 (570)
Q Consensus 150 ~~-~--------~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 220 (570)
.. . +..++|++||...+...
T Consensus 136 ~~~~~~~~~~~~~~~~iv~isS~~~~~~~--------------------------------------------------- 164 (265)
T 2o23_A 136 GEMGQNEPDQGGQRGVIINTASVAAFEGQ--------------------------------------------------- 164 (265)
T ss_dssp HHHTTSCCCTTSCCEEEEEECCTHHHHCC---------------------------------------------------
T ss_pred HHHHhcccccCCCCcEEEEeCChhhcCCC---------------------------------------------------
Confidence 63 1 45789999998654321
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecC
Q 008324 221 RAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGE 295 (570)
Q Consensus 221 ~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~ 295 (570)
.....|+.||+..+.+++.. ..++++++++|+.|.++.....+. . ........ .+.
T Consensus 165 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~------~~~~~~~~----~~~- 225 (265)
T 2o23_A 165 -----VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE---K------VCNFLASQ----VPF- 225 (265)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------------------CHHHHT----CSS-
T ss_pred -----CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCH---H------HHHHHHHc----CCC-
Confidence 12357999999888887654 348999999999998764321110 0 00000010 000
Q ss_pred CCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 296 TKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 296 ~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
...++.++|+|++++.++.. ..-.++++++.++
T Consensus 226 ---~~~~~~~~dva~~~~~l~~~---~~~~G~~i~vdgG 258 (265)
T 2o23_A 226 ---PSRLGDPAEYAHLVQAIIEN---PFLNGEVIRLDGA 258 (265)
T ss_dssp ---SCSCBCHHHHHHHHHHHHHC---TTCCSCEEEESTT
T ss_pred ---cCCCCCHHHHHHHHHHHhhc---CccCceEEEECCC
Confidence 02367899999999988752 2223788998877
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=6.7e-18 Score=168.02 Aligned_cols=222 Identities=16% Similarity=0.119 Sum_probs=150.0
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.++||+|+||||||+||++++++|++.| .+|+++.|+.... +.+. +.++.. ..++.
T Consensus 11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~---------~~l~~~---------~~~~~ 66 (260)
T 2zat_A 11 PLENKVALVTASTDGIGLAIARRLAQDG---AHVVVSSRKQENV---DRTV---------ATLQGE---------GLSVT 66 (260)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHH---------HHHHHT---------TCCEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHH---------HHHHhc---------CCceE
Confidence 3679999999999999999999999998 6788898864221 1111 111111 24688
Q ss_pred EEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHHc--
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC-- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f--------~~~~~~~~~~Nv~gt~~ll~la~~~-- 151 (570)
.+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 67 ~~~~D~~~-------~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~ 139 (260)
T 2zat_A 67 GTVCHVGK-------AEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEME 139 (260)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 89999995 333334433 79999999996431 2346778999999999998887531
Q ss_pred -cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+..++|++||...+... +....
T Consensus 140 ~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 163 (260)
T 2zat_A 140 KRGGGSVLIVSSVGAYHPF--------------------------------------------------------PNLGP 163 (260)
T ss_dssp HTTCEEEEEECCGGGTSCC--------------------------------------------------------TTBHH
T ss_pred HcCCCEEEEEechhhcCCC--------------------------------------------------------CCchh
Confidence 256899999998654321 12357
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..|.+.+.. ..++++++++|+.|.++.... .|.+ . ........+. ....++++
T Consensus 164 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~----~-~~~~~~~~~~---------~~~~~~~~ 227 (260)
T 2zat_A 164 YNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQV--LWMD----K-ARKEYMKESL---------RIRRLGNP 227 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHH--HHSS----H-HHHHHHHHHH---------TCSSCBCG
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchh--cccC----h-HHHHHHHhcC---------CCCCCCCH
Confidence 999999999988765 348999999999998764311 0111 0 0000011100 11246789
Q ss_pred HHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|+|+++..++..... .-.++++++.+|
T Consensus 228 ~dva~~v~~l~s~~~~-~~tG~~~~vdgG 255 (260)
T 2zat_A 228 EDCAGIVSFLCSEDAS-YITGETVVVGGG 255 (260)
T ss_dssp GGGHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHcCcccC-CccCCEEEECCC
Confidence 9999999888753322 123789999988
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.7e-17 Score=164.93 Aligned_cols=220 Identities=11% Similarity=0.112 Sum_probs=152.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||++++++|++.| .+|+++.|+.... +.+.+++ +. ...++.+
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------~~---------~~~~~~~ 65 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAG---ASVVVTDLKSEGA---EAVAAAI---------RQ---------AGGKAIG 65 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHT---CEEEEEESSHHHH---HHHHHHH---------HH---------TTCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hh---------cCCcEEE
Confidence 689999999999999999999999999 6788888864321 2222111 11 1367889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc------cccHHHHHHHhHHHHHHHHHHHHHc---cC
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f------~~~~~~~~~~Nv~gt~~ll~la~~~---~~ 153 (570)
+.+|+++ .+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+
T Consensus 66 ~~~Dv~d-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~ 138 (256)
T 3gaf_A 66 LECNVTD-------EQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG 138 (256)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 9999995 333334433 79999999997542 2456778999999999999987542 24
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||...+... .....|+.
T Consensus 139 ~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 162 (256)
T 3gaf_A 139 GGAILNISSMAGENTN--------------------------------------------------------VRMASYGS 162 (256)
T ss_dssp CEEEEEECCGGGTCCC--------------------------------------------------------TTCHHHHH
T ss_pred CcEEEEEcCHHHcCCC--------------------------------------------------------CCchHHHH
Confidence 5689999997643211 12357999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHH
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..+.+.+.+ ..++++..++|+.|.++.... .. ..........+. ....+..++|+
T Consensus 163 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-------~~-~~~~~~~~~~~~---------p~~r~~~~~dv 225 (256)
T 3gaf_A 163 SKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALAT-------VL-TPEIERAMLKHT---------PLGRLGEAQDI 225 (256)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHH-------HC-CHHHHHHHHTTC---------TTSSCBCHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhh-------cc-CHHHHHHHHhcC---------CCCCCCCHHHH
Confidence 999999998765 347999999999998753211 00 011112222211 12346789999
Q ss_pred HHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|++++.++..... .-.++++++.+|
T Consensus 226 a~~~~~L~s~~~~-~itG~~i~vdgG 250 (256)
T 3gaf_A 226 ANAALFLCSPAAA-WISGQVLTVSGG 250 (256)
T ss_dssp HHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHcCCccc-CccCCEEEECCC
Confidence 9999988863322 223789999988
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.76 E-value=5.3e-17 Score=163.16 Aligned_cols=240 Identities=16% Similarity=0.158 Sum_probs=155.5
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcc------cHHHHHHHHHhhhhhHHHHHhhhcccccc
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID------SAALRFQNEVLAKDVFNVLKEKWGTRLNS 81 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~------~~~~rl~~~l~~~~~f~~l~~~~~~~~~~ 81 (570)
.-++||+|+||||+|+||++++++|++.| .+|+++.|+.... ...+++.+ . .+.+..
T Consensus 9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~-~-----~~~~~~-------- 71 (278)
T 3sx2_A 9 GPLTGKVAFITGAARGQGRAHAVRLAADG---ADIIAVDLCDQIASVPYPLATPEELAA-T-----VKLVED-------- 71 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEECCSCCTTCSSCCCCHHHHHH-H-----HHHHHH--------
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCC---CeEEEEecccccccccccccchHHHHH-H-----HHHHHh--------
Confidence 34789999999999999999999999999 6788888873210 00112221 0 011111
Q ss_pred ccCCceEEEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 82 FISEKITFVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 82 ~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f---~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
...++.++.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 72 -~~~~~~~~~~D~~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 143 (278)
T 3sx2_A 72 -IGSRIVARQADVRD-------RESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPT 143 (278)
T ss_dssp -HTCCEEEEECCTTC-------HHHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred -cCCeEEEEeCCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 13678999999994 443444443 79999999998643 3557788999999999999987652
Q ss_pred ----cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCC
Q 008324 152 ----VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (570)
Q Consensus 152 ----~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 227 (570)
+.-.++|++||........ .+ . +.
T Consensus 144 ~~~~~~~g~iv~isS~~~~~~~~-----------~~-~----------------------------------------~~ 171 (278)
T 3sx2_A 144 LVKQGTGGSIVLISSSAGLAGVG-----------SA-D----------------------------------------PG 171 (278)
T ss_dssp HHHHCSCEEEEEECCGGGTSCCC-----------CS-S----------------------------------------HH
T ss_pred HHhCCCCcEEEEEccHHhcCCCc-----------cC-C----------------------------------------CC
Confidence 1246899999976432210 00 0 01
Q ss_pred CchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHH-HhcCCceeeecCCCeeee
Q 008324 228 PNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVA-SAQGNLRCLVGETKVIMD 301 (570)
Q Consensus 228 ~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~-~~~G~~~~~~~~~~~~~d 301 (570)
...|+.||+..+.+.+.+ ..++++..++|+.|.++..... .....+.. ..........++... ..
T Consensus 172 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~p-~~ 242 (278)
T 3sx2_A 172 SVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNE--------FTREWLAKMAAATDTPGAMGNAMP-VE 242 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSH--------HHHHHHHHHHHHCC--CTTSCSSS-CS
T ss_pred chHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhh--------hHHHHHhhccchhhhhhhhhhhcC-cC
Confidence 246999999999988765 3579999999999988754210 00011111 011111111122222 56
Q ss_pred eeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 302 ~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++.++|+|++++.++..... .-.++++++.+|
T Consensus 243 ~~~p~dvA~~v~~l~s~~~~-~itG~~i~vdGG 274 (278)
T 3sx2_A 243 VLAPEDVANAVAWLVSDQAR-YITGVTLPVDAG 274 (278)
T ss_dssp SBCHHHHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred cCCHHHHHHHHHHHhCcccc-cccCCEEeECCC
Confidence 78999999999988864332 223789999887
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=4.2e-17 Score=160.38 Aligned_cols=196 Identities=15% Similarity=0.171 Sum_probs=138.9
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCc----cEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNV----KKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V----~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
++|+|+||||||+||++++++|++.|..- .+|+++.|+... .+.+.++ ++. ...+
T Consensus 1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~---~~~~~~~---------~~~---------~~~~ 59 (244)
T 2bd0_A 1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAAD---LEKISLE---------CRA---------EGAL 59 (244)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHH---HHHHHHH---------HHT---------TTCE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHH---HHHHHHH---------HHc---------cCCe
Confidence 37899999999999999999999998310 078888886421 1222211 111 0257
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc-
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC- 151 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~- 151 (570)
+.++.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 60 ~~~~~~D~~~-------~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 132 (244)
T 2bd0_A 60 TDTITADISD-------MADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALM 132 (244)
T ss_dssp EEEEECCTTS-------HHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred eeEEEecCCC-------HHHHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 8899999994 333334443 69999999997643 2456778999999999999988542
Q ss_pred --cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc
Q 008324 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (570)
Q Consensus 152 --~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
.+..++|++||...+... ....
T Consensus 133 ~~~~~~~iv~isS~~~~~~~--------------------------------------------------------~~~~ 156 (244)
T 2bd0_A 133 ERQHSGHIFFITSVAATKAF--------------------------------------------------------RHSS 156 (244)
T ss_dssp HHHTCEEEEEECCGGGTSCC--------------------------------------------------------TTCH
T ss_pred HhCCCCEEEEEecchhcCCC--------------------------------------------------------CCCc
Confidence 256899999998654321 1236
Q ss_pred hHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeee
Q 008324 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (570)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.|+.||+..|.+++.. ..+++++++||+.|+++.....+. . . ...+++
T Consensus 157 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~----------------------~--~~~~~~ 209 (244)
T 2bd0_A 157 IYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD---E----------------------M--QALMMM 209 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS---T----------------------T--GGGSBC
T ss_pred hhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccc---c----------------------c--cccCCC
Confidence 7999999999988654 357999999999999875432110 0 0 115689
Q ss_pred hHHHHHHHHHHHH
Q 008324 305 VDMVVNAMIVAMV 317 (570)
Q Consensus 305 VDdva~aii~a~~ 317 (570)
++|+|++++.++.
T Consensus 210 ~~dva~~~~~l~~ 222 (244)
T 2bd0_A 210 PEDIAAPVVQAYL 222 (244)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998885
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.9e-17 Score=164.85 Aligned_cols=224 Identities=20% Similarity=0.181 Sum_probs=150.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.| .+|+++.|+.... +.+. +.+++. ..++.+
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~---------~~~~~~---------~~~~~~ 62 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLG---ASVYTCSRNQKEL---NDCL---------TQWRSK---------GFKVEA 62 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHH---------HHHHHT---------TCEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHH---------HHHHhc---------CCcEEE
Confidence 679999999999999999999999998 6788888864221 1111 111111 246889
Q ss_pred EeccCCCCCCCCCchhhHHHHh--------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---
Q 008324 90 VPGDISSEDLGLKDSNLKEELW--------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~--------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~--- 151 (570)
+.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 63 ~~~D~~~-------~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 135 (260)
T 2ae2_A 63 SVCDLSS-------RSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKA 135 (260)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 9999995 33333444 579999999997532 2456778999999999999988531
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||...+... +....|
T Consensus 136 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 159 (260)
T 2ae2_A 136 SERGNVVFISSVSGALAV--------------------------------------------------------PYEAVY 159 (260)
T ss_dssp TSSEEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred cCCcEEEEEcchhhccCC--------------------------------------------------------CCcchH
Confidence 256899999997543211 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..|.+.+.+ ..++++++++|+.|.++.... +... ......+.....+. ....+++++
T Consensus 160 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~ 226 (260)
T 2ae2_A 160 GATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEM---TIQD-PEQKENLNKLIDRC---------ALRRMGEPK 226 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHH---HTTS-HHHHHHHHHHHHTS---------TTCSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhh---hccC-hhhHHHHHHHHhcC---------CCCCCCCHH
Confidence 99999999998765 347999999999998753210 0000 00001011111111 123478999
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++..... .-.++++++.+|
T Consensus 227 dvA~~v~~l~s~~~~-~~tG~~~~vdgG 253 (260)
T 2ae2_A 227 ELAAMVAFLCFPAAS-YVTGQIIYVDGG 253 (260)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHcCcccc-CCCCCEEEECCC
Confidence 999999988753322 223789999887
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.76 E-value=8.3e-18 Score=166.02 Aligned_cols=219 Identities=14% Similarity=0.169 Sum_probs=147.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+... .+.+.+ +... ..++.+
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~~~G---~~V~~~~r~~~~---~~~~~~-------------~~~~------~~~~~~ 58 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFVEEG---AKVMITGRHSDV---GEKAAK-------------SVGT------PDQIQF 58 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHH-------------HHCC------TTTEEE
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHH-------------Hhhc------cCceEE
Confidence 678999999999999999999999998 678888886421 111111 1110 147889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--c
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~ 152 (570)
+.+|+++ .+..+.+++ .+|+|||+||.... .+.++..+++|+.|+.++.+.+.. + .
T Consensus 59 ~~~D~~~-------~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~ 131 (251)
T 1zk4_A 59 FQHDSSD-------EDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNK 131 (251)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred EECCCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Confidence 9999995 333334443 59999999997532 234677899999998888776543 2 2
Q ss_pred Cc-eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 153 KL-KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 153 ~l-~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+. .++|++||...+... +....|
T Consensus 132 ~~~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 155 (251)
T 1zk4_A 132 GLGASIINMSSIEGFVGD--------------------------------------------------------PSLGAY 155 (251)
T ss_dssp SSCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred CCCCEEEEeCCchhccCC--------------------------------------------------------CCCccc
Confidence 44 799999998654321 123579
Q ss_pred HHHHHHHHHHHHHh-------ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeee
Q 008324 232 VFTKTMGEMLMQQS-------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-------~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
+.||+..|.+++.+ ..+++++++||+.|+++.....+ . ........ .......+++
T Consensus 156 ~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~-------~--~~~~~~~~--------~~~~~~~~~~ 218 (251)
T 1zk4_A 156 NASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP-------G--AEEAMSQR--------TKTPMGHIGE 218 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST-------T--HHHHHTST--------TTCTTSSCBC
T ss_pred hHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcC-------c--hhhhHHHh--------hcCCCCCCcC
Confidence 99999999988754 34799999999999886442211 0 00111000 0011234789
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++|+|++++.++..... ...++++++.+|
T Consensus 219 ~~dva~~~~~l~~~~~~-~~~G~~~~v~gG 247 (251)
T 1zk4_A 219 PNDIAYICVYLASNESK-FATGSEFVVDGG 247 (251)
T ss_dssp HHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHHcCcccc-cccCcEEEECCC
Confidence 99999999988853322 223789999887
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.1e-17 Score=162.45 Aligned_cols=216 Identities=14% Similarity=0.146 Sum_probs=142.3
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEE-EcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE-
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF-VRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF- 89 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~l-vR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~- 89 (570)
+|+|+||||||+||++++++|++.| .+|+++ .|+... .+.+.++ ++.. ..++..
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G---~~v~~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~~ 56 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDG---FALAIHYGQNREK---AEEVAEE---------ARRR---------GSPLVAV 56 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTT---CEEEEEESSCHHH---HHHHHHH---------HHHT---------TCSCEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCCHHH---HHHHHHH---------HHhc---------CCceEEE
Confidence 5799999999999999999999998 577777 565321 1111111 1111 135566
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHH----HHc
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFA----KKC 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la----~~~ 151 (570)
+.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+ ++.
T Consensus 57 ~~~D~~~-------~~~~~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~ 129 (245)
T 2ph3_A 57 LGANLLE-------AEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKA 129 (245)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EeccCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc
Confidence 8999995 33333443 479999999997542 2346677999999966665544 333
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+..++|++||....... +....|
T Consensus 130 -~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y 152 (245)
T 2ph3_A 130 -RFGRIVNITSVVGILGN--------------------------------------------------------PGQANY 152 (245)
T ss_dssp -TCEEEEEECCTHHHHCC--------------------------------------------------------SSBHHH
T ss_pred -CCCEEEEEeChhhccCC--------------------------------------------------------CCCcch
Confidence 67899999997543211 113579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..|.+.+.+ ..+++++++||+.|.++..+..+ .........+. ....+++++
T Consensus 153 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~~~---------~~~~~~~~~ 214 (245)
T 2ph3_A 153 VASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLP---------QEVKEAYLKQI---------PAGRFGRPE 214 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC---------HHHHHHHHHTC---------TTCSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcC---------HHHHHHHHhcC---------CCCCCcCHH
Confidence 99999888887754 34899999999999886432111 11111111111 113468999
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++.... ....+++|++.++
T Consensus 215 dva~~~~~l~~~~~-~~~~G~~~~v~gg 241 (245)
T 2ph3_A 215 EVAEAVAFLVSEKA-GYITGQTLCVDGG 241 (245)
T ss_dssp HHHHHHHHHTSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHHhCccc-ccccCCEEEECCC
Confidence 99999998875322 2223789999886
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.6e-17 Score=166.00 Aligned_cols=234 Identities=15% Similarity=0.107 Sum_probs=149.0
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
-+.||+++||||+|+||++++++|++.| .+|+++.|+... ..+.+.++ +... ...++.
T Consensus 22 ~l~~k~~lVTGas~GIG~~ia~~la~~G---~~V~~~~r~~~~--~~~~~~~~---------~~~~--------~~~~~~ 79 (281)
T 3v2h_A 22 SMMTKTAVITGSTSGIGLAIARTLAKAG---ANIVLNGFGAPD--EIRTVTDE---------VAGL--------SSGTVL 79 (281)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEECCCCHH--HHHHHHHH---------HHTT--------CSSCEE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCChH--HHHHHHHH---------Hhhc--------cCCcEE
Confidence 3678999999999999999999999999 678888874321 11111111 1111 135788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~--- 151 (570)
++.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 80 ~~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~ 152 (281)
T 3v2h_A 80 HHPADMTK-------PSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKK 152 (281)
T ss_dssp EECCCTTC-------HHHHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCC-------HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 99999995 433344443 79999999997532 2446778999999999999987431
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||....... +....|
T Consensus 153 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 176 (281)
T 3v2h_A 153 KGWGRIINIASAHGLVAS--------------------------------------------------------PFKSAY 176 (281)
T ss_dssp HTCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred cCCCEEEEECCcccccCC--------------------------------------------------------CCchHH
Confidence 255789999997543211 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.+ ..++++.+++|+.|.++.............+ .. ..........+......++.++
T Consensus 177 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~p~~r~~~~e 250 (281)
T 3v2h_A 177 VAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRG---IT---EEQVINEVMLKGQPTKKFITVE 250 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------------CCTTCSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcC---CC---HHHHHHHHHHhcCCCCCccCHH
Confidence 99999999988755 3479999999999998754321100000000 00 0000011122233345789999
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++.....- -.++++++.+|
T Consensus 251 dvA~~v~~L~s~~a~~-itG~~i~vdGG 277 (281)
T 3v2h_A 251 QVASLALYLAGDDAAQ-ITGTHVSMDGG 277 (281)
T ss_dssp HHHHHHHHHHSSGGGG-CCSCEEEESTT
T ss_pred HHHHHHHHHcCCCcCC-CCCcEEEECCC
Confidence 9999999888533221 23789999887
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-17 Score=166.70 Aligned_cols=224 Identities=13% Similarity=0.119 Sum_probs=149.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+... .+.+. ++ ...++.+
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~--------~~~~~~~ 62 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKAG---ATVAIADLDVMA---AQAVV-------------AG--------LENGGFA 62 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HT--------CTTCCEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------HH--------HhcCCeE
Confidence 579999999999999999999999998 678888886421 11111 01 1136788
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 63 ~~~D~~d-------~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~ 135 (263)
T 3ak4_A 63 VEVDVTK-------RASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLAS 135 (263)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EEEeCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 9999994 443444444 79999999997542 1346778999999999999988652 1
Q ss_pred C-ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 153 K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 153 ~-l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+ ..++|++||....... +....|
T Consensus 136 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 159 (263)
T 3ak4_A 136 NTKGVIVNTASLAAKVGA--------------------------------------------------------PLLAHY 159 (263)
T ss_dssp TCCCEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred CCCeEEEEecccccccCC--------------------------------------------------------CCchhH
Confidence 3 5789999997543211 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCcc---ccCccchHHHHHHHhcCCceeeecCCCeeeeee
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGW---VEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw---~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
+.||+..|.+.+.+ ..+++++++||+.|.++.......+ ..+. ...........+. ....++
T Consensus 160 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---------p~~~~~ 229 (263)
T 3ak4_A 160 SASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGM-TPEAVRAEYVSLT---------PLGRIE 229 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTS-CHHHHHHHHHHTC---------TTCSCB
T ss_pred HHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhcccccccccc-CcHHHHHHHHhcC---------CCCCCc
Confidence 99999999888765 3489999999999988542110000 0000 0011111111111 123478
Q ss_pred ehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++|+|++++.++..... ...+++|++.+|
T Consensus 230 ~~~dvA~~v~~l~s~~~~-~~tG~~~~vdgG 259 (263)
T 3ak4_A 230 EPEDVADVVVFLASDAAR-FMTGQGINVTGG 259 (263)
T ss_dssp CHHHHHHHHHHHHSGGGT-TCCSCEEEESSS
T ss_pred CHHHHHHHHHHHhCcccc-CCCCCEEEECcC
Confidence 999999999988853322 223789999887
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.8e-17 Score=166.38 Aligned_cols=224 Identities=13% Similarity=0.083 Sum_probs=147.8
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEc-CCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR-AADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR-~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
-++||+|+||||+|+||++++++|++.| .+|+++.| +... .+.+.+ .+++.. ..++
T Consensus 8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~---------~~~~~~--------~~~~ 64 (276)
T 1mxh_A 8 ASECPAAVITGGARRIGHSIAVRLHQQG---FRVVVHYRHSEGA---AQRLVA---------ELNAAR--------AGSA 64 (276)
T ss_dssp ---CCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHH---HHHHHH---------HHHHHS--------TTCE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCChHH---HHHHHH---------HHHHhc--------CCce
Confidence 3689999999999999999999999998 67888888 4321 122211 111110 2468
Q ss_pred EEEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCcc------------------ccHHHHHHHhHHHHH
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKFD------------------ERYDVAFGINTLGVI 142 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f~------------------~~~~~~~~~Nv~gt~ 142 (570)
.++.+|++++.. ..+..+.++ ..+|+|||+||..... +.++..+++|+.|+.
T Consensus 65 ~~~~~Dl~~~~~---~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~ 141 (276)
T 1mxh_A 65 VLCKGDLSLSSS---LLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPL 141 (276)
T ss_dssp EEEECCCSSSTT---HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHH
T ss_pred EEEeccCCCccc---cHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHH
Confidence 899999995310 003333333 3799999999975321 456678999999999
Q ss_pred HHHHHHHHc--cCc------eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHH
Q 008324 143 HLVNFAKKC--VKL------KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFM 214 (570)
Q Consensus 143 ~ll~la~~~--~~l------~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (570)
++++++... .+. .++|++||...+...
T Consensus 142 ~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------------------------------------- 176 (276)
T 1mxh_A 142 FLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPL--------------------------------------------- 176 (276)
T ss_dssp HHHHHHHHTC-------CCCEEEEEECCGGGGSCC---------------------------------------------
T ss_pred HHHHHHHHHHhcCCCCCCCCcEEEEECchhhcCCC---------------------------------------------
Confidence 999998863 233 789999997654321
Q ss_pred hhccccccccCCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCc
Q 008324 215 KNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNL 289 (570)
Q Consensus 215 ~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~ 289 (570)
+....|+.||+..+.+.+.+ ..++++++++|+.|.++ . ..+ ...........
T Consensus 177 -----------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~-~~~---------~~~~~~~~~~~- 233 (276)
T 1mxh_A 177 -----------PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P-AMP---------QETQEEYRRKV- 233 (276)
T ss_dssp -----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S-SSC---------HHHHHHHHTTC-
T ss_pred -----------CCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c-cCC---------HHHHHHHHhcC-
Confidence 12357999999999988765 34899999999999987 2 111 11111222211
Q ss_pred eeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 290 RCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 290 ~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+. ..++..++|+|++++.++..... .-.++++++.+|
T Consensus 234 ---p~----~r~~~~~~dva~~v~~l~s~~~~-~~tG~~~~vdgG 270 (276)
T 1mxh_A 234 ---PL----GQSEASAAQIADAIAFLVSKDAG-YITGTTLKVDGG 270 (276)
T ss_dssp ---TT----TSCCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred ---CC----CCCCCCHHHHHHHHHHHhCcccc-CccCcEEEECCc
Confidence 10 11267899999999988853322 223789999876
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=3.8e-17 Score=163.08 Aligned_cols=221 Identities=14% Similarity=0.139 Sum_probs=149.3
Q ss_pred hcCCCEEEEECCc--chhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 9 FLENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 9 ~~~~k~VlITGaT--GFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
.++||+|+||||+ |+||++++++|++.| .+|+++.|+.+.....+.+. ++. ..
T Consensus 6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~l~-------------~~~---------~~ 60 (265)
T 1qsg_A 6 FLSGKRILVTGVASKLSIAYGIAQAMHREG---AELAFTYQNDKLKGRVEEFA-------------AQL---------GS 60 (265)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTT---CEEEEEESSTTTHHHHHHHH-------------HHT---------TC
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHCC---CEEEEEcCcHHHHHHHHHHH-------------Hhc---------CC
Confidence 3679999999999 999999999999998 67889999763222222211 111 23
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc------------cccHHHHHHHhHHHHHHHHHH
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF------------DERYDVAFGINTLGVIHLVNF 147 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f------------~~~~~~~~~~Nv~gt~~ll~l 147 (570)
..++.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.+++++
T Consensus 61 ~~~~~~D~~~-------~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~ 133 (265)
T 1qsg_A 61 DIVLQCDVAE-------DASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKA 133 (265)
T ss_dssp CCEEECCTTC-------HHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred cEEEEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHH
Confidence 3678999995 333334443 68999999997541 134567899999999999999
Q ss_pred HHHc-cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCC
Q 008324 148 AKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHG 226 (570)
Q Consensus 148 a~~~-~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 226 (570)
+... .+-.++|++||...+... +
T Consensus 134 ~~~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~ 157 (265)
T 1qsg_A 134 CRSMLNPGSALLTLSYLGAERAI--------------------------------------------------------P 157 (265)
T ss_dssp HGGGEEEEEEEEEEECGGGTSBC--------------------------------------------------------T
T ss_pred HHHHhccCCEEEEEcchhhccCC--------------------------------------------------------C
Confidence 9763 222589999996543211 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeee
Q 008324 227 WPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMD 301 (570)
Q Consensus 227 ~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d 301 (570)
....|+.||+..|.+.+.+ ..++++.+++|+.|.++.....+ ...........+.. ...
T Consensus 158 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-------~~~~~~~~~~~~~p---------~~~ 221 (265)
T 1qsg_A 158 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK-------DFRKMLAHCEAVTP---------IRR 221 (265)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST-------THHHHHHHHHHHST---------TSS
T ss_pred CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhccc-------ccHHHHHHHHhcCC---------CCC
Confidence 2357999999999998765 34799999999999987542211 11111111111110 113
Q ss_pred eeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 302 ~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+.+++|+|++++.++..... .-.+++|++.++
T Consensus 222 ~~~~~dva~~v~~l~s~~~~-~~tG~~~~vdgG 253 (265)
T 1qsg_A 222 TVTIEDVGNSAAFLCSDLSA-GISGEVVHVDGG 253 (265)
T ss_dssp CCCHHHHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred CCCHHHHHHHHHHHhCchhc-CccCCEEEECCC
Confidence 56899999999988753322 223789999887
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.1e-17 Score=164.67 Aligned_cols=220 Identities=18% Similarity=0.156 Sum_probs=148.6
Q ss_pred cCCCEEEEECCc--chhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 10 LENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaT--GFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||+|+||||+ |+||++++++|++.| .+|+++.|+.......+.+ .++. .++
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~l-------------~~~~---------~~~ 73 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREG---AQLAFTYATPKLEKRVREI-------------AKGF---------GSD 73 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTT---CEEEEEESSGGGHHHHHHH-------------HHHT---------TCC
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHH-------------HHhc---------CCe
Confidence 678999999999 999999999999998 6788998876321111111 1111 236
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-----------cccHHHHHHHhHHHHHHHHHHHH
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAK 149 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-----------~~~~~~~~~~Nv~gt~~ll~la~ 149 (570)
.++.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++.
T Consensus 74 ~~~~~Dl~~-------~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 146 (285)
T 2p91_A 74 LVVKCDVSL-------DEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELL 146 (285)
T ss_dssp CEEECCTTC-------HHHHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred EEEEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 788999995 333334433 68999999997532 13466789999999999999987
Q ss_pred Hc-c-CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCC
Q 008324 150 KC-V-KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (570)
Q Consensus 150 ~~-~-~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 227 (570)
.. . +-.++|++||....... +.
T Consensus 147 ~~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~ 170 (285)
T 2p91_A 147 PLMEGRNGAIVTLSYYGAEKVV--------------------------------------------------------PH 170 (285)
T ss_dssp GGGTTSCCEEEEEECGGGTSBC--------------------------------------------------------TT
T ss_pred HHHHHcCCEEEEEccchhccCC--------------------------------------------------------CC
Confidence 63 1 23689999996543211 12
Q ss_pred CchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeee
Q 008324 228 PNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDV 302 (570)
Q Consensus 228 ~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
...|+.||+..+.+++.+ ..++++++++|+.|.++.....+. ..........+.. ...+
T Consensus 171 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-------~~~~~~~~~~~~p---------~~~~ 234 (285)
T 2p91_A 171 YNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITG-------FHLLMEHTTKVNP---------FGKP 234 (285)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTT-------HHHHHHHHHHHST---------TSSC
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccc-------hHHHHHHHHhcCC---------CCCC
Confidence 357999999999988765 348999999999999875432111 1111111111110 0125
Q ss_pred eehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.+++|+|++++.++..... .-.+++|++.++
T Consensus 235 ~~~~dva~~~~~l~s~~~~-~~tG~~~~vdgg 265 (285)
T 2p91_A 235 ITIEDVGDTAVFLCSDWAR-AITGEVVHVDNG 265 (285)
T ss_dssp CCHHHHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHcCCccc-CCCCCEEEECCC
Confidence 6799999999988753322 223788999887
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.75 E-value=2e-17 Score=163.78 Aligned_cols=217 Identities=18% Similarity=0.167 Sum_probs=127.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.| .+|+++.|+.... +.+.++ +++. ..++.+
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G---~~V~~~~r~~~~~---~~~~~~---------~~~~---------~~~~~~ 62 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREG---AAVVVADINAEAA---EAVAKQ---------IVAD---------GGTAIS 62 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHH---------HHHT---------TCEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEcCCHHHH---HHHHHH---------HHhc---------CCcEEE
Confidence 579999999999999999999999998 6788888864321 222211 1111 257889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCC----------ccccHHHHHHHhHHHHHHHHHHHHHc-
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITK----------FDERYDVAFGINTLGVIHLVNFAKKC- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~----------f~~~~~~~~~~Nv~gt~~ll~la~~~- 151 (570)
+.+|+++ .+..+.+++ ++|+|||+||... ..+.++..+++|+.|+.++.+.+...
T Consensus 63 ~~~D~~~-------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~ 135 (253)
T 3qiv_A 63 VAVDVSD-------PESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKM 135 (253)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 9999995 333344443 7999999999731 12446778999999977776655431
Q ss_pred --cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc
Q 008324 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (570)
Q Consensus 152 --~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
.+..++|++||...+. ...
T Consensus 136 ~~~~~g~iv~isS~~~~~-----------------------------------------------------------~~~ 156 (253)
T 3qiv_A 136 TKRGGGAIVNQSSTAAWL-----------------------------------------------------------YSN 156 (253)
T ss_dssp HHHTCEEEEEECC-------------------------------------------------------------------
T ss_pred HhcCCCEEEEECCccccC-----------------------------------------------------------CCc
Confidence 2567899999976541 124
Q ss_pred hHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeee
Q 008324 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (570)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.|+.||+..|.+++.+ ..++++.+++|+.|.++...... .......+..+ .....+..
T Consensus 157 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~ 219 (253)
T 3qiv_A 157 YYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTT--------PKEMVDDIVKG---------LPLSRMGT 219 (253)
T ss_dssp ---CCHHHHHHHHHHHHHHTTTTTEEEEEEEC------------------------------------------------
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcC--------cHHHHHHHhcc---------CCCCCCCC
Confidence 5999999998888755 34799999999999987542110 00111111111 11234556
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++|+|++++.++..... .-.+++|++.+|
T Consensus 220 ~~dva~~~~~l~s~~~~-~~tG~~~~vdgG 248 (253)
T 3qiv_A 220 PDDLVGMCLFLLSDEAS-WITGQIFNVDGG 248 (253)
T ss_dssp CCHHHHHHHHHHSGGGT-TCCSCEEEC---
T ss_pred HHHHHHHHHHHcCcccc-CCCCCEEEECCC
Confidence 89999999988853322 223789999887
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.8e-17 Score=164.79 Aligned_cols=220 Identities=17% Similarity=0.158 Sum_probs=142.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.| .+|+++.|+.... +++. ++. ..++.+
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~G---~~V~~~~r~~~~~---~~~~-------------~~~--------~~~~~~ 59 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKGG---AKVVIVDRDKAGA---ERVA-------------GEI--------GDAALA 59 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHH-------------HHH--------CTTEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCHHHH---HHHH-------------HHh--------CCceEE
Confidence 578999999999999999999999998 6789998864321 1211 111 357889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHHc-c-
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC-V- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f--------~~~~~~~~~~Nv~gt~~ll~la~~~-~- 152 (570)
+.+|+++ .+..+.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 60 ~~~D~~~-------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 132 (261)
T 3n74_A 60 VAADISK-------EADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKE 132 (261)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEecCCC-------HHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 9999995 333334443 68999999997541 2446677999999999998887543 1
Q ss_pred -----CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCC
Q 008324 153 -----KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (570)
Q Consensus 153 -----~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 227 (570)
...++|++||...+... +.
T Consensus 133 ~~~~~~~~~iv~isS~~~~~~~--------------------------------------------------------~~ 156 (261)
T 3n74_A 133 NGAKGQECVILNVASTGAGRPR--------------------------------------------------------PN 156 (261)
T ss_dssp HHHTTCCEEEEEECCTTTTSCC--------------------------------------------------------TT
T ss_pred cCCCCCCeEEEEeCchhhcCCC--------------------------------------------------------CC
Confidence 13469999987543211 12
Q ss_pred CchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeee
Q 008324 228 PNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDV 302 (570)
Q Consensus 228 ~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
...|+.||+..+.+.+.+ ..++++..++|+.|.++......+ . ...... ....+......+
T Consensus 157 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~--~~~~~~---------~~~~~~~~~~~~ 222 (261)
T 3n74_A 157 LAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMG---E--DSEEIR---------KKFRDSIPMGRL 222 (261)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------------------------CTTSSC
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcc---c--CcHHHH---------HHHhhcCCcCCC
Confidence 356999999999988765 357999999999998865432111 0 000000 011111122357
Q ss_pred eehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+.++|+|++++.++.... ..-.++++++.+|
T Consensus 223 ~~~~dva~~~~~l~s~~~-~~itG~~i~vdgG 253 (261)
T 3n74_A 223 LKPDDLAEAAAFLCSPQA-SMITGVALDVDGG 253 (261)
T ss_dssp CCHHHHHHHHHHHTSGGG-TTCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHcCCcc-cCcCCcEEEecCC
Confidence 889999999998875332 2234889999988
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.8e-17 Score=165.41 Aligned_cols=223 Identities=14% Similarity=0.046 Sum_probs=152.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.| .+|+++.|+.... +.+.++ +++. -..++.+
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~---~~~~~~---------l~~~--------~~~~~~~ 64 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAG---ANVAVAGRSTADI---DACVAD---------LDQL--------GSGKVIG 64 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHH---------HHTT--------SSSCEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHH---------HHhh--------CCCcEEE
Confidence 679999999999999999999999999 6788888865321 111111 1111 0257889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|+++ .+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 65 ~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~ 137 (262)
T 3pk0_A 65 VQTDVSD-------RAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIAS 137 (262)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 9999995 343344433 79999999997532 2456778999999999999987653 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...... + . +....|+
T Consensus 138 ~~g~iv~isS~~~~~~--~------~-----------------------------------------------~~~~~Y~ 162 (262)
T 3pk0_A 138 GSGRVVLTSSITGPIT--G------Y-----------------------------------------------PGWSHYG 162 (262)
T ss_dssp SSCEEEEECCSBTTTB--C------C-----------------------------------------------TTCHHHH
T ss_pred CCcEEEEEechhhccC--C------C-----------------------------------------------CCChhhH
Confidence 5678999999753210 0 0 1235799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.+ ..++++.+++|+.|.++..... ............. ...+...+|
T Consensus 163 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---------~~~~~~~~~~~~p---------~~r~~~p~d 224 (262)
T 3pk0_A 163 ATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN---------GEEYIASMARSIP---------AGALGTPED 224 (262)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT---------CHHHHHHHHTTST---------TSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc---------CHHHHHHHHhcCC---------CCCCcCHHH
Confidence 9999999998765 3589999999999988633110 1112222222211 123567899
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCCCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSSLR 336 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~~ 336 (570)
+|++++.++..... .-.++++++.+|..
T Consensus 225 va~~v~~L~s~~~~-~itG~~i~vdGG~~ 252 (262)
T 3pk0_A 225 IGHLAAFLATKEAG-YITGQAIAVDGGQV 252 (262)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTTTT
T ss_pred HHHHHHHHhCcccc-CCcCCEEEECCCee
Confidence 99999988864332 22378999988843
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=3.3e-17 Score=162.62 Aligned_cols=216 Identities=13% Similarity=0.053 Sum_probs=145.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+... .+.+. ++. ..++.+
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~ 55 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAG---ARVVLADVLDEE---GAATA-------------REL--------GDAARY 55 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HTT--------GGGEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------HHh--------CCceeE
Confidence 579999999999999999999999998 678888886421 11111 110 146788
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--c
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~ 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+..+.+.+.. + .
T Consensus 56 ~~~D~~~-------~~~~~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 128 (254)
T 1hdc_A 56 QHLDVTI-------EEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA 128 (254)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 9999994 333344443 79999999997542 234677899999999866554432 1 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+... +....|+
T Consensus 129 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 152 (254)
T 1hdc_A 129 GGGSIVNISSAAGLMGL--------------------------------------------------------ALTSSYG 152 (254)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHHH
T ss_pred CCCEEEEECchhhccCC--------------------------------------------------------CCchhHH
Confidence 56899999998654321 1235799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeee-ehH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI-PVD 306 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V-pVD 306 (570)
.||+..|.+.+.. ..+++++++||+.|.++.....+ ......+. .......+. +.+
T Consensus 153 asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----------------~~~~~~~~-~~~p~~~~~~~~~ 214 (254)
T 1hdc_A 153 ASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETG-----------------IRQGEGNY-PNTPMGRVGNEPG 214 (254)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHT-----------------CCCSTTSC-TTSTTSSCB-CHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccc-----------------hhHHHHHH-hcCCCCCCCCCHH
Confidence 9999999988765 35799999999999885321100 00000000 000112356 899
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++..... .-.++++++.++
T Consensus 215 dvA~~v~~l~s~~~~-~~tG~~~~vdgG 241 (254)
T 1hdc_A 215 EIAGAVVKLLSDTSS-YVTGAELAVDGG 241 (254)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhCchhc-CCCCCEEEECCC
Confidence 999999988853322 223789999887
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.75 E-value=3.4e-17 Score=164.44 Aligned_cols=220 Identities=12% Similarity=0.086 Sum_probs=149.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||++++++|++.| .+|+++.|+... +...+++ .. ...++.+
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~----~~~~~~~---------~~---------~~~~~~~ 83 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAG---AHVLAWGRTDGV----KEVADEI---------AD---------GGGSAEA 83 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSTHH----HHHHHHH---------HT---------TTCEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEcCHHHH----HHHHHHH---------Hh---------cCCcEEE
Confidence 679999999999999999999999999 577888875322 1211111 11 1357889
Q ss_pred EeccCCCCCCCCCchhhHHHHh------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---cC
Q 008324 90 VPGDISSEDLGLKDSNLKEELW------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~ 153 (570)
+.+|++++ +..+.+. .++|+|||+||.... .+.++..+++|+.|+.++++.+... .+
T Consensus 84 ~~~Dv~d~-------~~v~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~ 156 (273)
T 3uf0_A 84 VVADLADL-------EGAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG 156 (273)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EEecCCCH-------HHHHHHHHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 99999953 3232332 379999999998642 2446778999999999999987431 25
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||....... +....|+.
T Consensus 157 ~g~IV~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 180 (273)
T 3uf0_A 157 SGRIVTIASMLSFQGG--------------------------------------------------------RNVAAYAA 180 (273)
T ss_dssp CEEEEEECCGGGTSCC--------------------------------------------------------SSCHHHHH
T ss_pred CCEEEEEcchHhcCCC--------------------------------------------------------CCChhHHH
Confidence 6789999997544211 12357999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHH
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..+.+.+.+ ..++++..++|+.|.++..... ............+. ....+..++|+
T Consensus 181 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~~---------p~~r~~~pedv 244 (273)
T 3uf0_A 181 SKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAAL-------RADDERAAEITARI---------PAGRWATPEDM 244 (273)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH-------HTSHHHHHHHHHHS---------TTSSCBCGGGG
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhc-------ccCHHHHHHHHhcC---------CCCCCCCHHHH
Confidence 999999988765 3589999999999988643211 00111111111111 11245678999
Q ss_pred HHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|++++.++..... .-.++++++.+|
T Consensus 245 a~~v~~L~s~~a~-~itG~~i~vdGG 269 (273)
T 3uf0_A 245 VGPAVFLASDAAS-YVHGQVLAVDGG 269 (273)
T ss_dssp HHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHhCchhc-CCcCCEEEECcC
Confidence 9999988864332 223789999887
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=9.6e-17 Score=159.97 Aligned_cols=212 Identities=12% Similarity=0.138 Sum_probs=145.9
Q ss_pred HHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 008324 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
....+++|+|+||||||+||++++++|++.|....+|+++.|+.......+.+. +. ..
T Consensus 15 ~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~-------------~~---------~~ 72 (267)
T 1sny_A 15 VPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLA-------------KN---------HS 72 (267)
T ss_dssp -----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHH-------------HH---------CT
T ss_pred cccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhh-------------cc---------CC
Confidence 345578999999999999999999999998744457899999875543222211 11 25
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhC---------CccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHH
Q 008324 86 KITFVPGDISSEDLGLKDSNLKEELWN---------ELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFA 148 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l~~---------~vdiViH~AA~v~----f----~~~~~~~~~~Nv~gt~~ll~la 148 (570)
++.++.+|++++ +..+.+++ ++|+|||+||... + .+.++..+++|+.|+.++++++
T Consensus 73 ~~~~~~~Dl~~~-------~~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 145 (267)
T 1sny_A 73 NIHILEIDLRNF-------DAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKAC 145 (267)
T ss_dssp TEEEEECCTTCG-------GGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred ceEEEEecCCCh-------HHHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHH
Confidence 788999999953 33334443 7999999999754 1 2446678999999999999988
Q ss_pred HHc-c--------C-----ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHH
Q 008324 149 KKC-V--------K-----LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFM 214 (570)
Q Consensus 149 ~~~-~--------~-----l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (570)
... . + ..++|++||...+.... ..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------~~------------------------------------ 183 (267)
T 1sny_A 146 LPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGN------TD------------------------------------ 183 (267)
T ss_dssp HHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTC------CS------------------------------------
T ss_pred HHHHhhcccccccccccCCCceEEEEecccccccCC------CC------------------------------------
Confidence 653 1 1 46899999986653211 00
Q ss_pred hhccccccccCCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCc
Q 008324 215 KNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNL 289 (570)
Q Consensus 215 ~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~ 289 (570)
.....|+.||+..|.+++.+ ..+++++++||+.|.++...+
T Consensus 184 -----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------------------- 229 (267)
T 1sny_A 184 -----------GGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS----------------------- 229 (267)
T ss_dssp -----------CCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-----------------------
T ss_pred -----------CCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-----------------------
Confidence 12357999999999998765 358999999999987653210
Q ss_pred eeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecC
Q 008324 290 RCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGS 333 (570)
Q Consensus 290 ~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s 333 (570)
...+..+++|+.++.++...... ..+..+++.+
T Consensus 230 ----------~~~~~~~~~a~~~~~~~~~~~~~-~~G~~~~~~g 262 (267)
T 1sny_A 230 ----------SAPLDVPTSTGQIVQTISKLGEK-QNGGFVNYDG 262 (267)
T ss_dssp ----------TCSBCHHHHHHHHHHHHHHCCGG-GTTCEECTTS
T ss_pred ----------CCCCCHHHHHHHHHHHHHhcCcC-CCCcEEccCC
Confidence 02367899999999988643221 1255555433
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=2.2e-17 Score=166.03 Aligned_cols=225 Identities=15% Similarity=0.095 Sum_probs=149.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+.... +.+. +.+++. ..++.+
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~---------~~l~~~---------~~~~~~ 75 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEG---LRVFVCARGEEGL---RTTL---------KELREA---------GVEADG 75 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHH---------HHHHHT---------TCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHH---------HHHHhc---------CCceEE
Confidence 678999999999999999999999998 6788888864221 1111 111111 256889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc----
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---- 151 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 76 ~~~Dv~~-------~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~ 148 (277)
T 2rhc_B 76 RTCDVRS-------VPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGML 148 (277)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHH
T ss_pred EECCCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHh
Confidence 9999995 333334433 69999999997532 2346778999999999999988653
Q ss_pred -cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+..++|++||....... .....
T Consensus 149 ~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 172 (277)
T 2rhc_B 149 ERGTGRIVNIASTGGKQGV--------------------------------------------------------VHAAP 172 (277)
T ss_dssp HHTEEEEEEECCGGGTSCC--------------------------------------------------------TTCHH
T ss_pred hcCCeEEEEECccccccCC--------------------------------------------------------CCCcc
Confidence 245799999997543210 12357
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccc-----hHHHHHHHhcCCceeeecCCCeee
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKT-----INTLFVASAQGNLRCLVGETKVIM 300 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~-----~~~~i~~~~~G~~~~~~~~~~~~~ 300 (570)
|+.||+..|.+.+.+ ..+++++++||+.|.++..... ...... ..........+. ...
T Consensus 173 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---------p~~ 240 (277)
T 2rhc_B 173 YSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASV---REHYSDIWEVSTEEAFDRITARV---------PIG 240 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHH---HHHHHHHHTCCHHHHHHHHHHHS---------TTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhh---hhhcccccccchHHHHHHHHhcC---------CCC
Confidence 999999999988765 3479999999999987532110 000000 001111111110 113
Q ss_pred eeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 301 d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.++.++|+|++++.++..... ...++++++.+|
T Consensus 241 r~~~~~dvA~~v~~l~s~~~~-~~tG~~~~vdGG 273 (277)
T 2rhc_B 241 RYVQPSEVAEMVAYLIGPGAA-AVTAQALNVCGG 273 (277)
T ss_dssp SCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhCchhc-CCCCcEEEECCC
Confidence 478999999999988753322 223789999887
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.1e-17 Score=164.34 Aligned_cols=223 Identities=16% Similarity=0.152 Sum_probs=142.6
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEE-cCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV-RAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lv-R~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
...++|+|+||||+|+||++++++|++.| .+|+++. |+... .+.+.++ +.+ ...+
T Consensus 22 ~m~~~k~vlITGas~gIG~a~a~~l~~~G---~~V~~~~~~~~~~---~~~~~~~---------~~~---------~~~~ 77 (272)
T 4e3z_A 22 SMSDTPVVLVTGGSRGIGAAVCRLAARQG---WRVGVNYAANREA---ADAVVAA---------ITE---------SGGE 77 (272)
T ss_dssp --CCSCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCHHH---HHHHHHH---------HHH---------TTCE
T ss_pred hccCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCChhH---HHHHHHH---------HHh---------cCCc
Confidence 34568899999999999999999999999 5666663 43221 1222211 111 1357
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f--------~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
+.++.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 78 ~~~~~~Dl~~-------~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 150 (272)
T 4e3z_A 78 AVAIPGDVGN-------AADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRR 150 (272)
T ss_dssp EEEEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred EEEEEcCCCC-------HHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 8899999995 33333443 368999999997643 2346778999999999999888653
Q ss_pred -c-----CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccC
Q 008324 152 -V-----KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLH 225 (570)
Q Consensus 152 -~-----~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 225 (570)
. +..++|++||........
T Consensus 151 ~~~~~~~~~g~iv~isS~~~~~~~~------------------------------------------------------- 175 (272)
T 4e3z_A 151 MSRLYSGQGGAIVNVSSMAAILGSA------------------------------------------------------- 175 (272)
T ss_dssp HCGGGTCCCEEEEEECCTHHHHCCT-------------------------------------------------------
T ss_pred HHHhccCCCCEEEEEcchHhccCCC-------------------------------------------------------
Confidence 1 346899999976543211
Q ss_pred CCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeee
Q 008324 226 GWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIM 300 (570)
Q Consensus 226 ~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~ 300 (570)
+....|+.||+..|.+++.+ ..++++++++|+.|.++..... ...........+ ....
T Consensus 176 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~---------~~~~ 238 (272)
T 4e3z_A 176 TQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASG--------GLPDRAREMAPS---------VPMQ 238 (272)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC--------------------------C---------CTTS
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCccccc--------CChHHHHHHhhc---------CCcC
Confidence 11346999999999987754 3489999999999988654210 000001111111 1122
Q ss_pred eeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 301 d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.+..++|+|++++.++..... .-.+++|++.+|
T Consensus 239 ~~~~~edvA~~i~~l~s~~~~-~~tG~~i~vdgG 271 (272)
T 4e3z_A 239 RAGMPEEVADAILYLLSPSAS-YVTGSILNVSGG 271 (272)
T ss_dssp SCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhCCccc-cccCCEEeecCC
Confidence 345789999999998853332 223789999876
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.2e-16 Score=161.35 Aligned_cols=219 Identities=14% Similarity=0.137 Sum_probs=146.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+... .+.+.++ +++. ..++.+
T Consensus 42 l~~k~vlITGasggIG~~la~~L~~~G---~~V~~~~r~~~~---~~~~~~~---------l~~~---------~~~~~~ 97 (285)
T 2c07_A 42 GENKVALVTGAGRGIGREIAKMLAKSV---SHVICISRTQKS---CDSVVDE---------IKSF---------GYESSG 97 (285)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTS---SEEEEEESSHHH---HHHHHHH---------HHTT---------TCCEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHcC---CEEEEEcCCHHH---HHHHHHH---------HHhc---------CCceeE
Confidence 568999999999999999999999988 677887775322 1111111 1110 256889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 98 ~~~Dl~d-------~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 170 (285)
T 2c07_A 98 YAGDVSK-------KEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN 170 (285)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred EECCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC
Confidence 9999994 34344443 469999999997642 2356778999999988888877531 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 171 ~~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 194 (285)
T 2c07_A 171 RYGRIINISSIVGLTGN--------------------------------------------------------VGQANYS 194 (285)
T ss_dssp TCEEEEEECCTHHHHCC--------------------------------------------------------TTCHHHH
T ss_pred CCCEEEEECChhhccCC--------------------------------------------------------CCCchHH
Confidence 56899999997543221 1135799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..|.+++.+ ..+++++++||+.|.++.....+ ........... + ...+++++|
T Consensus 195 asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~~~----~-----~~~~~~~~d 256 (285)
T 2c07_A 195 SSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS---------EQIKKNIISNI----P-----AGRMGTPEE 256 (285)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC---------HHHHHHHHTTC----T-----TSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcC---------HHHHHHHHhhC----C-----CCCCCCHHH
Confidence 9999998887754 34899999999999886442211 11111121111 1 123789999
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++.++..... ...++++++.+|
T Consensus 257 vA~~~~~l~~~~~~-~~~G~~i~v~gG 282 (285)
T 2c07_A 257 VANLACFLSSDKSG-YINGRVFVIDGG 282 (285)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCCCcC-CCCCCEEEeCCC
Confidence 99999988753322 223789999876
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.75 E-value=4.5e-17 Score=162.24 Aligned_cols=221 Identities=12% Similarity=0.139 Sum_probs=148.6
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+|+|+||||+|+||++++++|++.| .+|+++.|..... .+.+.+ .+ +. ...++.++
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G---~~v~~~~~~~~~~--~~~~~~-~~---------~~--------~~~~~~~~ 62 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKG---YSVTVTYHSDTTA--METMKE-TY---------KD--------VEERLQFV 62 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCHHH--HHHHHH-HT---------GG--------GGGGEEEE
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCC---CEEEEEcCCChHH--HHHHHH-HH---------Hh--------cCCceEEE
Confidence 57999999999999999999999998 6778887765321 122221 10 00 12578999
Q ss_pred eccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccC--C---c----cccHHHHHHHhHHHHHHHHHHHH----H
Q 008324 91 PGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAIT--K---F----DERYDVAFGINTLGVIHLVNFAK----K 150 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v--~---f----~~~~~~~~~~Nv~gt~~ll~la~----~ 150 (570)
.+|+++ .+..+.+++ ++|+|||+||.. . + .+.++..+++|+.|+.++++.+. +
T Consensus 63 ~~Dl~~-------~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 135 (264)
T 3i4f_A 63 QADVTK-------KEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRK 135 (264)
T ss_dssp ECCTTS-------HHHHHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EecCCC-------HHHHHHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHh
Confidence 999995 443444443 799999999942 1 1 24467789999999999999883 3
Q ss_pred ccCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 151 CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 151 ~~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
. +..++|++||..+.+... . .....
T Consensus 136 ~-~~g~iv~iss~~~~~~~~-------~-----------------------------------------------~~~~~ 160 (264)
T 3i4f_A 136 Q-NFGRIINYGFQGADSAPG-------W-----------------------------------------------IYRSA 160 (264)
T ss_dssp H-TCEEEEEECCTTGGGCCC-------C-----------------------------------------------TTCHH
T ss_pred c-CCCeEEEEeechhcccCC-------C-----------------------------------------------CCCch
Confidence 2 567899999874432111 0 12357
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..+.+++.+ ..++++.+++|+.|.++...... ....... ........+..+
T Consensus 161 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~---------~~~~p~~r~~~~ 222 (264)
T 3i4f_A 161 FAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATI---------QEARQLK---------EHNTPIGRSGTG 222 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCH---------HHHHHC-----------------CCCCH
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhcc---------HHHHHHH---------hhcCCCCCCcCH
Confidence 999999999988754 35899999999999987543211 0111000 111122346789
Q ss_pred HHHHHHHHHHHHHhhCCCCCCceEEecCCC
Q 008324 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (570)
+|+|++++.++..... .-.++++++.+|.
T Consensus 223 ~dva~~v~~l~s~~~~-~itG~~i~vdGG~ 251 (264)
T 3i4f_A 223 EDIARTISFLCEDDSD-MITGTIIEVTGAV 251 (264)
T ss_dssp HHHHHHHHHHHSGGGT-TCCSCEEEESCSC
T ss_pred HHHHHHHHHHcCcccC-CCCCcEEEEcCce
Confidence 9999999988864332 2237899999883
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.1e-16 Score=158.48 Aligned_cols=219 Identities=13% Similarity=0.107 Sum_probs=140.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+.... ...+.+
T Consensus 5 l~~k~vlVTGas~giG~~ia~~l~~~G---~~V~~~~r~~~~~-------------------------------~~~~~~ 50 (250)
T 2fwm_X 5 FSGKNVWVTGAGKGIGYATALAFVEAG---AKVTGFDQAFTQE-------------------------------QYPFAT 50 (250)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCCCSS-------------------------------CCSSEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCchhhh-------------------------------cCCceE
Confidence 578999999999999999999999998 6788998875311 012678
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--c
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~ 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++.. + .
T Consensus 51 ~~~D~~d-------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~ 123 (250)
T 2fwm_X 51 EVMDVAD-------AAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQ 123 (250)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhc
Confidence 8999994 443444443 79999999997542 245778899999999999998842 1 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+... +....|+
T Consensus 124 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 147 (250)
T 2fwm_X 124 RGGAIVTVASDAAHTPR--------------------------------------------------------IGMSAYG 147 (250)
T ss_dssp TCCEEEEECCGGGTSCC--------------------------------------------------------TTCHHHH
T ss_pred CCCEEEEECchhhCCCC--------------------------------------------------------CCCchHH
Confidence 56799999997654211 1235799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..|.+.+.. ..+++++++||+.|.++....... .+.. ....+...... .........+...+|
T Consensus 148 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~--~~~~~~~~~~~-----~~~~~p~~~~~~p~d 219 (250)
T 2fwm_X 148 ASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWV-SDDA--EEQRIRGFGEQ-----FKLGIPLGKIARPQE 219 (250)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------------------CHHH
T ss_pred HHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCcccccccc-ChhH--HHHHHhhhhhc-----ccccCCCCCCcCHHH
Confidence 9999999988765 348999999999999875422100 0000 00000000000 000011124678999
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++.++..... .-.++++++.+|
T Consensus 220 vA~~v~~l~s~~~~-~~tG~~i~vdGG 245 (250)
T 2fwm_X 220 IANTILFLASDLAS-HITLQDIVVDGG 245 (250)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCcccc-CCCCCEEEECCC
Confidence 99999988864322 223788998877
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=3e-17 Score=166.29 Aligned_cols=221 Identities=14% Similarity=0.124 Sum_probs=152.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.| .+|+++.|+.... .+.+.+. ++ + ...++.+
T Consensus 45 l~gk~vlVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~--~~~~~~~---------~~-~--------~~~~~~~ 101 (291)
T 3ijr_A 45 LKGKNVLITGGDSGIGRAVSIAFAKEG---ANIAIAYLDEEGD--ANETKQY---------VE-K--------EGVKCVL 101 (291)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCHHH--HHHHHHH---------HH-T--------TTCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCchHH--HHHHHHH---------HH-h--------cCCcEEE
Confidence 679999999999999999999999999 6788888876321 1111110 00 1 1357889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHHc-cC
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC-VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f--------~~~~~~~~~~Nv~gt~~ll~la~~~-~~ 153 (570)
+.+|+++ .+..+.++ ..+|++||+||.... .+.++..+++|+.|+.++++.+... ++
T Consensus 102 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~ 174 (291)
T 3ijr_A 102 LPGDLSD-------EQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ 174 (291)
T ss_dssp EESCTTS-------HHHHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence 9999995 43333443 368999999997531 2456778999999999999998763 34
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
-.++|++||...+... .....|+.
T Consensus 175 ~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 198 (291)
T 3ijr_A 175 GDVIINTASIVAYEGN--------------------------------------------------------ETLIDYSA 198 (291)
T ss_dssp TCEEEEECCTHHHHCC--------------------------------------------------------TTCHHHHH
T ss_pred CCEEEEEechHhcCCC--------------------------------------------------------CCChhHHH
Confidence 4589999997654321 12357999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHH
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..|.+.+.+ ..++++..++|+.|.++.... . . ..........+ .....+..++|+
T Consensus 199 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~---~----~-~~~~~~~~~~~---------~p~~r~~~p~dv 261 (291)
T 3ijr_A 199 TKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPS---S----F-DEKKVSQFGSN---------VPMQRPGQPYEL 261 (291)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHH---H----S-CHHHHHHTTTT---------STTSSCBCGGGT
T ss_pred HHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccc---c----C-CHHHHHHHHcc---------CCCCCCcCHHHH
Confidence 999999988765 348999999999998864210 0 0 01111111111 122346789999
Q ss_pred HHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|++++.++...... -.++++++.+|
T Consensus 262 A~~v~~L~s~~~~~-itG~~i~vdGG 286 (291)
T 3ijr_A 262 APAYVYLASSDSSY-VTGQMIHVNGG 286 (291)
T ss_dssp HHHHHHHHSGGGTT-CCSCEEEESSS
T ss_pred HHHHHHHhCCccCC-CcCCEEEECCC
Confidence 99999888643322 23789999887
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.75 E-value=2.1e-17 Score=163.50 Aligned_cols=216 Identities=13% Similarity=0.113 Sum_probs=149.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||++++++|++.| .+|+++.|+.... +.+.++ . ..++..
T Consensus 7 l~gk~~lVTGas~gIG~a~a~~l~~~G---~~V~~~~r~~~~~---~~~~~~-------------~--------~~~~~~ 59 (248)
T 3op4_A 7 LEGKVALVTGASRGIGKAIAELLAERG---AKVIGTATSESGA---QAISDY-------------L--------GDNGKG 59 (248)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESSHHHH---HHHHHH-------------H--------GGGEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHH-------------h--------cccceE
Confidence 679999999999999999999999999 6788888864321 121111 1 145678
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--c
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~ 152 (570)
+.+|+++ .+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+.. + .
T Consensus 60 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~ 132 (248)
T 3op4_A 60 MALNVTN-------PESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKK 132 (248)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 9999995 443344443 79999999997642 245677899999999999998754 2 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... +....|+
T Consensus 133 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 156 (248)
T 3op4_A 133 RQGRIINVGSVVGTMGN--------------------------------------------------------AGQANYA 156 (248)
T ss_dssp TCEEEEEECCHHHHHCC--------------------------------------------------------TTCHHHH
T ss_pred CCCEEEEEcchhhcCCC--------------------------------------------------------CCChHHH
Confidence 55789999997543211 1235799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.. ..++++..++|+.|.++.....+. ........+. ....+..++|
T Consensus 157 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---------~~~~~~~~~~---------p~~r~~~p~d 218 (248)
T 3op4_A 157 AAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALND---------EQRTATLAQV---------PAGRLGDPRE 218 (248)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCH---------HHHHHHHHTC---------TTCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCH---------HHHHHHHhcC---------CCCCCcCHHH
Confidence 9999888877654 458999999999998765432211 1111111111 1234678999
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++.++..... .-.++++++.+|
T Consensus 219 va~~v~~L~s~~~~-~itG~~i~vdgG 244 (248)
T 3op4_A 219 IASAVAFLASPEAA-YITGETLHVNGG 244 (248)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHcCCccC-CccCcEEEECCC
Confidence 99999988853332 223789999887
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.7e-17 Score=162.73 Aligned_cols=230 Identities=11% Similarity=0.065 Sum_probs=147.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+... .+.+.++ +....+ ..++.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------~~~~~~-------~~~~~~ 62 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNG---ARLLLFSRNREK---LEAAASR---------IASLVS-------GAQVDI 62 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHHHST-------TCCEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHhcCC-------CCeEEE
Confidence 678999999999999999999999998 678888886422 1111111 111100 127889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---cC
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~ 153 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+
T Consensus 63 ~~~D~~~-------~~~v~~~~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~ 135 (260)
T 2z1n_A 63 VAGDIRE-------PGDIDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG 135 (260)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT
T ss_pred EEccCCC-------HHHHHHHHHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 9999994 443444443 49999999996532 2356778999999998877766431 25
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||...+... +....|+.
T Consensus 136 ~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~ 159 (260)
T 2z1n_A 136 WGRMVYIGSVTLLRPW--------------------------------------------------------QDLALSNI 159 (260)
T ss_dssp CEEEEEECCGGGTSCC--------------------------------------------------------TTBHHHHH
T ss_pred CcEEEEECchhhcCCC--------------------------------------------------------CCCchhHH
Confidence 6899999998654321 12357999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCC-ccccCccchHHH-HHHHhcCCceeeecCCCeeeeeeehH
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFP-GWVEDLKTINTL-FVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~-gw~~~~~~~~~~-i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
||+..+.+.+.. ..+++++++||+.|.++...... ............ ...... ......+...+
T Consensus 160 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~~~~ 230 (260)
T 2z1n_A 160 MRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMAS---------RIPMGRVGKPE 230 (260)
T ss_dssp HTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC--------------------------------CCTTSSCCCHH
T ss_pred HHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHh---------cCCCCCccCHH
Confidence 999999888754 34899999999999987542100 000000000000 000000 00112367899
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++..... .-.++++++.+|
T Consensus 231 dva~~v~~l~s~~~~-~~tG~~i~vdGG 257 (260)
T 2z1n_A 231 ELASVVAFLASEKAS-FITGAVIPVDGG 257 (260)
T ss_dssp HHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhCcccc-CCCCCEEEeCCC
Confidence 999999988753322 223788988876
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.74 E-value=3.1e-17 Score=168.62 Aligned_cols=240 Identities=13% Similarity=0.130 Sum_probs=160.4
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC-------CcccHHHHHHHHHhhhhhHHHHHhhhcccccc
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA-------DIDSAALRFQNEVLAKDVFNVLKEKWGTRLNS 81 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~-------~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~ 81 (570)
.++||+|+||||+|+||++++++|++.| .+|+++.|+. ......+.+.+++ ...
T Consensus 24 ~l~gk~vlVTGas~GIG~aia~~la~~G---~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~---------~~~------- 84 (322)
T 3qlj_A 24 VVDGRVVIVTGAGGGIGRAHALAFAAEG---ARVVVNDIGVGLDGSPASGGSAAQSVVDEI---------TAA------- 84 (322)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEECCCBCTTSSBTCTTSHHHHHHHHH---------HHT-------
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCcccccccccccHHHHHHHHHHH---------Hhc-------
Confidence 4789999999999999999999999999 6788888761 1122223322221 111
Q ss_pred ccCCceEEEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHH
Q 008324 82 FISEKITFVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNF 147 (570)
Q Consensus 82 ~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~l 147 (570)
..++.++.+|+++ .+..+.+++ .+|+|||+||.... .+.++..+++|+.|+.+++++
T Consensus 85 --~~~~~~~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~ 155 (322)
T 3qlj_A 85 --GGEAVADGSNVAD-------WDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRH 155 (322)
T ss_dssp --TCEEEEECCCTTS-------HHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCcEEEEECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHH
Confidence 2578899999994 443444443 79999999997642 245677899999999999998
Q ss_pred HHHc-cC--------ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhcc
Q 008324 148 AKKC-VK--------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLG 218 (570)
Q Consensus 148 a~~~-~~--------l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 218 (570)
+... .. -.++|++||.......
T Consensus 156 ~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~------------------------------------------------- 186 (322)
T 3qlj_A 156 AAAYWRGLSKAGKAVDGRIINTSSGAGLQGS------------------------------------------------- 186 (322)
T ss_dssp HHHHHHHHHHTTCCCCEEEEEECCHHHHHCB-------------------------------------------------
T ss_pred HHHHHHHccccCCCCCcEEEEEcCHHHccCC-------------------------------------------------
Confidence 7642 11 1489999997544221
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeee
Q 008324 219 TERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLV 293 (570)
Q Consensus 219 ~~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~ 293 (570)
.....|+.||+..+.+++.+ ..++++..++|+ +..+..+. +.... .
T Consensus 187 -------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~---~~~~~------------------~ 237 (322)
T 3qlj_A 187 -------VGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTET---VFAEM------------------M 237 (322)
T ss_dssp -------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCC---SCCC--------------------
T ss_pred -------CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchh---hhhhh------------------h
Confidence 12357999999999988765 358999999999 55433221 11110 0
Q ss_pred cCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCCCCC---------------cccHHHHHHHHhhhcccC
Q 008324 294 GETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRN---------------PVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 294 ~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~~~~---------------pit~~~l~~~i~~~~~~~ 355 (570)
..+....+++.++|+|++++.++...... -.++++++.+|... ..+..++++.+.+.++..
T Consensus 238 ~~~~~~~~~~~pedva~~v~~L~s~~~~~-itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~ 313 (322)
T 3qlj_A 238 ATQDQDFDAMAPENVSPLVVWLGSAEARD-VTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKA 313 (322)
T ss_dssp ------CCTTCGGGTHHHHHHHTSGGGGG-CCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHS
T ss_pred hccccccCCCCHHHHHHHHHHHhCccccC-CCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhcc
Confidence 01112234567899999999887543321 23788988877211 236689999998888753
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.74 E-value=4.3e-17 Score=163.29 Aligned_cols=220 Identities=15% Similarity=0.119 Sum_probs=148.7
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.| .+|+++.|+.... .+.+.++ +++ ...++.+
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G---~~V~~~~r~~~~~--~~~~~~~---------~~~---------~~~~~~~ 83 (271)
T 4iin_A 27 FTGKNVLITGASKGIGAEIAKTLASMG---LKVWINYRSNAEV--ADALKNE---------LEE---------KGYKAAV 83 (271)
T ss_dssp CSCCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHH--HHHHHHH---------HHH---------TTCCEEE
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCCHHH--HHHHHHH---------HHh---------cCCceEE
Confidence 578999999999999999999999998 6788888854321 1222211 111 1257889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 84 ~~~D~~~-------~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 156 (271)
T 4iin_A 84 IKFDAAS-------ESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKS 156 (271)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EECCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc
Confidence 9999995 33333443 379999999998642 2456778999999999998877542 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 157 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 180 (271)
T 4iin_A 157 RFGSVVNVASIIGERGN--------------------------------------------------------MGQTNYS 180 (271)
T ss_dssp TCEEEEEECCHHHHHCC--------------------------------------------------------TTCHHHH
T ss_pred CCCEEEEEechhhcCCC--------------------------------------------------------CCchHhH
Confidence 55789999997543211 1235799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+++.+ ..++++..++|+.|.++.....+.. .... .........+.+.+|
T Consensus 181 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~---------~~~~---------~~~~~~~~~~~~p~d 242 (271)
T 4iin_A 181 ASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDE---------LKAD---------YVKNIPLNRLGSAKE 242 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------------------------------CGGGCTTCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHH---------HHHH---------HHhcCCcCCCcCHHH
Confidence 9999999988765 3579999999999987654322110 0000 011112234678999
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++.++..... .-.|+++++.+|
T Consensus 243 vA~~i~~l~s~~~~-~itG~~i~vdGG 268 (271)
T 4iin_A 243 VAEAVAFLLSDHSS-YITGETLKVNGG 268 (271)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCCCcC-CCcCCEEEeCCC
Confidence 99999988864332 223789999887
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=4.7e-17 Score=161.96 Aligned_cols=230 Identities=16% Similarity=0.164 Sum_probs=147.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.| .+|+++.|+.... .+.+.++ +.+.. ..++.+
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~--~~~~~~~---------~~~~~--------~~~~~~ 59 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQG---ADIVLNGFGDAAE--IEKVRAG---------LAAQH--------GVKVLY 59 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEECCSCHHH--HHHHHHH---------HHHHH--------TSCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcC---CEEEEEeCCcchH--HHHHHHH---------HHhcc--------CCcEEE
Confidence 578999999999999999999999998 6788888865320 1222111 11111 146888
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 60 ~~~D~~~-------~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 132 (260)
T 1x1t_A 60 DGADLSK-------GEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ 132 (260)
T ss_dssp ECCCTTS-------HHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EECCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999994 443334443 79999999997542 2446778999999999999888542 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+... .....|+
T Consensus 133 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 156 (260)
T 1x1t_A 133 GFGRIINIASAHGLVAS--------------------------------------------------------ANKSAYV 156 (260)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHHH
T ss_pred CCCEEEEECcHHhCcCC--------------------------------------------------------CCCchHH
Confidence 56799999997543211 1235799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCC-CccccCccch--HHHHHHHhcCCceeeecCCCeeeeeee
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPF-PGWVEDLKTI--NTLFVASAQGNLRCLVGETKVIMDVIP 304 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~-~gw~~~~~~~--~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.||+..|.+.+.+ ..++++++++|+.|.++..... +.+... .+. ...... +.........+..
T Consensus 157 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~--------~~~~~~p~~~~~~ 227 (260)
T 1x1t_A 157 AAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEK-NGVDQETAARE--------LLSEKQPSLQFVT 227 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---------------------------------CHHHHCTTCCCBC
T ss_pred HHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccc-cCCchHHHHHH--------HhhccCCCCCCcC
Confidence 9999999988754 3479999999999988654221 100000 000 000000 0000001134688
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++|+|++++.++..... .-.++++++.+|
T Consensus 228 p~dva~~~~~l~s~~~~-~~tG~~~~vdgG 256 (260)
T 1x1t_A 228 PEQLGGTAVFLASDAAA-QITGTTVSVDGG 256 (260)
T ss_dssp HHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHHhChhhc-CCCCCEEEECCC
Confidence 99999999988853322 223789999876
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.5e-17 Score=165.50 Aligned_cols=219 Identities=12% Similarity=0.070 Sum_probs=147.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.| .+|+++.|+..... .+.+++ . .. ..++.+
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~G---~~V~~~~r~~~~~~---~~~~~~---------~-~~--------~~~~~~ 87 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQAG---ADVAIWYNSHPADE---KAEHLQ---------K-TY--------GVHSKA 87 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHHT---CEEEEEESSSCCHH---HHHHHH---------H-HH--------CSCEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHH---HHHHHH---------H-hc--------CCcceE
Confidence 679999999999999999999999998 67889999765422 111111 1 00 256889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc------c---ccHHHHHHHhHHH----HHHHHHHHH
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF------D---ERYDVAFGINTLG----VIHLVNFAK 149 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f------~---~~~~~~~~~Nv~g----t~~ll~la~ 149 (570)
+.+|+++ .+..+.+++ .+|+|||+||.... + +.++..+++|+.| ++.+++.++
T Consensus 88 ~~~Dl~~-------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 160 (279)
T 3ctm_A 88 YKCNISD-------PKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFK 160 (279)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEeecCC-------HHHHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 9999995 333334443 49999999997543 2 2356678999999 556666666
Q ss_pred HccCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc
Q 008324 150 KCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (570)
Q Consensus 150 ~~~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
+. +..++|++||...+.... . ....
T Consensus 161 ~~-~~~~iv~isS~~~~~~~~-------~-----------------------------------------------~~~~ 185 (279)
T 3ctm_A 161 KN-GKGSLIITSSISGKIVNI-------P-----------------------------------------------QLQA 185 (279)
T ss_dssp HH-TCCEEEEECCCTTSCC---------------------------------------------------------CCHH
T ss_pred hc-CCCeEEEECchHhccCCC-------C-----------------------------------------------CCcc
Confidence 54 678999999975432100 0 1235
Q ss_pred hHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeee
Q 008324 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (570)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.|+.||+..|.+++.+ ..+ ++.+++|+.|.++..... . ........... ....+++
T Consensus 186 ~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~----~-----~~~~~~~~~~~---------p~~~~~~ 246 (279)
T 3ctm_A 186 PYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA----S-----KDMKAKWWQLT---------PLGREGL 246 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC----C-----HHHHHHHHHHS---------TTCSCBC
T ss_pred cHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc----C-----hHHHHHHHHhC---------CccCCcC
Confidence 7999999999998765 235 999999999987653211 0 11111111100 0123688
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++|+|++++.++.... ....++++++.+|
T Consensus 247 ~~dvA~~~~~l~s~~~-~~~tG~~i~vdgG 275 (279)
T 3ctm_A 247 TQELVGGYLYLASNAS-TFTTGSDVVIDGG 275 (279)
T ss_dssp GGGTHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHHHHhCccc-cCccCCEEEECCC
Confidence 9999999998886332 2223789999887
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=2.3e-16 Score=158.27 Aligned_cols=225 Identities=16% Similarity=0.141 Sum_probs=147.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||||+||++++++|++.| .+|+++.|+... .+.+. +.+++. ..++.+
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~---~~~~~---------~~~~~~---------~~~~~~ 74 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLG---ARVYTCSRNEKE---LDECL---------EIWREK---------GLNVEG 74 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH---------HHHHHT---------TCCEEE
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH---------HHHHhc---------CCceEE
Confidence 678999999999999999999999998 678888886422 11111 111111 256889
Q ss_pred EeccCCCCCCCCCchhhHHHHh--------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--
Q 008324 90 VPGDISSEDLGLKDSNLKEELW--------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C-- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~--------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~-- 151 (570)
+.+|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++++++.. +
T Consensus 75 ~~~D~~~-------~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~ 147 (273)
T 1ae1_A 75 SVCDLLS-------RTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKA 147 (273)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 9999995 33333443 579999999997532 245677889999999999998853 1
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||...+... +....|
T Consensus 148 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 171 (273)
T 1ae1_A 148 SQNGNVIFLSSIAGFSAL--------------------------------------------------------PSVSLY 171 (273)
T ss_dssp HTSEEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred cCCcEEEEEcCHhhcCCC--------------------------------------------------------CCcchh
Confidence 256799999998654321 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..|.+.+.. ..++++++++|+.|.++..+... ................. + ...+...+
T Consensus 172 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~----p-----~~r~~~p~ 239 (273)
T 1ae1_A 172 SASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAI---KKNPHQKEEIDNFIVKT----P-----MGRAGKPQ 239 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------------CHHHHHHHHHHS----T-----TCSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhh---hcccCcHHHHHHHHhcC----C-----CCCCcCHH
Confidence 99999999988765 34899999999999987542110 00000001111111100 0 12367899
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++..... .-.++++++.+|
T Consensus 240 dvA~~v~~l~s~~~~-~~tG~~i~vdGG 266 (273)
T 1ae1_A 240 EVSALIAFLCFPAAS-YITGQIIWADGG 266 (273)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhCcccc-CcCCCEEEECCC
Confidence 999999988753322 223789999877
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=6.5e-17 Score=159.93 Aligned_cols=219 Identities=15% Similarity=0.124 Sum_probs=144.6
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.++||+|+||||||+||++++++|++.| .+|+++.|+.... ..+.+. +. ..++.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~-~~~~~~--------------~~--------~~~~~ 57 (249)
T 2ew8_A 4 RLKDKLAVITGGANGIGRAIAERFAVEG---ADIAIADLVPAPE-AEAAIR--------------NL--------GRRVL 57 (249)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCHH-HHHHHH--------------HT--------TCCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEcCCchhH-HHHHHH--------------hc--------CCcEE
Confidence 3679999999999999999999999998 6788998876211 111111 00 25788
Q ss_pred EEeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--
Q 008324 89 FVPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C-- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~-- 151 (570)
++.+|+++ .+..+.+ ..++|+|||+||.... .+.++..+++|+.|+.++++++.. +
T Consensus 58 ~~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 130 (249)
T 2ew8_A 58 TVKCDVSQ-------PGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKR 130 (249)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEEeecCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 99999995 3333343 3479999999997532 234677899999999888887543 1
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||...+... +....|
T Consensus 131 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 154 (249)
T 2ew8_A 131 NGWGRIINLTSTTYWLKI--------------------------------------------------------EAYTHY 154 (249)
T ss_dssp HTCEEEEEECCGGGGSCC--------------------------------------------------------SSCHHH
T ss_pred cCCeEEEEEcchhhccCC--------------------------------------------------------CCchhH
Confidence 256799999998654321 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCC-CCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKE-PFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~e-p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
+.||+..|.+.+.. ..++++++++|+.|.++... ..+ ... ... ..... .....+...
T Consensus 155 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~---~~~----~~~~~-------~~~~~~~~p 217 (249)
T 2ew8_A 155 ISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASAL---SAM---FDV----LPNML-------QAIPRLQVP 217 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----------------------------CTT-------SSSCSCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccc---cch---hhH----HHHhh-------CccCCCCCH
Confidence 99999999988765 34899999999999886532 110 000 000 00000 011246789
Q ss_pred HHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|+|++++.++..... .-.++++++.+|
T Consensus 218 ~dva~~~~~l~s~~~~-~~tG~~~~vdGG 245 (249)
T 2ew8_A 218 LDLTGAAAFLASDDAS-FITGQTLAVDGG 245 (249)
T ss_dssp HHHHHHHHHHTSGGGT-TCCSCEEEESSS
T ss_pred HHHHHHHHHHcCcccC-CCCCcEEEECCC
Confidence 9999999988753322 223788998876
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=2.6e-17 Score=162.47 Aligned_cols=221 Identities=11% Similarity=0.086 Sum_probs=148.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+.. +++ ++ . + ..++.+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~------~~~-~~---------~-~---------~~~~~~ 54 (246)
T 2ag5_A 4 LDGKVIILTAAAQGIGQAAALAFAREG---AKVIATDINES------KLQ-EL---------E-K---------YPGIQT 54 (246)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHH------HHG-GG---------G-G---------STTEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHH------HHH-HH---------H-h---------ccCceE
Confidence 579999999999999999999999998 67888888642 111 00 0 0 136888
Q ss_pred EeccCCCCCCCCCchhhHHHH---hCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---cCceE
Q 008324 90 VPGDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKV 156 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l---~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~l~~ 156 (570)
+.+|+++ .+..+.+ ..++|+|||+||.... .+.++..+++|+.|+.++++.+... .+..+
T Consensus 55 ~~~D~~~-------~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~ 127 (246)
T 2ag5_A 55 RVLDVTK-------KKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGN 127 (246)
T ss_dssp EECCTTC-------HHHHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred EEeeCCC-------HHHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCce
Confidence 9999995 3333333 3579999999997643 2446778899999999999987642 25679
Q ss_pred EEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHH
Q 008324 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (570)
Q Consensus 157 ~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+|++||........ .....|+.||+
T Consensus 128 iv~isS~~~~~~~~-------------------------------------------------------~~~~~Y~~sK~ 152 (246)
T 2ag5_A 128 IINMSSVASSVKGV-------------------------------------------------------VNRCVYSTTKA 152 (246)
T ss_dssp EEEECCSBTTTBCC-------------------------------------------------------TTBHHHHHHHH
T ss_pred EEEEechHhCcCCC-------------------------------------------------------CCCccHHHHHH
Confidence 99999975432110 02357999999
Q ss_pred HHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHH
Q 008324 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (570)
Q Consensus 237 ~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~a 311 (570)
..|.+++.. ..+++++++||+.|+++.... +.................. + ...++..+|+|++
T Consensus 153 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~~~~~~~-------~--~~~~~~~~dvA~~ 220 (246)
T 2ag5_A 153 AVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQE---RIQARGNPEEARNDFLKRQ-------K--TGRFATAEEIAML 220 (246)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHH---HHHHSSSHHHHHHHHHHTC-------T--TSSCEEHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhh---hhhcccCcHHHHHHHHhcC-------C--CCCCCCHHHHHHH
Confidence 999998765 348999999999999864211 0000000111111111110 0 1236789999999
Q ss_pred HHHHHHHhhCCCCCCceEEecCC
Q 008324 312 MIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++.++..... .-.++++++.+|
T Consensus 221 v~~l~s~~~~-~~tG~~i~vdgG 242 (246)
T 2ag5_A 221 CVYLASDESA-YVTGNPVIIDGG 242 (246)
T ss_dssp HHHHHSGGGT-TCCSCEEEECTT
T ss_pred HHHHhCcccc-CCCCCEEEECCC
Confidence 9988853322 223788988876
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=2.6e-17 Score=164.37 Aligned_cols=232 Identities=16% Similarity=0.140 Sum_probs=154.9
Q ss_pred HHhhcCCCEEEEECCc--chhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccc
Q 008324 6 VVEFLENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFI 83 (570)
Q Consensus 6 i~~~~~~k~VlITGaT--GFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~ 83 (570)
....+++|+|+||||+ |+||++++++|++.| .+|+++.|+.+.....+.+. ++
T Consensus 8 ~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~-------------~~--------- 62 (271)
T 3ek2_A 8 HMGFLDGKRILLTGLLSNRSIAYGIAKACKREG---AELAFTYVGDRFKDRITEFA-------------AE--------- 62 (271)
T ss_dssp -CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTT---CEEEEEESSGGGHHHHHHHH-------------HH---------
T ss_pred CccccCCCEEEEeCCCCCCcHHHHHHHHHHHcC---CCEEEEecchhhHHHHHHHH-------------HH---------
Confidence 4567889999999999 999999999999998 67889999754332222221 11
Q ss_pred CCceEEEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc------------cccHHHHHHHhHHHHHHH
Q 008324 84 SEKITFVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF------------DERYDVAFGINTLGVIHL 144 (570)
Q Consensus 84 ~~kv~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f------------~~~~~~~~~~Nv~gt~~l 144 (570)
..++.++.+|+++ .+..+.+++ .+|+|||+||.... .+.++..+++|+.|+.++
T Consensus 63 ~~~~~~~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l 135 (271)
T 3ek2_A 63 FGSELVFPCDVAD-------DAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPAL 135 (271)
T ss_dssp TTCCCEEECCTTC-------HHHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHH
T ss_pred cCCcEEEECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHH
Confidence 1457789999995 443444443 68999999997532 234677899999999999
Q ss_pred HHHHHHc-cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccc
Q 008324 145 VNFAKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAK 223 (570)
Q Consensus 145 l~la~~~-~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 223 (570)
++.+... .+-.++|++||.......
T Consensus 136 ~~~~~~~~~~~g~iv~isS~~~~~~~------------------------------------------------------ 161 (271)
T 3ek2_A 136 AKAALPMLSDDASLLTLSYLGAERAI------------------------------------------------------ 161 (271)
T ss_dssp HHHHGGGEEEEEEEEEEECGGGTSBC------------------------------------------------------
T ss_pred HHHHHHHhccCceEEEEeccccccCC------------------------------------------------------
Confidence 9998763 233589999987543211
Q ss_pred cCCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCe
Q 008324 224 LHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKV 298 (570)
Q Consensus 224 ~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~ 298 (570)
+....|+.||+..+.+.+.+ ..++++.+++|+.|.++..... ............+. .
T Consensus 162 --~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~~---------~ 223 (271)
T 3ek2_A 162 --PNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGI-------KSFGKILDFVESNS---------P 223 (271)
T ss_dssp --TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCC-------HHHHHHHHHHHHHS---------T
T ss_pred --CCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcc-------cchHHHHHHHHhcC---------C
Confidence 12357999999999988765 3489999999999988654321 11111222221111 1
Q ss_pred eeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCCCCCcccHHHH
Q 008324 299 IMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSI 344 (570)
Q Consensus 299 ~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~~~~pit~~~l 344 (570)
...+...+++|++++.++..... .-.++++++.+| ..++..++
T Consensus 224 ~~~~~~pedva~~i~~l~s~~~~-~~tG~~i~vdgG--~~~~~~~~ 266 (271)
T 3ek2_A 224 LKRNVTIEQVGNAGAFLLSDLAS-GVTAEVMHVDSG--FNAVVGGM 266 (271)
T ss_dssp TSSCCCHHHHHHHHHHHHSGGGT-TCCSEEEEESTT--GGGBCCCC
T ss_pred cCCCCCHHHHHHHHHHHcCcccC-CeeeeEEEECCC--eeeehhhh
Confidence 12346789999999988864322 224889999988 55554443
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.74 E-value=6.4e-17 Score=161.54 Aligned_cols=215 Identities=13% Similarity=0.116 Sum_probs=146.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+... ..++.+
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~--------------------------------~~~~~~ 50 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAIAERFVDEG---SKVIDLSIHDPG--------------------------------EAKYDH 50 (264)
T ss_dssp GTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESSCCC--------------------------------SCSSEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEecCccc--------------------------------CCceEE
Confidence 579999999999999999999999998 678888886532 146778
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 51 ~~~Dl~~-------~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 123 (264)
T 2dtx_A 51 IECDVTN-------PDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRS 123 (264)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 9999995 333334443 69999999997543 2356778999999999999988652 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+... .....|+
T Consensus 124 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 147 (264)
T 2dtx_A 124 RDPSIVNISSVQASIIT--------------------------------------------------------KNASAYV 147 (264)
T ss_dssp SSCEEEEECCGGGTSCC--------------------------------------------------------TTBHHHH
T ss_pred CCcEEEEECCchhccCC--------------------------------------------------------CCchhHH
Confidence 45799999997654321 1235799
Q ss_pred HHHHHHHHHHHHh----ccCCcEEEEecCceecCCCCCCCccccCccchH----HHHHHHhcCCceeeecCCCeeeeeee
Q 008324 233 FTKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTIN----TLFVASAQGNLRCLVGETKVIMDVIP 304 (570)
Q Consensus 233 ~sK~~aE~lv~~~----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~----~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.||+..|.+.+.+ ...+++++++|+.|.++.......... .... ........+. ....++.
T Consensus 148 ~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---------p~~~~~~ 216 (264)
T 2dtx_A 148 TSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEV--GSDPMRIEKKISEWGHEH---------PMQRIGK 216 (264)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHH--CSCHHHHHHHHHHHHHHS---------TTSSCBC
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhccc--ccCchhhHHHHHHHHhcC---------CCCCCcC
Confidence 9999999988765 223899999999987643210000000 0000 1111111110 1124689
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++|+|++++.++..... .-.++++++.++
T Consensus 217 p~dvA~~v~~l~s~~~~-~~tG~~i~vdGG 245 (264)
T 2dtx_A 217 PQEVASAVAFLASREAS-FITGTCLYVDGG 245 (264)
T ss_dssp HHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHHhCchhc-CCCCcEEEECCC
Confidence 99999999988853322 223788998876
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.74 E-value=2.7e-17 Score=164.55 Aligned_cols=216 Identities=14% Similarity=0.124 Sum_probs=145.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.| .+|++..|+... .+.+. ++. ..++.+
T Consensus 25 l~gk~vlVTGas~gIG~aia~~la~~G---~~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~ 77 (266)
T 3grp_A 25 LTGRKALVTGATGGIGEAIARCFHAQG---AIVGLHGTREDK---LKEIA-------------ADL--------GKDVFV 77 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HHH--------CSSEEE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------HHh--------CCceEE
Confidence 679999999999999999999999999 678888885422 11111 111 357889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++.+.+... .
T Consensus 78 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 150 (266)
T 3grp_A 78 FSANLSD-------RKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRR 150 (266)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeecCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999995 443344443 79999999997642 2457778999999987777766431 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 151 ~~g~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 174 (266)
T 3grp_A 151 RYGRIINITSIVGVVGN--------------------------------------------------------PGQTNYC 174 (266)
T ss_dssp TCEEEEEECCC---------------------------------------------------------------CHHHHH
T ss_pred CCcEEEEECCHHHcCCC--------------------------------------------------------CCchhHH
Confidence 55799999997543211 1135799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.. ..++++.+++|+.|.++.....+ .........+. ....+..++|
T Consensus 175 asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~---------~~~~~~~~~~~---------p~~r~~~~ed 236 (266)
T 3grp_A 175 AAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLN---------EKQKEAIMAMI---------PMKRMGIGEE 236 (266)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCC---------HHHHHHHHTTC---------TTCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccC---------HHHHHHHHhcC---------CCCCCcCHHH
Confidence 9999888877654 35899999999999875432111 11112222221 1234567899
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++.++.+... .-.++++++.+|
T Consensus 237 vA~~v~~L~s~~~~-~itG~~i~vdGG 262 (266)
T 3grp_A 237 IAFATVYLASDEAA-YLTGQTLHINGG 262 (266)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCcccc-CccCCEEEECCC
Confidence 99999988864332 223789999887
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=5.2e-17 Score=165.16 Aligned_cols=228 Identities=11% Similarity=0.139 Sum_probs=149.6
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
..++||+|+||||||+||++++++|++.| .+|+++.|+... .+.+. +.++...+. ....++
T Consensus 14 ~~l~~k~vlVTGasggIG~~la~~l~~~G---~~V~~~~r~~~~---~~~~~---------~~l~~~~~~----~~~~~~ 74 (303)
T 1yxm_A 14 GLLQGQVAIVTGGATGIGKAIVKELLELG---SNVVIASRKLER---LKSAA---------DELQANLPP----TKQARV 74 (303)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH---------HHHHHTSCT----TCCCCE
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH---------HHHHhhccc----cCCccE
Confidence 35789999999999999999999999998 678888886422 11111 112211110 013578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc--
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-- 151 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~-- 151 (570)
.++.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 75 ~~~~~D~~~-------~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 147 (303)
T 1yxm_A 75 IPIQCNIRN-------EEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWM 147 (303)
T ss_dssp EEEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTH
T ss_pred EEEecCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 999999994 333344443 59999999996432 2346677999999999999998762
Q ss_pred -cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+..++|++||.. .... +....
T Consensus 148 ~~~~~~iv~isS~~-~~~~--------------------------------------------------------~~~~~ 170 (303)
T 1yxm_A 148 KEHGGSIVNIIVPT-KAGF--------------------------------------------------------PLAVH 170 (303)
T ss_dssp HHHCEEEEEECCCC-TTCC--------------------------------------------------------TTCHH
T ss_pred HhcCCeEEEEEeec-ccCC--------------------------------------------------------Ccchh
Confidence 2357899999876 2110 11346
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCC-CCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeee
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYK-EPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~-ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
|+.||+..+.+.+.. ..+++++++||+.|+|+.. .....+... .+ .......+ ...++.
T Consensus 171 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~------~~----~~~~~~~p-----~~~~~~ 235 (303)
T 1yxm_A 171 SGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQS------FF----EGSFQKIP-----AKRIGV 235 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGG------GG----TTGGGGST-----TSSCBC
T ss_pred hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchH------HH----HHHHhcCc-----ccCCCC
Confidence 888998888877654 3489999999999999732 111111110 00 00000011 123678
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++|+|++++.++.... ....++++++.+|
T Consensus 236 ~~dvA~~i~~l~~~~~-~~~~G~~~~v~gG 264 (303)
T 1yxm_A 236 PEEVSSVVCFLLSPAA-SFITGQSVDVDGG 264 (303)
T ss_dssp THHHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHHHHhCccc-ccCCCcEEEECCC
Confidence 9999999998885332 2223789999887
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.74 E-value=8.8e-17 Score=158.65 Aligned_cols=220 Identities=16% Similarity=0.189 Sum_probs=147.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|.... ..+.+.++ ++.. ..++.+
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G---~~V~~~~r~~~~--~~~~~~~~---------~~~~---------~~~~~~ 58 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQG---ANVVVNYAGNEQ--KANEVVDE---------IKKL---------GSDAIA 58 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHH---------HHHT---------TCCEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCCHH--HHHHHHHH---------HHhc---------CCcEEE
Confidence 468999999999999999999999998 678888883211 11111111 1111 256889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--c
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~ 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++.+.+.. + .
T Consensus 59 ~~~D~~~-------~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 131 (246)
T 2uvd_A 59 VRADVAN-------AEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQ 131 (246)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 9999995 333344443 79999999997542 234677899999998887776643 1 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... +....|+
T Consensus 132 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 155 (246)
T 2uvd_A 132 RHGRIVNIASVVGVTGN--------------------------------------------------------PGQANYV 155 (246)
T ss_dssp TCEEEEEECCTHHHHCC--------------------------------------------------------TTBHHHH
T ss_pred CCcEEEEECCHHhcCCC--------------------------------------------------------CCCchHH
Confidence 56899999997543211 1135799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.. ..++++++++|+.|.++.....+ +. ......... + ...+++.+|
T Consensus 156 asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~------~~~~~~~~~----p-----~~~~~~~~d 217 (246)
T 2uvd_A 156 AAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLD---EN------IKAEMLKLI----P-----AAQFGEAQD 217 (246)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCC---TT------HHHHHHHTC----T-----TCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcC---HH------HHHHHHhcC----C-----CCCCcCHHH
Confidence 9999888887654 35899999999999876543211 10 011111111 0 123689999
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++.++..... .-.++++++.+|
T Consensus 218 vA~~~~~l~s~~~~-~~tG~~~~vdgG 243 (246)
T 2uvd_A 218 IANAVTFFASDQSK-YITGQTLNVDGG 243 (246)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHcCchhc-CCCCCEEEECcC
Confidence 99999988853322 223788998876
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.74 E-value=9.3e-17 Score=161.49 Aligned_cols=220 Identities=13% Similarity=0.109 Sum_probs=151.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.| .+|+++.|+.... +.+.+++ .. ...++.+
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~---~~~~~~~---------~~---------~~~~~~~ 85 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAG---AQVAVAARHSDAL---QVVADEI---------AG---------VGGKALP 85 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESSGGGG---HHHHHHH---------HH---------TTCCCEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hh---------cCCeEEE
Confidence 679999999999999999999999999 6789999975432 2222111 11 1257889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc-c--
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-V-- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~-~-- 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 86 ~~~Dl~d-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~ 158 (276)
T 3r1i_A 86 IRCDVTQ-------PDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQ 158 (276)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999995 443444444 79999999998643 2446777899999999999987652 1
Q ss_pred C-ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 153 K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 153 ~-l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+ -.++|++||........ + .....|
T Consensus 159 ~~~g~iv~isS~~~~~~~~-----------~-------------------------------------------~~~~~Y 184 (276)
T 3r1i_A 159 GLGGTIITTASMSGHIINI-----------P-------------------------------------------QQVSHY 184 (276)
T ss_dssp TSCEEEEEECCGGGTSCCC-----------S-------------------------------------------SCCHHH
T ss_pred CCCcEEEEECchHhcccCC-----------C-------------------------------------------CCcchH
Confidence 2 26799999875432110 0 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.. ..++++..++|+.|.++..++.+.+ ......+. ....+...+
T Consensus 185 ~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~----------~~~~~~~~---------p~~r~~~pe 245 (276)
T 3r1i_A 185 CTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADY----------HALWEPKI---------PLGRMGRPE 245 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGG----------HHHHGGGS---------TTSSCBCGG
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHH----------HHHHHhcC---------CCCCCcCHH
Confidence 99999999988765 3589999999999988765432211 11111111 112356789
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++..... .-.++++++.+|
T Consensus 246 dvA~~v~fL~s~~~~-~itG~~i~vdGG 272 (276)
T 3r1i_A 246 ELTGLYLYLASAASS-YMTGSDIVIDGG 272 (276)
T ss_dssp GSHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHcCcccc-CccCcEEEECcC
Confidence 999999988864332 223789999887
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.74 E-value=3.5e-17 Score=164.08 Aligned_cols=221 Identities=12% Similarity=0.123 Sum_probs=151.0
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.-++||+|+||||+|+||++++++|++.| .+|+++.|+.... +.+.++ +++. ..++
T Consensus 24 ~~l~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~---~~~~~~---------~~~~---------~~~~ 79 (270)
T 3ftp_A 24 KTLDKQVAIVTGASRGIGRAIALELARRG---AMVIGTATTEAGA---EGIGAA---------FKQA---------GLEG 79 (270)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSHHHH---HHHHHH---------HHHH---------TCCC
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHH---------HHhc---------CCcE
Confidence 34789999999999999999999999999 6788888864321 221111 1111 2567
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c-
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C- 151 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~- 151 (570)
..+.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+.++++++.. +
T Consensus 80 ~~~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 152 (270)
T 3ftp_A 80 RGAVLNVND-------ATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMM 152 (270)
T ss_dssp EEEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 889999995 433344443 79999999997542 245677899999999999998863 2
Q ss_pred -cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+-.++|++||....... +....
T Consensus 153 ~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 176 (270)
T 3ftp_A 153 KARGGRIVNITSVVGSAGN--------------------------------------------------------PGQVN 176 (270)
T ss_dssp HHTCEEEEEECCHHHHHCC--------------------------------------------------------TTBHH
T ss_pred HcCCCEEEEECchhhCCCC--------------------------------------------------------CCchh
Confidence 245689999997543211 12357
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..+.+.+.. ..++++.+++|+.|.++.....+ ........... ....+..+
T Consensus 177 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---------~~~~~~~~~~~---------p~~r~~~p 238 (270)
T 3ftp_A 177 YAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLP---------QEQQTALKTQI---------PLGRLGSP 238 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSC---------HHHHHHHHTTC---------TTCSCBCH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcC---------HHHHHHHHhcC---------CCCCCCCH
Confidence 999999888877654 35799999999999775332111 11111111111 12346789
Q ss_pred HHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|+|++++.++..... .-.++++++.+|
T Consensus 239 edvA~~v~~L~s~~~~-~itG~~i~vdGG 266 (270)
T 3ftp_A 239 EDIAHAVAFLASPQAG-YITGTTLHVNGG 266 (270)
T ss_dssp HHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHhCCCcC-CccCcEEEECCC
Confidence 9999999988753332 223789999887
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=6.8e-17 Score=161.85 Aligned_cols=218 Identities=13% Similarity=0.124 Sum_probs=149.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.| .+|+++.|..... .+.+.++ ++. ...++.+
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G---~~V~~~~~~~~~~--~~~~~~~---------~~~---------~~~~~~~ 82 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAG---AKVAVNYASSAGA--ADEVVAA---------IAA---------AGGEAFA 82 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHH--HHHHHHH---------HHH---------TTCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCChHH--HHHHHHH---------HHh---------cCCcEEE
Confidence 679999999999999999999999999 6778888754221 1222111 111 1357889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|+++ .+..+.+++ .+|+|||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 83 ~~~D~~d-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 155 (269)
T 4dmm_A 83 VKADVSQ-------ESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQ 155 (269)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 9999995 443344443 79999999998642 2456778999999999999987542 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 156 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 179 (269)
T 4dmm_A 156 RSGRIINIASVVGEMGN--------------------------------------------------------PGQANYS 179 (269)
T ss_dssp TCCEEEEECCHHHHHCC--------------------------------------------------------TTCHHHH
T ss_pred CCcEEEEECchhhcCCC--------------------------------------------------------CCchhHH
Confidence 45689999997543221 1235799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.. ..++++.+++|+.|.++..... .. ....... ....+..++|
T Consensus 180 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~----------~~--~~~~~~~---------p~~r~~~~~d 238 (269)
T 4dmm_A 180 AAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSEL----------AA--EKLLEVI---------PLGRYGEAAE 238 (269)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHH----------HH--HHHGGGC---------TTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccc----------cH--HHHHhcC---------CCCCCCCHHH
Confidence 9999888877654 3589999999999988644210 00 1111111 1124567899
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++.++.+....--.++++++.+|
T Consensus 239 vA~~v~~l~s~~~~~~itG~~i~vdGG 265 (269)
T 4dmm_A 239 VAGVVRFLAADPAAAYITGQVINIDGG 265 (269)
T ss_dssp HHHHHHHHHHCGGGGGCCSCEEEESTT
T ss_pred HHHHHHHHhCCcccCCCcCCEEEECCC
Confidence 999999988742222223789999887
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.74 E-value=8.9e-17 Score=165.39 Aligned_cols=171 Identities=16% Similarity=0.222 Sum_probs=121.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCccc--HHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS--AALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~--~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
+++|+|+||||||+||++++++|++.| .+|++.+|+..+.. ..+.+.+. ++. . ..++
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~G---~~V~~~~r~~~~r~~~~~~~l~~~---------~~~-~--------~~~~ 61 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGAG---HRVYASMRDIVGRNASNVEAIAGF---------ARD-N--------DVDL 61 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESCTTTTTHHHHHHHHHH---------HHH-H--------TCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEecCcccccCHHHHHHHHHH---------HHh-c--------CCcE
Confidence 358999999999999999999999999 68899999743322 22222211 111 1 2578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc--
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-- 151 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~-- 151 (570)
.++.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 62 ~~~~~Dvtd-------~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~ 134 (324)
T 3u9l_A 62 RTLELDVQS-------QVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMR 134 (324)
T ss_dssp EEEECCTTC-------HHHHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEEEeecCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 999999994 443444444 79999999997532 2446777899999999999998421
Q ss_pred -cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+..++|++||........ +....
T Consensus 135 ~~~~g~iV~isS~~~~~~~~-------------------------------------------------------~~~~~ 159 (324)
T 3u9l_A 135 RQKHGLLIWISSSSSAGGTP-------------------------------------------------------PYLAP 159 (324)
T ss_dssp HHTCEEEEEECCGGGTSCCC-------------------------------------------------------SSCHH
T ss_pred hcCCCEEEEEecchhccCCC-------------------------------------------------------Ccchh
Confidence 2667999999976542110 12357
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCC
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~ 263 (570)
|+.||+..|.+.+.+ ..++++++++||.|.++.
T Consensus 160 Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~ 197 (324)
T 3u9l_A 160 YFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGT 197 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC----
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCc
Confidence 999999999998765 348999999999997643
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=1.2e-16 Score=158.22 Aligned_cols=216 Identities=13% Similarity=0.051 Sum_probs=143.9
Q ss_pred cHHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccC
Q 008324 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 5 ~i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
+...-++||+|+||||||+||++++++|++.| .+|+++.|+. +.++ + .
T Consensus 12 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G---~~V~~~~r~~------~~~~-~----------------------~ 59 (249)
T 1o5i_A 12 HMELGIRDKGVLVLAASRGIGRAVADVLSQEG---AEVTICARNE------ELLK-R----------------------S 59 (249)
T ss_dssp ----CCTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCH------HHHH-H----------------------T
T ss_pred hHHhccCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEcCCH------HHHH-h----------------------h
Confidence 45567889999999999999999999999998 6788998864 1111 1 1
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--cCc
Q 008324 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--VKL 154 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~l 154 (570)
.++.++ +|+.+ +.+.....+.++|+|||+||.... .+.++..+++|+.|+.++.+.+.. + .+.
T Consensus 60 ~~~~~~-~D~~~------~~~~~~~~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~ 132 (249)
T 1o5i_A 60 GHRYVV-CDLRK------DLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGW 132 (249)
T ss_dssp CSEEEE-CCTTT------CHHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CCeEEE-eeHHH------HHHHHHHHhcCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 345667 99831 222222333489999999997542 234677889999998877655432 1 256
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||...+... .....|+.|
T Consensus 133 g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~s 156 (249)
T 1o5i_A 133 GRIVAITSFSVISPI--------------------------------------------------------ENLYTSNSA 156 (249)
T ss_dssp EEEEEECCGGGTSCC--------------------------------------------------------TTBHHHHHH
T ss_pred cEEEEEcchHhcCCC--------------------------------------------------------CCCchHHHH
Confidence 899999998655321 123579999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHH-HHhcCCceeeecCCCeeeeeeehHHH
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFV-ASAQGNLRCLVGETKVIMDVIPVDMV 308 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~-~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
|+..+.+.+.. ..+++++++||+.|.++.... +.+ .... ...... ....+++++|+
T Consensus 157 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~------~~~~~~~~~~~---------p~~~~~~~~dv 218 (249)
T 1o5i_A 157 RMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE---LLS------EEKKKQVESQI---------PMRRMAKPEEI 218 (249)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH---HSC------HHHHHHHHTTS---------TTSSCBCHHHH
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccc---cch------hhHHHHHHhcC---------CCCCCcCHHHH
Confidence 99999888754 358999999999998864311 000 0111 111111 11246789999
Q ss_pred HHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|++++.++..... ...+++|++.++
T Consensus 219 A~~i~~l~s~~~~-~~tG~~~~vdgG 243 (249)
T 1o5i_A 219 ASVVAFLCSEKAS-YLTGQTIVVDGG 243 (249)
T ss_dssp HHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHcCcccc-CCCCCEEEECCC
Confidence 9999988753322 223789999887
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.73 E-value=4.3e-17 Score=163.26 Aligned_cols=222 Identities=12% Similarity=0.128 Sum_probs=150.6
Q ss_pred HHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 008324 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
-...++||+||||||+|+||++++++|++.| .+|+++.|+.... ..
T Consensus 8 ~~~~~~~k~vlVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~-------------------------------~~ 53 (269)
T 3vtz_A 8 HMEEFTDKVAIVTGGSSGIGLAVVDALVRYG---AKVVSVSLDEKSD-------------------------------VN 53 (269)
T ss_dssp --CTTTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCC--C-------------------------------TT
T ss_pred cccCCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCchhc-------------------------------cC
Confidence 4567899999999999999999999999999 6788888875432 13
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-
Q 008324 86 KITFVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK- 150 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~- 150 (570)
.+..+.+|+++ .+..+.+++ .+|+|||+||.... .+.++..+++|+.|+.++++++..
T Consensus 54 ~~~~~~~Dv~~-------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 126 (269)
T 3vtz_A 54 VSDHFKIDVTN-------EEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPV 126 (269)
T ss_dssp SSEEEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ceeEEEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 56678999995 333334433 79999999997542 234677789999999999988765
Q ss_pred c--cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 008324 151 C--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (570)
Q Consensus 151 ~--~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
+ .+..++|++||...+... ...
T Consensus 127 ~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~ 150 (269)
T 3vtz_A 127 MLAIGHGSIINIASVQSYAAT--------------------------------------------------------KNA 150 (269)
T ss_dssp HHHHTCEEEEEECCGGGTSBC--------------------------------------------------------TTC
T ss_pred HHHcCCCEEEEECchhhccCC--------------------------------------------------------CCC
Confidence 2 255789999998654321 123
Q ss_pred chHHHHHHHHHHHHHHh----ccCCcEEEEecCceecCCCCCCCccc--cCccchHHHHHHHhcCCceeeecCCCeeeee
Q 008324 229 NTYVFTKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWV--EDLKTINTLFVASAQGNLRCLVGETKVIMDV 302 (570)
Q Consensus 229 n~Y~~sK~~aE~lv~~~----~~~lp~~IvRPsiV~g~~~ep~~gw~--~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
..|+.||+..|.+.+.+ ..++++..++|+.|.++......... ...............+ .....+
T Consensus 151 ~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~ 221 (269)
T 3vtz_A 151 AAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQ---------HPMGRI 221 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHH---------STTSSC
T ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhc---------CCCCCC
Confidence 57999999999998764 34799999999999875321100000 0000001111111111 112345
Q ss_pred eehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
..++|+|++++.++..... .-.++++++.+|
T Consensus 222 ~~pedvA~~v~~L~s~~~~-~itG~~i~vdGG 252 (269)
T 3vtz_A 222 GRPEEVAEVVAFLASDRSS-FITGACLTVDGG 252 (269)
T ss_dssp BCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHhCCccC-CCcCcEEEECCC
Confidence 7899999999988864332 223789999987
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=7.7e-17 Score=159.82 Aligned_cols=219 Identities=16% Similarity=0.130 Sum_probs=146.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+... .+.+.++ . ..++.+
T Consensus 4 l~~k~vlVTGas~giG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~~-------------~--------~~~~~~ 56 (253)
T 1hxh_A 4 LQGKVALVTGGASGVGLEVVKLLLGEG---AKVAFSDINEAA---GQQLAAE-------------L--------GERSMF 56 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEECSCHHH---HHHHHHH-------------H--------CTTEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH-------------c--------CCceEE
Confidence 579999999999999999999999998 678888886421 1111111 1 256889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~ 152 (570)
+.+|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++.+.+.. + .
T Consensus 57 ~~~D~~~-------~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~ 129 (253)
T 1hxh_A 57 VRHDVSS-------EADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET 129 (253)
T ss_dssp ECCCTTC-------HHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHc
Confidence 9999995 33333333 357999999997542 244677899999998887776543 2 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+ .++|++||...+... +....|+
T Consensus 130 ~-g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 152 (253)
T 1hxh_A 130 G-GSIINMASVSSWLPI--------------------------------------------------------EQYAGYS 152 (253)
T ss_dssp C-EEEEEECCGGGTSCC--------------------------------------------------------TTBHHHH
T ss_pred C-CEEEEEcchhhcCCC--------------------------------------------------------CCCccHH
Confidence 4 899999998654321 1235799
Q ss_pred HHHHHHHHHHHHh-----cc--CCcEEEEecCceecCCCCC-CCccccCccchHHHHHHHhcCCceeeecCCCeeeeeee
Q 008324 233 FTKTMGEMLMQQS-----KE--NLSLVIIRPTVVSGTYKEP-FPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~--~lp~~IvRPsiV~g~~~ep-~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.||+..|.+++.. .. +++++++||+.|+++.... .+ +.. .... ..... .......+..
T Consensus 153 ~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~--~~~~---~~~~~------~~~p~~~~~~ 218 (253)
T 1hxh_A 153 ASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLP---KGV--SKEM---VLHDP------KLNRAGRAYM 218 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSC---TTC--CHHH---HBCBT------TTBTTCCEEC
T ss_pred HHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccc---hhh--hHHH---Hhhhh------ccCccCCCCC
Confidence 9999999988765 23 8999999999998864311 00 000 0000 00000 0001124688
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.+|+|++++.++..... .-.++++++.+|
T Consensus 219 ~~dvA~~~~~l~s~~~~-~~tG~~~~vdgG 247 (253)
T 1hxh_A 219 PERIAQLVLFLASDESS-VMSGSELHADNS 247 (253)
T ss_dssp HHHHHHHHHHHHSGGGT-TCCSCEEEESSS
T ss_pred HHHHHHHHHHHcCcccc-CCCCcEEEECCC
Confidence 99999999988864322 223788998876
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.2e-16 Score=160.82 Aligned_cols=222 Identities=17% Similarity=0.189 Sum_probs=150.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.| .+|+++.|+... .+.+.+ +. ..++.+
T Consensus 25 l~~k~vlVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~---~~~~~~-------------~~--------~~~~~~ 77 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRATAELFAKNG---AYVVVADVNEDA---AVRVAN-------------EI--------GSKAFG 77 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSHHH---HHHHHH-------------HH--------CTTEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHH-------------Hh--------CCceEE
Confidence 578999999999999999999999999 678888886422 111111 11 357889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 78 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~ 150 (277)
T 4dqx_A 78 VRVDVSS-------AKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRN 150 (277)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 9999995 333334443 79999999997532 2456778899999999999888542 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 151 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 174 (277)
T 4dqx_A 151 GGGSIINTTSYTATSAI--------------------------------------------------------ADRTAYV 174 (277)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTBHHHH
T ss_pred CCcEEEEECchhhCcCC--------------------------------------------------------CCChhHH
Confidence 45689999997543211 1235799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.+ ..++++.+++|+.|.++... ..................+ .....+..++|
T Consensus 175 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~---~~~~~~~~~~~~~~~~~~~---------~~~~r~~~ped 242 (277)
T 4dqx_A 175 ASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFT---KIFAEAKDPAKLRSDFNAR---------AVMDRMGTAEE 242 (277)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH---HHHHTCSCHHHHHHHHHTT---------STTCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhh---hhcccccchhHHHHHHHhc---------CcccCCcCHHH
Confidence 9999999988755 34799999999999775310 0000001111111112211 11234678999
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++.++..... .-.++++++.+|
T Consensus 243 vA~~v~~L~s~~~~-~itG~~i~vdGG 268 (277)
T 4dqx_A 243 IAEAMLFLASDRSR-FATGSILTVDGG 268 (277)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESSS
T ss_pred HHHHHHHHhCCccC-CCcCCEEEECCc
Confidence 99999988864332 223789999887
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.8e-17 Score=165.45 Aligned_cols=232 Identities=16% Similarity=0.202 Sum_probs=153.1
Q ss_pred HHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 008324 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
+...++||+++||||+|+||++++++|++.| .+|+++.|+... .+.+.++ +++. ..
T Consensus 5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------~~~~---------~~ 60 (264)
T 3ucx_A 5 MGGLLTDKVVVISGVGPALGTTLARRCAEQG---ADLVLAARTVER---LEDVAKQ---------VTDT---------GR 60 (264)
T ss_dssp --CTTTTCEEEEESCCTTHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHHT---------TC
T ss_pred cCCCcCCcEEEEECCCcHHHHHHHHHHHHCc---CEEEEEeCCHHH---HHHHHHH---------HHhc---------CC
Confidence 4456899999999999999999999999999 678888886432 1222211 1111 35
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHH
Q 008324 86 KITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKK 150 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~----f----~~~~~~~~~~Nv~gt~~ll~la~~ 150 (570)
++.++.+|+++ .+..+.++ ..+|++||+||... + .+.++..+++|+.|+.++++.+..
T Consensus 61 ~~~~~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 133 (264)
T 3ucx_A 61 RALSVGTDITD-------DAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTP 133 (264)
T ss_dssp CEEEEECCTTC-------HHHHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHH
T ss_pred cEEEEEcCCCC-------HHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 78899999995 34333443 36899999998742 1 145677899999999999988764
Q ss_pred c--cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 008324 151 C--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (570)
Q Consensus 151 ~--~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
. ++-.++|++||....... ...
T Consensus 134 ~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~ 157 (264)
T 3ucx_A 134 ALEESKGAVVNVNSMVVRHSQ--------------------------------------------------------AKY 157 (264)
T ss_dssp HHHHHTCEEEEECCGGGGCCC--------------------------------------------------------TTC
T ss_pred HHHHcCCEEEEECcchhccCC--------------------------------------------------------Ccc
Confidence 2 112589999997543211 123
Q ss_pred chHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccc-cCc-cchHHHHHHHhcCCceeeecCCCeeee
Q 008324 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWV-EDL-KTINTLFVASAQGNLRCLVGETKVIMD 301 (570)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~-~~~-~~~~~~i~~~~~G~~~~~~~~~~~~~d 301 (570)
..|+.||+..+.+.+.+ ..++++..++|+.|.++......... ... ............+ .....
T Consensus 158 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r 228 (264)
T 3ucx_A 158 GAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAG---------SDLKR 228 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTT---------SSSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhcc---------CCccc
Confidence 57999999999988765 35799999999999875431100000 000 0011112222222 12335
Q ss_pred eeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 302 ~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+..++|+|++++.++.+... .-.++++++.+|
T Consensus 229 ~~~p~dvA~~v~~L~s~~~~-~itG~~i~vdGG 260 (264)
T 3ucx_A 229 LPTEDEVASAILFMASDLAS-GITGQALDVNCG 260 (264)
T ss_dssp CCBHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred CCCHHHHHHHHHHHcCcccc-CCCCCEEEECCC
Confidence 67899999999988864332 223789999887
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.1e-16 Score=159.67 Aligned_cols=221 Identities=15% Similarity=0.139 Sum_probs=148.1
Q ss_pred cCCCEEEEECCcch-hHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 10 LENKTILVSGVTGF-VAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGF-lG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
++||+|+||||||+ ||++++++|++.| .+|+++.|+.... +.+. +.+++. ...++.
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G---~~V~~~~r~~~~~---~~~~---------~~l~~~--------~~~~~~ 76 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEG---ADVVISDYHERRL---GETR---------DQLADL--------GLGRVE 76 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHH---------HHHHTT--------CSSCEE
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCC---CEEEEecCCHHHH---HHHH---------HHHHhc--------CCCceE
Confidence 68999999999985 9999999999998 6788888865321 1111 111111 125789
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~--- 151 (570)
++.+|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 77 ~~~~Dl~~-------~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 149 (266)
T 3o38_A 77 AVVCDVTS-------TEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRG 149 (266)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred EEEeCCCC-------HHHHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 99999995 33333443 368999999997542 2446778999999999999988763
Q ss_pred -cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
++..++|++||....... .....
T Consensus 150 ~~~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~ 173 (266)
T 3o38_A 150 VDHGGVIVNNASVLGWRAQ--------------------------------------------------------HSQSH 173 (266)
T ss_dssp SSCCEEEEEECCGGGTCCC--------------------------------------------------------TTCHH
T ss_pred cCCCeEEEEeCCHHHcCCC--------------------------------------------------------CCCch
Confidence 244689999987543211 12357
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..|.+++.+ ..++++..++|+.|.++..+.... ..... ..........+.++
T Consensus 174 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--------~~~~~---------~~~~~~~~~r~~~~ 236 (266)
T 3o38_A 174 YAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSS--------SELLD---------RLASDEAFGRAAEP 236 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC----------------------------------CCTTSSCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCc--------HHHHH---------HHHhcCCcCCCCCH
Confidence 999999999998754 358999999999998765321100 00000 01111122356789
Q ss_pred HHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|+|++++.++..... .-.++++++.+|
T Consensus 237 ~dva~~i~~l~s~~~~-~~tG~~i~vdgG 264 (266)
T 3o38_A 237 WEVAATIAFLASDYSS-YMTGEVVSVSSQ 264 (266)
T ss_dssp HHHHHHHHHHHSGGGT-TCCSCEEEESSC
T ss_pred HHHHHHHHHHcCcccc-CccCCEEEEcCC
Confidence 9999999988864332 224789999876
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=4e-17 Score=160.55 Aligned_cols=208 Identities=10% Similarity=0.157 Sum_probs=137.3
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+|+||||+|+||++++++|++.|.. .+|+++.|+..... .+. +. ...++.++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~-~~V~~~~r~~~~~~---~l~-------------~~--------~~~~~~~~ 56 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNI-RHIIATARDVEKAT---ELK-------------SI--------KDSRVHVL 56 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTC-CEEEEEESSGGGCH---HHH-------------TC--------CCTTEEEE
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCC-cEEEEEecCHHHHH---HHH-------------hc--------cCCceEEE
Confidence 5799999999999999999999998732 46888888754321 111 00 02578899
Q ss_pred eccCCCCCCCCCchhhHHHHhC---------CccEEEEcCccCC-c-------cccHHHHHHHhHHHHHHHHHHHHHc--
Q 008324 91 PGDISSEDLGLKDSNLKEELWN---------ELDIMVNSAAITK-F-------DERYDVAFGINTLGVIHLVNFAKKC-- 151 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~---------~vdiViH~AA~v~-f-------~~~~~~~~~~Nv~gt~~ll~la~~~-- 151 (570)
.+|+++ .+..+.+++ ++|+|||+||... . .+.++..+++|+.|+.++++++...
T Consensus 57 ~~D~~~-------~~~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~ 129 (250)
T 1yo6_A 57 PLTVTC-------DKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLK 129 (250)
T ss_dssp ECCTTC-------HHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHH
T ss_pred EeecCC-------HHHHHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 999994 333344444 7999999999765 1 2346778999999999999887653
Q ss_pred -c------C-----ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccc
Q 008324 152 -V------K-----LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGT 219 (570)
Q Consensus 152 -~------~-----l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 219 (570)
. + ..++|++||...+.... .+..++
T Consensus 130 ~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~---~~~~~~---------------------------------------- 166 (250)
T 1yo6_A 130 NAASKESGDQLSVSRAAVITISSGLGSITDN---TSGSAQ---------------------------------------- 166 (250)
T ss_dssp HHHHSSCSSCCCTTTCEEEEECCGGGCSTTC---CSTTSS----------------------------------------
T ss_pred hcccccCCCcccCCCcEEEEeccCccccCCc---cccccc----------------------------------------
Confidence 1 2 67899999986543211 000000
Q ss_pred cccccCCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeec
Q 008324 220 ERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG 294 (570)
Q Consensus 220 ~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~ 294 (570)
.....|+.||+..|.+++.+ ..+++++++||+.|.++....
T Consensus 167 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---------------------------- 212 (250)
T 1yo6_A 167 ------FPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK---------------------------- 212 (250)
T ss_dssp ------SCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----------------------------------
T ss_pred ------CCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC----------------------------
Confidence 12357999999999998765 347999999999987753210
Q ss_pred CCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecC
Q 008324 295 ETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGS 333 (570)
Q Consensus 295 ~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s 333 (570)
..+++.+++|++++.++..... ...+..+.+.+
T Consensus 213 -----~~~~~~~~~a~~~~~~~~~~~~-~~~G~~~~~~g 245 (250)
T 1yo6_A 213 -----NAALTVEQSTAELISSFNKLDN-SHNGRFFMRNL 245 (250)
T ss_dssp -----------HHHHHHHHHHHTTCCG-GGTTCEEETTE
T ss_pred -----CCCCCHHHHHHHHHHHHhcccc-cCCCeEEEECC
Confidence 1357899999999998853221 11245555443
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.1e-16 Score=160.95 Aligned_cols=222 Identities=13% Similarity=0.064 Sum_probs=149.1
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
-++||+|+||||+|+||++++++|++.| .+|+++.|+.... +.+.+ +. ..++.
T Consensus 26 ~l~gk~vlVTGas~gIG~aia~~la~~G---~~V~~~~r~~~~~---~~~~~-------------~~--------~~~~~ 78 (277)
T 3gvc_A 26 DLAGKVAIVTGAGAGIGLAVARRLADEG---CHVLCADIDGDAA---DAAAT-------------KI--------GCGAA 78 (277)
T ss_dssp -CTTCEEEETTTTSTHHHHHHHHHHHTT---CEEEEEESSHHHH---HHHHH-------------HH--------CSSCE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHH-------------Hc--------CCcce
Confidence 3789999999999999999999999999 6788888864221 11111 11 25788
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~--- 151 (570)
++.+|+++ .+..+.++ .++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 79 ~~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~ 151 (277)
T 3gvc_A 79 ACRVDVSD-------EQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIE 151 (277)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 99999995 33333433 378999999998643 2456778999999999999987652
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.++|++||....... +....|
T Consensus 152 ~~~g~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 175 (277)
T 3gvc_A 152 RGGGAIVNLSSLAGQVAV--------------------------------------------------------GGTGAY 175 (277)
T ss_dssp TTCEEEEEECCGGGTSCC--------------------------------------------------------TTBHHH
T ss_pred cCCcEEEEEcchhhccCC--------------------------------------------------------CCchhH
Confidence 245689999997543211 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCcccc-Cc-cchHHHHHHHhcCCceeeecCCCeeeeeee
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVE-DL-KTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~-~~-~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
+.||+..+.+.+.. ..++++.+++|+.|.++..+......+ .. ......+... ....+..
T Consensus 176 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~r~~~ 242 (277)
T 3gvc_A 176 GMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIAR-------------LQGRMAA 242 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHH-------------HHSSCBC
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhc-------------cccCCCC
Confidence 99999999988754 358999999999998864311000000 00 0000000000 0123578
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++|+|++++.++.+... .-.++++++.+|
T Consensus 243 pedvA~~v~~L~s~~a~-~itG~~i~vdGG 271 (277)
T 3gvc_A 243 PEEMAGIVVFLLSDDAS-MITGTTQIADGG 271 (277)
T ss_dssp HHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHHcCCccC-CccCcEEEECCc
Confidence 99999999998864332 223789999887
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.8e-16 Score=157.99 Aligned_cols=210 Identities=13% Similarity=0.107 Sum_probs=141.7
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.| .+|+++.|+.... .+.+.+ .++.+
T Consensus 25 l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~--~~~~~~------------------------~~~~~ 75 (260)
T 3gem_A 25 LSSAPILITGASQRVGLHCALRLLEHG---HRVIISYRTEHAS--VTELRQ------------------------AGAVA 75 (260)
T ss_dssp --CCCEEESSTTSHHHHHHHHHHHHTT---CCEEEEESSCCHH--HHHHHH------------------------HTCEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCChHHH--HHHHHh------------------------cCCeE
Confidence 678999999999999999999999999 5688899976532 122110 23678
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc------cccHHHHHHHhHHHHHHHHHHHHHc---cC
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f------~~~~~~~~~~Nv~gt~~ll~la~~~---~~ 153 (570)
+.+|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++++.+... .+
T Consensus 76 ~~~Dv~~-------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~ 148 (260)
T 3gem_A 76 LYGDFSC-------ETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE 148 (260)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS
T ss_pred EECCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999995 33333443 369999999997532 1345678999999999999988652 24
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||....... .....|+.
T Consensus 149 ~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 172 (260)
T 3gem_A 149 VADIVHISDDVTRKGS--------------------------------------------------------SKHIAYCA 172 (260)
T ss_dssp SCEEEEECCGGGGTCC--------------------------------------------------------SSCHHHHH
T ss_pred CcEEEEECChhhcCCC--------------------------------------------------------CCcHhHHH
Confidence 5689999997543221 12357999
Q ss_pred HHHHHHHHHHHh----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHH
Q 008324 234 TKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (570)
Q Consensus 234 sK~~aE~lv~~~----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
||+..+.+.+.+ ..++++..++|+.|.++...+ +.+. ....... ...-+..++|+|
T Consensus 173 sKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~-~~~~----------~~~~~~~---------p~~r~~~~edva 232 (260)
T 3gem_A 173 TKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDD-AAYR----------ANALAKS---------ALGIEPGAEVIY 232 (260)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC--------------------------C---------CSCCCCCTHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCC-HHHH----------HHHHhcC---------CCCCCCCHHHHH
Confidence 999999888754 346999999999997653211 1111 0111110 112245689999
Q ss_pred HHHHHHHHHhhCCCCCCceEEecCC
Q 008324 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++.++. ...-.++++++.+|
T Consensus 233 ~~v~~L~~---~~~itG~~i~vdGG 254 (260)
T 3gem_A 233 QSLRYLLD---STYVTGTTLTVNGG 254 (260)
T ss_dssp HHHHHHHH---CSSCCSCEEEESTT
T ss_pred HHHHHHhh---CCCCCCCEEEECCC
Confidence 99998873 22223789999888
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.73 E-value=8.5e-17 Score=159.92 Aligned_cols=223 Identities=11% Similarity=0.083 Sum_probs=149.6
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
-++||+++||||+|+||++++++|++.| .+|+++.|+.... +.+.+++ ++ ...++.
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------~~---------~~~~~~ 58 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEG---ARVVITGRTKEKL---EEAKLEI---------EQ---------FPGQIL 58 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------CC---------STTCEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hh---------cCCcEE
Confidence 4679999999999999999999999999 6788888865321 2222111 00 135788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~--- 151 (570)
++.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 59 ~~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~ 131 (257)
T 3imf_A 59 TVQMDVRN-------TDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIE 131 (257)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 99999995 333334433 78999999996432 2456778999999999999988431
Q ss_pred -cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+..++|++||....... +....
T Consensus 132 ~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 155 (257)
T 3imf_A 132 KGIKGNIINMVATYAWDAG--------------------------------------------------------PGVIH 155 (257)
T ss_dssp HTCCCEEEEECCGGGGSCC--------------------------------------------------------TTCHH
T ss_pred hCCCcEEEEECchhhccCC--------------------------------------------------------CCcHH
Confidence 235689999997544221 12357
Q ss_pred HHHHHHHHHHHHHHh----c--cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeee
Q 008324 231 YVFTKTMGEMLMQQS----K--ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~----~--~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
|+.||+..+.+.+.. . .++++..++|+.|.++..... .|... ... ...... .....+..
T Consensus 156 Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~-~~~~~-~~~----~~~~~~---------~p~~r~~~ 220 (257)
T 3imf_A 156 SAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADK-LWISE-EMA----KRTIQS---------VPLGRLGT 220 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC---------CCS----HHHHTT---------STTCSCBC
T ss_pred HHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhh-cccCH-HHH----HHHHhc---------CCCCCCcC
Confidence 999999988887654 2 389999999999988643210 11110 000 011111 11234678
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.+|+|++++.++.+... .-.++++++.+|
T Consensus 221 pedvA~~v~~L~s~~~~-~itG~~i~vdGG 249 (257)
T 3imf_A 221 PEEIAGLAYYLCSDEAA-YINGTCMTMDGG 249 (257)
T ss_dssp HHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHHcCchhc-CccCCEEEECCC
Confidence 99999999988864332 223789999887
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.73 E-value=8.5e-17 Score=160.89 Aligned_cols=215 Identities=15% Similarity=0.172 Sum_probs=146.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.| .+|+++.|+.... .....
T Consensus 26 l~gk~vlVTGas~gIG~aia~~la~~G---~~V~~~~r~~~~~--------------------------------~~~~~ 70 (266)
T 3uxy_A 26 FEGKVALVTGAAGGIGGAVVTALRAAG---ARVAVADRAVAGI--------------------------------AADLH 70 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEECSSCCTTS--------------------------------CCSEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH--------------------------------Hhhhc
Confidence 679999999999999999999999999 6788888865332 12234
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 71 ~~~Dv~~-------~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 143 (266)
T 3uxy_A 71 LPGDLRE-------AAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAA 143 (266)
T ss_dssp CCCCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred cCcCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 5789984 33333332 479999999998642 2456778899999999999988421 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+... .....|+
T Consensus 144 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 167 (266)
T 3uxy_A 144 GGGAIVNVASCWGLRPG--------------------------------------------------------PGHALYC 167 (266)
T ss_dssp TCEEEEEECCSBTTBCC--------------------------------------------------------TTBHHHH
T ss_pred CCcEEEEECCHHhCCCC--------------------------------------------------------CCChHHH
Confidence 56799999997543211 1235799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..|.+.+.+ ..++++.+++|+.|.++..... +................+ .....+..++|
T Consensus 168 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~---------~p~~r~~~ped 236 (266)
T 3uxy_A 168 LTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTG--FAKRGFDPDRAVAELGRT---------VPLGRIAEPED 236 (266)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHH--HHHTTCCHHHHHHHHHTT---------STTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhh--hhcccccchHHHHHHHhc---------CCCCCCcCHHH
Confidence 9999999988765 3489999999999987532110 000000111111222222 12235678999
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++.++..... .-.++++++.+|
T Consensus 237 vA~~v~~L~s~~~~-~itG~~i~vdGG 262 (266)
T 3uxy_A 237 IADVVLFLASDAAR-YLCGSLVEVNGG 262 (266)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCchhc-CCcCCEEEECcC
Confidence 99999988864332 223789999887
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.8e-16 Score=160.72 Aligned_cols=222 Identities=11% Similarity=0.104 Sum_probs=150.0
Q ss_pred hhcCCCEEEEECCcch--hHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 008324 8 EFLENKTILVSGVTGF--VAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 8 ~~~~~k~VlITGaTGF--lG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
.-++||+|+||||+|+ ||++++++|++.| .+|++..|+.+.....+.+. ++ ..
T Consensus 27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~~-------------~~---------~~ 81 (293)
T 3grk_A 27 GLLQGKRGLILGVANNRSIAWGIAKAAREAG---AELAFTYQGDALKKRVEPLA-------------EE---------LG 81 (293)
T ss_dssp CTTTTCEEEEECCCSSSSHHHHHHHHHHHTT---CEEEEEECSHHHHHHHHHHH-------------HH---------HT
T ss_pred ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHHH-------------Hh---------cC
Confidence 3478999999999999 9999999999999 67888888742221111111 11 14
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCC-------c----cccHHHHHHHhHHHHHHHHHH
Q 008324 86 KITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK-------F----DERYDVAFGINTLGVIHLVNF 147 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~-------f----~~~~~~~~~~Nv~gt~~ll~l 147 (570)
++.++.+|+++ .+..+.++ ..+|++||+||... + .+.++..+++|+.|+.++++.
T Consensus 82 ~~~~~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~ 154 (293)
T 3grk_A 82 AFVAGHCDVAD-------AASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRR 154 (293)
T ss_dssp CEEEEECCTTC-------HHHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred CceEEECCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHH
Confidence 67889999995 44334444 36999999999763 1 245677899999999999998
Q ss_pred HHH-ccCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCC
Q 008324 148 AKK-CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHG 226 (570)
Q Consensus 148 a~~-~~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 226 (570)
+.. +.+-.++|++||....... .
T Consensus 155 ~~~~m~~~g~Iv~isS~~~~~~~--------------------------------------------------------~ 178 (293)
T 3grk_A 155 AEKLMADGGSILTLTYYGAEKVM--------------------------------------------------------P 178 (293)
T ss_dssp HHHHTTTCEEEEEEECGGGTSBC--------------------------------------------------------T
T ss_pred HHHhccCCCEEEEEeehhhccCC--------------------------------------------------------C
Confidence 876 3344689999987544321 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeee
Q 008324 227 WPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMD 301 (570)
Q Consensus 227 ~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d 301 (570)
....|+.||+..+.+.+.+ ..++++..++|+.|.++.....+ .............. ...
T Consensus 179 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~~p---------~~r 242 (293)
T 3grk_A 179 NYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIG-------DFRYILKWNEYNAP---------LRR 242 (293)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------C-------CHHHHHHHHHHHST---------TSS
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhccc-------chHHHHHHHHhcCC---------CCC
Confidence 2357999999999988765 35899999999999886543211 11111111111110 123
Q ss_pred eeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 302 ~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+...+|+|++++.++..... .-.++++++.+|
T Consensus 243 ~~~pedvA~~v~~L~s~~~~-~itG~~i~vdGG 274 (293)
T 3grk_A 243 TVTIDEVGDVGLYFLSDLSR-SVTGEVHHADSG 274 (293)
T ss_dssp CCCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred CCCHHHHHHHHHHHcCcccc-CCcceEEEECCC
Confidence 46789999999988864332 223789999887
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.73 E-value=3.2e-16 Score=157.16 Aligned_cols=220 Identities=13% Similarity=0.059 Sum_probs=149.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||++++++|++.| .+|+++.|.... ..+.+.++ +++ ...++.+
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~~~~~~--~~~~~~~~---------l~~---------~~~~~~~ 85 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEG---AAVALTYVNAAE--RAQAVVSE---------IEQ---------AGGRAVA 85 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHH---------HHH---------TTCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCCHH--HHHHHHHH---------HHh---------cCCcEEE
Confidence 679999999999999999999999999 677777665421 11222211 111 1357889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-ccCc
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-CVKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~~~l 154 (570)
+.+|+++ .+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+.. +++-
T Consensus 86 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~ 158 (271)
T 3v2g_A 86 IRADNRD-------AEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDG 158 (271)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC
Confidence 9999995 343344443 79999999997542 245677899999999999998876 3445
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||....... . +....|+.|
T Consensus 159 g~iv~isS~~~~~~~--------~-----------------------------------------------~~~~~Y~as 183 (271)
T 3v2g_A 159 GRIITIGSNLAELVP--------W-----------------------------------------------PGISLYSAS 183 (271)
T ss_dssp CEEEEECCGGGTCCC--------S-----------------------------------------------TTCHHHHHH
T ss_pred CEEEEEeChhhccCC--------C-----------------------------------------------CCchHHHHH
Confidence 689999885321100 0 123579999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHH
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..+.+.+.. ..++++..++|+.|.++.....+.+ ..... ... ....+...+|+|
T Consensus 184 Kaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~------~~~~~----~~~---------~~~r~~~pedvA 244 (271)
T 3v2g_A 184 KAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDH------AEAQR----ERI---------ATGSYGEPQDIA 244 (271)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSS------HHHHH----HTC---------TTSSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchh------HHHHH----hcC---------CCCCCCCHHHHH
Confidence 99999987754 3489999999999988765322111 11111 111 011246789999
Q ss_pred HHHHHHHHHhhCCCCCCceEEecCC
Q 008324 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++.++..... --.|+++++.+|
T Consensus 245 ~~v~fL~s~~~~-~itG~~i~vdGG 268 (271)
T 3v2g_A 245 GLVAWLAGPQGK-FVTGASLTIDGG 268 (271)
T ss_dssp HHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHhCcccC-CccCCEEEeCcC
Confidence 999988753332 223789999876
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.73 E-value=1.8e-16 Score=157.53 Aligned_cols=222 Identities=16% Similarity=0.148 Sum_probs=151.5
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
-++||+++||||+|+||++++++|++.| .+|+++.|+... .+.+. ++. ..++.
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~ 57 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGG---AEVLLTGRNESN---IARIR-------------EEF--------GPRVH 57 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HHH--------GGGEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------HHh--------CCcce
Confidence 3689999999999999999999999999 678888886422 12221 111 25788
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc-cC
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VK 153 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~ 153 (570)
++.+|+++ .+..+.++ ..+|++||+||.... .+.++..+++|+.|+.++++.+... .+
T Consensus 58 ~~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 130 (255)
T 4eso_A 58 ALRSDIAD-------LNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE 130 (255)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred EEEccCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc
Confidence 99999995 33333332 479999999997642 2456778999999999999998763 23
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
-.++|++||....... +....|+.
T Consensus 131 ~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 154 (255)
T 4eso_A 131 GGSIVFTSSVADEGGH--------------------------------------------------------PGMSVYSA 154 (255)
T ss_dssp EEEEEEECCGGGSSBC--------------------------------------------------------TTBHHHHH
T ss_pred CCEEEEECChhhcCCC--------------------------------------------------------CCchHHHH
Confidence 3589999997644321 12357999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHH
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..+.+.+.. ..++++..++|+.|.++..+.. ++.+. ............. ....+...+|+
T Consensus 155 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-~~~~~--~~~~~~~~~~~~~---------p~~r~~~pedv 222 (255)
T 4eso_A 155 SKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVA-GITEA--ERAEFKTLGDNIT---------PMKRNGTADEV 222 (255)
T ss_dssp HHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCT-TSCHH--HHHHHHHHHHHHS---------TTSSCBCHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccc-cCChh--hHHHHHHHHhccC---------CCCCCcCHHHH
Confidence 999999988755 3489999999999988754321 11110 0001111111100 11235678999
Q ss_pred HHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|++++.++.+ . ..-.++++++.+|
T Consensus 223 A~~v~~L~s~-~-~~itG~~i~vdGG 246 (255)
T 4eso_A 223 ARAVLFLAFE-A-TFTTGAKLAVDGG 246 (255)
T ss_dssp HHHHHHHHHT-C-TTCCSCEEEESTT
T ss_pred HHHHHHHcCc-C-cCccCCEEEECCC
Confidence 9999988864 2 2234889999988
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=7.2e-17 Score=160.63 Aligned_cols=220 Identities=17% Similarity=0.184 Sum_probs=148.6
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEE-EcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF-VRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~l-vR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+||+|+||||+|+||++++++|++.| .+|+++ .|+... .+.+.+++ ++ ...++.+
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G---~~vv~~~~r~~~~---~~~~~~~~---------~~---------~~~~~~~ 58 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENG---YNIVINYARSKKA---ALETAEEI---------EK---------LGVKVLV 58 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESSCHHH---HHHHHHHH---------HT---------TTCCEEE
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCC---CEEEEEcCCCHHH---HHHHHHHH---------Hh---------cCCcEEE
Confidence 68999999999999999999999999 566765 565322 11211111 11 1357889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|+++ .+..+.++ ..+|++||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 59 ~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~ 131 (258)
T 3oid_A 59 VKANVGQ-------PAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKN 131 (258)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 9999995 43333443 367999999986432 2446778999999999999988542 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 132 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 155 (258)
T 3oid_A 132 GGGHIVSISSLGSIRYL--------------------------------------------------------ENYTTVG 155 (258)
T ss_dssp TCEEEEEEEEGGGTSBC--------------------------------------------------------TTCHHHH
T ss_pred CCcEEEEECchhhCCCC--------------------------------------------------------CCcHHHH
Confidence 45689999997543211 1236799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.+ ..++++..++|+.|.++.....+ ...........+. ....+..++|
T Consensus 156 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~~---------p~~r~~~~~d 219 (258)
T 3oid_A 156 VSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFP-------NREDLLEDARQNT---------PAGRMVEIKD 219 (258)
T ss_dssp HHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCT-------THHHHHHHHHHHC---------TTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcc-------cCHHHHHHHHhcC---------CCCCCcCHHH
Confidence 9999999998765 34799999999999886543221 1111122221111 1124678999
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++.++.... ..-.++++++.+|
T Consensus 220 va~~v~~L~s~~~-~~itG~~i~vdGG 245 (258)
T 3oid_A 220 MVDTVEFLVSSKA-DMIRGQTIIVDGG 245 (258)
T ss_dssp HHHHHHHHTSSTT-TTCCSCEEEESTT
T ss_pred HHHHHHHHhCccc-CCccCCEEEECCC
Confidence 9999998875322 2224789999887
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.73 E-value=6.4e-17 Score=163.04 Aligned_cols=223 Identities=13% Similarity=0.096 Sum_probs=152.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.| .+|+++.|+... .+.+.+++ .. ...++.+
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~---~~~~~~~~---------~~---------~~~~~~~ 61 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFAREG---AKVVVTARNGNA---LAELTDEI---------AG---------GGGEAAA 61 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEECCSCHHH---HHHHHHHH---------TT---------TTCCEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHHH---------Hh---------cCCcEEE
Confidence 689999999999999999999999999 678888886432 12222111 10 1357889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHHc---
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f--------~~~~~~~~~~Nv~gt~~ll~la~~~--- 151 (570)
+.+|+++ .+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 62 ~~~Dv~~-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~ 134 (280)
T 3tox_A 62 LAGDVGD-------EALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAA 134 (280)
T ss_dssp CCCCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 9999995 433344443 79999999996521 2456778999999999999987652
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.++|++||...+... + .....|
T Consensus 135 ~~~g~iv~isS~~~~~~~--------~-----------------------------------------------~~~~~Y 159 (280)
T 3tox_A 135 LGGGSLTFTSSFVGHTAG--------F-----------------------------------------------AGVAPY 159 (280)
T ss_dssp TTCEEEEEECCSBTTTBC--------C-----------------------------------------------TTCHHH
T ss_pred cCCCEEEEEcChhhCcCC--------C-----------------------------------------------CCchhH
Confidence 244689999997544110 0 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCC-CCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEP-FPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep-~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
+.||+..+.+.+.+ ..++++.+++|+.|.++.... .++.. . .......... ....+..+
T Consensus 160 ~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~---~---~~~~~~~~~~---------p~~r~~~p 224 (280)
T 3tox_A 160 AASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAA---P---ETRGFVEGLH---------ALKRIARP 224 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCC---T---HHHHHHHTTS---------TTSSCBCH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccC---H---HHHHHHhccC---------ccCCCcCH
Confidence 99999999988765 348999999999998875422 11100 0 1111111111 12246789
Q ss_pred HHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|+|++++.++..... --.++++++.+|
T Consensus 225 edvA~~v~~L~s~~a~-~itG~~i~vdGG 252 (280)
T 3tox_A 225 EEIAEAALYLASDGAS-FVTGAALLADGG 252 (280)
T ss_dssp HHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHhCcccc-CCcCcEEEECCC
Confidence 9999999998864332 223789999988
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.3e-16 Score=162.00 Aligned_cols=220 Identities=14% Similarity=0.153 Sum_probs=149.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||++++++|++.| .+|++..|+.... ..+.+.++ ++ + ...++.+
T Consensus 47 l~~k~vlVTGas~GIG~aia~~la~~G---~~V~~~~~~~~~~-~~~~~~~~---------~~-~--------~~~~~~~ 104 (294)
T 3r3s_A 47 LKDRKALVTGGDSGIGRAAAIAYAREG---ADVAINYLPAEEE-DAQQVKAL---------IE-E--------CGRKAVL 104 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECCGGGHH-HHHHHHHH---------HH-H--------TTCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCcchh-HHHHHHHH---------HH-H--------cCCcEEE
Confidence 579999999999999999999999999 6777777763321 11222211 11 1 1357889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHHc-cC
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKKC-VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~----f----~~~~~~~~~~Nv~gt~~ll~la~~~-~~ 153 (570)
+.+|+++ .+..+.++ .++|++||+||... + .+.++..+++|+.|+.++++.+... .+
T Consensus 105 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~ 177 (294)
T 3r3s_A 105 LPGDLSD-------ESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK 177 (294)
T ss_dssp CCCCTTS-------HHHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc
Confidence 9999995 33333333 47999999999743 1 2456778999999999999998763 22
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
-.++|++||...+... .....|+.
T Consensus 178 ~g~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 201 (294)
T 3r3s_A 178 GASIITTSSIQAYQPS--------------------------------------------------------PHLLDYAA 201 (294)
T ss_dssp TCEEEEECCGGGTSCC--------------------------------------------------------TTCHHHHH
T ss_pred CCEEEEECChhhccCC--------------------------------------------------------CCchHHHH
Confidence 3489999998654321 12357999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCC---CCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEP---FPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep---~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
||+..|.+.+.+ ..++++..++|+.|.++.... .+.+... . ........+...
T Consensus 202 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~----------~---------~~~~p~~r~~~p 262 (294)
T 3r3s_A 202 TKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQ----------F---------GQQTPMKRAGQP 262 (294)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTT----------T---------TTTSTTSSCBCG
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHH----------H---------HhcCCCCCCcCH
Confidence 999999988755 348999999999998864210 0011110 0 111112345678
Q ss_pred HHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|+|++++.++.....- -.++++++.+|
T Consensus 263 ~dvA~~v~~L~s~~~~~-itG~~i~vdGG 290 (294)
T 3r3s_A 263 AELAPVYVYLASQESSY-VTAEVHGVCGG 290 (294)
T ss_dssp GGGHHHHHHHHSGGGTT-CCSCEEEESTT
T ss_pred HHHHHHHHHHhCccccC-CCCCEEEECCC
Confidence 99999999888643322 23789999887
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.6e-16 Score=160.14 Aligned_cols=222 Identities=11% Similarity=0.130 Sum_probs=140.5
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
-++||+++||||+|+||++++++|++.| .+|+++.|.... ..+.+.+++ .. ...++.
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~~~~~~--~~~~~~~~~---------~~---------~~~~~~ 82 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASG---FDIAITGIGDAE--GVAPVIAEL---------SG---------LGARVI 82 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCCHH--HHHHHHHHH---------HH---------TTCCEE
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCC---CeEEEEeCCCHH--HHHHHHHHH---------Hh---------cCCcEE
Confidence 3578999999999999999999999999 678888764321 111211111 11 135789
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCC-----c----cccHHHHHHHhHHHHHHHHHHHHHc-
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK-----F----DERYDVAFGINTLGVIHLVNFAKKC- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~-----f----~~~~~~~~~~Nv~gt~~ll~la~~~- 151 (570)
++.+|++++ +..+.++ ..+|+|||+||... + .+.++..+++|+.|+.++++.+...
T Consensus 83 ~~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 155 (280)
T 4da9_A 83 FLRADLADL-------SSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAM 155 (280)
T ss_dssp EEECCTTSG-------GGHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999999954 3333333 37999999999731 1 2456777899999999998887653
Q ss_pred c--C---ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCC
Q 008324 152 V--K---LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHG 226 (570)
Q Consensus 152 ~--~---l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 226 (570)
. + ..++|++||....... +
T Consensus 156 ~~~~~~~~g~Iv~isS~~~~~~~--------------------------------------------------------~ 179 (280)
T 4da9_A 156 LASDARASRSIINITSVSAVMTS--------------------------------------------------------P 179 (280)
T ss_dssp HHHCCCCCEEEEEECCC---------------------------------------------------------------
T ss_pred HHhCCCCCCEEEEEcchhhccCC--------------------------------------------------------C
Confidence 1 1 4589999997654221 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeee
Q 008324 227 WPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMD 301 (570)
Q Consensus 227 ~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d 301 (570)
....|+.||+..+.+.+.. ..++++..++|+.|.++......+.. ......+ ......
T Consensus 180 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~---------~~~~~~~--------~~p~~r 242 (280)
T 4da9_A 180 ERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKY---------DGLIESG--------LVPMRR 242 (280)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---------------------------------------C
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhH---------HHHHhhc--------CCCcCC
Confidence 2357999999999988765 35799999999999886543221100 0000000 112234
Q ss_pred eeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 302 ~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+..++|+|++++.++..... .-.++++++.+|
T Consensus 243 ~~~pedvA~~v~~L~s~~~~-~itG~~i~vdGG 274 (280)
T 4da9_A 243 WGEPEDIGNIVAGLAGGQFG-FATGSVIQADGG 274 (280)
T ss_dssp CBCHHHHHHHHHHHHTSTTG-GGTTCEEEESTT
T ss_pred cCCHHHHHHHHHHHhCcccc-CCCCCEEEECCC
Confidence 67899999999988853221 123789999887
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.2e-16 Score=162.09 Aligned_cols=221 Identities=14% Similarity=0.042 Sum_probs=151.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.| .+|+++.|+..... .+.+++ ++. -..++.+
T Consensus 39 l~~k~vlVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~---~~~~~l---------~~~--------~~~~~~~ 95 (293)
T 3rih_A 39 LSARSVLVTGGTKGIGRGIATVFARAG---ANVAVAARSPRELS---SVTAEL---------GEL--------GAGNVIG 95 (293)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSGGGGH---HHHHHH---------TTS--------SSSCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHHH---HHHHHH---------Hhh--------CCCcEEE
Confidence 679999999999999999999999999 67889998764432 111111 110 0157889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~ 152 (570)
+.+|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++++++.. + .
T Consensus 96 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 168 (293)
T 3rih_A 96 VRLDVSD-------PGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTAS 168 (293)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH
T ss_pred EEEeCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 9999995 33333333 368999999997532 245677899999999999998842 1 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...... + + +....|+
T Consensus 169 ~~g~iV~isS~~~~~~--~------~-----------------------------------------------~~~~~Y~ 193 (293)
T 3rih_A 169 GRGRVILTSSITGPVT--G------Y-----------------------------------------------PGWSHYG 193 (293)
T ss_dssp SSCEEEEECCSBTTTB--B------C-----------------------------------------------TTCHHHH
T ss_pred CCCEEEEEeChhhccC--C------C-----------------------------------------------CCCHHHH
Confidence 5679999999753210 0 0 1235799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.+ ..++++.+++|+.|.++..... ............. ...+...+|
T Consensus 194 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---------~~~~~~~~~~~~p---------~~r~~~p~d 255 (293)
T 3rih_A 194 ASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDM---------GEEYISGMARSIP---------MGMLGSPVD 255 (293)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHT---------CHHHHHHHHTTST---------TSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhc---------cHHHHHHHHhcCC---------CCCCCCHHH
Confidence 9999999988754 3589999999999988543110 0122222222221 112456899
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++.++..... .-.++++++.+|
T Consensus 256 vA~~v~fL~s~~a~-~itG~~i~vdGG 281 (293)
T 3rih_A 256 IGHLAAFLATDEAG-YITGQAIVVDGG 281 (293)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCcccc-CCCCCEEEECCC
Confidence 99999988864332 223789999887
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=9.3e-17 Score=161.90 Aligned_cols=232 Identities=13% Similarity=0.112 Sum_probs=150.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||++++++|++.| .+|+++.|+.... .+.+.++ +++. ..++.+
T Consensus 27 ~~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~--~~~~~~~---------~~~~---------~~~~~~ 83 (283)
T 1g0o_A 27 LEGKVALVTGAGRGIGREMAMELGRRG---CKVIVNYANSTES--AEEVVAA---------IKKN---------GSDAAC 83 (283)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCHHH--HHHHHHH---------HHHT---------TCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCchHH--HHHHHHH---------HHHh---------CCCeEE
Confidence 679999999999999999999999998 6788888875321 1111111 1110 257889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc-cCc
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~l 154 (570)
+.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++++... ++.
T Consensus 84 ~~~D~~~-------~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 156 (283)
T 1g0o_A 84 VKANVGV-------VEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG 156 (283)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC
Confidence 9999995 33233332 479999999997643 2456778999999999999998764 445
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||........ +....|+.|
T Consensus 157 g~iv~isS~~~~~~~~-------------------------------------------------------~~~~~Y~as 181 (283)
T 1g0o_A 157 GRLILMGSITGQAKAV-------------------------------------------------------PKHAVYSGS 181 (283)
T ss_dssp CEEEEECCGGGTCSSC-------------------------------------------------------SSCHHHHHH
T ss_pred CeEEEEechhhccCCC-------------------------------------------------------CCCcchHHH
Confidence 7999999975332100 113579999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCC-CccccCc-cchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPF-PGWVEDL-KTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~-~gw~~~~-~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
|+..|.+.+.+ ..++++.+++|+.|.++..... ..+.... .........+..+. .. ....+...+|
T Consensus 182 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--p~~r~~~p~d 254 (283)
T 1g0o_A 182 KGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQ-----WS--PLRRVGLPID 254 (283)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHH-----SC--TTCSCBCHHH
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhc-----CC--CCCCCcCHHH
Confidence 99999988754 3589999999999987632110 0000000 00011111111100 00 1123578899
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++.++..... .-.++++++.+|
T Consensus 255 vA~~v~~l~s~~~~-~itG~~i~vdgG 280 (283)
T 1g0o_A 255 IARVVCFLASNDGG-WVTGKVIGIDGG 280 (283)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCcccc-CcCCCEEEeCCC
Confidence 99999988864322 223788988876
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.73 E-value=6.3e-17 Score=163.84 Aligned_cols=226 Identities=12% Similarity=0.090 Sum_probs=148.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+.... +.+. ++ ...++.+
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~~~G---~~V~~~~r~~~~~---~~~~-------------~~--------~~~~~~~ 66 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELARRG---ATVIMAVRDTRKG---EAAA-------------RT--------MAGQVEV 66 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHH-------------TT--------SSSEEEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHH-------------HH--------hcCCeeE
Confidence 679999999999999999999999998 6789999864321 1111 11 1357899
Q ss_pred EeccCCCCCCCCCchhhHHHHhC---CccEEEEcCccCCc-----cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEe
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN---ELDIMVNSAAITKF-----DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~---~vdiViH~AA~v~f-----~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vS 161 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... -.+++|++|
T Consensus 67 ~~~Dl~d-------~~~v~~~~~~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~-~~~riv~is 138 (291)
T 3rd5_A 67 RELDLQD-------LSSVRRFADGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPR-LTDRVVTVS 138 (291)
T ss_dssp EECCTTC-------HHHHHHHHHTCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGG-EEEEEEEEC
T ss_pred EEcCCCC-------HHHHHHHHHhcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHhheeEee
Confidence 9999994 444556665 67999999997532 3556788999999999999999875 456999999
Q ss_pred cceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHH
Q 008324 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (570)
Q Consensus 162 Ta~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~l 241 (570)
|...+..... .++.... ..+ ......|+.||+..+.+
T Consensus 139 S~~~~~~~~~-~~~~~~~-~~~-----------------------------------------~~~~~~Y~~sK~a~~~~ 175 (291)
T 3rd5_A 139 SMAHWPGRIN-LEDLNWR-SRR-----------------------------------------YSPWLAYSQSKLANLLF 175 (291)
T ss_dssp CGGGTTCCCC-SSCTTCS-SSC-----------------------------------------CCHHHHHHHHHHHHHHH
T ss_pred chhhccCCCC-ccccccc-ccC-----------------------------------------CCCcchHHHHHHHHHHH
Confidence 9876543211 0000000 000 01235799999999998
Q ss_pred HHHh-----ccC--CcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHH
Q 008324 242 MQQS-----KEN--LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (570)
Q Consensus 242 v~~~-----~~~--lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~ 314 (570)
.+.+ ..+ +.+..++||.|.++.....+... ...... . -...-..+.+++|++++.
T Consensus 176 ~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~---------~~~~~~-----~----~~~~~~~~~~~~A~~~~~ 237 (291)
T 3rd5_A 176 TSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKL---------GDALMS-----A----ATRVVATDADFGARQTLY 237 (291)
T ss_dssp HHHHHHHHHHTTCCCEEEEECCSGGGSCC--------------------------------------CHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHH---------HHHHHH-----H----HHHHHhCCHHHHHHHHHH
Confidence 8754 234 99999999999876543211100 000000 0 011122468999999999
Q ss_pred HHHHhhCCCCCCceEEecCC
Q 008324 315 AMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 315 a~~~~~~~~~~~~iyni~s~ 334 (570)
++... ...++++++.+|
T Consensus 238 l~~~~---~~~G~~~~vdgG 254 (291)
T 3rd5_A 238 AASQD---LPGDSFVGPRFG 254 (291)
T ss_dssp HHHSC---CCTTCEEEETTS
T ss_pred HHcCC---CCCCceeCCccc
Confidence 88742 223778887665
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.72 E-value=9.6e-17 Score=158.57 Aligned_cols=208 Identities=13% Similarity=0.166 Sum_probs=143.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.| .+|+++.|+.... +.+..
T Consensus 13 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~--------------------------------~~~~~ 57 (247)
T 1uzm_A 13 FVSRSVLVTGGNRGIGLAIAQRLAADG---HKVAVTHRGSGAP--------------------------------KGLFG 57 (247)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSSCCC--------------------------------TTSEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCChHHH--------------------------------HHhcC
Confidence 678999999999999999999999998 6789999875422 12224
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 58 ~~~D~~~-------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 130 (247)
T 1uzm_A 58 VEVDVTD-------SDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN 130 (247)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred eeccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 7899995 33333433 368999999997542 2456788999999999999988642 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... +....|+
T Consensus 131 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 154 (247)
T 1uzm_A 131 KFGRMIFIGSVSGLWGI--------------------------------------------------------GNQANYA 154 (247)
T ss_dssp TCEEEEEECCCCC-------------------------------------------------------------CCHHHH
T ss_pred CCCEEEEECCHhhccCC--------------------------------------------------------CCChhHH
Confidence 56899999997543211 1135799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..|.+.+.. ..++++++++|+.|.++..... . .......... .+ ...+++.+|
T Consensus 155 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-------~--~~~~~~~~~~----~p-----~~~~~~~~d 216 (247)
T 1uzm_A 155 ASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL-------D--ERIQQGALQF----IP-----AKRVGTPAE 216 (247)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS-------C--HHHHHHHGGG----CT-----TCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhc-------C--HHHHHHHHhc----CC-----CCCCcCHHH
Confidence 9999888887654 3589999999999976532110 0 0111111111 11 123689999
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++.++..... .-.++++++.+|
T Consensus 217 vA~~~~~l~s~~~~-~~~G~~i~vdgG 242 (247)
T 1uzm_A 217 VAGVVSFLASEDAS-YISGAVIPVDGG 242 (247)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHcCcccc-CCcCCEEEECCC
Confidence 99999988853322 223789999887
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.72 E-value=2.3e-16 Score=158.94 Aligned_cols=247 Identities=16% Similarity=0.175 Sum_probs=155.6
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCccc------HHHHHHHHHhhhhhHHHHHhhhccccccc
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS------AALRFQNEVLAKDVFNVLKEKWGTRLNSF 82 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~------~~~rl~~~l~~~~~f~~l~~~~~~~~~~~ 82 (570)
-++||+|+||||+|+||++++++|++.| .+|+++.|+..... ..++++. .. ..+..
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~--------- 68 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEG---ADIILFDICHDIETNEYPLATSRDLEE-AG-----LEVEK--------- 68 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSCCTTSCSCCCCHHHHHH-HH-----HHHHH---------
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCC---CeEEEEcccccccccccchhhhHHHHH-HH-----HHHHh---------
Confidence 3689999999999999999999999999 67888888732210 0112110 00 01111
Q ss_pred cCCceEEEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-----cccHHHHHHHhHHHHHHHHHHHHH
Q 008324 83 ISEKITFVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-----DERYDVAFGINTLGVIHLVNFAKK 150 (570)
Q Consensus 83 ~~~kv~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-----~~~~~~~~~~Nv~gt~~ll~la~~ 150 (570)
...++.++.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+..
T Consensus 69 ~~~~~~~~~~D~~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 141 (287)
T 3pxx_A 69 TGRKAYTAEVDVRD-------RAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALP 141 (287)
T ss_dssp TTSCEEEEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred cCCceEEEEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHH
Confidence 13678999999995 333334433 79999999998643 245778899999999999999876
Q ss_pred c-cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc
Q 008324 151 C-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (570)
Q Consensus 151 ~-~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
. .+-.++|++||...+..... .+..+..+ .+...
T Consensus 142 ~~~~~g~iv~isS~~~~~~~~~----~~~~~~~~-----------------------------------------~~~~~ 176 (287)
T 3pxx_A 142 YLTSGASIITTGSVAGLIAAAQ----PPGAGGPQ-----------------------------------------GPGGA 176 (287)
T ss_dssp GCCTTCEEEEECCHHHHHHHHC----CC-----C-----------------------------------------HHHHH
T ss_pred HhhcCcEEEEeccchhcccccc----cccccccC-----------------------------------------CCccc
Confidence 3 34458999999765432110 00000000 01124
Q ss_pred hHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCcc---ccCc--cchHHHHHHHhcCCceeeecCCCee
Q 008324 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGW---VEDL--KTINTLFVASAQGNLRCLVGETKVI 299 (570)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw---~~~~--~~~~~~i~~~~~G~~~~~~~~~~~~ 299 (570)
.|+.||+..+.+.+.+ ..++++..++|+.|.++.....+.+ .... ........... .... ..
T Consensus 177 ~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-~~ 248 (287)
T 3pxx_A 177 GYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFP-------AMQA-MP 248 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHGG-------GGCS-SS
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhhhh-------hhcc-cC
Confidence 6999999999988765 3489999999999988765321100 0000 00000000000 0001 11
Q ss_pred eeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 300 MDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 300 ~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
..+..++|+|++++.++.+... --.++++++.+|
T Consensus 249 ~~~~~p~dva~~v~fL~s~~a~-~itG~~i~vdGG 282 (287)
T 3pxx_A 249 TPYVEASDISNAVCFLASDESR-YVTGLQFKVDAG 282 (287)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred CCCCCHHHHHhhHheecchhhc-CCCCceEeECch
Confidence 4678999999999988864332 223789999887
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=3.4e-16 Score=156.15 Aligned_cols=222 Identities=13% Similarity=0.136 Sum_probs=151.7
Q ss_pred cCCCEEEEECCcch--hHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 10 LENKTILVSGVTGF--VAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaTGF--lG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||+|+||||+|+ ||++++++|++.| .+|+++.|+.+.....+.+. ++.+ ..++
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~-------------~~~~-------~~~~ 61 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAG---ARLIFTYAGERLEKSVHELA-------------GTLD-------RNDS 61 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTT---CEEEEEESSGGGHHHHHHHH-------------HTSS-------SCCC
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCC---CEEEEecCchHHHHHHHHHH-------------HhcC-------CCCc
Confidence 67999999999999 9999999999999 67888888754332222211 1111 1378
Q ss_pred EEEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCC-------c----cccHHHHHHHhHHHHHHHHHHHH
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK-------F----DERYDVAFGINTLGVIHLVNFAK 149 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~-------f----~~~~~~~~~~Nv~gt~~ll~la~ 149 (570)
.++.+|++++ +..+.++ ..+|+|||+||... + .+.+...+++|+.|+.++++.+.
T Consensus 62 ~~~~~D~~~~-------~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 134 (266)
T 3oig_A 62 IILPCDVTND-------AEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAAR 134 (266)
T ss_dssp EEEECCCSSS-------HHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred eEEeCCCCCH-------HHHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHH
Confidence 9999999964 3233333 36899999999753 1 13456778999999999999987
Q ss_pred Hc-cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 008324 150 KC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (570)
Q Consensus 150 ~~-~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
.. .+-.++|++||....... +..
T Consensus 135 ~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~ 158 (266)
T 3oig_A 135 PMMTEGGSIVTLTYLGGELVM--------------------------------------------------------PNY 158 (266)
T ss_dssp GGCTTCEEEEEEECGGGTSCC--------------------------------------------------------TTT
T ss_pred hhcCCCceEEEEecccccccC--------------------------------------------------------CCc
Confidence 63 334589999987543211 123
Q ss_pred chHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeee
Q 008324 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.. ..++++..++|+.|.++.....+. ............ ....+.
T Consensus 159 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~~---------~~~~~~ 222 (266)
T 3oig_A 159 NVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISD-------FNSILKDIEERA---------PLRRTT 222 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTT-------HHHHHHHHHHHS---------TTSSCC
T ss_pred chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccc-------hHHHHHHHHhcC---------CCCCCC
Confidence 57999999999988754 347999999999998865432221 111122111111 012346
Q ss_pred ehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
..+|+|++++.++..... .-.++++++.+|
T Consensus 223 ~p~dva~~v~~l~s~~~~-~~tG~~i~vdGG 252 (266)
T 3oig_A 223 TPEEVGDTAAFLFSDMSR-GITGENLHVDSG 252 (266)
T ss_dssp CHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred CHHHHHHHHHHHcCCchh-cCcCCEEEECCC
Confidence 889999999998864332 234789999887
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.7e-16 Score=162.89 Aligned_cols=170 Identities=19% Similarity=0.177 Sum_probs=119.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+||||||||+||++++++|++.| .+|++..|+.... +.+.+ .+....+ ..++.+
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G---~~Vv~~~r~~~~~---~~~~~---------~l~~~~~-------~~~~~~ 63 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQG---CKVAIADIRQDSI---DKALA---------TLEAEGS-------GPEVMG 63 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHH---------HHHHHTC-------GGGEEE
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHH---------HHHhcCC-------CCeEEE
Confidence 578999999999999999999999999 6789999975321 11111 1111111 137889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHcc---
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKCV--- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~~--- 152 (570)
+.+|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++++.+...-
T Consensus 64 ~~~Dl~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 136 (319)
T 3ioy_A 64 VQLDVAS-------REGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVER 136 (319)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EECCCCC-------HHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Confidence 9999995 33333443 368999999997532 24467789999999999999887531
Q ss_pred ------CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCC
Q 008324 153 ------KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHG 226 (570)
Q Consensus 153 ------~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 226 (570)
+-.++|++||....... +
T Consensus 137 ~~~~~~~~g~iV~isS~a~~~~~--------------------------------------------------------~ 160 (319)
T 3ioy_A 137 VKAGEQKGGHVVNTASMAAFLAA--------------------------------------------------------G 160 (319)
T ss_dssp HHTTSCCCCEEEEECCGGGTCCC--------------------------------------------------------S
T ss_pred hhccCCCCcEEEEecccccccCC--------------------------------------------------------C
Confidence 23479999997654321 1
Q ss_pred CCchHHHHHH----HHHHHHHHh-ccCCcEEEEecCceecCCC
Q 008324 227 WPNTYVFTKT----MGEMLMQQS-KENLSLVIIRPTVVSGTYK 264 (570)
Q Consensus 227 ~~n~Y~~sK~----~aE~lv~~~-~~~lp~~IvRPsiV~g~~~ 264 (570)
....|+.||+ ++|.+..++ ..++++++++|+.|.++..
T Consensus 161 ~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~ 203 (319)
T 3ioy_A 161 SPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIY 203 (319)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC----
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcc
Confidence 2357999999 555555555 4589999999999987654
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.72 E-value=3.7e-16 Score=155.27 Aligned_cols=226 Identities=14% Similarity=0.120 Sum_probs=148.3
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.||+++||||||+||++++++|++.| .+|+++.|+..... .+.+.++ ++.. ..++.++
T Consensus 1 ~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~-~~~~~~~---------~~~~---------~~~~~~~ 58 (258)
T 3a28_C 1 MSKVAMVTGGAQGIGRGISEKLAADG---FDIAVADLPQQEEQ-AAETIKL---------IEAA---------DQKAVFV 58 (258)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHT---CEEEEEECGGGHHH-HHHHHHH---------HHTT---------TCCEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCcchHH-HHHHHHH---------HHhc---------CCcEEEE
Confidence 37899999999999999999999999 67888888754310 1111111 1110 2578899
Q ss_pred eccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---cC
Q 008324 91 PGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~ 153 (570)
.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+
T Consensus 59 ~~Dv~~-------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~ 131 (258)
T 3a28_C 59 GLDVTD-------KANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELG 131 (258)
T ss_dssp ECCTTC-------HHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EccCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC
Confidence 999995 333334433 79999999997543 2456778999999999999988753 24
Q ss_pred c-eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 154 L-KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 154 l-~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
. .++|++||....... +....|+
T Consensus 132 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 155 (258)
T 3a28_C 132 VKGKIINAASIAAIQGF--------------------------------------------------------PILSAYS 155 (258)
T ss_dssp CCCEEEEECCGGGTSCC--------------------------------------------------------TTCHHHH
T ss_pred CCcEEEEECcchhccCC--------------------------------------------------------CCchhHH
Confidence 5 799999997543211 1235799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCc---cch--HHHHHHHhcCCceeeecCCCeeeee
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDL---KTI--NTLFVASAQGNLRCLVGETKVIMDV 302 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~---~~~--~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
.||+..|.+.+.+ ..++++.+++|+.|.++.... +.... .+. ........... ....+
T Consensus 156 ~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~ 223 (258)
T 3a28_C 156 TTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQ---IDAELSKINGKPIGENFKEYSSSI---------ALGRP 223 (258)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHH---HHHHHHHHHCCCTTHHHHHHHTTC---------TTSSC
T ss_pred HHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhh---hhhhhccccCCchHHHHHHHHhcC---------CCCCc
Confidence 9999999988765 358999999999987643210 00000 000 01111111110 11236
Q ss_pred eehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
...+|+|++++.++..... .-.++++++.+|
T Consensus 224 ~~p~dvA~~v~~l~s~~~~-~~tG~~i~vdGG 254 (258)
T 3a28_C 224 SVPEDVAGLVSFLASENSN-YVTGQVMLVDGG 254 (258)
T ss_dssp BCHHHHHHHHHHHHSGGGT-TCCSCEEEESSS
T ss_pred cCHHHHHHHHHHHhCcccC-CCCCCEEEECCC
Confidence 7899999999988853322 223788998877
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=2.6e-16 Score=157.99 Aligned_cols=220 Identities=14% Similarity=0.123 Sum_probs=148.5
Q ss_pred cCCCEEEEECCc--chhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 10 LENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaT--GFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||+|+||||+ |+||++++++|++.| .+|+++.|+.......+.+. ++. .++
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G---~~V~~~~r~~~~~~~~~~l~-------------~~~---------~~~ 58 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQG---ATLAFTYLNESLEKRVRPIA-------------QEL---------NSP 58 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTT---CEEEEEESSTTTHHHHHHHH-------------HHT---------TCC
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHH-------------Hhc---------CCc
Confidence 578999999999 999999999999998 67899999864221222221 111 236
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-----------cccHHHHHHHhHHHHHHHHHHHH
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAK 149 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-----------~~~~~~~~~~Nv~gt~~ll~la~ 149 (570)
.++.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++.
T Consensus 59 ~~~~~D~~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 131 (275)
T 2pd4_A 59 YVYELDVSK-------EEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLK 131 (275)
T ss_dssp CEEECCTTC-------HHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred EEEEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 788999995 333334433 68999999997532 13467789999999999999987
Q ss_pred Hc-cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 008324 150 KC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (570)
Q Consensus 150 ~~-~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
.. .+-.++|++||....... +..
T Consensus 132 ~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~ 155 (275)
T 2pd4_A 132 PLLNNGASVLTLSYLGSTKYM--------------------------------------------------------AHY 155 (275)
T ss_dssp GGEEEEEEEEEEECGGGTSBC--------------------------------------------------------TTC
T ss_pred HHhccCCEEEEEecchhcCCC--------------------------------------------------------CCc
Confidence 63 222589999986443210 123
Q ss_pred chHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeee
Q 008324 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.+ ..++++++++|+.|.++.....+. .......+.... + ...+.
T Consensus 156 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~~----p-----~~~~~ 219 (275)
T 2pd4_A 156 NVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIAD-------FRMILKWNEINA----P-----LRKNV 219 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTT-------HHHHHHHHHHHS----T-----TSSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccc-------cHHHHHHHHhcC----C-----cCCCC
Confidence 56999999999988764 348999999999998865432111 111111111110 0 01246
Q ss_pred ehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
..+|+|++++.++..... ...++++++.++
T Consensus 220 ~p~dva~~~~~l~s~~~~-~~tG~~~~vdgg 249 (275)
T 2pd4_A 220 SLEEVGNAGMYLLSSLSS-GVSGEVHFVDAG 249 (275)
T ss_dssp CHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCcccc-CCCCCEEEECCC
Confidence 789999999988853322 223788988876
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.72 E-value=8.3e-17 Score=159.57 Aligned_cols=223 Identities=9% Similarity=0.090 Sum_probs=145.8
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
....++|+||||||+|+||++++++|++.| .+|+++.|..... ..+... + ++. ...+
T Consensus 8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G---~~v~~~~~~~~~~-~~~~~~-~---------~~~---------~~~~ 64 (256)
T 3ezl_A 8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDG---FRVVAGCGPNSPR-RVKWLE-D---------QKA---------LGFD 64 (256)
T ss_dssp -----CEEEEETTTTSHHHHHHHHHHHHTT---EEEEEEECTTCSS-HHHHHH-H---------HHH---------TTCC
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCCHHH-HHHHHH-H---------HHh---------cCCe
Confidence 456789999999999999999999999998 6777777433221 111111 1 111 1257
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc-
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC- 151 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~- 151 (570)
+.++.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 65 ~~~~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 137 (256)
T 3ezl_A 65 FYASEGNVGD-------WDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGM 137 (256)
T ss_dssp CEEEECCTTC-------HHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred eEEEecCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 8899999994 333334443 68999999997642 2456778999999988887776431
Q ss_pred --cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc
Q 008324 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (570)
Q Consensus 152 --~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
.+..++|++||....... ....
T Consensus 138 ~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~ 161 (256)
T 3ezl_A 138 VERGWGRIINISSVNGQKGQ--------------------------------------------------------FGQT 161 (256)
T ss_dssp HHHTCEEEEEECCCCGGGSC--------------------------------------------------------SCCH
T ss_pred HhcCCCEEEEEcchhhccCC--------------------------------------------------------CCCc
Confidence 255789999997543221 1235
Q ss_pred hHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeee
Q 008324 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (570)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.|+.||+..+.+.+.+ ..++++.+++|+.|.++..... ..........+. ....+..
T Consensus 162 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---------~~~~~~~~~~~~---------~~~~~~~ 223 (256)
T 3ezl_A 162 NYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI---------RPDVLEKIVATI---------PVRRLGS 223 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---------CHHHHHHHHHHS---------TTSSCBC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccccc---------CHHHHHHHHhcC---------CCCCCcC
Confidence 7999999888887654 3579999999999977543211 011122221111 1123567
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.+|+|++++.++..... .-.++++++.+|
T Consensus 224 ~~dva~~~~~l~s~~~~-~~tG~~i~vdgG 252 (256)
T 3ezl_A 224 PDEIGSIVAWLASEESG-FSTGADFSLNGG 252 (256)
T ss_dssp HHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHHhCCccc-CCcCcEEEECCC
Confidence 89999999988753322 234789999887
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=2.1e-16 Score=157.94 Aligned_cols=229 Identities=14% Similarity=0.063 Sum_probs=148.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.| .+|+++.|+.... +.+.+ .+.+..+ ..++.+
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~---------~~~~~~~-------~~~~~~ 68 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAEG---AKLSLVDVSSEGL---EASKA---------AVLETAP-------DAEVLT 68 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHH---------HHHHHCT-------TCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHH---------HHHhhcC-------CceEEE
Confidence 789999999999999999999999998 6788888864221 11111 1111111 256889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHH-c--
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKK-C-- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f--------~~~~~~~~~~Nv~gt~~ll~la~~-~-- 151 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++.+.+.. +
T Consensus 69 ~~~D~~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 141 (267)
T 1iy8_A 69 TVADVSD-------EAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMRE 141 (267)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 9999994 433344443 68999999997543 144677899999999887766543 2
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||....... +....|
T Consensus 142 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 165 (267)
T 1iy8_A 142 QGSGMVVNTASVGGIRGI--------------------------------------------------------GNQSGY 165 (267)
T ss_dssp HTCCEEEEECCGGGTSBC--------------------------------------------------------SSBHHH
T ss_pred cCCCEEEEEcchhhccCC--------------------------------------------------------CCCccH
Confidence 256799999997543211 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.. ..++++++++|+.|.++...... ....-.............. ....+...+
T Consensus 166 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~---------p~~r~~~~~ 235 (267)
T 1iy8_A 166 AAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSM-KQLDPENPRKAAEEFIQVN---------PSKRYGEAP 235 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHH-HHHCTTCHHHHHHHHHTTC---------TTCSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccc-cccChhhhhhHHHHHhccC---------CCCCCcCHH
Confidence 99999999888754 35899999999999875321000 0000000000000111111 112367899
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++..... .-.++++++.+|
T Consensus 236 dvA~~v~~l~s~~~~-~~tG~~i~vdGG 262 (267)
T 1iy8_A 236 EIAAVVAFLLSDDAS-YVNATVVPIDGG 262 (267)
T ss_dssp HHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHcCcccc-CCCCCEEEECCC
Confidence 999999988753322 223788999887
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=6.1e-17 Score=161.52 Aligned_cols=225 Identities=15% Similarity=0.119 Sum_probs=140.8
Q ss_pred CCCEEEEECCcchhHHHHHHHHHH-hCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILR-VQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~-~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++|+|+|||||||||++++++|++ .| .+|+++.|+.... +.+. +.++.. ..++.+
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g---~~V~~~~r~~~~~---~~~~---------~~l~~~---------~~~~~~ 58 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFS---GDVVLTARDVTRG---QAAV---------QQLQAE---------GLSPRF 58 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSS---SEEEEEESSHHHH---HHHH---------HHHHHT---------TCCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcC---CeEEEEeCChHHH---HHHH---------HHHHhc---------CCeeEE
Confidence 689999999999999999999999 78 6788998864221 1111 111111 256889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc-cCc
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~l 154 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++.+. .+.
T Consensus 59 ~~~Dl~~-------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 131 (276)
T 1wma_A 59 HQLDIDD-------LQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ 131 (276)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE
T ss_pred EECCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCC
Confidence 9999994 333444444 79999999997532 2456778999999999999999874 223
Q ss_pred eEEEEEecceeecCCCc---ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 155 KVFVHVSTAYVAGERTG---LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g---~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.++|++||..++....+ ...+. +. ..+.+.+.............. -+..+ ..+.+.+.|
T Consensus 132 g~iv~~sS~~~~~~~~~~~~~~~~~-~~-~~~~~e~~~~~~~~~~~~~~~---------------~~~~~-~~~~~~~~Y 193 (276)
T 1wma_A 132 GRVVNVSSIMSVRALKSCSPELQQK-FR-SETITEEELVGLMNKFVEDTK---------------KGVHQ-KEGWPSSAY 193 (276)
T ss_dssp EEEEEECCHHHHHHHHTSCHHHHHH-HH-CSSCCHHHHHHHHHHHHHHHH---------------TTCTT-TTTCCSCHH
T ss_pred CEEEEECChhhhcccccCChhHHhh-cc-ccccchhhhhhhhhhhhhhhc---------------ccccc-cCCCccchh
Confidence 58999999866532100 00000 00 001111111100000000000 00000 001123789
Q ss_pred HHHHHHHHHHHHHh-----c----cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeee
Q 008324 232 VFTKTMGEMLMQQS-----K----ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDV 302 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~----~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
+.||+..|.+++.+ . .++++++++|+.|.++.... ..+
T Consensus 194 ~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~---------------------------------~~~ 240 (276)
T 1wma_A 194 GVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP---------------------------------KAT 240 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT---------------------------------TCS
T ss_pred HHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc---------------------------------ccc
Confidence 99999999888754 2 48999999999987753210 125
Q ss_pred eehHHHHHHHHHHHH
Q 008324 303 IPVDMVVNAMIVAMV 317 (570)
Q Consensus 303 VpVDdva~aii~a~~ 317 (570)
+..+++|++++.++.
T Consensus 241 ~~~~~~a~~~~~l~~ 255 (276)
T 1wma_A 241 KSPEEGAETPVYLAL 255 (276)
T ss_dssp BCHHHHTHHHHHHHS
T ss_pred CChhHhhhhHhhhhc
Confidence 789999999998885
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=5.5e-17 Score=162.07 Aligned_cols=233 Identities=16% Similarity=0.231 Sum_probs=150.8
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.++||+|+||||||+||++++++|++.| .+|+++.|+.... +.+.++ +.+..+ ..++.
T Consensus 4 m~~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~---------l~~~~~-------~~~~~ 61 (267)
T 2gdz_A 4 MVNGKVALVTGAAQGIGRAFAEALLLKG---AKVALVDWNLEAG---VQCKAA---------LHEQFE-------PQKTL 61 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHH---------HTTTSC-------GGGEE
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHH---------HHhhcC-------CCceE
Confidence 3679999999999999999999999998 6788888864221 111111 111100 14688
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHH----Hcc--Cce
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAK----KCV--KLK 155 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~----~~~--~l~ 155 (570)
++.+|+++ .+..+.++ ..+|+|||+||... .+.++..+++|+.|+..+.+.+. +.+ +..
T Consensus 62 ~~~~D~~~-------~~~v~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g 133 (267)
T 2gdz_A 62 FIQCDVAD-------QQQLRDTFRKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGG 133 (267)
T ss_dssp EEECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCE
T ss_pred EEecCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCC-hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 99999994 33333443 35899999999754 46688889999998776655443 321 157
Q ss_pred EEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHH
Q 008324 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (570)
Q Consensus 156 ~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
++|++||...+... +....|+.||
T Consensus 134 ~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK 157 (267)
T 2gdz_A 134 IIINMSSLAGLMPV--------------------------------------------------------AQQPVYCASK 157 (267)
T ss_dssp EEEEECCGGGTSCC--------------------------------------------------------TTCHHHHHHH
T ss_pred EEEEeCCccccCCC--------------------------------------------------------CCCchHHHHH
Confidence 89999998654321 1134699999
Q ss_pred HHHHHHHHHh-------ccCCcEEEEecCceecCCCCCCCc--cccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 236 TMGEMLMQQS-------KENLSLVIIRPTVVSGTYKEPFPG--WVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 236 ~~aE~lv~~~-------~~~lp~~IvRPsiV~g~~~ep~~g--w~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+..|.+.+.+ ..++++++++|+.|.++....... ...........+.. +.....+++++
T Consensus 158 ~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~ 225 (267)
T 2gdz_A 158 HGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKD------------MIKYYGILDPP 225 (267)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHH------------HHHHHCCBCHH
T ss_pred HHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHH------------HhccccCCCHH
Confidence 9999887752 358999999999997753211100 00000000000000 00112367899
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCCCCCcccHHHH
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSI 344 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~~~~pit~~~l 344 (570)
|+|++++.++.+.. -.++++++.++ .++++.|+
T Consensus 226 dvA~~v~~l~s~~~---~~G~~~~v~gg--~~~~~~~~ 258 (267)
T 2gdz_A 226 LIANGLITLIEDDA---LNGAIMKITTS--KGIHFQDY 258 (267)
T ss_dssp HHHHHHHHHHHCTT---CSSCEEEEETT--TEEEECCC
T ss_pred HHHHHHHHHhcCcC---CCCcEEEecCC--CcccccCc
Confidence 99999999886332 23789999988 66666543
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.72 E-value=9e-17 Score=161.14 Aligned_cols=221 Identities=14% Similarity=0.127 Sum_probs=149.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||++++++|++.| .+|+++.|+... .+.+.++ +++ ...++.+
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la~~G---~~V~~~~r~~~~---~~~~~~~---------l~~---------~~~~~~~ 79 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLAVAG---ARILINGTDPSR---VAQTVQE---------FRN---------VGHDAEA 79 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEECCSCHHH---HHHHHHH---------HHH---------TTCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHh---------cCCceEE
Confidence 679999999999999999999999999 678888775422 1111111 111 1257889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 80 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 152 (271)
T 4ibo_A 80 VAFDVTS-------ESEIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPR 152 (271)
T ss_dssp CCCCTTC-------HHHHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 9999995 443444443 69999999997532 2456778999999999998877653 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 153 ~~g~iV~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 176 (271)
T 4ibo_A 153 GYGKIVNIGSLTSELAR--------------------------------------------------------ATVAPYT 176 (271)
T ss_dssp TCEEEEEECCGGGTSBC--------------------------------------------------------TTCHHHH
T ss_pred CCcEEEEEccHHhCCCC--------------------------------------------------------CCchhHH
Confidence 45689999996533211 1235799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.+ ..++++..++|+.|.++..... .+. .........+. ....+..++|
T Consensus 177 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~----~~~~~~~~~~~---------p~~r~~~ped 240 (271)
T 4ibo_A 177 VAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQAL---IDN----PEFDAWVKART---------PAKRWGKPQE 240 (271)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH---HHC----HHHHHHHHHHS---------TTCSCBCGGG
T ss_pred HHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhc---ccC----HHHHHHHHhcC---------CCCCCcCHHH
Confidence 9999999988765 3589999999999988643210 000 11111111111 1123567899
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++.++..... .-.|+++++.+|
T Consensus 241 va~~v~~L~s~~~~-~itG~~i~vdGG 266 (271)
T 4ibo_A 241 LVGTAVFLSASASD-YVNGQIIYVDGG 266 (271)
T ss_dssp GHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCcccc-CCCCcEEEECCC
Confidence 99999988764332 223789999887
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=2.3e-16 Score=157.59 Aligned_cols=221 Identities=10% Similarity=0.044 Sum_probs=146.9
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.-+.+|+|+||||+|+||++++++|++.| .+|+++.+..... .+... +.+.+. ..++
T Consensus 22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G---~~v~i~~~r~~~~--~~~~~---------~~l~~~---------~~~~ 78 (267)
T 4iiu_A 22 SNAMSRSVLVTGASKGIGRAIARQLAADG---FNIGVHYHRDAAG--AQETL---------NAIVAN---------GGNG 78 (267)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCHHH--HHHHH---------HHHHHT---------TCCE
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCchHH--HHHHH---------HHHHhc---------CCce
Confidence 34678999999999999999999999999 5666666543211 11111 111111 2578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH---
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK--- 150 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~--- 150 (570)
.++.+|+++ .+..+.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+..
T Consensus 79 ~~~~~Dl~~-------~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 151 (267)
T 4iiu_A 79 RLLSFDVAN-------REQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMI 151 (267)
T ss_dssp EEEECCTTC-------HHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEEEecCCC-------HHHHHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 899999995 333334433 79999999997642 245677899999999999998742
Q ss_pred -ccCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc
Q 008324 151 -CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (570)
Q Consensus 151 -~~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
..+..++|++||....... ....
T Consensus 152 ~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~ 175 (267)
T 4iiu_A 152 GARQGGRIITLSSVSGVMGN--------------------------------------------------------RGQV 175 (267)
T ss_dssp HHTSCEEEEEECCHHHHHCC--------------------------------------------------------TTCH
T ss_pred hcCCCcEEEEEcchHhccCC--------------------------------------------------------CCCc
Confidence 1356789999997543221 1235
Q ss_pred hHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeee
Q 008324 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (570)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.|+.||+..+.+.+.. ..++++.+++|+.|.++..+.. ........... ....+..
T Consensus 176 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~~---------p~~~~~~ 236 (267)
T 4iiu_A 176 NYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME----------ESALKEAMSMI---------PMKRMGQ 236 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC----------HHHHHHHHHTC---------TTCSCBC
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc----------HHHHHHHHhcC---------CCCCCcC
Confidence 7999999777766543 3489999999999988654321 11122222211 1123568
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++|+|++++.++..... .-.++++++.+|
T Consensus 237 ~edva~~~~~L~s~~~~-~itG~~i~vdGG 265 (267)
T 4iiu_A 237 AEEVAGLASYLMSDIAG-YVTRQVISINGG 265 (267)
T ss_dssp HHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHHhCCccc-CccCCEEEeCCC
Confidence 99999999988864332 223789999876
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.1e-16 Score=159.79 Aligned_cols=222 Identities=15% Similarity=0.188 Sum_probs=146.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||++++++|++.| .+|+++.|..+.....+.+.+++ +.. ..++.+
T Consensus 9 l~~k~vlVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~---------~~~---------~~~~~~ 67 (262)
T 3ksu_A 9 LKNKVIVIAGGIKNLGALTAKTFALES---VNLVLHYHQAKDSDTANKLKDEL---------EDQ---------GAKVAL 67 (262)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHTTSS---CEEEEEESCGGGHHHHHHHHHHH---------HTT---------TCEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEecCccCHHHHHHHHHHH---------Hhc---------CCcEEE
Confidence 579999999999999999999999998 67888888655444444333222 111 257889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc-cCc
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~l 154 (570)
+.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+... ++-
T Consensus 68 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~ 140 (262)
T 3ksu_A 68 YQSDLSN-------EEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPN 140 (262)
T ss_dssp EECCCCS-------HHHHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEE
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC
Confidence 9999994 443444443 69999999997532 2446778899999999999998863 345
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||....... +....|+.|
T Consensus 141 g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 164 (262)
T 3ksu_A 141 GHIITIATSLLAAYT--------------------------------------------------------GFYSTYAGN 164 (262)
T ss_dssp EEEEEECCCHHHHHH--------------------------------------------------------CCCCC----
T ss_pred CEEEEEechhhccCC--------------------------------------------------------CCCchhHHH
Confidence 689999987544321 123469999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHH
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..+.+.+.. ..++++..++|+.|.++...... + ... ............+...+|+|
T Consensus 165 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---~-----~~~---------~~~~~~~~~~~r~~~pedvA 227 (262)
T 3ksu_A 165 KAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQE---T-----KES---------TAFHKSQAMGNQLTKIEDIA 227 (262)
T ss_dssp -CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC-----------------------------CCCCSCCGGGTH
T ss_pred HHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC---c-----hHH---------HHHHHhcCcccCCCCHHHHH
Confidence 99999888765 34799999999998764321100 0 000 00011111223467889999
Q ss_pred HHHHHHHHHhhCCCCCCceEEecCC
Q 008324 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++.++.+ . ..-.|+++++.+|
T Consensus 228 ~~v~~L~s~-~-~~itG~~i~vdGg 250 (262)
T 3ksu_A 228 PIIKFLTTD-G-WWINGQTIFANGG 250 (262)
T ss_dssp HHHHHHHTT-T-TTCCSCEEEESTT
T ss_pred HHHHHHcCC-C-CCccCCEEEECCC
Confidence 999998864 2 2234789999887
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=5.1e-16 Score=151.84 Aligned_cols=211 Identities=17% Similarity=0.190 Sum_probs=143.5
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+|+||||+|+||++++++|++.| .+|+++.|+.... +.+.++ +.+.. ..++.++
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~---------~~~~~--------~~~~~~~ 57 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDG---YALALGARSVDRL---EKIAHE---------LMQEQ--------GVEVFYH 57 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHH---------HHHHH--------CCCEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHH---------HHhhc--------CCeEEEE
Confidence 47899999999999999999999999 6788888864321 111111 11111 3678899
Q ss_pred eccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc--cCc
Q 008324 91 PGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--VKL 154 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~--~~l 154 (570)
.+|+++ .+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... ++-
T Consensus 58 ~~D~~~-------~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~ 130 (235)
T 3l77_A 58 HLDVSK-------AESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTG 130 (235)
T ss_dssp ECCTTC-------HHHHHHHCC-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EeccCC-------HHHHHHHHHHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 999994 444445554 68999999997542 2456778999999999999988652 233
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|.+||....... +....|+.|
T Consensus 131 ~~ii~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~s 154 (235)
T 3l77_A 131 GLALVTTSDVSARLI--------------------------------------------------------PYGGGYVST 154 (235)
T ss_dssp CEEEEECCGGGSSCC--------------------------------------------------------TTCHHHHHH
T ss_pred CcEEEEecchhcccC--------------------------------------------------------CCcchHHHH
Confidence 467777765432110 123579999
Q ss_pred HHHHHHHHHHh---ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHH
Q 008324 235 KTMGEMLMQQS---KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (570)
Q Consensus 235 K~~aE~lv~~~---~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~a 311 (570)
|+..+.+.+.+ ..++++..++|+.|.++.....++. .....++..+++|++
T Consensus 155 Kaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~~--------------------------~~~~~~~~p~dva~~ 208 (235)
T 3l77_A 155 KWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKPGK--------------------------PKEKGYLKPDEIAEA 208 (235)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCSCC--------------------------CGGGTCBCHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccCCc--------------------------ccccCCCCHHHHHHH
Confidence 99999998865 4589999999999977544322110 001145789999999
Q ss_pred HHHHHHHhhCCCCCCceEEecCC
Q 008324 312 MIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++.++...... ..+++.....+
T Consensus 209 v~~l~~~~~~~-~~~~~~~~~~~ 230 (235)
T 3l77_A 209 VRCLLKLPKDV-RVEELMLRSVY 230 (235)
T ss_dssp HHHHHTSCTTC-CCCEEEECCTT
T ss_pred HHHHHcCCCCC-ccceEEEeecc
Confidence 99988633221 12445544443
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=2.1e-16 Score=156.81 Aligned_cols=226 Identities=14% Similarity=0.062 Sum_probs=146.2
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
||+|+||||||+||++++++|++.| .+|+++.|+... .+.+.++ ++.. ..++.++.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~~~ 57 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDG---FAVAIADYNDAT---AKAVASE---------INQA---------GGHAVAVK 57 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHHT---------TCCEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHhc---------CCcEEEEE
Confidence 6899999999999999999999998 678888886422 1111111 1111 24688999
Q ss_pred ccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---cC-
Q 008324 92 GDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK- 153 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~- 153 (570)
+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+
T Consensus 58 ~D~~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~ 130 (256)
T 1geg_A 58 VDVSD-------RDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGH 130 (256)
T ss_dssp CCTTS-------HHHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS
T ss_pred ecCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 99994 443444443 79999999997532 2346778999999999998877652 13
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||....... +....|+.
T Consensus 131 ~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 154 (256)
T 1geg_A 131 GGKIINACSQAGHVGN--------------------------------------------------------PELAVYSS 154 (256)
T ss_dssp CEEEEEECCGGGTSCC--------------------------------------------------------TTBHHHHH
T ss_pred CCEEEEECchhhcCCC--------------------------------------------------------CCchhHHH
Confidence 5789999987543211 11357999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCc-cccCcc-chHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPG-WVEDLK-TINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~g-w~~~~~-~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
||+..|.+.+.. ..++++++++|+.|.++....... +..... ............ .....+...+
T Consensus 155 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~~~p~ 225 (256)
T 1geg_A 155 SKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKR---------ITLGRLSEPE 225 (256)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTT---------CTTCSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhc---------CCCCCCcCHH
Confidence 999999888764 358999999999998753210000 000000 000001111111 0112468899
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++..... .-.++++++.+|
T Consensus 226 dvA~~v~~l~s~~~~-~~tG~~i~vdGG 252 (256)
T 1geg_A 226 DVAACVSYLASPDSD-YMTGQSLLIDGG 252 (256)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESSS
T ss_pred HHHHHHHHHhCcccc-CCCCCEEEeCCC
Confidence 999999988753322 223788988877
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=1.4e-16 Score=156.22 Aligned_cols=201 Identities=11% Similarity=0.101 Sum_probs=141.3
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+||+|+||||||+||++++++|++.| .+|+++.|+.... .....++
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G---~~V~~~~r~~~~~-------------------------------~~~~~~~ 47 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNG---YTVLNIDLSANDQ-------------------------------ADSNILV 47 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTT---EEEEEEESSCCTT-------------------------------SSEEEEC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEecCcccc-------------------------------ccccEEE
Confidence 58999999999999999999999998 7889999976432 1235677
Q ss_pred eccCCCCCCCCCchhhHHHHh---------CCccEEEEcCccCC---c-----cccHHHHHHHhHHHHHHHHHHHHHc-c
Q 008324 91 PGDISSEDLGLKDSNLKEELW---------NELDIMVNSAAITK---F-----DERYDVAFGINTLGVIHLVNFAKKC-V 152 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~---------~~vdiViH~AA~v~---f-----~~~~~~~~~~Nv~gt~~ll~la~~~-~ 152 (570)
.+|++ +.+..+.++ .++|+|||+||... + .+.++..+++|+.|+.++++.+... .
T Consensus 48 ~~D~~-------~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 120 (236)
T 1ooe_A 48 DGNKN-------WTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLK 120 (236)
T ss_dssp CTTSC-------HHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred eCCCC-------CHHHHHHHHHHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 89999 444333433 37999999999643 1 2346777899999999999988763 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|++||...+... +....|+
T Consensus 121 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 144 (236)
T 1ooe_A 121 PGGLLQLTGAAAAMGPT--------------------------------------------------------PSMIGYG 144 (236)
T ss_dssp EEEEEEEECCGGGGSCC--------------------------------------------------------TTBHHHH
T ss_pred cCCEEEEECchhhccCC--------------------------------------------------------CCcHHHH
Confidence 23589999997544211 1235799
Q ss_pred HHHHHHHHHHHHh-------ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 233 FTKTMGEMLMQQS-------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 233 ~sK~~aE~lv~~~-------~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
.||+..+.+.+.+ ..++++++++|+.|.++... ..... ......+|.
T Consensus 145 ~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~-----------------~~~~~---------~~~~~~~~~ 198 (236)
T 1ooe_A 145 MAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNR-----------------KWMPN---------ADHSSWTPL 198 (236)
T ss_dssp HHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHH-----------------HHSTT---------CCGGGCBCH
T ss_pred HHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchh-----------------hcCCC---------ccccccCCH
Confidence 9999999998765 13589999999998774211 00000 011235788
Q ss_pred HHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|+|++++..+.......-.++++++.++
T Consensus 199 ~dvA~~i~~~l~s~~~~~~~G~~~~v~gg 227 (236)
T 1ooe_A 199 SFISEHLLKWTTETSSRPSSGALLKITTE 227 (236)
T ss_dssp HHHHHHHHHHHHCGGGCCCTTCEEEEEEE
T ss_pred HHHHHHHHHHHcCCCcccccccEEEEecC
Confidence 99999998655323222223778887765
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=2.6e-16 Score=158.37 Aligned_cols=220 Identities=15% Similarity=0.165 Sum_probs=151.1
Q ss_pred hcCCCEEEEECCcch--hHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 9 FLENKTILVSGVTGF--VAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 9 ~~~~k~VlITGaTGF--lG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
.++||+|+||||||+ ||++++++|++.| .+|+++.|+. .....+.+ .++ ..+
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G---~~V~~~~r~~-~~~~~~~l-------------~~~---------~~~ 76 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHREG---AELAFTYVGQ-FKDRVEKL-------------CAE---------FNP 76 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHTT---CEEEEEECTT-CHHHHHHH-------------HGG---------GCC
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHcC---CEEEEeeCch-HHHHHHHH-------------HHh---------cCC
Confidence 367899999999988 9999999999998 6788999976 22222221 111 145
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc------------cccHHHHHHHhHHHHHHHHHH
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF------------DERYDVAFGINTLGVIHLVNF 147 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f------------~~~~~~~~~~Nv~gt~~ll~l 147 (570)
+.++.+|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++++.
T Consensus 77 ~~~~~~Dl~~-------~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~ 149 (280)
T 3nrc_A 77 AAVLPCDVIS-------DQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKE 149 (280)
T ss_dssp SEEEECCTTC-------HHHHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred ceEEEeecCC-------HHHHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999995 33333443 358999999997642 234566789999999999998
Q ss_pred HHHc--cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccC
Q 008324 148 AKKC--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLH 225 (570)
Q Consensus 148 a~~~--~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 225 (570)
+... ++-.++|++||.......
T Consensus 150 ~~~~~~~~~g~iv~isS~~~~~~~-------------------------------------------------------- 173 (280)
T 3nrc_A 150 GRSMMKNRNASMVALTYIGAEKAM-------------------------------------------------------- 173 (280)
T ss_dssp HHHHHTTTTCEEEEEECGGGTSCC--------------------------------------------------------
T ss_pred HHHHhhcCCCeEEEEeccccccCC--------------------------------------------------------
Confidence 8763 234689999997543211
Q ss_pred CCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeee
Q 008324 226 GWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIM 300 (570)
Q Consensus 226 ~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~ 300 (570)
.....|+.||+..+.+++.. ..++++.+++|+.|.++.....+. ............ ...
T Consensus 174 ~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~~---------p~~ 237 (280)
T 3nrc_A 174 PSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISN-------FKKMLDYNAMVS---------PLK 237 (280)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTT-------HHHHHHHHHHHS---------TTC
T ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcc-------hHHHHHHHHhcC---------CCC
Confidence 12357999999999988754 357999999999998865432211 111222111111 112
Q ss_pred eeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 301 d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.+..++|+|++++.++..... .-.++++++.+|
T Consensus 238 ~~~~pedvA~~v~~l~s~~~~-~~tG~~i~vdgG 270 (280)
T 3nrc_A 238 KNVDIMEVGNTVAFLCSDMAT-GITGEVVHVDAG 270 (280)
T ss_dssp SCCCHHHHHHHHHHTTSGGGT-TCCSCEEEESTT
T ss_pred CCCCHHHHHHHHHHHhCcccC-CcCCcEEEECCC
Confidence 356789999999988763322 223789999887
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=4.9e-16 Score=155.36 Aligned_cols=224 Identities=14% Similarity=0.087 Sum_probs=149.1
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.-++||+|+||||+|+||++++++|++.| .+|+++.|+.... +.+. +.+.+.. ..++
T Consensus 17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~---------~~l~~~~--------~~~~ 73 (267)
T 1vl8_A 17 FDLRGRVALVTGGSRGLGFGIAQGLAEAG---CSVVVASRNLEEA---SEAA---------QKLTEKY--------GVET 73 (267)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHH---------HHHHHHH--------CCCE
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHH---------HHHHHhc--------CCeE
Confidence 44789999999999999999999999998 6788888864221 1111 1111111 2568
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c-
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C- 151 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~- 151 (570)
.++.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++.. +
T Consensus 74 ~~~~~Dl~~-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~ 146 (267)
T 1vl8_A 74 MAFRCDVSN-------YEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLR 146 (267)
T ss_dssp EEEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred EEEEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 889999995 333334433 79999999997642 134677889999999999988753 2
Q ss_pred -cCceEEEEEeccee-ecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc
Q 008324 152 -VKLKVFVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (570)
Q Consensus 152 -~~l~~~V~vSTa~v-~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
.+..++|++||..+ ... . ....
T Consensus 147 ~~~~g~iv~isS~~~~~~~---------~-----------------------------------------------~~~~ 170 (267)
T 1vl8_A 147 ESDNPSIINIGSLTVEEVT---------M-----------------------------------------------PNIS 170 (267)
T ss_dssp TCSSCEEEEECCGGGTCCC---------S-----------------------------------------------SSCH
T ss_pred HcCCcEEEEECCcchhccC---------C-----------------------------------------------CCCh
Confidence 25679999999752 110 0 1235
Q ss_pred hHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeee
Q 008324 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (570)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.|+.||+..|.+++.. ..++++++++|+.|.++... .+.. . ........... + ...++.
T Consensus 171 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~---~~~~---~-~~~~~~~~~~~----p-----~~~~~~ 234 (267)
T 1vl8_A 171 AYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTE---AVFS---D-PEKLDYMLKRI----P-----LGRTGV 234 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTH---HHHT---C-HHHHHHHHHTC----T-----TSSCBC
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccc---cccc---C-hHHHHHHHhhC----C-----CCCCcC
Confidence 7999999999988765 34899999999999775421 1100 0 11111111111 0 113578
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.+|+|++++.++..... .-.++++.+.+|
T Consensus 235 p~dvA~~v~~l~s~~~~-~itG~~i~vdGG 263 (267)
T 1vl8_A 235 PEDLKGVAVFLASEEAK-YVTGQIIFVDGG 263 (267)
T ss_dssp GGGGHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHHcCcccc-CCcCCeEEECCC
Confidence 89999999988753322 223788888776
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.71 E-value=4.8e-16 Score=156.82 Aligned_cols=228 Identities=13% Similarity=0.062 Sum_probs=149.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.| .+|+++.|+... .+.+.+++ .. ...++.+
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~---~~~~~~~l---------~~---------~~~~~~~ 81 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADG---VTVGALGRTRTE---VEEVADEI---------VG---------AGGQAIA 81 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESSHHH---HHHHHHHH---------TT---------TTCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHHH---------Hh---------cCCcEEE
Confidence 468999999999999999999999999 678888886432 12222111 10 1357889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHHc---
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f--------~~~~~~~~~~Nv~gt~~ll~la~~~--- 151 (570)
+.+|+++ .+..+.++ ..+|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 82 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~ 154 (283)
T 3v8b_A 82 LEADVSD-------ELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQ 154 (283)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEccCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 9999995 33333443 379999999997432 2446778999999999999988421
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||........ . +....|
T Consensus 155 ~~~g~Iv~isS~~~~~~~~-------~-----------------------------------------------~~~~~Y 180 (283)
T 3v8b_A 155 RGGGAIVVVSSINGTRTFT-------T-----------------------------------------------PGATAY 180 (283)
T ss_dssp HTCEEEEEECCSBTTTBCC-------S-----------------------------------------------TTCHHH
T ss_pred cCCceEEEEcChhhccCCC-------C-----------------------------------------------CCchHH
Confidence 2567999999975432100 0 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCee--eeeee
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVI--MDVIP 304 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~--~d~Vp 304 (570)
+.||+..+.+.+.+ ..++++..++||.|.++..+..... ... .. ............. ..+..
T Consensus 181 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~------~~~---~~--~~~~~~~~~~~p~~~~r~~~ 249 (283)
T 3v8b_A 181 TATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLR------HEE---ET--AIPVEWPKGQVPITDGQPGR 249 (283)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBC------CHH---HH--SCCCBCTTCSCGGGTTCCBC
T ss_pred HHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccc------cch---hh--hhhhhhhhhcCccccCCCCC
Confidence 99999999988765 3579999999999988654321100 000 00 0000000111011 23467
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.+|+|++++.++.+... --.|+++++.+|
T Consensus 250 pedvA~~v~fL~s~~a~-~itG~~i~vdGG 278 (283)
T 3v8b_A 250 SEDVAELIRFLVSERAR-HVTGSPVWIDGG 278 (283)
T ss_dssp HHHHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHHcCcccc-CCcCCEEEECcC
Confidence 79999999988764332 223788998876
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=3e-16 Score=157.88 Aligned_cols=230 Identities=12% Similarity=0.129 Sum_probs=149.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||++++++|++.| .+|+++.|+... .+.+.++ +....+ ...++.+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------~~~~~~------~~~~~~~ 62 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEG---ANVTITGRSSER---LEETRQI---------ILKSGV------SEKQVNS 62 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHTTTC------CGGGEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHHcCC------CCcceEE
Confidence 579999999999999999999999998 678888886422 1111111 111100 0026889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-----------cccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-----------~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
+.+|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 63 ~~~Dv~~-------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 135 (280)
T 1xkq_A 63 VVADVTT-------EDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPH 135 (280)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred EEecCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999995 33333443 369999999997532 1346778999999999999988752
Q ss_pred ---cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 008324 152 ---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (570)
Q Consensus 152 ---~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
.+ .++|++||...+.... +..
T Consensus 136 ~~~~~-g~iv~isS~~~~~~~~-------------------------------------------------------~~~ 159 (280)
T 1xkq_A 136 LVASK-GEIVNVSSIVAGPQAQ-------------------------------------------------------PDF 159 (280)
T ss_dssp HHHHT-CEEEEECCGGGSSSCC-------------------------------------------------------CSS
T ss_pred hhcCC-CcEEEecCccccCCCC-------------------------------------------------------Ccc
Confidence 13 7999999975543210 113
Q ss_pred chHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCcc-chHHHHHHHhcCCceeeecCCCeeeee
Q 008324 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLK-TINTLFVASAQGNLRCLVGETKVIMDV 302 (570)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~-~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
..|+.||+..|.+.+.. ..++++++++|+.|.++.......+ +... ............ . ....+
T Consensus 160 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~----~-----p~~~~ 229 (280)
T 1xkq_A 160 LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMP-DQASQKFYNFMASHKEC----I-----PIGAA 229 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCC-HHHHHHHHHHHHHCTTT----C-----TTSSC
T ss_pred cHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccc-cccccchHHHHHHHHcC----C-----CCCCC
Confidence 57999999999988765 3589999999999988643211000 0000 000111111111 0 11246
Q ss_pred eehHHHHHHHHHHHHHh-hCCCCCCceEEecCC
Q 008324 303 IPVDMVVNAMIVAMVAH-AKQPSDANIYHVGSS 334 (570)
Q Consensus 303 VpVDdva~aii~a~~~~-~~~~~~~~iyni~s~ 334 (570)
..++|+|++++.++... ... -.++++++.+|
T Consensus 230 ~~pedvA~~v~~l~s~~~~~~-~tG~~i~vdgG 261 (280)
T 1xkq_A 230 GKPEHIANIILFLADRNLSFY-ILGQSIVADGG 261 (280)
T ss_dssp BCHHHHHHHHHHHHCHHHHTT-CCSCEEEESTT
T ss_pred CCHHHHHHHHHHhcCcccccC-ccCCeEEECCC
Confidence 88999999999887543 222 23789999887
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.71 E-value=1.8e-16 Score=157.05 Aligned_cols=221 Identities=14% Similarity=0.128 Sum_probs=150.1
Q ss_pred CCcccHHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccc
Q 008324 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLN 80 (570)
Q Consensus 1 ~~~~~i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~ 80 (570)
|.+++-...++||+|+||||+|+||++++++|++.| .+|+++.|+.... +.+.+ .+.+..
T Consensus 1 M~~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~---~~~~~---------~~~~~~----- 60 (252)
T 3f1l_A 1 MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYG---ATVILLGRNEEKL---RQVAS---------HINEET----- 60 (252)
T ss_dssp CCCCCCTTTTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHH---------HHHHHH-----
T ss_pred CCcCCcccccCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHH---------HHHhhc-----
Confidence 455555567899999999999999999999999999 6788888864321 11111 111111
Q ss_pred cccCCceEEEeccC--CCCCCCCCchhhHHHHh-------CCccEEEEcCccCC----c----cccHHHHHHHhHHHHHH
Q 008324 81 SFISEKITFVPGDI--SSEDLGLKDSNLKEELW-------NELDIMVNSAAITK----F----DERYDVAFGINTLGVIH 143 (570)
Q Consensus 81 ~~~~~kv~~v~gDl--~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~----f----~~~~~~~~~~Nv~gt~~ 143 (570)
..++.++.+|+ ++ .+..+.++ ..+|++||+||... + .+.++..+++|+.|+.+
T Consensus 61 ---~~~~~~~~~D~~~~~-------~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~ 130 (252)
T 3f1l_A 61 ---GRQPQWFILDLLTCT-------SENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFM 130 (252)
T ss_dssp ---SCCCEEEECCTTTCC-------HHHHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHH
T ss_pred ---CCCceEEEEecccCC-------HHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHH
Confidence 24678899999 63 33333333 36999999999742 2 23467789999999999
Q ss_pred HHHHHHHc---cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhcccc
Q 008324 144 LVNFAKKC---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTE 220 (570)
Q Consensus 144 ll~la~~~---~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 220 (570)
+++.+... .+..++|++||.......
T Consensus 131 ~~~~~~~~m~~~~~g~iv~isS~~~~~~~--------------------------------------------------- 159 (252)
T 3f1l_A 131 LTQALLPLLLKSDAGSLVFTSSSVGRQGR--------------------------------------------------- 159 (252)
T ss_dssp HHHHHHHHHHTSSSCEEEEECCGGGTSCC---------------------------------------------------
T ss_pred HHHHHHHHHHHCCCCEEEEECChhhccCC---------------------------------------------------
Confidence 99988531 255789999997543211
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHh----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCC
Q 008324 221 RAKLHGWPNTYVFTKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGET 296 (570)
Q Consensus 221 ~~~~~~~~n~Y~~sK~~aE~lv~~~----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~ 296 (570)
.....|+.||+..+.+.+.+ ...+.+..+.|+.|.++.. .......
T Consensus 160 -----~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~-----------------~~~~~~~-------- 209 (252)
T 3f1l_A 160 -----ANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMR-----------------ASAFPTE-------- 209 (252)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHH-----------------HHHCTTC--------
T ss_pred -----CCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchh-----------------hhhCCcc--------
Confidence 12357999999999988765 3348899999988865321 0110000
Q ss_pred CeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 297 KVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 297 ~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
....+...+|+|++++.++..... .-.++++++.+|
T Consensus 210 -~~~~~~~p~dva~~~~~L~s~~~~-~itG~~i~vdgG 245 (252)
T 3f1l_A 210 -DPQKLKTPADIMPLYLWLMGDDSR-RKTGMTFDAQPG 245 (252)
T ss_dssp -CGGGSBCTGGGHHHHHHHHSGGGT-TCCSCEEESSCC
T ss_pred -chhccCCHHHHHHHHHHHcCcccc-CCCCCEEEeCCC
Confidence 112356789999999988864332 223789999888
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.5e-16 Score=159.88 Aligned_cols=221 Identities=14% Similarity=0.141 Sum_probs=146.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+... .+.+.+++ . . ..++.+
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~G---~~V~~~~r~~~~---~~~~~~~l---------~----~------~~~~~~ 81 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEAG---ARVFICARDAEA---CADTATRL---------S----A------YGDCQA 81 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECSCHHH---HHHHHHHH---------T----T------SSCEEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHHH---------H----h------cCceEE
Confidence 678999999999999999999999998 678888886422 11111111 0 0 136788
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 82 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 154 (276)
T 2b4q_A 82 IPADLSS-------EAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRS 154 (276)
T ss_dssp CCCCTTS-------HHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeeCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 9999994 333334433 69999999997532 2456788999999998888876531 1
Q ss_pred Cc----eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 008324 153 KL----KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (570)
Q Consensus 153 ~l----~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
+. .++|++||...+.... +..
T Consensus 155 ~~~~~~g~iV~isS~~~~~~~~-------------------------------------------------------~~~ 179 (276)
T 2b4q_A 155 ASAENPARVINIGSVAGISAMG-------------------------------------------------------EQA 179 (276)
T ss_dssp CCSSSCEEEEEECCGGGTCCCC-------------------------------------------------------CSC
T ss_pred cCCCCCCEEEEECCHHHcCCCC-------------------------------------------------------CCc
Confidence 33 7999999976543211 111
Q ss_pred chHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeee
Q 008324 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..|.+.+.+ ..++++++++|+.|.++.... +... ....+.... .. + ...+.
T Consensus 180 ~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~---~~~~---~~~~~~~~~-~~----p-----~~r~~ 243 (276)
T 2b4q_A 180 YAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRH---IAND---PQALEADSA-SI----P-----MGRWG 243 (276)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHH---HHHC---HHHHHHHHH-TS----T-----TSSCC
T ss_pred cccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhh---cchh---HHHHHHhhc-CC----C-----CCCcC
Confidence 27999999999988765 348999999999998764311 1000 000011000 10 0 12367
Q ss_pred ehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
..+|+|++++.++..... .-.++++++.+|
T Consensus 244 ~p~dvA~~v~~l~s~~~~-~~tG~~i~vdGG 273 (276)
T 2b4q_A 244 RPEEMAALAISLAGTAGA-YMTGNVIPIDGG 273 (276)
T ss_dssp CHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCcccc-CCCCCEEEeCCC
Confidence 899999999998864322 223788988876
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.71 E-value=8.6e-16 Score=154.31 Aligned_cols=237 Identities=12% Similarity=0.097 Sum_probs=151.8
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcc-------cHHHHHHHHHhhhhhHHHHHhhhcccc
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID-------SAALRFQNEVLAKDVFNVLKEKWGTRL 79 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~-------~~~~rl~~~l~~~~~f~~l~~~~~~~~ 79 (570)
..-++||+++||||+|+||++++++|++.| .+|+++.|..+.. ...+++++ . .+.+..
T Consensus 6 ~~~l~~k~~lVTGas~GIG~a~a~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~------ 70 (277)
T 3tsc_A 6 AGKLEGRVAFITGAARGQGRAHAVRMAAEG---ADIIAVDIAGKLPSCVPYDPASPDDLSE-T-----VRLVEA------ 70 (277)
T ss_dssp -CTTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEECCSCCCTTCCSCCCCHHHHHH-H-----HHHHHH------
T ss_pred ccccCCCEEEEECCccHHHHHHHHHHHHcC---CEEEEEeccccccccccccccCHHHHHH-H-----HHHHHh------
Confidence 335789999999999999999999999999 6788888853210 01122221 1 011111
Q ss_pred ccccCCceEEEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHH
Q 008324 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLV 145 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll 145 (570)
...++.++.+|+++ .+..+.++ ..+|++||+||.... .+.++..+++|+.|+.+++
T Consensus 71 ---~~~~~~~~~~D~~~-------~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~ 140 (277)
T 3tsc_A 71 ---ANRRIVAAVVDTRD-------FDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTV 140 (277)
T ss_dssp ---TTCCEEEEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred ---cCCeEEEEECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHH
Confidence 13678899999995 33333443 369999999997643 2456778999999999999
Q ss_pred HHHHHc----cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccc
Q 008324 146 NFAKKC----VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTER 221 (570)
Q Consensus 146 ~la~~~----~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 221 (570)
+.+... +.-.++|++||.......
T Consensus 141 ~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------------------------------------- 168 (277)
T 3tsc_A 141 MAGAPRIIEGGRGGSIILISSAAGMKMQ---------------------------------------------------- 168 (277)
T ss_dssp HHHHHHHHHHTSCEEEEEECCGGGTSCC----------------------------------------------------
T ss_pred HHHHHHHHhcCCCCEEEEEccHhhCCCC----------------------------------------------------
Confidence 886542 124689999997643221
Q ss_pred cccCCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcC-CceeeecC
Q 008324 222 AKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQG-NLRCLVGE 295 (570)
Q Consensus 222 ~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G-~~~~~~~~ 295 (570)
+....|+.||+..+.+.+.. ..++++..++|+.|.++.... ............. ........
T Consensus 169 ----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 236 (277)
T 3tsc_A 169 ----PFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSG--------DMVTAVGQAMETNPQLSHVLTP 236 (277)
T ss_dssp ----SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSH--------HHHHHHHHHHHTCGGGTTTTCC
T ss_pred ----CCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccc--------hhhhhhhhcccccHHHHHHhhh
Confidence 12357999999999988765 347999999999998764321 0000011110000 00000111
Q ss_pred CCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 296 TKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 296 ~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
... ..+...+|+|++++.++.+...- -.++++++.+|
T Consensus 237 ~~p-~r~~~pedvA~~v~~L~s~~~~~-itG~~i~vdGG 273 (277)
T 3tsc_A 237 FLP-DWVAEPEDIADTVCWLASDESRK-VTAAQIPVDQG 273 (277)
T ss_dssp SSS-CSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTT
T ss_pred ccC-CCCCCHHHHHHHHHHHhCccccC-CcCCEEeeCCC
Confidence 111 13788999999999988643322 23789999877
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=5.6e-16 Score=152.88 Aligned_cols=213 Identities=14% Similarity=0.097 Sum_probs=145.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||||+||++++++|++.| .+|+++.|+... .+.+. ++ -.+.+
T Consensus 3 l~~k~vlVTGas~giG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~----------~~~~~ 53 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGRATLELFAKEG---ARLVACDIEEGP---LREAA-------------EA----------VGAHP 53 (245)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HT----------TTCEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------HH----------cCCEE
Confidence 468999999999999999999999998 678888886421 11111 00 12678
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 54 ~~~D~~~-------~~~~~~~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~ 126 (245)
T 1uls_A 54 VVMDVAD-------PASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK 126 (245)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 8999995 33333433 358999999997542 2446778999999999999888653 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....+. .....|+
T Consensus 127 ~~g~iv~isS~~~~~~---------------------------------------------------------~~~~~Y~ 149 (245)
T 1uls_A 127 NPGSIVLTASRVYLGN---------------------------------------------------------LGQANYA 149 (245)
T ss_dssp CCEEEEEECCGGGGCC---------------------------------------------------------TTCHHHH
T ss_pred CCCEEEEEccchhcCC---------------------------------------------------------CCchhHH
Confidence 4679999999762221 1125699
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.. ..++++++++|+.|.++.....+ ........... +. ..++..+|
T Consensus 150 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~~----p~-----~~~~~~~d 211 (245)
T 1uls_A 150 ASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVP---------EKVREKAIAAT----PL-----GRAGKPLE 211 (245)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSC---------HHHHHHHHHTC----TT-----CSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcC---------HHHHHHHHhhC----CC-----CCCcCHHH
Confidence 9999888887654 35899999999999876432111 11111111111 10 12578999
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++.++..... .-.++++++.++
T Consensus 212 vA~~v~~l~s~~~~-~~tG~~~~vdgG 237 (245)
T 1uls_A 212 VAYAALFLLSDESS-FITGQVLFVDGG 237 (245)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCchhc-CCcCCEEEECCC
Confidence 99999988863322 223788988876
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.4e-16 Score=160.34 Aligned_cols=231 Identities=14% Similarity=0.096 Sum_probs=148.8
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
....+||++|||||+|+||++++++|++.| .+|+++.|+.... +.+.++ ++.. ..+
T Consensus 19 ~~m~~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~---~~~~~~---------l~~~---------~~~ 74 (279)
T 3sju_A 19 SHMSRPQTAFVTGVSSGIGLAVARTLAARG---IAVYGCARDAKNV---SAAVDG---------LRAA---------GHD 74 (279)
T ss_dssp ------CEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHH---------HHTT---------TCC
T ss_pred ccccCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHH---------HHhc---------CCc
Confidence 345678999999999999999999999999 6788888864321 111111 1111 257
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH--
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-- 150 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-- 150 (570)
+.++.+|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++++.+..
T Consensus 75 ~~~~~~Dv~d-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 147 (279)
T 3sju_A 75 VDGSSCDVTS-------TDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAG 147 (279)
T ss_dssp EEEEECCTTC-------HHHHHHHHHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHS
T ss_pred EEEEECCCCC-------HHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchh
Confidence 8899999995 33333433 368999999997642 244677889999999999998865
Q ss_pred -c--cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCC
Q 008324 151 -C--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (570)
Q Consensus 151 -~--~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 227 (570)
+ .+..++|++||....... ..
T Consensus 148 ~~~~~~~g~iV~isS~~~~~~~--------------------------------------------------------~~ 171 (279)
T 3sju_A 148 GMREAGWGRIVNIASTGGKQGV--------------------------------------------------------MY 171 (279)
T ss_dssp SHHHHTCEEEEEECCGGGTSCC--------------------------------------------------------TT
T ss_pred hHhhcCCcEEEEECChhhccCC--------------------------------------------------------CC
Confidence 2 245789999997543211 12
Q ss_pred CchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCC-ccccCcc-chHHHHHHHhcCCceeeecCCCeee
Q 008324 228 PNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFP-GWVEDLK-TINTLFVASAQGNLRCLVGETKVIM 300 (570)
Q Consensus 228 ~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~-gw~~~~~-~~~~~i~~~~~G~~~~~~~~~~~~~ 300 (570)
...|+.||+..+.+.+.. ..++++.+++|+.|.++..+... .+..... ........+..+. ...
T Consensus 172 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~ 242 (279)
T 3sju_A 172 AAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKI---------PLG 242 (279)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTC---------TTS
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcC---------CCC
Confidence 357999999888887754 35799999999999875432100 0000000 1112222222221 123
Q ss_pred eeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 301 d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.+..++|+|++++.++.+...- -.++++++.+|
T Consensus 243 r~~~pedvA~~v~~L~s~~a~~-itG~~i~vdGG 275 (279)
T 3sju_A 243 RYSTPEEVAGLVGYLVTDAAAS-ITAQALNVCGG 275 (279)
T ss_dssp SCBCHHHHHHHHHHHTSSGGGG-CCSCEEEESTT
T ss_pred CCCCHHHHHHHHHHHhCccccC-cCCcEEEECCC
Confidence 4578999999999887533221 23789999887
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.2e-16 Score=157.84 Aligned_cols=218 Identities=15% Similarity=0.143 Sum_probs=147.8
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
-++||+++||||+|+||++++++|++.| .+|+++.|+.... +.+.+ +. ..++.
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G---~~V~~~~r~~~~~---~~~~~-------------~~--------~~~~~ 55 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADG---ATVIVSDINAEGA---KAAAA-------------SI--------GKKAR 55 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECSCHHHH---HHHHH-------------HH--------CTTEE
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHH-------------Hh--------CCceE
Confidence 4689999999999999999999999999 6788888764221 11111 11 25788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH----
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK---- 150 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~---- 150 (570)
++.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+..
T Consensus 56 ~~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 128 (247)
T 3rwb_A 56 AIAADISD-------PGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRA 128 (247)
T ss_dssp ECCCCTTC-------HHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEEcCCCC-------HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 99999995 333344443 79999999997643 245677899999999999887543
Q ss_pred ccCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 151 CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 151 ~~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+...++|++||....... +....
T Consensus 129 ~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 152 (247)
T 3rwb_A 129 AGKAGRVISIASNTFFAGT--------------------------------------------------------PNMAA 152 (247)
T ss_dssp HTCCEEEEEECCTHHHHTC--------------------------------------------------------TTCHH
T ss_pred cCCCcEEEEECchhhccCC--------------------------------------------------------CCchh
Confidence 2225789999997543321 12357
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..+.+.+.. ..++++..++|+.|.++.....+. . ....+. .... ....+...
T Consensus 153 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~---~--~~~~~~-~~~~-----------~~~r~~~p 215 (247)
T 3rwb_A 153 YVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPH---N--EAFGFV-EMLQ-----------AMKGKGQP 215 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGG---G--GGHHHH-HHHS-----------SSCSCBCH
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccCh---h--HHHHHH-hccc-----------ccCCCcCH
Confidence 999999888887754 358999999999998754322111 0 011111 1101 01124578
Q ss_pred HHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|+|+++..++..... --.++++++.+|
T Consensus 216 edva~~v~~L~s~~~~-~itG~~i~vdGG 243 (247)
T 3rwb_A 216 EHIADVVSFLASDDAR-WITGQTLNVDAG 243 (247)
T ss_dssp HHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHhCcccc-CCCCCEEEECCC
Confidence 9999999988864332 223789999877
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=8.2e-17 Score=163.62 Aligned_cols=230 Identities=14% Similarity=0.163 Sum_probs=149.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.| .+|+++.|+.... +.+.++ +++..+. ..++.+
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G---~~V~~~~r~~~~~---~~~~~~---------l~~~~~~------~~~~~~ 82 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEG---AQVTITGRNEDRL---EETKQQ---------ILKAGVP------AEKINA 82 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHH---------HHHTTCC------GGGEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHH---------HHhcCCC------CceEEE
Confidence 679999999999999999999999998 6788888864221 111111 1111000 027889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCC-----c----cccHHHHHHHhHHHHHHHHHHHHHc--
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITK-----F----DERYDVAFGINTLGVIHLVNFAKKC-- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~-----f----~~~~~~~~~~Nv~gt~~ll~la~~~-- 151 (570)
+.+|+++ .+..+.+++ ++|+|||+||... + .+.++..+++|+.|+.++++++...
T Consensus 83 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 155 (297)
T 1xhl_A 83 VVADVTE-------ASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLI 155 (297)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EecCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHH
Confidence 9999995 333334433 7999999999653 2 1346778999999999999988753
Q ss_pred -cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+ .++|++||........ +....
T Consensus 156 ~~~-g~IV~isS~~~~~~~~-------------------------------------------------------~~~~~ 179 (297)
T 1xhl_A 156 KTK-GEIVNVSSIVAGPQAH-------------------------------------------------------SGYPY 179 (297)
T ss_dssp HTT-CEEEEECCGGGSSSCC-------------------------------------------------------TTSHH
T ss_pred hcC-CEEEEEcCchhccCCC-------------------------------------------------------CCcch
Confidence 23 6999999975543210 11357
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCcc-chHHHHHHHhcCCceeeecCCCeeeeeee
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLK-TINTLFVASAQGNLRCLVGETKVIMDVIP 304 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~-~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
|+.||+..+.+.+.. ..++++++++|+.|.++....... .+... ............ . ....+..
T Consensus 180 Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~----~-----p~~r~~~ 249 (297)
T 1xhl_A 180 YACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGL-PETASDKLYSFIGSRKEC----I-----PVGHCGK 249 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTC-CHHHHHHHHHHHHHCTTT----C-----TTSSCBC
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCcccccccc-ccccccchHHHHHHHHhc----C-----CCCCCcC
Confidence 999999999988764 358999999999998864311100 00000 000111111111 1 1124688
Q ss_pred hHHHHHHHHHHHHHh-hCCCCCCceEEecCC
Q 008324 305 VDMVVNAMIVAMVAH-AKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~-~~~~~~~~iyni~s~ 334 (570)
.+|+|++++.++... ..- -.++++++.+|
T Consensus 250 pedvA~~v~~l~s~~~~~~-itG~~i~vdGG 279 (297)
T 1xhl_A 250 PEEIANIIVFLADRNLSSY-IIGQSIVADGG 279 (297)
T ss_dssp HHHHHHHHHHHHCHHHHTT-CCSCEEEESTT
T ss_pred HHHHHHHHHHHhCCcccCC-ccCcEEEECCC
Confidence 999999999888543 222 23789999887
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.71 E-value=3.3e-16 Score=155.91 Aligned_cols=221 Identities=14% Similarity=0.124 Sum_probs=144.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||++++++|++.| .+|+++.|..... .+...+++ ++ ...++.+
T Consensus 6 l~~k~vlVTGas~GIG~aia~~la~~G---~~V~~~~~~~~~~--~~~~~~~~---------~~---------~~~~~~~ 62 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRACAIRFAQEG---ANVVLTYNGAAEG--AATAVAEI---------EK---------LGRSALA 62 (259)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECSSCHH--HHHHHHHH---------HT---------TTSCCEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCCHHH--HHHHHHHH---------Hh---------cCCceEE
Confidence 679999999999999999999999999 6777775544321 11111111 11 1257889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHHc-cC
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKKC-VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~----f----~~~~~~~~~~Nv~gt~~ll~la~~~-~~ 153 (570)
+.+|+++ .+..+.+++ ++|++||+||... + .+.++..+++|+.|+.++++++... ..
T Consensus 63 ~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~ 135 (259)
T 3edm_A 63 IKADLTN-------AAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK 135 (259)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999995 343344443 7999999998651 1 2346778999999999999998763 22
Q ss_pred ceEEEEEecceee-cCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 154 LKVFVHVSTAYVA-GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 154 l~~~V~vSTa~v~-~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
-.++|++||.... ... .....|+
T Consensus 136 ~g~iv~isS~~~~~~~~--------------------------------------------------------~~~~~Y~ 159 (259)
T 3edm_A 136 GGAIVTFSSQAGRDGGG--------------------------------------------------------PGALAYA 159 (259)
T ss_dssp EEEEEEECCHHHHHCCS--------------------------------------------------------TTCHHHH
T ss_pred CCEEEEEcCHHhccCCC--------------------------------------------------------CCcHHHH
Confidence 3489999997654 111 1235799
Q ss_pred HHHHHHHHHHHHh----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHH
Q 008324 233 FTKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (570)
Q Consensus 233 ~sK~~aE~lv~~~----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
.||+..+.+.+.. ..++.+..+.|+.|.++....... .... ...........+..++|+
T Consensus 160 asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~--------~~~~---------~~~~~~~p~~r~~~pedv 222 (259)
T 3edm_A 160 TSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTK--------PEVR---------ERVAGATSLKREGSSEDV 222 (259)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC---------------------------------------CCBCHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccC--------hHHH---------HHHHhcCCCCCCcCHHHH
Confidence 9999999988754 345999999999998764422110 0000 001111123346689999
Q ss_pred HHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|++++.++..... .-.|+++++.++
T Consensus 223 a~~v~~L~s~~~~-~itG~~i~vdGg 247 (259)
T 3edm_A 223 AGLVAFLASDDAA-YVTGACYDINGG 247 (259)
T ss_dssp HHHHHHHHSGGGT-TCCSCEEEESBC
T ss_pred HHHHHHHcCcccc-CccCCEEEECCC
Confidence 9999988864332 223789999887
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.9e-16 Score=158.41 Aligned_cols=223 Identities=10% Similarity=0.077 Sum_probs=146.7
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
..+++|+++||||+|+||++++++|++.| .+|+++.|..... .+...++ ++. ...++
T Consensus 21 ~~~~~k~vlITGas~gIG~~~a~~l~~~G---~~v~~~~~~~~~~--~~~~~~~---------~~~---------~~~~~ 77 (269)
T 3gk3_A 21 SMQAKRVAFVTGGMGGLGAAISRRLHDAG---MAVAVSHSERNDH--VSTWLMH---------ERD---------AGRDF 77 (269)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHTTT---CEEEEEECSCHHH--HHHHHHH---------HHT---------TTCCC
T ss_pred hhhcCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCchHH--HHHHHHH---------HHh---------cCCce
Confidence 34778999999999999999999999998 5677777543221 1111101 110 13578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc--
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-- 151 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~-- 151 (570)
.++.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 78 ~~~~~Dl~~-------~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~ 150 (269)
T 3gk3_A 78 KAYAVDVAD-------FESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMV 150 (269)
T ss_dssp EEEECCTTC-------HHHHHHHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEEEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 999999995 33333433 379999999997632 2446778999999999999887542
Q ss_pred -cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+..++|++||....... .....
T Consensus 151 ~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 174 (269)
T 3gk3_A 151 ERRFGRIVNIGSVNGSRGA--------------------------------------------------------FGQAN 174 (269)
T ss_dssp HHTCEEEEEECCHHHHHCC--------------------------------------------------------TTBHH
T ss_pred hcCCCEEEEeCChhhccCC--------------------------------------------------------CCcch
Confidence 255789999997543211 12357
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..+.+.+.. ..++++.+++|+.|.++..+..+... . .. ..........+..+
T Consensus 175 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~---------~----~~----~~~~~~~~~~~~~p 237 (269)
T 3gk3_A 175 YASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDV---------L----EA----KILPQIPVGRLGRP 237 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC--------------------C----CSGGGCTTSSCBCH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhH---------H----HH----HhhhcCCcCCccCH
Confidence 999999888887654 34899999999999886543221100 0 00 00001112345679
Q ss_pred HHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|+|++++.++.... ..-.++++++.+|
T Consensus 238 ~dvA~~v~~L~s~~~-~~itG~~i~vdgG 265 (269)
T 3gk3_A 238 DEVAALIAFLCSDDA-GFVTGADLAINGG 265 (269)
T ss_dssp HHHHHHHHHHTSTTC-TTCCSCEEEESTT
T ss_pred HHHHHHHHHHhCCCc-CCeeCcEEEECCC
Confidence 999999998875322 2234789999887
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.1e-16 Score=156.90 Aligned_cols=209 Identities=13% Similarity=0.149 Sum_probs=143.2
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.+.+|+|+||||||+||++++++|++.| .+|+++.|+.... +++.
T Consensus 18 ~l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~--------------------------------~~~~ 62 (253)
T 2nm0_A 18 SHMSRSVLVTGGNRGIGLAIARAFADAG---DKVAITYRSGEPP--------------------------------EGFL 62 (253)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSSCCC--------------------------------TTSE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCChHhh--------------------------------ccce
Confidence 4678999999999999999999999998 6788888865321 3367
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~--- 151 (570)
++.+|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 63 ~~~~Dl~d-------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~ 135 (253)
T 2nm0_A 63 AVKCDITD-------TEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLR 135 (253)
T ss_dssp EEECCTTS-------HHHHHHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 89999995 33333443 357999999997532 2457888999999999999877642
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||........ ....|
T Consensus 136 ~~~g~iv~isS~~~~~~~~--------------------------------------------------------~~~~Y 159 (253)
T 2nm0_A 136 AKKGRVVLISSVVGLLGSA--------------------------------------------------------GQANY 159 (253)
T ss_dssp HTCEEEEEECCCCCCCCHH--------------------------------------------------------HHHHH
T ss_pred cCCCEEEEECchhhCCCCC--------------------------------------------------------CcHHH
Confidence 2567999999975432100 02469
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.. ..++++.+++|+.|.++.....+ +. ......... ....++..+
T Consensus 160 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---~~------~~~~~~~~~---------p~~~~~~p~ 221 (253)
T 2nm0_A 160 AASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLT---DE------QRANIVSQV---------PLGRYARPE 221 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC------------------CHHHHHTTC---------TTCSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcC---HH------HHHHHHhcC---------CCCCCcCHH
Confidence 99999999888754 35799999999998765432110 00 001111110 112367899
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++..... .-.++++.+.++
T Consensus 222 dvA~~i~~l~s~~~~-~~tG~~i~vdGG 248 (253)
T 2nm0_A 222 EIAATVRFLASDDAS-YITGAVIPVDGG 248 (253)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhCcccc-CCcCcEEEECCc
Confidence 999999988864322 223788988876
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.1e-16 Score=156.96 Aligned_cols=212 Identities=10% Similarity=0.131 Sum_probs=144.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||||+||++++++|++.| .+|+++.|... ...++ ...++.+
T Consensus 7 l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~------~~~~~---------------------~~~~~~~ 56 (257)
T 3tl3_A 7 IRDAVAVVTGGASGLGLATTKRLLDAG---AQVVVLDIRGE------DVVAD---------------------LGDRARF 56 (257)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHHT---CEEEEEESSCH------HHHHH---------------------TCTTEEE
T ss_pred ecCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCchH------HHHHh---------------------cCCceEE
Confidence 679999999999999999999999999 67888888431 11101 1367889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC------CccEEEEcCccCC-----------ccccHHHHHHHhHHHHHHHHHHHHHc-
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN------ELDIMVNSAAITK-----------FDERYDVAFGINTLGVIHLVNFAKKC- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~------~vdiViH~AA~v~-----------f~~~~~~~~~~Nv~gt~~ll~la~~~- 151 (570)
+.+|+++ .+..+.+++ .+|++||+||... ..+.++..+++|+.|+.++++++...
T Consensus 57 ~~~D~~~-------~~~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 129 (257)
T 3tl3_A 57 AAADVTD-------EAAVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERI 129 (257)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCC-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 9999995 333334443 7999999999742 12456788999999999999988753
Q ss_pred ----------cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccc
Q 008324 152 ----------VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTER 221 (570)
Q Consensus 152 ----------~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 221 (570)
.+-.++|++||...+....
T Consensus 130 ~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------------------- 158 (257)
T 3tl3_A 130 AKTEPVGPNAEERGVIINTASVAAFDGQI--------------------------------------------------- 158 (257)
T ss_dssp TTSCCC--CCCCSEEEEEECCCC--CCHH---------------------------------------------------
T ss_pred HHhcccccccCCCcEEEEEcchhhcCCCC---------------------------------------------------
Confidence 1235799999976543211
Q ss_pred cccCCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCC
Q 008324 222 AKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGET 296 (570)
Q Consensus 222 ~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~ 296 (570)
....|+.||+..+.+.+.. ..++.+..++|+.|.++.....+ ............ .
T Consensus 159 -----~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---------~~~~~~~~~~~~----~-- 218 (257)
T 3tl3_A 159 -----GQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLP---------EEARASLGKQVP----H-- 218 (257)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---C---------HHHHHHHHHTSS----S--
T ss_pred -----CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhcc---------HHHHHHHHhcCC----C--
Confidence 1246999999888887654 35799999999999876542211 111111211111 0
Q ss_pred CeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 297 KVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 297 ~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
...+...+|+|++++.++.. ..-.++++++.+|
T Consensus 219 --~~r~~~p~dva~~v~~l~s~---~~itG~~i~vdGG 251 (257)
T 3tl3_A 219 --PSRLGNPDEYGALAVHIIEN---PMLNGEVIRLDGA 251 (257)
T ss_dssp --SCSCBCHHHHHHHHHHHHHC---TTCCSCEEEESTT
T ss_pred --CCCccCHHHHHHHHHHHhcC---CCCCCCEEEECCC
Confidence 02467899999999998863 2224789999887
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=5.9e-16 Score=157.20 Aligned_cols=221 Identities=13% Similarity=0.094 Sum_probs=151.8
Q ss_pred hcCCCEEEEECCcc--hhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 9 FLENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 9 ~~~~k~VlITGaTG--FlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
-++||+|+||||+| +||++++++|++.| .+|+++.|+.+.....+.+. ++ ..+
T Consensus 27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~G---~~V~~~~r~~~~~~~~~~~~-------------~~---------~~~ 81 (296)
T 3k31_A 27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQG---AEVALTYLSETFKKRVDPLA-------------ES---------LGV 81 (296)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHHTT---CEEEEEESSGGGHHHHHHHH-------------HH---------HTC
T ss_pred ccCCCEEEEEeCCCCCCHHHHHHHHHHHCC---CEEEEEeCChHHHHHHHHHH-------------Hh---------cCC
Confidence 36799999999998 99999999999999 67889999754322222111 11 134
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-----------cccHHHHHHHhHHHHHHHHHHH
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFA 148 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-----------~~~~~~~~~~Nv~gt~~ll~la 148 (570)
+.++.+|+++ .+..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+
T Consensus 82 ~~~~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 154 (296)
T 3k31_A 82 KLTVPCDVSD-------AESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKA 154 (296)
T ss_dssp CEEEECCTTC-------HHHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred eEEEEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 6789999995 44334444 368999999997532 2456778999999999999998
Q ss_pred HHc-cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCC
Q 008324 149 KKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (570)
Q Consensus 149 ~~~-~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 227 (570)
... ..-.++|++||....... ..
T Consensus 155 ~~~m~~~g~IV~isS~~~~~~~--------------------------------------------------------~~ 178 (296)
T 3k31_A 155 EPLMTNGGSILTLSYYGAEKVV--------------------------------------------------------PH 178 (296)
T ss_dssp GGGCTTCEEEEEEECGGGTSCC--------------------------------------------------------TT
T ss_pred HHHhhcCCEEEEEEehhhccCC--------------------------------------------------------CC
Confidence 763 334589999987543211 12
Q ss_pred CchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeee
Q 008324 228 PNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDV 302 (570)
Q Consensus 228 ~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
...|+.||+..+.+.+.+ ..++++..++|+.|.++.....+ .............. ...+
T Consensus 179 ~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~~p---------~~r~ 242 (296)
T 3k31_A 179 YNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGIS-------DFHYILTWNKYNSP---------LRRN 242 (296)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCH-------HHHHHHHHHHHHST---------TSSC
T ss_pred chhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhccc-------chHHHHHHHHhcCC---------CCCC
Confidence 357999999999988765 34799999999999886543211 11111111111110 1124
Q ss_pred eehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
...+|+|++++.++..... .-.++++++.+|
T Consensus 243 ~~pedvA~~v~fL~s~~a~-~itG~~i~vdGG 273 (296)
T 3k31_A 243 TTLDDVGGAALYLLSDLGR-GTTGETVHVDCG 273 (296)
T ss_dssp CCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred CCHHHHHHHHHHHcCCccC-CccCCEEEECCC
Confidence 5689999999998864332 223789999887
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.3e-16 Score=154.10 Aligned_cols=188 Identities=16% Similarity=0.121 Sum_probs=126.3
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+|+|+||||||+||++++++|++.| .+|+++.|+... .+.+. ++ ..++.++
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~---------~~~~~~~ 55 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKG---YRVGLMARDEKR---LQALA-------------AE---------LEGALPL 55 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HH---------STTCEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHH-------------HH---------hhhceEE
Confidence 36899999999999999999999998 678888886421 11111 11 1367889
Q ss_pred eccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--cC
Q 008324 91 PGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--VK 153 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~ 153 (570)
.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+.. + .+
T Consensus 56 ~~D~~~-------~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~ 128 (234)
T 2ehd_A 56 PGDVRE-------EGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG 128 (234)
T ss_dssp ECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT
T ss_pred EecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC
Confidence 999995 33333333 378999999997532 234677899999999877665532 1 25
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||...+... .....|+.
T Consensus 129 ~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~ 152 (234)
T 2ehd_A 129 GGTIVNVGSLAGKNPF--------------------------------------------------------KGGAAYNA 152 (234)
T ss_dssp CEEEEEECCTTTTSCC--------------------------------------------------------TTCHHHHH
T ss_pred CcEEEEECCchhcCCC--------------------------------------------------------CCCchhhH
Confidence 7899999997543211 12357999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHH
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..|.+.+.+ ..+++++++||+.|.++..... . . . ...+..+|+
T Consensus 153 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~--------------~---~--------~~~~~~~dv 203 (234)
T 2ehd_A 153 SKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT----P--------------G---Q--------AWKLKPEDV 203 (234)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEECC---------------------------------------------CCHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc----c--------------c---c--------cCCCCHHHH
Confidence 999888877654 3589999999999876432100 0 0 0 014689999
Q ss_pred HHHHHHHHHH
Q 008324 309 VNAMIVAMVA 318 (570)
Q Consensus 309 a~aii~a~~~ 318 (570)
|++++.++..
T Consensus 204 A~~~~~l~~~ 213 (234)
T 2ehd_A 204 AQAVLFALEM 213 (234)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHhCC
Confidence 9999998863
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.4e-16 Score=162.10 Aligned_cols=213 Identities=14% Similarity=0.065 Sum_probs=137.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+.... +.+.++ ++.. ..++.+
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~~---------l~~~---------~~~~~~ 84 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRG---ARLVLSDVDQPAL---EQAVNG---------LRGQ---------GFDAHG 84 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHH---------HHHT---------TCCEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHH---------HHhc---------CCceEE
Confidence 689999999999999999999999999 6788888865321 111111 1111 257889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc-c--
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-V-- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~-~-- 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 85 ~~~Dv~d-------~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 157 (301)
T 3tjr_A 85 VVCDVRH-------LDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQ 157 (301)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEccCCC-------HHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Confidence 9999995 343344443 79999999997532 2446778999999999999987542 1
Q ss_pred C-ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 153 K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 153 ~-l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+ ..++|++||....... +....|
T Consensus 158 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 181 (301)
T 3tjr_A 158 GTGGHIAFTASFAGLVPN--------------------------------------------------------AGLGTY 181 (301)
T ss_dssp CSCEEEEEECCGGGTSCC--------------------------------------------------------TTBHHH
T ss_pred CCCcEEEEeCchhhcCCC--------------------------------------------------------CCchHH
Confidence 2 4689999997644211 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.+ ..++++++++|+.|.++....... ........ ........+......++++++
T Consensus 182 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-------~~~~~~~~-~~~~~~~~~~~~~~~~~~~pe 253 (301)
T 3tjr_A 182 GVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSER-------IRGADYGM-SATPEGAFGPLPTQDESVSAD 253 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHH-------HC-----------------------CCCHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccccccccc-------ccchhhcc-ccChhhhccccccccCCCCHH
Confidence 99999888887654 347999999999987753210000 00000000 000011112222345689999
Q ss_pred HHHHHHHHHHH
Q 008324 307 MVVNAMIVAMV 317 (570)
Q Consensus 307 dva~aii~a~~ 317 (570)
+||++++.++.
T Consensus 254 dvA~~i~~~l~ 264 (301)
T 3tjr_A 254 DVARLTADAIL 264 (301)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999999886
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.71 E-value=4.8e-16 Score=155.32 Aligned_cols=222 Identities=18% Similarity=0.138 Sum_probs=150.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.| .+|+++.|+.... +...++ +.+.. ..++.+
T Consensus 18 l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~---~~~~~~---------l~~~~--------~~~~~~ 74 (266)
T 4egf_A 18 LDGKRALITGATKGIGADIARAFAAAG---ARLVLSGRDVSEL---DAARRA---------LGEQF--------GTDVHT 74 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHH---------HHHHH--------CCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHH---------HHHhc--------CCcEEE
Confidence 679999999999999999999999999 6788888864321 111111 11111 367899
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc-c--
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-V-- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~-~-- 152 (570)
+.+|+++++ ..+.++ ..+|++||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 75 ~~~Dv~~~~-------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 147 (266)
T 4egf_A 75 VAIDLAEPD-------APAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAA 147 (266)
T ss_dssp EECCTTSTT-------HHHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCHH-------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 999999643 222333 379999999997642 2446778999999999999988642 1
Q ss_pred -CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 153 -KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 153 -~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.-.++|++||...+... .....|
T Consensus 148 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 171 (266)
T 4egf_A 148 GEGGAIITVASAAALAPL--------------------------------------------------------PDHYAY 171 (266)
T ss_dssp TSCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred CCCeEEEEEcchhhccCC--------------------------------------------------------CCChHH
Confidence 24589999997644211 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.+ ..++++..++|+.|.++..... | ............. ....+...+
T Consensus 172 ~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~-----~~~~~~~~~~~~~---------p~~r~~~p~ 235 (266)
T 4egf_A 172 CTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRV--W-----GDEAKSAPMIARI---------PLGRFAVPH 235 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHH--T-----CSHHHHHHHHTTC---------TTSSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhh--c-----cChHHHHHHHhcC---------CCCCCcCHH
Confidence 99999999888755 3579999999999987543110 0 0011111222211 112356799
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++.+... .-.++++++.+|
T Consensus 236 dva~~v~~L~s~~~~-~itG~~i~vdGG 262 (266)
T 4egf_A 236 EVSDAVVWLASDAAS-MINGVDIPVDGG 262 (266)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhCchhc-CccCcEEEECCC
Confidence 999999988864332 223789999887
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.70 E-value=9.8e-16 Score=157.12 Aligned_cols=237 Identities=13% Similarity=0.120 Sum_probs=151.7
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCccc------HHHHHHHHHhhhhhHHHHHhhhccccccc
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS------AALRFQNEVLAKDVFNVLKEKWGTRLNSF 82 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~------~~~rl~~~l~~~~~f~~l~~~~~~~~~~~ 82 (570)
-++||+|+||||+|+||++++++|++.| .+|+++.|+..... ..+++.+ . .+.+.+
T Consensus 43 ~l~gk~~lVTGas~GIG~aia~~la~~G---~~Vv~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~--------- 104 (317)
T 3oec_A 43 RLQGKVAFITGAARGQGRTHAVRLAQDG---ADIVAIDLCRQQPNLDYAQGSPEELKE-T-----VRLVEE--------- 104 (317)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEECCCCCTTCCSCCCCHHHHHH-H-----HHHHHH---------
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCC---CeEEEEecccccccccccccCHHHHHH-H-----HHHHHh---------
Confidence 3689999999999999999999999999 67888887643210 1222221 1 011111
Q ss_pred cCCceEEEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHH
Q 008324 83 ISEKITFVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFA 148 (570)
Q Consensus 83 ~~~kv~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la 148 (570)
...++.++.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+.++++++
T Consensus 105 ~~~~~~~~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 177 (317)
T 3oec_A 105 QGRRIIARQADVRD-------LASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAV 177 (317)
T ss_dssp TTCCEEEEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred cCCeEEEEECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 13578899999995 333334443 79999999997642 2456778999999999999988
Q ss_pred HHc----cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhcccccccc
Q 008324 149 KKC----VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKL 224 (570)
Q Consensus 149 ~~~----~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 224 (570)
... +.-.++|++||...+...
T Consensus 178 ~~~m~~~~~~g~Iv~isS~~~~~~~------------------------------------------------------- 202 (317)
T 3oec_A 178 LPSMIERGQGGSVIFVSSTVGLRGA------------------------------------------------------- 202 (317)
T ss_dssp HHHHHHTCSCEEEEEECCGGGSSCC-------------------------------------------------------
T ss_pred HHHHHHcCCCCEEEEECcHHhcCCC-------------------------------------------------------
Confidence 542 124679999997543211
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCC---ccccCccc-hHHHHHHHhcCCceeeecC
Q 008324 225 HGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFP---GWVEDLKT-INTLFVASAQGNLRCLVGE 295 (570)
Q Consensus 225 ~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~---gw~~~~~~-~~~~i~~~~~G~~~~~~~~ 295 (570)
+....|+.||+..+.+.+.+ ..++++..++|+.|.++...... .+...... ...-....... .
T Consensus 203 -~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------ 274 (317)
T 3oec_A 203 -PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQ-L------ 274 (317)
T ss_dssp -TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTT-T------
T ss_pred -CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhh-h------
Confidence 12357999999999988765 34899999999999875321000 00000000 00000000000 0
Q ss_pred CCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 296 TKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 296 ~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
......++.++|+|++++.++.+... .-.|+++++.+|
T Consensus 275 ~~~p~~~~~pedvA~av~fL~s~~a~-~itG~~i~vdGG 312 (317)
T 3oec_A 275 TLLPIPWVEPEDVSNAVAWLASDEAR-YIHGAAIPVDGG 312 (317)
T ss_dssp CSSSSSSBCHHHHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred ccCCCCCCCHHHHHHHHHHHcCCccc-CCCCCEEEECcc
Confidence 01114578999999999988754332 223789999887
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=1.3e-16 Score=159.91 Aligned_cols=193 Identities=14% Similarity=0.129 Sum_probs=136.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|++.| .+|+++.|+... .+.+.++ +++. ..++.+
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G---~~V~~~~r~~~~---~~~~~~~---------l~~~---------~~~~~~ 84 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLK---SKLVLWDINKHG---LEETAAK---------CKGL---------GAKVHT 84 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHHT---------TCCEEE
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEEcCHHH---HHHHHHH---------HHhc---------CCeEEE
Confidence 678999999999999999999999998 678889886422 1111111 1111 257889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 85 ~~~Dl~~-------~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 157 (272)
T 1yb1_A 85 FVVDCSN-------REDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN 157 (272)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EEeeCCC-------HHHHHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 9999995 33333443 379999999997643 1345677999999988888776542 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+.... ....|+
T Consensus 158 ~~~~iv~isS~~~~~~~~--------------------------------------------------------~~~~Y~ 181 (272)
T 1yb1_A 158 NHGHIVTVASAAGHVSVP--------------------------------------------------------FLLAYC 181 (272)
T ss_dssp TCEEEEEECCCC-CCCHH--------------------------------------------------------HHHHHH
T ss_pred CCCEEEEEechhhcCCCC--------------------------------------------------------CchhHH
Confidence 568999999986543210 124699
Q ss_pred HHHHHHHHHHHHh--------ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeee
Q 008324 233 FTKTMGEMLMQQS--------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (570)
Q Consensus 233 ~sK~~aE~lv~~~--------~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.||+..|.+++.+ ..+++++++||+.|.++... .. . .....+++
T Consensus 182 ~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~------~~---~-------------------~~~~~~~~ 233 (272)
T 1yb1_A 182 SSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK------NP---S-------------------TSLGPTLE 233 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT------CT---H-------------------HHHCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccc------cc---c-------------------ccccCCCC
Confidence 9999999988754 13799999999999876421 00 0 00124678
Q ss_pred hHHHHHHHHHHHH
Q 008324 305 VDMVVNAMIVAMV 317 (570)
Q Consensus 305 VDdva~aii~a~~ 317 (570)
++|+|++++.++.
T Consensus 234 ~~dva~~i~~~~~ 246 (272)
T 1yb1_A 234 PEEVVNRLMHGIL 246 (272)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998885
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.9e-16 Score=154.76 Aligned_cols=217 Identities=11% Similarity=0.111 Sum_probs=147.0
Q ss_pred CCCEEEEECCcchhHHHHHHHHHH-hCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILR-VQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~-~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++|+|+||||+|+||++++++|++ .+ ..|++..|.+... .+++.+
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g---~~v~~~~~~~~~~-------------------------------~~~~~~ 48 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKN---HTVINIDIQQSFS-------------------------------AENLKF 48 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTT---EEEEEEESSCCCC-------------------------------CTTEEE
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCC---cEEEEeccccccc-------------------------------cccceE
Confidence 688999999999999999999998 56 6777777765421 256789
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-----CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc-cCceE
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-----ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKLKV 156 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-----~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~l~~ 156 (570)
+.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+... ..-.+
T Consensus 49 ~~~Dv~~-------~~~v~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~ 121 (244)
T 4e4y_A 49 IKADLTK-------QQDITNVLDIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGAS 121 (244)
T ss_dssp EECCTTC-------HHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEE
T ss_pred EecCcCC-------HHHHHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcE
Confidence 9999995 443444444 68999999997532 2456778999999999999988763 22247
Q ss_pred EEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHH
Q 008324 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (570)
Q Consensus 157 ~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+|++||...+... +....|+.||+
T Consensus 122 iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~asKa 145 (244)
T 4e4y_A 122 IVFNGSDQCFIAK--------------------------------------------------------PNSFAYTLSKG 145 (244)
T ss_dssp EEEECCGGGTCCC--------------------------------------------------------TTBHHHHHHHH
T ss_pred EEEECCHHHccCC--------------------------------------------------------CCCchhHHHHH
Confidence 9999987544221 12357999999
Q ss_pred HHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCc-cccCc-cchHHHHHHHhcCCceeeecCCCeeeeeeehHHHH
Q 008324 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPG-WVEDL-KTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (570)
Q Consensus 237 ~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~g-w~~~~-~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
..+.+.+.. ..++++.+++|+.|.++....... +.... ............. .....+..++|+|
T Consensus 146 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~~~p~dvA 216 (244)
T 4e4y_A 146 AIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKE---------FPLNRIAQPQEIA 216 (244)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTT---------STTSSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhc---------CCCCCCcCHHHHH
Confidence 999998765 348999999999998753211000 00000 0000011111111 1123467899999
Q ss_pred HHHHHHHHHhhCCCCCCceEEecCC
Q 008324 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++.++..... .-.++++++.+|
T Consensus 217 ~~v~~l~s~~~~-~itG~~i~vdGG 240 (244)
T 4e4y_A 217 ELVIFLLSDKSK-FMTGGLIPIDGG 240 (244)
T ss_dssp HHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHhcCccc-cccCCeEeECCC
Confidence 999998864332 223789999877
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=2.8e-15 Score=151.22 Aligned_cols=238 Identities=15% Similarity=0.106 Sum_probs=153.6
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCccc----------HHHHHHHHHhhhhhHHHHHhhhc
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS----------AALRFQNEVLAKDVFNVLKEKWG 76 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~----------~~~rl~~~l~~~~~f~~l~~~~~ 76 (570)
..-++||+++||||+|+||++++++|++.| .+|+++.|++.... ..+++++ + .+.++.
T Consensus 6 ~~~l~~k~~lVTGas~gIG~aia~~la~~G---~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~--- 73 (286)
T 3uve_A 6 TGRVEGKVAFVTGAARGQGRSHAVRLAQEG---ADIIAVDICKPIRAGVVDTAIPASTPEDLAE-T-----ADLVKG--- 73 (286)
T ss_dssp CCTTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEECCSCSBTTBCCCSSCCCCHHHHHH-H-----HHHHHT---
T ss_pred CcccCCCEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeccccccccccccccccCCHHHHHH-H-----HHHHhh---
Confidence 345789999999999999999999999999 67888888742110 1122221 1 011111
Q ss_pred cccccccCCceEEEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc--------cccHHHHHHHhHHHH
Q 008324 77 TRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF--------DERYDVAFGINTLGV 141 (570)
Q Consensus 77 ~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f--------~~~~~~~~~~Nv~gt 141 (570)
...++.++.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+
T Consensus 74 ------~~~~~~~~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~ 140 (286)
T 3uve_A 74 ------HNRRIVTAEVDVRD-------YDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGV 140 (286)
T ss_dssp ------TTCCEEEEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHH
T ss_pred ------cCCceEEEEcCCCC-------HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHH
Confidence 13578999999995 443444433 79999999997532 244677899999999
Q ss_pred HHHHHHHHHc----cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhc
Q 008324 142 IHLVNFAKKC----VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNL 217 (570)
Q Consensus 142 ~~ll~la~~~----~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (570)
.++++++... +.-.++|++||.......
T Consensus 141 ~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------------------------------------------ 172 (286)
T 3uve_A 141 WKTVKAGVPHMIAGGRGGSIILTSSVGGLKAY------------------------------------------------ 172 (286)
T ss_dssp HHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC------------------------------------------------
T ss_pred HHHHHHHHHHHHhCCCCcEEEEECchhhccCC------------------------------------------------
Confidence 9999987652 124589999997543211
Q ss_pred cccccccCCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCc---cccCc--cchHHHHHHHhcC
Q 008324 218 GTERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPG---WVEDL--KTINTLFVASAQG 287 (570)
Q Consensus 218 g~~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~g---w~~~~--~~~~~~i~~~~~G 287 (570)
+....|+.||+..+.+.+.+ ..++++..++|+.|.++....... +.... ..+... .....
T Consensus 173 --------~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~- 242 (286)
T 3uve_A 173 --------PHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDM-APICQ- 242 (286)
T ss_dssp --------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHH-HHHHH-
T ss_pred --------CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhH-HHHHH-
Confidence 12357999999999888754 357999999999998875432100 00000 001000 00000
Q ss_pred CceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 288 NLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 288 ~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
...... ..+...+|+|++++.++.+... --.|+++++.+|
T Consensus 243 -----~~~~~p-~r~~~p~dvA~~v~fL~s~~a~-~itG~~i~vdGG 282 (286)
T 3uve_A 243 -----MFHTLP-IPWVEPIDISNAVLFFASDEAR-YITGVTLPIDAG 282 (286)
T ss_dssp -----TTCSSS-CSCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred -----hhhccC-CCcCCHHHHHHHHHHHcCcccc-CCcCCEEeECCc
Confidence 000111 3567899999999998864332 223789999887
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.70 E-value=6.8e-16 Score=154.40 Aligned_cols=221 Identities=13% Similarity=0.098 Sum_probs=143.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.+||+++||||+|+||++++++|++.| .+|++..+..... .+.+.+++ +. ...++.+
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G---~~Vv~~~~~~~~~--~~~~~~~~---------~~---------~~~~~~~ 81 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDG---FTVVINYAGKAAA--AEEVAGKI---------EA---------AGGKALT 81 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHT---CEEEEEESSCSHH--HHHHHHHH---------HH---------TTCCEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEcCCCHHH--HHHHHHHH---------Hh---------cCCeEEE
Confidence 568999999999999999999999999 5677765543321 22222111 11 1357889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-ccCc
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-CVKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~~~l 154 (570)
+.+|+++ .+..+.++ ..+|++||+||.... .+.++..+++|+.|+.++++.+.. +..-
T Consensus 82 ~~~Dl~~-------~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~ 154 (267)
T 3u5t_A 82 AQADVSD-------PAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVG 154 (267)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999995 33333443 379999999997642 234677889999999999988765 3333
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||....... +....|+.|
T Consensus 155 g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 178 (267)
T 3u5t_A 155 GRIINMSTSQVGLLH--------------------------------------------------------PSYGIYAAA 178 (267)
T ss_dssp EEEEEECCTHHHHCC--------------------------------------------------------TTCHHHHHH
T ss_pred CeEEEEeChhhccCC--------------------------------------------------------CCchHHHHH
Confidence 589999987543221 123579999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHH
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..+.+.+.. ..++++..++|+.|.++..... ..+ ......... .....+..++|+|
T Consensus 179 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~------~~~~~~~~~---------~p~~r~~~pedvA 241 (267)
T 3u5t_A 179 KAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEG--KSD------EVRDRFAKL---------APLERLGTPQDIA 241 (267)
T ss_dssp HHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-------------------CHHHHHTS---------STTCSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCcccccc--CCH------HHHHHHHhc---------CCCCCCcCHHHHH
Confidence 99999998765 3479999999999977543110 000 001111111 1123457789999
Q ss_pred HHHHHHHHHhhCCCCCCceEEecCC
Q 008324 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++.++.... ..-.++++++.+|
T Consensus 242 ~~v~~L~s~~~-~~itG~~i~vdGG 265 (267)
T 3u5t_A 242 GAVAFLAGPDG-AWVNGQVLRANGG 265 (267)
T ss_dssp HHHHHHHSTTT-TTCCSEEEEESSS
T ss_pred HHHHHHhCccc-cCccCCEEEeCCC
Confidence 99998875322 2223788988776
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=4.8e-16 Score=156.24 Aligned_cols=225 Identities=12% Similarity=0.104 Sum_probs=151.5
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
..++||+++||||+|+||++++++|++.| .+|+++.|+.... +...++ +.... ..++
T Consensus 23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~---~~~~~~---------~~~~~--------~~~~ 79 (277)
T 4fc7_A 23 DLLRDKVAFITGGGSGIGFRIAEIFMRHG---CHTVIASRSLPRV---LTAARK---------LAGAT--------GRRC 79 (277)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHTTT---CEEEEEESCHHHH---HHHHHH---------HHHHH--------SSCE
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHH---------HHHhc--------CCcE
Confidence 34789999999999999999999999998 6788888864321 111111 11111 3578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c-
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C- 151 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~- 151 (570)
.++.+|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++++.+.. +
T Consensus 80 ~~~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 152 (277)
T 4fc7_A 80 LPLSMDVRA-------PPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFF 152 (277)
T ss_dssp EEEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTH
T ss_pred EEEEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 899999995 33333443 379999999996432 245677899999999999998753 1
Q ss_pred -cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+..++|++||....... .....
T Consensus 153 ~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 176 (277)
T 4fc7_A 153 RDHGGVIVNITATLGNRGQ--------------------------------------------------------ALQVH 176 (277)
T ss_dssp HHHCEEEEEECCSHHHHTC--------------------------------------------------------TTCHH
T ss_pred HcCCCEEEEECchhhCCCC--------------------------------------------------------CCcHH
Confidence 245689999997544221 12357
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..+.+.+.. ..++++..++|+.|.++... ................. ....+...
T Consensus 177 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~------~~~~~~~~~~~~~~~~~---------p~~r~~~p 241 (277)
T 4fc7_A 177 AGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGL------RRLGGPQASLSTKVTAS---------PLQRLGNK 241 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHH------HHHSCCHHHHHHHHHTS---------TTSSCBCH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhh------hhccCCHHHHHHHhccC---------CCCCCcCH
Confidence 999999999988765 34799999999999875210 00011111122222111 11235678
Q ss_pred HHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|+|++++.++..... .-.++++++.+|
T Consensus 242 ~dvA~~v~fL~s~~~~-~itG~~i~vdGG 269 (277)
T 4fc7_A 242 TEIAHSVLYLASPLAS-YVTGAVLVADGG 269 (277)
T ss_dssp HHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHcCCccC-CcCCCEEEECCC
Confidence 9999999998864332 223789999887
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.7e-15 Score=151.44 Aligned_cols=235 Identities=15% Similarity=0.133 Sum_probs=153.0
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcc------cHHHHHHHHHhhhhhHHHHHhhhcccccc
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID------SAALRFQNEVLAKDVFNVLKEKWGTRLNS 81 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~------~~~~rl~~~l~~~~~f~~l~~~~~~~~~~ 81 (570)
.-++||+++||||+|+||++++++|++.| .+|+++.|++... ...+++.+ . .+.+..
T Consensus 24 ~~l~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~-------- 86 (299)
T 3t7c_A 24 GKVEGKVAFITGAARGQGRSHAITLAREG---ADIIAIDVCKQLDGVKLPMSTPDDLAE-T-----VRQVEA-------- 86 (299)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEECCSCCTTCCSCCCCHHHHHH-H-----HHHHHH--------
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEecccccccccccccCHHHHHH-H-----HHHHHh--------
Confidence 45789999999999999999999999999 6788888874211 00122221 0 011111
Q ss_pred ccCCceEEEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHH
Q 008324 82 FISEKITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVN 146 (570)
Q Consensus 82 ~~~~kv~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f--------~~~~~~~~~~Nv~gt~~ll~ 146 (570)
...++.++.+|+++ .+..+.++ ..+|++||+||.... .+.++..+++|+.|+.++++
T Consensus 87 -~~~~~~~~~~Dv~~-------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~ 158 (299)
T 3t7c_A 87 -LGRRIIASQVDVRD-------FDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITAR 158 (299)
T ss_dssp -TTCCEEEEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred -cCCceEEEECCCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHH
Confidence 13678999999995 33333443 379999999997532 24467789999999999999
Q ss_pred HHHHc----cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhcccccc
Q 008324 147 FAKKC----VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERA 222 (570)
Q Consensus 147 la~~~----~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 222 (570)
++... ++..++|++||.......
T Consensus 159 ~~~~~~~~~~~~g~Iv~isS~~~~~~~----------------------------------------------------- 185 (299)
T 3t7c_A 159 VAIPHIMAGKRGGSIVFTSSIGGLRGA----------------------------------------------------- 185 (299)
T ss_dssp HHHHHHHHTTSCEEEEEECCGGGTSCC-----------------------------------------------------
T ss_pred HHHHHHHhcCCCcEEEEECChhhccCC-----------------------------------------------------
Confidence 87642 235689999997543211
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCcc---ccCc--cchHHHH--HHHhcCCce
Q 008324 223 KLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGW---VEDL--KTINTLF--VASAQGNLR 290 (570)
Q Consensus 223 ~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw---~~~~--~~~~~~i--~~~~~G~~~ 290 (570)
+....|+.||+..+.+.+.. ..++++..++|+.|.++.....+.+ .... ....... ......
T Consensus 186 ---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 259 (299)
T 3t7c_A 186 ---ENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHV--- 259 (299)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSS---
T ss_pred ---CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcc---
Confidence 12357999999999888754 3489999999999988754321100 0000 0000000 001110
Q ss_pred eeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 291 CLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 291 ~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.+ ..+...+|+|++++.++.+... --.|+++++.+|
T Consensus 260 -~p------~r~~~pedvA~~v~fL~s~~a~-~itG~~i~vdGG 295 (299)
T 3t7c_A 260 -LP------IPYVEPADISNAILFLVSDDAR-YITGVSLPVDGG 295 (299)
T ss_dssp -SS------CSCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred -cC------cCCCCHHHHHHHHHHHhCcccc-cCcCCEEeeCCC
Confidence 11 2467899999999998864332 223789999887
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=5.9e-17 Score=161.73 Aligned_cols=215 Identities=14% Similarity=0.133 Sum_probs=147.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||||+||++++++|++.| .+|+++.|+... .+.+. ++ ...++.+
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~~~G---~~V~~~~r~~~~---~~~~~-------------~~--------~~~~~~~ 56 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFAREG---ASLVAVDREERL---LAEAV-------------AA--------LEAEAIA 56 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HT--------CCSSEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHH-------------HH--------hcCceEE
Confidence 578999999999999999999999998 678888886421 11111 11 1246889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc-cCc
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~l 154 (570)
+.+|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++++++... ++.
T Consensus 57 ~~~D~~~-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 129 (263)
T 2a4k_A 57 VVADVSD-------PKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG 129 (263)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC
Confidence 9999995 33333443 358999999997542 2346677899999999999998763 224
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||...++ .. ....|+.|
T Consensus 130 g~iv~isS~~~~~-~~--------------------------------------------------------~~~~Y~as 152 (263)
T 2a4k_A 130 GSLVLTGSVAGLG-AF--------------------------------------------------------GLAHYAAG 152 (263)
T ss_dssp CEEEEECCCTTCC-HH--------------------------------------------------------HHHHHHHC
T ss_pred CEEEEEecchhcC-CC--------------------------------------------------------CcHHHHHH
Confidence 5899999986541 10 12469999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHH
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..+.+.+.. ..++++++++|+.|.++.....+ ........... + ...+...+|+|
T Consensus 153 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~~----p-----~~~~~~p~dvA 214 (263)
T 2a4k_A 153 KLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLP---------PWAWEQEVGAS----P-----LGRAGRPEEVA 214 (263)
T ss_dssp SSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSC---------HHHHHHHHHTS----T-----TCSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcC---------HHHHHHHHhcC----C-----CCCCcCHHHHH
Confidence 99877777654 35899999999999886542211 11111111111 0 12357899999
Q ss_pred HHHHHHHHHhhCCCCCCceEEecCC
Q 008324 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++.++..... .-.++++++.++
T Consensus 215 ~~v~~l~s~~~~-~~tG~~i~vdgG 238 (263)
T 2a4k_A 215 QAALFLLSEESA-YITGQALYVDGG 238 (263)
T ss_dssp HHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHhCcccc-CCcCCEEEECCC
Confidence 999988863322 223789999887
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.7e-16 Score=157.25 Aligned_cols=234 Identities=9% Similarity=0.026 Sum_probs=141.4
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+||||||+||++++++|++.| .+|+++.|+..... . .+.+
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G---~~V~~~~r~~~~~~-------------------------------~---~~~~ 44 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAG---HQIVGIDIRDAEVI-------------------------------A---DLST 44 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSSSSEE-------------------------------C---CTTS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCchhhc-------------------------------c---cccc
Confidence 689999999999999999999998 67889998754321 1 1467
Q ss_pred cCCCCCCCCCchhhHHHHhC----CccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHc---cCceEEEEEeccee
Q 008324 93 DISSEDLGLKDSNLKEELWN----ELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHVSTAYV 165 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~----~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~---~~l~~~V~vSTa~v 165 (570)
|++ +.+..+.+++ ++|+|||+||.....++++..+++|+.|+.++++++... .+..++|++||...
T Consensus 45 Dl~-------~~~~v~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~ 117 (257)
T 1fjh_A 45 AEG-------RKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVAS 117 (257)
T ss_dssp HHH-------HHHHHHHHHTTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred CCC-------CHHHHHHHHHHhCCCCCEEEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhh
Confidence 777 4554556654 469999999987645668999999999999999988642 24579999999876
Q ss_pred ecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008324 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (570)
Q Consensus 166 ~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (570)
+...... + +.+... . ..+.+......... ........|+.||+..|.+++..
T Consensus 118 ~~~~~~~----------~-~~~~~~--~----------~~~~~~~~~~~~~~-----~~~~~~~~Y~~sK~a~~~~~~~l 169 (257)
T 1fjh_A 118 AHLAFDK----------N-PLALAL--E----------AGEEAKARAIVEHA-----GEQGGNLAYAGSKNALTVAVRKR 169 (257)
T ss_dssp GSSCGGG----------C-TTHHHH--H----------HTCHHHHHHHHHTC-----CTTHHHHHHHHHHHHHHHHHHHT
T ss_pred hcccccc----------c-hhhhhh--c----------ccchhhhhhhhhcc-----cCCCCccHHHHHHHHHHHHHHHH
Confidence 6321100 0 000000 0 00001110000000 00012358999999999998765
Q ss_pred -----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhh
Q 008324 246 -----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHA 320 (570)
Q Consensus 246 -----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~ 320 (570)
..++++++++|+.|.++..... ... ........ .+ .. ....+++++|+|++++.++....
T Consensus 170 a~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~-----~~~~~~~~----~~-~~--~~~~~~~~~dvA~~~~~l~~~~~ 234 (257)
T 1fjh_A 170 AAAWGEAGVRLNTIAPGATETPLLQAG---LQD-----PRYGESIA----KF-VP--PMGRRAEPSEMASVIAFLMSPAA 234 (257)
T ss_dssp HHHHHHTTCEEEEEEECC---------------------------------C-CC--STTSCCCTHHHHHHHHHHTSGGG
T ss_pred HHHHhhcCeEEEEEeeCCCCCccchhh---ccc-----hhHHHHHH----hc-cc--ccCCCCCHHHHHHHHHHHhCchh
Confidence 3589999999999988653211 000 00000000 00 00 11236789999999998885332
Q ss_pred CCCCCCceEEecCC
Q 008324 321 KQPSDANIYHVGSS 334 (570)
Q Consensus 321 ~~~~~~~iyni~s~ 334 (570)
. .-.++++++.++
T Consensus 235 ~-~~tG~~~~vdgG 247 (257)
T 1fjh_A 235 S-YVHGAQIVIDGG 247 (257)
T ss_dssp T-TCCSCEEEESTT
T ss_pred c-CCcCCEEEECCC
Confidence 2 223788988876
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=3.1e-16 Score=157.05 Aligned_cols=220 Identities=13% Similarity=0.089 Sum_probs=147.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.| .+|+++.|+... .+.+.+ + ..++.+
T Consensus 7 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~-------------~---------~~~~~~ 58 (270)
T 1yde_A 7 YAGKVVVVTGGGRGIGAGIVRAFVNSG---ARVVICDKDESG---GRALEQ-------------E---------LPGAVF 58 (270)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHH-------------H---------CTTEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHH-------------H---------hcCCeE
Confidence 689999999999999999999999998 678888886422 111111 1 134788
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHHc--c
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f--------~~~~~~~~~~Nv~gt~~ll~la~~~--~ 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... +
T Consensus 59 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 131 (270)
T 1yde_A 59 ILCDVTQ-------EDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRK 131 (270)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 9999994 443344443 78999999997532 1346778999999999999988642 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... +....|+
T Consensus 132 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 155 (270)
T 1yde_A 132 SQGNVINISSLVGAIGQ--------------------------------------------------------AQAVPYV 155 (270)
T ss_dssp HTCEEEEECCHHHHHCC--------------------------------------------------------TTCHHHH
T ss_pred CCCEEEEEcCccccCCC--------------------------------------------------------CCCcccH
Confidence 34789999997543211 1135699
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..|.+.+.+ ..++++.++||+.|+++..+... .........+....... + ...+...+|
T Consensus 156 asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~----p-----~~r~~~p~d 223 (270)
T 1yde_A 156 ATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELA---ALMPDPRASIREGMLAQ----P-----LGRMGQPAE 223 (270)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHH---TTSSSHHHHHHHHHHTS----T-----TSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhh---hcccchHHHHHHHhhcC----C-----CCCCcCHHH
Confidence 9999999998765 35899999999999886421100 00000111111110100 0 112467899
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++.++.+ . ..-.++++++.+|
T Consensus 224 va~~v~~L~s~-~-~~itG~~i~vdGG 248 (270)
T 1yde_A 224 VGAAAVFLASE-A-NFCTGIELLVTGG 248 (270)
T ss_dssp HHHHHHHHHHH-C-TTCCSCEEEESTT
T ss_pred HHHHHHHHccc-C-CCcCCCEEEECCC
Confidence 99999988864 2 2223789999887
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.70 E-value=9e-16 Score=150.70 Aligned_cols=216 Identities=13% Similarity=0.095 Sum_probs=145.3
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|+||||||+||++++++|++.| .+|+++.|+... +.+++ .+..+.
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G---~~V~~~~r~~~~------~~~~~-----------------------~~~~~~ 49 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARG---YRVAIASRNPEE------AAQSL-----------------------GAVPLP 49 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCHH------HHHHH-----------------------TCEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH------HHHhh-----------------------CcEEEe
Confidence 6899999999999999999999998 678999997532 11110 256789
Q ss_pred ccCCCCCCCCCchhhHHH---HhCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---cCceEEE
Q 008324 92 GDISSEDLGLKDSNLKEE---LWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~---l~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~l~~~V 158 (570)
+|+++ +- ..+..+. ...++|+|||+||.... .+.++..+++|+.|+.++++.+... .+..++|
T Consensus 50 ~D~~~-~~---~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv 125 (239)
T 2ekp_A 50 TDLEK-DD---PKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVL 125 (239)
T ss_dssp CCTTT-SC---HHHHHHHHHHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred cCCch-HH---HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 99995 20 1112222 23479999999997532 2456778999999999999888531 2568999
Q ss_pred EEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHH
Q 008324 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (570)
Q Consensus 159 ~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~a 238 (570)
++||...+.... . .....|+.||+..
T Consensus 126 ~isS~~~~~~~~-------~-----------------------------------------------~~~~~Y~~sK~a~ 151 (239)
T 2ekp_A 126 FIGSVTTFTAGG-------P-----------------------------------------------VPIPAYTTAKTAL 151 (239)
T ss_dssp EECCGGGTSCCT-------T-----------------------------------------------SCCHHHHHHHHHH
T ss_pred EECchhhccCCC-------C-----------------------------------------------CCCccHHHHHHHH
Confidence 999986543210 0 1235799999999
Q ss_pred HHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHH
Q 008324 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (570)
Q Consensus 239 E~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii 313 (570)
|.+.+.+ ..+++++++||+.|.++..... .............. ....+...+|+|++++
T Consensus 152 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-------~~~~~~~~~~~~~~---------p~~~~~~~~dvA~~~~ 215 (239)
T 2ekp_A 152 LGLTRALAKEWARLGIRVNLLCPGYVETEFTLPL-------RQNPELYEPITARI---------PMGRWARPEEIARVAA 215 (239)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH-------HTCHHHHHHHHTTC---------TTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcCcEEEEEEeCCccCchhhcc-------ccCHHHHHHHHhcC---------CCCCCcCHHHHHHHHH
Confidence 9988765 3489999999999987643210 00011111111111 1123678999999999
Q ss_pred HHHHHhhCCCCCCceEEecCC
Q 008324 314 VAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 314 ~a~~~~~~~~~~~~iyni~s~ 334 (570)
.++.+... .-.++++++.+|
T Consensus 216 ~l~s~~~~-~~tG~~~~vdgG 235 (239)
T 2ekp_A 216 VLCGDEAE-YLTGQAVAVDGG 235 (239)
T ss_dssp HHTSGGGT-TCCSCEEEESTT
T ss_pred HHcCchhc-CCCCCEEEECCC
Confidence 88753322 223788888876
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=3.8e-16 Score=153.54 Aligned_cols=202 Identities=11% Similarity=0.065 Sum_probs=141.9
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
..+||+|+||||||+||++++++|++.| .+|+++.|+.... .....
T Consensus 4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~-------------------------------~~~~~ 49 (241)
T 1dhr_A 4 SGEARRVLVYGGRGALGSRCVQAFRARN---WWVASIDVVENEE-------------------------------ASASV 49 (241)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHTTT---CEEEEEESSCCTT-------------------------------SSEEE
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHhCC---CEEEEEeCChhhc-------------------------------cCCcE
Confidence 3568999999999999999999999998 6789999976432 12346
Q ss_pred EEeccCCCCCCCCCchhhHHHHh---------CCccEEEEcCccCC---c-----cccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW---------NELDIMVNSAAITK---F-----DERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~---------~~vdiViH~AA~v~---f-----~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
++.+|++ +.+..+.++ .++|+|||+||... + .+.++..+++|+.|+.++++++...
T Consensus 50 ~~~~D~~-------~~~~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 122 (241)
T 1dhr_A 50 IVKMTDS-------FTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKH 122 (241)
T ss_dssp ECCCCSC-------HHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCC-------CHHHHHHHHHHHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 7889999 444333443 37999999999753 1 1345677899999999999988763
Q ss_pred -cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+-.++|++||...+... +....
T Consensus 123 ~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 146 (241)
T 1dhr_A 123 LKEGGLLTLAGAKAALDGT--------------------------------------------------------PGMIG 146 (241)
T ss_dssp EEEEEEEEEECCGGGGSCC--------------------------------------------------------TTBHH
T ss_pred hccCCEEEEECCHHHccCC--------------------------------------------------------CCchH
Confidence 223589999997654321 12357
Q ss_pred HHHHHHHHHHHHHHh----c---cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeee
Q 008324 231 YVFTKTMGEMLMQQS----K---ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~----~---~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
|+.||+..+.+.+.. . .++++++++|+.|-++... ..... ......+
T Consensus 147 Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~-----------------~~~~~---------~~~~~~~ 200 (241)
T 1dhr_A 147 YGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNR-----------------KSMPE---------ADFSSWT 200 (241)
T ss_dssp HHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHH-----------------HHSTT---------SCGGGSE
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcccc-----------------ccCcc---------hhhccCC
Confidence 999999999998865 2 3689999999988664210 00000 0112357
Q ss_pred ehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|.+++|++++.++... ...-.++++++.++
T Consensus 201 ~~~~vA~~v~~l~~~~-~~~~~G~~~~v~g~ 230 (241)
T 1dhr_A 201 PLEFLVETFHDWITGN-KRPNSGSLIQVVTT 230 (241)
T ss_dssp EHHHHHHHHHHHHTTT-TCCCTTCEEEEEEE
T ss_pred CHHHHHHHHHHHhcCC-CcCccceEEEEeCC
Confidence 8899999999887532 22223778888765
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.69 E-value=1.1e-15 Score=153.04 Aligned_cols=232 Identities=15% Similarity=0.152 Sum_probs=150.8
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.-++||+++||||+|+||++++++|++.| .+|+++.|..... .+.+.+++ +. ...++
T Consensus 14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G---~~V~~~~~~~~~~--~~~~~~~~---------~~---------~~~~~ 70 (270)
T 3is3_A 14 GRLDGKVALVTGSGRGIGAAVAVHLGRLG---AKVVVNYANSTKD--AEKVVSEI---------KA---------LGSDA 70 (270)
T ss_dssp TCCTTCEEEESCTTSHHHHHHHHHHHHTT---CEEEEEESSCHHH--HHHHHHHH---------HH---------TTCCE
T ss_pred CCcCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCCHHH--HHHHHHHH---------Hh---------cCCcE
Confidence 34789999999999999999999999999 6777776643221 12222111 11 13678
Q ss_pred EEEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc-c
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-V 152 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~-~ 152 (570)
.++.+|+++ .+..+.++ ..+|++||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 71 ~~~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 143 (270)
T 3is3_A 71 IAIKADIRQ-------VPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLT 143 (270)
T ss_dssp EEEECCTTS-------HHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCC
T ss_pred EEEEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 899999995 33333443 368999999998643 2456778999999999999988763 3
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
.-.++|++||....... . +....|+
T Consensus 144 ~~g~iv~isS~~~~~~~--------~-----------------------------------------------~~~~~Y~ 168 (270)
T 3is3_A 144 EGGRIVLTSSNTSKDFS--------V-----------------------------------------------PKHSLYS 168 (270)
T ss_dssp TTCEEEEECCTTTTTCC--------C-----------------------------------------------TTCHHHH
T ss_pred cCCeEEEEeCchhccCC--------C-----------------------------------------------CCCchhH
Confidence 33489999996421100 0 1235799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCC-ccccC--ccchHHHHHHHhcCCceeeecCCCeeeeeee
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFP-GWVED--LKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~-gw~~~--~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.||+..+.+.+.+ ..++++..++|+.|.++...... .+... ............... ....+..
T Consensus 169 asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~ 239 (270)
T 3is3_A 169 GSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHAS---------PLHRNGW 239 (270)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHS---------TTCSCBC
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcC---------CCCCCCC
Confidence 9999999998765 35899999999999886532100 00000 001111111111110 1123467
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.+|+|++++.++..... --.++++++.+|
T Consensus 240 p~dvA~~v~~L~s~~~~-~itG~~i~vdGG 268 (270)
T 3is3_A 240 PQDVANVVGFLVSKEGE-WVNGKVLTLDGG 268 (270)
T ss_dssp HHHHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHHcCCccC-CccCcEEEeCCC
Confidence 99999999988853332 223789999876
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.69 E-value=8.7e-16 Score=152.23 Aligned_cols=202 Identities=11% Similarity=0.058 Sum_probs=131.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||++++++|++.| .+|+++.|+..... .+.++ +++. ..++.+
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~~---~~~~~---------~~~~---------~~~~~~ 60 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEG---FTVFAGRRNGEKLA---PLVAE---------IEAA---------GGRIVA 60 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTT---CEEEEEESSGGGGH---HHHHH---------HHHT---------TCEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHH---HHHHH---------HHhc---------CCeEEE
Confidence 579999999999999999999999999 67899999764432 11111 1111 257889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---cC
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~ 153 (570)
+.+|+++ .+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+
T Consensus 61 ~~~Dv~~-------~~~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~ 133 (252)
T 3h7a_A 61 RSLDARN-------EDEVTAFLNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG 133 (252)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EECcCCC-------HHHHHHHHHHHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 9999995 443444443 68999999997542 2446778999999999998877431 24
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||....... +....|+.
T Consensus 134 ~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 157 (252)
T 3h7a_A 134 QGKIFFTGATASLRGG--------------------------------------------------------SGFAAFAS 157 (252)
T ss_dssp CEEEEEEEEGGGTCCC--------------------------------------------------------TTCHHHHH
T ss_pred CcEEEEECCHHHcCCC--------------------------------------------------------CCCccHHH
Confidence 5689999997543211 12357999
Q ss_pred HHHHHHHHHHHh-----ccCCcE-EEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 234 TKTMGEMLMQQS-----KENLSL-VIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~-~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
||+..+.+.+.. ..++.+ .++.|+.|.++...... . .... . ........ ++..+|
T Consensus 158 sKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~---~------~~~~--------~-~~~~~~~~-~~~ped 218 (252)
T 3h7a_A 158 AKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERR---E------QMFG--------K-DALANPDL-LMPPAA 218 (252)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------------------------------------------CCHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccc---h------hhhh--------h-hhhcCCcc-CCCHHH
Confidence 999999888755 347899 89999998775432110 0 0000 0 01111122 789999
Q ss_pred HHHHHHHHHH
Q 008324 308 VVNAMIVAMV 317 (570)
Q Consensus 308 va~aii~a~~ 317 (570)
+|++++.++.
T Consensus 219 vA~~~~~l~s 228 (252)
T 3h7a_A 219 VAGAYWQLYQ 228 (252)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999999886
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.69 E-value=5.4e-16 Score=155.83 Aligned_cols=207 Identities=15% Similarity=0.153 Sum_probs=136.7
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.++||+|+||||||+||++++++|++.| .+|+++.|+... .+.+. +.++... ...++.
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G---~~V~~~~r~~~~---~~~~~---------~~~~~~~-------~~~~~~ 86 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQG---LKVVGCARTVGN---IEELA---------AECKSAG-------YPGTLI 86 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH---------HHHHHTT-------CSSEEE
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEECChHH---HHHHH---------HHHHhcC-------CCceEE
Confidence 3789999999999999999999999998 678999886422 11111 1111111 024688
Q ss_pred EEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHH----HHHHHHHHHH
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLG----VIHLVNFAKK 150 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~g----t~~ll~la~~ 150 (570)
++.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.| ++.++..+++
T Consensus 87 ~~~~Dl~~-------~~~v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~ 159 (279)
T 1xg5_A 87 PYRCDLSN-------EEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKE 159 (279)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEEecCCC-------HHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 89999995 333334433 79999999997532 23467789999999 6666777666
Q ss_pred ccCc--eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 008324 151 CVKL--KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (570)
Q Consensus 151 ~~~l--~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
. +. .++|++||...+.... . ...
T Consensus 160 ~-~~~~g~iv~isS~~~~~~~~-------~-----------------------------------------------~~~ 184 (279)
T 1xg5_A 160 R-NVDDGHIININSMSGHRVLP-------L-----------------------------------------------SVT 184 (279)
T ss_dssp T-TCCSCEEEEECCGGGTSCCS-------C-----------------------------------------------GGG
T ss_pred c-CCCCceEEEEcChhhcccCC-------C-----------------------------------------------CCC
Confidence 4 44 7999999986543110 0 113
Q ss_pred chHHHHHHHHHHHHHHh-------ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeee
Q 008324 229 NTYVFTKTMGEMLMQQS-------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMD 301 (570)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-------~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d 301 (570)
..|+.||+..|.+++.+ ..++++++++|+.|.++.... .... .... +.... ....
T Consensus 185 ~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~---~~~~--~~~~-~~~~~------------~~~~ 246 (279)
T 1xg5_A 185 HFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFK---LHDK--DPEK-AAATY------------EQMK 246 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHH---HTTT--CHHH-HHHHH------------C---
T ss_pred chhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhh---hccc--ChhH-Hhhhc------------cccc
Confidence 57999999998887643 247999999999997753200 0000 0001 11000 1123
Q ss_pred eeehHHHHHHHHHHHH
Q 008324 302 VIPVDMVVNAMIVAMV 317 (570)
Q Consensus 302 ~VpVDdva~aii~a~~ 317 (570)
++.++|+|++++.++.
T Consensus 247 ~~~~~dvA~~i~~l~~ 262 (279)
T 1xg5_A 247 CLKPEDVAEAVIYVLS 262 (279)
T ss_dssp CBCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhc
Confidence 5789999999998886
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.69 E-value=4.2e-16 Score=154.34 Aligned_cols=198 Identities=12% Similarity=0.054 Sum_probs=141.8
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
||+|+||||+|+||++++++|++.| .+|+++.|+..... -..+.
T Consensus 22 ~k~vlITGas~gIG~~la~~l~~~G---~~V~~~~r~~~~~~---------------------------------~~~~~ 65 (251)
T 3orf_A 22 SKNILVLGGSGALGAEVVKFFKSKS---WNTISIDFRENPNA---------------------------------DHSFT 65 (251)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCTTS---------------------------------SEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCccccc---------------------------------ccceE
Confidence 7999999999999999999999999 67899999764321 12467
Q ss_pred ccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHHc-cCce
Q 008324 92 GDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC-VKLK 155 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f--------~~~~~~~~~~Nv~gt~~ll~la~~~-~~l~ 155 (570)
.|+++ .+..+.+++ .+|+|||+||.... .+.++..+++|+.|+.++++++... ..-.
T Consensus 66 ~d~~d-------~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g 138 (251)
T 3orf_A 66 IKDSG-------EEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGG 138 (251)
T ss_dssp CSCSS-------HHHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred EEeCC-------HHHHHHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCC
Confidence 78774 333334433 57999999996421 2446777899999999999998763 2334
Q ss_pred EEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHH
Q 008324 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (570)
Q Consensus 156 ~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
++|++||...+... .....|+.||
T Consensus 139 ~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK 162 (251)
T 3orf_A 139 LFVLTGASAALNRT--------------------------------------------------------SGMIAYGATK 162 (251)
T ss_dssp EEEEECCGGGGSCC--------------------------------------------------------TTBHHHHHHH
T ss_pred EEEEEechhhccCC--------------------------------------------------------CCCchhHHHH
Confidence 89999997654211 1235799999
Q ss_pred HHHHHHHHHh----c---cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHH
Q 008324 236 TMGEMLMQQS----K---ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (570)
Q Consensus 236 ~~aE~lv~~~----~---~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
+..|.+++.+ . .++++.+++|+.|.++..+ .... ......+++++|+
T Consensus 163 aa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~-----------------~~~~---------~~~~~~~~~~~dv 216 (251)
T 3orf_A 163 AATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNR-----------------KYMS---------DANFDDWTPLSEV 216 (251)
T ss_dssp HHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHH-----------------HHCT---------TSCGGGSBCHHHH
T ss_pred HHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchh-----------------hhcc---------cccccccCCHHHH
Confidence 9999999865 1 4789999999988764221 1111 1123456889999
Q ss_pred HHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|++++.++.........++++++.++
T Consensus 217 a~~i~~l~~~~~~~~~tG~~i~v~~g 242 (251)
T 3orf_A 217 AEKLFEWSTNSDSRPTNGSLVKFETK 242 (251)
T ss_dssp HHHHHHHHHCGGGCCCTTCEEEEEEE
T ss_pred HHHHHHHhcCccccCCcceEEEEecC
Confidence 99999998751223334788998876
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.69 E-value=4.4e-16 Score=155.64 Aligned_cols=234 Identities=16% Similarity=0.146 Sum_probs=150.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||++++++|++.| .+|+++.|+.... +... +.++...+ ...+.+
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~---~~~~---------~~l~~~~~-------~~~~~~ 65 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEG---ANVLINGRREENV---NETI---------KEIRAQYP-------DAILQP 65 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSHHHH---HHHH---------HHHHHHCT-------TCEEEE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHH---------HHHHhhCC-------CceEEE
Confidence 679999999999999999999999999 6788888864321 1111 12222221 246788
Q ss_pred EeccCCCCCCCCCchhhHHHHhC---CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---cCceE
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN---ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKV 156 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~---~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~l~~ 156 (570)
+.+|+++ .+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++.+.+... .+..+
T Consensus 66 ~~~D~~~-------~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~ 138 (267)
T 3t4x_A 66 VVADLGT-------EQGCQDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGR 138 (267)
T ss_dssp EECCTTS-------HHHHHHHHHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEE
T ss_pred EecCCCC-------HHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCE
Confidence 9999994 443444443 79999999997532 2456777999999988887766442 25578
Q ss_pred EEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHH
Q 008324 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (570)
Q Consensus 157 ~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+|++||...+... .....|+.||+
T Consensus 139 iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKa 162 (267)
T 3t4x_A 139 VIFIASEAAIMPS--------------------------------------------------------QEMAHYSATKT 162 (267)
T ss_dssp EEEECCGGGTSCC--------------------------------------------------------TTCHHHHHHHH
T ss_pred EEEEcchhhccCC--------------------------------------------------------CcchHHHHHHH
Confidence 9999997543211 12357999999
Q ss_pred HHHHHHHHh-----ccCCcEEEEecCceecCCCCCCC-ccccCc-cchHHHHHHHhcCCceeeecCCCeeeeeeehHHHH
Q 008324 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFP-GWVEDL-KTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (570)
Q Consensus 237 ~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~-gw~~~~-~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
..+.+.+.+ ..++++..++|+.|.++..+... ....+. ............... .......+..++|+|
T Consensus 163 a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~r~~~pedvA 237 (267)
T 3t4x_A 163 MQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENR-----PTSIIQRLIRPEEIA 237 (267)
T ss_dssp HHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHC-----TTCSSCSCBCTHHHH
T ss_pred HHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccC-----CcccccCccCHHHHH
Confidence 999998765 34699999999998775321000 000000 000011111110000 001123578899999
Q ss_pred HHHHHHHHHhhCCCCCCceEEecCC
Q 008324 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++.++.+... .-.|+++++.+|
T Consensus 238 ~~v~fL~s~~~~-~itG~~i~vdGG 261 (267)
T 3t4x_A 238 HLVTFLSSPLSS-AINGSALRIDGG 261 (267)
T ss_dssp HHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHcCcccc-CccCCeEEECCC
Confidence 999988864332 223789999888
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.69 E-value=1e-15 Score=151.73 Aligned_cols=225 Identities=14% Similarity=0.177 Sum_probs=146.4
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
||+++||||+|+||++++++|++.|.. ..|++..|+... .+.+. ++. ..++.++.
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~-~~v~~~~r~~~~---~~~~~-------------~~~--------~~~~~~~~ 56 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKD-TVVYGVARSEAP---LKKLK-------------EKY--------GDRFFYVV 56 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSS-CEEEEEESCHHH---HHHHH-------------HHH--------GGGEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCC-eEEEEecCCHHH---HHHHH-------------HHh--------CCceEEEE
Confidence 789999999999999999999998744 367777776422 12221 111 25788999
Q ss_pred ccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHHc---cC
Q 008324 92 GDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f--------~~~~~~~~~~Nv~gt~~ll~la~~~---~~ 153 (570)
+|+++ .+..+.++ ..+|++||+||.... .+.++..+++|+.|+.++++++... .+
T Consensus 57 ~Dv~~-------~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~ 129 (254)
T 3kzv_A 57 GDITE-------DSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN 129 (254)
T ss_dssp SCTTS-------HHHHHHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCCCC-------HHHHHHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 99995 44334443 378999999997432 2456778999999999999988431 13
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
.++|++||....... +....|+.
T Consensus 130 -g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 152 (254)
T 3kzv_A 130 -GNVVFVSSDACNMYF--------------------------------------------------------SSWGAYGS 152 (254)
T ss_dssp -CEEEEECCSCCCCSS--------------------------------------------------------CCSHHHHH
T ss_pred -CeEEEEcCchhccCC--------------------------------------------------------CCcchHHH
Confidence 689999997654321 12357999
Q ss_pred HHHHHHHHHHHh---ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHH
Q 008324 234 TKTMGEMLMQQS---KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (570)
Q Consensus 234 sK~~aE~lv~~~---~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ 310 (570)
||+..+.+.+.. ..++++..++|+.|.++.....................+.... ....+...+|+|+
T Consensus 153 sK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~r~~~p~dva~ 223 (254)
T 3kzv_A 153 SKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLK---------ENNQLLDSSVPAT 223 (254)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHH---------TTC----CHHHHH
T ss_pred HHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHH---------hcCCcCCcccHHH
Confidence 999999998765 2589999999999988765433221110000111111111110 1124678899999
Q ss_pred HHHHHHHHhhCCCCCCceEEecCC
Q 008324 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++.++.+.....-.++++++.++
T Consensus 224 ~v~~L~s~~~~~~itG~~i~vdg~ 247 (254)
T 3kzv_A 224 VYAKLALHGIPDGVNGQYLSYNDP 247 (254)
T ss_dssp HHHHHHHHCCCGGGTTCEEETTCG
T ss_pred HHHHHHhhcccCCCCccEEEecCc
Confidence 999888644212123788888765
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.69 E-value=5.6e-16 Score=154.38 Aligned_cols=195 Identities=14% Similarity=0.170 Sum_probs=133.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+||||||+|+||++++++|++.| .+|+++.|+.... +.+.++ +.+. ..++.+
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~~---------~~~~---------~~~~~~ 82 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSLG---ARVVLTARDVEKL---RAVERE---------IVAA---------GGEAES 82 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHH---------HHHT---------TCEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHH---------HHHh---------CCceeE
Confidence 678999999999999999999999998 6788888865321 121111 1111 257889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHHc---
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKKC--- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~----f----~~~~~~~~~~Nv~gt~~ll~la~~~--- 151 (570)
+.+|+++ .+..+.++ ..+|+|||+||... + .+.++..+++|+.|+.++++.+...
T Consensus 83 ~~~D~~~-------~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~ 155 (262)
T 3rkr_A 83 HACDLSH-------SDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIA 155 (262)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEecCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 9999995 33333433 35899999999731 1 2446778999999999999887542
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||....... .....|
T Consensus 156 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 179 (262)
T 3rkr_A 156 AKRGHIINISSLAGKNPV--------------------------------------------------------ADGAAY 179 (262)
T ss_dssp TTCCEEEEECSSCSSCCC--------------------------------------------------------TTCHHH
T ss_pred CCCceEEEEechhhcCCC--------------------------------------------------------CCCchH
Confidence 256789999997543211 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+++.+ ..++++.+++||.|.++...... .......++..+
T Consensus 180 ~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------------------------~~~~~~~~~~p~ 233 (262)
T 3rkr_A 180 TASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS--------------------------AKKSALGAIEPD 233 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------------CCCHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc--------------------------cccccccCCCHH
Confidence 99999999988755 35899999999998775432110 001123457899
Q ss_pred HHHHHHHHHHH
Q 008324 307 MVVNAMIVAMV 317 (570)
Q Consensus 307 dva~aii~a~~ 317 (570)
|+|++++.++.
T Consensus 234 dvA~~v~~l~s 244 (262)
T 3rkr_A 234 DIADVVALLAT 244 (262)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhc
Confidence 99999998875
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.69 E-value=9.5e-16 Score=154.98 Aligned_cols=227 Identities=15% Similarity=0.173 Sum_probs=149.9
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
..-++||+++||||+|+||++++++|++.|....+|++..|+... .+.+.+ .+....+ ..+
T Consensus 28 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~---~~~~~~---------~l~~~~~-------~~~ 88 (287)
T 3rku_A 28 AERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEK---LEELKK---------TIDQEFP-------NAK 88 (287)
T ss_dssp HHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHH---HHHHHH---------HHHHHCT-------TCE
T ss_pred hhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHH---HHHHHH---------HHHhhCC-------CCe
Confidence 345789999999999999999999999988543488888886432 122221 1222211 257
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~----f----~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
+.++.+|++++ +..+.+++ ++|+|||+||... + .+.++..+++|+.|+.++++++...
T Consensus 89 ~~~~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 161 (287)
T 3rku_A 89 VHVAQLDITQA-------EKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPI 161 (287)
T ss_dssp EEEEECCTTCG-------GGHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred EEEEECCCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999953 33344443 5899999999753 1 2457788999999999999988431
Q ss_pred ---cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 008324 152 ---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (570)
Q Consensus 152 ---~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
.+..++|++||....... ...
T Consensus 162 m~~~~~g~IV~isS~~~~~~~--------------------------------------------------------~~~ 185 (287)
T 3rku_A 162 FQAKNSGDIVNLGSIAGRDAY--------------------------------------------------------PTG 185 (287)
T ss_dssp HHHHTCCEEEEECCGGGTSCC--------------------------------------------------------TTC
T ss_pred HHhcCCCeEEEECChhhcCCC--------------------------------------------------------CCC
Confidence 255789999997543211 123
Q ss_pred chHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeee
Q 008324 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.. ..++++..++|+.|.++... ................. ..+
T Consensus 186 ~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~------~~~~~~~~~~~~~~~~~------------~p~ 247 (287)
T 3rku_A 186 SIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSL------VRYRGNEEQAKNVYKDT------------TPL 247 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHH------HHTTTCHHHHHHHHTTS------------CCE
T ss_pred chHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcccc------ccccCcHHHHHHhhccc------------CCC
Confidence 57999999999988765 35899999999999875320 00000001111111111 123
Q ss_pred ehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
..+|+|++++.++..... .-.++++.+.++
T Consensus 248 ~pedvA~~v~~l~s~~~~-~i~g~~i~v~~g 277 (287)
T 3rku_A 248 MADDVADLIVYATSRKQN-TVIADTLIFPTN 277 (287)
T ss_dssp EHHHHHHHHHHHHTSCTT-EEEEEEEEEETT
T ss_pred CHHHHHHHHHHHhCCCCC-eEecceEEeeCC
Confidence 789999999998853221 112567777765
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.68 E-value=9.6e-16 Score=151.60 Aligned_cols=223 Identities=13% Similarity=0.134 Sum_probs=148.4
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.++||+|+||||+|+||++++++|++.| .+|+++.+..... .+....++ .+. ..++.
T Consensus 4 ~l~~k~vlITGas~gIG~~~a~~l~~~G---~~v~~~~~~~~~~--~~~~~~~~---------~~~---------~~~~~ 60 (255)
T 3icc_A 4 MLKGKVALVTGASRGIGRAIAKRLANDG---ALVAIHYGNRKEE--AEETVYEI---------QSN---------GGSAF 60 (255)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCSHH--HHHHHHHH---------HHT---------TCEEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCC---CeEEEEeCCchHH--HHHHHHHH---------Hhc---------CCceE
Confidence 4689999999999999999999999998 5677765543321 11111111 111 35788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhC-------------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHH
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWN-------------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFA 148 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la 148 (570)
++.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+
T Consensus 61 ~~~~D~~~-------~~~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 133 (255)
T 3icc_A 61 SIGANLES-------LHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQA 133 (255)
T ss_dssp EEECCTTS-------HHHHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred EEecCcCC-------HHHHHHHHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHH
Confidence 99999995 332333322 39999999997532 1345677899999999999998
Q ss_pred HHc-cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCC
Q 008324 149 KKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (570)
Q Consensus 149 ~~~-~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 227 (570)
... ++-.++|++||....... +.
T Consensus 134 ~~~~~~~~~iv~isS~~~~~~~--------------------------------------------------------~~ 157 (255)
T 3icc_A 134 LSRLRDNSRIINISSAATRISL--------------------------------------------------------PD 157 (255)
T ss_dssp TTTEEEEEEEEEECCGGGTSCC--------------------------------------------------------TT
T ss_pred HHhhCCCCEEEEeCChhhccCC--------------------------------------------------------CC
Confidence 763 334589999997543221 12
Q ss_pred CchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeee
Q 008324 228 PNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDV 302 (570)
Q Consensus 228 ~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
...|+.||+..+.+.+.. ..++++..++|+.|.++....... . ........... ....+
T Consensus 158 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~----~~~~~~~~~~~---------~~~~~ 221 (255)
T 3icc_A 158 FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLS---D----PMMKQYATTIS---------AFNRL 221 (255)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTT---S----HHHHHHHHHTS---------TTSSC
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcc---c----HHHHHhhhccC---------CcCCC
Confidence 357999999999988754 358999999999998876533211 1 11111111111 11235
Q ss_pred eehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
..++|+|++++.++..... .-.++++++.+|
T Consensus 222 ~~~~dva~~~~~l~s~~~~-~~tG~~i~vdgG 252 (255)
T 3icc_A 222 GEVEDIADTAAFLASPDSR-WVTGQLIDVSGG 252 (255)
T ss_dssp BCHHHHHHHHHHHHSGGGT-TCCSCEEEESSS
T ss_pred CCHHHHHHHHHHHhCcccC-CccCCEEEecCC
Confidence 6789999999988753322 223789999887
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.68 E-value=4.8e-16 Score=155.40 Aligned_cols=201 Identities=15% Similarity=0.177 Sum_probs=137.9
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.-+.+|+|+||||+|+||++++++|++.| .+|+++.|+.. +++ .....++
T Consensus 12 ~~~~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~------~~~---------------------~~~~~~~ 61 (266)
T 3p19_A 12 RGSMKKLVVITGASSGIGEAIARRFSEEG---HPLLLLARRVE------RLK---------------------ALNLPNT 61 (266)
T ss_dssp ---CCCEEEEESTTSHHHHHHHHHHHHTT---CCEEEEESCHH------HHH---------------------TTCCTTE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHH------HHH---------------------HhhcCCc
Confidence 34678999999999999999999999999 56788888632 221 0112478
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c-
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C- 151 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~- 151 (570)
.++.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.. +
T Consensus 62 ~~~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~ 134 (266)
T 3p19_A 62 LCAQVDVTD-------KYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMK 134 (266)
T ss_dssp EEEECCTTC-------HHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred eEEEecCCC-------HHHHHHHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 899999994 333334443 79999999997532 245677899999999998887653 1
Q ss_pred -cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+..++|++||...+... +....
T Consensus 135 ~~~~g~IV~isS~~~~~~~--------------------------------------------------------~~~~~ 158 (266)
T 3p19_A 135 ARNCGTIINISSIAGKKTF--------------------------------------------------------PDHAA 158 (266)
T ss_dssp HHTCCEEEEECCGGGTSCC--------------------------------------------------------TTCHH
T ss_pred hcCCcEEEEEcChhhCCCC--------------------------------------------------------CCCch
Confidence 256799999997644211 12357
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..+.+.+.+ ..++++.+++||.|.++...... . ............ ....++.+
T Consensus 159 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---~--~~~~~~~~~~~~-----------~~~r~~~p 222 (266)
T 3p19_A 159 YCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTT---S--QQIKDGYDAWRV-----------DMGGVLAA 222 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCS---C--HHHHHHHHHHHH-----------HTTCCBCH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhccc---c--hhhhHHHHhhcc-----------cccCCCCH
Confidence 999999999888755 35899999999999886542211 0 000011110000 01236789
Q ss_pred HHHHHHHHHHHH
Q 008324 306 DMVVNAMIVAMV 317 (570)
Q Consensus 306 Ddva~aii~a~~ 317 (570)
+|+|++++.++.
T Consensus 223 edvA~av~~l~~ 234 (266)
T 3p19_A 223 DDVARAVLFAYQ 234 (266)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc
Confidence 999999999886
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.4e-16 Score=156.96 Aligned_cols=211 Identities=15% Similarity=0.162 Sum_probs=126.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++ + ..|+++.|+.... +.+. + ..++.+
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~-g---~~v~~~~r~~~~~---~~~~-------------~----------~~~~~~ 52 (245)
T 3e9n_A 3 LKKKIAVVTGATGGMGIEIVKDLSR-D---HIVYALGRNPEHL---AALA-------------E----------IEGVEP 52 (245)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHTT-T---SEEEEEESCHHHH---HHHH-------------T----------STTEEE
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHhC-C---CeEEEEeCCHHHH---HHHH-------------h----------hcCCcc
Confidence 4689999999999999999999987 6 6788888864221 1111 0 246888
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc--cCceEEEEE
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFVHV 160 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~--~~l~~~V~v 160 (570)
+.+|++++..--...+.. .-..++|+|||+||.... .+.++..+++|+.|+.++++.+... ++-.++|++
T Consensus 53 ~~~D~~~~~~~~~~~~~~-~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~i 131 (245)
T 3e9n_A 53 IESDIVKEVLEEGGVDKL-KNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYI 131 (245)
T ss_dssp EECCHHHHHHTSSSCGGG-TTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred eecccchHHHHHHHHHHH-HhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEE
Confidence 999998542100001111 112469999999997642 1346677899999998888877542 112689999
Q ss_pred ecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHH
Q 008324 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (570)
Q Consensus 161 STa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~ 240 (570)
||...+... +....|+.||+..|.
T Consensus 132 sS~~~~~~~--------------------------------------------------------~~~~~Y~asK~a~~~ 155 (245)
T 3e9n_A 132 NSGAGNGPH--------------------------------------------------------PGNTIYAASKHALRG 155 (245)
T ss_dssp C------------------------------------------------------------------CHHHHHHHHHHHH
T ss_pred cCcccccCC--------------------------------------------------------CCchHHHHHHHHHHH
Confidence 998655421 123579999999999
Q ss_pred HHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHH
Q 008324 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (570)
Q Consensus 241 lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a 315 (570)
+++.+ ..++++.+++|+.|.++..... .+. ...+ .....++.++|+|++++.+
T Consensus 156 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~----------~~~~---------~~~~~~~~p~dvA~~i~~l 213 (245)
T 3e9n_A 156 LADAFRKEEANNGIRVSTVSPGPTNTPMLQGL---MDS----------QGTN---------FRPEIYIEPKEIANAIRFV 213 (245)
T ss_dssp HHHHHHHHHGGGTCEEEEEEECCC--------------------------------------CCGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHhhhcCeEEEEEecCCccCchhhhh---hhh----------hhcc---------cccccCCCHHHHHHHHHHH
Confidence 98765 3579999999999988643211 000 0000 0112367899999999998
Q ss_pred HHHhhCCCCCCceEEecC
Q 008324 316 MVAHAKQPSDANIYHVGS 333 (570)
Q Consensus 316 ~~~~~~~~~~~~iyni~s 333 (570)
+... ..+.+||+.=
T Consensus 214 ~~~~----~~~~~~~i~~ 227 (245)
T 3e9n_A 214 IDAG----ETTQITNVDV 227 (245)
T ss_dssp HTSC----TTEEEEEEEE
T ss_pred HcCC----CccceeeeEE
Confidence 8522 2356787653
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.4e-15 Score=152.69 Aligned_cols=223 Identities=14% Similarity=0.108 Sum_probs=148.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||++++++|++.| .+|+++.|+....... .+++ +. ...++..
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~---~~~~---------~~---------~~~~~~~ 86 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAG---AHVILHGVKPGSTAAV---QQRI---------IA---------SGGTAQE 86 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSTTTTHHH---HHHH---------HH---------TTCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEcCCHHHHHHH---HHHH---------Hh---------cCCeEEE
Confidence 689999999999999999999999999 6789999976543221 1111 11 1367889
Q ss_pred EeccCCCCCCCCCchhhHHHHh------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---cC
Q 008324 90 VPGDISSEDLGLKDSNLKEELW------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~ 153 (570)
+.+|+++++ ..+.++ ..+|++||+||.... .+.++..+++|+.|+.++++++... .+
T Consensus 87 ~~~Dv~~~~-------~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~ 159 (275)
T 4imr_A 87 LAGDLSEAG-------AGTDLIERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK 159 (275)
T ss_dssp EECCTTSTT-------HHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EEecCCCHH-------HHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 999999643 222333 379999999997532 2456778999999999999988431 25
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||....... .....|+.
T Consensus 160 ~g~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 183 (275)
T 4imr_A 160 WGRVVSIGSINQLRPK--------------------------------------------------------SVVTAYAA 183 (275)
T ss_dssp CEEEEEECCGGGTSCC--------------------------------------------------------TTBHHHHH
T ss_pred CcEEEEECCHHhCCCC--------------------------------------------------------CCchhhHH
Confidence 5789999997543210 12356999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHH
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..+.+.+.. ..++++..++|+.|.++...... ............... ....+...+|+
T Consensus 184 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~------~~~~~~~~~~~~~~~--------p~~r~~~pedv 249 (275)
T 4imr_A 184 TKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRR------AQDPEGWDEYVRTLN--------WMGRAGRPEEM 249 (275)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHH------HHCHHHHHHHHHHHS--------TTCSCBCGGGG
T ss_pred HHHHHHHHHHHHHHHhcccCcEEEEEEeccccCccccccc------ccChHHHHHHHhhcC--------ccCCCcCHHHH
Confidence 999999988755 34899999999999775321000 000011111111000 01124568899
Q ss_pred HHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|++++.++.+... --.|+++++.+|
T Consensus 250 A~~v~fL~s~~a~-~itG~~i~vdGG 274 (275)
T 4imr_A 250 VGAALFLASEACS-FMTGETIFLTGG 274 (275)
T ss_dssp HHHHHHHHSGGGT-TCCSCEEEESSC
T ss_pred HHHHHHHcCcccC-CCCCCEEEeCCC
Confidence 9999988864332 223788988765
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.68 E-value=7.5e-16 Score=154.94 Aligned_cols=216 Identities=11% Similarity=0.063 Sum_probs=146.9
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
-++||+|+||||+|+||++++++|++.| .+|+++.|+... .+.+.++ . ..++.
T Consensus 27 ~l~~k~vlVTGas~GIG~aia~~l~~~G---~~Vi~~~r~~~~---~~~~~~~-------------~--------~~~~~ 79 (281)
T 3ppi_A 27 QFEGASAIVSGGAGGLGEATVRRLHADG---LGVVIADLAAEK---GKALADE-------------L--------GNRAE 79 (281)
T ss_dssp GGTTEEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH-------------H--------CTTEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCChHH---HHHHHHH-------------h--------CCceE
Confidence 3689999999999999999999999998 678888886422 1121111 1 25788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhC------CccEEEEcCccCC-c------------cccHHHHHHHhHHHHHHHHHHHH
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWN------ELDIMVNSAAITK-F------------DERYDVAFGINTLGVIHLVNFAK 149 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~------~vdiViH~AA~v~-f------------~~~~~~~~~~Nv~gt~~ll~la~ 149 (570)
++.+|+++ .+..+.+++ .+|+|||+||... . .+.++..+++|+.|+.++++++.
T Consensus 80 ~~~~Dl~~-------~~~v~~~~~~~~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 152 (281)
T 3ppi_A 80 FVSTNVTS-------EDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVA 152 (281)
T ss_dssp EEECCTTC-------HHHHHHHHHHHTTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred EEEcCCCC-------HHHHHHHHHHHHHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 99999995 443344443 5899999955321 1 12367889999999999999886
Q ss_pred Hc---------cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhcccc
Q 008324 150 KC---------VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTE 220 (570)
Q Consensus 150 ~~---------~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 220 (570)
.. .+-.++|++||...+...
T Consensus 153 ~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------------------------------------------- 181 (281)
T 3ppi_A 153 ASIAAAEPRENGERGALVLTASIAGYEGQ--------------------------------------------------- 181 (281)
T ss_dssp HHHHTSCCCTTSCCEEEEEECCGGGTSCC---------------------------------------------------
T ss_pred HHHHhhcccccCCCeEEEEEecccccCCC---------------------------------------------------
Confidence 42 134589999997654221
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecC
Q 008324 221 RAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGE 295 (570)
Q Consensus 221 ~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~ 295 (570)
.....|+.||+..+.+.+.. ..++++..++|+.|.++.....+ .........+..
T Consensus 182 -----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---------~~~~~~~~~~~~------ 241 (281)
T 3ppi_A 182 -----IGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVG---------EEALAKFAANIP------ 241 (281)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTC---------HHHHHHHHHTCC------
T ss_pred -----CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhccc---------HHHHHHHHhcCC------
Confidence 12357999999888877654 34799999999998775332110 111222222111
Q ss_pred CCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 296 TKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 296 ~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
....++.++|+|++++.++.+ ..-.++++++.+|
T Consensus 242 --~~~~~~~pedvA~~v~~l~s~---~~~tG~~i~vdGG 275 (281)
T 3ppi_A 242 --FPKRLGTPDEFADAAAFLLTN---GYINGEVMRLDGA 275 (281)
T ss_dssp --SSSSCBCHHHHHHHHHHHHHC---SSCCSCEEEESTT
T ss_pred --CCCCCCCHHHHHHHHHHHHcC---CCcCCcEEEECCC
Confidence 013467899999999998863 2224789999887
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.1e-15 Score=153.39 Aligned_cols=200 Identities=14% Similarity=0.109 Sum_probs=131.7
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+.+|+++||||+|+||++++++|++.| .+|+++.|+... .+.+.+ +. ..++.+
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~---~~~~~~-------------~~--------~~~~~~ 78 (272)
T 4dyv_A 26 TGKKIAIVTGAGSGVGRAVAVALAGAG---YGVALAGRRLDA---LQETAA-------------EI--------GDDALC 78 (272)
T ss_dssp --CCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHH-------------HH--------TSCCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHH-------------Hh--------CCCeEE
Confidence 568999999999999999999999999 678888886422 111111 11 257889
Q ss_pred EeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHHc-c-
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC-V- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f--------~~~~~~~~~~Nv~gt~~ll~la~~~-~- 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 79 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~ 151 (272)
T 4dyv_A 79 VPTDVTD-------PDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKA 151 (272)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHh
Confidence 9999995 443444443 79999999997532 2446778999999999998877652 1
Q ss_pred -C--ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc
Q 008324 153 -K--LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (570)
Q Consensus 153 -~--l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
+ -.++|++||....... +...
T Consensus 152 ~~~~~g~IV~isS~~~~~~~--------------------------------------------------------~~~~ 175 (272)
T 4dyv_A 152 QEPRGGRIINNGSISATSPR--------------------------------------------------------PYSA 175 (272)
T ss_dssp SSSCCEEEEEECCSSTTSCC--------------------------------------------------------TTCH
T ss_pred CCCCCcEEEEECchhhcCCC--------------------------------------------------------CCch
Confidence 1 3589999997543211 1235
Q ss_pred hHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeee
Q 008324 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (570)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.|+.||+..+.+.+.. ..++++..++|+.|.++..+.... . ..... .......+..
T Consensus 176 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~---~--------------~~~~~--~~~~~~~~~~ 236 (272)
T 4dyv_A 176 PYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKA---G--------------VPQAD--LSIKVEPVMD 236 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-------------------------------------------C
T ss_pred HHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcc---c--------------chhhh--hcccccCCCC
Confidence 7999999999998765 358999999999998764322110 0 00000 0011234678
Q ss_pred hHHHHHHHHHHHHH
Q 008324 305 VDMVVNAMIVAMVA 318 (570)
Q Consensus 305 VDdva~aii~a~~~ 318 (570)
++|+|++++.++..
T Consensus 237 pedvA~~v~fL~s~ 250 (272)
T 4dyv_A 237 VAHVASAVVYMASL 250 (272)
T ss_dssp HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCC
Confidence 99999999999874
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=2.1e-15 Score=150.54 Aligned_cols=232 Identities=12% Similarity=0.036 Sum_probs=150.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||++++++|++.| .+|+++.|+.... +.+. +.+..+.+ ..++.+
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~---~~~~---------~~l~~~~~-------~~~~~~ 63 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAG---AAVAFCARDGERL---RAAE---------SALRQRFP-------GARLFA 63 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHH---------HHHHHHST-------TCCEEE
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHH---------HHHHHhcC-------CceEEE
Confidence 679999999999999999999999999 6788888864321 1111 11222221 245889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|+++ .+..+.++ ..+|++||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 64 ~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 136 (265)
T 3lf2_A 64 SVCDVLD-------ALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESR 136 (265)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred EeCCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999995 33333333 368999999997532 2456778999999999999988652 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|++||....... +....|+
T Consensus 137 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 160 (265)
T 3lf2_A 137 ADAAIVCVNSLLASQPE--------------------------------------------------------PHMVATS 160 (265)
T ss_dssp TTEEEEEEEEGGGTSCC--------------------------------------------------------TTBHHHH
T ss_pred CCeEEEEECCcccCCCC--------------------------------------------------------CCchhhH
Confidence 35689999997543211 1235799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccc-cCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWV-EDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~-~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
.||+..+.+.+.. ..++++..++|+.|.++......... +................ ......+...+
T Consensus 161 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~p~~r~~~pe 233 (265)
T 3lf2_A 161 AARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNK-------QIPLGRLGKPI 233 (265)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHT-------TCTTCSCBCHH
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhcc-------CCCcCCCcCHH
Confidence 9999999988754 34799999999999775321100000 00000111111111000 00112356789
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++.+... --.|+++++.+|
T Consensus 234 dvA~~v~fL~s~~~~-~itG~~i~vdGG 260 (265)
T 3lf2_A 234 EAARAILFLASPLSA-YTTGSHIDVSGG 260 (265)
T ss_dssp HHHHHHHHHHSGGGT-TCCSEEEEESSS
T ss_pred HHHHHHHHHhCchhc-CcCCCEEEECCC
Confidence 999999998864332 223789999887
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.67 E-value=1.5e-15 Score=148.84 Aligned_cols=190 Identities=11% Similarity=0.095 Sum_probs=132.0
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+|+|+||||+|+||++++++|++.| .+|+++.|+... .+.+.+ +. ..++.++
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G---~~V~~~~r~~~~---~~~~~~-------------~~--------~~~~~~~ 54 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERG---HQVSMMGRRYQR---LQQQEL-------------LL--------GNAVIGI 54 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHH-------------HH--------GGGEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHH-------------Hh--------cCCceEE
Confidence 47899999999999999999999999 678999886422 111111 11 1358899
Q ss_pred eccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc--cCc
Q 008324 91 PGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--VKL 154 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~--~~l 154 (570)
.+|+++ .+..+.++ ..+|++||+||.... .+.++..+++|+.|+.++++.+... ++-
T Consensus 55 ~~D~~~-------~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~ 127 (235)
T 3l6e_A 55 VADLAH-------HEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG 127 (235)
T ss_dssp ECCTTS-------HHHHHHHHHHHHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ECCCCC-------HHHHHHHHHHHHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 999995 33333443 368999999997532 2456778999999999999988642 122
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||....... +....|+.|
T Consensus 128 ~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 151 (235)
T 3l6e_A 128 GVLANVLSSAAQVGK--------------------------------------------------------ANESLYCAS 151 (235)
T ss_dssp EEEEEECCEECCSSC--------------------------------------------------------SSHHHHHHH
T ss_pred CEEEEEeCHHhcCCC--------------------------------------------------------CCCcHHHHH
Confidence 389999997644321 112579999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHH
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..+.+.+.. ..++.+..++||.|-++...... . .....++..+|+|
T Consensus 152 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-------~--------------------~~~~~~~~pedvA 204 (235)
T 3l6e_A 152 KWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTD-------H--------------------VDPSGFMTPEDAA 204 (235)
T ss_dssp HHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC--------------------------------------CBCHHHHH
T ss_pred HHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccC-------C--------------------CCCcCCCCHHHHH
Confidence 99999988765 34799999999998765321100 0 0011467899999
Q ss_pred HHHHHHHH
Q 008324 310 NAMIVAMV 317 (570)
Q Consensus 310 ~aii~a~~ 317 (570)
++++.++.
T Consensus 205 ~~v~~l~~ 212 (235)
T 3l6e_A 205 AYMLDALE 212 (235)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHh
Confidence 99998874
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.67 E-value=1.9e-15 Score=155.73 Aligned_cols=226 Identities=15% Similarity=0.073 Sum_probs=147.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEE-cCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV-RAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lv-R~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
++||+||||||+|+||+++++.|++.| .+|+++. |+... .+.+.+ .++... ..++.
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G---~~Vv~~~~r~~~~---~~~~~~---------~l~~~~--------~~~~~ 100 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEG---YAVCLHYHRSAAE---ANALSA---------TLNARR--------PNSAI 100 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHH---HHHHHH---------HHHHHS--------TTCEE
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEcCCCHHH---HHHHHH---------HHHhhc--------CCeEE
Confidence 679999999999999999999999999 6788888 75421 122211 111111 25788
Q ss_pred EEeccCCCCCC-------C---CCchhhHHHHh-------CCccEEEEcCccCCc---------------------cccH
Q 008324 89 FVPGDISSEDL-------G---LKDSNLKEELW-------NELDIMVNSAAITKF---------------------DERY 130 (570)
Q Consensus 89 ~v~gDl~~~~l-------g---ls~~~~~~~l~-------~~vdiViH~AA~v~f---------------------~~~~ 130 (570)
++.+|+++++- | ..+....+.++ ..+|+|||+||.... .+.+
T Consensus 101 ~~~~Dl~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 180 (328)
T 2qhx_A 101 TVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETAT 180 (328)
T ss_dssp EEECCCSSSCBCC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHH
T ss_pred EEEeeCCCchhccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHH
Confidence 99999997530 0 00000222333 379999999997532 3345
Q ss_pred HHHHHHhHHHHHHHHHHHHHc---cC------ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhh
Q 008324 131 DVAFGINTLGVIHLVNFAKKC---VK------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELK 201 (570)
Q Consensus 131 ~~~~~~Nv~gt~~ll~la~~~---~~------l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~ 201 (570)
+..+++|+.|+.++++++... .+ ..++|++||...+...
T Consensus 181 ~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~-------------------------------- 228 (328)
T 2qhx_A 181 ADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL-------------------------------- 228 (328)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSCC--------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchhhccCC--------------------------------
Confidence 677899999999999987642 13 5789999997543211
Q ss_pred hcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccc
Q 008324 202 TKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKT 276 (570)
Q Consensus 202 ~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~ 276 (570)
.....|+.||+..+.+.+.+ ..++.+++++|+.|.++. +..
T Consensus 229 ------------------------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~--------- 274 (328)
T 2qhx_A 229 ------------------------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMP--------- 274 (328)
T ss_dssp ------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSC---------
T ss_pred ------------------------CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-ccc---------
Confidence 12357999999999988764 348999999999998765 211
Q ss_pred hHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 277 INTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 277 ~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
........... +.. .-+...+|+|++++.++..... .-.++++++.+|
T Consensus 275 -~~~~~~~~~~~----p~~----~r~~~pedvA~~v~~l~s~~~~-~itG~~i~vdGG 322 (328)
T 2qhx_A 275 -PAVWEGHRSKV----PLY----QRDSSAAEVSDVVIFLCSSKAK-YITGTCVKVDGG 322 (328)
T ss_dssp -HHHHHHHHTTC----TTT----TSCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred -HHHHHHHHhhC----CCC----CCCCCHHHHHHHHHHHhCcccc-CccCcEEEECCC
Confidence 11111222111 000 0246789999999998853322 223788988876
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.66 E-value=1.8e-15 Score=150.86 Aligned_cols=223 Identities=10% Similarity=0.034 Sum_probs=149.7
Q ss_pred cCCCEEEEECCc--chhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 10 LENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaT--GFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||+|+||||+ |+||++++++|++.| .+|+++.|+..... .+.++ + +.+.. ..++
T Consensus 18 l~~k~vlITGas~~~giG~~~a~~l~~~G---~~v~~~~~~~~~~~-~~~~~-~---------l~~~~--------~~~~ 75 (267)
T 3gdg_A 18 LKGKVVVVTGASGPKGMGIEAARGCAEMG---AAVAITYASRAQGA-EENVK-E---------LEKTY--------GIKA 75 (267)
T ss_dssp CTTCEEEETTCCSSSSHHHHHHHHHHHTS---CEEEECBSSSSSHH-HHHHH-H---------HHHHH--------CCCE
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCC---CeEEEEeCCcchhH-HHHHH-H---------HHHhc--------CCce
Confidence 689999999999 899999999999998 67788888764421 11111 1 11121 2678
Q ss_pred EEEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc--
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-- 151 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~-- 151 (570)
.++.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 76 ~~~~~Dl~~-------~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 148 (267)
T 3gdg_A 76 KAYKCQVDS-------YESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFK 148 (267)
T ss_dssp ECCBCCTTC-------HHHHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred eEEecCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 899999995 33333333 368999999997642 2456778999999999999988431
Q ss_pred -cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+..++|++||........ + .....
T Consensus 149 ~~~~g~iv~isS~~~~~~~~--------~----------------------------------------------~~~~~ 174 (267)
T 3gdg_A 149 ERGTGSLVITASMSGHIANF--------P----------------------------------------------QEQTS 174 (267)
T ss_dssp HHTCCEEEEECCGGGTSCCS--------S----------------------------------------------SCCHH
T ss_pred HcCCceEEEEccccccccCC--------C----------------------------------------------CCCCc
Confidence 2456899999875432110 0 12357
Q ss_pred HHHHHHHHHHHHHHh----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 231 YVFTKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
|+.||+..+.+++.+ ...+.+..+.|+.|..+.....+ .......... .....+..++
T Consensus 175 Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~---------~~~~r~~~~~ 236 (267)
T 3gdg_A 175 YNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVP---------KETQQLWHSM---------IPMGRDGLAK 236 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSC---------HHHHHHHHTT---------STTSSCEETH
T ss_pred chHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCC---------HHHHHHHHhc---------CCCCCCcCHH
Confidence 999999999988765 33489999999999876442211 1111112211 1123457789
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++.... ..-.++++++.+|
T Consensus 237 dva~~~~~l~s~~~-~~itG~~i~vdgG 263 (267)
T 3gdg_A 237 ELKGAYVYFASDAS-TYTTGADLLIDGG 263 (267)
T ss_dssp HHHHHHHHHHSTTC-TTCCSCEEEESTT
T ss_pred HHHhHhheeecCcc-ccccCCEEEECCc
Confidence 99999998885322 2223789999877
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=3.7e-15 Score=147.16 Aligned_cols=204 Identities=15% Similarity=0.191 Sum_probs=138.3
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.++||+++||||||+||++++++|++.| .+|+++.|+... .+.+.++ ++.. ..++.
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------l~~~---------~~~~~ 59 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEG---AAVAIAARRVEK---LRALGDE---------LTAA---------GAKVH 59 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHHT---------TCCEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHH---------HHhc---------CCcEE
Confidence 4689999999999999999999999998 678888886421 1222111 1111 25788
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~--- 151 (570)
++.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 60 ~~~~Dv~~-------~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 132 (247)
T 2jah_A 60 VLELDVAD-------RQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLR 132 (247)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 99999995 33333433 379999999997532 1346778999999999999988642
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+ .++|++||....... +....|
T Consensus 133 ~~-g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 155 (247)
T 2jah_A 133 SK-GTVVQMSSIAGRVNV--------------------------------------------------------RNAAVY 155 (247)
T ss_dssp HT-CEEEEECCGGGTCCC--------------------------------------------------------TTCHHH
T ss_pred CC-CEEEEEccHHhcCCC--------------------------------------------------------CCCcHH
Confidence 24 699999997543211 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.. ..++++++++|+.|.++.... +.. ......+... ++ ...++..+
T Consensus 156 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---~~~--~~~~~~~~~~--------~~----~~~~~~pe 218 (247)
T 2jah_A 156 QATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGH---ITH--TATKEMYEQR--------IS----QIRKLQAQ 218 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGG---CCC--HHHHHHHHHH--------TT----TSCCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhc---ccc--hhhHHHHHhc--------cc----ccCCCCHH
Confidence 99999888887654 458999999999998764321 100 0000111110 10 01147899
Q ss_pred HHHHHHHHHHH
Q 008324 307 MVVNAMIVAMV 317 (570)
Q Consensus 307 dva~aii~a~~ 317 (570)
|+|++++.++.
T Consensus 219 dvA~~v~~l~s 229 (247)
T 2jah_A 219 DIAEAVRYAVT 229 (247)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhC
Confidence 99999998886
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.66 E-value=2.6e-15 Score=151.52 Aligned_cols=214 Identities=15% Similarity=0.174 Sum_probs=143.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCccc----HHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS----AALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~----~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
++||+++||||+|+||++++++|++.| .+|+++.|+..... ..+...++ +... ..
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~---------~~ 65 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADG---ANVALVAKSAEPHPKLPGTIYTAAKE---------IEEA---------GG 65 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTT---CEEEEEESCCSCCSSSCCCHHHHHHH---------HHHH---------TS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECChhhhhhhhHHHHHHHHH---------HHhc---------CC
Confidence 679999999999999999999999998 68899999865321 11111111 1111 35
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 86 KITFVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
++.++.+|+++ .+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 66 ~~~~~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 138 (285)
T 3sc4_A 66 QALPIVGDIRD-------GDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPH 138 (285)
T ss_dssp EEEEEECCTTS-------HHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred cEEEEECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 78899999995 333334443 79999999997632 2446777899999999999988753
Q ss_pred -c--CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 008324 152 -V--KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (570)
Q Consensus 152 -~--~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
. +..++|++||........ ...
T Consensus 139 m~~~~~g~iv~isS~~~~~~~~-------------------------------------------------------~~~ 163 (285)
T 3sc4_A 139 MKGRDNPHILTLSPPIRLEPKW-------------------------------------------------------LRP 163 (285)
T ss_dssp TTTSSSCEEEECCCCCCCSGGG-------------------------------------------------------SCS
T ss_pred HHHcCCcEEEEECChhhccCCC-------------------------------------------------------CCC
Confidence 1 446899999975432110 123
Q ss_pred chHHHHHHHHHHHHHHh-----ccCCcEEEEecCc-eecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeee
Q 008324 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTV-VSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDV 302 (570)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsi-V~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
..|+.||+..+.+.+.. ..++++..++|+. +-.+. ........ .....+
T Consensus 164 ~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~-----------------~~~~~~~~--------~~~~r~ 218 (285)
T 3sc4_A 164 TPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAA-----------------VQNLLGGD--------EAMARS 218 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHH-----------------HHHHHTSC--------CCCTTC
T ss_pred chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHH-----------------HHhhcccc--------ccccCC
Confidence 67999999999988755 3579999999983 43211 11111111 111235
Q ss_pred eehHHHHHHHHHHHHHhhCCCCCCceEEecC
Q 008324 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGS 333 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyni~s 333 (570)
...+++|++++.++.... .-.++++.+.+
T Consensus 219 ~~pedvA~~~~~l~s~~~--~~tG~~i~~dg 247 (285)
T 3sc4_A 219 RKPEVYADAAYVVLNKPS--SYTGNTLLCED 247 (285)
T ss_dssp BCTHHHHHHHHHHHTSCT--TCCSCEEEHHH
T ss_pred CCHHHHHHHHHHHhCCcc--cccceEEEEcC
Confidence 678999999998885332 22245555443
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.6e-15 Score=152.79 Aligned_cols=226 Identities=14% Similarity=0.138 Sum_probs=145.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||++++++|++.| .+|+++.|+... .+.+. ++. ..++.+
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~ 55 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFVAEG---ARVAVLDKSAER---LRELE-------------VAH--------GGNAVG 55 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HHT--------BTTEEE
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCc---CEEEEEeCCHHH---HHHHH-------------HHc--------CCcEEE
Confidence 579999999999999999999999999 678888886422 11111 111 257889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCcc------------ccHHHHHHHhHHHHHHHHHHHHH
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKFD------------ERYDVAFGINTLGVIHLVNFAKK 150 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f~------------~~~~~~~~~Nv~gt~~ll~la~~ 150 (570)
+.+|+++ .+..+.++ ..+|++||+||..... +.++..+++|+.|+.++++.+..
T Consensus 56 ~~~Dv~~-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~ 128 (281)
T 3zv4_A 56 VVGDVRS-------LQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLP 128 (281)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EEcCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 9999995 33333333 3689999999975321 23677789999999999998865
Q ss_pred c--cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 008324 151 C--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (570)
Q Consensus 151 ~--~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
. ++-.++|++||....... ...
T Consensus 129 ~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~ 152 (281)
T 3zv4_A 129 ALVSSRGSVVFTISNAGFYPN--------------------------------------------------------GGG 152 (281)
T ss_dssp HHHHHTCEEEEECCGGGTSSS--------------------------------------------------------SSC
T ss_pred HHHhcCCeEEEEecchhccCC--------------------------------------------------------CCC
Confidence 2 122589999987543211 123
Q ss_pred chHHHHHHHHHHHHHHh----ccCCcEEEEecCceecCCCCCCCccccCcc-chHHHHHHHhcCCceeeecCCCeeeeee
Q 008324 229 NTYVFTKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLK-TINTLFVASAQGNLRCLVGETKVIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~lv~~~----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~-~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.. ..++.+..+.|+.|.++...+......... ............. ....+.
T Consensus 153 ~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~ 223 (281)
T 3zv4_A 153 PLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVL---------PIGRMP 223 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTC---------TTSSCC
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcC---------CCCCCC
Confidence 56999999999988765 345999999999998865432111000000 0000011111110 112356
Q ss_pred ehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
..+|+|++++.++.......-.++++++.+|
T Consensus 224 ~pedvA~~v~fL~s~~~~~~itG~~i~vdGG 254 (281)
T 3zv4_A 224 ALEEYTGAYVFFATRGDSLPATGALLNYDGG 254 (281)
T ss_dssp CGGGGSHHHHHHHSTTTSTTCSSCEEEESSS
T ss_pred CHHHHHHHHHHhhcccccccccCcEEEECCC
Confidence 7899999999888522222224789999887
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.65 E-value=4.2e-15 Score=149.95 Aligned_cols=198 Identities=15% Similarity=0.177 Sum_probs=135.6
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
..++||+|+||||||+||++++++|++.| .+|+++.|+.... +.+.+ .+++. + ..++
T Consensus 24 ~~~~~k~vlITGasggIG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~---------~~~~~-~-------~~~~ 80 (286)
T 1xu9_A 24 EMLQGKKVIVTGASKGIGREMAYHLAKMG---AHVVVTARSKETL---QKVVS---------HCLEL-G-------AASA 80 (286)
T ss_dssp GGGTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHH---------HHHHH-T-------CSEE
T ss_pred hhcCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHH---------HHHHh-C-------CCce
Confidence 45789999999999999999999999998 6789999864321 11111 11111 1 1368
Q ss_pred EEEeccCCCCCCCCCchhhHHHHh-------CCccEEEEc-CccCCc------cccHHHHHHHhHHHHHHHHHHHHHc--
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNS-AAITKF------DERYDVAFGINTLGVIHLVNFAKKC-- 151 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~-AA~v~f------~~~~~~~~~~Nv~gt~~ll~la~~~-- 151 (570)
.++.+|+++ .+..+.++ .++|+|||+ |+.... .+.++..+++|+.|+.++++++...
T Consensus 81 ~~~~~Dl~d-------~~~v~~~~~~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 153 (286)
T 1xu9_A 81 HYIAGTMED-------MTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLK 153 (286)
T ss_dssp EEEECCTTC-------HHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 899999995 33333333 379999999 454322 2345677999999999999988653
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
++..++|++||....... +....|
T Consensus 154 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 177 (286)
T 1xu9_A 154 QSNGSIVVVSSLAGKVAY--------------------------------------------------------PMVAAY 177 (286)
T ss_dssp HHTCEEEEEEEGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred HCCCEEEEECCcccccCC--------------------------------------------------------CCccHH
Confidence 133689999997543211 123579
Q ss_pred HHHHHHHHHHHHHh-------ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeee
Q 008324 232 VFTKTMGEMLMQQS-------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-------~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
+.||+..|.+++.+ ..++.+++++||.|.++.. .....+ ......++
T Consensus 178 ~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~-----------------~~~~~~---------~~~~~~~~ 231 (286)
T 1xu9_A 178 SASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETA-----------------MKAVSG---------IVHMQAAP 231 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHH-----------------HHHSCG---------GGGGGCBC
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhH-----------------HHhccc---------cccCCCCC
Confidence 99999999887653 2478999999998866321 000011 01124578
Q ss_pred hHHHHHHHHHHHH
Q 008324 305 VDMVVNAMIVAMV 317 (570)
Q Consensus 305 VDdva~aii~a~~ 317 (570)
.+++|++++.++.
T Consensus 232 ~~~vA~~i~~~~~ 244 (286)
T 1xu9_A 232 KEECALEIIKGGA 244 (286)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998875
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.65 E-value=2.5e-15 Score=151.82 Aligned_cols=224 Identities=15% Similarity=0.116 Sum_probs=145.5
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
-++||+++||||+|+||++++++|++.| .+|+++.|+... ..+.+.++ ++... ..++.
T Consensus 20 ~l~~k~~lVTGas~gIG~aia~~L~~~G---~~V~~~~r~~~~--~~~~~~~~---------l~~~~--------~~~~~ 77 (288)
T 2x9g_A 20 HMEAPAAVVTGAAKRIGRAIAVKLHQTG---YRVVIHYHNSAE--AAVSLADE---------LNKER--------SNTAV 77 (288)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHHT---CEEEEEESSCHH--HHHHHHHH---------HHHHS--------TTCEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CeEEEEeCCchH--HHHHHHHH---------HHhhc--------CCceE
Confidence 3689999999999999999999999999 678899887511 11122111 11111 25788
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCC---c-----c---------ccHHHHHHHhHHHHHHH
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK---F-----D---------ERYDVAFGINTLGVIHL 144 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~---f-----~---------~~~~~~~~~Nv~gt~~l 144 (570)
++.+|+++++. ..+..+.++ .++|+|||+||... + . +.++..+++|+.|+..+
T Consensus 78 ~~~~Dv~~~~~---~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l 154 (288)
T 2x9g_A 78 VCQADLTNSNV---LPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLL 154 (288)
T ss_dssp EEECCCSCSTT---HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHH
T ss_pred EEEeecCCccC---CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHH
Confidence 99999995210 033333333 37999999999753 1 1 23556789999999999
Q ss_pred HHHHHHc-c--C------ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHh
Q 008324 145 VNFAKKC-V--K------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMK 215 (570)
Q Consensus 145 l~la~~~-~--~------l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (570)
++.+... . + ..++|++||...+...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------------------------------- 188 (288)
T 2x9g_A 155 TMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPC---------------------------------------------- 188 (288)
T ss_dssp HHHHHHHC--------CCCEEEEEECCTTTTSCC----------------------------------------------
T ss_pred HHHHHHHHhhcCCCCCCCCeEEEEEecccccCCC----------------------------------------------
Confidence 9888653 1 2 4589999997543211
Q ss_pred hccccccccCCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCce
Q 008324 216 NLGTERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLR 290 (570)
Q Consensus 216 ~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~ 290 (570)
+....|+.||+..+.+.+.+ ..++++++++|+.|.++. .. .+ ..........
T Consensus 189 ----------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~----~~------~~~~~~~~~~-- 245 (288)
T 2x9g_A 189 ----------MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AM----GE------EEKDKWRRKV-- 245 (288)
T ss_dssp ----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TS----CH------HHHHHHHHTC--
T ss_pred ----------CCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-cc----Ch------HHHHHHHhhC--
Confidence 12357999999888887654 348999999999998875 21 00 1111111111
Q ss_pred eeecCCCeeeee-eehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 291 CLVGETKVIMDV-IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 291 ~~~~~~~~~~d~-VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+. ..+ ...+++|++++.++..... .-.++++++.+|
T Consensus 246 --p~-----~r~~~~pedvA~~v~~l~s~~~~-~itG~~i~vdGG 282 (288)
T 2x9g_A 246 --PL-----GRREASAEQIADAVIFLVSGSAQ-YITGSIIKVDGG 282 (288)
T ss_dssp --TT-----TSSCCCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred --CC-----CCCCCCHHHHHHHHHHHhCcccc-CccCCEEEECcc
Confidence 00 113 5789999999998864322 223788888776
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.64 E-value=4.5e-15 Score=144.12 Aligned_cols=201 Identities=10% Similarity=0.043 Sum_probs=139.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||++++++|++.| .+|+++.|+. +
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~l~~~G---~~V~~~~r~~-----------------------------------~---- 41 (223)
T 3uce_A 4 SDKTVYVVLGGTSGIGAELAKQLESEH---TIVHVASRQT-----------------------------------G---- 41 (223)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHCSTT---EEEEEESGGG-----------------------------------T----
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEecCCc-----------------------------------c----
Confidence 578999999999999999999999998 6778877742 1
Q ss_pred EeccCCCCCCCCCchhhHHHHh---CCccEEEEcCccCC-c-------cccHHHHHHHhHHHHHHHHHHHHHc-cCceEE
Q 008324 90 VPGDISSEDLGLKDSNLKEELW---NELDIMVNSAAITK-F-------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVF 157 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~---~~vdiViH~AA~v~-f-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~l~~~ 157 (570)
+|+++ .+..+.++ .++|++||+||... . .+.++..+++|+.|+.++++.+... ++-.++
T Consensus 42 --~D~~~-------~~~v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~i 112 (223)
T 3uce_A 42 --LDISD-------EKSVYHYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSI 112 (223)
T ss_dssp --CCTTC-------HHHHHHHHHHHCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEE
T ss_pred --cCCCC-------HHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEE
Confidence 78884 44344444 47999999999752 1 2446778999999999999998763 233489
Q ss_pred EEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHH
Q 008324 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (570)
Q Consensus 158 V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~ 237 (570)
|++||....... +....|+.||+.
T Consensus 113 v~~sS~~~~~~~--------------------------------------------------------~~~~~Y~asK~a 136 (223)
T 3uce_A 113 TLTSGMLSRKVV--------------------------------------------------------ANTYVKAAINAA 136 (223)
T ss_dssp EEECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHH
T ss_pred EEecchhhccCC--------------------------------------------------------CCchHHHHHHHH
Confidence 999987544321 123579999999
Q ss_pred HHHHHHHhc---cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHH
Q 008324 238 GEMLMQQSK---ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (570)
Q Consensus 238 aE~lv~~~~---~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~ 314 (570)
.|.+.+.+. ..+++..++|+.|.++.....+. ............+. ....+..++|+|++++.
T Consensus 137 ~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~-----~~~~~~~~~~~~~~---------~~~~~~~~~dvA~~~~~ 202 (223)
T 3uce_A 137 IEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNA-----DDRDAMYQRTQSHL---------PVGKVGEASDIAMAYLF 202 (223)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCH-----HHHHHHHHHHHHHS---------TTCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcch-----hhHHHHHHHHhhcC---------CCCCccCHHHHHHHHHH
Confidence 999887651 23999999999998865432211 00111111111111 11245789999999998
Q ss_pred HHHHhhCCCCCCceEEecCC
Q 008324 315 AMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 315 a~~~~~~~~~~~~iyni~s~ 334 (570)
++.. ..-.++++++.+|
T Consensus 203 l~~~---~~~tG~~i~vdgG 219 (223)
T 3uce_A 203 AIQN---SYMTGTVIDVDGG 219 (223)
T ss_dssp HHHC---TTCCSCEEEESTT
T ss_pred HccC---CCCCCcEEEecCC
Confidence 8862 2223789999887
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.64 E-value=4e-15 Score=147.23 Aligned_cols=198 Identities=13% Similarity=0.108 Sum_probs=135.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||++++++|++.| .+|+++.|+.... +.+.+ .+.+..+. ..++.+
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~---~~~~~---------~~~~~~~~------~~~~~~ 63 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDG---YRVVLIARSKQNL---EKVHD---------EIMRSNKH------VQEPIV 63 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHT---CEEEEEESCHHHH---HHHHH---------HHHHHCTT------SCCCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHH---------HHHHhccc------cCcceE
Confidence 678999999999999999999999999 6788888865321 22221 11221110 157889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc---c---ccHHHHHHHhHHHHHHHHHHHHHc---cC
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF---D---ERYDVAFGINTLGVIHLVNFAKKC---VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f---~---~~~~~~~~~Nv~gt~~ll~la~~~---~~ 153 (570)
+.+|+++ .+..+.++ ..+|++||+||.... + +.++..+++|+.|+.++++.+... .+
T Consensus 64 ~~~Dv~~-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~ 136 (250)
T 3nyw_A 64 LPLDITD-------CTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK 136 (250)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EeccCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999995 33333433 369999999997532 1 446778999999999999988531 25
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||....... .....|+.
T Consensus 137 ~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 160 (250)
T 3nyw_A 137 NGYIFNVASRAAKYGF--------------------------------------------------------ADGGIYGS 160 (250)
T ss_dssp CEEEEEECC---------------------------------------------------------------CCTTHHHH
T ss_pred CeEEEEEccHHhcCCC--------------------------------------------------------CCCcchHH
Confidence 5789999997543210 11357999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHH
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..+.+.+.. ..++++..++|+.|.++..+ .... ......+++.+|+
T Consensus 161 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~-----------------~~~~---------~~~~~~~~~p~dv 214 (250)
T 3nyw_A 161 TKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAK-----------------KAGT---------PFKDEEMIQPDDL 214 (250)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHH-----------------HTTC---------CSCGGGSBCHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhh-----------------hcCC---------CcccccCCCHHHH
Confidence 999999888754 34799999999988664211 0000 0112246889999
Q ss_pred HHHHHHHHH
Q 008324 309 VNAMIVAMV 317 (570)
Q Consensus 309 a~aii~a~~ 317 (570)
|++++.++.
T Consensus 215 a~~v~~l~s 223 (250)
T 3nyw_A 215 LNTIRCLLN 223 (250)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHc
Confidence 999998885
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.64 E-value=7.3e-15 Score=149.20 Aligned_cols=211 Identities=18% Similarity=0.187 Sum_probs=124.7
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
....+||+|+||||+|+||++++++|++.| .+|++..|+.... +... +.+++.. ..+
T Consensus 7 ~~~~~~k~vlITGas~GIG~~~a~~L~~~G---~~V~~~~r~~~~~---~~~~---------~~l~~~~--------~~~ 63 (311)
T 3o26_A 7 NTVTKRRCAVVTGGNKGIGFEICKQLSSNG---IMVVLTCRDVTKG---HEAV---------EKLKNSN--------HEN 63 (311)
T ss_dssp -----CCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHH---------HHHHTTT--------CCS
T ss_pred CccCCCcEEEEecCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHH---------HHHHhcC--------CCc
Confidence 345789999999999999999999999998 6889999975321 1111 1122111 257
Q ss_pred eEEEeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc---------------------------------
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF--------------------------------- 126 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f--------------------------------- 126 (570)
+.++.+|++++ .+..+.+ ...+|+|||+||....
T Consensus 64 ~~~~~~Dl~~~------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (311)
T 3o26_A 64 VVFHQLDVTDP------IATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQEL 137 (311)
T ss_dssp EEEEECCTTSC------HHHHHHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTT
T ss_pred eEEEEccCCCc------HHHHHHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcc
Confidence 89999999953 0222222 3479999999997632
Q ss_pred ----cccHHHHHHHhHHHHHHHHHHHHHc---cCceEEEEEecceeecCCC-cccccccCCCCCCCChHHHHHHHHHHHH
Q 008324 127 ----DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHVSTAYVAGERT-GLILENPLDGASGLDFDAEMKVIDQKLN 198 (570)
Q Consensus 127 ----~~~~~~~~~~Nv~gt~~ll~la~~~---~~l~~~V~vSTa~v~~~~~-g~i~E~~~~~~~~~d~~~~~~~~~~~~~ 198 (570)
.+.++..+++|+.|+.++++++... .+..++|++||........ ....+..+....................
T Consensus 138 ~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (311)
T 3o26_A 138 MSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLK 217 (311)
T ss_dssp EECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHH
T ss_pred cccchhhhhhheeeeeehHHHHHHHhhHhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHh
Confidence 1334566899999999998887642 2456899999976543211 0000000000011111111111111111
Q ss_pred hhhhcCCChhHHHHHHhhccccccccCCCC---chHHHHHHHHHHHHHHh---ccCCcEEEEecCceecCC
Q 008324 199 ELKTKGAPQKEITLFMKNLGTERAKLHGWP---NTYVFTKTMGEMLMQQS---KENLSLVIIRPTVVSGTY 263 (570)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~---n~Y~~sK~~aE~lv~~~---~~~lp~~IvRPsiV~g~~ 263 (570)
.... ......+++ ..|+.||+..+.+.+.+ ..++.+..+.||.|.++.
T Consensus 218 ~~~~-----------------~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~e~~~i~v~~v~PG~v~T~~ 271 (311)
T 3o26_A 218 DFKE-----------------NLIETNGWPSFGAAYTTSKACLNAYTRVLANKIPKFQVNCVCPGLVKTEM 271 (311)
T ss_dssp HHHT-----------------TCTTTTTCCSSCHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCSBCSGG
T ss_pred hhhc-----------------cccccccCcccchhhHHHHHHHHHHHHHHHhhcCCceEEEecCCceecCC
Confidence 1100 000011232 57999999999998866 246899999999987653
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.64 E-value=2.3e-15 Score=148.18 Aligned_cols=213 Identities=14% Similarity=0.114 Sum_probs=140.9
Q ss_pred HHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 008324 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
-.+.++||+|+||||+|+||++++++|++.| .+|+++.|+.... +.+.+ .+++.. ..
T Consensus 8 ~~~~l~~k~vlITGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~---------~~~~~~--------~~ 64 (247)
T 3i1j_A 8 HPELLKGRVILVTGAARGIGAAAARAYAAHG---ASVVLLGRTEASL---AEVSD---------QIKSAG--------QP 64 (247)
T ss_dssp CTTTTTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHH---------HHHHTT--------SC
T ss_pred CCccCCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEecCHHHH---HHHHH---------HHHhcC--------CC
Confidence 3456889999999999999999999999999 6788998874321 12111 111111 24
Q ss_pred ceEEEeccC--CCCCCCCCchhhHHHHh-------CCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHH
Q 008324 86 KITFVPGDI--SSEDLGLKDSNLKEELW-------NELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFA 148 (570)
Q Consensus 86 kv~~v~gDl--~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~----f----~~~~~~~~~~Nv~gt~~ll~la 148 (570)
++.++.+|+ + +.+..+.++ ..+|+|||+||... + .+.++..+++|+.|+.++++.+
T Consensus 65 ~~~~~~~d~d~~-------~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 137 (247)
T 3i1j_A 65 QPLIIALNLENA-------TAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRAL 137 (247)
T ss_dssp CCEEEECCTTTC-------CHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CceEEEeccccC-------CHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 566777777 5 333333333 37999999999752 1 2456778999999999999988
Q ss_pred HHc---cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccC
Q 008324 149 KKC---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLH 225 (570)
Q Consensus 149 ~~~---~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 225 (570)
... .+..++|++||.......
T Consensus 138 ~~~~~~~~~~~iv~isS~~~~~~~-------------------------------------------------------- 161 (247)
T 3i1j_A 138 LPLLKRSEDASIAFTSSSVGRKGR-------------------------------------------------------- 161 (247)
T ss_dssp HHHHTTSSSEEEEEECCGGGTSCC--------------------------------------------------------
T ss_pred HHHHHhCCCCeEEEEcchhhcCCC--------------------------------------------------------
Confidence 532 245789999987543211
Q ss_pred CCCchHHHHHHHHHHHHHHh-----c-cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCee
Q 008324 226 GWPNTYVFTKTMGEMLMQQS-----K-ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVI 299 (570)
Q Consensus 226 ~~~n~Y~~sK~~aE~lv~~~-----~-~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~ 299 (570)
.....|+.||+..+.+++.+ . .++++..++|+.|.++.. ...... ...
T Consensus 162 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~-----------------~~~~~~---------~~~ 215 (247)
T 3i1j_A 162 ANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMR-----------------AQAYPD---------ENP 215 (247)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHH-----------------HHHSTT---------SCG
T ss_pred CCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccc-----------------hhcccc---------cCc
Confidence 12357999999999988754 2 578999999998865321 011000 011
Q ss_pred eeeeehHHHHHHHHHHHHHhhCCCCCCceEEe
Q 008324 300 MDVIPVDMVVNAMIVAMVAHAKQPSDANIYHV 331 (570)
Q Consensus 300 ~d~VpVDdva~aii~a~~~~~~~~~~~~iyni 331 (570)
......+|+|++++.++.....- -.|+++++
T Consensus 216 ~~~~~p~dva~~~~~l~s~~~~~-itG~~i~~ 246 (247)
T 3i1j_A 216 LNNPAPEDIMPVYLYLMGPDSTG-INGQALNA 246 (247)
T ss_dssp GGSCCGGGGTHHHHHHHSGGGTT-CCSCEEEC
T ss_pred cCCCCHHHHHHHHHHHhCchhcc-ccCeeecC
Confidence 23456799999999887533222 22556554
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.64 E-value=4.7e-15 Score=148.05 Aligned_cols=203 Identities=13% Similarity=0.166 Sum_probs=133.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+.||+++||||+|+||++++++|++.| .+|+++.|+.... +.+.++ ++.. ..++.+
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~---~~~~~~---------l~~~---------~~~~~~ 57 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAG---AKILLGARRQARI---EAIATE---------IRDA---------GGTALA 57 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSHHHH---HHHHHH---------HHHT---------TCEEEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHH---------HHhc---------CCcEEE
Confidence 468999999999999999999999999 6788888874321 222211 1111 257889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|+++ .+..+.++ ..+|++||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 58 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 130 (264)
T 3tfo_A 58 QVLDVTD-------RHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQ 130 (264)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 9999995 33333433 379999999997642 2456778999999999998877542 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... +....|+
T Consensus 131 ~~g~IV~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 154 (264)
T 3tfo_A 131 RSGQIINIGSIGALSVV--------------------------------------------------------PTAAVYC 154 (264)
T ss_dssp TCEEEEEECCGGGTCCC--------------------------------------------------------TTCHHHH
T ss_pred CCeEEEEEcCHHHcccC--------------------------------------------------------CCChhHH
Confidence 55789999997544221 1235799
Q ss_pred HHHHHHHHHHHHh---ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHH
Q 008324 233 FTKTMGEMLMQQS---KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (570)
Q Consensus 233 ~sK~~aE~lv~~~---~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
.||+..+.+.+.. ..++++..++||.|.++....... . . . . ..... ........+|+|
T Consensus 155 asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~---~-~---~-~-----~~~~~------~~~~~~~pedvA 215 (264)
T 3tfo_A 155 ATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITH---E-E---T-M-----AAMDT------YRAIALQPADIA 215 (264)
T ss_dssp HHHHHHHHHHHHHHHHCSSEEEEEEEECCC------------------------------------------CCCHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccc---h-h---H-H-----HHHHh------hhccCCCHHHHH
Confidence 9999999888755 248999999999988754321100 0 0 0 0 00000 001136799999
Q ss_pred HHHHHHHHH
Q 008324 310 NAMIVAMVA 318 (570)
Q Consensus 310 ~aii~a~~~ 318 (570)
++++.++..
T Consensus 216 ~~v~~l~s~ 224 (264)
T 3tfo_A 216 RAVRQVIEA 224 (264)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHhcC
Confidence 999998863
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.64 E-value=4.8e-15 Score=147.62 Aligned_cols=167 Identities=14% Similarity=0.150 Sum_probs=120.8
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
-++||+++||||+|+||++++++|++.| .+|+++.|+... .+.+.++ +++. ..++.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~ 59 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEG---TAIALLDMNREA---LEKAEAS---------VREK---------GVEAR 59 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHTT---------TSCEE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHhc---------CCcEE
Confidence 3689999999999999999999999998 678888886422 1121111 1110 24688
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccC-C---c----cccHHHHHHHhHHHHHHHHHHHHHc--
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAIT-K---F----DERYDVAFGINTLGVIHLVNFAKKC-- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v-~---f----~~~~~~~~~~Nv~gt~~ll~la~~~-- 151 (570)
++.+|+++ .+..+.++ .++|+|||+||.. . + .+.++..+++|+.|+.++++.+...
T Consensus 60 ~~~~D~~~-------~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 132 (262)
T 1zem_A 60 SYVCDVTS-------EEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMI 132 (262)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEEecCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 99999995 33333333 3799999999975 2 1 2346778999999999999988653
Q ss_pred -cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+..++|++||....... +....
T Consensus 133 ~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 156 (262)
T 1zem_A 133 TQNYGRIVNTASMAGVKGP--------------------------------------------------------PNMAA 156 (262)
T ss_dssp HHTCEEEEEECCHHHHSCC--------------------------------------------------------TTBHH
T ss_pred hcCCcEEEEEcchhhccCC--------------------------------------------------------CCCch
Confidence 245799999997544321 11357
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecC
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGT 262 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
|+.||+..+.+.+.. ..++++.+++|+.|.++
T Consensus 157 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 193 (262)
T 1zem_A 157 YGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG 193 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcc
Confidence 999998888877654 45899999999988764
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=5.2e-15 Score=160.28 Aligned_cols=224 Identities=20% Similarity=0.146 Sum_probs=151.8
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+-.+++||||||||+||.+++++|++.|. .+|+++.|+.......+++.+++ .. ...++.
T Consensus 223 ~~~~~~vLITGgtGgIG~~la~~La~~G~--~~vvl~~R~~~~~~~~~~l~~~l---------~~---------~g~~v~ 282 (486)
T 2fr1_A 223 WKPTGTVLVTGGTGGVGGQIARWLARRGA--PHLLLVSRSGPDADGAGELVAEL---------EA---------LGARTT 282 (486)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHHTC--SEEEEEESSGGGSTTHHHHHHHH---------HH---------TTCEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHcCC--CEEEEEcCCCCCcHHHHHHHHHH---------Hh---------cCCEEE
Confidence 45689999999999999999999999984 35889999764332222222111 11 125788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhCC------ccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHccCce
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWNE------LDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKCVKLK 155 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~------vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~~~l~ 155 (570)
++.+|++ +.+..+.++++ +|+|||+||.... .+.++..+++|+.|+.++.++++.. ++.
T Consensus 283 ~~~~Dv~-------d~~~v~~~~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~~~ 354 (486)
T 2fr1_A 283 VAACDVT-------DRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DLT 354 (486)
T ss_dssp EEECCTT-------CHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CCS
T ss_pred EEEeCCC-------CHHHHHHHHHHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC-CCC
Confidence 9999999 44445566654 5999999997643 2345677889999999999999886 789
Q ss_pred EEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHH
Q 008324 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (570)
Q Consensus 156 ~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
+||++||........ ....|+.+|
T Consensus 355 ~~V~~SS~a~~~g~~--------------------------------------------------------g~~~Yaaak 378 (486)
T 2fr1_A 355 AFVLFSSFASAFGAP--------------------------------------------------------GLGGYAPGN 378 (486)
T ss_dssp EEEEEEEHHHHTCCT--------------------------------------------------------TCTTTHHHH
T ss_pred EEEEEcChHhcCCCC--------------------------------------------------------CCHHHHHHH
Confidence 999999975432111 135699999
Q ss_pred HHHHHHHHHh-ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHH
Q 008324 236 TMGEMLMQQS-KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (570)
Q Consensus 236 ~~aE~lv~~~-~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~ 314 (570)
+..+.+..+. ..++++++++|+.+.+... ... .. .. .+ .......++.+++++++..
T Consensus 379 a~l~~la~~~~~~gi~v~~i~pG~~~~~gm------~~~------~~----~~---~~---~~~g~~~i~~e~~a~~l~~ 436 (486)
T 2fr1_A 379 AYLDGLAQQRRSDGLPATAVAWGTWAGSGM------AEG------PV----AD---RF---RRHGVIEMPPETACRALQN 436 (486)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEECCBC-------------------------------C---TTTTEECBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEEECCeeCCCcc------cch------hH----HH---HH---HhcCCCCCCHHHHHHHHHH
Confidence 9999987765 5689999999998876421 010 00 00 00 0112457899999999999
Q ss_pred HHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHh
Q 008324 315 AMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGF 349 (570)
Q Consensus 315 a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~ 349 (570)
++.... . .+.+ -++.|..+.....
T Consensus 437 ~l~~~~-----~-~~~v-----~~~d~~~~~~~~~ 460 (486)
T 2fr1_A 437 ALDRAE-----V-CPIV-----IDVRWDRFLLAYT 460 (486)
T ss_dssp HHHTTC-----S-SCEE-----CEECHHHHHHHHT
T ss_pred HHhCCC-----C-eEEE-----EeCCHHHHhhhhc
Confidence 886221 1 1222 2367888766543
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.63 E-value=2.6e-15 Score=146.40 Aligned_cols=189 Identities=15% Similarity=0.146 Sum_probs=129.1
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+||||+|+||++++++|++.| .+|+++.|+.... +.+. ++ ...++.++.+
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G---~~V~~~~r~~~~~---~~~~-------------~~--------~~~~~~~~~~ 54 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEG---KATYLTGRSESKL---STVT-------------NC--------LSNNVGYRAR 54 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTT---CCEEEEESCHHHH---HHHH-------------HT--------CSSCCCEEEC
T ss_pred CEEEEecCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHH-------------HH--------HhhccCeEee
Confidence 679999999999999999999999 5688888864221 1111 11 1357789999
Q ss_pred cCCCCCCCCCchhhHHHHhCCc----cEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc-c-CceEEEE
Q 008324 93 DISSEDLGLKDSNLKEELWNEL----DIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-V-KLKVFVH 159 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~v----diViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~-~-~l~~~V~ 159 (570)
|+++ .+..+.+++++ |+|||+||.... .+.++..+++|+.|+.++++.+... . +-.++|+
T Consensus 55 D~~~-------~~~v~~~~~~~~~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~ 127 (230)
T 3guy_A 55 DLAS-------HQEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVM 127 (230)
T ss_dssp CTTC-------HHHHHHHHHSCSSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEE
T ss_pred cCCC-------HHHHHHHHHHHhhcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 9994 44455666553 899999997532 2446778999999999999988653 1 2238999
Q ss_pred EecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHH
Q 008324 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (570)
Q Consensus 160 vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE 239 (570)
+||....... .....|+.||+..+
T Consensus 128 isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa~~ 151 (230)
T 3guy_A 128 IMSTAAQQPK--------------------------------------------------------AQESTYCAVKWAVK 151 (230)
T ss_dssp ECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHHHH
T ss_pred EeecccCCCC--------------------------------------------------------CCCchhHHHHHHHH
Confidence 9987544221 12357999999999
Q ss_pred HHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHH
Q 008324 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (570)
Q Consensus 240 ~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~ 314 (570)
.+.+.. ..++++..++||.|.++...... .......+.+++|+|++++.
T Consensus 152 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------------------------~~~~~~~~~~~~dvA~~i~~ 205 (230)
T 3guy_A 152 GLIESVRLELKGKPMKIIAVYPGGMATEFWETSG--------------------------KSLDTSSFMSAEDAALMIHG 205 (230)
T ss_dssp HHHHHHHHHTTTSSCEEEEEEECCC------------------------------------------CCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCeEEEEEECCcccChHHHhcC--------------------------CCCCcccCCCHHHHHHHHHH
Confidence 988765 34799999999998775331100 00112356889999999988
Q ss_pred HHH
Q 008324 315 AMV 317 (570)
Q Consensus 315 a~~ 317 (570)
++.
T Consensus 206 l~~ 208 (230)
T 3guy_A 206 ALA 208 (230)
T ss_dssp HCC
T ss_pred HHh
Confidence 764
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=9.1e-15 Score=148.00 Aligned_cols=226 Identities=15% Similarity=0.094 Sum_probs=146.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEE-cCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV-RAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lv-R~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
++||+++||||+|+||++++++|++.| .+|+++. |+... .+.+. +.++... ..++.
T Consensus 7 l~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~~r~~~~---~~~~~---------~~l~~~~--------~~~~~ 63 (291)
T 1e7w_A 7 PTVPVALVTGAAKRLGRSIAEGLHAEG---YAVCLHYHRSAAE---ANALS---------ATLNARR--------PNSAI 63 (291)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHH---HHHHH---------HHHHHHS--------TTCEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEcCCCHHH---HHHHH---------HHHhhhc--------CCeeE
Confidence 679999999999999999999999998 6788888 76421 11221 1121111 25788
Q ss_pred EEeccCCCCCC-------CCCc---hhhHHHHh-------CCccEEEEcCccCCc---------------------cccH
Q 008324 89 FVPGDISSEDL-------GLKD---SNLKEELW-------NELDIMVNSAAITKF---------------------DERY 130 (570)
Q Consensus 89 ~v~gDl~~~~l-------gls~---~~~~~~l~-------~~vdiViH~AA~v~f---------------------~~~~ 130 (570)
++.+|+++++. |... .+..+.++ ..+|++||+||.... .+.+
T Consensus 64 ~~~~Dl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (291)
T 1e7w_A 64 TVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETAT 143 (291)
T ss_dssp EEECCCSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHH
T ss_pred EEEeecCCcccccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHH
Confidence 99999997640 0000 00222332 379999999997532 2345
Q ss_pred HHHHHHhHHHHHHHHHHHHHc-c--C------ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhh
Q 008324 131 DVAFGINTLGVIHLVNFAKKC-V--K------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELK 201 (570)
Q Consensus 131 ~~~~~~Nv~gt~~ll~la~~~-~--~------l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~ 201 (570)
+..+++|+.|+.++++++... . + ..++|++||...+...
T Consensus 144 ~~~~~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~-------------------------------- 191 (291)
T 1e7w_A 144 ADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL-------------------------------- 191 (291)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCC--------------------------------
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCCC--------------------------------
Confidence 677899999999999988642 1 2 4789999997543211
Q ss_pred hcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccc
Q 008324 202 TKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKT 276 (570)
Q Consensus 202 ~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~ 276 (570)
+....|+.||+..+.+.+.. ..++.+..++|+.|..+. + .+
T Consensus 192 ------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-~~-------- 237 (291)
T 1e7w_A 192 ------------------------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-MP-------- 237 (291)
T ss_dssp ------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-SC--------
T ss_pred ------------------------CCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-CC--------
Confidence 12357999999999988754 357999999999987654 2 11
Q ss_pred hHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 277 INTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 277 ~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
........... +.. .-+...+++|++++.++..... .-.++++++.+|
T Consensus 238 -~~~~~~~~~~~----p~~----~r~~~pedvA~~v~~l~s~~~~-~itG~~i~vdGG 285 (291)
T 1e7w_A 238 -PAVWEGHRSKV----PLY----QRDSSAAEVSDVVIFLCSSKAK-YITGTCVKVDGG 285 (291)
T ss_dssp -HHHHHHHHTTC----TTT----TSCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred -HHHHHHHHhhC----CCC----CCCCCHHHHHHHHHHHhCCccc-CccCcEEEECCC
Confidence 11111111111 000 0246789999999988853322 223778888776
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.62 E-value=9.6e-15 Score=147.13 Aligned_cols=204 Identities=14% Similarity=0.104 Sum_probs=133.5
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.++||+++||||+|+||++++++|++.| .+|+++.|+.... +.+.++ +.+.. ...+.
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~---~~~~~~---------~~~~~--------~~~~~ 86 (281)
T 4dry_A 30 SGEGRIALVTGGGTGVGRGIAQALSAEG---YSVVITGRRPDVL---DAAAGE---------IGGRT--------GNIVR 86 (281)
T ss_dssp ----CEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHH---------HHHHH--------SSCEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHH---------HHhcC--------CCeEE
Confidence 3679999999999999999999999999 6788888865321 111111 11111 13468
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHHc-c
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC-V 152 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f--------~~~~~~~~~~Nv~gt~~ll~la~~~-~ 152 (570)
++.+|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++.+.+... .
T Consensus 87 ~~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~ 159 (281)
T 4dry_A 87 AVVCDVGD-------PDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMK 159 (281)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 89999995 33333433 368999999997532 2456778999999999988877642 1
Q ss_pred --C--ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 008324 153 --K--LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (570)
Q Consensus 153 --~--l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
+ -.++|++||....... ...
T Consensus 160 ~~~~~~g~IV~isS~~~~~~~--------------------------------------------------------~~~ 183 (281)
T 4dry_A 160 AQTPRGGRIINNGSISAQTPR--------------------------------------------------------PNS 183 (281)
T ss_dssp HSSSCCEEEEEECCGGGTCCC--------------------------------------------------------TTC
T ss_pred hcCCCCcEEEEECCHHhCCCC--------------------------------------------------------CCC
Confidence 1 4689999997543211 123
Q ss_pred chHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeee
Q 008324 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.. ..++++..++|+.|.++..+..+. ... .. ........++
T Consensus 184 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~---~~~-----------~~-----~~~~~~~~~~ 244 (281)
T 4dry_A 184 APYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMST---GVL-----------QA-----NGEVAAEPTI 244 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------C---EEE-----------CT-----TSCEEECCCB
T ss_pred hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcc---hhh-----------hh-----hhcccccCCC
Confidence 57999999999988765 358999999999998754322110 000 00 0001122367
Q ss_pred ehHHHHHHHHHHHH
Q 008324 304 PVDMVVNAMIVAMV 317 (570)
Q Consensus 304 pVDdva~aii~a~~ 317 (570)
+.+|+|++++.++.
T Consensus 245 ~pedvA~~v~fL~s 258 (281)
T 4dry_A 245 PIEHIAEAVVYMAS 258 (281)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhC
Confidence 89999999999886
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=6e-15 Score=145.79 Aligned_cols=159 Identities=16% Similarity=0.222 Sum_probs=117.8
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+++||||+|+||++++++|++.| .+|+++.|+... .+.+.++ . ..++.++.+
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~---~~~~~~~-------------~--------~~~~~~~~~ 53 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQG---HKVIATGRRQER---LQELKDE-------------L--------GDNLYIAQL 53 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH-------------H--------CTTEEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH-------------h--------cCceEEEEc
Confidence 689999999999999999999998 678888886421 1111111 1 246889999
Q ss_pred cCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHH-c--cCc
Q 008324 93 DISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKK-C--VKL 154 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~----f----~~~~~~~~~~Nv~gt~~ll~la~~-~--~~l 154 (570)
|+++ .+..+.+++ ++|++||+||... + .+.++..+++|+.|+.++++.+.. + .+.
T Consensus 54 Dv~~-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~ 126 (248)
T 3asu_A 54 DVRN-------RAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNH 126 (248)
T ss_dssp CTTC-------HHHHHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CCCC-------HHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 9994 444445543 6899999999752 2 244677899999999999888763 1 256
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||....... +....|+.|
T Consensus 127 g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 150 (248)
T 3asu_A 127 GHIINIGSTAGSWPY--------------------------------------------------------AGGNVYGAT 150 (248)
T ss_dssp CEEEEECCGGGTSCC--------------------------------------------------------TTCHHHHHH
T ss_pred ceEEEEccchhccCC--------------------------------------------------------CCCchHHHH
Confidence 799999997543211 123579999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceec
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSG 261 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g 261 (570)
|+..+.+.+.. ..++++.+++|+.|.|
T Consensus 151 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~g 182 (248)
T 3asu_A 151 KAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGG 182 (248)
T ss_dssp HHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEecccccc
Confidence 99999998764 3479999999999984
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.9e-14 Score=144.27 Aligned_cols=199 Identities=12% Similarity=0.118 Sum_probs=135.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCccc----HHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS----AALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~----~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
++||+++||||+|+||++++++|++.| .+|+++.|+..... ..+...++ ++.. ..
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~---------~~ 62 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDG---ANVAIAAKSAVANPKLPGTIHSAAAA---------VNAA---------GG 62 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCCSCCTTSCCCHHHHHHH---------HHHH---------TS
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCC---CEEEEEeccchhhhhhHHHHHHHHHH---------HHhc---------CC
Confidence 579999999999999999999999999 68899999865321 11111111 1111 36
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-
Q 008324 86 KITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK- 150 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~- 150 (570)
++.++.+|+++ .+..+.++ ..+|++||+||.... .+.++..+++|+.|+.++.+.+..
T Consensus 63 ~~~~~~~Dv~~-------~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 135 (274)
T 3e03_A 63 QGLALKCDIRE-------EDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPH 135 (274)
T ss_dssp EEEEEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred eEEEEeCCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHH
Confidence 78899999995 33333433 379999999997532 244677899999999999998865
Q ss_pred c--cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 008324 151 C--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (570)
Q Consensus 151 ~--~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
+ .+-.++|++||........ + +..
T Consensus 136 m~~~~~g~iv~isS~~~~~~~~-------~-----------------------------------------------~~~ 161 (274)
T 3e03_A 136 LLQAPNPHILTLAPPPSLNPAW-------W-----------------------------------------------GAH 161 (274)
T ss_dssp HTTSSSCEEEECCCCCCCCHHH-------H-----------------------------------------------HHC
T ss_pred HHhcCCceEEEECChHhcCCCC-------C-----------------------------------------------CCC
Confidence 2 2456899999875432100 0 113
Q ss_pred chHHHHHHHHHHHHHHh-----ccCCcEEEEecCc-eecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeee
Q 008324 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTV-VSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDV 302 (570)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsi-V~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
..|+.||+..+.+.+.. ..++.+..+.|+. |-.+.... ..+ .....+
T Consensus 162 ~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~------------------~~~---------~~~~~~ 214 (274)
T 3e03_A 162 TGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINM------------------LPG---------VDAAAC 214 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------------------------C---------CCGGGS
T ss_pred chHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhh------------------ccc---------cccccc
Confidence 57999999999888754 4579999999984 43321100 000 011125
Q ss_pred eehHHHHHHHHHHHH
Q 008324 303 IPVDMVVNAMIVAMV 317 (570)
Q Consensus 303 VpVDdva~aii~a~~ 317 (570)
...+++|++++.++.
T Consensus 215 ~~pedvA~~v~~l~s 229 (274)
T 3e03_A 215 RRPEIMADAAHAVLT 229 (274)
T ss_dssp BCTHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhC
Confidence 678999999999885
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.7e-14 Score=149.64 Aligned_cols=212 Identities=16% Similarity=0.162 Sum_probs=142.4
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccH----HHHHHHHHhhhhhHHHHHhhhccccccccC
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA----ALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~----~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
-++||+||||||+|+||++++++|++.| .+|+++.|+...... .+...+++ +. ..
T Consensus 42 ~l~gk~vlVTGas~GIG~aia~~La~~G---a~Vvl~~r~~~~~~~l~~~l~~~~~~~---------~~---------~g 100 (346)
T 3kvo_A 42 RLAGCTVFITGASRGIGKAIALKAAKDG---ANIVIAAKTAQPHPKLLGTIYTAAEEI---------EA---------VG 100 (346)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTT---CEEEEEESCCSCCSSSCCCHHHHHHHH---------HH---------TT
T ss_pred CCCCCEEEEeCCChHHHHHHHHHHHHCC---CEEEEEECChhhhhhhHHHHHHHHHHH---------Hh---------cC
Confidence 4789999999999999999999999998 678999998754211 11111111 11 13
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH
Q 008324 85 EKITFVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK 150 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~ 150 (570)
.++.++.+|+++ ++..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++..
T Consensus 101 ~~~~~~~~Dv~d-------~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp 173 (346)
T 3kvo_A 101 GKALPCIVDVRD-------EQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIP 173 (346)
T ss_dssp CEEEEEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeEEEEEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 578899999995 443344443 79999999997542 245677899999999999999864
Q ss_pred c---cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCC
Q 008324 151 C---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (570)
Q Consensus 151 ~---~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 227 (570)
. .+..++|++||........ + ..
T Consensus 174 ~m~~~~~g~IV~iSS~~~~~~~~-------~-----------------------------------------------~~ 199 (346)
T 3kvo_A 174 YLKKSKVAHILNISPPLNLNPVW-------F-----------------------------------------------KQ 199 (346)
T ss_dssp HHTTCSSCEEEEECCCCCCCGGG-------T-----------------------------------------------SS
T ss_pred HHHHCCCCEEEEECCHHHcCCCC-------C-----------------------------------------------CC
Confidence 2 2456899999975432210 0 12
Q ss_pred CchHHHHHHHHHHHHHHh----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeee
Q 008324 228 PNTYVFTKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (570)
Q Consensus 228 ~n~Y~~sK~~aE~lv~~~----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
...|+.||+..+.+++.. ..++.+..+.|+.+..+. +.... .+. .....+.
T Consensus 200 ~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~----------------~~~~~-~~~--------~~~~r~~ 254 (346)
T 3kvo_A 200 HCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA----------------AMDML-GGP--------GIESQCR 254 (346)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH----------------HHHHH-CC----------CGGGCB
T ss_pred chHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH----------------HHHhh-ccc--------cccccCC
Confidence 357999999999888755 457999999998533321 01111 110 0122346
Q ss_pred ehHHHHHHHHHHHHHhhCCCCCCceE
Q 008324 304 PVDMVVNAMIVAMVAHAKQPSDANIY 329 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iy 329 (570)
..+|+|++++.++.. .. .-.++++
T Consensus 255 ~pedvA~~v~~L~s~-~~-~itG~~i 278 (346)
T 3kvo_A 255 KVDIIADAAYSIFQK-PK-SFTGNFV 278 (346)
T ss_dssp CTHHHHHHHHHHHTS-CT-TCCSCEE
T ss_pred CHHHHHHHHHHHHhc-CC-CCCceEE
Confidence 789999999998864 22 1235555
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.61 E-value=2.1e-14 Score=140.67 Aligned_cols=218 Identities=15% Similarity=0.111 Sum_probs=149.2
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
.+.|+||+++||||++-||++++++|++.| .+|++..|+...... ....+
T Consensus 6 ~dlf~GK~alVTGas~GIG~aia~~la~~G---a~Vv~~~~~~~~~~~---------------------------~~~~~ 55 (242)
T 4b79_A 6 HDIYAGQQVLVTGGSSGIGAAIAMQFAELG---AEVVALGLDADGVHA---------------------------PRHPR 55 (242)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSTTSTTS---------------------------CCCTT
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHhh---------------------------hhcCC
Confidence 356899999999999999999999999999 778889887654321 11367
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHh---CCccEEEEcCccCCc-----cccHHHHHHHhHHHHHHHHHHHHHc--cCceE
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELW---NELDIMVNSAAITKF-----DERYDVAFGINTLGVIHLVNFAKKC--VKLKV 156 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~---~~vdiViH~AA~v~f-----~~~~~~~~~~Nv~gt~~ll~la~~~--~~l~~ 156 (570)
+..+.+|+++ ++..+.++ .++|+++|+||.... .+.|+..+++|+.|+..+.+++..+ ++-.+
T Consensus 56 ~~~~~~Dv~~-------~~~v~~~~~~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~ 128 (242)
T 4b79_A 56 IRREELDITD-------SQRLQRLFEALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGS 128 (242)
T ss_dssp EEEEECCTTC-------HHHHHHHHHHCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEE
T ss_pred eEEEEecCCC-------HHHHHHHHHhcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCe
Confidence 8899999995 33344444 469999999997642 2457888999999999998887653 12368
Q ss_pred EEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHH
Q 008324 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (570)
Q Consensus 157 ~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+|.+||....... +....|+.||+
T Consensus 129 IVnisS~~~~~~~--------------------------------------------------------~~~~~Y~asKa 152 (242)
T 4b79_A 129 ILNIASMYSTFGS--------------------------------------------------------ADRPAYSASKG 152 (242)
T ss_dssp EEEECCGGGTSCC--------------------------------------------------------SSCHHHHHHHH
T ss_pred EEEEeeccccCCC--------------------------------------------------------CCCHHHHHHHH
Confidence 9999987543211 11347999999
Q ss_pred HHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHH
Q 008324 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (570)
Q Consensus 237 ~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~a 311 (570)
..+.+.+.. ..++++..|-|+.|-.+..+... .+ ......+....+ ..-+-..+|+|++
T Consensus 153 av~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~---~~----~~~~~~~~~~~P---------lgR~g~peeiA~~ 216 (242)
T 4b79_A 153 AIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLK---AD----VEATRRIMQRTP---------LARWGEAPEVASA 216 (242)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----C---CC----HHHHHHHHHTCT---------TCSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhccc---CC----HHHHHHHHhcCC---------CCCCcCHHHHHHH
Confidence 988887654 56899999999999876443211 11 111111111111 0113456899999
Q ss_pred HHHHHHHhhCCCCCCceEEecCC
Q 008324 312 MIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++.++.+.+.- -.++++.+.+|
T Consensus 217 v~fLaSd~a~~-iTG~~l~VDGG 238 (242)
T 4b79_A 217 AAFLCGPGASF-VTGAVLAVDGG 238 (242)
T ss_dssp HHHHTSGGGTT-CCSCEEEESTT
T ss_pred HHHHhCchhcC-ccCceEEECcc
Confidence 99888644322 23778888765
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.60 E-value=7.9e-15 Score=159.63 Aligned_cols=224 Identities=16% Similarity=0.196 Sum_probs=153.0
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+-.+++||||||||+||.+++++|++.|. .+|+++.|+.......+.+.+++ .. ...++.
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~--~~vvl~~R~~~~~~~~~~l~~~l---------~~---------~g~~v~ 315 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGA--ERLVLTSRRGPEAPGAAELAEEL---------RG---------HGCEVV 315 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTC--SEEEEEESSGGGSTTHHHHHHHH---------HT---------TTCEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCC--cEEEEEecCCcccHHHHHHHHHH---------Hh---------cCCEEE
Confidence 45689999999999999999999999873 36888899764322222222121 11 125788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhCC--ccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~--vdiViH~AA~v~f~-------~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
++.+|++ +.+..+.++++ +|+|||+||..... +.++..+++|+.|+.++.+++..++++.+||+
T Consensus 316 ~~~~Dvt-------d~~~v~~~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~ 388 (511)
T 2z5l_A 316 HAACDVA-------ERDALAALVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVL 388 (511)
T ss_dssp EEECCSS-------CHHHHHHHHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEE
T ss_pred EEEeCCC-------CHHHHHHHHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEE
Confidence 9999999 45555566654 99999999986532 34667789999999999999877546789999
Q ss_pred Eeccee-ecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHH
Q 008324 160 VSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (570)
Q Consensus 160 vSTa~v-~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~a 238 (570)
+||... +|. .....|+.+|+..
T Consensus 389 ~SS~a~~~g~---------------------------------------------------------~g~~~YaaaKa~l 411 (511)
T 2z5l_A 389 FSSVTGTWGN---------------------------------------------------------AGQGAYAAANAAL 411 (511)
T ss_dssp EEEGGGTTCC---------------------------------------------------------TTBHHHHHHHHHH
T ss_pred EeCHHhcCCC---------------------------------------------------------CCCHHHHHHHHHH
Confidence 999743 221 1135799999999
Q ss_pred HHHHHHh-ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHH
Q 008324 239 EMLMQQS-KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (570)
Q Consensus 239 E~lv~~~-~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~ 317 (570)
|.+.... ..++++++++|+.+..+ |..... . ...+. ..| ...++.++++++++.++.
T Consensus 412 d~la~~~~~~gi~v~sv~pG~~~~t------gm~~~~-~-~~~~~--~~g------------~~~l~~e~~a~~l~~al~ 469 (511)
T 2z5l_A 412 DALAERRRAAGLPATSVAWGLWGGG------GMAAGA-G-EESLS--RRG------------LRAMDPDAAVDALLGAMG 469 (511)
T ss_dssp HHHHHHHHTTTCCCEEEEECCBCST------TCCCCH-H-HHHHH--HHT------------BCCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEEECCcccCC------cccccc-c-HHHHH--hcC------------CCCCCHHHHHHHHHHHHh
Confidence 9998876 56899999999987322 111110 0 01111 111 235889999999999886
Q ss_pred HhhCCCCCCceEEecCCCCCcccHHHHHHHHh
Q 008324 318 AHAKQPSDANIYHVGSSLRNPVTLVSILDYGF 349 (570)
Q Consensus 318 ~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~ 349 (570)
... . .+.+. .+.|..+.....
T Consensus 470 ~~~-----~-~v~v~-----~~d~~~~~~~~~ 490 (511)
T 2z5l_A 470 RND-----V-CVTVV-----DVDWERFAPATN 490 (511)
T ss_dssp HTC-----S-EEEEC-----CBCHHHHHHHHH
T ss_pred CCC-----C-EEEEE-----eCCHHHHHhhhc
Confidence 321 1 22232 367887766543
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.60 E-value=8.8e-15 Score=150.67 Aligned_cols=173 Identities=10% Similarity=0.088 Sum_probs=120.1
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+||+|+||||||+||++++++|++.|. +|+++.|+........+..++ +... . ....++.++
T Consensus 1 ~~k~vlVTGas~GIG~ala~~L~~~G~---~v~~v~r~~~~~~~~~~~~~~---------~~~~-~-----~~~~~~~~~ 62 (327)
T 1jtv_A 1 ARTVVLITGCSSGIGLHLAVRLASDPS---QSFKVYATLRDLKTQGRLWEA---------ARAL-A-----CPPGSLETL 62 (327)
T ss_dssp CCEEEEESCCSSHHHHHHHHHHHTCTT---CCEEEEEEESCGGGTHHHHHH---------HHHT-T-----CCTTSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC---ceEEEEeecCcHHHHHHHHHH---------hhhc-c-----CCCCceEEE
Confidence 478999999999999999999999984 456667654432211111100 0000 0 002578899
Q ss_pred eccCCCCCCCCCchhhHHHHhC-----CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--cCce
Q 008324 91 PGDISSEDLGLKDSNLKEELWN-----ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--VKLK 155 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~-----~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~l~ 155 (570)
.+|+++ .+..+.+++ .+|+|||+||.... .+.++..+++|+.|+.++++++.. + .+..
T Consensus 63 ~~Dv~d-------~~~v~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g 135 (327)
T 1jtv_A 63 QLDVRD-------SKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSG 135 (327)
T ss_dssp ECCTTC-------HHHHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred EecCCC-------HHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence 999994 444455555 38999999997532 234677899999999999998743 1 2568
Q ss_pred EEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHH
Q 008324 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (570)
Q Consensus 156 ~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
++|++||....... .....|+.||
T Consensus 136 ~IV~isS~~~~~~~--------------------------------------------------------~~~~~Y~aSK 159 (327)
T 1jtv_A 136 RVLVTGSVGGLMGL--------------------------------------------------------PFNDVYCASK 159 (327)
T ss_dssp EEEEEEEGGGTSCC--------------------------------------------------------TTCHHHHHHH
T ss_pred EEEEECCcccccCC--------------------------------------------------------CCChHHHHHH
Confidence 99999997543211 1235799999
Q ss_pred HHHHHHHHHh-----ccCCcEEEEecCceecCCC
Q 008324 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYK 264 (570)
Q Consensus 236 ~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ 264 (570)
+..|.+.+.+ ..++++++++|+.|.++..
T Consensus 160 ~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~ 193 (327)
T 1jtv_A 160 FALEGLCESLAVLLLPFGVHLSLIECGPVHTAFM 193 (327)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBCC---
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHH
Confidence 9999998765 3589999999999987653
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.5e-14 Score=144.94 Aligned_cols=167 Identities=12% Similarity=0.119 Sum_probs=117.2
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.-++ |+++||||+|+||++++++|++.| .+|+++.|+... .+.+.+++ .. ..++
T Consensus 18 ~~~~-k~vlVTGas~gIG~aia~~La~~G---~~V~~~~r~~~~---~~~~~~~~-------------~~------~~~~ 71 (272)
T 2nwq_A 18 SHMS-STLFITGATSGFGEACARRFAEAG---WSLVLTGRREER---LQALAGEL-------------SA------KTRV 71 (272)
T ss_dssp ---C-CEEEESSTTTSSHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHHH-------------TT------TSCE
T ss_pred CCcC-cEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHHh-------------hc------CCcE
Confidence 3455 899999999999999999999998 678888886421 11211111 00 1368
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHHc-
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC- 151 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f--------~~~~~~~~~~Nv~gt~~ll~la~~~- 151 (570)
.++.+|+++ .+..+.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 72 ~~~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m 144 (272)
T 2nwq_A 72 LPLTLDVRD-------RAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRL 144 (272)
T ss_dssp EEEECCTTC-------HHHHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred EEEEcCCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999994 444445554 36999999997532 2456778999999988887776531
Q ss_pred --cCce-EEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 008324 152 --VKLK-VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (570)
Q Consensus 152 --~~l~-~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
.+.. ++|++||....... +..
T Consensus 145 ~~~~~g~~IV~isS~~~~~~~--------------------------------------------------------~~~ 168 (272)
T 2nwq_A 145 IAHGAGASIVNLGSVAGKWPY--------------------------------------------------------PGS 168 (272)
T ss_dssp HHHCTTCEEEEECCGGGTSCC--------------------------------------------------------TTC
T ss_pred HhcCCCcEEEEeCCchhccCC--------------------------------------------------------CCC
Confidence 2445 89999997543211 123
Q ss_pred chHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCC
Q 008324 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (570)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~ 263 (570)
..|+.||+..|.+.+.. ..++++++++|+.|.++.
T Consensus 169 ~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~ 208 (272)
T 2nwq_A 169 HVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEF 208 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC---
T ss_pred chHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcc
Confidence 57999999999998765 347999999999998764
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.58 E-value=2.7e-14 Score=153.37 Aligned_cols=218 Identities=16% Similarity=0.138 Sum_probs=142.0
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
..++||+++||||+|.||.++++.|++.| .+|+++.|+.... .+. ++ .++ .++
T Consensus 209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~G---a~Vvl~~r~~~~~----~l~-~~---------~~~----------~~~ 261 (454)
T 3u0b_A 209 KPLDGKVAVVTGAARGIGATIAEVFARDG---ATVVAIDVDGAAE----DLK-RV---------ADK----------VGG 261 (454)
T ss_dssp STTTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEECGGGHH----HHH-HH---------HHH----------HTC
T ss_pred cCCCCCEEEEeCCchHHHHHHHHHHHHCC---CEEEEEeCCccHH----HHH-HH---------HHH----------cCC
Confidence 34689999999999999999999999998 5788888864322 111 00 001 235
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhC--------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc-
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELWN--------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC- 151 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~--------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~- 151 (570)
.++.+|+++++ ..+.+++ .+|+|||+||.... .+.++..+++|+.|+.++.+++...
T Consensus 262 ~~~~~Dvtd~~-------~v~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~ 334 (454)
T 3u0b_A 262 TALTLDVTADD-------AVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNG 334 (454)
T ss_dssp EEEECCTTSTT-------HHHHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTT
T ss_pred eEEEEecCCHH-------HHHHHHHHHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 68899999643 2223322 39999999998642 2456778999999999999998763
Q ss_pred --cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc
Q 008324 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (570)
Q Consensus 152 --~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
.+..+||++||....... ....
T Consensus 335 ~~~~~g~iV~iSS~a~~~g~--------------------------------------------------------~g~~ 358 (454)
T 3u0b_A 335 TIGEGGRVIGLSSMAGIAGN--------------------------------------------------------RGQT 358 (454)
T ss_dssp SSCTTCEEEEECCHHHHHCC--------------------------------------------------------TTCH
T ss_pred hhcCCCEEEEEeChHhCCCC--------------------------------------------------------CCCH
Confidence 145789999997543221 1135
Q ss_pred hHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeee
Q 008324 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (570)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.|+.||+..+.+.+.. ..+++++.+.|+.|.++.....+.... ... .... ....+..
T Consensus 359 ~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~------~~~-~~~~-----------~l~r~g~ 420 (454)
T 3u0b_A 359 NYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATR------EVG-RRLN-----------SLFQGGQ 420 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------C------HHH-HHSB-----------TTSSCBC
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhH------HHH-Hhhc-----------cccCCCC
Confidence 7999999666665543 458999999999998765432221110 000 0000 0112346
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.+|+++++..++..... .-.++++++.++
T Consensus 421 pedvA~~v~fL~s~~a~-~itG~~i~vdGG 449 (454)
T 3u0b_A 421 PVDVAELIAYFASPASN-AVTGNTIRVCGQ 449 (454)
T ss_dssp HHHHHHHHHHHHCGGGT-TCCSCEEEESSS
T ss_pred HHHHHHHHHHHhCCccC-CCCCcEEEECCc
Confidence 78999999988764332 223788988876
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=4.7e-14 Score=139.73 Aligned_cols=222 Identities=13% Similarity=0.114 Sum_probs=137.9
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+||||||+||++++++|++.| .+|+++.|+..... .+. + ++.. ..++..+
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~---~~~-~---------l~~~---------~~~~~~~-- 54 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAG---HTVACHDESFKQKD---ELE-A---------FAET---------YPQLKPM-- 54 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTT---CEEEECCGGGGSHH---HHH-H---------HHHH---------CTTSEEC--
T ss_pred eEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHH---HHH-H---------HHhc---------CCcEEEE--
Confidence 689999999999999999999998 67888888754321 111 0 1111 1233333
Q ss_pred cCCCCCCCCCchhhHHH---HhCCccEEEEcCccC-Cc-------cccHHHHHHHhHHHHHHHHHHHHHc---cCceEEE
Q 008324 93 DISSEDLGLKDSNLKEE---LWNELDIMVNSAAIT-KF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~---l~~~vdiViH~AA~v-~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~l~~~V 158 (570)
|..+ -....+. ...++|+|||+||.. .. .+.++..+++|+.|+.++++++... .+..++|
T Consensus 55 d~~~------v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv 128 (254)
T 1zmt_A 55 SEQE------PAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHII 128 (254)
T ss_dssp CCCS------HHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CHHH------HHHHHHHHHHHhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 3321 1122222 234799999999976 31 2346778999999999999987531 2457999
Q ss_pred EEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHH
Q 008324 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (570)
Q Consensus 159 ~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~a 238 (570)
++||...+... +....|+.||+..
T Consensus 129 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~ 152 (254)
T 1zmt_A 129 FITSATPFGPW--------------------------------------------------------KELSTYTSARAGA 152 (254)
T ss_dssp EECCSTTTSCC--------------------------------------------------------TTCHHHHHHHHHH
T ss_pred EECCcccccCC--------------------------------------------------------CCchHHHHHHHHH
Confidence 99997543211 1235799999999
Q ss_pred HHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHH
Q 008324 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (570)
Q Consensus 239 E~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii 313 (570)
+.+.+.. ..++.+++++|+.|+|+...... ..+................ + ...+...+|+|++++
T Consensus 153 ~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~-~T~~~~~~~~~~~~~~~~~----p-----~~~~~~p~dvA~~v~ 222 (254)
T 1zmt_A 153 CTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFY-PTEPWKTNPEHVAHVKKVT----A-----LQRLGTQKELGELVA 222 (254)
T ss_dssp HHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSC-BHHHHTTCHHHHHHHHHHS----S-----SSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcCcEEEEEecCccccccccccC-CCcccccChHHHHHHhccC----C-----CCCCcCHHHHHHHHH
Confidence 9988765 34899999999999876432110 0000000001111111100 0 112567999999999
Q ss_pred HHHHHhhCCCCCCceEEecCC
Q 008324 314 VAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 314 ~a~~~~~~~~~~~~iyni~s~ 334 (570)
.++.... ..-.++++++.++
T Consensus 223 ~l~s~~~-~~~tG~~~~vdgG 242 (254)
T 1zmt_A 223 FLASGSC-DYLTGQVFWLAGG 242 (254)
T ss_dssp HHHTTSC-GGGTTCEEEESTT
T ss_pred HHhCccc-CCccCCEEEECCC
Confidence 8875322 1123788998877
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=7e-14 Score=138.74 Aligned_cols=225 Identities=13% Similarity=0.219 Sum_probs=149.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++-||++++++|++.| .+|++..|+.......+.+. +. ..++.+
T Consensus 5 L~gKvalVTGas~GIG~aia~~la~~G---a~Vv~~~r~~~~~~~~~~~~-------------~~---------~~~~~~ 59 (258)
T 4gkb_A 5 LQDKVVIVTGGASGIGGAISMRLAEER---AIPVVFARHAPDGAFLDALA-------------QR---------QPRATY 59 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCCHHHHHHHH-------------HH---------CTTCEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEECCcccHHHHHHHH-------------hc---------CCCEEE
Confidence 789999999999999999999999999 67888999876533222222 11 367889
Q ss_pred EeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc------cccHHHHHHHhHHHHHHHHHHHHHc-c-Cc
Q 008324 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF------DERYDVAFGINTLGVIHLVNFAKKC-V-KL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f------~~~~~~~~~~Nv~gt~~ll~la~~~-~-~l 154 (570)
+.+|++++ +..+.+ +..+|++||+||.... .+.++..+++|+.|+..+.+.+... + +-
T Consensus 60 ~~~Dv~~~-------~~v~~~v~~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~ 132 (258)
T 4gkb_A 60 LPVELQDD-------AQCRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR 132 (258)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EEeecCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 99999953 322233 3469999999997431 3557788999999999998877642 1 23
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|.+||....... +....|+.|
T Consensus 133 G~IVnisS~~~~~~~--------------------------------------------------------~~~~~Y~as 156 (258)
T 4gkb_A 133 GAIVNISSKTAVTGQ--------------------------------------------------------GNTSGYCAS 156 (258)
T ss_dssp CEEEEECCTHHHHCC--------------------------------------------------------SSCHHHHHH
T ss_pred CeEEEEeehhhccCC--------------------------------------------------------CCchHHHHH
Confidence 589999997643221 123579999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHH
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..+.+.+.. ..++++..|.|+.|-.+..+. |..................+ .+ .-+...+|+|
T Consensus 157 Kaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~---~~~~~~~~~~~~~~~~~~~p---lg-----~R~g~peeiA 225 (258)
T 4gkb_A 157 KGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRN---WIATFEDPEAKLAEIAAKVP---LG-----RRFTTPDEIA 225 (258)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC--------------CHHHHHHTTCT---TT-----TSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhh---hhhcccChHHHHHHHHhcCC---CC-----CCCcCHHHHH
Confidence 99988887754 568999999999998765421 11111111111222222111 00 0134568999
Q ss_pred HHHHHHHHHhhCCCCCCceEEecCC
Q 008324 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++.++.+.+.- -.|+++.+.+|
T Consensus 226 ~~v~fLaS~~a~~-iTG~~i~VDGG 249 (258)
T 4gkb_A 226 DTAVFLLSPRASH-TTGEWLFVDGG 249 (258)
T ss_dssp HHHHHHHSGGGTT-CCSCEEEESTT
T ss_pred HHHHHHhCchhcC-ccCCeEEECCC
Confidence 9999888644332 23788988877
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.56 E-value=4.7e-14 Score=140.87 Aligned_cols=227 Identities=15% Similarity=0.106 Sum_probs=147.3
Q ss_pred HHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 008324 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
+.+.++||+++||||++-||+++++.|++.| .+|++..|++.. .+... ++. ..
T Consensus 23 Ms~rL~gKvalVTGas~GIG~aiA~~la~~G---a~V~i~~r~~~~---l~~~~-------------~~~--------g~ 75 (273)
T 4fgs_A 23 MTQRLNAKIAVITGATSGIGLAAAKRFVAEG---ARVFITGRRKDV---LDAAI-------------AEI--------GG 75 (273)
T ss_dssp --CTTTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HHH--------CT
T ss_pred hcchhCCCEEEEeCcCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHH-------------HHc--------CC
Confidence 4456899999999999999999999999999 678888886422 11111 111 35
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-
Q 008324 86 KITFVPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK- 150 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~- 150 (570)
++..+.+|++++ +..+.+ +.++|++||+||.... .+.|+..+++|+.|+..+.+.+..
T Consensus 76 ~~~~~~~Dv~~~-------~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~ 148 (273)
T 4fgs_A 76 GAVGIQADSANL-------AELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPL 148 (273)
T ss_dssp TCEEEECCTTCH-------HHHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTT
T ss_pred CeEEEEecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 778899999953 333333 3468999999997542 256888899999999999998865
Q ss_pred ccCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 151 CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 151 ~~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
|++-.++|.+||....... +....
T Consensus 149 m~~~G~IInisS~~~~~~~--------------------------------------------------------~~~~~ 172 (273)
T 4fgs_A 149 LARGSSVVLTGSTAGSTGT--------------------------------------------------------PAFSV 172 (273)
T ss_dssp EEEEEEEEEECCGGGGSCC--------------------------------------------------------TTCHH
T ss_pred HhhCCeEEEEeehhhccCC--------------------------------------------------------CCchH
Confidence 3444578998886533211 12357
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..+.+.+.. ..++++..|-||.|-.+......+ ........+...+....+ . .-+.-.
T Consensus 173 Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~--~~~~~~~~~~~~~~~~~P----l-----gR~g~p 241 (273)
T 4fgs_A 173 YAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAG--KDPVQQQGLLNALAAQVP----M-----GRVGRA 241 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC-----------CHHHHHHHHHHHHHHST----T-----SSCBCH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhc--cCchhhHHHHHHHHhcCC----C-----CCCcCH
Confidence 999999998887754 458999999999987754321110 000011112222211111 0 012346
Q ss_pred HHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|+|++++.++.+.+.- -.|+++.+.+|
T Consensus 242 eeiA~~v~FLaSd~a~~-iTG~~i~VDGG 269 (273)
T 4fgs_A 242 EEVAAAALFLASDDSSF-VTGAELFVDGG 269 (273)
T ss_dssp HHHHHHHHHHHSGGGTT-CCSCEEEESTT
T ss_pred HHHHHHHHHHhCchhcC-ccCCeEeECcC
Confidence 89999999988644332 23788888776
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.55 E-value=4.7e-14 Score=140.19 Aligned_cols=166 Identities=17% Similarity=0.198 Sum_probs=118.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||++++++|++.| .+|+++.|+... .+.+.++ ++.. ..++.+
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~ 58 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAG---ATVYITGRHLDT---LRVVAQE---------AQSL---------GGQCVP 58 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHHH---------SSEEEE
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHH---------HHHc---------CCceEE
Confidence 578999999999999999999999998 678888886422 1111111 1111 256889
Q ss_pred EeccCCCCCCCCCchhhHHHH--------hCCccEEEEcCc--cC--------Cc----cccHHHHHHHhHHHHHHHHHH
Q 008324 90 VPGDISSEDLGLKDSNLKEEL--------WNELDIMVNSAA--IT--------KF----DERYDVAFGINTLGVIHLVNF 147 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l--------~~~vdiViH~AA--~v--------~f----~~~~~~~~~~Nv~gt~~ll~l 147 (570)
+.+|++++ +..+.+ ...+|++||+|| .. .+ .+.++..+++|+.|+.++.+.
T Consensus 59 ~~~Dv~~~-------~~v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 131 (260)
T 2qq5_A 59 VVCDSSQE-------SEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVY 131 (260)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHH
T ss_pred EECCCCCH-------HHHHHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHH
Confidence 99999953 322222 346899999994 21 11 234677889999999888777
Q ss_pred HHH-c--cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhcccccccc
Q 008324 148 AKK-C--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKL 224 (570)
Q Consensus 148 a~~-~--~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 224 (570)
+.. + .+..++|++||......
T Consensus 132 ~~~~~~~~~~g~iv~isS~~~~~~-------------------------------------------------------- 155 (260)
T 2qq5_A 132 GARLMVPAGQGLIVVISSPGSLQY-------------------------------------------------------- 155 (260)
T ss_dssp HHHHHGGGTCCEEEEECCGGGTSC--------------------------------------------------------
T ss_pred HHHHHhhcCCcEEEEEcChhhcCC--------------------------------------------------------
Confidence 653 2 24578999999754321
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCC
Q 008324 225 HGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (570)
Q Consensus 225 ~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~ 263 (570)
.....|+.||+..|.+.+.+ ..++++++++|+.|.++.
T Consensus 156 -~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 198 (260)
T 2qq5_A 156 -MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTEL 198 (260)
T ss_dssp -CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTT
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHH
Confidence 11256999999999998765 358999999999998764
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=4.9e-14 Score=139.87 Aligned_cols=168 Identities=14% Similarity=0.185 Sum_probs=118.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHH---hCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILR---VQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~---~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
++||+++||||+|+||++++++|++ .| .+|+++.|+... .+.+. +.+++..+ ..+
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G---~~V~~~~r~~~~---~~~~~---------~~l~~~~~-------~~~ 61 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLARLLSPG---SVMLVSARSESM---LRQLK---------EELGAQQP-------DLK 61 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTT---CEEEEEESCHHH---HHHHH---------HHHHHHCT-------TSE
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHhhcCC---CeEEEEeCCHHH---HHHHH---------HHHHhhCC-------CCe
Confidence 5789999999999999999999998 77 678888886422 11111 11222111 246
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHh----C-----Ccc--EEEEcCccCC-----c-----cccHHHHHHHhHHHHHHHH
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELW----N-----ELD--IMVNSAAITK-----F-----DERYDVAFGINTLGVIHLV 145 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~----~-----~vd--iViH~AA~v~-----f-----~~~~~~~~~~Nv~gt~~ll 145 (570)
+.++.+|+++ .+..+.++ + .+| +|||+||... + .+.++..+++|+.|+.+++
T Consensus 62 ~~~~~~Dv~~-------~~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 134 (259)
T 1oaa_A 62 VVLAAADLGT-------EAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLT 134 (259)
T ss_dssp EEEEECCTTS-------HHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHH
T ss_pred EEEEecCCCC-------HHHHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHH
Confidence 8899999995 33333332 2 468 9999999742 1 1346778999999999999
Q ss_pred HHHHHc-c----CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhcccc
Q 008324 146 NFAKKC-V----KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTE 220 (570)
Q Consensus 146 ~la~~~-~----~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 220 (570)
+++... . +..++|++||...+...
T Consensus 135 ~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------------------------------------------- 163 (259)
T 1oaa_A 135 SGTLNAFQDSPGLSKTVVNISSLCALQPY--------------------------------------------------- 163 (259)
T ss_dssp HHHHHTSCCCTTCEEEEEEECCGGGTSCC---------------------------------------------------
T ss_pred HHHHHHHhhccCCCceEEEEcCchhcCCC---------------------------------------------------
Confidence 998753 1 23579999998654211
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHh---ccCCcEEEEecCceecC
Q 008324 221 RAKLHGWPNTYVFTKTMGEMLMQQS---KENLSLVIIRPTVVSGT 262 (570)
Q Consensus 221 ~~~~~~~~n~Y~~sK~~aE~lv~~~---~~~lp~~IvRPsiV~g~ 262 (570)
+....|+.||+..+.+.+.. ..++++..+.|+.|-.+
T Consensus 164 -----~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~ 203 (259)
T 1oaa_A 164 -----KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND 203 (259)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH
T ss_pred -----CCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcc
Confidence 12357999999999998765 22488889999887553
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.55 E-value=2.1e-14 Score=143.58 Aligned_cols=227 Identities=14% Similarity=0.051 Sum_probs=144.1
Q ss_pred hcCCCEEEEECC--cchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 9 FLENKTILVSGV--TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 9 ~~~~k~VlITGa--TGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
.++||+|+|||| +|+||++++++|++.| .+|+++.|+.... .+.+. ++. ..+
T Consensus 4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G---~~V~~~~r~~~~~--~~~~~-------------~~~--------~~~ 57 (269)
T 2h7i_A 4 LLDGKRILVSGIITDSSIAFHIARVAQEQG---AQLVLTGFDRLRL--IQRIT-------------DRL--------PAK 57 (269)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTT---CEEEEEECSCHHH--HHHHH-------------TTS--------SSC
T ss_pred ccCCCEEEEECCCCCCchHHHHHHHHHHCC---CEEEEEecChHHH--HHHHH-------------Hhc--------CCC
Confidence 367999999999 9999999999999998 6788888865321 11111 111 246
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhC----------CccEEEEcCccCC--------c----cccHHHHHHHhHHHHHHH
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELWN----------ELDIMVNSAAITK--------F----DERYDVAFGINTLGVIHL 144 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~----------~vdiViH~AA~v~--------f----~~~~~~~~~~Nv~gt~~l 144 (570)
+.++.+|+++ .+..+.+++ .+|+|||+||... + .+.++..+++|+.|+.++
T Consensus 58 ~~~~~~Dv~~-------~~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l 130 (269)
T 2h7i_A 58 APLLELDVQN-------EEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASM 130 (269)
T ss_dssp CCEEECCTTC-------HHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred ceEEEccCCC-------HHHHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHH
Confidence 7789999995 333334443 7999999999754 1 234667789999999999
Q ss_pred HHHHHHc-cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccc
Q 008324 145 VNFAKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAK 223 (570)
Q Consensus 145 l~la~~~-~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 223 (570)
++.+... ..-.++|++||....+.
T Consensus 131 ~~~~~~~~~~~g~iv~iss~~~~~~------------------------------------------------------- 155 (269)
T 2h7i_A 131 AKALLPIMNPGGSIVGMDFDPSRAM------------------------------------------------------- 155 (269)
T ss_dssp HHHHGGGEEEEEEEEEEECCCSSCC-------------------------------------------------------
T ss_pred HHHHHHhhccCCeEEEEcCcccccc-------------------------------------------------------
Confidence 9998753 22258999998643210
Q ss_pred cCCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCC-Cccc-cCcc-chHHHHHHHhcCCceeeecC
Q 008324 224 LHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPF-PGWV-EDLK-TINTLFVASAQGNLRCLVGE 295 (570)
Q Consensus 224 ~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~-~gw~-~~~~-~~~~~i~~~~~G~~~~~~~~ 295 (570)
+....|+.||+..+.+.+.+ ..++++..++|+.|.++..... .+.. +... ............ .+..
T Consensus 156 --~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~p~~ 229 (269)
T 2h7i_A 156 --PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQR----APIG 229 (269)
T ss_dssp --TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHH----CTTC
T ss_pred --CchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhcc----CCcc
Confidence 12357999999999888764 3489999999998876421100 0000 0000 000001111110 0000
Q ss_pred CCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 296 TKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 296 ~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+.+...+|+|++++.++.+.. ..-.++++++.+|
T Consensus 230 ----rr~~~p~dvA~~v~~L~s~~~-~~itG~~i~vdGG 263 (269)
T 2h7i_A 230 ----WNMKDATPVAKTVCALLSDWL-PATTGDIIYADGG 263 (269)
T ss_dssp ----CCTTCCHHHHHHHHHHHSSSC-TTCCSEEEEESTT
T ss_pred ----cCCCCHHHHHHHHHHHhCchh-ccCcceEEEecCC
Confidence 024567899999998885322 2223778888776
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=1.2e-13 Score=141.71 Aligned_cols=211 Identities=17% Similarity=0.217 Sum_probs=134.7
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC------CcccHHHHHHHHHhhhhhHHHHHhhhcccccccc
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA------DIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFI 83 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~------~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~ 83 (570)
++||+|+||||+|+||++++++|++.| .+|++..|.. +.....+.+.++ ++..
T Consensus 7 l~gk~~lVTGas~GIG~~~a~~La~~G---a~Vv~~~~~~~~~~~~R~~~~~~~~~~~---------l~~~--------- 65 (319)
T 1gz6_A 7 FDGRVVLVTGAGGGLGRAYALAFAERG---ALVVVNDLGGDFKGVGKGSSAADKVVEE---------IRRR--------- 65 (319)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEECCCBCTTSCBCCSHHHHHHHHH---------HHHT---------
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEcCCcccccccCCHHHHHHHHHH---------HHhh---------
Confidence 679999999999999999999999998 6777765531 111122222211 1111
Q ss_pred CCceEEEeccCCCCCCCCCchhhHHH---HhCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc--
Q 008324 84 SEKITFVPGDISSEDLGLKDSNLKEE---LWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-- 151 (570)
Q Consensus 84 ~~kv~~v~gDl~~~~lgls~~~~~~~---l~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~-- 151 (570)
... +.+|++++.-. ....+. ...++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 66 ~~~---~~~D~~~~~~~---~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 139 (319)
T 1gz6_A 66 GGK---AVANYDSVEAG---EKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMK 139 (319)
T ss_dssp TCE---EEEECCCGGGH---HHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCe---EEEeCCCHHHH---HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 011 24788854210 011111 23479999999997542 2346778999999999998887431
Q ss_pred -cCceEEEEEeccee-ecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc
Q 008324 152 -VKLKVFVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (570)
Q Consensus 152 -~~l~~~V~vSTa~v-~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
.+..++|++||... ++. ....
T Consensus 140 ~~~~grIV~vsS~~~~~~~---------------------------------------------------------~~~~ 162 (319)
T 1gz6_A 140 KQNYGRIIMTASASGIYGN---------------------------------------------------------FGQA 162 (319)
T ss_dssp HHTCEEEEEECCHHHHHCC---------------------------------------------------------TTCH
T ss_pred HcCCCEEEEECChhhccCC---------------------------------------------------------CCCH
Confidence 25679999999643 221 1135
Q ss_pred hHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeee
Q 008324 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (570)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.|+.||+..+.+.+.. ..++++.+++|+.+ .+..+ ... ... ..+.+.
T Consensus 163 ~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~---~~~-----~~~-------------------~~~~~~ 214 (319)
T 1gz6_A 163 NYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTE---TVM-----PED-------------------LVEALK 214 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTG---GGS-----CHH-------------------HHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccccc---ccC-----Chh-------------------hhccCC
Confidence 7999999999988765 35899999999987 32110 000 000 112357
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.+++|.+++.++.. .....+++|++.++
T Consensus 215 p~dvA~~~~~l~s~--~~~~tG~~~~v~GG 242 (319)
T 1gz6_A 215 PEYVAPLVLWLCHE--SCEENGGLFEVGAG 242 (319)
T ss_dssp GGGTHHHHHHHTST--TCCCCSCEEEEETT
T ss_pred HHHHHHHHHHHhCc--hhhcCCCEEEECCC
Confidence 88999999887753 12224778888766
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.52 E-value=6.6e-13 Score=131.23 Aligned_cols=223 Identities=15% Similarity=0.141 Sum_probs=147.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++-||++++++|++.| .+|++..|++.. .+.+.+++ ++ ...++.+
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~G---a~Vv~~~~~~~~---~~~~~~~i---------~~---------~g~~~~~ 60 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALND---SIVVAVELLEDR---LNQIVQEL---------RG---------MGKEVLG 60 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHHH---------HH---------TTCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEECCHHH---HHHHHHHH---------Hh---------cCCcEEE
Confidence 689999999999999999999999999 678888886432 22222121 11 1367889
Q ss_pred EeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHH-c--
Q 008324 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKK-C-- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~----f----~~~~~~~~~~Nv~gt~~ll~la~~-~-- 151 (570)
+.+|++++ +..+.+ +..+|+++|+||... + .+.|+..+++|+.|+..+.+.+.. |
T Consensus 61 ~~~Dvt~~-------~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~ 133 (254)
T 4fn4_A 61 VKADVSKK-------KDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLK 133 (254)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 99999953 333333 346999999999642 2 245788899999999999888765 3
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.++|.+||....... +....|
T Consensus 134 ~~~G~IVnisS~~g~~~~--------------------------------------------------------~~~~~Y 157 (254)
T 4fn4_A 134 QGKGVIVNTASIAGIRGG--------------------------------------------------------FAGAPY 157 (254)
T ss_dssp HTCEEEEEECCGGGTCSS--------------------------------------------------------SSCHHH
T ss_pred cCCcEEEEEechhhcCCC--------------------------------------------------------CCChHH
Confidence 244689999987543211 113469
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+....+.+.. ..++++..|-|+.|-.+..... +.+.-....... .... ..+ -+-..+
T Consensus 158 ~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~--~~~~~~~~~~~~-~~~~-----~~~------R~g~pe 223 (254)
T 4fn4_A 158 TVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGS--SKPSELGMRTLT-KLMS-----LSS------RLAEPE 223 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSC--SSCCHHHHHHHH-HHHT-----TCC------CCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccc--cCCcHHHHHHHH-hcCC-----CCC------CCcCHH
Confidence 99999888887654 5689999999999977543211 001000011111 1000 000 123468
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++.+.+. --.|+++.+.+|
T Consensus 224 diA~~v~fLaSd~a~-~iTG~~i~VDGG 250 (254)
T 4fn4_A 224 DIANVIVFLASDEAS-FVNGDAVVVDGG 250 (254)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhCchhc-CCcCCEEEeCCC
Confidence 999999988864432 223788888776
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.52 E-value=1.9e-13 Score=135.18 Aligned_cols=221 Identities=17% Similarity=0.113 Sum_probs=146.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++-||++++++|++.| .+|++..|+... .++..++ +++. ..++.+
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~G---a~Vvi~~~~~~~---~~~~~~~---------l~~~---------g~~~~~ 62 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAG---ARVILNDIRATL---LAESVDT---------LTRK---------GYDAHG 62 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEECCSCHHH---HHHHHHH---------HHHT---------TCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHH---------HHhc---------CCcEEE
Confidence 689999999999999999999999999 678888775422 1221111 1111 257889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c---
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--- 151 (570)
+.+|++++ +..+.++ ..+|+++|+||.... .+.|+..+++|+.|+..+.+.+.. |
T Consensus 63 ~~~Dv~~~-------~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~ 135 (255)
T 4g81_D 63 VAFDVTDE-------LAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIAR 135 (255)
T ss_dssp CCCCTTCH-------HHHHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeeCCCH-------HHHHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 99999953 3333332 358999999997642 256788899999999999887643 3
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.++|.+||....... +....|
T Consensus 136 ~~~G~IVnisS~~~~~~~--------------------------------------------------------~~~~~Y 159 (255)
T 4g81_D 136 NSGGKIINIGSLTSQAAR--------------------------------------------------------PTVAPY 159 (255)
T ss_dssp TCCEEEEEECCGGGTSBC--------------------------------------------------------TTCHHH
T ss_pred cCCCEEEEEeehhhcCCC--------------------------------------------------------CCchhH
Confidence 134689999987643221 123569
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.. ..++++..|-||.|..+..+. ..++ ......+....+ . .-+.-.+
T Consensus 160 ~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~---~~~~----~~~~~~~~~~~P----l-----~R~g~pe 223 (255)
T 4g81_D 160 TAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTA---LIED----KQFDSWVKSSTP----S-----QRWGRPE 223 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHH---HHTC----HHHHHHHHHHST----T-----CSCBCGG
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhc---ccCC----HHHHHHHHhCCC----C-----CCCcCHH
Confidence 99999888887654 458999999999997754321 1111 111111111110 0 0123457
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++.+.+. --.|+++.+.+|
T Consensus 224 diA~~v~fL~S~~a~-~iTG~~i~VDGG 250 (255)
T 4g81_D 224 ELIGTAIFLSSKASD-YINGQIIYVDGG 250 (255)
T ss_dssp GGHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhCchhC-CCcCCEEEECCC
Confidence 999999988864332 223778888766
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.51 E-value=8.7e-14 Score=136.95 Aligned_cols=217 Identities=12% Similarity=0.093 Sum_probs=133.2
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEE-E--cCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF-V--RAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~l-v--R~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
||+++||||+|+||++++++|++.| .+|+++ . |+... .+.+.+++ ....
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~~~~r~~~~---~~~~~~~~----------------------~~~~ 52 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDG---YTVVCHDASFADAAE---RQRFESEN----------------------PGTI 52 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTT---CEEEECCGGGGSHHH---HHHHHHHS----------------------TTEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC---CEEEEecCCcCCHHH---HHHHHHHh----------------------CCCc
Confidence 5899999999999999999999998 678887 5 75421 11111110 0111
Q ss_pred EEeccCCCCCCCCCchhhHHHHh---CCccEEEEcCccCCc----------cccHHHHHHHhHHHHHHHHHHHHH-c--c
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW---NELDIMVNSAAITKF----------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~---~~vdiViH~AA~v~f----------~~~~~~~~~~Nv~gt~~ll~la~~-~--~ 152 (570)
+. |..+ -....+.+. ..+|+|||+||.... .+.++..+++|+.|+.++++++.. + .
T Consensus 53 ~~--~~~~------v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~ 124 (244)
T 1zmo_A 53 AL--AEQK------PERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAA 124 (244)
T ss_dssp EC--CCCC------GGGHHHHHGGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred cc--CHHH------HHHHHHHHHHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 11 2221 122222332 369999999997543 144677899999999999998763 2 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+... +....|+
T Consensus 125 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 148 (244)
T 1zmo_A 125 GGASVIFITSSVGKKPL--------------------------------------------------------AYNPLYG 148 (244)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTCTTHH
T ss_pred CCcEEEEECChhhCCCC--------------------------------------------------------CCchHHH
Confidence 45789999997544321 1135699
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.. ..++.+.+++|+.|.++.... | +..... ......... ..+ ...+...++
T Consensus 149 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---~-~~~~~~-~~~~~~~~~---~~p-----~~r~~~pe~ 215 (244)
T 1zmo_A 149 PARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFP---T-SDWENN-PELRERVDR---DVP-----LGRLGRPDE 215 (244)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBC---H-HHHHHC-HHHHHHHHH---HCT-----TCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccc---c-ccccch-HHHHHHHhc---CCC-----CCCCcCHHH
Confidence 9999999988764 347999999999987753200 0 000000 001111100 000 012567899
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++.++..... .-.++++.+.+|
T Consensus 216 vA~~v~~l~s~~~~-~~tG~~i~vdgG 241 (244)
T 1zmo_A 216 MGALITFLASRRAA-PIVGQFFAFTGG 241 (244)
T ss_dssp HHHHHHHHHTTTTG-GGTTCEEEESTT
T ss_pred HHHHHHHHcCcccc-CccCCEEEeCCC
Confidence 99999988753221 112678887765
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.51 E-value=8.1e-13 Score=129.67 Aligned_cols=219 Identities=14% Similarity=0.092 Sum_probs=146.7
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++-||+++++.|++.| .+|++..|+.... ..+.+. +. ..++..
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~G---a~Vvi~~r~~~~~-~~~~~~-------------~~---------g~~~~~ 60 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAAG---AEVVCAARRAPDE-TLDIIA-------------KD---------GGNASA 60 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCCHH-HHHHHH-------------HT---------TCCEEE
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHcC---CEEEEEeCCcHHH-HHHHHH-------------Hh---------CCcEEE
Confidence 689999999999999999999999999 6788888865421 111111 11 367889
Q ss_pred EeccCCCCCCCCCchhhHHHHh--CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--c-CceE
Q 008324 90 VPGDISSEDLGLKDSNLKEELW--NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V-KLKV 156 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~--~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~-~l~~ 156 (570)
+.+|++++.. .+.++ ..+|+++|+||.... .+.|+..+++|+.|+..+.+.+.. | + +-.+
T Consensus 61 ~~~Dv~d~~~-------v~~~~~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~ 133 (247)
T 4hp8_A 61 LLIDFADPLA-------AKDSFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGK 133 (247)
T ss_dssp EECCTTSTTT-------TTTSSTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEE
T ss_pred EEccCCCHHH-------HHHHHHhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcE
Confidence 9999997542 12222 359999999997642 256888899999999999887543 4 1 2468
Q ss_pred EEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHH
Q 008324 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (570)
Q Consensus 157 ~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+|.+||....... +....|+.||+
T Consensus 134 IVnisS~~~~~g~--------------------------------------------------------~~~~~Y~asKa 157 (247)
T 4hp8_A 134 VVNIASLLSFQGG--------------------------------------------------------IRVPSYTAAKH 157 (247)
T ss_dssp EEEECCGGGTSCC--------------------------------------------------------SSCHHHHHHHH
T ss_pred EEEEechhhCCCC--------------------------------------------------------CCChHHHHHHH
Confidence 9999997543211 11346999999
Q ss_pred HHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHH
Q 008324 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (570)
Q Consensus 237 ~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~a 311 (570)
....+.+.. ..++++..|-|+.|-.+..+.. .........+....+. .-+--.+|+|++
T Consensus 158 av~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~-------~~~~~~~~~~~~~~Pl---------gR~g~peeiA~~ 221 (247)
T 4hp8_A 158 GVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEAL-------RADAARNKAILERIPA---------GRWGHSEDIAGA 221 (247)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH-------HTSHHHHHHHHTTCTT---------SSCBCTHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhc-------ccCHHHHHHHHhCCCC---------CCCcCHHHHHHH
Confidence 988887754 5689999999999876543210 0001111122221110 112346899999
Q ss_pred HHHHHHHhhCCCCCCceEEecCC
Q 008324 312 MIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++.++.+.+.- -.++++.+.+|
T Consensus 222 v~fLaSd~a~~-iTG~~i~VDGG 243 (247)
T 4hp8_A 222 AVFLSSAAADY-VHGAILNVDGG 243 (247)
T ss_dssp HHHHTSGGGTT-CCSCEEEESTT
T ss_pred HHHHhCchhcC-CcCCeEEECcc
Confidence 99887643322 23778888765
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=2.5e-13 Score=146.96 Aligned_cols=167 Identities=16% Similarity=0.178 Sum_probs=125.2
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
|+++|||||+|+||.++++.|++.|. .+|+++.|+.......+.+.+++ .. ...++.++.
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga--~~vvl~~R~~~~~~~~~~l~~~l---------~~---------~g~~v~~~~ 298 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGA--AHLVLTSRRGADAPGAAELRAEL---------EQ---------LGVRVTIAA 298 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTC--SEEEEEESSGGGSTTHHHHHHHH---------HH---------TTCEEEEEE
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCC--cEEEEEeCCCCChHHHHHHHHHH---------Hh---------cCCeEEEEE
Confidence 48999999999999999999999884 47888888754433333333222 11 135789999
Q ss_pred ccCCCCCCCCCchhhHHHHhC------CccEEEEcCccC-Cc-------cccHHHHHHHhHHHHHHHHHHHHHccCceEE
Q 008324 92 GDISSEDLGLKDSNLKEELWN------ELDIMVNSAAIT-KF-------DERYDVAFGINTLGVIHLVNFAKKCVKLKVF 157 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~------~vdiViH~AA~v-~f-------~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~ 157 (570)
+|+++ .+..+.+++ .+|+|||+||.. .. .+.++..+++|+.|+.++.+++... .+.+|
T Consensus 299 ~Dvtd-------~~~v~~~~~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~-~~~~i 370 (496)
T 3mje_A 299 CDAAD-------REALAALLAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL-DLDAF 370 (496)
T ss_dssp CCTTC-------HHHHHHHHHTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS-CCSEE
T ss_pred ccCCC-------HHHHHHHHHHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc-CCCEE
Confidence 99994 444455554 489999999986 22 2346778999999999999999886 77899
Q ss_pred EEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHH
Q 008324 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (570)
Q Consensus 158 V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~ 237 (570)
|++||....-.. .....|+.+|+.
T Consensus 371 V~~SS~a~~~g~--------------------------------------------------------~g~~~YaAaKa~ 394 (496)
T 3mje_A 371 VLFSSGAAVWGS--------------------------------------------------------GGQPGYAAANAY 394 (496)
T ss_dssp EEEEEHHHHTTC--------------------------------------------------------TTCHHHHHHHHH
T ss_pred EEEeChHhcCCC--------------------------------------------------------CCcHHHHHHHHH
Confidence 999997543211 113579999999
Q ss_pred HHHHHHHh-ccCCcEEEEecCceecC
Q 008324 238 GEMLMQQS-KENLSLVIIRPTVVSGT 262 (570)
Q Consensus 238 aE~lv~~~-~~~lp~~IvRPsiV~g~ 262 (570)
.+.+..+. ..+++++.|.|+.+.++
T Consensus 395 ldala~~~~~~Gi~v~sV~pG~w~~~ 420 (496)
T 3mje_A 395 LDALAEHRRSLGLTASSVAWGTWGEV 420 (496)
T ss_dssp HHHHHHHHHHTTCCCEEEEECEESSS
T ss_pred HHHHHHHHHhcCCeEEEEECCcccCC
Confidence 99998876 56899999999988654
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=4.2e-13 Score=132.13 Aligned_cols=207 Identities=13% Similarity=0.131 Sum_probs=141.4
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|+||||++-||++++++|++.| .+|++..|+++ ++. ++ .++ ..++.++.
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~G---a~V~~~~~~~~------~~~-~~---------~~~---------~~~~~~~~ 53 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAG---DKVCFIDIDEK------RSA-DF---------AKE---------RPNLFYFH 53 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHH------HHH-HH---------HTT---------CTTEEEEE
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCC---CEEEEEeCCHH------HHH-HH---------HHh---------cCCEEEEE
Confidence 5899999999999999999999999 67888888642 111 11 111 25788999
Q ss_pred ccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc--cCce
Q 008324 92 GDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--VKLK 155 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~--~~l~ 155 (570)
+|++++ +..+.+ +.++|++||+||.... .+.++..+++|+.|+..+.+++... ++-.
T Consensus 54 ~Dv~~~-------~~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G 126 (247)
T 3ged_A 54 GDVADP-------LTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKG 126 (247)
T ss_dssp CCTTSH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC
T ss_pred ecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCC
Confidence 999953 333333 3469999999987542 2567888999999999998887653 2336
Q ss_pred EEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHH
Q 008324 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (570)
Q Consensus 156 ~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
++|.+||....... +....|+.||
T Consensus 127 ~IInisS~~~~~~~--------------------------------------------------------~~~~~Y~asK 150 (247)
T 3ged_A 127 RIINIASTRAFQSE--------------------------------------------------------PDSEAYASAK 150 (247)
T ss_dssp EEEEECCGGGTSCC--------------------------------------------------------TTCHHHHHHH
T ss_pred cEEEEeecccccCC--------------------------------------------------------CCCHHHHHHH
Confidence 89999987543211 1134699999
Q ss_pred HHHHHHHHHh----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHH
Q 008324 236 TMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (570)
Q Consensus 236 ~~aE~lv~~~----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~a 311 (570)
+..+.+.+.. .+++++..|-||.|-.+..+. +.+ ..... . |. .-+.-.+|+|++
T Consensus 151 aal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~---~~~------~~~~~----~----Pl-----~R~g~pediA~~ 208 (247)
T 3ged_A 151 GGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQE---FTQ------EDCAA----I----PA-----GKVGTPKDISNM 208 (247)
T ss_dssp HHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC------CCH------HHHHT----S----TT-----SSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHH---HHH------HHHhc----C----CC-----CCCcCHHHHHHH
Confidence 9888887654 568999999999986654321 111 11111 1 10 113456899999
Q ss_pred HHHHHHHhhCCCCCCceEEecCC
Q 008324 312 MIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 312 ii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++.++.+ .--.|+++.+.+|
T Consensus 209 v~fL~s~---~~iTG~~i~VDGG 228 (247)
T 3ged_A 209 VLFLCQQ---DFITGETIIVDGG 228 (247)
T ss_dssp HHHHHHC---SSCCSCEEEESTT
T ss_pred HHHHHhC---CCCCCCeEEECcC
Confidence 9988852 2223788988877
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.49 E-value=8.4e-13 Score=131.01 Aligned_cols=222 Identities=16% Similarity=0.078 Sum_probs=145.4
Q ss_pred cCCCEEEEECCcc--hhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 10 LENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaTG--FlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||+++||||+| -||+++++.|++.| .+|++..|+..... .+.+++ ++. -..++
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~~G---a~Vvi~~r~~~~~~---~~~~~~----------~~~-------~~~~~ 60 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQLG---AKLVFTYRKERSRK---ELEKLL----------EQL-------NQPEA 60 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHHTT---CEEEEEESSGGGHH---HHHHHH----------GGG-------TCSSC
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCC---CEEEEEECCHHHHH---HHHHHH----------Hhc-------CCCcE
Confidence 6899999999887 79999999999999 67888888754432 222111 111 12478
Q ss_pred EEEeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc-------c----ccHHHHHHHhHHHHHHHHHHHH
Q 008324 88 TFVPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------D----ERYDVAFGINTLGVIHLVNFAK 149 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f-------~----~~~~~~~~~Nv~gt~~ll~la~ 149 (570)
.++.+|++++ +..+.+ +.++|+++|+||.... . +.+...+++|+.++..+.+.+.
T Consensus 61 ~~~~~Dv~~~-------~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~ 133 (256)
T 4fs3_A 61 HLYQIDVQSD-------EEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAK 133 (256)
T ss_dssp EEEECCTTCH-------HHHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred EEEEccCCCH-------HHHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999953 322233 3469999999996532 1 2345567899999998888776
Q ss_pred Hc-cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 008324 150 KC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (570)
Q Consensus 150 ~~-~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
.. ++-.++|.+||....... +..
T Consensus 134 ~~~~~~G~IVnisS~~~~~~~--------------------------------------------------------~~~ 157 (256)
T 4fs3_A 134 KLMPEGGSIVATTYLGGEFAV--------------------------------------------------------QNY 157 (256)
T ss_dssp TTCTTCEEEEEEECGGGTSCC--------------------------------------------------------TTT
T ss_pred HHhccCCEEEEEeccccccCc--------------------------------------------------------ccc
Confidence 53 344689999986432211 123
Q ss_pred chHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeee
Q 008324 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.. ..++++..|.|+.|-.+..+...+ .......+.... |. .-+.
T Consensus 158 ~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~-------~~~~~~~~~~~~----Pl-----~R~g 221 (256)
T 4fs3_A 158 NVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGG-------FNTILKEIKERA----PL-----KRNV 221 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTT-------HHHHHHHHHHHS----TT-----SSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccC-------CHHHHHHHHhcC----CC-----CCCc
Confidence 57999999888887654 458999999999987754432211 112222221111 10 0123
Q ss_pred ehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
..+|+|++++.++.+.+.- -.|+++.+.+|
T Consensus 222 ~peevA~~v~fL~Sd~a~~-iTG~~i~VDGG 251 (256)
T 4fs3_A 222 DQVEVGKTAAYLLSDLSSG-VTGENIHVDSG 251 (256)
T ss_dssp CHHHHHHHHHHHHSGGGTT-CCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCchhcC-ccCCEEEECcC
Confidence 5689999999888643322 23788888776
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=3.4e-13 Score=134.08 Aligned_cols=219 Identities=14% Similarity=0.141 Sum_probs=141.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++-||+++++.|++.| .+|++..|++... ..+...
T Consensus 9 L~GK~alVTGas~GIG~aia~~la~~G---a~V~~~~r~~~~~-------------------------------~~~~~~ 54 (261)
T 4h15_A 9 LRGKRALITAGTKGAGAATVSLFLELG---AQVLTTARARPEG-------------------------------LPEELF 54 (261)
T ss_dssp CTTCEEEESCCSSHHHHHHHHHHHHTT---CEEEEEESSCCTT-------------------------------SCTTTE
T ss_pred CCCCEEEEeccCcHHHHHHHHHHHHcC---CEEEEEECCchhC-------------------------------CCcEEE
Confidence 689999999999999999999999999 7888999975421 122336
Q ss_pred EeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCC-----c----cccHHHHHHHhHHHHHHHHHHHHH-c-
Q 008324 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITK-----F----DERYDVAFGINTLGVIHLVNFAKK-C- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~-----f----~~~~~~~~~~Nv~gt~~ll~la~~-~- 151 (570)
+.+|++++ +..+.+ +..+|++||+||... + .+.++..+++|+.|+..+.+.+.. |
T Consensus 55 ~~~Dv~~~-------~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~ 127 (261)
T 4h15_A 55 VEADLTTK-------EGCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMV 127 (261)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhh
Confidence 88999953 323332 346999999998642 2 245778899999999999887754 2
Q ss_pred -cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+-.++|.+||........ .....
T Consensus 128 ~~~~G~Iv~isS~~~~~~~~-------------------------------------------------------~~~~~ 152 (261)
T 4h15_A 128 ARGSGVVVHVTSIQRVLPLP-------------------------------------------------------ESTTA 152 (261)
T ss_dssp HHTCEEEEEECCGGGTSCCT-------------------------------------------------------TTCHH
T ss_pred hcCCceEEEEEehhhccCCC-------------------------------------------------------CccHH
Confidence 2446899999864321100 11356
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccc-----cCccchHHHHHHHhcCCceeeecCCCeee
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWV-----EDLKTINTLFVASAQGNLRCLVGETKVIM 300 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~-----~~~~~~~~~i~~~~~G~~~~~~~~~~~~~ 300 (570)
|+.||+..+.+.+.. ..++++..|.||.|-.+......... .........+....... | ..
T Consensus 153 Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----P-----lg 223 (261)
T 4h15_A 153 YAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGI----P-----LG 223 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCC----T-----TS
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCC----C-----CC
Confidence 999999888887654 45899999999988664221000000 00000111111111111 1 01
Q ss_pred eeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 301 d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
-+.-.+|+|++++.++.+.+.- -.|+++++.+|
T Consensus 224 R~g~peevA~~v~fLaS~~a~~-itG~~i~VDGG 256 (261)
T 4h15_A 224 RPAKPEEVANLIAFLASDRAAS-ITGAEYTIDGG 256 (261)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhCchhcC-ccCcEEEECCc
Confidence 1345789999999888643322 23788888776
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.46 E-value=9.7e-13 Score=143.70 Aligned_cols=226 Identities=15% Similarity=0.118 Sum_probs=148.3
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEE-EcCCCc----------ccHHHHHHHHHhhhhhHHHHHhhhc
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF-VRAADI----------DSAALRFQNEVLAKDVFNVLKEKWG 76 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~l-vR~~~~----------~~~~~rl~~~l~~~~~f~~l~~~~~ 76 (570)
.+-.|++++||||+|.||.++++.|++.|. ..|+++ .|+... ....+.+.++ +++.
T Consensus 247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~--~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~---------l~~~-- 313 (525)
T 3qp9_A 247 WWQADGTVLVTGAEEPAAAEAARRLARDGA--GHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAE---------LADL-- 313 (525)
T ss_dssp SSCTTSEEEESSTTSHHHHHHHHHHHHHTC--CEEEEEECCCC---------------CHHHHHH---------HHHH--
T ss_pred eecCCCEEEEECCCCcHHHHHHHHHHHcCC--CEEEEEeCCCCCCccccccccccCHHHHHHHHH---------HHhc--
Confidence 356789999999999999999999999984 346666 776432 1111121111 1111
Q ss_pred cccccccCCceEEEeccCCCCCCCCCchhhHHHHhC------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHH
Q 008324 77 TRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWN------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIH 143 (570)
Q Consensus 77 ~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ 143 (570)
..++.++.+|++ +.+..+.+++ .+|+|||+||.... .+.++..+++|+.|+.+
T Consensus 314 -------g~~v~~~~~Dvt-------d~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~ 379 (525)
T 3qp9_A 314 -------GATATVVTCDLT-------DAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALH 379 (525)
T ss_dssp -------TCEEEEEECCTT-------SHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHH
T ss_pred -------CCEEEEEECCCC-------CHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHH
Confidence 357899999999 4444555554 47999999997642 24467789999999999
Q ss_pred HHHHHHHcc---C-ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccc
Q 008324 144 LVNFAKKCV---K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGT 219 (570)
Q Consensus 144 ll~la~~~~---~-l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 219 (570)
+.+++.... + ..+||++||.......
T Consensus 380 L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~-------------------------------------------------- 409 (525)
T 3qp9_A 380 LDRLLREAAAAGGRPPVLVLFSSVAAIWGG-------------------------------------------------- 409 (525)
T ss_dssp HHHHHHHTC----CCCEEEEEEEGGGTTCC--------------------------------------------------
T ss_pred HHHHhccccccCCCCCEEEEECCHHHcCCC--------------------------------------------------
Confidence 999998752 1 7899999997543221
Q ss_pred cccccCCCCchHHHHHHHHHHHHHHh-ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCe
Q 008324 220 ERAKLHGWPNTYVFTKTMGEMLMQQS-KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKV 298 (570)
Q Consensus 220 ~~~~~~~~~n~Y~~sK~~aE~lv~~~-~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~ 298 (570)
.....|+.+|+..+.+..+. ..+++++.|.|+.+-+. .... ......+. ..|
T Consensus 410 ------~g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~~tg-------m~~~-~~~~~~~~--~~g----------- 462 (525)
T 3qp9_A 410 ------AGQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPWEGS-------RVTE-GATGERLR--RLG----------- 462 (525)
T ss_dssp ------TTCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCBTTS-------GGGS-SHHHHHHH--HTT-----------
T ss_pred ------CCCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccc-------cccc-hhhHHHHH--hcC-----------
Confidence 11357999999999987665 55899999999988221 1111 01111111 111
Q ss_pred eeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHh
Q 008324 299 IMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGF 349 (570)
Q Consensus 299 ~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~ 349 (570)
...++.+++++++..++.... . ..+.. .+.|..+.....
T Consensus 463 -~~~l~pee~a~~l~~~l~~~~-----~--~v~v~----~~dw~~~~~~~~ 501 (525)
T 3qp9_A 463 -LRPLAPATALTALDTALGHGD-----T--AVTIA----DVDWSSFAPGFT 501 (525)
T ss_dssp -BCCBCHHHHHHHHHHHHHHTC-----S--EEEEC----CBCHHHHHHHHH
T ss_pred -CCCCCHHHHHHHHHHHHhCCC-----C--eEEEE----eCCHHHHHhhcc
Confidence 124788999999998886321 1 22222 477887776543
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=1.9e-12 Score=131.06 Aligned_cols=238 Identities=13% Similarity=0.098 Sum_probs=138.0
Q ss_pred cCCCEEEEECCc--chhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 10 LENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaT--GFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||+++||||+ |+||++++++|++.| .+|+++.|+.......+... ..-.+.+. +.... ...+..
T Consensus 6 l~~k~~lVTGas~~~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~-~~~~~---~~~~~~ 73 (297)
T 1d7o_A 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAG---AEILVGTWVPALNIFETSLR-----RGKFDQSR-VLPDG---SLMEIK 73 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHTT---CEEEEEEEHHHHHHHHHHHH-----TTTTTGGG-BCTTS---SBCCEE
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCC---CeEEEeeccccchhhhhhhh-----hhHhhhhh-hhccc---cccccc
Confidence 679999999999 999999999999998 67888876421000000000 00000000 00000 000112
Q ss_pred EEEeccC--------CC------------CCCCCCchhhHHHH---hCCccEEEEcCccCC-----c----cccHHHHHH
Q 008324 88 TFVPGDI--------SS------------EDLGLKDSNLKEEL---WNELDIMVNSAAITK-----F----DERYDVAFG 135 (570)
Q Consensus 88 ~~v~gDl--------~~------------~~lgls~~~~~~~l---~~~vdiViH~AA~v~-----f----~~~~~~~~~ 135 (570)
..+.+|+ +. ++ +-....+.+ ...+|++||+||... + .+.++..++
T Consensus 74 ~~~~~~~~~~~~~dv~~Dv~~~~~~~~~~~~---~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~ 150 (297)
T 1d7o_A 74 KVYPLDAVFDNPEDVPEDVKANKRYAGSSNW---TVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAIS 150 (297)
T ss_dssp EEEEECTTCCSGGGSCHHHHTSHHHHHCCCC---SHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHH
T ss_pred cccccceeccchhhhhhhhhccccccccCHH---HHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHH
Confidence 3333332 21 10 011111122 247999999998531 2 234677899
Q ss_pred HhHHHHHHHHHHHHHc-cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHH
Q 008324 136 INTLGVIHLVNFAKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFM 214 (570)
Q Consensus 136 ~Nv~gt~~ll~la~~~-~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (570)
+|+.|+.++++++... ..-.++|++||........
T Consensus 151 vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~-------------------------------------------- 186 (297)
T 1d7o_A 151 ASSYSFVSLLSHFLPIMNPGGASISLTYIASERIIP-------------------------------------------- 186 (297)
T ss_dssp HHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCT--------------------------------------------
T ss_pred HhhhHHHHHHHHHHHHhccCceEEEEeccccccCCC--------------------------------------------
Confidence 9999999999998763 2225899999875432110
Q ss_pred hhccccccccCCCCchHHHHHHHHHHHHHHh----c--cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCC
Q 008324 215 KNLGTERAKLHGWPNTYVFTKTMGEMLMQQS----K--ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGN 288 (570)
Q Consensus 215 ~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~----~--~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~ 288 (570)
++...|+.||+..+.+.+.. . .++++..++|+.|.++..... ..............
T Consensus 187 -----------~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~~ 248 (297)
T 1d7o_A 187 -----------GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI-------GFIDTMIEYSYNNA 248 (297)
T ss_dssp -----------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC-------SHHHHHHHHHHHHS
T ss_pred -----------CcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhc-------cccHHHHHHhhccC
Confidence 11146999999999887754 2 589999999999988754321 00111111111111
Q ss_pred ceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 289 LRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 289 ~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+ ...+...+|+|++++.++..... .-.++++++.++
T Consensus 249 ----p-----~~r~~~pedvA~~v~~l~s~~~~-~itG~~i~vdgG 284 (297)
T 1d7o_A 249 ----P-----IQKTLTADEVGNAAAFLVSPLAS-AITGATIYVDNG 284 (297)
T ss_dssp ----S-----SCCCBCHHHHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred ----C-----CCCCCCHHHHHHHHHHHhCcccc-CCCCCEEEECCC
Confidence 0 11245789999999888753322 223789999887
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=3.4e-14 Score=146.29 Aligned_cols=177 Identities=14% Similarity=0.052 Sum_probs=112.8
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCC----CccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQP----NVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~----~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.++|+||||+||||++++..|+..+. .+.+|.++.+..... ..+....++. ...+
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~-~~~g~~~dl~--------------------~~~~ 62 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMK-ALEGVVMELE--------------------DCAF 62 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHH-HHHHHHHHHH--------------------TTTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchh-hccchhhhhh--------------------cccc
Confidence 46899999999999999999998763 123788877653111 0011000110 0011
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCce-EEEEEecce-
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLK-VFVHVSTAY- 164 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~-~~V~vSTa~- 164 (570)
.++ +|+. +.+.....++++|+|||+||..+- ..+....++.|+.+|+++++.+++..+.+ +++++|+..
T Consensus 63 ~~~-~di~-------~~~~~~~a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~ 134 (327)
T 1y7t_A 63 PLL-AGLE-------ATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPAN 134 (327)
T ss_dssp TTE-EEEE-------EESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHH
T ss_pred ccc-CCeE-------eccChHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchh
Confidence 122 5665 222234667899999999998653 34556789999999999999999862143 666666431
Q ss_pred eecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHH
Q 008324 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (570)
Q Consensus 165 v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~ 244 (570)
+.. .+.++.. +. .++.+.|+.||..+|++...
T Consensus 135 ~~~----~~~~~~~---~~-----------------------------------------~~p~~~yg~tkl~~er~~~~ 166 (327)
T 1y7t_A 135 TNA----LIAYKNA---PG-----------------------------------------LNPRNFTAMTRLDHNRAKAQ 166 (327)
T ss_dssp HHH----HHHHHTC---TT-----------------------------------------SCGGGEEECCHHHHHHHHHH
T ss_pred hhH----HHHHHHc---CC-----------------------------------------CChhheeccchHHHHHHHHH
Confidence 000 0000000 00 02335799999999998876
Q ss_pred h--ccCCcEEEEecCceecCCCC
Q 008324 245 S--KENLSLVIIRPTVVSGTYKE 265 (570)
Q Consensus 245 ~--~~~lp~~IvRPsiV~g~~~e 265 (570)
+ ..+++.+++||+.|||+..+
T Consensus 167 ~a~~~g~~~~~vr~~~V~G~h~~ 189 (327)
T 1y7t_A 167 LAKKTGTGVDRIRRMTVWGNHSS 189 (327)
T ss_dssp HHHHHTCCGGGEECCEEEBCSST
T ss_pred HHHHhCcChhheeeeEEEcCCCC
Confidence 5 34899999999999998653
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.33 E-value=3.9e-12 Score=141.64 Aligned_cols=210 Identities=12% Similarity=0.105 Sum_probs=128.7
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC------cccHHHHHHHHHhhhhhHHHHHhhhcccccc
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD------IDSAALRFQNEVLAKDVFNVLKEKWGTRLNS 81 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~------~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~ 81 (570)
.-++||+++||||+|+||+++++.|++.| .+|+++.|... .....+.+.++ ++..
T Consensus 15 ~~l~gk~~lVTGas~GIG~aiA~~La~~G---a~Vv~~~r~~~~~~~~~~~~~~~~~~~~---------i~~~------- 75 (613)
T 3oml_A 15 LRYDGRVAVVTGAGAGLGREYALLFAERG---AKVVVNDLGGTHSGDGASQRAADIVVDE---------IRKA------- 75 (613)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEC--------------CHHHHHHH---------HHHT-------
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCcccccccCCHHHHHHHHHH---------HHHh-------
Confidence 44789999999999999999999999999 67888877221 11111111111 1111
Q ss_pred ccCCceEEEeccCCCCCCCCCchhhHHHHhC-------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHH
Q 008324 82 FISEKITFVPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNF 147 (570)
Q Consensus 82 ~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~l 147 (570)
... +.+|+++. +..+.+++ .+|++||+||.... .+.++..+++|+.|+.+++++
T Consensus 76 --~~~---~~~D~~d~-------~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~ 143 (613)
T 3oml_A 76 --GGE---AVADYNSV-------IDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQA 143 (613)
T ss_dssp --TCC---EEECCCCG-------GGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCe---EEEEeCCH-------HHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 112 23688853 22233333 58999999997642 245778899999999999998
Q ss_pred HHH-c--cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhcccccccc
Q 008324 148 AKK-C--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKL 224 (570)
Q Consensus 148 a~~-~--~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 224 (570)
+.. + .+..++|++||.......
T Consensus 144 ~~p~m~~~~~g~IV~isS~a~~~~~------------------------------------------------------- 168 (613)
T 3oml_A 144 AFPYMKKQNYGRIIMTSSNSGIYGN------------------------------------------------------- 168 (613)
T ss_dssp HHHHHHTTTCEEEEEECCHHHHHCC-------------------------------------------------------
T ss_pred HHHHHHHcCCCEEEEECCHHHcCCC-------------------------------------------------------
Confidence 843 2 245789999997533211
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCee
Q 008324 225 HGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVI 299 (570)
Q Consensus 225 ~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~ 299 (570)
.....|+.||+..+.+.+.. ..++.+..+.|+.+..... ++.. . ..
T Consensus 169 -~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~~~~----~~~~-----~-------------------~~ 219 (613)
T 3oml_A 169 -FGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRMTE----GILP-----D-------------------IL 219 (613)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------C----CCCC-----H-------------------HH
T ss_pred -CCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCChhhh----hccc-----h-------------------hh
Confidence 11356999999999888754 4589999999986532111 0000 0 01
Q ss_pred eeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 300 MDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 300 ~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
...+..+++|++++.++... ....++++++.+|
T Consensus 220 ~~~~~pedvA~~v~~L~s~~--~~~tG~~i~vdGG 252 (613)
T 3oml_A 220 FNELKPKLIAPVVAYLCHES--CEDNGSYIESAAG 252 (613)
T ss_dssp HTTCCGGGTHHHHHHTTSTT--CCCCSCEEEEETT
T ss_pred hhcCCHHHHHHHHHHhcCCC--cCCCceEEEECCC
Confidence 12236789999998877533 2224778887766
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.30 E-value=2.2e-11 Score=124.58 Aligned_cols=249 Identities=13% Similarity=0.033 Sum_probs=120.5
Q ss_pred cCCCEEEEECC--cchhHHHHHHHHHHhCCCccEEEEEEcCC--------CcccHHHHHHHHHhhh---hhHHHHHhhhc
Q 008324 10 LENKTILVSGV--TGFVAKVFIEKILRVQPNVKKLYLFVRAA--------DIDSAALRFQNEVLAK---DVFNVLKEKWG 76 (570)
Q Consensus 10 ~~~k~VlITGa--TGFlG~~LvekLl~~~~~V~~V~~lvR~~--------~~~~~~~rl~~~l~~~---~~f~~l~~~~~ 76 (570)
++||+++|||| +|+||++++++|++.| .+|+++.|+. ......+... ++... .+-+.+++..+
T Consensus 7 l~~k~~lVTGa~~s~GIG~aia~~la~~G---~~Vv~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 82 (319)
T 2ptg_A 7 LRGKTAFVAGVADSNGYGWAICKLLRAAG---ARVLVGTWPPVYSIFKKGLESSRFEQDS-FYAQEPSSKVAAEAAEKPV 82 (319)
T ss_dssp CTTCEEEEECCCCTTSHHHHHHHHHHHTT---CEEEEEECHHHHHHHHC-------------------------------
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHCC---CEEEEEeccccccchhhhhhhhhhhhhh-hhhcchhhhHHHHhhhccc
Confidence 67999999999 8999999999999998 6788887642 0000000000 00000 00011111000
Q ss_pred cccccccCCceEEEecc--CCCCC-CC--C------------CchhhHHHH---hCCccEEEEcCccCC-----c----c
Q 008324 77 TRLNSFISEKITFVPGD--ISSED-LG--L------------KDSNLKEEL---WNELDIMVNSAAITK-----F----D 127 (570)
Q Consensus 77 ~~~~~~~~~kv~~v~gD--l~~~~-lg--l------------s~~~~~~~l---~~~vdiViH~AA~v~-----f----~ 127 (570)
. ......+.+| ++++. +- + +-....+.+ +..+|++||+||... + .
T Consensus 83 ~------~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~ 156 (319)
T 2ptg_A 83 D------LVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSR 156 (319)
T ss_dssp --------CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCH
T ss_pred c------ccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCH
Confidence 0 0012334333 22221 00 0 011111222 247999999998541 2 2
Q ss_pred ccHHHHHHHhHHHHHHHHHHHHHc-cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCC
Q 008324 128 ERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAP 206 (570)
Q Consensus 128 ~~~~~~~~~Nv~gt~~ll~la~~~-~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 206 (570)
+.++..+++|+.|+.++++.+... ..-.++|++||........
T Consensus 157 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~------------------------------------ 200 (319)
T 2ptg_A 157 KGYLAAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIP------------------------------------ 200 (319)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC------------------------------------------
T ss_pred HHHHHHHhHhhHHHHHHHHHHHHHHhcCceEEEEeccccccccC------------------------------------
Confidence 346778999999999999998753 2226899999875432110
Q ss_pred hhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh----c--cCCcEEEEecCceecCCCCCCCccccCccchHHH
Q 008324 207 QKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS----K--ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTL 280 (570)
Q Consensus 207 ~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~----~--~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~ 280 (570)
++...|+.||+..+.+.+.. . .++.+..++|+.|.++.....+. . .....
T Consensus 201 -------------------~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~---~--~~~~~ 256 (319)
T 2ptg_A 201 -------------------GYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGK---A--GDKTF 256 (319)
T ss_dssp -------------------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC--------------------
T ss_pred -------------------ccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhhhhccc---c--cchhh
Confidence 11146999998888877643 2 58999999999987754321110 0 00000
Q ss_pred HHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 281 FVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 281 i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
..... ..+ ........+...+++|++++.++..... .-.++++.+.+|
T Consensus 257 ~~~~~----~~~-~~~~p~~r~~~peevA~~v~~L~s~~~~-~itG~~i~vdGG 304 (319)
T 2ptg_A 257 IDLAI----DYS-EANAPLQKELESDDVGRAALFLLSPLAR-AVTGATLYVDNG 304 (319)
T ss_dssp ---------------------CCCHHHHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHH----HHH-hccCCCCCCCCHHHHHHHHHHHhCcccC-CccCCEEEECCC
Confidence 00000 000 0000112346789999999988753322 223788888877
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.25 E-value=1.4e-10 Score=119.21 Aligned_cols=185 Identities=10% Similarity=0.047 Sum_probs=115.9
Q ss_pred CCCEEEEECCcc--hhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccc-cccccCCce
Q 008324 11 ENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTR-LNSFISEKI 87 (570)
Q Consensus 11 ~~k~VlITGaTG--FlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~-~~~~~~~kv 87 (570)
++|+++||||++ .||++++++|++.| .+|++..|+.... ...|-. ++++...... ........+
T Consensus 1 ~~k~~lITGas~~~GIG~aiA~~la~~G---~~Vv~~~~~~~~~-l~~r~~---------~~~~~~~~~~~~~~~~~~~~ 67 (329)
T 3lt0_A 1 NEDICFIAGIGDTNGYGWGIAKELSKRN---VKIIFGIWPPVYN-IFMKNY---------KNGKFDNDMIIDKDKKMNIL 67 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTT---CEEEEEECHHHHH-HHHHHH---------HTTTTTGGGBCSSSCBCCEE
T ss_pred CCcEEEEECCCCCCchHHHHHHHHHHCC---CEEEEEecCcccc-ccccch---------HHHHHHHHHHHhhccccccc
Confidence 479999999875 89999999999999 6778776643100 000100 0000000000 000012457
Q ss_pred EEEeccCCCCCCC-------------CCchhhHHHH-------hCCccEEEEcCccC-----Cc----cccHHHHHHHhH
Q 008324 88 TFVPGDISSEDLG-------------LKDSNLKEEL-------WNELDIMVNSAAIT-----KF----DERYDVAFGINT 138 (570)
Q Consensus 88 ~~v~gDl~~~~lg-------------ls~~~~~~~l-------~~~vdiViH~AA~v-----~f----~~~~~~~~~~Nv 138 (570)
.++.+|+++.... +++.+..+.+ ...+|++||+||.. .+ .+.++..+++|+
T Consensus 68 ~~~~~Dv~~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~ 147 (329)
T 3lt0_A 68 DMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSS 147 (329)
T ss_dssp EEEECCTTCSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHT
T ss_pred ccccccccccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHh
Confidence 8899999976211 1111122222 24699999999863 11 244677899999
Q ss_pred HHHHHHHHHHHH-ccCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhc
Q 008324 139 LGVIHLVNFAKK-CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNL 217 (570)
Q Consensus 139 ~gt~~ll~la~~-~~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (570)
.|+..+.+.+.. +..-.++|++||.......
T Consensus 148 ~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~------------------------------------------------ 179 (329)
T 3lt0_A 148 YSLISLCKYFVNIMKPQSSIISLTYHASQKVV------------------------------------------------ 179 (329)
T ss_dssp HHHHHHHHHHGGGEEEEEEEEEEECGGGTSCC------------------------------------------------
T ss_pred HHHHHHHHHHHHHHhhCCeEEEEeCccccCCC------------------------------------------------
Confidence 999999998875 3222589999987533211
Q ss_pred cccccccCCCC-chHHHHHHHHHHHHHHh-----c-cCCcEEEEecCceecCCC
Q 008324 218 GTERAKLHGWP-NTYVFTKTMGEMLMQQS-----K-ENLSLVIIRPTVVSGTYK 264 (570)
Q Consensus 218 g~~~~~~~~~~-n~Y~~sK~~aE~lv~~~-----~-~~lp~~IvRPsiV~g~~~ 264 (570)
+.. ..|+.||+..+.+.+.. . .++.+..+.||.|-.+..
T Consensus 180 --------~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~ 225 (329)
T 3lt0_A 180 --------PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAA 225 (329)
T ss_dssp --------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHH
T ss_pred --------CcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhH
Confidence 112 27999999888887643 3 589999999999876543
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=4.7e-11 Score=121.96 Aligned_cols=247 Identities=14% Similarity=0.053 Sum_probs=135.9
Q ss_pred cCCCEEEEECC--cchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 10 LENKTILVSGV--TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGa--TGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||+++|||| +|+||++++++|++.| .+|+++.|+... .+..+. ....-.+.+.+ .... .....+
T Consensus 7 l~gk~~lVTGa~~s~GIG~aia~~la~~G---~~Vv~~~r~~~~----~~~~~~-~~~~~~~~~~~-~~~~---~~~~~~ 74 (315)
T 2o2s_A 7 LRGQTAFVAGVADSHGYGWAIAKHLASAG---ARVALGTWPPVL----GLFQKS-LQSGRLDEDRK-LPDG---SLIEFA 74 (315)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHTTT---CEEEEEECHHHH----HHHHHH-HHHTTTHHHHB-CTTS---CBCCCS
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHHHCC---CEEEEEeccccc----chhhhh-hhhhhhhhhhh-hhcc---cccccc
Confidence 68999999999 8999999999999998 678888775310 000000 00000011110 0000 000012
Q ss_pred EEEeccC--CCCC-CC-------------C-CchhhHHHH---hCCccEEEEcCccCC-----c----cccHHHHHHHhH
Q 008324 88 TFVPGDI--SSED-LG-------------L-KDSNLKEEL---WNELDIMVNSAAITK-----F----DERYDVAFGINT 138 (570)
Q Consensus 88 ~~v~gDl--~~~~-lg-------------l-s~~~~~~~l---~~~vdiViH~AA~v~-----f----~~~~~~~~~~Nv 138 (570)
..+.+|+ +++. +. . +-....+.+ +..+|++||+||... + .+.++..+++|+
T Consensus 75 ~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~ 154 (315)
T 2o2s_A 75 GVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSA 154 (315)
T ss_dssp CEEECCTTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHT
T ss_pred ccccccccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhh
Confidence 3333332 2221 00 0 011111122 247999999998542 2 244677899999
Q ss_pred HHHHHHHHHHHHc-cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhc
Q 008324 139 LGVIHLVNFAKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNL 217 (570)
Q Consensus 139 ~gt~~ll~la~~~-~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (570)
.|+.++++.+... ..-.++|++||........
T Consensus 155 ~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~----------------------------------------------- 187 (315)
T 2o2s_A 155 YSFVSLLQHFGPIMNEGGSAVTLSYLAAERVVP----------------------------------------------- 187 (315)
T ss_dssp HHHHHHHHHHSTTEEEEEEEEEEEEGGGTSCCT-----------------------------------------------
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecccccccCC-----------------------------------------------
Confidence 9999999998652 2225899999875432110
Q ss_pred cccccccCCCCchHHHHHHHHHHHHHHh----c--cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCcee
Q 008324 218 GTERAKLHGWPNTYVFTKTMGEMLMQQS----K--ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRC 291 (570)
Q Consensus 218 g~~~~~~~~~~n~Y~~sK~~aE~lv~~~----~--~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~ 291 (570)
++...|+.||+..+.+.+.. . .++.+..++|+.|.++.....+..... .............
T Consensus 188 --------~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~---- 254 (315)
T 2o2s_A 188 --------GYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEK-SFIDYAIDYSYNN---- 254 (315)
T ss_dssp --------TCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSS-CHHHHHHHHHHHH----
T ss_pred --------CccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccc-hhHHHHHHHHhcc----
Confidence 12246999999888887643 2 589999999999876432111000000 0000110001000
Q ss_pred eecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 292 LVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 292 ~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.+ ...+...+++|++++.++..... .-.++++.+.+|
T Consensus 255 ~p-----~~r~~~pedvA~~v~~L~s~~~~-~itG~~i~vdGG 291 (315)
T 2o2s_A 255 AP-----LRRDLHSDDVGGAALFLLSPLAR-AVSGVTLYVDNG 291 (315)
T ss_dssp SS-----SCCCCCHHHHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred CC-----CCCCCCHHHHHHHHHHHhCchhc-cCcCCEEEECCC
Confidence 00 01235789999999988753322 223788888776
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.16 E-value=2.1e-10 Score=131.11 Aligned_cols=167 Identities=17% Similarity=0.190 Sum_probs=122.3
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHH-HhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKIL-RVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl-~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
+-.|++++||||+|.||+.+++.|. +.|. ++|+++.|+.......+.+.+++ ++ ...++
T Consensus 527 ~~~~~~~lItGg~~GlG~aiA~~la~~~Ga--~~vvl~~R~~~~~~~~~~~~~~l---------~~---------~G~~v 586 (795)
T 3slk_A 527 WDAAGTVLVTGGTGALGAEVARHLVIERGV--RNLVLVSRRGPAASGAAELVAQL---------TA---------YGAEV 586 (795)
T ss_dssp CCTTSEEEEETTTSHHHHHHHHHHHHTSSC--CEEEEEESSGGGSTTHHHHHHHH---------HH---------TTCEE
T ss_pred cccccceeeccCCCCcHHHHHHHHHHHcCC--cEEEEeccCccchHHHHHHHHHH---------Hh---------cCCcE
Confidence 3468999999999999999999999 6673 46889999854333233322222 11 13578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhC------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHccCc
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELWN------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKCVKL 154 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~~~l 154 (570)
.++.+|+++ .+..+.+++ .+|+|||+|+.... .+.++..+++|+.|+.++.+++. +.+
T Consensus 587 ~~~~~Dvsd-------~~~v~~~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~--~~l 657 (795)
T 3slk_A 587 SLQACDVAD-------RETLAKVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELID--PDV 657 (795)
T ss_dssp EEEECCTTC-------HHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSC--TTS
T ss_pred EEEEeecCC-------HHHHHHHHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHh--hCC
Confidence 999999994 444445543 47999999998642 24577889999999999999883 356
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
+||.+||....-.. .....|+.+
T Consensus 658 -~iV~~SS~ag~~g~--------------------------------------------------------~g~~~YaAa 680 (795)
T 3slk_A 658 -ALVLFSSVSGVLGS--------------------------------------------------------GGQGNYAAA 680 (795)
T ss_dssp -EEEEEEETHHHHTC--------------------------------------------------------SSCHHHHHH
T ss_pred -EEEEEccHHhcCCC--------------------------------------------------------CCCHHHHHH
Confidence 89999997543211 113579999
Q ss_pred HHHHHHHHHHh-ccCCcEEEEecCceec
Q 008324 235 KTMGEMLMQQS-KENLSLVIIRPTVVSG 261 (570)
Q Consensus 235 K~~aE~lv~~~-~~~lp~~IvRPsiV~g 261 (570)
|+..+.+..+. ..+++++.+-||.+-+
T Consensus 681 ka~~~alA~~~~~~Gi~v~sI~pG~v~t 708 (795)
T 3slk_A 681 NSFLDALAQQRQSRGLPTRSLAWGPWAE 708 (795)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCCSC
T ss_pred HHHHHHHHHHHHHcCCeEEEEECCeECc
Confidence 99999888776 5689999999998764
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=1.4e-09 Score=130.76 Aligned_cols=167 Identities=17% Similarity=0.119 Sum_probs=113.4
Q ss_pred cCCCEEEEECCcch-hHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 10 LENKTILVSGVTGF-VAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGF-lG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
++||+|+||||+|. ||.++++.|++.| .+|+++.|..... .+... +.+..+.+. ...++.
T Consensus 650 L~gKvaLVTGASgGgIG~aIAr~LA~~G---A~VVl~~~R~~~~--l~~~a---------~eL~~el~~-----~G~~v~ 710 (1878)
T 2uv9_A 650 FQGKHALMTGAGAGSIGAEVLQGLLSGG---AKVIVTTSRFSRQ--VTEYY---------QGIYARCGA-----RGSQLV 710 (1878)
T ss_dssp CTTCEEEEESCCTTSHHHHHHHHHHHTT---CEEEEEESSCCHH--HHHHH---------HHHHHHHCC-----TTCEEE
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCC---CEEEEEecCChHH--HHHHH---------HHHHHHhhc-----cCCeEE
Confidence 67999999999999 9999999999998 5677775432211 11111 111112111 025688
Q ss_pred EEeccCCCCCCCCCchhhHHHHh----------C-CccEEEEcCccCCcc----------ccHHHHHHHhHHHHHHHHHH
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW----------N-ELDIMVNSAAITKFD----------ERYDVAFGINTLGVIHLVNF 147 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~----------~-~vdiViH~AA~v~f~----------~~~~~~~~~Nv~gt~~ll~l 147 (570)
++.+|+++ .+..+.++ . .+|+|||+||..... +.++..+++|+.|+.+++++
T Consensus 711 ~v~~DVsd-------~esV~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a 783 (1878)
T 2uv9_A 711 VVPFNQGS-------KQDVEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKT 783 (1878)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EEEcCCCC-------HHHHHHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999995 33333333 2 589999999975321 44677899999999999887
Q ss_pred HHHccC-----ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhcccccc
Q 008324 148 AKKCVK-----LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERA 222 (570)
Q Consensus 148 a~~~~~-----l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 222 (570)
++..+. ..+||.+||......
T Consensus 784 ~~~lp~M~~~~~G~IVnISS~ag~~g------------------------------------------------------ 809 (1878)
T 2uv9_A 784 QKKERGYETRPAQVILPLSPNHGTFG------------------------------------------------------ 809 (1878)
T ss_dssp HHHHHTCCSCCEEECCEECSCSSSSS------------------------------------------------------
T ss_pred HHHhHHHHhCCCCEEEEEcchhhccC------------------------------------------------------
Confidence 543322 258999998642211
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCcee
Q 008324 223 KLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVS 260 (570)
Q Consensus 223 ~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~ 260 (570)
....|+.||+..+.++... ...++++.+.||.|-
T Consensus 810 ----g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~ 848 (1878)
T 2uv9_A 810 ----NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTR 848 (1878)
T ss_dssp ----CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBC
T ss_pred ----CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEeccee
Confidence 1246999999999886532 334899999999887
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=1.6e-09 Score=130.64 Aligned_cols=167 Identities=19% Similarity=0.153 Sum_probs=114.6
Q ss_pred cCCCEEEEECCcch-hHHHHHHHHHHhCCCccEEEEEE-cCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 10 LENKTILVSGVTGF-VAKVFIEKILRVQPNVKKLYLFV-RAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaTGF-lG~~LvekLl~~~~~V~~V~~lv-R~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||+++||||+|. ||.++++.|++.| .+|+++. |+.... +.+. +.+.++.+. ...++
T Consensus 673 l~gKvaLVTGASsGgIG~aIA~~La~~G---A~Vvl~~~R~~~~l---~~~~---------~eL~~~~~~-----~g~~v 732 (1887)
T 2uv8_A 673 FKDKYVLITGAGKGSIGAEVLQGLLQGG---AKVVVTTSRFSKQV---TDYY---------QSIYAKYGA-----KGSTL 732 (1887)
T ss_dssp CTTCEEEEESCCSSSHHHHHHHHHHHTT---CEEEEEESSCCHHH---HHHH---------HHHHHHHCC-----TTCEE
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCC---CEEEEEecCCHHHH---HHHH---------HHHHHHhhc-----CCCeE
Confidence 67999999999999 9999999999998 5777774 543211 1111 112222211 02568
Q ss_pred EEEeccCCCCCCCCCchhhHHHHh------------C-CccEEEEcCccCCcc----------ccHHHHHHHhHHHHHHH
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELW------------N-ELDIMVNSAAITKFD----------ERYDVAFGINTLGVIHL 144 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~------------~-~vdiViH~AA~v~f~----------~~~~~~~~~Nv~gt~~l 144 (570)
.++.+|+++ .+..+.++ . .+|++||+||..... +.++..+++|+.|+..+
T Consensus 733 ~~v~~DVsd-------~~sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l 805 (1887)
T 2uv8_A 733 IVVPFNQGS-------KQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGC 805 (1887)
T ss_dssp EEEECCTTC-------HHHHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHH
T ss_pred EEEEecCCC-------HHHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHH
Confidence 899999995 33333332 1 589999999975321 34567789999999999
Q ss_pred HHHHHHccC-----ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccc
Q 008324 145 VNFAKKCVK-----LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGT 219 (570)
Q Consensus 145 l~la~~~~~-----l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 219 (570)
++.++..+. -.++|.+||......
T Consensus 806 ~~a~~~lp~m~~~~~G~IVnISS~ag~~g--------------------------------------------------- 834 (1887)
T 2uv8_A 806 VKKQKSARGIETRPAQVILPMSPNHGTFG--------------------------------------------------- 834 (1887)
T ss_dssp HHHHHHTTTCCSCCEEEEEEECSCTTCSS---------------------------------------------------
T ss_pred HHHHHhhhhhhhCCCCEEEEEcChHhccC---------------------------------------------------
Confidence 998854433 258999998642211
Q ss_pred cccccCCCCchHHHHHHHHHHH-HHHh----ccCCcEEEEecCceec
Q 008324 220 ERAKLHGWPNTYVFTKTMGEML-MQQS----KENLSLVIIRPTVVSG 261 (570)
Q Consensus 220 ~~~~~~~~~n~Y~~sK~~aE~l-v~~~----~~~lp~~IvRPsiV~g 261 (570)
....|+.||+..+.+ .+.. ...+.++.+.||.|-+
T Consensus 835 -------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~t 874 (1887)
T 2uv8_A 835 -------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG 874 (1887)
T ss_dssp -------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEEC
T ss_pred -------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEeccccc
Confidence 124699999999988 3322 2338999999999984
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.01 E-value=6.7e-10 Score=129.84 Aligned_cols=169 Identities=20% Similarity=0.196 Sum_probs=112.0
Q ss_pred cCCCEEEEECCcch-hHHHHHHHHHHhCCCccEEEEE-EcCCCcc-cHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 10 LENKTILVSGVTGF-VAKVFIEKILRVQPNVKKLYLF-VRAADID-SAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 10 ~~~k~VlITGaTGF-lG~~LvekLl~~~~~V~~V~~l-vR~~~~~-~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
++||+++||||+|. ||+++++.|++.| .+|+++ .|+.... ...+. +.++.+. ...+
T Consensus 474 L~GKvALVTGASgGGIGrAIAr~LA~~G---A~VVL~~~R~~e~lee~a~e-------------L~ael~a-----~Ga~ 532 (1688)
T 2pff_A 474 FKDKYVLITGAGKGSIGAEVLQGLLQGG---AKVVVTTSRFSKQVTDYYQS-------------IYAKYGA-----KGST 532 (1688)
T ss_dssp CCSCCEEECSCSSSSTHHHHHHHHHHHT---CEEEEEESSCSTTTTTHHHH-------------TTTTTCC-----TTCE
T ss_pred cCCCEEEEECCChHHHHHHHHHHHHHCc---CEEEEEeCCCHHHHHHHHHH-------------HHHHhhc-----CCCe
Confidence 67999999999999 9999999999999 567777 4544322 11111 1111110 0246
Q ss_pred eEEEeccCCCCCCCCCchh-hHHHHhC---------CccEEEEcCccCCc----------cccHHHHHHHhHHHHHHHHH
Q 008324 87 ITFVPGDISSEDLGLKDSN-LKEELWN---------ELDIMVNSAAITKF----------DERYDVAFGINTLGVIHLVN 146 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~-~~~~l~~---------~vdiViH~AA~v~f----------~~~~~~~~~~Nv~gt~~ll~ 146 (570)
+.++.+|+++++ +.+ ..+.+.+ .+|+|||+||.... .+.++..+++|+.|+.++++
T Consensus 533 V~vV~~DVTD~e----sVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltq 608 (1688)
T 2pff_A 533 LIVVPFNQGSKQ----DVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVK 608 (1688)
T ss_dssp EEEEECCSSSTT----HHHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHH
T ss_pred EEEEEeCCCCHH----HHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 889999999643 111 1112221 58999999997532 13456778999999999999
Q ss_pred HHHHccC-----ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccc
Q 008324 147 FAKKCVK-----LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTER 221 (570)
Q Consensus 147 la~~~~~-----l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 221 (570)
+++..+. -.+||.+||.....
T Consensus 609 aa~~lp~M~krggGrIVnISSiAG~~------------------------------------------------------ 634 (1688)
T 2pff_A 609 KQKSARGIETRPAQVILPMSPNHGTF------------------------------------------------------ 634 (1688)
T ss_dssp HHHHHHTCTTSCEEECCCCCSCTTTS------------------------------------------------------
T ss_pred HHHhChHHHhCCCCEEEEEEChHhcc------------------------------------------------------
Confidence 8844322 25789999863211
Q ss_pred cccCCCCchHHHHHHHHHHHHHH-h----ccCCcEEEEecCceec
Q 008324 222 AKLHGWPNTYVFTKTMGEMLMQQ-S----KENLSLVIIRPTVVSG 261 (570)
Q Consensus 222 ~~~~~~~n~Y~~sK~~aE~lv~~-~----~~~lp~~IvRPsiV~g 261 (570)
+....|+.||+..+.++.+ . ...++++.+.||.|-+
T Consensus 635 ----Gg~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~T 675 (1688)
T 2pff_A 635 ----GGDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG 675 (1688)
T ss_dssp ----SCBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCC
T ss_pred ----CCchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcC
Confidence 0124699999999998433 2 2237788888888874
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=6.5e-09 Score=108.11 Aligned_cols=183 Identities=9% Similarity=-0.063 Sum_probs=113.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHH-hCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILR-VQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~-~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
-.||+++||||++-||.++++.|++ .| .+|+++.|.+........ .....+...+....+.. ..++.
T Consensus 45 ~~gKvaLVTGas~GIG~AiA~~LA~g~G---A~Vv~~~~~~~~~~~~~~-~~gwyn~~~~~~~~~~~--------G~~a~ 112 (405)
T 3zu3_A 45 NGPKRVLVIGASTGYGLAARITAAFGCG---ADTLGVFFERPGEEGKPG-TSGWYNSAAFHKFAAQK--------GLYAK 112 (405)
T ss_dssp TCCSEEEEESCSSHHHHHHHHHHHHHHC---CEEEEEECCCCCBTTBCC-CHHHHHHHHHHHHHHHT--------TCCEE
T ss_pred CCCCEEEEeCcchHHHHHHHHHHHHhcC---CEEEEEeCCchhhhhhcc-cccchhHHHHHHHHHhc--------CCceE
Confidence 3579999999999999999999999 99 677888876644221000 00000000011000111 24678
Q ss_pred EEeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccC----------------Cc-------------------
Q 008324 89 FVPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAIT----------------KF------------------- 126 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v----------------~f------------------- 126 (570)
.+.+|+++ ++..+.+ +..+|++||+||.. .+
T Consensus 113 ~i~~Dvtd-------~~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~ 185 (405)
T 3zu3_A 113 SINGDAFS-------DEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKES 185 (405)
T ss_dssp EEESCTTS-------HHHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEE
T ss_pred EEECCCCC-------HHHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccc
Confidence 89999995 3333333 24699999999863 11
Q ss_pred ------cccHHHHHHHhHHHHH-HHHHHHHH--c-cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHH
Q 008324 127 ------DERYDVAFGINTLGVI-HLVNFAKK--C-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQK 196 (570)
Q Consensus 127 ------~~~~~~~~~~Nv~gt~-~ll~la~~--~-~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~ 196 (570)
.+.++..+++|..++. .+++.+.. + .+-.++|.+||........
T Consensus 186 ~i~~~t~ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p-------------------------- 239 (405)
T 3zu3_A 186 VLQPATQSEIDSTVAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHD-------------------------- 239 (405)
T ss_dssp EECCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTT--------------------------
T ss_pred cCCCCCHHHHHHHHHhhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCC--------------------------
Confidence 1346667788877775 45554432 2 1124688888864321100
Q ss_pred HHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-----cc-CCcEEEEecCceecCCCC
Q 008324 197 LNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-----KE-NLSLVIIRPTVVSGTYKE 265 (570)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~-~lp~~IvRPsiV~g~~~e 265 (570)
..+..+|+.||+..+.+.+.. .. ++++..+-|+.|-.+...
T Consensus 240 ----------------------------~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~s~ 286 (405)
T 3zu3_A 240 ----------------------------IYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQASS 286 (405)
T ss_dssp ----------------------------TTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCHHHH
T ss_pred ----------------------------CccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCchhh
Confidence 012368999999999887754 45 899999999998776443
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=98.97 E-value=5e-09 Score=109.90 Aligned_cols=189 Identities=11% Similarity=-0.067 Sum_probs=111.3
Q ss_pred CCCEEEEECCcchhHHHHHHHHHH-hCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILR-VQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~-~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.||++|||||++-||.++++.|++ .| .+|++..|.+........- ....+...+....+.. ..++..
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~G---A~Vv~~~r~~~~~~~~~~~-ag~~n~~a~~~~~~~~--------G~~a~~ 127 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGFG---ADTLGVFFEKPGTASKAGT-AGWYNSAAFDKHAKAA--------GLYSKS 127 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHHC---CEEEEEECCCCCCSSSCCC-HHHHHHHHHHHHHHHT--------TCCEEE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhCC---CEEEEEeCCchhhhhhhcc-cccchhHHHHHHHHhc--------CCcEEE
Confidence 489999999999999999999999 99 6788888876443210000 0000000010000111 246788
Q ss_pred EeccCCCCCCCCCchhhHHHHh-CCccEEEEcCccC----------------Cc-------------------------c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-NELDIMVNSAAIT----------------KF-------------------------D 127 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-~~vdiViH~AA~v----------------~f-------------------------~ 127 (570)
+.+|+++++---...+....-+ ..+|++||+||.. .+ .
T Consensus 128 i~~Dvtd~~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~ 207 (422)
T 3s8m_A 128 INGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASA 207 (422)
T ss_dssp EESCTTSHHHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCH
T ss_pred EEecCCCHHHHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCH
Confidence 9999995321000001111223 5689999999862 11 1
Q ss_pred ccHHHHHHHhHHHHH-HHHHHHHHc---cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhc
Q 008324 128 ERYDVAFGINTLGVI-HLVNFAKKC---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTK 203 (570)
Q Consensus 128 ~~~~~~~~~Nv~gt~-~ll~la~~~---~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 203 (570)
+.++..+++|..++. .+++.+... .+-.++|.+||........
T Consensus 208 e~~~~~v~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p--------------------------------- 254 (422)
T 3s8m_A 208 QEIEDTITVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITWP--------------------------------- 254 (422)
T ss_dssp HHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHH---------------------------------
T ss_pred HHHHHHHHhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCC---------------------------------
Confidence 234555666666554 555554331 1124788888864221000
Q ss_pred CCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCC
Q 008324 204 GAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKE 265 (570)
Q Consensus 204 ~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~e 265 (570)
..+..+|+.||+..+.+.+.. ..++++..+.|+.|-.+...
T Consensus 255 ---------------------~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~~ 300 (422)
T 3s8m_A 255 ---------------------IYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQASA 300 (422)
T ss_dssp ---------------------HHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGG
T ss_pred ---------------------CccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhhh
Confidence 012357999999998887754 45899999999999876543
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.91 E-value=1.3e-08 Score=112.99 Aligned_cols=207 Identities=14% Similarity=0.189 Sum_probs=133.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++-||+++++.|++.| .+|++..|... +.+.+++ ++. ..++..
T Consensus 320 l~gkvalVTGas~GIG~a~A~~la~~G---a~Vv~~~~~~~-----~~~~~~i---------~~~---------g~~~~~ 373 (604)
T 2et6_A 320 LKDKVVLITGAGAGLGKEYAKWFAKYG---AKVVVNDFKDA-----TKTVDEI---------KAA---------GGEAWP 373 (604)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEECSSCC-----HHHHHHH---------HHT---------TCEEEE
T ss_pred cCCCeEEEECcchHHHHHHHHHHHHCC---CEEEEEeCccH-----HHHHHHH---------Hhc---------CCeEEE
Confidence 679999999999999999999999999 67777665321 1111111 110 245667
Q ss_pred EeccC-CCCCCCCCchhhHHH---HhCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--cCce
Q 008324 90 VPGDI-SSEDLGLKDSNLKEE---LWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--VKLK 155 (570)
Q Consensus 90 v~gDl-~~~~lgls~~~~~~~---l~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~l~ 155 (570)
+.+|+ ++. ....+. .+..+|++||+||.... .+.++..+++|+.|+.++.+.+.. + .+-.
T Consensus 374 ~~~Dv~~~~------~~~~~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G 447 (604)
T 2et6_A 374 DQHDVAKDS------EAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFG 447 (604)
T ss_dssp ECCCHHHHH------HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE
T ss_pred EEcChHHHH------HHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 88888 421 222222 23579999999997532 245778899999999999887754 2 2346
Q ss_pred EEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHH
Q 008324 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (570)
Q Consensus 156 ~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
++|.+||....... .....|+.||
T Consensus 448 ~IVnisS~ag~~~~--------------------------------------------------------~~~~~Y~asK 471 (604)
T 2et6_A 448 RIINITSTSGIYGN--------------------------------------------------------FGQANYSSSK 471 (604)
T ss_dssp EEEEECCHHHHSCC--------------------------------------------------------TTBHHHHHHH
T ss_pred EEEEECChhhccCC--------------------------------------------------------CCChhHHHHH
Confidence 89999986432111 1124699999
Q ss_pred HHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHH
Q 008324 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (570)
Q Consensus 236 ~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ 310 (570)
+....+.+.. ..++.+..|.|+. ..+.. ... .. ....+....+++|+
T Consensus 472 aal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~-------~~~------~~--------------~~~~~~~~pe~vA~ 523 (604)
T 2et6_A 472 AGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMT-------LSI------MR--------------EQDKNLYHADQVAP 523 (604)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC------------------------------------CCSSCGGGTHH
T ss_pred HHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccc-------ccc------Cc--------------hhhccCCCHHHHHH
Confidence 9888877654 4589999999983 22111 000 00 00012346788999
Q ss_pred HHHHHHHHhhCCCCCCceEEecCC
Q 008324 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++.++..... -.++++.+.+|
T Consensus 524 ~v~~L~s~~~~--itG~~~~vdGG 545 (604)
T 2et6_A 524 LLVYLGTDDVP--VTGETFEIGGG 545 (604)
T ss_dssp HHHHTTSTTCC--CCSCEEEEETT
T ss_pred HHHHHhCCccC--CCCcEEEECCC
Confidence 98877653322 34778887765
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.89 E-value=1.8e-08 Score=111.75 Aligned_cols=165 Identities=15% Similarity=0.159 Sum_probs=107.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC------cccHHHHHHHHHhhhhhHHHHHhhhcccccccc
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD------IDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFI 83 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~------~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~ 83 (570)
++||+++||||++-||+++++.|++.| .+|++..|... .....+.+.+++ +..
T Consensus 6 l~gkvalVTGas~GIG~a~A~~la~~G---a~Vv~~~~~~~~~~~gr~~~~~~~~~~~i---------~~~--------- 64 (604)
T 2et6_A 6 FKDKVVIITGAGGGLGKYYSLEFAKLG---AKVVVNDLGGALNGQGGNSKAADVVVDEI---------VKN--------- 64 (604)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEECC-----------CHHHHHHHHH---------HHT---------
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcC---CEEEEEeCCccccccccchHHHHHHHHHH---------Hhc---------
Confidence 689999999999999999999999999 67777766531 112222222121 111
Q ss_pred CCceEEEeccCCCCCCCCCchhhHHH---HhCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c-
Q 008324 84 SEKITFVPGDISSEDLGLKDSNLKEE---LWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C- 151 (570)
Q Consensus 84 ~~kv~~v~gDl~~~~lgls~~~~~~~---l~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~- 151 (570)
..+.. .|+++..- .....+. .+..+|++||+||.... .+.++..+++|+.|+..+.+++.. |
T Consensus 65 g~~~~---~d~~d~~~---~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~ 138 (604)
T 2et6_A 65 GGVAV---ADYNNVLD---GDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQ 138 (604)
T ss_dssp TCEEE---EECCCTTC---HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCeEE---EEcCCHHH---HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 12222 46554321 1122222 24579999999997532 245778899999999999887754 2
Q ss_pred -cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+-.++|.+||....... .....
T Consensus 139 ~~~~G~IVnisS~ag~~~~--------------------------------------------------------~~~~~ 162 (604)
T 2et6_A 139 KQKYGRIVNTSSPAGLYGN--------------------------------------------------------FGQAN 162 (604)
T ss_dssp HHTCEEEEEECCHHHHHCC--------------------------------------------------------TTBHH
T ss_pred HcCCCEEEEECCHHHcCCC--------------------------------------------------------CCchH
Confidence 134689999986432111 11246
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecC
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPT 257 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPs 257 (570)
|+.||+..+.+.+.. ..++.+..|.|+
T Consensus 163 Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg 194 (604)
T 2et6_A 163 YASAKSALLGFAETLAKEGAKYNIKANAIAPL 194 (604)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHhCccCeEEEEEccC
Confidence 999999888887654 458999999996
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=1.4e-08 Score=107.01 Aligned_cols=173 Identities=10% Similarity=-0.072 Sum_probs=110.1
Q ss_pred cCCCEEEEECCcchhHHH--HHHHHHHhCCCccEEEEEEcCCCcccH---------HHHHHHHHhhhhhHHHHHhhhccc
Q 008324 10 LENKTILVSGVTGFVAKV--FIEKILRVQPNVKKLYLFVRAADIDSA---------ALRFQNEVLAKDVFNVLKEKWGTR 78 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~--LvekLl~~~~~V~~V~~lvR~~~~~~~---------~~rl~~~l~~~~~f~~l~~~~~~~ 78 (570)
..||+++||||++-||.+ +++.|.+.| .+|+++.|++..... .+.+. .+.+..
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~G---a~Vi~~~r~~~~~~~~~~~~~~~~~~~~~----------~~~~~~--- 121 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPE---AHTIGVSYETGATDRRIGTAGWYNNIFFK----------EFAKKK--- 121 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSC---CEEEEEECCCCCCSSCCCCHHHHHHHHHH----------HHHHHT---
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCC---CEEEEEecCcchhhhcccccccchHHHHH----------HHHHHc---
Confidence 579999999999999999 999998888 678888887644210 12222 111111
Q ss_pred cccccCCceEEEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccC----------------Cc---------
Q 008324 79 LNSFISEKITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAIT----------------KF--------- 126 (570)
Q Consensus 79 ~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v----------------~f--------- 126 (570)
..++..+.+|++++ +..+.++ ..+|++||+||.. .+
T Consensus 122 -----g~~~~~~~~Dvtd~-------~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~ 189 (418)
T 4eue_A 122 -----GLVAKNFIEDAFSN-------ETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTI 189 (418)
T ss_dssp -----TCCEEEEESCTTCH-------HHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEE
T ss_pred -----CCcEEEEEeeCCCH-------HHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccc
Confidence 25688999999953 3233322 3589999999863 01
Q ss_pred ----------------cccHHHHHHHhHHHHH-HHHHHHHHc---cCceEEEEEecceeecCCCcccccccCCCCCCCCh
Q 008324 127 ----------------DERYDVAFGINTLGVI-HLVNFAKKC---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDF 186 (570)
Q Consensus 127 ----------------~~~~~~~~~~Nv~gt~-~ll~la~~~---~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~ 186 (570)
.+.++..+++|..+.. .+++.+... .+-.++|.+||...... .+
T Consensus 190 d~~~~~~~~~~~~~~t~e~~~~~~~vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~---------~p------- 253 (418)
T 4eue_A 190 DVERDEITLKKVSSASIEEIEETRKVMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRT---------YK------- 253 (418)
T ss_dssp ETTTTEEEEEEECBCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGG---------TT-------
T ss_pred cccccccccccccCCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCC---------CC-------
Confidence 1234455556655554 444444432 11246888887632110 00
Q ss_pred HHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-----c-cCCcEEEEecCcee
Q 008324 187 DAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-----K-ENLSLVIIRPTVVS 260 (570)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~-~~lp~~IvRPsiV~ 260 (570)
..+..+|+.||+..+.+.+.. . .++.+.++-|+.|-
T Consensus 254 --------------------------------------~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~ 295 (418)
T 4eue_A 254 --------------------------------------IYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALV 295 (418)
T ss_dssp --------------------------------------TTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCC
T ss_pred --------------------------------------ccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCc
Confidence 012368999999988887654 4 58999999999987
Q ss_pred cCCC
Q 008324 261 GTYK 264 (570)
Q Consensus 261 g~~~ 264 (570)
.+..
T Consensus 296 T~~s 299 (418)
T 4eue_A 296 TKAS 299 (418)
T ss_dssp CHHH
T ss_pred Chhh
Confidence 7543
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=4.1e-08 Score=124.23 Aligned_cols=170 Identities=15% Similarity=0.149 Sum_probs=116.5
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
|-.+|+++||||+|-||..+++.|++.|. +.|+++.|+.......+...++ ++.. ..++.
T Consensus 1881 ~~~~k~~lITGgs~GIG~aia~~la~~Ga--~~vvl~~R~~~~~~~~~~~~~~---------l~~~---------g~~v~ 1940 (2512)
T 2vz8_A 1881 CPPHKSYVITGGLGGFGLQLAQWLRLRGA--QKLVLTSRSGIRTGYQARQVRE---------WRRQ---------GVQVL 1940 (2512)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTC--CEEEEECSSCCCSHHHHHHHHH---------HHHT---------TCEEE
T ss_pred cCCCCEEEEECCCCCHHHHHHHHHHHCCC--CEEEEEeCCCcchHHHHHHHHH---------HHhC---------CCEEE
Confidence 45789999999999999999999999984 3478888876543222221111 1111 25688
Q ss_pred EEeccCCCCCCCCCchhhHHHHh------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-ccCc
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-CVKL 154 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~~~l 154 (570)
++.+|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++.+++.. ++..
T Consensus 1941 ~~~~Dvsd-------~~~v~~~~~~~~~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~ 2013 (2512)
T 2vz8_A 1941 VSTSNASS-------LDGARSLITEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPEL 2013 (2512)
T ss_dssp EECCCSSS-------HHHHHHHHHHHHHHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTC
T ss_pred EEecCCCC-------HHHHHHHHHHHHhcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 89999995 33333332 469999999997532 245667789999999999888765 4456
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.+||.+||....... .....|+.+
T Consensus 2014 g~iV~iSS~ag~~g~--------------------------------------------------------~g~~~Y~aa 2037 (2512)
T 2vz8_A 2014 DYFVIFSSVSCGRGN--------------------------------------------------------AGQANYGFA 2037 (2512)
T ss_dssp CEEEEECCHHHHTTC--------------------------------------------------------TTCHHHHHH
T ss_pred CEEEEecchhhcCCC--------------------------------------------------------CCcHHHHHH
Confidence 799999997543211 113469999
Q ss_pred HHHHHHHHHHh-ccCCcEEEEecCceec
Q 008324 235 KTMGEMLMQQS-KENLSLVIIRPTVVSG 261 (570)
Q Consensus 235 K~~aE~lv~~~-~~~lp~~IvRPsiV~g 261 (570)
|+..+.+.+.. ..++|...+-.+.+.+
T Consensus 2038 Kaal~~l~~~rr~~Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A 2038 NSAMERICEKRRHDGLPGLAVQWGAIGD 2065 (2512)
T ss_dssp HHHHHHHHHHHHHTTSCCCEEEECCBCT
T ss_pred HHHHHHHHHHHHHCCCcEEEEEccCcCC
Confidence 99999999855 5689988888776644
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.47 E-value=4.5e-07 Score=77.52 Aligned_cols=95 Identities=12% Similarity=0.030 Sum_probs=68.1
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+++|+|+|+ |++|+.+++.|++.| ..+|+++.|+.... +.+. ..++..+
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g--~~~v~~~~r~~~~~---~~~~------------------------~~~~~~~ 53 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSS--NYSVTVADHDLAAL---AVLN------------------------RMGVATK 53 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCS--SEEEEEEESCHHHH---HHHH------------------------TTTCEEE
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCC--CceEEEEeCCHHHH---HHHH------------------------hCCCcEE
Confidence 3679999999 999999999999986 25788888854211 1111 1456788
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEE
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V 158 (570)
.+|++ +.+....+++++|+|||+++.. .+..+++.|.+. +++.+.
T Consensus 54 ~~d~~-------~~~~~~~~~~~~d~vi~~~~~~---------------~~~~~~~~~~~~-g~~~~~ 98 (118)
T 3ic5_A 54 QVDAK-------DEAGLAKALGGFDAVISAAPFF---------------LTPIIAKAAKAA-GAHYFD 98 (118)
T ss_dssp ECCTT-------CHHHHHHHTTTCSEEEECSCGG---------------GHHHHHHHHHHT-TCEEEC
T ss_pred EecCC-------CHHHHHHHHcCCCEEEECCCch---------------hhHHHHHHHHHh-CCCEEE
Confidence 89998 4444557788999999998631 135678888875 666554
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=1.4e-06 Score=88.65 Aligned_cols=122 Identities=11% Similarity=0.059 Sum_probs=76.7
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|+||||+||+|.+++..|+..+. +..+.++.++.... ..+....++... .+ +....+.+..+
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~-~~el~L~Di~~~~~-~~~~~~~dl~~~---------~~-----~~~~~~~i~~~ 64 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPF-MKDLVLIGREHSIN-KLEGLREDIYDA---------LA-----GTRSDANIYVE 64 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTT-CCEEEEEECGGGHH-HHHHHHHHHHHH---------HT-----TSCCCCEEEEE
T ss_pred CEEEEECCCChhHHHHHHHHHhCCC-CCEEEEEcCCCchh-hhHHHHHHHHHh---------HH-----hcCCCeEEEeC
Confidence 4899999999999999999988653 34566666622211 011101011100 00 00122233222
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecc
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa 163 (570)
+ ++. .+.++++|+|||+||..+- .......+..|+.+++++++.+++. + +++|+++|-
T Consensus 65 ~----------d~l-~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~-~~~vlv~SN 123 (313)
T 1hye_A 65 S----------DEN-LRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI-C-DTKIFVITN 123 (313)
T ss_dssp E----------TTC-GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-C-CCEEEECSS
T ss_pred C----------cch-HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEecC
Confidence 2 111 2456899999999997643 3344567899999999999999997 5 888888874
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.43 E-value=6.4e-07 Score=91.67 Aligned_cols=118 Identities=16% Similarity=0.134 Sum_probs=78.2
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.++|+||||+||+|..++..|+..+. +..|.++.+.+. ..... ++... ....++..+.
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~-~~ev~l~Di~~~----~~~~~-dL~~~----------------~~~~~v~~~~ 65 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPL-VSVLHLYDVVNA----PGVTA-DISHM----------------DTGAVVRGFL 65 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTT-EEEEEEEESSSH----HHHHH-HHHTS----------------CSSCEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEeCCCc----HhHHH-Hhhcc----------------cccceEEEEe
Confidence 46899999999999999999988653 467777766543 11111 11000 0001222221
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecc
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa 163 (570)
+ ..+. ++.++++|+|||+|+...- ..........|+.+++++++.+.+. +.+++|+++|-
T Consensus 66 ~----------t~d~-~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~-~p~~~viv~SN 126 (326)
T 1smk_A 66 G----------QQQL-EAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKC-CPRAIVNLISN 126 (326)
T ss_dssp S----------HHHH-HHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCS
T ss_pred C----------CCCH-HHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEECC
Confidence 1 1233 4667899999999997642 2333456899999999999999997 67788888763
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=98.35 E-value=4.3e-06 Score=84.58 Aligned_cols=119 Identities=12% Similarity=0.017 Sum_probs=76.6
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|+||||+||+|..++..|+..+. +.++.++.++.... ..+....++. +... ...++.+..+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~-~~el~L~Di~~~~~-~~~~~~~dl~-----~~~~----------~~~~~~v~~~ 63 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDI-ADEVVFVDIPDKED-DTVGQAADTN-----HGIA----------YDSNTRVRQG 63 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-CSEEEEECCGGGHH-HHHHHHHHHH-----HHHT----------TTCCCEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEcCCCChh-hHHHHHHHHH-----HHHh----------hCCCcEEEeC
Confidence 5899999999999999999988653 34676666621111 0111111111 1000 0123333322
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecc
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa 163 (570)
| .+.++++|+|||+|+..+- .......+..|+.+++++++.+++. +.+++|+++|-
T Consensus 64 ~--------------~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~p~~~viv~SN 120 (303)
T 1o6z_A 64 G--------------YEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTSN 120 (303)
T ss_dssp C--------------GGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEEECCS
T ss_pred C--------------HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEeCC
Confidence 1 1335789999999997643 2344566899999999999999997 77888888763
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.34 E-value=6.6e-07 Score=91.72 Aligned_cols=121 Identities=11% Similarity=0.049 Sum_probs=76.3
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCC----CccEEEEEEcCCCcccHHHHHHH---HHhhhhhHHHHHhhhccccccccC
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQP----NVKKLYLFVRAADIDSAALRFQN---EVLAKDVFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~----~V~~V~~lvR~~~~~~~~~rl~~---~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
.++|+||||+||+|.+++..|+..+. .+..|.++.+.+.. ..++++. ++... . .
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~--~~~~~~g~~~dl~~~-~----------------~ 65 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEK--AQKALQGVMMEIDDC-A----------------F 65 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHH--HHHHHHHHHHHHHTT-T----------------C
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCcc--ccccchhhHHHHhhh-c----------------c
Confidence 46899999999999999999988652 12367776554100 0111110 11100 0 0
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCce-EEEEEec
Q 008324 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLK-VFVHVST 162 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~-~~V~vST 162 (570)
. + .+|+.. ..+ ....++++|+|||+||..+- .......+..|+.+++++++.+.+..+.+ .||++|.
T Consensus 66 ~-~---~~~i~~------~~~-~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 66 P-L---LAGMTA------HAD-PMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp T-T---EEEEEE------ESS-HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred c-c---cCcEEE------ecC-cHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 0 1 124331 122 24667899999999997653 33456678999999999999999873244 7888874
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=6.7e-06 Score=104.41 Aligned_cols=115 Identities=15% Similarity=0.169 Sum_probs=78.2
Q ss_pred cCCCEEEEECCcch-hHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 10 LENKTILVSGVTGF-VAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGF-lG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
++||+++||||++- ||+++++.|++.| .+|++..|+..... .+.+ +.+.++... ...++.
T Consensus 2134 l~gKvaLVTGAs~GsIG~AiA~~La~~G---A~Vvi~~r~~~~~~-~~~~----------~~l~~~l~~-----~G~~~~ 2194 (3089)
T 3zen_D 2134 XXDEVAVVTGASKGSIAASVVGQLLDGG---ATVIATTSRLDDDR-LAFY----------KQLYRDHAR-----FDATLW 2194 (3089)
T ss_dssp CCCCEEEEESCCTTSHHHHHHHHHHHTT---CEEEEEESCCSHHH-HHHH----------HHHHHHHCC-----TTCEEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHHHHCC---CEEEEEeCChhhhh-hHHH----------HHHHHHHhh-----cCCeEE
Confidence 78999999999999 9999999999999 67888888764311 0111 111122211 124678
Q ss_pred EEeccCCCCCCCCCchhhHHHH----hC-------CccEEEEcCcc----CC------------ccccHHHHHHHhHHHH
Q 008324 89 FVPGDISSEDLGLKDSNLKEEL----WN-------ELDIMVNSAAI----TK------------FDERYDVAFGINTLGV 141 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l----~~-------~vdiViH~AA~----v~------------f~~~~~~~~~~Nv~gt 141 (570)
.+.+|+++ .+..+.+ .+ .+|++||+||. .. ++..++..+++|+.++
T Consensus 2195 ~v~~Dvtd-------~~~v~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~ 2267 (3089)
T 3zen_D 2195 VVPANMAS-------YSDIDKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAV 2267 (3089)
T ss_dssp EEECCTTC-------HHHHHHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHH
T ss_pred EEEecCCC-------HHHHHHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 89999995 3333333 22 48999999997 11 1122345589999999
Q ss_pred HHHHHHHHH
Q 008324 142 IHLVNFAKK 150 (570)
Q Consensus 142 ~~ll~la~~ 150 (570)
..+++.+..
T Consensus 2268 ~~l~~~~~~ 2276 (3089)
T 3zen_D 2268 QRLISGLSK 2276 (3089)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 998887764
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=4e-06 Score=84.12 Aligned_cols=83 Identities=17% Similarity=0.160 Sum_probs=59.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|++|++++..|++.| .+|++..|+... .+.+.++ +... .++.+
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G---~~V~i~~R~~~~---~~~l~~~---------~~~~----------~~~~~ 171 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEG---AEVVLCGRKLDK---AQAAADS---------VNKR----------FKVNV 171 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESSHHH---HHHHHHH---------HHHH----------HTCCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCc---CEEEEEECCHHH---HHHHHHH---------HHhc----------CCcEE
Confidence 578999999999999999999999988 468888886421 1122111 1111 13446
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccC
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAIT 124 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v 124 (570)
+.+|++ +.+..+.+++++|+|||+|+..
T Consensus 172 ~~~D~~-------~~~~~~~~~~~~DvlVn~ag~g 199 (287)
T 1lu9_A 172 TAAETA-------DDASRAEAVKGAHFVFTAGAIG 199 (287)
T ss_dssp EEEECC-------SHHHHHHHTTTCSEEEECCCTT
T ss_pred EEecCC-------CHHHHHHHHHhCCEEEECCCcc
Confidence 778988 4444557788899999999853
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=97.92 E-value=1.1e-05 Score=86.26 Aligned_cols=108 Identities=16% Similarity=0.219 Sum_probs=70.9
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++++|+||| +|++|+++++.|++.+ .+|++..|+.. +.+ ++ .++ ..++..+
T Consensus 2 ~~k~VlViG-aG~iG~~ia~~L~~~G---~~V~v~~R~~~------~a~-~l---------a~~---------~~~~~~~ 52 (450)
T 1ff9_A 2 ATKSVLMLG-SGFVTRPTLDVLTDSG---IKVTVACRTLE------SAK-KL---------SAG---------VQHSTPI 52 (450)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHHTTT---CEEEEEESSHH------HHH-HT---------TTT---------CTTEEEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCc---CEEEEEECCHH------HHH-HH---------HHh---------cCCceEE
Confidence 478999998 8999999999999877 56888888642 111 11 000 1346788
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHH--Hh-------HHHHHHHHHHHHHccCce
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFG--IN-------TLGVIHLVNFAKKCVKLK 155 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~--~N-------v~gt~~ll~la~~~~~l~ 155 (570)
.+|++ +.+....+++++|+|||+|+.....+-...+++ .| ..++.+++++|++. ++.
T Consensus 53 ~~Dv~-------d~~~l~~~l~~~DvVIn~a~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~a-Gv~ 118 (450)
T 1ff9_A 53 SLDVN-------DDAALDAEVAKHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDA-GIT 118 (450)
T ss_dssp ECCTT-------CHHHHHHHHTTSSEEEECCC--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHT-TCE
T ss_pred EeecC-------CHHHHHHHHcCCcEEEECCccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHC-CCe
Confidence 89998 444445777899999999986322111122232 22 24678899999986 654
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=97.77 E-value=4.4e-05 Score=73.56 Aligned_cols=78 Identities=17% Similarity=0.284 Sum_probs=54.1
Q ss_pred CCCEEEEECC----------------cchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhh
Q 008324 11 ENKTILVSGV----------------TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEK 74 (570)
Q Consensus 11 ~~k~VlITGa----------------TGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~ 74 (570)
+||+|+|||| ||.+|.++++.+++.| .+|.++.|+..-...
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~G---a~V~lv~~~~~~~~~-------------------- 58 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAG---YEVCLITTKRALKPE-------------------- 58 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTT---CEEEEEECTTSCCCC--------------------
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCC---CEEEEEeCCcccccc--------------------
Confidence 5899999999 9999999999999999 677888886531100
Q ss_pred hccccccccCCceEEEeccCCCCCCCCCchhhHH---HHhCCccEEEEcCccCCcc
Q 008324 75 WGTRLNSFISEKITFVPGDISSEDLGLKDSNLKE---ELWNELDIMVNSAAITKFD 127 (570)
Q Consensus 75 ~~~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~---~l~~~vdiViH~AA~v~f~ 127 (570)
....+..+..+- ..+..+ ..+.++|++||+||...|.
T Consensus 59 --------~~~~~~~~~v~s--------~~em~~~v~~~~~~~Dili~aAAvsD~~ 98 (232)
T 2gk4_A 59 --------PHPNLSIREITN--------TKDLLIEMQERVQDYQVLIHSMAVSDYT 98 (232)
T ss_dssp --------CCTTEEEEECCS--------HHHHHHHHHHHGGGCSEEEECSBCCSEE
T ss_pred --------CCCCeEEEEHhH--------HHHHHHHHHHhcCCCCEEEEcCcccccc
Confidence 012445544431 233332 3446799999999987764
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=7e-05 Score=65.92 Aligned_cols=101 Identities=12% Similarity=0.142 Sum_probs=62.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++|+|+|+ |.+|+.+++.|.+.|. +|+++.|+.. +.+ . ++ ......
T Consensus 4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~---~v~~~d~~~~------~~~-~---------~~-----------~~~~~~ 52 (144)
T 2hmt_A 4 IKNKQFAVIGL-GRFGGSIVKELHRMGH---EVLAVDINEE------KVN-A---------YA-----------SYATHA 52 (144)
T ss_dssp --CCSEEEECC-SHHHHHHHHHHHHTTC---CCEEEESCHH------HHH-T---------TT-----------TTCSEE
T ss_pred CcCCcEEEECC-CHHHHHHHHHHHHCCC---EEEEEeCCHH------HHH-H---------HH-----------HhCCEE
Confidence 45788999998 9999999999999884 4566666431 111 0 00 123456
Q ss_pred EeccCCCCCCCCCchhhHHHH-hCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEec
Q 008324 90 VPGDISSEDLGLKDSNLKEEL-WNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vST 162 (570)
+.+|.+ +.+....+ .+++|+||++++.. .+.|. .+.+.+++. +.+++|..++
T Consensus 53 ~~~d~~-------~~~~l~~~~~~~~d~vi~~~~~~---------~~~~~----~~~~~~~~~-~~~~ii~~~~ 105 (144)
T 2hmt_A 53 VIANAT-------EENELLSLGIRNFEYVIVAIGAN---------IQAST----LTTLLLKEL-DIPNIWVKAQ 105 (144)
T ss_dssp EECCTT-------CHHHHHTTTGGGCSEEEECCCSC---------HHHHH----HHHHHHHHT-TCSEEEEECC
T ss_pred EEeCCC-------CHHHHHhcCCCCCCEEEECCCCc---------hHHHH----HHHHHHHHc-CCCeEEEEeC
Confidence 788987 33333343 56799999998751 12222 355667776 5566655444
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00034 Score=61.16 Aligned_cols=96 Identities=15% Similarity=0.200 Sum_probs=60.5
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+++|+|+|+ |++|+.+++.|.+.+ .+|.++.|++.. .+++. +. ..+..+.
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g---~~v~~~d~~~~~---~~~~~-------------~~----------~~~~~~~ 53 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKG---HDIVLIDIDKDI---CKKAS-------------AE----------IDALVIN 53 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HH----------CSSEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCC---CeEEEEECCHHH---HHHHH-------------Hh----------cCcEEEE
Confidence 579999986 999999999999987 567777775321 11111 11 2455778
Q ss_pred ccCCCCCCCCCchhhHHH-HhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 92 GDISSEDLGLKDSNLKEE-LWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~-l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
+|.++ .+.... .++++|+||++... . ..| ..+.+++++. +..++|.
T Consensus 54 ~d~~~-------~~~l~~~~~~~~d~vi~~~~~------~----~~~----~~~~~~~~~~-~~~~ii~ 100 (140)
T 1lss_A 54 GDCTK-------IKTLEDAGIEDADMYIAVTGK------E----EVN----LMSSLLAKSY-GINKTIA 100 (140)
T ss_dssp SCTTS-------HHHHHHTTTTTCSEEEECCSC------H----HHH----HHHHHHHHHT-TCCCEEE
T ss_pred cCCCC-------HHHHHHcCcccCCEEEEeeCC------c----hHH----HHHHHHHHHc-CCCEEEE
Confidence 88873 333322 25689999999653 1 122 2455667776 4456654
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00063 Score=70.14 Aligned_cols=96 Identities=14% Similarity=0.012 Sum_probs=59.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHH-HhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKIL-RVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl-~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
..+|++|||||+.-+|.+....|. +.| ..+.++.|.+........- ....+...|...-++. ..+..
T Consensus 48 ~~pK~vLVtGaSsGiGlA~AialAf~~G---A~vi~v~~~~~~~~~~~at-ag~~~~~a~~~~i~~~--------G~~a~ 115 (401)
T 4ggo_A 48 KAPKNVLVLGCSNGYGLASRITAAFGYG---AATIGVSFEKAGSETKYGT-PGWYNNLAFDEAAKRE--------GLYSV 115 (401)
T ss_dssp CCCCEEEEESCSSHHHHHHHHHHHHHHC---CEEEEEECCCCCCSSSCCC-HHHHHHHHHHHHHHHH--------TCCEE
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhhCC---CCEEEEecCCccccccccc-ccchhHHHHHHHHHHc--------CCCce
Confidence 457999999999999999999997 677 5677777765332100000 0001111122222222 35778
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccC
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAIT 124 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v 124 (570)
.+.+|+++ ++..+.++ .++|+++|++|..
T Consensus 116 ~i~~Dv~d-------~e~i~~vi~~i~~~~G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 116 TIDGDAFS-------DEIKAQVIEEAKKKGIKFDLIVYSLASP 151 (401)
T ss_dssp EEESCTTS-------HHHHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred eEeCCCCC-------HHHHHHHHHHHHHhcCCCCEEEEecccc
Confidence 89999995 33333433 3599999999964
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00038 Score=70.58 Aligned_cols=115 Identities=15% Similarity=0.102 Sum_probs=72.8
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|+||+|++|..++..|+..+. +..|.++.+.+ . +....++... ....++....+
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~-~~ev~L~Di~~--~---~~~a~dL~~~----------------~~~~~l~~~~~ 58 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPL-VSRLTLYDIAH--T---PGVAADLSHI----------------ETRATVKGYLG 58 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTT-CSEEEEEESSS--H---HHHHHHHTTS----------------SSSCEEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CcEEEEEeCCc--c---HHHHHHHhcc----------------CcCceEEEecC
Confidence 4899999999999999999887652 56788888876 1 1111122110 00012222211
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCce-EEEEEe
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLK-VFVHVS 161 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~-~~V~vS 161 (570)
..+ .++.++++|+||++|+...- .......+..|+..++.+++.+.+. ... .+|.+|
T Consensus 59 ----------t~d-~~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~s 117 (314)
T 1mld_A 59 ----------PEQ-LPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQH-CPDAMICIIS 117 (314)
T ss_dssp ----------GGG-HHHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEECS
T ss_pred ----------CCC-HHHHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEEC
Confidence 123 23567899999999987642 2333445799999999999988886 333 455443
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00023 Score=68.36 Aligned_cols=37 Identities=14% Similarity=0.177 Sum_probs=32.5
Q ss_pred cCCCEEEEECC----------------cchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGV----------------TGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGa----------------TGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
++||+|+|||| ||.+|.++++.|++.| .+|.++.|+.
T Consensus 6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~G---a~V~l~~~~~ 58 (226)
T 1u7z_A 6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRG---ANVTLVSGPV 58 (226)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTT---CEEEEEECSC
T ss_pred CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCC---CEEEEEECCc
Confidence 68999999999 7999999999999999 6677777754
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00023 Score=76.12 Aligned_cols=112 Identities=14% Similarity=0.164 Sum_probs=66.8
Q ss_pred HHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 008324 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
|..-+++++|+|+|| |++|+.++..|++.+ . .+|++..|+.... +.+. +. .
T Consensus 17 ~~~~l~~k~VlIiGA-GgiG~aia~~L~~~~-g-~~V~v~~R~~~ka---~~la-------------~~----------~ 67 (467)
T 2axq_A 17 IEGRHMGKNVLLLGS-GFVAQPVIDTLAAND-D-INVTVACRTLANA---QALA-------------KP----------S 67 (467)
T ss_dssp ------CEEEEEECC-STTHHHHHHHHHTST-T-EEEEEEESSHHHH---HHHH-------------GG----------G
T ss_pred cccCCCCCEEEEECC-hHHHHHHHHHHHhCC-C-CeEEEEECCHHHH---HHHH-------------Hh----------c
Confidence 555677899999997 999999999999873 2 4788888864221 1111 00 1
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHH-------Hh--HHHHHHHHHHHHHccCc
Q 008324 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFG-------IN--TLGVIHLVNFAKKCVKL 154 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~-------~N--v~gt~~ll~la~~~~~l 154 (570)
++..+.+|+. +.+....+++++|+|||+++......-.+.+++ ++ ...+..+++.|++. ++
T Consensus 68 ~~~~~~~D~~-------d~~~l~~~l~~~DvVIn~tp~~~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~a-Gv 137 (467)
T 2axq_A 68 GSKAISLDVT-------DDSALDKVLADNDVVISLIPYTFHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKA-GI 137 (467)
T ss_dssp TCEEEECCTT-------CHHHHHHHHHTSSEEEECSCGGGHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHH-TC
T ss_pred CCcEEEEecC-------CHHHHHHHHcCCCEEEECCchhhhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHc-CC
Confidence 3556778888 443345677899999999886421111111121 11 13456777777775 44
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00037 Score=71.15 Aligned_cols=119 Identities=16% Similarity=0.075 Sum_probs=71.1
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccE-----EEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKK-----LYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~-----V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
.++|.||||+|++|.+++..|+..+. +.+ +.++.+++..... +-...++... . .+-
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~-~~e~~~~~l~L~Di~~~~~~~-~g~a~DL~~~----------~-------~~~ 63 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSV-FGKDQPIILVLLDITPMMGVL-DGVLMELQDC----------A-------LPL 63 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTT-TCTTCCEEEEEECCGGGHHHH-HHHHHHHHHT----------C-------CTT
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCC-ccccCCCEEEEEeCCCccccc-hhhHhhhHhh----------h-------hcc
Confidence 36899999999999999999987542 223 6777665321111 1111022110 0 011
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCce--EEEEEe
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLK--VFVHVS 161 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~--~~V~vS 161 (570)
+..+.+ . . + ....++++|+|||+||..+- .++....++.|+..++++++.+.+. +.+ .++.+|
T Consensus 64 ~~~~~~--~-------~-~-~~~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~-~~~~~~vivvs 129 (333)
T 5mdh_A 64 LKDVIA--T-------D-K-EEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY-AKKSVKVIVVG 129 (333)
T ss_dssp EEEEEE--E-------S-C-HHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH-SCTTCEEEECS
T ss_pred cCCEEE--c-------C-C-cHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEcC
Confidence 111111 1 1 1 12556899999999987542 2334456899999999999999987 443 355555
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00066 Score=59.82 Aligned_cols=75 Identities=12% Similarity=0.137 Sum_probs=51.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
..+++|+|+|+ |.+|+.+++.|.+.| ..|.++.|++.. .+++. ...+.+
T Consensus 4 ~~~~~v~I~G~-G~iG~~la~~L~~~g---~~V~~id~~~~~---~~~~~------------------------~~~~~~ 52 (141)
T 3llv_A 4 NGRYEYIVIGS-EAAGVGLVRELTAAG---KKVLAVDKSKEK---IELLE------------------------DEGFDA 52 (141)
T ss_dssp --CCSEEEECC-SHHHHHHHHHHHHTT---CCEEEEESCHHH---HHHHH------------------------HTTCEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCC---CeEEEEECCHHH---HHHHH------------------------HCCCcE
Confidence 34678999997 999999999999988 566777775321 11111 134678
Q ss_pred EeccCCCCCCCCCchhhHHHH-hCCccEEEEcCc
Q 008324 90 VPGDISSEDLGLKDSNLKEEL-WNELDIMVNSAA 122 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-~~~vdiViH~AA 122 (570)
+.||.+ +++.++.+ .+++|+||.+.+
T Consensus 53 ~~gd~~-------~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 53 VIADPT-------DESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp EECCTT-------CHHHHHHSCCTTCSEEEECCS
T ss_pred EECCCC-------CHHHHHhCCcccCCEEEEecC
Confidence 899999 44444333 457999998765
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00032 Score=73.77 Aligned_cols=82 Identities=23% Similarity=0.184 Sum_probs=56.5
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCc-cEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNV-KKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V-~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
++|+|+|| |++|+.+++.|++.+ ++ ..|.+..|+.... +++.++ +.... ..++..+.
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~~~g-~~~~~V~v~~r~~~~~---~~la~~---------l~~~~--------~~~~~~~~ 59 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMAMNR-EVFSHITLASRTLSKC---QEIAQS---------IKAKG--------YGEIDITT 59 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTCT-TTCCEEEEEESCHHHH---HHHHHH---------HHHTT--------CCCCEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-CCceEEEEEECCHHHH---HHHHHH---------hhhhc--------CCceEEEE
Confidence 58999999 999999999999865 33 4788888865321 222211 11100 13678899
Q ss_pred ccCCCCCCCCCchhhHHHHhCC--ccEEEEcCcc
Q 008324 92 GDISSEDLGLKDSNLKEELWNE--LDIMVNSAAI 123 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~--vdiViH~AA~ 123 (570)
+|++ +.+..+.++++ +|+|||+|+.
T Consensus 60 ~D~~-------d~~~l~~~l~~~~~DvVin~ag~ 86 (405)
T 4ina_A 60 VDAD-------SIEELVALINEVKPQIVLNIALP 86 (405)
T ss_dssp CCTT-------CHHHHHHHHHHHCCSEEEECSCG
T ss_pred ecCC-------CHHHHHHHHHhhCCCEEEECCCc
Confidence 9998 44445577766 8999999985
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0015 Score=66.84 Aligned_cols=112 Identities=15% Similarity=0.159 Sum_probs=69.8
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
.+|+++++|.|+||+|++|..++..++..+. ..+|.++.+.+... +....++.... | ...+
T Consensus 3 ~~~~~~~KV~ViGaaG~VG~~~a~~l~~~g~-~~evvLiDi~~~k~---~g~a~DL~~~~-~--------------~~~~ 63 (343)
T 3fi9_A 3 LSYLTEEKLTIVGAAGMIGSNMAQTAAMMRL-TPNLCLYDPFAVGL---EGVAEEIRHCG-F--------------EGLN 63 (343)
T ss_dssp CCCSCSSEEEEETTTSHHHHHHHHHHHHTTC-CSCEEEECSCHHHH---HHHHHHHHHHC-C--------------TTCC
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHhcCC-CCEEEEEeCCchhH---HHHHHhhhhCc-C--------------CCCc
Confidence 3689999999999999999999999988773 24567776643211 11111221110 0 0112
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
+.+ . .+. .+.++++|+||++||..+- .+.-...+..|+...+.+.+.+.+.
T Consensus 64 i~~-t------------~d~-~~al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~ 115 (343)
T 3fi9_A 64 LTF-T------------SDI-KEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSY 115 (343)
T ss_dssp CEE-E------------SCH-HHHHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEE-c------------CCH-HHHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 221 1 122 2556899999999997542 2344566899999999999998886
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0034 Score=56.29 Aligned_cols=82 Identities=12% Similarity=0.071 Sum_probs=53.3
Q ss_pred cHHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccC
Q 008324 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 5 ~i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
.+++...+++|+|.|+ |.+|..++..|.+.| .+|.++.|++..... ++. .
T Consensus 12 ~~~~~~~~~~v~IiG~-G~iG~~la~~L~~~g---~~V~vid~~~~~~~~----------------~~~----------~ 61 (155)
T 2g1u_A 12 HMSKKQKSKYIVIFGC-GRLGSLIANLASSSG---HSVVVVDKNEYAFHR----------------LNS----------E 61 (155)
T ss_dssp -----CCCCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCGGGGGG----------------SCT----------T
T ss_pred hhhcccCCCcEEEECC-CHHHHHHHHHHHhCC---CeEEEEECCHHHHHH----------------HHh----------c
Confidence 3567778999999995 999999999999988 578888886532210 000 1
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHH-hCCccEEEEcCcc
Q 008324 85 EKITFVPGDISSEDLGLKDSNLKEEL-WNELDIMVNSAAI 123 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgls~~~~~~~l-~~~vdiViH~AA~ 123 (570)
..+..+.+|.+ +.+.+... ++++|+||.+.+.
T Consensus 62 ~g~~~~~~d~~-------~~~~l~~~~~~~ad~Vi~~~~~ 94 (155)
T 2g1u_A 62 FSGFTVVGDAA-------EFETLKECGMEKADMVFAFTND 94 (155)
T ss_dssp CCSEEEESCTT-------SHHHHHTTTGGGCSEEEECSSC
T ss_pred CCCcEEEecCC-------CHHHHHHcCcccCCEEEEEeCC
Confidence 24557778877 33333333 5679999998764
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00084 Score=69.43 Aligned_cols=84 Identities=14% Similarity=0.124 Sum_probs=59.5
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+|.|| |++|+.+++.|.+. ..|.+..|+.+.. +++ .+.+..+..
T Consensus 17 mkilvlGa-G~vG~~~~~~L~~~----~~v~~~~~~~~~~---~~~-------------------------~~~~~~~~~ 63 (365)
T 3abi_A 17 MKVLILGA-GNIGRAIAWDLKDE----FDVYIGDVNNENL---EKV-------------------------KEFATPLKV 63 (365)
T ss_dssp CEEEEECC-SHHHHHHHHHHTTT----SEEEEEESCHHHH---HHH-------------------------TTTSEEEEC
T ss_pred cEEEEECC-CHHHHHHHHHHhcC----CCeEEEEcCHHHH---HHH-------------------------hccCCcEEE
Confidence 57999998 99999999988763 4566666653211 111 245667888
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
|+. +.+.+..+++++|+||++++.. +. ..++++|.+.
T Consensus 64 d~~-------d~~~l~~~~~~~DvVi~~~p~~-----~~----------~~v~~~~~~~ 100 (365)
T 3abi_A 64 DAS-------NFDKLVEVMKEFELVIGALPGF-----LG----------FKSIKAAIKS 100 (365)
T ss_dssp CTT-------CHHHHHHHHTTCSEEEECCCGG-----GH----------HHHHHHHHHH
T ss_pred ecC-------CHHHHHHHHhCCCEEEEecCCc-----cc----------chHHHHHHhc
Confidence 988 5666678889999999998652 11 2577888886
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0018 Score=58.01 Aligned_cols=78 Identities=12% Similarity=0.238 Sum_probs=53.6
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
..++|+|+|+ |.+|+.+++.|.+.| ..|.++.|.... ..+++. ... ..++.++
T Consensus 2 ~~~~vlI~G~-G~vG~~la~~L~~~g---~~V~vid~~~~~--~~~~~~-------------~~~--------~~~~~~i 54 (153)
T 1id1_A 2 RKDHFIVCGH-SILAINTILQLNQRG---QNVTVISNLPED--DIKQLE-------------QRL--------GDNADVI 54 (153)
T ss_dssp CCSCEEEECC-SHHHHHHHHHHHHTT---CCEEEEECCCHH--HHHHHH-------------HHH--------CTTCEEE
T ss_pred CCCcEEEECC-CHHHHHHHHHHHHCC---CCEEEEECCChH--HHHHHH-------------Hhh--------cCCCeEE
Confidence 4578999996 999999999999988 556777775311 111111 111 2467889
Q ss_pred eccCCCCCCCCCchhhHHHH-hCCccEEEEcCc
Q 008324 91 PGDISSEDLGLKDSNLKEEL-WNELDIMVNSAA 122 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l-~~~vdiViH~AA 122 (570)
.||.+ +.+.++.. ++++|+||-+..
T Consensus 55 ~gd~~-------~~~~l~~a~i~~ad~vi~~~~ 80 (153)
T 1id1_A 55 PGDSN-------DSSVLKKAGIDRCRAILALSD 80 (153)
T ss_dssp ESCTT-------SHHHHHHHTTTTCSEEEECSS
T ss_pred EcCCC-------CHHHHHHcChhhCCEEEEecC
Confidence 99998 45555444 788999997754
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0093 Score=54.81 Aligned_cols=74 Identities=15% Similarity=0.212 Sum_probs=51.5
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHh-CCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~-~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.+++|+|.| .|.+|..+++.|.+. | ..|.++.|++.. .+.+. ...+..
T Consensus 38 ~~~~v~IiG-~G~~G~~~a~~L~~~~g---~~V~vid~~~~~---~~~~~------------------------~~g~~~ 86 (183)
T 3c85_A 38 GHAQVLILG-MGRIGTGAYDELRARYG---KISLGIEIREEA---AQQHR------------------------SEGRNV 86 (183)
T ss_dssp TTCSEEEEC-CSHHHHHHHHHHHHHHC---SCEEEEESCHHH---HHHHH------------------------HTTCCE
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHhccC---CeEEEEECCHHH---HHHHH------------------------HCCCCE
Confidence 467899998 599999999999998 8 456777775421 11111 134567
Q ss_pred EeccCCCCCCCCCchhhHHHH--hCCccEEEEcCc
Q 008324 90 VPGDISSEDLGLKDSNLKEEL--WNELDIMVNSAA 122 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l--~~~vdiViH~AA 122 (570)
+.||.+ +.+.+..+ .+++|+||.+..
T Consensus 87 ~~gd~~-------~~~~l~~~~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 87 ISGDAT-------DPDFWERILDTGHVKLVLLAMP 114 (183)
T ss_dssp EECCTT-------CHHHHHTBCSCCCCCEEEECCS
T ss_pred EEcCCC-------CHHHHHhccCCCCCCEEEEeCC
Confidence 889988 44444454 578999998765
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=96.37 E-value=0.0041 Score=57.95 Aligned_cols=37 Identities=14% Similarity=0.196 Sum_probs=32.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-.|++|+||||+|-+|..+++.+...| .+|++..|++
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G---~~V~~~~~~~ 73 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIG---ARIYTTAGSD 73 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHT---CEEEEEESSH
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcC---CEEEEEeCCH
Confidence 358999999999999999999998888 5788888753
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=96.27 E-value=0.018 Score=58.06 Aligned_cols=38 Identities=21% Similarity=0.260 Sum_probs=32.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~ 50 (570)
++||+++|+|| |-+|++++..|.+.|. .+|++..|+++
T Consensus 152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga--~~V~i~nR~~~ 189 (315)
T 3tnl_A 152 IIGKKMTICGA-GGAATAICIQAALDGV--KEISIFNRKDD 189 (315)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEECSST
T ss_pred ccCCEEEEECC-ChHHHHHHHHHHHCCC--CEEEEEECCCc
Confidence 57899999997 7899999999999873 58899999854
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=95.98 E-value=0.089 Score=52.91 Aligned_cols=107 Identities=18% Similarity=0.171 Sum_probs=69.4
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|+||+|.+|..++..|....+-+..+.++.++++ .. .+.+ ++... + ...++..+.+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~-~~-G~a~--Dl~~~----------~------~~~~v~~~~~ 60 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV-TP-GVAV--DLSHI----------P------TAVKIKGFSG 60 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTT-HH-HHHH--HHHTS----------C------SSEEEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCC-ch-hHHH--HhhCC----------C------CCceEEEecC
Confidence 58999999999999999888776233467888877662 11 1111 22110 0 0112322222
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
+ .+ ...++++|+||-+|+..+- ...-.+.++.|+.-.+.+.+.+.+.
T Consensus 61 ~----------~~--~~~~~~aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~ 108 (312)
T 3hhp_A 61 E----------DA--TPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKT 108 (312)
T ss_dssp S----------CC--HHHHTTCSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C----------Cc--HHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 11 2456899999999997643 3445667899999999999988875
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=95.97 E-value=0.0087 Score=59.19 Aligned_cols=33 Identities=21% Similarity=0.352 Sum_probs=24.7
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEE
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV 46 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lv 46 (570)
.++|.|+|+||.+|+.+++.+++. +++ ++...+
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~-~~~-elva~~ 37 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALAL-EGV-QLGAAL 37 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHS-TTE-ECCCEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhC-CCC-EEEEEE
Confidence 358999999999999999998753 343 444333
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=95.82 E-value=0.013 Score=55.63 Aligned_cols=73 Identities=15% Similarity=0.208 Sum_probs=50.2
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+|+|+ |.+|+.+++.|.+.+ ..|.++.+++... +++. + ..++.++.|
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g---~~v~vid~~~~~~---~~l~-------------~----------~~~~~~i~g 50 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRK---YGVVIINKDRELC---EEFA-------------K----------KLKATIIHG 50 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTT---CCEEEEESCHHHH---HHHH-------------H----------HSSSEEEES
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC---CeEEEEECCHHHH---HHHH-------------H----------HcCCeEEEc
Confidence 57999996 999999999999988 4567777653211 1111 0 135678999
Q ss_pred cCCCCCCCCCchhhHHHH-hCCccEEEEcCc
Q 008324 93 DISSEDLGLKDSNLKEEL-WNELDIMVNSAA 122 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l-~~~vdiViH~AA 122 (570)
|.+ +.+.++.+ ++++|+||-+..
T Consensus 51 d~~-------~~~~l~~a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 51 DGS-------HKEILRDAEVSKNDVVVILTP 74 (218)
T ss_dssp CTT-------SHHHHHHHTCCTTCEEEECCS
T ss_pred CCC-------CHHHHHhcCcccCCEEEEecC
Confidence 999 44544443 678999996543
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=95.73 E-value=0.013 Score=59.47 Aligned_cols=37 Identities=22% Similarity=0.079 Sum_probs=31.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-.|++|+||||+|-+|..+++.+...| .+|++..|+.
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G---~~V~~~~~~~ 180 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKG---CKVVGAAGSD 180 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCC---CEEEEEeCCH
Confidence 357899999999999999999998888 5788888754
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=95.71 E-value=0.018 Score=58.13 Aligned_cols=37 Identities=19% Similarity=0.094 Sum_probs=32.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-.|++|+||||+|.+|..++..+...| .+|++..|++
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G---~~V~~~~~~~ 175 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALG---AKLIGTVGTA 175 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHT---CEEEEEESSH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC---CEEEEEeCCH
Confidence 358999999999999999999999888 5788888864
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=95.64 E-value=0.025 Score=56.81 Aligned_cols=38 Identities=24% Similarity=0.302 Sum_probs=32.6
Q ss_pred cCCCE-EEEE-CCc-----------------chhHHHHHHHHHHhCCCccEEEEEEcCCC
Q 008324 10 LENKT-ILVS-GVT-----------------GFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (570)
Q Consensus 10 ~~~k~-VlIT-GaT-----------------GFlG~~LvekLl~~~~~V~~V~~lvR~~~ 50 (570)
++|++ |||| ||| |-+|.++++.+++.| ..|.++.|+..
T Consensus 34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~G---a~V~lv~g~~s 90 (313)
T 1p9o_A 34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAG---YGVLFLYRARS 90 (313)
T ss_dssp HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTT---CEEEEEEETTS
T ss_pred hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCC---CEEEEEecCCC
Confidence 57888 9999 677 999999999999999 67788888653
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.60 E-value=0.024 Score=57.82 Aligned_cols=39 Identities=8% Similarity=0.101 Sum_probs=33.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCc
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~ 51 (570)
-.|++|+|+||+|-+|..+++.+...| .+|++..|+...
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G---a~V~~~~~~~~~ 206 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMG---YRVLGIDGGEGK 206 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECSTTH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CcEEEEcCCHHH
Confidence 458999999999999999999888877 578888887643
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=95.57 E-value=0.053 Score=54.88 Aligned_cols=114 Identities=10% Similarity=0.029 Sum_probs=61.3
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++++|.|+|| |.+|..++..|+..+. +..|.++.+.+... +....++.... .+ ...+...
T Consensus 8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~-~~el~l~D~~~~k~---~g~a~DL~~~~--------------~~-~~~~~i~ 67 (326)
T 3vku_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGI-AQEIGIVDIFKDKT---KGDAIDLEDAL--------------PF-TSPKKIY 67 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSCHHHH---HHHHHHHHTTG--------------GG-SCCCEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEeCChHHH---HHHHhhHhhhh--------------hh-cCCcEEE
Confidence 3579999996 9999999999988763 35788877743211 11111221110 01 1233333
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
.+| . +.++++|+||++||..+- .+.-...++.|+.-.+.+.+.+.+. ..+.++.
T Consensus 68 ~~~----------~----~a~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~il 122 (326)
T 3vku_A 68 SAE----------Y----SDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDS-GFNGIFL 122 (326)
T ss_dssp ECC----------G----GGGTTCSEEEECCCCC----------------CHHHHHHHHHTT-TCCSEEE
T ss_pred ECc----------H----HHhcCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhc-CCceEEE
Confidence 332 1 335789999999997542 2334456889999999999988875 3344433
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=95.51 E-value=0.02 Score=58.02 Aligned_cols=37 Identities=8% Similarity=0.109 Sum_probs=32.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-.|++|+||||+|-+|..+++.+...| .+|++..|++
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G---~~Vi~~~~~~ 180 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLG---ATVIGTVSTE 180 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTT---CEEEEEESSH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCC---CEEEEEeCCH
Confidence 358899999999999999999998888 5788888864
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=95.46 E-value=0.029 Score=49.15 Aligned_cols=72 Identities=14% Similarity=0.187 Sum_probs=50.3
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|+|.|+ |.+|+.+++.|.+.| ..|.++.+++.. .+++. ...+..+.|
T Consensus 8 ~~viIiG~-G~~G~~la~~L~~~g---~~v~vid~~~~~---~~~~~------------------------~~g~~~i~g 56 (140)
T 3fwz_A 8 NHALLVGY-GRVGSLLGEKLLASD---IPLVVIETSRTR---VDELR------------------------ERGVRAVLG 56 (140)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTT---CCEEEEESCHHH---HHHHH------------------------HTTCEEEES
T ss_pred CCEEEECc-CHHHHHHHHHHHHCC---CCEEEEECCHHH---HHHHH------------------------HcCCCEEEC
Confidence 57999996 999999999999988 566777775422 11111 145678999
Q ss_pred cCCCCCCCCCchhhHHHH-hCCccEEEEcCc
Q 008324 93 DISSEDLGLKDSNLKEEL-WNELDIMVNSAA 122 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l-~~~vdiViH~AA 122 (570)
|.+ +++.++.+ ++++|+||-+..
T Consensus 57 d~~-------~~~~l~~a~i~~ad~vi~~~~ 80 (140)
T 3fwz_A 57 NAA-------NEEIMQLAHLECAKWLILTIP 80 (140)
T ss_dssp CTT-------SHHHHHHTTGGGCSEEEECCS
T ss_pred CCC-------CHHHHHhcCcccCCEEEEECC
Confidence 999 45544332 467899987654
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=95.43 E-value=0.088 Score=51.11 Aligned_cols=123 Identities=19% Similarity=0.090 Sum_probs=69.7
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHH--hh-hhhHHHHHhhhcccc
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEV--LA-KDVFNVLKEKWGTRL 79 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l--~~-~~~f~~l~~~~~~~~ 79 (570)
++-+++++|+|.|+ |-+|..+++.|.+.| |++|.++.+..-..+-..|-. +++ -+ ..+-+++++.+|
T Consensus 26 q~~l~~~~VlVvG~-Gg~G~~va~~La~~G--v~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np--- 99 (249)
T 1jw9_B 26 QEALKDSRVLIVGL-GGLGCAASQYLASAG--VGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINP--- 99 (249)
T ss_dssp HHHHHHCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT---
T ss_pred HHHHhCCeEEEEee-CHHHHHHHHHHHHcC--CCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCC---
Confidence 34567899999996 679999999999987 478888887752111110000 000 00 001123333332
Q ss_pred ccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
.-++..+..+++ +.+. ..+++++|+||.+... .+ .-..+.++|++. + ..+|+
T Consensus 100 ----~~~v~~~~~~~~-------~~~~-~~~~~~~DvVi~~~d~------~~--------~~~~l~~~~~~~-~-~p~i~ 151 (249)
T 1jw9_B 100 ----HIAITPVNALLD-------DAEL-AALIAEHDLVLDCTDN------VA--------VRNQLNAGCFAA-K-VPLVS 151 (249)
T ss_dssp ----TSEEEEECSCCC-------HHHH-HHHHHTSSEEEECCSS------HH--------HHHHHHHHHHHH-T-CCEEE
T ss_pred ----CcEEEEEeccCC-------HhHH-HHHHhCCCEEEEeCCC------HH--------HHHHHHHHHHHc-C-CCEEE
Confidence 135667777776 4333 4667899999987532 11 112345566664 3 34666
Q ss_pred Eecc
Q 008324 160 VSTA 163 (570)
Q Consensus 160 vSTa 163 (570)
.++.
T Consensus 152 ~~~~ 155 (249)
T 1jw9_B 152 GAAI 155 (249)
T ss_dssp EEEE
T ss_pred eeec
Confidence 6544
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=95.38 E-value=0.025 Score=57.90 Aligned_cols=37 Identities=16% Similarity=0.095 Sum_probs=32.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-.|++|+|+||+|-+|..++..+...| .+|++..|++
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~G---a~Vi~~~~~~ 205 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYG---LKILGTAGTE 205 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCh
Confidence 358899999999999999999888887 5788888864
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=95.38 E-value=0.053 Score=54.52 Aligned_cols=46 Identities=26% Similarity=0.304 Sum_probs=35.7
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHH
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF 58 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl 58 (570)
.+|++++|+|| |-+|+.++..|.+.|. .+|++..|++...+..+.+
T Consensus 146 l~gk~~lVlGA-GGaaraia~~L~~~G~--~~v~v~nRt~~~~~~a~~l 191 (312)
T 3t4e_A 146 MRGKTMVLLGA-GGAATAIGAQAAIEGI--KEIKLFNRKDDFFEKAVAF 191 (312)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEECSSTHHHHHHHH
T ss_pred cCCCEEEEECc-CHHHHHHHHHHHHcCC--CEEEEEECCCchHHHHHHH
Confidence 46899999997 7899999999999773 6889999985543333333
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=95.37 E-value=0.16 Score=51.35 Aligned_cols=114 Identities=12% Similarity=0.057 Sum_probs=71.1
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.++|.|+|+ |.+|..++..|+..+. +..|.++.+.+... +....++... .| +....+....
T Consensus 5 ~~kI~ViGa-G~vG~~~a~~l~~~~~-~~~l~l~D~~~~k~---~g~a~DL~~~---------~~-----~~~~~v~i~~ 65 (326)
T 3pqe_A 5 VNKVALIGA-GFVGSSYAFALINQGI-TDELVVIDVNKEKA---MGDVMDLNHG---------KA-----FAPQPVKTSY 65 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSCHHHH---HHHHHHHHHT---------GG-----GSSSCCEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-CceEEEEecchHHH---HHHHHHHHhc---------cc-----cccCCeEEEe
Confidence 578999996 9999999999998763 35788887743211 1111112111 01 1112333333
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
+| . ..++++|+||.+||..+- .+.-...+..|+.-.+.+.+.+.+. ..+.++.
T Consensus 66 ~~----------~----~a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~-~p~a~vl 119 (326)
T 3pqe_A 66 GT----------Y----EDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMAS-GFDGIFL 119 (326)
T ss_dssp EC----------G----GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEE
T ss_pred Cc----------H----HHhCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHh-cCCeEEE
Confidence 32 1 345789999999997543 2345566899999999999998885 3344443
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=95.33 E-value=0.012 Score=55.46 Aligned_cols=34 Identities=15% Similarity=0.178 Sum_probs=29.6
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
++|+|+||+|++|+.++..|++.+ .+|++..|+.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g---~~V~~~~r~~ 34 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLG---HEIVVGSRRE 34 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT---CEEEEEESSH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCC---CEEEEEeCCH
Confidence 479999999999999999999987 5778888864
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=95.32 E-value=0.028 Score=57.49 Aligned_cols=37 Identities=8% Similarity=-0.058 Sum_probs=32.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-.|++|+||||+|-+|..++..+...| .+|++..|+.
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G---a~Vi~~~~~~ 197 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAG---AIPLVTAGSQ 197 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcC---CEEEEEeCCH
Confidence 358899999999999999999988887 5788888864
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=95.28 E-value=0.019 Score=58.64 Aligned_cols=34 Identities=21% Similarity=0.291 Sum_probs=26.7
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEE
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV 46 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lv 46 (570)
++|+|.||||.+|+.+++.|++++..+..+.++.
T Consensus 7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~ 40 (340)
T 2hjs_A 7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLA 40 (340)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEE
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 5899999999999999999986654334555554
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.08 E-value=0.026 Score=58.31 Aligned_cols=36 Identities=11% Similarity=0.150 Sum_probs=31.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
+++++|+|+|+ |-+|+.+++.+...| .+|++..|+.
T Consensus 164 l~~~~V~ViGa-G~iG~~~a~~l~~~G---a~V~~~d~~~ 199 (369)
T 2eez_A 164 VAPASVVILGG-GTVGTNAAKIALGMG---AQVTILDVNH 199 (369)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCC---CEEEEEECCH
Confidence 56899999999 999999999999888 4778887754
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=95.01 E-value=0.29 Score=49.15 Aligned_cols=114 Identities=12% Similarity=0.043 Sum_probs=68.7
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|.|+|| |.+|..++..|+..+. +..|.++.+++...... ..++.....| ....+.....
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~-~~el~l~D~~~~k~~g~---a~DL~~~~~~--------------~~~~~~v~~~ 61 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDV-AKEVVMVDIKDGMPQGK---ALDMRESSPI--------------HGFDTRVTGT 61 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-SSEEEEECSSTTHHHHH---HHHHHHHHHH--------------HTCCCEEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCchHHHHHH---HHHHhccccc--------------cCCCcEEEEC
Confidence 58999996 9999999999998763 45888888876432211 1122111111 0112222211
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
| +. ..++++|+||-+|+..+- ...-...+..|+.-.+.+.+...+. ....++.
T Consensus 62 ~---------~~----~a~~~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vi 115 (314)
T 3nep_X 62 N---------DY----GPTEDSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEG-SPDSTII 115 (314)
T ss_dssp S---------SS----GGGTTCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTT-CTTCEEE
T ss_pred C---------CH----HHhCCCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEE
Confidence 2 11 335789999999987532 2233456899999999999988876 3344433
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=94.93 E-value=0.26 Score=47.74 Aligned_cols=118 Identities=11% Similarity=0.070 Sum_probs=71.0
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCc----------------ccHHHHHHHHHhhhhhHHH
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI----------------DSAALRFQNEVLAKDVFNV 70 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~----------------~~~~~rl~~~l~~~~~f~~ 70 (570)
++-+++++|+|.|+.| +|..+++.|.+.| |+++.++.+..-. ....+.+ -++
T Consensus 23 q~~l~~~~VlvvG~Gg-lG~~va~~La~~G--vg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~---------~~~ 90 (251)
T 1zud_1 23 QQKLLDSQVLIIGLGG-LGTPAALYLAGAG--VGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVS---------QQR 90 (251)
T ss_dssp HHHHHTCEEEEECCST-THHHHHHHHHHTT--CSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHH---------HHH
T ss_pred HHHHhcCcEEEEccCH-HHHHHHHHHHHcC--CCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHH---------HHH
Confidence 4567889999999755 9999999999987 5788887554311 1111111 133
Q ss_pred HHhhhccccccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHH
Q 008324 71 LKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKK 150 (570)
Q Consensus 71 l~~~~~~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~ 150 (570)
+++.+| .-++..+..+++ +++. ..++++.|+||.+... .+. -..+-++|.+
T Consensus 91 l~~~np-------~~~v~~~~~~~~-------~~~~-~~~~~~~DvVi~~~d~------~~~--------r~~l~~~~~~ 141 (251)
T 1zud_1 91 LTQLNP-------DIQLTALQQRLT-------GEAL-KDAVARADVVLDCTDN------MAT--------RQEINAACVA 141 (251)
T ss_dssp HHHHCT-------TSEEEEECSCCC-------HHHH-HHHHHHCSEEEECCSS------HHH--------HHHHHHHHHH
T ss_pred HHHHCC-------CCEEEEEeccCC-------HHHH-HHHHhcCCEEEECCCC------HHH--------HHHHHHHHHH
Confidence 443333 135666666666 4433 4677889999987432 211 1234556666
Q ss_pred ccCceEEEEEecceeec
Q 008324 151 CVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 151 ~~~l~~~V~vSTa~v~~ 167 (570)
. + ..+|+.++....|
T Consensus 142 ~-~-~p~i~~~~~g~~G 156 (251)
T 1zud_1 142 L-N-TPLITASAVGFGG 156 (251)
T ss_dssp T-T-CCEEEEEEEBTEE
T ss_pred h-C-CCEEEEeccccce
Confidence 3 3 4577776644333
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=94.86 E-value=0.29 Score=48.68 Aligned_cols=115 Identities=16% Similarity=0.043 Sum_probs=71.7
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|.|+|| |.||+.++-.|+.++ -+.++.++...+..... +. .+|.....| .......+.+
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~-~~~el~L~Di~~~~~~G-~a--~DL~h~~~~--------------~~~~~~i~~~ 61 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNL-DVDEIALVDIAEDLAVG-EA--MDLAHAAAG--------------IDKYPKIVGG 61 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHS-CCSEEEEECSSHHHHHH-HH--HHHHHHHGG--------------GTCCCEEEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCC-CCCEEEEEeCCCCcchh-hh--hhhhccccc--------------CCCCCeEecC
Confidence 58999995 999999999888765 56788888765421111 11 122211110 1112222222
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEE
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~v 160 (570)
+ +. +.+++.|+|+-.||..+- ...-.+.++.|..-.+.+.+.+.+. ..+.++.+
T Consensus 62 ~---------d~----~~~~~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~-~p~aivlv 116 (294)
T 2x0j_A 62 A---------DY----SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILV 116 (294)
T ss_dssp S---------CG----GGGTTCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEE
T ss_pred C---------CH----HHhCCCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhc-CCceEEEE
Confidence 1 11 235789999999997653 3456677999999999999988886 44444443
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=94.84 E-value=0.057 Score=54.98 Aligned_cols=37 Identities=19% Similarity=0.121 Sum_probs=31.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHh-CCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~-~~~V~~V~~lvR~~ 49 (570)
-.|++|+||||+|-+|..++..+... | .+|++..|++
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~G---a~Vi~~~~~~ 206 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSG---ATIIGVDVRE 206 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTC---CEEEEEESSH
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCC---CeEEEEcCCH
Confidence 36889999999999999999988888 7 5788888764
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=94.82 E-value=0.051 Score=54.76 Aligned_cols=37 Identities=19% Similarity=0.100 Sum_probs=31.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-.|++|+|+||+|-+|...+..+...| .+|++..|++
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~~~ 175 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALG---AKLIGTVSSP 175 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHT---CEEEEEESSH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCC---CEEEEEeCCH
Confidence 358999999999999999999888888 5788888764
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=94.81 E-value=0.24 Score=49.79 Aligned_cols=116 Identities=16% Similarity=0.118 Sum_probs=69.8
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.++|.|+|| |.+|..++-.|+..+. +.+|.++...+........ ++... . .+ ...+.+..
T Consensus 7 ~~KI~IiGa-G~vG~~~a~~l~~~~~-~~ev~L~Di~~~~~~g~~~---dl~~~-------------~-~~-~~~~~i~~ 66 (318)
T 1y6j_A 7 RSKVAIIGA-GFVGASAAFTMALRQT-ANELVLIDVFKEKAIGEAM---DINHG-------------L-PF-MGQMSLYA 66 (318)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTC-SSEEEEECCC---CCHHHH---HHTTS-------------C-CC-TTCEEEC-
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChHHHHHHHH---HHHHh-------------H-Hh-cCCeEEEE
Confidence 468999998 9999999999988763 4688888876543332110 11100 0 00 12222221
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEec
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~-f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vST 162 (570)
+ +. +.++++|+||.+|+... ........+..|+...+.+.+.+.+. +....|.+.|
T Consensus 67 ~----------~~----~a~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~t 123 (318)
T 1y6j_A 67 G----------DY----SDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVVS 123 (318)
T ss_dssp -----------CG----GGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEECS
T ss_pred C----------CH----HHhCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEec
Confidence 1 11 33689999999998753 22334456789999999999998886 4455555544
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=94.80 E-value=0.084 Score=53.53 Aligned_cols=40 Identities=15% Similarity=0.204 Sum_probs=33.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcc
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~ 52 (570)
-.|++|+|+||+|-+|...+..+...| .+|++..|+....
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~~~~~~ 182 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILN---FRLIAVTRNNKHT 182 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHT---CEEEEEESSSTTH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcC---CEEEEEeCCHHHH
Confidence 358999999999999999998888788 5788998877543
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=94.63 E-value=0.04 Score=56.32 Aligned_cols=38 Identities=18% Similarity=0.091 Sum_probs=31.6
Q ss_pred cCC--CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LEN--KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~--k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-.| ++|+||||+|-+|..++..+...|. .+|++..|+.
T Consensus 157 ~~g~~~~vlI~GasggiG~~~~~~a~~~Ga--~~Vi~~~~~~ 196 (357)
T 2zb4_A 157 TAGSNKTMVVSGAAGACGSVAGQIGHFLGC--SRVVGICGTH 196 (357)
T ss_dssp CTTSCCEEEESSTTBHHHHHHHHHHHHTTC--SEEEEEESCH
T ss_pred CCCCccEEEEECCCcHHHHHHHHHHHHCCC--CeEEEEeCCH
Confidence 357 9999999999999999998888772 2788888863
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=94.60 E-value=0.075 Score=54.02 Aligned_cols=39 Identities=21% Similarity=0.226 Sum_probs=32.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCc
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~ 51 (570)
-.|++|+|+||+|-+|...+..+...| .+|++..|++..
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~G---a~Vi~~~~~~~~ 196 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMG---AKVIAVVNRTAA 196 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSGGG
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC---CEEEEEeCCHHH
Confidence 358999999999999999998888877 578888886543
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=94.57 E-value=0.039 Score=55.84 Aligned_cols=37 Identities=19% Similarity=0.148 Sum_probs=31.7
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-.|++|+|+||+|-+|..++..+...| .+|++..|++
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~~~ 184 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKG---CRVVGIAGGA 184 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCH
Confidence 458999999999999999998888877 5788888764
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=94.55 E-value=0.026 Score=57.76 Aligned_cols=37 Identities=14% Similarity=0.334 Sum_probs=27.9
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCC----CccEEEEEEcC
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQP----NVKKLYLFVRA 48 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~----~V~~V~~lvR~ 48 (570)
+.++|+|.||||.+|+.|++.|+++.. .+ +|..+.+.
T Consensus 8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~-ei~~l~s~ 48 (352)
T 2nqt_A 8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRL-RIGALTAA 48 (352)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSE-EEEEEEES
T ss_pred cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccE-EEEEEECC
Confidence 346899999999999999999987530 43 56666543
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=94.46 E-value=0.49 Score=48.08 Aligned_cols=111 Identities=14% Similarity=0.096 Sum_probs=67.2
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCc-----cEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNV-----KKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V-----~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
+.-+|.|+||+|.||+.|+-.|.. ++-+ ..+.++..++... ..+-+.-++-... | .-
T Consensus 23 ~~vKVaViGAaG~IG~~la~~la~-~~l~~~~~~~eL~L~Di~~~~~-~~~Gva~DL~~~~-~---------------~~ 84 (345)
T 4h7p_A 23 SAVKVAVTGAAGQIGYALVPLIAR-GALLGPTTPVELRLLDIEPALK-ALAGVEAELEDCA-F---------------PL 84 (345)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHH-TTTTCTTCCEEEEEECCGGGHH-HHHHHHHHHHHTT-C---------------TT
T ss_pred CCCEEEEECcCcHHHHHHHHHHHh-ccccCCCCccEEEEECCCCccc-cchhhhhhhhhcC-c---------------cC
Confidence 345999999999999999987765 3222 2566666543211 1111111221100 0 01
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
....+.++ + ....++++|+||-+||..+- ...-.+.++.|..-.+.+.+...+.
T Consensus 85 ~~~~~~~~---------~---~~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~ 139 (345)
T 4h7p_A 85 LDKVVVTA---------D---PRVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAV 139 (345)
T ss_dssp EEEEEEES---------C---HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEcC---------C---hHHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhh
Confidence 11222221 1 12557899999999997653 3456677999999999999988774
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=94.39 E-value=0.067 Score=54.34 Aligned_cols=37 Identities=11% Similarity=0.006 Sum_probs=31.7
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-.|++|+|+||+|-+|..++..+...| .+|++..|++
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G---~~Vi~~~~~~ 201 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFG---ARVIATAGSE 201 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTT---CEEEEEESSH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCH
Confidence 358899999999999999999888877 5788888864
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=94.38 E-value=0.061 Score=54.37 Aligned_cols=37 Identities=8% Similarity=0.039 Sum_probs=31.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-.|++|+|+||+|-+|...+..+...| .+|++..|+.
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~~~ 183 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKG---AHTIAVASTD 183 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCH
Confidence 458999999999999999998888777 5788888854
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=94.35 E-value=0.045 Score=55.91 Aligned_cols=38 Identities=16% Similarity=0.219 Sum_probs=32.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~ 50 (570)
-.|++|+|+||+|-+|..++..+...| .+|++..|++.
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~G---a~Vi~~~~~~~ 203 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFG---AEVYATAGSTG 203 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSHH
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcC---CEEEEEeCCHH
Confidence 358899999999999999999888887 57888888653
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=94.29 E-value=0.63 Score=46.82 Aligned_cols=109 Identities=17% Similarity=0.137 Sum_probs=68.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++.++|.|+|| |.+|..++..|+..+. ..|.++.+++..... ...++.....+ ......+
T Consensus 3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~--~~v~l~Di~~~~~~g---~a~dL~~~~~~--------------~~~~~~v 62 (321)
T 3p7m_A 3 MARKKITLVGA-GNIGGTLAHLALIKQL--GDVVLFDIAQGMPNG---KALDLLQTCPI--------------EGVDFKV 62 (321)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTC--CEEEEECSSSSHHHH---HHHHHHTTHHH--------------HTCCCCE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCC--ceEEEEeCChHHHHH---HHHHHHhhhhh--------------cCCCcEE
Confidence 34679999995 9999999999988764 278888877643221 11122111100 0011112
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
...+ +. +.++++|+||.+|+..+- .......+..|+.-.+.+.+.+.+.
T Consensus 63 ~~t~---------d~----~a~~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~ 112 (321)
T 3p7m_A 63 RGTN---------DY----KDLENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHN 112 (321)
T ss_dssp EEES---------CG----GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEcC---------CH----HHHCCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHH
Confidence 1111 11 345789999999987542 2345566889999999999988876
|
| >2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A | Back alignment and structure |
|---|
Probab=93.89 E-value=0.51 Score=47.23 Aligned_cols=112 Identities=11% Similarity=0.076 Sum_probs=69.6
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|+|| |.+|..++-.|+..+. +..|.++.+.+... +....++.... + + ...+.+..+
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~-~~el~L~Di~~~k~---~g~a~dl~~~~---------~-----~-~~~~~v~~~ 60 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGV-AREVVLVDLDRKLA---QAHAEDILHAT---------P-----F-AHPVWVWAG 60 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSHHHH---HHHHHHHHTTG---------G-----G-SCCCEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChhHH---HHHHHHHHHhH---------h-----h-cCCeEEEEC
Confidence 58999998 9999999999988753 57888888753211 11111221110 0 0 123333322
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
| . +.++++|+||.+|+...- .......+..|+.-.+.+.+.+.+. +....+.
T Consensus 61 ~---------~-----~a~~~aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~ii 113 (310)
T 2xxj_A 61 S---------Y-----GDLEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEA-APEAVLL 113 (310)
T ss_dssp C---------G-----GGGTTEEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEE
T ss_pred C---------H-----HHhCCCCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHH-CCCcEEE
Confidence 1 1 235799999999987542 2334456788999999999888876 3444433
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=93.79 E-value=0.078 Score=52.73 Aligned_cols=38 Identities=8% Similarity=0.149 Sum_probs=32.1
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCc
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~ 51 (570)
.|++|+|+||+|-+|...+..+...| .+|++..|+...
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~G---a~Vi~~~~~~~~ 162 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMG---LRVLAAASRPEK 162 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTT---CEEEEEESSGGG
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH
Confidence 58999999999999999998887777 578888886543
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=93.72 E-value=0.059 Score=51.46 Aligned_cols=72 Identities=10% Similarity=0.065 Sum_probs=49.1
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
..++|+|.|+ |.+|+.+++.|.+.+ . |.++.|++... +.+ . .++.++
T Consensus 8 ~~~~viI~G~-G~~G~~la~~L~~~g---~-v~vid~~~~~~---~~~------------------------~-~~~~~i 54 (234)
T 2aef_A 8 KSRHVVICGW-SESTLECLRELRGSE---V-FVLAEDENVRK---KVL------------------------R-SGANFV 54 (234)
T ss_dssp --CEEEEESC-CHHHHHHHHHSTTSE---E-EEEESCGGGHH---HHH------------------------H-TTCEEE
T ss_pred CCCEEEEECC-ChHHHHHHHHHHhCC---e-EEEEECCHHHH---HHH------------------------h-cCCeEE
Confidence 4568999997 999999999998876 4 66666543211 111 0 347789
Q ss_pred eccCCCCCCCCCchhhHHHH-hCCccEEEEcCc
Q 008324 91 PGDISSEDLGLKDSNLKEEL-WNELDIMVNSAA 122 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l-~~~vdiViH~AA 122 (570)
.||.+ +.+.++.+ ++++|.||-+.+
T Consensus 55 ~gd~~-------~~~~l~~a~i~~ad~vi~~~~ 80 (234)
T 2aef_A 55 HGDPT-------RVSDLEKANVRGARAVIVDLE 80 (234)
T ss_dssp ESCTT-------CHHHHHHTTCTTCSEEEECCS
T ss_pred EcCCC-------CHHHHHhcCcchhcEEEEcCC
Confidence 99999 45544444 678999997654
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=93.55 E-value=0.28 Score=51.89 Aligned_cols=101 Identities=11% Similarity=0.195 Sum_probs=64.2
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCc--cEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNV--KKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V--~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.++|+|.| .|-||++++.+|+++. ++ .+|.+....+.+....+. .++.+
T Consensus 13 ~~rVlIIG-aGgVG~~va~lla~~~-dv~~~~I~vaD~~~~~~~~~~~---------------------------~g~~~ 63 (480)
T 2ph5_A 13 KNRFVILG-FGCVGQALMPLIFEKF-DIKPSQVTIIAAEGTKVDVAQQ---------------------------YGVSF 63 (480)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHHHHB-CCCGGGEEEEESSCCSCCHHHH---------------------------HTCEE
T ss_pred CCCEEEEC-cCHHHHHHHHHHHhCC-CCceeEEEEeccchhhhhHHhh---------------------------cCCce
Confidence 35799999 7889999999999974 33 467777665555433221 13456
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecce
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~ 164 (570)
+..+++..+ -.+.+..++++.|+|+|++-.. ....++++|.+. + +-|++|+-
T Consensus 64 ~~~~Vdadn----v~~~l~aLl~~~DvVIN~s~~~---------------~~l~Im~aclea-G---v~YlDTa~ 115 (480)
T 2ph5_A 64 KLQQITPQN----YLEVIGSTLEENDFLIDVSIGI---------------SSLALIILCNQK-G---ALYINAAT 115 (480)
T ss_dssp EECCCCTTT----HHHHTGGGCCTTCEEEECCSSS---------------CHHHHHHHHHHH-T---CEEEESSC
T ss_pred eEEeccchh----HHHHHHHHhcCCCEEEECCccc---------------cCHHHHHHHHHc-C---CCEEECCC
Confidence 666776321 1122334556679999965321 123578899987 3 56788874
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=93.50 E-value=0.4 Score=47.59 Aligned_cols=120 Identities=13% Similarity=0.158 Sum_probs=68.3
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhh---------hhhHHHHHhhhcc
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLA---------KDVFNVLKEKWGT 77 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~---------~~~f~~l~~~~~~ 77 (570)
++-+++++|+|.|+ |-+|..+++.|.+.| |.++.++.+..-..+-..|. ++. ...-++|++.+|.
T Consensus 31 q~kL~~~~VlVvGa-GGlGs~va~~La~aG--VG~i~lvD~D~Ve~sNL~Rq---~~~~~diG~~Ka~aa~~~L~~iNP~ 104 (292)
T 3h8v_A 31 YEKIRTFAVAIVGV-GGVGSVTAEMLTRCG--IGKLLLFDYDKVELANMNRL---FFQPHQAGLSKVQAAEHTLRNINPD 104 (292)
T ss_dssp -CGGGGCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEECCCBC---------------CCTTSBHHHHHHHHHHHHCTT
T ss_pred HHHHhCCeEEEECc-CHHHHHHHHHHHHcC--CCEEEEECCCccChhhcccc---cCChhhcCchHHHHHHHHHHhhCCC
Confidence 45678899999996 669999999999987 68888887765333333331 110 0112344444442
Q ss_pred ccccccCCceEEEeccCCCCCCCCCchhhHHHHh-----------CCccEEEEcCccCCccccHHHHHHHhHHHHHHHHH
Q 008324 78 RLNSFISEKITFVPGDISSEDLGLKDSNLKEELW-----------NELDIMVNSAAITKFDERYDVAFGINTLGVIHLVN 146 (570)
Q Consensus 78 ~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~-----------~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~ 146 (570)
-+|+.+..+++ +.+..+.++ +++|+|+.+.-. ... -..+-+
T Consensus 105 -------v~v~~~~~~l~-------~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn------~~~--------R~~in~ 156 (292)
T 3h8v_A 105 -------VLFEVHNYNIT-------TVENFQHFMDRISNGGLEEGKPVDLVLSCVDN------FEA--------RMTINT 156 (292)
T ss_dssp -------SEEEEECCCTT-------SHHHHHHHHHHHHHBSSSTTBCCSEEEECCSS------HHH--------HHHHHH
T ss_pred -------cEEEEecccCC-------cHHHHHHHhhhhcccccccCCCCCEEEECCcc------hhh--------hhHHHH
Confidence 46777777777 322233333 579999977432 221 123455
Q ss_pred HHHHccCceEEEEEec
Q 008324 147 FAKKCVKLKVFVHVST 162 (570)
Q Consensus 147 la~~~~~l~~~V~vST 162 (570)
+|.+. + +.+|+.+.
T Consensus 157 ~c~~~-~-~Pli~~gv 170 (292)
T 3h8v_A 157 ACNEL-G-QTWMESGV 170 (292)
T ss_dssp HHHHH-T-CCEEEEEE
T ss_pred HHHHh-C-CCEEEeee
Confidence 66664 3 35777654
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=93.50 E-value=0.091 Score=53.84 Aligned_cols=37 Identities=14% Similarity=0.137 Sum_probs=31.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-.|++|+|+||+|.+|..++..+...| .+|++..|++
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~G---a~Vi~~~~~~ 198 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAK---CHVIGTCSSD 198 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTT---CEEEEEESSH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCC---CEEEEEECCH
Confidence 458899999999999999998888777 4788888863
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=93.49 E-value=0.11 Score=51.39 Aligned_cols=38 Identities=13% Similarity=0.110 Sum_probs=32.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~ 50 (570)
.+|++++|+|| |-+|+.++..|.+.|. .+|++..|+..
T Consensus 125 l~~k~vlVlGa-GG~g~aia~~L~~~G~--~~v~i~~R~~~ 162 (283)
T 3jyo_A 125 AKLDSVVQVGA-GGVGNAVAYALVTHGV--QKLQVADLDTS 162 (283)
T ss_dssp CCCSEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSSHH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEECCHH
Confidence 57899999997 8899999999999873 57888888753
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=93.48 E-value=0.08 Score=53.70 Aligned_cols=37 Identities=16% Similarity=0.070 Sum_probs=31.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-.|++|+|+||+|-+|..++..+...| .+|++..|++
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G---~~V~~~~~~~ 190 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMG---CYVVGSAGSK 190 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCH
Confidence 358899999999999999999888877 5788888764
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=93.47 E-value=0.045 Score=56.27 Aligned_cols=34 Identities=24% Similarity=0.312 Sum_probs=26.2
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEE
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV 46 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lv 46 (570)
.+|.|.||||++|+.|++.|.++......+..+.
T Consensus 3 ~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~a 36 (366)
T 3pwk_A 3 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA 36 (366)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEE
T ss_pred cEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEE
Confidence 4899999999999999998887543334555554
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=93.47 E-value=0.64 Score=46.86 Aligned_cols=112 Identities=10% Similarity=0.020 Sum_probs=67.5
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|+|| |.+|..++-.|+..+ -+..|.++.+.+... +....++.... .+ ...+.+..+
T Consensus 10 ~KI~IiGa-G~vG~~la~~l~~~~-~~~el~L~Di~~~~~---~g~~~dl~~~~--------------~~-~~~~~i~~~ 69 (326)
T 2zqz_A 10 QKVILVGD-GAVGSSYAYAMVLQG-IAQEIGIVDIFKDKT---KGDAIDLSNAL--------------PF-TSPKKIYSA 69 (326)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHT-CCSEEEEECSCHHHH---HHHHHHHHTTG--------------GG-SCCCEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHcCC-CCCEEEEEeCCchHh---HHHHHHHHHHH--------------Hh-cCCeEEEEC
Confidence 58999998 999999999988765 356788887743211 11111121110 01 123333321
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
+ . +.++++|+||.+|+...- .......+..|+.-.+.+.+.+.+. .....+.
T Consensus 70 ~----------~----~a~~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~-~p~a~ii 122 (326)
T 2zqz_A 70 E----------Y----SDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDS-GFNGIFL 122 (326)
T ss_dssp C----------G----GGGGGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHH-TCCSEEE
T ss_pred C----------H----HHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEE
Confidence 1 1 235789999999987532 2334456788999999999888876 3444433
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=93.40 E-value=0.043 Score=56.42 Aligned_cols=37 Identities=14% Similarity=0.299 Sum_probs=28.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~ 48 (570)
++..+|.|.||||.+|+.+++.|+++ |++ ++..+.+.
T Consensus 14 M~~~kV~IiGAtG~iG~~llr~L~~~-p~~-elvai~~~ 50 (359)
T 1xyg_A 14 EKDIRIGLLGASGYTGAEIVRLLANH-PHF-QVTLMTAD 50 (359)
T ss_dssp -CCEEEEEECCSSHHHHHHHHHHHTC-SSE-EEEEEBCS
T ss_pred ccCcEEEEECcCCHHHHHHHHHHHcC-CCc-EEEEEeCc
Confidence 44568999999999999999999875 555 55566543
|
| >1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A | Back alignment and structure |
|---|
Probab=93.27 E-value=0.29 Score=53.77 Aligned_cols=126 Identities=14% Similarity=0.111 Sum_probs=73.7
Q ss_pred HHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHHh---hhhhHHHHHhhhccc
Q 008324 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEVL---AKDVFNVLKEKWGTR 78 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l~---~~~~f~~l~~~~~~~ 78 (570)
-++.+++.+|+|.|+ |-+|..+++.|.+.| |+++.++....-..+-..|-. +++- ....-+++++.+|
T Consensus 11 ~Q~kL~~s~VlVVGa-GGLGsevak~La~aG--VG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP-- 85 (640)
T 1y8q_B 11 LAEAVAGGRVLVVGA-GGIGCELLKNLVLTG--FSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYP-- 85 (640)
T ss_dssp HHHHHHHCEEEEECC-SHHHHHHHHHHHHHT--CCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCT--
T ss_pred HHHHHhcCeEEEECc-CHHHHHHHHHHHHcC--CCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCC--
Confidence 456677899999997 669999999999987 688888876542222111100 0000 0011234444443
Q ss_pred cccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEE
Q 008324 79 LNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 79 ~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V 158 (570)
.-+|..+..+++..+ ....+++++|+||.+... .. .-..+-++|.+. + ..+|
T Consensus 86 -----~v~V~a~~~~i~~~~-------~~~~~~~~~DlVvda~Dn------~~--------aR~~ln~~c~~~-~-iPlI 137 (640)
T 1y8q_B 86 -----KANIVAYHDSIMNPD-------YNVEFFRQFILVMNALDN------RA--------ARNHVNRMCLAA-D-VPLI 137 (640)
T ss_dssp -----TCEEEEEESCTTSTT-------SCHHHHTTCSEEEECCSC------HH--------HHHHHHHHHHHH-T-CCEE
T ss_pred -----CCeEEEEecccchhh-------hhHhhhcCCCEEEECCCC------HH--------HHHHHHHHHHHc-C-CCEE
Confidence 246778888887432 112567899999987432 21 223344566654 3 3567
Q ss_pred EEecce
Q 008324 159 HVSTAY 164 (570)
Q Consensus 159 ~vSTa~ 164 (570)
+.++..
T Consensus 138 ~~g~~G 143 (640)
T 1y8q_B 138 ESGTAG 143 (640)
T ss_dssp EEEEET
T ss_pred EEEEec
Confidence 766544
|
| >7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A* | Back alignment and structure |
|---|
Probab=93.26 E-value=0.96 Score=46.42 Aligned_cols=111 Identities=14% Similarity=0.122 Sum_probs=64.9
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccE---EEE--EEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKK---LYL--FVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~---V~~--lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
+..+|.|+||+|.||.+++-.|+..+ -+.. |.+ +..++.. ...+-..-+|.... | ++ ..
T Consensus 31 ~~~KV~ViGAaG~VG~~la~~l~~~~-l~~e~~~l~L~d~d~~~~~-~~~~G~amDL~h~~-~------------p~-~~ 94 (375)
T 7mdh_A 31 KLVNIAVSGAAGMISNHLLFKLASGE-VFGQDQPIALKLLGSERSF-QALEGVAMELEDSL-Y------------PL-LR 94 (375)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTT-TTCTTCCEEEEEECCGGGH-HHHHHHHHHHHTTT-C------------TT-EE
T ss_pred CCCEEEEECCCChHHHHHHHHHHcCC-cCCCCceeEEEecCccchh-hhhHHHHHhHHhhh-h------------hh-cC
Confidence 35689999999999999999998754 2222 433 2222211 11111111221110 0 00 11
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~-f~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
++.. + ..+ ...++++|+||-+||..+ -.+.-.+.++.|+.-.+.+.+.+.+.
T Consensus 95 ~v~i--~----------~~~--y~~~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~ 147 (375)
T 7mdh_A 95 EVSI--G----------IDP--YEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAV 147 (375)
T ss_dssp EEEE--E----------SCH--HHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEE--e----------cCC--HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 2222 1 111 255689999999998764 23455667999999999999888874
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=93.24 E-value=0.11 Score=52.73 Aligned_cols=34 Identities=24% Similarity=0.444 Sum_probs=27.2
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhC-CCccEEEEEE
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQ-PNVKKLYLFV 46 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~-~~V~~V~~lv 46 (570)
.++|.|.||||.+|+.+++.|+++. |++ ++.++.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~-elv~i~ 37 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVD-ELFLLA 37 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEE-EEEEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCE-EEEEEE
Confidence 3589999999999999999998864 554 455555
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=93.21 E-value=0.81 Score=45.41 Aligned_cols=114 Identities=14% Similarity=0.042 Sum_probs=69.8
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|.|+|| |.+|..++..|+..+. +..|.+..+++...... .+ ++.. ..+ .+ .....+...
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~-~~~v~L~D~~~~~~~g~-~~--dl~~---------~~~-~~----~~~~~i~~t 61 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLD-VDEIALVDIAEDLAVGE-AM--DLAH---------AAA-GI----DKYPKIVGG 61 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSC-CSEEEEECSSHHHHHHH-HH--HHHH---------HHH-TT----TCCCEEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEECChHHHHHH-HH--HHHh---------hhh-hc----CCCCEEEEe
Confidence 58999998 9999999999988763 34788888765322111 00 1100 000 00 111122211
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
+ + .+.++++|+||.+|+..+- .....+.+..|+.-.+.+.+.+.+. +...++.
T Consensus 62 ~---------d----~~a~~~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~ii 115 (294)
T 1oju_A 62 A---------D----YSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKIL 115 (294)
T ss_dssp S---------C----GGGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEE
T ss_pred C---------C----HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEE
Confidence 1 1 1445789999999987643 2345566899999999999988886 4444433
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=93.17 E-value=0.56 Score=47.12 Aligned_cols=113 Identities=11% Similarity=0.052 Sum_probs=66.3
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|+|| |.+|..++-.|+..+ -+..|.++.+.+... +....++.... + + ...+.+..
T Consensus 6 ~KI~IiGa-G~vG~~~a~~l~~~~-~~~el~L~Di~~~~~---~g~~~dl~~~~---------~-----~-~~~~~v~~- 64 (318)
T 1ez4_A 6 QKVVLVGD-GAVGSSYAFAMAQQG-IAEEFVIVDVVKDRT---KGDALDLEDAQ---------A-----F-TAPKKIYS- 64 (318)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHT-CCSEEEEECSSHHHH---HHHHHHHHGGG---------G-----G-SCCCEEEE-
T ss_pred CEEEEECC-CHHHHHHHHHHHcCC-CCCEEEEEeCCchHH---HHHHHHHHHHH---------H-----h-cCCeEEEE-
Confidence 68999998 999999999998875 356788887743211 11111221110 0 1 12333332
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEE
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~v 160 (570)
| +. +.++++|+||.+|+...- ...-...+..|+.-.+.+.+.+.+. +....+.+
T Consensus 65 ~---------~~----~a~~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv 119 (318)
T 1ez4_A 65 G---------EY----SDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLV 119 (318)
T ss_dssp C---------CG----GGGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHT-TCCSEEEE
T ss_pred C---------CH----HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEE
Confidence 2 11 335799999999987532 1222345788999999999888886 44444433
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=93.15 E-value=0.08 Score=54.07 Aligned_cols=34 Identities=21% Similarity=0.410 Sum_probs=27.0
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcC
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~ 48 (570)
++|.|.||||.+|+.+++.|+++ |++ ++..+.+.
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~-p~~-elv~v~s~ 38 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSH-PYL-EVKQVTSR 38 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTC-TTE-EEEEEBCS
T ss_pred CEEEEECCCCHHHHHHHHHHHcC-CCc-EEEEEECc
Confidence 58999999999999999998865 554 55555553
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=93.12 E-value=0.25 Score=51.64 Aligned_cols=73 Identities=14% Similarity=0.220 Sum_probs=51.1
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+++|+|.|+ |-+|+.+++.|.+.| ..|.++.+++... +.+. ...+.++.
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g---~~vvvId~d~~~v---~~~~------------------------~~g~~vi~ 52 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSG---VKMVVLDHDPDHI---ETLR------------------------KFGMKVFY 52 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTT---CCEEEEECCHHHH---HHHH------------------------HTTCCCEE
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCC---CCEEEEECCHHHH---HHHH------------------------hCCCeEEE
Confidence 467999996 999999999999988 4567776654221 1111 13466889
Q ss_pred ccCCCCCCCCCchhhHHHH-hCCccEEEEcCc
Q 008324 92 GDISSEDLGLKDSNLKEEL-WNELDIMVNSAA 122 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l-~~~vdiViH~AA 122 (570)
||.+ +.+.++.+ ++++++||-+..
T Consensus 53 GDat-------~~~~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 53 GDAT-------RMDLLESAGAAKAEVLINAID 77 (413)
T ss_dssp SCTT-------CHHHHHHTTTTTCSEEEECCS
T ss_pred cCCC-------CHHHHHhcCCCccCEEEECCC
Confidence 9999 55655444 578999987653
|
| >3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A | Back alignment and structure |
|---|
Probab=93.11 E-value=0.063 Score=54.72 Aligned_cols=34 Identities=24% Similarity=0.342 Sum_probs=26.4
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhC-CCccEEEEEE
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQ-PNVKKLYLFV 46 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~-~~V~~V~~lv 46 (570)
|.+|.|.||||++|..|++.|.++. |. .++..+.
T Consensus 1 ~~~VaIvGatG~vG~el~~lL~~h~fp~-~el~~~~ 35 (344)
T 3tz6_A 1 GLSIGIVGATGQVGQVMRTLLDERDFPA-SAVRFFA 35 (344)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCE-EEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCc-eEEEEEE
Confidence 4689999999999999999877763 44 3555554
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=93.00 E-value=0.93 Score=45.62 Aligned_cols=109 Identities=17% Similarity=0.169 Sum_probs=66.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++.++|.|+|| |.+|..++..|+..+. ..|.++.+.+...... ..++.....|. + ...++..
T Consensus 5 m~~~kI~viGa-G~vG~~~a~~l~~~~~--~~v~L~Di~~~~~~g~---~~dl~~~~~~~------~------~~~~v~~ 66 (324)
T 3gvi_A 5 MARNKIALIGS-GMIGGTLAHLAGLKEL--GDVVLFDIAEGTPQGK---GLDIAESSPVD------G------FDAKFTG 66 (324)
T ss_dssp -CCCEEEEECC-SHHHHHHHHHHHHTTC--CEEEEECSSSSHHHHH---HHHHHHHHHHH------T------CCCCEEE
T ss_pred CcCCEEEEECC-CHHHHHHHHHHHhCCC--CeEEEEeCCchhHHHH---HHHHhchhhhc------C------CCCEEEE
Confidence 45679999998 9999999999988774 2788888866432211 11221111000 0 0122221
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
..| . +.++++|+||.+|+..+- .......+..|+.-.+.+.+...+.
T Consensus 67 -t~d------------~--~a~~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~ 114 (324)
T 3gvi_A 67 -AND------------Y--AAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKY 114 (324)
T ss_dssp -ESS------------G--GGGTTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHH
T ss_pred -eCC------------H--HHHCCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHH
Confidence 122 1 345789999999987532 2223345788999999999888876
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=92.99 E-value=0.24 Score=50.32 Aligned_cols=37 Identities=14% Similarity=0.130 Sum_probs=31.2
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCc
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~ 51 (570)
+++|+|+||+|-+|...+..+...| .+|++..|++..
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~G---a~Vi~~~~~~~~ 201 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEG---FRPIVTVRRDEQ 201 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHT---CEEEEEESCGGG
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH
Confidence 4899999999999999998888888 578888886543
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=92.93 E-value=0.67 Score=46.84 Aligned_cols=115 Identities=16% Similarity=0.046 Sum_probs=70.0
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
....++|.|+|| |.+|..++..|+..+ -+..|.++.+..... +....++.....| .....
T Consensus 16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~-~~~el~L~Di~~~~~---~g~a~DL~~~~~~---------------~~~~~ 75 (331)
T 4aj2_A 16 QVPQNKITVVGV-GAVGMACAISILMKD-LADELALVDVIEDKL---KGEMMDLQHGSLF---------------LKTPK 75 (331)
T ss_dssp -CCSSEEEEECC-SHHHHHHHHHHHHTT-CCSEEEEECSCHHHH---HHHHHHHHHTGGG---------------CSCCE
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHhCC-CCceEEEEeCChHHH---HHHHHhhhhhhhc---------------cCCCe
Confidence 456789999997 999999999998876 335777777643211 1111122111111 01111
Q ss_pred EE-eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEE
Q 008324 89 FV-PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 89 ~v-~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V 158 (570)
.+ .+| . +.++++|+||.+||..+- .+.-.+.++.|+.-.+.+.+.+.+. ....++
T Consensus 76 i~~~~d----------~----~~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~v 132 (331)
T 4aj2_A 76 IVSSKD----------Y----SVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKY-SPQCKL 132 (331)
T ss_dssp EEECSS----------G----GGGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEE
T ss_pred EEEcCC----------H----HHhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH-CCCeEE
Confidence 22 222 1 235789999999997542 2334456899999999999888876 333333
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=92.88 E-value=1.2 Score=44.62 Aligned_cols=118 Identities=13% Similarity=0.139 Sum_probs=71.8
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+.++|.|+|| |.+|..++..|+..+. +..|.++.+.+. +++.+... +-+. .+ +....+.+.
T Consensus 5 ~~~KI~IIGa-G~vG~~la~~l~~~~~-~~ei~L~Di~~~------~~~g~~~d--l~~~----~~-----~~~~~~~v~ 65 (317)
T 3d0o_A 5 KGNKVVLIGN-GAVGSSYAFSLVNQSI-VDELVIIDLDTE------KVRGDVMD--LKHA----TP-----YSPTTVRVK 65 (317)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCS-CSEEEEECSCHH------HHHHHHHH--HHHH----GG-----GSSSCCEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChh------Hhhhhhhh--HHhh----hh-----hcCCCeEEE
Confidence 4579999998 9999999999988763 456777766431 22111000 0010 00 111233332
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEec
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vST 162 (570)
. | +. +.++++|+||-+|+...- .......+..|+.-.+.+.+.+.+. .....+.+.|
T Consensus 66 ~-~---------~~----~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~t 123 (317)
T 3d0o_A 66 A-G---------EY----SDCHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLVAT 123 (317)
T ss_dssp E-C---------CG----GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred e-C---------CH----HHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEec
Confidence 2 2 11 335789999999987542 3344556788999999999888886 4455555544
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=92.87 E-value=0.94 Score=45.39 Aligned_cols=109 Identities=16% Similarity=0.088 Sum_probs=67.7
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC-CcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA-DIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~-~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+.++|.|+|+ |.+|..++..|+..+. ..|.++.++. .... +-...++. +... ..+ ...++..
T Consensus 7 ~~~kv~ViGa-G~vG~~ia~~l~~~g~--~~v~l~D~~~~~~~~--~g~a~dl~-----~~~~-~~~------~~~~i~~ 69 (315)
T 3tl2_A 7 KRKKVSVIGA-GFTGATTAFLLAQKEL--ADVVLVDIPQLENPT--KGKALDML-----EASP-VQG------FDANIIG 69 (315)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTC--CEEEEECCGGGHHHH--HHHHHHHH-----HHHH-HHT------CCCCEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC--CeEEEEeccchHHHH--HHhhhhHH-----Hhhh-hcc------CCCEEEE
Confidence 4679999996 9999999999998773 4788887763 1111 11111221 1110 000 0122222
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
- .| . ..++++|+||-+|+..+- ...-...+..|+.-.+.+.+.+.+.
T Consensus 70 t-~d----------~----~a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~ 117 (315)
T 3tl2_A 70 T-SD----------Y----ADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKH 117 (315)
T ss_dssp E-SC----------G----GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred c-CC----------H----HHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 11 1 345789999999987643 2345567899999999999988875
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=92.86 E-value=0.12 Score=52.90 Aligned_cols=34 Identities=18% Similarity=0.286 Sum_probs=30.3
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
|++|+|+|| |-+|..++..+...| .+|++..|++
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~G---a~Vi~~~~~~ 214 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYG---LEVWMANRRE 214 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHT---CEEEEEESSC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCC---CEEEEEeCCc
Confidence 999999999 999999999888887 4788888876
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=92.73 E-value=0.78 Score=45.80 Aligned_cols=116 Identities=11% Similarity=0.057 Sum_probs=66.2
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|+|| |.+|..++..|+..+. + .|.++.+++.... ....++... ... .. ...++... .
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~-~-~v~L~Di~~~~~~---g~~~dl~~~-----~~~-~~------~~~~i~~t-~ 63 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKEL-G-DIVLLDIVEGVPQ---GKALDLYEA-----SPI-EG------FDVRVTGT-N 63 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-S-EEEEECSSSSHHH---HHHHHHHTT-----HHH-HT------CCCCEEEE-S
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCC-C-eEEEEeCCccHHH---HHHHhHHHh-----Hhh-cC------CCeEEEEC-C
Confidence 58999998 9999999999988763 2 4777766643221 111122111 000 00 01122221 2
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc-ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEec
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~-~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vST 162 (570)
| . +.++++|+||.+|+...-. .........|+...+.+.+.+.+. ....++.+.|
T Consensus 64 d------------~--~a~~~aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~vi~~t 119 (309)
T 1ur5_A 64 N------------Y--ADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPL-SPNAVIIMVN 119 (309)
T ss_dssp C------------G--GGGTTCSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGG-CTTCEEEECC
T ss_pred C------------H--HHHCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEcC
Confidence 2 1 2357899999999875321 112234678888889998888876 4555665554
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=92.69 E-value=0.23 Score=48.86 Aligned_cols=37 Identities=22% Similarity=0.450 Sum_probs=28.7
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
..+|.|.||+|.+|+.+++.+.+. +++.-|.++.|+.
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~-~~~eLv~~~d~~~ 43 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAA-PDATLVGALDRTG 43 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHC-TTEEEEEEBCCTT
T ss_pred ccEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEEecC
Confidence 358999999999999999999874 5654455566653
|
| >1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A* | Back alignment and structure |
|---|
Probab=92.67 E-value=0.99 Score=45.88 Aligned_cols=118 Identities=13% Similarity=0.110 Sum_probs=72.0
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC----------------cccHHHHHHHHHhhhhhHHH
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD----------------IDSAALRFQNEVLAKDVFNV 70 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~----------------~~~~~~rl~~~l~~~~~f~~ 70 (570)
++-+++.+|+|.|+ |-+|..+++.|.+.| |+++.++....- |....+. +-++
T Consensus 31 q~~L~~~~VlivG~-GGlG~~ia~~La~~G--vg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~---------~~~~ 98 (346)
T 1y8q_A 31 QKRLRASRVLLVGL-KGLGAEIAKNLILAG--VKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEA---------SLER 98 (346)
T ss_dssp HHHHHTCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHH---------HHHH
T ss_pred HHHHhCCeEEEECC-CHHHHHHHHHHHHcC--CCEEEEEECCCcchhhCCCCCccccccCcCCHHHH---------HHHH
Confidence 44567899999996 559999999999987 678888743221 1111111 1234
Q ss_pred HHhhhccccccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHH
Q 008324 71 LKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKK 150 (570)
Q Consensus 71 l~~~~~~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~ 150 (570)
|++.+|. -++..+..++++ .. ..+++++|+||.+... .+ .-..+-++|.+
T Consensus 99 l~~lnp~-------v~v~~~~~~~~~--------~~-~~~~~~~dvVv~~~d~------~~--------~r~~ln~~~~~ 148 (346)
T 1y8q_A 99 AQNLNPM-------VDVKVDTEDIEK--------KP-ESFFTQFDAVCLTCCS------RD--------VIVKVDQICHK 148 (346)
T ss_dssp HHHTCTT-------SEEEEECSCGGG--------CC-HHHHTTCSEEEEESCC------HH--------HHHHHHHHHHH
T ss_pred HHhHCCC-------eEEEEEecccCc--------ch-HHHhcCCCEEEEcCCC------HH--------HHHHHHHHHHH
Confidence 4444432 356777777652 11 3567899999986322 22 12345567777
Q ss_pred ccCceEEEEEecceeecC
Q 008324 151 CVKLKVFVHVSTAYVAGE 168 (570)
Q Consensus 151 ~~~l~~~V~vSTa~v~~~ 168 (570)
. + ..+|+.++....|.
T Consensus 149 ~-~-ip~i~~~~~G~~G~ 164 (346)
T 1y8q_A 149 N-S-IKFFTGDVFGYHGY 164 (346)
T ss_dssp T-T-CEEEEEEEEBTEEE
T ss_pred c-C-CCEEEEeecccEEE
Confidence 4 3 56888777655553
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=92.47 E-value=0.27 Score=49.87 Aligned_cols=34 Identities=21% Similarity=0.486 Sum_probs=26.6
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEE-EcC
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF-VRA 48 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~l-vR~ 48 (570)
.+|+|.||||++|+.|++.|.+ .|++ .+..+ .|+
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~-~p~~-el~~l~s~~ 39 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNR-HPHM-NITALTVSA 39 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHH-CTTE-EEEEEEEET
T ss_pred eEEEEECCCChHHHHHHHHHHh-CCCC-cEEEEEecC
Confidence 5899999999999999998876 4676 45545 444
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=92.45 E-value=0.3 Score=49.89 Aligned_cols=97 Identities=15% Similarity=0.125 Sum_probs=60.4
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHH---hhhhhHHHHHhhhcccc
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEV---LAKDVFNVLKEKWGTRL 79 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l---~~~~~f~~l~~~~~~~~ 79 (570)
++-+++++|+|.|+ |-+|..+++.|.+.| |.++.++.+..-..+-..|-. +++ -...+-+++++.+|.
T Consensus 113 q~~L~~~~VlvvG~-GglGs~va~~La~aG--vg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~-- 187 (353)
T 3h5n_A 113 QDKLKNAKVVILGC-GGIGNHVSVILATSG--IGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSE-- 187 (353)
T ss_dssp HHHHHTCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTT--
T ss_pred HHHHhCCeEEEECC-CHHHHHHHHHHHhCC--CCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCC--
Confidence 67788999999997 669999999999987 688988887642221111100 000 000112344444442
Q ss_pred ccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcC
Q 008324 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSA 121 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~A 121 (570)
-++..+..+++. ...... ++++|+|+.+.
T Consensus 188 -----v~v~~~~~~i~~-------~~~~~~-~~~~DlVvd~~ 216 (353)
T 3h5n_A 188 -----ISVSEIALNIND-------YTDLHK-VPEADIWVVSA 216 (353)
T ss_dssp -----SEEEEEECCCCS-------GGGGGG-SCCCSEEEECC
T ss_pred -----CeEEEeecccCc-------hhhhhH-hccCCEEEEec
Confidence 467778888874 221224 78899999975
|
| >3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A | Back alignment and structure |
|---|
Probab=92.26 E-value=0.26 Score=50.67 Aligned_cols=34 Identities=15% Similarity=0.317 Sum_probs=24.8
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCC-ccEEEEEE
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPN-VKKLYLFV 46 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~-V~~V~~lv 46 (570)
++|.|.||||++|..|+++||...|- ...+..+.
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~s 35 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFS 35 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEe
Confidence 47999999999999999966665551 23555443
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=91.83 E-value=0.32 Score=49.84 Aligned_cols=36 Identities=11% Similarity=0.206 Sum_probs=30.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
.++++|+|+|+ |-+|+.++..+...| .+|++..|+.
T Consensus 165 l~~~~VlViGa-GgvG~~aa~~a~~~G---a~V~v~dr~~ 200 (361)
T 1pjc_A 165 VKPGKVVILGG-GVVGTEAAKMAVGLG---AQVQIFDINV 200 (361)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCC---CEEEEEeCCH
Confidence 46789999998 999999999999887 4788888864
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=91.79 E-value=0.22 Score=50.37 Aligned_cols=36 Identities=8% Similarity=0.064 Sum_probs=29.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-.|++|+|+|| |-+|..++..+...| .+|+++.|+.
T Consensus 163 ~~g~~VlV~Ga-G~vG~~~~~~a~~~G---a~Vi~~~~~~ 198 (339)
T 1rjw_A 163 KPGEWVAIYGI-GGLGHVAVQYAKAMG---LNVVAVDIGD 198 (339)
T ss_dssp CTTCEEEEECC-STTHHHHHHHHHHTT---CEEEEECSCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcC---CEEEEEeCCH
Confidence 45899999999 669999998887777 5788888764
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=91.62 E-value=0.12 Score=55.86 Aligned_cols=36 Identities=25% Similarity=0.244 Sum_probs=27.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
++|++++|||| |-+|++++..|++.| .+|++..|+.
T Consensus 362 l~~k~vlV~Ga-GGig~aia~~L~~~G---~~V~i~~R~~ 397 (523)
T 2o7s_A 362 LASKTVVVIGA-GGAGKALAYGAKEKG---AKVVIANRTY 397 (523)
T ss_dssp ----CEEEECC-SHHHHHHHHHHHHHC---C-CEEEESSH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCC---CEEEEEECCH
Confidence 57899999999 689999999999998 3678888864
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=91.60 E-value=0.87 Score=45.96 Aligned_cols=118 Identities=14% Similarity=0.099 Sum_probs=68.7
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.++|.|.|| |.+|..++..|...+. ..|.+..+++..... ...++. +.+. ..+ ...++...
T Consensus 9 ~~kI~VIGa-G~vG~~lA~~la~~g~--~~V~L~D~~~~~~~~---~~~~l~-----~~~~-~~~------~~~~i~~t- 69 (331)
T 1pzg_A 9 RKKVAMIGS-GMIGGTMGYLCALREL--ADVVLYDVVKGMPEG---KALDLS-----HVTS-VVD------TNVSVRAE- 69 (331)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC--CEEEEECSSSSHHHH---HHHHHH-----HHHH-HTT------CCCCEEEE-
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC--CeEEEEECChhHHHH---HHHHHH-----hhhh-ccC------CCCEEEEe-
Confidence 468999998 9999999999998874 157777776533221 110110 1110 000 01222221
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cc-----cHHHHHHHhHHHHHHHHHHHHHccCceEEEEEec
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DE-----RYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~-----~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vST 162 (570)
.+ .++.++++|+||-+++...- .. .-......|+.-.+.+.+...+. ....++.+.|
T Consensus 70 ------------~d-~~ea~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~vi~~t 132 (331)
T 1pzg_A 70 ------------YS-YEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY-CPKTFIIVVT 132 (331)
T ss_dssp ------------CS-HHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECC
T ss_pred ------------CC-HHHHhCCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEEc
Confidence 12 22356899999999976532 22 22334677888888888888775 3344444443
|
| >3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=91.50 E-value=0.33 Score=50.01 Aligned_cols=34 Identities=15% Similarity=0.266 Sum_probs=25.2
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCC-ccEEEEEE
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPN-VKKLYLFV 46 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~-V~~V~~lv 46 (570)
.+|.|.||||++|..|+++||...|- ...+..+.
T Consensus 5 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~s 39 (377)
T 3uw3_A 5 MNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFS 39 (377)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEe
Confidence 58999999999999999966665541 23555443
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=91.48 E-value=0.35 Score=49.01 Aligned_cols=32 Identities=25% Similarity=0.373 Sum_probs=27.7
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF 45 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~l 45 (570)
.|++|+|+||+|-+|...+..+...| .+|++.
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~G---a~Vi~~ 181 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARG---ARVFAT 181 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCC---CEEEEE
Confidence 58899999999999999998888777 467777
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=91.48 E-value=0.085 Score=46.24 Aligned_cols=36 Identities=22% Similarity=0.166 Sum_probs=29.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
..+++|+|.|+ |.+|+.++..|.+.+ .+|++..|+.
T Consensus 19 ~~~~~v~iiG~-G~iG~~~a~~l~~~g---~~v~v~~r~~ 54 (144)
T 3oj0_A 19 NGGNKILLVGN-GMLASEIAPYFSYPQ---YKVTVAGRNI 54 (144)
T ss_dssp HCCCEEEEECC-SHHHHHHGGGCCTTT---CEEEEEESCH
T ss_pred ccCCEEEEECC-CHHHHHHHHHHHhCC---CEEEEEcCCH
Confidence 34899999995 999999999998866 3488888864
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=91.39 E-value=1.1 Score=45.07 Aligned_cols=114 Identities=15% Similarity=-0.024 Sum_probs=69.5
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
..++|.|+|| |.+|..++..|+..+. +..|.++.+.+... +....++.....| + ...++..
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~-~~ev~L~Di~~~~~---~g~a~DL~~~~~~-------~------~~~~i~~- 80 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDL-ADEVALVDVMEDKL---KGEMMDLEHGSLF-------L------HTAKIVS- 80 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCC-CSEEEEECSCHHHH---HHHHHHHHHHGGG-------S------CCSEEEE-
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEECCHHHH---HHHHHHhhhhhhc-------c------cCCeEEE-
Confidence 4579999998 9999999999998763 35778777643221 1111122111111 0 0122222
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEE
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V 158 (570)
.+|.. . ++++|+||-+||..+- .+.-.+.+..|+.-.+.+.+.+.+. +...++
T Consensus 81 t~d~~-------------~-~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~-~P~a~i 134 (330)
T 3ldh_A 81 GKDYS-------------V-SAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKH-SPDCLK 134 (330)
T ss_dssp ESSSC-------------S-CSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHH-CTTCEE
T ss_pred cCCHH-------------H-hCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCceE
Confidence 23432 2 4789999999987643 2233456788999999998888876 334433
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=91.34 E-value=0.13 Score=52.17 Aligned_cols=36 Identities=17% Similarity=0.116 Sum_probs=30.8
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
.|.+|+|+||+|-+|...+..+...| .+|++..+++
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~G---a~Vi~~~~~~ 185 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYG---LRVITTASRN 185 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEECCSH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcC---CEEEEEeCCH
Confidence 68999999999999999998887777 4788887754
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=91.18 E-value=0.19 Score=50.00 Aligned_cols=37 Identities=27% Similarity=0.336 Sum_probs=31.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
+++++|+|+|+ |-+|+.++..|++.|. .+|++..|+.
T Consensus 139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~--~~V~v~nR~~ 175 (297)
T 2egg_A 139 LDGKRILVIGA-GGGARGIYFSLLSTAA--ERIDMANRTV 175 (297)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTC--SEEEEECSSH
T ss_pred CCCCEEEEECc-HHHHHHHHHHHHHCCC--CEEEEEeCCH
Confidence 46899999997 7799999999998773 5788888864
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=91.16 E-value=0.21 Score=52.63 Aligned_cols=38 Identities=16% Similarity=0.137 Sum_probs=30.9
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
.-.|++|+|+||+|-+|...+..+...| .+|++.+++.
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~G---a~vi~~~~~~ 255 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNGG---GIPVAVVSSA 255 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcC---CEEEEEeCCH
Confidence 3468999999999999999988887777 5677777643
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.12 E-value=0.44 Score=48.83 Aligned_cols=35 Identities=17% Similarity=0.213 Sum_probs=28.7
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEc
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR 47 (570)
-.|.+|+|+||+|-+|...+..+...| .+|++..+
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~G---a~Vi~~~~ 216 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWD---AHVTAVCS 216 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEeC
Confidence 357899999999999999888777777 46777764
|
| >1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A* | Back alignment and structure |
|---|
Probab=90.87 E-value=0.57 Score=48.09 Aligned_cols=36 Identities=14% Similarity=0.337 Sum_probs=27.6
Q ss_pred CEEEEECCcchhHHHHHHHHHHhC-CCccEEEEEEcC
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQ-PNVKKLYLFVRA 48 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~-~~V~~V~~lvR~ 48 (570)
++|.|.||||++|+.|+++|+... ..+..|+++...
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~ 38 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTS 38 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeC
Confidence 589999999999999999666543 245577777654
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=90.78 E-value=0.43 Score=48.62 Aligned_cols=39 Identities=13% Similarity=0.117 Sum_probs=31.7
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcc
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~ 52 (570)
-.|.+|+|+|| |-+|...+..+...| .+|++..|++...
T Consensus 178 ~~g~~VlV~Ga-G~vG~~~~qlak~~G---a~Vi~~~~~~~~~ 216 (360)
T 1piw_A 178 GPGKKVGIVGL-GGIGSMGTLISKAMG---AETYVISRSSRKR 216 (360)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHHT---CEEEEEESSSTTH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEcCCHHHH
Confidence 35889999999 999999888777777 4688998876543
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=90.55 E-value=0.27 Score=49.92 Aligned_cols=36 Identities=14% Similarity=0.148 Sum_probs=29.7
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
.|.+|+|+|| |-+|..++..+...|. .+|++..|++
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga--~~Vi~~~~~~ 202 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGA--YPVIVSEPSD 202 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTC--CSEEEECSCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence 7899999999 9999999988777773 2678888764
|
| >1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=90.52 E-value=0.37 Score=49.09 Aligned_cols=32 Identities=16% Similarity=0.286 Sum_probs=26.1
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEE
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV 46 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lv 46 (570)
-+|.|.||||++|..|++.|.++ |.+ ++..+.
T Consensus 14 ~~V~IvGAtG~vG~ellrlL~~h-P~~-el~~l~ 45 (351)
T 1vkn_A 14 IRAGIIGATGYTGLELVRLLKNH-PEA-KITYLS 45 (351)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHC-TTE-EEEEEE
T ss_pred eEEEEECCCCHHHHHHHHHHHcC-CCc-EEEEEe
Confidence 48999999999999999999875 765 455544
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=90.49 E-value=0.54 Score=46.27 Aligned_cols=33 Identities=18% Similarity=0.345 Sum_probs=28.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF 45 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~l 45 (570)
++||+++|.|++|.+|+.++..|++.+ .+|.+.
T Consensus 158 l~Gk~vvVvGrs~iVG~p~A~lL~~~g---AtVtv~ 190 (285)
T 3p2o_A 158 LEGKDAVIIGASNIVGRPMATMLLNAG---ATVSVC 190 (285)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTT---CEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEE
Confidence 579999999999999999999999987 445544
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=90.32 E-value=0.27 Score=49.64 Aligned_cols=71 Identities=10% Similarity=0.063 Sum_probs=49.3
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.++|+|.|+ |-+|+.+++.|.+.+ . |.++.+++... + +. ..++.++.
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g---~-v~vid~~~~~~---~-~~------------------------~~~~~~i~ 161 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSE---V-FVLAEDENVRK---K-VL------------------------RSGANFVH 161 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSC---E-EEEESCGGGHH---H-HH------------------------HTTCEEEE
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCC---c-EEEEeCChhhh---h-HH------------------------hCCcEEEE
Confidence 458999996 999999999999876 4 56665543221 1 22 14678999
Q ss_pred ccCCCCCCCCCchhhHHHH-hCCccEEEEcCc
Q 008324 92 GDISSEDLGLKDSNLKEEL-WNELDIMVNSAA 122 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l-~~~vdiViH~AA 122 (570)
||.+ +++.++.+ ++++|.|+-+.+
T Consensus 162 gd~~-------~~~~L~~a~i~~a~~vi~~~~ 186 (336)
T 1lnq_A 162 GDPT-------RVSDLEKANVRGARAVIVDLE 186 (336)
T ss_dssp SCTT-------SHHHHHHTCSTTEEEEEECCS
T ss_pred eCCC-------CHHHHHhcChhhccEEEEcCC
Confidence 9999 55555444 678999987643
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=90.11 E-value=0.65 Score=45.53 Aligned_cols=37 Identities=24% Similarity=0.377 Sum_probs=31.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
++|++++|+|+ |-+|+.++..|.+.|. .+|++..|+.
T Consensus 118 l~~k~~lvlGa-Gg~~~aia~~L~~~G~--~~v~i~~R~~ 154 (272)
T 3pwz_A 118 LRNRRVLLLGA-GGAVRGALLPFLQAGP--SELVIANRDM 154 (272)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTCC--SEEEEECSCH
T ss_pred ccCCEEEEECc-cHHHHHHHHHHHHcCC--CEEEEEeCCH
Confidence 46899999997 7799999999999773 5788888865
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=89.99 E-value=0.5 Score=49.92 Aligned_cols=37 Identities=14% Similarity=0.121 Sum_probs=30.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-.|.+|+|+||+|-+|...+..+...| .+|+++++++
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~G---a~vi~~~~~~ 263 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGG---ANPICVVSSP 263 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC---CeEEEEECCH
Confidence 458899999999999999988887777 5677777653
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=89.90 E-value=4.7 Score=39.99 Aligned_cols=107 Identities=17% Similarity=0.072 Sum_probs=64.5
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|.|| |.+|..++..|.+.+. ...|.+..|++..... +..++... . . ... ...++... .
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~-g~~V~l~D~~~~~~~~---~~~~l~~~-~----~-~~~------~~~~i~~t-~ 62 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQL-ARELVLLDVVEGIPQG---KALDMYES-G----P-VGL------FDTKVTGS-N 62 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSSSHHHH---HHHHHHTT-H----H-HHT------CCCEEEEE-S
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChhHHHH---HHHhHHhh-h----h-ccc------CCcEEEEC-C
Confidence 47999998 9999999999987522 2678888887643221 11111110 0 0 000 01122211 1
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
| . +. ++++|+||-+++.... .......+..|+.-.+.+.+.+.+.
T Consensus 63 d------------~-~~-l~~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~ 108 (310)
T 1guz_A 63 D------------Y-AD-TANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKH 108 (310)
T ss_dssp C------------G-GG-GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C------------H-HH-HCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 1 13 5789999999986433 2234556788999999998888775
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=89.83 E-value=0.7 Score=46.74 Aligned_cols=106 Identities=18% Similarity=0.130 Sum_probs=60.2
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHH--h-hhhhHHHHHhhhccccc
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEV--L-AKDVFNVLKEKWGTRLN 80 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l--~-~~~~f~~l~~~~~~~~~ 80 (570)
+-+++++|+|.|+ |-+|..+++.|.+.| |+++.++.+..-..+-..|.. +++ . ....-+++++.+|.
T Consensus 30 ~kL~~~~VlIvGa-GGlGs~va~~La~aG--Vg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~--- 103 (340)
T 3rui_A 30 DIIKNTKVLLLGA-GTLGCYVSRALIAWG--VRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPL--- 103 (340)
T ss_dssp HHHHTCEEEEECC-SHHHHHHHHHHHHTT--CCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTT---
T ss_pred HHHhCCEEEEECC-CHHHHHHHHHHHHcC--CCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCC---
Confidence 4567899999996 669999999999976 688888876542111111100 000 0 00011344444432
Q ss_pred cccCCceEEEeccCCCCCCCCCc-------hhhHHHHhCCccEEEEcCcc
Q 008324 81 SFISEKITFVPGDISSEDLGLKD-------SNLKEELWNELDIMVNSAAI 123 (570)
Q Consensus 81 ~~~~~kv~~v~gDl~~~~lgls~-------~~~~~~l~~~vdiViH~AA~ 123 (570)
-++..+..++..++.-+++ .+....++++.|+||.+.-.
T Consensus 104 ----v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn 149 (340)
T 3rui_A 104 ----MDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDS 149 (340)
T ss_dssp ----CEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSS
T ss_pred ----CEEEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCC
Confidence 3566666666433322221 22234677889999998543
|
| >4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A | Back alignment and structure |
|---|
Probab=89.74 E-value=0.7 Score=50.31 Aligned_cols=106 Identities=18% Similarity=0.130 Sum_probs=61.1
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHH--h-hhhhHHHHHhhhccccc
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEV--L-AKDVFNVLKEKWGTRLN 80 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l--~-~~~~f~~l~~~~~~~~~ 80 (570)
+-+++++|+|.|+ |-+|..+++.|.+.| |+++.++.+..-..+-..|.. +++ . ....-++|++.+|.
T Consensus 322 ekL~~arVLIVGa-GGLGs~vA~~La~aG--VG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~--- 395 (615)
T 4gsl_A 322 DIIKNTKVLLLGA-GTLGCYVSRALIAWG--VRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPL--- 395 (615)
T ss_dssp HHHHTCEEEEECC-SHHHHHHHHHHHHTT--CCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTT---
T ss_pred HHHhCCeEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCC---
Confidence 3577899999996 569999999999976 688988877652211111100 000 0 00112344444442
Q ss_pred cccCCceEEEeccCCCCCCCCCc-------hhhHHHHhCCccEEEEcCcc
Q 008324 81 SFISEKITFVPGDISSEDLGLKD-------SNLKEELWNELDIMVNSAAI 123 (570)
Q Consensus 81 ~~~~~kv~~v~gDl~~~~lgls~-------~~~~~~l~~~vdiViH~AA~ 123 (570)
-+++.+..++..++.-+++ .+....++++.|+||.+...
T Consensus 396 ----V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn 441 (615)
T 4gsl_A 396 ----MDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDS 441 (615)
T ss_dssp ----CEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSS
T ss_pred ----cEEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCC
Confidence 3566676666433322211 22234667889999998543
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=89.65 E-value=0.66 Score=47.38 Aligned_cols=36 Identities=17% Similarity=0.202 Sum_probs=29.8
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~ 50 (570)
.|.+|+|+|+ |-+|..++..+...| .+|++..|+..
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~G---a~Vi~~~~~~~ 222 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFG---SKVTVISTSPS 222 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCGG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEeCCHH
Confidence 6899999996 899999998887777 47888887653
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=89.56 E-value=0.38 Score=48.15 Aligned_cols=36 Identities=11% Similarity=0.099 Sum_probs=29.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~ 48 (570)
-.|.+|+|+||+|-+|...+.-+...| .+|++..++
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~G---a~vi~~~~~ 186 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKG---TTVITTASK 186 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEECH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcC---CEEEEEecc
Confidence 468999999999999999998887777 467777653
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=89.05 E-value=1.5 Score=43.56 Aligned_cols=112 Identities=14% Similarity=0.065 Sum_probs=61.3
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|+|| |.+|..++..|+..+. +..|.++.+++... +....++.. ..+ + ...+....+
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g~-~~eV~L~D~~~~~~---~~~~~~l~~---------~~~-----~-~~~~~i~~~ 60 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRGS-CSELVLVDRDEDRA---QAEAEDIAH---------AAP-----V-SHGTRVWHG 60 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSHHHH---HHHHHHHTT---------SCC-----T-TSCCEEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCHHHH---HHHHHhhhh---------hhh-----h-cCCeEEEEC
Confidence 57999998 9999999999988773 34788887763211 111101100 000 0 012222111
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~-f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
| . +.++++|+||-+++... ........+..|+...+.+.+...+. .....+.
T Consensus 61 ~----------~----~a~~~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi 113 (304)
T 2v6b_A 61 G----------H----SELADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLL 113 (304)
T ss_dssp C----------G----GGGTTCSEEEECC------------CHHHHHHHHHHHHHHHHHH-CSSSEEE
T ss_pred C----------H----HHhCCCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEE
Confidence 1 1 23578999999997543 12223345678999989998888775 3344433
|
| >3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A | Back alignment and structure |
|---|
Probab=89.05 E-value=0.72 Score=50.13 Aligned_cols=96 Identities=19% Similarity=0.129 Sum_probs=59.5
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCc----------------ccHHHHHHHHHhhhhhHHHH
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI----------------DSAALRFQNEVLAKDVFNVL 71 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~----------------~~~~~rl~~~l~~~~~f~~l 71 (570)
+-+++++|+|.|+ |-+|..+++.|.+.| |++|.++....-. ....+.. -++|
T Consensus 323 ~kL~~~kVLIVGa-GGLGs~va~~La~aG--VG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaa---------a~~L 390 (598)
T 3vh1_A 323 DIIKNTKVLLLGA-GTLGCYVSRALIAWG--VRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELA---------AASL 390 (598)
T ss_dssp HHHHTCEEEEECC-SHHHHHHHHHHHTTT--CCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHH---------HHHH
T ss_pred HHHhCCeEEEECC-CHHHHHHHHHHHHcC--CCEEEEECCCcccccccccccccchhhcCcHHHHHH---------HHHH
Confidence 5577899999996 559999999999876 6888888544211 1111111 1344
Q ss_pred HhhhccccccccCCceEEEeccCCCCCCCCC-------chhhHHHHhCCccEEEEcCc
Q 008324 72 KEKWGTRLNSFISEKITFVPGDISSEDLGLK-------DSNLKEELWNELDIMVNSAA 122 (570)
Q Consensus 72 ~~~~~~~~~~~~~~kv~~v~gDl~~~~lgls-------~~~~~~~l~~~vdiViH~AA 122 (570)
++.+|. -+++.+..++..|+..++ +.+....++++.|+||.+.-
T Consensus 391 ~~iNP~-------v~v~~~~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatD 441 (598)
T 3vh1_A 391 KRIFPL-------MDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD 441 (598)
T ss_dssp HHHCTT-------CEEEEECCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCS
T ss_pred HhHCCC-------cEEEEEeccccccCcccccccccccCHHHHHHHHhcCCEEEECCC
Confidence 444432 456667766644443332 12333467788999999754
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=88.82 E-value=2.3 Score=42.52 Aligned_cols=107 Identities=14% Similarity=0.109 Sum_probs=64.0
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.++|.|+|| |.+|..++..|+..+. +.+|+++.+++.. .+....++. +. .+ .....+.+..
T Consensus 6 ~~kI~IIGa-G~vG~sla~~l~~~~~-~~ev~l~Di~~~~---~~~~~~dl~-----~~----~~-----~~~~~~~i~~ 66 (316)
T 1ldn_A 6 GARVVVIGA-GFVGASYVFALMNQGI-ADEIVLIDANESK---AIGDAMDFN-----HG----KV-----FAPKPVDIWH 66 (316)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHH---HHHHHHHHH-----HH----TT-----SSSSCCEEEE
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCC-CCEEEEEeCCcch---HHHHHhhHH-----HH----hh-----hcCCCeEEEc
Confidence 368999998 9999999999888763 4678888876421 111111111 10 00 0111333332
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc-ccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~-~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
| +. ..++++|+||-+|+...-. ......+..|..-.+.+.+.+.+.
T Consensus 67 -~---------~~----~al~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~ 113 (316)
T 1ldn_A 67 -G---------DY----DDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS 113 (316)
T ss_dssp -C---------CG----GGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH
T ss_pred -C---------cH----HHhCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHH
Confidence 1 11 2357899999998875321 112334677888888888877775
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=88.61 E-value=0.91 Score=44.62 Aligned_cols=33 Identities=18% Similarity=0.223 Sum_probs=28.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF 45 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~l 45 (570)
++||+++|.|++|.+|+.++..|++.+ .+|++.
T Consensus 159 l~Gk~vvVIG~s~iVG~p~A~lL~~~g---AtVtv~ 191 (285)
T 3l07_A 159 TEGAYAVVVGASNVVGKPVSQLLLNAK---ATVTTC 191 (285)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTT---CEEEEE
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCC---CeEEEE
Confidence 579999999999999999999999987 445544
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=88.59 E-value=0.39 Score=47.28 Aligned_cols=38 Identities=21% Similarity=0.326 Sum_probs=31.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~ 50 (570)
++|++|+|+|+ |-+|+.++..|.+.|. .+|++..|+..
T Consensus 115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~--~~v~v~~R~~~ 152 (277)
T 3don_A 115 IEDAYILILGA-GGASKGIANELYKIVR--PTLTVANRTMS 152 (277)
T ss_dssp GGGCCEEEECC-SHHHHHHHHHHHTTCC--SCCEEECSCGG
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEeCCHH
Confidence 46899999996 7899999999999874 46788888754
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=88.48 E-value=0.88 Score=46.53 Aligned_cols=38 Identities=16% Similarity=0.141 Sum_probs=29.7
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCc
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~ 51 (570)
-.|.+|+|+|| |-+|...+.-+...| .+|+++.+++..
T Consensus 193 ~~g~~VlV~Ga-G~vG~~aiqlak~~G---a~Vi~~~~~~~~ 230 (369)
T 1uuf_A 193 GPGKKVGVVGI-GGLGHMGIKLAHAMG---AHVVAFTTSEAK 230 (369)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESSGGG
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEeCCHHH
Confidence 35889999998 779999887776666 468888886543
|
| >1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A* | Back alignment and structure |
|---|
Probab=88.20 E-value=0.69 Score=49.90 Aligned_cols=126 Identities=10% Similarity=0.091 Sum_probs=70.6
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHh-h---------hhhHHHHHhhhc
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVL-A---------KDVFNVLKEKWG 76 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~-~---------~~~f~~l~~~~~ 76 (570)
++-+++.+|+|.|+ |-+|..+++.|.+.| |+++.++....-..+-..| +.+ . ...-++|++.+|
T Consensus 27 q~~L~~~~VlvvG~-GGlGseiak~La~aG--Vg~itlvD~D~Ve~sNL~R---Q~l~~~~dvG~~Ka~~a~~~l~~lNp 100 (531)
T 1tt5_A 27 QEALESAHVCLINA-TATGTEILKNLVLPG--IGSFTIIDGNQVSGEDAGN---NFFLQRSSIGKNRAEAAMEFLQELNS 100 (531)
T ss_dssp HHHHHHCEEEEECC-SHHHHHHHHHHHTTT--CSEEEEECCCBBCHHHHHH---CTTCCGGGBTSBHHHHHHHHHHTTCT
T ss_pred HHHHhcCeEEEECc-CHHHHHHHHHHHHcC--CCeEEEEeCCEechhhccc---CccCChhhcCcHHHHHHHHHHHHhCC
Confidence 34566789999997 559999999999976 6888877654422222222 111 0 011234444443
Q ss_pred cccccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceE
Q 008324 77 TRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKV 156 (570)
Q Consensus 77 ~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~ 156 (570)
. -++..+..++++. .+....++++.|+||.+.. +... -..+-++|.+. + ..
T Consensus 101 ~-------v~v~~~~~~~~~~------~~~~~~~~~~~DvVi~~~d------~~~~--------r~~ln~~c~~~-~-ip 151 (531)
T 1tt5_A 101 D-------VSGSFVEESPENL------LDNDPSFFCRFTVVVATQL------PEST--------SLRLADVLWNS-Q-IP 151 (531)
T ss_dssp T-------SBCCEESSCHHHH------HHSCGGGGGGCSEEEEESC------CHHH--------HHHHHHHHHHT-T-CC
T ss_pred C-------CeEEEeCCCcchh------hhhhHHHhcCCCEEEEeCC------CHHH--------HHHHHHHHHHc-C-CC
Confidence 2 3455555554310 0111245678999998732 2222 22344667764 3 56
Q ss_pred EEEEecceeec
Q 008324 157 FVHVSTAYVAG 167 (570)
Q Consensus 157 ~V~vSTa~v~~ 167 (570)
+|+.++....|
T Consensus 152 lI~~~~~G~~G 162 (531)
T 1tt5_A 152 LLICRTYGLVG 162 (531)
T ss_dssp EEEEEEETTEE
T ss_pred EEEEEecCCeE
Confidence 88887755444
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=88.13 E-value=6 Score=39.42 Aligned_cols=105 Identities=13% Similarity=0.086 Sum_probs=63.2
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|.|| |.+|..++..|++.+. ...|.+..|++... +.+..++- ...+ + .....+...
T Consensus 1 mkI~VIGa-G~~G~~la~~l~~~g~-~~~V~l~D~~~~~~---~~~~~~l~---------~~~~--~----~~~~~i~~~ 60 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALLMKGF-AREMVLIDVDKKRA---EGDALDLI---------HGTP--F----TRRANIYAG 60 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHHH---HHHHHHHH---------HHGG--G----SCCCEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEeCChHHH---HHHHHHHH---------hhhh--h----cCCcEEEeC
Confidence 47999998 9999999999999884 34788888764221 11111110 0000 0 011111111
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc-ccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~-~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
| . ..++++|+||-+++..... ..-......|+.-.+.+++...+.
T Consensus 61 d----------~----~~~~~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~ 106 (319)
T 1a5z_A 61 D----------Y----ADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKY 106 (319)
T ss_dssp C----------G----GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C----------H----HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 1 1 2347899999998865422 123345778888888888888775
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=87.82 E-value=0.94 Score=44.54 Aligned_cols=33 Identities=15% Similarity=0.147 Sum_probs=28.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF 45 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~l 45 (570)
++||+++|.|++|.+|+.++..|++.+ .+|++.
T Consensus 159 l~Gk~vvVvGrs~iVG~plA~lL~~~g---AtVtv~ 191 (286)
T 4a5o_A 159 LYGMDAVVVGASNIVGRPMALELLLGG---CTVTVT 191 (286)
T ss_dssp CTTCEEEEECTTSTTHHHHHHHHHHTT---CEEEEE
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCC---CeEEEE
Confidence 579999999999999999999999987 455544
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=87.73 E-value=0.64 Score=47.87 Aligned_cols=36 Identities=11% Similarity=0.058 Sum_probs=30.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
..|++|+|+|+ |-+|+.+++.+...| .+|++..|+.
T Consensus 166 l~g~~V~ViG~-G~iG~~~a~~a~~~G---a~V~~~d~~~ 201 (377)
T 2vhw_A 166 VEPADVVVIGA-GTAGYNAARIANGMG---ATVTVLDINI 201 (377)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCC---CEEEEEeCCH
Confidence 57899999998 999999999999877 4678887754
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=87.67 E-value=0.54 Score=45.95 Aligned_cols=36 Identities=17% Similarity=0.200 Sum_probs=31.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
++|++|+|+|+ |-+|+.++..|++.| .+|++..|+.
T Consensus 117 l~~k~vlViGa-Gg~g~a~a~~L~~~G---~~V~v~~R~~ 152 (271)
T 1nyt_A 117 RPGLRILLIGA-GGASRGVLLPLLSLD---CAVTITNRTV 152 (271)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSSH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHcC---CEEEEEECCH
Confidence 47899999998 679999999999988 6788887864
|
| >2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=87.65 E-value=5.5 Score=39.57 Aligned_cols=105 Identities=16% Similarity=0.104 Sum_probs=64.3
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
+|.|+|| |.+|..++..|+..+. ..|.++.+++..... ...++.....+ .+. ..++... +|
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~~l--~el~L~Di~~~~~~g---~~~dl~~~~~~------~~~------~~~i~~t-~d 61 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMRGY--DDLLLIARTPGKPQG---EALDLAHAAAE------LGV------DIRISGS-NS 61 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTC--SCEEEECSSTTHHHH---HHHHHHHHHHH------HTC------CCCEEEE-SC
T ss_pred CEEEECc-CHHHHHHHHHHHhCCC--CEEEEEcCChhhHHH---HHHHHHHhhhh------cCC------CeEEEEC-CC
Confidence 5889998 9999999999887753 468888887533221 11122111000 000 1122211 22
Q ss_pred CCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 94 ISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 94 l~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
. +.++++|+||-+|+..+- .......+..|+.-.+.+.+.+.+.
T Consensus 62 ------------~--~a~~~aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~ 106 (308)
T 2d4a_B 62 ------------Y--EDMRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAY 106 (308)
T ss_dssp ------------G--GGGTTCSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------------H--HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 235789999999887542 2233455788999999999888875
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=87.47 E-value=1.1 Score=44.40 Aligned_cols=35 Identities=11% Similarity=0.214 Sum_probs=29.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEc
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR 47 (570)
++||+++|.|++|.+|+.++..|++.+ ..|++.-|
T Consensus 163 l~Gk~vvVIG~s~iVG~p~A~lL~~~g---AtVtv~~~ 197 (300)
T 4a26_A 163 MAGKRAVVLGRSNIVGAPVAALLMKEN---ATVTIVHS 197 (300)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTT---CEEEEECT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEeC
Confidence 579999999999999999999999988 45665544
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=87.34 E-value=1.6 Score=44.57 Aligned_cols=35 Identities=14% Similarity=-0.029 Sum_probs=28.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEc
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR 47 (570)
-.|.+|+|+||+|-+|...+.-+...| .+|++.++
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~G---a~Vi~~~~ 197 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSG---YIPIATCS 197 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeC
Confidence 468899999999999999888887777 46676653
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=87.32 E-value=1 Score=45.80 Aligned_cols=36 Identities=17% Similarity=0.139 Sum_probs=29.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-.|.+|+|+| +|-+|...+..+...| .+|++..+++
T Consensus 188 ~~g~~VlV~G-~G~vG~~a~qla~~~G---a~Vi~~~~~~ 223 (363)
T 3uog_A 188 RAGDRVVVQG-TGGVALFGLQIAKATG---AEVIVTSSSR 223 (363)
T ss_dssp CTTCEEEEES-SBHHHHHHHHHHHHTT---CEEEEEESCH
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcC---CEEEEEecCc
Confidence 3588999999 8999999888777777 4788888764
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=87.31 E-value=1.5 Score=44.53 Aligned_cols=35 Identities=17% Similarity=0.093 Sum_probs=27.2
Q ss_pred CEEEEECCcchhHHHH-HHHH-HHhCCCccEEEEEEcCCC
Q 008324 13 KTILVSGVTGFVAKVF-IEKI-LRVQPNVKKLYLFVRAAD 50 (570)
Q Consensus 13 k~VlITGaTGFlG~~L-vekL-l~~~~~V~~V~~lvR~~~ 50 (570)
.+|+|+|| |-+|... +.-+ ...|. .+|+++.+++.
T Consensus 174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga--~~Vi~~~~~~~ 210 (357)
T 2b5w_A 174 SSAFVLGN-GSLGLLTLAMLKVDDKGY--ENLYCLGRRDR 210 (357)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHCTTCC--CEEEEEECCCS
T ss_pred CEEEEECC-CHHHHHHHHHHHHHHcCC--cEEEEEeCCcc
Confidence 99999999 9999988 6655 44452 45899988765
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=87.10 E-value=0.62 Score=46.66 Aligned_cols=37 Identities=19% Similarity=0.219 Sum_probs=30.0
Q ss_pred CC-EEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCc
Q 008324 12 NK-TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (570)
Q Consensus 12 ~k-~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~ 51 (570)
|. +|+|+||+|-+|...+..+...| .+|++..+++..
T Consensus 149 g~~~VlV~Ga~G~vG~~~~q~a~~~G---a~vi~~~~~~~~ 186 (328)
T 1xa0_A 149 ERGPVLVTGATGGVGSLAVSMLAKRG---YTVEASTGKAAE 186 (328)
T ss_dssp GGCCEEESSTTSHHHHHHHHHHHHTT---CCEEEEESCTTC
T ss_pred CCceEEEecCCCHHHHHHHHHHHHCC---CEEEEEECCHHH
Confidence 44 89999999999999988777777 467888887544
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=87.07 E-value=1.4 Score=44.64 Aligned_cols=38 Identities=13% Similarity=-0.039 Sum_probs=30.8
Q ss_pred CC-CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCc
Q 008324 11 EN-KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (570)
Q Consensus 11 ~~-k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~ 51 (570)
.| .+|+|+||+|-+|...+.-+...| .+|++++++...
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~G---a~vi~~~~~~~~ 204 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLN---FNSISVIRDRPN 204 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHT---CEEEEEECCCTT
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCC---CEEEEEecCccc
Confidence 57 899999999999998888777677 567888876543
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=86.85 E-value=1 Score=45.70 Aligned_cols=37 Identities=11% Similarity=0.052 Sum_probs=28.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-.|.+|||+|| |-+|...+.-....|. .+|++..+++
T Consensus 178 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga--~~Vi~~~~~~ 214 (363)
T 3m6i_A 178 RLGDPVLICGA-GPIGLITMLCAKAAGA--CPLVITDIDE 214 (363)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHHTTC--CSEEEEESCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence 46899999998 9999998877766663 3477777654
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=86.82 E-value=0.94 Score=44.29 Aligned_cols=33 Identities=9% Similarity=0.135 Sum_probs=28.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF 45 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~l 45 (570)
.+|++++|.|++|.+|+.++..|++.+ .+|++.
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~g---AtVtv~ 180 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRN---YTVSVC 180 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTT---CEEEEE
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCC---CeEEEE
Confidence 789999999999999999999999988 455554
|
| >1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B* | Back alignment and structure |
|---|
Probab=86.79 E-value=0.92 Score=47.58 Aligned_cols=94 Identities=14% Similarity=0.150 Sum_probs=56.3
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHHh---hhhhHHHHHhhhcccccc
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEVL---AKDVFNVLKEKWGTRLNS 81 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l~---~~~~f~~l~~~~~~~~~~ 81 (570)
.+++++|+|.|+ |-+|..+++.|.+.| |+++.++....-..+-..|-. +++= ....-+++++.+|.
T Consensus 37 ~L~~~~VlvvG~-GGlGs~va~~La~aG--vg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~---- 109 (434)
T 1tt5_B 37 LLDTCKVLVIGA-GGLGCELLKNLALSG--FRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPN---- 109 (434)
T ss_dssp HHHTCCEEEECS-STHHHHHHHHHHHTT--CCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTT----
T ss_pred HhcCCEEEEECc-CHHHHHHHHHHHHcC--CCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCC----
Confidence 347899999997 559999999999987 678888755431111111100 0000 00112344444442
Q ss_pred ccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcC
Q 008324 82 FISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSA 121 (570)
Q Consensus 82 ~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~A 121 (570)
-+++.+..++.+ .+ ..+++++|+||.+.
T Consensus 110 ---v~v~~~~~~i~~-------~~--~~~~~~~DlVi~~~ 137 (434)
T 1tt5_B 110 ---CNVVPHFNKIQD-------FN--DTFYRQFHIIVCGL 137 (434)
T ss_dssp ---CCCEEEESCGGG-------BC--HHHHTTCSEEEECC
T ss_pred ---CEEEEEecccch-------hh--HHHhcCCCEEEECC
Confidence 467777777762 22 25678999999874
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=86.30 E-value=1 Score=46.81 Aligned_cols=37 Identities=24% Similarity=0.372 Sum_probs=31.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
..|++|+|.|+ |-+|+.++..|...|. .+|++..|+.
T Consensus 165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~--~~V~v~~r~~ 201 (404)
T 1gpj_A 165 LHDKTVLVVGA-GEMGKTVAKSLVDRGV--RAVLVANRTY 201 (404)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCC--SEEEEECSSH
T ss_pred ccCCEEEEECh-HHHHHHHHHHHHHCCC--CEEEEEeCCH
Confidence 57999999997 9999999999998873 4788888864
|
| >1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* | Back alignment and structure |
|---|
Probab=86.11 E-value=7.2 Score=38.53 Aligned_cols=107 Identities=13% Similarity=0.074 Sum_probs=63.0
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.++|.|.|| |.+|..++..|++.+. +..|.++.|++..... ..+ ++ . ...+ + .....+..
T Consensus 7 ~mkI~IiGa-G~vG~~~a~~l~~~g~-~~~V~l~d~~~~~~~~-~~~--~~-~--------~~~~--~----~~~~~v~~ 66 (319)
T 1lld_A 7 PTKLAVIGA-GAVGSTLAFAAAQRGI-AREIVLEDIAKERVEA-EVL--DM-Q--------HGSS--F----YPTVSIDG 66 (319)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSHHHHHH-HHH--HH-H--------HTGG--G----STTCEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChhHHHH-HHH--HH-H--------hhhh--h----cCCeEEEe
Confidence 368999997 9999999999998873 2378888886421110 000 00 0 0000 0 01111111
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
. + +. ..++++|+||-+++...- .......+..|....+.+++...+.
T Consensus 67 ~--~-------~~----~~~~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~ 114 (319)
T 1lld_A 67 S--D-------DP----EICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV 114 (319)
T ss_dssp E--S-------CG----GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C--C-------CH----HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 0 11 234689999999875432 2334456788888888888877765
|
| >2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1 | Back alignment and structure |
|---|
Probab=86.02 E-value=2.5 Score=47.96 Aligned_cols=92 Identities=13% Similarity=0.146 Sum_probs=57.5
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHHh---hhhhHHHHHhhhcccccccc
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEVL---AKDVFNVLKEKWGTRLNSFI 83 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l~---~~~~f~~l~~~~~~~~~~~~ 83 (570)
++.+|+|.|+.| +|..+++.|.+.| |+++.++....-..+-..|-. +++- ....-++|++.+|.
T Consensus 410 ~~~~vlvvG~Gg-lG~~~~~~L~~~G--vg~i~l~D~d~v~~snl~rq~~~~~~~vg~~Ka~~~~~~l~~~np~------ 480 (805)
T 2nvu_B 410 DTCKVLVIGAGG-LGCELLKNLALSG--FRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPN------ 480 (805)
T ss_dssp HTCCEEEECCSS-HHHHHHHHHHTTT--CCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTT------
T ss_pred hCCeEEEECCCH-HHHHHHHHHHHcC--CCcEEEECCCeecccccccccccchhhcCChHHHHHHHHHHHHCCC------
Confidence 789999999755 8999999999876 688888877543222222200 0000 00112445554442
Q ss_pred CCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcC
Q 008324 84 SEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSA 121 (570)
Q Consensus 84 ~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~A 121 (570)
-+|+.+..++++ .+ ..+++++|+||.|.
T Consensus 481 -~~v~~~~~~~~~-------~~--~~~~~~~d~vv~~~ 508 (805)
T 2nvu_B 481 -CNVVPHFNKIQD-------FN--DTFYRQFHIIVCGL 508 (805)
T ss_dssp -CEEEEEESCGGG-------SC--HHHHHTCSEEEECC
T ss_pred -CEEEEEeccccc-------cH--HHHHhcCCEEEECC
Confidence 467777788773 22 25667899999874
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=85.95 E-value=1.2 Score=45.10 Aligned_cols=36 Identities=8% Similarity=0.037 Sum_probs=29.7
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~ 50 (570)
.|.+|+|+|+ |-+|...+.-+...| .+|++..+++.
T Consensus 180 ~g~~VlV~Ga-G~vG~~a~qlak~~G---a~Vi~~~~~~~ 215 (357)
T 2cf5_A 180 PGLRGGILGL-GGVGHMGVKIAKAMG---HHVTVISSSNK 215 (357)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHT---CEEEEEESSTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCC---CeEEEEeCChH
Confidence 6899999996 889999988777777 47888888754
|
| >4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A* | Back alignment and structure |
|---|
Probab=85.90 E-value=0.63 Score=47.59 Aligned_cols=41 Identities=20% Similarity=0.321 Sum_probs=28.8
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCccc
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS 53 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~ 53 (570)
..+|.|.||||++|..|++.|.+ .|.+.-+.+..|+..++.
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~-hP~~el~~l~S~~saGk~ 47 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSN-HPYIKPAYLAGKGSVGKP 47 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTT-CSSEEEEEEEESTTTTSB
T ss_pred CCeEEEECCCCHHHHHHHHHHHh-CCCceEEEEECchhcCCC
Confidence 35899999999999999996655 576644444444444443
|
| >4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A* | Back alignment and structure |
|---|
Probab=85.90 E-value=0.63 Score=47.59 Aligned_cols=41 Identities=20% Similarity=0.321 Sum_probs=28.8
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCccc
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS 53 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~ 53 (570)
..+|.|.||||++|..|++.|.+ .|.+.-+.+..|+..++.
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~-hP~~el~~l~S~~saGk~ 47 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSN-HPYIKPAYLAGKGSVGKP 47 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTT-CSSEEEEEEEESTTTTSB
T ss_pred CCeEEEECCCCHHHHHHHHHHHh-CCCceEEEEECchhcCCC
Confidence 35899999999999999996655 576644444444444443
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=85.75 E-value=1.3 Score=45.36 Aligned_cols=37 Identities=16% Similarity=0.193 Sum_probs=28.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-.|.+|+|+|| |-+|...+.-+...|. .+|++..+++
T Consensus 181 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga--~~Vi~~~~~~ 217 (370)
T 4ej6_A 181 KAGSTVAILGG-GVIGLLTVQLARLAGA--TTVILSTRQA 217 (370)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence 45899999998 8999998877776663 3677776654
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=85.71 E-value=0.9 Score=45.82 Aligned_cols=37 Identities=19% Similarity=0.325 Sum_probs=30.1
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHh--CCCccEEEEEEcCC
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRV--QPNVKKLYLFVRAA 49 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~--~~~V~~V~~lvR~~ 49 (570)
.. .|.+|+|+|| |-+|...+.-+... | .+|++..+++
T Consensus 168 ~~-~g~~VlV~Ga-G~vG~~aiqlak~~~~G---a~Vi~~~~~~ 206 (344)
T 2h6e_A 168 KF-AEPVVIVNGI-GGLAVYTIQILKALMKN---ITIVGISRSK 206 (344)
T ss_dssp TC-SSCEEEEECC-SHHHHHHHHHHHHHCTT---CEEEEECSCH
T ss_pred CC-CCCEEEEECC-CHHHHHHHHHHHHhcCC---CEEEEEeCCH
Confidence 44 7999999999 99999988877777 6 4688887754
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=85.68 E-value=1.5 Score=44.24 Aligned_cols=36 Identities=19% Similarity=0.120 Sum_probs=28.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-.|.+|+|+|+ |-+|...+.-+...| .+|++..+++
T Consensus 167 ~~g~~VlV~Ga-G~vG~~a~qla~~~G---a~Vi~~~~~~ 202 (352)
T 1e3j_A 167 QLGTTVLVIGA-GPIGLVSVLAAKAYG---AFVVCTARSP 202 (352)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcC---CEEEEEcCCH
Confidence 46899999997 889998888776666 4577777754
|
| >3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=85.62 E-value=2.3 Score=49.32 Aligned_cols=40 Identities=13% Similarity=0.226 Sum_probs=33.3
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
++-+++.+|+|.|+ |-+|..+++.|.+.| |+++.++....
T Consensus 22 q~rL~~s~VlIvG~-GGlGseiak~La~aG--Vg~itlvD~D~ 61 (1015)
T 3cmm_A 22 MLKMQTSNVLILGL-KGLGVEIAKNVVLAG--VKSMTVFDPEP 61 (1015)
T ss_dssp HHHHTTCEEEEECC-SHHHHHHHHHHHHHC--CSEEEEECCSB
T ss_pred HHHHhcCEEEEECC-ChHHHHHHHHHHHcC--CCeEEEecCCE
Confidence 56678999999997 559999999999987 68888876553
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=85.50 E-value=0.46 Score=42.37 Aligned_cols=72 Identities=10% Similarity=0.147 Sum_probs=42.9
Q ss_pred cchhHHHHHHHHHHhCCCccEEEEEEcCCCccc----HHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEeccCCC
Q 008324 21 TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS----AALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISS 96 (570)
Q Consensus 21 TGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~----~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl~~ 96 (570)
+|.++...++.|.+.| .+|.+..|+..... ..+.++ + ...+...+.+|+++
T Consensus 25 s~~p~~a~a~~La~~G---a~vvi~~r~~~e~~~~~~~~~~~~--------------~--------~G~~~~~i~~Dv~~ 79 (157)
T 3gxh_A 25 SGLPNEQQFSLLKQAG---VDVVINLMPDSSKDAHPDEGKLVT--------------Q--------AGMDYVYIPVDWQN 79 (157)
T ss_dssp EBCCCHHHHHHHHHTT---CCEEEECSCTTSTTSCTTHHHHHH--------------H--------TTCEEEECCCCTTS
T ss_pred cCCCCHHHHHHHHHcC---CCEEEECCCcccccccccHHHHHH--------------H--------cCCeEEEecCCCCC
Confidence 4678899999999988 45555566543321 111111 0 02456678889986
Q ss_pred CCCCCCchhhHHHH-------hCCccEEEEcCcc
Q 008324 97 EDLGLKDSNLKEEL-------WNELDIMVNSAAI 123 (570)
Q Consensus 97 ~~lgls~~~~~~~l-------~~~vdiViH~AA~ 123 (570)
+. .++ .+.+ ..+ |+++||||.
T Consensus 80 ~~----~~~-v~~~~~~i~~~~G~-dVLVnnAgg 107 (157)
T 3gxh_A 80 PK----VED-VEAFFAAMDQHKGK-DVLVHCLAN 107 (157)
T ss_dssp CC----HHH-HHHHHHHHHHTTTS-CEEEECSBS
T ss_pred CC----HHH-HHHHHHHHHhcCCC-CEEEECCCC
Confidence 51 122 2222 234 999999986
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=85.39 E-value=0.98 Score=45.64 Aligned_cols=39 Identities=13% Similarity=0.254 Sum_probs=31.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcc
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~ 52 (570)
-.|.+|+|+|| |-+|...+..+...| .+|++..+++...
T Consensus 175 ~~g~~VlV~Ga-G~vG~~a~qla~~~G---a~Vi~~~~~~~~~ 213 (348)
T 3two_A 175 TKGTKVGVAGF-GGLGSMAVKYAVAMG---AEVSVFARNEHKK 213 (348)
T ss_dssp CTTCEEEEESC-SHHHHHHHHHHHHTT---CEEEEECSSSTTH
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCC---CeEEEEeCCHHHH
Confidence 35899999997 999999888777767 4788888876543
|
| >2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A | Back alignment and structure |
|---|
Probab=84.90 E-value=10 Score=37.55 Aligned_cols=102 Identities=12% Similarity=0.004 Sum_probs=63.1
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.++|.|+|| |.+|..++..|+..+. +..|.+..+++. . ..... ++.. . ..+++.. .
T Consensus 14 ~~kV~ViGa-G~vG~~~a~~l~~~g~-~~ev~L~Di~~~-~--~g~a~-dl~~----------~-------~~~~i~~-t 69 (303)
T 2i6t_A 14 VNKITVVGG-GELGIACTLAISAKGI-ADRLVLLDLSEG-T--KGATM-DLEI----------F-------NLPNVEI-S 69 (303)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECCC--------CHH-HHHH----------H-------TCTTEEE-E
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEcCCcc-h--HHHHH-HHhh----------h-------cCCCeEE-e
Confidence 378999996 9999999999998884 457888877653 1 11111 1110 0 0124443 2
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
+|. ..++++|+||-+|+.-.-.......+..|+.-.+.+.+.+.+.
T Consensus 70 ~d~--------------~~l~~aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~ 115 (303)
T 2i6t_A 70 KDL--------------SASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHY 115 (303)
T ss_dssp SCG--------------GGGTTCSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCH--------------HHHCCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 221 2357899999999774222233455788888888888888775
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=84.51 E-value=0.43 Score=48.21 Aligned_cols=36 Identities=11% Similarity=0.166 Sum_probs=29.4
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
.|.+|+|+|| |-+|..++..+...|. .+|++..|++
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga--~~Vi~~~~~~ 199 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRASGA--GPILVSDPNP 199 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHTTC--CSEEEECSCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence 7899999999 9999999887777663 3688888764
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=84.29 E-value=1.7 Score=43.61 Aligned_cols=36 Identities=11% Similarity=0.131 Sum_probs=29.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-.|.+|+|+|+ |-+|...+.-+...| .+|++..++.
T Consensus 165 ~~g~~VlV~Ga-G~vG~~a~qla~~~G---a~Vi~~~~~~ 200 (340)
T 3s2e_A 165 RPGQWVVISGI-GGLGHVAVQYARAMG---LRVAAVDIDD 200 (340)
T ss_dssp CTTSEEEEECC-STTHHHHHHHHHHTT---CEEEEEESCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCC---CeEEEEeCCH
Confidence 46889999997 779999888777777 4788887764
|
| >3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=83.99 E-value=4.4 Score=39.86 Aligned_cols=36 Identities=25% Similarity=0.361 Sum_probs=28.1
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
.+|.|.||+|-+|+.+++.+.+. +++.-|-++.|+.
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~-~~~eLvg~vd~~~ 57 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRR-KDVELCAVLVRKG 57 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTC-SSEEEEEEBCCTT
T ss_pred eEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCC
Confidence 48999999999999999988763 6665555556653
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=83.88 E-value=1.8 Score=44.70 Aligned_cols=37 Identities=11% Similarity=0.143 Sum_probs=28.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-.|.+|+|+|| |-+|...+.-+...|. .+|++..+++
T Consensus 212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga--~~Vi~~~~~~ 248 (404)
T 3ip1_A 212 RPGDNVVILGG-GPIGLAAVAILKHAGA--SKVILSEPSE 248 (404)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence 35789999998 9999988877766663 4777776654
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=83.65 E-value=0.91 Score=44.38 Aligned_cols=36 Identities=25% Similarity=0.336 Sum_probs=31.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
+++++|+|+|+ |-+|+.++..|++.| .+|++..|+.
T Consensus 117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~G---~~v~v~~R~~ 152 (272)
T 1p77_A 117 RPNQHVLILGA-GGATKGVLLPLLQAQ---QNIVLANRTF 152 (272)
T ss_dssp CTTCEEEEECC-SHHHHTTHHHHHHTT---CEEEEEESSH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCC---CEEEEEECCH
Confidence 46899999998 779999999999988 6888888875
|
| >1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* | Back alignment and structure |
|---|
Probab=83.43 E-value=2.4 Score=41.94 Aligned_cols=33 Identities=12% Similarity=0.183 Sum_probs=28.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF 45 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~l 45 (570)
++|++|+|.|+++.+|+.++..|++.+ .+|++.
T Consensus 163 l~gk~vvVIG~s~iVG~p~A~lL~~~g---AtVtv~ 195 (301)
T 1a4i_A 163 IAGRHAVVVGRSKIVGAPMHDLLLWNN---ATVTTC 195 (301)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTT---CEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCC---CeEEEE
Confidence 579999999999999999999999987 455544
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=83.35 E-value=1.8 Score=43.76 Aligned_cols=38 Identities=11% Similarity=0.093 Sum_probs=30.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~ 50 (570)
-.|.+|+|+||+|-+|...+.-+...| .++++.+++..
T Consensus 166 ~~g~~VlV~Ga~G~vG~~aiqlak~~G---a~vi~~~~~~~ 203 (357)
T 1zsy_A 166 QPGDSVIQNASNSGVGQAVIQIAAALG---LRTINVVRDRP 203 (357)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHT---CEEEEEECCCS
T ss_pred CCCCEEEEeCCcCHHHHHHHHHHHHcC---CEEEEEecCcc
Confidence 358899999999999998887776677 46777776643
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=83.32 E-value=1 Score=46.25 Aligned_cols=37 Identities=24% Similarity=0.261 Sum_probs=30.2
Q ss_pred cCCCEEEEEC-CcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSG-VTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITG-aTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-.|.+|+|.| |+|-+|...+.-+...| .+|++..+++
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~G---a~Vi~~~~~~ 206 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKDG---IKLVNIVRKQ 206 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHHT---CCEEEEESSH
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHCC---CEEEEEECCH
Confidence 4688999997 99999999988887777 4678887754
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=82.98 E-value=6.8 Score=38.89 Aligned_cols=107 Identities=16% Similarity=0.096 Sum_probs=61.6
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.++|.|.|| |.+|..++..|++.+. ..|.+..+++.... ....++... . .... ...++...
T Consensus 4 ~~kI~VIGa-G~~G~~ia~~la~~g~--~~V~l~D~~~~~~~---~~~~~l~~~-----~-~~~~------~~~~i~~t- 64 (317)
T 2ewd_A 4 RRKIAVIGS-GQIGGNIAYIVGKDNL--ADVVLFDIAEGIPQ---GKALDITHS-----M-VMFG------STSKVIGT- 64 (317)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC--CEEEEECSSSSHHH---HHHHHHHHH-----H-HHHT------CCCCEEEE-
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC--ceEEEEeCCchHHH---HHHHHHHhh-----h-hhcC------CCcEEEEC-
Confidence 468999997 9999999999999873 26788888653222 111011000 0 0000 01222221
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
.| . ..++++|+||-+++...- .....+.+..|....+.+++...+.
T Consensus 65 ~d------------~--~a~~~aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~ 111 (317)
T 2ewd_A 65 DD------------Y--ADISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKY 111 (317)
T ss_dssp SC------------G--GGGTTCSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred CC------------H--HHhCCCCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHH
Confidence 11 1 235789999999976432 1222233566777777887777665
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=82.87 E-value=0.68 Score=47.27 Aligned_cols=36 Identities=14% Similarity=0.144 Sum_probs=27.9
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHh-CCCccEEEEEEcCC
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~-~~~V~~V~~lvR~~ 49 (570)
.|.+|+|+||+|-+|...+.-+... + .+|++..+++
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g---~~Vi~~~~~~ 207 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTD---LTVIATASRP 207 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCC---SEEEEECSSH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcC---CEEEEEeCCH
Confidence 5789999999999998877655442 4 5788887754
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=82.63 E-value=1 Score=44.40 Aligned_cols=37 Identities=30% Similarity=0.411 Sum_probs=31.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
++|++|+|+|+ |-+|+.++..|++.|. .+|++..|+.
T Consensus 124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~--~~v~v~~R~~ 160 (281)
T 3o8q_A 124 LKGATILLIGA-GGAARGVLKPLLDQQP--ASITVTNRTF 160 (281)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTCC--SEEEEEESSH
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHhcCC--CeEEEEECCH
Confidence 47899999997 7799999999998773 5788888875
|
| >2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae} | Back alignment and structure |
|---|
Probab=82.61 E-value=1.2 Score=39.09 Aligned_cols=45 Identities=13% Similarity=0.152 Sum_probs=36.5
Q ss_pred CCcccHHhhcC-CCEEEEECCc---chhHHHHHHHHHHhCCCccEEEEEEcC
Q 008324 1 MELGSVVEFLE-NKTILVSGVT---GFVAKVFIEKILRVQPNVKKLYLFVRA 48 (570)
Q Consensus 1 ~~~~~i~~~~~-~k~VlITGaT---GFlG~~LvekLl~~~~~V~~V~~lvR~ 48 (570)
|+...+..++. .++|.|.|+| |-+|..+++.|++.|. +||...++
T Consensus 1 m~~~~l~~ll~~p~~IavIGas~~~g~~G~~~~~~L~~~G~---~v~~vnp~ 49 (145)
T 2duw_A 1 MKENDIAGILTSTRTIALVGASDKPDRPSYRVMKYLLDQGY---HVIPVSPK 49 (145)
T ss_dssp CCCCSHHHHHHHCCCEEEESCCSCTTSHHHHHHHHHHHHTC---CEEEECSS
T ss_pred CCHHHHHHHHhCCCEEEEECcCCCCCChHHHHHHHHHHCCC---EEEEeCCc
Confidence 55567888886 8999999998 8899999999999985 46665443
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=82.54 E-value=1.3 Score=46.74 Aligned_cols=33 Identities=18% Similarity=0.168 Sum_probs=28.6
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
++|.|.| +|++|..++..|.+.| .+|++..|++
T Consensus 3 mkI~VIG-~G~vG~~lA~~La~~G---~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVG-IGYVGLVSATCFAELG---ANVRCIDTDR 35 (450)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSCH
T ss_pred CEEEEEC-cCHHHHHHHHHHHhcC---CEEEEEECCH
Confidence 6899998 6999999999999998 5778887764
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=82.46 E-value=1.3 Score=46.86 Aligned_cols=72 Identities=19% Similarity=0.344 Sum_probs=49.6
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+.|+|+|.|+ |-+|..|++.|.+.+ +.|.++.+++. ..+++. ++ -.+..+
T Consensus 2 ~~M~iiI~G~-G~vG~~la~~L~~~~---~~v~vId~d~~---~~~~~~-------------~~----------~~~~~i 51 (461)
T 4g65_A 2 NAMKIIILGA-GQVGGTLAENLVGEN---NDITIVDKDGD---RLRELQ-------------DK----------YDLRVV 51 (461)
T ss_dssp CCEEEEEECC-SHHHHHHHHHTCSTT---EEEEEEESCHH---HHHHHH-------------HH----------SSCEEE
T ss_pred CcCEEEEECC-CHHHHHHHHHHHHCC---CCEEEEECCHH---HHHHHH-------------Hh----------cCcEEE
Confidence 4579999995 899999999999888 56677665432 122222 11 256789
Q ss_pred eccCCCCCCCCCchhhHHHH-hCCccEEEE
Q 008324 91 PGDISSEDLGLKDSNLKEEL-WNELDIMVN 119 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l-~~~vdiViH 119 (570)
.||-+ +.+.++++ ++++|+++-
T Consensus 52 ~Gd~~-------~~~~L~~Agi~~ad~~ia 74 (461)
T 4g65_A 52 NGHAS-------HPDVLHEAGAQDADMLVA 74 (461)
T ss_dssp ESCTT-------CHHHHHHHTTTTCSEEEE
T ss_pred EEcCC-------CHHHHHhcCCCcCCEEEE
Confidence 99999 55555443 578999884
|
| >1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=82.26 E-value=10 Score=37.37 Aligned_cols=106 Identities=10% Similarity=0.030 Sum_probs=60.3
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|.| +|.+|..++..|++.+. ...|.+..|++.. .+.+..++- + ... .....+.....
T Consensus 2 ~kI~VIG-aG~~G~~la~~L~~~g~-~~~V~l~d~~~~~---~~~~~~~l~-----~----~~~-----~~~~~~~~~~~ 62 (309)
T 1hyh_A 2 RKIGIIG-LGNVGAAVAHGLIAQGV-ADDYVFIDANEAK---VKADQIDFQ-----D----AMA-----NLEAHGNIVIN 62 (309)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTC-CSEEEEECSSHHH---HHHHHHHHH-----H----HGG-----GSSSCCEEEES
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCC-CCEEEEEcCCHHH---HHHHHHHHH-----h----hhh-----hcCCCeEEEeC
Confidence 5899999 79999999999999874 3578888886421 112211110 0 000 00112222222
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCC-----ccccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITK-----FDERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~-----f~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
| . +.++++|+||-++.... ....-......|+.-.+.+++...+.
T Consensus 63 d----------~----~~~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~ 112 (309)
T 1hyh_A 63 D----------W----AALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES 112 (309)
T ss_dssp C----------G----GGGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHT
T ss_pred C----------H----HHhCCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 1 23478999999887632 11111123567777778888777764
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=82.23 E-value=3.9 Score=41.96 Aligned_cols=37 Identities=22% Similarity=0.167 Sum_probs=30.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~ 50 (570)
..|++|+|+|+ |-+|...++.+...| .+|++..|+..
T Consensus 170 l~g~~V~ViGa-G~iG~~aa~~a~~~G---a~V~~~d~~~~ 206 (384)
T 1l7d_A 170 VPPARVLVFGV-GVAGLQAIATAKRLG---AVVMATDVRAA 206 (384)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSCST
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEeCCHH
Confidence 46899999995 999999999998877 45788877654
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=82.22 E-value=5.6 Score=39.76 Aligned_cols=107 Identities=16% Similarity=0.127 Sum_probs=61.7
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.++|.|+|| |.+|..++..|+..+. ..|.+..+++.... ....++... +.. .+ ...++...
T Consensus 4 ~~kI~VIGa-G~vG~~ia~~la~~g~--~~v~L~Di~~~~l~---~~~~~l~~~-----~~~-~~------~~~~i~~t- 64 (322)
T 1t2d_A 4 KAKIVLVGS-GMIGGVMATLIVQKNL--GDVVLFDIVKNMPH---GKALDTSHT-----NVM-AY------SNCKVSGS- 64 (322)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC--CEEEEECSSSSHHH---HHHHHHHTH-----HHH-HT------CCCCEEEE-
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC--CeEEEEeCCHHHHH---HHHHHHHhh-----hhh-cC------CCcEEEEC-
Confidence 368999998 9999999999988763 24777776653322 111111110 000 00 01222221
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-ccc-----HHHHHHHhHHHHHHHHHHHHHc
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DER-----YDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~-----~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
.| . +.++++|+||-+++...- ... -......|+.-.+.+.+...+.
T Consensus 65 ~d------------~--~al~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~ 116 (322)
T 1t2d_A 65 NT------------Y--DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKN 116 (322)
T ss_dssp CC------------G--GGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred CC------------H--HHhCCCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 1 335789999999976431 111 2234677888888888777765
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=81.88 E-value=3.4 Score=40.79 Aligned_cols=36 Identities=11% Similarity=0.207 Sum_probs=30.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
..|++|+|.|+ |-+|+.+++.|...| .+|++..|+.
T Consensus 155 l~g~~v~IiG~-G~iG~~~a~~l~~~G---~~V~~~d~~~ 190 (300)
T 2rir_A 155 IHGSQVAVLGL-GRTGMTIARTFAALG---ANVKVGARSS 190 (300)
T ss_dssp STTSEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred CCCCEEEEEcc-cHHHHHHHHHHHHCC---CEEEEEECCH
Confidence 56899999995 999999999999877 4778877754
|
| >2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A | Back alignment and structure |
|---|
Probab=81.80 E-value=2.4 Score=41.51 Aligned_cols=33 Identities=15% Similarity=0.124 Sum_probs=27.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHh--CCCccEEEEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRV--QPNVKKLYLF 45 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~--~~~V~~V~~l 45 (570)
++||+++|.|+++-+|+.++..|++. + .+|++.
T Consensus 156 l~gk~vvVvG~s~iVG~p~A~lL~~~g~~---atVtv~ 190 (281)
T 2c2x_A 156 IAGAHVVVIGRGVTVGRPLGLLLTRRSEN---ATVTLC 190 (281)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHTSTTTC---CEEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHhcCCCC---CEEEEE
Confidence 57999999999999999999999887 5 455544
|
| >2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=81.70 E-value=1.1 Score=45.37 Aligned_cols=33 Identities=21% Similarity=0.325 Sum_probs=26.7
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEE
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF 45 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~l 45 (570)
++|.|.||||.+|+.|++.|++++.++..++.+
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~ 33 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLY 33 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEe
Confidence 479999999999999999998766555566544
|
| >3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans} | Back alignment and structure |
|---|
Probab=81.45 E-value=1.5 Score=45.10 Aligned_cols=40 Identities=23% Similarity=0.257 Sum_probs=28.2
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEE--EcCCCcc
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF--VRAADID 52 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~l--vR~~~~~ 52 (570)
+..+|.|.||||++|..|++.|.+ .|.+ +|..+ .++..++
T Consensus 18 ~~~kVaIvGAtG~vG~ell~lL~~-hp~~-el~~l~aS~~saGk 59 (381)
T 3hsk_A 18 SVKKAGVLGATGSVGQRFILLLSK-HPEF-EIHALGASSRSAGK 59 (381)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTT-CSSE-EEEEEEECTTTTTS
T ss_pred CccEEEEECCCChHHHHHHHHHHc-CCCc-eEEEeeccccccCC
Confidence 345899999999999999997665 4665 55444 3434444
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=81.31 E-value=1 Score=47.16 Aligned_cols=33 Identities=15% Similarity=0.126 Sum_probs=27.8
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
|+|.|.| +|.+|..++..|.+.| .+|.+..|++
T Consensus 1 mkI~VIG-~G~vG~~~A~~la~~G---~~V~~~d~~~ 33 (436)
T 1mv8_A 1 MRISIFG-LGYVGAVCAGCLSARG---HEVIGVDVSS 33 (436)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTT---CEEEEECSCH
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCC---CEEEEEECCH
Confidence 4789998 7999999999999988 5677777754
|
| >3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} | Back alignment and structure |
|---|
Probab=81.30 E-value=4.1 Score=38.51 Aligned_cols=35 Identities=23% Similarity=0.359 Sum_probs=28.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~ 48 (570)
++|++|+|.|| |=+|...++.|++.|. +|.++.+.
T Consensus 29 L~gk~VLVVGg-G~va~~ka~~Ll~~GA---~VtVvap~ 63 (223)
T 3dfz_A 29 LKGRSVLVVGG-GTIATRRIKGFLQEGA---AITVVAPT 63 (223)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHGGGCC---CEEEECSS
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEECCC
Confidence 67999999995 8899999999999994 45655543
|
| >1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 | Back alignment and structure |
|---|
Probab=81.19 E-value=2 Score=42.21 Aligned_cols=33 Identities=12% Similarity=0.073 Sum_probs=28.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF 45 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~l 45 (570)
.+|++|+|.|+++-+|+.++..|++.+ .+|++.
T Consensus 157 l~gk~vvVIG~s~iVG~p~A~lL~~~g---AtVtv~ 189 (288)
T 1b0a_A 157 TFGLNAVVIGASNIVGRPMSMELLLAG---CTTTVT 189 (288)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTTT---CEEEEE
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHCC---CeEEEE
Confidence 579999999999999999999999887 455554
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* | Back alignment and structure |
|---|
Probab=81.15 E-value=3 Score=41.82 Aligned_cols=37 Identities=22% Similarity=0.158 Sum_probs=28.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-.|.+|+|+|+ |-+|...+.-+...+. .+|++..+++
T Consensus 170 ~~g~~vlv~Ga-G~vG~~a~qla~~~g~--~~Vi~~~~~~ 206 (345)
T 3jv7_A 170 GPGSTAVVIGV-GGLGHVGIQILRAVSA--ARVIAVDLDD 206 (345)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHCC--CEEEEEESCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEEcCCH
Confidence 45889999998 8899988876666632 6788887764
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=81.04 E-value=3.1 Score=42.48 Aligned_cols=37 Identities=11% Similarity=0.223 Sum_probs=29.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-.|.+|||+| +|-+|...+.-+...| ..+|+++.|++
T Consensus 194 ~~g~~VlV~G-aG~vG~~aiqlak~~G--a~~Vi~~~~~~ 230 (380)
T 1vj0_A 194 FAGKTVVIQG-AGPLGLFGVVIARSLG--AENVIVIAGSP 230 (380)
T ss_dssp CBTCEEEEEC-CSHHHHHHHHHHHHTT--BSEEEEEESCH
T ss_pred CCCCEEEEEC-cCHHHHHHHHHHHHcC--CceEEEEcCCH
Confidence 3578999999 8999999887776665 24788888765
|
| >1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=80.90 E-value=1.2 Score=45.37 Aligned_cols=34 Identities=24% Similarity=0.331 Sum_probs=27.7
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcC
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~ 48 (570)
++|.|.||||.+|+.+++.|+++ |++ +|..+.|+
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~-p~~-ev~~i~~s 42 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADH-PMF-ELTALAAS 42 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTC-SSE-EEEEEEEC
T ss_pred ceEEEECcCCHHHHHHHHHHhcC-CCC-EEEEEEcc
Confidence 58999999999999999988864 554 67777654
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=80.89 E-value=3.8 Score=40.29 Aligned_cols=36 Identities=19% Similarity=0.233 Sum_probs=30.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
..|++|+|.| .|-+|+.+++.|...| .+|++..|+.
T Consensus 153 l~g~~v~IiG-~G~iG~~~a~~l~~~G---~~V~~~dr~~ 188 (293)
T 3d4o_A 153 IHGANVAVLG-LGRVGMSVARKFAALG---AKVKVGARES 188 (293)
T ss_dssp STTCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred CCCCEEEEEe-eCHHHHHHHHHHHhCC---CEEEEEECCH
Confidence 5789999999 5999999999999877 4778877754
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=80.79 E-value=2.2 Score=42.74 Aligned_cols=36 Identities=14% Similarity=0.117 Sum_probs=31.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~ 48 (570)
+.|++|+|.|++.-+|+.++..|++.+ .+|++..|+
T Consensus 175 l~gk~vvVIG~G~iVG~~~A~~L~~~g---AtVtv~nR~ 210 (320)
T 1edz_A 175 LYGKKCIVINRSEIVGRPLAALLANDG---ATVYSVDVN 210 (320)
T ss_dssp TTTCEEEEECCCTTTHHHHHHHHHTTS---CEEEEECSS
T ss_pred CCCCEEEEECCCcchHHHHHHHHHHCC---CEEEEEeCc
Confidence 579999999998899999999999987 567877665
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=80.75 E-value=4.2 Score=41.67 Aligned_cols=36 Identities=19% Similarity=0.193 Sum_probs=30.5
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~ 50 (570)
.+++|+|.|+ |-+|...++.+...| .+|.+..|+..
T Consensus 183 ~~~kV~ViG~-G~iG~~aa~~a~~lG---a~V~v~D~~~~ 218 (381)
T 3p2y_A 183 KPASALVLGV-GVAGLQALATAKRLG---AKTTGYDVRPE 218 (381)
T ss_dssp CCCEEEEESC-SHHHHHHHHHHHHHT---CEEEEECSSGG
T ss_pred CCCEEEEECc-hHHHHHHHHHHHHCC---CEEEEEeCCHH
Confidence 6789999996 999999999999988 46788877653
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=80.58 E-value=2.1 Score=44.01 Aligned_cols=37 Identities=8% Similarity=0.055 Sum_probs=29.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-.|.+|+|+|+ |-+|...+.-+...|. .+|++..+++
T Consensus 184 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga--~~Vi~~~~~~ 220 (398)
T 2dph_A 184 KPGSHVYIAGA-GPVGRCAAAGARLLGA--ACVIVGDQNP 220 (398)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHTC--SEEEEEESCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEEcCCH
Confidence 35889999997 9999988877766662 4788888764
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=80.57 E-value=1.6 Score=44.22 Aligned_cols=36 Identities=8% Similarity=0.148 Sum_probs=29.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHh-CCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~-~~~V~~V~~lvR~~ 49 (570)
-.|.+|+|+|| |-+|...+.-+... | .+|++..+++
T Consensus 185 ~~g~~VlV~Ga-G~vG~~avqlak~~~G---a~Vi~~~~~~ 221 (359)
T 1h2b_A 185 YPGAYVAIVGV-GGLGHIAVQLLKVMTP---ATVIALDVKE 221 (359)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHCC---CEEEEEESSH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC---CeEEEEeCCH
Confidence 46889999999 88999988877766 6 4788888764
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=80.47 E-value=1.6 Score=43.66 Aligned_cols=37 Identities=19% Similarity=0.257 Sum_probs=30.5
Q ss_pred CC-EEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCc
Q 008324 12 NK-TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (570)
Q Consensus 12 ~k-~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~ 51 (570)
|. +|+|+||+|-+|...+..+...| .+|++..+++..
T Consensus 150 g~~~VlV~Ga~G~vG~~~~q~a~~~G---a~vi~~~~~~~~ 187 (330)
T 1tt7_A 150 EKGSVLVTGATGGVGGIAVSMLNKRG---YDVVASTGNREA 187 (330)
T ss_dssp GGCCEEEESTTSHHHHHHHHHHHHHT---CCEEEEESSSST
T ss_pred CCceEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH
Confidence 44 89999999999999998887777 457888887544
|
| >3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=80.38 E-value=5.5 Score=46.22 Aligned_cols=134 Identities=13% Similarity=0.121 Sum_probs=74.8
Q ss_pred HHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCc-----cEEEEEEcCCCcccHHHHHH----HHHh--h-hhhHHHHHh
Q 008324 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNV-----KKLYLFVRAADIDSAALRFQ----NEVL--A-KDVFNVLKE 73 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V-----~~V~~lvR~~~~~~~~~rl~----~~l~--~-~~~f~~l~~ 73 (570)
.++.+++.+|+|.|+ |-+|..+++.|.+.| | ++|.++....=..+-..|-. +++= + ...-+++++
T Consensus 419 ~q~kL~~~~VlvVGa-GGlGsevlk~La~~G--v~~g~~G~i~lvD~D~Ve~SNLnRQ~lf~~~dvG~~Ka~~aa~~l~~ 495 (1015)
T 3cmm_A 419 FQKKIANSKVFLVGS-GAIGCEMLKNWALLG--LGSGSDGYIVVTDNDSIEKSNLNRQFLFRPKDVGKNKSEVAAEAVCA 495 (1015)
T ss_dssp HHHHHHTCEEEEECC-SHHHHHHHHHHHHHT--TTCSTTCEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHH
T ss_pred HHHHHhcCeEEEEec-CHHHHHHHHHHHHcC--cCcCCCCeEEEEeCCEeccccccccccCChhhCCCHHHHHHHHHHHH
Confidence 356678899999997 669999999999987 5 67887765432222111100 0000 0 001134444
Q ss_pred hhccccccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccC
Q 008324 74 KWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVK 153 (570)
Q Consensus 74 ~~~~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~ 153 (570)
.+|. +..+|+.+...++..+..+ .-..+++++|+|+.+.-. .+ .-..+-+.|... +
T Consensus 496 iNP~-----v~~~v~~~~~~i~~~~~~~----~~~~~~~~~D~Vi~a~Dn------~~--------aR~~ln~~c~~~-~ 551 (1015)
T 3cmm_A 496 MNPD-----LKGKINAKIDKVGPETEEI----FNDSFWESLDFVTNALDN------VD--------ARTYVDRRCVFY-R 551 (1015)
T ss_dssp HCGG-----GTTTEEEECCCCSGGGTTT----SCHHHHHHCSEEEECCSS------HH--------HHHHHHHHHHHH-T
T ss_pred HCCC-----CcceEEEEecccCchhhhh----ccHhhhccCCEEEECCCC------HH--------HHHHHHHHHHHc-C
Confidence 4442 2237888888887432110 012456789999987533 11 122344456654 3
Q ss_pred ceEEEEEecceeec
Q 008324 154 LKVFVHVSTAYVAG 167 (570)
Q Consensus 154 l~~~V~vSTa~v~~ 167 (570)
+.+|+.++....|
T Consensus 552 -~Pli~~g~~G~~G 564 (1015)
T 3cmm_A 552 -KPLLESGTLGTKG 564 (1015)
T ss_dssp -CCEEEEEEETTEE
T ss_pred -CcEEEeCCCcccc
Confidence 4577777654433
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=80.36 E-value=4.4 Score=41.14 Aligned_cols=39 Identities=15% Similarity=-0.001 Sum_probs=30.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCc
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~ 51 (570)
-.|.+|||+|+ |-+|...+.-+...|. .+|++..+++..
T Consensus 189 ~~g~~VlV~Ga-G~vG~~avqla~~~Ga--~~Vi~~~~~~~~ 227 (373)
T 2fzw_A 189 EPGSVCAVFGL-GGVGLAVIMGCKVAGA--SRIIGVDINKDK 227 (373)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHTC--SEEEEECSCGGG
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC--CeEEEEcCCHHH
Confidence 35789999996 8999998887777773 378888776543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 570 | ||||
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 1e-08 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 2e-08 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 4e-07 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 6e-07 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 1e-05 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 3e-04 | |
| d1xq1a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara | 4e-04 | |
| d1hxha_ | 253 | c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge | 0.001 | |
| d2d1ya1 | 248 | c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T | 0.001 | |
| d2ae2a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 0.003 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 0.003 |
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 54.8 bits (131), Expect = 1e-08
Identities = 49/352 (13%), Positives = 91/352 (25%), Gaps = 82/352 (23%)
Query: 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLK 72
K L++GVTG E +L + V +++ FN +
Sbjct: 2 KVALITGVTGQDGSYLAEFLL-------EKGYEVHGIKRRASS------------FNTER 42
Query: 73 EKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDV 132
+ + K GD+S D L+E +E+ + + + E +
Sbjct: 43 VDHIYQDPHTCNPKFHLHYGDLS--DTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEY 100
Query: 133 AFGINTLGVIHLVNFAKK--CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEM 190
++ +G + L+ + K F ST+ + G
Sbjct: 101 TADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGL---------------------- 138
Query: 191 KVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE--N 248
+ PQKE T F + Y K + +E
Sbjct: 139 -----------VQEIPQKETTPFYPR------------SPYAVAKLYAYWITVNYRESYG 175
Query: 249 LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLV-GETKVIMDVIPVDM 307
+ P G + I AQG CL G + D
Sbjct: 176 MYACNGILFNHES----PRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKD 231
Query: 308 VVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWIN 359
V + + Q + + + ++ ++ K
Sbjct: 232 YVKMQWMML-----QQEQPEDFVIATG--VQYSVRQFVEMAAAQLGIKLRFE 276
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.9 bits (129), Expect = 2e-08
Identities = 50/316 (15%), Positives = 95/316 (30%), Gaps = 89/316 (28%)
Query: 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLK 72
K IL++G GFV +K++ V
Sbjct: 2 KRILITGGAGFVGSHLTDKLMMDGHEV--------------------------------- 28
Query: 73 EKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYD- 131
T +++F + + V I E+ L + ++ E L+ E+D + + A+
Sbjct: 29 ----TVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYN 84
Query: 132 --VAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAE 189
NT+G ++++ AK+ + ST+ V G+
Sbjct: 85 PIKTLKTNTIGTLNMLGLAKRVG--ARLLLASTSEVYGD--------------------- 121
Query: 190 MKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ--QSKE 247
+ PQ E N G Y K + E + +E
Sbjct: 122 ------------PEVHPQSEDYWGHVN-------PIGPRACYDEGKRVAETMCYAYMKQE 162
Query: 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307
+ + + R G G V ++ + + QG + G V
Sbjct: 163 GVEVRVARIFNTFGPRMHMNDGRV-----VSNFILQALQGEPLTVYGSGSQTRAFQYVSD 217
Query: 308 VVNAMIVAMVAHAKQP 323
+VN ++ M ++ P
Sbjct: 218 LVNGLVALMNSNVSSP 233
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.0 bits (118), Expect = 4e-07
Identities = 49/381 (12%), Positives = 97/381 (25%), Gaps = 74/381 (19%)
Query: 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLK 72
L++G+TG E +L + V S++
Sbjct: 2 NVALITGITGQDGSYLAEFLL-------EKGYEVHGIVRRSSSFNTGR-----------I 43
Query: 73 EKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDV 132
E + I + GD++ D + E E+ + + + + +
Sbjct: 44 EHLYKNPQAHIEGNMKLHYGDLT--DSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEY 101
Query: 133 AFGINTLGVIHLVNFAKKC--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEM 190
++ +G + L++ K C + F ST+ + G+
Sbjct: 102 TADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGK---------------------- 139
Query: 191 KVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ--QSKEN 248
+ PQKE T F + Y K ++ + N
Sbjct: 140 -----------VQEIPQKETTPFYPR------------SPYGAAKLYAYWIVVNFREAYN 176
Query: 249 LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308
L V + K ++ +G D
Sbjct: 177 LFAVNGILFNHESPRRGA---NFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDY 233
Query: 309 VNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWINKQGKPVKVS 368
V AM ++ +P D I S L G + N+ G+ +
Sbjct: 234 VEAMW--LMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETG 291
Query: 369 KIILFSSIASFHGYMQIRYLL 389
K+ + + +
Sbjct: 292 KVHVTVDLKYYRPTEVDFLQG 312
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 49.4 bits (117), Expect = 6e-07
Identities = 54/368 (14%), Positives = 105/368 (28%), Gaps = 91/368 (24%)
Query: 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEK 74
IL++G GF+ + I+ K V D + A ++ +
Sbjct: 3 ILITGGAGFIGSAVVRHII------KNTQDTVVNIDKLTYAGNLESLSDISE-------- 48
Query: 75 WGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNEL--DIMVNSAAITKFDERYD- 131
S + F DI DS ++ + D +++ AA + D
Sbjct: 49 ---------SNRYNFEHADIC-------DSAEITRIFEQYQPDAVMHLAAESHVDRSITG 92
Query: 132 --VAFGINTLGVIHLVNFAKKC--------VKLKVFVHVSTAYVAGERTGLILENPLDGA 181
N +G L+ A+K F H+ST V G+
Sbjct: 93 PAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLP----------- 141
Query: 182 SGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241
D + L T AP + Y +K + L
Sbjct: 142 ---HPDEVENSVTLPLFTETTAYAPS---------------------SPYSASKASSDHL 177
Query: 242 MQQSKE--NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVI 299
++ + L ++ + G P + K I + + + +G + G+ I
Sbjct: 178 VRAWRRTYGLPTIVTNCSNNYG------PYHFPE-KLIPLVILNALEGKPLPIYGKGDQI 230
Query: 300 MDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWIN 359
D + V+ A+ + + + Y++G V + +
Sbjct: 231 RDWLYVEDHARALHMVV----TEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATS 286
Query: 360 KQGKPVKV 367
+ + V
Sbjct: 287 YREQITYV 294
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 45.2 bits (106), Expect = 1e-05
Identities = 48/320 (15%), Positives = 84/320 (26%), Gaps = 81/320 (25%)
Query: 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEK 74
+LV+G GF+ F+ ++L +EV+ D
Sbjct: 3 LLVTGGAGFIGSHFVRQLLAGAYPDVPA-----------------DEVIVLDSLT-YAGN 44
Query: 75 WGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAF 134
++ FV GDI L ++ + + + +I +
Sbjct: 45 RANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTET-- 102
Query: 135 GINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVID 194
N G L+ A + VHVST V G
Sbjct: 103 --NVQGTQTLLQCAVDA-GVGRVVHVSTNQVYGS-------------------------- 133
Query: 195 QKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ--QSKENLSLV 252
E + N + Y +K +++ + L +
Sbjct: 134 -------IDSGSWTESSPLEPN------------SPYAASKAGSDLVARAYHRTYGLDVR 174
Query: 253 IIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312
I R G Y+ P K I G L G+ + + + D +
Sbjct: 175 ITRCCNNYGPYQHPE-------KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGI 227
Query: 313 IVAMVAHAKQPSDANIYHVG 332
+ + IYH+G
Sbjct: 228 ALVL----AGGRAGEIYHIG 243
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 40.7 bits (94), Expect = 3e-04
Identities = 53/359 (14%), Positives = 111/359 (30%), Gaps = 79/359 (22%)
Query: 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNV 70
+ K L++GV GF+ +E + L+ +V+ D F
Sbjct: 15 QPKVWLITGVAGFIGSNLLETL-----------------------LKLDQKVVGLDNFAT 51
Query: 71 LKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERY 130
++ + S +SEK I + L D N + + ++ +
Sbjct: 52 GHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDP 111
Query: 131 DVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEM 190
+ N G ++++ A+ K++ F + +++ G+ GL
Sbjct: 112 ITSNATNIDGFLNMLIAARDA-KVQSFTYAASSSTYGDHPGL------------------ 152
Query: 191 KVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ--QSKEN 248
P+ E T+ + Y TK + E+
Sbjct: 153 ---------------PKVEDTIGK------------PLSPYAVTKYVNELYADVFSRCYG 185
Query: 249 LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308
S + +R V G ++P + I + QG+ + G+ + D ++
Sbjct: 186 FSTIGLRYFNVFGRRQDPNGAYA---AVIPKWTSSMIQGDDVYINGDGETSRDFCYIENT 242
Query: 309 VNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWINKQGKPVKV 367
V A ++A A + VG ++ D + ++ +PV
Sbjct: 243 VQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDG-----LAENGVSYHREPVYR 296
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 40.0 bits (93), Expect = 4e-04
Identities = 28/156 (17%), Positives = 48/156 (30%), Gaps = 40/156 (25%)
Query: 10 LENKTILVSGVTG----FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAK 65
L+ KT+LV+G T + + F + + L NE L+K
Sbjct: 6 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIH-----------TCARNEYEL---NECLSK 51
Query: 66 DVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLK-DSNLKEELWNELDIMVNSAAIT 124
++K ++T D S K + +LDI++N+
Sbjct: 52 -----WQKKGF---------QVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAI 97
Query: 125 KF-------DERYDVAFGINTLGVIHLVNFAKKCVK 153
+ E + N HL A +K
Sbjct: 98 RSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLK 133
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 38.8 bits (90), Expect = 0.001
Identities = 35/171 (20%), Positives = 58/171 (33%), Gaps = 42/171 (24%)
Query: 10 LENKTILVSGVT---GF-VAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAK 65
L+ K LV+G G V K+ + + +V +DI+ AA + LA
Sbjct: 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVA-----------FSDINEAAG----QQLAA 48
Query: 66 DVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK 125
+ + E+ FV D+SSE + L+++VN+A I
Sbjct: 49 E----------------LGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILL 92
Query: 126 F-------DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169
E + INT V +K ++ A V+
Sbjct: 93 PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWL 143
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Score = 38.3 bits (89), Expect = 0.001
Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 8/92 (8%)
Query: 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINT 138
F D+ E ++ +D++VN+AAI + +N
Sbjct: 49 GGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNL 108
Query: 139 LGVIHLVN-FAKKCVKLKVFVHVSTAYVAGER 169
+HL A++ K+ V+ A V G
Sbjct: 109 TAPMHLSALAAREMRKVGGGAIVNVASVQGLF 140
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Score = 37.3 bits (86), Expect = 0.003
Identities = 28/157 (17%), Positives = 47/157 (29%), Gaps = 42/157 (26%)
Query: 10 LENKTILVSGVTG----FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAK 65
LE T LV+G + + + V + L
Sbjct: 6 LEGCTALVTGGSRGIGYGIVEELASLGASVY-----------TCSRNQKEL--------N 46
Query: 66 DVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKD--SNLKEELWNELDIMVNSAAI 123
D + K K+ D+SS ++ + + +L+I+VN+A I
Sbjct: 47 DCLTQWRSKGF---------KVEASVCDLSSRS-ERQELMNTVANHFHGKLNILVNNAGI 96
Query: 124 TKF-------DERYDVAFGINTLGVIHLVNFAKKCVK 153
+ E Y + IN HL A +K
Sbjct: 97 VIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLK 133
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 37.6 bits (86), Expect = 0.003
Identities = 28/159 (17%), Positives = 58/159 (36%), Gaps = 36/159 (22%)
Query: 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEK 74
+LV+G +G++ ++ L+ ++V+ D K
Sbjct: 3 VLVTGGSGYIGSHTCVQL-----------------------LQNGHDVIILDNLCNSKRS 39
Query: 75 WGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNEL--DIMVNSAAITKFDERYD- 131
+ + TFV GDI + L E+ ++ D +++ A + E
Sbjct: 40 VLPVIERLGGKHPTFVEGDIR-------NEALMTEILHDHAIDTVIHFAGLKAVGESVQK 92
Query: 132 --VAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168
+ N G + L++ + +K F+ S+A V G+
Sbjct: 93 PLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATVYGD 130
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 570 | |||
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.98 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.97 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.97 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.97 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.97 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.97 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.97 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.97 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.97 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.97 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.96 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.96 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.96 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.96 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.96 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.96 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.94 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.94 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.94 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.93 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.93 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.9 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.88 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.87 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.87 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.86 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.85 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.85 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.85 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.79 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.63 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.62 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.62 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.61 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.61 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.6 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.6 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.6 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.59 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.59 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.58 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.58 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.57 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.57 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.57 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.57 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.57 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.56 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.56 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.55 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.55 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.54 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.54 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.53 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.53 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.53 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.53 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.52 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.52 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.51 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.51 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.51 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.5 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.5 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.5 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.49 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.49 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.48 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.48 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.46 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.46 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.46 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.45 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.45 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.43 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.42 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.41 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.41 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.39 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.38 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.38 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.37 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.36 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.35 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.34 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.33 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.29 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.29 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.23 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.12 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.07 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 99.02 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 98.95 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 98.95 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 98.86 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 98.72 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.61 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.34 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.16 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 97.11 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 96.93 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 96.77 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 96.71 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 96.7 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 96.69 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 96.5 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 96.49 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 96.42 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 96.32 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 96.3 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 96.27 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 96.17 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 96.11 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 96.11 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 96.06 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 96.04 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 95.82 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 95.69 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 95.61 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 95.41 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 95.36 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 95.35 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 95.32 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 95.15 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 95.12 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 95.11 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 94.87 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 94.85 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 94.82 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 94.74 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 94.24 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 94.14 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 94.06 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 93.98 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 93.97 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 93.84 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 93.74 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 93.62 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 93.57 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 92.9 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 92.01 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 91.94 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 91.58 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 91.51 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 90.59 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 90.41 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 90.41 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 90.17 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 90.04 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 90.04 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 89.83 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 89.75 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 89.36 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 89.27 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 88.93 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 88.49 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 87.82 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 87.41 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 87.24 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 87.03 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 86.96 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 86.93 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 86.5 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 86.44 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 86.27 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 86.19 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 85.78 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 85.76 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 85.7 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 85.36 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 84.92 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 84.2 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 84.1 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 84.02 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 83.35 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 83.24 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 82.92 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 82.73 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 82.62 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 82.59 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 82.03 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 82.02 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 81.96 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 81.74 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 81.32 | |
| d1vdca2 | 130 | Thioredoxin reductase {Mouse-ear cress (Arabidopsi | 80.8 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 80.55 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 80.17 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 80.12 |
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.98 E-value=1.1e-31 Score=278.20 Aligned_cols=261 Identities=15% Similarity=0.102 Sum_probs=188.0
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|.|||||||||||++|+++|++.| ++|++++|...... .+++. .+.. +. ....+++.++.|
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g---~~V~~~~r~~~~~~-~~~~~-~~~~---------~~-----~~~~~~~~~~~~ 62 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKG---YEVHGIKRRASSFN-TERVD-HIYQ---------DP-----HTCNPKFHLHYG 62 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEECC-------------------------------------CCEEECCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCc---CEEEEEECCCcccc-hhhHH-HHHh---------hh-----hhcCCCeEEEEe
Confidence 789999999999999999999998 67889998543211 11111 1100 00 112368999999
Q ss_pred cCCCCCCCCCchhhHHHHhCC--ccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHHc--cCceEEEEEeccee
Q 008324 93 DISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFVHVSTAYV 165 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~--vdiViH~AA~v~f---~~~~~~~~~~Nv~gt~~ll~la~~~--~~l~~~V~vSTa~v 165 (570)
|++ +.+..+.++++ +|+|||+||..+. .++....+++|+.||.+|+++|++. ++.++|||+||+.+
T Consensus 63 Dl~-------d~~~~~~~~~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~v 135 (357)
T d1db3a_ 63 DLS-------DTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSEL 135 (357)
T ss_dssp CSS-------CHHHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGG
T ss_pred ecC-------CHHHHHHHHhccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhh
Confidence 999 55555677764 5999999998643 2456677899999999999999986 34558999999999
Q ss_pred ecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008324 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (570)
Q Consensus 166 ~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (570)
||.... .+++|+++. .+.|.|+.||..+|.+++.+
T Consensus 136 YG~~~~----~~~~E~~~~-----------------------------------------~P~~~Y~~sK~~~E~~~~~~ 170 (357)
T d1db3a_ 136 YGLVQE----IPQKETTPF-----------------------------------------YPRSPYAVAKLYAYWITVNY 170 (357)
T ss_dssp GTTCCS----SSBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHH
T ss_pred hCCCCC----CCcCCCCCC-----------------------------------------CCCChHHHHHHHHHHHHHHH
Confidence 986431 223322322 33578999999999999987
Q ss_pred --ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCc-eeeecCCCeeeeeeehHHHHHHHHHHHHHhhCC
Q 008324 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNL-RCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQ 322 (570)
Q Consensus 246 --~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~-~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~ 322 (570)
..+++++++||+.||||...+. .........+.....|.. ....++++..+|+++|+|+|++++.++.. .
T Consensus 171 ~~~~~l~~~ilR~~~vyGp~~~~~----~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~~~--~- 243 (357)
T d1db3a_ 171 RESYGMYACNGILFNHESPRRGET----FVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQ--E- 243 (357)
T ss_dssp HHHHCCCEEEEEECCEECTTSCTT----SHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSS--S-
T ss_pred HHHhCCCEEEEEeccccCCCCCcC----CCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHHhC--C-
Confidence 3489999999999999865321 111223344555555544 44568999999999999999999988742 1
Q ss_pred CCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 323 PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 323 ~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
.+++||++++ .++|+.++++.+.+.++..
T Consensus 244 --~~~~yni~sg--~~~s~~~~~~~~~~~~g~~ 272 (357)
T d1db3a_ 244 --QPEDFVIATG--VQYSVRQFVEMAAAQLGIK 272 (357)
T ss_dssp --SCCCEEECCC--CCEEHHHHHHHHHHTTTEE
T ss_pred --CCCeEEECCC--CceehHHHHHHHHHHhCCc
Confidence 2578999999 8999999999999998754
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.8e-31 Score=271.40 Aligned_cols=252 Identities=16% Similarity=0.170 Sum_probs=190.5
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|++.| .+|+++.|...+... .+. . .....++....+
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g---~~V~~~d~~~~~~~~--~~~--------------~------~~~~~~~d~~~~ 56 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDG---HEVTVVDNFFTGRKR--NVE--------------H------WIGHENFELINH 56 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCGG--GTG--------------G------GTTCTTEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCc---CEEEEEeCCCcCCHH--HHH--------------H------hcCCCceEEEeh
Confidence 789999999999999999999998 567777763322110 000 0 001245667777
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCC
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f---~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~ 169 (570)
|+.+ .+..++|+|||+||.+.. ..+....+++|+.||.+|+++|++. ++ ++||+||..+||..
T Consensus 57 ~~~~------------~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~-~~-k~I~~SS~~vy~~~ 122 (312)
T d2b69a1 57 DVVE------------PLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLASTSEVYGDP 122 (312)
T ss_dssp CTTS------------CCCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEEGGGGBSC
T ss_pred HHHH------------HHHcCCCEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEEChheecCC
Confidence 7652 233579999999997653 3456677899999999999999996 54 79999999999864
Q ss_pred C-cccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--c
Q 008324 170 T-GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--K 246 (570)
Q Consensus 170 ~-g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~ 246 (570)
. +.++|..+.+.++. .+.+.|+.||.++|.++..+ .
T Consensus 123 ~~~~~~e~~~~~~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~~~~~ 161 (312)
T d2b69a1 123 EVHPQSEDYWGHVNPI-----------------------------------------GPRACYDEGKRVAETMCYAYMKQ 161 (312)
T ss_dssp SSSSBCTTCCCBCCSS-----------------------------------------STTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCccccCCCCCC-----------------------------------------CCccHHHHHHHHHHHHHHHHHHH
Confidence 3 24555544332222 23478999999999999887 4
Q ss_pred cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCC
Q 008324 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~ 326 (570)
.+++++++||+.||||...+- .......++..+..|....+++++.+.+|++||+|+|++++.++.. . ..
T Consensus 162 ~~~~~~~lR~~~vyGp~~~~~-----~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~--~---~~ 231 (312)
T d2b69a1 162 EGVEVRVARIFNTFGPRMHMN-----DGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS--N---VS 231 (312)
T ss_dssp HCCCEEEEEECCEECTTCCTT-----CCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTS--S---CC
T ss_pred hCCcEEEEEeeeEECCCCCCC-----CccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhh--c---cC
Confidence 589999999999999865431 1123456677778888888889999999999999999999888741 1 25
Q ss_pred ceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 327 NIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 327 ~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
.+||++++ .++++.++++.+.+.++..+
T Consensus 232 ~~~n~~~~--~~~~~~~~~~~i~~~~~~~~ 259 (312)
T d2b69a1 232 SPVNLGNP--EEHTILEFAQLIKNLVGSGS 259 (312)
T ss_dssp SCEEESCC--CEEEHHHHHHHHHHHHTCCC
T ss_pred CceEecCC--cccchhhHHHHHHHHhCCCC
Confidence 68999999 99999999999999998764
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.97 E-value=2e-30 Score=264.55 Aligned_cols=256 Identities=21% Similarity=0.245 Sum_probs=196.6
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCcc---EEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVK---KLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~---~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
|+|||||||||||++|+++|++.|.+|. +|+.+.+........ .+. . .....++.+
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~-~~~-------------~-------~~~~~~~~~ 59 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRA-NLA-------------P-------VDADPRLRF 59 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGG-GGG-------------G-------GTTCTTEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHh-Hhh-------------h-------hhcCCCeEE
Confidence 6899999999999999999999987654 455554332211100 000 0 001367999
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceee
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f---~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~ 166 (570)
+.+|+. +..........+|+|+|+|+.... ..+....+++|+.||.+++++|++. ++++|||+||+.++
T Consensus 60 ~~~d~~-------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~I~~Ss~~~y 131 (322)
T d1r6da_ 60 VHGDIR-------DAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVSTNQVY 131 (322)
T ss_dssp EECCTT-------CHHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGG
T ss_pred EEeccc-------cchhhhccccccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHc-CCceEEEeecceee
Confidence 999999 455555677889999999987643 2445667899999999999999997 78999999999999
Q ss_pred cCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-
Q 008324 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (570)
Q Consensus 167 ~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~- 245 (570)
|... +.+++|+.+. .+.+.|+.||..+|.+++.+
T Consensus 132 g~~~----~~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~~~ 166 (322)
T d1r6da_ 132 GSID----SGSWTESSPL-----------------------------------------EPNSPYAASKAGSDLVARAYH 166 (322)
T ss_dssp CCCS----SSCBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHH
T ss_pred cCCC----CCCCCCCCCC-----------------------------------------CCCCHHHHHHHHHHHHHHHHH
Confidence 8643 2223222222 34578999999999999887
Q ss_pred -ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCC
Q 008324 246 -KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (570)
Q Consensus 246 -~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 324 (570)
..+++++++||+.|||+...+ + ..+..++..+..|....+++++++.+|++||+|+|++++.++....
T Consensus 167 ~~~~~~~~~lR~~~vyGp~~~~-----~--~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~---- 235 (322)
T d1r6da_ 167 RTYGLDVRITRCCNNYGPYQHP-----E--KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR---- 235 (322)
T ss_dssp HHHCCCEEEEEECEEECTTCCT-----T--SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC----
T ss_pred HHhCCCEEEEEeeeEECcCCCc-----C--cHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCC----
Confidence 458999999999999986532 1 2345667778888877888999999999999999999999986422
Q ss_pred CCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 325 ~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
.+++||++++ +++++.++++.+.+.++..
T Consensus 236 ~~~~~ni~~~--~~~s~~e~~~~i~~~~~~~ 264 (322)
T d1r6da_ 236 AGEIYHIGGG--LELTNRELTGILLDSLGAD 264 (322)
T ss_dssp TTCEEEECCC--CEEEHHHHHHHHHHHHTCC
T ss_pred CCCeeEEeec--ccchhHHHHHHHHHHhCCC
Confidence 2679999999 9999999999999998865
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.97 E-value=4.1e-31 Score=274.35 Aligned_cols=263 Identities=19% Similarity=0.224 Sum_probs=191.1
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|++.++++ |.++.+...... .+++. . ....+++.++.+
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~v--v~~~d~~~~~~~-~~~~~-~-------------------~~~~~~~~~~~~ 57 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDT--VVNIDKLTYAGN-LESLS-D-------------------ISESNRYNFEHA 57 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCE--EEEEECCCTTCC-GGGGT-T-------------------TTTCTTEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCE--EEEEeCCCcccc-HHHHH-h-------------------hhhcCCcEEEEc
Confidence 689999999999999999999998532 444433222111 11111 0 001368999999
Q ss_pred cCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHcc--------CceEEEE
Q 008324 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCV--------KLKVFVH 159 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~--------~l~~~V~ 159 (570)
|++ +.+..+.+++ ++|+|||+||..... +.....+++|+.||.+++++|+++. +.++|||
T Consensus 58 Dl~-------d~~~l~~~~~~~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~ 130 (361)
T d1kewa_ 58 DIC-------DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHH 130 (361)
T ss_dssp CTT-------CHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEE
T ss_pred cCC-------CHHHHHHHHHhCCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEE
Confidence 999 4444455555 589999999986532 3445678999999999999998862 4569999
Q ss_pred EecceeecCCCcccc-cccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHH
Q 008324 160 VSTAYVAGERTGLIL-ENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (570)
Q Consensus 160 vSTa~v~~~~~g~i~-E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~a 238 (570)
+||..+||....... |.... .+...+ .....+.+.|+.||.++
T Consensus 131 ~SS~~vyg~~~~~~~~~~~~~--~~~~~e----------------------------------~~~~~p~s~Yg~sK~~~ 174 (361)
T d1kewa_ 131 ISTDEVYGDLPHPDEVENSVT--LPLFTE----------------------------------TTAYAPSSPYSASKASS 174 (361)
T ss_dssp EEEGGGGCCCCCGGGSCTTSC--CCCBCT----------------------------------TSCCCCCSHHHHHHHHH
T ss_pred eccceeeCCCccCCccccccC--CCCccc----------------------------------CCCCCCCCHHHHHHHHH
Confidence 999999997543221 21111 111000 00114567899999999
Q ss_pred HHHHHHh--ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHH
Q 008324 239 EMLMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (570)
Q Consensus 239 E~lv~~~--~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~ 316 (570)
|.++..+ ..+++++++||+.||||...+ + .....++..+..|....+++++++.+|++||+|+|++++.++
T Consensus 175 E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~-----~--~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a~ai~~~~ 247 (361)
T d1kewa_ 175 DHLVRAWRRTYGLPTIVTNCSNNYGPYHFP-----E--KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVV 247 (361)
T ss_dssp HHHHHHHHHHHCCCEEEEEECEEESTTCCT-----T--SHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEecCceECcCCCc-----C--cHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHHHHHHHHHH
Confidence 9999887 458999999999999986532 2 234566777888887788899999999999999999999998
Q ss_pred HHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhccc
Q 008324 317 VAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 317 ~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~ 354 (570)
.... .+.+||++++ +++++.++++.+.+.++.
T Consensus 248 ~~~~----~~~~~Ni~s~--~~~s~~~~~~~i~~~~~~ 279 (361)
T d1kewa_ 248 TEGK----AGETYNIGGH--NEKKNLDVVFTICDLLDE 279 (361)
T ss_dssp HHCC----TTCEEEECCC--CEEEHHHHHHHHHHHHHH
T ss_pred hcCC----CCCeEEECCC--CCcchHHHHhHhhhhccc
Confidence 7332 2579999998 899999999999877654
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.97 E-value=9e-30 Score=261.62 Aligned_cols=266 Identities=17% Similarity=0.189 Sum_probs=202.5
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCccc-HHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS-AALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~-~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+-|+|||||||||||++|+++|++.| ++|++++|...+.. ..+++. .... .....++.+
T Consensus 15 ~~k~iLVTG~tGfIGs~lv~~L~~~g---~~V~~~d~~~~~~~~~~~~~~-------------~~~~----~~~~~~~~~ 74 (341)
T d1sb8a_ 15 QPKVWLITGVAGFIGSNLLETLLKLD---QKVVGLDNFATGHQRNLDEVR-------------SLVS----EKQWSNFKF 74 (341)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCHHHHHHHH-------------HHSC----HHHHTTEEE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCc---CEEEEEECCCCcchhhHHHHH-------------Hhhh----hcccCCeeE
Confidence 45899999999999999999999999 67888887554332 222222 1110 001267899
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceee
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f---~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~ 166 (570)
+.+|+. +...........++|+|+||.... .++....+++|+.||.+++++|++. ++++|||+||+.+|
T Consensus 75 ~~~d~~-------d~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-~~~~~i~~SS~~vy 146 (341)
T d1sb8a_ 75 IQGDIR-------NLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAASSSTY 146 (341)
T ss_dssp EECCTT-------SHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGG
T ss_pred Eeeccc-------cccccccccccccccccccccccccccccCccchhheeehhHHHHHHHHHhc-CCceEEEcccceee
Confidence 999999 555555677789999999987643 3556677899999999999999997 78999999999999
Q ss_pred cCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-
Q 008324 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (570)
Q Consensus 167 ~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~- 245 (570)
|..++ .++.|+.+. .+.+.|+.||.++|+++..+
T Consensus 147 g~~~~----~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~~~ 181 (341)
T d1sb8a_ 147 GDHPG----LPKVEDTIG-----------------------------------------KPLSPYAVTKYVNELYADVFS 181 (341)
T ss_dssp TTCCC----SSBCTTCCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHH
T ss_pred CCCCC----CCccCCCCC-----------------------------------------CCCCcchHHHHHHHHHHHHHH
Confidence 87542 222222222 34688999999999999876
Q ss_pred -ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCC
Q 008324 246 -KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (570)
Q Consensus 246 -~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 324 (570)
..+++++|+||+.|||+...|-..+ . .....++..+..|....+.+++.+.+|++||+|+|.|+..++..... .
T Consensus 182 ~~~~i~~~ilR~~~v~G~~~~~~~~~-~--~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~--~ 256 (341)
T d1sb8a_ 182 RCYGFSTIGLRYFNVFGRRQDPNGAY-A--AVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLD--A 256 (341)
T ss_dssp HHHCCCCEEEEECCEECTTCCCCSTT-C--CHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGG--G
T ss_pred HHhCCCeEEEEeceeeccCcCCCCch-h--hhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhcccc--c
Confidence 4589999999999999877553221 1 22334556777788778889999999999999999999888753222 2
Q ss_pred CCceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 325 ~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
.+.+||++++ +++|+.++++.+.+.++...
T Consensus 257 ~~~~~~~~~~--~~~si~~i~~~i~~~~~~~~ 286 (341)
T d1sb8a_ 257 RNQVYNIAVG--GRTSLNQLFFALRDGLAENG 286 (341)
T ss_dssp CSEEEEESCS--CCEEHHHHHHHHHHHHHHTT
T ss_pred cceeeeeccc--ccchHHHHHHHHHHHhcccc
Confidence 3679999998 89999999999999888654
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=1.7e-29 Score=259.46 Aligned_cols=264 Identities=18% Similarity=0.228 Sum_probs=190.9
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcc-cHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID-SAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~-~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
|+|||||||||||++|+++|++.| .+|++++|...+. ......+ . ...+++.++.
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g---~~V~~~d~~~~~~~~~~~~~~----------~-----------~~~~~~~~~~ 56 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNG---HDVIILDNLCNSKRSVLPVIE----------R-----------LGGKHPTFVE 56 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCTTHHHHHH----------H-----------HHTSCCEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCc---CEEEEEECCCCcchhhHHHHH----------h-----------hcCCCCEEEE
Confidence 689999999999999999999998 5678887744332 1111111 0 0136899999
Q ss_pred ccCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceee
Q 008324 92 GDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~ 166 (570)
+|++ +.+.+..+++ ++|+|||+||..... +.....+++|+.||.++|++|++. ++++|||+||..++
T Consensus 57 ~Dl~-------d~~~l~~~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~-~v~~~i~~Ss~~vy 128 (338)
T d1udca_ 57 GDIR-------NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATVY 128 (338)
T ss_dssp CCTT-------CHHHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGG
T ss_pred eecC-------CHHHHHHHHhccCCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHh-CCCEEEecCcceEE
Confidence 9999 5555556665 699999999976533 345678999999999999999997 89999999999998
Q ss_pred cCCCc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008324 167 GERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (570)
Q Consensus 167 ~~~~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (570)
+.... ...|.. + ...+.+.|+.+|..+|.++.++
T Consensus 129 ~~~~~~~~~e~~----~-----------------------------------------~~~p~~~Y~~sK~~~e~~~~~~ 163 (338)
T d1udca_ 129 GDQPKIPYVESF----P-----------------------------------------TGTPQSPYGKSKLMVEQILTDL 163 (338)
T ss_dssp CSCCSSSBCTTS----C-----------------------------------------CCCCSSHHHHHHHHHHHHHHHH
T ss_pred cccccccccccc----c-----------------------------------------cCCCcchHHHHHhhhhHHHHHH
Confidence 76432 111110 0 0145678999999999999865
Q ss_pred ---ccCCcEEEEecCceecCCCCCCCccccC--ccchHHHHHHHh--cCCceeeecC------CCeeeeeeehHHHHHHH
Q 008324 246 ---KENLSLVIIRPTVVSGTYKEPFPGWVED--LKTINTLFVASA--QGNLRCLVGE------TKVIMDVIPVDMVVNAM 312 (570)
Q Consensus 246 ---~~~lp~~IvRPsiV~g~~~ep~~gw~~~--~~~~~~~i~~~~--~G~~~~~~~~------~~~~~d~VpVDdva~ai 312 (570)
..+++++|+||+.|||+...+.-|.... .+.....+.... .+....+.++ +...+|+++|+|++.++
T Consensus 164 ~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~~~~~ 243 (338)
T d1udca_ 164 QKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGH 243 (338)
T ss_dssp HHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHH
T ss_pred HhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEeehhhhc
Confidence 3589999999999999876443221111 122333333333 2334444443 67789999999999998
Q ss_pred HHHHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 313 IVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 313 i~a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
..+....... ..+++||++++ +++|+.++++.+.+.++..+
T Consensus 244 ~~~~~~~~~~-~~~~i~Ni~~~--~~~si~e~~~~i~~~~g~~~ 284 (338)
T d1udca_ 244 VVAMEKLANK-PGVHIYNLGAG--VGNSVLDVVNAFSKACGKPV 284 (338)
T ss_dssp HHHHHHHTTC-CEEEEEEESCS--SCEEHHHHHHHHHHHHTSCC
T ss_pred cccccccccc-cCcceeeecCC--CCCcHHHHHHHHHHHHCCCC
Confidence 8877643332 23689999998 89999999999999988654
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.97 E-value=1.7e-29 Score=261.71 Aligned_cols=260 Identities=15% Similarity=0.050 Sum_probs=196.7
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+|||||||||||++|+++|+++| ++|+++.|.+...... ......+.
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~g---~~V~~~d~~~~~~~~~---------------------------~~~~~~~~ 63 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHEG---HYVIASDWKKNEHMTE---------------------------DMFCDEFH 63 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCSSSCG---------------------------GGTCSEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCc---CEEEEEeCCCccchhh---------------------------hcccCcEE
Confidence 57899999999999999999999999 6778887765432110 02456788
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc----cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceee
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF----DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f----~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~ 166 (570)
.+|+. +.+....+++++|+|||+|+.... ..........|+.||.+++++|++. ++++|||+||+.++
T Consensus 64 ~~D~~-------~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~-~vk~~i~~SS~~~~ 135 (363)
T d2c5aa1 64 LVDLR-------VMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYASSACIY 135 (363)
T ss_dssp ECCTT-------SHHHHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEGGGS
T ss_pred Eeech-------hHHHHHHHhhcCCeEeecccccccccccccccccccccccchhhHHHHhHHhh-Cccccccccccccc
Confidence 89998 444445777899999999987655 4566778899999999999999997 89999999999999
Q ss_pred cCCCc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008324 167 GERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (570)
Q Consensus 167 ~~~~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~ 245 (570)
+.... ..+|..... . ......+.+.|+.||.++|.+++.+
T Consensus 136 ~~~~~~~~~~~~~~~------~---------------------------------e~~~~~p~~~Yg~sK~~~E~~~~~~ 176 (363)
T d2c5aa1 136 PEFKQLETTNVSLKE------S---------------------------------DAWPAEPQDAFGLEKLATEELCKHY 176 (363)
T ss_dssp CGGGSSSSSSCEECG------G---------------------------------GGSSBCCSSHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccc------c---------------------------------cCCcCCCCCHHHHHHHHHHHHHHHH
Confidence 86432 122221100 0 0001144678999999999999877
Q ss_pred --ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCC
Q 008324 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQP 323 (570)
Q Consensus 246 --~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~ 323 (570)
..+++++++||+.|||+...+...+. .............+.....++++.+.+|+||++|+|.+++.++.. .
T Consensus 177 ~~~~gl~~~ilR~~~vyG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~~~---~- 250 (363)
T d2c5aa1 177 NKDFGIECRIGRFHNIYGPFGTWKGGRE--KAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKS---D- 250 (363)
T ss_dssp HHHHCCEEEEEEECCEECTTSCCSSSCC--CHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHS---S-
T ss_pred HHHhCCCEEEEEeeeEeccCCccccccc--ccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHHhC---C-
Confidence 34899999999999998764332222 122334444556666667889999999999999999999988752 1
Q ss_pred CCCceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 324 SDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 324 ~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
.+.+||++++ .++++.++++.+.+..+...
T Consensus 251 -~~~~~ni~~~--~~~s~~~l~~~i~~~~g~~~ 280 (363)
T d2c5aa1 251 -FREPVNIGSD--EMVSMNEMAEMVLSFEEKKL 280 (363)
T ss_dssp -CCSCEEECCC--CCEEHHHHHHHHHHTTTCCC
T ss_pred -CCCeEEEecC--CcccHHHHHHHHHHHhCCCC
Confidence 2568999999 89999999999999888654
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=1.4e-29 Score=260.12 Aligned_cols=270 Identities=18% Similarity=0.213 Sum_probs=198.4
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|++.+. .+|+++.+.+..... + .-.++++++.|
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~--~~V~~ld~~~~~~~~-------~-------------------~~~~~~~~i~~ 52 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDH--YEVYGLDIGSDAISR-------F-------------------LNHPHFHFVEG 52 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTT--CEEEEEESCCGGGGG-------G-------------------TTCTTEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--CEEEEEeCCCcchhh-------h-------------------ccCCCeEEEEC
Confidence 5899999999999999999999873 468888775433210 0 01368999999
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCC
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~ 169 (570)
|+++. .+..+.+.+++|+|||+||..... +.....+++|+.||.+++++|.+. +. +++++||+.+++..
T Consensus 53 Di~~~------~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~-~~-~~~~~ss~~~~~~~ 124 (342)
T d2blla1 53 DISIH------SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-RK-RIIFPSTSEVYGMC 124 (342)
T ss_dssp CTTTC------SHHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TC-EEEEECCGGGGBTC
T ss_pred ccCCh------HHHHHHHHhCCCccccccccccccccccCCccccccccccccccccccccc-cc-cccccccccccccc
Confidence 99853 344444667899999999987543 334567899999999999999986 54 55788999888864
Q ss_pred CcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--cc
Q 008324 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KE 247 (570)
Q Consensus 170 ~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~~ 247 (570)
.....+...+.... + ....+.+.|+.||.++|+++..+ ..
T Consensus 125 ~~~~~~~~~~~~~~-~-------------------------------------~~~~p~~~Y~~sK~~~E~~~~~~~~~~ 166 (342)
T d2blla1 125 SDKYFDEDHSNLIV-G-------------------------------------PVNKPRWIYSVSKQLLDRVIWAYGEKE 166 (342)
T ss_dssp CCSSBCTTTCCCBC-C-------------------------------------CTTCGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccc-c-------------------------------------ccCCCcchhhhcccchhhhhhhhhccc
Confidence 42221111110000 0 01133468999999999999887 45
Q ss_pred CCcEEEEecCceecCCCCCCCccccC-ccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCC
Q 008324 248 NLSLVIIRPTVVSGTYKEPFPGWVED-LKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 248 ~lp~~IvRPsiV~g~~~ep~~gw~~~-~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~ 326 (570)
+++++|+||+.++|+...+..+-... ......++..+..|....++++++..++++||+|+|+++..++..... ...+
T Consensus 167 ~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~~~-~~~g 245 (342)
T d2blla1 167 GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGN-RCDG 245 (342)
T ss_dssp CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGG-TTTT
T ss_pred CceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeehhhccc-cCCC
Confidence 89999999999999876544332222 233556677888888888899999999999999999999999874322 2337
Q ss_pred ceEEecCCCCCcccHHHHHHHHhhhcccCCCC
Q 008324 327 NIYHVGSSLRNPVTLVSILDYGFVYFTKKPWI 358 (570)
Q Consensus 327 ~iyni~s~~~~pit~~~l~~~i~~~~~~~p~~ 358 (570)
++||++++. +++|+.++++.+.+.++..+..
T Consensus 246 ~~~Nig~~~-~~~t~~~l~~~i~~~~~~~~~~ 276 (342)
T d2blla1 246 EIINIGNPE-NEASIEELGEMLLASFEKHPLR 276 (342)
T ss_dssp EEEEECCTT-SEEEHHHHHHHHHHHHHTCTTG
T ss_pred eEEEEeccc-chhHHHHHHHHHHHHhCCCccc
Confidence 899998762 4689999999999998876543
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=2.2e-28 Score=251.94 Aligned_cols=270 Identities=18% Similarity=0.188 Sum_probs=193.6
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHH-HHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAA-LRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~-~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
|.|||||||||||++|+++|++.| ++|+++.|........ .+.. . ...+++.++.
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g---~~V~~~d~~~~~~~~~~~~~~-~--------------------~~~~~v~~~~ 57 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENG---YDCVVADNLSNSTYDSVARLE-V--------------------LTKHHIPFYE 57 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCTHHHHHHH-H--------------------HHTSCCCEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCc---CeEEEEECCCCcchhHHHhHH-h--------------------hcccCCeEEE
Confidence 789999999999999999999998 5677777654432211 1111 0 0136788999
Q ss_pred ccCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceee
Q 008324 92 GDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f---~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~ 166 (570)
+|++ +.+.++.+++ ++|+|||+||.... .+.......+|+.||.+++++|++. ++++||++||..+|
T Consensus 58 ~Dl~-------d~~~l~~~~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~-~i~~~i~~SS~~vy 129 (347)
T d1z45a2 58 VDLC-------DRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFSSSATVY 129 (347)
T ss_dssp CCTT-------CHHHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGG
T ss_pred eecC-------CHHHHHHHHhccCCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhc-ccceEEeecceeee
Confidence 9999 4454445554 79999999998642 3455677899999999999999997 99999999999999
Q ss_pred cCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-
Q 008324 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (570)
Q Consensus 167 ~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~- 245 (570)
|...+...+.+++++.+. .+.+.|+.||.++|+++.++
T Consensus 130 g~~~~~~~~~~~~e~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~~~ 168 (347)
T d1z45a2 130 GDATRFPNMIPIPEECPL-----------------------------------------GPTNPYGHTKYAIENILNDLY 168 (347)
T ss_dssp CCGGGSTTCCSBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHH
T ss_pred cCcccCCCCCccccccCC-----------------------------------------CCCChhHhHHHHHHHHHHHHH
Confidence 976544444444433222 34588999999999999876
Q ss_pred ---ccCCcEEEEecCceecCCCCCCCcccc--CccchHHHHHHHhcC--CceeeecC------CCeeeeeeehHHHHHHH
Q 008324 246 ---KENLSLVIIRPTVVSGTYKEPFPGWVE--DLKTINTLFVASAQG--NLRCLVGE------TKVIMDVIPVDMVVNAM 312 (570)
Q Consensus 246 ---~~~lp~~IvRPsiV~g~~~ep~~gw~~--~~~~~~~~i~~~~~G--~~~~~~~~------~~~~~d~VpVDdva~ai 312 (570)
..+++++++||+.|||+...+.-|... ..+.....+.....| ....+.++ +....|++++.+++.++
T Consensus 169 ~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~~~~~~~~~ 248 (347)
T d1z45a2 169 NSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGH 248 (347)
T ss_dssp HHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHH
T ss_pred HhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeeeeeecccccc
Confidence 357999999999999986644333211 122344444444333 33333443 34678899999999999
Q ss_pred HHHHHHhhCC---CCCCceEEecCCCCCcccHHHHHHHHhhhcccCCC
Q 008324 313 IVAMVAHAKQ---PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPW 357 (570)
Q Consensus 313 i~a~~~~~~~---~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p~ 357 (570)
+.++...... ....++||++++ +++++.++++.+.+.++....
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~Ni~~~--~~~s~~e~~~~i~~~~~~~~~ 294 (347)
T d1z45a2 249 IAALQYLEAYNENEGLCREWNLGSG--KGSTVFEVYHAFCKASGIDLP 294 (347)
T ss_dssp HHHHHHHHHSCTTCCEEEEEEESCS--CCEEHHHHHHHHHHHHTCCCC
T ss_pred cccccccccccccccccccceecCC--CcccHHHHHHHHHHHHCCCCc
Confidence 8887643221 223579999998 899999999999999886543
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.97 E-value=1.8e-28 Score=252.39 Aligned_cols=267 Identities=21% Similarity=0.246 Sum_probs=193.7
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.|+|||||||||||++|+++|++.|++|. |+++.+...... ..+ ......+++.++.
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~-v~~~d~~~~~~~-~~~---------------------~~~~~~~~i~~~~ 58 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVH-VTVLDKLTYAGN-KAN---------------------LEAILGDRVELVV 58 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCE-EEEEECCCTTCC-GGG---------------------TGGGCSSSEEEEE
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeE-EEEEeCCCcccc-HHH---------------------HHHhhcCCeEEEE
Confidence 58999999999999999999999997653 444433221111 000 0112247899999
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecC
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~ 168 (570)
+|+. +.+....+++..+.|+|+|+..... .+....+++|+.||.++++.|++. + .++|++||+.+||.
T Consensus 59 ~Di~-------d~~~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~-~-~k~i~~ss~~vyg~ 129 (346)
T d1oc2a_ 59 GDIA-------DAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-D-IRFHHVSTDEVYGD 129 (346)
T ss_dssp CCTT-------CHHHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-T-CEEEEEEEGGGGCC
T ss_pred ccCC-------CHHHHHHHHhhhhhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhccc-c-ccccccccceEecc
Confidence 9999 6666778889999999999987542 344567899999999999999986 4 47999999999985
Q ss_pred CCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--c
Q 008324 169 RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--K 246 (570)
Q Consensus 169 ~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~ 246 (570)
.. ..++.+.....+.+. .+......+.+.|+.||.++|.+++.+ .
T Consensus 130 ~~-~~~~~~~~~~~~~~~--------------------------------~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~ 176 (346)
T d1oc2a_ 130 LP-LREDLPGHGEGPGEK--------------------------------FTAETNYNPSSPYSSTKAASDLIVKAWVRS 176 (346)
T ss_dssp BC-CGGGSTTTTCSTTSS--------------------------------BCTTSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred cC-ccccccccccCcccc--------------------------------cccCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 32 111111111000000 000011145688999999999999876 4
Q ss_pred cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCC
Q 008324 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~ 326 (570)
.+++++|+||++||||...+- ......+.....|....++++++..++++|++|+|++++.++.... .+
T Consensus 177 ~~i~~~ilR~~~vyGp~~~~~-------~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~~~~----~~ 245 (346)
T d1oc2a_ 177 FGVKATISNCSNNYGPYQHIE-------KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGR----MG 245 (346)
T ss_dssp HCCEEEEEEECCEESTTCCTT-------SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHCC----TT
T ss_pred cCCCEEEEeecceeCCCCCcc-------chhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHHhhcc----cC
Confidence 589999999999999765321 2233455566677777888999999999999999999988775322 26
Q ss_pred ceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 327 NIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 327 ~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
.+||++++ ++.++.++++.+.+.++...
T Consensus 246 ~~~~~~~~--~~~~~~~~~~~i~~~~~~~~ 273 (346)
T d1oc2a_ 246 ETYLIGAD--GEKNNKEVLELILEKMGQPK 273 (346)
T ss_dssp CEEEECCS--CEEEHHHHHHHHHHHTTCCT
T ss_pred cccccccc--ccccchHHHHHHHHHhCCCC
Confidence 78999999 89999999999999988643
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.96 E-value=3.1e-29 Score=257.95 Aligned_cols=288 Identities=16% Similarity=0.125 Sum_probs=193.9
Q ss_pred CCcccHHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccc
Q 008324 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLN 80 (570)
Q Consensus 1 ~~~~~i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~ 80 (570)
|++..|++ ||+|||||||||||++|+++|++.| ++|++++|+.......++.. ...
T Consensus 3 ~~~~~~~~---gk~VlVTG~sGfIGs~l~~~Ll~~G---~~V~~~vR~~~~~~~~~~~~-------------~~~----- 58 (342)
T d1y1pa1 3 IDNAVLPE---GSLVLVTGANGFVASHVVEQLLEHG---YKVRGTARSASKLANLQKRW-------------DAK----- 58 (342)
T ss_dssp STTCSSCT---TCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHHH-------------HHH-----
T ss_pred CCCCCCCC---cCEEEEECCCCHHHHHHHHHHHHCc---CEEEEEeCCchhHHHHHHhh-------------hcc-----
Confidence 34444443 9999999999999999999999999 67889999753322111111 110
Q ss_pred cccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEE
Q 008324 81 SFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 81 ~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~v 160 (570)
........+.+|+.++ +....++.++|+|+|+|+...+........+.|+.||.+++++|.+.+++++|||+
T Consensus 59 -~~~~~~~~~~~Dl~~~-------~~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~ 130 (342)
T d1y1pa1 59 -YPGRFETAVVEDMLKQ-------GAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLT 130 (342)
T ss_dssp -STTTEEEEECSCTTST-------TTTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEE
T ss_pred -ccccccEEEeccccch-------hhhhhhcccchhhhhhcccccccccccccccchhhhHHHHHHhhhccccccccccc
Confidence 0123455688999953 33346778999999999999888888888999999999999999998789999999
Q ss_pred ecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHH
Q 008324 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (570)
Q Consensus 161 STa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~ 240 (570)
||+.+.+...... +..+.+....+.+...... . ........+.+.|+.||..+|+
T Consensus 131 SS~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~--------~----------------~~e~~~~~p~~~Y~~sK~~~E~ 185 (342)
T d1y1pa1 131 SSTVSALIPKPNV-EGIYLDEKSWNLESIDKAK--------T----------------LPESDPQKSLWVYAASKTEAEL 185 (342)
T ss_dssp CCGGGTCCCCTTC-CCCEECTTCCCHHHHHHHH--------H----------------SCTTSTTHHHHHHHHHHHHHHH
T ss_pred ccceeeccCCCCC-CCccccccccccccccccc--------c----------------ccccCCCCCcCcccchhHhHHH
Confidence 9976543322111 1111111111211111000 0 0000111234679999999999
Q ss_pred HHHHh----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHH
Q 008324 241 LMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (570)
Q Consensus 241 lv~~~----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~ 316 (570)
+++.+ ..+++++++||+.|+|+...|.. .......++..+.+|...... .++...++|+|+|+|.+++.++
T Consensus 186 ~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~----~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~v~v~Dva~~~i~~l 260 (342)
T d1y1pa1 186 AAWKFMDENKPHFTLNAVLPNYTIGTIFDPET----QSGSTSGWMMSLFNGEVSPAL-ALMPPQYYVSAVDIGLLHLGCL 260 (342)
T ss_dssp HHHHHHHHHCCSSEEEEEEESEEECCCSCTTT----CCCHHHHHHHHHHTTCCCHHH-HTCCSEEEEEHHHHHHHHHHHH
T ss_pred HHHHhhhhcccccccceecccceeCCCCCccc----cccchHHHHHHHHcCCcCccc-CCccceeeeeHHHHHHHHHHhh
Confidence 88766 34688999999999998654321 222345566667777644332 3445679999999999999888
Q ss_pred HHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 317 VAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 317 ~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
... . . ...|+++++ +++++.|+++.+.+.+...+
T Consensus 261 ~~~-~--~-~g~~~~~~~--~~~t~~eia~~i~k~~p~~~ 294 (342)
T d1y1pa1 261 VLP-Q--I-ERRRVYGTA--GTFDWNTVLATFRKLYPSKT 294 (342)
T ss_dssp HCT-T--C-CSCEEEECC--EEECHHHHHHHHHHHCTTSC
T ss_pred cCc-c--c-cceEEEEcC--CceEHHHHHHHHHHHcCCCc
Confidence 632 1 1 334667777 78999999999999875443
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.96 E-value=5.5e-28 Score=253.00 Aligned_cols=281 Identities=14% Similarity=0.096 Sum_probs=188.3
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEE---cCC-----------CcccHHHHHHHHHhhhhhHHHHHhhhcc
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV---RAA-----------DIDSAALRFQNEVLAKDVFNVLKEKWGT 77 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lv---R~~-----------~~~~~~~rl~~~l~~~~~f~~l~~~~~~ 77 (570)
||+|||||||||||++|+++|++.| +.|+++. |.. ......+++. ++...
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g---~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~--- 64 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKN---YEVCIVDNLVRRLFDHQLGLESLTPIASIHDRIS----------RWKAL--- 64 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHH----------HHHHH---
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCc---CEEEEEecCCcccccccccccccccccchHHHHH----------HHHhh---
Confidence 7999999999999999999999999 4566653 211 1111112211 11111
Q ss_pred ccccccCCceEEEeccCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCcc------ccHHHHHHHhHHHHHHHHHHHH
Q 008324 78 RLNSFISEKITFVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD------ERYDVAFGINTLGVIHLVNFAK 149 (570)
Q Consensus 78 ~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~------~~~~~~~~~Nv~gt~~ll~la~ 149 (570)
..++++++.||++ +.+.++.+++ ++|+|||+||..... +.....+++|+.||.+++++|+
T Consensus 65 -----~~~~i~~~~~Dl~-------d~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~ 132 (393)
T d1i24a_ 65 -----TGKSIELYVGDIC-------DFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIK 132 (393)
T ss_dssp -----HCCCCEEEESCTT-------SHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----cCCCcEEEEccCC-------CHHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHH
Confidence 1368999999999 5555667766 469999999976432 2234568999999999999999
Q ss_pred HccCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc
Q 008324 150 KCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (570)
Q Consensus 150 ~~~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
+....+.++++||..+++.......|.......... .+ +......+.+
T Consensus 133 ~~~~~~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~--------------------~~------------~~~~~~~p~~ 180 (393)
T d1i24a_ 133 EFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGR--------------------TD------------TLPYPKQASS 180 (393)
T ss_dssp HHCTTCEEEEECCGGGGCCCSSCBCSSEEEEEETTE--------------------EE------------EEECCCCCCS
T ss_pred Hhccccceeecccccccccccccccccccccccccc--------------------cc------------cccccccccc
Confidence 985556788888888887654333332211000000 00 0000113457
Q ss_pred hHHHHHHHHHHHHHHh--ccCCcEEEEecCceecCCCCCCCc--c----cc--Cc--cchHHHHHHHhcCCceeeecCCC
Q 008324 230 TYVFTKTMGEMLMQQS--KENLSLVIIRPTVVSGTYKEPFPG--W----VE--DL--KTINTLFVASAQGNLRCLVGETK 297 (570)
Q Consensus 230 ~Y~~sK~~aE~lv~~~--~~~lp~~IvRPsiV~g~~~ep~~g--w----~~--~~--~~~~~~i~~~~~G~~~~~~~~~~ 297 (570)
.|+.||.++|.++..+ ..+++++++||+.|||+...+... + .+ .. .....++.....|....+++++.
T Consensus 181 ~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~ 260 (393)
T d1i24a_ 181 FYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGG 260 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSC
T ss_pred HHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccchhhhhHHhhcCCeeEEeeecc
Confidence 8999999999999876 458999999999999987643211 0 00 00 12345666778888888899999
Q ss_pred eeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 298 VIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 298 ~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
+.+|++||+|+|++++.++... ... + .|++.++..+++++.++++++.+..+..+
T Consensus 261 ~~rd~v~v~D~~~a~~~~~~~~-~~~--g-~~~~~~~~~~~~si~el~~~i~~~~~~~~ 315 (393)
T d1i24a_ 261 QTRGYLDIRDTVQCVEIAIANP-AKA--G-EFRVFNQFTEQFSVNELASLVTKAGSKLG 315 (393)
T ss_dssp CEEEEEEHHHHHHHHHHHHHSC-CCT--T-CEEEEEECSEEEEHHHHHHHHHHHHHTTT
T ss_pred cccccccccchHHHHHHHHHhh-ccc--c-eeeeecCCCCeeEHHHHHHHHHHHHHhhC
Confidence 9999999999999999998632 221 2 23332111267999999999988765443
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.96 E-value=1.1e-27 Score=243.20 Aligned_cols=256 Identities=16% Similarity=0.133 Sum_probs=191.2
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|++.|++.| ++|+++.|...... .++++. + ...+++.++.+
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g---~~V~~~~r~~~~~~-~~~l~~-~-------------------~~~~~~~~~~~ 56 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKG---YRVHGLVARRSSDT-RWRLRE-L-------------------GIEGDIQYEDG 56 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSSCC-CHHHHH-T-------------------TCGGGEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCc---CEEEEEECCCCccc-HHHHHH-h-------------------cccCCcEEEEc
Confidence 789999999999999999999998 67899998764322 233331 1 01367899999
Q ss_pred cCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeec
Q 008324 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~ 167 (570)
|+++ .+.....+. ..++++|+|+..... ++....+++|+.||.+++++|++.+..++|+++||+.+++
T Consensus 57 Dl~d-------~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~ 129 (321)
T d1rpna_ 57 DMAD-------ACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFG 129 (321)
T ss_dssp CTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGC
T ss_pred cccC-------hHHhhhhhccccccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcC
Confidence 9994 443434443 477999998876532 4567789999999999999999986667899999999887
Q ss_pred CCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--
Q 008324 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (570)
Q Consensus 168 ~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~-- 245 (570)
.... ..++|+++. .+.+.|+.||.++|.++..+
T Consensus 130 ~~~~----~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~~~~ 164 (321)
T d1rpna_ 130 LIQA----ERQDENTPF-----------------------------------------YPRSPYGVAKLYGHWITVNYRE 164 (321)
T ss_dssp SCSS----SSBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHHH
T ss_pred cccC----CCCCCCCCc-----------------------------------------cccChhHHHHHHHHHHHHHHHh
Confidence 6432 122222222 34578999999999999887
Q ss_pred ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCC-ceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCC
Q 008324 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGN-LRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~-~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 324 (570)
..+++++++||+.||||...+ . +. ...+...+.....|. .....+++++.+|++||+|+|++++.++...
T Consensus 165 ~~~~~~~~lr~~~vyGp~~~~-~-~~--~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~----- 235 (321)
T d1rpna_ 165 SFGLHASSGILFNHESPLRGI-E-FV--TRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD----- 235 (321)
T ss_dssp HHCCCEEEEEECCEECTTSCT-T-SH--HHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSS-----
T ss_pred hcCCcEEEEEEecccCCCccc-c-cc--HHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcC-----
Confidence 468999999999999986422 0 11 122344555555554 4456789999999999999999999988622
Q ss_pred CCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 325 ~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
...+||++++ ++.++.++++.+.+.++..
T Consensus 236 ~~~~~ni~~~--~~~s~~~~~~~~~~~~~~~ 264 (321)
T d1rpna_ 236 KADDYVVATG--VTTTVRDMCQIAFEHVGLD 264 (321)
T ss_dssp SCCCEEECCS--CEEEHHHHHHHHHHTTTCC
T ss_pred CcCCceeccc--ccceehhhhHHHHHHhCCC
Confidence 1467999998 8999999999999887754
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.3e-27 Score=245.66 Aligned_cols=265 Identities=18% Similarity=0.208 Sum_probs=188.9
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCc-------ccHHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI-------DSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~-------~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
|+|||||||||||++|+++|++.| ++|+++.|.... ....+++. . ....
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g---~~V~~ld~~~~~~~~~~~~~~~~~~~~-------------~--------~~~~ 58 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAG---YLPVVIDNFHNAFRGGGSLPESLRRVQ-------------E--------LTGR 58 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTT---CCEEEEECSSSSCBCSSSSBHHHHHHH-------------H--------HHTC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCc---CEEEEEECCCccccccccchHHHHHHH-------------H--------hcCC
Confidence 789999999999999999999999 566777642211 11222222 0 1137
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEE
Q 008324 86 KITFVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~v 160 (570)
++.++.+|++ +.+.++.++. ++++|+|+||..... ......+++|+.||.+++++|++. ++++|+|+
T Consensus 59 ~~~~~~~Dl~-------d~~~l~~~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~-~v~~~i~~ 130 (346)
T d1ek6a_ 59 SVEFEEMDIL-------DQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFS 130 (346)
T ss_dssp CCEEEECCTT-------CHHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEE
T ss_pred CcEEEEeecc-------ccccccccccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhc-Cccccccc
Confidence 8899999999 4554545443 477899999976532 345567899999999999999997 89999999
Q ss_pred ecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHH
Q 008324 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (570)
Q Consensus 161 STa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~ 240 (570)
||+.+++.......+...+ ...+.++|+.+|..+|+
T Consensus 131 ss~~~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~Y~~~k~~~e~ 166 (346)
T d1ek6a_ 131 SSATVYGNPQYLPLDEAHP--------------------------------------------TGGCTNPYGKSKFFIEE 166 (346)
T ss_dssp EEGGGGCSCSSSSBCTTSC--------------------------------------------CCCCSSHHHHHHHHHHH
T ss_pred ccceeeecccccccccccc--------------------------------------------ccccCChHHHHHHHHHH
Confidence 9999988754221111110 01456789999999999
Q ss_pred HHHHh---ccCCcEEEEecCceecCCCCCCCcccc--CccchHHHHH--HHhcCCceeeec------CCCeeeeeeehHH
Q 008324 241 LMQQS---KENLSLVIIRPTVVSGTYKEPFPGWVE--DLKTINTLFV--ASAQGNLRCLVG------ETKVIMDVIPVDM 307 (570)
Q Consensus 241 lv~~~---~~~lp~~IvRPsiV~g~~~ep~~gw~~--~~~~~~~~i~--~~~~G~~~~~~~------~~~~~~d~VpVDd 307 (570)
.+.++ ..+++.+++||+.+||+......|... ........+. ..+++....+.+ ++.+.+|++||+|
T Consensus 167 ~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D 246 (346)
T d1ek6a_ 167 MIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVD 246 (346)
T ss_dssp HHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHH
T ss_pred HHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEeEEEEEe
Confidence 99876 358999999999999987643322211 1122233333 334444444433 4567899999999
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
+|+++..++...... ..+++||++++ +++++.|+++.+.+.++..+
T Consensus 247 ~a~~~~~~~~~~~~~-~~~~i~Ni~~~--~~~s~~dl~~~i~~~~~~~~ 292 (346)
T d1ek6a_ 247 LAKGHIAALRKLKEQ-CGCRIYNLGTG--TGYSVLQMVQAMEKASGKKI 292 (346)
T ss_dssp HHHHHHHHHHHHTTT-CCEEEEEECCS--CCEEHHHHHHHHHHHHCSCC
T ss_pred ccchhhhhccccccc-cCceEEEeCCC--CcccHHHHHHHHHHHhCCCC
Confidence 999998887644332 23689999998 89999999999999998754
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.2e-27 Score=245.58 Aligned_cols=263 Identities=15% Similarity=0.132 Sum_probs=186.1
Q ss_pred CEE-EEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 13 KTI-LVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 13 k~V-lITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
|+| ||||||||||++|+++|++.| ++|++++|....... .++. .+. .. .......++.++.
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g---~~V~~i~r~~~~~~~-~~~~-~~~---------~~----~~~~~~~~~~~~~ 62 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKG---YEVHGIVRRSSSFNT-GRIE-HLY---------KN----PQAHIEGNMKLHY 62 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSSCCC-TTTG-GGC----------------------CEEEEE
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCc---CEEEEEECCCcccch-hhHH-HHh---------hc----hhhhccCCcEEEE
Confidence 678 999999999999999999999 678999985432110 0100 000 00 0011236789999
Q ss_pred ccCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHcc--CceEEEEEecce
Q 008324 92 GDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCV--KLKVFVHVSTAY 164 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~--~l~~~V~vSTa~ 164 (570)
+|++ +.+....++. ++++|+|+||..... ++....+++|+.||.+++++|+++. +.++|||+||+.
T Consensus 63 ~Dl~-------d~~~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~ 135 (347)
T d1t2aa_ 63 GDLT-------DSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSE 135 (347)
T ss_dssp CCTT-------CHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGG
T ss_pred eecC-------CchhhHHHHhhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchh
Confidence 9999 4444455554 578999999876543 4556668999999999999999862 446899999999
Q ss_pred eecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHH
Q 008324 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (570)
Q Consensus 165 v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~ 244 (570)
|||... +.+++|+++. .+.+.|+.||.+||+++..
T Consensus 136 vyg~~~----~~~~~E~~~~-----------------------------------------~P~~~Yg~sK~~aE~~~~~ 170 (347)
T d1t2aa_ 136 LYGKVQ----EIPQKETTPF-----------------------------------------YPRSPYGAAKLYAYWIVVN 170 (347)
T ss_dssp GTCSCS----SSSBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHH
T ss_pred eecCCC----CCCCCCCCCC-----------------------------------------CCCCHHHHHHHHHHHHHHH
Confidence 998633 2333333332 3457899999999999987
Q ss_pred h--ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCC
Q 008324 245 S--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQ 322 (570)
Q Consensus 245 ~--~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~ 322 (570)
+ ..+++++++||+.|||+...+..+ .. .....++.....+......++++..+++++|+|+|++++.++....
T Consensus 171 ~~~~~~~~~~ilr~~~vyGp~~~~~~~--~~-~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~-- 245 (347)
T d1t2aa_ 171 FREAYNLFAVNGILFNHESPRRGANFV--TR-KISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE-- 245 (347)
T ss_dssp HHHHHCCEEEEEEECCEECTTSCTTSH--HH-HHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS--
T ss_pred HHHHhCCCEEEEEecceeCCCCCCCcc--cc-ccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHHHhhcCC--
Confidence 6 458999999999999986532111 10 1112233333444556777899999999999999999999886321
Q ss_pred CCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 323 PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 323 ~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
...|+++.+ ...++.+.........++.
T Consensus 246 ---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 273 (347)
T d1t2aa_ 246 ---PEDFVIATG--EVHSVREFVEKSFLHIGKT 273 (347)
T ss_dssp ---CCCEEECCS--CCEEHHHHHHHHHHHTTCC
T ss_pred ---Cccceeccc--cccccchhhhhhhhhhcce
Confidence 346888887 7899999999888877764
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.96 E-value=3.1e-27 Score=246.51 Aligned_cols=286 Identities=13% Similarity=0.164 Sum_probs=190.0
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEc---CCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR---AADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR---~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.+|+|||||||||||++|+++||+.+. ++|+++.+ +.......+... .+ ...+. .............+
T Consensus 1 ~~MKVLITG~tGfIGs~lv~~LL~~~~--~~V~~~D~l~~~~~~~~~~~~~~-~~-----~~~~~-~~~~~~~~~~~~~~ 71 (383)
T d1gy8a_ 1 SHMRVLVCGGAGYIGSHFVRALLRDTN--HSVVIVDSLVGTHGKSDHVETRE-NV-----ARKLQ-QSDGPKPPWADRYA 71 (383)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHHCC--CEEEEEECCTTTTTCCTTSCCHH-HH-----HHHHH-HSCSSCCTTTTCCC
T ss_pred CcCEEEEeCCCcHHHHHHHHHHHHhCC--CEEEEEecCCcccccchhhhhhh-hH-----HHHhh-hhccccccccccce
Confidence 368999999999999999999997532 56777643 322111111111 00 00011 11111112223568
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhC---CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEe
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELWN---ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~---~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vS 161 (570)
.++.||++ +.+.++.+++ .+|+|||+||..... +......++|+.||.+++++|++. ++++++++|
T Consensus 72 ~~~~~Di~-------d~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~-~~~~~~~~~ 143 (383)
T d1gy8a_ 72 ALEVGDVR-------NEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIFSS 143 (383)
T ss_dssp EEEESCTT-------CHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEE
T ss_pred EEEECccc-------CHHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhcc-CCccccccc
Confidence 89999999 4554555553 589999999987643 345567899999999999999997 889999999
Q ss_pred cceeecCCCc---ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHH
Q 008324 162 TAYVAGERTG---LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (570)
Q Consensus 162 Ta~v~~~~~g---~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~a 238 (570)
|..+++.... ..++.++.++++. .+.+.|+.||..+
T Consensus 144 s~~~~~~~~~~~~~~~~~~~~e~~~~-----------------------------------------~p~~~Y~~sK~~~ 182 (383)
T d1gy8a_ 144 SAAIFGNPTMGSVSTNAEPIDINAKK-----------------------------------------SPESPYGESKLIA 182 (383)
T ss_dssp EGGGTBSCCC-----CCCCBCTTSCC-----------------------------------------BCSSHHHHHHHHH
T ss_pred ccccccccccccccccccccccccCC-----------------------------------------CCCCHHHhhHhHH
Confidence 9988876432 1122222222111 3468899999999
Q ss_pred HHHHHHh--ccCCcEEEEecCceecCCCCCC-CccccCccchHHHHH-----HH------------hcCCceeee-----
Q 008324 239 EMLMQQS--KENLSLVIIRPTVVSGTYKEPF-PGWVEDLKTINTLFV-----AS------------AQGNLRCLV----- 293 (570)
Q Consensus 239 E~lv~~~--~~~lp~~IvRPsiV~g~~~ep~-~gw~~~~~~~~~~i~-----~~------------~~G~~~~~~----- 293 (570)
|+++..+ ..+++++++||+.|||+...+. +.+........+.+. .. ..+....+.
T Consensus 183 e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 262 (383)
T d1gy8a_ 183 ERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYP 262 (383)
T ss_dssp HHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSS
T ss_pred HHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhccccccchhhhhhhcCCceEEeCCccc
Confidence 9999987 4589999999999999987542 223332222222221 11 122222333
Q ss_pred -cCCCeeeeeeehHHHHHHHHHHHHHhhCC-----CCCCceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 294 -GETKVIMDVIPVDMVVNAMIVAMVAHAKQ-----PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 294 -~~~~~~~d~VpVDdva~aii~a~~~~~~~-----~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
+++.+.+|++||+|+|++++.++...... ...+++||++++ +++++.|+++.+.+.++..+
T Consensus 263 ~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~--~~~s~~el~~~i~~~~~~~~ 329 (383)
T d1gy8a_ 263 TPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTS--RGYSVREVIEVARKTTGHPI 329 (383)
T ss_dssp STTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCS--CCEEHHHHHHHHHHHHCCCC
T ss_pred cCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCC--CceeHHHHHHHHHHHhCCCC
Confidence 34677899999999999999988743221 122579999999 89999999999999988654
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=2.3e-26 Score=232.86 Aligned_cols=249 Identities=12% Similarity=0.070 Sum_probs=179.1
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
-|+|||||||||||++|++.|++.+. .+.++.+. . .
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~---~vi~~~~~------------------------------------~-----~ 37 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGD---VELVLRTR------------------------------------D-----E 37 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTT---EEEECCCT------------------------------------T-----T
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcC---EEEEecCc------------------------------------h-----h
Confidence 36899999999999999999999883 34433221 1 1
Q ss_pred ccCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCcc----ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEeccee
Q 008324 92 GDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD----ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~----~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v 165 (570)
.|+. +.+....+++ .+|+|||+|+.+... .+....+++|+.||.+++++|++. ++++|||+||..+
T Consensus 38 ~~~~-------~~~~~~~~~~~~~~d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~v~~~i~~SS~~v 109 (315)
T d1e6ua_ 38 LNLL-------DSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSCI 109 (315)
T ss_dssp CCTT-------CHHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGG
T ss_pred cccc-------CHHHHHHHHhhcCCCEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECCceE
Confidence 3555 3333334443 589999999876542 345566889999999999999997 9999999999999
Q ss_pred ecCCCc-ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC-chHHHHHHHHHHHHH
Q 008324 166 AGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP-NTYVFTKTMGEMLMQ 243 (570)
Q Consensus 166 ~~~~~g-~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-n~Y~~sK~~aE~lv~ 243 (570)
||.... .++|....+.++ .++ +.|+.||..+|++++
T Consensus 110 yg~~~~~~~~E~~~~~~~~------------------------------------------~~~~~~Y~~sK~~~E~~~~ 147 (315)
T d1e6ua_ 110 YPKLAKQPMAESELLQGTL------------------------------------------EPTNEPYAIAKIAGIKLCE 147 (315)
T ss_dssp SCTTCCSSBCGGGTTSSCC------------------------------------------CGGGHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCccCCccccCCC------------------------------------------CCCCCHHHHHHHHHHHHHH
Confidence 986432 344432211111 223 369999999999998
Q ss_pred Hh--ccCCcEEEEecCceecCCCCCCCcc--ccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHh
Q 008324 244 QS--KENLSLVIIRPTVVSGTYKEPFPGW--VEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAH 319 (570)
Q Consensus 244 ~~--~~~lp~~IvRPsiV~g~~~ep~~gw--~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~ 319 (570)
.+ ..+++++|+||+.||||...+.... ................+......+++...+++++++|++.++..++...
T Consensus 148 ~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~~~~~~ 227 (315)
T d1e6ua_ 148 SYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELA 227 (315)
T ss_dssp HHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSC
T ss_pred HHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHHhhhhc
Confidence 87 3489999999999999876432111 1111222334455666777788899999999999999999999877532
Q ss_pred h-----CCCCCCceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 320 A-----KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 320 ~-----~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
. .......+++++++ .+.+..++++.+.+..+...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~i~~~~~~~~ 267 (315)
T d1e6ua_ 228 HEVWLENTQPMLSHINVGTG--VDCTIRELAQTIAKVVGYKG 267 (315)
T ss_dssp HHHHHHTSBTTBCCEEESCS--CCEEHHHHHHHHHHHHTCCS
T ss_pred cccccccccccccccccCCC--cchHHHHHHHHHHHHhCCCc
Confidence 2 11223568999988 88999999999999887653
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.94 E-value=3.9e-26 Score=233.37 Aligned_cols=261 Identities=15% Similarity=0.125 Sum_probs=183.4
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|++||||||||||++|++.|++.| ++|++++|....... +++. .+. .. ........+.++.+
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g---~~V~~~~r~~~~~~~-~~~~-~~~---------~~----~~~~~~~~~~~~~~ 63 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKG---YEVHGLIRRSSNFNT-QRIN-HIY---------ID----PHNVNKALMKLHYA 63 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSSCCC-TTTT-TTC---------------------CCEEEEEC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCc---CEEEEEECCCcccch-hhhh-hhh---------hh----hhhccccceEEEEc
Confidence 789999999999999999999999 788999996532110 0000 000 00 00011356889999
Q ss_pred cCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHcc----CceEEEEEecc
Q 008324 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCV----KLKVFVHVSTA 163 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~----~l~~~V~vSTa 163 (570)
|++ +.+.....++ ++|+|||+||..... +........|+.|+.+++++|++.. ...++++.||+
T Consensus 64 Di~-------~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~ 136 (339)
T d1n7ha_ 64 DLT-------DASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSS 136 (339)
T ss_dssp CTT-------CHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEG
T ss_pred ccc-------CHHHHHHHHhhhccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccc
Confidence 999 4444444443 589999999987643 4556778999999999999998652 33478889999
Q ss_pred eeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHH
Q 008324 164 YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (570)
Q Consensus 164 ~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~ 243 (570)
++++.....++|. .+. .+.+.|+.||..+|.++.
T Consensus 137 ~~~~~~~~~~~E~-----~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~ 170 (339)
T d1n7ha_ 137 EMFGSTPPPQSET-----TPF-----------------------------------------HPRSPYAASKCAAHWYTV 170 (339)
T ss_dssp GGGTTSCSSBCTT-----SCC-----------------------------------------CCCSHHHHHHHHHHHHHH
T ss_pred eecccCCCCCCCC-----CCC-----------------------------------------CCcchhhHHHHHHHHHHH
Confidence 9887765444443 222 345789999999999998
Q ss_pred Hh--ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhc-CCceeeecCCCeeeeeeehHHHHHHHHHHHHHhh
Q 008324 244 QS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQ-GNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHA 320 (570)
Q Consensus 244 ~~--~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~-G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~ 320 (570)
.+ ..+++++++||+.||||...+ .+.. ......+..... +....+.+++.+.+|++||+|+|+++..++...
T Consensus 171 ~~~~~~~~~~~ilR~~~vyGp~~~~--~~~~--~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~~~~~~- 245 (339)
T d1n7ha_ 171 NYREAYGLFACNGILFNHESPRRGE--NFVT--RKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQE- 245 (339)
T ss_dssp HHHHHHCCEEEEEEECCEECTTSCT--TSHH--HHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSS-
T ss_pred HHHHHhCCCEEEEEEccccCCCCCC--CCCc--chhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHHHHHhcC-
Confidence 76 458999999999999986532 1111 112222233333 334456788999999999999999999888522
Q ss_pred CCCCCCceEEecCCCCCcccHHHHHHHHhhhcccC
Q 008324 321 KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 321 ~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~ 355 (570)
. ...++++.+ .+.++.++++.+.+.++..
T Consensus 246 -~---~~~~~~~~~--~~~s~~~~~~~~~~~~~~~ 274 (339)
T d1n7ha_ 246 -K---PDDYVVATE--EGHTVEEFLDVSFGYLGLN 274 (339)
T ss_dssp -S---CCEEEECCS--CEEEHHHHHHHHHHHTTCC
T ss_pred -C---CCccccccc--cccccchhhhhhhhhhhcc
Confidence 1 345666666 7899999999999988764
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.94 E-value=1.4e-25 Score=228.43 Aligned_cols=272 Identities=17% Similarity=0.207 Sum_probs=182.8
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
+|||||||||||++|+++|+++| ++|+++.|-.+.. ..+++.. +. ...++.++.||
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g---~~V~~id~~~~~~-~~~~~~~----------~~----------~~~~~~~i~~D 57 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQG---IDLIVFDNLSRKG-ATDNLHW----------LS----------SLGNFEFVHGD 57 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSTT-HHHHHHH----------HH----------TTCCCEEEECC
T ss_pred EEEEECCCcHHHHHHHHHHHHCc---CEEEEEECCCccc-chhHHHH----------hh----------ccCCcEEEEcc
Confidence 79999999999999999999998 5677776433222 1222220 00 13688999999
Q ss_pred CCCCCCCCCchhhHHHHhCC--ccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEec-ceeec
Q 008324 94 ISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST-AYVAG 167 (570)
Q Consensus 94 l~~~~lgls~~~~~~~l~~~--vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vST-a~v~~ 167 (570)
++ +.+....++++ +|+|||+||.+... ++....+++|+.||.+|+++|.+. +++++|++|| +.+++
T Consensus 58 i~-------~~~~l~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~i~~sS~~~~~~ 129 (338)
T d1orra_ 58 IR-------NKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIYSSTNKVYG 129 (338)
T ss_dssp TT-------CHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEEGGGGT
T ss_pred cC-------CHHHHHHHHHhcCCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhcc-cccccccccccccccc
Confidence 99 44445566654 69999999987653 345677899999999999999998 5555555555 44444
Q ss_pred CCCcc-cccc--cCCC-CCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHH
Q 008324 168 ERTGL-ILEN--PLDG-ASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (570)
Q Consensus 168 ~~~g~-i~E~--~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~ 243 (570)
..... ..+. ..+. ..+... .......+.+.|+.+|..+|.++.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~y~~~k~~~e~~~~ 176 (338)
T d1orra_ 130 DLEQYKYNETETRYTCVDKPNGY---------------------------------DESTQLDFHSPYGCSKGAADQYML 176 (338)
T ss_dssp TCTTSCEEECSSCEEETTCTTCB---------------------------------CTTSCCCCCHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccCc---------------------------------ccCCccccccccccccchhhhhhh
Confidence 32211 1111 0000 000000 000111345789999999999987
Q ss_pred Hh--ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHH-----HhcCCceeeecCCCeeeeeeehHHHHHHHHHHH
Q 008324 244 QS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVA-----SAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (570)
Q Consensus 244 ~~--~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~-----~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~ 316 (570)
.+ ..+....++|++.++++...+... . .....++.. .+.|....+++++...+|++||+|+|++++.++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~v~D~~~~~~~~l 252 (338)
T d1orra_ 177 DYARIFGLNTVVFRHSSMYGGRQFATYD--Q--GWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTAL 252 (338)
T ss_dssp HHHHHHCCEEEEEEECCEECTTCCCBTT--B--CHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHH
T ss_pred hhhhccCcccccccccceeecccccccc--c--cccchhhHHHHHHHhccCCceEEeCCCceeEeeecccchhhHHHHHH
Confidence 76 458899999999999876532111 1 111122222 234566678899999999999999999999988
Q ss_pred HHhhCCCCCCceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 317 VAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 317 ~~~~~~~~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
...... .+++||+..+..+++++.|+++.+.+..+..+
T Consensus 253 ~~~~~~--~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~ 290 (338)
T d1orra_ 253 ANVSKI--RGNAFNIGGTIVNSLSLLELFKLLEDYCNIDM 290 (338)
T ss_dssp HTHHHH--TTCEEEESSCGGGEEEHHHHHHHHHHHHTCCC
T ss_pred hccccc--cCccccccccccccccHHHHHHHHHHHHCCCc
Confidence 643322 26799997665588999999999999887654
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.93 E-value=8.2e-25 Score=224.97 Aligned_cols=267 Identities=13% Similarity=0.156 Sum_probs=189.7
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
.+||+||+|||||||||||++|+++|++.| +.|+++.|.+....... +..+ ..++
T Consensus 3 ~~~~~~KkILVTG~tGfIGs~lv~~Ll~~g---~~V~~~~r~~~~~~~~~------------~~~~----------~~~~ 57 (356)
T d1rkxa_ 3 NSFWQGKRVFVTGHTGFKGGWLSLWLQTMG---ATVKGYSLTAPTVPSLF------------ETAR----------VADG 57 (356)
T ss_dssp HHHHTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCSSSSCHH------------HHTT----------TTTT
T ss_pred hhhhCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCCCccHHHH------------hhhh----------cccC
Confidence 479999999999999999999999999999 67889999775543211 1010 1367
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCcc---ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEe
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f~---~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vS 161 (570)
++++.||++ +.+...++.+ .+|+|+|+||...-. +.......+|+.|+.+++++|++.+....+++.|
T Consensus 58 i~~~~~Dl~-------d~~~l~~~~~~~~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s 130 (356)
T d1rkxa_ 58 MQSEIGDIR-------DQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNIT 130 (356)
T ss_dssp SEEEECCTT-------CHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEEC
T ss_pred CeEEEeecc-------ChHhhhhhhhhchhhhhhhhhccccccccccCCccccccccccchhhhhhhhcccccccccccc
Confidence 999999999 4554445554 579999999986432 4566778999999999999999986677778887
Q ss_pred cceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHH
Q 008324 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (570)
Q Consensus 162 Ta~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~l 241 (570)
|++++...... .+.+++.+. .+.+.|+.+|..+|..
T Consensus 131 ~~~~~~~~~~~---~~~~~~~~~-----------------------------------------~p~~~y~~~k~~~e~~ 166 (356)
T d1rkxa_ 131 SDKCYDNKEWI---WGYRENEAM-----------------------------------------GGYDPYSNSKGCAELV 166 (356)
T ss_dssp CGGGBCCCCSS---SCBCTTSCB-----------------------------------------CCSSHHHHHHHHHHHH
T ss_pred ccccccccccc---ccccccccc-----------------------------------------CCCCccccccccchhh
Confidence 77666553321 111111111 3457899999999988
Q ss_pred HHHh-----------ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHH
Q 008324 242 MQQS-----------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (570)
Q Consensus 242 v~~~-----------~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ 310 (570)
+..+ ..+++++++||+.|||+.+.+. ......+.....+......++++...++++|+|+|.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~-------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~ 239 (356)
T d1rkxa_ 167 TSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL-------DRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLS 239 (356)
T ss_dssp HHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS-------SCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHH
T ss_pred hhHHhhhcccchhccccCceEEeccCCCeeCCCcchh-------hHHHHHHHHHHhCCCceEEeeccccccccccccccc
Confidence 8653 2367899999999999865221 122222333344555567888999999999999999
Q ss_pred HHHHHHHHhhCCC-CCCceEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 311 AMIVAMVAHAKQP-SDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 311 aii~a~~~~~~~~-~~~~iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
|++.++....... ......+...+....+++.++++.+.+.++..+
T Consensus 240 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 286 (356)
T d1rkxa_ 240 GYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGA 286 (356)
T ss_dssp HHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTC
T ss_pred hhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCc
Confidence 9998887543221 112334444333378999999999999988654
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=4.9e-25 Score=213.98 Aligned_cols=211 Identities=17% Similarity=0.130 Sum_probs=155.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+|||||||||++|+++|++.+ .+++|++++|++...... ...++..
T Consensus 12 m~~k~IlItGaTG~iG~~l~~~Ll~~g-~~~~v~~~~R~~~~~~~~---------------------------~~~~i~~ 63 (232)
T d2bkaa1 12 MQNKSVFILGASGETGRVLLKEILEQG-LFSKVTLIGRRKLTFDEE---------------------------AYKNVNQ 63 (232)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHT-CCSEEEEEESSCCCCCSG---------------------------GGGGCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCC-CCCEEEEEecChhhhccc---------------------------ccceeee
Confidence 467899999999999999999999987 556999999976432210 1256778
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCC
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~ 169 (570)
+.+|+.+ .+.....++++|+|||+|+......+.....++|+.++.+++++|++. ++++|||+||..++..
T Consensus 64 ~~~D~~~-------~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~fi~~Ss~~~~~~- 134 (232)
T d2bkaa1 64 EVVDFEK-------LDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGADKS- 134 (232)
T ss_dssp EECCGGG-------GGGGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTT-
T ss_pred eeecccc-------cccccccccccccccccccccccccchhhhhhhcccccceeeeccccc-CccccccCCccccccC-
Confidence 8899884 333457778999999999987666667778899999999999999997 8999999999865432
Q ss_pred CcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccCC
Q 008324 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENL 249 (570)
Q Consensus 170 ~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~l 249 (570)
.++.|+.+|..+|..+.+. ++
T Consensus 135 ---------------------------------------------------------~~~~Y~~~K~~~E~~l~~~--~~ 155 (232)
T d2bkaa1 135 ---------------------------------------------------------SNFLYLQVKGEVEAKVEEL--KF 155 (232)
T ss_dssp ---------------------------------------------------------CSSHHHHHHHHHHHHHHTT--CC
T ss_pred ---------------------------------------------------------ccchhHHHHHHhhhccccc--cc
Confidence 2467999999999999874 45
Q ss_pred c-EEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCce
Q 008324 250 S-LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANI 328 (570)
Q Consensus 250 p-~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~i 328 (570)
+ ++|+|||+|+|+..+. +....++.....+. ..+......||++|+|++++.++... ...++
T Consensus 156 ~~~~IlRP~~i~G~~~~~--------~~~~~~~~~~~~~~-----~~~~~~~~~I~~~dvA~a~i~~~~~~----~~~~~ 218 (232)
T d2bkaa1 156 DRYSVFRPGVLLCDRQES--------RPGEWLVRKFFGSL-----PDSWASGHSVPVVTVVRAMLNNVVRP----RDKQM 218 (232)
T ss_dssp SEEEEEECCEEECTTGGG--------SHHHHHHHHHHCSC-----CTTGGGGTEEEHHHHHHHHHHHHTSC----CCSSE
T ss_pred cceEEecCceeecCCCcC--------cHHHHHHHHHhhcc-----CCcccCCCeEEHHHHHHHHHHHHhcC----ccCCe
Confidence 4 8999999999976531 11112222222221 12223344699999999999887422 12456
Q ss_pred EEecC
Q 008324 329 YHVGS 333 (570)
Q Consensus 329 yni~s 333 (570)
|.+++
T Consensus 219 ~i~~~ 223 (232)
T d2bkaa1 219 ELLEN 223 (232)
T ss_dssp EEEEH
T ss_pred EEEcH
Confidence 76654
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.90 E-value=1.6e-22 Score=200.39 Aligned_cols=224 Identities=17% Similarity=0.198 Sum_probs=168.7
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|+..| ++|+.+.|.+ +
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g---~~Vi~~~r~~------------------------------------------~ 36 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKN---VEVIPTDVQD------------------------------------------L 36 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSS---EEEEEECTTT------------------------------------------C
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC---CEEEEeechh------------------------------------------c
Confidence 689999999999999999999988 5677776532 3
Q ss_pred cCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeec
Q 008324 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f---~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~ 167 (570)
|+. +.+..+.+++ ++|+|||+||.... ....+.....|+.++..+.+.++. ....++++||..+++
T Consensus 37 D~~-------d~~~~~~~l~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~~~~~~ss~~v~~ 107 (281)
T d1vl0a_ 37 DIT-------NVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYS--VGAEIVQISTDYVFD 107 (281)
T ss_dssp CTT-------CHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHH--HTCEEEEEEEGGGSC
T ss_pred cCC-------CHHHHHHHHHHcCCCEEEeeccccccccccccchhhccccccccccccccccc--ccccccccccceeee
Confidence 666 3444445554 57999999998753 245567788999999999998887 446788888888877
Q ss_pred CCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcc
Q 008324 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE 247 (570)
Q Consensus 168 ~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~ 247 (570)
.... .++.+.++. .+.+.|..+|..+|..+.+ .
T Consensus 108 ~~~~----~~~~e~~~~-----------------------------------------~~~~~~~~~k~~~e~~~~~--~ 140 (281)
T d1vl0a_ 108 GEAK----EPITEFDEV-----------------------------------------NPQSAYGKTKLEGENFVKA--L 140 (281)
T ss_dssp SCCS----SCBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHH--H
T ss_pred cccc----ccccccccc-----------------------------------------cchhhhhhhhhHHHHHHHH--h
Confidence 5431 122211111 3457899999999999987 4
Q ss_pred CCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCc
Q 008324 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (570)
Q Consensus 248 ~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~ 327 (570)
+.+.+|+||+.|||+.. +....++.....+......+ +..+++++++|+|+++..++... . ..
T Consensus 141 ~~~~~i~R~~~vyG~~~----------~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~~~~~~~~~~~~-~----~g 203 (281)
T d1vl0a_ 141 NPKYYIVRTAWLYGDGN----------NFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK-N----YG 203 (281)
T ss_dssp CSSEEEEEECSEESSSS----------CHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT-C----CE
T ss_pred CCCccccceeEEeCCCc----------ccccchhhhhccCCceeecC--Cceeccchhhhhhhhhhhhhhhc-c----cC
Confidence 67899999999999754 22334555555565555554 57899999999999999998632 1 35
Q ss_pred eEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 328 IYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 328 iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
+||++++ +++|+.|+++.+.+.+|...
T Consensus 204 ~~~~~~~--~~~s~~e~~~~i~~~~g~~~ 230 (281)
T d1vl0a_ 204 TFHCTCK--GICSWYDFAVEIFRLTGIDV 230 (281)
T ss_dssp EEECCCB--SCEEHHHHHHHHHHHHCCCC
T ss_pred ceeEeCC--CccchHHHHHHHHHHhCCCc
Confidence 8999998 89999999999999998764
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.88 E-value=7e-22 Score=197.51 Aligned_cols=248 Identities=15% Similarity=0.186 Sum_probs=153.3
Q ss_pred EEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE-ecc
Q 008324 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV-PGD 93 (570)
Q Consensus 15 VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v-~gD 93 (570)
|||||||||||++|+++|++.|. +.|+++.+-.++... .++. + ....... ..|
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~--~~V~~~d~~~~~~~~-~~~~-------------~----------~~~~~~~~~~~ 55 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGI--TDILVVDNLKDGTKF-VNLV-------------D----------LNIADYMDKED 55 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTC--CCEEEEECCSSGGGG-HHHH-------------T----------SCCSEEEEHHH
T ss_pred EEEecCccHHHHHHHHHHHhCCC--CeEEEEECCCCcchh-hccc-------------c----------cchhhhccchH
Confidence 89999999999999999999884 346665432222111 1111 0 0111111 111
Q ss_pred CCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCCc-
Q 008324 94 ISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG- 171 (570)
Q Consensus 94 l~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~g- 171 (570)
+. +..........+++|+|+||.... ..+.+.....|+.++.+++++++.. +++ +++.||..+++....
T Consensus 56 ~~-------~~~~~~~~~~~~~~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~i~-~v~~ss~~~~~~~~~~ 126 (307)
T d1eq2a_ 56 FL-------IQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EIP-FLYASSAATYGGRTSD 126 (307)
T ss_dssp HH-------HHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TCC-EEEEEEGGGGTTCCSC
T ss_pred HH-------HHHhhhhcccchhhhhhhcccccccccccccccccccccccccccccccc-ccc-cccccccccccccccc
Confidence 11 111101122458999999997653 3455667888999999999999985 665 667666666554321
Q ss_pred ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--ccCC
Q 008324 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KENL 249 (570)
Q Consensus 172 ~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~--~~~l 249 (570)
..+|... ..+.+.|+.+|..+|.++.++ ..++
T Consensus 127 ~~~~~~~----------------------------------------------~~~~~~Y~~~K~~~e~~~~~~~~~~~~ 160 (307)
T d1eq2a_ 127 FIESREY----------------------------------------------EKPLNVYGYSKFLFDEYVRQILPEANS 160 (307)
T ss_dssp BCSSGGG----------------------------------------------CCCSSHHHHHHHHHHHHHHHHGGGCSS
T ss_pred ccccccc----------------------------------------------cccccccccccchhhhhcccccccccc
Confidence 1111110 145689999999999999987 5689
Q ss_pred cEEEEecCceecCCCCCCCccccCccc-hHHHHHHHhcCCcee-eecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCc
Q 008324 250 SLVIIRPTVVSGTYKEPFPGWVEDLKT-INTLFVASAQGNLRC-LVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (570)
Q Consensus 250 p~~IvRPsiV~g~~~ep~~gw~~~~~~-~~~~i~~~~~G~~~~-~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~ 327 (570)
+++++||+.|||+...+- ..... ...++..+..|.... +.+++...+++++++|++.++..++... ...
T Consensus 161 ~~~~~r~~~vyGp~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~-----~~~ 231 (307)
T d1eq2a_ 161 QIVGFRYFNVYGPREGHK----GSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG-----VSG 231 (307)
T ss_dssp CEEEEEECEEESSSCGGG----GGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHC-----CCE
T ss_pred ccccccceeEeecccccc----ccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhc-----ccc
Confidence 999999999999865321 11122 223444555554433 4578888999999999999999887632 146
Q ss_pred eEEecCCCCCcccHHHHHHHHhhhccc
Q 008324 328 IYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 328 iyni~s~~~~pit~~~l~~~i~~~~~~ 354 (570)
+||++++ ++.++.++++.+.+..++
T Consensus 232 ~~~~~~~--~~~si~~i~~~i~~~~~~ 256 (307)
T d1eq2a_ 232 IFNLGTG--RAESFQAVADATLAYHKK 256 (307)
T ss_dssp EEEESCS--CCBCHHHHHHHC------
T ss_pred ccccccc--cchhHHHHHHHHHHhcCC
Confidence 8999999 899999999998776543
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.87 E-value=1.3e-21 Score=195.97 Aligned_cols=241 Identities=10% Similarity=0.096 Sum_probs=174.0
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
-++|||||||||||++|+++|+++| ++|++++|+.........-. ... ....+++++.
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~G---~~V~~~~R~~~~~~~~~~~~--------~~~-----------~~~~~v~~v~ 60 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISLG---HPTYVLFRPEVVSNIDKVQM--------LLY-----------FKQLGAKLIE 60 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT---CCEEEECCSCCSSCHHHHHH--------HHH-----------HHTTTCEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEECCCcccchhHHHH--------Hhh-----------hccCCcEEEE
Confidence 3579999999999999999999998 67789999876654332111 000 0136789999
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCCc
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~g 171 (570)
+|+. +.+.....+.+.+++||+++.... ..|..++.+++++|.+. +..++++.||..++.....
T Consensus 61 ~d~~-------d~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~a~~~-~~~~~v~~Ss~g~~~~~~~ 124 (312)
T d1qyda_ 61 ASLD-------DHQRLVDALKQVDVVISALAGGVL--------SHHILEQLKLVEAIKEA-GNIKRFLPSEFGMDPDIME 124 (312)
T ss_dssp CCSS-------CHHHHHHHHTTCSEEEECCCCSSS--------STTTTTHHHHHHHHHHS-CCCSEEECSCCSSCTTSCC
T ss_pred eecc-------cchhhhhhccCcchhhhhhhhccc--------ccchhhhhHHHHHHHHh-cCCcEEEEeeccccCCCcc
Confidence 9999 455556888999999999986432 34666788899999987 5566777887655433210
Q ss_pred ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccCCcE
Q 008324 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSL 251 (570)
Q Consensus 172 ~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp~ 251 (570)
.+ ..+...|..+|..++..... .++++
T Consensus 125 ----------~~-----------------------------------------~~~~~~~~~~~~~~~~~~~~--~~~~~ 151 (312)
T d1qyda_ 125 ----------HA-----------------------------------------LQPGSITFIDKRKVRRAIEA--ASIPY 151 (312)
T ss_dssp ----------CC-----------------------------------------CSSTTHHHHHHHHHHHHHHH--TTCCB
T ss_pred ----------cc-----------------------------------------cchhhhhhHHHHHHHHhhcc--cccce
Confidence 00 03356788888888887765 68999
Q ss_pred EEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEe
Q 008324 252 VIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHV 331 (570)
Q Consensus 252 ~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni 331 (570)
+++||+.++|+.......+..... ..+....++++++..+++|+++|+|++++.++..... ....+|++
T Consensus 152 ~i~r~~~~~g~~~~~~~~~~~~~~---------~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~--~~~~~~~~ 220 (312)
T d1qyda_ 152 TYVSSNMFAGYFAGSLAQLDGHMM---------PPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQT--LNKTMYIR 220 (312)
T ss_dssp CEEECCEEHHHHTTTSSCTTCCSS---------CCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGG--SSSEEECC
T ss_pred EEeccceeecCCccchhhHHHHhh---------hcccccccccccccccceeeHHHHHHHHHHHhcCccc--cCceEEEe
Confidence 999999999976654443332211 1234456778899999999999999999998853221 11346778
Q ss_pred cCCCCCcccHHHHHHHHhhhcccCC
Q 008324 332 GSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 332 ~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
+++ +++|+.++++.+.+..++..
T Consensus 221 ~~~--~~~s~~e~~~~~~~~~g~~~ 243 (312)
T d1qyda_ 221 PPM--NILSQKEVIQIWERLSEQNL 243 (312)
T ss_dssp CGG--GEEEHHHHHHHHHHHHTCCC
T ss_pred CCC--cCCCHHHHHHHHHHHHCCCC
Confidence 777 78999999999999988754
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=2.2e-21 Score=184.18 Aligned_cols=189 Identities=13% Similarity=0.097 Sum_probs=144.7
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
..|+|+|||||||+|++++++|++.| ++|.+++|+..... .....+++++
T Consensus 2 ~~kkIlV~GatG~iG~~v~~~Ll~~g---~~V~~~~R~~~~~~---------------------------~~~~~~~~~~ 51 (205)
T d1hdoa_ 2 AVKKIAIFGATGQTGLTTLAQAVQAG---YEVTVLVRDSSRLP---------------------------SEGPRPAHVV 51 (205)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCGGGSC---------------------------SSSCCCSEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCc---CEEEEEEcChhhcc---------------------------cccccccccc
Confidence 46899999999999999999999998 68899999754321 1113678999
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCC
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~ 170 (570)
.||++ +.+.+..+++++|+|||++|.....+. .+++..+++++++++++. ++++||++||+.++.+..
T Consensus 52 ~gD~~-------d~~~l~~al~~~d~vi~~~g~~~~~~~----~~~~~~~~~~l~~aa~~~-~v~r~i~~ss~~~~~~~~ 119 (205)
T d1hdoa_ 52 VGDVL-------QAADVDKTVAGQDAVIVLLGTRNDLSP----TTVMSEGARNIVAAMKAH-GVDKVVACTSAFLLWDPT 119 (205)
T ss_dssp ESCTT-------SHHHHHHHHTTCSEEEECCCCTTCCSC----CCHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCTT
T ss_pred ccccc-------chhhHHHHhcCCCEEEEEeccCCchhh----hhhhHHHHHHHHHHHHhc-CCCeEEEEeeeeccCCCc
Confidence 99999 455566888999999999987543332 245778999999999997 999999999987765432
Q ss_pred cccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccCCc
Q 008324 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLS 250 (570)
Q Consensus 171 g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp 250 (570)
. .+ .....|...|..+|+++++ .+++
T Consensus 120 ~------~~----------------------------------------------~~~~~~~~~~~~~e~~l~~--~~~~ 145 (205)
T d1hdoa_ 120 K------VP----------------------------------------------PRLQAVTDDHIRMHKVLRE--SGLK 145 (205)
T ss_dssp C------SC----------------------------------------------GGGHHHHHHHHHHHHHHHH--TCSE
T ss_pred c------cc----------------------------------------------ccccccchHHHHHHHHHHh--cCCc
Confidence 1 00 1123588889999999887 7899
Q ss_pred EEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHH
Q 008324 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (570)
Q Consensus 251 ~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~ 317 (570)
++|+||+.+++... . |.. .+..++.....+|+++|+|++++.++.
T Consensus 146 ~tiirp~~~~~~~~---~------------------~~~-~~~~~~~~~~~~i~~~DvA~~~~~~l~ 190 (205)
T d1hdoa_ 146 YVAVMPPHIGDQPL---T------------------GAY-TVTLDGRGPSRVISKHDLGHFMLRCLT 190 (205)
T ss_dssp EEEECCSEEECCCC---C------------------SCC-EEESSSCSSCSEEEHHHHHHHHHHTTS
T ss_pred eEEEecceecCCCC---c------------------ccE-EEeeCCCCCCCcCCHHHHHHHHHHHhC
Confidence 99999999886422 1 111 334456667788999999999998885
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.86 E-value=1.6e-21 Score=194.08 Aligned_cols=236 Identities=13% Similarity=0.159 Sum_probs=167.3
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
-|+|||||||||||++|++.|+++| ++|++++|........++.. .+.. ....++.++.
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G---~~V~~l~R~~~~~~~~~~~~----------~~~~--------~~~~~~~~~~ 61 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLG---HPTFLLVRESTASSNSEKAQ----------LLES--------FKASGANIVH 61 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT---CCEEEECCCCCTTTTHHHHH----------HHHH--------HHTTTCEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC---CeEEEEECCCccccchhHHH----------HHHh--------hccCCcEEEE
Confidence 3789999999999999999999999 57799999876543332221 0110 1135788999
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCCc
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~g 171 (570)
+|+. +.+.....+++++.|+|+++.. ++.++.+++++++.. +.+.+++.|+.........
T Consensus 62 ~d~~-------~~~~~~~~~~~~~~vi~~~~~~------------~~~~~~~~~~a~~~~-~~~~~~~~s~~~~~~~~~~ 121 (307)
T d1qyca_ 62 GSID-------DHASLVEAVKNVDVVISTVGSL------------QIESQVNIIKAIKEV-GTVKRFFPSEFGNDVDNVH 121 (307)
T ss_dssp CCTT-------CHHHHHHHHHTCSEEEECCCGG------------GSGGGHHHHHHHHHH-CCCSEEECSCCSSCTTSCC
T ss_pred eecc-------cchhhhhhhhhceeeeeccccc------------ccchhhHHHHHHHHh-ccccceeeecccccccccc
Confidence 9999 4444557778899999998763 334556778888886 7778888887544332110
Q ss_pred ccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccCCcE
Q 008324 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSL 251 (570)
Q Consensus 172 ~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp~ 251 (570)
.. .....|...+..+|..+.+ .++++
T Consensus 122 -----------~~-----------------------------------------~~~~~~~~~~~~~~~~~~~--~~~~~ 147 (307)
T d1qyca_ 122 -----------AV-----------------------------------------EPAKSVFEVKAKVRRAIEA--EGIPY 147 (307)
T ss_dssp -----------CC-----------------------------------------TTHHHHHHHHHHHHHHHHH--HTCCB
T ss_pred -----------cc-----------------------------------------ccccccccccccccchhhc--cCCCc
Confidence 00 1123466667777777766 68899
Q ss_pred EEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEe
Q 008324 252 VIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHV 331 (570)
Q Consensus 252 ~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni 331 (570)
+|+||+.++|+...++..+.. ...++....++++++...++|+++|+|++++.++...... ...+|++
T Consensus 148 ~i~r~~~v~g~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~--~~~~~~~ 215 (307)
T d1qyca_ 148 TYVSSNCFAGYFLRSLAQAGL----------TAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTL--NKTLYLR 215 (307)
T ss_dssp EEEECCEEHHHHTTTTTCTTC----------SSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGT--TEEEECC
T ss_pred eecccceecCCCccchhhhhh----------hhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhc--CceeEEe
Confidence 999999999976544333222 2234455577888999999999999999999887532221 1346777
Q ss_pred cCCCCCcccHHHHHHHHhhhcccCC
Q 008324 332 GSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 332 ~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
+++ +.+|+.|+++.+.+..|..+
T Consensus 216 ~~~--~~~s~~ei~~~~~~~~G~~~ 238 (307)
T d1qyca_ 216 LPA--NTLSLNELVALWEKKIDKTL 238 (307)
T ss_dssp CGG--GEEEHHHHHHHHHHHTTSCC
T ss_pred CCC--CccCHHHHHHHHHHHHCCCC
Confidence 777 88999999999999998754
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.85 E-value=2.9e-21 Score=185.76 Aligned_cols=229 Identities=16% Similarity=0.111 Sum_probs=156.3
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|||||||||||++++++|++.|++| .|+.+.|++... . + ...++.++.+
T Consensus 4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v-~v~~~~R~~~~~------~-~---------------------~~~~~~~~~~ 54 (252)
T d2q46a1 4 PTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGK------E-K---------------------IGGEADVFIG 54 (252)
T ss_dssp CEEEEESTTSTTHHHHHHHHHHTTTTC-EEEEEESCHHHH------H-H---------------------TTCCTTEEEC
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCcE-EEEEEcCCHHHH------H-h---------------------ccCCcEEEEe
Confidence 689999999999999999999999765 677888865321 0 0 1357789999
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc----------------ccHHHHHHHhHHHHHHHHHHHHHccCceE
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD----------------ERYDVAFGINTLGVIHLVNFAKKCVKLKV 156 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~----------------~~~~~~~~~Nv~gt~~ll~la~~~~~l~~ 156 (570)
|++ +.+....+++++|+|||+|+..... ........+|+.|+.+++..+... ..+.
T Consensus 55 d~~-------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 126 (252)
T d2q46a1 55 DIT-------DADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-GVKH 126 (252)
T ss_dssp CTT-------SHHHHHHHHTTCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-TCSE
T ss_pred eec-------cccccccccccceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc-cccc
Confidence 999 4555568889999999999865311 123345688999999999999886 7778
Q ss_pred EEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHH
Q 008324 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (570)
Q Consensus 157 ~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+.+.|+......... .. ......|...+.
T Consensus 127 ~~~~s~~~~~~~~~~------~~---------------------------------------------~~~~~~~~~~~~ 155 (252)
T d2q46a1 127 IVVVGSMGGTNPDHP------LN---------------------------------------------KLGNGNILVWKR 155 (252)
T ss_dssp EEEEEETTTTCTTCG------GG---------------------------------------------GGGGCCHHHHHH
T ss_pred cccccccccCCCCcc------cc---------------------------------------------cccccchhhhhh
Confidence 888877544332110 00 012345777777
Q ss_pred HHHHHHHHhccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHH
Q 008324 237 MGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (570)
Q Consensus 237 ~aE~lv~~~~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~ 316 (570)
+.+....+ .+++++|+||+.|+|+.....+.+..... . ......++||+||||++++.++
T Consensus 156 ~~~~~~~~--~~~~~~ilRp~~v~g~~~~~~~~~~~~~~---------------~---~~~~~~~~i~~~Dva~a~~~~l 215 (252)
T d2q46a1 156 KAEQYLAD--SGTPYTIIRAGGLLDKEGGVRELLVGKDD---------------E---LLQTDTKTVPRADVAEVCIQAL 215 (252)
T ss_dssp HHHHHHHH--SSSCEEEEEECEEECSCTTSSCEEEESTT---------------G---GGGSSCCEEEHHHHHHHHHHHT
T ss_pred hhhhhhhc--ccccceeecceEEECCCcchhhhhhccCc---------------c---cccCCCCeEEHHHHHHHHHHHh
Confidence 77776665 68999999999999986543322221100 0 0122346899999999999988
Q ss_pred HHhhCCCCCCceEEecCCC-CCcccHHHHHHHHhhhc
Q 008324 317 VAHAKQPSDANIYHVGSSL-RNPVTLVSILDYGFVYF 352 (570)
Q Consensus 317 ~~~~~~~~~~~iyni~s~~-~~pit~~~l~~~i~~~~ 352 (570)
.... ..+++||++++. ....++.++.+++.+..
T Consensus 216 ~~~~---~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~ 249 (252)
T d2q46a1 216 LFEE---AKNKAFDLGSKPEGTSTPTKDFKALFSQVT 249 (252)
T ss_dssp TCGG---GTTEEEEEEECCTTTSCCCCCHHHHHTTCC
T ss_pred CCcc---ccCcEEEEeeCCCCCChhHHHHHHHHHHHH
Confidence 6322 236899998752 13455667766665443
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.85 E-value=1.2e-20 Score=187.89 Aligned_cols=233 Identities=21% Similarity=0.172 Sum_probs=158.6
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|++.|++.| + ++.+.+..+ .+.+
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g---~-~v~~~~~~~--------------------------------------~~~~ 38 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVG---N-LIALDVHSK--------------------------------------EFCG 38 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTS---E-EEEECTTCS--------------------------------------SSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC---C-EEEEECCCc--------------------------------------cccC
Confidence 689999999999999999999876 3 344443221 1247
Q ss_pred cCCCCCCCCCchhhHHHHhC--CccEEEEcCccCCc---cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeec
Q 008324 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiViH~AA~v~f---~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~ 167 (570)
|++ +.+..+.+++ ++|+|||+||.+.. ..........|+.++.+++++|++. + .+++++||+.+++
T Consensus 39 Dl~-------~~~~~~~~i~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~~~~ss~~~~~ 109 (298)
T d1n2sa_ 39 DFS-------NPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET-G-AWVVHYSTDYVFP 109 (298)
T ss_dssp CTT-------CHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-T-CEEEEEEEGGGSC
T ss_pred cCC-------CHHHHHHHHHHcCCCEEEEecccccccccccCccccccccccccccchhhhhcc-c-ccccccccccccc
Confidence 887 4444556665 46999999997653 3556677899999999999999885 4 5688999988876
Q ss_pred CCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcc
Q 008324 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE 247 (570)
Q Consensus 168 ~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~ 247 (570)
...+ .++.|..+. .+.+.|+.+|..+|..+.++..
T Consensus 110 ~~~~----~~~~E~~~~-----------------------------------------~p~~~y~~~k~~~e~~~~~~~~ 144 (298)
T d1n2sa_ 110 GTGD----IPWQETDAT-----------------------------------------SPLNVYGKTKLAGEKALQDNCP 144 (298)
T ss_dssp CCTT----CCBCTTSCC-----------------------------------------CCSSHHHHHHHHHHHHHHHHCS
T ss_pred CCCC----CCCcccccc-----------------------------------------CCCchHhhhhhhhhhhHHhhhc
Confidence 5432 222222221 3457899999999999987533
Q ss_pred CCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCc
Q 008324 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (570)
Q Consensus 248 ~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~ 327 (570)
...++|++..++.... +....+...+..+..... .++...++++++|+++++..++...........
T Consensus 145 --~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~ 211 (298)
T d1n2sa_ 145 --KHLIFRTSWVYAGKGN---------NFAKTMLRLAKERQTLSV--INDQYGAPTGAELLADCTAHAIRVALNKPEVAG 211 (298)
T ss_dssp --SEEEEEECSEECSSSC---------CHHHHHHHHHHHCSEEEE--ECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCE
T ss_pred --ccccccccceeeccCC---------ccchhhhhhhcccceeec--ccceeecccccchHHHHHHHHHhhhhccccccc
Confidence 3456666655543221 112222223333333233 345678999999999998877653322222368
Q ss_pred eEEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 328 IYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 328 iyni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
+||++++ +.+++.++++.+.+..+...
T Consensus 212 ~~n~~~~--~~~~~~~~~~~i~~~~~~~~ 238 (298)
T d1n2sa_ 212 LYHLVAG--GTTTWHDYAALVFDEARKAG 238 (298)
T ss_dssp EEECCCB--SCEEHHHHHHHHHHHHHHHT
T ss_pred cccccCC--CceecHHHHHHHHhhhhccC
Confidence 9999998 88999999999888766543
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.85 E-value=1.5e-21 Score=186.07 Aligned_cols=187 Identities=18% Similarity=0.128 Sum_probs=132.1
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.|+|||||||||||++|+++|++.+. ..+|.++.|++... .+++....
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~-~~~v~~~~r~~~~~-------------------------------~~~~~~~~ 49 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPT-LAKVIAPARKALAE-------------------------------HPRLDNPV 49 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTT-CCEEECCBSSCCCC-------------------------------CTTEECCB
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEEEeCCchhh-------------------------------cccccccc
Confidence 48999999999999999999999874 34778777765322 13444444
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCC
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~ 170 (570)
.|+. +....+...+|+||||+|.... ........+.|+.++.+++++|++. ++++|+|+||+.+++.
T Consensus 50 ~d~~---------~~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~~i~~Ss~~~~~~-- 117 (212)
T d2a35a1 50 GPLA---------ELLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGADAK-- 117 (212)
T ss_dssp SCHH---------HHGGGCCSCCSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTT--
T ss_pred cchh---------hhhhccccchheeeeeeeeeccccccccccccchhhhhhhcccccccc-cccccccccccccccc--
Confidence 4433 2222444568999999987643 2344667899999999999999996 9999999999866532
Q ss_pred cccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccCC-
Q 008324 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENL- 249 (570)
Q Consensus 171 g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~l- 249 (570)
..+.|..+|..+|+.+.+ .++
T Consensus 118 --------------------------------------------------------~~~~y~~~K~~~E~~l~~--~~~~ 139 (212)
T d2a35a1 118 --------------------------------------------------------SSIFYNRVKGELEQALQE--QGWP 139 (212)
T ss_dssp --------------------------------------------------------CSSHHHHHHHHHHHHHTT--SCCS
T ss_pred --------------------------------------------------------cccchhHHHHHHhhhccc--cccc
Confidence 236799999999999876 355
Q ss_pred cEEEEecCceecCCCCCCC-ccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHH
Q 008324 250 SLVIIRPTVVSGTYKEPFP-GWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (570)
Q Consensus 250 p~~IvRPsiV~g~~~ep~~-gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~ 317 (570)
.++|+||++|||+...+.. .++ .....+.++ .....|+++|+|++++.++.
T Consensus 140 ~~~I~Rp~~v~G~~~~~~~~~~~-------------~~~~~~~~~----~~~~~i~v~DvA~ai~~~~~ 191 (212)
T d2a35a1 140 QLTIARPSLLFGPREEFRLAEIL-------------AAPIARILP----GKYHGIEACDLARALWRLAL 191 (212)
T ss_dssp EEEEEECCSEESTTSCEEGGGGT-------------TCCCC--------CHHHHHHHHHHHHHHHHHHT
T ss_pred cceeeCCcceeCCcccccHHHHH-------------HHHHhhccC----CCCcEEEHHHHHHHHHHHHc
Confidence 4899999999998653211 111 111111111 12345999999999998874
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.79 E-value=2.7e-18 Score=175.75 Aligned_cols=235 Identities=12% Similarity=0.029 Sum_probs=164.2
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+.|+|+|||||||||++|+++|+++| ++|++++|+..+.... .+. ..++++.+
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G---~~V~~l~R~~~~~~~~-~~~-----------------------~~~~v~~~ 54 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVG---HHVRAQVHSLKGLIAE-ELQ-----------------------AIPNVTLF 54 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTT---CCEEEEESCSCSHHHH-HHH-----------------------TSTTEEEE
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCC---CeEEEEECCcchhhhh-hhc-----------------------ccCCCEEE
Confidence 35899999999999999999999999 6779999987654221 111 13689999
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEecceeecCCC
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vSTa~v~~~~~ 170 (570)
.||+.+ +.+..+.++.+++++++...... ..|+.++.+++++|++. +++++++.||........
T Consensus 55 ~gD~~d------~~~~~~~a~~~~~~~~~~~~~~~---------~~~~~~~~~~~~aa~~a-gv~~~v~~Ss~~~~~~~~ 118 (350)
T d1xgka_ 55 QGPLLN------NVPLMDTLFEGAHLAFINTTSQA---------GDEIAIGKDLADAAKRA-GTIQHYIYSSMPDHSLYG 118 (350)
T ss_dssp ESCCTT------CHHHHHHHHTTCSEEEECCCSTT---------SCHHHHHHHHHHHHHHH-SCCSEEEEEECCCGGGTS
T ss_pred EeeCCC------cHHHHHHHhcCCceEEeeccccc---------chhhhhhhHHHHHHHHh-CCCceEEEeeccccccCC
Confidence 999995 34556678889999988754321 23667788999999997 788888888864332211
Q ss_pred cccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhccCCc
Q 008324 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLS 250 (570)
Q Consensus 171 g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~~~~lp 250 (570)
. .....|..+|...|..+.+ ..++
T Consensus 119 ~------------------------------------------------------~~~~~~~~~k~~~~~~~~~--~~~~ 142 (350)
T d1xgka_ 119 P------------------------------------------------------WPAVPMWAPKFTVENYVRQ--LGLP 142 (350)
T ss_dssp S------------------------------------------------------CCCCTTTHHHHHHHHHHHT--SSSC
T ss_pred c------------------------------------------------------ccchhhhhhHHHHHHHHHh--hccC
Confidence 0 1234566788888888776 5789
Q ss_pred EEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCce-eeecCCCeeeeeeeh-HHHHHHHHHHHHHhhCCCCCCce
Q 008324 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLR-CLVGETKVIMDVIPV-DMVVNAMIVAMVAHAKQPSDANI 328 (570)
Q Consensus 251 ~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~-~~~~~~~~~~d~VpV-Ddva~aii~a~~~~~~~~~~~~i 328 (570)
++++||+..++....+..+...... ...|... ..+.+++....++++ +|++.++..++.+.... ..+++
T Consensus 143 ~~~vr~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~-~~G~~ 213 (350)
T d1xgka_ 143 STFVYAGIYNNNFTSLPYPLFQMEL--------MPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQK-WNGHR 213 (350)
T ss_dssp EEEEEECEEGGGCBSSSCSSCBEEE--------CTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHH-HTTCE
T ss_pred ceeeeeceeeccccccccccccccc--------cccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhh-cCCeE
Confidence 9999999988754432221111100 1122221 344567777888875 89999998887643211 12678
Q ss_pred EEecCCCCCcccHHHHHHHHhhhcccCC
Q 008324 329 YHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 329 yni~s~~~~pit~~~l~~~i~~~~~~~p 356 (570)
|++++. .+|+.|+++.+.+.+|+..
T Consensus 214 ~~~~g~---~~T~~eia~~l~~~~G~~v 238 (350)
T d1xgka_ 214 IALTFE---TLSPVQVCAAFSRALNRRV 238 (350)
T ss_dssp EEECSE---EECHHHHHHHHHHHHTSCE
T ss_pred EEEeCC---cCCHHHHHHHHHHHHCCcc
Confidence 999864 6999999999999999764
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.63 E-value=4.1e-15 Score=144.19 Aligned_cols=211 Identities=14% Similarity=0.113 Sum_probs=147.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++-||++++++|++.| .+|++..|++.. .+.+. ++. .+++.+
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G---~~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~ 56 (244)
T d1nffa_ 4 LTGKVALVSGGARGMGASHVRAMVAEG---AKVVFGDILDEE---GKAMA-------------AEL--------ADAARY 56 (244)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HHT--------GGGEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHH-------------HHh--------hCcceE
Confidence 689999999999999999999999999 678888886422 11211 111 256788
Q ss_pred EeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHH-Hcc--
Q 008324 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAK-KCV-- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~-~~~-- 152 (570)
+.+|++++ +..+.+ ...+|++||+||.... .+.++..+++|+.|+..+.+.+. .|.
T Consensus 57 ~~~Dv~~~-------~~v~~~~~~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~ 129 (244)
T d1nffa_ 57 VHLDVTQP-------AQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA 129 (244)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeecCCH-------HHHHHHHHHHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhc
Confidence 99999953 333333 2469999999997643 25578889999999999988664 332
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|++||....... +....|+
T Consensus 130 ~~G~Ii~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 153 (244)
T d1nffa_ 130 GRGSIINISSIEGLAGT--------------------------------------------------------VACHGYT 153 (244)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTBHHHH
T ss_pred CcceEEecccccccccc--------------------------------------------------------ccccchh
Confidence 34689999997643221 1135799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.. ..++.+..|-|+.|-.+..+..+.... +. ...-+...+|
T Consensus 154 asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~-----------------~~------pl~R~~~p~d 210 (244)
T d1nffa_ 154 ATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDIF-----------------QT------ALGRAAEPVE 210 (244)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTTCS-----------------CC------SSSSCBCHHH
T ss_pred hHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHHHH-----------------hc------cccCCCCHHH
Confidence 9999999988754 458999999999987755432221111 00 0112456799
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|+++..++.+... --.++++.+.+|
T Consensus 211 iA~~v~fL~s~~s~-~itG~~i~vDGG 236 (244)
T d1nffa_ 211 VSNLVVYLASDESS-YSTGAEFVVDGG 236 (244)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhChhhC-CCcCCEEEECCC
Confidence 99999988753332 223788888776
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.62 E-value=5.1e-15 Score=144.53 Aligned_cols=225 Identities=13% Similarity=0.141 Sum_probs=149.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+||||||++-||+.++++|++.| .+|+++.|........+.+. ...+ ..++.+
T Consensus 3 l~gK~vlITGgs~GIG~~~A~~la~~G---~~vii~~r~~~~~~~~~~~~-------------~~~~-------~~~~~~ 59 (254)
T d1sbya1 3 LTNKNVIFVAALGGIGLDTSRELVKRN---LKNFVILDRVENPTALAELK-------------AINP-------KVNITF 59 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTC---CSEEEEEESSCCHHHHHHHH-------------HHCT-------TSEEEE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCC---CEEEEEECCcccHHHHHHHH-------------hhCC-------CCCEEE
Confidence 689999999999999999999999999 67788888776543332222 1211 357889
Q ss_pred EeccCCCCCCCCC-chhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHH-cc-----CceEEEEEec
Q 008324 90 VPGDISSEDLGLK-DSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKK-CV-----KLKVFVHVST 162 (570)
Q Consensus 90 v~gDl~~~~lgls-~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~-~~-----~l~~~V~vST 162 (570)
+..|++.+.-.+. ..+.......++|++||+||... ++.++..+++|+.|+.++.+++.. |. ...++|.+||
T Consensus 60 ~~~d~~~~~~~~~~~~~~~~~~~g~iDilvnnAG~~~-~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS 138 (254)
T d1sbya1 60 HTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICS 138 (254)
T ss_dssp EECCTTSCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred EEeecCCCHHHHHHHHHHHHHHcCCCCEEEeCCCCCC-HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEec
Confidence 9999985311000 01111122356999999999754 577999999999999999887765 31 2357899988
Q ss_pred ceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHHHH
Q 008324 163 AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (570)
Q Consensus 163 a~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv 242 (570)
....... .....|+.||+....+.
T Consensus 139 ~~~~~~~--------------------------------------------------------~~~~~Y~asKaal~~~t 162 (254)
T d1sbya1 139 VTGFNAI--------------------------------------------------------HQVPVYSASKAAVVSFT 162 (254)
T ss_dssp GGGTSCC--------------------------------------------------------TTSHHHHHHHHHHHHHH
T ss_pred hhhccCC--------------------------------------------------------CCCHHHHHHHHHHHHHH
Confidence 7543211 12357999999888887
Q ss_pred HHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHH
Q 008324 243 QQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (570)
Q Consensus 243 ~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~ 317 (570)
+.. ..++.+..|.||.|..+..+-...|.+.. ..+.....+ ....+.+++|++++.++.
T Consensus 163 ~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~----~~~~~~~~~------------~~~~~~e~va~~~~~~~~ 226 (254)
T d1sbya1 163 NSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVE----PRVAELLLS------------HPTQTSEQCGQNFVKAIE 226 (254)
T ss_dssp HHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSC----TTHHHHHTT------------SCCEEHHHHHHHHHHHHH
T ss_pred HHHHhhccccCeEEEEEEeCCCcCccccccccchhHH----HHHHhcccc------------CCCCCHHHHHHHHHHhhh
Confidence 754 45899999999999875322111111110 011111111 123589999999988775
Q ss_pred HhhCCCCCCceEEecCC
Q 008324 318 AHAKQPSDANIYHVGSS 334 (570)
Q Consensus 318 ~~~~~~~~~~iyni~s~ 334 (570)
.. . .|+++.+.+|
T Consensus 227 ~~--~--tG~vi~vdgG 239 (254)
T d1sbya1 227 AN--K--NGAIWKLDLG 239 (254)
T ss_dssp HC--C--TTCEEEEETT
T ss_pred CC--C--CCCEEEECCC
Confidence 32 1 3789988877
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.62 E-value=8.6e-15 Score=142.01 Aligned_cols=218 Identities=18% Similarity=0.204 Sum_probs=148.7
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+++||+++||||+|.||++++++|++.| .+|++..|++.. .+.+ .++ .+++.
T Consensus 4 ~L~GK~~lITGas~GIG~aia~~la~~G---~~V~~~~r~~~~---l~~~-------------~~~---------~~~~~ 55 (244)
T d1pr9a_ 4 FLAGRRVLVTGAGKGIGRGTVQALHATG---ARVVAVSRTQAD---LDSL-------------VRE---------CPGIE 55 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHH-------------HHH---------STTCE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEECCHHH---HHHH-------------HHh---------cCCCe
Confidence 5899999999999999999999999999 678888886422 1111 111 24677
Q ss_pred EEeccCCCCCCCCCchhhHHHHhC---CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c---cCc
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWN---ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C---VKL 154 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~---~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~---~~l 154 (570)
.+.+|+++ ++..+.+++ ++|++||+|+.... .+.++..+++|+.|+..+.+.+.+ + ++-
T Consensus 56 ~~~~Dv~d-------~~~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~ 128 (244)
T d1pr9a_ 56 PVCVDLGD-------WEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVP 128 (244)
T ss_dssp EEECCTTC-------HHHHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC
T ss_pred EEEEeCCC-------HHHHHHHHHHhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCc
Confidence 89999994 444455554 58999999998643 256788899999999999887654 3 234
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|.+||....... +....|+.|
T Consensus 129 g~Ii~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 152 (244)
T d1pr9a_ 129 GAIVNVSSQCSQRAV--------------------------------------------------------TNHSVYCST 152 (244)
T ss_dssp EEEEEECCGGGTSCC--------------------------------------------------------TTBHHHHHH
T ss_pred ceEeecccccccccc--------------------------------------------------------cchhhhhhh
Confidence 689999987643321 123579999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHH
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..+.+.+.. ..++++..|.|+.|..+..+... .+ ........... + ..-+...+|+|
T Consensus 153 Kaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~---~~----~~~~~~~~~~~----p-----l~R~~~peevA 216 (244)
T d1pr9a_ 153 KGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATW---SD----PHKAKTMLNRI----P-----LGKFAEVEHVV 216 (244)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTS---CS----HHHHHHHHTTC----T-----TCSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhc---cC----hHHHHHHHhcC----C-----CCCCcCHHHHH
Confidence 99999888754 45899999999998765332110 11 11111122111 1 11245678999
Q ss_pred HHHHHHHHHhhCCCCCCceEEecCC
Q 008324 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++.++.+.+. --.|++..+.+|
T Consensus 217 ~~v~fL~S~~a~-~itG~~i~vDGG 240 (244)
T d1pr9a_ 217 NAILFLLSDRSG-MTTGSTLPVEGG 240 (244)
T ss_dssp HHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHhCchhC-CcCCcEEEECcc
Confidence 999988754332 223788888776
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.61 E-value=2.4e-15 Score=145.33 Aligned_cols=208 Identities=13% Similarity=0.164 Sum_probs=143.7
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
|+||+++||||++-||++++++|++.| .+|++..|+... .+++..
T Consensus 5 l~gK~~lITGas~GIG~aia~~la~~G---a~V~~~~r~~~~--------------------------------~~~~~~ 49 (237)
T d1uzma1 5 FVSRSVLVTGGNRGIGLAIAQRLAADG---HKVAVTHRGSGA--------------------------------PKGLFG 49 (237)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSSCC--------------------------------CTTSEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCcch--------------------------------hcCceE
Confidence 789999999999999999999999999 788999887643 256778
Q ss_pred EeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--c
Q 008324 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~ 152 (570)
+.+|++++ +..+.+ +..+|++||+||.... .+.++..+++|+.|+..+.+.+.. + .
T Consensus 50 ~~~Dv~~~-------~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~ 122 (237)
T d1uzma1 50 VEVDVTDS-------DAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN 122 (237)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EEEecCCH-------HHHHHHHHHHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc
Confidence 99999954 333333 2369999999997532 356788899999999988876543 2 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|++||....... +....|+
T Consensus 123 ~~g~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 146 (237)
T d1uzma1 123 KFGRMIFIGSVSGLWGI--------------------------------------------------------GNQANYA 146 (237)
T ss_dssp TCEEEEEECCCCC-------------------------------------------------------------CCHHHH
T ss_pred CCCceEEEcchhhccCC--------------------------------------------------------cccHHHH
Confidence 45689999997654321 1235799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.. ..++.+..|.|+.|..+..+..+ + ........ ..+. .-+.-.+|
T Consensus 147 asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~---~------~~~~~~~~----~~pl-----~R~~~ped 208 (237)
T d1uzma1 147 ASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALD---E------RIQQGALQ----FIPA-----KRVGTPAE 208 (237)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSC---H------HHHHHHGG----GCTT-----CSCBCHHH
T ss_pred HHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccC---H------HHHHHHHh----cCCC-----CCCcCHHH
Confidence 9999988887754 46899999999998764332111 0 11111111 1111 12345789
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++.++.+.+. --.|+++.+.+|
T Consensus 209 vA~~v~fL~S~~s~-~itG~~i~vdGG 234 (237)
T d1uzma1 209 VAGVVSFLASEDAS-YISGAVIPVDGG 234 (237)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCchhc-CCcCCeEEECCC
Confidence 99999988854332 223788888776
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.61 E-value=9.5e-15 Score=142.45 Aligned_cols=217 Identities=12% Similarity=0.045 Sum_probs=145.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++-||++++++|++.| .+|++..|+.. ++++ +.++. ..++.+
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~G---a~V~~~~r~~~------~~~~----------~~~~~--------~~~~~~ 55 (254)
T d1hdca_ 3 LSGKTVIITGGARGLGAEAARQAVAAG---ARVVLADVLDE------EGAA----------TAREL--------GDAARY 55 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHH------HHHH----------HHHTT--------GGGEEE
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCC---CEEEEEECCHH------HHHH----------HHHHh--------CCceEE
Confidence 689999999999999999999999999 67888888642 2221 11111 257889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|+++ ++..+.++ ..+|++||+|+.... .+.++..+++|+.|+..+.+.+... .
T Consensus 56 ~~~Dv~~-------~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~ 128 (254)
T d1hdca_ 56 QHLDVTI-------EEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA 128 (254)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcccCC-------HHHHHHHHHHHHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhc
Confidence 9999995 33333333 469999999997642 2457788999999999998877542 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|++||....... +....|+
T Consensus 129 ~~G~II~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 152 (254)
T d1hdca_ 129 GGGSIVNISSAAGLMGL--------------------------------------------------------ALTSSYG 152 (254)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHHH
T ss_pred CCCeecccccchhcccc--------------------------------------------------------cchhhHH
Confidence 45689999997543221 1235799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeec-CCCeeeeeeehH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG-ETKVIMDVIPVD 306 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~-~~~~~~d~VpVD 306 (570)
.||+..+.+.+.. ..++++..+.|+.|..+... ............ .|-.+ --...+
T Consensus 153 asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~-----------------~~~~~~~~~~~~~~pl~R-~g~~Pe 214 (254)
T d1hdca_ 153 ASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTA-----------------ETGIRQGEGNYPNTPMGR-VGNEPG 214 (254)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-----------------HHTCCCSTTSCTTSTTSS-CB-CHH
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccch-----------------hcCHHHHHHHHhCCCCCC-CCCCHH
Confidence 9999999888754 45799999999988653210 000000000000 00000 012358
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~~ 335 (570)
|||++++.++.+.+.- -.|+++.+.+|.
T Consensus 215 dvA~~v~fL~S~~a~~-itG~~i~vDGG~ 242 (254)
T d1hdca_ 215 EIAGAVVKLLSDTSSY-VTGAELAVDGGW 242 (254)
T ss_dssp HHHHHHHHHHSGGGTT-CCSCEEEESTTT
T ss_pred HHHHHHHHHhchhhCC-CCCceEEeCCCc
Confidence 9999999888643322 237899998773
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.60 E-value=1.2e-14 Score=141.22 Aligned_cols=220 Identities=15% Similarity=0.131 Sum_probs=143.8
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
-++||+++||||++-||++++++|++.| .+|++..|++... ..+.++ + ...++.
T Consensus 2 rL~gKvalVTGas~GIG~aia~~la~~G---a~V~~~~~~~~~~-~~~~~~--------------~--------~g~~~~ 55 (247)
T d2ew8a1 2 RLKDKLAVITGGANGIGRAIAERFAVEG---ADIAIADLVPAPE-AEAAIR--------------N--------LGRRVL 55 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCHH-HHHHHH--------------H--------TTCCEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCchHH-HHHHHH--------------H--------cCCcEE
Confidence 4789999999999999999999999999 6788888876422 111111 1 136788
Q ss_pred EEeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--
Q 008324 89 FVPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C-- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~-- 151 (570)
++.+|++++ +..+.+ +..+|++||+||.... .+.++..+++|+.|+..+.+.+.. |
T Consensus 56 ~~~~Dvs~~-------~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~ 128 (247)
T d2ew8a1 56 TVKCDVSQP-------GDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKR 128 (247)
T ss_dssp EEECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEEeeCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHh
Confidence 999999953 333333 3469999999998642 256788899999999999887754 2
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.++|++||....... +....|
T Consensus 129 ~~~G~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 152 (247)
T d2ew8a1 129 NGWGRIINLTSTTYWLKI--------------------------------------------------------EAYTHY 152 (247)
T ss_dssp HTCEEEEEECCGGGGSCC--------------------------------------------------------SSCHHH
T ss_pred cCCCCccccccchhcccC--------------------------------------------------------cccccc
Confidence 244689999987543211 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.. ..++++..|.|+.|-.+..+.... + .... ..........-+.-.+
T Consensus 153 ~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~--~------~~~~--------~~~~~~~~l~r~~~pe 216 (247)
T d2ew8a1 153 ISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASAL--S------AMFD--------VLPNMLQAIPRLQVPL 216 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----------------------------------CTTSSSCSCCCTH
T ss_pred hhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcccccccc--c------hhHH--------HHHHHhccCCCCCCHH
Confidence 99999988887754 457999999999987654321100 0 0000 0000000111234568
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++.+.+. --.|++..+.+|
T Consensus 217 dvA~~v~fL~S~~s~-~itG~~i~vDGG 243 (247)
T d2ew8a1 217 DLTGAAAFLASDDAS-FITGQTLAVDGG 243 (247)
T ss_dssp HHHHHHHHHTSGGGT-TCCSCEEEESSS
T ss_pred HHHHHHHHHhCchhc-CCcCCeEEECCC
Confidence 999999988753332 223788888776
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.60 E-value=4.9e-15 Score=144.10 Aligned_cols=220 Identities=14% Similarity=0.080 Sum_probs=144.1
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+++||+++||||++-||++++++|++.| .+|++..|+++..+ ..+ + .+..
T Consensus 2 ~l~GK~alITGas~GIG~aia~~la~~G---~~V~~~~~~~~~~~---~~~-~-----------------------~~~~ 51 (248)
T d2d1ya1 2 LFAGKGVLVTGGARGIGRAIAQAFAREG---ALVALCDLRPEGKE---VAE-A-----------------------IGGA 51 (248)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSTTHHH---HHH-H-----------------------HTCE
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHH---HHH-H-----------------------cCCe
Confidence 5899999999999999999999999999 67888888764321 111 1 1335
Q ss_pred EEeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--
Q 008324 89 FVPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C-- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~-- 151 (570)
++.+|++++ +..+.+ +..+|++||+||.... .+.++..+++|+.|+.++.+++.. |
T Consensus 52 ~~~~Dv~~~-------~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~ 124 (248)
T d2d1ya1 52 FFQVDLEDE-------RERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRK 124 (248)
T ss_dssp EEECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCH-------HHHHHHHHHHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccc
Confidence 688999953 323333 2469999999997642 245788899999999999988864 3
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.++|.+||....... +....|
T Consensus 125 ~~~G~Ii~isS~~~~~~~--------------------------------------------------------~~~~~Y 148 (248)
T d2d1ya1 125 VGGGAIVNVASVQGLFAE--------------------------------------------------------QENAAY 148 (248)
T ss_dssp TTCEEEEEECCGGGTSBC--------------------------------------------------------TTBHHH
T ss_pred cccccccccccccccccc--------------------------------------------------------cccchh
Confidence 234689999987543211 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.. ..++++..+.|+.|-.+.... .......+......+.... ...-+.-.+
T Consensus 149 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~---~~~~~~~~~~~~~~~~~~~---------pl~R~~~pe 216 (248)
T d2d1ya1 149 NASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLE---AIALSPDPERTRRDWEDLH---------ALRRLGKPE 216 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH---HHC--------CHHHHTTS---------TTSSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHH---HhhcCCCHHHHHHHHHhcC---------CCCCCcCHH
Confidence 99999998887654 458999999999886532100 0000000000011111100 011234579
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|+++..++.+... --.|+++++.+|
T Consensus 217 dia~~v~fL~S~~s~-~itG~~i~vDGG 243 (248)
T d2d1ya1 217 EVAEAVLFLASEKAS-FITGAILPVDGG 243 (248)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhCchhc-CCCCcEEEcCcC
Confidence 999999988754332 223788988776
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.60 E-value=2.4e-15 Score=145.94 Aligned_cols=216 Identities=14% Similarity=0.129 Sum_probs=146.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++-||++++++|++.| .+|++..|+++. .+.+.+ +. ..+...
T Consensus 2 l~gK~alITGas~GIG~a~a~~l~~~G---~~Vv~~~r~~~~---l~~~~~-------------~~--------~~~~~~ 54 (243)
T d1q7ba_ 2 FEGKIALVTGASRGIGRAIAETLAARG---AKVIGTATSENG---AQAISD-------------YL--------GANGKG 54 (243)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESSHHH---HHHHHH-------------HH--------GGGEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEeCCHHH---HHHHHH-------------Hh--------CCCCcE
Confidence 589999999999999999999999999 678888886422 222221 11 246778
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~ 152 (570)
+.+|++++ +..+.++ ..+|++||+|+.... .+.++..+++|+.|+..+.+.+.. | +
T Consensus 55 ~~~Dv~~~-------~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~ 127 (243)
T d1q7ba_ 55 LMLNVTDP-------ASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKK 127 (243)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCH-------HHhhhhhhhhhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHc
Confidence 99999953 3333332 369999999987642 256788899999999999888754 2 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|.+||....... +....|+
T Consensus 128 ~~G~II~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 151 (243)
T d1q7ba_ 128 RHGRIITIGSVVGTMGN--------------------------------------------------------GGQANYA 151 (243)
T ss_dssp TCEEEEEECCHHHHHCC--------------------------------------------------------TTCHHHH
T ss_pred CCCEeeeecchhhcCCC--------------------------------------------------------CCCHHHH
Confidence 44689999987543221 1135799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.. ..++++..+.|+.|-.+..+.. .+ .......... + ..-+...+|
T Consensus 152 asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~---~~------~~~~~~~~~~----p-----l~R~~~ped 213 (243)
T d1q7ba_ 152 AAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRAL---SD------DQRAGILAQV----P-----AGRLGGAQE 213 (243)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---CH------HHHHHHHTTC----T-----TSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhh---hh------hHHHHHHhcC----C-----CCCCCCHHH
Confidence 9999999888754 5689999999998866432111 01 1111121111 1 112456789
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|+++..++.+.+. --.|++.++.+|
T Consensus 214 vA~~v~fL~S~~s~-~itGq~i~vdGG 239 (243)
T d1q7ba_ 214 IANAVAFLASDEAA-YITGETLHVNGG 239 (243)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCchhc-CCcCCeEEECCC
Confidence 99999988753332 223788888776
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.59 E-value=2e-14 Score=139.20 Aligned_cols=217 Identities=17% Similarity=0.179 Sum_probs=146.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++.||++++++|++.| .+|++..|++.. .+.+. ++ ..++.+
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~G---a~V~~~~r~~~~---l~~~~-------------~~---------~~~~~~ 54 (242)
T d1cyda_ 3 FSGLRALVTGAGKGIGRDTVKALHASG---AKVVAVTRTNSD---LVSLA-------------KE---------CPGIEP 54 (242)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HH---------STTCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHH-------------Hh---------cCCCeE
Confidence 689999999999999999999999999 678888886422 11111 11 256788
Q ss_pred EeccCCCCCCCCCchhhHHHHhC---CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c---cCce
Q 008324 90 VPGDISSEDLGLKDSNLKEELWN---ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C---VKLK 155 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~---~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~---~~l~ 155 (570)
+.+|+++ ++..+.+++ ++|++||+||.... .+.++..+++|+.|+..+.+.+.. + +.-.
T Consensus 55 ~~~Dv~~-------~~~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g 127 (242)
T d1cyda_ 55 VCVDLGD-------WDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPG 127 (242)
T ss_dssp EECCTTC-------HHHHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE
T ss_pred EEEeCCC-------HHHHHHHHHHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccC
Confidence 9999995 444455555 58999999997643 245788899999999999887653 2 1335
Q ss_pred EEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHH
Q 008324 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (570)
Q Consensus 156 ~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
++|.+||....... +....|+.||
T Consensus 128 ~ii~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK 151 (242)
T d1cyda_ 128 SIVNVSSMVAHVTF--------------------------------------------------------PNLITYSSTK 151 (242)
T ss_dssp EEEEECCGGGTSCC--------------------------------------------------------TTBHHHHHHH
T ss_pred cccccchhhccccC--------------------------------------------------------CccccccchH
Confidence 78999987543221 1235799999
Q ss_pred HHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHH
Q 008324 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (570)
Q Consensus 236 ~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ 310 (570)
+..+.+.+.. ..++++..+-|+.|-.+..+.. .............. + ..-+...+|+|+
T Consensus 152 aal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~-------~~~~~~~~~~~~~~----p-----l~R~~~peeva~ 215 (242)
T d1cyda_ 152 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKV-------SADPEFARKLKERH----P-----LRKFAEVEDVVN 215 (242)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHH-------TCCHHHHHHHHHHS----T-----TSSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhh-------cCCHHHHHHHHhcC----C-----CCCCcCHHHHHH
Confidence 9999988765 4589999999998876432111 11111111111111 0 112355789999
Q ss_pred HHHHHHHHhhCCCCCCceEEecCC
Q 008324 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++.++.+.+.- -.|+++.+.+|
T Consensus 216 ~v~fL~S~~s~~-itG~~i~vDGG 238 (242)
T d1cyda_ 216 SILFLLSDRSAS-TSGGGILVDAG 238 (242)
T ss_dssp HHHHHHSGGGTT-CCSSEEEESTT
T ss_pred HHHHHhCchhcC-cCCceEEeCcc
Confidence 999887543322 23788888766
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.59 E-value=1.7e-14 Score=140.46 Aligned_cols=222 Identities=14% Similarity=0.086 Sum_probs=146.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++.||++++++|++.| .+|++..|+.+.. +... +.+.++. ..++.+
T Consensus 3 l~gK~~lITGas~GIG~aia~~la~~G---a~V~i~~r~~~~~---~~~~---------~~l~~~~--------g~~~~~ 59 (251)
T d1vl8a_ 3 LRGRVALVTGGSRGLGFGIAQGLAEAG---CSVVVASRNLEEA---SEAA---------QKLTEKY--------GVETMA 59 (251)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHH---------HHHHHHH--------CCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHH---------HHHHHHh--------CCcEEE
Confidence 589999999999999999999999999 6788888865322 1111 1122222 257889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-cc--
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-CV-- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~~-- 152 (570)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+..+.+.+.. |.
T Consensus 60 ~~~Dv~~~-------~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~ 132 (251)
T d1vl8a_ 60 FRCDVSNY-------EEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES 132 (251)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC
T ss_pred EEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc
Confidence 99999953 3333332 469999999997532 255788899999999999987654 42
Q ss_pred CceEEEEEeccee-ecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 153 KLKVFVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 153 ~l~~~V~vSTa~v-~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+-.++|.+||... .+.. .....|
T Consensus 133 ~~G~Ii~i~S~~~~~~~~--------------------------------------------------------~~~~~Y 156 (251)
T d1vl8a_ 133 DNPSIINIGSLTVEEVTM--------------------------------------------------------PNISAY 156 (251)
T ss_dssp SSCEEEEECCGGGTCCCS--------------------------------------------------------SSCHHH
T ss_pred ccccccccccchhccccC--------------------------------------------------------ccccch
Confidence 3458999987532 1110 113579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.. ..++++..|.||.|-.+..+. +... ......+....+ . .-+.-.+
T Consensus 157 ~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~---~~~~----~~~~~~~~~~~p----l-----~R~~~pe 220 (251)
T d1vl8a_ 157 AASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEA---VFSD----PEKLDYMLKRIP----L-----GRTGVPE 220 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHH---HHTC----HHHHHHHHHTCT----T-----SSCBCGG
T ss_pred HHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHh---ccCC----HHHHHHHHhcCC----C-----CCCCCHH
Confidence 99999999988754 458999999999987654321 1010 111112221111 0 1124568
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++.+... --.|+++.+.+|
T Consensus 221 dvA~~v~fL~S~~a~-~itG~~i~vDGG 247 (251)
T d1vl8a_ 221 DLKGVAVFLASEEAK-YVTGQIIFVDGG 247 (251)
T ss_dssp GGHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhCchhC-CCcCcEEEeCcC
Confidence 999999988764332 223788888776
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.58 E-value=2.2e-14 Score=138.94 Aligned_cols=213 Identities=14% Similarity=0.121 Sum_probs=143.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++-||++++++|++.| .+|++..|++. +++ ++ .+ .-+..+
T Consensus 3 L~gK~~lITGas~GIG~aia~~l~~~G---~~V~~~~r~~~------~l~-~~---------~~----------~~~~~~ 53 (242)
T d1ulsa_ 3 LKDKAVLITGAAHGIGRATLELFAKEG---ARLVACDIEEG------PLR-EA---------AE----------AVGAHP 53 (242)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHH------HHH-HH---------HH----------TTTCEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHH------HHH-HH---------HH----------HcCCeE
Confidence 689999999999999999999999999 67888888642 222 11 11 134668
Q ss_pred EeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc-c--
Q 008324 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-V-- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~-~-- 152 (570)
+.+|++++ +..+.+ +..+|++||+||.... .+.++..+++|+.|+..+.+.+.+. .
T Consensus 54 ~~~Dv~~~-------~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~ 126 (242)
T d1ulsa_ 54 VVMDVADP-------ASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK 126 (242)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEEecCCH-------HHHHHHHHHHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhcccccccc
Confidence 89999953 333333 2469999999997642 2457888999999999999877653 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-..++.+||+...+. +....|+
T Consensus 127 ~~~~i~~~ss~~~~~~---------------------------------------------------------~~~~~Y~ 149 (242)
T d1ulsa_ 127 NPGSIVLTASRVYLGN---------------------------------------------------------LGQANYA 149 (242)
T ss_dssp CCEEEEEECCGGGGCC---------------------------------------------------------TTCHHHH
T ss_pred ccceeeeeccccccCC---------------------------------------------------------CCCcchH
Confidence 3445666666432211 1235799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.. ..++++..+.|+.|-.+..+..+. .......... + ..-+.-.+|
T Consensus 150 asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~---------~~~~~~~~~~----p-----l~R~~~ped 211 (242)
T d1ulsa_ 150 ASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPE---------KVREKAIAAT----P-----LGRAGKPLE 211 (242)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCH---------HHHHHHHHTC----T-----TCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCH---------HHHHHHHhcC----C-----CCCCCCHHH
Confidence 9999999888754 457999999999997765432211 1111111111 0 011345789
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|+++..++.+... --.|++..+.+|
T Consensus 212 ia~~v~fL~S~~s~-~itG~~i~vDGG 237 (242)
T d1ulsa_ 212 VAYAALFLLSDESS-FITGQVLFVDGG 237 (242)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhchhhC-CCCCcEEEECCC
Confidence 99999988854332 223788888776
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.58 E-value=3.5e-14 Score=139.62 Aligned_cols=224 Identities=17% Similarity=0.207 Sum_probs=148.6
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
-++||+++||||++-||++++++|++.| .+|++..|+... .+++.+++ .. ..++.
T Consensus 3 rL~gKvalITGas~GIG~aia~~la~~G---a~V~i~~r~~~~---~~~~~~~l-------------~~------~~~~~ 57 (268)
T d2bgka1 3 RLQDKVAIITGGAGGIGETTAKLFVRYG---AKVVIADIADDH---GQKVCNNI-------------GS------PDVIS 57 (268)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHHH-------------CC------TTTEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHHh-------------cC------CCceE
Confidence 5799999999999999999999999999 678888886422 22222121 11 25678
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCC-----c----cccHHHHHHHhHHHHHHHHHHHHH-c
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK-----F----DERYDVAFGINTLGVIHLVNFAKK-C 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~-----f----~~~~~~~~~~Nv~gt~~ll~la~~-~ 151 (570)
++.+|++++ +..+.++ ..+|++||+||... + .+.++..+++|+.|+..+.+.+.. |
T Consensus 58 ~~~~Dv~~~-------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m 130 (268)
T d2bgka1 58 FVHCDVTKD-------EDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVM 130 (268)
T ss_dssp EEECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred EEEccCCCH-------HHHHHHHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchH
Confidence 899999953 3333333 46999999999642 1 145778899999999999987754 3
Q ss_pred --cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc
Q 008324 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (570)
Q Consensus 152 --~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
.+-.++|.+||........ +...
T Consensus 131 ~~~~~g~ii~iss~~~~~~~~-------------------------------------------------------~~~~ 155 (268)
T d2bgka1 131 IPAKKGSIVFTASISSFTAGE-------------------------------------------------------GVSH 155 (268)
T ss_dssp GGGTCEEEEEECCGGGTCCCT-------------------------------------------------------TSCH
T ss_pred hhcCCCCcccccccccccccc-------------------------------------------------------cccc
Confidence 2445788888765432111 1234
Q ss_pred hHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHH-hcCCceeeecCCCeeeeee
Q 008324 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVAS-AQGNLRCLVGETKVIMDVI 303 (570)
Q Consensus 230 ~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~-~~G~~~~~~~~~~~~~d~V 303 (570)
.|+.||+..+.+.+.. ..++++..|.|+.|-++......+... ...... .... .. ..-+.
T Consensus 156 ~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~------~~~~~~~~~~~--~~------~gr~~ 221 (268)
T d2bgka1 156 VYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDS------SRVEELAHQAA--NL------KGTLL 221 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCH------HHHHHHHHHTC--SS------CSCCC
T ss_pred ccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCH------HHHHHHHHhcc--cc------CCCCc
Confidence 7999999999888754 458999999999998765432222111 111111 1000 00 01235
Q ss_pred ehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
..+|+|++++.++.+.+. --.|+++.+.+|
T Consensus 222 ~pedvA~~v~fL~S~~s~-~itGq~i~VDGG 251 (268)
T d2bgka1 222 RAEDVADAVAYLAGDESK-YVSGLNLVIDGG 251 (268)
T ss_dssp CHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhChhhC-CccCceEEECcC
Confidence 679999999988864332 223789988877
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.57 E-value=1.7e-14 Score=140.83 Aligned_cols=221 Identities=16% Similarity=0.130 Sum_probs=146.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++-||++++++|++.| .+|++..|++.. .+.+.+++ ++. ..++.+
T Consensus 9 L~gK~alITGas~GIG~aia~~la~~G---a~V~~~~r~~~~---~~~~~~~l---------~~~---------g~~~~~ 64 (255)
T d1fmca_ 9 LDGKCAIITGAGAGIGKEIAITFATAG---ASVVVSDINADA---ANHVVDEI---------QQL---------GGQAFA 64 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTT---CEEEEEESCHHH---HHHHHHHH---------HHT---------TCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHHH---------HHc---------CCcEEE
Confidence 789999999999999999999999999 678888886432 22222121 111 357889
Q ss_pred EeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc------cccHHHHHHHhHHHHHHHHHHHHH-cc--C
Q 008324 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF------DERYDVAFGINTLGVIHLVNFAKK-CV--K 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f------~~~~~~~~~~Nv~gt~~ll~la~~-~~--~ 153 (570)
+.+|++++ +..+.+ +..+|++||+||.... .+.++..+++|+.|+..+.+.+.. +. +
T Consensus 65 ~~~Dvs~~-------~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~ 137 (255)
T d1fmca_ 65 CRCDITSE-------QELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG 137 (255)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EEccCCCH-------HHHHHHHHHHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc
Confidence 99999953 322232 3469999999997532 245778899999999999886644 32 3
Q ss_pred ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 154 l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
-.++|.+||....... +....|+.
T Consensus 138 ~g~Ii~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 161 (255)
T d1fmca_ 138 GGVILTITSMAAENKN--------------------------------------------------------INMTSYAS 161 (255)
T ss_dssp CEEEEEECCGGGTCCC--------------------------------------------------------TTCHHHHH
T ss_pred ccccccccccchhccc--------------------------------------------------------cccccchh
Confidence 4578888886543221 12357999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHH
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..+.+.+.. ..++.+..|-||.|-.+..+. . .. ...........+ . .-+.-.+|+
T Consensus 162 sKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~------~-~~-~e~~~~~~~~~p----l-----~R~g~pedv 224 (255)
T d1fmca_ 162 SKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS------V-IT-PEIEQKMLQHTP----I-----RRLGQPQDI 224 (255)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT------T-CC-HHHHHHHHHTCS----S-----CSCBCHHHH
T ss_pred HHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhc------c-CC-HHHHHHHHhcCC----C-----CCCcCHHHH
Confidence 999999888754 457999999999986642211 0 00 111122221111 0 113456899
Q ss_pred HHHHHHHHHHhhCCCCCCceEEecCCC
Q 008324 309 VNAMIVAMVAHAKQPSDANIYHVGSSL 335 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s~~ 335 (570)
|+++..++.+... --.|++..+.+|.
T Consensus 225 A~~v~fL~S~~s~-~itG~~i~vDGG~ 250 (255)
T d1fmca_ 225 ANAALFLCSPAAS-WVSGQILTVSGGG 250 (255)
T ss_dssp HHHHHHHHSGGGT-TCCSCEEEESTTS
T ss_pred HHHHHHHhCchhc-CCcCCEEEECcCc
Confidence 9999988853332 2237889888873
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.57 E-value=4.4e-14 Score=138.14 Aligned_cols=224 Identities=20% Similarity=0.186 Sum_probs=146.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++-||++++++|++.| .+|++..|++... +.+.++ +++. ..++.+
T Consensus 6 L~GK~alITGas~GIG~aia~~la~~G---a~V~~~~r~~~~l---~~~~~~---------~~~~---------g~~~~~ 61 (259)
T d2ae2a_ 6 LEGCTALVTGGSRGIGYGIVEELASLG---ASVYTCSRNQKEL---NDCLTQ---------WRSK---------GFKVEA 61 (259)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHH---------HHHT---------TCEEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHH---------HHhc---------CCCceE
Confidence 579999999999999999999999999 6788888864321 121111 1111 357788
Q ss_pred EeccCCCCCCCCCchhhHHHH-------hC-CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---
Q 008324 90 VPGDISSEDLGLKDSNLKEEL-------WN-ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~-~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~--- 151 (570)
+.+|++++ +..+.+ +. .+|++||+||.... .+.++..+++|+.|+..+.+.+...
T Consensus 62 ~~~Dv~~~-------~~v~~~~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~ 134 (259)
T d2ae2a_ 62 SVCDLSSR-------SERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKA 134 (259)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEeeCCCH-------HHHHHHHHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhh
Confidence 99999953 222222 22 48999999997642 2457788999999999998877652
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.++|++||....... +....|
T Consensus 135 ~~~G~Ii~isS~~~~~~~--------------------------------------------------------~~~~~Y 158 (259)
T d2ae2a_ 135 SERGNVVFISSVSGALAV--------------------------------------------------------PYEAVY 158 (259)
T ss_dssp TSSEEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred hccccccccccccccccc--------------------------------------------------------ccccch
Confidence 244689999997543211 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.. ..++++..|.|+.|-.+..+... .. ......+..+....+ ..-+.-.+
T Consensus 159 ~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~---~~-~~~~~~~~~~~~~~p---------l~R~g~pe 225 (259)
T d2ae2a_ 159 GATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTI---QD-PEQKENLNKLIDRCA---------LRRMGEPK 225 (259)
T ss_dssp HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHT---TS-HHHHHHHHHHHHTST---------TCSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhh---hc-hhhHHHHHHHHhcCC---------CCCCcCHH
Confidence 99999998888754 45899999999998764321100 00 000111111111111 01134578
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++.+... --.|+++.+.+|
T Consensus 226 dvA~~v~fL~S~~s~-~itG~~i~VDGG 252 (259)
T d2ae2a_ 226 ELAAMVAFLCFPAAS-YVTGQIIYVDGG 252 (259)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhCchhC-CCcCcEEEECCC
Confidence 999999988753332 223788888776
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.57 E-value=1.5e-14 Score=141.69 Aligned_cols=232 Identities=16% Similarity=0.160 Sum_probs=145.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++-||++++++|++.| .+|++..|+.... .+.+.+++ .+.. ..++.+
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~G---a~V~~~~r~~~~~--~~~~~~~~---------~~~~--------g~~~~~ 59 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQG---ADIVLNGFGDAAE--IEKVRAGL---------AAQH--------GVKVLY 59 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEECCSCHHH--HHHHHHHH---------HHHH--------TSCEEE
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCcHHH--HHHHHHHH---------HHhc--------CCcEEE
Confidence 689999999999999999999999999 6788888865321 22222111 1111 357889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 152 (570)
+.+|+++ ++..+.++ ..+|++||+||.... .+.++..+++|+.|+..+.+.+... .
T Consensus 60 ~~~Dv~~-------~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~ 132 (260)
T d1x1ta1 60 DGADLSK-------GEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ 132 (260)
T ss_dssp ECCCTTS-------HHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EECCCCC-------HHHHHHHHHHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhc
Confidence 9999995 33333433 469999999997532 2557888999999999988876542 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|.+||....... +....|+
T Consensus 133 ~~G~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 156 (260)
T d1x1ta1 133 GFGRIINIASAHGLVAS--------------------------------------------------------ANKSAYV 156 (260)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHHH
T ss_pred CCceEeecccccceecc--------------------------------------------------------CCcchhh
Confidence 44689999987543211 1235799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCc-cccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPG-WVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~g-w~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
.||+..+.+.+.. ..++.+..+.|+.|-.+..+.... ..+. .+... ....+ ..........-+...+
T Consensus 157 asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~-~~~~~--~~~~~----~~~~~~~Pl~R~g~pe 229 (260)
T d1x1ta1 157 AAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEK-NGVDQ--ETAAR----ELLSEKQPSLQFVTPE 229 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------------CHHHHCTTCCCBCHH
T ss_pred hhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhh-cCCCh--HHHHH----HHHHhcCCCCCCcCHH
Confidence 9999998888754 457999999999987654321110 0000 00000 00000 0000000011245678
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++.+.+. --.|++.++.+|
T Consensus 230 diA~~v~fL~S~~a~-~itG~~i~vDGG 256 (260)
T d1x1ta1 230 QLGGTAVFLASDAAA-QITGTTVSVDGG 256 (260)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhChhhC-CCcCCEEEECcc
Confidence 999999988864332 223788888776
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.57 E-value=2.4e-14 Score=140.13 Aligned_cols=222 Identities=14% Similarity=0.122 Sum_probs=147.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++.||++++++|++.| .+|++..|++... .+.+.++ +++ ...++.+
T Consensus 5 L~gK~alITGas~GIG~aia~~la~~G---~~Vv~~~r~~~~~--~~~~~~~---------~~~---------~g~~~~~ 61 (261)
T d1geea_ 5 LEGKVVVITGSSTGLGKSMAIRFATEK---AKVVVNYRSKEDE--ANSVLEE---------IKK---------VGGEAIA 61 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHH--HHHHHHH---------HHH---------TTCEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCcHHH--HHHHHHH---------HHh---------cCCcEEE
Confidence 789999999999999999999999999 6888888875321 1222211 111 1357889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-cc--
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-CV-- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~~-- 152 (570)
+.+|++++ +..+.++ ..+|++||+||.... .+.++..+++|+.|+..+.+.+.. |.
T Consensus 62 ~~~Dvt~~-------~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~ 134 (261)
T d1geea_ 62 VKGDVTVE-------SDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEN 134 (261)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EEccCCCH-------HHHHHHHHHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccc
Confidence 99999953 3333333 369999999997642 245788899999999999887654 31
Q ss_pred C-ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 153 K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 153 ~-l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+ -..+|.+||....... +....|
T Consensus 135 ~~g~~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 158 (261)
T d1geea_ 135 DIKGTVINMSSVHEKIPW--------------------------------------------------------PLFVHY 158 (261)
T ss_dssp TCCCEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred cccccccccccchhcccC--------------------------------------------------------cccccc
Confidence 2 3358888887533211 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.. ..++.+..|.|+.|-.+... +.... ........... + ..-+...+
T Consensus 159 ~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~------~~~~~-~~~~~~~~~~~----p-----l~R~~~pe 222 (261)
T d1geea_ 159 AASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINA------EKFAD-PEQRADVESMI----P-----MGYIGEPE 222 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGH------HHHHS-HHHHHHHHTTC----T-----TSSCBCHH
T ss_pred ccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHh------hhcCC-HHHHHHHHhcC----C-----CCCCCCHH
Confidence 99999999888754 45899999999998764321 00001 11111121111 0 11134679
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|+++..++.+... --.++++.+.+|
T Consensus 223 diA~~v~fL~S~~s~-~itG~~i~vDGG 249 (261)
T d1geea_ 223 EIAAVAAWLASSEAS-YVTGITLFADGG 249 (261)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhCchhc-CCcCCeEEECCC
Confidence 999999988854332 223788988877
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.57 E-value=6.2e-15 Score=144.12 Aligned_cols=225 Identities=17% Similarity=0.193 Sum_probs=145.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++.||++++++|++.| .+|++..|+... .+.+. ++. ..++.+
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~G---a~V~~~~r~~~~---l~~~~-------------~~~--------~~~~~~ 55 (256)
T d1k2wa_ 3 LDGKTALITGSARGIGRAFAEAYVREG---ARVAIADINLEA---ARATA-------------AEI--------GPAACA 55 (256)
T ss_dssp TTTEEEEEETCSSHHHHHHHHHHHHTT---EEEEEEESCHHH---HHHHH-------------HHH--------CTTEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHH-------------HHh--------CCceEE
Confidence 689999999999999999999999999 788888886421 12211 111 367889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHH-Hc-c-
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAK-KC-V- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~-~~-~- 152 (570)
+.+|++++ +..+.++ ..+|++||+||.... .+.++..+++|+.|+..+.+.+. .+ +
T Consensus 56 ~~~Dvt~~-------~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~ 128 (256)
T d1k2wa_ 56 IALDVTDQ-------ASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAG 128 (256)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeeCCCH-------HHHHHHHHHHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHh
Confidence 99999953 3333332 469999999997643 25578889999999999988643 32 2
Q ss_pred -CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 153 -KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 153 -~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+-.++|++||....... +....|
T Consensus 129 ~~~g~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 152 (256)
T d1k2wa_ 129 GRGGKIINMASQAGRRGE--------------------------------------------------------ALVGVY 152 (256)
T ss_dssp TSCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred ccCCccccccchhhcccc--------------------------------------------------------ccccch
Confidence 34689999987543211 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCc-cccCccc-hHHHHHHHhcCCceeeecCCCeeeeeee
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPG-WVEDLKT-INTLFVASAQGNLRCLVGETKVIMDVIP 304 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~g-w~~~~~~-~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
..||+..+.+.+.. ..++++..|.||.|-.+..+.... +.+.... .......+.... | ..-+..
T Consensus 153 ~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----P-----lgR~~~ 223 (256)
T d1k2wa_ 153 CATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAV----P-----FGRMGR 223 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHS----T-----TSSCBC
T ss_pred hhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcC----C-----CCCCcC
Confidence 99999999888754 458999999999887753211000 0000000 000000111000 0 011345
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.+|+|++++.++.+.+.- -.|++..+.+|
T Consensus 224 p~evA~~v~fL~S~~a~~-iTG~~i~vDGG 252 (256)
T d1k2wa_ 224 AEDLTGMAIFLATPEADY-IVAQTYNVDGG 252 (256)
T ss_dssp HHHHHHHHHHTTSGGGTT-CCSCEEEESTT
T ss_pred HHHHHHHHHHHhCchhCC-ccCceEEECcc
Confidence 789999999877533322 23788888776
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.56 E-value=9.2e-14 Score=135.76 Aligned_cols=225 Identities=16% Similarity=0.138 Sum_probs=146.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|||||||+-||++++++|++.| .+|++..|++... +...++ +++. ..++.+
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G---~~V~i~~r~~~~l---~~~~~~---------~~~~---------~~~~~~ 59 (258)
T d1ae1a_ 4 LKGTTALVTGGSKGIGYAIVEELAGLG---ARVYTCSRNEKEL---DECLEI---------WREK---------GLNVEG 59 (258)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHH---------HHHT---------TCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHH---------HHhc---------CCCceE
Confidence 689999999999999999999999999 6788998875321 111111 1111 356788
Q ss_pred EeccCCCCCCCCCchhhHHHH-------h-CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---
Q 008324 90 VPGDISSEDLGLKDSNLKEEL-------W-NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~-~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~--- 151 (570)
+.+|++++ +..+.+ . ..+|+++|+|+.... .+.++..+++|+.++..+.+++...
T Consensus 60 ~~~D~s~~-------~~~~~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~ 132 (258)
T d1ae1a_ 60 SVCDLLSR-------TERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKA 132 (258)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEeecCCH-------HHHHHHHHHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccc
Confidence 99999953 322222 2 248999999997642 2567888999999999998877532
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
++..++|++||....... +....|
T Consensus 133 ~~~g~ii~isS~~~~~~~--------------------------------------------------------~~~~~Y 156 (258)
T d1ae1a_ 133 SQNGNVIFLSSIAGFSAL--------------------------------------------------------PSVSLY 156 (258)
T ss_dssp HTSEEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred cccccccccccccccccc--------------------------------------------------------ccchhH
Confidence 356689999987653221 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.+|+..+.+.+.. ..++.+..+.|+.|..+..+... .........+..+.... + ..-+...+
T Consensus 157 ~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~---~~~~~~~~~~~~~~~~~----p-----lgR~~~pe 224 (258)
T d1ae1a_ 157 SASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAI---KKNPHQKEEIDNFIVKT----P-----MGRAGKPQ 224 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------------CHHHHHHHHHHS----T-----TCSCBCHH
T ss_pred HHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhh---hhhhhhHHHHHHHHhcC----C-----CCCCcCHH
Confidence 99999999888755 45799999999999876442211 11111112222221110 0 01256789
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++.+.+.- -.|+.+.+.+|
T Consensus 225 diA~~v~fL~S~~s~~-itG~~i~vDGG 251 (258)
T d1ae1a_ 225 EVSALIAFLCFPAASY-ITGQIIWADGG 251 (258)
T ss_dssp HHHHHHHHHHSGGGTT-CCSCEEEESTT
T ss_pred HHHHHHHHHhChhhCC-CcCcEEEeCCC
Confidence 9999999988543322 23677777766
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.56 E-value=2.4e-14 Score=140.04 Aligned_cols=229 Identities=14% Similarity=0.085 Sum_probs=148.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++-||++++++|++.| .+|++..|+.... +...++ +.+..+ ..++..
T Consensus 2 l~gK~alITGas~GIG~aia~~la~~G---a~V~i~~r~~~~l---~~~~~~---------~~~~~~-------~~~~~~ 59 (258)
T d1iy8a_ 2 FTDRVVLITGGGSGLGRATAVRLAAEG---AKLSLVDVSSEGL---EASKAA---------VLETAP-------DAEVLT 59 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHH---------HHHHCT-------TCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHH---------HHhhCC-------CCeEEE
Confidence 689999999999999999999999999 7888888865332 111111 111111 257889
Q ss_pred EeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHH-c--
Q 008324 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKK-C-- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~----f----~~~~~~~~~~Nv~gt~~ll~la~~-~-- 151 (570)
+.+|++++ +..+.+ +..+|++||+||... + .+.++..+++|+.|+..+.+.+.. +
T Consensus 60 ~~~Dvt~~-------~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~ 132 (258)
T d1iy8a_ 60 TVADVSDE-------AQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMRE 132 (258)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EeccCCCH-------HHHHHHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhh
Confidence 99999953 333333 346999999999642 2 245778899999999999987744 2
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
++-.++|.+||....... +....|
T Consensus 133 ~~~G~Ii~isS~~~~~~~--------------------------------------------------------~~~~~Y 156 (258)
T d1iy8a_ 133 QGSGMVVNTASVGGIRGI--------------------------------------------------------GNQSGY 156 (258)
T ss_dssp HTCCEEEEECCGGGTSBC--------------------------------------------------------SSBHHH
T ss_pred hcCCCCcccccHhhccCC--------------------------------------------------------CCchHH
Confidence 244679999987543211 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.. ..++++..+.||.|..+..+......+. .........+....+ ..-+.-.+
T Consensus 157 ~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~p---------l~R~~~p~ 226 (258)
T d1iy8a_ 157 AAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDP-ENPRKAAEEFIQVNP---------SKRYGEAP 226 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCT-TCHHHHHHHHHTTCT---------TCSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCc-ccHHHHHHHHHhcCC---------CCCCcCHH
Confidence 99999998887754 4589999999999876432100000000 011111222222111 11134578
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++.+.+. --.|++..+.+|
T Consensus 227 dvA~~v~fL~S~~s~-~itG~~i~VDGG 253 (258)
T d1iy8a_ 227 EIAAVVAFLLSDDAS-YVNATVVPIDGG 253 (258)
T ss_dssp HHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhCchhc-CCcCceEEcCcc
Confidence 999999988864332 223788888877
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.55 E-value=1.7e-13 Score=133.21 Aligned_cols=219 Identities=14% Similarity=0.143 Sum_probs=147.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++-||++++++|++.| .+|++..|++.. .+.+.+++ ++ ...++..
T Consensus 8 lenKvalITGas~GIG~a~a~~la~~G---a~V~~~~r~~~~---l~~~~~~l---------~~---------~g~~~~~ 63 (251)
T d2c07a1 8 GENKVALVTGAGRGIGREIAKMLAKSV---SHVICISRTQKS---CDSVVDEI---------KS---------FGYESSG 63 (251)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTS---SEEEEEESSHHH---HHHHHHHH---------HT---------TTCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEECCHHH---HHHHHHHH---------Hh---------cCCcEEE
Confidence 579999999999999999999999999 678888886432 22222121 11 1357889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--c
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~ 152 (570)
+.+|+++ ++..+.++ ..+|++||+|+.... .+.++..+++|+.|+..+.+++.. | .
T Consensus 64 ~~~Dvt~-------~~~v~~~~~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~ 136 (251)
T d2c07a1 64 YAGDVSK-------KEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN 136 (251)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred EEccCCC-------HHHHHHHHHHHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccC
Confidence 9999995 33333333 469999999997542 256788899999999999887653 2 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|.+||....... +....|+
T Consensus 137 ~~G~IVnisS~~~~~~~--------------------------------------------------------~~~~~Y~ 160 (251)
T d2c07a1 137 RYGRIINISSIVGLTGN--------------------------------------------------------VGQANYS 160 (251)
T ss_dssp TCEEEEEECCTHHHHCC--------------------------------------------------------TTCHHHH
T ss_pred CCeEEEEECCHHhcCCC--------------------------------------------------------CCCHHHH
Confidence 45689999997643221 1134799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.. ..++++..|.|+.|-.+..+.. . ......+....+ ..-+...+|
T Consensus 161 asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~---~------~~~~~~~~~~~p---------l~R~~~ped 222 (251)
T d2c07a1 161 SSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI---S------EQIKKNIISNIP---------AGRMGTPEE 222 (251)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C---C------HHHHHHHHTTCT---------TSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccccc---C------HHHHHHHHhcCC---------CCCCcCHHH
Confidence 9999999988765 4589999999999977543221 1 112222222111 112456789
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|++++.++.+.+. --.|++..+.+|
T Consensus 223 vA~~v~fL~S~~s~-~itG~~i~vDGG 248 (251)
T d2c07a1 223 VANLACFLSSDKSG-YINGRVFVIDGG 248 (251)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCchhC-CCcCcEEEECCC
Confidence 99999888754332 223788888776
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=4.7e-14 Score=137.17 Aligned_cols=221 Identities=14% Similarity=0.097 Sum_probs=146.4
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.++||+++||||++.||+++++.|++.| .+|++..|++.. .+.+. ++ ..++.
T Consensus 3 rl~GK~alITGas~GIG~aia~~la~~G---a~V~i~~r~~~~---~~~~~-------------~~---------~~~~~ 54 (250)
T d1ydea1 3 RYAGKVVVVTGGGRGIGAGIVRAFVNSG---ARVVICDKDESG---GRALE-------------QE---------LPGAV 54 (250)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHH-------------HH---------CTTEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHH-------------Hh---------cCCCe
Confidence 5799999999999999999999999999 678888886422 22222 11 25678
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCC----cc----ccHHHHHHHhHHHHHHHHHHHHH-cc
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK----FD----ERYDVAFGINTLGVIHLVNFAKK-CV 152 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~----f~----~~~~~~~~~Nv~gt~~ll~la~~-~~ 152 (570)
++.+|++++ +..+.++ ..+|++||+||... +. +.++..+++|+.|+.++.+.+.. |+
T Consensus 55 ~~~~Dvs~~-------~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~ 127 (250)
T d1ydea1 55 FILCDVTQE-------DDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLR 127 (250)
T ss_dssp EEECCTTSH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEEccCCCH-------HHHHHHHHHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHH
Confidence 899999953 3333333 46999999999642 22 44778899999999999887764 22
Q ss_pred -CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 153 -KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 153 -~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+-.++|.+||....... +....|
T Consensus 128 ~~~G~Ii~isS~~~~~~~--------------------------------------------------------~~~~~Y 151 (250)
T d1ydea1 128 KSQGNVINISSLVGAIGQ--------------------------------------------------------AQAVPY 151 (250)
T ss_dssp HHTCEEEEECCHHHHHCC--------------------------------------------------------TTCHHH
T ss_pred hCCCCCcccccccccccc--------------------------------------------------------cCcchh
Confidence 22589999987643221 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.. ..++++..|.|+.|-.+..+..... .......+.......+ ..-+.-.+
T Consensus 152 ~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~---~~~~~~~~~~~~~~~p---------l~R~g~p~ 219 (250)
T d1ydea1 152 VATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAAL---MPDPRASIREGMLAQP---------LGRMGQPA 219 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTT---SSSHHHHHHHHHHTST---------TSSCBCHH
T ss_pred HHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhc---CCCHHHHHHHHHhcCC---------CCCCCCHH
Confidence 99999998887754 5589999999999865422100000 0111112222211110 11235678
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++.+ + .--.++++.+.+|
T Consensus 220 eva~~v~fL~Sd-a-~~itG~~i~vDGG 245 (250)
T d1ydea1 220 EVGAAAVFLASE-A-NFCTGIELLVTGG 245 (250)
T ss_dssp HHHHHHHHHHHH-C-TTCCSCEEEESTT
T ss_pred HHHHHHHHHhCc-c-CCCcCCeEEECCC
Confidence 999999988753 3 2224788888776
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.54 E-value=3.2e-14 Score=139.59 Aligned_cols=233 Identities=14% Similarity=0.108 Sum_probs=141.1
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.++||+++||||++-||++++++|++.| .+|++..|+... .+.+.+++ ++... ...++.
T Consensus 2 rl~gKvalVTGas~GIG~aia~~la~~G---a~V~~~~r~~~~---l~~~~~~l---------~~~~~------~~~~~~ 60 (264)
T d1spxa_ 2 RFAEKVAIITGSSNGIGRATAVLFAREG---AKVTITGRHAER---LEETRQQI---------LAAGV------SEQNVN 60 (264)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHHH---------HHTTC------CGGGEE
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHHH---------HhcCC------CcCceE
Confidence 3789999999999999999999999999 678888886532 22222222 11111 125689
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCC-------c----cccHHHHHHHhHHHHHHHHHHHHH
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK-------F----DERYDVAFGINTLGVIHLVNFAKK 150 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~-------f----~~~~~~~~~~Nv~gt~~ll~la~~ 150 (570)
++.+|+++ ++..+.++ ..+|++||+||... + .+.++..+++|+.|+..+.+.+..
T Consensus 61 ~~~~Dvt~-------~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p 133 (264)
T d1spxa_ 61 SVVADVTT-------DAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVP 133 (264)
T ss_dssp EEECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EEEccCCC-------HHHHHHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCC
Confidence 99999995 33333333 36999999998642 1 145778899999999999888765
Q ss_pred c-c-CceEEEEEeccee-ecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCC
Q 008324 151 C-V-KLKVFVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (570)
Q Consensus 151 ~-~-~l~~~V~vSTa~v-~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 227 (570)
. + +-.++|.++|... .... +.
T Consensus 134 ~m~~~~g~iI~~~S~~~~~~~~--------------------------------------------------------~~ 157 (264)
T d1spxa_ 134 HLSSTKGEIVNISSIASGLHAT--------------------------------------------------------PD 157 (264)
T ss_dssp HHHHHTCEEEEECCTTSSSSCC--------------------------------------------------------TT
T ss_pred ccccccCcceeeeeeccccccC--------------------------------------------------------CC
Confidence 2 1 2345666665432 1110 11
Q ss_pred CchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeee
Q 008324 228 PNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDV 302 (570)
Q Consensus 228 ~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
...|+.||+..+.+.+.. ..++++..|.||.|-.+........-+............... .|. .-+
T Consensus 158 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~----~Pl-----~R~ 228 (264)
T d1spxa_ 158 FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKEC----VPA-----GVM 228 (264)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHH----CTT-----SSC
T ss_pred chhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhc----CCC-----CCC
Confidence 246999999998888754 458999999999987654321111001001111111111110 000 113
Q ss_pred eehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
...+|+|++++.++.+....--.|+++.+.+|
T Consensus 229 g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG 260 (264)
T d1spxa_ 229 GQPQDIAEVIAFLADRKTSSYIIGHQLVVDGG 260 (264)
T ss_dssp BCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHhCCcccCCccCceEEeCCC
Confidence 45689999999887533222123788888776
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.54 E-value=1.2e-13 Score=134.99 Aligned_cols=220 Identities=16% Similarity=0.133 Sum_probs=135.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++-||++++++|++.| .+|++..|++... +...++ +.+. ..++..
T Consensus 6 LkgK~alVTGas~GIG~aiA~~la~~G---a~V~~~~r~~~~l---~~~~~~---------~~~~---------~~~~~~ 61 (259)
T d1xq1a_ 6 LKAKTVLVTGGTKGIGHAIVEEFAGFG---AVIHTCARNEYEL---NECLSK---------WQKK---------GFQVTG 61 (259)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHH---------HHHT---------TCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHH---------HHhc---------CCceEE
Confidence 489999999999999999999999999 6788888865321 111111 1111 257889
Q ss_pred EeccCCCCCCCCCchhhHHHH-------h-CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc---
Q 008324 90 VPGDISSEDLGLKDSNLKEEL-------W-NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~-~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~--- 151 (570)
+.+|++++ +..+.+ + ..+|+++|+||.... .+.++..+++|+.|+..+.+.+...
T Consensus 62 ~~~Dv~~~-------~~v~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~ 134 (259)
T d1xq1a_ 62 SVCDASLR-------PEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKA 134 (259)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeccCCCH-------HHHHHHHHHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccc
Confidence 99999953 222222 2 358999999997542 2557888999999999998877652
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.++|++||....... +....|
T Consensus 135 ~~~G~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 158 (259)
T d1xq1a_ 135 SGCGNIIFMSSIAGVVSA--------------------------------------------------------SVGSIY 158 (259)
T ss_dssp HSSCEEEEEC------------------------------------------------------------------CCHH
T ss_pred cccccccccccccccccc--------------------------------------------------------cccccc
Confidence 244689999987543211 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.. ..++++..|-|+.|-.+..+... .+. ..... .......-+.-.+
T Consensus 159 ~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~--~~~------~~~~~---------~~~~pl~R~~~pe 221 (259)
T d1xq1a_ 159 SATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY--DDE------FKKVV---------ISRKPLGRFGEPE 221 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC------------------------------------------CCGG
T ss_pred cccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhc--hHH------HHHHH---------HhCCCCCCCcCHH
Confidence 99999999888754 56899999999998765432110 000 00000 0000011234568
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++.+.+. --.|++..+.+|
T Consensus 222 dvA~~v~fL~S~~s~-~iTG~~i~vDGG 248 (259)
T d1xq1a_ 222 EVSSLVAFLCMPAAS-YITGQTICVDGG 248 (259)
T ss_dssp GGHHHHHHHTSGGGT-TCCSCEEECCCC
T ss_pred HHHHHHHHHhCchhc-CCcCcEEEeCCC
Confidence 999999887753332 223778877766
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=5.8e-14 Score=140.01 Aligned_cols=228 Identities=11% Similarity=0.122 Sum_probs=148.1
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
..++||+++||||++-||+++++.|++.| .+|++..|+..... ... +.|+++.+. ....++
T Consensus 8 g~L~gKvalITGas~GIG~aia~~la~~G---a~Vvi~~r~~~~l~---~~~---------~el~~~~~~----~~~~~~ 68 (297)
T d1yxma1 8 GLLQGQVAIVTGGATGIGKAIVKELLELG---SNVVIASRKLERLK---SAA---------DELQANLPP----TKQARV 68 (297)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHH---HHH---------HHHHHTSCT----TCCCCE
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHH---HHH---------HHHHhhhcc----ccCceE
Confidence 35899999999999999999999999999 67888888653221 111 122222221 123578
Q ss_pred EEEeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c-
Q 008324 88 TFVPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C- 151 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~- 151 (570)
.++.+|++++ +..+.+ ...+|++||+|+.... .+.++..+++|+.|+..+.+.+.. |
T Consensus 69 ~~~~~Dvs~~-------~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~ 141 (297)
T d1yxma1 69 IPIQCNIRNE-------EEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWM 141 (297)
T ss_dssp EEEECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTH
T ss_pred EEEeccCCCH-------HHHHHHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhc
Confidence 9999999953 333333 3469999999997542 256788899999999999887754 3
Q ss_pred -cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+-.++|.+|++...+. +....
T Consensus 142 ~~~~g~Ii~~ss~~~~~~---------------------------------------------------------~~~~~ 164 (297)
T d1yxma1 142 KEHGGSIVNIIVPTKAGF---------------------------------------------------------PLAVH 164 (297)
T ss_dssp HHHCEEEEEECCCCTTCC---------------------------------------------------------TTCHH
T ss_pred cccccccccccccccccc---------------------------------------------------------ccccc
Confidence 23456777765422110 12357
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCC-ccccCccchHHHHHHHhcCCceeeecCCCeeeeeee
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFP-GWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~-gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
|+.||+..+.+.+.. ..++++..|.||.|..+...... .+.+. .........+. .-+..
T Consensus 165 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~----------~~~~~~~~~pl-----gR~g~ 229 (297)
T d1yxma1 165 SGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQS----------FFEGSFQKIPA-----KRIGV 229 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGG----------GGTTGGGGSTT-----SSCBC
T ss_pred chhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHH----------HHHHHHhcCCC-----CCCcC
Confidence 999999988888754 45899999999998765431111 11110 01111111111 11345
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.+|+|++++.++.+.+.- -.|++..+.+|
T Consensus 230 pedvA~~v~fL~Sd~s~~-iTG~~i~VDGG 258 (297)
T d1yxma1 230 PEEVSSVVCFLLSPAASF-ITGQSVDVDGG 258 (297)
T ss_dssp THHHHHHHHHHHSGGGTT-CCSCEEEESTT
T ss_pred HHHHHHHHHHHhCchhcC-cCCcEEEeCcC
Confidence 789999999888643322 23789999887
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.53 E-value=4.5e-14 Score=139.46 Aligned_cols=225 Identities=14% Similarity=0.177 Sum_probs=142.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++-||++++++|++.| .+|++..|++. +++ + +.++. ..++..
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~G---a~V~i~~r~~~------~l~-~---------~~~~~--------~~~~~~ 55 (276)
T d1bdba_ 3 LKGEAVLITGGASGLGRALVDRFVAEG---AKVAVLDKSAE------RLA-E---------LETDH--------GDNVLG 55 (276)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHH------HHH-H---------HHHHH--------GGGEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHH------HHH-H---------HHHHc--------CCCeeE
Confidence 589999999999999999999999999 67888888642 222 1 11121 257889
Q ss_pred EeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc--------c----ccHHHHHHHhHHHHHHHHHHHHH
Q 008324 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF--------D----ERYDVAFGINTLGVIHLVNFAKK 150 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f--------~----~~~~~~~~~Nv~gt~~ll~la~~ 150 (570)
+.+|++++ +..+.+ +..+|++||+||...+ . +.++..+++|+.|+..+.+.+..
T Consensus 56 ~~~Dv~~~-------~~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p 128 (276)
T d1bdba_ 56 IVGDVRSL-------EDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLP 128 (276)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EecccccH-------HHHHHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHH
Confidence 99999953 323333 3469999999996432 1 23678899999999999887754
Q ss_pred -c-cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 008324 151 -C-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (570)
Q Consensus 151 -~-~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
| ++-.++|.+||....-.. +..
T Consensus 129 ~m~~~~g~iI~i~S~~~~~~~--------------------------------------------------------~~~ 152 (276)
T d1bdba_ 129 ALVASRGNVIFTISNAGFYPN--------------------------------------------------------GGG 152 (276)
T ss_dssp HHHHHTCEEEEECCGGGTSTT--------------------------------------------------------SSC
T ss_pred HHHhcCCCceeeeechhccCC--------------------------------------------------------CCC
Confidence 2 222578888775432111 113
Q ss_pred chHHHHHHHHHHHHHHh----ccCCcEEEEecCceecCCCCCCCccccCcc-chHHHHHHHhcCCceeeecCCCeeeeee
Q 008324 229 NTYVFTKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLK-TINTLFVASAQGNLRCLVGETKVIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~lv~~~----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~-~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.. .+++++..|.|+.|-.+...+...+...-. ........+....+ ..-+.
T Consensus 153 ~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~P---------lgR~g 223 (276)
T d1bdba_ 153 PLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLP---------IGRMP 223 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCT---------TSSCC
T ss_pred chHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCC---------CCCCc
Confidence 46999999988887654 456999999999997765433222111100 00011111111110 11134
Q ss_pred ehHHHHHHHHHHHH-HhhCCCCCCceEEecCC
Q 008324 304 PVDMVVNAMIVAMV-AHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~-~~~~~~~~~~iyni~s~ 334 (570)
..+|+|++++..+. ..+.- -.|+++++.+|
T Consensus 224 ~peeva~~v~fL~S~~~a~~-itG~~i~VDGG 254 (276)
T d1bdba_ 224 EVEEYTGAYVFFATRGDAAP-ATGALLNYDGG 254 (276)
T ss_dssp CGGGGSHHHHHHHCHHHHTT-CSSCEEEESSS
T ss_pred CHHHHHHHHHHHcCCcccCC-eeCcEEEECcC
Confidence 46889999887663 22222 23788988877
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.53 E-value=9.7e-14 Score=135.03 Aligned_cols=220 Identities=14% Similarity=0.168 Sum_probs=145.4
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
-++||+++||||++-||++++++|++.| .+|++..|++.. .+.+.++ ... ..++.
T Consensus 3 rL~gK~alVTGas~GIG~aia~~la~~G---a~V~~~~r~~~~---~~~~~~~-------------~~~------~~~~~ 57 (251)
T d1zk4a1 3 RLDGKVAIITGGTLGIGLAIATKFVEEG---AKVMITGRHSDV---GEKAAKS-------------VGT------PDQIQ 57 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH-------------HCC------TTTEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHH-------------hCC------CCcEE
Confidence 4789999999999999999999999999 678888886422 2222211 111 35788
Q ss_pred EEeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-cc-
Q 008324 89 FVPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-CV- 152 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~~- 152 (570)
++.+|++++ +..+.+ +..+|++||+|+.... .+.++..+++|+.|+..+.+.+.. |.
T Consensus 58 ~~~~Dv~~~-------~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~ 130 (251)
T d1zk4a1 58 FFQHDSSDE-------DGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKN 130 (251)
T ss_dssp EEECCTTCH-------HHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred EEEccCCCH-------HHHHHHHHHHHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHh
Confidence 999999953 333333 2468999999997532 255778899999999999887654 32
Q ss_pred -Cc-eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 153 -KL-KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 153 -~l-~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
+- .++|.+||....... +....
T Consensus 131 ~~~gg~Ii~isS~~~~~~~--------------------------------------------------------~~~~~ 154 (251)
T d1zk4a1 131 KGLGASIINMSSIEGFVGD--------------------------------------------------------PSLGA 154 (251)
T ss_dssp SSSCEEEEEECCGGGTSCC--------------------------------------------------------TTCHH
T ss_pred cCCCCceEeeeccceeccC--------------------------------------------------------CCchh
Confidence 22 478999987533211 12357
Q ss_pred HHHHHHHHHHHHHHh-------ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeee
Q 008324 231 YVFTKTMGEMLMQQS-------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-------~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
|+.||+..+.+.+.. ..++.+..|.|+.|-.+..+..+ ..... ...... .+ ..-+.
T Consensus 155 Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~-------~~~~~-~~~~~~----~p-----l~R~~ 217 (251)
T d1zk4a1 155 YNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP-------GAEEA-MSQRTK----TP-----MGHIG 217 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST-------THHHH-HTSTTT----CT-----TSSCB
T ss_pred HHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcC-------CHHHH-HHHHhC----CC-----CCCCc
Confidence 999999988876642 34799999999998764332111 11110 000000 11 11245
Q ss_pred ehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
-.+|+|++++.++.+.+. --.|+++.+.+|
T Consensus 218 ~pedvA~~v~fL~S~~s~-~itG~~i~vDGG 247 (251)
T d1zk4a1 218 EPNDIAYICVYLASNESK-FATGSEFVVDGG 247 (251)
T ss_dssp CHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCchhC-CCcCcEEEECcc
Confidence 679999999988754332 223788888776
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.53 E-value=2.4e-13 Score=130.85 Aligned_cols=212 Identities=12% Similarity=0.068 Sum_probs=143.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++-||++++++|++.| .+|++..|++ +.+++ ....+
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~G---a~V~~~~r~~------~~l~~------------------------~~~~~ 48 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQEG---AEVTICARNE------ELLKR------------------------SGHRY 48 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHH------------------------TCSEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCH------HHHHh------------------------cCCcE
Confidence 589999999999999999999999999 6788888863 22221 23456
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--cCceEEEE
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--VKLKVFVH 159 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~l~~~V~ 159 (570)
+.+|+++. .+...+-+.++|++||+||.... .+.++..+++|+.|+..+.+.+.. | ++-.++|.
T Consensus 49 ~~~Dv~~~------~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~ 122 (234)
T d1o5ia_ 49 VVCDLRKD------LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVA 122 (234)
T ss_dssp EECCTTTC------HHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEcchHHH------HHHHHHHhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccc
Confidence 78999852 33333556789999999997532 245778899999999988887643 2 24457899
Q ss_pred EecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHH
Q 008324 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (570)
Q Consensus 160 vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE 239 (570)
+||....... +....|+.||+..+
T Consensus 123 i~S~~~~~~~--------------------------------------------------------~~~~~Y~asKaal~ 146 (234)
T d1o5ia_ 123 ITSFSVISPI--------------------------------------------------------ENLYTSNSARMALT 146 (234)
T ss_dssp ECCGGGTSCC--------------------------------------------------------TTBHHHHHHHHHHH
T ss_pred cccccccccc--------------------------------------------------------cccccchhHHHHHH
Confidence 8886533211 22357999999888
Q ss_pred HHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHH
Q 008324 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (570)
Q Consensus 240 ~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~ 314 (570)
.+.+.. ..++++..|.|+.|-.+..+. ..+ ........... ...-+.-.+|+|++++.
T Consensus 147 ~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~---~~~-----~~~~~~~~~~~---------pl~R~~~pediA~~v~f 209 (234)
T d1o5ia_ 147 GFLKTLSFEVAPYGITVNCVAPGWTETERVKE---LLS-----EEKKKQVESQI---------PMRRMAKPEEIASVVAF 209 (234)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH---HSC-----HHHHHHHHTTS---------TTSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCeEEeecccCccchhhhhh---hcC-----HHHHHHHHhcC---------CCCCCcCHHHHHHHHHH
Confidence 877654 458999999999886653211 000 01111111111 11124568899999998
Q ss_pred HHHHhhCCCCCCceEEecCC
Q 008324 315 AMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 315 a~~~~~~~~~~~~iyni~s~ 334 (570)
.+.+... --.|++..+.+|
T Consensus 210 L~S~~s~-~itG~~i~vDGG 228 (234)
T d1o5ia_ 210 LCSEKAS-YLTGQTIVVDGG 228 (234)
T ss_dssp HHSGGGT-TCCSCEEEESTT
T ss_pred HhChhhc-CCcCcEEEECcc
Confidence 8753332 223788888777
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.52 E-value=3.1e-14 Score=139.36 Aligned_cols=166 Identities=15% Similarity=0.171 Sum_probs=121.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++-||+++++.|++.| .+|++..|++.. .+.+.+++ ++ ...++.+
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~G---a~V~~~~r~~~~---l~~~~~~~---------~~---------~g~~~~~ 58 (260)
T d1zema1 3 FNGKVCLVTGAGGNIGLATALRLAEEG---TAIALLDMNREA---LEKAEASV---------RE---------KGVEARS 58 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHHH---------HT---------TTSCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHHH---------Hh---------cCCcEEE
Confidence 789999999999999999999999999 678888886432 22222111 11 1357889
Q ss_pred EeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHH-c--
Q 008324 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKK-C-- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~----f----~~~~~~~~~~Nv~gt~~ll~la~~-~-- 151 (570)
+.+|++++ +..+.+ +..+|++||+||... + .+.++..+++|+.|+..+.+.+.. |
T Consensus 59 ~~~Dv~~~-------~~v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~ 131 (260)
T d1zema1 59 YVCDVTSE-------EAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMIT 131 (260)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEccCCCH-------HHHHHHHHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhh
Confidence 99999953 323333 246999999999652 2 245778899999999999887754 3
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
++-.++|++||....... +....|
T Consensus 132 ~~~G~II~isS~~~~~~~--------------------------------------------------------~~~~~Y 155 (260)
T d1zema1 132 QNYGRIVNTASMAGVKGP--------------------------------------------------------PNMAAY 155 (260)
T ss_dssp HTCEEEEEECCHHHHSCC--------------------------------------------------------TTBHHH
T ss_pred hcCCCCCeeechhhccCC--------------------------------------------------------cchHHH
Confidence 245689999997543221 113479
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecC
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGT 262 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
+.||+..+.+.+.. ..++++..|.|+.|-.+
T Consensus 156 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~ 191 (260)
T d1zema1 156 GTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG 191 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred HHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCc
Confidence 99999999888754 45799999999998765
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.52 E-value=1.1e-13 Score=134.91 Aligned_cols=222 Identities=15% Similarity=0.086 Sum_probs=144.9
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
-++||+++||||++-||++++++|++.| .+|++..|++. ..+.+. ++. ..+..
T Consensus 3 rL~gK~alITGas~GIG~aia~~la~~G---a~V~~~~~~~~---~~~~~~-------------~~~--------~~~~~ 55 (253)
T d1hxha_ 3 RLQGKVALVTGGASGVGLEVVKLLLGEG---AKVAFSDINEA---AGQQLA-------------AEL--------GERSM 55 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEECSCHH---HHHHHH-------------HHH--------CTTEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHH---HHHHHH-------------HHh--------CCCeE
Confidence 4799999999999999999999999999 67888887542 122222 121 35778
Q ss_pred EEeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-cc-
Q 008324 89 FVPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-CV- 152 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~~- 152 (570)
++.+|++++ +..+.+ +..+|++||+||.... .+.++..+++|+.|+..+.+.+.. |+
T Consensus 56 ~~~~Dv~~~-------~~~~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~ 128 (253)
T d1hxha_ 56 FVRHDVSSE-------ADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKE 128 (253)
T ss_dssp EECCCTTCH-------HHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred EEEeecCCH-------HHHHHHHHHHHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHh
Confidence 899999953 222333 2468999999997532 255788899999999999887765 32
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|++||....... +....|+
T Consensus 129 ~~G~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 152 (253)
T d1hxha_ 129 TGGSIINMASVSSWLPI--------------------------------------------------------EQYAGYS 152 (253)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTBHHHH
T ss_pred cCCceecccchhhhcCc--------------------------------------------------------ccccccc
Confidence 34689999987543211 1235799
Q ss_pred HHHHHHHHHHHHh-----c--cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 233 FTKTMGEMLMQQS-----K--ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~--~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
.||+..+.+.+.. . .++++..|-|+.|-.+..+. ..+. ..... ...... .....-.+...
T Consensus 153 asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~---~~~~-~~~~~----~~~~~~-----~~~~~gr~~~p 219 (253)
T d1hxha_ 153 ASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQA---SLPK-GVSKE----MVLHDP-----KLNRAGRAYMP 219 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHH---HSCT-TCCHH----HHBCBT-----TTBTTCCEECH
T ss_pred chhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHh---hCcc-hhhHH----HHHhCc-----cccccCCCCCH
Confidence 9999888887643 2 35899999999987642110 0000 00000 000000 00011235667
Q ss_pred HHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|+|++++..+.+.+. --.|++.++.+|
T Consensus 220 edvA~~v~fL~S~~s~-~itG~~i~VDGG 247 (253)
T d1hxha_ 220 ERIAQLVLFLASDESS-VMSGSELHADNS 247 (253)
T ss_dssp HHHHHHHHHHHSGGGT-TCCSCEEEESSS
T ss_pred HHHHHHHHHHhChhhC-CCcCcEEEECcc
Confidence 9999999988864332 223788888766
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.51 E-value=5.9e-14 Score=138.26 Aligned_cols=232 Identities=12% Similarity=0.110 Sum_probs=143.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++-||++++++|++.| .+|++..|++.. .+.+.+++ ++... ...++.+
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~G---a~V~l~~r~~~~---l~~~~~~l---------~~~~~------~~~~~~~ 61 (272)
T d1xkqa_ 3 FSNKTVIITGSSNGIGRTTAILFAQEG---ANVTITGRSSER---LEETRQII---------LKSGV------SEKQVNS 61 (272)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHHH---------HTTTC------CGGGEEE
T ss_pred CCCCEEEEeCcCcHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHHH---------HhcCC------CCCceEE
Confidence 789999999999999999999999999 678899886532 22222222 11110 1257899
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc--------cc---cHHHHHHHhHHHHHHHHHHHHHc
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DE---RYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f--------~~---~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
+.+|++++ +..+.++ .++|++||+||.... +. .++..+++|+.|+..+.+.+...
T Consensus 62 ~~~Dvs~~-------~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~ 134 (272)
T d1xkqa_ 62 VVADVTTE-------DGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPH 134 (272)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred EEccCCCH-------HHHHHHHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccc
Confidence 99999953 3333332 369999999997531 11 36778899999999998877653
Q ss_pred --cCceEEEEEecc-eeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 008324 152 --VKLKVFVHVSTA-YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (570)
Q Consensus 152 --~~l~~~V~vSTa-~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
++-..+|.++|. ...... +..
T Consensus 135 m~~~~g~iI~~~Ss~a~~~~~--------------------------------------------------------~~~ 158 (272)
T d1xkqa_ 135 LVASKGEIVNVSSIVAGPQAQ--------------------------------------------------------PDF 158 (272)
T ss_dssp HHHHTCEEEEECCGGGSSSCC--------------------------------------------------------CSS
T ss_pred ccccCCccccccchhccccCC--------------------------------------------------------CCc
Confidence 122356665553 211110 123
Q ss_pred chHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeee
Q 008324 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.. ..++++..|.||.|-.+..+.....-................ .+. .-+.
T Consensus 159 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~----~Pl-----gR~g 229 (272)
T d1xkqa_ 159 LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKEC----IPI-----GAAG 229 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT----CTT-----SSCB
T ss_pred chhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcC----CCC-----CCCc
Confidence 56999999998887754 457999999999987643321110000000001111111111 111 1134
Q ss_pred ehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
-.+|+|++++.++.+....--.|+++.+.+|
T Consensus 230 ~pediA~~v~fL~S~~as~~iTG~~i~vDGG 260 (272)
T d1xkqa_ 230 KPEHIANIILFLADRNLSFYILGQSIVADGG 260 (272)
T ss_dssp CHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCcchhCCccCeEEEeCcC
Confidence 5789999999887533222123788888877
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.51 E-value=2e-13 Score=133.54 Aligned_cols=227 Identities=14% Similarity=0.159 Sum_probs=145.7
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
|+||++|||||++.||++++++|++.| .+|++..|+...... ..+++ .++. ..++.+
T Consensus 7 l~gK~alITGas~GIG~aia~~la~~G---a~V~i~~r~~~~~~~---~~~~~---------~~~~--------g~~~~~ 63 (260)
T d1h5qa_ 7 FVNKTIIVTGGNRGIGLAFTRAVAAAG---ANVAVIYRSAADAVE---VTEKV---------GKEF--------GVKTKA 63 (260)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTT---EEEEEEESSCTTHHH---HHHHH---------HHHH--------TCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHH---HHHHH---------HHHh--------CCceEE
Confidence 789999999999999999999999999 788999998754321 11111 1111 357889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c---
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--- 151 (570)
+.+|++++ +..+.++ ..+|++||+|+.... .+.++..+++|+.|+..+.+.+.. |
T Consensus 64 ~~~Dv~~~-------~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~ 136 (260)
T d1h5qa_ 64 YQCDVSNT-------DIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQK 136 (260)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEccCCCH-------HHHHHHHHHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhccccccc
Confidence 99999953 3333333 369999999987532 245778899999999998876643 2
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
..-..++.+|+..........+ .. ......|
T Consensus 137 ~~~g~i~~~~s~~~~~~~~~~~--~~-----------------------------------------------~~~~~~Y 167 (260)
T d1h5qa_ 137 QQKGSIVVTSSMSSQIINQSSL--NG-----------------------------------------------SLTQVFY 167 (260)
T ss_dssp TCCEEEEEECCGGGTSCCEEET--TE-----------------------------------------------ECSCHHH
T ss_pred ccceEEEEeecccccccccccc--cc-----------------------------------------------Cccccch
Confidence 2334555566554332211000 00 0123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.. ..++++..|.||.|-.+..... + ...........+ . .-+.-.+
T Consensus 168 ~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~----~-----~~~~~~~~~~~p----l-----~R~g~pe 229 (260)
T d1h5qa_ 168 NSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM----D-----KKIRDHQASNIP----L-----NRFAQPE 229 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS----C-----HHHHHHHHHTCT----T-----SSCBCGG
T ss_pred hhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhcc----C-----HHHHHHHHhcCC----C-----CCCcCHH
Confidence 99999999988754 4689999999999866433211 1 111222221111 0 1134468
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|++++.++.+.+.- -.|+++.+.+|
T Consensus 230 dvA~~v~fL~S~~s~~-itG~~i~VDGG 256 (260)
T d1h5qa_ 230 EMTGQAILLLSDHATY-MTGGEYFIDGG 256 (260)
T ss_dssp GGHHHHHHHHSGGGTT-CCSCEEEECTT
T ss_pred HHHHHHHHHhcchhCC-CcCceEEECCC
Confidence 8999998887543322 23788888776
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.51 E-value=1.1e-13 Score=136.42 Aligned_cols=232 Identities=12% Similarity=0.120 Sum_probs=144.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++-||++++++|++.| .+|++..|++.. .+.+.+++ .+... ...++..
T Consensus 2 L~gK~alITGas~GIG~aia~~la~~G---a~V~~~~r~~~~---l~~~~~~i---------~~~~~------~~~~~~~ 60 (274)
T d1xhla_ 2 FSGKSVIITGSSNGIGRSAAVIFAKEG---AQVTITGRNEDR---LEETKQQI---------LKAGV------PAEKINA 60 (274)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHHH---------HHTTC------CGGGEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHHH---------HHcCC------CCcceEE
Confidence 689999999999999999999999999 678888886432 22222222 11111 1257899
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-----c----ccHHHHHHHhHHHHHHHHHHHHHc--
Q 008324 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-----D----ERYDVAFGINTLGVIHLVNFAKKC-- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-----~----~~~~~~~~~Nv~gt~~ll~la~~~-- 151 (570)
+.+|+++ ++..+.++ ..+|+++|+||.... . +.++..+++|+.|+..+.+.+...
T Consensus 61 ~~~Dv~~-------~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~ 133 (274)
T d1xhla_ 61 VVADVTE-------ASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLI 133 (274)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEeeCCC-------HHHHHHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhccccccccccccccccc
Confidence 9999995 33333332 368999999986421 1 346778999999999998877652
Q ss_pred -cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+-..++.+||....... +....
T Consensus 134 ~~~~g~ii~~ss~~~~~~~--------------------------------------------------------~~~~~ 157 (274)
T d1xhla_ 134 KTKGEIVNVSSIVAGPQAH--------------------------------------------------------SGYPY 157 (274)
T ss_dssp HTTCEEEEECCGGGSSSCC--------------------------------------------------------TTSHH
T ss_pred ccccccccchhhhhccccC--------------------------------------------------------CCCce
Confidence 234566666664322111 11246
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..+.+.+.. ..++++..|.||.|-.+..+.....-.........+...... .| ..-+...
T Consensus 158 Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~----iP-----lgR~g~p 228 (274)
T d1xhla_ 158 YACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKEC----IP-----VGHCGKP 228 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT----CT-----TSSCBCH
T ss_pred ehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcC----CC-----CCCCcCH
Confidence 999999999888754 458999999999997643211100000000001111111111 11 0113457
Q ss_pred HHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|+|++++.++......--.|++..+.+|
T Consensus 229 ediA~~v~fL~S~d~s~~itG~~i~vDGG 257 (274)
T d1xhla_ 229 EEIANIIVFLADRNLSSYIIGQSIVADGG 257 (274)
T ss_dssp HHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred HHHHHHHHHHcCCccccCccCcEEEeCcC
Confidence 99999999887422222123788988877
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.50 E-value=2.5e-13 Score=132.43 Aligned_cols=220 Identities=16% Similarity=0.161 Sum_probs=140.5
Q ss_pred cCCCEEEEECCcc--hhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 10 LENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaTG--FlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||+++||||+| -||++++++|++.| .+|++..|+.+.....+... .. ..+.
T Consensus 6 L~gK~alITGas~~~GIG~aiA~~la~~G---a~V~i~~~~~~~~~~~~~~~-------------~~---------~~~~ 60 (256)
T d1ulua_ 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAG---AEVALSYQAERLRPEAEKLA-------------EA---------LGGA 60 (256)
T ss_dssp CTTCEEEEESCCCSSSHHHHHHHHHHHTT---CEEEEEESSGGGHHHHHHHH-------------HH---------TTCC
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCC---CEEEEEeCcHHHHHHHHHhh-------------hc---------cCcc
Confidence 6899999999997 69999999999999 67777777643322222111 11 2466
Q ss_pred EEEeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCC-------c----cccHHHHHHHhHHHHHHHHHHHH
Q 008324 88 TFVPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITK-------F----DERYDVAFGINTLGVIHLVNFAK 149 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~-------f----~~~~~~~~~~Nv~gt~~ll~la~ 149 (570)
.++.+|++++ +..+.+ +..+|++||+|+... + .+.++..+++|+.++..+.+.+.
T Consensus 61 ~~~~~D~~~~-------~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~ 133 (256)
T d1ulua_ 61 LLFRADVTQD-------EELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAE 133 (256)
T ss_dssp EEEECCTTCH-------HHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHT
T ss_pred cccccccCCH-------HHHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHH
Confidence 7899999953 323333 246999999998642 1 13356678999999999988876
Q ss_pred Hc-cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 008324 150 KC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (570)
Q Consensus 150 ~~-~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
.. ++-.++|.+||....... +..
T Consensus 134 ~~~~~~G~Iv~isS~~~~~~~--------------------------------------------------------~~~ 157 (256)
T d1ulua_ 134 PLLREGGGIVTLTYYASEKVV--------------------------------------------------------PKY 157 (256)
T ss_dssp TTEEEEEEEEEEECGGGTSBC--------------------------------------------------------TTC
T ss_pred HHhccCCEEEEEeehHhcCCC--------------------------------------------------------CCc
Confidence 53 333578999887543221 123
Q ss_pred chHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeee
Q 008324 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.. ..++++..+.|+.|..+.....+.. ........+.. +- .-+.
T Consensus 158 ~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~-------~~~~~~~~~~~----pl-----~R~~ 221 (256)
T d1ulua_ 158 NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGF-------TKMYDRVAQTA----PL-----RRNI 221 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------C-------HHHHHHHHHHS----TT-----SSCC
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhh-------HHHHHHHHhcC----CC-----CCCc
Confidence 57999999999988754 5589999999999877544322111 11111111111 00 1134
Q ss_pred ehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
..+|+|++++.++.+.+.- -.|+++.+.+|
T Consensus 222 ~pedvA~~v~fL~S~~s~~-itG~~i~VDGG 251 (256)
T d1ulua_ 222 TQEEVGNLGLFLLSPLASG-ITGEVVYVDAG 251 (256)
T ss_dssp CHHHHHHHHHHHHSGGGTT-CCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCchhCC-ccCCeEEECcC
Confidence 5689999999888643322 23788888776
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=6e-14 Score=136.79 Aligned_cols=228 Identities=16% Similarity=0.224 Sum_probs=146.6
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+||++|||||++-||++++++|++.| .+|++..|+.... +...+++ .+..+ ..++.++
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~G---a~V~i~~r~~~~~---~~~~~~l---------~~~~~-------~~~~~~~ 59 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKG---AKVALVDWNLEAG---VQCKAAL---------HEQFE-------PQKTLFI 59 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------TTTSC-------GGGEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHH---------HHhcC-------CCcEEEE
Confidence 69999999999999999999999999 6888888865321 1111111 11111 2578899
Q ss_pred eccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHH-ccC-----ceEE
Q 008324 91 PGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKK-CVK-----LKVF 157 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~-~~~-----l~~~ 157 (570)
.+|++++ +..+.++ ..+|++||+|+... .++++..+++|+.++.++.+++.+ +.. -.++
T Consensus 60 ~~Dv~~~-------~~v~~~~~~~~~~~G~iDilVnnAg~~~-~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~I 131 (254)
T d2gdza1 60 QCDVADQ-------QQLRDTFRKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGII 131 (254)
T ss_dssp ECCTTSH-------HHHHHHHHHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEE
T ss_pred EeecCCH-------HHHHHHHHHHHHHcCCcCeecccccccc-cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEE
Confidence 9999953 3333332 46999999999854 466888999999999988877754 221 2469
Q ss_pred EEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHH
Q 008324 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (570)
Q Consensus 158 V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~ 237 (570)
|.+||....... +....|+.||+.
T Consensus 132 v~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa 155 (254)
T d2gdza1 132 INMSSLAGLMPV--------------------------------------------------------AQQPVYCASKHG 155 (254)
T ss_dssp EEECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHH
T ss_pred EeeccHhhccCC--------------------------------------------------------CCccchHHHHHH
Confidence 999987543211 123579999998
Q ss_pred HHHHHHH------h-ccCCcEEEEecCceecCCCCCCCc---cccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 238 GEMLMQQ------S-KENLSLVIIRPTVVSGTYKEPFPG---WVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 238 aE~lv~~------~-~~~lp~~IvRPsiV~g~~~ep~~g---w~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.+.+.+. + ..++++..|.|+.|-.+..+..+. ..........+......| -+...+|
T Consensus 156 l~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-------------r~~~ped 222 (254)
T d2gdza1 156 IVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYY-------------GILDPPL 222 (254)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHH-------------CCBCHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCC-------------CCcCHHH
Confidence 8887652 2 457999999999986543211110 000000001111111001 1234689
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCCCCCcccHH
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLV 342 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~~~~pit~~ 342 (570)
+|++++.++.+.. -.|++..+.+| ..+.|+
T Consensus 223 vA~~v~fL~s~~~---itG~~i~VdGG--~~~~~~ 252 (254)
T d2gdza1 223 IANGLITLIEDDA---LNGAIMKITTS--KGIHFQ 252 (254)
T ss_dssp HHHHHHHHHHCTT---CSSCEEEEETT--TEEEEC
T ss_pred HHHHHHHHHcCCC---CCCCEEEECCC--Ceeecc
Confidence 9999999886432 24789999887 555544
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.50 E-value=5.7e-14 Score=137.21 Aligned_cols=227 Identities=14% Similarity=0.099 Sum_probs=146.3
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.||.+|||||++-||++++++|++.| .+|++..|++.. .+.+.+++ ++ ...++.++
T Consensus 1 DgKValITGas~GIG~aia~~la~~G---a~V~i~~r~~~~---l~~~~~~l---------~~---------~g~~~~~~ 56 (257)
T d2rhca1 1 DSEVALVTGATSGIGLEIARRLGKEG---LRVFVCARGEEG---LRTTLKEL---------RE---------AGVEADGR 56 (257)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHHH---------HH---------TTCCEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHHH---------Hh---------cCCcEEEE
Confidence 37999999999999999999999999 678888886422 22222121 11 13578899
Q ss_pred eccCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc-----
Q 008324 91 PGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC----- 151 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~----- 151 (570)
.+|++++ +..+.++ ..+|++||+||.... .+.++..+++|+.|+..+.+.+...
T Consensus 57 ~~Dvs~~-------~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~ 129 (257)
T d2rhca1 57 TCDVRSV-------PEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLE 129 (257)
T ss_dssp ECCTTCH-------HHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHH
T ss_pred EeecCCH-------HHHHHHHHHHHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHh
Confidence 9999954 3333332 369999999997642 2557888999999999999988642
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
++-.++|.+||....... +....|
T Consensus 130 ~~~g~Ii~i~S~~~~~~~--------------------------------------------------------~~~~~Y 153 (257)
T d2rhca1 130 RGTGRIVNIASTGGKQGV--------------------------------------------------------VHAAPY 153 (257)
T ss_dssp HTEEEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred cCCccccccccccccccc--------------------------------------------------------ccchhH
Confidence 244578888887543221 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCC-ccccCc-cchHHHHHHHhcCCceeeecCCCeeeeeee
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFP-GWVEDL-KTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~-gw~~~~-~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
+.||+..+.+.+.. ..++++..|.|+.|-.+..+... .+.+.. .........+....+ ..-+.-
T Consensus 154 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~P---------lgR~~~ 224 (257)
T d2rhca1 154 SASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVP---------IGRYVQ 224 (257)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTST---------TSSCBC
T ss_pred HHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCC---------CCCCcC
Confidence 99999998888754 45799999999988653221000 000000 011112222222111 012355
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.+|+|++++.++.+.+. --.|+++.+.+|
T Consensus 225 pedia~~v~fL~S~~s~-~itG~~i~vDGG 253 (257)
T d2rhca1 225 PSEVAEMVAYLIGPGAA-AVTAQALNVCGG 253 (257)
T ss_dssp HHHHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHHhCchhc-CCcCceEEECcC
Confidence 78999999988854332 223788888777
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.49 E-value=9.6e-14 Score=135.40 Aligned_cols=225 Identities=14% Similarity=0.069 Sum_probs=142.2
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|.++||||++-||++++++|++.| .+|++..|++.. .+.+.+++ ++ ...++.++.+
T Consensus 2 KValITGas~GIG~aia~~la~~G---a~V~~~~r~~~~---l~~~~~~i---------~~---------~g~~~~~~~~ 57 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDG---FAVAIADYNDAT---AKAVASEI---------NQ---------AGGHAVAVKV 57 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHHH---------HH---------TTCCEEEEEC
T ss_pred CEEEEcCCccHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHHH---------Hh---------cCCcEEEEEe
Confidence 456999999999999999999999 678888886432 22222121 11 1357889999
Q ss_pred cCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c---cCc
Q 008324 93 DISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C---VKL 154 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~---~~l 154 (570)
|++++ +..+.+ +..+|++||+||.... .+.++..+++|+.|+.++.+.+.. + ++-
T Consensus 58 Dv~~~-------~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~ 130 (255)
T d1gega_ 58 DVSDR-------DQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHG 130 (255)
T ss_dssp CTTSH-------HHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC
T ss_pred eCCCH-------HHHHHHHHHHHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccc
Confidence 99953 333333 2469999999997542 255788899999999999887643 2 234
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|.+||....... +....|+.|
T Consensus 131 g~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 154 (255)
T d1gega_ 131 GKIINACSQAGHVGN--------------------------------------------------------PELAVYSSS 154 (255)
T ss_dssp EEEEEECCGGGTSCC--------------------------------------------------------TTBHHHHHH
T ss_pred cccccccchhhcccC--------------------------------------------------------cccccchhC
Confidence 568888886543211 123579999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCcccc-Cc-cchHHHHHHHhcCCceeeecCCCeeeeeeehHH
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVE-DL-KTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~-~~-~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
|+..+.+.+.. ..++++..+.||.|-.+..+....... .. .........+.+.. + ..-+...+|
T Consensus 155 Kaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p-----l~R~~~pee 225 (255)
T d1gega_ 155 KFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRI----T-----LGRLSEPED 225 (255)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTC----T-----TCSCBCHHH
T ss_pred HHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcC----C-----CCCCcCHHH
Confidence 99998888754 458999999999886532110000000 00 00000111111111 0 112355799
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|+++..++.+.+. --.|+++.+.+|
T Consensus 226 vA~~v~fL~S~~a~-~itG~~i~vDGG 251 (255)
T d1gega_ 226 VAACVSYLASPDSD-YMTGQSLLIDGG 251 (255)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESSS
T ss_pred HHHHHHHHhCchhC-CccCcEEEecCC
Confidence 99999988864332 223788888776
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.49 E-value=2.4e-13 Score=132.73 Aligned_cols=204 Identities=21% Similarity=0.186 Sum_probs=138.5
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
+|=.+++|+||||+|.||++++++|++.|. .+|+++.|+.......+.+.+++ +. ...++
T Consensus 5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga--~~vvl~~R~~~~~~~~~~~~~~l---------~~---------~g~~v 64 (259)
T d2fr1a1 5 EWKPTGTVLVTGGTGGVGGQIARWLARRGA--PHLLLVSRSGPDADGAGELVAEL---------EA---------LGART 64 (259)
T ss_dssp CCCCCSEEEEETTTSHHHHHHHHHHHHHTC--SEEEEEESSGGGSTTHHHHHHHH---------HH---------TTCEE
T ss_pred ccCCcCEEEEECCCcHHHHHHHHHHHHCCC--CEEEEEeCCccCHHHHHHHHHHH---------Hh---------ccccc
Confidence 466788999999999999999999999984 35788888754443333332222 11 13578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhC------CccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHccCc
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELWN------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKCVKL 154 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~------~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~~~l 154 (570)
.++.+|+++ .+..+.+.+ .+|.|||+|+.... .+.++..+++|+.|+.++.++.... +.
T Consensus 65 ~~~~~Dv~d-------~~~~~~~~~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~-~~ 136 (259)
T d2fr1a1 65 TVAACDVTD-------RESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DL 136 (259)
T ss_dssp EEEECCTTC-------HHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CC
T ss_pred cccccccch-------HHHHHHhhccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhcc-CC
Confidence 999999995 333444443 38899999998643 1345667889999999999887764 66
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|.+||........ ....|+.+
T Consensus 137 ~~iv~~SS~a~~~g~~--------------------------------------------------------~~~~YaAa 160 (259)
T d2fr1a1 137 TAFVLFSSFASAFGAP--------------------------------------------------------GLGGYAPG 160 (259)
T ss_dssp SEEEEEEEHHHHTCCT--------------------------------------------------------TCTTTHHH
T ss_pred ceEeeecchhhccCCc--------------------------------------------------------ccHHHHHH
Confidence 7899999876432211 12469999
Q ss_pred HHHHHHHHHHh-ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHH
Q 008324 235 KTMGEMLMQQS-KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (570)
Q Consensus 235 K~~aE~lv~~~-~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii 313 (570)
|+..|.+..+. ..+++++.|.|+.+.++.. .+. .+.. .+ - ..-...++.+++++++.
T Consensus 161 ka~l~~la~~~~~~Gi~v~~I~pg~~~~~g~------~~~------~~~~----~~---~---~~G~~~~~~~~~~~~l~ 218 (259)
T d2fr1a1 161 NAYLDGLAQQRRSDGLPATAVAWGTWAGSGM------AEG------PVAD----RF---R---RHGVIEMPPETACRALQ 218 (259)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEECCBC----------------------------C---T---TTTEECBCHHHHHHHHH
T ss_pred HHhHHHHHHHHHhCCCCEEECCCCcccCCcc------ccc------hHHH----HH---H---hcCCCCCCHHHHHHHHH
Confidence 99999988776 6789999999998765321 111 0000 00 0 01134578899999988
Q ss_pred HHHH
Q 008324 314 VAMV 317 (570)
Q Consensus 314 ~a~~ 317 (570)
.++.
T Consensus 219 ~~l~ 222 (259)
T d2fr1a1 219 NALD 222 (259)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8775
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.48 E-value=1.3e-13 Score=133.32 Aligned_cols=215 Identities=14% Similarity=0.124 Sum_probs=142.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++|||||+.||+.++++|++.| .+|++..|+.+.. +... ++ ...++.+
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~---~~~~-------------~~--------~~~~~~~ 55 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFAREG---ASLVAVDREERLL---AEAV-------------AA--------LEAEAIA 55 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHH-------------HT--------CCSSEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHH-------------HH--------cCCceEE
Confidence 689999999999999999999999999 7888888865321 1111 11 1367889
Q ss_pred EeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHHc-cCc
Q 008324 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~l 154 (570)
+++|++++ +..+.+ +.++|++||+|+.... .+.++..+++|+.++..+.+++... .+-
T Consensus 56 ~~~Dls~~-------~~i~~~~~~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~ 128 (241)
T d2a4ka1 56 VVADVSDP-------KAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG 128 (241)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT
T ss_pred EEecCCCH-------HHHHHHHHHHHHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccc
Confidence 99999953 333332 2469999999987532 2457788999999999999887653 344
Q ss_pred eEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 155 ~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
..++.+||.+.... +....|+.+
T Consensus 129 ~~i~~~ss~a~~~~---------------------------------------------------------~~~~~Y~~s 151 (241)
T d2a4ka1 129 GSLVLTGSVAGLGA---------------------------------------------------------FGLAHYAAG 151 (241)
T ss_dssp CEEEEECCCTTCCH---------------------------------------------------------HHHHHHHHC
T ss_pred cceeeccccccccc---------------------------------------------------------cCccccchh
Confidence 45555555432110 002469999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHH
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..|.+.+.. ..++++..+.||.|-.+..+..+ ........+.. + .--+.-.||+|
T Consensus 152 K~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~---------~~~~~~~~~~~----p-----~~r~~~p~dva 213 (241)
T d2a4ka1 152 KLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLP---------PWAWEQEVGAS----P-----LGRAGRPEEVA 213 (241)
T ss_dssp SSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSC---------HHHHHHHHHTS----T-----TCSCBCHHHHH
T ss_pred hHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhh---------HhHHHHHHhCC----C-----CCCCcCHHHHH
Confidence 99999988755 45799999999998654332111 11122221111 0 11234679999
Q ss_pred HHHHHHHHHhhCCCCCCceEEecCC
Q 008324 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+++..++.+...-- .|++..+.+|
T Consensus 214 ~~v~fL~S~~s~~i-tG~~i~vDGG 237 (241)
T d2a4ka1 214 QAALFLLSEESAYI-TGQALYVDGG 237 (241)
T ss_dssp HHHHHHHSGGGTTC-CSCEEEESTT
T ss_pred HHHHHHhcchhCCC-cCceEEeCCC
Confidence 99999886433222 3677877776
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=3.1e-13 Score=131.87 Aligned_cols=209 Identities=16% Similarity=0.140 Sum_probs=136.1
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
+.|+||++|||||++-||++++++|++.| .+|++..|+... .+.+.++ +++..+ ..++
T Consensus 6 ~~lk~Kv~lITGas~GIG~aiA~~la~~G---~~Vv~~~r~~~~---l~~~~~~---------l~~~~~-------~~~~ 63 (257)
T d1xg5a_ 6 ERWRDRLALVTGASGGIGAAVARALVQQG---LKVVGCARTVGN---IEELAAE---------CKSAGY-------PGTL 63 (257)
T ss_dssp GGGTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH---------HHHTTC-------SSEE
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHH---------HHhcCC-------CceE
Confidence 45999999999999999999999999999 678888886422 2222212 222211 2578
Q ss_pred EEEeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c-
Q 008324 88 TFVPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C- 151 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~- 151 (570)
.++.+|++++ +..+.+ +..+|++||+|+.... .+.++..+++|+.|+..+.+.+.+ +
T Consensus 64 ~~~~~Dls~~-------~~v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~ 136 (257)
T d1xg5a_ 64 IPYRCDLSNE-------EDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMK 136 (257)
T ss_dssp EEEECCTTCH-------HHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEEEccCCCH-------HHHHHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHH
Confidence 8999999953 323332 3469999999997642 356788899999999988777643 2
Q ss_pred --c-CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 008324 152 --V-KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (570)
Q Consensus 152 --~-~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
+ +-.++|.+||........ + ...
T Consensus 137 ~~~~~~g~Ii~isS~~~~~~~p-------~-----------------------------------------------~~~ 162 (257)
T d1xg5a_ 137 ERNVDDGHIININSMSGHRVLP-------L-----------------------------------------------SVT 162 (257)
T ss_dssp HTTCCSCEEEEECCGGGTSCCS-------C-----------------------------------------------GGG
T ss_pred HhccCCCceEEEechHhcCCCC-------C-----------------------------------------------ccc
Confidence 1 235899999876432110 0 012
Q ss_pred chHHHHHHHHHHHHHHh-------ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeee
Q 008324 229 NTYVFTKTMGEMLMQQS-------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMD 301 (570)
Q Consensus 229 n~Y~~sK~~aE~lv~~~-------~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d 301 (570)
..|+.+|+..+.+.+.. ..++.+..+-|+.+-.+.... +.+. .......... ...
T Consensus 163 ~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~---~~~~--~~~~~~~~~~-------------~~r 224 (257)
T d1xg5a_ 163 HFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFK---LHDK--DPEKAAATYE-------------QMK 224 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHH---HTTT--CHHHHHHHHC----------------
T ss_pred HHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhh---cChh--hHHHHHhcCC-------------CCC
Confidence 35999999998887543 357999999998876532211 0010 0111111111 122
Q ss_pred eeehHHHHHHHHHHHH
Q 008324 302 VIPVDMVVNAMIVAMV 317 (570)
Q Consensus 302 ~VpVDdva~aii~a~~ 317 (570)
+.-.+|+|++++.++.
T Consensus 225 ~~~pedvA~~v~fL~s 240 (257)
T d1xg5a_ 225 CLKPEDVAEAVIYVLS 240 (257)
T ss_dssp CBCHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHhC
Confidence 3568899999998876
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.46 E-value=1.4e-12 Score=128.14 Aligned_cols=234 Identities=13% Similarity=0.110 Sum_probs=147.5
Q ss_pred HHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 008324 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
-+.-++||+++||||||-||++++++|++.| .+|++..|+.... .+.+.+ .+++. ..
T Consensus 12 ~~~sL~gK~~lITGas~GIG~aia~~la~~G---a~Vvi~~~~~~~~--~~~~~~---------~~~~~---------g~ 68 (272)
T d1g0oa_ 12 QSASLEGKVALVTGAGRGIGREMAMELGRRG---CKVIVNYANSTES--AEEVVA---------AIKKN---------GS 68 (272)
T ss_dssp GGGCCTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCHHH--HHHHHH---------HHHHT---------TC
T ss_pred CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEeCCchHH--HHHHHH---------HHHhh---------CC
Confidence 3445899999999999999999999999999 6778777754321 122221 11111 35
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-
Q 008324 86 KITFVPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK- 150 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~- 150 (570)
++.++.+|++++ +..+.+ ...+|+++|+|+.... .+.++..+++|+.|+..+++++..
T Consensus 69 ~~~~~~~D~~~~-------~~v~~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~ 141 (272)
T d1g0oa_ 69 DAACVKANVGVV-------EDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKH 141 (272)
T ss_dssp CEEEEECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ceeeEeCCCCCH-------HHHHHHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccc
Confidence 788999999953 323333 3468999999997643 245777899999999999998875
Q ss_pred ccCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 151 CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 151 ~~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
|..-.+.+.++|........ .....
T Consensus 142 m~~~g~~i~i~s~~~~~~~~-------------------------------------------------------~~~~~ 166 (272)
T d1g0oa_ 142 LEIGGRLILMGSITGQAKAV-------------------------------------------------------PKHAV 166 (272)
T ss_dssp SCTTCEEEEECCGGGTCSSC-------------------------------------------------------SSCHH
T ss_pred cccccccccccccccccccc-------------------------------------------------------cchhh
Confidence 44445677777654221100 22456
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCC-ccccC--ccchHHHHH-HHhcCCceeeecCCCeeee
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFP-GWVED--LKTINTLFV-ASAQGNLRCLVGETKVIMD 301 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~-gw~~~--~~~~~~~i~-~~~~G~~~~~~~~~~~~~d 301 (570)
|+.||+..+.+++.. ..++++..|.||.|-++..+... .+... ......... ...... + ..-
T Consensus 167 Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----P-----lgR 237 (272)
T d1g0oa_ 167 YSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWS----P-----LRR 237 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSC----T-----TCS
T ss_pred HHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccC----C-----CCC
Confidence 999999999888754 45899999999998654221000 00000 000011100 011111 0 012
Q ss_pred eeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 302 ~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+.-.+|||++++.++...+. --.|++..+.+|
T Consensus 238 ~~~peevA~~v~fL~s~~s~-~itG~~i~vDGG 269 (272)
T d1g0oa_ 238 VGLPIDIARVVCFLASNDGG-WVTGKVIGIDGG 269 (272)
T ss_dssp CBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCchhc-CccCceEeECCC
Confidence 45679999999998864332 223778888776
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=1.4e-13 Score=133.12 Aligned_cols=166 Identities=14% Similarity=0.111 Sum_probs=119.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++-||++++++|++.| .+|++..|++... +.+.+++ ++ ...++..
T Consensus 5 l~Gkv~lITGas~GIG~~ia~~la~~G---~~V~l~~r~~~~l---~~~~~~~---------~~---------~~~~~~~ 60 (244)
T d1yb1a_ 5 VTGEIVLITGAGHGIGRLTAYEFAKLK---SKLVLWDINKHGL---EETAAKC---------KG---------LGAKVHT 60 (244)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HH---------TTCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHH---------Hh---------cCCcEEE
Confidence 689999999999999999999999999 7889999975332 2222121 11 1367889
Q ss_pred EeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHHH-c--c
Q 008324 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f~-------~~~~~~~~~Nv~gt~~ll~la~~-~--~ 152 (570)
+.+|++++ +..+.+ ...+|++||+||..... +.++..+++|+.|+.++.+.+.. | .
T Consensus 61 ~~~Dvs~~-------~~v~~~~~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~ 133 (244)
T d1yb1a_ 61 FVVDCSNR-------EDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN 133 (244)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EEeeCCCH-------HHHHHHHHHHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhc
Confidence 99999954 333332 34699999999986431 34677899999999999886654 3 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|.+||........ ....|+
T Consensus 134 ~~G~Iv~isS~~~~~~~~--------------------------------------------------------~~~~Y~ 157 (244)
T d1yb1a_ 134 NHGHIVTVASAAGHVSVP--------------------------------------------------------FLLAYC 157 (244)
T ss_dssp TCEEEEEECCCC-CCCHH--------------------------------------------------------HHHHHH
T ss_pred CCceEEEeecchhcCCCC--------------------------------------------------------CcHHHH
Confidence 446899999986442211 124699
Q ss_pred HHHHHHHHHHHHh--------ccCCcEEEEecCceecC
Q 008324 233 FTKTMGEMLMQQS--------KENLSLVIIRPTVVSGT 262 (570)
Q Consensus 233 ~sK~~aE~lv~~~--------~~~lp~~IvRPsiV~g~ 262 (570)
.||+..+.+.+.. ..++.+..+.||.|-.+
T Consensus 158 asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~ 195 (244)
T d1yb1a_ 158 SSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTG 195 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCCh
Confidence 9999887777654 14689999999988654
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.46 E-value=8.6e-13 Score=128.81 Aligned_cols=227 Identities=15% Similarity=0.125 Sum_probs=143.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+||||||||-||+++++.|++.| .+|++..|..... .+++.+++ ++ ...++..
T Consensus 4 L~GK~alITGas~GIG~aia~~la~~G---~~Vvi~~~~~~~~--~~~~~~~~---------~~---------~g~~~~~ 60 (259)
T d1ja9a_ 4 LAGKVALTTGAGRGIGRGIAIELGRRG---ASVVVNYGSSSKA--AEEVVAEL---------KK---------LGAQGVA 60 (259)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCHHH--HHHHHHHH---------HH---------TTCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEcCCChHH--HHHHHHHH---------HH---------cCCCceE
Confidence 689999999999999999999999999 6777766654321 22222111 11 1357889
Q ss_pred EeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-ccCc
Q 008324 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-CVKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~~~l 154 (570)
+.+|++++ +..+.+ ...+|++||+||.... .+.++..+++|+.+...+++.+.. |++-
T Consensus 61 ~~~D~~~~-------~~v~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~ 133 (259)
T d1ja9a_ 61 IQADISKP-------SEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG 133 (259)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE
T ss_pred ecCCCCCH-------HHHHHHHHHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC
Confidence 99999953 333332 2369999999997632 245778899999999999988875 3333
Q ss_pred eEEEEEeccee-ecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHH
Q 008324 155 KVFVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (570)
Q Consensus 155 ~~~V~vSTa~v-~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
.+.+.++|... .... +....|..
T Consensus 134 g~~iii~s~~~~~~~~--------------------------------------------------------~~~~~Y~a 157 (259)
T d1ja9a_ 134 GRIILTSSIAAVMTGI--------------------------------------------------------PNHALYAG 157 (259)
T ss_dssp EEEEEECCGGGTCCSC--------------------------------------------------------CSCHHHHH
T ss_pred CcccccccccccccCC--------------------------------------------------------CCchhHHH
Confidence 45656555421 2110 12357999
Q ss_pred HHHHHHHHHHHh-----ccCCcEEEEecCceecCCC------CCCCccccCccchHHHHHHHhcCCceeeecCCCeeeee
Q 008324 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYK------EPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDV 302 (570)
Q Consensus 234 sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~------ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
||+..+.+++.. ..++++..|.||.|-.+.. .+...+. . .....+...+....+ ..-+
T Consensus 158 sK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~p---------l~R~ 226 (259)
T d1ja9a_ 158 SKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYK-G-MPQEKIDEGLANMNP---------LKRI 226 (259)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCT-T-CCHHHHHHHHHHTST---------TSSC
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcc-c-CCHHHHHHHHHhCCC---------CCCC
Confidence 999888887754 4579999999999865321 0000000 0 111111122211111 1124
Q ss_pred eehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.-.+||+++++.++.+.+.- -.|++..+.+|
T Consensus 227 g~p~eVa~~v~fL~S~~a~~-itG~~i~vDGG 257 (259)
T d1ja9a_ 227 GYPADIGRAVSALCQEESEW-INGQVIKLTGG 257 (259)
T ss_dssp BCHHHHHHHHHHHHSGGGTT-CCSCEEEESTT
T ss_pred cCHHHHHHHHHHHhCchhcC-CcCceEEeCCC
Confidence 56789999999988644322 23778887765
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.45 E-value=4.7e-13 Score=129.61 Aligned_cols=224 Identities=11% Similarity=0.085 Sum_probs=145.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|-||++++++|++.| .+|++..|++. +++ ++ .+ ...+..
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~G---~~Vi~~~r~~~------~l~-~~---------~~----------~~~~~~ 54 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFAREG---AKVIATDINES------KLQ-EL---------EK----------YPGIQT 54 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHH------HHG-GG---------GG----------STTEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEeCCHH------HHH-HH---------Hh----------ccCCce
Confidence 789999999999999999999999999 67888888642 221 11 00 245677
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--cCceEEEE
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--VKLKVFVH 159 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~l~~~V~ 159 (570)
...|+...+ ..+.....+..+|++||+||.... .+.++..+++|+.|+..+.+.+.. + .+-.++|.
T Consensus 55 ~~~d~~~~~----~~~~~~~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~ 130 (245)
T d2ag5a1 55 RVLDVTKKK----QIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIIN 130 (245)
T ss_dssp EECCTTCHH----HHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred eeeeccccc----cccccccccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeee
Confidence 788887321 112222334579999999998653 245788899999999999887764 2 24458999
Q ss_pred EecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHH
Q 008324 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (570)
Q Consensus 160 vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE 239 (570)
+||....- .+ + .....|+.+|+..+
T Consensus 131 isS~~~~~--~~------~-----------------------------------------------~~~~~Y~~sKaal~ 155 (245)
T d2ag5a1 131 MSSVASSV--KG------V-----------------------------------------------VNRCVYSTTKAAVI 155 (245)
T ss_dssp ECCSBTTT--BC------C-----------------------------------------------TTBHHHHHHHHHHH
T ss_pred eechhhcc--CC------c-----------------------------------------------cchhHHHHHHHHHH
Confidence 98754210 00 0 22457999999999
Q ss_pred HHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHH
Q 008324 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (570)
Q Consensus 240 ~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~ 314 (570)
.+++.. ..++++..|.||.|-++.... +.............+....+ ..-+.-.+|+|+++..
T Consensus 156 ~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~---~~~~~~~~~~~~~~~~~~~p---------l~R~~~pedva~~v~f 223 (245)
T d2ag5a1 156 GLTKSVAADFIQQGIRCNCVCPGTVDTPSLQE---RIQARGNPEEARNDFLKRQK---------TGRFATAEEIAMLCVY 223 (245)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEESCEECHHHHH---HHHHSSSHHHHHHHHHHTCT---------TSSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhCcEEEEEeeceeechhhHh---hhhhhhhhHHHHHHHHhcCC---------CCCCcCHHHHHHHHHH
Confidence 988765 458999999999987643210 00000111111111111110 1123466899999999
Q ss_pred HHHHhhCCCCCCceEEecCC
Q 008324 315 AMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 315 a~~~~~~~~~~~~iyni~s~ 334 (570)
++.+.+.- -.|++..+.+|
T Consensus 224 L~s~~s~~-iTG~~i~VDGG 242 (245)
T d2ag5a1 224 LASDESAY-VTGNPVIIDGG 242 (245)
T ss_dssp HHSGGGTT-CCSCEEEECTT
T ss_pred HhChhhCC-CcCceEEeCCC
Confidence 88644322 23788888776
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.45 E-value=3.8e-13 Score=130.21 Aligned_cols=218 Identities=13% Similarity=0.147 Sum_probs=141.7
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
+.|+||||++-||++++++|++.| .+|++..+.... ..+.+.++ +++ . ..++.++.+
T Consensus 2 pV~lITGas~GIG~a~a~~la~~G---a~V~i~~~~~~~--~~~~~~~~---------~~~-~--------g~~~~~~~~ 58 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAG---CKVLVNYARSAK--AAEEVSKQ---------IEA-Y--------GGQAITFGG 58 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHH---------HHH-H--------TCEEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCCHH--HHHHHHHH---------HHH-c--------CCcEEEEeC
Confidence 469999999999999999999999 677766543321 12222211 111 1 367889999
Q ss_pred cCCCCCCCCCchhhHHHHh-------CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--cCce
Q 008324 93 DISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--VKLK 155 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~-------~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~l~ 155 (570)
|++++ +..+.++ ..+|++||+|+.... .+.++..+++|+.|+..+.+.+.. | .+-.
T Consensus 59 Dv~~~-------~~v~~~~~~~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G 131 (244)
T d1edoa_ 59 DVSKE-------ADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKG 131 (244)
T ss_dssp CTTSH-------HHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred CCCCH-------HHHHHHHHHHHHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCc
Confidence 99953 3333332 469999999997642 256788899999999999887765 3 2456
Q ss_pred EEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHH
Q 008324 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (570)
Q Consensus 156 ~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
++|++||....... +....|+.||
T Consensus 132 ~IVnisS~~~~~~~--------------------------------------------------------~~~~~Y~asK 155 (244)
T d1edoa_ 132 RIINIASVVGLIGN--------------------------------------------------------IGQANYAAAK 155 (244)
T ss_dssp EEEEECCTHHHHCC--------------------------------------------------------TTCHHHHHHH
T ss_pred EEEEEcChhhcCCC--------------------------------------------------------CCCHHHHHHH
Confidence 89999997543221 1235799999
Q ss_pred HHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHH
Q 008324 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (570)
Q Consensus 236 ~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ 310 (570)
+..+.+.+.. ..++++..+.||.|-.+..+..+ ........... + ..-+.-.+|+|+
T Consensus 156 aal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~---------~~~~~~~~~~~----p-----l~R~~~p~dvA~ 217 (244)
T d1edoa_ 156 AGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLG---------EDMEKKILGTI----P-----LGRTGQPENVAG 217 (244)
T ss_dssp HHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC---------HHHHHHHHTSC----T-----TCSCBCHHHHHH
T ss_pred HHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhh---------HHHHHHHHhcC----C-----CCCCcCHHHHHH
Confidence 9999888754 45899999999988654322111 11111111111 1 112345799999
Q ss_pred HHHHHHHHhhCCCCCCceEEecCC
Q 008324 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 311 aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++..++......--.|++..+.+|
T Consensus 218 ~v~fLa~S~~a~~itG~~i~vdGG 241 (244)
T d1edoa_ 218 LVEFLALSPAASYITGQAFTIDGG 241 (244)
T ss_dssp HHHHHHHCSGGGGCCSCEEEESTT
T ss_pred HHHHHHCCchhcCCcCCeEEeCCC
Confidence 998875322211123778888776
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.43 E-value=3e-13 Score=135.07 Aligned_cols=212 Identities=16% Similarity=0.198 Sum_probs=137.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCc------ccHHHHHHHHHhhhhhHHHHHhhhcccccccc
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI------DSAALRFQNEVLAKDVFNVLKEKWGTRLNSFI 83 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~------~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~ 83 (570)
++||+++||||++.||++++++|++.| .+|++..|+... ....+++.+++ .
T Consensus 5 l~gKvalITGas~GIG~aiA~~la~~G---a~Vvi~d~~~~~~~~~~~~~~~~~~~~~~-------------~------- 61 (302)
T d1gz6a_ 5 FDGRVVLVTGAGGGLGRAYALAFAERG---ALVVVNDLGGDFKGVGKGSSAADKVVEEI-------------R------- 61 (302)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEECCCBCTTSCBCCSHHHHHHHHHH-------------H-------
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEeCCchhhhhhhhHHHHHHHHHHH-------------h-------
Confidence 789999999999999999999999999 677887775431 22222222111 1
Q ss_pred CCceEEEeccCCCCCCCCCchhhHHH---HhCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c-
Q 008324 84 SEKITFVPGDISSEDLGLKDSNLKEE---LWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C- 151 (570)
Q Consensus 84 ~~kv~~v~gDl~~~~lgls~~~~~~~---l~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~- 151 (570)
.+...+..|+++.+- .+...+. .+.++|++||+||.... .+.++..+++|+.|+..+.+.+.. |
T Consensus 62 -~~~~~~~~d~~~~~~---~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~ 137 (302)
T d1gz6a_ 62 -RRGGKAVANYDSVEA---GEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMK 137 (302)
T ss_dssp -HTTCEEEEECCCGGG---HHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -hcccccccccchHHH---HHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHH
Confidence 122345567775321 1122222 23469999999997642 245788899999999999887754 3
Q ss_pred -cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+-.++|.+||....... .....
T Consensus 138 ~~~~G~IV~isS~~~~~~~--------------------------------------------------------~~~~~ 161 (302)
T d1gz6a_ 138 KQNYGRIIMTASASGIYGN--------------------------------------------------------FGQAN 161 (302)
T ss_dssp HHTCEEEEEECCHHHHHCC--------------------------------------------------------TTCHH
T ss_pred hCCCcEEEEeCChhhcCCC--------------------------------------------------------CCcHH
Confidence 244689999987543211 11357
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..+.+.+.. ..++.+..+-|+.+........+ .. ....+..
T Consensus 162 Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~---------~~-------------------~~~~~~P 213 (302)
T d1gz6a_ 162 YSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMP---------ED-------------------LVEALKP 213 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSC---------HH-------------------HHHHSCG
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCc---------Hh-------------------hHhcCCH
Confidence 999999998887754 56899999999876443221110 01 1112235
Q ss_pred HHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|+|++++.++.+.. .-.|+++.+.+|
T Consensus 214 edvA~~v~fL~S~~a--~itG~~i~vdGG 240 (302)
T d1gz6a_ 214 EYVAPLVLWLCHESC--EENGGLFEVGAG 240 (302)
T ss_dssp GGTHHHHHHHTSTTC--CCCSCEEEEETT
T ss_pred HHHHHHHHHHcCCCc--CCCCcEEEeCCC
Confidence 889999988774322 224677777665
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.42 E-value=1.3e-12 Score=125.91 Aligned_cols=167 Identities=17% Similarity=0.212 Sum_probs=116.4
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCc----cEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNV----KKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V----~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.||||||++-||++++++|++.|..+ ..|++..|++.. .+.+.+++ ++ ...++.+
T Consensus 3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~---l~~~~~~~---------~~---------~g~~~~~ 61 (240)
T d2bd0a1 3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAAD---LEKISLEC---------RA---------EGALTDT 61 (240)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHH---HHHHHHHH---------HT---------TTCEEEE
T ss_pred EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHH---HHHHHHHH---------Hh---------cCCcEEE
Confidence 47999999999999999999998531 136666675432 22222121 11 1357888
Q ss_pred EeccCCCCCCCCCchhhHHHH-------hCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--c
Q 008324 90 VPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~ 152 (570)
+.+|++++ +..+.+ +..+|++||+|+.... .+.++..+++|+.|+..+.+.+.. | .
T Consensus 62 ~~~Dvt~~-------~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~ 134 (240)
T d2bd0a1 62 ITADISDM-------ADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ 134 (240)
T ss_dssp EECCTTSH-------HHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCH-------HHHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhc
Confidence 99999953 323332 2369999999997643 256788899999999999887764 2 2
Q ss_pred CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHH
Q 008324 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (570)
Q Consensus 153 ~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|.+||....... +....|+
T Consensus 135 ~~G~Ii~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 158 (240)
T d2bd0a1 135 HSGHIFFITSVAATKAF--------------------------------------------------------RHSSIYC 158 (240)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHHH
T ss_pred CCCceEEEechhhcCCC--------------------------------------------------------CCChHHH
Confidence 44689999987543211 1235799
Q ss_pred HHHHHHHHHHHHh-----ccCCcEEEEecCceecCCC
Q 008324 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYK 264 (570)
Q Consensus 233 ~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ 264 (570)
.||+..+.+.+.. ..++.+..+.||.|-.+..
T Consensus 159 asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~ 195 (240)
T d2bd0a1 159 MSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMW 195 (240)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTT
T ss_pred HHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchh
Confidence 9999888877654 4579999999999876543
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.41 E-value=1.4e-11 Score=119.22 Aligned_cols=174 Identities=16% Similarity=0.158 Sum_probs=116.5
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.|+|||||||+-||++++++|++....-.+|++..|++......+.+. +. ..++.++.
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~-------------~~---------~~~~~~~~ 59 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLA-------------KN---------HSNIHILE 59 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHH-------------HH---------CTTEEEEE
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHH-------------hc---------CCcEEEEE
Confidence 589999999999999999999863222278999999876653322211 11 36899999
Q ss_pred ccCCCCCCCCCchhhHHHH-----hCCccEEEEcCccCCc----c----ccHHHHHHHhHHHHHHHHHHHHHc-------
Q 008324 92 GDISSEDLGLKDSNLKEEL-----WNELDIMVNSAAITKF----D----ERYDVAFGINTLGVIHLVNFAKKC------- 151 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l-----~~~vdiViH~AA~v~f----~----~~~~~~~~~Nv~gt~~ll~la~~~------- 151 (570)
+|+++++.. .+..+.+ ...+|++||+||.... . +.++..+++|+.|+..+.+.+...
T Consensus 60 ~Dvs~~~~v---~~~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~ 136 (248)
T d1snya_ 60 IDLRNFDAY---DKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKA 136 (248)
T ss_dssp CCTTCGGGH---HHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeccHHHH---HHHHhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhc
Confidence 999975411 1111111 1359999999997432 1 236677999999999888766431
Q ss_pred -------cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhcccccccc
Q 008324 152 -------VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKL 224 (570)
Q Consensus 152 -------~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 224 (570)
.+-.++|.+||....- . ..+.
T Consensus 137 ~~~~~~~~~~g~ii~i~S~~g~~--~----~~~~---------------------------------------------- 164 (248)
T d1snya_ 137 NESQPMGVGRAAIINMSSILGSI--Q----GNTD---------------------------------------------- 164 (248)
T ss_dssp TTTSCSSTTTCEEEEECCGGGCS--T----TCCS----------------------------------------------
T ss_pred ccccccccccccccccccccccc--C----CCCC----------------------------------------------
Confidence 1235788888864211 0 0000
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCC
Q 008324 225 HGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (570)
Q Consensus 225 ~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~ 263 (570)
+....|..||+....+.+.. ..++.+..+.||.|-.+.
T Consensus 165 -~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m 207 (248)
T d1snya_ 165 -GGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM 207 (248)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTT
T ss_pred -CChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCc
Confidence 11247999999888887654 457999999999886653
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.41 E-value=3.1e-12 Score=126.99 Aligned_cols=224 Identities=13% Similarity=0.091 Sum_probs=140.6
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.|+||+++||||||.||++++++|++.| .+|++..|+..... ... +.+.++. ..++.
T Consensus 22 ~l~gK~alITGas~GIG~aiA~~la~~G---a~Vii~~r~~~~l~---~~~---------~~l~~~~--------g~~~~ 78 (294)
T d1w6ua_ 22 SFQGKVAFITGGGTGLGKGMTTLLSSLG---AQCVIASRKMDVLK---ATA---------EQISSQT--------GNKVH 78 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHH---HHH---------HHHHHHH--------SSCEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEECCHHHHH---HHH---------HHHHHhc--------CCceE
Confidence 5899999999999999999999999999 78899998753321 111 1122222 36788
Q ss_pred EEeccCCCCCCCCCchhhHHH-------HhCCccEEEEcCccCCcc-------ccHHHHHHHhHHHHHHHHHHHHH----
Q 008324 89 FVPGDISSEDLGLKDSNLKEE-------LWNELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAKK---- 150 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~-------l~~~vdiViH~AA~v~f~-------~~~~~~~~~Nv~gt~~ll~la~~---- 150 (570)
.+.+|++++ +..+. ....+|+++|+|+..... +.+...+.+|..+...+...+..
T Consensus 79 ~~~~D~~~~-------~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 151 (294)
T d1w6ua_ 79 AIQCDVRDP-------DMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIK 151 (294)
T ss_dssp EEECCTTCH-------HHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecccCh-------HHHHHHhhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhccccc
Confidence 999999953 32222 234699999999976432 33556678888887777554322
Q ss_pred ccCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 151 CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 151 ~~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
..+-..++.+|+.+..... +....
T Consensus 152 ~~~~~~i~~~ss~~~~~~~--------------------------------------------------------~~~~~ 175 (294)
T d1w6ua_ 152 AQKGAAFLSITTIYAETGS--------------------------------------------------------GFVVP 175 (294)
T ss_dssp TTCCEEEEEECCTHHHHCC--------------------------------------------------------TTCHH
T ss_pred ccccccccccccchhhhcc--------------------------------------------------------cccch
Confidence 2234456666655432211 12356
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..+.+++.. ..++++..|.||.|-.+...... +. ............ +. .-+.-.
T Consensus 176 YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~---~~---~~~~~~~~~~~~----pl-----~R~~~p 240 (294)
T d1w6ua_ 176 SASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRL---DP---TGTFEKEMIGRI----PC-----GRLGTV 240 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------C---CT---TSHHHHHHHTTC----TT-----SSCBCH
T ss_pred HHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhcc---CC---cHHHHHHHhhcC----CC-----CCCCCH
Confidence 999999999998754 45799999999999775432111 10 001111122111 10 113456
Q ss_pred HHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|+|+++..++.+.+.- -.|++..+.+|
T Consensus 241 ediA~~v~fL~sd~s~~-itG~~i~vDGG 268 (294)
T d1w6ua_ 241 EELANLAAFLCSDYASW-INGAVIKFDGG 268 (294)
T ss_dssp HHHHHHHHHHTSGGGTT-CCSCEEEESTT
T ss_pred HHHHHHHHHHhCchhcC-CCCcEEEECCC
Confidence 99999999888643322 23788988887
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.39 E-value=2e-12 Score=124.34 Aligned_cols=202 Identities=11% Similarity=0.077 Sum_probs=131.9
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+||+|+||||+|.||++++++|++.| .+|+++.|.+.... .....+
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G---~~V~~~~~~~~~~~-------------------------------~~~~~~ 46 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARN---WWVASIDVVENEEA-------------------------------SASVIV 46 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTT---CEEEEEESSCCTTS-------------------------------SEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCccccc-------------------------------ccccee
Confidence 58999999999999999999999999 67788777654321 222233
Q ss_pred eccCCCCCCCCCchhhH----HHHhC--CccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHH-ccCce
Q 008324 91 PGDISSEDLGLKDSNLK----EELWN--ELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKK-CVKLK 155 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~----~~l~~--~vdiViH~AA~v~----f----~~~~~~~~~~Nv~gt~~ll~la~~-~~~l~ 155 (570)
..|..+.+ +.+.. ..... ++|++||+||... + .+.++..+++|+.++.++.+++.. +++-.
T Consensus 47 ~~~~~~~~----~~~~~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G 122 (236)
T d1dhra_ 47 KMTDSFTE----QADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGG 122 (236)
T ss_dssp CCCSCHHH----HHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred ecccCcHH----HHHHHHHHHHHHhCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccccc
Confidence 44443211 11111 11222 4899999998532 1 134667789999999999888765 44446
Q ss_pred EEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHH
Q 008324 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (570)
Q Consensus 156 ~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
++|.+||....... +....|+.||
T Consensus 123 ~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK 146 (236)
T d1dhra_ 123 LLTLAGAKAALDGT--------------------------------------------------------PGMIGYGMAK 146 (236)
T ss_dssp EEEEECCGGGGSCC--------------------------------------------------------TTBHHHHHHH
T ss_pred ceeEEccHHHcCCc--------------------------------------------------------cCCcccHHHH
Confidence 89999987543211 1135799999
Q ss_pred HHHHHHHHHh----c---cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHH
Q 008324 236 TMGEMLMQQS----K---ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (570)
Q Consensus 236 ~~aE~lv~~~----~---~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
+..+.+.+.. . .++.+..+.|+.|..+... .... ......++|.+++
T Consensus 147 aal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~-----------------~~~~---------~~~~~~~~~pe~v 200 (236)
T d1dhra_ 147 GAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNR-----------------KSMP---------EADFSSWTPLEFL 200 (236)
T ss_dssp HHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHH-----------------HHST---------TSCGGGSEEHHHH
T ss_pred HHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcch-----------------hhCc---------cchhhcCCCHHHH
Confidence 9999999875 2 4789999999988764321 1100 0112246889999
Q ss_pred HHHHHHHHHHhhCCCCCCceEEecC
Q 008324 309 VNAMIVAMVAHAKQPSDANIYHVGS 333 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyni~s 333 (570)
++.+..++.... ..-.|.++.+.+
T Consensus 201 a~~~~~l~s~~~-~~i~G~~i~v~~ 224 (236)
T d1dhra_ 201 VETFHDWITGNK-RPNSGSLIQVVT 224 (236)
T ss_dssp HHHHHHHHTTTT-CCCTTCEEEEEE
T ss_pred HHHHHHHhCCCc-cCCCCCeEEEEE
Confidence 999988775322 223366666543
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.38 E-value=6.9e-12 Score=122.21 Aligned_cols=172 Identities=13% Similarity=0.163 Sum_probs=119.9
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
-++||.++|||||+.||++++++|.+...+-.+|++..|+... .+.+.++ +..+.+ ..++.
T Consensus 3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~---l~~~~~~---------l~~~~~-------~~~~~ 63 (259)
T d1oaaa_ 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESM---LRQLKEE---------LGAQQP-------DLKVV 63 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHH---HHHHHHH---------HHHHCT-------TSEEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHH---HHHHHHH---------HHhhcC-------CceEE
Confidence 4689999999999999999999998632111688999886532 2222211 222222 25788
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-----------CCccEEEEcCccCC------cc----ccHHHHHHHhHHHHHHHHHH
Q 008324 89 FVPGDISSEDLGLKDSNLKEELW-----------NELDIMVNSAAITK------FD----ERYDVAFGINTLGVIHLVNF 147 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-----------~~vdiViH~AA~v~------f~----~~~~~~~~~Nv~gt~~ll~l 147 (570)
++.+|+++ ++..+.++ ..+|+++|+||... +. +.++..+++|+.|+..+.+.
T Consensus 64 ~~~~Dvs~-------~~~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ 136 (259)
T d1oaaa_ 64 LAAADLGT-------EAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSG 136 (259)
T ss_dssp EEECCTTS-------HHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred EEEccCCC-------HHHHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHH
Confidence 99999995 33333332 13689999998642 11 34777899999999999998
Q ss_pred HHHc-cC----ceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhcccccc
Q 008324 148 AKKC-VK----LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERA 222 (570)
Q Consensus 148 a~~~-~~----l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 222 (570)
+... .. -.++|.+||.......
T Consensus 137 ~~~~m~~~~~~~g~Iv~isS~~~~~~~----------------------------------------------------- 163 (259)
T d1oaaa_ 137 TLNAFQDSPGLSKTVVNISSLCALQPY----------------------------------------------------- 163 (259)
T ss_dssp HHHTSCCCTTCEEEEEEECCGGGTSCC-----------------------------------------------------
T ss_pred HHHHHHhcCCCcccccccccccccCCC-----------------------------------------------------
Confidence 8653 21 2478999987543211
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh---ccCCcEEEEecCceecC
Q 008324 223 KLHGWPNTYVFTKTMGEMLMQQS---KENLSLVIIRPTVVSGT 262 (570)
Q Consensus 223 ~~~~~~n~Y~~sK~~aE~lv~~~---~~~lp~~IvRPsiV~g~ 262 (570)
+....|+.||+..+.+.+.. ..++.+..+.||.|-++
T Consensus 164 ---~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~ 203 (259)
T d1oaaa_ 164 ---KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND 203 (259)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH
T ss_pred ---ccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCH
Confidence 12357999999999888765 56899999999988764
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.38 E-value=2.1e-12 Score=124.06 Aligned_cols=206 Identities=11% Similarity=0.061 Sum_probs=131.1
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+++||||||||-||++++++|++.| .+|+++.|.+.... .....+.
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G---~~V~~~~~~~~~~~-------------------------------~~~~~~~ 47 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNG---YTVLNIDLSANDQA-------------------------------DSNILVD 47 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTT---EEEEEEESSCCTTS-------------------------------SEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCchhcc-------------------------------cccceec
Confidence 4679999999999999999999999 78899999765321 2333455
Q ss_pred ccCCCCCCCCCchhhHHHHh--CCccEEEEcCccCCc--------cccHHHHHHHhHHHHHHHHHHHHH-ccCceEEEEE
Q 008324 92 GDISSEDLGLKDSNLKEELW--NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKK-CVKLKVFVHV 160 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~--~~vdiViH~AA~v~f--------~~~~~~~~~~Nv~gt~~ll~la~~-~~~l~~~V~v 160 (570)
+|+...+.-....+...... .++|++||+||.... .+.++..+++|+.|+..+.+++.. +++-.++|++
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~i 127 (235)
T d1ooea_ 48 GNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLT 127 (235)
T ss_dssp TTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccCchhHHHHHHHHHHHHhcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEe
Confidence 66553210000011111111 358999999996322 134566789999999999888765 3333679999
Q ss_pred ecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHHH
Q 008324 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (570)
Q Consensus 161 STa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~ 240 (570)
||....... +....|+.||+..+.
T Consensus 128 sS~~~~~~~--------------------------------------------------------~~~~~Y~asKaal~~ 151 (235)
T d1ooea_ 128 GAAAAMGPT--------------------------------------------------------PSMIGYGMAKAAVHH 151 (235)
T ss_dssp CCGGGGSCC--------------------------------------------------------TTBHHHHHHHHHHHH
T ss_pred ccHHhcCCc--------------------------------------------------------ccccchHHHHHHHHH
Confidence 986533211 113579999999999
Q ss_pred HHHHh----c---cCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHH
Q 008324 241 LMQQS----K---ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (570)
Q Consensus 241 lv~~~----~---~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii 313 (570)
+.+.. . .++.+..+.|+.+-.+. ......+ .....+++.+++++.++
T Consensus 152 l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~-----------------~~~~~~~---------~~~~~~~~~~~va~~~~ 205 (235)
T d1ooea_ 152 LTSSLAAKDSGLPDNSAVLTIMPVTLDTPM-----------------NRKWMPN---------ADHSSWTPLSFISEHLL 205 (235)
T ss_dssp HHHHHHSTTSSCCTTCEEEEEEESCBCCHH-----------------HHHHSTT---------CCGGGCBCHHHHHHHHH
T ss_pred HHHHHHHHhccCCCceEEEEEecCcCcCcc-----------------hhhhCcC---------CccccCCCHHHHHHHHH
Confidence 98875 1 35677888888765421 1111111 11234678999999987
Q ss_pred HHHHHhhCCCCCCceEEecC
Q 008324 314 VAMVAHAKQPSDANIYHVGS 333 (570)
Q Consensus 314 ~a~~~~~~~~~~~~iyni~s 333 (570)
..+.........+....+.+
T Consensus 206 ~~l~~~~~~~~tG~~i~v~~ 225 (235)
T d1ooea_ 206 KWTTETSSRPSSGALLKITT 225 (235)
T ss_dssp HHHHCGGGCCCTTCEEEEEE
T ss_pred HHhcCccccCCCceEEEEEe
Confidence 65543333333366666644
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.37 E-value=4.1e-12 Score=125.70 Aligned_cols=170 Identities=11% Similarity=0.116 Sum_probs=118.8
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|.|||||||+-||++++++|++.|..|..|+...|+.+.....+...+++ . ....++..+.+
T Consensus 3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~------------~------~~~~~~~~~~~ 64 (285)
T d1jtva_ 3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARAL------------A------CPPGSLETLQL 64 (285)
T ss_dssp EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHT------------T------CCTTSEEEEEC
T ss_pred CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHH------------h------ccCCceEEEec
Confidence 56799999999999999999999977666666666544332222111111 0 01368999999
Q ss_pred cCCCCCCCCCchhhHHHHh-----CCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--cCceEE
Q 008324 93 DISSEDLGLKDSNLKEELW-----NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--VKLKVF 157 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~-----~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~l~~~ 157 (570)
|+++ .+..+.++ ..+|+++|+|+.... .+.++..+++|+.|+.++.+++.. | .+-.++
T Consensus 65 Dv~~-------~~~~~~~~~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~I 137 (285)
T d1jtva_ 65 DVRD-------SKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRV 137 (285)
T ss_dssp CTTC-------HHHHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred cccc-------hHhhhhhhhhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCce
Confidence 9995 33333443 248999999987643 245777899999999999887754 3 245689
Q ss_pred EEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHH
Q 008324 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (570)
Q Consensus 158 V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~ 237 (570)
|.+||....... +....|+.||+.
T Consensus 138 v~isS~~g~~~~--------------------------------------------------------~~~~~Y~asKaa 161 (285)
T d1jtva_ 138 LVTGSVGGLMGL--------------------------------------------------------PFNDVYCASKFA 161 (285)
T ss_dssp EEEEEGGGTSCC--------------------------------------------------------TTCHHHHHHHHH
T ss_pred EEEechhhcCCC--------------------------------------------------------CCchHHHHHHHH
Confidence 999987543211 223579999998
Q ss_pred HHHHHHHh-----ccCCcEEEEecCceecCC
Q 008324 238 GEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (570)
Q Consensus 238 aE~lv~~~-----~~~lp~~IvRPsiV~g~~ 263 (570)
.+.+.+.. ..++.+..+.||.|-.+.
T Consensus 162 l~~l~~~la~El~~~gIrVn~V~PG~v~T~~ 192 (285)
T d1jtva_ 162 LEGLCESLAVLLLPFGVHLSLIECGPVHTAF 192 (285)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred HHHHHHHHHHHhhccCcEEEEEecCCCCChH
Confidence 88887654 458999999999987643
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.36 E-value=2e-12 Score=125.38 Aligned_cols=170 Identities=11% Similarity=0.153 Sum_probs=109.9
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+.|+|+|||||+-||++++++|++.|.. .+|++..|+..... .+. +. ...++.++
T Consensus 2 ~~KtilITGassGIG~a~a~~la~~G~~-~~Vi~~~R~~~~~~---~l~-------------~~--------~~~~~~~~ 56 (250)
T d1yo6a1 2 SPGSVVVTGANRGIGLGLVQQLVKDKNI-RHIIATARDVEKAT---ELK-------------SI--------KDSRVHVL 56 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTC-CEEEEEESSGGGCH---HHH-------------TC--------CCTTEEEE
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCCC-CEEEEEeCCHHHHH---HHH-------------Hh--------hCCceEEE
Confidence 4699999999999999999999998853 36777888764321 111 11 13679999
Q ss_pred eccCCCCCCCCCchhhHHHHh-------C--CccEEEEcCccCC----c----cccHHHHHHHhHHHHHHHHHHHHHc--
Q 008324 91 PGDISSEDLGLKDSNLKEELW-------N--ELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKKC-- 151 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~-------~--~vdiViH~AA~v~----f----~~~~~~~~~~Nv~gt~~ll~la~~~-- 151 (570)
.+|++++ +..+.+. . .+|++||+||... + .+.++..+++|+.|+..+.+.+...
T Consensus 57 ~~Dvs~~-------~~v~~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~ 129 (250)
T d1yo6a1 57 PLTVTCD-------KSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLK 129 (250)
T ss_dssp ECCTTCH-------HHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHH
T ss_pred EEecCCH-------HHHHHHHHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 9999953 2222221 2 3899999999742 1 1346778999999999987776431
Q ss_pred --c----------CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccc
Q 008324 152 --V----------KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGT 219 (570)
Q Consensus 152 --~----------~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 219 (570)
+ ....++.+|+........ ....
T Consensus 130 ~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~--~~~~------------------------------------------- 164 (250)
T d1yo6a1 130 NAASKESGDQLSVSRAAVITISSGLGSITDN--TSGS------------------------------------------- 164 (250)
T ss_dssp HHHHSSCSSCCCTTTCEEEEECCGGGCSTTC--CSTT-------------------------------------------
T ss_pred HhccCCCCccccceeccccccccccccccCC--cccc-------------------------------------------
Confidence 1 112455555443221110 0000
Q ss_pred cccccCCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceec
Q 008324 220 ERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSG 261 (570)
Q Consensus 220 ~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g 261 (570)
.......|..||+....+.+.. ..++.+..+.||.|-.
T Consensus 165 ----~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T 207 (250)
T d1yo6a1 165 ----AQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQT 207 (250)
T ss_dssp ----SSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--
T ss_pred ----cchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCC
Confidence 0012346999999988887654 4579999999988754
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.35 E-value=7.4e-12 Score=121.70 Aligned_cols=225 Identities=16% Similarity=0.176 Sum_probs=140.9
Q ss_pred hcCCCEEEEECCcc--hhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 9 FLENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 9 ~~~~k~VlITGaTG--FlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
+++||+||||||+| -||++++++|++.| .+|++..|+.+... +++ ++.. . ..+
T Consensus 2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G---~~V~i~~~~~~~~~---~~~-~~~~---------~---------~~~ 56 (258)
T d1qsga_ 2 FLSGKRILVTGVASKLSIAYGIAQAMHREG---AELAFTYQNDKLKG---RVE-EFAA---------Q---------LGS 56 (258)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTT---CEEEEEESSTTTHH---HHH-HHHH---------H---------TTC
T ss_pred cCCCCEEEEECCCCchhHHHHHHHHHHHcC---CEEEEEeCCHHHHH---HHH-HHHh---------h---------cCC
Confidence 58999999999998 79999999999999 67888888754322 222 1110 1 245
Q ss_pred eEEEeccCCCCCCCCCchhhHHHH---hCCccEEEEcCccCCcc------------ccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITKFD------------ERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l---~~~vdiViH~AA~v~f~------------~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
...+..|+++... ..+..... ....|+++|+|+..... +.+.....+|+.+...+.+.+...
T Consensus 57 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (258)
T d1qsga_ 57 DIVLQCDVAEDAS---IDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSM 133 (258)
T ss_dssp CCEEECCTTCHHH---HHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred cceeecccchHHH---HHHHHHHhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5677788874210 01111111 23479999999875321 224555678888888888877664
Q ss_pred -cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 008324 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (570)
Q Consensus 152 -~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
++-..+|++||....... +....
T Consensus 134 ~~~~~~Ii~iss~~~~~~~--------------------------------------------------------~~~~~ 157 (258)
T d1qsga_ 134 LNPGSALLTLSYLGAERAI--------------------------------------------------------PNYNV 157 (258)
T ss_dssp EEEEEEEEEEECGGGTSBC--------------------------------------------------------TTTTH
T ss_pred ccCCcEEEEecchhhccCC--------------------------------------------------------CCcHH
Confidence 233457888876432110 12357
Q ss_pred HHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeeh
Q 008324 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..+.+++.. ..++++..|+|+.|..+..+. .. ........... ..+. .-+.-.
T Consensus 158 Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~----~~---~~~~~~~~~~~----~~pl-----~R~~~p 221 (258)
T d1qsga_ 158 MGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG----IK---DFRKMLAHCEA----VTPI-----RRTVTI 221 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGG----ST---THHHHHHHHHH----HSTT-----SSCCCH
T ss_pred HHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccc----cc---hhhhHHHHHHh----CCCC-----CCCcCH
Confidence 999999999988765 457999999999998764421 11 11111111111 0110 113557
Q ss_pred HHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
+|+|++++.++.+... --.+++..+.+|
T Consensus 222 eeia~~v~fL~s~~s~-~itG~~i~vDGG 249 (258)
T d1qsga_ 222 EDVGNSAAFLCSDLSA-GISGEVVHVDGG 249 (258)
T ss_dssp HHHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHhCchhc-CccCceEEECcC
Confidence 9999999988854332 223788888777
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.34 E-value=6e-12 Score=122.17 Aligned_cols=221 Identities=14% Similarity=0.104 Sum_probs=137.3
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
+++||||++.||+.++++|++.| .+|++..|+.+..+..+... .. ++.+|
T Consensus 2 TAlVTGas~GiG~aiA~~la~~G---a~V~i~~r~~~~~~~~~~~~-------------~~--------------~~~~d 51 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAG---HTVACHDESFKQKDELEAFA-------------ET--------------YPQLK 51 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTT---CEEEECCGGGGSHHHHHHHH-------------HH--------------CTTSE
T ss_pred EEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHhhh-------------Cc--------------EEEec
Confidence 78999999999999999999999 67888888765432221111 00 12466
Q ss_pred CCCCCCCCCchhhHH---HHhCCccEEEEcCccC-C---cc----ccHHHHHHHhHHHHHHHHHHHHH-c--cCceEEEE
Q 008324 94 ISSEDLGLKDSNLKE---ELWNELDIMVNSAAIT-K---FD----ERYDVAFGINTLGVIHLVNFAKK-C--VKLKVFVH 159 (570)
Q Consensus 94 l~~~~lgls~~~~~~---~l~~~vdiViH~AA~v-~---f~----~~~~~~~~~Nv~gt~~ll~la~~-~--~~l~~~V~ 159 (570)
+++++- ..+..+ +.+..+|++||+||.. . +. +.++..+++|+.|+..+.+.+.. | .+-.++|+
T Consensus 52 v~~~~~---~~~~~~~~~~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~ 128 (252)
T d1zmta1 52 PMSEQE---PAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIF 128 (252)
T ss_dssp ECCCCS---HHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred cCCHHH---HHHHHHHHHHHcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeec
Confidence 665431 112222 2234799999999864 2 21 45778889999999999887654 3 23468999
Q ss_pred EecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHHH
Q 008324 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (570)
Q Consensus 160 vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE 239 (570)
+||....... +....|+.||+..+
T Consensus 129 isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaal~ 152 (252)
T d1zmta1 129 ITSATPFGPW--------------------------------------------------------KELSTYTSARAGAC 152 (252)
T ss_dssp ECCSTTTSCC--------------------------------------------------------TTCHHHHHHHHHHH
T ss_pred cccccccccc--------------------------------------------------------ccccccccccccHH
Confidence 9987543211 11357999999999
Q ss_pred HHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHH
Q 008324 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (570)
Q Consensus 240 ~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~ 314 (570)
.+.+.. ..++++..|.|+.|-.+.......- +...........+.+.. +- .-+...+|+|++++.
T Consensus 153 ~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~-~~~~~~~e~~~~~~~~~----pl-----~R~g~pedvA~~v~f 222 (252)
T d1zmta1 153 TLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPT-EPWKTNPEHVAHVKKVT----AL-----QRLGTQKELGELVAF 222 (252)
T ss_dssp HHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBH-HHHTTCHHHHHHHHHHS----SS-----SSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhc-ccccCCHHHHHHHHhcC----CC-----CCCcCHHHHHHHHHH
Confidence 888754 5589999999999977544211100 00000011111111111 00 013467899999998
Q ss_pred HHHHhhCCCCCCceEEecCC
Q 008324 315 AMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 315 a~~~~~~~~~~~~iyni~s~ 334 (570)
++.+.+. --.|++..+.+|
T Consensus 223 L~S~~s~-~iTG~~i~vdGG 241 (252)
T d1zmta1 223 LASGSCD-YLTGQVFWLAGG 241 (252)
T ss_dssp HHTTSCG-GGTTCEEEESTT
T ss_pred HhCchhc-CCcCCeEEECCC
Confidence 8853221 123788888877
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.33 E-value=1.7e-11 Score=118.40 Aligned_cols=172 Identities=13% Similarity=0.157 Sum_probs=117.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++.||++++++|++.| .+|++..|+...... +.+++ ..+...
T Consensus 3 lkGKvalITGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~---~~~~l---------------------~~~~~~ 55 (248)
T d2o23a1 3 VKGLVAVITGGASGLGLATAERLVGQG---ASAVLLDLPNSGGEA---QAKKL---------------------GNNCVF 55 (248)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECTTSSHHH---HHHHH---------------------CTTEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCChHHHHH---HHHHh---------------------CCCccc
Confidence 689999999999999999999999999 678999988754321 11111 256677
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-------------cccHHHHHHHhHHHHHHHHHHHHHc-----
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------------DERYDVAFGINTLGVIHLVNFAKKC----- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-------------~~~~~~~~~~Nv~gt~~ll~la~~~----- 151 (570)
+..|+.+...--+..+.........|.+++.++.... .+.++..+++|+.|+.++.+++...
T Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~ 135 (248)
T d2o23a1 56 APADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNE 135 (248)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSC
T ss_pred ccccccccccccccccccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhh
Confidence 7888874321000000111222357888887765321 1456778999999999999887552
Q ss_pred ----cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCC
Q 008324 152 ----VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (570)
Q Consensus 152 ----~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 227 (570)
.+-.++|++||.+..... +.
T Consensus 136 ~~~~~~~G~Ii~isS~~~~~~~--------------------------------------------------------~~ 159 (248)
T d2o23a1 136 PDQGGQRGVIINTASVAAFEGQ--------------------------------------------------------VG 159 (248)
T ss_dssp CCTTSCCEEEEEECCTHHHHCC--------------------------------------------------------TT
T ss_pred hhccCCceEEEEecchhhccCC--------------------------------------------------------CC
Confidence 022379999998654321 12
Q ss_pred CchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCC
Q 008324 228 PNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYK 264 (570)
Q Consensus 228 ~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ 264 (570)
...|+.||+..+.+.+.. ..++++..|.||.|..+..
T Consensus 160 ~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~ 201 (248)
T d2o23a1 160 QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLL 201 (248)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--
T ss_pred chHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchh
Confidence 357999999999998765 4579999999999876544
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.29 E-value=1e-11 Score=121.76 Aligned_cols=175 Identities=13% Similarity=0.123 Sum_probs=116.5
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
+.++||+++|||||+.||++++++|++.| .+|++..|+.... +.+.+++ .+. ...++
T Consensus 10 ~~L~GK~alITGassGIG~aiA~~la~~G---~~Vil~~r~~~~l---~~~~~~~---------~~~--------~~~~~ 66 (269)
T d1xu9a_ 10 EMLQGKKVIVTGASKGIGREMAYHLAKMG---AHVVVTARSKETL---QKVVSHC---------LEL--------GAASA 66 (269)
T ss_dssp GGGTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HHH--------TCSEE
T ss_pred cccCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHH---------hhh--------hcccc
Confidence 34899999999999999999999999999 7889999965322 1211111 111 13567
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-cc-CceEEE
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-CV-KLKVFV 158 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~~-~l~~~V 158 (570)
..+..|++++..-....+........+|+++|+|+.... .+.++..+++|+.|+..+.+.+.. ++ +-.++|
T Consensus 67 ~~~~~d~~~~~~~~~~~~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii 146 (269)
T d1xu9a_ 67 HYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIV 146 (269)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcce
Confidence 788889885321100011111223468999999987532 134667789999999998887754 22 235788
Q ss_pred EEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHHHHHH
Q 008324 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (570)
Q Consensus 159 ~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~a 238 (570)
.+||....... +....|+.||+..
T Consensus 147 ~isS~~~~~~~--------------------------------------------------------p~~~~Y~asKaal 170 (269)
T d1xu9a_ 147 VVSSLAGKVAY--------------------------------------------------------PMVAAYSASKFAL 170 (269)
T ss_dssp EEEEGGGTSCC--------------------------------------------------------TTCHHHHHHHHHH
T ss_pred EeccchhcCCC--------------------------------------------------------CCchHHHHHHHHH
Confidence 88887532111 1235799999998
Q ss_pred HHHHHHh-------ccCCcEEEEecCceec
Q 008324 239 EMLMQQS-------KENLSLVIIRPTVVSG 261 (570)
Q Consensus 239 E~lv~~~-------~~~lp~~IvRPsiV~g 261 (570)
+.+.+.. ..++.+..+.||.|-.
T Consensus 171 ~~~~~~La~El~~~~~~I~V~~v~PG~v~T 200 (269)
T d1xu9a_ 171 DGFFSSIRKEYSVSRVNVSITLCVLGLIDT 200 (269)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEEEEECCBCC
T ss_pred HHHHHHHHHHhhhcCCCEEEEEEecCcCCC
Confidence 8887654 1357888899988755
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.29 E-value=4.8e-11 Score=116.86 Aligned_cols=228 Identities=14% Similarity=0.078 Sum_probs=132.0
Q ss_pred hcCCCEEEEECCcc--hhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 9 FLENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 9 ~~~~k~VlITGaTG--FlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
+++||++|||||+| -||.+++++|++.| .+|++..|+++.....+.+. ++ ...
T Consensus 2 ~L~gK~alITGaag~~GIG~AiA~~la~~G---a~V~i~~r~~~~~~~~~~l~-------------~~---------~~~ 56 (274)
T d2pd4a1 2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQG---ATLAFTYLNESLEKRVRPIA-------------QE---------LNS 56 (274)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTT---CEEEEEESSTTTHHHHHHHH-------------HH---------TTC
T ss_pred cCCCCEEEEECCCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHH-------------hh---------CCc
Confidence 68999999999987 79999999999999 78889999754322222111 11 244
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc--------cccHHHHH---HHhHHHHHHHHHHHHHccCce
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAF---GINTLGVIHLVNFAKKCVKLK 155 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f--------~~~~~~~~---~~Nv~gt~~ll~la~~~~~l~ 155 (570)
..++..|++++..-.+..+.....+..+|+++|+|+.... .+.+.... .++..+...+.....+..+-.
T Consensus 57 ~~~~~~d~~~~~~~~~~~~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (274)
T d2pd4a1 57 PYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNG 136 (274)
T ss_dssp CCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE
T ss_pred eeEeeecccchhhHHHHHHHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccC
Confidence 5577899985321100001111223569999999997532 12222222 223334444444443332333
Q ss_pred EEEEEeccee-ecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchHHHH
Q 008324 156 VFVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (570)
Q Consensus 156 ~~V~vSTa~v-~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
..|.+++... .... .....|+.+
T Consensus 137 ~~i~~~s~~~~~~~~--------------------------------------------------------~~~~~y~as 160 (274)
T d2pd4a1 137 ASVLTLSYLGSTKYM--------------------------------------------------------AHYNVMGLA 160 (274)
T ss_dssp EEEEEEECGGGTSBC--------------------------------------------------------TTCHHHHHH
T ss_pred cceeeeccccccccc--------------------------------------------------------ccchhhhHH
Confidence 4444333322 2110 235679999
Q ss_pred HHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHH
Q 008324 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..+.+++.. ..++++..+.|+.+..+....... ..........-. ...-+...+|+|
T Consensus 161 K~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~-------~~~~~~~~~~~~---------p~~r~~~pedIA 224 (274)
T d2pd4a1 161 KAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIAD-------FRMILKWNEINA---------PLRKNVSLEEVG 224 (274)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTT-------HHHHHHHHHHHS---------TTSSCCCHHHHH
T ss_pred HHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCc-------hHHHHHHHhhhh---------hccCCcCHHHHH
Confidence 99999988754 457999999999987754421111 011111111100 011246789999
Q ss_pred HHHHHHHHHhhCCCCCCceEEecCC
Q 008324 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
++++.++.+... --.++++.+.+|
T Consensus 225 ~~v~fL~S~~s~-~itG~~i~vDGG 248 (274)
T d2pd4a1 225 NAGMYLLSSLSS-GVSGEVHFVDAG 248 (274)
T ss_dssp HHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHhChhhC-CCcCceEEECCC
Confidence 999998864332 234789988887
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.23 E-value=2.9e-11 Score=118.77 Aligned_cols=131 Identities=17% Similarity=0.135 Sum_probs=88.6
Q ss_pred CCCEE-EEECCcchhHHHHHHHHHHh-CCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 11 ENKTI-LVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 11 ~~k~V-lITGaTGFlG~~LvekLl~~-~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.||+| +||||++-||++++++|++. | .+|++..|+.... +... +.|+++ ..++.
T Consensus 1 ~g~rVAlVTGas~GIG~a~A~~la~~~g---~~Vi~~~r~~~~~---~~~~---------~~l~~~---------~~~~~ 56 (275)
T d1wmaa1 1 SGIHVALVTGGNKGIGLAIVRDLCRLFS---GDVVLTARDVTRG---QAAV---------QQLQAE---------GLSPR 56 (275)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSS---SEEEEEESSHHHH---HHHH---------HHHHHT---------TCCCE
T ss_pred CCCeEEEECCCCCHHHHHHHHHHHHhCC---CEEEEEECCHHHH---HHHH---------HHHHhc---------CCcEE
Confidence 47777 89999999999999999987 6 6889999975332 1111 112222 25678
Q ss_pred EEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-------cccHHHHHHHhHHHHHHHHHHHHH-ccCceEEEEE
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-CVKLKVFVHV 160 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-------~~~~~~~~~~Nv~gt~~ll~la~~-~~~l~~~V~v 160 (570)
++.+|+++++.--.-.+...+-...+|++||+||.... ++.++..+++|+.|+..+.+.+.. |++-.++|.+
T Consensus 57 ~~~~Dvs~~~sv~~~~~~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivni 136 (275)
T d1wmaa1 57 FHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNV 136 (275)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEEEecCCHHHHHHHHHHHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 99999995321000001111123469999999997532 234667799999999999998865 3333579999
Q ss_pred eccee
Q 008324 161 STAYV 165 (570)
Q Consensus 161 STa~v 165 (570)
||...
T Consensus 137 sS~~~ 141 (275)
T d1wmaa1 137 SSIMS 141 (275)
T ss_dssp CCHHH
T ss_pred cccce
Confidence 98654
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.12 E-value=1.4e-10 Score=112.98 Aligned_cols=235 Identities=14% Similarity=0.045 Sum_probs=134.7
Q ss_pred hcCCCEEEEECCcc--hhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCc
Q 008324 9 FLENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 9 ~~~~k~VlITGaTG--FlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
.++||+++||||+| .||.+++++|++.| .+|++..|++.. ..+++. ++ ...+
T Consensus 3 ~l~gK~~lItGaag~~GIG~aiA~~la~~G---a~Vil~~~~~~~--~~~~~~-------------~~--------~~~~ 56 (268)
T d2h7ma1 3 LLDGKRILVSGIITDSSIAFHIARVAQEQG---AQLVLTGFDRLR--LIQRIT-------------DR--------LPAK 56 (268)
T ss_dssp TTTTCEEEECCCSSTTCHHHHHHHHHHHTT---CEEEEEECSCHH--HHHHHH-------------TT--------SSSC
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHcC---CEEEEEeCChHH--HHHHHH-------------HH--------cCCc
Confidence 57899999999765 49999999999999 678888886532 112222 11 1356
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHh---CCccEEEEcCccCC--------c-c---ccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 87 ITFVPGDISSEDLGLKDSNLKEELW---NELDIMVNSAAITK--------F-D---ERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~---~~vdiViH~AA~v~--------f-~---~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
...+.+|+++++--.+..+.....+ ..+|+++|+|+... + + +.+...+.+|+.+.......+...
T Consensus 57 ~~~~~~dv~~~~~~~~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (268)
T d2h7ma1 57 APLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPI 136 (268)
T ss_dssp CCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred eeeEeeecccccccccccchhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhh
Confidence 7788999995321000001111112 34799999998642 1 1 223344667777777777666654
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-...+.++|....... +....|
T Consensus 137 ~~~~~~i~~~s~~~~~~~--------------------------------------------------------p~~~~y 160 (268)
T d2h7ma1 137 MNPGGSIVGMDFDPSRAM--------------------------------------------------------PAYNWM 160 (268)
T ss_dssp EEEEEEEEEEECCCSSCC--------------------------------------------------------TTTHHH
T ss_pred cccccccccccccccccC--------------------------------------------------------cccchh
Confidence 333344444433222110 234679
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCcc---chHHHHHHHhcCCceeeecCCCeeeeee
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLK---TINTLFVASAQGNLRCLVGETKVIMDVI 303 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~---~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
+.+|+..+.+++.. ..++.+..|.|+.|-++..+.+.+...... ....+.....+..+ ...-+.
T Consensus 161 ~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--------l~rr~~ 232 (268)
T d2h7ma1 161 TVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAP--------IGWNMK 232 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCT--------TCCCTT
T ss_pred hccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCC--------CCCCCC
Confidence 99999999998765 457999999999987643221111111100 00111111111000 001134
Q ss_pred ehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
..+|+|+++..++.+... --.+++..+.+|
T Consensus 233 ~p~dva~~v~fL~Sd~a~-~iTG~~i~vDGG 262 (268)
T d2h7ma1 233 DATPVAKTVCALLSDWLP-ATTGDIIYADGG 262 (268)
T ss_dssp CCHHHHHHHHHHHSSSCT-TCCSEEEEESTT
T ss_pred CHHHHHHHHHHHhCchhc-CccCCEEEECcC
Confidence 578999999988853222 223788888776
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.07 E-value=9.8e-10 Score=104.91 Aligned_cols=210 Identities=11% Similarity=0.087 Sum_probs=131.9
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+++|||||+.||++++++|++.| .+|++..|++.+ .+...+.
T Consensus 1 DK~alITGas~GIG~aiA~~la~~G---a~V~i~~~~~~~---------------------------------~~~~~~~ 44 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARG---YRVVVLDLRREG---------------------------------EDLIYVE 44 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHT---CEEEEEESSCCS---------------------------------SSSEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCccc---------------------------------ccceEee
Confidence 5899999999999999999999999 678888887542 3455678
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCC-----------ccccHHHHHHHhHHHHHHHHHHHHHc---------
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-----------FDERYDVAFGINTLGVIHLVNFAKKC--------- 151 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~-----------f~~~~~~~~~~Nv~gt~~ll~la~~~--------- 151 (570)
+|++.........+.. ......+.+++.++... ..+.++..+++|+.+...+...+...
T Consensus 45 ~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 123 (241)
T d1uaya_ 45 GDVTREEDVRRAVARA-QEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAE 123 (241)
T ss_dssp CCTTCHHHHHHHHHHH-HHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTT
T ss_pred ccccchhhhHHHHHhh-hccccccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcc
Confidence 8888532111000100 11223455555554321 12345677899999988887766432
Q ss_pred cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchH
Q 008324 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (570)
Q Consensus 152 ~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.++|++||....... +....|
T Consensus 124 ~~~G~Ii~isS~~~~~~~--------------------------------------------------------~~~~~Y 147 (241)
T d1uaya_ 124 GQRGVIVNTASVAAFEGQ--------------------------------------------------------IGQAAY 147 (241)
T ss_dssp SCSEEEEEECCTHHHHCC--------------------------------------------------------TTCHHH
T ss_pred cCceeeeeecchhhccCC--------------------------------------------------------CCchhh
Confidence 123579999987543221 123579
Q ss_pred HHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehH
Q 008324 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.. ..++++..|.||.|-.+..... . ............ +.+ -+.-.+
T Consensus 148 ~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~-------~--~~~~~~~~~~~~--~~~------R~g~pe 210 (241)
T d1uaya_ 148 AASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL-------P--EKAKASLAAQVP--FPP------RLGRPE 210 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS-------C--HHHHHHHHTTCC--SSC------SCCCHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchh-------h--hhHHHHHHhcCC--CCC------CCcCHH
Confidence 99999999988765 4579999999999866432110 0 011111121111 101 123578
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
|+|+++..++.+ .--.|++..+.+|
T Consensus 211 dvA~~v~fL~s~---~~iTG~~i~VDGG 235 (241)
T d1uaya_ 211 EYAALVLHILEN---PMLNGEVVRLDGA 235 (241)
T ss_dssp HHHHHHHHHHHC---TTCCSCEEEESTT
T ss_pred HHHHHHHHHHhC---CCCCCCEEEECCc
Confidence 999999988752 2223788888776
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.02 E-value=3.4e-09 Score=104.48 Aligned_cols=240 Identities=13% Similarity=0.073 Sum_probs=135.5
Q ss_pred cCCCEEEEECCcc--hhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccc---cccC
Q 008324 10 LENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLN---SFIS 84 (570)
Q Consensus 10 ~~~k~VlITGaTG--FlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~---~~~~ 84 (570)
++||++|||||+| -||++++++|++.| .+|++..|++........... .......... ..-.
T Consensus 6 L~gK~alVTGass~~GIG~aiA~~la~~G---a~Vvi~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~ 72 (297)
T d1d7oa_ 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAG---AEILVGTWVPALNIFETSLRR----------GKFDQSRVLPDGSLMEI 72 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHTT---CEEEEEEEHHHHHHHHHHHHT----------TTTTGGGBCTTSSBCCE
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCC---CEEEEEeCchhhhhhHHHHHH----------hhhhhhhhhhhhhhhhh
Confidence 6899999999987 79999999999999 677888876432211111110 0000000000 0001
Q ss_pred CceEEEeccCCCCCCCC---------------CchhhHH---HHhCCccEEEEcCccCC-----cc----ccHHHHHHHh
Q 008324 85 EKITFVPGDISSEDLGL---------------KDSNLKE---ELWNELDIMVNSAAITK-----FD----ERYDVAFGIN 137 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgl---------------s~~~~~~---~l~~~vdiViH~AA~v~-----f~----~~~~~~~~~N 137 (570)
.++..+..++..+..-. +..+..+ .-+..+|++||+||... +. +.+...+++|
T Consensus 73 ~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn 152 (297)
T d1d7oa_ 73 KKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISAS 152 (297)
T ss_dssp EEEEEECTTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHH
T ss_pred hhhhhhhhhccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccch
Confidence 13444444443322110 0111111 22357999999998632 21 3467789999
Q ss_pred HHHHHHHHHHHHHcc-CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhh
Q 008324 138 TLGVIHLVNFAKKCV-KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKN 216 (570)
Q Consensus 138 v~gt~~ll~la~~~~-~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (570)
+.++..+.+.+.... .-...+.+|+........
T Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---------------------------------------------- 186 (297)
T d1d7oa_ 153 SYSFVSLLSHFLPIMNPGGASISLTYIASERIIP---------------------------------------------- 186 (297)
T ss_dssp THHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCT----------------------------------------------
T ss_pred hhhhhhhhhHHHHHhhcCCcceeeeehhhccccc----------------------------------------------
Confidence 999999998876542 222344444432211100
Q ss_pred ccccccccCCCCchHHHHHHHHHHHHHHh------ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCce
Q 008324 217 LGTERAKLHGWPNTYVFTKTMGEMLMQQS------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLR 290 (570)
Q Consensus 217 ~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~------~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~ 290 (570)
..+..|..+|+..+.+.+.. ..++++..+.|+.|..+..... ..............
T Consensus 187 ---------~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~-------~~~~~~~~~~~~~~-- 248 (297)
T d1d7oa_ 187 ---------GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI-------GFIDTMIEYSYNNA-- 248 (297)
T ss_dssp ---------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC-------SHHHHHHHHHHHHS--
T ss_pred ---------ccccceecccccccccccccchhccccceEEecccccccccchhhhhc-------cCCHHHHHHHHhCC--
Confidence 22456999998888876542 3589999999999977654221 11122222222111
Q ss_pred eeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 291 CLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 291 ~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
| ..-+.-.+|+|++++.++.+.+.- -.+++..+.+|
T Consensus 249 --P-----lgR~~~peevA~~v~fL~S~~a~~-itGq~i~vDGG 284 (297)
T d1d7oa_ 249 --P-----IQKTLTADEVGNAAAFLVSPLASA-ITGATIYVDNG 284 (297)
T ss_dssp --S-----SCCCBCHHHHHHHHHHHTSGGGTT-CCSCEEEESTT
T ss_pred --C-----CCCCCCHHHHHHHHHHHhCchhcC-CcCceEEECcC
Confidence 0 012356789999999888643322 23788888776
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.95 E-value=7.3e-09 Score=103.91 Aligned_cols=192 Identities=10% Similarity=0.091 Sum_probs=111.5
Q ss_pred CCCEEEEEC--CcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 11 ENKTILVSG--VTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 11 ~~k~VlITG--aTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
++|.+|||| ++.-||+.+++.|.+.| .+|++..|+............+ ++..+..... ........
T Consensus 1 n~kVAlITGaa~s~GIG~aiA~~la~~G---A~V~i~~~~~~~~~~~~~~~~~--------~~~~~~~~~~-~~~~~~~~ 68 (329)
T d1uh5a_ 1 NEDICFIAGIGDTNGYGWGIAKELSKRN---VKIIFGIWPPVYNIFMKNYKNG--------KFDNDMIIDK-DKKMNILD 68 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTT---CEEEEEECGGGHHHHHHHHHTT--------TTTGGGEETT-TEECCEEE
T ss_pred CCcEEEEeCCCCCChHHHHHHHHHHHcC---CEEEEEeCchhhhhhhHHHHHH--------hhhhHHHHHH-Hhhhhhhh
Confidence 478999999 55689999999999999 6777777765433221111100 0000000000 00011122
Q ss_pred EEeccCCCCCCC-------------CCch----hh---HHHHhCCccEEEEcCccCC-----cc----ccHHHHHHHhHH
Q 008324 89 FVPGDISSEDLG-------------LKDS----NL---KEELWNELDIMVNSAAITK-----FD----ERYDVAFGINTL 139 (570)
Q Consensus 89 ~v~gDl~~~~lg-------------ls~~----~~---~~~l~~~vdiViH~AA~v~-----f~----~~~~~~~~~Nv~ 139 (570)
....|+...... +.+. .. ......++|+++|+||... +. +.++..+++|+.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~ 148 (329)
T d1uh5a_ 69 MLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSY 148 (329)
T ss_dssp EEECCTTCSSGGGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTH
T ss_pred cccccceehhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchh
Confidence 333333311000 0011 11 1123457999999998642 21 457778999999
Q ss_pred HHHHHHHHHHH-ccCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhcc
Q 008324 140 GVIHLVNFAKK-CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLG 218 (570)
Q Consensus 140 gt~~ll~la~~-~~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 218 (570)
|+..+.+.+.. |++-.++|.+||...... .|
T Consensus 149 ~~~~~~k~~~~~m~~~GsIv~iss~~~~~~---------~p--------------------------------------- 180 (329)
T d1uh5a_ 149 SLISLCKYFVNIMKPQSSIISLTYHASQKV---------VP--------------------------------------- 180 (329)
T ss_dssp HHHHHHHHHGGGEEEEEEEEEEECGGGTSC---------CT---------------------------------------
T ss_pred HHHHHHHHHHhhcccccccccceeehhccc---------cc---------------------------------------
Confidence 99998888766 344457888876532211 10
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHHh----c--cCCcEEEEecCceecCCCCCCCc
Q 008324 219 TERAKLHGWPNTYVFTKTMGEMLMQQS----K--ENLSLVIIRPTVVSGTYKEPFPG 269 (570)
Q Consensus 219 ~~~~~~~~~~n~Y~~sK~~aE~lv~~~----~--~~lp~~IvRPsiV~g~~~ep~~g 269 (570)
++...|+.||+..|.+++.. . .++++..|.||.|-.+....+||
T Consensus 181 -------~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g 230 (329)
T d1uh5a_ 181 -------GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINK 230 (329)
T ss_dssp -------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC-
T ss_pred -------ccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccc
Confidence 23456999999999988754 2 48999999999886643333333
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=98.95 E-value=8.1e-08 Score=93.61 Aligned_cols=223 Identities=14% Similarity=0.073 Sum_probs=132.0
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
.++||||++-||++++++|++.| .+|++..|.... ..+.+.++ +.++. ......+.+|
T Consensus 4 VAlITGas~GIG~aiA~~la~~G---a~V~i~~~~~~~--~~~~~~~~---------l~~~~--------~~~~~~~~~d 61 (284)
T d1e7wa_ 4 VALVTGAAKRLGRSIAEGLHAEG---YAVCLHYHRSAA--EANALSAT---------LNARR--------PNSAITVQAD 61 (284)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHH---------HHHHS--------TTCEEEEECC
T ss_pred EEEEeCCCCHHHHHHHHHHHHcC---CEEEEEeCCCHH--HHHHHHHH---------HHhhc--------CCceEEEEee
Confidence 57999999999999999999999 677777765422 12222211 12221 2345555555
Q ss_pred CCCCCC----------CCCchhhHHHHh-------CCccEEEEcCccCCcc-------c--------------cHHHHHH
Q 008324 94 ISSEDL----------GLKDSNLKEELW-------NELDIMVNSAAITKFD-------E--------------RYDVAFG 135 (570)
Q Consensus 94 l~~~~l----------gls~~~~~~~l~-------~~vdiViH~AA~v~f~-------~--------------~~~~~~~ 135 (570)
...+.. .+++.+..+.++ ..+|++||+||..... + .+...+.
T Consensus 62 ~~~~~~~~~~~~~~~~dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (284)
T d1e7wa_ 62 LSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFG 141 (284)
T ss_dssp CSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHH
T ss_pred cccccccccccccccccCCCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHh
Confidence 443221 122444444433 4699999999975321 1 1223578
Q ss_pred HhHHHHHHHHHHHHHc---------cCceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCC
Q 008324 136 INTLGVIHLVNFAKKC---------VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAP 206 (570)
Q Consensus 136 ~Nv~gt~~ll~la~~~---------~~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 206 (570)
+|+.++..+.+.+.+. .+..++|.+|+.......
T Consensus 142 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~s~~~~~~~------------------------------------- 184 (284)
T d1e7wa_ 142 SNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL------------------------------------- 184 (284)
T ss_dssp HHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCC-------------------------------------
T ss_pred hheeeeeeeeccccchhhhhHHHhcCCCCcccccccccccCCc-------------------------------------
Confidence 8999998888876542 122356666655322111
Q ss_pred hhHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHH
Q 008324 207 QKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLF 281 (570)
Q Consensus 207 ~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i 281 (570)
.....|+.||+..+.+.+.. ..++++..|.||.+-.... ......
T Consensus 185 -------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~-----------~~~~~~ 234 (284)
T d1e7wa_ 185 -------------------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD-----------MPPAVW 234 (284)
T ss_dssp -------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGG-----------SCHHHH
T ss_pred -------------------cceeeeccccccchhhhHHHHHHhCCcccccccccccccccccc-----------CCHHHH
Confidence 12357999999999988765 4589999999986322111 111222
Q ss_pred HHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 282 VASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 282 ~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
........ +. .-+...+|+|++++.++.+.+. --.|++..+.+|
T Consensus 235 ~~~~~~~p--l~------~R~~~peeiA~~v~fL~S~~s~-~itG~~i~VDGG 278 (284)
T d1e7wa_ 235 EGHRSKVP--LY------QRDSSAAEVSDVVIFLCSSKAK-YITGTCVKVDGG 278 (284)
T ss_dssp HHHHTTCT--TT------TSCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHhcCC--CC------CCCCCHHHHHHHHHHHhCchhc-CccCCeEEECcC
Confidence 23322211 00 1134678999999988864332 223788888777
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=98.86 E-value=2.1e-07 Score=89.51 Aligned_cols=220 Identities=13% Similarity=0.117 Sum_probs=128.2
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
+.+||||++-||++++++|++.| .+|++..|+.... .+++.+++ .+.. ..+...+..|
T Consensus 3 vAlVTGas~GIG~aia~~la~~G---~~Vvi~~r~~~~~--~~~~~~~~---------~~~~--------~~~~~~~~~~ 60 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQG---FRVVVHYRHSEGA--AQRLVAEL---------NAAR--------AGSAVLCKGD 60 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHH--HHHHHHHH---------HHHS--------TTCEEEEECC
T ss_pred EEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCchHH--HHHHHHHH---------Hhhc--------CCceEEEecc
Confidence 67999999999999999999999 7889999875432 22222111 1111 2456666666
Q ss_pred CCCCCCCCCchhhHHH-------HhCCccEEEEcCccCCcc------------------ccHHHHHHHhHHHHHHHHHHH
Q 008324 94 ISSEDLGLKDSNLKEE-------LWNELDIMVNSAAITKFD------------------ERYDVAFGINTLGVIHLVNFA 148 (570)
Q Consensus 94 l~~~~lgls~~~~~~~-------l~~~vdiViH~AA~v~f~------------------~~~~~~~~~Nv~gt~~ll~la 148 (570)
+.+... .++..+. -+..+|++||+||..... ..+......|..+.......+
T Consensus 61 ~~~~~~---~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (266)
T d1mxha_ 61 LSLSSS---LLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAF 137 (266)
T ss_dssp CSSSTT---HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred cccchh---HHHHHHHHHHHHHHHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhh
Confidence 653211 2222222 234699999999964311 112234556666666665555
Q ss_pred HHcc--------CceEEEEEecceeecCCCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhcccc
Q 008324 149 KKCV--------KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTE 220 (570)
Q Consensus 149 ~~~~--------~l~~~V~vSTa~v~~~~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 220 (570)
.... ....++.+|+......
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------------- 165 (266)
T d1mxha_ 138 ARRQGEGGAWRSRNLSVVNLCDAMTDLP---------------------------------------------------- 165 (266)
T ss_dssp HHTC-------CCCEEEEEECCGGGGSC----------------------------------------------------
T ss_pred ccccccccccccccccchhhhhcccccc----------------------------------------------------
Confidence 4421 1122333333221111
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHh-----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecC
Q 008324 221 RAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGE 295 (570)
Q Consensus 221 ~~~~~~~~n~Y~~sK~~aE~lv~~~-----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~ 295 (570)
.+....|+.||+..+.+.+.. ..++++..|.||.|..+...+ ......+..... .+
T Consensus 166 ----~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~-----------~~~~~~~~~~~p---l~- 226 (266)
T d1mxha_ 166 ----LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP-----------QETQEEYRRKVP---LG- 226 (266)
T ss_dssp ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC-----------HHHHHHHHTTCT---TT-
T ss_pred ----CcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC-----------HHHHHHHHhcCC---CC-
Confidence 023468999999999988755 458999999999886543211 112222222211 00
Q ss_pred CCeeeeeeehHHHHHHHHHHHHHhhCCCCCCceEEecCC
Q 008324 296 TKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 296 ~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyni~s~ 334 (570)
.-+...+|+|++++.++.+... --.|+++++.+|
T Consensus 227 ----r~~~~peeva~~v~fL~s~~s~-~itG~~i~vDGG 260 (266)
T d1mxha_ 227 ----QSEASAAQIADAIAFLVSKDAG-YITGTTLKVDGG 260 (266)
T ss_dssp ----SCCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred ----CCCCCHHHHHHHHHHHhCchhC-CccCCeEEECcc
Confidence 1124578999999988864332 223788888776
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.72 E-value=4.6e-07 Score=86.71 Aligned_cols=235 Identities=11% Similarity=0.038 Sum_probs=123.3
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|.|+||||+|.||++++++|++.| .+|+++.|++... ..
T Consensus 2 kVvlITGas~GIG~aiA~~la~~G---a~V~~~~~~~~~~--------------------------------------~~ 40 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLEAAG---HQIVGIDIRDAEV--------------------------------------IA 40 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSSSSE--------------------------------------EC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECChHHH--------------------------------------HH
Confidence 679999999999999999999999 6788888864321 12
Q ss_pred cCCCCCCCCC-chhhHHHHhCCccEEEEcCccCCccccHHHHHHHhHHHHHHHHHHHHHc---cCceEEEEEecceeecC
Q 008324 93 DISSEDLGLK-DSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHVSTAYVAGE 168 (570)
Q Consensus 93 Dl~~~~lgls-~~~~~~~l~~~vdiViH~AA~v~f~~~~~~~~~~Nv~gt~~ll~la~~~---~~l~~~V~vSTa~v~~~ 168 (570)
|+.+..-... ..+........+|+++|+|+.....+.+.....+|..+...+.+..... .+......+++......
T Consensus 41 d~~~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (257)
T d1fjha_ 41 DLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHL 120 (257)
T ss_dssp CTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSS
T ss_pred HhcCHHHHHHHHHHHHHHhCCCCcEEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccch
Confidence 3332100000 0000001123589999999987777778888889999988877655432 13344455554322211
Q ss_pred CCcccccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCC--CchHHHHHHHHHHHHHHh-
Q 008324 169 RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW--PNTYVFTKTMGEMLMQQS- 245 (570)
Q Consensus 169 ~~g~i~E~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~n~Y~~sK~~aE~lv~~~- 245 (570)
.. .. .+....... -..-.+.... ...+.. ...|+.||+..+.+.+..
T Consensus 121 ~~----~~-----~~~~~~~~~--------------g~~~~i~s~~-------~~~~~~~~~~~Y~asKaal~~ltr~lA 170 (257)
T d1fjha_ 121 AF----DK-----NPLALALEA--------------GEEAKARAIV-------EHAGEQGGNLAYAGSKNALTVAVRKRA 170 (257)
T ss_dssp CG----GG-----CTTHHHHHH--------------TCHHHHHHHH-------HTCCTTHHHHHHHHHHHHHHHHHHHTH
T ss_pred hh----hh-----hhhhhhccC--------------CcEEEEeeeh-------hccCCCcchHHHHHHhhhhhccccccc
Confidence 00 00 000000000 0000000000 000011 135999999999998865
Q ss_pred ----ccCCcEEEEecCceecCCCCCCCccccCccchHHHHHHHhcCCceeeecCCCeeeeeeehHHHHHHHHHHHHHhhC
Q 008324 246 ----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAK 321 (570)
Q Consensus 246 ----~~~lp~~IvRPsiV~g~~~ep~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~ 321 (570)
..++++..|.|+.|-.+..+. .+.+. .......+.. ....-+...+|+|+++..++.+.+.
T Consensus 171 ~el~~~gIrVN~I~PG~i~T~~~~~--~~~~~-----~~~~~~~~~~--------~PlgR~g~p~eva~~v~fL~S~~s~ 235 (257)
T d1fjha_ 171 AAWGEAGVRLNTIAPGATETPLLQA--GLQDP-----RYGESIAKFV--------PPMGRRAEPSEMASVIAFLMSPAAS 235 (257)
T ss_dssp HHHHHTTCEEEEEEECC----------------------------CC--------CSTTSCCCTHHHHHHHHHHTSGGGT
T ss_pred cccccccccccccccCCcCChhHHh--hcCCH-----HHHHHHHhcC--------CCCCCCcCHHHHHHHHHHHhCchhC
Confidence 558999999999987653311 00000 0000011100 0011134579999999988764332
Q ss_pred CCCCCceEEecCC
Q 008324 322 QPSDANIYHVGSS 334 (570)
Q Consensus 322 ~~~~~~iyni~s~ 334 (570)
--.|++..+.+|
T Consensus 236 -~itG~~i~vDGG 247 (257)
T d1fjha_ 236 -YVHGAQIVIDGG 247 (257)
T ss_dssp -TCCSCEEEESTT
T ss_pred -CccCceEEeCCC
Confidence 223788888776
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.61 E-value=2.4e-08 Score=92.03 Aligned_cols=84 Identities=15% Similarity=0.131 Sum_probs=62.5
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
-++||+|+||||+|.||+.+++.|++.| .+|++..|+.... +.+. +.+.++ .++.
T Consensus 20 ~l~gK~vlItGasgGIG~~ia~~la~~G---~~V~~~~r~~~~~---~~~~---------~~~~~~----------~~~~ 74 (191)
T d1luaa1 20 SVKGKKAVVLAGTGPVGMRSAALLAGEG---AEVVLCGRKLDKA---QAAA---------DSVNKR----------FKVN 74 (191)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSHHHH---HHHH---------HHHHHH----------HTCC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHhhc---cchhhcccchHHH---HHHH---------HHHHhc----------cchh
Confidence 3689999999999999999999999999 6788999975332 1111 111111 2344
Q ss_pred EEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccC
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAIT 124 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v 124 (570)
...+|++ +.+..++.++++|+|||+||..
T Consensus 75 ~~~~d~~-------~~~~~~~~~~~iDilin~Ag~g 103 (191)
T d1luaa1 75 VTAAETA-------DDASRAEAVKGAHFVFTAGAIG 103 (191)
T ss_dssp CEEEECC-------SHHHHHHHTTTCSEEEECCCTT
T ss_pred hhhhhcc-------cHHHHHHHhcCcCeeeecCccc
Confidence 6778988 5555678889999999999863
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.34 E-value=0.00043 Score=59.60 Aligned_cols=115 Identities=16% Similarity=0.152 Sum_probs=73.5
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
+|.|+||+|.+|+.++-.|...+ -+.++.++...+.. .+.+ ++. +... ... ...-
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~-~~~elvLiDi~~~~---~~a~--Dl~-----------~~~~-----~~~---~~~~ 56 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSP-LVSRLTLYDIAHTP---GVAA--DLS-----------HIET-----RAT---VKGY 56 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCT-TCSEEEEEESSSHH---HHHH--HHT-----------TSSS-----SCE---EEEE
T ss_pred eEEEECCCChHHHHHHHHHHhCC-ccceEEEEeccccc---hhhH--HHh-----------hhhh-----hcC---CCeE
Confidence 79999999999999988777654 56788887764321 1111 121 1000 011 1111
Q ss_pred CCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEec
Q 008324 94 ISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (570)
Q Consensus 94 l~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vST 162 (570)
+. ..+. .+.++++|+|+-+||..+- .+.....++.|+.-.+.+++.+++. +.+.++.+-|
T Consensus 57 ~~-------~~~~-~~~~~~aDivVitag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~-~p~~iiivvt 117 (144)
T d1mlda1 57 LG-------PEQL-PDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQH-CPDAMICIIS 117 (144)
T ss_dssp ES-------GGGH-HHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEECS
T ss_pred Ec-------CCCh-HHHhCCCCEEEECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhc-CCCeEEEEec
Confidence 22 2222 3556899999999997532 2344456899999999999999987 6666666554
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.16 E-value=0.0036 Score=53.58 Aligned_cols=119 Identities=13% Similarity=0.085 Sum_probs=73.2
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE-e
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV-P 91 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v-~ 91 (570)
++|.|.||+|.+|..++..|+.++ -+.++.++.+.+.-. ..+.+..++..... ....++... .
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~-l~~el~L~D~~~~~~-~~~g~a~Dl~~~~~--------------~~~~~~~~~~~ 64 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEP-FMKDLVLIGREHSIN-KLEGLREDIYDALA--------------GTRSDANIYVE 64 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCT-TCCEEEEEECGGGHH-HHHHHHHHHHHHHT--------------TSCCCCEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCC-cccccccccchhhhH-hhhcccccchhccc--------------ccccCCccccC
Confidence 579999999999999999888764 346788887764321 11111112211100 011233332 2
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEE
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~v 160 (570)
++ .+. +.++++|+|+-+||..+- .++-...++.|..-.+.+.+...+. +.+.++.+
T Consensus 65 ~~----------~d~--~~l~~aDvVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~-~~~~iivV 121 (145)
T d1hyea1 65 SD----------ENL--RIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI-CDTKIFVI 121 (145)
T ss_dssp ET----------TCG--GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CCCEEEEC
T ss_pred Cc----------chH--HHhccceEEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhcc-CCCeEEEE
Confidence 21 111 334789999999997643 3455667899999999999988876 33444434
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.11 E-value=0.0013 Score=56.46 Aligned_cols=116 Identities=17% Similarity=0.154 Sum_probs=71.5
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|+||+|.+|+.++-.|....+.+.++.++...+. .. .+.+ ++.... .......+.+
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~-~~-g~a~--Dl~h~~----------------~~~~~~~~~~ 60 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV-TP-GVAV--DLSHIP----------------TAVKIKGFSG 60 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTT-HH-HHHH--HHHTSC----------------SSCEEEEECS
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEeccccc-ch-hHHH--HHHCCc----------------cccCCcEEEc
Confidence 58999999999999999887665445677777765432 11 1111 221110 0122222322
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceE-EEEEe
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKV-FVHVS 161 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~-~V~vS 161 (570)
+ .+ . +.+++.|+|+-+||..+- .+.....++.|..-.+.+.+...+. +.+. ++.+|
T Consensus 61 ~----------~~-~-~~~~~aDvvvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~-~p~aivivvt 118 (145)
T d2cmda1 61 E----------DA-T-PALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKT-CPKACIGIIT 118 (145)
T ss_dssp S----------CC-H-HHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEECS
T ss_pred C----------CC-c-cccCCCCEEEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhh-CCCcEEEEcc
Confidence 1 12 2 345789999999997532 3344556899999999999988886 3333 44444
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=96.93 E-value=0.0042 Score=53.26 Aligned_cols=117 Identities=12% Similarity=0.107 Sum_probs=71.2
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+.++|.|.|+ |.+|..++..|+..+ -+.+|+++.+.+.....+. .++.....+ .......
T Consensus 4 ~~~KI~IIGa-G~VG~~~A~~l~~~~-~~~elvL~D~~~~~~~g~a---~Dl~~a~~~---------------~~~~~~~ 63 (146)
T d1ez4a1 4 NHQKVVLVGD-GAVGSSYAFAMAQQG-IAEEFVIVDVVKDRTKGDA---LDLEDAQAF---------------TAPKKIY 63 (146)
T ss_dssp TBCEEEEECC-SHHHHHHHHHHHHHT-CCSEEEEECSSHHHHHHHH---HHHHGGGGG---------------SCCCEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcC-CCcEEEEeecccchhHHHH---HHHhccccc---------------cCCceEe
Confidence 4679999995 999999999999876 3467888887543221111 022111000 1223444
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEec
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vST 162 (570)
.+|.. .+.++|+|+.+|+..+- .......+..|+.-.+.+.+...+. +.+.++.+-|
T Consensus 64 ~~d~~--------------~~~~adivvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~-~p~aivivvt 121 (146)
T d1ez4a1 64 SGEYS--------------DCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLVAA 121 (146)
T ss_dssp ECCGG--------------GGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred eccHH--------------HhccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhc-CCCcEEEEeC
Confidence 55532 13689999999987542 2334455789999999999988886 5666655544
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=96.77 E-value=0.0084 Score=52.91 Aligned_cols=112 Identities=13% Similarity=0.065 Sum_probs=68.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhC----CCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQ----PNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~----~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
-+.-+|.||||+|.||..++-.|++.. ...-.+.++..++.... .+-+.-++... ...
T Consensus 22 k~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~-l~g~~mdl~d~-----------------a~~ 83 (175)
T d7mdha1 22 KKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQA-LEGVAMELEDS-----------------LYP 83 (175)
T ss_dssp CCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHH-HHHHHHHHHTT-----------------TCT
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccch-hcchhhhhccc-----------------ccc
Confidence 344589999999999999999988632 11124555544442221 11111011110 012
Q ss_pred ceEE-EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 86 KITF-VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 86 kv~~-v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~-f~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
.+.. +.++ . ..+.++++|+||-+||..+ ..+...+.+..|+.-.+.+.+...+.
T Consensus 84 ~~~~~~~~~----------~--~~~~~~~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~ 139 (175)
T d7mdha1 84 LLREVSIGI----------D--PYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAV 139 (175)
T ss_dssp TEEEEEEES----------C--HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCccccc----------c--chhhccCCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 2222 2221 1 1256689999999998864 34566778999999999999999885
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=96.71 E-value=0.019 Score=49.34 Aligned_cols=112 Identities=8% Similarity=-0.029 Sum_probs=66.3
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCC--Ccc-EEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceE
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQP--NVK-KLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~--~V~-~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.++|.|+||+|++|++++-.|+.... +.. -..-+.-........+....++. . .......
T Consensus 4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-----------~------~~~~~~~ 66 (154)
T d1y7ta1 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELE-----------D------CAFPLLA 66 (154)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHH-----------T------TTCTTEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhh-----------c------ccccccc
Confidence 45899999999999999999986431 001 11222222222222221111110 0 0112333
Q ss_pred EEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
.+...-. + .+.++++|+|+-+||..+- .++....+..|+.-.+.+.+...+.
T Consensus 67 ~~~~~~~---------~--~~~~~~advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~ 119 (154)
T d1y7ta1 67 GLEATDD---------P--KVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEV 119 (154)
T ss_dssp EEEEESC---------H--HHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCc---------h--hhhcccccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333211 1 2556899999999998653 3455677899999999999988884
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=96.70 E-value=0.016 Score=49.23 Aligned_cols=113 Identities=12% Similarity=0.003 Sum_probs=72.1
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHH-HHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAA-LRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~-~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
+|.|+||+|.+|+.++-.|+.++ -+.++.++..+.+..... +.+ ++...- + +..+.....+
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~-l~~el~L~Di~~~~~~~~g~a~--Dl~~~~---------~------~~~~~~i~~~ 63 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRD-IADEVVFVDIPDKEDDTVGQAA--DTNHGI---------A------YDSNTRVRQG 63 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CCSEEEEECCGGGHHHHHHHHH--HHHHHH---------T------TTCCCEEEEC
T ss_pred eEEEECCCCcHHHHHHHHHHhCC-CCCEEEEEecCCcccccceeec--chhhcc---------c------ccCCceEeeC
Confidence 79999999999999999998875 346777776543221111 111 221110 0 1234444445
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
|.. + +.+.|+|+-+|+..+- .+...+.++.|..-.+.+.+..++. +.+.++.
T Consensus 64 ~~~---------~-----~~~aDiVvitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~-~p~~i~i 116 (142)
T d1o6za1 64 GYE---------D-----TAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISL 116 (142)
T ss_dssp CGG---------G-----GTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEE
T ss_pred CHH---------H-----hhhcCEEEEecccccccCCchhhHHHHHHHHHHHHHHHHHhc-CCCceEE
Confidence 422 2 3689999999986543 3445667899999999999988886 4444443
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.69 E-value=0.0045 Score=51.87 Aligned_cols=71 Identities=14% Similarity=0.235 Sum_probs=49.8
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+|.|+ |.+|+.|++.|.+.| ..|.++.+++. ..+++. ++ -.+..+.|
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g---~~v~vid~d~~---~~~~~~-------------~~----------~~~~vi~G 50 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKG---HDIVLIDIDKD---ICKKAS-------------AE----------IDALVING 50 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCHH---HHHHHH-------------HH----------CSSEEEES
T ss_pred CEEEEECC-CHHHHHHHHHHHHCC---CCcceecCChh---hhhhhh-------------hh----------hhhhhccC
Confidence 68999997 999999999999988 56677766432 112222 11 24678999
Q ss_pred cCCCCCCCCCchhhHHHH-hCCccEEEEc
Q 008324 93 DISSEDLGLKDSNLKEEL-WNELDIMVNS 120 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l-~~~vdiViH~ 120 (570)
|.+ +.+.++.+ ++++|.++-+
T Consensus 51 d~~-------~~~~l~~~~i~~a~~vv~~ 72 (132)
T d1lssa_ 51 DCT-------KIKTLEDAGIEDADMYIAV 72 (132)
T ss_dssp CTT-------SHHHHHHTTTTTCSEEEEC
T ss_pred ccc-------chhhhhhcChhhhhhhccc
Confidence 999 55555444 4678888864
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.50 E-value=0.0075 Score=51.71 Aligned_cols=115 Identities=13% Similarity=0.134 Sum_probs=71.7
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+++|.|.|| |.+|..++..|+..+ -+.+++++.+.+...... . .++.... .+....+...
T Consensus 5 ~~~KI~IiGa-G~vG~~~a~~l~~~~-l~~el~L~Di~~~~~~g~-a--~Dl~~~~--------------~~~~~~~~~~ 65 (148)
T d1ldna1 5 GGARVVVIGA-GFVGASYVFALMNQG-IADEIVLIDANESKAIGD-A--MDFNHGK--------------VFAPKPVDIW 65 (148)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHT-CCSEEEEECSSHHHHHHH-H--HHHHHHT--------------TSSSSCCEEE
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhcC-CCceEEEEeeccccccch-h--ccHhhCc--------------cccCCCeEEE
Confidence 4679999997 999999999998876 356788887754322111 1 0221110 1112334444
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEE
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~ 159 (570)
.+|. +.+++.|+|+.+|+..+- .+.....+..|+.-.+.+.+...+. +.+.++.
T Consensus 66 ~~d~--------------~~l~daDvvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~~i 120 (148)
T d1ldna1 66 HGDY--------------DDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS-GFQGLFL 120 (148)
T ss_dssp ECCG--------------GGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH-TCCSEEE
T ss_pred ECCH--------------HHhccceeEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhh-CCCceEE
Confidence 4442 224689999999987542 2333445788999999998888776 4444433
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.49 E-value=0.00087 Score=57.71 Aligned_cols=38 Identities=13% Similarity=0.282 Sum_probs=30.5
Q ss_pred CEEEEECCcchhHHHHHHHHHHhC-CCccEEEEEEcCCC
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQ-PNVKKLYLFVRAAD 50 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~-~~V~~V~~lvR~~~ 50 (570)
|+|.|.||||++|+.+++.|+++. ..+..++++.+++.
T Consensus 2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s 40 (146)
T d1t4ba1 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL 40 (146)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST
T ss_pred cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccc
Confidence 689999999999999999998752 34567887776653
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=96.42 E-value=0.038 Score=46.61 Aligned_cols=115 Identities=15% Similarity=0.049 Sum_probs=71.9
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|+|| |.+|..++..|+..+ -+.++.++.+.+........ ++.....+ ...+......
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~-l~~el~L~Di~~~~~~~~~~---d~~~~~~~--------------~~~~~~i~~~ 61 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQ-LARELVLLDVVEGIPQGKAL---DMYESGPV--------------GLFDTKVTGS 61 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-CCSEEEEECSSSSHHHHHHH---HHHTTHHH--------------HTCCCEEEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCC-CCceEEEeccccccchhhhh---hhhcccch--------------hcccceEEec
Confidence 57999996 999999999888865 35688888877654322211 12111111 0123333221
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEE
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~-f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~v 160 (570)
+ +. +.++++|+|+-+||..+ ..+.-...++.|..-.+.+.+...+. +.+.++.+
T Consensus 62 ~---------~~----~~~~dadvvvitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~-~p~aiviv 116 (142)
T d1guza1 62 N---------DY----ADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKH-SKNPIIIV 116 (142)
T ss_dssp S---------CG----GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CSSCEEEE
T ss_pred C---------CH----HHhcCCeEEEEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhcc-CCCeEEEE
Confidence 1 11 23478999999998753 33445566889999999999888876 44454443
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=96.32 E-value=0.028 Score=47.59 Aligned_cols=113 Identities=14% Similarity=0.090 Sum_probs=68.4
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|.|| |.+|..++-.|+..+ -+.+++++.+.+.......- ++... . . ...+.....+
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~-l~~el~L~D~~~~~~~g~a~---Dl~~~-----------~---~-~~~~~~~~~~ 61 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQ-TANELVLIDVFKEKAIGEAM---DINHG-----------L---P-FMGQMSLYAG 61 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTT-CSSEEEEECCC---CCHHHH---HHTTS-----------C---C-CTTCEEEC--
T ss_pred CeEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeccCCccceeee---eeccC-----------c---c-cCCCeeEeeC
Confidence 47888997 999999999998865 45788888877654332211 22110 0 1 1233333333
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEE
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~-f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~v 160 (570)
|. +.+++.|+|+-+|+..+ ..+.....+..|+.-.+.+.+...+. +.+.++.+
T Consensus 62 ~~--------------~~~~~adivvitag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~-~p~ai~iv 115 (142)
T d1y6ja1 62 DY--------------SDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILV 115 (142)
T ss_dssp CG--------------GGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEE
T ss_pred cH--------------HHhCCCceEEEecccccCcCcchhHHhhHHHHHHHHHHHHhhcc-CCCceEEE
Confidence 21 22478999999998754 23455667899999999999988886 44444433
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=96.30 E-value=0.01 Score=52.65 Aligned_cols=85 Identities=21% Similarity=0.281 Sum_probs=56.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+|.|+ |..|++++..|++.+ +++|++..|.+......+.+ ++++... .....
T Consensus 16 l~~k~vlIlGa-GGaarai~~al~~~g--~~~i~i~nR~~~~~~~~~~l---------~~~~~~~----------~~~~~ 73 (182)
T d1vi2a1 16 IKGKTMVLLGA-GGASTAIGAQGAIEG--LKEIKLFNRRDEFFDKALAF---------AQRVNEN----------TDCVV 73 (182)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTT--CSEEEEEECSSTTHHHHHHH---------HHHHHHH----------SSCEE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHhhcC--CceEeeeccchHHHHHHHHH---------HHHHHhh----------cCcce
Confidence 57899999996 778999999999976 47899999987654332222 2222222 12234
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCcc
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAI 123 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~ 123 (570)
...|+. +.+.......++|+|||+...
T Consensus 74 ~~~~~~-------~~~~~~~~~~~~diiIN~Tp~ 100 (182)
T d1vi2a1 74 TVTDLA-------DQQAFAEALASADILTNGTKV 100 (182)
T ss_dssp EEEETT-------CHHHHHHHHHTCSEEEECSST
T ss_pred Eeeecc-------cccchhhhhcccceeccccCC
Confidence 456666 333334566789999999654
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=96.27 E-value=0.026 Score=48.49 Aligned_cols=119 Identities=13% Similarity=0.130 Sum_probs=71.6
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+.++|.|.|| |.+|+.++..|...+ +.+++++...+........ ++.....+ ........
T Consensus 6 k~~KI~IIGa-G~VG~~lA~~l~~~~--~~el~L~D~~~~~~~g~a~---Dl~~~~~~--------------~~~~~~~~ 65 (154)
T d1pzga1 6 RRKKVAMIGS-GMIGGTMGYLCALRE--LADVVLYDVVKGMPEGKAL---DLSHVTSV--------------VDTNVSVR 65 (154)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHT--CCEEEEECSSSSHHHHHHH---HHHHHHHH--------------TTCCCCEE
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCC--CceEEEEEeccccchhHHH---HHhhhccc--------------cCCeeEEe
Confidence 3579999997 999999998777765 4577777665543222111 22111000 00111111
Q ss_pred eccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc------ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEec
Q 008324 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD------ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~------~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vST 162 (570)
+. .+ .++.+++.|+|+-+|+..+-. ..-...+..|+.-.+.+++.+.+. +.+.++.+-|
T Consensus 66 -~~----------~~-~~~~~~~adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~-~p~aiviivs 130 (154)
T d1pzga1 66 -AE----------YS-YEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY-CPKTFIIVVT 130 (154)
T ss_dssp -EE----------CS-HHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECC
T ss_pred -cc----------Cc-hhhhhcCCCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhc-CCCcEEEEeC
Confidence 11 11 234568899999999875421 123445788999999999988886 5566665544
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=96.17 E-value=0.0037 Score=54.61 Aligned_cols=36 Identities=22% Similarity=0.409 Sum_probs=31.6
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~ 50 (570)
++|+|+|.|| |++|+.+++.|.+.| ++|++..|+..
T Consensus 1 ~~K~IliiGa-G~~G~~~a~~L~~~g---~~V~v~dr~~~ 36 (182)
T d1e5qa1 1 ATKSVLMLGS-GFVTRPTLDVLTDSG---IKVTVACRTLE 36 (182)
T ss_dssp CCCEEEEECC-STTHHHHHHHHHTTT---CEEEEEESCHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCC---CEEEEEECChH
Confidence 4799999986 999999999999988 67889989764
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=96.11 E-value=0.0053 Score=56.52 Aligned_cols=80 Identities=13% Similarity=0.147 Sum_probs=52.0
Q ss_pred cCCCEEEEECC----------------cchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHh
Q 008324 10 LENKTILVSGV----------------TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKE 73 (570)
Q Consensus 10 ~~~k~VlITGa----------------TGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~ 73 (570)
++|++||||+| ||-+|.+|++.+.+.| ..|.++..+.....
T Consensus 4 l~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~G---a~V~li~g~~~~~~-------------------- 60 (223)
T d1u7za_ 4 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRG---ANVTLVSGPVSLPT-------------------- 60 (223)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTT---CEEEEEECSCCCCC--------------------
T ss_pred cCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcC---CchhhhhcccccCc--------------------
Confidence 67999999975 7999999999999999 55566555432110
Q ss_pred hhccccccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc
Q 008324 74 KWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD 127 (570)
Q Consensus 74 ~~~~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~ 127 (570)
...+..+...-.+. -.+.....+++.|++|++||...|.
T Consensus 61 ----------p~~~~~~~~~t~~~-----m~~~~~~~~~~~D~~i~aAAvsDf~ 99 (223)
T d1u7za_ 61 ----------PPFVKRVDVMTALE-----MEAAVNASVQQQNIFIGCAAVADYR 99 (223)
T ss_dssp ----------CTTEEEEECCSHHH-----HHHHHHHHGGGCSEEEECCBCCSEE
T ss_pred ----------ccccccceehhhHH-----HHHHHHhhhccceeEeeeechhhhh
Confidence 13444444321100 1112224456899999999998774
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=96.11 E-value=0.051 Score=45.72 Aligned_cols=114 Identities=14% Similarity=0.123 Sum_probs=72.0
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|.|| |.+|..++..|+.++ -+.++.++.+.+..... +.+ ++..... +..+.....+
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~-l~~el~L~Di~~~~~~g-~~~--Dl~~~~~---------------~~~~~~~~~~ 60 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKG-FAREMVLIDVDKKRAEG-DAL--DLIHGTP---------------FTRRANIYAG 60 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHT-CCSEEEEECSSHHHHHH-HHH--HHHHHGG---------------GSCCCEEEEC
T ss_pred CEEEEECc-CHHHHHHHHHHHhCC-CCCEEEEEecccccccc-hhc--ccccccc---------------ccccccccCC
Confidence 58999996 999999998888876 35678888766432111 111 2211100 1234444444
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEe
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vS 161 (570)
|. +.+++.|+|+-+|+..+- ...-...+..|..-.+.+.+...+. +.+.++.+-
T Consensus 61 ~~--------------~~~~~adivvitag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~-~p~aivivv 115 (140)
T d1a5za1 61 DY--------------ADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKY-APDSIVIVV 115 (140)
T ss_dssp CG--------------GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEC
T ss_pred cH--------------HHhcCCCEEEEecccccCCCcchhhhhccccchHHHHHHHHHhc-CCCcEEEEe
Confidence 32 224789999999998653 3444566888999999998888886 445555543
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=96.06 E-value=0.041 Score=46.57 Aligned_cols=114 Identities=14% Similarity=0.093 Sum_probs=71.1
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
.+|.|.|+ |.+|..++-.|+.++ -+.++.++.+.+..... +.+ ++.....| ........+
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~~-l~~ElvL~D~~~~~~~g-~a~--Dl~~a~~~---------------~~~~~i~~~ 61 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQRG-IAREIVLEDIAKERVEA-EVL--DMQHGSSF---------------YPTVSIDGS 61 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-CCSEEEEECSSHHHHHH-HHH--HHHHTGGG---------------STTCEEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhcC-CCcEEEEEEeccccchh-HHH--HHHhcccc---------------CCCceeecC
Confidence 47899996 999999999998875 35678877765432211 111 22111111 122233322
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEE
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~v 160 (570)
+ +. +.+++.|+|+-+||..+- .+...+.+..|+.-.+.+....++. +.+.++.+
T Consensus 62 ~---------~~----~~~~daDvVVitaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~-~p~ai~iv 116 (143)
T d1llda1 62 D---------DP----EICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYML 116 (143)
T ss_dssp S---------CG----GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEE
T ss_pred C---------CH----HHhhCCcEEEEecccccCCCCchhhhhhhhHHHHHHHHHHHHhh-CCCeEEEE
Confidence 2 11 234679999999998653 3455567899999999998888876 44444433
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.04 E-value=0.0023 Score=54.79 Aligned_cols=35 Identities=23% Similarity=0.319 Sum_probs=26.9
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhC-CCccEEEEEEc
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQ-PNVKKLYLFVR 47 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~-~~V~~V~~lvR 47 (570)
.++|.|.||||++|+.|++-|.++. |.+ ++..+..
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~-~l~~~~s 37 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERDFPLH-RLHLLAS 37 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCS-CEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCce-EEEEEee
Confidence 4689999999999999999887654 554 5555543
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=95.82 E-value=0.0064 Score=52.06 Aligned_cols=37 Identities=14% Similarity=0.318 Sum_probs=27.9
Q ss_pred CEEEEECCcchhHHHHHHHHHHhC-CCccEEEEEEcCC
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQ-PNVKKLYLFVRAA 49 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~-~~V~~V~~lvR~~ 49 (570)
++|.|.||||++|+.|++.|+++. +.+..++.+..++
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~ 38 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ 38 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSC
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccc
Confidence 579999999999999999998642 2345666665443
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=95.69 E-value=0.037 Score=47.03 Aligned_cols=115 Identities=10% Similarity=0.083 Sum_probs=68.6
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|.|.|+ |.+|..++-.|+..+ -+.++++..+.+.....+ .+ ++..... +.........+
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~-~~~elvL~Di~~~~~~g~-~~--Dl~~a~~--------------~~~~~~~~~~~ 62 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQG-VADDYVFIDANEAKVKAD-QI--DFQDAMA--------------NLEAHGNIVIN 62 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHT-CCSEEEEECSSHHHHHHH-HH--HHHHHGG--------------GSSSCCEEEES
T ss_pred CeEEEECc-CHHHHHHHHHHHhcC-CCceEEEEecccchhhhH-HH--hhhcccc--------------ccCCccceecc
Confidence 78999995 999999999998876 346777776654321111 11 2211100 01123334444
Q ss_pred cCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cc----cHHHHHHHhHHHHHHHHHHHHHccCceEEEEEe
Q 008324 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DE----RYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~----~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vS 161 (570)
|.. .+++.|+|+-+||..+. .+ .-...++.|+.-.+.+.+..++. +.+.++.+-
T Consensus 63 d~~--------------~l~~adiVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~-~p~aivivv 121 (146)
T d1hyha1 63 DWA--------------ALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES-GFHGVLVVI 121 (146)
T ss_dssp CGG--------------GGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHT-TCCSEEEEC
T ss_pred CHH--------------HhccccEEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEe
Confidence 422 23789999999997542 11 11234678999999998888876 445554443
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.61 E-value=0.023 Score=48.75 Aligned_cols=111 Identities=14% Similarity=0.039 Sum_probs=63.5
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCC----CccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQP----NVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~----~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.++|.|+||+|.+|++++-.|+.... ....++++...+ .....+.+.-++... .....
T Consensus 3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~-~~~~~~~l~~~~~~~-----------------~~~~~ 64 (154)
T d5mdha1 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITP-MMGVLDGVLMELQDC-----------------ALPLL 64 (154)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGG-GHHHHHHHHHHHHHT-----------------CCTTE
T ss_pred ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCcc-chhhhhhhhhhhccc-----------------ccccc
Confidence 46899999999999999998875321 122333333322 222222221111000 01222
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHc
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~ 151 (570)
..+.+- .. ..+.++++|+|+-+|+..+- .++....++.|..-.+.+.+...+.
T Consensus 65 ~~~~~~---------~~--~~~~~~~~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~ 118 (154)
T d5mdha1 65 KDVIAT---------DK--EEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY 118 (154)
T ss_dssp EEEEEE---------SC--HHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH
T ss_pred cccccC---------cc--cccccCCceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhh
Confidence 222221 11 12556899999999987643 2344456899999999998887664
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.41 E-value=0.11 Score=43.63 Aligned_cols=115 Identities=15% Similarity=0.046 Sum_probs=70.3
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe-
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP- 91 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~- 91 (570)
|+|.|.|| |.+|..++-.|+..+ .+.++.++.+.+...... .+ ++-.... +.........
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~-~~~elvL~Di~~~~~~g~-al--Dl~~~~~--------------~~~~~~~i~~~ 61 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNL-DVDEIALVDIAEDLAVGE-AM--DLAHAAA--------------GIDKYPKIVGG 61 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHS-CCSEEEEECSSHHHHHHH-HH--HHHHHHH--------------TTTCCCEEEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhcC-cCceEEEEecccchhhHH-HH--HHhhhcc--------------ccCCCCccccC
Confidence 58999996 999999999888765 567888877654222111 11 1111000 0111222222
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCc-cccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEe
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f-~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vS 161 (570)
+|. +.+++.|+|+-.|+..+- .......+..|..-.+.+.+..++. +.+.++.+-
T Consensus 62 ~d~--------------~~~~~adiVvitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~-~p~aivivv 117 (142)
T d1ojua1 62 ADY--------------SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVV 117 (142)
T ss_dssp SCG--------------GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEEC
T ss_pred CCH--------------HHhccccEEEEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhh-CCCcEEEEe
Confidence 231 234789999999986543 3445566888999999999988886 444554444
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=95.36 E-value=0.08 Score=45.58 Aligned_cols=117 Identities=17% Similarity=0.109 Sum_probs=73.0
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.....++|.|.|+ |.+|..++-.|+..+ -+.++.++.+.+....++ . .++.....| .....
T Consensus 16 ~~~~~~KV~IIGa-G~VG~~~A~~l~~~~-l~~ElvLiD~~~~~a~g~-a--lDl~h~~~~--------------~~~~~ 76 (160)
T d1i0za1 16 ATVPNNKITVVGV-GQVGMACAISILGKS-LADELALVDVLEDKLKGE-M--MDLQHGSLF--------------LQTPK 76 (160)
T ss_dssp CCCCSSEEEEECC-SHHHHHHHHHHHHTT-CCSEEEEECSCHHHHHHH-H--HHHHHTGGG--------------CCCSE
T ss_pred ccCCCCeEEEECC-CHHHHHHHHHHHhcC-CCcEEEEEEeccchhHHH-H--HHHhccccc--------------cCCCe
Confidence 3455689999996 999999999998876 346778777654322111 1 122221111 11222
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc-ccHHHHHHHhHHHHHHHHHHHHHccCceEEE
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~-~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V 158 (570)
..-.+|. +.+.+.|+|+.+|+..+-. ++....++.|+.-.+.++...++. +.+.++
T Consensus 77 ~~~~~d~--------------~~~~~adiVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~-~p~aii 133 (160)
T d1i0za1 77 IVADKDY--------------SVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKY-SPDCII 133 (160)
T ss_dssp EEECSSG--------------GGGTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEE
T ss_pred EEeccch--------------hhcccccEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhc-CCCcEE
Confidence 2233332 2246899999999976432 334456788999999999888886 444443
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=95.35 E-value=0.085 Score=44.39 Aligned_cols=114 Identities=10% Similarity=0.103 Sum_probs=66.0
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEE-e
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV-P 91 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v-~ 91 (570)
++|.|.|+ |.+|..++-.|+..+ +..+.++...+...... .+ ++.....+. .....+. .
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~--l~dl~l~D~~~~~~~~~-~~--Dl~~~~~~~--------------~~~~~i~~~ 61 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKE--LGDIVLLDIVEGVPQGK-AL--DLYEASPIE--------------GFDVRVTGT 61 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHT--CSEEEEECSSSSHHHHH-HH--HHHTTHHHH--------------TCCCCEEEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhCC--cceEEEEeeccccchhH-HH--Hhhcccccc--------------CCCCEEEec
Confidence 58999996 999999999888764 35777776655432221 11 222211110 1122222 2
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCC-ccccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEe
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~-f~~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vS 161 (570)
+|. ..+++.|+|+-+||..+ ........+..|+.-.+.+++...+. +.+.++.+-
T Consensus 62 ~d~--------------~~~~~advvvitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~-~p~aivivv 117 (142)
T d1uxja1 62 NNY--------------ADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPL-SPNAVIIMV 117 (142)
T ss_dssp SCG--------------GGGTTCSEEEECCSCC---------CHHHHHHHHHHHHHHHGGG-CTTCEEEEC
T ss_pred CcH--------------HHhcCCCEEEEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhcc-CCCceEEEe
Confidence 232 22368999999999754 23344455788999999998888875 445555443
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=95.32 E-value=0.015 Score=51.37 Aligned_cols=38 Identities=21% Similarity=0.100 Sum_probs=32.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~ 50 (570)
-+|.+|+|+||+|-+|...+.-....| .+|+..+|++.
T Consensus 28 ~~G~~VlV~ga~ggvG~~aiqlak~~G---a~vi~~~~~~~ 65 (182)
T d1v3va2 28 KGGETVLVSAAAGAVGSVVGQIAKLKG---CKVVGAAGSDE 65 (182)
T ss_dssp CSSCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSHH
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHccC---CEEEEeCCCHH
Confidence 358999999999999999998777777 68899988753
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.15 E-value=0.0088 Score=52.53 Aligned_cols=34 Identities=15% Similarity=0.178 Sum_probs=30.5
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
|+|.|+||+|.+|++|++.|++.| ++|.+..|++
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G---~~V~l~~R~~ 34 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLG---HEIVVGSRRE 34 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT---CEEEEEESSH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCC---CEEEEEECCH
Confidence 589999999999999999999999 6778888865
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=95.12 E-value=0.018 Score=50.25 Aligned_cols=39 Identities=8% Similarity=0.127 Sum_probs=32.1
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCc
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~ 51 (570)
-+|.+|+|+||+|-+|...+.-....| .+|++.++++..
T Consensus 26 ~~g~~VlI~ga~G~vG~~aiqlak~~G---~~vi~~~~~~~~ 64 (171)
T d1iz0a2 26 RPGEKVLVQAAAGALGTAAVQVARAMG---LRVLAAASRPEK 64 (171)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTT---CEEEEEESSGGG
T ss_pred CCCCEEEEEeccccchhhhhhhhcccc---cccccccccccc
Confidence 468899999999999999988777777 578888887543
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=95.11 E-value=0.13 Score=43.73 Aligned_cols=116 Identities=16% Similarity=0.210 Sum_probs=69.9
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEe
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
..+|.|.|+ |.+|+.++..|+..+ +.++.++.+.+...... .+ ++.....| ...+.....
T Consensus 3 ~~KI~IIGa-G~VG~~~a~~l~~~~--l~el~L~Di~~~~~~g~-a~--Dl~~~~~~--------------~~~~~~v~~ 62 (150)
T d1t2da1 3 KAKIVLVGS-GMIGGVMATLIVQKN--LGDVVLFDIVKNMPHGK-AL--DTSHTNVM--------------AYSNCKVSG 62 (150)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTT--CCEEEEECSSSSHHHHH-HH--HHHTHHHH--------------HTCCCCEEE
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCC--CCeEEEEeccCCcceee-ec--chhhhccc--------------cCCCcEEEe
Confidence 358999995 999999997666654 57888887765432221 11 22222111 012222322
Q ss_pred ccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc------ccHHHHHHHhHHHHHHHHHHHHHccCceEEEEEe
Q 008324 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD------ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~------~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V~vS 161 (570)
.+ +. +.+.+.|+|+-+|+..+.. ..-...+..|+.-.+.+.+..++. +.+.++.+-
T Consensus 63 ~~---------~~----~~~~~advvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~-~p~aivivv 124 (150)
T d1t2da1 63 SN---------TY----DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKN-CPNAFIIVV 124 (150)
T ss_dssp EC---------CG----GGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEEC
T ss_pred cc---------cc----cccCCCcEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhc-CCCeEEEEe
Confidence 22 11 2336899999999965431 113445889999999999988886 445555443
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=94.87 E-value=0.025 Score=48.84 Aligned_cols=38 Identities=24% Similarity=0.385 Sum_probs=32.7
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~ 50 (570)
+++++|+|.|+ |-+|+.+++.|...+. .+|++..|+..
T Consensus 22 l~~~~ilviGa-G~~g~~v~~~L~~~g~--~~i~v~nRt~~ 59 (159)
T d1gpja2 22 LHDKTVLVVGA-GEMGKTVAKSLVDRGV--RAVLVANRTYE 59 (159)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCC--SEEEEECSSHH
T ss_pred cccCeEEEECC-CHHHHHHHHHHHhcCC--cEEEEEcCcHH
Confidence 67999999997 9999999999999874 67888888743
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=94.85 E-value=0.012 Score=44.34 Aligned_cols=40 Identities=13% Similarity=0.206 Sum_probs=33.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcc
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~ 52 (570)
-+|.+|+|+||+|-+|...+.-+...| .+|++..+++++.
T Consensus 30 ~~~~~vlI~gasGgVG~~aiQlak~~G---~~Vi~~t~s~~k~ 69 (77)
T d1o8ca2 30 PQDGEIVVTGASGGVGSTAVALLHKLG---YQVVAVSGRESTH 69 (77)
T ss_dssp GGGCEEEESSTTSHHHHHHHHHHHHTT---CCEEEEESCGGGH
T ss_pred cCCCcEEEEeCCCcHHHHHHHHHHHcC---CeEEEEECCHHHH
Confidence 457899999999999999998777777 5778888876554
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.82 E-value=0.024 Score=49.50 Aligned_cols=36 Identities=17% Similarity=0.117 Sum_probs=30.5
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
+|.+|||+||+|-+|...+.-....| .+|+++++++
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G---~~vi~~~~~~ 63 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAYG---LKILGTAGTE 63 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred CCCEEEEEeccccccccccccccccC---cccccccccc
Confidence 68899999999999999888777777 5788888764
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=94.74 E-value=0.015 Score=51.35 Aligned_cols=39 Identities=21% Similarity=0.204 Sum_probs=32.4
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcc
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~ 52 (570)
+|.+|||+||+|-+|...+.-....| .+|+..++++++.
T Consensus 31 ~g~~VLI~gaaGGVG~~aiQlak~~G---a~Viat~~s~~k~ 69 (176)
T d1xa0a2 31 ERGPVLVTGATGGVGSLAVSMLAKRG---YTVEASTGKAAEH 69 (176)
T ss_dssp GGCCEEESSTTSHHHHHHHHHHHHTT---CCEEEEESCTTCH
T ss_pred CCCEEEEEeccchHHHHHHHHHHHcC---CceEEecCchHHH
Confidence 36789999999999999998777777 6778888877654
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=94.24 E-value=0.014 Score=51.01 Aligned_cols=39 Identities=15% Similarity=0.208 Sum_probs=32.5
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCccc
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS 53 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~ 53 (570)
|.+|||+||+|-+|...+.-....| .+|+..+|++.+..
T Consensus 24 ~~~VLV~gaaGgVG~~avQlAk~~G---a~Viat~~s~~k~~ 62 (167)
T d1tt7a2 24 KGSVLVTGATGGVGGIAVSMLNKRG---YDVVASTGNREAAD 62 (167)
T ss_dssp GCCEEEESTTSHHHHHHHHHHHHHT---CCEEEEESSSSTHH
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcC---CceEEEecCHHHHH
Confidence 5689999999999999997777777 67899999876543
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.14 E-value=0.031 Score=48.95 Aligned_cols=36 Identities=14% Similarity=0.220 Sum_probs=30.7
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
+|.+|||+||+|-+|...+.-+...| .+|++.++++
T Consensus 25 ~g~~VlI~ga~g~vG~~~iqla~~~g---~~vi~~~~~~ 60 (183)
T d1pqwa_ 25 PGERVLIHSATGGVGMAAVSIAKMIG---ARIYTTAGSD 60 (183)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHT---CEEEEEESSH
T ss_pred CCCEEEEECCCCCcccccchhhcccc---ccceeeeccc
Confidence 47899999999999999998888777 5778888764
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=94.06 E-value=0.029 Score=49.28 Aligned_cols=41 Identities=20% Similarity=0.253 Sum_probs=32.0
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccH
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA 54 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~ 54 (570)
.+|.|.||||++|+.|++-|.+ .|++.-+++..|+..++..
T Consensus 2 ikVaIvGATGyvG~eLirlL~~-HP~~ei~~l~s~~~aG~~i 42 (176)
T d1vkna1 2 IRAGIIGATGYTGLELVRLLKN-HPEAKITYLSSRTYAGKKL 42 (176)
T ss_dssp EEEEEESTTSHHHHHHHHHHHH-CTTEEEEEEECSTTTTSBH
T ss_pred eEEEEECCCcHHHHHHHHHHHh-CCCceEEEeeccccCCCcc
Confidence 4899999999999999997765 6888766666666665543
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=93.98 E-value=0.059 Score=46.90 Aligned_cols=38 Identities=18% Similarity=0.100 Sum_probs=32.5
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCc
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~ 51 (570)
.|.+|+|+||+|-+|..++.-....| .+|++.++++..
T Consensus 28 ~g~~Vlv~ga~g~vG~~~iqlak~~G---a~Vi~~~~s~~k 65 (179)
T d1qora2 28 PDEQFLFHAAAGGVGLIACQWAKALG---AKLIGTVGTAQK 65 (179)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHT---CEEEEEESSHHH
T ss_pred CCCEEEEEccccccchHHHHHHHHhC---CeEeecccchHH
Confidence 47899999999999999998888888 678898887643
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=93.97 E-value=0.023 Score=47.16 Aligned_cols=71 Identities=13% Similarity=0.144 Sum_probs=46.0
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|++.|.|+ |-+|+.+++.|.+.|. .|+++..++ ++++ +++ ......+.|
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~---~vvvid~d~------~~~~----------~~~-----------~~~~~~~~g 49 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGH---EVLAVDINE------EKVN----------AYA-----------SYATHAVIA 49 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTC---CCEEEESCH------HHHH----------HTT-----------TTCSEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCC---eEEEecCcH------HHHH----------HHH-----------HhCCcceee
Confidence 57888876 9999999999999994 445555533 1211 111 133457789
Q ss_pred cCCCCCCCCCchhhHHHH-hCCccEEEEcC
Q 008324 93 DISSEDLGLKDSNLKEEL-WNELDIMVNSA 121 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l-~~~vdiViH~A 121 (570)
|.++ ++.++.+ ++++|.||-+.
T Consensus 50 d~~~-------~~~l~~a~i~~a~~vi~~~ 72 (134)
T d2hmva1 50 NATE-------ENELLSLGIRNFEYVIVAI 72 (134)
T ss_dssp CTTC-------TTHHHHHTGGGCSEEEECC
T ss_pred eccc-------chhhhccCCccccEEEEEc
Confidence 9994 4444443 57788887543
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=93.84 E-value=0.015 Score=50.10 Aligned_cols=35 Identities=23% Similarity=0.307 Sum_probs=25.5
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEE
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV 46 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lv 46 (570)
|=+|.|.||||++|..|++-|.++...+..+..+.
T Consensus 1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~ 35 (154)
T d2gz1a1 1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA 35 (154)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEec
Confidence 34799999999999999987765431345565554
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=93.74 E-value=0.035 Score=48.81 Aligned_cols=36 Identities=22% Similarity=0.403 Sum_probs=28.9
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
.+|.|.|||||+|+.|++-|.. .|++.-.++..++.
T Consensus 2 ikVaIiGATGyvG~eLlrlL~~-HP~~ei~~l~~~s~ 37 (179)
T d2g17a1 2 LNTLIVGASGYAGAELVSYVNR-HPHMTITALTVSAQ 37 (179)
T ss_dssp EEEEEETTTSHHHHHHHHHHHH-CTTEEEEEEEEETT
T ss_pred cEEEEECcccHHHHHHHHHHHh-CCCCceEeeEeecc
Confidence 5899999999999999997776 57876566666654
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=93.62 E-value=0.058 Score=41.81 Aligned_cols=36 Identities=11% Similarity=0.212 Sum_probs=29.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
|+||+|+|.|. |--|..+++.|.+.|. +|++.....
T Consensus 3 ~~~K~v~ViGl-G~sG~s~a~~L~~~g~---~v~~~D~~~ 38 (93)
T d2jfga1 3 YQGKNVVIIGL-GLTGLSCVDFFLARGV---TPRVMDTRM 38 (93)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHHTTC---CCEEEESSS
T ss_pred cCCCEEEEEeE-CHHHHHHHHHHHHCCC---EEEEeeCCc
Confidence 78999999997 6689999999999984 456665543
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=93.57 E-value=0.031 Score=49.45 Aligned_cols=40 Identities=13% Similarity=0.244 Sum_probs=30.9
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCccc
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS 53 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~ 53 (570)
.+|.|.||||++|+.|++-|.+ .|.+.-+++..++..++.
T Consensus 6 ikVaIlGATGyvG~elirLL~~-HP~~ei~~l~S~~~aG~~ 45 (183)
T d2cvoa1 6 VRIAVLGASGYTGAEIVRLLAN-HPQFRIKVMTADRKAGEQ 45 (183)
T ss_dssp EEEEEESCSSHHHHHHHHHHTT-CSSEEEEEEECSTTTTSC
T ss_pred cEEEEECcccHHHHHHHHHHHh-CCCceEEEEeccccCCCc
Confidence 3799999999999999998887 488765555555555554
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.90 E-value=0.1 Score=44.75 Aligned_cols=115 Identities=16% Similarity=0.050 Sum_probs=67.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.+..+|.|.|+ |.+|..++..|+..+ -+.+++++.+.+....+ +. .++.....| .......
T Consensus 17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~-l~~elvL~D~~~~~a~g-~a--lDl~~~~~~--------------~~~~~~~ 77 (159)
T d2ldxa1 17 LSRCKITVVGV-GDVGMACAISILLKG-LADELALVDADTDKLRG-EA--LDLQHGSLF--------------LSTPKIV 77 (159)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHTTT-SCSEEEEECSCHHHHHH-HH--HHHHHTTTT--------------CSCCEEE
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCchhhhc-cH--HHHhCcchh--------------cCCCeEE
Confidence 34458999996 999999999888765 34678887665422111 11 122111111 1122222
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCccCCcc-ccHHHHHHHhHHHHHHHHHHHHHccCceEEE
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA~v~f~-~~~~~~~~~Nv~gt~~ll~la~~~~~l~~~V 158 (570)
..+|. +.+.+.|+|+-+|+..+-. +.-...++.|+.-.+.+....++. +.+.++
T Consensus 78 ~~~d~--------------~~~~~adivvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~-~p~~iv 132 (159)
T d2ldxa1 78 FGKDY--------------NVSANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQN-SPDCKI 132 (159)
T ss_dssp EESSG--------------GGGTTEEEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHH-STTCEE
T ss_pred eccch--------------hhhccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhcc-CCCeEE
Confidence 22332 2236899999999875432 223344788999998888877765 444443
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=92.01 E-value=0.36 Score=40.76 Aligned_cols=38 Identities=18% Similarity=0.276 Sum_probs=30.2
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~ 50 (570)
.|+|.|.|+||-||+..++-+.+ .|+-.+|++++=.+.
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~-~~d~f~v~~lsa~~N 39 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIER-NLDRYQVIALTANRN 39 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHH-TGGGEEEEEEEESSC
T ss_pred CcEEEEECCCcHHHHHHHHHHHc-CCCCcEEEEEEeCCC
Confidence 58999999999999998887755 566568888876554
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=91.94 E-value=0.13 Score=44.86 Aligned_cols=38 Identities=11% Similarity=0.234 Sum_probs=29.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~ 50 (570)
-+|.+|+|+|| |-+|...+.-+...|. .+|++..+++.
T Consensus 27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga--~~Vi~~~~~~~ 64 (182)
T d1vj0a2 27 FAGKTVVIQGA-GPLGLFGVVIARSLGA--ENVIVIAGSPN 64 (182)
T ss_dssp CBTCEEEEECC-SHHHHHHHHHHHHTTB--SEEEEEESCHH
T ss_pred CCCCEEEEECC-Cccchhheeccccccc--ccccccccccc
Confidence 45899999997 8899988887777764 57888877543
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.58 E-value=0.3 Score=41.76 Aligned_cols=40 Identities=13% Similarity=0.107 Sum_probs=30.8
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcc
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~ 52 (570)
.-.|.+|+|.|+ |-+|...+.-+...| .+|+++.+++...
T Consensus 25 ~~~g~~vlI~Ga-G~vG~~a~q~ak~~G---~~vi~~~~~~~k~ 64 (168)
T d1piwa2 25 CGPGKKVGIVGL-GGIGSMGTLISKAMG---AETYVISRSSRKR 64 (168)
T ss_dssp CSTTCEEEEECC-SHHHHHHHHHHHHHT---CEEEEEESSSTTH
T ss_pred cCCCCEEEEECC-CCcchhHHHHhhhcc---ccccccccchhHH
Confidence 346899999996 899998887666667 4788888876543
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=91.51 E-value=0.26 Score=42.11 Aligned_cols=37 Identities=19% Similarity=0.153 Sum_probs=29.9
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
.|.+|+|.||+|-+|...+..+...+. .+|++..+++
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~--~~V~~~~~~~ 63 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAKAVSG--ATIIGVDVRE 63 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTC--CEEEEEESSH
T ss_pred CCCEEEEEeccccceeeeeeccccccc--ccccccccch
Confidence 578999999999999988888777764 5677777654
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=90.59 E-value=0.32 Score=40.81 Aligned_cols=74 Identities=12% Similarity=0.236 Sum_probs=48.8
Q ss_pred EEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEecc
Q 008324 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
+|+|.|. |=+|+.+++.|.+.+ ..|+++...+.. ..++... . ...++.++.||
T Consensus 5 HiII~G~-g~~g~~l~~~L~~~~---~~v~vId~d~~~--~~~~~~~-------------~--------~~~~~~vi~Gd 57 (153)
T d1id1a_ 5 HFIVCGH-SILAINTILQLNQRG---QNVTVISNLPED--DIKQLEQ-------------R--------LGDNADVIPGD 57 (153)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTT---CCEEEEECCCHH--HHHHHHH-------------H--------HCTTCEEEESC
T ss_pred EEEEECC-CHHHHHHHHHHHHcC---CCEEEEeccchh--HHHHHHH-------------h--------hcCCcEEEEcc
Confidence 5889986 889999999999988 455666654422 1111110 0 13578899999
Q ss_pred CCCCCCCCCchhhHH-HHhCCccEEEEcC
Q 008324 94 ISSEDLGLKDSNLKE-ELWNELDIMVNSA 121 (570)
Q Consensus 94 l~~~~lgls~~~~~~-~l~~~vdiViH~A 121 (570)
.+ +++.++ .-+++++.|+-+.
T Consensus 58 ~~-------d~~~L~~a~i~~a~~vi~~~ 79 (153)
T d1id1a_ 58 SN-------DSSVLKKAGIDRCRAILALS 79 (153)
T ss_dssp TT-------SHHHHHHHTTTTCSEEEECS
T ss_pred Cc-------chHHHHHhccccCCEEEEcc
Confidence 99 455443 3456789988654
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=90.41 E-value=0.45 Score=37.74 Aligned_cols=35 Identities=23% Similarity=0.278 Sum_probs=29.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~ 48 (570)
++||+|+|.| +|-+|..-++.|++.| .+|.+....
T Consensus 10 l~~k~vlVvG-~G~va~~ka~~ll~~g---a~v~v~~~~ 44 (113)
T d1pjqa1 10 LRDRDCLIVG-GGDVAERKARLLLEAG---ARLTVNALT 44 (113)
T ss_dssp CBTCEEEEEC-CSHHHHHHHHHHHHTT---BEEEEEESS
T ss_pred eCCCEEEEEC-CCHHHHHHHHHHHHCC---CeEEEEecc
Confidence 6799999999 5889999999999998 556665543
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=90.41 E-value=0.15 Score=43.37 Aligned_cols=36 Identities=14% Similarity=0.280 Sum_probs=31.4
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcc
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~ 52 (570)
|+|.|.|+ |-+|..+...|.+.| +.|.++.|.+...
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G---~~V~~~~r~~~~~ 36 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQG---HEVQGWLRVPQPY 36 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSSCCSE
T ss_pred CEEEEECc-CHHHHHHHHHHHHCC---CceEEEEcCHHHh
Confidence 68999997 999999999999999 6788999987543
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=90.17 E-value=0.42 Score=40.71 Aligned_cols=37 Identities=19% Similarity=0.118 Sum_probs=28.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~ 50 (570)
-.|.+|+|+| +|-+|...+.-+...| .+|+++.+++.
T Consensus 25 ~~g~~vlV~G-~G~vG~~~~~~ak~~G---a~vi~v~~~~~ 61 (170)
T d1e3ja2 25 QLGTTVLVIG-AGPIGLVSVLAAKAYG---AFVVCTARSPR 61 (170)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESCHH
T ss_pred CCCCEEEEEc-ccccchhhHhhHhhhc---ccccccchHHH
Confidence 4588999997 6889999887776666 57888877653
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=90.04 E-value=0.2 Score=43.17 Aligned_cols=34 Identities=21% Similarity=0.190 Sum_probs=29.9
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
.|+|.|.|| |-+|..++..|.+.| +.|++..|++
T Consensus 1 sk~iaIiGa-G~~G~~~A~~l~~~G---~~V~~~~r~~ 34 (184)
T d1bg6a2 1 SKTYAVLGL-GNGGHAFAAYLALKG---QSVLAWDIDA 34 (184)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSCH
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCC---CEEEEEECCH
Confidence 489999996 999999999999999 6788888864
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=90.04 E-value=0.22 Score=43.00 Aligned_cols=37 Identities=24% Similarity=0.332 Sum_probs=31.0
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~ 50 (570)
.+||+|+|.|+ |-.|++++..|.+.+ .+|+++.|+.+
T Consensus 16 ~~~k~vlIlGa-GGaarai~~aL~~~~---~~i~I~nR~~~ 52 (171)
T d1p77a1 16 RPNQHVLILGA-GGATKGVLLPLLQAQ---QNIVLANRTFS 52 (171)
T ss_dssp CTTCEEEEECC-SHHHHTTHHHHHHTT---CEEEEEESSHH
T ss_pred CCCCEEEEECC-cHHHHHHHHHHcccC---ceeeeccchHH
Confidence 57899999996 667999999998754 78999999863
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=89.83 E-value=0.19 Score=43.31 Aligned_cols=38 Identities=16% Similarity=0.173 Sum_probs=31.7
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCc
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~ 51 (570)
.+||+|+|.|| |-.+++++..|.+.+ .+|+++.|++..
T Consensus 16 ~~~k~vlIlGa-GGaarai~~al~~~g---~~i~I~nRt~~k 53 (170)
T d1nyta1 16 RPGLRILLIGA-GGASRGVLLPLLSLD---CAVTITNRTVSR 53 (170)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSSHHH
T ss_pred CCCCEEEEECC-cHHHHHHHHHhcccc---eEEEeccchHHH
Confidence 57899999996 668999999999987 368999897643
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=89.75 E-value=0.39 Score=40.95 Aligned_cols=38 Identities=16% Similarity=0.141 Sum_probs=27.7
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCc
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~ 51 (570)
-.|.+|+|.|+ |-+|...+.-+...| .++++..++...
T Consensus 29 ~~G~~VlI~Ga-G~vG~~a~qlak~~G---a~~i~~~~~~~~ 66 (168)
T d1uufa2 29 GPGKKVGVVGI-GGLGHMGIKLAHAMG---AHVVAFTTSEAK 66 (168)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESSGGG
T ss_pred CCCCEEEEecc-chHHHHHHHHhhccc---ccchhhccchhH
Confidence 45889999986 889998887666666 355667765543
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=89.36 E-value=0.26 Score=43.19 Aligned_cols=40 Identities=15% Similarity=-0.021 Sum_probs=31.2
Q ss_pred cCCCEEEE-ECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcc
Q 008324 10 LENKTILV-SGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (570)
Q Consensus 10 ~~~k~VlI-TGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~ 52 (570)
-.|.+|+| +||+|-+|...+.-....| .+|++.+|++.+.
T Consensus 27 ~~g~~vli~~ga~g~vG~~aiqlAk~~G---a~vI~~v~~~~~~ 67 (189)
T d1gu7a2 27 TPGKDWFIQNGGTSAVGKYASQIGKLLN---FNSISVIRDRPNL 67 (189)
T ss_dssp CTTTCEEEESCTTSHHHHHHHHHHHHHT---CEEEEEECCCTTH
T ss_pred CCCCEEEEEeCCCchHHHHHHHHHhhcC---CeEEEEEeccccc
Confidence 35677777 6999999999988777777 6788888876553
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=89.27 E-value=0.89 Score=41.23 Aligned_cols=97 Identities=21% Similarity=0.166 Sum_probs=57.5
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHH--hh-hhhHHHHHhhhcccc
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEV--LA-KDVFNVLKEKWGTRL 79 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l--~~-~~~f~~l~~~~~~~~ 79 (570)
++-+++++|+|.|+ |-+|.+++..|.+.| |+++.++....=..+-..|.. +++ .+ ..+-++|++..|
T Consensus 25 Q~kL~~~~VliiG~-GglGs~va~~La~~G--vg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np--- 98 (247)
T d1jw9b_ 25 QEALKDSRVLIVGL-GGLGCAASQYLASAG--VGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINP--- 98 (247)
T ss_dssp HHHHHHCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT---
T ss_pred HHHHhCCCEEEECC-CHHHHHHHHHHHHcC--CCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhc---
Confidence 45678899999995 669999999999987 688888765432222111100 000 00 001133444443
Q ss_pred ccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcC
Q 008324 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSA 121 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~A 121 (570)
.-++..+...+. .... .......|+|+.+.
T Consensus 99 ----~~~i~~~~~~~~-------~~~~-~~~~~~~divid~~ 128 (247)
T d1jw9b_ 99 ----HIAITPVNALLD-------DAEL-AALIAEHDLVLDCT 128 (247)
T ss_dssp ----TSEEEEECSCCC-------HHHH-HHHHHTSSEEEECC
T ss_pred ----ccchhhhhhhhh-------hccc-cccccccceeeecc
Confidence 245666655555 3433 36667899999775
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=88.93 E-value=0.15 Score=44.45 Aligned_cols=38 Identities=13% Similarity=0.222 Sum_probs=31.8
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcc
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~ 52 (570)
+.+|||+||+|-+|...+.-....| .+|++.+|++++.
T Consensus 32 ~~~vlV~gasGGVG~~aiQlAk~~G---a~Via~~~~~~k~ 69 (177)
T d1o89a2 32 DGEIVVTGASGGVGSTAVALLHKLG---YQVVAVSGRESTH 69 (177)
T ss_dssp GCEEEESSTTSHHHHHHHHHHHHTT---CCEEEEESCGGGH
T ss_pred CCcEEEEEccccchHHHHHHHHHcC---CCeEEEecchhHH
Confidence 4589999999999999998877778 5778889977654
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=88.49 E-value=0.16 Score=42.72 Aligned_cols=36 Identities=14% Similarity=0.134 Sum_probs=30.5
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~ 50 (570)
-++|.|.||.|.+|..+++.|.+.|+ .|.+..|.+.
T Consensus 9 ~~kI~iIGg~G~mG~~la~~L~~~G~---~V~~~d~~~~ 44 (152)
T d2pv7a2 9 IHKIVIVGGYGKLGGLFARYLRASGY---PISILDREDW 44 (152)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTC---CEEEECTTCG
T ss_pred CCeEEEEcCCCHHHHHHHHHHHHcCC---CcEecccccc
Confidence 47999999999999999999999994 5567777654
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=87.82 E-value=0.99 Score=37.90 Aligned_cols=37 Identities=16% Similarity=0.305 Sum_probs=29.6
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~ 50 (570)
|+|.|.|+||-||+..++-+.+ .|+--+|++|.=.+.
T Consensus 2 K~I~IlGsTGSIG~~tL~Vi~~-~~d~f~v~~Lsa~~N 38 (151)
T d1q0qa2 2 KQLTILGSTGSIGCSTLDVVRH-NPEHFRVVALVAGKN 38 (151)
T ss_dssp EEEEEETTTSHHHHHHHHHHHH-CTTTEEEEEEEESSC
T ss_pred CeEEEEcCCcHHHHHHHHHHHh-CCCCcEEEEEEecCc
Confidence 6899999999999999887754 566568888875544
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=87.41 E-value=0.36 Score=42.07 Aligned_cols=34 Identities=15% Similarity=0.095 Sum_probs=25.4
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcC
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~ 48 (570)
.+|||+||+|-+|...+.-....|. ..|+..+++
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~Ga--~~vi~~~~~ 65 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLLGC--SRVVGICGT 65 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHTTC--SEEEEEESS
T ss_pred CEEEEECCCchhhHHHHHHHHHcCC--cceecccch
Confidence 7899999999999998877665663 345555543
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=87.24 E-value=1.2 Score=38.74 Aligned_cols=92 Identities=8% Similarity=0.064 Sum_probs=58.7
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
..|++|.|.| .|.||+.+++.+..-+ .+|+...+..+...... ....-++.+-+ ...+..
T Consensus 42 l~~~~vgiiG-~G~IG~~va~~l~~fg---~~v~~~d~~~~~~~~~~------~~~~~l~ell~----------~sDii~ 101 (188)
T d1sc6a1 42 ARGKKLGIIG-YGHIGTQLGILAESLG---MYVYFYDIENKLPLGNA------TQVQHLSDLLN----------MSDVVS 101 (188)
T ss_dssp STTCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSCCCCCTTC------EECSCHHHHHH----------HCSEEE
T ss_pred ccceEEEEee-cccchhhhhhhccccc---ceEeeccccccchhhhh------hhhhhHHHHHh----------hcccee
Confidence 5789999997 8999999999887766 56777776543221100 00000111111 256778
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCc
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAA 122 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA 122 (570)
+...++...-++=+++.+ ...++=.++||.|-
T Consensus 102 i~~plt~~T~~li~~~~l-~~mk~~a~lIN~aR 133 (188)
T d1sc6a1 102 LHVPENPSTKNMMGAKEI-SLMKPGSLLINASR 133 (188)
T ss_dssp ECCCSSTTTTTCBCHHHH-HHSCTTEEEEECSC
T ss_pred ecccCCcchhhhccHHHH-hhCCCCCEEEEcCc
Confidence 888888888888777776 44455667777763
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=87.03 E-value=0.62 Score=38.05 Aligned_cols=24 Identities=8% Similarity=0.044 Sum_probs=20.5
Q ss_pred CEEEEECCcchhHHHHHHHHHHhC
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQ 36 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~ 36 (570)
++|.|.|++|=+|+.+.+.+.+++
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~ 24 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKG 24 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT
T ss_pred CEEEEECCCCHHHHHHHHHHhcCC
Confidence 579999999999999887776655
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=86.96 E-value=0.45 Score=41.03 Aligned_cols=37 Identities=14% Similarity=0.062 Sum_probs=27.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-+|.+|+|.|+ |-+|...+.-+...|+ .+|++..+++
T Consensus 26 ~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga--~~Vi~~d~~~ 62 (174)
T d1jqba2 26 EMGSSVVVIGI-GAVGLMGIAGAKLRGA--GRIIGVGSRP 62 (174)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHTTTC--SCEEEECCCH
T ss_pred CCCCEEEEEcC-Ccchhhhhhhhhcccc--cccccccchh
Confidence 46889999986 8999887776666664 5677777654
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=86.93 E-value=0.96 Score=39.80 Aligned_cols=92 Identities=12% Similarity=0.148 Sum_probs=55.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
..||+|.|.| .|-||+.+++.|..-| .+|+...+..+..... +.....-++.+-+ ...+..
T Consensus 41 l~gk~vgIiG-~G~IG~~va~~l~~fg---~~V~~~d~~~~~~~~~-----~~~~~~~l~~~l~----------~sDii~ 101 (197)
T d1j4aa1 41 VRDQVVGVVG-TGHIGQVFMQIMEGFG---AKVITYDIFRNPELEK-----KGYYVDSLDDLYK----------QADVIS 101 (197)
T ss_dssp GGGSEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSCCHHHHH-----TTCBCSCHHHHHH----------HCSEEE
T ss_pred ccCCeEEEec-ccccchhHHHhHhhhc---ccccccCccccccccc-----ceeeecccccccc----------cccccc
Confidence 5689999998 8999999999997666 4666665544321110 0111111111111 146667
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcC
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSA 121 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~A 121 (570)
+...++...-++-+.+.+ ...++-.++||.|
T Consensus 102 ~~~plt~~T~~li~~~~l-~~mk~~a~lIN~s 132 (197)
T d1j4aa1 102 LHVPDVPANVHMINDESI-AKMKQDVVIVNVS 132 (197)
T ss_dssp ECSCCCGGGTTCBSHHHH-HHSCTTEEEEECS
T ss_pred ccCCccccccccccHHHH-hhhCCccEEEecC
Confidence 777777766666666655 4445557777775
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=86.50 E-value=0.43 Score=40.78 Aligned_cols=36 Identities=17% Similarity=0.261 Sum_probs=27.1
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
.+|.|.||+|=+|+.+++.+++. +++.-+.++.|+.
T Consensus 5 ikI~i~Ga~GrMG~~i~~~i~~~-~~~~lv~~~~~~~ 40 (162)
T d1diha1 5 IRVAIAGAGGRMGRQLIQAALAL-EGVQLGAALEREG 40 (162)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHS-TTEECCCEECCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEeccc
Confidence 48999999999999999999875 3444344555544
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=86.44 E-value=0.99 Score=38.54 Aligned_cols=37 Identities=8% Similarity=-0.031 Sum_probs=27.5
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-.|.+|+|.|+ |-+|...+.-+...+. ..|++..+++
T Consensus 27 ~~g~~VlI~G~-G~iG~~~~~~ak~~g~--~~v~~~~~~~ 63 (174)
T d1f8fa2 27 TPASSFVTWGA-GAVGLSALLAAKVCGA--SIIIAVDIVE 63 (174)
T ss_dssp CTTCEEEEESC-SHHHHHHHHHHHHHTC--SEEEEEESCH
T ss_pred CCCCEEEEeCC-CHHHhhhhhccccccc--ceeeeeccHH
Confidence 45789999997 8999998887777775 4556555543
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=86.27 E-value=0.82 Score=39.04 Aligned_cols=39 Identities=18% Similarity=0.058 Sum_probs=29.8
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcc
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~ 52 (570)
.|.+|+|.||+| +|...+..+...+. .+|++..++++..
T Consensus 28 ~GdtVlV~GaGG-~G~~~~~~~~~~g~--~~Vi~~~~~~~k~ 66 (176)
T d2jhfa2 28 QGSTCAVFGLGG-VGLSVIMGCKAAGA--ARIIGVDINKDKF 66 (176)
T ss_dssp TTCEEEEECCSH-HHHHHHHHHHHTTC--SEEEEECSCGGGH
T ss_pred CCCEEEEECCCC-cHHHHHHHHHHcCC--ceEEeecCcHHHH
Confidence 578999999955 88888888877664 6788888776543
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=86.19 E-value=1.3 Score=38.69 Aligned_cols=95 Identities=9% Similarity=0.055 Sum_probs=58.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
..||+|.|.| .|-||+.+++.|..-| -+|+...|........ .. .+....-++.+-+ ...+..
T Consensus 47 L~gktvgIiG-~G~IG~~va~~l~~fg---~~v~~~d~~~~~~~~~-~~--~~~~~~~l~~ll~----------~sD~i~ 109 (193)
T d1mx3a1 47 IRGETLGIIG-LGRVGQAVALRAKAFG---FNVLFYDPYLSDGVER-AL--GLQRVSTLQDLLF----------HSDCVT 109 (193)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHTTT---CEEEEECTTSCTTHHH-HH--TCEECSSHHHHHH----------HCSEEE
T ss_pred eeCceEEEec-cccccccceeeeeccc---cceeeccCcccccchh-hh--ccccccchhhccc----------cCCEEE
Confidence 6789999998 7999999999997665 4666666654432111 10 0000001111111 256777
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCc
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAA 122 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA 122 (570)
+...+++..-++-+.+.. ...++-.++||.|-
T Consensus 110 ~~~plt~~T~~li~~~~l-~~mk~~a~lIN~sR 141 (193)
T d1mx3a1 110 LHCGLNEHNHHLINDFTV-KQMRQGAFLVNTAR 141 (193)
T ss_dssp ECCCCCTTCTTSBSHHHH-TTSCTTEEEEECSC
T ss_pred EeecccccchhhhhHHHH-hccCCCCeEEecCC
Confidence 888888888888766665 44455567777763
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=85.78 E-value=0.31 Score=43.15 Aligned_cols=32 Identities=16% Similarity=0.119 Sum_probs=26.8
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcC
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~ 48 (570)
|+|.|.| .||+|..++..|++.| ++|++...+
T Consensus 1 MkI~ViG-lG~vGl~~a~~la~~g---~~V~g~D~n 32 (202)
T d1mv8a2 1 MRISIFG-LGYVGAVCAGCLSARG---HEVIGVDVS 32 (202)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTT---CEEEEECSC
T ss_pred CEEEEEC-CCHhHHHHHHHHHhCC---CcEEEEeCC
Confidence 5789996 8999999999999999 566777654
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=85.76 E-value=1.2 Score=38.53 Aligned_cols=87 Identities=15% Similarity=0.165 Sum_probs=53.7
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccH--HHHHHHHHhhhhhHHHHHhhhccccccccCCce
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA--ALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~--~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
+.||+|.|.| .|-||+.+++.+..-| .+|+...|.++.... ...++ +++ ....+
T Consensus 40 l~gk~vgIiG-~G~IG~~va~~l~~~g---~~v~~~d~~~~~~~~~~~~~l~-ell-------------------~~sDi 95 (181)
T d1qp8a1 40 IQGEKVAVLG-LGEIGTRVGKILAALG---AQVRGFSRTPKEGPWRFTNSLE-EAL-------------------REARA 95 (181)
T ss_dssp CTTCEEEEES-CSTHHHHHHHHHHHTT---CEEEEECSSCCCSSSCCBSCSH-HHH-------------------TTCSE
T ss_pred ccCceEEEec-cccccccceeeeeccc---cccccccccccccceeeeechh-hhh-------------------hccch
Confidence 6799999998 6889999999998777 577888776543210 00011 000 12455
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhCCccEEEEcC
Q 008324 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSA 121 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~A 121 (570)
..+..-+++...++=+.+.+ ...++-.++|++|
T Consensus 96 v~~~~pl~~~t~~li~~~~l-~~mk~~ailIN~~ 128 (181)
T d1qp8a1 96 AVCALPLNKHTRGLVKYQHL-ALMAEDAVFVNVG 128 (181)
T ss_dssp EEECCCCSTTTTTCBCHHHH-TTSCTTCEEEECS
T ss_pred hhccccccccccccccccee-eeccccceEEecc
Confidence 66666666666666555554 3334455666665
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.70 E-value=0.34 Score=48.31 Aligned_cols=97 Identities=13% Similarity=0.147 Sum_probs=58.8
Q ss_pred HHhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHH----HHHh---hhhhHHHHHhhhccc
Q 008324 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ----NEVL---AKDVFNVLKEKWGTR 78 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~----~~l~---~~~~f~~l~~~~~~~ 78 (570)
++.-+++.+|||.|+.| +|..++..|...| |+++.++....=..+-..|.. +++- .....+++++.+|.
T Consensus 31 ~~~~l~~~kVlvvG~Gg-lG~ei~k~L~~~G--vg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~- 106 (426)
T d1yovb1 31 LQFLLDTCKVLVIGAGG-LGCELLKNLALSG--FRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPN- 106 (426)
T ss_dssp HHHHHHHCCEEEECSST-THHHHHHHHHTTT--CCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTT-
T ss_pred HHHHHhcCeEEEECCCH-HHHHHHHHHHHcC--CCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCC-
Confidence 34456788999999855 9999999999877 577777665432222111100 0000 01122445544442
Q ss_pred cccccCCceEEEeccCCCCCCCCCchhhHHHHhCCccEEEEcC
Q 008324 79 LNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSA 121 (570)
Q Consensus 79 ~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiViH~A 121 (570)
-+|..+..++.+ .. ..++++.|+||.+.
T Consensus 107 ------v~i~~~~~~i~~-------~~--~~~~~~~DlVi~~~ 134 (426)
T d1yovb1 107 ------CNVVPHFNKIQD-------FN--DTFYRQFHIIVCGL 134 (426)
T ss_dssp ------CCCEEECSCGGG-------BC--HHHHTTCSEEEECC
T ss_pred ------CceEeeeccccc-------hH--HHHHHhcchheecc
Confidence 467778777763 22 25678999999764
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=85.36 E-value=0.55 Score=39.56 Aligned_cols=37 Identities=16% Similarity=0.264 Sum_probs=31.6
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
+||+|+|.| .|+.|-.++..|.+.++++ +|+++-+..
T Consensus 1 ~gkrivIvG-gG~~G~e~A~~l~~~~~~~-~Vtlie~~~ 37 (186)
T d1fcda1 1 AGRKVVVVG-GGTGGATAAKYIKLADPSI-EVTLIEPNT 37 (186)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHHCTTS-EEEEECSCS
T ss_pred CCCcEEEEC-ccHHHHHHHHHHHHcCCCC-cEEEEECCC
Confidence 589999999 5999999999999999875 677776654
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=84.92 E-value=1.2 Score=36.25 Aligned_cols=38 Identities=18% Similarity=0.197 Sum_probs=30.5
Q ss_pred HhhcCCCEEEEECCc---chhHHHHHHHHHHhCCCccEEEEEE
Q 008324 7 VEFLENKTILVSGVT---GFVAKVFIEKILRVQPNVKKLYLFV 46 (570)
Q Consensus 7 ~~~~~~k~VlITGaT---GFlG~~LvekLl~~~~~V~~V~~lv 46 (570)
..+|+.++|.|.||| |-.|..+++.|++.+ -++||.+-
T Consensus 3 ~~lf~PksIAVVGaS~~~~~~g~~v~~~L~~~~--~g~v~pVn 43 (129)
T d2csua1 3 DYFFNPKGIAVIGASNDPKKLGYEVFKNLKEYK--KGKVYPVN 43 (129)
T ss_dssp CTTTSCSEEEEETCCSCTTSHHHHHHHHHTTCC--SSEEEEEC
T ss_pred hHhCCCCeEEEEccCCCCCCcHHHHHHHHHHcC--CCcEEEec
Confidence 458999999999998 999999999987644 25777653
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=84.20 E-value=1.6 Score=37.86 Aligned_cols=96 Identities=11% Similarity=0.079 Sum_probs=60.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
..|++|.|.| .|-||+.++++|..-+ -+|+...|............ +....-++.+- -...+..
T Consensus 42 l~~~~vgiiG-~G~IG~~va~~l~~fg---~~v~~~d~~~~~~~~~~~~~--~~~~~~l~~~l----------~~sD~v~ 105 (188)
T d2naca1 42 LEAMHVGTVA-AGRIGLAVLRRLAPFD---VHLHYTDRHRLPESVEKELN--LTWHATREDMY----------PVCDVVT 105 (188)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHGGGT---CEEEEECSSCCCHHHHHHHT--CEECSSHHHHG----------GGCSEEE
T ss_pred ccccceeecc-ccccchhhhhhhhccC---ceEEEEeecccccccccccc--ccccCCHHHHH----------Hhccchh
Confidence 4689999998 7999999999998766 46777777654432221100 00000001000 1256778
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcCc
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAA 122 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~AA 122 (570)
+...+++..-++=+.+.. ...++-.++||+|-
T Consensus 106 ~~~plt~~T~~li~~~~l-~~mk~ga~lIN~aR 137 (188)
T d2naca1 106 LNCPLHPETEHMINDETL-KLFKRGAYIVNTAR 137 (188)
T ss_dssp ECSCCCTTTTTCBSHHHH-TTSCTTEEEEECSC
T ss_pred hcccccccchhhhHHHHH-HhCCCCCEEEecCc
Confidence 888888887777677665 44555568888763
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.10 E-value=1.3 Score=37.48 Aligned_cols=37 Identities=16% Similarity=0.146 Sum_probs=28.9
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
-.|.+|+|.|+ |-+|...+.-+...|. .+|++..+.+
T Consensus 25 ~~gd~VlI~G~-G~iG~~~~~~a~~~G~--~~Vi~~d~~~ 61 (171)
T d1pl8a2 25 TLGHKVLVCGA-GPIGMVTLLVAKAMGA--AQVVVTDLSA 61 (171)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEESCH
T ss_pred CCCCEEEEECC-CccHHHHHHHHHHcCC--ceEEeccCCH
Confidence 35789999986 9999988887777774 5788777654
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=84.02 E-value=0.75 Score=36.99 Aligned_cols=35 Identities=11% Similarity=0.184 Sum_probs=31.1
Q ss_pred CCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC
Q 008324 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~ 50 (570)
+++|+|.| .||+|-.+++.|.+.| .+|.++.|++.
T Consensus 30 ~~~vvIIG-gG~iG~E~A~~l~~~g---~~Vtli~~~~~ 64 (121)
T d1d7ya2 30 QSRLLIVG-GGVIGLELAATARTAG---VHVSLVETQPR 64 (121)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESSSS
T ss_pred CCeEEEEC-cchhHHHHHHHhhccc---ceEEEEeeccc
Confidence 68999998 6999999999999988 78889988774
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.35 E-value=1.4 Score=37.74 Aligned_cols=27 Identities=15% Similarity=0.254 Sum_probs=25.4
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQ 36 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~ 36 (570)
++||+|.|.|.+..+|+-|+..|++.+
T Consensus 37 l~Gk~vvVIGrS~iVGrPLa~lL~~~g 63 (170)
T d1a4ia1 37 IAGRHAVVVGRSKIVGAPMHDLLLWNN 63 (170)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTT
T ss_pred cccceEEEEecCCccchHHHHHHHhcc
Confidence 579999999999999999999999987
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.24 E-value=0.36 Score=49.51 Aligned_cols=40 Identities=8% Similarity=0.102 Sum_probs=31.4
Q ss_pred HhhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
++-+++.+|+|.|+ |-+|..+++.|...| |+++.++....
T Consensus 20 Q~~L~~s~VlvvG~-gglG~Ei~knLvl~G--Vg~itivD~d~ 59 (529)
T d1yova1 20 QEALESAHVCLINA-TATGTEILKNLVLPG--IGSFTIIDGNQ 59 (529)
T ss_dssp HHHHHHCEEEECCC-SHHHHHHHHHHHTTT--CSEEEEECCSB
T ss_pred HHHHhCCCEEEECC-CHHHHHHHHHHHHhc--CCEEEEEcCCc
Confidence 44567789999997 559999999999865 68888875443
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=82.92 E-value=0.68 Score=39.25 Aligned_cols=36 Identities=19% Similarity=0.289 Sum_probs=26.7
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEE-cCCC
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV-RAAD 50 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lv-R~~~ 50 (570)
.+|.|.| ||.+|+.++.++++..|.+ ++++++ |+..
T Consensus 5 irvaIIG-aG~ig~~~~~~~l~~~~~~-el~avas~~~~ 41 (157)
T d1nvmb1 5 LKVAIIG-SGNIGTDLMIKVLRNAKYL-EMGAMVGIDAA 41 (157)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHHHCSSE-EEEEEECSCTT
T ss_pred cEEEEEc-CcHHHHHHHHHHHhhCCcc-eEEEEEecchh
Confidence 4899999 8999998777788877765 555554 5443
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=82.73 E-value=1.7 Score=38.17 Aligned_cols=91 Identities=15% Similarity=0.102 Sum_probs=54.8
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+.||+|.|.| .|-||+.+++.|..-| -+|++..|........ -....-++.+-+ ...+..
T Consensus 43 l~~ktvgIiG-~G~IG~~va~~l~~fg---~~v~~~d~~~~~~~~~------~~~~~~l~~l~~----------~~D~v~ 102 (199)
T d1dxya1 43 LGQQTVGVMG-TGHIGQVAIKLFKGFG---AKVIAYDPYPMKGDHP------DFDYVSLEDLFK----------QSDVID 102 (199)
T ss_dssp GGGSEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSCCSSCCT------TCEECCHHHHHH----------HCSEEE
T ss_pred ccceeeeeee-cccccccccccccccc---eeeeccCCccchhhhc------chhHHHHHHHHH----------hcccce
Confidence 5689999998 7999999999998766 5677776654321100 000000111111 145666
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcC
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSA 121 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~A 121 (570)
+..-+++..-++-+.+.. ...++-.++||.|
T Consensus 103 ~~~plt~~T~~li~~~~l-~~mk~~a~lIN~a 133 (199)
T d1dxya1 103 LHVPGIEQNTHIINEAAF-NLMKPGAIVINTA 133 (199)
T ss_dssp ECCCCCGGGTTSBCHHHH-HHSCTTEEEEECS
T ss_pred eeecccccccccccHHHh-hccCCceEEEecc
Confidence 777777666666666665 4445556777776
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=82.62 E-value=0.92 Score=38.72 Aligned_cols=27 Identities=15% Similarity=0.166 Sum_probs=25.2
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQ 36 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~ 36 (570)
+.||+|+|.|.+..+|+-|...|.+.+
T Consensus 35 l~GK~v~VIGrS~~VG~Pla~lL~~~g 61 (166)
T d1b0aa1 35 TFGLNAVVIGASNIVGRPMSMELLLAG 61 (166)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTTT
T ss_pred cccceEEEEeccccccHHHHHHHHHhh
Confidence 679999999999999999999998877
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=82.59 E-value=2.8 Score=35.69 Aligned_cols=40 Identities=15% Similarity=0.057 Sum_probs=30.6
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCc
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~ 51 (570)
.-.|.+|+|.|+ |-||...+.-+...|. .+|++..+++..
T Consensus 26 v~~G~~VlV~G~-G~iGl~a~~~ak~~Ga--~~Vi~~d~~~~r 65 (174)
T d1e3ia2 26 VTPGSTCAVFGL-GCVGLSAIIGCKIAGA--SRIIAIDINGEK 65 (174)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSCGGG
T ss_pred CCCCCEEEEECC-ChHHHHHHHHHHHhCC--ceeeeeccchHH
Confidence 346889999985 9999998888877774 567777776543
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=82.03 E-value=0.52 Score=39.40 Aligned_cols=35 Identities=31% Similarity=0.307 Sum_probs=29.6
Q ss_pred hcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEc
Q 008324 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR 47 (570)
.++||+|+|.|| |.+|..-++.|++.| .+|.++..
T Consensus 10 ~l~gkrvLViGg-G~va~~ka~~Ll~~G---A~VtVvap 44 (150)
T d1kyqa1 10 QLKDKRILLIGG-GEVGLTRLYKLMPTG---CKLTLVSP 44 (150)
T ss_dssp CCTTCEEEEEEE-SHHHHHHHHHHGGGT---CEEEEEEE
T ss_pred eeCCCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEeC
Confidence 378999999996 899999999999999 56666643
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=82.02 E-value=2.7 Score=36.48 Aligned_cols=95 Identities=16% Similarity=0.173 Sum_probs=56.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEE
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.+|++|.|.| .|-||+.+++.+..-| .+|+...+........... ......-++.+-+ ...+..
T Consensus 45 l~g~tvgIiG-~G~IG~~va~~l~~fg---~~v~~~d~~~~~~~~~~~~--~~~~~~~l~~ll~----------~sD~v~ 108 (191)
T d1gdha1 45 LDNKTLGIYG-FGSIGQALAKRAQGFD---MDIDYFDTHRASSSDEASY--QATFHDSLDSLLS----------VSQFFS 108 (191)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHTTT---CEEEEECSSCCCHHHHHHH--TCEECSSHHHHHH----------HCSEEE
T ss_pred ecccceEEee-cccchHHHHHHHHhhc---cccccccccccccchhhcc--cccccCCHHHHHh----------hCCeEE
Confidence 4689999998 7999999999887766 4566666554432221110 0000111111111 256677
Q ss_pred EeccCCCCCCCCCchhhHHHHhCCccEEEEcC
Q 008324 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSA 121 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiViH~A 121 (570)
+...++...-++=+.+.+ ...++-.++||.|
T Consensus 109 l~~plt~~T~~li~~~~l-~~mk~~a~lIN~s 139 (191)
T d1gdha1 109 LNAPSTPETRYFFNKATI-KSLPQGAIVVNTA 139 (191)
T ss_dssp ECCCCCTTTTTCBSHHHH-TTSCTTEEEEECS
T ss_pred ecCCCCchHhheecHHHh-hCcCCccEEEecC
Confidence 777787777677666655 4445556777776
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=81.96 E-value=2 Score=36.22 Aligned_cols=39 Identities=13% Similarity=-0.066 Sum_probs=28.3
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCc
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~ 51 (570)
=.|.+|+|.|++ .+|...+..+...|. ..|++..+++..
T Consensus 27 ~~G~tVlI~GaG-GvG~~aiq~ak~~G~--~~vi~~~~~~~k 65 (176)
T d2fzwa2 27 EPGSVCAVFGLG-GVGLAVIMGCKVAGA--SRIIGVDINKDK 65 (176)
T ss_dssp CTTCEEEEECCS-HHHHHHHHHHHHHTC--SEEEEECSCGGG
T ss_pred CCCCEEEEecch-hHHHHHHHHHHHHhc--CceEEEcccHHH
Confidence 357899999985 589888887777774 566666665443
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=81.74 E-value=0.88 Score=36.75 Aligned_cols=68 Identities=9% Similarity=0.186 Sum_probs=44.1
Q ss_pred CEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccCCceEEEec
Q 008324 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|.|+|.|. |=+|+.++++|.. ..|.++...+... +.+. ..++.++.|
T Consensus 1 kHivI~G~-g~~g~~l~~~L~~-----~~i~vi~~d~~~~---~~~~------------------------~~~~~~i~G 47 (129)
T d2fy8a1 1 RHVVICGW-SESTLECLRELRG-----SEVFVLAEDENVR---KKVL------------------------RSGANFVHG 47 (129)
T ss_dssp CCEEEESC-CHHHHHHHHTSCG-----GGEEEEESCTTHH---HHHH------------------------HTTCEEEES
T ss_pred CEEEEECC-CHHHHHHHHHHcC-----CCCEEEEcchHHH---HHHH------------------------hcCcccccc
Confidence 57899985 7789999999854 2355665544322 2211 156789999
Q ss_pred cCCCCCCCCCchhhHHH-HhCCccEEEEc
Q 008324 93 DISSEDLGLKDSNLKEE-LWNELDIMVNS 120 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~-l~~~vdiViH~ 120 (570)
|.+ +++.++. -+++++.|+-+
T Consensus 48 d~~-------~~~~L~~a~i~~A~~vi~~ 69 (129)
T d2fy8a1 48 DPT-------RVSDLEKANVRGARAVIVN 69 (129)
T ss_dssp CTT-------SHHHHHHTTCTTCSEEEEC
T ss_pred ccC-------CHHHHHHhhhhcCcEEEEe
Confidence 999 4454433 35678888854
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=81.32 E-value=0.42 Score=40.94 Aligned_cols=37 Identities=24% Similarity=0.394 Sum_probs=31.4
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~ 50 (570)
++++|+|.|+ |..|++++..|.+.|. .+|+++.|+++
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~~~g~--~~I~I~nR~~~ 52 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFKNSGF--EKLKIYARNVK 52 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTC--CCEEEECSCHH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCC--CEEEEecccHH
Confidence 6889999996 7799999999998774 67888888764
|
| >d1vdca2 c.3.1.5 (A:118-243) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=80.80 E-value=1.7 Score=35.28 Aligned_cols=40 Identities=23% Similarity=0.259 Sum_probs=29.8
Q ss_pred hhcCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCCc
Q 008324 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~~ 51 (570)
.||+||.|.|.|+ |--+-.=+..|.+-. ++|+++.|..+-
T Consensus 30 ~~frgk~V~VvGg-GdsA~e~A~~L~~~a---~~V~li~r~~~~ 69 (130)
T d1vdca2 30 PIFRNKPLAVIGG-GDSAMEEANFLTKYG---SKVYIIHRRDAF 69 (130)
T ss_dssp GGGTTSEEEEECC-SHHHHHHHHHHTTTS---SEEEEECSSSSC
T ss_pred HHhCCCEEEEEcC-chHHHHHHHHHhCCC---CcEEEEEecccc
Confidence 4999999999997 555555555565544 889999997653
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=80.55 E-value=1.2 Score=35.70 Aligned_cols=36 Identities=19% Similarity=0.301 Sum_probs=30.7
Q ss_pred CCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCCC
Q 008324 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~~ 50 (570)
++++|+|.| .||+|-.+++.|.+.| .+|.++-|...
T Consensus 29 ~~k~vvViG-gG~iG~E~A~~l~~~g---~~Vtlie~~~~ 64 (123)
T d1nhpa2 29 EVNNVVVIG-SGYIGIEAAEAFAKAG---KKVTVIDILDR 64 (123)
T ss_dssp TCCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESSSS
T ss_pred CCCEEEEEC-ChHHHHHHHHHhhccc---eEEEEEEecCc
Confidence 468999998 6999999999999998 67888878653
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=80.17 E-value=2.9 Score=35.21 Aligned_cols=37 Identities=11% Similarity=0.214 Sum_probs=27.6
Q ss_pred cCCCEEEEECCcchhHHHHHHHHHHhCCCccEEEEEEcCC
Q 008324 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~LvekLl~~~~~V~~V~~lvR~~ 49 (570)
..|.+|+|.|+ |-+|...+..+...+. ..|++..+++
T Consensus 31 ~~g~~vli~Ga-G~vG~~~~~~a~~~g~--~~vv~~~~~~ 67 (172)
T d1h2ba2 31 YPGAYVAIVGV-GGLGHIAVQLLKVMTP--ATVIALDVKE 67 (172)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHCC--CEEEEEESSH
T ss_pred CCCCEEEEeCC-ChHHHHHHHHHHhhcC--cccccccchh
Confidence 45789999986 8899988887777775 4566666653
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=80.12 E-value=1.7 Score=35.71 Aligned_cols=22 Identities=18% Similarity=0.297 Sum_probs=19.6
Q ss_pred EEEEECCcchhHHHHHHHHHHh
Q 008324 14 TILVSGVTGFVAKVFIEKILRV 35 (570)
Q Consensus 14 ~VlITGaTGFlG~~LvekLl~~ 35 (570)
+|.|.|++|=+|+.+++.+.+.
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~ 22 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAA 22 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHS
T ss_pred CEEEECCCCHHHHHHHHHHHhC
Confidence 6899999999999999987764
|