Your job contains 1 sequence.
>008325
MMNYFPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGR
FPGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLEL
LSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCT
SLVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGS
FVYDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHG
NELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAI
SAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAI
VQSCKRLRRLSLSGLLTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLE
IRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQMEFS
LDDRQKVGKMYLYRTLVGPRKDAPDFVWTL
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008325
(570 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|B8Y9B4 - symbol:TIR1 "Transport inhibitor respo... 2888 6.8e-301 1
UNIPROTKB|B9RH07 - symbol:RCOM_1445820 "TRANSPORT INHIBIT... 2407 6.4e-250 1
UNIPROTKB|B9GFH2 - symbol:FBL3 "F-box family protein" spe... 2369 6.8e-246 1
UNIPROTKB|B9N0V8 - symbol:FBL4 "F-box family protein" spe... 2366 1.4e-245 1
UNIPROTKB|Q0Z845 - symbol:TIR1 "Auxin-responsive factor T... 2344 3.0e-243 1
TAIR|locus:2088464 - symbol:AFB2 "AT3G26810" species:3702... 2319 1.3e-240 1
TAIR|locus:2010366 - symbol:AFB3 "AT1G12820" species:3702... 2254 1.0e-233 1
UNIPROTKB|A5JVC9 - symbol:A5JVC9 "Putative uncharacterize... 2173 4.0e-225 1
UNIPROTKB|A5JVD6 - symbol:A5JVD6 "Putative uncharacterize... 2106 5.0e-218 1
UNIPROTKB|A2XSX3 - symbol:OsI_15707 "Putative uncharacter... 1980 1.1e-204 1
UNIPROTKB|Q7XVM8 - symbol:LOC_Os04g32460 "Transport inhib... 1979 1.4e-204 1
UNIPROTKB|B4FJG6 - symbol:ZEAMMB73_540791 "Uncharacterize... 1873 2.5e-193 1
TAIR|locus:2099237 - symbol:TIR1 "AT3G62980" species:3702... 1786 4.1e-184 1
UNIPROTKB|B9S3W2 - symbol:RCOM_0556140 "TRANSPORT INHIBIT... 1764 8.7e-182 1
UNIPROTKB|B9I9W7 - symbol:FBL1 "F-box family protein" spe... 1743 1.5e-179 1
UNIPROTKB|A4KA30 - symbol:TIR1 "Transport inhibitor respo... 1734 1.3e-178 1
UNIPROTKB|A5ARV5 - symbol:VITISV_038840 "Putative unchara... 1729 4.5e-178 1
UNIPROTKB|Q2R3K5 - symbol:LOC_Os11g31620 "Transport inhib... 1718 6.5e-177 1
UNIPROTKB|B9IBT6 - symbol:FBL2 "F-box family protein" spe... 1709 5.9e-176 1
UNIPROTKB|B6UHV2 - symbol:B6UHV2 "Transport inhibitor res... 1660 9.1e-171 1
UNIPROTKB|B4FYV0 - symbol:B4FYV0 "Uncharacterized protein... 1657 1.9e-170 1
TAIR|locus:2125527 - symbol:GRH1 "AT4G03190" species:3702... 1626 3.7e-167 1
UNIPROTKB|B0LXW5 - symbol:TIR1 "Transport inhibitor respo... 1604 7.9e-165 1
UNIPROTKB|Q0DKP3 - symbol:LOC_Os05g05800 "Transport inhib... 1604 7.9e-165 1
UNIPROTKB|B9H216 - symbol:FBL5 "F-box family protein" spe... 1560 3.6e-160 1
UNIPROTKB|B9HZ12 - symbol:FBL6 "F-box family protein" spe... 1537 9.9e-158 1
UNIPROTKB|B9SFB7 - symbol:RCOM_1095990 "TRANSPORT INHIBIT... 1535 1.6e-157 1
UNIPROTKB|B9H6Y0 - symbol:FBL8 "F-box family protein" spe... 1486 2.5e-152 1
UNIPROTKB|B9RJT7 - symbol:RCOM_1038590 "TRANSPORT INHIBIT... 1486 2.5e-152 1
UNIPROTKB|A5AZ08 - symbol:VITISV_002642 "Putative unchara... 1479 1.4e-151 1
UNIPROTKB|Q9AUH6 - symbol:TIR1 "F-box containing protein ... 1474 4.7e-151 1
UNIPROTKB|B9GV20 - symbol:FBL7 "F-box family protein" spe... 1469 1.6e-150 1
TAIR|locus:2158824 - symbol:AFB5 "AT5G49980" species:3702... 1452 1.0e-148 1
TAIR|locus:2135942 - symbol:AFB4 "AT4G24390" species:3702... 1423 1.2e-145 1
UNIPROTKB|A9SYG2 - symbol:TIRB1 "TIR1-like auxin receptor... 1420 2.5e-145 1
UNIPROTKB|A9TAY1 - symbol:TIRB2 "TIRB2 TIR1-like auxin re... 1419 3.2e-145 1
UNIPROTKB|A5AML2 - symbol:VITISV_036655 "Putative unchara... 1054 1.5e-106 1
UNIPROTKB|A5C819 - symbol:VITISV_016565 "Putative unchara... 850 6.2e-85 1
TAIR|locus:2061136 - symbol:COI1 "CORONATINE INSENSITIVE ... 713 2.1e-70 1
TAIR|locus:505006471 - symbol:AT4G15475 "AT4G15475" speci... 209 8.7e-20 2
TAIR|locus:2155578 - symbol:SKIP2 "AT5G67250" species:370... 202 6.3e-13 1
TAIR|locus:2825736 - symbol:VFB1 "VIER F-box proteine 1" ... 193 5.9e-12 1
UNIPROTKB|F1PWK1 - symbol:FBXL2 "Uncharacterized protein"... 190 8.0e-12 1
UNIPROTKB|Q9UKC9 - symbol:FBXL2 "F-box/LRR-repeat protein... 186 2.2e-11 1
UNIPROTKB|Q5R3Z8 - symbol:FBXL2 "F-box/LRR-repeat protein... 186 2.2e-11 1
RGD|1562243 - symbol:Fbxl2 "F-box and leucine-rich repeat... 185 2.9e-11 1
TAIR|locus:2149805 - symbol:AT5G01720 "AT5G01720" species... 186 5.4e-11 1
MGI|MGI:1919429 - symbol:Fbxl2 "F-box and leucine-rich re... 179 1.4e-10 1
UNIPROTKB|Q58DG6 - symbol:FBXL20 "F-box/LRR-repeat protei... 176 3.1e-10 1
UNIPROTKB|Q96IG2 - symbol:FBXL20 "F-box/LRR-repeat protei... 176 3.1e-10 1
MGI|MGI:1919444 - symbol:Fbxl20 "F-box and leucine-rich r... 176 3.1e-10 1
TAIR|locus:2143320 - symbol:AT5G27920 "AT5G27920" species... 158 5.9e-08 1
UNIPROTKB|A6H779 - symbol:FBXL2 "F-box/LRR-repeat protein... 150 2.2e-07 1
WB|WBGene00015350 - symbol:C02F5.7 species:6239 "Caenorha... 150 2.6e-07 1
UNIPROTKB|F1NHD2 - symbol:FBXL2 "Uncharacterized protein"... 148 3.6e-07 1
TAIR|locus:2025222 - symbol:SKP2B "AT1G77000" species:370... 143 9.4e-07 1
TAIR|locus:2083143 - symbol:VFB2 "AT3G50080" species:3702... 144 1.4e-06 1
UNIPROTKB|F1NNA4 - symbol:FBXL7 "Uncharacterized protein"... 121 5.6e-06 2
TAIR|locus:2040105 - symbol:EBF1 "AT2G25490" species:3702... 139 6.7e-06 1
TAIR|locus:2124372 - symbol:VFB3 "AT4G07400" species:3702... 138 7.1e-06 1
TAIR|locus:2027082 - symbol:SKP2A species:3702 "Arabidops... 135 7.3e-06 1
ASPGD|ASPL0000017608 - symbol:grrA species:162425 "Emeric... 125 7.9e-06 2
DICTYBASE|DDB_G0287415 - symbol:DDB_G0287415 "SCF E3 ubiq... 140 9.8e-06 1
UNIPROTKB|F1SRM7 - symbol:FBXL7 "Uncharacterized protein"... 123 2.5e-05 2
MGI|MGI:2443416 - symbol:Fbxl13 "F-box and leucine-rich r... 134 3.2e-05 1
TAIR|locus:2166978 - symbol:AT5G23340 species:3702 "Arabi... 130 3.2e-05 1
UNIPROTKB|D6RDY7 - symbol:FBXL7 "F-box/LRR-repeat protein... 124 3.8e-05 2
UNIPROTKB|J3KNM9 - symbol:FBXL7 "F-box/LRR-repeat protein... 124 4.7e-05 2
UNIPROTKB|Q9UJT9 - symbol:FBXL7 "F-box/LRR-repeat protein... 124 5.1e-05 2
UNIPROTKB|F1N019 - symbol:FBXL7 "Uncharacterized protein"... 120 5.3e-05 2
RGD|1305813 - symbol:Fbxl7 "F-box and leucine-rich repeat... 122 6.4e-05 2
MGI|MGI:3052506 - symbol:Fbxl7 "F-box and leucine-rich re... 122 8.4e-05 2
UNIPROTKB|Q58HZ9 - symbol:SKP2 "S-phase kinase-associated... 124 0.00015 1
UNIPROTKB|Q5ZM99 - symbol:SKP2 "Uncharacterized protein" ... 124 0.00017 1
UNIPROTKB|D2DGZ0 - symbol:SKP2 "S-phase kinase-associated... 123 0.00021 1
RGD|621722 - symbol:Fbxl20 "F-box and leucine-rich repeat... 119 0.00025 1
MGI|MGI:1354704 - symbol:Fbxl17 "F-box and leucine-rich r... 123 0.00027 2
UNIPROTKB|Q13309 - symbol:SKP2 "S-phase kinase-associated... 121 0.00034 1
TAIR|locus:2145512 - symbol:EBF2 "EIN3-binding F box prot... 120 0.00054 2
RGD|1562456 - symbol:Skp2 "S-phase kinase-associated prot... 118 0.00073 1
FB|FBgn0020257 - symbol:ppa "partner of paired" species:7... 119 0.00081 1
ZFIN|ZDB-GENE-061215-122 - symbol:zgc:158346 "zgc:158346"... 119 0.00090 2
UNIPROTKB|E1C3J3 - symbol:FBXL4 "Uncharacterized protein"... 119 0.00099 1
RGD|1305724 - symbol:Fbxl4 "F-box and leucine-rich repeat... 119 0.00099 1
>UNIPROTKB|B8Y9B4 [details] [associations]
symbol:TIR1 "Transport inhibitor response protein"
species:37690 "Citrus trifoliata" [GO:0000822 "inositol
hexakisphosphate binding" evidence=ISS] [GO:0009734 "auxin mediated
signaling pathway" evidence=ISS] InterPro:IPR001810 SMART:SM00256
GO:GO:0009734 GO:GO:0000822 EMBL:FJ502240 Uniprot:B8Y9B4
Length = 569
Score = 2888 (1021.7 bits), Expect = 6.8e-301, P = 6.8e-301
Identities = 554/569 (97%), Positives = 556/569 (97%)
Query: 2 MNYFPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGRF 61
MNYFPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSR SVFIGNCYAISPERVIGRF
Sbjct: 1 MNYFPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRHSVFIGNCYAISPERVIGRF 60
Query: 62 PGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELL 121
PGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELL
Sbjct: 61 PGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELL 120
Query: 122 SRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTS 181
SRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTS
Sbjct: 121 SRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTS 180
Query: 182 LVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGSF 241
LVSLNFSCLKGEINLTALERLVARSPNLK+LRLNRAVPLDTLQKLLMRAPQLVDLGIGSF
Sbjct: 181 LVSLNFSCLKGEINLTALERLVARSPNLKNLRLNRAVPLDTLQKLLMRAPQLVDLGIGSF 240
Query: 242 VYDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGN 301
VYDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGN
Sbjct: 241 VYDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGN 300
Query: 302 ELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAIS 361
ELIKLIRFCRKLERLW+LDSIGDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAIS
Sbjct: 301 ELIKLIRFCRKLERLWVLDSIGDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAIS 360
Query: 362 AGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIV 421
AGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIV
Sbjct: 361 AGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIV 420
Query: 422 QSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLEI 481
QSCK TDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLEI
Sbjct: 421 QSCKHLRRLSLSGLLTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLEI 480
Query: 482 RDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQMEFSL 541
RDSPFGNTALLTDVGKYETMRSLWMS CEVTLGGCQTLAKKMPRLNVEIINEDDQMEFSL
Sbjct: 481 RDSPFGNTALLTDVGKYETMRSLWMSPCEVTLGGCQTLAKKMPRLNVEIINEDDQMEFSL 540
Query: 542 DDRQKVGKMYLYRTLVGPRKDAPDFVWTL 570
DDRQKVGKMYLYRTLVGPRKDAPDFVWTL
Sbjct: 541 DDRQKVGKMYLYRTLVGPRKDAPDFVWTL 569
>UNIPROTKB|B9RH07 [details] [associations]
symbol:RCOM_1445820 "TRANSPORT INHIBITOR RESPONSE 1
protein, putative" species:3988 "Ricinus communis" [GO:0000822
"inositol hexakisphosphate binding" evidence=ISS] [GO:0009734
"auxin mediated signaling pathway" evidence=ISS] InterPro:IPR001810
SMART:SM00256 GO:GO:0009734 ProtClustDB:CLSN2687785 GO:GO:0000822
EMBL:EQ973778 RefSeq:XP_002512866.1 GeneID:8285276
KEGG:rcu:RCOM_1445820 Uniprot:B9RH07
Length = 571
Score = 2407 (852.4 bits), Expect = 6.4e-250, P = 6.4e-250
Identities = 460/571 (80%), Positives = 503/571 (88%)
Query: 2 MNYFPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGRF 61
MNYFPDEV+EHVFDFVTS +DRN+VS VCKSWY+IE SR+ VFIGNCYAISPERVI RF
Sbjct: 1 MNYFPDEVLEHVFDFVTSHRDRNSVSQVCKSWYRIESCSRRKVFIGNCYAISPERVIERF 60
Query: 62 PGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELL 121
P LKS+TLKGKPHFADFNL+P+DWGG+VYPW+EA A+ RVGLEELRLKRMVVSD+ LELL
Sbjct: 61 PDLKSITLKGKPHFADFNLVPHDWGGYVYPWIEAFARHRVGLEELRLKRMVVSDESLELL 120
Query: 122 SRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTS 181
SRSF+NFKSLVLVSCEGFTTDGLA++AANCRY+RELDLQE EV+D+RG W+SCFPDS T
Sbjct: 121 SRSFLNFKSLVLVSCEGFTTDGLASVAANCRYIRELDLQENEVEDHRGHWLSCFPDSSTC 180
Query: 182 LVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGSF 241
L SLNF+CLKG+INL LERLVARSPNL+SLRLNRAVPLDTLQK+LM+APQLVDLG+GS+
Sbjct: 181 LTSLNFACLKGDINLGVLERLVARSPNLRSLRLNRAVPLDTLQKILMQAPQLVDLGVGSY 240
Query: 242 VYDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGN 301
V+DP SE Y KL A + KCKS+RSLSGFL+V P CL A H +C NLTSLNLSYAPGI G+
Sbjct: 241 VHDPDSETYSKLVAAVQKCKSVRSLSGFLDVAPHCLPAFHLMCPNLTSLNLSYAPGIQGS 300
Query: 302 ELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSG--VDNAAVTEEGLVA 359
EL KLIR CRKL+RLWILD IGD+GL VVA TCK+LQELRVFPS V NAAVTEEGLVA
Sbjct: 301 ELTKLIRHCRKLQRLWILDCIGDKGLEVVASTCKDLQELRVFPSDLYVGNAAVTEEGLVA 360
Query: 360 ISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGA 419
IS+GCPKL S+LYFCQQMTNAALITVAKN NFTRFRLCILD KPD VTMQPLDEGFGA
Sbjct: 361 ISSGCPKLDSILYFCQQMTNAALITVAKNCPNFTRFRLCILDPTKPDAVTMQPLDEGFGA 420
Query: 420 IVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKL 479
IV SC+ TDQVFLYIGMYAE LEMLSIAFAGNSDKGM YVLNGCKKLRKL
Sbjct: 421 IVHSCRGLRRLSLSGLLTDQVFLYIGMYAEHLEMLSIAFAGNSDKGMQYVLNGCKKLRKL 480
Query: 480 EIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQMEF 539
EIRDSPFGN ALL DVGKYETMRSLWMSSCEVTLGGC+TLAKKMP LNVEI+NE++Q +F
Sbjct: 481 EIRDSPFGNAALLMDVGKYETMRSLWMSSCEVTLGGCKTLAKKMPWLNVEIMNENEQADF 540
Query: 540 SLDDRQKVGKMYLYRTLVGPRKDAPDFVWTL 570
S DD QKV KMYLYRTLVG R DAPDFVWTL
Sbjct: 541 SADDTQKVDKMYLYRTLVGHRNDAPDFVWTL 571
>UNIPROTKB|B9GFH2 [details] [associations]
symbol:FBL3 "F-box family protein" species:3694 "Populus
trichocarpa" [GO:0000822 "inositol hexakisphosphate binding"
evidence=ISS] [GO:0009734 "auxin mediated signaling pathway"
evidence=ISS] InterPro:IPR001810 SMART:SM00256 GO:GO:0005886
GO:GO:0009734 GO:GO:0048527 GO:GO:0048443 GO:GO:0010152
GO:GO:0010011 eggNOG:NOG259467 HOGENOM:HOG000239805
ProtClustDB:CLSN2687785 GO:GO:0000822 GO:GO:0002237 OMA:MEQNEED
GO:GO:0071249 GO:GO:0080022 EMBL:CM000337 RefSeq:XP_002300140.1
UniGene:Pth.11296 EnsemblPlants:POPTR_0001s33030.1 GeneID:7495822
KEGG:pop:POPTR_549767 Uniprot:B9GFH2
Length = 571
Score = 2369 (839.0 bits), Expect = 6.8e-246, P = 6.8e-246
Identities = 445/571 (77%), Positives = 498/571 (87%)
Query: 2 MNYFPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGRF 61
MNYFPDEV+EH+FDFVTSQ+DRN+VS VCK WYKIE SRQ VF+GNCYAISPERVI RF
Sbjct: 1 MNYFPDEVLEHIFDFVTSQRDRNSVSQVCKPWYKIESTSRQKVFVGNCYAISPERVIERF 60
Query: 62 PGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELL 121
PGLKS+TLKGKPHFADFNL+P+DWGG+VYPW+EA A++ +GLEEL+LKRM++SD+CLEL+
Sbjct: 61 PGLKSITLKGKPHFADFNLVPHDWGGFVYPWIEAFARNNMGLEELKLKRMIISDECLELI 120
Query: 122 SRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTS 181
SRSF NFKSLVLVSCEGF+TDGLAAIA+NCR+LRELDLQE +V+D+RG W+S FPD+CTS
Sbjct: 121 SRSFANFKSLVLVSCEGFSTDGLAAIASNCRFLRELDLQENDVEDHRGHWLSFFPDTCTS 180
Query: 182 LVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGSF 241
LVSLNF+CLKG++NL ALERLVARSPNL+SLRLN AVPLD LQK+LMRAP LVDLG+GS+
Sbjct: 181 LVSLNFACLKGDVNLAALERLVARSPNLRSLRLNHAVPLDILQKILMRAPHLVDLGVGSY 240
Query: 242 VYDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGN 301
V+DP SE Y KL L KCKS++SLSGFLE P CLSA H +C NLTSLNLSYAPGIHG
Sbjct: 241 VHDPDSETYNKLVTALQKCKSVKSLSGFLEAAPQCLSAFHLICPNLTSLNLSYAPGIHGT 300
Query: 302 ELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSG--VDNAAVTEEGLVA 359
ELIKLIR CRKL+RLWILD IGD GL VVA TCK LQE+RVFPS V NAAVTE GLVA
Sbjct: 301 ELIKLIRHCRKLQRLWILDCIGDEGLEVVASTCKHLQEIRVFPSDPFVGNAAVTEVGLVA 360
Query: 360 ISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGA 419
+S+GC LHS+LYFCQQMTNAALITVAKN NFTRFRLCILD KPD T QPLDEGFGA
Sbjct: 361 LSSGCRNLHSILYFCQQMTNAALITVAKNCPNFTRFRLCILDPTKPDADTNQPLDEGFGA 420
Query: 420 IVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKL 479
IV SCK TDQVFLYIGMYAEQLEMLSIAFAG++DKGM Y+LNGCKKLRKL
Sbjct: 421 IVHSCKGLRRLSMSGLLTDQVFLYIGMYAEQLEMLSIAFAGDTDKGMQYLLNGCKKLRKL 480
Query: 480 EIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQMEF 539
EIRD PFGN ALL DVGKYETMRSLWMSSC++TLGGC++LAKKMPRLNVEIINE DQM+
Sbjct: 481 EIRDCPFGNAALLMDVGKYETMRSLWMSSCDITLGGCKSLAKKMPRLNVEIINESDQMDI 540
Query: 540 SLDDRQKVGKMYLYRTLVGPRKDAPDFVWTL 570
+ DD QKV KM+LYRTL G RKDAP+FVWTL
Sbjct: 541 TADDGQKVEKMFLYRTLAGRRKDAPEFVWTL 571
>UNIPROTKB|B9N0V8 [details] [associations]
symbol:FBL4 "F-box family protein" species:3694 "Populus
trichocarpa" [GO:0000822 "inositol hexakisphosphate binding"
evidence=ISS] [GO:0009734 "auxin mediated signaling pathway"
evidence=ISS] InterPro:IPR001810 SMART:SM00256 GO:GO:0005886
GO:GO:0009734 GO:GO:0048527 GO:GO:0048443 GO:GO:0010152
GO:GO:0010011 eggNOG:NOG259467 HOGENOM:HOG000239805 OMA:WLSCFPD
ProtClustDB:CLSN2687785 GO:GO:0000822 GO:GO:0002237 GO:GO:0071249
GO:GO:0080022 EMBL:DS017279 RefSeq:XP_002328871.1 UniGene:Pth.13001
EnsemblPlants:POPTR_0017s08860.1 GeneID:7481617
KEGG:pop:POPTR_742822 Uniprot:B9N0V8
Length = 571
Score = 2366 (837.9 bits), Expect = 1.4e-245, P = 1.4e-245
Identities = 445/571 (77%), Positives = 500/571 (87%)
Query: 2 MNYFPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGRF 61
MNYFPDEV+EH+FDFVTSQ+DRN+VS VCK WYKIE SRQ VF+GNCYAISP+RVI RF
Sbjct: 1 MNYFPDEVLEHIFDFVTSQRDRNSVSQVCKPWYKIESSSRQKVFVGNCYAISPQRVIERF 60
Query: 62 PGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELL 121
PGLKS+TLKGKPHFADFNL+P DWGG+VYPW+EA A++ VGLEEL+LKRM++SD+CLEL+
Sbjct: 61 PGLKSITLKGKPHFADFNLVPNDWGGFVYPWIEAFARNSVGLEELKLKRMIISDECLELI 120
Query: 122 SRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTS 181
SRSF NFKSLVLVSCEGFT DGLAAIA+NCR+LRELDLQE +V+D+RG W+SCFPD+CTS
Sbjct: 121 SRSFPNFKSLVLVSCEGFTADGLAAIASNCRFLRELDLQENDVEDHRGHWLSCFPDTCTS 180
Query: 182 LVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGSF 241
LVSLNF+CLKGE+N+ ALERL+ARSPNL+SLRLN AVPLD LQK+L+RAP LVDLG+GS+
Sbjct: 181 LVSLNFACLKGEVNVAALERLIARSPNLRSLRLNHAVPLDVLQKILIRAPHLVDLGVGSY 240
Query: 242 VYDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGN 301
V DP SE Y KL + KC S++SLSGFLEV P CLSA H +C NLTSLNLSYAPGIHG
Sbjct: 241 VNDPDSETYNKLVMAIQKCMSVKSLSGFLEVAPHCLSAFHLICPNLTSLNLSYAPGIHGA 300
Query: 302 ELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSG--VDNAAVTEEGLVA 359
ELIKLIR C KL+RLWILD IGD+GL VVA TCK+LQE+RVFPS V NAAVTE GLVA
Sbjct: 301 ELIKLIRHCMKLQRLWILDCIGDQGLEVVASTCKDLQEIRVFPSDPHVGNAAVTEVGLVA 360
Query: 360 ISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGA 419
+S+GC KLHS+LYFCQQMTN ALITVAKN NFTRFRLCILD KPD VT QPLDEGFGA
Sbjct: 361 LSSGCRKLHSILYFCQQMTNVALITVAKNCPNFTRFRLCILDPTKPDAVTNQPLDEGFGA 420
Query: 420 IVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKL 479
IV SCK TD+VFLYIGMYAEQLEMLSIAFAG++DKGM Y+LNGCKKLRKL
Sbjct: 421 IVHSCKGLRRLSMTGLLTDKVFLYIGMYAEQLEMLSIAFAGDTDKGMQYLLNGCKKLRKL 480
Query: 480 EIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQMEF 539
EIRD PFGN ALL DVGKYETMRSLWMSSCEVTLGGC++LAKKMPRLNVEIINE+DQM+
Sbjct: 481 EIRDCPFGNAALLMDVGKYETMRSLWMSSCEVTLGGCKSLAKKMPRLNVEIINENDQMDA 540
Query: 540 SLDDRQKVGKMYLYRTLVGPRKDAPDFVWTL 570
S DDRQKV KM+LYRTL G R+DAP+FVWTL
Sbjct: 541 SADDRQKVEKMFLYRTLAGRREDAPEFVWTL 571
>UNIPROTKB|Q0Z845 [details] [associations]
symbol:TIR1 "Auxin-responsive factor TIR1-like protein"
species:118781 "Populus tomentosa" [GO:0000822 "inositol
hexakisphosphate binding" evidence=ISS] [GO:0009734 "auxin mediated
signaling pathway" evidence=ISS] InterPro:IPR001810 SMART:SM00256
GO:GO:0009734 GO:GO:0000822 EMBL:DQ666686 ProteinModelPortal:Q0Z845
SMR:Q0Z845 Uniprot:Q0Z845
Length = 571
Score = 2344 (830.2 bits), Expect = 3.0e-243, P = 3.0e-243
Identities = 442/571 (77%), Positives = 497/571 (87%)
Query: 2 MNYFPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGRF 61
MNYFPDEV+EHVFDFVTSQ+DRN+VS VCK WYKIE SRQ VF+GNCYAISPERVI RF
Sbjct: 1 MNYFPDEVLEHVFDFVTSQRDRNSVSQVCKPWYKIESSSRQKVFVGNCYAISPERVIERF 60
Query: 62 PGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELL 121
PGLKS+TLKGKPHFADFN++P+DWGG+VYPW+EA A++ +GLEEL+LKRM++SD+CLEL+
Sbjct: 61 PGLKSITLKGKPHFADFNMVPHDWGGFVYPWIEAFARNNMGLEELKLKRMIISDECLELI 120
Query: 122 SRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTS 181
SRSF NFKSLVLVSC GF+TDGLAAIA+NCR+LRELDLQE +V+D+RG W+S FPD+CTS
Sbjct: 121 SRSFANFKSLVLVSCVGFSTDGLAAIASNCRFLRELDLQENDVEDHRGYWLSFFPDTCTS 180
Query: 182 LVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGSF 241
LVSLNF+CLKG++NL ALERLVARSPNL+SLRLN AVPLD LQK+LMRAP LVDLG+GS+
Sbjct: 181 LVSLNFACLKGDVNLAALERLVARSPNLRSLRLNHAVPLDILQKILMRAPHLVDLGVGSY 240
Query: 242 VYDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGN 301
V+DP SE Y KL L KCKS++SLSGFLE P CL A H +C NLTSLNLSYAPGIHG
Sbjct: 241 VHDPDSETYNKLVTALQKCKSVKSLSGFLEAAPQCLPAFHLICPNLTSLNLSYAPGIHGT 300
Query: 302 ELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSG--VDNAAVTEEGLVA 359
ELIKLIR CRKL+RLWILD IGD GL VVA TCK+LQE+RVFPS V +AAVTE GLVA
Sbjct: 301 ELIKLIRHCRKLQRLWILDCIGDEGLEVVASTCKDLQEIRVFPSDLHVGDAAVTEVGLVA 360
Query: 360 ISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGA 419
+S+GCP LHS+LYFCQQMTNAALITVAKN NFTRFRLCILD KPD T QPLDEGFGA
Sbjct: 361 LSSGCPNLHSILYFCQQMTNAALITVAKNCPNFTRFRLCILDPTKPDGDTNQPLDEGFGA 420
Query: 420 IVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKL 479
IV CK TDQVFLYIGMYAEQLEMLSIAFAG++DKGM Y+L+GCKKLRKL
Sbjct: 421 IVHLCKGLRRLSMSGLLTDQVFLYIGMYAEQLEMLSIAFAGDTDKGMQYLLSGCKKLRKL 480
Query: 480 EIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQMEF 539
EIRD PFGN ALL DVGKYETMRSLWMSSCEVTLGGC++LAKKMPRLNVEIINE+DQM+
Sbjct: 481 EIRDCPFGNAALLMDVGKYETMRSLWMSSCEVTLGGCRSLAKKMPRLNVEIINENDQMDA 540
Query: 540 SLDDRQKVGKMYLYRTLVGPRKDAPDFVWTL 570
S DD KV KM+LYRTL G R+DAP+FVWTL
Sbjct: 541 SADDTLKVEKMFLYRTLAGRREDAPEFVWTL 571
>TAIR|locus:2088464 [details] [associations]
symbol:AFB2 "AT3G26810" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0010011
"auxin binding" evidence=IGI] [GO:0002237 "response to molecule of
bacterial origin" evidence=IEP;RCA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0010152 "pollen maturation" evidence=IGI]
[GO:0048443 "stamen development" evidence=IGI;RCA] [GO:0007165
"signal transduction" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] InterPro:IPR001810 PROSITE:PS50181
SMART:SM00256 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0005774
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006952 GO:GO:0009734
GO:GO:0048443 GO:GO:0010152 GO:GO:0016567 GO:GO:0010011
EMBL:AB016889 EMBL:AY062568 EMBL:BT010396 IPI:IPI00520683
RefSeq:NP_566800.1 UniGene:At.6031 ProteinModelPortal:Q9LW29
SMR:Q9LW29 DIP:DIP-34608N IntAct:Q9LW29 STRING:Q9LW29 PaxDb:Q9LW29
PRIDE:Q9LW29 EnsemblPlants:AT3G26810.1 GeneID:822296
KEGG:ath:AT3G26810 TAIR:At3g26810 eggNOG:NOG259467
HOGENOM:HOG000239805 InParanoid:Q9LW29 OMA:WLSCFPD PhylomeDB:Q9LW29
ProtClustDB:CLSN2687785 Genevestigator:Q9LW29 GO:GO:0019005
GO:GO:0000822 GO:GO:0002237 Uniprot:Q9LW29
Length = 575
Score = 2319 (821.4 bits), Expect = 1.3e-240, P = 1.3e-240
Identities = 444/575 (77%), Positives = 501/575 (87%)
Query: 2 MNYFPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGRF 61
MNYFPDEVIEHVFDFVTS KDRNA+SLVCKSWYKIER SRQ VFIGNCYAI+PER++ RF
Sbjct: 1 MNYFPDEVIEHVFDFVTSHKDRNAISLVCKSWYKIERYSRQKVFIGNCYAINPERLLRRF 60
Query: 62 PGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELL 121
P LKSLTLKGKPHFADFNL+P++WGG+V PW+EALA+SRVGLEELRLKRMVV+D+ LELL
Sbjct: 61 PCLKSLTLKGKPHFADFNLVPHEWGGFVLPWIEALARSRVGLEELRLKRMVVTDESLELL 120
Query: 122 SRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTS 181
SRSFVNFKSLVLVSCEGFTTDGLA+IAANCR+LR+LDLQE E+DD+RGQW+SCFPD+CT+
Sbjct: 121 SRSFVNFKSLVLVSCEGFTTDGLASIAANCRHLRDLDLQENEIDDHRGQWLSCFPDTCTT 180
Query: 182 LVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGSF 241
LV+LNF+CL+GE NL ALERLVARSPNLKSL+LNRAVPLD L +L+ APQ+VDLG+GS+
Sbjct: 181 LVTLNFACLEGETNLVALERLVARSPNLKSLKLNRAVPLDALARLMACAPQIVDLGVGSY 240
Query: 242 VYDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGN 301
DP SE+Y+KL A + KC S+RSLSGFLE P CLSA HP+C NLTSLNLSYA IHG+
Sbjct: 241 ENDPDSESYLKLMAVIKKCTSLRSLSGFLEAAPHCLSAFHPICHNLTSLNLSYAAEIHGS 300
Query: 302 ELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPS---GVDNAAVTEEGLV 358
LIKLI+ C+KL+RLWILDSIGD+GL VVA TCKELQELRVFPS G N AVTEEGLV
Sbjct: 301 HLIKLIQHCKKLQRLWILDSIGDKGLEVVASTCKELQELRVFPSDLLGGGNTAVTEEGLV 360
Query: 359 AISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFG 418
AISAGCPKLHS+LYFCQQMTNAAL+TVAKN NF RFRLCIL+ KPD VT QPLDEGFG
Sbjct: 361 AISAGCPKLHSILYFCQQMTNAALVTVAKNCPNFIRFRLCILEPNKPDHVTSQPLDEGFG 420
Query: 419 AIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRK 478
AIV++CK TDQVFLYIGMYA QLEMLSIAFAG++DKGMLYVLNGCKK++K
Sbjct: 421 AIVKACKSLRRLSLSGLLTDQVFLYIGMYANQLEMLSIAFAGDTDKGMLYVLNGCKKMKK 480
Query: 479 LEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDD--Q 536
LEIRDSPFG+TALL DV KYETMRSLWMSSCEVTL GC+ LA+K P LNVEIINE+D +
Sbjct: 481 LEIRDSPFGDTALLADVSKYETMRSLWMSSCEVTLSGCKRLAEKAPWLNVEIINENDNNR 540
Query: 537 MEFS-LDDRQKVGKMYLYRTLVGPRKDAPDFVWTL 570
ME + + RQKV K+YLYRT+VG R DAP FVW L
Sbjct: 541 MEENGHEGRQKVDKLYLYRTVVGTRMDAPPFVWIL 575
>TAIR|locus:2010366 [details] [associations]
symbol:AFB3 "AT1G12820" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0010011
"auxin binding" evidence=IGI] [GO:0002237 "response to molecule of
bacterial origin" evidence=IEP;RCA] [GO:0010152 "pollen maturation"
evidence=IGI] [GO:0048443 "stamen development" evidence=IGI;RCA]
[GO:0048527 "lateral root development" evidence=IMP] [GO:0071249
"cellular response to nitrate" evidence=IEP] [GO:0080022 "primary
root development" evidence=IMP] [GO:0000394 "RNA splicing, via
endonucleolytic cleavage and ligation" evidence=RCA] [GO:0007165
"signal transduction" evidence=RCA] [GO:0009086 "methionine
biosynthetic process" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] InterPro:IPR001810 PROSITE:PS50181
SMART:SM00256 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006952 GO:GO:0009734
GO:GO:0048527 GO:GO:0048443 GO:GO:0010152 GO:GO:0016567
GO:GO:0010011 HOGENOM:HOG000239805 ProtClustDB:CLSN2687785
GO:GO:0019005 GO:GO:0000822 GO:GO:0002237 EMBL:AC012187
EMBL:AY099541 EMBL:BT002118 EMBL:AK227280 IPI:IPI00520794
PIR:F86261 RefSeq:NP_563915.1 UniGene:At.23978 UniGene:At.71229
ProteinModelPortal:Q9LPW7 SMR:Q9LPW7 IntAct:Q9LPW7 STRING:Q9LPW7
PaxDb:Q9LPW7 PRIDE:Q9LPW7 EnsemblPlants:AT1G12820.1 GeneID:837838
KEGG:ath:AT1G12820 TAIR:At1g12820 eggNOG:NOG314738
InParanoid:Q9LPW7 OMA:MEQNEED PhylomeDB:Q9LPW7
Genevestigator:Q9LPW7 GO:GO:0071249 GO:GO:0080022 Uniprot:Q9LPW7
Length = 577
Score = 2254 (798.5 bits), Expect = 1.0e-233, P = 1.0e-233
Identities = 431/574 (75%), Positives = 495/574 (86%)
Query: 2 MNYFPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGRF 61
MNYFPDEVIEHVFDFV S KDRN++SLVCKSW+KIER SR+ VFIGNCYAI+PER+I RF
Sbjct: 1 MNYFPDEVIEHVFDFVASHKDRNSISLVCKSWHKIERFSRKEVFIGNCYAINPERLIRRF 60
Query: 62 PGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELL 121
P LKSLTLKGKPHFADFNL+P++WGG+V+PW+EALA+SRVGLEELRLKRMVV+D+ L+LL
Sbjct: 61 PCLKSLTLKGKPHFADFNLVPHEWGGFVHPWIEALARSRVGLEELRLKRMVVTDESLDLL 120
Query: 122 SRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTS 181
SRSF NFKSLVLVSCEGFTTDGLA+IAANCR+LRELDLQE E+DD+RGQW++CFPDSCT+
Sbjct: 121 SRSFANFKSLVLVSCEGFTTDGLASIAANCRHLRELDLQENEIDDHRGQWLNCFPDSCTT 180
Query: 182 LVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGSF 241
L+SLNF+CLKGE N+ ALERLVARSPNLKSL+LNRAVPLD L +L+ APQLVDLG+GS+
Sbjct: 181 LMSLNFACLKGETNVAALERLVARSPNLKSLKLNRAVPLDALARLMSCAPQLVDLGVGSY 240
Query: 242 VYDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGN 301
+P E++ KL + K S+RSLSGFLEV P CL A +P+CQNL SLNLSYA I GN
Sbjct: 241 ENEPDPESFAKLMTAIKKYTSLRSLSGFLEVAPLCLPAFYPICQNLISLNLSYAAEIQGN 300
Query: 302 ELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGV-----DNAAVTEEG 356
LIKLI+ C++L+RLWILDSIGD+GL VVA TCKELQELRVFPS V +NA+VTE G
Sbjct: 301 HLIKLIQLCKRLQRLWILDSIGDKGLAVVAATCKELQELRVFPSDVHGEEDNNASVTEVG 360
Query: 357 LVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEG 416
LVAISAGCPKLHS+LYFC+QMTNAALI VAKN NF RFRLCIL+ KPD +T Q LDEG
Sbjct: 361 LVAISAGCPKLHSILYFCKQMTNAALIAVAKNCPNFIRFRLCILEPHKPDHITFQSLDEG 420
Query: 417 FGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKL 476
FGAIVQ+CK TDQVFLYIGMYAEQLEMLSIAFAG++DKGMLYVLNGCKK+
Sbjct: 421 FGAIVQACKGLRRLSVSGLLTDQVFLYIGMYAEQLEMLSIAFAGDTDKGMLYVLNGCKKM 480
Query: 477 RKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQ 536
RKLEIRDSPFGN ALL DVG+YETMRSLWMSSCEVTLGGC+ LA+ PRLNVEIINE++
Sbjct: 481 RKLEIRDSPFGNAALLADVGRYETMRSLWMSSCEVTLGGCKRLAQNSPRLNVEIINENEN 540
Query: 537 --MEFSLDD-RQKVGKMYLYRTLVGPRKDAPDFV 567
ME + +D R+KV K+YLYRT+VG RKDAP +V
Sbjct: 541 NGMEQNEEDEREKVDKLYLYRTVVGTRKDAPPYV 574
>UNIPROTKB|A5JVC9 [details] [associations]
symbol:A5JVC9 "Putative uncharacterized protein"
species:3711 "Brassica rapa" [GO:0000822 "inositol hexakisphosphate
binding" evidence=ISS] [GO:0009734 "auxin mediated signaling
pathway" evidence=ISS] InterPro:IPR001810 SMART:SM00256
GO:GO:0009734 GO:GO:0000822 EMBL:EF584012 ProteinModelPortal:A5JVC9
SMR:A5JVC9 Uniprot:A5JVC9
Length = 590
Score = 2173 (770.0 bits), Expect = 4.0e-225, P = 4.0e-225
Identities = 418/577 (72%), Positives = 489/577 (84%)
Query: 2 MNYFPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGRF 61
MNYFPDEVIEH+FDF+ S +DRN++SLV KSW+KIER SR VFIGNCYAISPER+I RF
Sbjct: 14 MNYFPDEVIEHIFDFIPSHRDRNSISLVSKSWHKIERYSRHQVFIGNCYAISPERLIRRF 73
Query: 62 PGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELL 121
P L+SLTLKGKPHFADFNL+P++WGG+++PW++AL+K+RVGLEELRLKRMVVSD+ LELL
Sbjct: 74 PCLRSLTLKGKPHFADFNLVPHEWGGFLHPWIDALSKARVGLEELRLKRMVVSDESLELL 133
Query: 122 SRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTS 181
SRSFV FKSLVLVSC+GFTTDGLA+IAANCR LRELDLQE E+DD+RGQW++CFPDS T+
Sbjct: 134 SRSFVGFKSLVLVSCDGFTTDGLASIAANCRNLRELDLQENEIDDHRGQWLNCFPDSSTT 193
Query: 182 LVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGSF 241
LVSLNF+CLKGE NL+ALERLVARSPNLKSL++NRAVPLD L +L+ APQLVDLG+G +
Sbjct: 194 LVSLNFACLKGETNLSALERLVARSPNLKSLKVNRAVPLDALTRLMSCAPQLVDLGVGCY 253
Query: 242 VYDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGN 301
+ E++ KL A + KC +RSLSGF EV P CL+A +P+C+NLTSLNLSYA + GN
Sbjct: 254 ENEAEPESFEKLMAAIKKCTLLRSLSGFSEVAPICLTAFYPICENLTSLNLSYAAELQGN 313
Query: 302 ELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGV-----DNAAVTEEG 356
LI+ ++FC++L+ LWILDSIGDRGL VVA +CKELQELRVFPS +N AVTE G
Sbjct: 314 HLIEFVQFCKRLQLLWILDSIGDRGLEVVASSCKELQELRVFPSDPHDEEDNNTAVTEVG 373
Query: 357 LVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEG 416
LVAISAGCPKLHS+LYFC+QMTNAALITVAKN NF RFRLCIL+ K D +T Q LDEG
Sbjct: 374 LVAISAGCPKLHSILYFCKQMTNAALITVAKNCPNFIRFRLCILEPNKSDHITSQSLDEG 433
Query: 417 FGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKL 476
FGAIVQ+CK TD+VFLYIGMYAEQLEMLSIAFAG++DKGMLYVLNGCKKL
Sbjct: 434 FGAIVQACKGLRRLSVSGLLTDKVFLYIGMYAEQLEMLSIAFAGDTDKGMLYVLNGCKKL 493
Query: 477 RKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDD- 535
RKLEIRDSPFGN ALL DVGKYETMRSLWMSSCEVTLGGC+ LA+ P LNVEIINE++
Sbjct: 494 RKLEIRDSPFGNAALLADVGKYETMRSLWMSSCEVTLGGCKRLARNAPWLNVEIINENEN 553
Query: 536 -QMEFSLDD-RQKVGKMYLYRTLVGPRKDAPDFVWTL 570
+ME + +D R+KV ++YLYRT+VG RKDAP V L
Sbjct: 554 GRMERNEEDEREKVDRLYLYRTVVGTRKDAPPCVTIL 590
>UNIPROTKB|A5JVD6 [details] [associations]
symbol:A5JVD6 "Putative uncharacterized protein"
species:3711 "Brassica rapa" [GO:0000822 "inositol hexakisphosphate
binding" evidence=ISS] [GO:0009734 "auxin mediated signaling
pathway" evidence=ISS] InterPro:IPR001810 SMART:SM00256
GO:GO:0009734 GO:GO:0000822 EMBL:EF584013 ProteinModelPortal:A5JVD6
SMR:A5JVD6 Uniprot:A5JVD6
Length = 715
Score = 2106 (746.4 bits), Expect = 5.0e-218, P = 5.0e-218
Identities = 407/568 (71%), Positives = 478/568 (84%)
Query: 2 MNYFPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGRF 61
MNYFPDEVIEH+FDF+ S +DRN++SLV KSW+KIER SR VFIGNCYAISPER+I RF
Sbjct: 1 MNYFPDEVIEHIFDFIPSHRDRNSISLVSKSWHKIERYSRHQVFIGNCYAISPERLIRRF 60
Query: 62 PGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELL 121
P L+SLTLKGKPHFADFNL+P++WGG+++PW++AL+K+RVGLEELRLKRMVVSD+ LELL
Sbjct: 61 PCLRSLTLKGKPHFADFNLVPHEWGGFLHPWIDALSKARVGLEELRLKRMVVSDESLELL 120
Query: 122 SRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTS 181
SRSFV FKSLVLVSC+GFTTDGLA+IAANCR LRELDLQE E+DD+RGQW++CFPDS T+
Sbjct: 121 SRSFVGFKSLVLVSCDGFTTDGLASIAANCRNLRELDLQENEIDDHRGQWLNCFPDSSTT 180
Query: 182 LVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGSF 241
LVSLNF+CLKGE NL+ALERLVARSPNLKSL++NRAVPLD L +L+ APQLVDLG+G +
Sbjct: 181 LVSLNFACLKGETNLSALERLVARSPNLKSLKVNRAVPLDALTRLMSCAPQLVDLGVGCY 240
Query: 242 VYDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGN 301
+ E++ KL A + KC +RSLSGF EV P CL+A +P+C+NLTSLNLSYA + GN
Sbjct: 241 ENEAEPESFEKLMAAIKKCTLLRSLSGFSEVAPICLTAFYPICENLTSLNLSYAAELQGN 300
Query: 302 ELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGV-----DNAAVTEEG 356
LI+ ++FC++L+ LWILDSIGDRGL VVA +CKELQELRVFPS +N AVTE G
Sbjct: 301 HLIEFVQFCKRLQLLWILDSIGDRGLEVVASSCKELQELRVFPSDPHDEEDNNTAVTEVG 360
Query: 357 LVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEG 416
LVAISAGCPKLHS+LYFC+QMTNAALITVAKN NF RFRLCIL+ K D +T Q LDEG
Sbjct: 361 LVAISAGCPKLHSILYFCKQMTNAALITVAKNCPNFIRFRLCILEPNKSDHITSQSLDEG 420
Query: 417 FGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKL 476
FGAIVQ+CK TD+VFLYIGMYAEQLEMLSIAFAG++DKGMLYVLNGCKKL
Sbjct: 421 FGAIVQACKGLRRLSVSGLLTDKVFLYIGMYAEQLEMLSIAFAGDTDKGMLYVLNGCKKL 480
Query: 477 RKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDD- 535
RKLEIRDSPFGN ALL DVGKYETMRSLWMSSCEVTLGGC+ LA+ P LNVEIINE++
Sbjct: 481 RKLEIRDSPFGNAALLADVGKYETMRSLWMSSCEVTLGGCKRLARNAPWLNVEIINENEN 540
Query: 536 -QMEFSLDD-RQKVGKMYL-YRTLVGPR 560
+ME + +D R+K+ K + T V P+
Sbjct: 541 GRMERNEEDEREKLLKCHTSINTNVAPK 568
>UNIPROTKB|A2XSX3 [details] [associations]
symbol:OsI_15707 "Putative uncharacterized protein"
species:39946 "Oryza sativa Indica Group" [GO:0000822 "inositol
hexakisphosphate binding" evidence=ISS] [GO:0009734 "auxin mediated
signaling pathway" evidence=ISS] InterPro:IPR001810 SMART:SM00256
GO:GO:0009734 eggNOG:NOG259467 HOGENOM:HOG000239805 GO:GO:0000822
EMBL:CM000129 ProteinModelPortal:A2XSX3 SMR:A2XSX3 Gramene:A2XSX3
Uniprot:A2XSX3
Length = 575
Score = 1980 (702.1 bits), Expect = 1.1e-204, P = 1.1e-204
Identities = 375/572 (65%), Positives = 456/572 (79%)
Query: 2 MNYFPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGRF 61
M YFP+EV+EH+F F+ +Q+DRN VSLVCK WY+IERLSR+ VF+GNCYA+ RV RF
Sbjct: 1 MTYFPEEVVEHIFSFLPAQRDRNTVSLVCKVWYEIERLSRRGVFVGNCYAVRAGRVAARF 60
Query: 62 PGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELL 121
P +++LT+KGKPHFADFNL+P DWGG+ PW+EA A+ GLEELR+KRMVVSD+ LELL
Sbjct: 61 PNVRALTVKGKPHFADFNLVPPDWGGYAAPWIEAAARGCHGLEELRMKRMVVSDESLELL 120
Query: 122 SRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTS 181
+RSF F++LVL+SCEGF+TDGLAA+A++C+ LRELDLQE EV+D +W+SCFPDSCTS
Sbjct: 121 ARSFPRFRALVLISCEGFSTDGLAAVASHCKLLRELDLQENEVEDRGPRWLSCFPDSCTS 180
Query: 182 LVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGSF 241
LVSLNF+C+KGE+N +LERLV+RSPNL+SLRLNR+V +DTL K+L+R P L DLG G+
Sbjct: 181 LVSLNFACIKGEVNAGSLERLVSRSPNLRSLRLNRSVSVDTLAKILLRTPNLEDLGTGNL 240
Query: 242 VYDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGN 301
D +E+Y KL + L KCK +RSLSGF + P CLS I+P+C LT LNLSYAP + +
Sbjct: 241 TDDFQTESYFKLTSALEKCKMLRSLSGFWDASPVCLSFIYPLCAQLTGLNLSYAPTLDAS 300
Query: 302 ELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSG---VDNAAVTEEGLV 358
+L K+I C KL+RLW+LD I D+GL VVA +CK+LQELRVFPS +AVTEEGLV
Sbjct: 301 DLTKMISRCVKLQRLWVLDCISDKGLQVVASSCKDLQELRVFPSDFYVAGYSAVTEEGLV 360
Query: 359 AISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFG 418
A+S GCPKL+SLLYFC QMTNAAL+TVAKN NFTRFRLCIL+ KPD VT QPLDEGFG
Sbjct: 361 AVSLGCPKLNSLLYFCHQMTNAALVTVAKNCPNFTRFRLCILEPGKPDVVTSQPLDEGFG 420
Query: 419 AIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRK 478
AIV+ CK TD+VF+YIG YA+QLEMLSIAFAG+SDKGM++V+NGCK LRK
Sbjct: 421 AIVRECKGLQRLSISGLLTDKVFMYIGKYAKQLEMLSIAFAGDSDKGMMHVMNGCKNLRK 480
Query: 479 LEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDD--- 535
LEIRDSPFG+ ALL + +YETMRSLWMSSC VTL GCQ LA KMP LNVE+INE D
Sbjct: 481 LEIRDSPFGDAALLGNFARYETMRSLWMSSCNVTLKGCQVLASKMPMLNVEVINERDGSN 540
Query: 536 QMEFSLDDRQKVGKMYLYRTLVGPRKDAPDFV 567
+ME + D KV K+Y+YRT G R DAP+FV
Sbjct: 541 EMEENHGDLPKVEKLYVYRTTAGARDDAPNFV 572
>UNIPROTKB|Q7XVM8 [details] [associations]
symbol:LOC_Os04g32460 "Transport inhibitor response 1-like
protein Os04g0395600" species:39947 "Oryza sativa Japonica Group"
[GO:0000822 "inositol hexakisphosphate binding" evidence=ISS]
[GO:0009734 "auxin mediated signaling pathway" evidence=ISS]
[GO:0010011 "auxin binding" evidence=ISS] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=ISS] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 UniPathway:UPA00143 GO:GO:0005634
GO:GO:0009734 GO:GO:0016567 GO:GO:0010011 eggNOG:NOG259467
HOGENOM:HOG000239805 OMA:WLSCFPD ProtClustDB:CLSN2687785
GO:GO:0019005 GO:GO:0000822 EMBL:AP008210 EMBL:CM000141
EMBL:AL606621 EMBL:AK100862 RefSeq:NP_001052659.1 UniGene:Os.10149
EnsemblPlants:LOC_Os04g32460.1 EnsemblPlants:LOC_Os04g32460.2
GeneID:4335696 KEGG:osa:4335696 Gramene:Q7XVM8 Uniprot:Q7XVM8
Length = 575
Score = 1979 (701.7 bits), Expect = 1.4e-204, P = 1.4e-204
Identities = 375/572 (65%), Positives = 456/572 (79%)
Query: 2 MNYFPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGRF 61
M YFP+EV+EH+F F+ +Q+DRN VSLVCK WY+IERLSR+ VF+GNCYA+ RV RF
Sbjct: 1 MTYFPEEVVEHIFSFLPAQRDRNTVSLVCKVWYEIERLSRRGVFVGNCYAVRAGRVAARF 60
Query: 62 PGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELL 121
P +++LT+KGKPHFADFNL+P DWGG+ PW+EA A+ GLEELR+KRMVVSD+ LELL
Sbjct: 61 PNVRALTVKGKPHFADFNLVPPDWGGYAGPWIEAAARGCHGLEELRMKRMVVSDESLELL 120
Query: 122 SRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTS 181
+RSF F++LVL+SCEGF+TDGLAA+A++C+ LRELDLQE EV+D +W+SCFPDSCTS
Sbjct: 121 ARSFPRFRALVLISCEGFSTDGLAAVASHCKLLRELDLQENEVEDRGPRWLSCFPDSCTS 180
Query: 182 LVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGSF 241
LVSLNF+C+KGE+N +LERLV+RSPNL+SLRLNR+V +DTL K+L+R P L DLG G+
Sbjct: 181 LVSLNFACIKGEVNAGSLERLVSRSPNLRSLRLNRSVSVDTLAKILLRTPNLEDLGTGNL 240
Query: 242 VYDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGN 301
D +E+Y KL + L KCK +RSLSGF + P CLS I+P+C LT LNLSYAP + +
Sbjct: 241 TDDFQTESYFKLTSALEKCKMLRSLSGFWDASPVCLSFIYPLCAQLTGLNLSYAPTLDAS 300
Query: 302 ELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSG---VDNAAVTEEGLV 358
+L K+I C KL+RLW+LD I D+GL VVA +CK+LQELRVFPS +AVTEEGLV
Sbjct: 301 DLTKMISRCVKLQRLWVLDCISDKGLQVVASSCKDLQELRVFPSDFYVAGYSAVTEEGLV 360
Query: 359 AISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFG 418
A+S GCPKL+SLLYFC QMTNAAL+TVAKN NFTRFRLCIL+ KPD VT QPLDEGFG
Sbjct: 361 AVSLGCPKLNSLLYFCHQMTNAALVTVAKNCPNFTRFRLCILEPGKPDVVTSQPLDEGFG 420
Query: 419 AIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRK 478
AIV+ CK TD+VF+YIG YA+QLEMLSIAFAG+SDKGM++V+NGCK LRK
Sbjct: 421 AIVRECKGLQRLSISGLLTDKVFMYIGKYAKQLEMLSIAFAGDSDKGMMHVMNGCKNLRK 480
Query: 479 LEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDD--- 535
LEIRDSPFG+ ALL + +YETMRSLWMSSC VTL GCQ LA KMP LNVE+INE D
Sbjct: 481 LEIRDSPFGDAALLGNFARYETMRSLWMSSCNVTLKGCQVLASKMPMLNVEVINERDGSN 540
Query: 536 QMEFSLDDRQKVGKMYLYRTLVGPRKDAPDFV 567
+ME + D KV K+Y+YRT G R DAP+FV
Sbjct: 541 EMEENHGDLPKVEKLYVYRTTAGARDDAPNFV 572
>UNIPROTKB|B4FJG6 [details] [associations]
symbol:ZEAMMB73_540791 "Uncharacterized protein"
species:4577 "Zea mays" [GO:0000822 "inositol hexakisphosphate
binding" evidence=ISS] [GO:0009734 "auxin mediated signaling
pathway" evidence=ISS] InterPro:IPR001810 SMART:SM00256
GO:GO:0009734 HOGENOM:HOG000239805 GO:GO:0000822 EMBL:BT037254
EMBL:CM000786 RefSeq:NP_001136608.1 UniGene:Zm.97801
GeneID:100216731 KEGG:zma:100216731 Uniprot:B4FJG6
Length = 573
Score = 1873 (664.4 bits), Expect = 2.5e-193, P = 2.5e-193
Identities = 364/575 (63%), Positives = 447/575 (77%)
Query: 2 MNYFPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGRF 61
M YFP EV+EH+F F+ S DRN VSLVCK WY +ERLSR+ VF+GNCYA+ PERV+ RF
Sbjct: 1 MTYFPGEVVEHIFSFLPSHSDRNTVSLVCKLWYDVERLSRRGVFVGNCYAVLPERVVLRF 60
Query: 62 PGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELL 121
P +K+LT+KGKPHFADFNL+P DWGG+ PW+EA A+S + LEELR+KRMV+SD+ LELL
Sbjct: 61 PNVKALTVKGKPHFADFNLVPPDWGGYAGPWIEATARSCLSLEELRMKRMVISDENLELL 120
Query: 122 SRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTS 181
+R+F FK LVL+SCEGF+TDGLAAIA +C+ LRELDLQE +V+D +W+S FPDSCTS
Sbjct: 121 ARTFPKFKVLVLISCEGFSTDGLAAIANHCKLLRELDLQENDVEDRGPRWLS-FPDSCTS 179
Query: 182 LVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGSF 241
LVSLNF+C+KGE+N ALERLVA+SPNL+SLRLNR+V +DTL K+L R P L DLG G+
Sbjct: 180 LVSLNFACIKGEVNSGALERLVAKSPNLRSLRLNRSVSVDTLSKILERTPNLEDLGTGNL 239
Query: 242 VYDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGN 301
+ +E++++L + L KCK +R+LSGF + P + I+P+C LT LNLSY P + +
Sbjct: 240 TDEFQAESFVRLTSALEKCKRLRNLSGFWDASPIFVPFIYPLCHQLTGLNLSYTPTLDYS 299
Query: 302 ELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGVDNAA---VTEEGLV 358
+L K+I C KL+RLW+LD I D+GL VVA +CK+LQELRVFPS + A VTEEGLV
Sbjct: 300 DLTKMISRCVKLQRLWVLDCISDKGLQVVASSCKDLQELRVFPSEFNVAGAFTVTEEGLV 359
Query: 359 AISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFG 418
AIS+GCPKL SLLYFC QMTN AL TVAKN +F RFRLCIL+ +KPD +T QPLDEGFG
Sbjct: 360 AISSGCPKLSSLLYFCHQMTNEALTTVAKNCPSFIRFRLCILEPKKPDAMTGQPLDEGFG 419
Query: 419 AIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRK 478
AIV+ CK TD+VF+YI MYA+ LEMLSIAFAG+ DKGM+ V+NGCK LRK
Sbjct: 420 AIVRDCKGLRRLSMSGLLTDRVFMYIRMYAKYLEMLSIAFAGDGDKGMMDVMNGCKNLRK 479
Query: 479 LEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDD--- 535
LEIRDSPFG+ ALL +V KY+TMRSLWMSSC VTL GCQ LA KMP LNVEI+NE D
Sbjct: 480 LEIRDSPFGDFALLGNVAKYDTMRSLWMSSCNVTLKGCQVLASKMPMLNVEIMNELDGSS 539
Query: 536 QMEFSLDDRQKVGKMYLYRTLVGPRKDAPDFVWTL 570
+ME + + KV K+Y+YRT G R DAP+FV L
Sbjct: 540 EME-NHGNLSKVDKLYVYRTTAGVRDDAPNFVQIL 573
>TAIR|locus:2099237 [details] [associations]
symbol:TIR1 "AT3G62980" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IC;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0000151
"ubiquitin ligase complex" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0010011 "auxin binding"
evidence=IGI;IDA] [GO:0002237 "response to molecule of bacterial
origin" evidence=IEP;RCA] [GO:0000822 "inositol hexakisphosphate
binding" evidence=IDA] [GO:0009734 "auxin mediated signaling
pathway" evidence=IMP] [GO:0010152 "pollen maturation"
evidence=IGI] [GO:0048443 "stamen development" evidence=IGI;RCA]
[GO:0016036 "cellular response to phosphate starvation"
evidence=IEP] [GO:0007165 "signal transduction" evidence=RCA]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0042752 "regulation of circadian rhythm" evidence=RCA]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0010311
"lateral root formation" evidence=IMP] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 UniPathway:UPA00143 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006952 GO:GO:0009734
GO:GO:0009873 GO:GO:0048443 GO:GO:0010152 GO:GO:0007049
GO:GO:0010011 GO:GO:0010311 HOGENOM:HOG000239805 GO:GO:0019005
GO:GO:0000822 GO:GO:0002237 GO:GO:0016036 GO:GO:0004842
EMBL:AL163816 ProtClustDB:CLSN2689313 PDB:2P1N PDB:2P1O PDB:2P1Q
PDBsum:2P1N PDBsum:2P1O PDBsum:2P1Q PDB:2P1M PDB:2P1P PDB:3C6N
PDB:3C6O PDB:3C6P PDBsum:2P1M PDBsum:2P1P PDBsum:3C6N PDBsum:3C6O
PDBsum:3C6P eggNOG:NOG267823 EMBL:AF005047 EMBL:AF005048
EMBL:BT001946 EMBL:EF598824 EMBL:EF598825 EMBL:EF598826
EMBL:EF598827 EMBL:EF598828 EMBL:EF598829 EMBL:EF598830
EMBL:EF598831 EMBL:EF598832 EMBL:EF598833 EMBL:EF598834
EMBL:EF598835 EMBL:EF598836 EMBL:EF598837 EMBL:EF598838
EMBL:EF598839 EMBL:EF598840 EMBL:EF598841 EMBL:EF598842
EMBL:EF598843 EMBL:EF598844 EMBL:EF598845 EMBL:EF598846
EMBL:EF598847 EMBL:AK220790 EMBL:EU550991 EMBL:EU550992
EMBL:EU550993 EMBL:EU550994 EMBL:EU550995 EMBL:EU550996
EMBL:EU550997 EMBL:EU550998 EMBL:EU550999 EMBL:EU551000
EMBL:EU551001 EMBL:EU551002 EMBL:EU551003 EMBL:EU551004
EMBL:EU551005 EMBL:EU551006 EMBL:EU551007 EMBL:EU551008
EMBL:EU551009 EMBL:EU551010 EMBL:EU551011 EMBL:EU551012
EMBL:EU551013 EMBL:EU551014 IPI:IPI00531280 PIR:T48087
RefSeq:NP_567135.1 UniGene:At.25594 ProteinModelPortal:Q570C0
SMR:Q570C0 DIP:DIP-31740N IntAct:Q570C0 STRING:Q570C0 PaxDb:Q570C0
PRIDE:Q570C0 EnsemblPlants:AT3G62980.1 GeneID:825473
KEGG:ath:AT3G62980 GeneFarm:4958 TAIR:At3g62980 InParanoid:Q570C0
KO:K14485 OMA:PNMTRFR PhylomeDB:Q570C0 EvolutionaryTrace:Q570C0
Genevestigator:Q570C0 GermOnline:AT3G62980 Uniprot:Q570C0
Length = 594
Score = 1786 (633.8 bits), Expect = 4.1e-184, P = 4.1e-184
Identities = 342/570 (60%), Positives = 430/570 (75%)
Query: 5 FPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGRFPGL 64
FP+EV+EHVF F+ KDRN+VSLVCKSWY+IER R+ VFIGNCYA+SP VI RFP +
Sbjct: 9 FPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEIERWCRRKVFIGNCYAVSPATVIRRFPKV 68
Query: 65 KSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELLSRS 124
+S+ LKGKPHFADFNL+P WGG+VYPW+EA++ S LEE+RLKRMVV+DDCLEL+++S
Sbjct: 69 RSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKS 128
Query: 125 FVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTSLVS 184
F NFK LVL SCEGF+TDGLAAIAA CR L+ELDL+E +VDD G W+S FPD+ TSLVS
Sbjct: 129 FKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVS 188
Query: 185 LNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGSFVYD 244
LN SCL E++ +ALERLV R PNLKSL+LNRAVPL+ L LL RAPQL +LG G + +
Sbjct: 189 LNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAE 248
Query: 245 PSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELI 304
+ Y L L CK +R LSGF + VP L A++ VC LT+LNLSYA + +L+
Sbjct: 249 VRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYAT-VQSYDLV 307
Query: 305 KLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGV----DNAAVTEEGLVAI 360
KL+ C KL+RLW+LD I D GL V+A TCK+L+ELRVFPS N A+TE+GLV++
Sbjct: 308 KLLCQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSV 367
Query: 361 SAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAI 420
S GCPKL S+LYFC+QMTNAALIT+A+N N TRFRLCI++ + PD +T++PLD GFGAI
Sbjct: 368 SMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAI 427
Query: 421 VQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLE 480
V+ CK TD+VF YIG YA+++EMLS+AFAG+SD GM +VL+GC LRKLE
Sbjct: 428 VEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLE 487
Query: 481 IRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQMEFS 540
IRD PFG+ ALL + K ETMRSLWMSSC V+ G C+ L +KMP+LNVE+I+E + S
Sbjct: 488 IRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGAPD-S 546
Query: 541 LDDRQKVGKMYLYRTLVGPRKDAPDFVWTL 570
+ V ++++YRT+ GPR D P FVW +
Sbjct: 547 RPESCPVERVFIYRTVAGPRFDMPGFVWNM 576
>UNIPROTKB|B9S3W2 [details] [associations]
symbol:RCOM_0556140 "TRANSPORT INHIBITOR RESPONSE 1
protein, putative" species:3988 "Ricinus communis" [GO:0000822
"inositol hexakisphosphate binding" evidence=ISS] [GO:0009734
"auxin mediated signaling pathway" evidence=ISS] InterPro:IPR001810
SMART:SM00256 GO:GO:0009734 SUPFAM:SSF81383 GO:GO:0000822
ProtClustDB:CLSN2689313 KO:K14485 EMBL:EQ973863
RefSeq:XP_002520681.1 GeneID:8287179 KEGG:rcu:RCOM_0556140
Uniprot:B9S3W2
Length = 585
Score = 1764 (626.0 bits), Expect = 8.7e-182, P = 8.7e-182
Identities = 341/574 (59%), Positives = 433/574 (75%)
Query: 1 MMNYFPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGR 60
M + FP+EV+EHV F+ S KDRNAVS+VCKSWY+IER R+ +F+GNCYA+SP VI R
Sbjct: 5 MASSFPEEVLEHVLLFIQSDKDRNAVSMVCKSWYEIERWCRRRIFVGNCYAVSPTMVIRR 64
Query: 61 FPGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLEL 120
FP ++S+ LKGKPHFADFNL+P WGG+V+PW+ A++ + LEE+RLKRMVVSD+ LEL
Sbjct: 65 FPDVRSIELKGKPHFADFNLVPEGWGGYVFPWIVAMSSAYPWLEEIRLKRMVVSDEALEL 124
Query: 121 LSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCT 180
+S+SF NFK LVL SCEGF+T GLAAIAANCR LRELDL+E EVDD G W+S FPDS T
Sbjct: 125 ISKSFKNFKVLVLSSCEGFSTGGLAAIAANCRNLRELDLRESEVDDPSGHWLSHFPDSFT 184
Query: 181 SLVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGS 240
SLVSLN SCL E++ +AL+RLV R PNL++LRLNRAVPLD L +L RAPQLV+LG G+
Sbjct: 185 SLVSLNISCLGSEVSFSALKRLVGRCPNLRTLRLNRAVPLDRLANILRRAPQLVELGTGA 244
Query: 241 FVYDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHG 300
+ + + + L CK ++SLSGF +VVP L AI+P+C LTSLNLSYA I
Sbjct: 245 YSAELRPDVFSTLSGAFSGCKELKSLSGFWDVVPGYLPAIYPICSGLTSLNLSYAT-IQS 303
Query: 301 NELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPS---GVD-NAAVTEEG 356
+L+KL+ C+ L+RLW+LD I D GL +A CK+L+ELRVFPS G + N ++TE+G
Sbjct: 304 PDLVKLVSQCQSLQRLWVLDYIEDVGLEALATFCKDLRELRVFPSDPFGPEPNVSLTEQG 363
Query: 357 LVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEG 416
LV +S GCPKL S+LYFC+QMTN ALIT+A+N N TRFRLCI++ PD VT QPLD+G
Sbjct: 364 LVVVSEGCPKLQSVLYFCRQMTNDALITIARNRPNMTRFRLCIIEPRMPDNVTHQPLDDG 423
Query: 417 FGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKL 476
FGAIVQ CK TD+VF YIG +A++LEMLS+AFAG+SD G+ +VL+GC+ L
Sbjct: 424 FGAIVQYCKDLRRLSLSGLLTDRVFEYIGTHAKKLEMLSVAFAGDSDLGLHHVLSGCENL 483
Query: 477 RKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQ 536
RKLEIRD PFG+ ALL + K ETMRSLWMSSC V+ G C+ L +KMPRLNVE+I+E
Sbjct: 484 RKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKLLGQKMPRLNVEVIDERGP 543
Query: 537 MEFSLDDRQKVGKMYLYRTLVGPRKDAPDFVWTL 570
+ + + V K+Y+YR++ GPR D P FV+T+
Sbjct: 544 PD-TRPESCPVEKLYIYRSVAGPRFDMPGFVYTM 576
>UNIPROTKB|B9I9W7 [details] [associations]
symbol:FBL1 "F-box family protein" species:3694 "Populus
trichocarpa" [GO:0000822 "inositol hexakisphosphate binding"
evidence=ISS] [GO:0009734 "auxin mediated signaling pathway"
evidence=ISS] InterPro:IPR001810 SMART:SM00256 GO:GO:0009734
GO:GO:0048443 GO:GO:0010152 GO:GO:0010011 GO:GO:0010311
HOGENOM:HOG000239805 GO:GO:0019005 GO:GO:0000822 GO:GO:0002237
GO:GO:0016036 ProtClustDB:CLSN2689313 eggNOG:NOG267823 KO:K14485
OMA:PNMTRFR EMBL:CM000350 RefSeq:XP_002321035.1
EnsemblPlants:POPTR_0014s12930.1 GeneID:7491325
KEGG:pop:POPTR_572746 Uniprot:B9I9W7
Length = 584
Score = 1743 (618.6 bits), Expect = 1.5e-179, P = 1.5e-179
Identities = 340/572 (59%), Positives = 424/572 (74%)
Query: 3 NYFPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGRFP 62
N FP+EV++HV F+T+ KDRNAVSLVCKSWY+IER R+ +F+GNCYA+ PE VI RFP
Sbjct: 6 NSFPEEVLQHVLSFITNDKDRNAVSLVCKSWYEIERWCRKRIFVGNCYAVRPEMVIRRFP 65
Query: 63 GLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELLS 122
L+S+ LKGKPHFADF+L+P WGG VYPW+ ALA + LEE+RLKRMVVSD+ L++++
Sbjct: 66 ELRSVELKGKPHFADFSLVPDGWGGCVYPWIAALATAYPWLEEIRLKRMVVSDESLKVIA 125
Query: 123 RSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTSL 182
+SF NFK LVL SCEGF+TDGLAA+AANCR LR LDL+E EVDD GQW+S FPDS TSL
Sbjct: 126 KSFKNFKVLVLSSCEGFSTDGLAAVAANCRNLRGLDLRESEVDDPSGQWLSRFPDSFTSL 185
Query: 183 VSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGSFV 242
SLN SCL E++ +ALERLV R P+LK+LRLN AVPLD L LL APQLV+LG G++
Sbjct: 186 ASLNISCLGAEVSFSALERLVGRCPDLKTLRLNHAVPLDKLANLLRGAPQLVELGTGAYS 245
Query: 243 YDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNE 302
+ + + L CK +RSLSGF V P L A++PVC LTSLNL YA I G +
Sbjct: 246 AELQPDVFSNLAGAFSGCKELRSLSGFWNVFPGYLPAVYPVCSGLTSLNLRYA-NIQGAD 304
Query: 303 LIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPS---GVD-NAAVTEEGLV 358
LIKL+ C L+RLW+LD I D GL +A CK+L ELRVFPS G + N ++TE GLV
Sbjct: 305 LIKLVSQCPSLQRLWVLDYIEDIGLEALAACCKDLTELRVFPSDPYGAEPNVSLTERGLV 364
Query: 359 AISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFG 418
++S GCPKLHS+LYFC+QMTNAAL+T+AKN + T FRLCI++ PD T+QPLD GFG
Sbjct: 365 SVSEGCPKLHSVLYFCRQMTNAALVTIAKNRPSMTCFRLCIIEPRAPDYQTLQPLDLGFG 424
Query: 419 AIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRK 478
AIV++ K TD+VF YIG YA++LEMLS+AFAG+SD G+ +VL+GC+KL K
Sbjct: 425 AIVENYKDLRRLSLSGLLTDRVFEYIGTYAKKLEMLSVAFAGDSDLGLHHVLSGCEKLCK 484
Query: 479 LEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQME 538
LEIRD PFG+ ALL + K ETMRSLWMSSC V+ C+ L +KMPRLNVE+I+E +
Sbjct: 485 LEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSFRACKLLGQKMPRLNVEVIDERGPPD 544
Query: 539 FSLDDRQKVGKMYLYRTLVGPRKDAPDFVWTL 570
+ V K+Y+YRT+ GPR D P FVWT+
Sbjct: 545 LR-PESCPVEKLYIYRTIAGPRFDMPGFVWTM 575
>UNIPROTKB|A4KA30 [details] [associations]
symbol:TIR1 "Transport inhibitor response 1" species:3635
"Gossypium hirsutum" [GO:0000822 "inositol hexakisphosphate
binding" evidence=ISS] [GO:0009734 "auxin mediated signaling
pathway" evidence=ISS] InterPro:IPR001810 SMART:SM00256
GO:GO:0009734 GO:GO:0000822 EMBL:DQ659621 ProteinModelPortal:A4KA30
SMR:A4KA30 Uniprot:A4KA30
Length = 586
Score = 1734 (615.5 bits), Expect = 1.3e-178, P = 1.3e-178
Identities = 335/571 (58%), Positives = 428/571 (74%)
Query: 5 FPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGRFPGL 64
FPDEV+EHVF F+ S KDRNAVS+VCKSWY+IER R+ VF+GNCYA+SP VI RFP
Sbjct: 9 FPDEVLEHVFSFIQSDKDRNAVSMVCKSWYEIERWCRRKVFVGNCYAVSPRMVIRRFPEF 68
Query: 65 KSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELLSRS 124
+S+ LKGKPHFADFNL+P WGG+V+PW+ +A + LEE+RLKRMVV+D+ LEL+++S
Sbjct: 69 RSIELKGKPHFADFNLVPDGWGGYVFPWIAEMAGAYPWLEEIRLKRMVVTDESLELIAKS 128
Query: 125 FVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTSLVS 184
F NFK LVL SCEGF+TDGLAAIAA+C+ L+ELDL++ EVDD W+S FP++ TSLVS
Sbjct: 129 FKNFKVLVLSSCEGFSTDGLAAIAASCKNLKELDLRDCEVDDLSAHWLSHFPETYTSLVS 188
Query: 185 LNFSCL-KGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGSFVY 243
LN SCL E + +ALERLV R NLK+LRLNRAVPLD + +L APQLV+ G G++
Sbjct: 189 LNISCLGSDEASFSALERLVHRCTNLKTLRLNRAVPLDKIANILRHAPQLVEFGTGTYTA 248
Query: 244 DPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNEL 303
D + Y L L CK ++SLSGF +V+P L AI+PVC LTSLNLSYA I +L
Sbjct: 249 DVRPDVYSDLAGVLSSCKELKSLSGFWDVIPDYLPAIYPVCSKLTSLNLSYAT-IQSPDL 307
Query: 304 IKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPS---GVD-NAAVTEEGLVA 359
IKL+ C L+RL +LD I D GL V+A +CK+LQELRVFPS G + N ++TE+GLVA
Sbjct: 308 IKLVSHCPNLQRLLVLDYIEDSGLEVLASSCKDLQELRVFPSDPFGAEPNVSLTEQGLVA 367
Query: 360 ISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGA 419
+S GCPKL S+LYFC++M+N AL+T+A++ NFTRFRLCI++ + D +T++PLD GFGA
Sbjct: 368 VSLGCPKLQSVLYFCRRMSNEALVTIARSRPNFTRFRLCIIEPKTADYLTLEPLDVGFGA 427
Query: 420 IVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKL 479
IVQ CK TD+VF YIG YA++LEMLS+AFAG+SD G+ +VL+GC+ LRKL
Sbjct: 428 IVQYCKDLRRLSLSGLLTDRVFEYIGTYAKKLEMLSVAFAGDSDLGLHHVLSGCESLRKL 487
Query: 480 EIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQMEF 539
EIRD PFG+ ALL + K ETMRSLWMSSC V+ C+ L +KMPRLNVE+I+E +
Sbjct: 488 EIRDCPFGDKALLANAAKLETMRSLWMSSCAVSFAACKLLGQKMPRLNVEVIDERGPPD- 546
Query: 540 SLDDRQKVGKMYLYRTLVGPRKDAPDFVWTL 570
S + V K+Y+YR++ GPR D P FVWT+
Sbjct: 547 SRPENCPVDKLYIYRSIAGPRFDMPPFVWTM 577
>UNIPROTKB|A5ARV5 [details] [associations]
symbol:VITISV_038840 "Putative uncharacterized protein"
species:29760 "Vitis vinifera" [GO:0000822 "inositol
hexakisphosphate binding" evidence=ISS] [GO:0009734 "auxin mediated
signaling pathway" evidence=ISS] InterPro:IPR001810 SMART:SM00256
GO:GO:0009734 SUPFAM:SSF81383 HOGENOM:HOG000239805 GO:GO:0000822
eggNOG:KOG1947 EMBL:AM433343 ProteinModelPortal:A5ARV5 SMR:A5ARV5
Uniprot:A5ARV5
Length = 581
Score = 1729 (613.7 bits), Expect = 4.5e-178, P = 4.5e-178
Identities = 333/574 (58%), Positives = 423/574 (73%)
Query: 2 MNY-FPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGR 60
M Y FP+EV+EHV F+ S DRN+VSLVCKSW+ IER R+ +F+GNCYA+SP I R
Sbjct: 1 MGYSFPEEVLEHVLSFIDSDSDRNSVSLVCKSWHDIERWCRRRLFVGNCYAVSPAIAIRR 60
Query: 61 FPGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLEL 120
FP L+S++LKGKPHFADFNL+P++WGG+ YPW+ A AK+ LEELRLKRMVVSD+ LEL
Sbjct: 61 FPELRSVSLKGKPHFADFNLVPHEWGGYAYPWIAAFAKAYPWLEELRLKRMVVSDEALEL 120
Query: 121 LSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCT 180
+++ F NF+ LV+ SCEGF+TDGLA IAANCR L+ELDL E EVDD G W+S FPDS T
Sbjct: 121 IAKKFKNFRVLVMYSCEGFSTDGLATIAANCRNLKELDLSESEVDDVSGNWLSQFPDSYT 180
Query: 181 SLVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGS 240
SL SLN + L EI TALERLV R PNLK+L+L+ +VPLD L LL APQLV+LG G
Sbjct: 181 SLESLNITSLSSEIRFTALERLVGRCPNLKTLKLSHSVPLDLLPNLLQNAPQLVELGSGL 240
Query: 241 FVYDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHG 300
+ + Y KL CK ++ L G +VVP L ++P+C LTSLNLS AP I
Sbjct: 241 HTKEVHPDLYSKLAGAFSGCKGLKRLCGLRDVVPSYLPTLYPICFGLTSLNLSDAP-IQC 299
Query: 301 NELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPS---GVD-NAAVTEEG 356
ELIKL+ C+ L+RLW+LD I D GL +A +CK+L+ELRVFPS G + N ++TE+G
Sbjct: 300 PELIKLVSQCQNLQRLWVLDYIEDTGLNALAESCKDLRELRVFPSDPFGQEPNVSLTEQG 359
Query: 357 LVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEG 416
LV++SAGCPKLHS+LYFC++M+N AL T+A+N N TRFRLCI++R +PD +T +PLD G
Sbjct: 360 LVSVSAGCPKLHSVLYFCRRMSNVALSTIARNRPNLTRFRLCIIERFRPDYITQEPLDVG 419
Query: 417 FGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKL 476
FGAIV+ CK TD+VF YIG + ++LEMLS+AFAG+SD G+ +VL+GCK L
Sbjct: 420 FGAIVEHCKDLKRLSLSGLLTDRVFEYIGSHGKKLEMLSLAFAGDSDLGLHHVLSGCKSL 479
Query: 477 RKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQ 536
RKLEIRD PFG+ ALL + K ETMRSLWMS+C+V+ C+ L +KMPRLNVE+I E
Sbjct: 480 RKLEIRDCPFGDKALLANAAKLETMRSLWMSACQVSYRACKLLGQKMPRLNVEVIAEQGH 539
Query: 537 MEFSLDDRQKVGKMYLYRTLVGPRKDAPDFVWTL 570
+ S D+ V K+Y+YRT+ GPR D P FVWT+
Sbjct: 540 PDSSPDE-YPVEKLYIYRTVSGPRSDMPSFVWTM 572
>UNIPROTKB|Q2R3K5 [details] [associations]
symbol:LOC_Os11g31620 "Transport inhibitor response 1-like
protein Os11g0515500" species:39947 "Oryza sativa Japonica Group"
[GO:0000822 "inositol hexakisphosphate binding" evidence=ISS]
[GO:0009734 "auxin mediated signaling pathway" evidence=ISS]
[GO:0010011 "auxin binding" evidence=ISS] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=ISS] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 UniPathway:UPA00143 GO:GO:0005634
GO:GO:0009734 EMBL:DP000010 EMBL:AP008217 GO:GO:0016567
GO:GO:0010011 HOGENOM:HOG000239805 GO:GO:0019005 GO:GO:0000822
EMBL:AK072358 RefSeq:NP_001067971.2 UniGene:Os.24828
EnsemblPlants:LOC_Os11g31620.1 GeneID:4350590 KEGG:osa:4350590
Gramene:Q2R3K5 eggNOG:NOG310945 OMA:HIGDEGL Uniprot:Q2R3K5
Length = 568
Score = 1718 (609.8 bits), Expect = 6.5e-177, P = 6.5e-177
Identities = 338/572 (59%), Positives = 419/572 (73%)
Query: 2 MNYFPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGRF 61
M +FP+EV+EH+ F+ S +DRNAVSLVC+ WY++ERLSR+SV + NCYA PERV RF
Sbjct: 1 MVFFPEEVVEHILGFLASHRDRNAVSLVCREWYRVERLSRRSVLVRNCYAARPERVHARF 60
Query: 62 PGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELL 121
PGL+SL++KG+P F +P WG PWV A + GLEELRLKRMVV+D CL+LL
Sbjct: 61 PGLRSLSVKGRPRF-----VPAGWGAAARPWVAACVAACPGLEELRLKRMVVTDGCLKLL 115
Query: 122 SRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTS 181
+ SF N KSLVLV C+GF+TDGLA +A NCR+++ELDLQE V+D +W+ CFP T
Sbjct: 116 ACSFPNLKSLVLVGCQGFSTDGLATVATNCRFMKELDLQESLVEDRDSRWLGCFPKPSTL 175
Query: 182 LVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGSF 241
L SLNFSCL GE+N ALE LVARSPNL+SLRLNR+VPLD L ++L R P+LVDL GSF
Sbjct: 176 LESLNFSCLTGEVNSPALEILVARSPNLRSLRLNRSVPLDVLARILCRRPRLVDLCTGSF 235
Query: 242 VYDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGN 301
V AY L + C ++SLSGF + + I PVC+NLT LNLS AP +
Sbjct: 236 VRGNIVGAYAGLFNSFQHCSLLKSLSGFWDATSLFIPVIAPVCKNLTCLNLSSAPMVRSA 295
Query: 302 ELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGVDNAA--VTEEGLVA 359
LI+ I C+KL++LW+LD IGD GL +VA +C +LQELRVFP+ + A VTEEGLVA
Sbjct: 296 YLIEFICQCKKLQQLWVLDHIGDEGLKIVASSCIQLQELRVFPANANARASTVTEEGLVA 355
Query: 360 ISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGA 419
ISAGC KL S+LYFCQ+MTN+ALITVAKN FT FRLC+LD D VT QPLDEG+GA
Sbjct: 356 ISAGCNKLQSVLYFCQRMTNSALITVAKNCPRFTSFRLCVLDPGSADAVTGQPLDEGYGA 415
Query: 420 IVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKL 479
IVQSCK TD VFLYIGMYAE+LEMLS+AFAG++D GM YVLNGCK L+KL
Sbjct: 416 IVQSCKGLRRLCLSGLLTDTVFLYIGMYAERLEMLSVAFAGDTDDGMTYVLNGCKNLKKL 475
Query: 480 EIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQMEF 539
EIRDSPFG++ALL + +YE MRSLW+SSC VTLGGC++LA M LN+E++N +
Sbjct: 476 EIRDSPFGDSALLAGMHQYEAMRSLWLSSCNVTLGGCKSLAASMANLNIEVMNRAASINE 535
Query: 540 S--LDDRQKVGKMYLYRTLVGPRKDAPDFVWT 569
+ +D +KV K+Y+YRT+ GPR DAP+F+ T
Sbjct: 536 ADNANDAKKVKKLYIYRTVAGPRGDAPEFIST 567
>UNIPROTKB|B9IBT6 [details] [associations]
symbol:FBL2 "F-box family protein" species:3694 "Populus
trichocarpa" [GO:0000822 "inositol hexakisphosphate binding"
evidence=ISS] [GO:0009734 "auxin mediated signaling pathway"
evidence=ISS] InterPro:IPR001810 SMART:SM00256 GO:GO:0009734
GO:GO:0048443 GO:GO:0010152 GO:GO:0010011 GO:GO:0010311
HOGENOM:HOG000239805 GO:GO:0019005 GO:GO:0000822 GO:GO:0002237
GO:GO:0016036 ProtClustDB:CLSN2689313 eggNOG:NOG267823
EMBL:CM000350 RefSeq:XP_002321336.1
EnsemblPlants:POPTR_0020s00280.1 GeneID:7464454
KEGG:pop:POPTR_573509 Uniprot:B9IBT6
Length = 584
Score = 1709 (606.7 bits), Expect = 5.9e-176, P = 5.9e-176
Identities = 332/570 (58%), Positives = 421/570 (73%)
Query: 5 FPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGRFPGL 64
FP+EV+EHV F+T+ KDRNAVS+VCKSWY+IER R+ +F+GNCYA+ P+ VI RFP L
Sbjct: 8 FPEEVLEHVLSFITNDKDRNAVSVVCKSWYEIERWCRKRIFVGNCYAVRPDMVIRRFPEL 67
Query: 65 KSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELLSRS 124
+S+ LKGKPHFADFNL+P WGG+ YPW+ ALA + LEE+RLKRMV+SD+ LE +++S
Sbjct: 68 RSVELKGKPHFADFNLVPDGWGGYFYPWIAALATAYPWLEEIRLKRMVISDESLEFIAKS 127
Query: 125 FVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTSLVS 184
F NFK LVL SCEGF+TDGL+AIAA+CR LRELDL+E EVDD GQW++ FPDS TSLVS
Sbjct: 128 FKNFKVLVLSSCEGFSTDGLSAIAADCRNLRELDLRESEVDDPSGQWLNSFPDSFTSLVS 187
Query: 185 LNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGSFVYD 244
LN SCL E++ +ALERLV + P+LK+L+LN AVP++ L KL+ +APQLV+LG G F
Sbjct: 188 LNISCLGAELSFSALERLVGQCPDLKNLQLNHAVPVERLAKLIRQAPQLVELGTGEFSAK 247
Query: 245 PSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELI 304
E + L CK +RSLSGF +V P L A++PVC LTSLNL YA I +LI
Sbjct: 248 LQPEIFSNLAGAFSVCKELRSLSGFWDVNPAYLPAVYPVCSGLTSLNLRYA-NIQSADLI 306
Query: 305 KLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPS----GVDNAAVTEEGLVAI 360
KL+ C L+RLW+LD I D GL +A CK+L ELRVFPS N ++TE GLV++
Sbjct: 307 KLVSQCSNLQRLWVLDYIEDVGLEALAACCKDLTELRVFPSDPFAAEPNVSLTERGLVSV 366
Query: 361 SAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAI 420
S GCPKL S+LYFC+QMTNAAL+TVAKN + T FRLCI++ + PD T+QPLD GFGAI
Sbjct: 367 SEGCPKLQSVLYFCRQMTNAALVTVAKNRPSMTCFRLCIIEPQAPDYQTLQPLDLGFGAI 426
Query: 421 VQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLE 480
V++ K TD+VF YIG Y +++EMLS+AFAG+SD G+ +VL+GC++L KLE
Sbjct: 427 VENYKDLRRLSLSGLLTDRVFEYIGTYGKKIEMLSVAFAGDSDLGLHHVLSGCERLCKLE 486
Query: 481 IRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQMEFS 540
IRD FG+ ALL + K ETMRSLWMSSC V+ G C+ L +KMPRLNVE+I+E E S
Sbjct: 487 IRDCSFGDKALLANAAKLETMRSLWMSSCSVSFGACKLLGQKMPRLNVEVIDERGPPE-S 545
Query: 541 LDDRQKVGKMYLYRTLVGPRKDAPDFVWTL 570
+ V K+Y+YRT+ GPR D P FV T+
Sbjct: 546 RPESCPVEKLYIYRTIAGPRLDMPGFVRTM 575
>UNIPROTKB|B6UHV2 [details] [associations]
symbol:B6UHV2 "Transport inhibitor response 1 protein"
species:4577 "Zea mays" [GO:0000822 "inositol hexakisphosphate
binding" evidence=ISS] [GO:0009734 "auxin mediated signaling
pathway" evidence=ISS] InterPro:IPR001810 SMART:SM00256
GO:GO:0009734 GO:GO:0000822 UniGene:Zm.94186 EMBL:EU976817
Gramene:B6UHV2 Uniprot:B6UHV2
Length = 573
Score = 1660 (589.4 bits), Expect = 9.1e-171, P = 9.1e-171
Identities = 329/571 (57%), Positives = 405/571 (70%)
Query: 2 MNYFPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGRF 61
M YFPDEV+ ++ +VTS +DRNAVSLVC++WY IER R SV + NCYA+ PERV RF
Sbjct: 1 MAYFPDEVVGYILGYVTSHQDRNAVSLVCRAWYDIERHGRHSVLVRNCYAVCPERVHMRF 60
Query: 62 PGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELL 121
P +++L+LKGKPHFA+FNL+P WG PWV+A A++ GLEELRLK MVV+D+CL+LL
Sbjct: 61 PNMRALSLKGKPHFAEFNLVPAGWGATANPWVDACARACPGLEELRLKFMVVTDECLKLL 120
Query: 122 SRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTS 181
S SF NFKSLVLV CEGF+T GLA IA NCR+L+ELDLQ+ V QWI+CFP S TS
Sbjct: 121 SLSFTNFKSLVLVCCEGFSTTGLANIATNCRFLKELDLQKSCVKHQDHQWINCFPKSSTS 180
Query: 182 LVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGSF 241
L LNFSCL GE+N ALE LVARSPNLKSLRLN AVP D L ++L R P+L DLG GSF
Sbjct: 181 LECLNFSCLTGEVNAVALEELVARSPNLKSLRLNLAVPFDVLSRILSRTPKLEDLGTGSF 240
Query: 242 VYDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQ--NLTSLNLSYAPGIH 299
+ AY L L C S++S+SGF + + I C+ NLT LNLSYA I
Sbjct: 241 LQGNDPAAYASLCRALENCTSLKSISGFWDAPGFYVQGILSNCKIRNLTCLNLSYATLIQ 300
Query: 300 GNELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGV-DNAAVTEEGLV 358
+LI +IR C+KL LW+LD IGD GL V+F+C +LQELRV+PS V VT EGLV
Sbjct: 301 STQLIGIIRHCKKLHVLWVLDHIGDEGLKAVSFSCPDLQELRVYPSVVAPRGTVTGEGLV 360
Query: 359 AISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFG 418
A+S+ C KL +L+FC +MTN AL+T+A+ T FRLCI D VT QPLDEGFG
Sbjct: 361 ALSS-CRKLQRVLFFCDRMTNTALMTIARYCPRLTSFRLCIRKPRSADAVTGQPLDEGFG 419
Query: 419 AIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRK 478
AIV+SC+ TD VFLYIGMYAE+LEMLS+ FAG++D GM+YVLNGC+ L+K
Sbjct: 420 AIVRSCRGLRRLAMSGFLTDSVFLYIGMYAEKLEMLSVTFAGDTDDGMVYVLNGCRNLKK 479
Query: 479 LEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDD--Q 536
L I++SPFG+ ALL +YE+MRSLWMSSC++TLGGC+ LA MP +NVE+I
Sbjct: 480 LVIKESPFGDAALLAGAHRYESMRSLWMSSCQITLGGCKALAATMPNINVEVIGGASFGA 539
Query: 537 MEFSLDDRQKVGKMYLYRTLVGPRKDAPDFV 567
M+ + +KV +YLYRTL GPR D P FV
Sbjct: 540 MDGGVSGARKVDMLYLYRTLAGPRCDTPGFV 570
>UNIPROTKB|B4FYV0 [details] [associations]
symbol:B4FYV0 "Uncharacterized protein" species:4577 "Zea
mays" [GO:0000822 "inositol hexakisphosphate binding" evidence=ISS]
[GO:0009734 "auxin mediated signaling pathway" evidence=ISS]
InterPro:IPR001810 SMART:SM00256 GO:GO:0009734 HOGENOM:HOG000239805
GO:GO:0000822 OMA:HIGDEGL EMBL:BT042288 EMBL:EU957719
RefSeq:NP_001148131.1 UniGene:Zm.94186 GeneID:100281739
KEGG:zma:100281739 Gramene:B4FYV0 Uniprot:B4FYV0
Length = 573
Score = 1657 (588.4 bits), Expect = 1.9e-170, P = 1.9e-170
Identities = 329/571 (57%), Positives = 405/571 (70%)
Query: 2 MNYFPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGRF 61
M YFPDEV+ ++ +VTS +DRNAVSLVC++WY IER R SV + NCYA+ PERV RF
Sbjct: 1 MAYFPDEVVGYILGYVTSHQDRNAVSLVCRAWYDIERHGRHSVLVRNCYAVCPERVHMRF 60
Query: 62 PGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELL 121
P +++L+LKGKPHFA+FNL+P WG PWV+A A++ GLEELRLK MVV+D+CL+LL
Sbjct: 61 PNMRALSLKGKPHFAEFNLVPAGWGATANPWVDACARACPGLEELRLKFMVVTDECLKLL 120
Query: 122 SRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTS 181
S SF NFKSLVLV CEGF+T GLA IA NCR+L+ELDLQ+ V QWI+CFP S TS
Sbjct: 121 SLSFTNFKSLVLVCCEGFSTTGLANIATNCRFLKELDLQKSCVKHQDHQWINCFPKSSTS 180
Query: 182 LVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGSF 241
L LNFSCL GE+N ALE LVARSPNLKSLRLN AVP D L ++L R P+L DLG GSF
Sbjct: 181 LECLNFSCLTGEVNAVALEELVARSPNLKSLRLNLAVPFDVLSRILSRTPKLEDLGTGSF 240
Query: 242 VYDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQ--NLTSLNLSYAPGIH 299
+ AY L L C S++S+SGF + + I C+ NLT LNLSYA I
Sbjct: 241 LQGNDPAAYASLCRALENCTSLKSISGFWDAPGFYVQGILSNCKIRNLTCLNLSYATLIQ 300
Query: 300 GNELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGV-DNAAVTEEGLV 358
+LI +IR C+KL LW+LD IGD GL V+F+C +LQELRV+PS V VTEEGLV
Sbjct: 301 STQLIGIIRHCKKLHVLWVLDHIGDEGLKAVSFSCPDLQELRVYPSVVAPRGTVTEEGLV 360
Query: 359 AISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFG 418
A+S+ C KL +L+ C +MTN AL+T+A+ T FRLCI D VT QPLDEGFG
Sbjct: 361 ALSS-CRKLQHVLFSCVRMTNTALMTIARYCPRLTSFRLCIRKPRSADAVTGQPLDEGFG 419
Query: 419 AIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRK 478
AIV+SC+ TD VFLYIGMYAE+LEMLS+ FAG++D GM+YVLNGC+ L+K
Sbjct: 420 AIVRSCRGLRRLAMSGLLTDSVFLYIGMYAEKLEMLSVTFAGDTDDGMVYVLNGCRNLKK 479
Query: 479 LEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDD--Q 536
L I++SPFG+ ALL +YE+MRSLWMSSC++TLGGC+ LA MP +NVE+I
Sbjct: 480 LVIKESPFGDAALLAGAHRYESMRSLWMSSCQITLGGCKALAATMPNINVEVIGGASFGA 539
Query: 537 MEFSLDDRQKVGKMYLYRTLVGPRKDAPDFV 567
M+ + +KV +YLYRTL GPR D P FV
Sbjct: 540 MDGGVSGARKVDMLYLYRTLAGPRCDTPGFV 570
>TAIR|locus:2125527 [details] [associations]
symbol:GRH1 "AT4G03190" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0045014 "negative
regulation of transcription by glucose" evidence=TAS] [GO:0010011
"auxin binding" evidence=IGI] [GO:0009733 "response to auxin
stimulus" evidence=IMP] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IPI] [GO:0048589 "developmental growth"
evidence=IGI] [GO:0002237 "response to molecule of bacterial
origin" evidence=IEP;RCA] [GO:0010152 "pollen maturation"
evidence=IGI] [GO:0048443 "stamen development" evidence=IGI;RCA]
[GO:0000271 "polysaccharide biosynthetic process" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009825
"multidimensional cell growth" evidence=RCA] [GO:0009932 "cell tip
growth" evidence=RCA] [GO:0010103 "stomatal complex morphogenesis"
evidence=RCA] [GO:0010817 "regulation of hormone levels"
evidence=RCA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=RCA] [GO:0048767 "root hair
elongation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256
UniPathway:UPA00143 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006952 GO:GO:0009734 GO:GO:0048443 GO:GO:0010152
GO:GO:0010011 HOGENOM:HOG000239805 GO:GO:0000822 GO:GO:0002237
GO:GO:0004842 GO:GO:0045014 EMBL:AL161496 EMBL:AC005275
GO:GO:0043224 EMBL:AF291816 EMBL:AY045799 EMBL:AY150427
IPI:IPI00536129 PIR:E85040 RefSeq:NP_567255.1 UniGene:At.24291
UniGene:At.69891 ProteinModelPortal:Q9ZR12 SMR:Q9ZR12
DIP:DIP-34607N IntAct:Q9ZR12 STRING:Q9ZR12 PaxDb:Q9ZR12
PRIDE:Q9ZR12 EnsemblPlants:AT4G03190.1 GeneID:828045
KEGG:ath:AT4G03190 TAIR:At4g03190 eggNOG:NOG324137
InParanoid:Q9ZR12 OMA:RECIVED PhylomeDB:Q9ZR12
ProtClustDB:CLSN2689313 Genevestigator:Q9ZR12 Uniprot:Q9ZR12
Length = 585
Score = 1626 (577.4 bits), Expect = 3.7e-167, P = 3.7e-167
Identities = 313/570 (54%), Positives = 412/570 (72%)
Query: 5 FPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGRFPGL 64
FP +V+EH+ F+ S +DRN+VSLVCKSW++ ER +R+ VF+GNCYA+SP V RFP +
Sbjct: 5 FPPKVLEHILSFIDSNEDRNSVSLVCKSWFETERKTRKRVFVGNCYAVSPAAVTRRFPEM 64
Query: 65 KSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELLSRS 124
+SLTLKGKPHFAD+NL+P WGG+ +PW+EA+A LEE+R+KRMVV+D+CLE ++ S
Sbjct: 65 RSLTLKGKPHFADYNLVPDGWGGYAWPWIEAMAAKSSSLEEIRMKRMVVTDECLEKIAAS 124
Query: 125 FVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTSLVS 184
F +FK LVL SCEGF+TDG+AAIAA CR LR L+L+E V+D G W+S FP+S TSLVS
Sbjct: 125 FKDFKVLVLTSCEGFSTDGIAAIAATCRNLRVLELRECIVEDLGGDWLSYFPESSTSLVS 184
Query: 185 LNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGSFVYD 244
L+FSCL E+ ++ LERLV+RSPNLKSL+LN AV LD L LL APQL +LG GSF
Sbjct: 185 LDFSCLDSEVKISDLERLVSRSPNLKSLKLNPAVTLDGLVSLLRCAPQLTELGTGSFAAQ 244
Query: 245 PSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELI 304
EA+ KL CK ++SLSG +V+P L A++ VC LTSLNLSYA + +L+
Sbjct: 245 LKPEAFSKLSEAFSNCKQLQSLSGLWDVLPEYLPALYSVCPGLTSLNLSYAT-VRMPDLV 303
Query: 305 KLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGVD----NAAVTEEGLVAI 360
+L+R C KL++LW++D I D+GL VA CKEL+ELRVFPS D N +TE+GLV +
Sbjct: 304 ELLRRCSKLQKLWVMDLIEDKGLEAVASYCKELRELRVFPSEPDLDATNIPLTEQGLVFV 363
Query: 361 SAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAI 420
S GC KL S+LYFC Q TNAAL T+A+ N FRLC+++ PD T +PLD+GF AI
Sbjct: 364 SKGCRKLESVLYFCVQFTNAALFTIARKRPNLKCFRLCVIEPFAPDYKTNEPLDKGFKAI 423
Query: 421 VQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLE 480
+ C+ +D+ F YIG +A+++ MLSIAFAG+SD + ++L+GC+ L+KLE
Sbjct: 424 AEGCRDLRRLSVSGLLSDKAFKYIGKHAKKVRMLSIAFAGDSDLMLHHLLSGCESLKKLE 483
Query: 481 IRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQMEFS 540
IRD PFG+TALL K ETMRSLWMSSC V+ G C+ L++KMPRLNVE+I D+ S
Sbjct: 484 IRDCPFGDTALLEHAAKLETMRSLWMSSCFVSFGACKLLSQKMPRLNVEVI--DEHPPES 541
Query: 541 LDDRQKVGKMYLYRTLVGPRKDAPDFVWTL 570
+ V ++Y+YRT+ GPR D P+FVWT+
Sbjct: 542 RPESSPVERIYIYRTVAGPRMDTPEFVWTI 571
>UNIPROTKB|B0LXW5 [details] [associations]
symbol:TIR1 "Transport inhibitor response 1" species:39946
"Oryza sativa Indica Group" [GO:0000822 "inositol hexakisphosphate
binding" evidence=ISS] [GO:0009734 "auxin mediated signaling
pathway" evidence=ISS] InterPro:IPR001810 GO:GO:0009734
SUPFAM:SSF81383 GO:GO:0048443 GO:GO:0010152 GO:GO:0010011
GO:GO:0010311 GO:GO:0048589 HOGENOM:HOG000239805 GO:GO:0000822
GO:GO:0002237 GO:GO:0016036 EMBL:CM000130 GO:GO:0043224
eggNOG:NOG267823 EMBL:EU400583 SMR:B0LXW5 Uniprot:B0LXW5
Length = 587
Score = 1604 (569.7 bits), Expect = 7.9e-165, P = 7.9e-165
Identities = 317/562 (56%), Positives = 398/562 (70%)
Query: 6 PDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGRFPGLK 65
PDEV EH F F+ + DR A + C SW + ER SR+ + + NCYA +P + RFP ++
Sbjct: 21 PDEVWEHAFSFLPAAADRGAAAGACSSWLRAERRSRRRLAVANCYAAAPRDAVERFPSVR 80
Query: 66 SLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELLSRSF 125
+ +KGKPHFADF L+P WG PW+ A A LEEL KRMVV+D+CLE+++ SF
Sbjct: 81 AAEVKGKPHFADFGLVPPAWGAAAAPWIAAAADGWPLLEELSFKRMVVTDECLEMIAASF 140
Query: 126 VNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTSLVSL 185
NF+ L LVSC+GF+T GLAAIAA CR+LRELDLQE E++D W+S FP+S TSLV+L
Sbjct: 141 RNFQVLRLVSCDGFSTAGLAAIAAGCRHLRELDLQENEIEDCSIHWLSLFPESFTSLVTL 200
Query: 186 NFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGSFVYDP 245
NFSCL+GE+N+T LERLV R NLK+L+LN A+PLD L LL +APQLV+LG G F D
Sbjct: 201 NFSCLEGEVNITVLERLVTRCHNLKTLKLNNAIPLDKLASLLHKAPQLVELGTGKFSADY 260
Query: 246 SSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIK 305
S+ + KL+A CKS+R LSG + VP L A + VC+ LTSLNLSYA + G ELIK
Sbjct: 261 HSDLFAKLEAAFGGCKSLRRLSGAWDAVPDYLPAFYCVCEGLTSLNLSYAT-VRGPELIK 319
Query: 306 LIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGVDNAA-VTEEGLVAISAGC 364
I CR L++LW++D I D GL VVA +C +LQELRVFPS A +TE GLV +SA C
Sbjct: 320 FISRCRNLQQLWVMDLIEDHGLAVVASSCNKLQELRVFPSDPFGAGFLTERGLVDVSASC 379
Query: 365 PKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSC 424
P L S+LYFC++MTN ALIT+AKN NFT FRLCIL+ PD +T +PLD GF AIV+SC
Sbjct: 380 PMLESVLYFCRRMTNEALITIAKNRPNFTCFRLCILEPHTPDYITREPLDAGFSAIVESC 439
Query: 425 KXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLEIRDS 484
+ TD VF IG +A++LEMLSIAFAGNSD G+ Y+L+GCK L+KLEIRD
Sbjct: 440 RGLRRLSISGLLTDLVFKSIGAHADRLEMLSIAFAGNSDLGLHYILSGCKSLKKLEIRDC 499
Query: 485 PFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQM--EFSLD 542
PFG+ LL + K ETMRSLWMSSC +TLG C+ LA+KMPRL+VEI+N+ + SL
Sbjct: 500 PFGDKPLLANAAKLETMRSLWMSSCLLTLGACRQLARKMPRLSVEIMNDPGRSCPLDSLP 559
Query: 543 DRQKVGKMYLYRTLVGPRKDAP 564
D V K+Y+YRT+ GPR D P
Sbjct: 560 DETPVEKLYVYRTIAGPRSDTP 581
>UNIPROTKB|Q0DKP3 [details] [associations]
symbol:LOC_Os05g05800 "Transport inhibitor response 1-like
protein Os05g0150500" species:39947 "Oryza sativa Japonica Group"
[GO:0000822 "inositol hexakisphosphate binding" evidence=ISS]
[GO:0009734 "auxin mediated signaling pathway" evidence=ISS]
[GO:0010011 "auxin binding" evidence=ISS] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=ISS] InterPro:IPR001810
PROSITE:PS50181 UniPathway:UPA00143 GO:GO:0009734 SUPFAM:SSF81383
GO:GO:0048443 GO:GO:0010152 GO:GO:0016567 EMBL:AP008211
GO:GO:0010011 GO:GO:0010311 GO:GO:0048589 HOGENOM:HOG000239805
GO:GO:0019005 GO:GO:0000822 GO:GO:0002237 GO:GO:0016036
EMBL:CM000142 GO:GO:0043224 EMBL:AC084218 RefSeq:NP_001054666.2
UniGene:Os.59244 ProteinModelPortal:Q0DKP3 SMR:Q0DKP3
GeneID:4337827 KEGG:osa:4337827 Gramene:Q0DKP3 eggNOG:NOG267823
ProtClustDB:CLSN2695374 Uniprot:Q0DKP3
Length = 587
Score = 1604 (569.7 bits), Expect = 7.9e-165, P = 7.9e-165
Identities = 317/562 (56%), Positives = 398/562 (70%)
Query: 6 PDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGRFPGLK 65
PDEV EH F F+ + DR A + C SW + ER SR+ + + NCYA +P + RFP ++
Sbjct: 21 PDEVWEHAFSFLPAAADRGAAAGACSSWLRAERRSRRRLAVANCYAAAPRDAVERFPSVR 80
Query: 66 SLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELLSRSF 125
+ +KGKPHFADF L+P WG PW+ A A LEEL KRMVV+D+CLE+++ SF
Sbjct: 81 AAEVKGKPHFADFGLVPPAWGAAAAPWIAAAADGWPLLEELSFKRMVVTDECLEMIAASF 140
Query: 126 VNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTSLVSL 185
NF+ L LVSC+GF+T GLAAIAA CR+LRELDLQE E++D W+S FP+S TSLV+L
Sbjct: 141 RNFQVLRLVSCDGFSTAGLAAIAAGCRHLRELDLQENEIEDCSIHWLSLFPESFTSLVTL 200
Query: 186 NFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGSFVYDP 245
NFSCL+GE+N+T LERLV R NLK+L+LN A+PLD L LL +APQLV+LG G F D
Sbjct: 201 NFSCLEGEVNITVLERLVTRCHNLKTLKLNNAIPLDKLASLLHKAPQLVELGTGKFSADY 260
Query: 246 SSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIK 305
S+ + KL+A CKS+R LSG + VP L A + VC+ LTSLNLSYA + G ELIK
Sbjct: 261 HSDLFAKLEAAFGGCKSLRRLSGAWDAVPDYLPAFYCVCEGLTSLNLSYAT-VRGPELIK 319
Query: 306 LIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGVDNAA-VTEEGLVAISAGC 364
I CR L++LW++D I D GL VVA +C +LQELRVFPS A +TE GLV +SA C
Sbjct: 320 FISRCRNLQQLWVMDLIEDHGLAVVASSCNKLQELRVFPSDPFGAGFLTERGLVDVSASC 379
Query: 365 PKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSC 424
P L S+LYFC++MTN ALIT+AKN NFT FRLCIL+ PD +T +PLD GF AIV+SC
Sbjct: 380 PMLESVLYFCRRMTNEALITIAKNRPNFTCFRLCILEPHTPDYITREPLDAGFSAIVESC 439
Query: 425 KXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLEIRDS 484
+ TD VF IG +A++LEMLSIAFAGNSD G+ Y+L+GCK L+KLEIRD
Sbjct: 440 RGLRRLSISGLLTDLVFKSIGAHADRLEMLSIAFAGNSDLGLHYILSGCKSLKKLEIRDC 499
Query: 485 PFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQM--EFSLD 542
PFG+ LL + K ETMRSLWMSSC +TLG C+ LA+KMPRL+VEI+N+ + SL
Sbjct: 500 PFGDKPLLANAAKLETMRSLWMSSCLLTLGACRQLARKMPRLSVEIMNDPGRSCPLDSLP 559
Query: 543 DRQKVGKMYLYRTLVGPRKDAP 564
D V K+Y+YRT+ GPR D P
Sbjct: 560 DETPVEKLYVYRTIAGPRSDTP 581
>UNIPROTKB|B9H216 [details] [associations]
symbol:FBL5 "F-box family protein" species:3694 "Populus
trichocarpa" [GO:0000822 "inositol hexakisphosphate binding"
evidence=ISS] [GO:0009734 "auxin mediated signaling pathway"
evidence=ISS] InterPro:IPR001810 SMART:SM00256 GO:GO:0009734
eggNOG:NOG259467 HOGENOM:HOG000239805 GO:GO:0000822 EMBL:CM000340
RefSeq:XP_002305651.1 EnsemblPlants:POPTR_0004s03400.1
GeneID:7494337 KEGG:pop:POPTR_800382 OMA:PFPDEVL
ProtClustDB:CLSN2715764 Uniprot:B9H216
Length = 579
Score = 1560 (554.2 bits), Expect = 3.6e-160, P = 3.6e-160
Identities = 305/570 (53%), Positives = 402/570 (70%)
Query: 5 FPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGRFPGL 64
FPDEV+E V + S KDR+AVSLVCK WY E SR VFIGNCY++SPE V RFP +
Sbjct: 14 FPDEVLERVLSLLKSHKDRSAVSLVCKDWYNAESWSRTHVFIGNCYSVSPEIVARRFPII 73
Query: 65 KSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELLSRS 124
KS+TLKGKP F+DFNL+P +WG V+PW+ A LEELRLKRM VSD+ LE L+ +
Sbjct: 74 KSVTLKGKPRFSDFNLVPENWGADVHPWLVVFATKYPFLEELRLKRMAVSDESLEFLAVN 133
Query: 125 FVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTSLVS 184
F NFK L L+SC+GF+TDGLAAIA +C+ L +LD+QE +DD G W+SCFP++ TSL
Sbjct: 134 FPNFKVLSLLSCDGFSTDGLAAIATHCKSLTQLDIQENGIDDKSGGWLSCFPENFTSLEV 193
Query: 185 LNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGSFVYD 244
LNF+ L ++N ALERLV+R +LK L++N+++ L+ LQ+LL+ APQL +LG GSF +
Sbjct: 194 LNFANLNTDVNFDALERLVSRCKSLKVLKVNKSISLEHLQRLLVCAPQLTELGTGSFTPE 253
Query: 245 PSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELI 304
++ Y +L++ +CK++ +LSG E L ++PVC NLT LNLSY + EL
Sbjct: 254 LTTRQYAELESAFNQCKNLHTLSGLWEATALYLPVLYPVCSNLTFLNLSYT-FLQSLELA 312
Query: 305 KLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSG-VDNA---AVTEEGLVAI 360
L+R C +L RLW+LD++GD+GL V C L+ELRVFP+ D VTE G VA+
Sbjct: 313 SLLRQCPRLRRLWVLDTVGDKGLEAVGSNCPLLEELRVFPADPFDEEIIHGVTEAGFVAV 372
Query: 361 SAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAI 420
S GC +LH +LYFC+QMTNAA+ T+ +N +FT FRLCI++ +PD +T +P+DE FGA+
Sbjct: 373 SYGCRRLHYVLYFCRQMTNAAVATIVQNCPDFTHFRLCIMNPGQPDYLTNEPMDEAFGAV 432
Query: 421 VQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLE 480
V++C TD F YIG YA+ LE LS+AFAG+SD+GM VL GC KLRKLE
Sbjct: 433 VRTCTKLQRLSVSGLLTDLTFEYIGQYAKNLETLSVAFAGSSDRGMQCVLEGCPKLRKLE 492
Query: 481 IRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQMEFS 540
IRD PFGN ALL+ + KYE+MRSLWMS+C VT+ GC+ LA++MPRLNVE++ ED
Sbjct: 493 IRDCPFGNAALLSGLEKYESMRSLWMSACNVTMNGCRLLAREMPRLNVEVMKEDGS---- 548
Query: 541 LDDRQKVGKMYLYRTLVGPRKDAPDFVWTL 570
DD Q K+Y+YR++ GPR+DAP V TL
Sbjct: 549 -DDSQ-ADKVYVYRSVAGPRRDAPPCVLTL 576
>UNIPROTKB|B9HZ12 [details] [associations]
symbol:FBL6 "F-box family protein" species:3694 "Populus
trichocarpa" [GO:0000822 "inositol hexakisphosphate binding"
evidence=ISS] [GO:0009734 "auxin mediated signaling pathway"
evidence=ISS] InterPro:IPR001810 SMART:SM00256 GO:GO:0009734
eggNOG:NOG259467 HOGENOM:HOG000239805 GO:GO:0000822
ProtClustDB:CLSN2715764 EMBL:CM000347 RefSeq:XP_002316664.1
EnsemblPlants:POPTR_0011s04200.1 GeneID:7485598
KEGG:pop:POPTR_568304 Uniprot:B9HZ12
Length = 579
Score = 1537 (546.1 bits), Expect = 9.9e-158, P = 9.9e-158
Identities = 302/570 (52%), Positives = 400/570 (70%)
Query: 5 FPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGRFPGL 64
FPDEV+E V + S KDR+AVSLVCK WY E SR VFIGNCY++SPE V RFP +
Sbjct: 14 FPDEVLERVLSLLKSHKDRSAVSLVCKDWYNAESWSRTHVFIGNCYSVSPEIVARRFPRI 73
Query: 65 KSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELLSRS 124
KS+TLKGKP F+DFNL+P +WG V+PW A LEELRLKRM VSD+ LE L+ +
Sbjct: 74 KSVTLKGKPRFSDFNLVPENWGADVHPWFVVFAAKYPFLEELRLKRMAVSDESLEFLALN 133
Query: 125 FVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTSLVS 184
F NFK L L+SC+GF+TDGLAAIA +C+ L +LD+QE +DD G W+SCFP++ TSL
Sbjct: 134 FPNFKVLSLLSCDGFSTDGLAAIATHCKNLTQLDVQENGIDDKSGNWLSCFPENFTSLEV 193
Query: 185 LNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGSFVYD 244
LNF+ L ++N ALERLV+R +LK L+ N+++ L+ LQ+LL+ APQL +LG GSF+ +
Sbjct: 194 LNFANLNTDVNFDALERLVSRCKSLKVLKANKSISLEHLQRLLVCAPQLTELGTGSFMPE 253
Query: 245 PSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELI 304
++ Y +L ++ + K++ +LSG E L ++P C NLT LNLSYA + EL
Sbjct: 254 LTARQYAELGSSFNQLKNLNTLSGLWEATAPYLPVLYPACTNLTFLNLSYA-FLQSIELA 312
Query: 305 KLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSG-VDNAA---VTEEGLVAI 360
L+ C +L RLW+LD++GD+GL V C L+ELRVFP+ D VTE G +A+
Sbjct: 313 SLLCQCPRLRRLWVLDTVGDKGLEAVGSNCPLLEELRVFPADPFDEEVIHGVTEAGFLAV 372
Query: 361 SAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAI 420
S GC +LH +LYFC+QMTNAA+ T+ +N +FT FRLCI++ +PD +T +P+DE FGA+
Sbjct: 373 SYGCRRLHYVLYFCRQMTNAAVATIVQNCPDFTHFRLCIMNPGQPDYLTNEPMDEAFGAV 432
Query: 421 VQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLE 480
V++C TD F YIG YA+ LE LS+AFAG+SD+GM +L GC KLRKLE
Sbjct: 433 VRTCTKLQRLSVSGLLTDLTFEYIGQYAKNLETLSVAFAGSSDRGMQCMLEGCPKLRKLE 492
Query: 481 IRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQMEFS 540
IRD PFGN ALL+ + KYE+MRSLWMS+C VT+ GC+ LA++MPRLNVE++ ED
Sbjct: 493 IRDCPFGNAALLSGLEKYESMRSLWMSACNVTMNGCRVLAREMPRLNVEVMKEDGS---- 548
Query: 541 LDDRQKVGKMYLYRTLVGPRKDAPDFVWTL 570
DD Q K+Y+YR++VGPR+DAP V TL
Sbjct: 549 -DDSQ-ADKVYVYRSVVGPRRDAPPCVLTL 576
>UNIPROTKB|B9SFB7 [details] [associations]
symbol:RCOM_1095990 "TRANSPORT INHIBITOR RESPONSE 1
protein, putative" species:3988 "Ricinus communis" [GO:0000822
"inositol hexakisphosphate binding" evidence=ISS] [GO:0009734
"auxin mediated signaling pathway" evidence=ISS] InterPro:IPR001810
SMART:SM00256 GO:GO:0009734 GO:GO:0000822 ProtClustDB:CLSN2715764
EMBL:EQ973944 RefSeq:XP_002524686.1 GeneID:8275363
KEGG:rcu:RCOM_1095990 Uniprot:B9SFB7
Length = 589
Score = 1535 (545.4 bits), Expect = 1.6e-157, P = 1.6e-157
Identities = 302/570 (52%), Positives = 394/570 (69%)
Query: 5 FPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGRFPGL 64
FPDEV+E V + S KDR++VSLVCK WY ER SR VFIGNCY++SPE V RFP +
Sbjct: 24 FPDEVLERVLGLLKSNKDRSSVSLVCKDWYNAERWSRTHVFIGNCYSVSPEIVARRFPKI 83
Query: 65 KSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELLSRS 124
+S+TLKGKP F+DFNL+P +WG + W+ A LEELRLKRM V+D+ LE LS +
Sbjct: 84 RSVTLKGKPRFSDFNLVPRNWGADIQSWLVVFASKYPFLEELRLKRMTVNDESLEFLSLN 143
Query: 125 FVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTSLVS 184
F NFK+L L+SC+GF+TDGLAAIA +C+ L ELD+QE +DD G W++CFP + TSL
Sbjct: 144 FPNFKALSLLSCDGFSTDGLAAIATHCKNLTELDIQENGIDDKSGSWLNCFPGNFTSLEV 203
Query: 185 LNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGSFVYD 244
LNF+ L E+N ALERLV+RS +LK L++N+ + L+ LQ+LL PQL +LG GSF +
Sbjct: 204 LNFANLNSEVNFDALERLVSRSKSLKVLKVNKNISLEQLQRLLACTPQLTELGTGSFSQE 263
Query: 245 PSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELI 304
++ + +++ T CK++ +LSG E + L ++P C NLT LNLSYA + EL
Sbjct: 264 LTARQFTEVENTFSHCKNLDTLSGLWEAMAPYLPVLYPACTNLTFLNLSYA-ALQSLELA 322
Query: 305 KLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGVDNA----AVTEEGLVAI 360
L+R C +L RLW+LD+I D+GL V C L+ELRVFP+ VTE G VA+
Sbjct: 323 NLLRHCPQLRRLWVLDTIEDKGLESVGSNCPLLEELRVFPADPFEEEIIHGVTEAGFVAV 382
Query: 361 SAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAI 420
S GC +LH +LYFC+QMTNAA+ T+ +N NFT FRLCI++ +PD T +P+DE FGA+
Sbjct: 383 SYGCRRLHYVLYFCRQMTNAAVATIVQNCPNFTHFRLCIMNPRQPDYTTNKPMDEAFGAV 442
Query: 421 VQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLE 480
V++C TD F YIG YA+ LE LS+AFAG+SD GM VL GC KLRKLE
Sbjct: 443 VKTCTKLQRLSVSGLLTDLTFEYIGRYAKNLETLSVAFAGSSDWGMQCVLGGCPKLRKLE 502
Query: 481 IRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQMEFS 540
IRD PFGN ALL+ + KYE+MRSLWMSSC VT+ GC+ LA++MPRLNVE++ ED
Sbjct: 503 IRDCPFGNAALLSGLEKYESMRSLWMSSCNVTMNGCRLLAREMPRLNVEVMKEDGS---- 558
Query: 541 LDDRQKVGKMYLYRTLVGPRKDAPDFVWTL 570
DD Q K+Y+YR++ GPR+DAP V L
Sbjct: 559 -DDSQ-ADKVYVYRSVAGPRRDAPSTVLNL 586
>UNIPROTKB|B9H6Y0 [details] [associations]
symbol:FBL8 "F-box family protein" species:3694 "Populus
trichocarpa" [GO:0000822 "inositol hexakisphosphate binding"
evidence=ISS] [GO:0009734 "auxin mediated signaling pathway"
evidence=ISS] GO:GO:0009734 HOGENOM:HOG000239805 GO:GO:0000822
ProtClustDB:CLSN2689967 eggNOG:NOG306499 OMA:EVDWISC EMBL:CM000341
RefSeq:XP_002306554.1 UniGene:Pth.11533
EnsemblPlants:POPTR_0005s17580.1 GeneID:7486562
KEGG:pop:POPTR_831460 Uniprot:B9H6Y0
Length = 635
Score = 1486 (528.2 bits), Expect = 2.5e-152, P = 2.5e-152
Identities = 303/577 (52%), Positives = 397/577 (68%)
Query: 5 FPDEVIEHVFD----FVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGR 60
+PD+V+E+V + F+TS+KDRNA SLVC+SWY++E L+R +FIGNCYA+SP+R + R
Sbjct: 65 YPDQVLENVLENVLWFLTSRKDRNAASLVCRSWYRVEALTRSDLFIGNCYAVSPKRAMSR 124
Query: 61 FPGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLEL 120
F ++S+TLKGKP FADFNL+P +WG PWV A+A + LE++ LKRM V+DD L L
Sbjct: 125 FTRIRSVTLKGKPRFADFNLMPPNWGAHFAPWVSAMAMTYPWLEKVHLKRMSVTDDDLAL 184
Query: 121 LSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCT 180
L+ SF FK LVLV C+GF T GLA + + CR L+ LDL E EV D+ WISCFPD+ T
Sbjct: 185 LAESFSGFKELVLVCCDGFGTSGLAIVVSRCRQLKVLDLIESEVSDDEVDWISCFPDTET 244
Query: 181 SLVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGS 240
L SL F C+ I+ ALERLVARSP+LK LRLNR V + L +L++RAP L LG GS
Sbjct: 245 CLESLIFDCVDCPIDFDALERLVARSPSLKKLRLNRYVSIGQLYRLMVRAPHLTHLGTGS 304
Query: 241 FVYDPSSE-AYIK----LKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYA 295
F PS + A ++ + CKS+ LSGF E++P L AI+PVC NLTSLN SYA
Sbjct: 305 F--SPSEDVAQVEQGPDYASAFAACKSLVCLSGFRELIPDYLPAINPVCANLTSLNFSYA 362
Query: 296 PGIHGNELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGVD-----NA 350
+ +L +I C KL+ W+LDSI D GL VA TCKEL+ELRVFP VD
Sbjct: 363 E-VSAEQLKPIISNCHKLQIFWVLDSICDEGLQAVAATCKELRELRVFP--VDPREDIEG 419
Query: 351 AVTEEGLVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTM 410
V+E GL AIS GC KL S+LYFC +MTNAA++ ++KN + FRLCI+ R +PD VT
Sbjct: 420 PVSEVGLQAISEGCRKLQSILYFCHRMTNAAVVAMSKNCPDLVVFRLCIMGRHQPDHVTG 479
Query: 411 QPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVL 470
+P+DEGFGAIV++CK TD+ F YIG Y + + LS+AFAG+SD G+ YVL
Sbjct: 480 EPMDEGFGAIVKNCKKLTRLAVSGLLTDRAFAYIGKYGKIVRTLSVAFAGDSDMGLKYVL 539
Query: 471 NGCKKLRKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEI 530
GC +L+KLEIRDSPFG+ ALL+ + Y MR LWMS+C+++ GCQ +A+ +PRL VE+
Sbjct: 540 EGCPRLQKLEIRDSPFGDAALLSGLHHYYNMRFLWMSACKLSRQGCQQIAQALPRLVVEV 599
Query: 531 INEDDQMEFSLDDRQKVGKMYLYRTLVGPRKDAPDFV 567
I +D ++ +D+ V +Y+YR+L GPR DAP FV
Sbjct: 600 IKHEDNVD--VDEY--VDTLYMYRSLEGPRDDAPIFV 632
>UNIPROTKB|B9RJT7 [details] [associations]
symbol:RCOM_1038590 "TRANSPORT INHIBITOR RESPONSE 1
protein, putative" species:3988 "Ricinus communis" [GO:0000822
"inositol hexakisphosphate binding" evidence=ISS] [GO:0009734
"auxin mediated signaling pathway" evidence=ISS] GO:GO:0009734
GO:GO:0000822 ProtClustDB:CLSN2689967 EMBL:EQ973783
RefSeq:XP_002514006.1 GeneID:8268380 KEGG:rcu:RCOM_1038590
Uniprot:B9RJT7
Length = 635
Score = 1486 (528.2 bits), Expect = 2.5e-152, P = 2.5e-152
Identities = 306/576 (53%), Positives = 390/576 (67%)
Query: 5 FPDEVIEHVFD----FVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGR 60
+PD+V+E+V + F+TS++DRNA SLVCKSWY++E L+R +FIGNCYA+S R R
Sbjct: 64 YPDQVLENVLENVLCFLTSRRDRNAASLVCKSWYRVEALTRSELFIGNCYAVSTRRATCR 123
Query: 61 FPGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLEL 120
F +KS+TLKGKP FADFNL+P +WG PWV + K+ LE++ LKRM V+DD L L
Sbjct: 124 FTRIKSVTLKGKPRFADFNLMPPNWGAHFAPWVTTMGKAYPWLEKVHLKRMTVTDDDLAL 183
Query: 121 LSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCT 180
L+ SF FK LVLV C+GF T GLA +A+ CR LR LDL E EV D+ WISCFP+S
Sbjct: 184 LAESFSGFKELVLVCCDGFGTSGLAIVASRCRQLRVLDLIESEVADDEVDWISCFPESEM 243
Query: 181 SLVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGS 240
L SL F C++ IN ALERLVARSP+LK +RLNR V + L +L++RAPQL LG GS
Sbjct: 244 CLESLIFDCVECSINFDALERLVARSPSLKKIRLNRYVSVSQLYRLMIRAPQLTHLGTGS 303
Query: 241 FVYDPSSEAYIK------LKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSY 294
F PS +A + + CKS+ LSGF E++ L AI+PVC NL SLNLSY
Sbjct: 304 F--RPSDDAAAQGEQEPDYASAFAACKSLVCLSGFKEILSDYLPAIYPVCANLNSLNLSY 361
Query: 295 APGIHGNELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGV--DNAA- 351
A I ++L +I C KL+ W+LDSI D GL VA TCKEL+ELRVFP D+
Sbjct: 362 A-NITADQLKPIISNCHKLQTFWVLDSICDEGLQAVAATCKELRELRVFPIDAREDSEGP 420
Query: 352 VTEEGLVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQ 411
V+E GL AIS GC KL S+LYFCQ MTNAA+I ++KN + FRLCI+ R +PD VT +
Sbjct: 421 VSEVGLQAISEGCRKLQSILYFCQHMTNAAVIAMSKNCPDLVVFRLCIMGRHRPDRVTGE 480
Query: 412 PLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLN 471
P+DEGFGAIV +CK TD+ F YIG Y + + LS+AFAG+SD G+ Y+L
Sbjct: 481 PMDEGFGAIVMNCKKLSRLAVSGLLTDRAFSYIGEYGKTVRTLSVAFAGDSDMGLKYLLE 540
Query: 472 GCKKLRKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEII 531
GC KL+KLEIRDSPFG+ ALL+ + Y MR LWMS+C++T GCQ +A+++P L VE+I
Sbjct: 541 GCPKLQKLEIRDSPFGDGALLSGLHHYYNMRFLWMSACKLTRNGCQQIARELPGLVVEVI 600
Query: 532 NEDDQMEFSLDDRQKVGKMYLYRTLVGPRKDAPDFV 567
N E+ D V +Y+YR+L GPR DAP FV
Sbjct: 601 NH----EYDEDMENFVDTLYMYRSLEGPRDDAPKFV 632
>UNIPROTKB|A5AZ08 [details] [associations]
symbol:VITISV_002642 "Putative uncharacterized protein"
species:29760 "Vitis vinifera" [GO:0000822 "inositol
hexakisphosphate binding" evidence=ISS] [GO:0009734 "auxin mediated
signaling pathway" evidence=ISS] GO:GO:0009734 HOGENOM:HOG000239805
GO:GO:0000822 eggNOG:NOG306499 EMBL:AM440811 RefSeq:XP_002283927.2
UniGene:Vvi.12588 GeneID:100245501 KEGG:vvi:100245501
Uniprot:A5AZ08
Length = 601
Score = 1479 (525.7 bits), Expect = 1.4e-151, P = 1.4e-151
Identities = 308/578 (53%), Positives = 392/578 (67%)
Query: 6 PDEVIEHVFD----FVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGRF 61
PD+V+E+V + F+TS++DRNAVSLVCKSWY+ E L+R +FIGNCYA+SP R I RF
Sbjct: 33 PDQVLENVLENVLLFLTSRRDRNAVSLVCKSWYRAEALTRSDLFIGNCYAVSPRRAIERF 92
Query: 62 PGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELL 121
++S+ LKGKP FADFNL+P +WG + PWV A+A S LE++ LKRM V+D LELL
Sbjct: 93 RRVRSVVLKGKPRFADFNLMPPNWGAYFTPWVTAMATSYPWLEKVYLKRMFVTDRDLELL 152
Query: 122 SRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTS 181
++SF FK LVLV C+GF T GLA IA+ CR LR LDL E EV D+ WISCFP+S T
Sbjct: 153 AQSFPAFKELVLVCCDGFGTSGLAGIASKCRQLRVLDLIEDEVTDDEVDWISCFPESGTC 212
Query: 182 LVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGSF 241
L SL F C++ IN ALERLVARSP+L+ LRLNR V + L +L++RAPQL LG GSF
Sbjct: 213 LESLIFDCIECPINFEALERLVARSPSLRKLRLNRYVSIGQLYRLMIRAPQLTHLGSGSF 272
Query: 242 -----VYDPSSEA-YIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYA 295
V E YI A CKS+ LSGF E++P L AI+PVC NLTSLN SYA
Sbjct: 273 SSSDIVAQGDQEPDYISAFAA---CKSLVCLSGFREIIPDYLPAIYPVCANLTSLNFSYA 329
Query: 296 PGIHGNELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGV---DNAAV 352
I+ +L +I C KL+ W+LDS+ D GL VA TCKEL+ELRVFP V
Sbjct: 330 -NINTEQLKSVICHCHKLQIFWVLDSVCDEGLQAVAATCKELRELRVFPIDAREDSEGPV 388
Query: 353 TEEGLVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQP 412
+E GL AIS GC KL S+LYFCQ+MTNAA+I ++KN + FRLCI+ R +PD +T +P
Sbjct: 389 SEVGLQAISEGCRKLQSILYFCQRMTNAAVIAMSKNCPDLVVFRLCIMGRHRPDHITGEP 448
Query: 413 LDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNG 472
+DEGFGAIV +CK TD+ F YIG Y + + LS+AFAG+SD G+ YVL G
Sbjct: 449 MDEGFGAIVMNCKKLTRLAISGLLTDKAFSYIGKYGKLVRTLSVAFAGDSDMGLKYVLEG 508
Query: 473 CKKLRKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIIN 532
C KL+KLEIRDSPFG+ AL + + Y MR LWMSSC ++ GC+ +A+ MP L VE+I
Sbjct: 509 CPKLQKLEIRDSPFGDAALRSGLHHYYNMRFLWMSSCRLSRQGCEEIARAMPGLVVEVIR 568
Query: 533 EDDQMEFSLDDRQKVGKMYLYRTLVGPRKDAPDFVWTL 570
+++ +D+ +Y+YR+L PR DAP+FV L
Sbjct: 569 NENE-----EDKDGFEILYMYRSLERPRIDAPEFVTIL 601
>UNIPROTKB|Q9AUH6 [details] [associations]
symbol:TIR1 "F-box containing protein TIR1" species:47664
"Populus tremula x Populus tremuloides" [GO:0000822 "inositol
hexakisphosphate binding" evidence=ISS] [GO:0009734 "auxin mediated
signaling pathway" evidence=ISS] GO:GO:0009734 GO:GO:0000822
EMBL:AF139835 ProteinModelPortal:Q9AUH6 SMR:Q9AUH6 Uniprot:Q9AUH6
Length = 635
Score = 1474 (523.9 bits), Expect = 4.7e-151, P = 4.7e-151
Identities = 300/577 (51%), Positives = 394/577 (68%)
Query: 5 FPDEVIEHVFD----FVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGR 60
+PD+V+E+V + F+TS+KDRNA SLVC+SWY++E L+R +FIGNCYA+SP+R + R
Sbjct: 65 YPDQVLENVLENVLWFLTSRKDRNAASLVCRSWYRVEALTRSDLFIGNCYAVSPKRAMSR 124
Query: 61 FPGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLEL 120
F ++S+TLKGKP FADFNL+P WG PWV A+A + LE++ LKRM V+DD L L
Sbjct: 125 FTRIRSVTLKGKPRFADFNLMPPYWGAHFAPWVSAMAMTYPWLEKVHLKRMSVTDDDLAL 184
Query: 121 LSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCT 180
L+ SF FK LVLV CEGF T GLA + + CR L+ LDL E +V D+ WISCFPD+ T
Sbjct: 185 LAESFSGFKELVLVCCEGFGTSGLAIVVSRCRQLKVLDLIESDVSDDEVDWISCFPDTET 244
Query: 181 SLVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGS 240
L SL F C+ I+ LERLVARSP+LK LRLNR V + L +L++RAP L LG GS
Sbjct: 245 CLESLIFDCVDCPIDFDELERLVARSPSLKKLRLNRYVSIGQLYRLMIRAPHLTHLGTGS 304
Query: 241 FVYDPSSE-AYIK----LKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYA 295
F PS + + ++ + CKS+ LSGF E++P L AI+PVC NLTSLN S+A
Sbjct: 305 F--SPSEDVSQVEQGPDYASAFAACKSLVCLSGFREIIPDYLPAINPVCANLTSLNFSFA 362
Query: 296 PGIHGNELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGVD-----NA 350
+ +L +I C KL+ W+LDSI D GL VA TCKEL+ELRVFP VD
Sbjct: 363 D-VSAEQLKPIISNCHKLQIFWVLDSICDEGLQAVAATCKELRELRVFP--VDPREDIEG 419
Query: 351 AVTEEGLVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTM 410
V+E GL AIS GC KL S+LYFC +MTNAA++ ++KN + FRLCI+ R +PD VT
Sbjct: 420 PVSEVGLQAISEGCRKLQSILYFCHRMTNAAVVAMSKNCPDLVVFRLCIMGRHQPDHVTG 479
Query: 411 QPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVL 470
+P+DEGFGAIV++CK TD+ F YIG Y + + LS+AFAG+SD G+ YVL
Sbjct: 480 EPMDEGFGAIVKNCKKLTRLAVSGLLTDRAFAYIGKYGKIVRTLSVAFAGDSDMGLKYVL 539
Query: 471 NGCKKLRKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEI 530
GC +L+KLEIRDSPFG+ ALL+ + Y MR LWMS+C+++ GCQ + + +PRL VE+
Sbjct: 540 EGCPRLQKLEIRDSPFGDAALLSGLHHYYNMRFLWMSACKLSRQGCQQITQALPRLVVEV 599
Query: 531 INEDDQMEFSLDDRQKVGKMYLYRTLVGPRKDAPDFV 567
I DD ++ +D+ V +Y+YR+L GPR DAP FV
Sbjct: 600 IKHDDNVD--MDEY--VDTLYMYRSLEGPRDDAPRFV 632
>UNIPROTKB|B9GV20 [details] [associations]
symbol:FBL7 "F-box family protein" species:3694 "Populus
trichocarpa" [GO:0000822 "inositol hexakisphosphate binding"
evidence=ISS] [GO:0009734 "auxin mediated signaling pathway"
evidence=ISS] GO:GO:0009734 HOGENOM:HOG000239805 GO:GO:0000822
OMA:TAMSENC ProtClustDB:CLSN2689967 eggNOG:NOG306499 EMBL:CM000338
RefSeq:XP_002302328.1 EnsemblPlants:POPTR_0002s10310.1
GeneID:7467186 KEGG:pop:POPTR_798788 Uniprot:B9GV20
Length = 635
Score = 1469 (522.2 bits), Expect = 1.6e-150, P = 1.6e-150
Identities = 297/573 (51%), Positives = 389/573 (67%)
Query: 5 FPDEVIEHVFD----FVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGR 60
+PD+V+E+V + F+TS+KDRNA SLVC+ WY++E ++R +FIGNCYA+SPER R
Sbjct: 65 YPDQVLENVLENVLWFLTSRKDRNAASLVCRLWYRVEAMTRSDLFIGNCYAVSPERATSR 124
Query: 61 FPGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLEL 120
F ++S+TLKGKP FADFNL+P +WG PWV A+AK+ LE++ LKRM V+DD L L
Sbjct: 125 FTRIRSVTLKGKPRFADFNLMPPNWGAHFAPWVSAMAKAYPWLEKIHLKRMSVTDDDLAL 184
Query: 121 LSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCT 180
L+ SF FK L LV C+GF T GLA +A+ CR L+ LDL E EV D+ WI CFPD+ T
Sbjct: 185 LAESFSGFKELALVCCDGFGTSGLAVVASKCRQLKVLDLIESEVSDDEVDWILCFPDTET 244
Query: 181 SLVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGS 240
L SL C++ I+ ALERLV RSP+LK LRLNR V + L +L++RAPQL LG GS
Sbjct: 245 CLESLILDCVECPIDFDALERLVTRSPSLKKLRLNRFVSIGQLYRLMVRAPQLTHLGTGS 304
Query: 241 FVYDPS-SEAYIKLK--ATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPG 297
F ++ ++L + CKS+ LSGF E++P L AI+PVC NLTSLN SYA
Sbjct: 305 FSQSEDVAQGELELDYGSAFAACKSLVCLSGFREIIPDYLPAIYPVCANLTSLNFSYA-N 363
Query: 298 IHGNELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFP--SGVD-NAAVTE 354
I +L +I C KL+ W+LDSI D GL VA TCKEL+ELRVFP + D V+E
Sbjct: 364 ISAEQLKPIISNCHKLQTFWVLDSICDEGLQAVATTCKELRELRVFPFEAREDIEGPVSE 423
Query: 355 EGLVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLD 414
GL AIS GC KL S+LYFC +MTNAA+I ++KN + FRLCI+ +PD VT +P+D
Sbjct: 424 VGLQAISEGCRKLQSILYFCPRMTNAAVIAMSKNCPDLVAFRLCIMGLHQPDHVTGEPMD 483
Query: 415 EGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCK 474
EGFGAIV +CK TD+ F YIG Y + + LS+AFAG+SD G+ YVL GC
Sbjct: 484 EGFGAIVMNCKKLTRLAVSGLLTDRAFAYIGKYGKIVRTLSVAFAGDSDMGLKYVLEGCP 543
Query: 475 KLRKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINED 534
KL+KLEIRDSPFG+ ALL+ + Y MR LWMS+C+++ GCQ +A+ +P L VE+I +
Sbjct: 544 KLQKLEIRDSPFGDAALLSGLHHYYNMRFLWMSACKLSHQGCQQIAQALPHLVVEVIKHE 603
Query: 535 DQMEFSLDDRQKVGKMYLYRTLVGPRKDAPDFV 567
D ++ +D+ V +Y+YR+L G R D P FV
Sbjct: 604 DNVD--MDEY--VDTLYMYRSLAGRRHDVPRFV 632
>TAIR|locus:2158824 [details] [associations]
symbol:AFB5 "AT5G49980" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0002237
"response to molecule of bacterial origin" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0010103
"stomatal complex morphogenesis" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] PROSITE:PS50181 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009734
GO:GO:0016567 GO:GO:0010011 HOGENOM:HOG000239805 GO:GO:0019005
GO:GO:0000822 EMBL:AB024032 ProtClustDB:CLSN2689967 EMBL:AY056431
EMBL:AY139774 EMBL:BT004536 EMBL:AK221208 IPI:IPI00545849
RefSeq:NP_568718.1 UniGene:At.22898 UniGene:At.75026
ProteinModelPortal:Q9LTX2 SMR:Q9LTX2 IntAct:Q9LTX2 STRING:Q9LTX2
PaxDb:Q9LTX2 PRIDE:Q9LTX2 EnsemblPlants:AT5G49980.1 GeneID:835062
KEGG:ath:AT5G49980 TAIR:At5g49980 eggNOG:NOG306499
InParanoid:Q9LTX2 OMA:EVDWISC PhylomeDB:Q9LTX2
Genevestigator:Q9LTX2 Uniprot:Q9LTX2
Length = 619
Score = 1452 (516.2 bits), Expect = 1.0e-148, P = 1.0e-148
Identities = 303/575 (52%), Positives = 383/575 (66%)
Query: 5 FPDEVIEHVFD----FVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGR 60
FPD V+E+V + F+ S+ DRNA SLVCKSW+++E L+R VFIGNCYA+SP R+ R
Sbjct: 50 FPDHVLENVLENVLQFLDSRCDRNAASLVCKSWWRVEALTRSEVFIGNCYALSPARLTQR 109
Query: 61 FPGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLEL 120
F ++SL LKGKP FADFNL+P DWG PWV +A++ LE++ LKRM V+DD L L
Sbjct: 110 FKRVRSLVLKGKPRFADFNLMPPDWGANFAPWVSTMAQAYPCLEKVDLKRMFVTDDDLAL 169
Query: 121 LSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCT 180
L+ SF FK L+LV CEGF T G++ +A CR L+ LDL E EV D+ WISCFP+ T
Sbjct: 170 LADSFPGFKELILVCCEGFGTSGISIVANKCRKLKVLDLIESEVTDDEVDWISCFPEDVT 229
Query: 181 SLVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGS 240
L SL F C++ IN ALE LVARSP LK LRLNR V L L +LL+ APQL LG GS
Sbjct: 230 CLESLAFDCVEAPINFKALEGLVARSPFLKKLRLNRFVSLVELHRLLLGAPQLTSLGTGS 289
Query: 241 FVYD--PSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGI 298
F +D P SE A CKS+ LSGF E++P L AI PVC NLTSLN SYA I
Sbjct: 290 FSHDEEPQSEQEPDYAAAFRACKSVVCLSGFRELMPEYLPAIFPVCANLTSLNFSYA-NI 348
Query: 299 HGNELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGV--DNAA-VTEE 355
+ +I C KL+ W LDSI D GL VA TCKEL+ELR+FP D+ V+E
Sbjct: 349 SPDMFKPIILNCHKLQVFWALDSICDEGLQAVAATCKELRELRIFPFDPREDSEGPVSEL 408
Query: 356 GLVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDE 415
GL AIS GC KL S+LYFCQ+MTNAA+I +++N T FRLCI+ R +PD VT +P+DE
Sbjct: 409 GLQAISEGCRKLESILYFCQRMTNAAVIAMSENCPELTVFRLCIMGRHRPDHVTGKPMDE 468
Query: 416 GFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKK 475
GFGAIV++CK TDQ F Y+G Y + + LS+AFAG+SD + +VL GC +
Sbjct: 469 GFGAIVKNCKKLTRLAVSGLLTDQAFRYMGEYGKLVRTLSVAFAGDSDMALRHVLEGCPR 528
Query: 476 LRKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDD 535
L+KLEIRDSPFG+ AL + + +Y MR +WMS+C ++ G C+ +A+ MP L VE+I DD
Sbjct: 529 LQKLEIRDSPFGDVALRSGMHRYYNMRFVWMSACSLSKGCCKDIARAMPNLVVEVIGSDD 588
Query: 536 QMEFSLDDRQKVGKMYLYRTLVGPRKDAPDFVWTL 570
D+R V +Y+YR+L GPR DAP FV L
Sbjct: 589 DD----DNRDYVETLYMYRSLDGPRNDAPKFVTIL 619
>TAIR|locus:2135942 [details] [associations]
symbol:AFB4 "AT4G24390" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0002237 "response to molecule of bacterial origin"
evidence=RCA] [GO:0007165 "signal transduction" evidence=RCA]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0048443 "stamen development" evidence=RCA] PROSITE:PS50181
UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009734 GO:GO:0016567 GO:GO:0010011
HOGENOM:HOG000239805 GO:GO:0019005 GO:GO:0000822 EMBL:AL161561
EMBL:AL078637 EMBL:AY091772 EMBL:BT006340 EMBL:AK316873
IPI:IPI00520924 PIR:T09902 RefSeq:NP_567702.2 RefSeq:NP_974607.1
UniGene:At.32351 UniGene:At.66636 ProteinModelPortal:Q8RWQ8
SMR:Q8RWQ8 IntAct:Q8RWQ8 PaxDb:Q8RWQ8 PRIDE:Q8RWQ8
EnsemblPlants:AT4G24390.1 EnsemblPlants:AT4G24390.2 GeneID:828541
KEGG:ath:AT4G24390 TAIR:At4g24390 eggNOG:NOG240877
InParanoid:Q8RWQ8 OMA:TAMSENC PhylomeDB:Q8RWQ8
ProtClustDB:CLSN2689967 Genevestigator:Q8RWQ8 Uniprot:Q8RWQ8
Length = 623
Score = 1423 (506.0 bits), Expect = 1.2e-145, P = 1.2e-145
Identities = 294/569 (51%), Positives = 369/569 (64%)
Query: 7 DEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGRFPGLKS 66
+ V+E+V F+TS+ DRNAVSLVC+SWY++E +R VFIGNCY++SP R+I RF ++S
Sbjct: 56 ENVLENVLQFLTSRCDRNAVSLVCRSWYRVEAQTRLEVFIGNCYSLSPARLIHRFKRVRS 115
Query: 67 LTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELLSRSFV 126
L LKGKP FADFNL+P +WG PWV A AK+ LE++ LKRM V+DD L LL+ SF
Sbjct: 116 LVLKGKPRFADFNLMPPNWGAQFSPWVAATAKAYPWLEKVHLKRMFVTDDDLALLAESFP 175
Query: 127 NFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTSLVSLN 186
FK L LV CEGF T G+A +A CR L+ LDL E EV D+ WISCFP+ T L SL+
Sbjct: 176 GFKELTLVCCEGFGTSGIAIVANKCRQLKVLDLMESEVTDDELDWISCFPEGETHLESLS 235
Query: 187 FSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGSFVYD-- 244
F C++ IN ALE LV RSP LK LR NR V L+ L +L++RAPQL LG GSF D
Sbjct: 236 FDCVESPINFKALEELVVRSPFLKKLRTNRFVSLEELHRLMVRAPQLTSLGTGSFSPDNV 295
Query: 245 PSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELI 304
P E A CKSI LSGF E P L AI VC NLTSLN SYA I + L
Sbjct: 296 PQGEQQPDYAAAFRACKSIVCLSGFREFRPEYLLAISSVCANLTSLNFSYA-NISPHMLK 354
Query: 305 KLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGV--DNAA-VTEEGLVAIS 361
+I C + W LDSI D GL VA TCKEL+ELR+FP D+ V+ GL AIS
Sbjct: 355 PIISNCHNIRVFWALDSIRDEGLQAVAATCKELRELRIFPFDPREDSEGPVSGVGLQAIS 414
Query: 362 AGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIV 421
GC KL S+LYFCQ MTN A+ +++N T FRLCI+ R +PD VT +P+D+GFGAIV
Sbjct: 415 EGCRKLESILYFCQNMTNGAVTAMSENCPQLTVFRLCIMGRHRPDHVTGKPMDDGFGAIV 474
Query: 422 QSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLEI 481
++CK TD+ F YIG Y + + LS+AFAGNSDK + YVL GC KL+KLEI
Sbjct: 475 KNCKKLTRLAVSGLLTDEAFSYIGEYGKLIRTLSVAFAGNSDKALRYVLEGCPKLQKLEI 534
Query: 482 RDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQMEFSL 541
RDSPFG+ L + + +Y MR +W+SSC ++ GGC+ ++ +P + VE+ D +
Sbjct: 535 RDSPFGDVGLRSGMHRYSNMRFVWLSSCLISRGGCRGVSHALPNVVVEVFGADGDDDEDT 594
Query: 542 DDRQKVGKMYLYRTLVGPRKDAPDFVWTL 570
V +YLYR+L GPRKDAP FV L
Sbjct: 595 VTGDYVETLYLYRSLDGPRKDAPKFVTIL 623
>UNIPROTKB|A9SYG2 [details] [associations]
symbol:TIRB1 "TIR1-like auxin receptor" species:145481
"Physcomitrella patens subsp. patens" [GO:0000822 "inositol
hexakisphosphate binding" evidence=ISS] [GO:0009734 "auxin mediated
signaling pathway" evidence=ISS] InterPro:IPR001810 SMART:SM00256
GO:GO:0009734 SUPFAM:SSF81383 GO:GO:0000822 EMBL:DS545026
RefSeq:XP_001771423.1 ProteinModelPortal:A9SYG2 SMR:A9SYG2
EnsemblPlants:PP1S137_148V6.1 EnsemblPlants:PP1S137_148V6.2
GeneID:5934602 KEGG:ppp:PHYPADRAFT_189783 ProtClustDB:CLSN2705023
Uniprot:A9SYG2
Length = 570
Score = 1420 (504.9 bits), Expect = 2.5e-145, P = 2.5e-145
Identities = 285/571 (49%), Positives = 391/571 (68%)
Query: 1 MMNYFPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGR 60
M + FPDEV+EHV F+T KDRN+VSLVCK+W + E SR+ VFIGNCYA SP ++ R
Sbjct: 1 MPSLFPDEVLEHVLVFLTGHKDRNSVSLVCKAWCRAEGWSRRDVFIGNCYASSPTILLRR 60
Query: 61 FPGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLEL 120
FP L SL +KG+P F DF L+P WG ++ PW+EALA GLE LRLKRM VSD+ L +
Sbjct: 61 FPKLTSLAMKGRPRFTDFGLVPSSWGAFIQPWIEALADHYNGLECLRLKRMTVSDESLRI 120
Query: 121 LSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCT 180
++ +F NF+SL L SC+GFTTDGL I +CR+L ELDLQE E+ W++ FP++ T
Sbjct: 121 VALAFPNFRSLRLSSCDGFTTDGLEWITRHCRHLTELDLQENEIQVRGVGWLTAFPETQT 180
Query: 181 SLVSLNFSCLK---GEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLG 237
SL SLNF+ + E + +L LV R P L L+LNR + L+ +Q+LL++APQL DLG
Sbjct: 181 SLESLNFANIHTPLDEYDFHSLYALVTRCPKLTKLKLNREITLEQMQRLLLQAPQLEDLG 240
Query: 238 IGSFVYDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPG 297
G++ + + +L+++ + ++IR+LSGF + VP CL P+C+ L +L+LS
Sbjct: 241 TGAYNQNLTWGRLHELQSSFRRVRNIRTLSGFWDTVPMCLPTCFPICKELITLDLSTV-A 299
Query: 298 IHGNELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGL 357
+ + K I C ++RL + DS+GDRGL V +C++L+ELRV+P D + VTE+GL
Sbjct: 300 LTPADFTKFITNCVNIQRLLVQDSVGDRGLFYVGRSCRQLRELRVYPFN-DQSNVTEKGL 358
Query: 358 VAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGF 417
VAIS GC ++ +LYFC+QMTNAA+I A+N SN T FR+ ++ PD T QPLDEGF
Sbjct: 359 VAISDGCREMRKILYFCKQMTNAAMIQFARNCSNMTHFRMAMVTVYDPDCDTKQPLDEGF 418
Query: 418 GAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLR 477
GA+ + CK TD+ F YIG YA++LE LS+AFAG++D GM++VL+GC LR
Sbjct: 419 GAVCKLCKDLRRLSLSGLLTDKTFEYIGTYAKKLETLSVAFAGDTDMGMVHVLDGCPVLR 478
Query: 478 KLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQM 537
KLE+RD PFG+ ALL+ + KYE+MR+LWMSSC VT+ G Q LA K P LNVE+I D +M
Sbjct: 479 KLEVRDCPFGDEALLSGIDKYESMRALWMSSCRVTIDGVQFLASKNPNLNVEVIR-DIEM 537
Query: 538 EFSLDDRQKVGKMYLYRTLVGPRKDAPDFVW 568
L + V K+Y+YR++ PR+DAP FV+
Sbjct: 538 ---LHHPEYVEKLYVYRSIAEPRQDAPPFVY 565
>UNIPROTKB|A9TAY1 [details] [associations]
symbol:TIRB2 "TIRB2 TIR1-like auxin receptor protein"
species:145481 "Physcomitrella patens subsp. patens" [GO:0000822
"inositol hexakisphosphate binding" evidence=ISS] [GO:0009734
"auxin mediated signaling pathway" evidence=ISS] InterPro:IPR001810
GO:GO:0009734 SUPFAM:SSF81383 GO:GO:0000822 ProtClustDB:CLSN2705023
EMBL:DS545085 RefSeq:XP_001775745.1 UniGene:Ppa.17296
ProteinModelPortal:A9TAY1 SMR:A9TAY1 EnsemblPlants:PP1S196_87V6.1
GeneID:5938978 KEGG:ppp:PHYPADRAFT_193240 Uniprot:A9TAY1
Length = 567
Score = 1419 (504.6 bits), Expect = 3.2e-145, P = 3.2e-145
Identities = 290/573 (50%), Positives = 390/573 (68%)
Query: 1 MMNYFPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGR 60
M++ FPDEV+EHV F+T +DRN+VSLVCK+W + E SR+SVFIGNCYA SP ++ R
Sbjct: 1 MLSVFPDEVLEHVLVFLTDHRDRNSVSLVCKAWCRTEGWSRRSVFIGNCYAASPNLLLRR 60
Query: 61 FPGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLEL 120
FP L SL +KG+P F DF L+P +WG ++ PW+EALA+ GLE LRLKRM VSD+ L +
Sbjct: 61 FPKLTSLEMKGRPRFTDFGLVPSNWGAFIQPWIEALAEHYAGLECLRLKRMTVSDESLRI 120
Query: 121 LSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCT 180
++ +F NF+SL L SC+GFTTDGL I +CR+L+ELDLQE E+ W++ FP+S T
Sbjct: 121 IALAFPNFRSLRLASCDGFTTDGLQWITRHCRHLKELDLQENEIQVRSVGWLTAFPESQT 180
Query: 181 SLVSLNFSCLK---GEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLG 237
+L SL+F+ ++ E + +L LVAR P LK L+LNR V L+ +QKLL+ APQL DLG
Sbjct: 181 TLESLSFANIQTPLDEYDFHSLYALVARCPRLKRLKLNREVTLEQMQKLLLLAPQLEDLG 240
Query: 238 IGSFVYDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPG 297
G++ + L+A+ K K+IRSLSGF +V P CL P+C L +L+LS
Sbjct: 241 TGAYNQKLTWGKLHDLQASFRKVKNIRSLSGFWDVSPRCLPTCFPICNELITLDLSTV-A 299
Query: 298 IHGNELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGL 357
+ + K C KL RL + DS+GD GL VA CK+L ELRV+P + + VTE+G
Sbjct: 300 LTTADFTKSTTNCVKLRRLLVQDSVGDEGLLHVARCCKQLTELRVYPFN-NQSNVTEKGF 358
Query: 358 VAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGF 417
+AIS GC + +LYFC+QM+NAA+I A+N N T FR+ ++ D VT PLDEGF
Sbjct: 359 IAISEGCRDMRKILYFCKQMSNAAMIQFARNCPNMTHFRMAMVTVYDRDCVTNDPLDEGF 418
Query: 418 GAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLR 477
GA+ + CK TD+ F YIGMYA++LE LS+AFAG++D GM+ VL+GC LR
Sbjct: 419 GAVCKLCKNLRRLSLSGLLTDKTFEYIGMYAKKLETLSVAFAGDTDLGMVNVLDGCPALR 478
Query: 478 KLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQM 537
KLE+RD PFG+ ALL+ + KYE+MR+LWMSSC++T G Q LA K P LNVEII + ++
Sbjct: 479 KLEVRDCPFGDEALLSGIEKYESMRALWMSSCQLTRDGVQFLADKNPNLNVEIIVDVEKS 538
Query: 538 EFSLDDRQKVGKMYLYRTLVGPRKDAPDFVWTL 570
D + V K+Y+YR++ GPR+DAP FV TL
Sbjct: 539 H----DPEYVEKLYVYRSIAGPREDAPYFVDTL 567
>UNIPROTKB|A5AML2 [details] [associations]
symbol:VITISV_036655 "Putative uncharacterized protein"
species:29760 "Vitis vinifera" [GO:0000822 "inositol
hexakisphosphate binding" evidence=ISS] [GO:0009734 "auxin mediated
signaling pathway" evidence=ISS] InterPro:IPR001810 SMART:SM00256
GO:GO:0009734 GO:GO:0000822 eggNOG:NOG267823 EMBL:AM430241
ProteinModelPortal:A5AML2 SMR:A5AML2 Uniprot:A5AML2
Length = 590
Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
Identities = 206/370 (55%), Positives = 267/370 (72%)
Query: 205 RSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGSFVYDPSSEAYIKLKATLVKCKSIR 264
R P+L++LRLNRAVPLD L LL RAPQLV+LG G++ + E + L CK ++
Sbjct: 219 RCPSLRTLRLNRAVPLDRLPNLLRRAPQLVELGTGAYSAEHRPEVFSSLAGAFSNCKELK 278
Query: 265 SLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWILDSIGD 324
SLSGF +VVP L A++P C +TSLNLSYA I +LIKL+ C+ L+RLW+LD I D
Sbjct: 279 SLSGFWDVVPDYLPAVYPACSGITSLNLSYAT-IQSPDLIKLVTQCQNLQRLWVLDYIED 337
Query: 325 RGLGVVAFTCKELQELRVFPSG-VD---NAAVTEEGLVAISAGCPKLHSLLYFCQQMTNA 380
GL +A +CK+LQELRVFPS D N A+TE+GLV++S GCPKLHS+LYFC+QMTNA
Sbjct: 338 SGLDALAASCKDLQELRVFPSEPYDMEGNVALTEQGLVSVSEGCPKLHSVLYFCRQMTNA 397
Query: 381 ALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQV 440
AL+++AKN N TRFRLCI++ D T++PLD GFGAIV+ CK TD+V
Sbjct: 398 ALVSIAKNRPNMTRFRLCIIEPRTRDYQTLEPLDVGFGAIVEHCKELHRLSLSGLLTDRV 457
Query: 441 FLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKYET 500
F YIG +A++LEMLS+AFAG+ D G+ +VL+GCK LRKLEIRD PFG+ ALL + K ET
Sbjct: 458 FEYIGTHAKKLEMLSVAFAGDGDLGLHHVLSGCKSLRKLEIRDCPFGDKALLANAAKLET 517
Query: 501 MRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQMEFSLDDRQKVGKMYLYRTLVGPR 560
MRSLWMSSC V+ G C+ L +KMPRLNVE+++E + + S + V K+Y+YR++ GPR
Sbjct: 518 MRSLWMSSCSVSFGACKLLGQKMPRLNVEVMDERGRPD-SRPESCSVEKLYIYRSVAGPR 576
Query: 561 KDAPDFVWTL 570
D P FVWT+
Sbjct: 577 SDMPRFVWTM 586
Score = 905 (323.6 bits), Expect = 9.3e-91, P = 9.3e-91
Identities = 191/359 (53%), Positives = 244/359 (67%)
Query: 2 MNY-FPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGR 60
M Y FP+EV+EHVF F+ + KDRNA+SLVCKSWY++ER SR+ +FIGNCYA+SP VI R
Sbjct: 1 MAYSFPEEVLEHVFSFIHTDKDRNAISLVCKSWYEVERWSRRRIFIGNCYAVSPGIVIRR 60
Query: 61 FPGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLEL 120
FP L+S+ LKGKPHFADFNL+P WGG VYPW+ A+A + LEELRLKRMVV+D+ LEL
Sbjct: 61 FPELRSVALKGKPHFADFNLVPDGWGGNVYPWIAAMAMAYPMLEELRLKRMVVTDESLEL 120
Query: 121 LSRSFVNFKSLVLVSCEGFTTDGLAAIAANC--RYLRELDLQEIEVDD-------NRGQW 171
+SRSF NFK LVL SCEGF+TDGLAAIAANC R+ E + ++ N+ +
Sbjct: 121 ISRSFKNFKVLVLSSCEGFSTDGLAAIAANCSGRFSEESRISSFDLLSFATFFLSNQTKR 180
Query: 172 ISCFP--DSCTSLVSLNFSCLKGEINLTALERLVA---RSPNLKSLRLNRAVPLDTLQKL 226
+ F +C + S + + A R P+L++LRLNRAVPLD L L
Sbjct: 181 YNRFELKPACEVDIGSPISLIPDFAHHWCPSTFPAWPPRCPSLRTLRLNRAVPLDRLPNL 240
Query: 227 LMRAPQLVDLGIGSFVYDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQN 286
L RAPQLV+LG G++ + E + L CK ++SLSGF +VVP L A++P C
Sbjct: 241 LRRAPQLVELGTGAYSAEHRPEVFSSLAGAFSNCKELKSLSGFWDVVPDYLPAVYPACSG 300
Query: 287 LTSLNLSYAPGIHGNELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPS 345
+TSLNLSYA I +LIKL+ C+ L+RLW+LD I D GL +A +CK+LQELRVFPS
Sbjct: 301 ITSLNLSYAT-IQSPDLIKLVTQCQNLQRLWVLDYIEDSGLDALAASCKDLQELRVFPS 358
>UNIPROTKB|A5C819 [details] [associations]
symbol:VITISV_016565 "Putative uncharacterized protein"
species:29760 "Vitis vinifera" [GO:0000822 "inositol
hexakisphosphate binding" evidence=ISS] [GO:0009734 "auxin mediated
signaling pathway" evidence=ISS] InterPro:IPR001810 SMART:SM00256
GO:GO:0009734 GO:GO:0000822 eggNOG:KOG1947 EMBL:AM485570
Uniprot:A5C819
Length = 620
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 161/315 (51%), Positives = 221/315 (70%)
Query: 5 FPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGRFPGL 64
FPDEV+E V V S KDR++VSLVCK WY ER SR VFIGNCY++SPE V RFP +
Sbjct: 21 FPDEVLERVLGLVKSHKDRSSVSLVCKDWYNAERWSRTHVFIGNCYSVSPEIVARRFPNI 80
Query: 65 KSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELLSRS 124
+S+TLKGKP F+DFNL+P +WG ++ W+ A LEELRLKRM V+D+ LE L+ +
Sbjct: 81 RSVTLKGKPRFSDFNLVPLNWGADIHAWLVVFASKYPLLEELRLKRMTVTDESLEFLATT 140
Query: 125 FVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTSLVS 184
F NFK+L L+SC+GF+TDGLAAIA +C+ + ELD+QE +DD G W+SCFP++ TSL
Sbjct: 141 FTNFKALSLLSCDGFSTDGLAAIATHCKNMTELDIQENGIDDLGGGWLSCFPENFTSLEV 200
Query: 185 LNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGSFVYD 244
LNF+ L +++ ALE+LV+R +LK L++N+ + L+ LQ+LL APQL +LG GSF +
Sbjct: 201 LNFANLSSDVSFDALEKLVSRCRSLKFLKVNKNITLEQLQRLLECAPQLTELGTGSFHQE 260
Query: 245 PSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELI 304
++ Y +L++ CK++ +LSG E P L ++P C NLT LNLS A + EL
Sbjct: 261 LTTRQYAELESAFNNCKNLNTLSGLCEATPLYLPVLYPACMNLTFLNLSDA-ALQSGELA 319
Query: 305 KLIRFCRKLERLWIL 319
KL+ C L+RLW++
Sbjct: 320 KLLDHCPNLQRLWVI 334
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 189/506 (37%), Positives = 263/506 (51%)
Query: 74 HFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELLSRSFVNFKSLVL 133
+F +LL D G+ + A+A + EL ++ + D LS NF SL +
Sbjct: 143 NFKALSLLSCD--GFSTDGLAAIATHCKNMTELDIQENGIDDLGGGWLSCFPENFTSLEV 200
Query: 134 VSCEGFTTD----GLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTSLVSLNFSC 189
++ ++D L + + CR L+ L + + + + + C P T L + +F
Sbjct: 201 LNFANLSSDVSFDALEKLVSRCRSLKFLKVNKNITLEQLQRLLECAPQ-LTELGTGSFHQ 259
Query: 190 LKGEINLTALERLVARSPNLKSLR-LNRAVPLDTLQKLLMRAPQLVDLGIGSFVYDPSSE 248
LE NL +L L A PL L L L L + S E
Sbjct: 260 ELTTRQYAELESAFNNCKNLNTLSGLCEATPL-YLPVLYPACMNLTFLNLSDAALQ-SGE 317
Query: 249 AYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIR 308
L L C +++ L L L ++ PV NL SL + N +
Sbjct: 318 ----LAKLLDHCPNLQRLWVIL------LISVVPVMLNL-SLGIMPXSDSMDNSM----- 361
Query: 309 FCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGVDNA----AVTEEGLVAISAGC 364
C L + I C L+ELRVFP+ VTE G VA+S GC
Sbjct: 362 -CFSLFNXLVPTPISQHSSSPSRIICPLLEELRVFPADPYEQDVVHGVTEMGFVAVSYGC 420
Query: 365 PKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSC 424
P+LH +LYFC+QMTNAA+ T+ KN +FT FRLC+++ +PD +T +P+DE FGA+V++C
Sbjct: 421 PRLHYVLYFCRQMTNAAVATIVKNCPDFTHFRLCVMNPGEPDYLTDEPMDEAFGAVVKNC 480
Query: 425 KXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLEIRDS 484
TD F YIG YA+ LE LS+AFAG+SD GM VL+GC KLRKLEIRD
Sbjct: 481 TKLQRLAVSGLLTDLTFEYIGKYAKNLETLSVAFAGSSDWGMQCVLSGCSKLRKLEIRDC 540
Query: 485 PFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQMEFSLDDR 544
PFGN ALL+ + KYE+MRSLWMS+C VT+ C+ LAK+MPRLNVE++ +++ DD
Sbjct: 541 PFGNEALLSGLEKYESMRSLWMSACNVTMNACRRLAKQMPRLNVEVMKDEES-----DDS 595
Query: 545 QKVGKMYLYRTLVGPRKDAPDFVWTL 570
Q K+Y+YR++ GPR+DAP FV TL
Sbjct: 596 Q-ADKVYVYRSVAGPRRDAPPFVLTL 620
>TAIR|locus:2061136 [details] [associations]
symbol:COI1 "CORONATINE INSENSITIVE 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=RCA;TAS] [GO:0009861 "jasmonic acid and ethylene-dependent
systemic resistance" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=IGI;TAS] [GO:0009625 "response to insect"
evidence=IMP] [GO:0009611 "response to wounding" evidence=IMP]
[GO:0009753 "response to jasmonic acid stimulus" evidence=IMP]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IPI]
[GO:0031348 "negative regulation of defense response" evidence=IMP]
[GO:0010118 "stomatal movement" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0009641 "shade avoidance" evidence=IMP] [GO:0009909 "regulation
of flower development" evidence=IMP] [GO:0010218 "response to far
red light" evidence=IMP] [GO:0002237 "response to molecule of
bacterial origin" evidence=RCA] [GO:0007165 "signal transduction"
evidence=RCA] [GO:0010103 "stomatal complex morphogenesis"
evidence=RCA] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0006952 "defense response" evidence=TAS] PROSITE:PS50181
UniPathway:UPA00143 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0031348 GO:GO:0050832 GO:GO:0042742 GO:GO:0010218
GO:GO:0010118 GO:GO:0016567 GO:GO:0019005 GO:GO:0009909
GO:GO:0009641 GO:GO:0009867 GO:GO:0031146 EMBL:AF002109
EMBL:AF036340 EMBL:EF470606 EMBL:EF470607 EMBL:EF470608
EMBL:EF470609 EMBL:EF470610 EMBL:EF470611 EMBL:EF470612
EMBL:EF470613 EMBL:EF470614 EMBL:EF470615 EMBL:EF470616
EMBL:EF470617 EMBL:EF470619 EMBL:EF470620 EMBL:EF470621
EMBL:EF470622 EMBL:EF470623 EMBL:EF470624 EMBL:AY045625
EMBL:AY133556 IPI:IPI00516922 PIR:T52139 RefSeq:NP_565919.1
UniGene:At.20831 UniGene:At.71018 PDB:3OGK PDB:3OGL PDB:3OGM
PDBsum:3OGK PDBsum:3OGL PDBsum:3OGM ProteinModelPortal:O04197
SMR:O04197 DIP:DIP-31324N IntAct:O04197 STRING:O04197 PaxDb:O04197
PRIDE:O04197 EnsemblPlants:AT2G39940.1 GeneID:818581
KEGG:ath:AT2G39940 GeneFarm:4758 TAIR:At2g39940 eggNOG:NOG262527
HOGENOM:HOG000238474 InParanoid:O04197 KO:K13463 OMA:ARNCRSL
PhylomeDB:O04197 ProtClustDB:CLSN2688817 EvolutionaryTrace:O04197
Genevestigator:O04197 GermOnline:AT2G39940 GO:GO:0009861
GO:GO:0009625 Uniprot:O04197
Length = 592
Score = 713 (256.0 bits), Expect = 2.1e-70, P = 2.1e-70
Identities = 182/580 (31%), Positives = 294/580 (50%)
Query: 7 DEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGRFPGLKS 66
D+VIE V ++T KDR++ SLVC+ W+KI+ +R+ V + CY +P+R+ RFP L+S
Sbjct: 18 DDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALCYTATPDRLSRRFPNLRS 77
Query: 67 LTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELLSRSFV 126
L LKGKP A FNL+P +WGG+V PWV ++ + L+ + +RM+VSD L+ L+++
Sbjct: 78 LKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARA 137
Query: 127 N-FKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTSLVSL 185
+ ++L L C GFTTDGL +I +CR ++ L ++E + G+W+ TSL L
Sbjct: 138 DDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVL 197
Query: 186 NFSCLK-GEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGSFVYD 244
NF + +I+ LE + +L S+++ L+ L A L + GS D
Sbjct: 198 NFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNED 256
Query: 245 PSS-EAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNEL 303
E Y+ L C+ S G P + + P + L+L YA + +
Sbjct: 257 IGMPEKYMNLVFPRKLCRLGLSYMG-----PNEMPILFPFAAQIRKLDLLYAL-LETEDH 310
Query: 304 IKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVF----PSGVDN--AAVTEEGL 357
LI+ C LE L + IGDRGL V+A CK+L+ LR+ G+++ V++ GL
Sbjct: 311 CTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGL 370
Query: 358 VAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGF 417
+A++ GC +L + + +TN +L ++ N FRL +LDRE + +T PLD G
Sbjct: 371 IALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDRE--ERITDLPLDNGV 428
Query: 418 GAIVQSCKXXXXXXXXXXX---TDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCK 474
+++ CK TD YIG Y+ + + + + G SD+G++ GC
Sbjct: 429 RSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCP 488
Query: 475 KLRKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINE- 533
L+KLE+R F A+ V K ++R LW+ ++ G + P N+E+I
Sbjct: 489 NLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548
Query: 534 ---DDQMEFSLDDRQKVGKMYLYRTLVGPRKDAPDFVWTL 570
+ + + + + + Y +L G R D P V L
Sbjct: 549 RVPEVNQQGEIREMEHPAHILAYYSLAGQRTDCPTTVRVL 588
>TAIR|locus:505006471 [details] [associations]
symbol:AT4G15475 "AT4G15475" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0006486 "protein glycosylation" evidence=RCA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161541 SUPFAM:SSF81383
InterPro:IPR006553 SMART:SM00367 EMBL:Z97339 eggNOG:NOG300245
KO:K10268 EMBL:AF360328 EMBL:AF361808 EMBL:AY056338 EMBL:AY084229
IPI:IPI00544862 RefSeq:NP_567467.1 UniGene:At.26216
UniGene:At.66613 ProteinModelPortal:Q9C5D2 SMR:Q9C5D2
EnsemblPlants:AT4G15475.1 GeneID:827219 KEGG:ath:AT4G15475
TAIR:At4g15475 HOGENOM:HOG000243338 InParanoid:Q9C5D2 OMA:NGCHNIG
PhylomeDB:Q9C5D2 ProtClustDB:CLSN2689449 Genevestigator:Q9C5D2
Uniprot:Q9C5D2
Length = 610
Score = 209 (78.6 bits), Expect = 8.7e-20, Sum P(2) = 8.7e-20
Identities = 90/392 (22%), Positives = 171/392 (43%)
Query: 98 KSRVGLEELRLKRMVVSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLREL 157
K+ G E + + +D L L+ F ++L L+ C ++ GL ++A C L+ L
Sbjct: 114 KTHSGAENVESSSL--TDTGLTALANGFPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSL 171
Query: 158 DLQEIEVDDNRGQWISCFPDSCTSLVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRA 217
DLQ V D Q ++ C L LN +G ++ ++ +V S +LKS+ + +
Sbjct: 172 DLQGCYVGD---QGLAAVGKFCKQLEELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAAS 228
Query: 218 VPLD--TLQKLLMRAPQLVDLGIGS-FVYDPSSEAYIKLKATLVKCKSIRSLS-GFLEVV 273
+ +L+ + L L + S +++D L A C +++L + V
Sbjct: 229 AKITDLSLEAVGSHCKLLEVLYLDSEYIHDKG------LIAVAQGCHRLKNLKLQCVSVT 282
Query: 274 PCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWILDS--IGDRGLGVVA 331
+A+ +C +L L L + + + +KL+ L + D + +GL +A
Sbjct: 283 DVAFAAVGELCTSLERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIA 342
Query: 332 FTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSL-LYFCQQMTNAALITVAKNNS 390
CKEL+ + + +G N + G+ AI CP+L L L +CQ++ N+AL + K
Sbjct: 343 HGCKELERVEI--NGCHN--IGTRGIEAIGKSCPRLKELALLYCQRIGNSALQEIGKGCK 398
Query: 391 NFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQ 450
+ L +D + M + +G ++ K + + IG + +
Sbjct: 399 SLEILHL--VDCSGIGDIAMCSIAKG----CRNLKKLHIRRCYEIGNKGI-ISIGKHCKS 451
Query: 451 LEMLSIAFAGN-SDKGMLYVLNGCKKLRKLEI 481
L LS+ F +K ++ + GC L++L +
Sbjct: 452 LTELSLRFCDKVGNKALIAIGKGCS-LQQLNV 482
Score = 145 (56.1 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 71/297 (23%), Positives = 127/297 (42%)
Query: 95 ALAKSRVGLEELRLKRMVVSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYL 154
A+A+ L+ L+L+ + V+D + + + L L S + FT G+ AI + L
Sbjct: 263 AVAQGCHRLKNLKLQCVSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAIGKGSKKL 322
Query: 155 RELDLQEIEVDDNRGQWISCFPDSCTSL--VSLNFSCLKGEINLTALERLVARSPNLKSL 212
++L L + +G + C L V +N C I +E + P LK L
Sbjct: 323 KDLTLSDCYFVSCKG--LEAIAHGCKELERVEIN-GC--HNIGTRGIEAIGKSCPRLKEL 377
Query: 213 RLN--RAVPLDTLQKLLMRAPQLVDLGIGSFVYDPSSEAYIKLKATLVKCKSIRSLS--G 268
L + + LQ++ L L + D S I + + C++++ L
Sbjct: 378 ALLYCQRIGNSALQEIGKGCKSLEILHL----VDCSGIGDIAMCSIAKGCRNLKKLHIRR 433
Query: 269 FLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWI--LDSIGDRG 326
E+ + +I C++LT L+L + + LI + + C L++L + + I D G
Sbjct: 434 CYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIGKGC-SLQQLNVSGCNQISDAG 492
Query: 327 LGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSL-LYFCQQMTNAAL 382
+ +A C +L L + S + N + + L + GCP L L L C +T+ L
Sbjct: 493 ITAIARGCPQLTHLDI--SVLQN--IGDMPLAELGEGCPMLKDLVLSHCHHITDNGL 545
Score = 142 (55.0 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 82/375 (21%), Positives = 147/375 (39%)
Query: 113 VSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWI 172
++D LE + S ++ + E GL A+A C L+ L LQ + V D
Sbjct: 231 ITDLSLEAVG-SHCKLLEVLYLDSEYIHDKGLIAVAQGCHRLKNLKLQCVSVTDVA---F 286
Query: 173 SCFPDSCTSLVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRA--VPLDTLQKLLMRA 230
+ + CTSL L + + + S LK L L+ V L+ +
Sbjct: 287 AAVGELCTSLERLALYSFQ-HFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGC 345
Query: 231 PQLVDLGIGSFVYDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSL 290
+L + I ++ + + + + K + +L + L I C++L L
Sbjct: 346 KELERVEING-CHNIGTRGIEAIGKSCPRLKEL-ALLYCQRIGNSALQEIGKGCKSLEIL 403
Query: 291 NLSYAPGIHGNELIKLIRFCRKLERLWILD--SIGDRGLGVVAFTCKELQELRV-FPSGV 347
+L GI + + + CR L++L I IG++G+ + CK L EL + F V
Sbjct: 404 HLVDCSGIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELSLRFCDKV 463
Query: 348 DNAAVTEEGLVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDP 407
N A L+AI GC + C Q+++A + +A+ T + +L P
Sbjct: 464 GNKA-----LIAIGKGCSLQQLNVSGCNQISDAGITAIARGCPQLTHLDISVLQNIGDMP 518
Query: 408 VTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFA-GNSDKGM 466
+ L EG + TD ++ + LE + + G + G+
Sbjct: 519 LA--ELGEGCPMLKD-----LVLSHCHHITDNGLNHLVQKCKLLETCHMVYCPGITSAGV 571
Query: 467 LYVLNGCKKLRKLEI 481
V++ C ++K+ I
Sbjct: 572 ATVVSSCPHIKKVLI 586
Score = 131 (51.2 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 89/404 (22%), Positives = 156/404 (38%)
Query: 134 VSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTSLVSLNFS-CLKG 192
V T GL A+A + L L I + + CTSL SL+ C G
Sbjct: 122 VESSSLTDTGLTALANGFPRIENLSL--IWCPNVSSVGLCSLAQKCTSLKSLDLQGCYVG 179
Query: 193 EINLTALERLVARSPNLKSLRLNRAVP-LDTLQKLLMRAPQLVDLGIGSFVYDPSSEAYI 251
+ L A+ + + L +LR + + + ++ + L +G+ + + +
Sbjct: 180 DQGLAAVGKFCKQLEEL-NLRFCEGLTDVGVIDLVVGCSKSLKSIGVAA----SAKITDL 234
Query: 252 KLKATLVKCKSIRSLSGFLEVV-PCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFC 310
L+A CK + L E + L A+ C L +L L + + C
Sbjct: 235 SLEAVGSHCKLLEVLYLDSEYIHDKGLIAVAQGCHRLKNLKLQCV-SVTDVAFAAVGELC 293
Query: 311 RKLERL--WILDSIGDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLH 368
LERL + D+G+ + K+L++L + D V+ +GL AI+ GC +L
Sbjct: 294 TSLERLALYSFQHFTDKGMRAIGKGSKKLKDLTLS----DCYFVSCKGLEAIAHGCKELE 349
Query: 369 SL-LYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXX 427
+ + C + + + K+ L R + L E I + CK
Sbjct: 350 RVEINGCHNIGTRGIEAIGKSCPRLKELALLYCQR-----IGNSALQE----IGKGCKSL 400
Query: 428 XXXXXX--XXXTDQVFLYIGMYAEQLEMLSIAFAGN-SDKGMLYVLNGCKKLRKLEIRD- 483
D I L+ L I +KG++ + CK L +L +R
Sbjct: 401 EILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELSLRFC 460
Query: 484 SPFGNTALLTDVGKYETMRSLWMSSC-EVTLGGCQTLAKKMPRL 526
GN AL+ +GK +++ L +S C +++ G +A+ P+L
Sbjct: 461 DKVGNKALIA-IGKGCSLQQLNVSGCNQISDAGITAIARGCPQL 503
Score = 116 (45.9 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 58/255 (22%), Positives = 108/255 (42%)
Query: 93 VEALAKSRVGLEELRLKRMV-VSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANC 151
+EA+ KS L+EL L + + L+ + + + + L LV C G + +IA C
Sbjct: 364 IEAIGKSCPRLKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGC 423
Query: 152 RYLRELDLQEIEVDDNRGQWISCFPDSCTSLVSLNFS-CLK-GEINLTALERLVARSPNL 209
R L++L ++ N+G I C SL L+ C K G L A + + +L
Sbjct: 424 RNLKKLHIRRCYEIGNKG--IISIGKHCKSLTELSLRFCDKVGNKALIA----IGKGCSL 477
Query: 210 KSLRLNRAVPLDT--LQKLLMRAPQLVDLGIGSFVYDPSSEAYIKLKATLVKCKSIRSLS 267
+ L ++ + + + PQL L I S + + +L K + LS
Sbjct: 478 QQLNVSGCNQISDAGITAIARGCPQLTHLDI-SVLQNIGDMPLAELGEGCPMLKDL-VLS 535
Query: 268 GFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERL----WILDSIG 323
+ L+ + C+ L + ++ Y PGI + ++ C ++++ W +
Sbjct: 536 HCHHITDNGLNHLVQKCKLLETCHMVYCPGITSAGVATVVSSCPHIKKVLIEKWKVTERT 595
Query: 324 DRGLG-VVAFTCKEL 337
R G V+++ C +L
Sbjct: 596 TRRAGSVISYLCMDL 610
Score = 105 (42.0 bits), Expect = 8.7e-20, Sum P(2) = 8.7e-20
Identities = 23/56 (41%), Positives = 35/56 (62%)
Query: 3 NYFPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVI 58
N P+E+I +F + S+ +R+A SLVCK W +ER SR ++ IG + SP+ I
Sbjct: 9 NCLPEELILEIFRRLESKPNRDACSLVCKRWLSLERFSRTTLRIGASF--SPDDFI 62
Score = 44 (20.5 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 96 LAKSRVGLEELRLKRMVVSDDCLELLSRSFVNFKSL 131
L+ R LR+ DD + LLSR F+ S+
Sbjct: 40 LSLERFSRTTLRIGASFSPDDFISLLSRRFLYITSI 75
>TAIR|locus:2155578 [details] [associations]
symbol:SKIP2 "AT5G67250" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0005737
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0004842 EMBL:AB020742
EMBL:AB025614 HOGENOM:HOG000240905 ProtClustDB:CLSN2681910
EMBL:AF263378 EMBL:AY056152 EMBL:BT002473 EMBL:BT008886
EMBL:AK226338 IPI:IPI00542641 RefSeq:NP_569047.1 UniGene:At.20927
UniGene:At.48122 ProteinModelPortal:Q9FE83 SMR:Q9FE83 IntAct:Q9FE83
STRING:Q9FE83 PaxDb:Q9FE83 PRIDE:Q9FE83 EnsemblPlants:AT5G67250.1
GeneID:836860 KEGG:ath:AT5G67250 TAIR:At5g67250 eggNOG:NOG251477
InParanoid:Q9FE83 OMA:RSVCLKD PhylomeDB:Q9FE83
Genevestigator:Q9FE83 Uniprot:Q9FE83
Length = 527
Score = 202 (76.2 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 104/402 (25%), Positives = 171/402 (42%)
Query: 6 PDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISP--ERVIGRFPG 63
PDE + HVF F+ + DR SLVCK W ++ SR + + IS + RF
Sbjct: 47 PDECLAHVFQFLGAG-DRKRCSLVCKRWLLVDGQSRHRLSLDAKDEISSFLTSMFNRFDS 105
Query: 64 LKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELLSR 123
+ L L+ D + V L +RV L R ++D +E ++
Sbjct: 106 VTKLALR-----CDRKSVSLSDEALAMISVRCLNLTRVKLRGCR----EITDLGMEDFAK 156
Query: 124 SFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTSLV 183
+ N K L + SC F G+ A+ +C+ L EL ++ + + I PD +S
Sbjct: 157 NCKNLKKLSVGSCN-FGAKGVNAMLEHCKLLEELSVKRLRGIHEAAELIH-LPDDASSS- 213
Query: 184 SLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVP------------LDTLQKLLMRAP 231
SL CLK +N E L+A + LK+L++ R + +L ++ +
Sbjct: 214 SLRSICLKELVNGQVFEPLLATTRTLKTLKIIRCLGDWDKVLQMIANGKSSLSEIHLERL 273
Query: 232 QLVDLGIGSFVYDPSSEAYIKLKAT------LV----KCKSIRSL--SGFL--EVVPCCL 277
Q+ D+G+ + + E +K L+ +CK +R L G+ + L
Sbjct: 274 QVSDIGLSAISKCSNVETLHIVKTPECSNFGLIYVAERCKLLRKLHIDGWRTNRIGDEGL 333
Query: 278 SAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKEL 337
++ C NL L L H + L + C KLERL + S G G +A ++
Sbjct: 334 LSVAKHCLNLQELVLIGVNATHMS-LAAIASNCEKLERLALCGS-GTIGDTEIACIARKC 391
Query: 338 QELRVFPSGVDNAAVTEEGLVAISAGCPKLHSL-LYFCQQMT 378
LR F + V++ G+ A++ GCP L L + C+ +T
Sbjct: 392 GALRKFC--IKGCPVSDRGIEALAVGCPNLVKLKVKKCKVVT 431
Score = 174 (66.3 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 94/328 (28%), Positives = 139/328 (42%)
Query: 109 KRMVVSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNR 168
K + +SD+ L ++S +N + L C T G+ A NC+ L++L + +
Sbjct: 116 KSVSLSDEALAMISVRCLNLTRVKLRGCREITDLGMEDFAKNCKNLKKLSVGSCNFGA-K 174
Query: 169 GQWISCFPDSCTSLVSLNFSCLKGEINLTALERLV--ARSPNLKSLRLNRAVPLDTLQKL 226
G ++ + C L L+ L+G L L A S +L+S+ L V + L
Sbjct: 175 G--VNAMLEHCKLLEELSVKRLRGIHEAAELIHLPDDASSSSLRSICLKELVNGQVFEPL 232
Query: 227 LMRAPQLVDLGIGSFVYDPSSEAYIKLKATLVKCKSIRSLSGF----LEVVPCCLSAIHP 282
L L L I + D + K+ + KS SLS L+V LSAI
Sbjct: 233 LATTRTLKTLKIIRCLGD-----WDKVLQMIANGKS--SLSEIHLERLQVSDIGLSAISK 285
Query: 283 VCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERL----WILDSIGDRGLGVVAFTCKELQ 338
C N+ +L++ P LI + C+ L +L W + IGD GL VA C LQ
Sbjct: 286 -CSNVETLHIVKTPECSNFGLIYVAERCKLLRKLHIDGWRTNRIGDEGLLSVAKHCLNLQ 344
Query: 339 ELRVFPSGVDNAAVTEEGLVAISAGCPKLHSLLYFCQQMT--NAALITVAKNNSNFTRFR 396
EL + GV NA T L AI++ C KL L C T + + +A+ +F
Sbjct: 345 ELVLI--GV-NA--THMSLAAIASNCEKLERLA-LCGSGTIGDTEIACIARKCGALRKF- 397
Query: 397 LCILDREKPDPVTMQPLDEGFGAIVQSC 424
CI K PV+ D G A+ C
Sbjct: 398 -CI----KGCPVS----DRGIEALAVGC 416
>TAIR|locus:2825736 [details] [associations]
symbol:VFB1 "VIER F-box proteine 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
InterPro:IPR001810 PROSITE:PS50181 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC083835 GO:GO:0004842
IPI:IPI00536629 PIR:D96512 RefSeq:NP_175151.1 UniGene:At.65985
ProteinModelPortal:Q9C626 SMR:Q9C626 EnsemblPlants:AT1G47056.1
GeneID:841121 KEGG:ath:AT1G47056 TAIR:At1g47056 eggNOG:NOG240795
HOGENOM:HOG000240905 InParanoid:Q9C626 OMA:CDFGAKG PhylomeDB:Q9C626
ProtClustDB:CLSN2681910 Genevestigator:Q9C626 Uniprot:Q9C626
Length = 518
Score = 193 (73.0 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 107/408 (26%), Positives = 172/408 (42%)
Query: 6 PDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQ--SVFIGNCYAISPERVIGRFPG 63
PDE + VF F+ S +R +LVC+ W +E +R S+ + S + RF
Sbjct: 44 PDECLALVFQFLNSG-NRKRCALVCRRWMIVEGQNRYRLSLHARSDLITSIPSLFSRFDS 102
Query: 64 LKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELLS- 122
+ L+LK D EAL K + L LKR+ + C EL
Sbjct: 103 VTKLSLKCDRRSVSIG----D---------EALVK--ISLRCRNLKRLKLRA-CRELTDV 146
Query: 123 --RSFV-NFKSLVLVSCEG--FTTDGLAAIAANCRYLRELDLQEIE-VDDNRGQWISCFP 176
+F N K L + SC F G+ A+ +C L EL ++ + D + I P
Sbjct: 147 GMAAFAENCKDLKIFSCGSCDFGAKGVKAVLDHCSNLEELSIKRLRGFTDIAPEMIG--P 204
Query: 177 DSCTSLVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDL 236
S SL CLK N ++ + NLKSL+L R D LL++ D
Sbjct: 205 GVAAS--SLKSICLKELYNGQCFGPVIVGAKNLKSLKLFRCSG-DW--DLLLQEMSGKDH 259
Query: 237 GIGSFVYDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCC---LSAIHPVCQNLTSLNLS 293
G+ + + + L A + C S+ SL ++ C L+AI C+ L L++
Sbjct: 260 GVVEIHLERMQVSDVALSA-ISYCSSLESLH-LVKTPECTNFGLAAIAEKCKRLRKLHID 317
Query: 294 -YAPGIHGNE-LIKLIRFCRKLERLWILDSIGDR--GLGVVAFTCKELQELRVFPSGVDN 349
+ + G+E L+ + +FC +L+ L +L + LG++A C L+ L + G D
Sbjct: 318 GWKANLIGDEGLVAVAKFCSQLQEL-VLIGVNPTTLSLGMLAAKCLNLERLAL--CGCDT 374
Query: 350 AAVTEEGLVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRL 397
E L I+A CP L L +++ + +A T+ ++
Sbjct: 375 FGDPE--LSCIAAKCPALRKLCIKNCPISDVGIENLANGCPGLTKVKI 420
Score = 120 (47.3 bits), Expect = 0.00060, P = 0.00060
Identities = 71/318 (22%), Positives = 126/318 (39%)
Query: 102 GLEELRLKRMVVSDDCLELLSRSFVNFKSLVLVS--CE----GFTTDGLAAIAANCRYLR 155
G RL + D + + F F S+ +S C+ + L I+ CR L+
Sbjct: 75 GQNRYRLS-LHARSDLITSIPSLFSRFDSVTKLSLKCDRRSVSIGDEALVKISLRCRNLK 133
Query: 156 ELDLQEIEVDDNRGQWISCFPDSCTSLVSLNFSCLKGEINLTALERLVARSPNLKSLRLN 215
L L+ + G ++ F ++C L FSC + ++ ++ NL+ L +
Sbjct: 134 RLKLRACRELTDVG--MAAFAENCKDLKI--FSCGSCDFGAKGVKAVLDHCSNLEELSIK 189
Query: 216 RAVPLDTLQKLLMRAPQLVDLGIGSFVYDPS--SEAYIK--LKATLVKCKSIRSLSGFLE 271
R L+ AP+++ G+ + E Y +V K+++SL F
Sbjct: 190 R------LRGFTDIAPEMIGPGVAASSLKSICLKELYNGQCFGPVIVGAKNLKSLKLFR- 242
Query: 272 VVPCCLSAIHPVCQNLTSLNLSYAPGIHGNEL------IKLIRFCRKLERLWILDS--IG 323
C + Q ++ + IH + + I +C LE L ++ +
Sbjct: 243 ----CSGDWDLLLQEMSGKDHGVVE-IHLERMQVSDVALSAISYCSSLESLHLVKTPECT 297
Query: 324 DRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSLLYFCQQMTNAALI 383
+ GL +A CK L++L + G + +EGLVA++ C +L L+ T +L
Sbjct: 298 NFGLAAIAEKCKRLRKLHI--DGWKANLIGDEGLVAVAKFCSQLQELVLIGVNPTTLSLG 355
Query: 384 TVAKNNSNFTRFRLCILD 401
+A N R LC D
Sbjct: 356 MLAAKCLNLERLALCGCD 373
Score = 119 (46.9 bits), Expect = 0.00077, P = 0.00077
Identities = 89/374 (23%), Positives = 148/374 (39%)
Query: 181 SLVSLNFSCLKGEINL--TALERLVARSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGI 238
S+ L+ C + +++ AL ++ R NLK L+L L + A DL I
Sbjct: 102 SVTKLSLKCDRRSVSIGDEALVKISLRCRNLKRLKLRACRELTDVGMAAF-AENCKDLKI 160
Query: 239 GSFVYDPSSEAYIK-LKATLVKCK-----SIRSLSGFLEVVPCCLSAIHP--VCQNLTSL 290
S S + K +KA L C SI+ L GF ++ P I P +L S+
Sbjct: 161 FSC---GSCDFGAKGVKAVLDHCSNLEELSIKRLRGFTDIAP---EMIGPGVAASSLKSI 214
Query: 291 NLSYAPGIHGNELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGVDNA 350
L +G +I + L+ L + GD L + + K+ + + ++
Sbjct: 215 CLKEL--YNGQCFGPVIVGAKNLKSLKLFRCSGDWDLLLQEMSGKDHGVVEIH---LERM 269
Query: 351 AVTEEGLVAISAGCPKLHSL-LYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVT 409
V++ L AIS C L SL L + TN L +A+ R R +D K + +
Sbjct: 270 QVSDVALSAISY-CSSLESLHLVKTPECTNFGLAAIAEKCK---RLRKLHIDGWKANLIG 325
Query: 410 MQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQ-LEMLSIAFAGNS---DKG 465
DEG A+ + C + L +GM A + L + +A G D
Sbjct: 326 ----DEGLVAVAKFCSQLQELVLIG--VNPTTLSLGMLAAKCLNLERLALCGCDTFGDPE 379
Query: 466 MLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKM-P 524
+ + C LRKL I++ P + + + + + C+ LGGC + + P
Sbjct: 380 LSCIAAKCPALRKLCIKNCPISDVGIENLANGCPGLTKVKIKKCKGVLGGCADWLRTVRP 439
Query: 525 RLNVEIINEDDQME 538
L+V + + E
Sbjct: 440 MLSVNADTMEQEHE 453
>UNIPROTKB|F1PWK1 [details] [associations]
symbol:FBXL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016020 "membrane" evidence=IEA] [GO:0006513
"protein monoubiquitination" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0016020
GO:GO:0006511 GO:GO:0004842 GeneTree:ENSGT00700000104023
InterPro:IPR006553 SMART:SM00367 GO:GO:0006513 OMA:LTENVFG
EMBL:AAEX03013456 Ensembl:ENSCAFT00000007462 Uniprot:F1PWK1
Length = 422
Score = 190 (71.9 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 77/286 (26%), Positives = 131/286 (45%)
Query: 260 CKSIR--SLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLW 317
C ++ L+ + + L I C+NL LNLS+ I + + L+R CR L+ L
Sbjct: 128 CSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALL 187
Query: 318 I--LDSIGDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSL-LYFC 374
+ + D L + C EL L + + +T+EG+V I GC +L +L L C
Sbjct: 188 LRGCTQLEDEALKHIQNYCHELVSLNLQSC----SRITDEGVVQICRGCHRLQALCLSGC 243
Query: 375 QQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXX 434
+T+A+L +A N RL IL+ + +T D GF + ++C
Sbjct: 244 SNLTDASLTALALNCP-----RLQILEAARCSHLT----DAGFTLLARNCHDLEKMDLEE 294
Query: 435 --XXTDQVFLYIGMYAEQLEMLSIAFAGN-SDKGMLYVLN---GCKKLRKLEIRDSPFGN 488
TD + + ++ +L+ LS++ +D G+L++ N G ++LR LE+ N
Sbjct: 295 CILITDSTLIQLSVHCPKLQALSLSHCELITDDGILHLSNSTCGHERLRVLEL-----DN 349
Query: 489 TALLTDVG--KYETMRSLW---MSSCE-VTLGGCQTLAKKMPRLNV 528
L+TDV E R L + C+ VT G + + ++P + V
Sbjct: 350 CLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKV 395
Score = 151 (58.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 63/254 (24%), Positives = 110/254 (43%)
Query: 265 SLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWILD--SI 322
SL G + V L C+N+ LNL+ I + L RFC KL+ L + SI
Sbjct: 83 SLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSI 142
Query: 323 GDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSLLYF-CQQMTNAA 381
+ L ++ C+ L+ L + S D +T++G+ A+ GC L +LL C Q+ + A
Sbjct: 143 TNSSLKGISEGCRNLEYLNL--SWCDQ--ITKDGIEALVRGCRGLKALLLRGCTQLEDEA 198
Query: 382 LITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXX--XXXTDQ 439
L K+ N+ L L+ + +T DEG I + C TD
Sbjct: 199 L----KHIQNYCH-ELVSLNLQSCSRIT----DEGVVQICRGCHRLQALCLSGCSNLTDA 249
Query: 440 VFLYIGMYAEQLEMLSIAFAGN-SDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKY 498
+ + +L++L A + +D G + C L K+++ + + L + +
Sbjct: 250 SLTALALNCPRLQILEAARCSHLTDAGFTLLARNCHDLEKMDLEECILITDSTLIQLSVH 309
Query: 499 -ETMRSLWMSSCEV 511
+++L +S CE+
Sbjct: 310 CPKLQALSLSHCEL 323
>UNIPROTKB|Q9UKC9 [details] [associations]
symbol:FBXL2 "F-box/LRR-repeat protein 2" species:9606
"Homo sapiens" [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006513 "protein monoubiquitination" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0016020 "membrane"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0006464
"cellular protein modification process" evidence=TAS] [GO:0006508
"proteolysis" evidence=TAS] InterPro:IPR001810 Pfam:PF00646
PROSITE:PS50181 SMART:SM00256 GO:GO:0005737 GO:GO:0019048
GO:GO:0016020 GO:GO:0006508 GO:GO:0006511 GO:GO:0004842
InterPro:IPR006553 SMART:SM00367 GO:GO:0006513 eggNOG:NOG300245
KO:K10268 CTD:25827 HOGENOM:HOG000230659 HOVERGEN:HBG051586
OMA:LTENVFG OrthoDB:EOG4KPTB9 EMBL:AF174589 EMBL:AF176518
EMBL:AF186273 EMBL:AK001438 EMBL:AK298967 EMBL:CR457121
EMBL:AC122176 EMBL:AC123900 EMBL:BC031556 EMBL:AL049953
IPI:IPI00296850 IPI:IPI00923623 PIR:T08680 RefSeq:NP_001165184.1
RefSeq:NP_036289.3 UniGene:Hs.475872 ProteinModelPortal:Q9UKC9
SMR:Q9UKC9 IntAct:Q9UKC9 MINT:MINT-1390736 STRING:Q9UKC9
DMDM:145559475 PRIDE:Q9UKC9 DNASU:25827 Ensembl:ENST00000484457
Ensembl:ENST00000507198 GeneID:25827 KEGG:hsa:25827 UCSC:uc003cfp.3
GeneCards:GC03P033293 HGNC:HGNC:13598 MIM:605652 neXtProt:NX_Q9UKC9
PharmGKB:PA28021 InParanoid:Q9UKC9 PhylomeDB:Q9UKC9 ChiTaRS:FBXL2
GenomeRNAi:25827 NextBio:47109 ArrayExpress:Q9UKC9 Bgee:Q9UKC9
CleanEx:HS_FBXL2 Genevestigator:Q9UKC9 GermOnline:ENSG00000153558
Uniprot:Q9UKC9
Length = 423
Score = 186 (70.5 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 76/286 (26%), Positives = 130/286 (45%)
Query: 260 CKSIR--SLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLW 317
C ++ L+ + + L I C+NL LNLS+ I + + L+R CR L+ L
Sbjct: 129 CSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALL 188
Query: 318 I--LDSIGDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSL-LYFC 374
+ + D L + C EL L + + +T+EG+V I GC +L +L L C
Sbjct: 189 LRGCTQLEDEALKHIQNYCHELVSLNLQSC----SRITDEGVVQICRGCHRLQALCLSGC 244
Query: 375 QQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXX 434
+T+A+L + N RL IL+ + +T D GF + ++C
Sbjct: 245 SNLTDASLTALGLNCP-----RLQILEAARCSHLT----DAGFTLLARNCHELEKMDLEE 295
Query: 435 --XXTDQVFLYIGMYAEQLEMLSIAFAGN-SDKGMLYVLN---GCKKLRKLEIRDSPFGN 488
TD + + ++ +L+ LS++ +D G+L++ N G ++LR LE+ N
Sbjct: 296 CILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCGHERLRVLEL-----DN 350
Query: 489 TALLTDVG--KYETMRSLW---MSSCE-VTLGGCQTLAKKMPRLNV 528
L+TDV E R L + C+ VT G + + ++P + V
Sbjct: 351 CLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKV 396
Score = 158 (60.7 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 64/254 (25%), Positives = 112/254 (44%)
Query: 265 SLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWILD--SI 322
SL G + V L C+N+ LNL+ I + L RFC KL+ L + SI
Sbjct: 84 SLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSI 143
Query: 323 GDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSLLYF-CQQMTNAA 381
+ L ++ C+ L+ L + S D +T++G+ A+ GC L +LL C Q+ + A
Sbjct: 144 TNSSLKGISEGCRNLEYLNL--SWCDQ--ITKDGIEALVRGCRGLKALLLRGCTQLEDEA 199
Query: 382 LITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXX--XXXTDQ 439
L K+ N+ L L+ + +T DEG I + C TD
Sbjct: 200 L----KHIQNYCH-ELVSLNLQSCSRIT----DEGVVQICRGCHRLQALCLSGCSNLTDA 250
Query: 440 VFLYIGMYAEQLEMLSIAFAGN-SDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKY 498
+G+ +L++L A + +D G + C +L K+++ + + L + +
Sbjct: 251 SLTALGLNCPRLQILEAARCSHLTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIH 310
Query: 499 -ETMRSLWMSSCEV 511
+++L +S CE+
Sbjct: 311 CPKLQALSLSHCEL 324
>UNIPROTKB|Q5R3Z8 [details] [associations]
symbol:FBXL2 "F-box/LRR-repeat protein 2" species:9601
"Pongo abelii" [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0016020
InterPro:IPR006553 SMART:SM00367 KO:K10268 HSSP:Q13309 CTD:25827
HOGENOM:HOG000230659 HOVERGEN:HBG051586 EMBL:CR861354 EMBL:CR861462
RefSeq:NP_001127056.1 RefSeq:NP_001128909.1 UniGene:Pab.18445
UniGene:Pab.19645 ProteinModelPortal:Q5R3Z8 GeneID:100174084
GeneID:100189854 KEGG:pon:100174084 KEGG:pon:100189854
InParanoid:Q5R3Z8 Uniprot:Q5R3Z8
Length = 423
Score = 186 (70.5 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 76/286 (26%), Positives = 130/286 (45%)
Query: 260 CKSIR--SLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLW 317
C ++ L+ + + L I C+NL LNLS+ I + + L+R CR L+ L
Sbjct: 129 CSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALL 188
Query: 318 I--LDSIGDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSL-LYFC 374
+ + D L + C EL L + + +T+EG+V I GC +L +L L C
Sbjct: 189 LRGCTQLEDEALKHIQNYCHELVSLNLQSC----SRITDEGVVQICRGCHRLQALCLSGC 244
Query: 375 QQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXX 434
+T+A+L + N RL IL+ + +T D GF + ++C
Sbjct: 245 SNLTDASLTALGLNCP-----RLQILEAARCSHLT----DAGFTLLARNCHELEKMDLEE 295
Query: 435 --XXTDQVFLYIGMYAEQLEMLSIAFAGN-SDKGMLYVLN---GCKKLRKLEIRDSPFGN 488
TD + + ++ +L+ LS++ +D G+L++ N G ++LR LE+ N
Sbjct: 296 CILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCGHERLRVLEL-----DN 350
Query: 489 TALLTDVG--KYETMRSLW---MSSCE-VTLGGCQTLAKKMPRLNV 528
L+TDV E R L + C+ VT G + + ++P + V
Sbjct: 351 CLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKV 396
Score = 158 (60.7 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 64/254 (25%), Positives = 112/254 (44%)
Query: 265 SLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWILD--SI 322
SL G + V L C+N+ LNL+ I + L RFC KL+ L + SI
Sbjct: 84 SLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSI 143
Query: 323 GDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSLLYF-CQQMTNAA 381
+ L ++ C+ L+ L + S D +T++G+ A+ GC L +LL C Q+ + A
Sbjct: 144 TNSSLKGISEGCRNLEYLNL--SWCDQ--ITKDGIEALVRGCRGLKALLLRGCTQLEDEA 199
Query: 382 LITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXX--XXXTDQ 439
L K+ N+ L L+ + +T DEG I + C TD
Sbjct: 200 L----KHIQNYCH-ELVSLNLQSCSRIT----DEGVVQICRGCHRLQALCLSGCSNLTDA 250
Query: 440 VFLYIGMYAEQLEMLSIAFAGN-SDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKY 498
+G+ +L++L A + +D G + C +L K+++ + + L + +
Sbjct: 251 SLTALGLNCPRLQILEAARCSHLTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIH 310
Query: 499 -ETMRSLWMSSCEV 511
+++L +S CE+
Sbjct: 311 CPKLQALSLSHCEL 324
>RGD|1562243 [details] [associations]
symbol:Fbxl2 "F-box and leucine-rich repeat protein 2"
species:10116 "Rattus norvegicus" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0006513 "protein
monoubiquitination" evidence=IEA;ISO] [GO:0016020 "membrane"
evidence=IEA;ISO] InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256
RGD:1562243 GO:GO:0016020 GO:GO:0006511 GO:GO:0004842
GeneTree:ENSGT00700000104023 InterPro:IPR006553 SMART:SM00367
GO:GO:0006513 IPI:IPI00366732 Ensembl:ENSRNOT00000033126
NextBio:682654 Uniprot:F1M768
Length = 422
Score = 185 (70.2 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 70/281 (24%), Positives = 128/281 (45%)
Query: 260 CKSIR--SLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLW 317
C ++ L+ + V L I C+NL LNLS+ I + L+R CR L+ L
Sbjct: 128 CSKLKHLDLTSCVSVTNSSLKGISEGCRNLEYLNLSWCDQITKEGIEALVRGCRGLKALL 187
Query: 318 I--LDSIGDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSL-LYFC 374
+ + D L + C EL L + + +T++G+V I GC +L +L L C
Sbjct: 188 LRGCTQLEDEALKHIQNHCHELVSLNLQSC----SRITDDGVVQICRGCHRLQALCLSGC 243
Query: 375 QQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXX 434
+T+A+L + N RL +L+ + +T D GF + ++C
Sbjct: 244 SNLTDASLTALGLNCP-----RLQVLEAARCSHLT----DAGFTLLARNCHDLEKMDLEE 294
Query: 435 --XXTDQVFLYIGMYAEQLEMLSIAFAGN-SDKGMLYVLN---GCKKLRKLEIRDSPFGN 488
TD + + ++ +L+ LS++ +D+G+L++ + G ++LR LE+ +
Sbjct: 295 CVLITDSTLIQLSIHCPKLQALSLSHCELITDEGILHLSSSTCGHERLRVLELDNCLLVT 354
Query: 489 TALLTDVGKYETMRSLWMSSCE-VTLGGCQTLAKKMPRLNV 528
A L + + L + C+ VT G + + ++PR+ V
Sbjct: 355 DASLEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPRVKV 395
Score = 152 (58.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 63/254 (24%), Positives = 110/254 (43%)
Query: 265 SLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWILD--SI 322
SL G + V L C+N+ LNL+ I + L RFC KL+ L + S+
Sbjct: 83 SLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSV 142
Query: 323 GDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSLLYF-CQQMTNAA 381
+ L ++ C+ L+ L + S D +T+EG+ A+ GC L +LL C Q+ + A
Sbjct: 143 TNSSLKGISEGCRNLEYLNL--SWCDQ--ITKEGIEALVRGCRGLKALLLRGCTQLEDEA 198
Query: 382 LITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXX--XXXTDQ 439
L K+ N L L+ + +T D+G I + C TD
Sbjct: 199 L----KHIQNHCH-ELVSLNLQSCSRIT----DDGVVQICRGCHRLQALCLSGCSNLTDA 249
Query: 440 VFLYIGMYAEQLEMLSIAFAGN-SDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKY 498
+G+ +L++L A + +D G + C L K+++ + + L + +
Sbjct: 250 SLTALGLNCPRLQVLEAARCSHLTDAGFTLLARNCHDLEKMDLEECVLITDSTLIQLSIH 309
Query: 499 -ETMRSLWMSSCEV 511
+++L +S CE+
Sbjct: 310 CPKLQALSLSHCEL 323
Score = 127 (49.8 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 96/397 (24%), Positives = 158/397 (39%)
Query: 6 PDEVIEHVFDF---VT----SQ--KDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPER 56
P E++ +F F VT +Q K N ++L +W +++ + Q+ G +R
Sbjct: 15 PKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRVDLFNFQTDVEGRVVENISKR 74
Query: 57 VIGRFPGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMV-VSD 115
G F L+ L+L+G D +L + A++ +E L L ++D
Sbjct: 75 C-GGF--LRKLSLRGCIGVGDSSL-------------KTFAQNCRNIEHLNLNGCTKITD 118
Query: 116 DCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCF 175
LSR K L L SC T L I+ CR L L+L + G I
Sbjct: 119 STCYSLSRFCSKLKHLDLTSCVSVTNSSLKGISEGCRNLEYLNLSWCDQITKEG--IEAL 176
Query: 176 PDSCTSLVSLNFSCLKG--EINLTALERLVARSPNLKSLRLNRAVPL--DTLQKLLMRAP 231
C L +L L+G ++ AL+ + L SL L + D + ++
Sbjct: 177 VRGCRGLKAL---LLRGCTQLEDEALKHIQNHCHELVSLNLQSCSRITDDGVVQICRGCH 233
Query: 232 QLVDLGIGSFVYDPSSEAYIKLKATLVKCKSIRSLSGFL--EVVPCCLSAIHPVCQNLTS 289
+L L + S+ L A + C ++ L + + + C +L
Sbjct: 234 RLQALCLSGC----SNLTDASLTALGLNCPRLQVLEAARCSHLTDAGFTLLARNCHDLEK 289
Query: 290 LNLSYAPGIHGNELIKLIRFCRKLERLWI--LDSIGDRG-LGVVAFTCKELQELRVFPSG 346
++L I + LI+L C KL+ L + + I D G L + + TC + LRV
Sbjct: 290 MDLEECVLITDSTLIQLSIHCPKLQALSLSHCELITDEGILHLSSSTCGH-ERLRVLE-- 346
Query: 347 VDNAAVTEEGLVAISAGCPKLHSL-LYFCQQMTNAAL 382
+DN + + + C L L LY CQQ+T A +
Sbjct: 347 LDNCLLVTDASLEHLENCRGLERLELYDCQQVTRAGI 383
>TAIR|locus:2149805 [details] [associations]
symbol:AT5G01720 "AT5G01720" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS;TAS]
[GO:0009407 "toxin catabolic process" evidence=RCA] PROSITE:PS50181
EMBL:CP002688 GenomeReviews:BA000015_GR InterPro:IPR006553
SMART:SM00367 EMBL:AL161946 eggNOG:NOG300245 KO:K10268
EMBL:AY091103 EMBL:AY122938 EMBL:AK229588 EMBL:AY086589
IPI:IPI00541061 PIR:T48193 RefSeq:NP_568094.2 UniGene:At.24859
ProteinModelPortal:Q8RWU5 SMR:Q8RWU5 PRIDE:Q8RWU5
EnsemblPlants:AT5G01720.1 GeneID:831688 KEGG:ath:AT5G01720
TAIR:At5g01720 HOGENOM:HOG000244114 InParanoid:Q8RWU5 OMA:SINLSYC
PhylomeDB:Q8RWU5 ProtClustDB:CLSN2690716 Genevestigator:Q8RWU5
Uniprot:Q8RWU5
Length = 665
Score = 186 (70.5 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 103/409 (25%), Positives = 177/409 (43%)
Query: 103 LEELRLKRMV-VSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQE 161
LEEL L+ V DD L+ L + K L SC+ T GL ++ + YL+ LDL
Sbjct: 228 LEELLLEGCFGVDDDSLKSLRHDCKSLKKLDASSCQNLTHRGLTSLLSGAGYLQRLDLSH 287
Query: 162 IEVDDNRGQWISC-FPDSCTSLVSLNFSCLKG-EINLTALERLVARSPNLKSLRLNRAVP 219
IS F S + +L L G + L+ + +LK + L++ V
Sbjct: 288 CS------SVISLDFASSLKKVSALQSIRLDGCSVTPDGLKAIGTLCNSLKEVSLSKCVS 341
Query: 220 L--DTLQKLLMRAPQLVDLGIGSFVYDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCL 277
+ + L L+M+ L L I + S + ++ + S++ S L V
Sbjct: 342 VTDEGLSSLVMKLKDLRKLDI-TCCRKLSRVSITQIANSCPLLVSLKMESCSL-VSREAF 399
Query: 278 SAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLE--RLWILDSIGDRGLGVVAFTCK 335
I C+ L L+L+ +E +K I C L +L I +I D+GL + C
Sbjct: 400 WLIGQKCRLLEELDLT--DNEIDDEGLKSISSCLSLSSLKLGICLNITDKGLSYIGMGCS 457
Query: 336 ELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSL-LYFCQQMTNAALITVAKNNSNFTR 394
L+EL ++ S +T+ G+ I+ GC L ++ + +CQ +T+ +L++++K S
Sbjct: 458 NLRELDLYRS----VGITDVGISTIAQGCIHLETINISYCQDITDKSLVSLSKC-SLLQT 512
Query: 395 FRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXX--XXTDQVFLYIGMYAEQLE 452
F R P+ +T Q G AI CK D L + +++ L+
Sbjct: 513 FE----SRGCPN-ITSQ----GLAAIAVRCKRLAKVDLKKCPSINDAGLLALAHFSQNLK 563
Query: 453 MLSIAFAGNSDKGMLYVLN-GCKKLRKLEIRDS----PFGNTALLTDVG 496
++++ ++ G+L + N GC L+ + + +S P G A L G
Sbjct: 564 QINVSDTAVTEVGLLSLANIGC--LQNIAVVNSSGLRPSGVAAALLGCG 610
Score = 154 (59.3 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 71/254 (27%), Positives = 115/254 (45%)
Query: 130 SLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTSLVSLNFS- 188
SL + SC + + I CR L ELDL + E+DD + IS SC SL SL
Sbjct: 385 SLKMESCSLVSREAFWLIGQKCRLLEELDLTDNEIDDEGLKSIS----SCLSLSSLKLGI 440
Query: 189 CLKGEINLTALERLVARSPNLKSLRLNRAVPL-DT-LQKLLMRAPQLVDLGIGSFVYDPS 246
CL I L + NL+ L L R+V + D + + L + I S+ D +
Sbjct: 441 CLN--ITDKGLSYIGMGCSNLRELDLYRSVGITDVGISTIAQGCIHLETINI-SYCQDIT 497
Query: 247 SEAYIKLKATLVKCKSIRSLS--GFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELI 304
++ + L KC +++ G + L+AI C+ L ++L P I+ L+
Sbjct: 498 DKSLVSLS----KCSLLQTFESRGCPNITSQGLAAIAVRCKRLAKVDLKKCPSINDAGLL 553
Query: 305 KLIRFCRKLERLWILDS-IGDRGLGVVA-FTCKELQELRVFPSGVDNAAVTEEGLVAISA 362
L F + L+++ + D+ + + GL +A C LQ + V V+++ + G+ A
Sbjct: 554 ALAHFSQNLKQINVSDTAVTEVGLLSLANIGC--LQNIAV----VNSSGLRPSGVAAALL 607
Query: 363 GC-----PKLHSLL 371
GC KLH+ L
Sbjct: 608 GCGGLRKAKLHASL 621
Score = 131 (51.2 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 93/392 (23%), Positives = 161/392 (41%)
Query: 142 DGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTSL--VSLNFSCLKGEINLTAL 199
D AA+ A R L L L ++ + G I C C L VSL + G++ + L
Sbjct: 140 DADAAVVAEARSLERLKLGRCKMLTDMG--IGCIAVGCKKLNTVSLKWCVGVGDLGVGLL 197
Query: 200 ERLVARSPNLKSLRLNRAVPLD--TLQKLLMRAPQLVDLGI-GSFVYDPSSEAYIKLKAT 256
+ ++++L L+ +P+ L +L + L +L + G F D S LK+
Sbjct: 198 ---AVKCKDIRTLDLSY-LPITGKCLHDIL-KLQHLEELLLEGCFGVDDDS-----LKSL 247
Query: 257 LVKCKSIRSL--SGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLE 314
CKS++ L S + L+++ L L+LS+ + + ++ L+
Sbjct: 248 RHDCKSLKKLDASSCQNLTHRGLTSLLSGAGYLQRLDLSHCSSVISLDFASSLKKVSALQ 307
Query: 315 RLWILD--SIGDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSL-L 371
+ LD S+ GL + C L+E+ + +VT+EGL ++ L L +
Sbjct: 308 SIR-LDGCSVTPDGLKAIGTLCNSLKEVSLSKC----VSVTDEGLSSLVMKLKDLRKLDI 362
Query: 372 YFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXX 431
C++++ ++ +A N+ L L E V+ E F I Q C+
Sbjct: 363 TCCRKLSRVSITQIA-NSCPL----LVSLKMESCSLVSR----EAFWLIGQKCRLLEELD 413
Query: 432 XXXXXTDQVFLYIGMYAEQLEMLSIAFAGN-SDKGMLYVLNGCKKLRKLEIRDSPFGNTA 490
D L L L + N +DKG+ Y+ GC LR+L++ S G
Sbjct: 414 LTDNEIDDEGLKSISSCLSLSSLKLGICLNITDKGLSYIGMGCSNLRELDLYRS-VG--- 469
Query: 491 LLTDVGKYETMRSLWMSSCEVTLGGCQTLAKK 522
+TDVG T+ + + + CQ + K
Sbjct: 470 -ITDVG-ISTIAQGCIHLETINISYCQDITDK 499
>MGI|MGI:1919429 [details] [associations]
symbol:Fbxl2 "F-box and leucine-rich repeat protein 2"
species:10090 "Mus musculus" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0006513 "protein monoubiquitination" evidence=IGI;IMP]
[GO:0016020 "membrane" evidence=ISO] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 MGI:MGI:1919429 GO:GO:0016020
GO:GO:0006511 GO:GO:0004842 GeneTree:ENSGT00700000104023
InterPro:IPR006553 SMART:SM00367 GO:GO:0006513 eggNOG:NOG300245
KO:K10268 CTD:25827 HOGENOM:HOG000230659 HOVERGEN:HBG051586
OrthoDB:EOG4KPTB9 EMBL:AK039010 EMBL:AK044693 EMBL:AK045742
EMBL:AK089994 IPI:IPI00112966 RefSeq:NP_848739.1 UniGene:Mm.386808
ProteinModelPortal:Q8BH16 SMR:Q8BH16 STRING:Q8BH16 PRIDE:Q8BH16
Ensembl:ENSMUST00000035090 Ensembl:ENSMUST00000117537 GeneID:72179
KEGG:mmu:72179 InParanoid:Q8BH16 OMA:TDNTLVQ NextBio:335633
Bgee:Q8BH16 CleanEx:MM_FBXL2 Genevestigator:Q8BH16
GermOnline:ENSMUSG00000032507 Uniprot:Q8BH16
Length = 423
Score = 179 (68.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 69/281 (24%), Positives = 127/281 (45%)
Query: 260 CKSIR--SLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLW 317
C ++ L+ + V L I C+NL LNLS+ I + L+R CR L+ L
Sbjct: 129 CSKLKHLDLTSCVSVTNSSLKGISEGCRNLEYLNLSWCDQITKEGIEALVRGCRGLKALL 188
Query: 318 I--LDSIGDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSL-LYFC 374
+ + D L + C EL L + + +T++G+V I GC +L +L L C
Sbjct: 189 LRGCTQLEDEALKHIQNHCHELVSLNLQSC----SRITDDGVVQICRGCHRLQALCLSGC 244
Query: 375 QQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXX 434
+T+A+L + N RL +L+ + +T D GF + ++C
Sbjct: 245 SNLTDASLTALGLNCP-----RLQVLEAARCSHLT----DAGFTLLARNCHELEKMDLEE 295
Query: 435 --XXTDQVFLYIGMYAEQLEMLSIAFAGN-SDKGMLYVLN---GCKKLRKLEIRDSPFGN 488
TD + + ++ +L+ LS++ +D+G+L++ + G ++LR LE+ +
Sbjct: 296 CVLITDSTLVQLSIHCPKLQALSLSHCELITDEGILHLSSSTCGHERLRVLELDNCLLVT 355
Query: 489 TALLTDVGKYETMRSLWMSSCE-VTLGGCQTLAKKMPRLNV 528
A L + + L + C+ VT G + + ++P + V
Sbjct: 356 DASLEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKV 396
Score = 155 (59.6 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 63/254 (24%), Positives = 111/254 (43%)
Query: 265 SLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWILD--SI 322
SL G + V L C+N+ LNL+ I + L RFC KL+ L + S+
Sbjct: 84 SLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSV 143
Query: 323 GDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSLLYF-CQQMTNAA 381
+ L ++ C+ L+ L + S D +T+EG+ A+ GC L +LL C Q+ + A
Sbjct: 144 TNSSLKGISEGCRNLEYLNL--SWCDQ--ITKEGIEALVRGCRGLKALLLRGCTQLEDEA 199
Query: 382 LITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXX--XXXTDQ 439
L K+ N L L+ + +T D+G I + C TD
Sbjct: 200 L----KHIQNHCH-ELVSLNLQSCSRIT----DDGVVQICRGCHRLQALCLSGCSNLTDA 250
Query: 440 VFLYIGMYAEQLEMLSIAFAGN-SDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKY 498
+G+ +L++L A + +D G + C +L K+++ + + L + +
Sbjct: 251 SLTALGLNCPRLQVLEAARCSHLTDAGFTLLARNCHELEKMDLEECVLITDSTLVQLSIH 310
Query: 499 -ETMRSLWMSSCEV 511
+++L +S CE+
Sbjct: 311 CPKLQALSLSHCEL 324
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 95/397 (23%), Positives = 157/397 (39%)
Query: 6 PDEVIEHVFDF---VT----SQ--KDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPER 56
P E++ +F F VT +Q K N ++L +W +++ + Q+ G +R
Sbjct: 16 PKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRVDLFNFQTDVEGRVVENISKR 75
Query: 57 VIGRFPGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMV-VSD 115
G F L+ L+L+G D +L + A++ +E L L ++D
Sbjct: 76 C-GGF--LRKLSLRGCIGVGDSSL-------------KTFAQNCRNIEHLNLNGCTKITD 119
Query: 116 DCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCF 175
LSR K L L SC T L I+ CR L L+L + G I
Sbjct: 120 STCYSLSRFCSKLKHLDLTSCVSVTNSSLKGISEGCRNLEYLNLSWCDQITKEG--IEAL 177
Query: 176 PDSCTSLVSLNFSCLKG--EINLTALERLVARSPNLKSLRLNRAVPL--DTLQKLLMRAP 231
C L +L L+G ++ AL+ + L SL L + D + ++
Sbjct: 178 VRGCRGLKAL---LLRGCTQLEDEALKHIQNHCHELVSLNLQSCSRITDDGVVQICRGCH 234
Query: 232 QLVDLGIGSFVYDPSSEAYIKLKATLVKCKSIRSLSGFL--EVVPCCLSAIHPVCQNLTS 289
+L L + S+ L A + C ++ L + + + C L
Sbjct: 235 RLQALCLSGC----SNLTDASLTALGLNCPRLQVLEAARCSHLTDAGFTLLARNCHELEK 290
Query: 290 LNLSYAPGIHGNELIKLIRFCRKLERLWI--LDSIGDRG-LGVVAFTCKELQELRVFPSG 346
++L I + L++L C KL+ L + + I D G L + + TC + LRV
Sbjct: 291 MDLEECVLITDSTLVQLSIHCPKLQALSLSHCELITDEGILHLSSSTCGH-ERLRVLE-- 347
Query: 347 VDNAAVTEEGLVAISAGCPKLHSL-LYFCQQMTNAAL 382
+DN + + + C L L LY CQQ+T A +
Sbjct: 348 LDNCLLVTDASLEHLENCRGLERLELYDCQQVTRAGI 384
>UNIPROTKB|Q58DG6 [details] [associations]
symbol:FBXL20 "F-box/LRR-repeat protein 20" species:9913
"Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0005737
SUPFAM:SSF81383 GeneTree:ENSGT00700000104023 InterPro:IPR006553
SMART:SM00367 eggNOG:NOG300245 KO:K10268 HOGENOM:HOG000230659
HOVERGEN:HBG051586 OrthoDB:EOG4KPTB9 EMBL:BT021631 EMBL:BC133345
IPI:IPI00718197 IPI:IPI00884875 RefSeq:NP_001030268.1
UniGene:Bt.20361 ProteinModelPortal:Q58DG6 SMR:Q58DG6 PRIDE:Q58DG6
Ensembl:ENSBTAT00000011020 GeneID:511007 KEGG:bta:511007 CTD:84961
OMA:CAHDRLE NextBio:20869722 Uniprot:Q58DG6
Length = 436
Score = 176 (67.0 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 67/281 (23%), Positives = 123/281 (43%)
Query: 260 CKSIR--SLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLW 317
C +R L+ + L A+ C L LN+S+ + + + L+R C L+ L+
Sbjct: 142 CSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALF 201
Query: 318 I--LDSIGDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSLLYF-C 374
+ + D L + C EL L + +T+EGL+ I GC KL SL C
Sbjct: 202 LKGCTQLEDEALKYIGAHCPELVTLNLQTC----LQITDEGLITICRGCHKLQSLCASGC 257
Query: 375 QQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXX 434
+T+A L + +N RL IL+ + +T D GF + ++C
Sbjct: 258 SNITDAILNALGQNCP-----RLRILEVARCSQLT----DVGFTTLARNCHELEKMDLEE 308
Query: 435 --XXTDQVFLYIGMYAEQLEMLSIAFAGN-SDKGMLYVLNG-CK--KLRKLEIRDSPFGN 488
TD + + ++ +L++LS++ +D G+ ++ NG C +L +E+ + P
Sbjct: 309 CVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIELDNCPLIT 368
Query: 489 TALLTDVGKYETMRSLWMSSCE-VTLGGCQTLAKKMPRLNV 528
A L + ++ + + C+ +T G + L +P + V
Sbjct: 369 DASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKV 409
Score = 137 (53.3 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 67/280 (23%), Positives = 112/280 (40%)
Query: 265 SLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWILD--SI 322
SL G L V L C+N+ LNL+ L +FC KL L + SI
Sbjct: 97 SLRGCLGVGDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSI 156
Query: 323 GDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSL-LYFCQQMTNAA 381
+ L ++ C L++L + S D VT++G+ A+ GC L +L L C Q+ + A
Sbjct: 157 TNMSLKALSEGCPLLEQLNI--SWCDQ--VTKDGIQALVRGCGGLKALFLKGCTQLEDEA 212
Query: 382 LITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXX--XXXTDQ 439
L + + L +Q DEG I + C TD
Sbjct: 213 LKYIGAHCPELVTLNL---------QTCLQITDEGLITICRGCHKLQSLCASGCSNITDA 263
Query: 440 VFLYIGMYAEQLEMLSIAFAGN-SDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKY 498
+ +G +L +L +A +D G + C +L K+++ + + L + +
Sbjct: 264 ILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIH 323
Query: 499 -ETMRSLWMSSCE-VTLGGCQTLAK-KMPRLNVEIINEDD 535
++ L +S CE +T G + L +E+I D+
Sbjct: 324 CPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIELDN 363
>UNIPROTKB|Q96IG2 [details] [associations]
symbol:FBXL20 "F-box/LRR-repeat protein 20" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0005737
SUPFAM:SSF81383 InterPro:IPR006553 SMART:SM00367 eggNOG:NOG300245
KO:K10268 HOGENOM:HOG000230659 HOVERGEN:HBG051586 OrthoDB:EOG4KPTB9
CTD:84961 OMA:CAHDRLE EMBL:DQ223959 EMBL:AK291844 EMBL:BC007557
IPI:IPI00174757 IPI:IPI00655936 RefSeq:NP_001171835.1
RefSeq:NP_116264.2 UniGene:Hs.462946 ProteinModelPortal:Q96IG2
SMR:Q96IG2 STRING:Q96IG2 PhosphoSite:Q96IG2 DMDM:38503141
PaxDb:Q96IG2 PRIDE:Q96IG2 DNASU:84961 Ensembl:ENST00000264658
Ensembl:ENST00000394294 Ensembl:ENST00000583610 GeneID:84961
KEGG:hsa:84961 UCSC:uc002hrt.3 UCSC:uc010cvu.3
GeneCards:GC17M037409 HGNC:HGNC:24679 MIM:609086 neXtProt:NX_Q96IG2
PharmGKB:PA134976410 InParanoid:Q96IG2 PhylomeDB:Q96IG2
GenomeRNAi:84961 NextBio:75475 Bgee:Q96IG2 CleanEx:HS_FBXL20
Genevestigator:Q96IG2 GermOnline:ENSG00000108306 Uniprot:Q96IG2
Length = 436
Score = 176 (67.0 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 67/281 (23%), Positives = 123/281 (43%)
Query: 260 CKSIR--SLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLW 317
C +R L+ + L A+ C L LN+S+ + + + L+R C L+ L+
Sbjct: 142 CSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALF 201
Query: 318 I--LDSIGDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSLLYF-C 374
+ + D L + C EL L + +T+EGL+ I GC KL SL C
Sbjct: 202 LKGCTQLEDEALKYIGAHCPELVTLNLQTC----LQITDEGLITICRGCHKLQSLCASGC 257
Query: 375 QQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXX 434
+T+A L + +N RL IL+ + +T D GF + ++C
Sbjct: 258 SNITDAILNALGQNCP-----RLRILEVARCSQLT----DVGFTTLARNCHELEKMDLEE 308
Query: 435 --XXTDQVFLYIGMYAEQLEMLSIAFAGN-SDKGMLYVLNG-CK--KLRKLEIRDSPFGN 488
TD + + ++ +L++LS++ +D G+ ++ NG C +L +E+ + P
Sbjct: 309 CVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIELDNCPLIT 368
Query: 489 TALLTDVGKYETMRSLWMSSCE-VTLGGCQTLAKKMPRLNV 528
A L + ++ + + C+ +T G + L +P + V
Sbjct: 369 DASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKV 409
Score = 137 (53.3 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 67/280 (23%), Positives = 112/280 (40%)
Query: 265 SLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWILD--SI 322
SL G L V L C+N+ LNL+ L +FC KL L + SI
Sbjct: 97 SLRGCLGVGDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSI 156
Query: 323 GDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSL-LYFCQQMTNAA 381
+ L ++ C L++L + S D VT++G+ A+ GC L +L L C Q+ + A
Sbjct: 157 TNMSLKALSEGCPLLEQLNI--SWCDQ--VTKDGIQALVRGCGGLKALFLKGCTQLEDEA 212
Query: 382 LITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXX--XXXTDQ 439
L + + L +Q DEG I + C TD
Sbjct: 213 LKYIGAHCPELVTLNL---------QTCLQITDEGLITICRGCHKLQSLCASGCSNITDA 263
Query: 440 VFLYIGMYAEQLEMLSIAFAGN-SDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKY 498
+ +G +L +L +A +D G + C +L K+++ + + L + +
Sbjct: 264 ILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIH 323
Query: 499 -ETMRSLWMSSCE-VTLGGCQTLAK-KMPRLNVEIINEDD 535
++ L +S CE +T G + L +E+I D+
Sbjct: 324 CPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIELDN 363
>MGI|MGI:1919444 [details] [associations]
symbol:Fbxl20 "F-box and leucine-rich repeat protein 20"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 MGI:MGI:1919444 GO:GO:0005737
SUPFAM:SSF81383 GeneTree:ENSGT00700000104023 InterPro:IPR006553
SMART:SM00367 EMBL:AL591209 EMBL:AL591205 eggNOG:NOG300245
KO:K10268 HOGENOM:HOG000230659 HOVERGEN:HBG051586 OrthoDB:EOG4KPTB9
CTD:84961 OMA:CAHDRLE EMBL:EF649694 EMBL:AK012109 EMBL:AK036217
EMBL:AK144786 EMBL:AK220232 IPI:IPI00605645 IPI:IPI00874641
IPI:IPI00954305 RefSeq:NP_082425.1 UniGene:Mm.218350
ProteinModelPortal:Q9CZV8 SMR:Q9CZV8 IntAct:Q9CZV8 STRING:Q9CZV8
PhosphoSite:Q9CZV8 PaxDb:Q9CZV8 PRIDE:Q9CZV8
Ensembl:ENSMUST00000103143 GeneID:72194 KEGG:mmu:72194
UCSC:uc007lfm.1 UCSC:uc009vah.1 InParanoid:Q9CZV8 NextBio:335667
Bgee:Q9CZV8 CleanEx:MM_FBXL20 Genevestigator:Q9CZV8
GermOnline:ENSMUSG00000020883 Uniprot:Q9CZV8
Length = 436
Score = 176 (67.0 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 67/281 (23%), Positives = 123/281 (43%)
Query: 260 CKSIR--SLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLW 317
C +R L+ + L A+ C L LN+S+ + + + L+R C L+ L+
Sbjct: 142 CSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALF 201
Query: 318 I--LDSIGDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSLLYF-C 374
+ + D L + C EL L + +T+EGL+ I GC KL SL C
Sbjct: 202 LKGCTQLEDEALKYIGAHCPELVTLNLQTC----LQITDEGLITICRGCHKLQSLCASGC 257
Query: 375 QQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXX 434
+T+A L + +N RL IL+ + +T D GF + ++C
Sbjct: 258 SNITDAILNALGQNCP-----RLRILEVARCSQLT----DVGFTTLARNCHELEKMDLEE 308
Query: 435 --XXTDQVFLYIGMYAEQLEMLSIAFAGN-SDKGMLYVLNG-CK--KLRKLEIRDSPFGN 488
TD + + ++ +L++LS++ +D G+ ++ NG C +L +E+ + P
Sbjct: 309 CVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIELDNCPLIT 368
Query: 489 TALLTDVGKYETMRSLWMSSCE-VTLGGCQTLAKKMPRLNV 528
A L + ++ + + C+ +T G + L +P + V
Sbjct: 369 DASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKV 409
>TAIR|locus:2143320 [details] [associations]
symbol:AT5G27920 "AT5G27920" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009407 "toxin catabolic
process" evidence=RCA] EMBL:CP002688 GenomeReviews:BA000015_GR
InterPro:IPR006553 SMART:SM00367 KO:K10268 HOGENOM:HOG000244114
EMBL:BT005940 EMBL:AK117239 IPI:IPI00538711 RefSeq:NP_568502.1
UniGene:At.30778 ProteinModelPortal:Q8GZ31 SMR:Q8GZ31
EnsemblPlants:AT5G27920.1 GeneID:832858 KEGG:ath:AT5G27920
TAIR:At5g27920 InParanoid:Q8GZ31 OMA:GFWALAY PhylomeDB:Q8GZ31
ProtClustDB:CLSN2689880 Genevestigator:Q8GZ31 Uniprot:Q8GZ31
Length = 642
Score = 158 (60.7 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 103/435 (23%), Positives = 194/435 (44%)
Query: 97 AKSRVGLEELRLKRMV-VSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLR 155
A S +G++ L L R V LE L+R + + + C GF D AA ++ LR
Sbjct: 91 AISTLGIKSLNLSRSTAVRARGLETLARMCHALERVDVSHCWGFG-DREAAALSSATGLR 149
Query: 156 ELDLQEIEVDDNRGQWISCFPDSCTSL--VSLNFSCLKGEINLTALERLVARSPNLKSLR 213
EL + + + G ++ C++L +SL + C+ EI+ ++ L LKSL
Sbjct: 150 ELKMDKCLSLSDVG--LARIVVGCSNLNKISLKW-CM--EISDLGIDLLCKICKGLKSLD 204
Query: 214 LNRA-VPLDTLQKL-LMRAPQLVDLGIGSFVYDPSSEAYIKLKATLVKCKSIRSLSGFLE 271
++ + D+++ + L+ +++D+ + D + +L + R L
Sbjct: 205 VSYLKITNDSIRSIALLVKLEVLDMVSCPLIDDGGLQFLENGSPSLQEVDVTRCDRVSLS 264
Query: 272 VVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWILDS-IGDRGLGVV 330
+ + HP ++ L S+ +K I+ + L+ +WI + + D L +
Sbjct: 265 GLISIVRG-HP---DIQLLKASHCVSEVSGSFLKYIKGLKHLKTIWIDGAHVSDSSLVSL 320
Query: 331 AFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSL-LYFCQQMTNAALITVAKNN 389
+ +C+ L E+ + VD VT+ G+++++ C L +L L C +T+ A+ VA++
Sbjct: 321 SSSCRSLMEIGLSRC-VD---VTDIGMISLARNCLNLKTLNLACCGFVTDVAISAVAQSC 376
Query: 390 SNFTRFRL--CILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMY 447
N +L C L EK +Q L + +VQ D+ YI
Sbjct: 377 RNLGTLKLESCHLITEKG----LQSLG-CYSMLVQELDLTDCYGV----NDRGLEYISK- 426
Query: 448 AEQLEMLSIAFAGN-SDKGMLYVLNGCKKLRKLEI-RDSPFGNTALLTDVGKYETMRSLW 505
L+ L + N SDKG+ ++ + C KL +L++ R + FG+ L +++ L
Sbjct: 427 CSNLQRLKLGLCTNISDKGIFHIGSKCSKLLELDLYRCAGFGDDGLAALSRGCKSLNRLI 486
Query: 506 MS-SCEVTLGGCQTL 519
+S CE+T G + +
Sbjct: 487 LSYCCELTDTGVEQI 501
Score = 142 (55.0 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 71/268 (26%), Positives = 126/268 (47%)
Query: 95 ALAKSRVGLEELRLKRMV-VSDDCLELLSRSFVNFKSLVLVSCEGFTTD-GLAAIAANCR 152
+L+ S L E+ L R V V+D + L+R+ +N K+L L C GF TD ++A+A +CR
Sbjct: 319 SLSSSCRSLMEIGLSRCVDVTDIGMISLARNCLNLKTLNLACC-GFVTDVAISAVAQSCR 377
Query: 153 YLRELDLQEIEVDDNRG-QWISCFPDSCTSLVS-LNFSCLKGEINLTALERLVARSPNLK 210
L L L+ + +G Q + C+ + LV L+ + G +N LE +++ NL+
Sbjct: 378 NLGTLKLESCHLITEKGLQSLGCY----SMLVQELDLTDCYG-VNDRGLE-YISKCSNLQ 431
Query: 211 SLRLNRAVPLDT--LQKLLMRAPQLVDLGIGSFVYDPSSEAYIKLKATLVKCKSIRSL-- 266
L+L + + + + +L++L + Y + L A CKS+ L
Sbjct: 432 RLKLGLCTNISDKGIFHIGSKCSKLLELDL----YRCAGFGDDGLAALSRGCKSLNRLIL 487
Query: 267 SGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWI--LDSIGD 324
S E+ + I + + L+ L L I G L + C+KL L + ++I D
Sbjct: 488 SYCCELTDTGVEQIRQL-ELLSHLELRGLKNITGVGLAAIASGCKKLGYLDVKLCENIDD 546
Query: 325 RGLGVVAFTCKELQELRVFPSGVDNAAV 352
G +A+ K L+++ + V + A+
Sbjct: 547 SGFWALAYFSKNLRQINLCNCSVSDTAL 574
>UNIPROTKB|A6H779 [details] [associations]
symbol:FBXL2 "F-box/LRR-repeat protein 2" species:9913 "Bos
taurus" [GO:0016020 "membrane" evidence=ISS] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 GO:GO:0016020 GO:GO:0006511
GO:GO:0004842 GeneTree:ENSGT00700000104023 InterPro:IPR006553
SMART:SM00367 GO:GO:0006513 eggNOG:NOG300245 KO:K10268
EMBL:BC146145 IPI:IPI00854546 RefSeq:NP_001092623.1
UniGene:Bt.54599 Ensembl:ENSBTAT00000005160 GeneID:616212
KEGG:bta:616212 CTD:25827 HOGENOM:HOG000230659 HOVERGEN:HBG051586
InParanoid:A6H779 OMA:LTENVFG OrthoDB:EOG4KPTB9 NextBio:20900019
Uniprot:A6H779
Length = 423
Score = 150 (57.9 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 63/254 (24%), Positives = 110/254 (43%)
Query: 265 SLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWILD--SI 322
SL G + V L C+N+ LNL+ I + L RFC KL+ L + SI
Sbjct: 84 SLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSI 143
Query: 323 GDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSLLYF-CQQMTNAA 381
+ L ++ C+ L+ L + S D +T++G+ A+ GC L +LL C Q+ + A
Sbjct: 144 TNSSLKGISEGCRHLEYLNL--SWCDQ--ITKDGVEALVRGCRGLRALLLRGCTQLEDEA 199
Query: 382 LITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXX--XXTDQ 439
L K+ N+ L L+ + VT D+G + + C TD
Sbjct: 200 L----KHIQNYCH-ELVSLNLQSCSRVT----DDGVVQLCRGCPRLQALCLSGCGSLTDA 250
Query: 440 VFLYIGMYAEQLEMLSIAFAGN-SDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKY 498
+ + +L++L A + +D G + C L K+++ + LT + +
Sbjct: 251 SLTALALNCPRLQILEAARCSHLTDAGFTLLARNCHDLEKMDLEECILITDRTLTQLSIH 310
Query: 499 -ETMRSLWMSSCEV 511
+++L +S CE+
Sbjct: 311 CPKLQALSLSHCEL 324
Score = 123 (48.4 bits), Expect = 0.00021, P = 0.00021
Identities = 103/401 (25%), Positives = 160/401 (39%)
Query: 6 PDEVIEHVFDF---VT----SQ--KDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPER 56
P E++ +F F VT +Q K N ++L +W +I+ + Q+ G +R
Sbjct: 16 PKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDLFNFQTDVEGRVVENISKR 75
Query: 57 VIGRFPGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMV-VSD 115
G F L+ L+L+G D +L + A++ +E L L ++D
Sbjct: 76 C-GGF--LRKLSLRGCIGVGDSSL-------------KTFAQNCRNIEHLNLNGCTKITD 119
Query: 116 DCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCF 175
LSR K L L SC T L I+ CR+L L+L + G +
Sbjct: 120 STCYSLSRFCSKLKHLDLTSCVSITNSSLKGISEGCRHLEYLNLSWCDQITKDG--VEAL 177
Query: 176 PDSCTSLVSLNFSCLKG--EINLTALERLVARSPNLKSLRLNRA--VPLDTLQKLLMRAP 231
C L +L L+G ++ AL+ + L SL L V D + +L P
Sbjct: 178 VRGCRGLRAL---LLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRVTDDGVVQLCRGCP 234
Query: 232 QLVDL---GIGSFVYDPSSEAYIKLKATLVKCKSIRSLSGFL--EVVPCCLSAIHPVCQN 286
+L L G GS D S L A + C ++ L + + + C +
Sbjct: 235 RLQALCLSGCGSLT-DAS------LTALALNCPRLQILEAARCSHLTDAGFTLLARNCHD 287
Query: 287 LTSLNLSYAPGIHGNELIKLIRFCRKLERLWI--LDSIGDRG-LGVVAFTCKELQELRVF 343
L ++L I L +L C KL+ L + + I D G L + C + LRV
Sbjct: 288 LEKMDLEECILITDRTLTQLSIHCPKLQALSLSHCELITDDGILHLSNSPCGH-ERLRVL 346
Query: 344 PSGVDNAA-VTEEGLVAISAGCPKLHSL-LYFCQQMTNAAL 382
+DN +T+ L + C L L LY CQQ+T A +
Sbjct: 347 E--LDNCLLITDVALEHLEH-CRGLERLELYDCQQVTRAGI 384
>WB|WBGene00015350 [details] [associations]
symbol:C02F5.7 species:6239 "Caenorhabditis elegans"
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256
GO:GO:0071688 GeneTree:ENSGT00700000104023 InterPro:IPR006553
SMART:SM00367 EMBL:FO080288 eggNOG:NOG300245 KO:K10268
HOGENOM:HOG000230659 OMA:LTENVFG PIR:G88523 PIR:S44609
RefSeq:NP_741248.1 RefSeq:NP_741249.1 ProteinModelPortal:P34284
SMR:P34284 IntAct:P34284 MINT:MINT-227871 STRING:P34284
PaxDb:P34284 PRIDE:P34284 EnsemblMetazoa:C02F5.7b.1
EnsemblMetazoa:C02F5.7b.2 GeneID:3564805 KEGG:cel:CELE_C02F5.7
UCSC:C02F5.7a.1 CTD:3564805 WormBase:C02F5.7a WormBase:C02F5.7b
InParanoid:P34284 NextBio:954051 Uniprot:P34284
Length = 466
Score = 150 (57.9 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 69/276 (25%), Positives = 115/276 (41%)
Query: 265 SLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWI--LDSI 322
SL G V L C NL L+L + L R+C KL L + SI
Sbjct: 129 SLKGCENVHDSALRTFTSRCPNLEHLSLYRCKRVTDASCENLGRYCHKLNYLNLENCSSI 188
Query: 323 GDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSL-LYFCQQMTNAA 381
DR + + C L L + S D A+ + G+ I + C L +L L C+ +T
Sbjct: 189 TDRAMKYIGDGCPNLSYLNI--SWCD--AIQDRGVQIILSNCKSLDTLILRGCEGLTENV 244
Query: 382 LITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVF 441
+V + + L L + +T+Q + G A+ C +D+
Sbjct: 245 FGSVEAHMGAIKKLNL--LQCFQLTDITVQNIANGATALEYLCMSNCNQI-----SDRSL 297
Query: 442 LYIGMYAEQLEMLSIAFAGN-SDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKYET 500
+ +G ++ L++L ++ D G + + GC++L +L++ D + + + T
Sbjct: 298 VSLGQHSHNLKVLELSGCTLLGDNGFIPLARGCRQLERLDMEDCSLISDHTINSLANNCT 357
Query: 501 -MRSLWMSSCE-VTLGGCQTLAKK-MPRLNV-EIIN 532
+R L +S CE +T Q LA K LNV E+ N
Sbjct: 358 ALRELSLSHCELITDESIQNLASKHRETLNVLELDN 393
Score = 123 (48.4 bits), Expect = 0.00024, P = 0.00024
Identities = 80/309 (25%), Positives = 134/309 (43%)
Query: 93 VEALAKSRVG-LEELRLKRMV-VSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAAN 150
VE LA+ G L+EL LK V D L + N + L L C+ T +
Sbjct: 114 VENLARRCGGFLKELSLKGCENVHDSALRTFTSRCPNLEHLSLYRCKRVTDASCENLGRY 173
Query: 151 CRYLRELDLQEIE-VDDNRGQWISCFPDSCTSLVSLNFS-CL----KG-EI---NLTALE 200
C L L+L+ + D ++I D C +L LN S C +G +I N +L+
Sbjct: 174 CHKLNYLNLENCSSITDRAMKYIG---DGCPNLSYLNISWCDAIQDRGVQIILSNCKSLD 230
Query: 201 RLVARSPNLKSLRLNRAVP--LDTLQKL-LMRAPQLVDLGIGSFVYDPSSEAYIKLKATL 257
L+ R + + +V + ++KL L++ QL D+ + + ++ Y+ +
Sbjct: 231 TLILRGCEGLTENVFGSVEAHMGAIKKLNLLQCFQLTDITVQNIANGATALEYLCMS--- 287
Query: 258 VKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLW 317
C I S L ++ NL L LS + N I L R CR+LERL
Sbjct: 288 -NCNQISDRS---------LVSLGQHSHNLKVLELSGCTLLGDNGFIPLARGCRQLERLD 337
Query: 318 ILDS--IGDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSLLYF-- 373
+ D I D + +A C L+EL + S + +T+E + +++ + ++L
Sbjct: 338 MEDCSLISDHTINSLANNCTALRELSL--SHCE--LITDESIQNLASKHRETLNVLELDN 393
Query: 374 CQQMTNAAL 382
C Q+T++ L
Sbjct: 394 CPQLTDSTL 402
>UNIPROTKB|F1NHD2 [details] [associations]
symbol:FBXL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006513 "protein monoubiquitination"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0016020
GO:GO:0006511 GO:GO:0004842 GeneTree:ENSGT00700000104023
InterPro:IPR006553 SMART:SM00367 GO:GO:0006513 OMA:LTENVFG
EMBL:AADN02001289 IPI:IPI00581819 Ensembl:ENSGALT00000019534
Uniprot:F1NHD2
Length = 423
Score = 148 (57.2 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 63/254 (24%), Positives = 110/254 (43%)
Query: 265 SLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWILD--SI 322
SL G V L C+N+ LNL+ I + L RFC KL+ L + +I
Sbjct: 84 SLRGCHVVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVAI 143
Query: 323 GDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSL-LYFCQQMTNAA 381
+ L ++ C+ L+ L + S D +T++G+ A+ GC L +L L C Q+ + A
Sbjct: 144 TNSSLKGLSEGCRNLEHLNL--SWCDQ--ITKDGIEALVKGCSGLKALFLRGCTQLEDEA 199
Query: 382 LITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXX--XXTDQ 439
L K+ N L IL+ + ++ DEG I + C TD
Sbjct: 200 L----KHIQNHCH-ELAILNLQSCTQIS----DEGIVKICRGCHRLQSLCVSGCCNLTDA 250
Query: 440 VFLYIGMYAEQLEMLSIAFAGN-SDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKY 498
+G+ +L++L A +D G + C +L K+++ + + L + +
Sbjct: 251 SLTALGLNCPRLKILEAARCSQLTDAGFTLLARNCHELEKMDLEECVLITDSTLIQLSIH 310
Query: 499 -ETMRSLWMSSCEV 511
+++L +S CE+
Sbjct: 311 CPKLQALSLSHCEL 324
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 94/397 (23%), Positives = 159/397 (40%)
Query: 6 PDEVIEHVFDF---VT----SQKDR--NAVSLVCKSWYKIERLSRQSVFIGNCYAISPER 56
P E++ +F F VT +Q + N ++L +W KI+ + Q+ G +R
Sbjct: 16 PKELLLRIFSFLDIVTLCRCAQVSKAWNVLALDGSNWQKIDLFNFQTDIEGRVVENISKR 75
Query: 57 VIGRFPGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMV-VSD 115
G F L+ L+L+G D +L + A++ +E L L ++D
Sbjct: 76 C-GGF--LRQLSLRGCHVVGDSSL-------------KTFAQNCRNIEHLNLNGCTKITD 119
Query: 116 DCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCF 175
LSR K L L SC T L ++ CR L L+L + G I
Sbjct: 120 STCYSLSRFCSKLKHLDLTSCVAITNSSLKGLSEGCRNLEHLNLSWCDQITKDG--IEAL 177
Query: 176 PDSCTSLVSLNFSCLKG--EINLTALERLVARSPNLKSLRLNRAVPL--DTLQKLLMRAP 231
C+ L +L F L+G ++ AL+ + L L L + + + K+
Sbjct: 178 VKGCSGLKAL-F--LRGCTQLEDEALKHIQNHCHELAILNLQSCTQISDEGIVKICRGCH 234
Query: 232 QLVDLGIGSFVYDPSSEAYIKLKATLVKCKSIRSLSGFL--EVVPCCLSAIHPVCQNLTS 289
+L L + ++A L A + C ++ L ++ + + C L
Sbjct: 235 RLQSLCVSGCCN--LTDA--SLTALGLNCPRLKILEAARCSQLTDAGFTLLARNCHELEK 290
Query: 290 LNLSYAPGIHGNELIKLIRFCRKLERLWI--LDSIGDRG-LGVVAFTCKELQELRVFPSG 346
++L I + LI+L C KL+ L + + I D G L + TC + L+V
Sbjct: 291 MDLEECVLITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCGH-ERLQVLE-- 347
Query: 347 VDNAAVTEEGLVAISAGCPKLHSL-LYFCQQMTNAAL 382
+DN + + + C L + LY CQQ+T A +
Sbjct: 348 LDNCLLITDVTLEHLENCHNLERIELYDCQQVTRAGI 384
>TAIR|locus:2025222 [details] [associations]
symbol:SKP2B "AT1G77000" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0010286 "heat acclimation" evidence=IEP;RCA] [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IMP] [GO:1901332 "negative regulation of lateral root
development" evidence=IMP] InterPro:IPR001810 Pfam:PF00646
PROSITE:PS50181 EMBL:CP002684 GenomeReviews:CT485782_GR
EMBL:AC002291 InterPro:IPR006553 SMART:SM00367 GO:GO:0010286
GO:GO:0051603 eggNOG:NOG257455 HOGENOM:HOG000238537
ProtClustDB:CLSN2687892 EMBL:BT024747 EMBL:AY087441 EMBL:AK117866
EMBL:AK175607 EMBL:AK175925 IPI:IPI00520157 PIR:A96799
RefSeq:NP_001185415.1 RefSeq:NP_565147.1 UniGene:At.28008
ProteinModelPortal:O49286 SMR:O49286 STRING:O49286
EnsemblPlants:AT1G77000.1 EnsemblPlants:AT1G77000.2 GeneID:844036
KEGG:ath:AT1G77000 TAIR:At1g77000 InParanoid:O49286 KO:K03875
OMA:VALANRC PhylomeDB:O49286 Genevestigator:O49286 GO:GO:1901332
Uniprot:O49286
Length = 360
Score = 143 (55.4 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 52/185 (28%), Positives = 89/185 (48%)
Query: 208 NLKSLRLNRAVPLDTLQKLLMRA--PQLVDLGIGSFVYDPSSEAYIKLKATLVKCKSIRS 265
N+ SL L+ A LQ L++R PQL D + + ++ + L K I
Sbjct: 77 NMNSLVLSLAPKFVKLQTLVLRQDKPQLEDNAVEAI----ANHCHELQDLDLSKSSKITD 132
Query: 266 LSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWI---LDSI 322
S L ++ C NLT LNLS L L RFCRKL+ L + ++++
Sbjct: 133 HS---------LYSLARGCTNLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAV 183
Query: 323 GDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSL-LYFCQQMTNAA 381
D L + C +LQ L + +N ++++G+++++ GCP L +L L C +T+ +
Sbjct: 184 SDNTLQAIGENCNQLQSLNL--GWCEN--ISDDGVMSLAYGCPDLRTLDLCSCVLITDES 239
Query: 382 LITVA 386
++ +A
Sbjct: 240 VVALA 244
Score = 116 (45.9 bits), Expect = 0.00091, P = 0.00091
Identities = 65/249 (26%), Positives = 105/249 (42%)
Query: 1 MMNYFPDEVIEHVFDFVTSQKDRNAV--SLVCKSWYKIERLSRQSVFIGNCYAISPERVI 58
+++ + D +E + + DR + S +C W L + + C V+
Sbjct: 24 LISEWKDIPVELLMKILNLVDDRTVIIASCICSGWRDAVSLGLTRLSLSWCKKNMNSLVL 83
Query: 59 G---RFPGLKSLTLK-GKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRL-KRMVV 113
+F L++L L+ KP D N VEA+A L++L L K +
Sbjct: 84 SLAPKFVKLQTLVLRQDKPQLED-NA------------VEAIANHCHELQDLDLSKSSKI 130
Query: 114 SDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQE-IE-VDDNRGQW 171
+D L L+R N L L C F+ LA + CR L+ L+L +E V DN Q
Sbjct: 131 TDHSLYSLARGCTNLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQA 190
Query: 172 ISCFPDSCTSLVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPL--DTLQKLLMR 229
I ++C L SLN + I+ + L P+L++L L V + +++ L R
Sbjct: 191 IG---ENCNQLQSLNLGWCEN-ISDDGVMSLAYGCPDLRTLDLCSCVLITDESVVALANR 246
Query: 230 APQLVDLGI 238
L LG+
Sbjct: 247 CIHLRSLGL 255
>TAIR|locus:2083143 [details] [associations]
symbol:VFB2 "AT3G50080" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001810
Pfam:PF00646 PROSITE:PS50181 SMART:SM00256 GO:GO:0005737
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF81383
GO:GO:0004842 EMBL:AL132978 HOGENOM:HOG000240905
ProtClustDB:CLSN2681910 EMBL:BX822976 IPI:IPI00528697 PIR:T45861
RefSeq:NP_566928.1 UniGene:At.35535 ProteinModelPortal:Q9SN10
SMR:Q9SN10 PRIDE:Q9SN10 EnsemblPlants:AT3G50080.1 GeneID:824170
KEGG:ath:AT3G50080 TAIR:At3g50080 eggNOG:NOG306575
InParanoid:Q9SN10 OMA:CESIGFE PhylomeDB:Q9SN10
Genevestigator:Q9SN10 Uniprot:Q9SN10
Length = 522
Score = 144 (55.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 80/296 (27%), Positives = 128/296 (43%)
Query: 113 VSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWI 172
+SD+ L ++S N + L C T G+ + A NC+ LR+L +G I
Sbjct: 118 LSDEALFIVSIRCSNLIRVKLRGCREITDLGMESFARNCKSLRKLSCGSCTFGA-KG--I 174
Query: 173 SCFPDSCTSLVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLM-RAP 231
+ + C L L+ ++G L +L + S +L+S+ L V L+ R
Sbjct: 175 NAMLEHCKVLEELSLKRIRGLHELAEPIKL-SLSASLRSVFLKELVNGQVFGSLVATRTL 233
Query: 232 QLVDL--GIGSFVYDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTS 289
+ V + +G+ +D E ++L + + R L+V L I C NL +
Sbjct: 234 KKVKIIRCLGN--WDRVFEMNGNGNSSLTEIRLER-----LQVTDIGLFGISK-CSNLET 285
Query: 290 LNLSYAPGIHGNELIKLIRFCRKLERL----WILDSIGDRGLGVVAFTCKELQELRVFPS 345
L++ P L ++ C+ L +L W + IGD+GL VA C LQEL +
Sbjct: 286 LHIVKTPDCSNLGLASVVERCKLLRKLHIDGWRVKRIGDQGLMSVAKHCLNLQELVLI-- 343
Query: 346 GVDNAAVTEEGLVAISAGCPKLHSLLYFCQQMT--NAALITVAKNNSNFTRFRLCI 399
GVD T L AI++ C KL L C T +A + +A+ +F CI
Sbjct: 344 GVD---ATYMSLSAIASNCKKLERLA-LCGSGTIGDAEIGCIAEKCVTLRKF--CI 393
Score = 142 (55.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 89/389 (22%), Positives = 159/389 (40%)
Query: 6 PDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISP--ERVIGRFPG 63
PD+ + H+F F+ S DR SLV K W ++ +R + + I P + RF
Sbjct: 45 PDDCLAHIFQFL-SAGDRKRCSLVSKRWLLVDGQNRHRLSLDAKSEILPFLPCIFNRFDS 103
Query: 64 LKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELLSR 123
+ L L+ F+L D ++ + RV L R ++D +E +R
Sbjct: 104 VTKLALRCDRR--SFSLS--DEALFIVS-IRCSNLIRVKLRGCR----EITDLGMESFAR 154
Query: 124 SFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTSLV 183
+ + + L SC F G+ A+ +C+ L EL L+ I + I + V
Sbjct: 155 NCKSLRKLSCGSCT-FGAKGINAMLEHCKVLEELSLKRIRGLHELAEPIKLSLSASLRSV 213
Query: 184 SLNFSCLKGEINLTALERLVARSPNLKSL-RLNRAVPLD-----TLQKLLMRAPQLVDLG 237
L R + + ++ L +R ++ +L ++ + Q+ D+G
Sbjct: 214 FLKELVNGQVFGSLVATRTLKKVKIIRCLGNWDRVFEMNGNGNSSLTEIRLERLQVTDIG 273
Query: 238 IGSFVYDPSSEAY--IK--------LKATLVKCKSIRSL--SGFL--EVVPCCLSAIHPV 283
+ + E +K L + + +CK +R L G+ + L ++
Sbjct: 274 LFGISKCSNLETLHIVKTPDCSNLGLASVVERCKLLRKLHIDGWRVKRIGDQGLMSVAKH 333
Query: 284 CQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWILDS--IGDRGLGVVAFTCKELQELR 341
C NL L L + + L + C+KLERL + S IGD +G +A C L++
Sbjct: 334 CLNLQELVLIGVDATYMS-LSAIASNCKKLERLALCGSGTIGDAEIGCIAEKCVTLRKFC 392
Query: 342 VFPSGVDNAAVTEEGLVAISAGCPKLHSL 370
+ +++ G+ A++ GCPKL L
Sbjct: 393 I-----KGCLISDVGVQALALGCPKLVKL 416
>UNIPROTKB|F1NNA4 [details] [associations]
symbol:FBXL7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000086 "G2/M transition of mitotic cell cycle"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0005813
GO:GO:0000086 GO:GO:0007067 GO:GO:0008283 SUPFAM:SSF81383
GO:GO:0019005 GeneTree:ENSGT00700000104023 InterPro:IPR006553
SMART:SM00367 GO:GO:0031146 OMA:LMLETVI EMBL:AADN02007618
IPI:IPI00583555 Ensembl:ENSGALT00000021147 Uniprot:F1NNA4
Length = 376
Score = 121 (47.7 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 32/73 (43%), Positives = 44/73 (60%)
Query: 93 VEALAKSRVGLEELRL-KRMVVSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANC 151
VE LAK+ L+ L + K +VSD LE L+ + N K L L SCE T GL +AANC
Sbjct: 291 VEYLAKNCTKLKSLDIGKCPLVSDTGLEFLALNCFNLKRLSLKSCESITGQGLQIVAANC 350
Query: 152 RYLRELDLQEIEV 164
L+ L++Q+ +V
Sbjct: 351 FDLQMLNVQDCDV 363
Score = 106 (42.4 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 64/285 (22%), Positives = 112/285 (39%)
Query: 266 LSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWI----LDS 321
+SG + L I C L L +S I + ++ C LE L + +
Sbjct: 94 VSGCRRLTDRGLYTIAQCCPELRRLEVSGCYNISNEAVFDVVSLCPNLEHLDVSVTCISL 153
Query: 322 IGDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKL-HSLLYFCQQMTNA 380
+ + + K++ +R D + +EGL I+A C +L H L C ++T+
Sbjct: 154 TREASIKLSPLHGKQIS-IRYLDM-TDCFVLEDEGLHTIAAHCTQLTHLYLRRCVRITDE 211
Query: 381 ALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQV 440
L + ++ L + D M+ + A ++S TD
Sbjct: 212 GLRYLMIYCTSIKE--LSVSDCRFVSDFGMREI-----AKLESRLRYLSIAHCGRITDVG 264
Query: 441 FLYIGMYAEQLEMLSI-AFAGNSDKGMLYVLNGCKKLRKLEIRDSPF-GNTALLTDVGKY 498
YI Y +L L+ G +D G+ Y+ C KL+ L+I P +T L
Sbjct: 265 IRYIAKYCSKLRYLNARGCEGITDHGVEYLAKNCTKLKSLDIGKCPLVSDTGLEFLALNC 324
Query: 499 ETMRSLWMSSCEVTLG-GCQTLAKKMPRLNVEIINEDDQMEFSLD 542
++ L + SCE G G Q +A +++++N D + S+D
Sbjct: 325 FNLKRLSLKSCESITGQGLQIVAANC--FDLQMLNVQD-CDVSVD 366
Score = 59 (25.8 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 6 PDEVIEHVFDFV-TSQKDRNAVSLVCKSWYKI 36
PD+ + H+F F+ T+Q R A VC+ WY +
Sbjct: 19 PDQSMIHIFSFLPTNQLCRCA--RVCRRWYNL 48
>TAIR|locus:2040105 [details] [associations]
symbol:EBF1 "AT2G25490" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=RCA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009723 "response to ethylene stimulus" evidence=IMP]
[GO:0010105 "negative regulation of ethylene mediated signaling
pathway" evidence=TAS] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009873 GO:GO:0009723
SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0006511 GO:GO:0010105
InterPro:IPR006553 SMART:SM00367 EMBL:AC006300 EMBL:AJ609238
EMBL:AY072205 EMBL:AY091333 EMBL:AK317560 EMBL:AK229995
IPI:IPI00530647 PIR:A84649 RefSeq:NP_565597.1 UniGene:At.24288
UniGene:At.67740 ProteinModelPortal:Q9SKK0 SMR:Q9SKK0 IntAct:Q9SKK0
STRING:Q9SKK0 PRIDE:Q9SKK0 EnsemblPlants:AT2G25490.1 GeneID:817087
KEGG:ath:AT2G25490 TAIR:At2g25490 eggNOG:NOG300245
HOGENOM:HOG000238885 InParanoid:Q9SKK0 KO:K14515 OMA:KCAISDS
PhylomeDB:Q9SKK0 ProtClustDB:CLSN2686700 Genevestigator:Q9SKK0
Uniprot:Q9SKK0
Length = 628
Score = 139 (54.0 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 68/263 (25%), Positives = 122/263 (46%)
Query: 262 SIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWI--L 319
SIR S +V L +I C +L SL+L I N L+++ C +LE+L +
Sbjct: 155 SIRG-SNSAKVSDLGLRSIGRSCPSLGSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRC 213
Query: 320 DSIGDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSL-LYFCQQMT 378
+I D+GL +A +C L EL + + + +EGL+AI+ C KL S+ + C +
Sbjct: 214 STITDKGLVAIAKSCPNLTELTLEAC----SRIGDEGLLAIARSCSKLKSVSIKNCPLVR 269
Query: 379 NAALITVAKNNS-NFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXT 437
+ + ++ N + + + +L +L+ D V++ + +G + +
Sbjct: 270 DQGIASLLSNTTCSLAKLKLQMLN--VTD-VSLAVVGH-YGLSITDL----VLAGLSHVS 321
Query: 438 DQVFLYIG--MYAEQLEMLSI-AFAGNSDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTD 494
++ F +G + ++L L+I A G +D G+ V GC ++K I SP + L
Sbjct: 322 EKGFWVMGNGVGLQKLNSLTITACQGVTDMGLESVGKGCPNMKKAIISKSPLLSDNGLVS 381
Query: 495 VGKYE-TMRSLWMSSCE-VTLGG 515
K ++ SL + C VT G
Sbjct: 382 FAKASLSLESLQLEECHRVTQFG 404
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 121/518 (23%), Positives = 206/518 (39%)
Query: 2 MNYFPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFIGNCYAISPERVIGRF 61
++ PDE + +F ++ ++R+A + V K W + RQ I I+ +
Sbjct: 64 IDVLPDECLFEIFRRLSGPQERSACAFVSKQWLTLVSSIRQKE-IDVPSKITEDG--DDC 120
Query: 62 PGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLK---RMVVSDDCL 118
G S +L GK D L G R GL +L ++ VSD L
Sbjct: 121 EGCLSRSLDGKKA-TDVRLAAIAVG----------TAGRGGLGKLSIRGSNSAKVSDLGL 169
Query: 119 ELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDS 178
+ RS + SL L + T +GL IA C L +L+L ++G + S
Sbjct: 170 RSIGRSCPSLGSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCSTITDKG--LVAIAKS 227
Query: 179 CTSLVSLNF-SCLK-GEINLTALERLVAR--SPNLKSLRLNR----AVPLD----TLQKL 226
C +L L +C + G+ L A+ R ++ S ++K+ L R A L +L KL
Sbjct: 228 CPNLTELTLEACSRIGDEGLLAIARSCSKLKSVSIKNCPLVRDQGIASLLSNTTCSLAKL 287
Query: 227 LMRAPQLVDLGI------GSFVYDP--SSEAYIKLKATLVKCKSI--RSLSGFLEVVPCC 276
++ + D+ + G + D + +++ K V + + L+ L + C
Sbjct: 288 KLQMLNVTDVSLAVVGHYGLSITDLVLAGLSHVSEKGFWVMGNGVGLQKLNS-LTITACQ 346
Query: 277 ------LSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWILDS--IGDRGLG 328
L ++ C N+ +S +P + N L+ + LE L + + + G
Sbjct: 347 GVTDMGLESVGKGCPNMKKAIISKSPLLSDNGLVSFAKASLSLESLQLEECHRVTQFGFF 406
Query: 329 VVAFTCKELQELRVFPSGVDNAAVTE--EGLVAISAGCPKLHSL-LYFCQQMTNAALITV 385
C E +L+ F S V+ ++ + GL A S+ C L SL + C +A L +
Sbjct: 407 GSLLNCGE--KLKAF-SLVNCLSIRDLTTGLPA-SSHCSALRSLSIRNCPGFGDANLAAI 462
Query: 386 AKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYI- 444
K LC L +T + GF ++QS TD+V I
Sbjct: 463 GKLCPQLEDIDLCGLKG-----IT----ESGFLHLIQSSLVKINFSGCSNLTDRVISAIT 513
Query: 445 GMYAEQLEMLSIAFAGN-SDKGMLYVLNGCKKLRKLEI 481
LE+L+I N +D ++ + C+ L L+I
Sbjct: 514 ARNGWTLEVLNIDGCSNITDASLVSIAANCQILSDLDI 551
>TAIR|locus:2124372 [details] [associations]
symbol:VFB3 "AT4G07400" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181 SMART:SM00256
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0004842
HOGENOM:HOG000240905 ProtClustDB:CLSN2681910 EMBL:AF147262
EMBL:AL161505 IPI:IPI00546292 PIR:B85072 RefSeq:NP_567316.1
UniGene:At.66608 ProteinModelPortal:Q9S9X4 SMR:Q9S9X4
EnsemblPlants:AT4G07400.1 GeneID:826171 KEGG:ath:AT4G07400
TAIR:At4g07400 eggNOG:NOG300731 InParanoid:Q9S9X4 OMA:SNLPDEC
PhylomeDB:Q9S9X4 Genevestigator:Q9S9X4 Uniprot:Q9S9X4
Length = 554
Score = 138 (53.6 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 106/450 (23%), Positives = 186/450 (41%)
Query: 6 PDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRQSVFI---GNCYAISPERVIGRFP 62
PDE + +F +T D SLVC+ W IE R + + + ++ P + RF
Sbjct: 78 PDECLSLIFQSLTCA-DLKRCSLVCRRWLTIEGQCRHRLSLKAQSDLISVIPS-LFTRFD 135
Query: 63 GLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMV-VSDDCLELL 121
+ L L+ +D L G +V + R L L+L+ +SD +
Sbjct: 136 SVTKLVLR-----SDRRSL----GICDNAFVMISVRCR-NLTRLKLRGCPEISDLGIIGF 185
Query: 122 SRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTS 181
+ + + K + SC GF G+ A+ C L EL ++ + + I P
Sbjct: 186 TENCRSLKKVSFGSC-GFGVKGMNALLNTCLGLEELSVKRLRGIGAGAELIG--PGGAAG 242
Query: 182 LVSLNFSCLKGEINLTALERLVARSPNLKSLRLNR----------AV--PLDTLQKLLMR 229
SL CLK N L++ + L+ L++ R AV ++ + ++ +
Sbjct: 243 --SLKVICLKELHNGQCFAPLLSGAKGLRILKIFRCSGDWDRVFEAVRDKVNAIVEIHLE 300
Query: 230 APQLVDLGIGSFVYDPSSEAYIKLKA--------TLV--KCKSIRSL--SGFL--EVVPC 275
Q+ DLG+ + E +K LV +CK +R L G+ +
Sbjct: 301 RIQMSDLGLTALSKCSGVEVLHLVKTPDCTNVGLALVAERCKLLRKLHIDGWKTNRIGDE 360
Query: 276 CLSAIHPVCQNLTSLNLSYAPGIHGNELI--KLIRFCRKLERLWIL--DSIGDRGLGVVA 331
L + C NL L L G++ +L ++ C LERL + D++GD L +A
Sbjct: 361 GLIVVAKYCWNLQELVLI---GVNPTKLSLEAIVSNCLNLERLALCGSDTVGDTELCCIA 417
Query: 332 FTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSL-LYFCQQMTNAALITVAKNNS 390
C L++L + N +T++G+ A+ GCP L + + C+ +T + K +
Sbjct: 418 EKCLALRKLCI-----KNCPITDDGIKALGNGCPNLLKVKVKKCRGVTTQGADLLRKRRA 472
Query: 391 NFTRFRLCILDREKPD-PVTMQPLDEGFGA 419
L +++ + P+ P+ + EG GA
Sbjct: 473 ------LLVVNLDAPETPIVEGSVGEG-GA 495
>TAIR|locus:2027082 [details] [associations]
symbol:SKP2A species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA;IPI] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA;IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0051781 "positive regulation of cell
division" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0071365 "cellular response to auxin stimulus"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR001810 Pfam:PF00646
PROSITE:PS50181 SMART:SM00256 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0051781
SUPFAM:SSF81383 GO:GO:0010311 EMBL:AC015447 GO:GO:0019005
GO:GO:0071365 GO:GO:0004842 InterPro:IPR006553 SMART:SM00367
GO:GO:0031146 KO:K10268 EMBL:AY058081 EMBL:AY090308 EMBL:AY085898
IPI:IPI00519620 PIR:B86347 RefSeq:NP_564139.1 UniGene:At.25230
ProteinModelPortal:Q9LPL4 SMR:Q9LPL4 IntAct:Q9LPL4 STRING:Q9LPL4
EnsemblPlants:AT1G21410.1 GeneID:838740 KEGG:ath:AT1G21410
TAIR:At1g21410 eggNOG:NOG257455 HOGENOM:HOG000238537
InParanoid:Q9LPL4 OMA:NLNISQC PhylomeDB:Q9LPL4
ProtClustDB:CLSN2687892 Genevestigator:Q9LPL4 Uniprot:Q9LPL4
Length = 360
Score = 135 (52.6 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 36/125 (28%), Positives = 67/125 (53%)
Query: 266 LSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWI---LDSI 322
LS L++ L A+ C +LT LNLS + L RFCRKL+ L + + ++
Sbjct: 124 LSKSLKITDRSLYALAHGCPDLTKLNLSGCTSFSDTAIAYLTRFCRKLKVLNLCGCVKAV 183
Query: 323 GDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSL-LYFCQQMTNAA 381
D L + C ++Q L + +N ++++G+++++ GCP L +L L C +T+ +
Sbjct: 184 TDNALEAIGNNCNQMQSLNL--GWCEN--ISDDGVMSLAYGCPDLRTLDLCGCVLITDES 239
Query: 382 LITVA 386
++ +A
Sbjct: 240 VVALA 244
>ASPGD|ASPL0000017608 [details] [associations]
symbol:grrA species:162425 "Emericella nidulans"
[GO:0030437 "ascospore formation" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IGI] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR001810 PROSITE:PS50181 GO:GO:0007126 GO:GO:0005737
SUPFAM:SSF81383 GO:GO:0030435 EMBL:BN001302 InterPro:IPR006553
SMART:SM00367 EMBL:AACD01000068 EMBL:DQ309327
ProteinModelPortal:C8V4D4 STRING:Q15I80
EnsemblFungi:CADANIAT00004464 OMA:CNRIRYI InterPro:IPR026940
PANTHER:PTHR23125:SF62 Uniprot:C8V4D4
Length = 585
Score = 125 (49.1 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 63/299 (21%), Positives = 131/299 (43%)
Query: 113 VSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEI-EVDDNRGQW 171
++D L ++ + + L + C T D L A++ NCR L+ L L + +V D
Sbjct: 201 LTDHTLFKVAENCNRLQGLNITGCVKVTDDSLIAVSQNCRLLKRLKLNGVSQVTDKA--- 257
Query: 172 ISCFPDSCTSLVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKL-LMRA 230
I F +C S++ ++ K N ++ L+ NL+ LRL +D L L R
Sbjct: 258 ILSFAQNCPSILEIDLQECKLVTN-QSVTALMTTLQNLRELRLAHCTEIDDSAFLDLPRH 316
Query: 231 PQLVDLGIGSFVYDPS--SEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLT 288
Q+ L I + EA ++ ++ + +++ L+ + + AI + +NL
Sbjct: 317 IQMTSLRILDLTACENIRDEAVERIVSSAPRLRNL-VLAKCKFITDRAVWAICKLGKNLH 375
Query: 289 SLNLSYAPGIHGNELIKLIRFCRKLERLWIL--DSIGDRGLGVVAFTCKELQELRVFPSG 346
++L + I+ + +I+L++ C ++ + + + DR + +A T +L+ + +
Sbjct: 376 YVHLGHCSNINDSAVIQLVKSCNRIRYIDLACCSRLTDRSVQQLA-TLPKLRRIGL---- 430
Query: 347 VDNAAVTEEGLVAI-------SAGCPKLHSL-LYFCQQMTNAALITVAKNNSNFTRFRL 397
V +T+ ++A+ S C L + L +C +T + + + T L
Sbjct: 431 VKCQLITDASILALARPAQDHSVPCSSLERVHLSYCVNLTMVGIHALLNSCPRLTHLSL 489
Score = 59 (25.8 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 4 YFPDEVIEHVFDFVTSQKDRNAVSLVCKSW 33
Y P E++ +F ++S +D + LVC+ W
Sbjct: 69 YLPPEILISIFSKLSSPRDLLSCLLVCRIW 98
>DICTYBASE|DDB_G0287415 [details] [associations]
symbol:DDB_G0287415 "SCF E3 ubiquitin ligase complex
F-box protein GRR1" species:44689 "Dictyostelium discoideum"
[GO:0044351 "macropinocytosis" evidence=RCA] dictyBase:DDB_G0287415
EMBL:AAFI02000100 eggNOG:NOG300245 RefSeq:XP_637297.1
ProteinModelPortal:Q54KC6 EnsemblProtists:DDB0187476 GeneID:8626130
KEGG:ddi:DDB_G0287415 InParanoid:Q54KC6 OMA:MIWRERI Uniprot:Q54KC6
Length = 1012
Score = 140 (54.3 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 72/298 (24%), Positives = 136/298 (45%)
Query: 103 LEELRLKRM-VVSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQE 161
LE+L + ++ +V+D L L + K L + C T L I R+L L L+
Sbjct: 646 LEQLYMCKLPMVNDAVLPALLSNLCKLKILRIDGCVNMTDRSLTGI----RFLNRLCLEV 701
Query: 162 IEVDDNR---GQWISCFPDSCT-SLVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRA 217
D+R G ++ S L + N + +I L+ + + +++ LRL+
Sbjct: 702 FNCSDSRIGCGGLLTILQQSSIRELYAWNCDYITDDI----LKTIANDASSIQILRLDGC 757
Query: 218 VPLDT--LQKLLMRAPQLVDLGIGSFVYDPSSEAYIKLKATLVKCKSIRSL--SGFLEVV 273
+ ++ L+ R P L L I + SS+ ++ A CK ++ L + ++
Sbjct: 758 KNISDKGVRTLIQRCPLLRILNISN---TKSSDETLQTVAGY--CKRLKKLYANNCTKIT 812
Query: 274 PCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWILD---SIGDRGLGVV 330
+SAI C LT LN S I N +I + C+ L+RL IL+ I + + V
Sbjct: 813 SSGISAIAYQCNELTILNASRCANITDNAIIDISLKCKLLKRL-ILNYCPKITSQAIIRV 871
Query: 331 AFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSLLYF-CQQMTNAALITVAK 387
+ C+ L+E+ + G N + E G++++S C +L + + C +T+ +++ + +
Sbjct: 872 SVGCQMLKEISL--KGCTN--LDEMGVLSLSTYCKRLQYIDFTDCHLVTDLSILGIGR 925
Score = 132 (51.5 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 78/301 (25%), Positives = 132/301 (43%)
Query: 112 VVSDDCLELLSRSFVNFKSLVLVS-CEGFTTDGLAAIAANC-RYLRELDLQEIEVDDNRG 169
+++D L ++ + + S++ VS C+ T +A IA NC + L +L LQ IE
Sbjct: 369 LITDSVLSDIAINCSSQLSVINVSKCKNITNTSIATIAINCGKMLTKLFLQNIECLSIHS 428
Query: 170 QWISCFPDSCTSLVSLNFSCLKGEINLTALERLVARSP--NLKSLRLNRAVPLDTLQKLL 227
IS CT L +L L G +NL + + + P LK L L+ ++ + L+
Sbjct: 429 --ISLLGKYCTQLTTLR---LDGCLNLMD-DSIQSLQPLERLKILNLSNLPKINEIS-LI 481
Query: 228 MRAPQLVDLGIGSFVYDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQN- 286
P L DL ++Y+ + + +K + I SL V S I P +
Sbjct: 482 RILPSLKDLE-ELYLYENPRFSDLTIKQLSISNPRITSLRVDKTVFVSDASII-PFTNSV 539
Query: 287 --LTSLNLSYAPGIHGNELIKLIRFCRKLERLWI--LDSIGDRGL-GVVAFTCKELQELR 341
L LNLS IH + ++ L + +++L++ SIG+ L + L+ L+
Sbjct: 540 SYLRVLNLSGLQSIHDSSIMALATSQKFIQKLYLSGCKSIGNDSLFAITGHMSSSLEVLK 599
Query: 342 VFPSGVDNAAVTEEGLVAISA--GCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCI 399
+ D+ TEE L +IS G K+ S+ + C TN + + N + +C
Sbjct: 600 ID----DSHQFTEEALSSISLLKGL-KILSISH-CVHTTNNTIDLIGYNCRELEQLYMCK 653
Query: 400 L 400
L
Sbjct: 654 L 654
>UNIPROTKB|F1SRM7 [details] [associations]
symbol:FBXL7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0000086 "G2/M transition of mitotic
cell cycle" evidence=IEA] InterPro:IPR001810 PROSITE:PS50181
SMART:SM00256 GO:GO:0005813 GO:GO:0000086 GO:GO:0007067
GO:GO:0008283 SUPFAM:SSF81383 GO:GO:0019005
GeneTree:ENSGT00700000104023 InterPro:IPR006553 SMART:SM00367
GO:GO:0031146 OMA:LMLETVI EMBL:FP236208 Ensembl:ENSSSCT00000025512
Uniprot:F1SRM7
Length = 449
Score = 123 (48.4 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 33/73 (45%), Positives = 44/73 (60%)
Query: 93 VEALAKSRVGLEELRL-KRMVVSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANC 151
VE LAK+ L+ L + K +VSD LE L+ + N K L L SCE T GL +AANC
Sbjct: 352 VEYLAKNCAKLKSLDIGKCPLVSDTGLECLALNCFNLKRLSLKSCESITGQGLQIVAANC 411
Query: 152 RYLRELDLQEIEV 164
L+ L++Q+ EV
Sbjct: 412 FDLQMLNVQDCEV 424
Score = 53 (23.7 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 6 PDEVIEHVFDFV-TSQKDRNAVSLVCKSWYKI 36
PD + VF F+ T+Q R A VC+ WY +
Sbjct: 76 PDHAMVQVFSFLPTNQLCRCA--RVCRRWYNL 105
>MGI|MGI:2443416 [details] [associations]
symbol:Fbxl13 "F-box and leucine-rich repeat protein 13"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 MGI:MGI:2443416 InterPro:IPR006553
SMART:SM00367 eggNOG:NOG300245 GeneTree:ENSGT00700000104313
EMBL:AK029566 EMBL:AK030172 IPI:IPI00228939 IPI:IPI00970564
RefSeq:NP_796050.2 UniGene:Mm.442295 ProteinModelPortal:Q8CDU4
SMR:Q8CDU4 PhosphoSite:Q8CDU4 PRIDE:Q8CDU4
Ensembl:ENSMUST00000051358 GeneID:320118 KEGG:mmu:320118
UCSC:uc008wop.2 UCSC:uc008woq.1 CTD:222235 HOGENOM:HOG000006699
HOVERGEN:HBG051673 InParanoid:Q8CDU4 KO:K10279 OMA:LQIGCKQ
OrthoDB:EOG4DBTD3 NextBio:396064 Bgee:Q8CDU4 CleanEx:MM_FBXL13
Genevestigator:Q8CDU4 Uniprot:Q8CDU4
Length = 790
Score = 134 (52.2 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 81/335 (24%), Positives = 149/335 (44%)
Query: 57 VIGRFPGLKSLTLKGKPHFADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLK-RMVVSD 115
++ + P + S+ L G PH +D +AL S L+++R + +SD
Sbjct: 422 LVEKCPRISSVVLIGSPHISDSAF-------------KAL--SSCDLKKIRFEGNKRISD 466
Query: 116 DCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQE-IEVDDNRGQWISC 174
C + + R++ + +V C+G T L +++ + L L+L I + D +
Sbjct: 467 ACFKSIDRNYPGINHIYMVDCKGLTDSSLKSLSL-LKQLTVLNLTNCIRIGDIGLKHFFD 525
Query: 175 FPDSCTSLVSLNFS-C-LKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQ-KLLMRAP 231
P S L LN + C L G+ +++ RL R PNL L L L L + +
Sbjct: 526 GPASIR-LRELNLTNCSLLGD---SSVIRLSERCPNLHYLNLRNCEHLTDLAIEYIASML 581
Query: 232 QLVDLGI-GSFVYDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSL 290
L+ + + G+ + S+E L K + + S+S + + + A L L
Sbjct: 582 SLISVDLSGTLI---SNEGMTILSRHR-KLREV-SVSDCVNITDFGIRAYCKTSLLLEHL 636
Query: 291 NLSYAPGIHGNELIKLIR-FCRKLERLWILD--SIGDRGLGVVAFTCKELQELRVFPSGV 347
++SY + +++IK I FC ++ L I I D G+ +++ C L L + SG
Sbjct: 637 DVSYCSQLT-DDIIKTIAIFCTRITSLNIAGCPKITDAGMEILSARCHYLHILDI--SGC 693
Query: 348 DNAAVTEEGLVAISAGCPKLHSL-LYFCQQMTNAA 381
+T++ + + GC +L L + FC+ ++ AA
Sbjct: 694 --IQLTDQIIQDLQIGCKQLRILKMQFCKSISPAA 726
>TAIR|locus:2166978 [details] [associations]
symbol:AT5G23340 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002688
GenomeReviews:BA000015_GR InterPro:IPR006553 SMART:SM00367
EMBL:AB007648 eggNOG:NOG300245 KO:K10268 EMBL:AY054268
EMBL:AY133522 EMBL:AK226277 IPI:IPI00524374 RefSeq:NP_197725.1
UniGene:At.21636 UniGene:At.71067 ProteinModelPortal:Q9FMW7
SMR:Q9FMW7 IntAct:Q9FMW7 STRING:Q9FMW7 PaxDb:Q9FMW7 PRIDE:Q9FMW7
EnsemblPlants:AT5G23340.1 GeneID:832398 KEGG:ath:AT5G23340
TAIR:At5g23340 HOGENOM:HOG000030079 InParanoid:Q9FMW7 OMA:DSCEQAG
PhylomeDB:Q9FMW7 ProtClustDB:CLSN2686136 Genevestigator:Q9FMW7
Uniprot:Q9FMW7
Length = 405
Score = 130 (50.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 77/336 (22%), Positives = 142/336 (42%)
Query: 205 RSPNLKSLRLNRAVPLDTLQKLLMRAPQLVDLGIGSFV----YDPSSEAYIKLKATLVKC 260
+S + K L RA P L++L R Q+V+L + + Y +++ + + + K
Sbjct: 42 QSTDRKKLAA-RAGP-HMLRRLASRFTQIVELDLSQSISRSFYPGVTDSDLAVISEGFKF 99
Query: 261 KSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWILD 320
+ +L + L++I L L++SY + L + C L L +
Sbjct: 100 LRVLNLHNCKGITDTGLASIGRCLSLLQFLDVSYCRKLSDKGLSAVAEGCHDLRALHLAG 159
Query: 321 S--IGDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSL-LYFCQQM 377
I D L ++ C++L+ L + G N +T+ GL + GC K+ SL + C +
Sbjct: 160 CRFITDESLKSLSERCRDLEALGL--QGCTN--ITDSGLADLVKGCRKIKSLDINKCSNV 215
Query: 378 TNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXX--X 435
+A + +VAK ++ + L +LD K +E ++ Q CK
Sbjct: 216 GDAGVSSVAKACASSLK-TLKLLDCYKVG-------NESISSLAQFCKNLETLIIGGCRD 267
Query: 436 XTDQ-VFLYIGMYAEQLEMLSIAFAGN-SDKGMLYVLNGCKKLRKLEIRDSPFGNTALLT 493
+D+ + L + L+ L + + N SD + +L CK L L+I
Sbjct: 268 ISDESIMLLADSCKDSLKNLRMDWCLNISDSSLSCILKQCKNLEALDIGCCEEVTDTAFR 327
Query: 494 DVGKYETM--RSLWMSSC-EVTLGGCQTLAKKMPRL 526
D+G + + + L +S+C ++T+ G L K L
Sbjct: 328 DLGSDDVLGLKVLKVSNCTKITVTGIGKLLDKCSSL 363
Score = 126 (49.4 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 61/238 (25%), Positives = 110/238 (46%)
Query: 113 VSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWI 172
V+D L ++S F + L L +C+G T GLA+I L+ LD+ ++G +
Sbjct: 85 VTDSDLAVISEGFKFLRVLNLHNCKGITDTGLASIGRCLSLLQFLDVSYCRKLSDKG--L 142
Query: 173 SCFPDSCTSLVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPL-DT-LQKLLMRA 230
S + C L +L+ + + I +L+ L R +L++L L + D+ L L+
Sbjct: 143 SAVAEGCHDLRALHLAGCRF-ITDESLKSLSERCRDLEALGLQGCTNITDSGLADLVKGC 201
Query: 231 PQLVDLGIG--SFVYDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLT 288
++ L I S V D + K A+ +K +++ L + +V +S++ C+NL
Sbjct: 202 RKIKSLDINKCSNVGDAGVSSVAKACASSLK--TLKLLDCY-KVGNESISSLAQFCKNLE 258
Query: 289 SLNLSYAPGIHGNELIKLIRFCR-KLERL---WILDSIGDRGLGVVAFTCKELQELRV 342
+L + I ++ L C+ L+ L W L+ I D L + CK L+ L +
Sbjct: 259 TLIIGGCRDISDESIMLLADSCKDSLKNLRMDWCLN-ISDSSLSCILKQCKNLEALDI 315
>UNIPROTKB|D6RDY7 [details] [associations]
symbol:FBXL7 "F-box/LRR-repeat protein 7" species:9606
"Homo sapiens" [GO:0000086 "G2/M transition of mitotic cell cycle"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0005813
GO:GO:0000086 GO:GO:0007067 GO:GO:0008283 SUPFAM:SSF81383
GO:GO:0019005 InterPro:IPR006553 SMART:SM00367 GO:GO:0031146
HOGENOM:HOG000116328 HGNC:HGNC:13604 ChiTaRS:FBXL7 EMBL:AC010477
EMBL:AC010638 EMBL:AC027332 EMBL:AC091872 EMBL:AC091970
IPI:IPI00967207 ProteinModelPortal:D6RDY7 SMR:D6RDY7
Ensembl:ENST00000510662 ArrayExpress:D6RDY7 Bgee:D6RDY7
Uniprot:D6RDY7
Length = 444
Score = 124 (48.7 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 33/73 (45%), Positives = 44/73 (60%)
Query: 93 VEALAKSRVGLEELRL-KRMVVSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANC 151
VE LAK+ L+ L + K +VSD LE L+ + N K L L SCE T GL +AANC
Sbjct: 347 VEYLAKNCTKLKSLDIGKCPLVSDTGLECLALNCFNLKRLSLKSCESITGQGLQIVAANC 406
Query: 152 RYLRELDLQEIEV 164
L+ L++Q+ EV
Sbjct: 407 FDLQTLNVQDCEV 419
Score = 50 (22.7 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 6 PDEVIEHVFDFV-TSQKDRNAVSLVCKSWYKI 36
PD + +F F+ T+Q R A VC+ WY +
Sbjct: 71 PDHSMVQIFSFLPTNQLCRCA--RVCRRWYNL 100
>UNIPROTKB|J3KNM9 [details] [associations]
symbol:FBXL7 "F-box/LRR-repeat protein 7" species:9606
"Homo sapiens" [GO:0000086 "G2/M transition of mitotic cell cycle"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 SUPFAM:SSF81383
InterPro:IPR006553 SMART:SM00367 HGNC:HGNC:13604 ChiTaRS:FBXL7
EMBL:AC010477 EMBL:AC010638 EMBL:AC027332 EMBL:AC091872
EMBL:AC091970 ProteinModelPortal:J3KNM9 Ensembl:ENST00000329673
PhylomeDB:J3KNM9 Uniprot:J3KNM9
Length = 479
Score = 124 (48.7 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 33/73 (45%), Positives = 44/73 (60%)
Query: 93 VEALAKSRVGLEELRL-KRMVVSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANC 151
VE LAK+ L+ L + K +VSD LE L+ + N K L L SCE T GL +AANC
Sbjct: 382 VEYLAKNCTKLKSLDIGKCPLVSDTGLECLALNCFNLKRLSLKSCESITGQGLQIVAANC 441
Query: 152 RYLRELDLQEIEV 164
L+ L++Q+ EV
Sbjct: 442 FDLQTLNVQDCEV 454
Score = 50 (22.7 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 6 PDEVIEHVFDFV-TSQKDRNAVSLVCKSWYKI 36
PD + +F F+ T+Q R A VC+ WY +
Sbjct: 106 PDHSMVQIFSFLPTNQLCRCA--RVCRRWYNL 135
>UNIPROTKB|Q9UJT9 [details] [associations]
symbol:FBXL7 "F-box/LRR-repeat protein 7" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=NAS] [GO:0000086 "G2/M transition of
mitotic cell cycle" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0005813 "centrosome"
evidence=ISS] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=ISS] [GO:0007067 "mitosis" evidence=ISS]
InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181 PROSITE:PS51450
SMART:SM00256 UniPathway:UPA00143 GO:GO:0005737 GO:GO:0005813
GO:GO:0000086 GO:GO:0051301 GO:GO:0007067 GO:GO:0008283
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 InterPro:IPR006553
SMART:SM00367 EMBL:CH471102 GO:GO:0031146 eggNOG:NOG259371
HOGENOM:HOG000116328 HOVERGEN:HBG051591 KO:K10273 OMA:LMLETVI
OrthoDB:EOG495ZRQ EMBL:AF199356 EMBL:AB020647 EMBL:BC075061
EMBL:BC136424 EMBL:AF174593 IPI:IPI00017566 RefSeq:NP_036436.1
UniGene:Hs.433057 ProteinModelPortal:Q9UJT9 SMR:Q9UJT9
IntAct:Q9UJT9 STRING:Q9UJT9 PhosphoSite:Q9UJT9 DMDM:37537858
PaxDb:Q9UJT9 PRIDE:Q9UJT9 Ensembl:ENST00000504595 GeneID:23194
KEGG:hsa:23194 UCSC:uc003jfn.1 CTD:23194 GeneCards:GC05P015553
HGNC:HGNC:13604 MIM:605656 neXtProt:NX_Q9UJT9 PharmGKB:PA28027
InParanoid:Q9UJT9 ChiTaRS:FBXL7 GenomeRNAi:23194 NextBio:44691
ArrayExpress:Q9UJT9 Bgee:Q9UJT9 CleanEx:HS_FBXL7
Genevestigator:Q9UJT9 Uniprot:Q9UJT9
Length = 491
Score = 124 (48.7 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 33/73 (45%), Positives = 44/73 (60%)
Query: 93 VEALAKSRVGLEELRL-KRMVVSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANC 151
VE LAK+ L+ L + K +VSD LE L+ + N K L L SCE T GL +AANC
Sbjct: 394 VEYLAKNCTKLKSLDIGKCPLVSDTGLECLALNCFNLKRLSLKSCESITGQGLQIVAANC 453
Query: 152 RYLRELDLQEIEV 164
L+ L++Q+ EV
Sbjct: 454 FDLQTLNVQDCEV 466
Score = 50 (22.7 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 6 PDEVIEHVFDFV-TSQKDRNAVSLVCKSWYKI 36
PD + +F F+ T+Q R A VC+ WY +
Sbjct: 118 PDHSMVQIFSFLPTNQLCRCA--RVCRRWYNL 147
>UNIPROTKB|F1N019 [details] [associations]
symbol:FBXL7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0000086 "G2/M transition of mitotic
cell cycle" evidence=IEA] InterPro:IPR001810 PROSITE:PS50181
SMART:SM00256 GO:GO:0005813 GO:GO:0000086 GO:GO:0007067
GO:GO:0008283 SUPFAM:SSF81383 GO:GO:0019005
GeneTree:ENSGT00700000104023 InterPro:IPR006553 SMART:SM00367
GO:GO:0031146 OMA:LMLETVI EMBL:DAAA02051082 IPI:IPI00686135
Ensembl:ENSBTAT00000004177 Uniprot:F1N019
Length = 449
Score = 120 (47.3 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 32/73 (43%), Positives = 44/73 (60%)
Query: 93 VEALAKSRVGLEELRL-KRMVVSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANC 151
+E LAK+ L+ L + K +VSD LE L+ + N K L L SCE T GL +AANC
Sbjct: 352 LEYLAKNCAKLKSLDIGKCPLVSDTGLECLALNCFNLKRLSLKSCESITGQGLQIVAANC 411
Query: 152 RYLRELDLQEIEV 164
L+ L++Q+ EV
Sbjct: 412 FDLQMLNVQDCEV 424
Score = 53 (23.7 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 6 PDEVIEHVFDFV-TSQKDRNAVSLVCKSWYKI 36
PD + VF F+ T+Q R A VC+ WY +
Sbjct: 76 PDHAMVQVFSFLPTNQLCRCA--RVCRRWYNL 105
>RGD|1305813 [details] [associations]
symbol:Fbxl7 "F-box and leucine-rich repeat protein 7"
species:10116 "Rattus norvegicus" [GO:0000086 "G2/M transition of
mitotic cell cycle" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0007067 "mitosis" evidence=IEA;ISO]
[GO:0008283 "cell proliferation" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA;ISO] InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256
RGD:1305813 GO:GO:0005813 GO:GO:0000086 GO:GO:0007067 GO:GO:0008283
SUPFAM:SSF81383 GO:GO:0019005 GeneTree:ENSGT00700000104023
InterPro:IPR006553 SMART:SM00367 GO:GO:0031146 IPI:IPI00373157
Ensembl:ENSRNOT00000031170 Uniprot:F1M6W6
Length = 449
Score = 122 (48.0 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 33/73 (45%), Positives = 44/73 (60%)
Query: 93 VEALAKSRVGLEELRL-KRMVVSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANC 151
VE LAK+ L+ L + K +VSD LE L+ + N K L L SCE T GL +AANC
Sbjct: 352 VEYLAKNCTKLKSLDIGKCPLVSDTGLESLALNCFNLKRLSLKSCESITGQGLQIVAANC 411
Query: 152 RYLRELDLQEIEV 164
L+ L++Q+ EV
Sbjct: 412 FDLQMLNVQDCEV 424
Score = 50 (22.7 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 6 PDEVIEHVFDFV-TSQKDRNAVSLVCKSWYKI 36
PD + +F F+ T+Q R A VC+ WY +
Sbjct: 76 PDHSMVQIFSFLPTNQLCRCA--RVCRRWYNL 105
>MGI|MGI:3052506 [details] [associations]
symbol:Fbxl7 "F-box and leucine-rich repeat protein 7"
species:10090 "Mus musculus" [GO:0000086 "G2/M transition of
mitotic cell cycle" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IMP] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 PROSITE:PS51450 SMART:SM00256
UniPathway:UPA00143 MGI:MGI:3052506 GO:GO:0005737 GO:GO:0005813
GO:GO:0000086 GO:GO:0051301 GO:GO:0007067 GO:GO:0008283
SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0019005
GeneTree:ENSGT00700000104023 InterPro:IPR006553 SMART:SM00367
GO:GO:0031146 HSSP:Q13309 eggNOG:NOG259371 HOGENOM:HOG000116328
HOVERGEN:HBG051591 KO:K10273 OMA:LMLETVI OrthoDB:EOG495ZRQ
CTD:23194 EMBL:AK129227 EMBL:BC091646 IPI:IPI00420560
RefSeq:NP_795933.2 UniGene:Mm.253378 ProteinModelPortal:Q5BJ29
SMR:Q5BJ29 STRING:Q5BJ29 PhosphoSite:Q5BJ29 PRIDE:Q5BJ29
Ensembl:ENSMUST00000059204 GeneID:448987 KEGG:mmu:448987
UCSC:uc007vjn.1 InParanoid:Q5BJ29 NextBio:410960 Bgee:Q5BJ29
CleanEx:MM_FBXL7 Genevestigator:Q5BJ29 Uniprot:Q5BJ29
Length = 491
Score = 122 (48.0 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 33/73 (45%), Positives = 44/73 (60%)
Query: 93 VEALAKSRVGLEELRL-KRMVVSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANC 151
VE LAK+ L+ L + K +VSD LE L+ + N K L L SCE T GL +AANC
Sbjct: 394 VEYLAKNCTKLKSLDIGKCPLVSDTGLESLALNCFNLKRLSLKSCESITGQGLQIVAANC 453
Query: 152 RYLRELDLQEIEV 164
L+ L++Q+ EV
Sbjct: 454 FDLQMLNVQDCEV 466
Score = 50 (22.7 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 6 PDEVIEHVFDFV-TSQKDRNAVSLVCKSWYKI 36
PD + +F F+ T+Q R A VC+ WY +
Sbjct: 118 PDHSMVQIFSFLPTNQLCRCA--RVCRRWYNL 147
>UNIPROTKB|Q58HZ9 [details] [associations]
symbol:SKP2 "S-phase kinase-associated protein 2"
species:9031 "Gallus gallus" [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] [GO:0000086 "G2/M transition of mitotic cell cycle"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] InterPro:IPR001810 PROSITE:PS50181
SMART:SM00256 GO:GO:0000086 GO:GO:0000082 SUPFAM:SSF81383
GO:GO:0016301 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0004842 GO:GO:0000209 GO:GO:0033148 eggNOG:NOG263321
HOGENOM:HOG000247037 HOVERGEN:HBG047488
GeneTree:ENSGT00390000007918 OrthoDB:EOG4DR9D4 EMBL:AADN02052158
EMBL:AADN02052159 EMBL:AY947341 IPI:IPI00819800 UniGene:Gga.42319
SMR:Q58HZ9 STRING:Q58HZ9 Ensembl:ENSGALT00000039128
InParanoid:Q58HZ9 Uniprot:Q58HZ9
Length = 416
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 58/229 (25%), Positives = 106/229 (46%)
Query: 6 PDEVIEHVFDFVTSQKDRNAVSLVCKSWYKI--ERLSRQSVFIGNCYAISPERVIGRF-P 62
PDE++ +F ++ D VS++CK W+++ + Q++ + C ++ P VIG+ P
Sbjct: 95 PDELLLAIFAYLPLN-DLLKVSMICKRWHRLSFDESLWQTLDL-TCRSLLPG-VIGQLLP 151
Query: 63 -GLKSLTLK----GKPHFADFNLLPY---DWGGWVYPW--VEALAKSRVGLEELRLKRMV 112
G+ + G P F L D ++++ LE L L+ +V
Sbjct: 152 AGVTAFRCPRSCIGNPLFKTMKPLRVQHMDLSNCTVSVADLQSILCRCERLENLSLEGLV 211
Query: 113 VSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWI 172
+SDD ++ ++++ + L L C GF+ + L + + C L EL+L D +
Sbjct: 212 LSDDIIKSIAKN-PSLIRLNLCGCSGFSAEALELMLSKCSMLEELNLSWC---DFTATHV 267
Query: 173 SCFPDSCTSLVS-LNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPL 220
TS V+ LN S + + ++ ++ LV R P L L L+ +V L
Sbjct: 268 KTAVSHITSKVTQLNLSGYRQNLQMSDVKTLVERCPLLVHLDLSDSVML 316
>UNIPROTKB|Q5ZM99 [details] [associations]
symbol:SKP2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] [GO:0000086 "G2/M transition of mitotic cell cycle"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] InterPro:IPR001810 PROSITE:PS50181
SMART:SM00256 GO:GO:0000086 GO:GO:0000082 SUPFAM:SSF81383
GO:GO:0051726 GO:GO:0006511 GO:GO:0019005 GO:GO:0004842
GO:GO:0000209 GO:GO:0033148 KO:K03875 CTD:6502 HOGENOM:HOG000247037
HOVERGEN:HBG047488 OMA:TIARPTV GeneTree:ENSGT00390000007918
EMBL:AADN02052158 EMBL:AADN02052159 UniGene:Gga.42319 EMBL:AJ719485
IPI:IPI00592259 RefSeq:NP_001007983.1 SMR:Q5ZM99 STRING:Q5ZM99
Ensembl:ENSGALT00000005609 GeneID:427437 KEGG:gga:427437
InParanoid:Q5ZM99 NextBio:20828696 Uniprot:Q5ZM99
Length = 443
Score = 124 (48.7 bits), Expect = 0.00017, P = 0.00017
Identities = 58/229 (25%), Positives = 106/229 (46%)
Query: 6 PDEVIEHVFDFVTSQKDRNAVSLVCKSWYKI--ERLSRQSVFIGNCYAISPERVIGRF-P 62
PDE++ +F ++ D VS++CK W+++ + Q++ + C ++ P VIG+ P
Sbjct: 122 PDELLLAIFAYLPLN-DLLKVSMICKRWHRLSFDESLWQTLDL-TCRSLLPG-VIGQLLP 178
Query: 63 -GLKSLTLK----GKPHFADFNLLPY---DWGGWVYPW--VEALAKSRVGLEELRLKRMV 112
G+ + G P F L D ++++ LE L L+ +V
Sbjct: 179 AGVTAFRCPRSCIGNPLFKTMKPLRVQHMDLSNCTVSVADLQSILCRCERLENLSLEGLV 238
Query: 113 VSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWI 172
+SDD ++ ++++ + L L C GF+ + L + + C L EL+L D +
Sbjct: 239 LSDDIIKSIAKN-PSLIRLNLCGCSGFSAEALELMLSKCSMLEELNLSWC---DFTATHV 294
Query: 173 SCFPDSCTSLVS-LNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPL 220
TS V+ LN S + + ++ ++ LV R P L L L+ +V L
Sbjct: 295 KTAVSHITSKVTQLNLSGYRQNLQMSDVKTLVERCPLLVHLDLSDSVML 343
>UNIPROTKB|D2DGZ0 [details] [associations]
symbol:SKP2 "S-phase kinase-associated protein 2"
species:9823 "Sus scrofa" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0033148 "positive regulation of intracellular estrogen receptor
signaling pathway" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000086 "G2/M transition of
mitotic cell cycle" evidence=IEA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256
GO:GO:0000086 GO:GO:0000082 SUPFAM:SSF81383 GO:GO:0016301
GO:GO:0051726 GO:GO:0006511 GO:GO:0019005 GO:GO:0004842
GO:GO:0000209 GO:GO:0033148 KO:K03875 CTD:6502 OMA:TIARPTV
GeneTree:ENSGT00390000007918 OrthoDB:EOG4DR9D4 EMBL:CU856110
EMBL:FJ536864 RefSeq:NP_001165226.1 UniGene:Ssc.22189
Ensembl:ENSSSCT00000018330 GeneID:100329128 KEGG:ssc:100329128
ArrayExpress:D2DGZ0 Uniprot:D2DGZ0
Length = 424
Score = 123 (48.4 bits), Expect = 0.00021, P = 0.00021
Identities = 73/303 (24%), Positives = 129/303 (42%)
Query: 6 PDEVIEHVFDFVTSQKDRNAVSLVCKSWYKI---ERLSRQSVFIG-NCYAISPERVIGRF 61
PDE++ +F + + VS VCK WY + E L + G N + R++ R
Sbjct: 101 PDELLLGIFSCLCLP-ELLKVSSVCKRWYHLAFDESLWQTLDLTGRNLHPDVTGRLLSR- 158
Query: 62 PGLKSL----TLKGKP---HFADFNLLPYDWGGWVYP--WVEALAKSRVGLEELRLKRMV 112
G+ + + +P HF+ F + D V + L L+ L L+ +
Sbjct: 159 -GVVAFRCPRSFMDQPLVEHFSPFRVQHMDLSNSVIDVSTLHGLLSQCSKLQNLSLEGLR 217
Query: 113 VSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWI 172
+SD + L+++ N L L C GF+ L + ++C L EL+L + +
Sbjct: 218 LSDPIVNNLAQN-TNLVRLNLSGCSGFSESALKTLLSSCSRLDELNLSWCYDFTEKHVQV 276
Query: 173 SCFPDSCTSLVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPL--DTLQKLLMRA 230
+ S T + LN S + + + + LV R PNL L L+ +V L D Q+ +
Sbjct: 277 AVAHVSET-ITQLNLSGYRKNLQKSDVSTLVGRCPNLVHLDLSDSVMLKNDCFQEFY-QL 334
Query: 231 PQLVDLGIGSFVYDPSSEAYIKL-KATLVKCKSIRSL--SGFLEVVPCCLSAIHPVCQNL 287
L L + S YD E ++L + +K + + G L+++ L + C +
Sbjct: 335 NYLQHLSL-SRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHF 393
Query: 288 TSL 290
T++
Sbjct: 394 TTI 396
>RGD|621722 [details] [associations]
symbol:Fbxl20 "F-box and leucine-rich repeat protein 20"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256
RGD:621722 GO:GO:0005737 GeneTree:ENSGT00700000104023
InterPro:IPR006553 SMART:SM00367 eggNOG:NOG300245 KO:K10268
HOGENOM:HOG000230659 HOVERGEN:HBG051586 CTD:84961 EMBL:AF182443
IPI:IPI00215006 PIR:T52349 RefSeq:NP_071608.1 UniGene:Rn.18281
ProteinModelPortal:Q9QZH7 Ensembl:ENSRNOT00000067317 GeneID:64039
KEGG:rno:64039 UCSC:RGD:621722 InParanoid:Q9QZH7 NextBio:612681
ArrayExpress:Q9QZH7 Genevestigator:Q9QZH7
GermOnline:ENSRNOG00000005081 Uniprot:Q9QZH7
Length = 276
Score = 119 (46.9 bits), Expect = 0.00025, P = 0.00025
Identities = 37/134 (27%), Positives = 60/134 (44%)
Query: 260 CKSIR--SLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLW 317
C +R L+ + L A+ C L LN+S+ + + + L+R C L+ L+
Sbjct: 142 CSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALF 201
Query: 318 I--LDSIGDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLHSLLYF-C 374
+ + D L + C EL L + +T+EGL+ I GC KL SL C
Sbjct: 202 LKGCTQLEDEALKYIGAHCPELVTLNLQTC----LQITDEGLITICRGCHKLQSLCASGC 257
Query: 375 QQMTNAALITVAKN 388
+T+A L + +N
Sbjct: 258 SNITDAILNALGQN 271
>MGI|MGI:1354704 [details] [associations]
symbol:Fbxl17 "F-box and leucine-rich repeat protein 17"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001810
Pfam:PF00646 PROSITE:PS50181 SMART:SM00256 MGI:MGI:1354704
SUPFAM:SSF81383 GeneTree:ENSGT00700000104023 EMBL:CH466537
EMBL:BC058120 EMBL:BC138330 EMBL:BC138331 EMBL:AF176529
EMBL:AK004419 IPI:IPI00348513 IPI:IPI00403922 RefSeq:NP_056609.1
UniGene:Mm.136366 ProteinModelPortal:Q9QZN1 SMR:Q9QZN1
STRING:Q9QZN1 PhosphoSite:Q9QZN1 PRIDE:Q9QZN1
Ensembl:ENSMUST00000024761 GeneID:50758 KEGG:mmu:50758
UCSC:uc008dfj.2 UCSC:uc008dfl.2 CTD:64839 eggNOG:NOG317782
HOGENOM:HOG000169154 HOVERGEN:HBG107935 InParanoid:Q9QZN1 KO:K10283
OMA:PASECAP OrthoDB:EOG4BK54B ChiTaRS:FBXL17 NextBio:307645
Bgee:Q9QZN1 CleanEx:MM_FBXL17 Genevestigator:Q9QZN1
GermOnline:ENSMUSG00000023965 Uniprot:Q9QZN1
Length = 701
Score = 123 (48.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 64/329 (19%), Positives = 146/329 (44%)
Query: 110 RMVVSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCR-YLRELDLQEIEVDDNR 168
R V+D+ LE ++ N + + C + G+ +A C LR + ++ D
Sbjct: 370 RQQVTDELLEKIASRSQNIIEINISDCRSLSDSGVCVLAFKCPGLLRYTAYRCKQLSDTS 429
Query: 169 GQWISCFPDSCTSLVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPLDTLQKLLM 228
I C L ++ + ++ L++L +R LK + + + + +++
Sbjct: 430 ---IIAVASHCPLLQKVHVGN-QDKLTDEGLKQLGSRCRELKDIHFGQCYKISD-EGMIV 484
Query: 229 RAPQLVDLGIGSFVYDPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPV-CQNL 287
A + L ++ + +KA C ++ + GF+ IH +NL
Sbjct: 485 IAKSCLKLQ-RIYMQENKLVTDQSVKAFAEHCPELQYV-GFMGCSVTSKGVIHLTKLRNL 542
Query: 288 TSLNLSYAPGIHGNELIKLIRFCRKLERL-----WILDSIGDRGLGVVAFTCKELQELRV 342
+SL+L + + ++++++ C+ L L WI I DR + V+A + L+EL +
Sbjct: 543 SSLDLRHITELDNETVMEIVKRCKNLSSLNLCLNWI---INDRCVEVIAKEGQNLKELYL 599
Query: 343 FPSGVDNAAVTEEGLVAISAGCPKLHSL-LYFCQQMTNAALITVAKNNSNFTRFRLCILD 401
+ +T+ L+AI + ++ + +C+++T+ +A+++ + R+ L ++
Sbjct: 600 V-----SCKITDYALIAIGRYSVTIETVDVGWCKEITDQGATLIAQSSKSL-RY-LGLMR 652
Query: 402 REKPDPVTMQPLDEG-----FGAIVQSCK 425
+K + +T++ L + F ++Q CK
Sbjct: 653 CDKVNELTVEQLVQQYPHITFSTVLQDCK 681
Score = 48 (22.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 2 MNYFPDEVIEHVFDFVTSQKDRNAVSLVCKSW 33
+N P ++ +F ++ + + SLVCK W
Sbjct: 321 INQLPPSILLKIFSNLSLNERCLSASLVCKYW 352
>UNIPROTKB|Q13309 [details] [associations]
symbol:SKP2 "S-phase kinase-associated protein 2"
species:9606 "Homo sapiens" [GO:0000086 "G2/M transition of mitotic
cell cycle" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=IEA] [GO:0048661
"positive regulation of smooth muscle cell proliferation"
evidence=IEA] [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0071460 "cellular response to cell-matrix adhesion"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=TAS] [GO:0000080 "G1
phase of mitotic cell cycle" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0042802 "identical protein binding"
evidence=IPI] InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256
UniPathway:UPA00143 GO:GO:0005829
Pathway_Interaction_DB:foxopathway Reactome:REACT_6900
Reactome:REACT_115566 GO:GO:0000086 GO:GO:0005654 GO:GO:0000082
GO:GO:0008283 SUPFAM:SSF81383 GO:GO:0016301 GO:GO:0051726
GO:GO:0019005 GO:GO:0004842 GO:GO:0000209 GO:GO:0000084
GO:GO:0031145 GO:GO:0033148 GO:GO:0000080
Pathway_Interaction_DB:foxm1pathway EMBL:CH471119 PDB:2AST
PDBsum:2AST PDB:2ASS PDBsum:2ASS PDB:1LDK PDBsum:1LDK EMBL:AC008942
PDB:1FQV PDB:1FS1 PDB:1FS2 PDBsum:1FQV PDBsum:1FS1 PDBsum:1FS2
KO:K03875 EMBL:U33761 EMBL:AB050979 EMBL:AB050980 EMBL:AB050981
EMBL:AY029177 EMBL:AK291255 EMBL:AK296223 EMBL:BC001441
EMBL:BC007441 IPI:IPI00013294 IPI:IPI00178899 IPI:IPI01012086
PIR:I39171 RefSeq:NP_001230049.1 RefSeq:NP_005974.2
RefSeq:NP_116026.1 UniGene:Hs.23348 ProteinModelPortal:Q13309
SMR:Q13309 DIP:DIP-17011N DIP:DIP-17017N DIP:DIP-31091N
IntAct:Q13309 MINT:MINT-152160 STRING:Q13309 PhosphoSite:Q13309
DMDM:37537922 PaxDb:Q13309 PRIDE:Q13309 DNASU:6502
Ensembl:ENST00000274254 Ensembl:ENST00000274255
Ensembl:ENST00000546211 GeneID:6502 KEGG:hsa:6502 UCSC:uc003jkc.2
UCSC:uc003jkd.3 CTD:6502 GeneCards:GC05P036103 HGNC:HGNC:10901
HPA:CAB013533 MIM:601436 neXtProt:NX_Q13309 PharmGKB:PA35801
eggNOG:NOG263321 HOGENOM:HOG000247037 HOVERGEN:HBG047488
OMA:TIARPTV EvolutionaryTrace:Q13309 GenomeRNAi:6502 NextBio:25275
ArrayExpress:Q13309 Bgee:Q13309 CleanEx:HS_SKP2
Genevestigator:Q13309 GermOnline:ENSG00000145604 Uniprot:Q13309
Length = 424
Score = 121 (47.7 bits), Expect = 0.00034, P = 0.00034
Identities = 75/305 (24%), Positives = 132/305 (43%)
Query: 6 PDEVIEHVFDFVTSQKDRNAVSLVCKSWYKI---ERLSRQSVFIGNCYAISPERVIGRF- 61
PDE++ +F + + VS VCK WY++ E L + G + P+ V GR
Sbjct: 101 PDELLLGIFSCLCLP-ELLKVSGVCKRWYRLASDESLWQTLDLTGK--NLHPD-VTGRLL 156
Query: 62 -PGLKSL----TLKGKP---HFADFNLLPYDWGGWVYP--WVEALAKSRVGLEELRLKRM 111
G+ + + +P HF+ F + D V + + L+ L L+ +
Sbjct: 157 SQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGL 216
Query: 112 VVSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQE-IEVDDNRGQ 170
+SD + L+++ N L L C GF+ L + ++C L EL+L + + Q
Sbjct: 217 RLSDPIVNTLAKNS-NLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQ 275
Query: 171 WISCFPDSCTSLVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPL--DTLQKLLM 228
++ S T + LN S + + + L LV R PNL L L+ +V L D Q+
Sbjct: 276 -VAVAHVSET-ITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFF- 332
Query: 229 RAPQLVDLGIGSFVYDPSSEAYIKL-KATLVKCKSIRSL--SGFLEVVPCCLSAIHPVCQ 285
+ L L + S YD E ++L + +K + + G L+++ L + C
Sbjct: 333 QLNYLQHLSL-SRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCS 391
Query: 286 NLTSL 290
+ T++
Sbjct: 392 HFTTI 396
>TAIR|locus:2145512 [details] [associations]
symbol:EBF2 "EIN3-binding F box protein 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009723 "response to ethylene stimulus" evidence=IMP]
[GO:0010105 "negative regulation of ethylene mediated signaling
pathway" evidence=TAS] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IPI] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0009723
SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0006511 GO:GO:0019005
GO:GO:0010105 InterPro:IPR006553 SMART:SM00367 EMBL:AC006258
eggNOG:NOG300245 HOGENOM:HOG000238885 KO:K14515 EMBL:AJ609239
EMBL:AY485830 EMBL:AK227858 IPI:IPI00517412 RefSeq:NP_197917.1
UniGene:At.19865 UniGene:At.72267 ProteinModelPortal:Q708Y0
SMR:Q708Y0 IntAct:Q708Y0 STRING:Q708Y0 PRIDE:Q708Y0
EnsemblPlants:AT5G25350.1 GeneID:832607 KEGG:ath:AT5G25350
TAIR:At5g25350 InParanoid:Q708Y0 OMA:IGRCCAK PhylomeDB:Q708Y0
ProtClustDB:CLSN2916408 Genevestigator:Q708Y0 Uniprot:Q708Y0
Length = 623
Score = 120 (47.3 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 124/552 (22%), Positives = 211/552 (38%)
Query: 2 MNYFPDEVIEHVFDFVTSQKDRNAVSLVCKSWYKI-ERLSRQSVFIGNCYAISP-ERVIG 59
++ P+E + + + S ++R+A + V K W + +SR V + + E +
Sbjct: 55 IDVLPEECLFEILRRLPSGQERSACACVSKHWLNLLSSISRSEVNESSVQDVEEGEGFLS 114
Query: 60 R-FPGLKSLTLK------GKPHFADFNLLPYDWGGWVYPWVEA-LAKSRVGLEELRLKRM 111
R G K+ L+ G L G+ + L G LR+ +
Sbjct: 115 RSLEGKKATDLRLAAIAVGTSSRGGLGKLQIRGSGFESKVTDVGLGAVAHGCPSLRIVSL 174
Query: 112 ----VVSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDN 167
VSD L ++RS + L L C G T GL AIA NC L +L + N
Sbjct: 175 WNLPAVSDLGLSEIARSCPMIEKLDLSRCPGITDSGLVAIAENCVNLSDLTIDSCSGVGN 234
Query: 168 RGQWISCFPDSCTSLVSLNF-SCLK-GEINLTALERLVARSPNLKSLRLNRA-VPLDTLQ 224
G + C +L S++ SC + G+ + L L L ++L V +L
Sbjct: 235 EG--LRAIARRCVNLRSISIRSCPRIGDQGVAFL--LAQAGSYLTKVKLQMLNVSGLSLA 290
Query: 225 KLLMRAPQLVDLGIGSFVYDPSSEAYIKLKAT-LVKCKSIRSLS--GFLEVVPCCLSAIH 281
+ + DL + ++ A L K KS+ +S G +V L A+
Sbjct: 291 VIGHYGAAVTDLVLHGLQGVNEKGFWVMGNAKGLKKLKSLSVMSCRGMTDVG---LEAVG 347
Query: 282 PVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELR 341
C +L ++L+ + G L+ L + LE L + + G++ F +L+
Sbjct: 348 NGCPDLKHVSLNKCLLVSGKGLVALAKSALSLESLKLEECHRINQFGLMGFLMNCGSKLK 407
Query: 342 VFPS----GVDNAAVTEEGLVAISAGCPKLHSL-LYFCQQMTNAALITVAKNNSNFTRFR 396
F G+ + +E L S C L SL + C +A+L + K
Sbjct: 408 AFSLANCLGISDFN-SESSLP--SPSCSSLRSLSIRCCPGFGDASLAFLGKFCHQLQDVE 464
Query: 397 LCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXX---XTDQVFLYIGM-YAEQLE 452
LC L+ VT D G ++QS +D I + + LE
Sbjct: 465 LCGLNG-----VT----DAGVRELLQSNNVGLVKVNLSECINVSDNTVSAISVCHGRTLE 515
Query: 453 MLSIAFAGN-SDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEV 511
L++ N ++ ++ V C + L+I NT L++D G S + +V
Sbjct: 516 SLNLDGCKNITNASLVAVAKNCYSVNDLDI-----SNT-LVSDHGIKALASSPNHLNLQV 569
Query: 512 -TLGGCQTLAKK 522
++GGC ++ K
Sbjct: 570 LSIGGCSSITDK 581
Score = 47 (21.6 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 18/71 (25%), Positives = 34/71 (47%)
Query: 488 NTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQMEFSLDDRQKV 547
N +L+ ++ L +S+ V+ G + LA LN+++++ S+ D+ K
Sbjct: 527 NASLVAVAKNCYSVNDLDISNTLVSDHGIKALASSPNHLNLQVLSIGGCS--SITDKSKA 584
Query: 548 GKMYLYRTLVG 558
L RTL+G
Sbjct: 585 CIQKLGRTLLG 595
>RGD|1562456 [details] [associations]
symbol:Skp2 "S-phase kinase-associated protein 2, E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IEA;ISO] [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IEA;ISO]
[GO:0000209 "protein polyubiquitination" evidence=IEA;ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA;ISO] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] [GO:0048661 "positive regulation of smooth muscle
cell proliferation" evidence=IMP] [GO:0051726 "regulation of cell
cycle" evidence=IEA;ISO] [GO:0071460 "cellular response to
cell-matrix adhesion" evidence=IEP] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 RGD:1562456 GO:GO:0048661
EMBL:CH474048 SUPFAM:SSF81383 GO:GO:0016301 GO:GO:0071460 KO:K03875
CTD:6502 eggNOG:NOG263321 HOGENOM:HOG000247037 HOVERGEN:HBG047488
GeneTree:ENSGT00390000007918 OrthoDB:EOG4DR9D4 EMBL:BC166459
IPI:IPI00360594 RefSeq:NP_001099886.1 UniGene:Rn.154278 SMR:B2GUZ0
STRING:B2GUZ0 Ensembl:ENSRNOT00000023099 GeneID:294790
KEGG:rno:294790 NextBio:638574 Genevestigator:B2GUZ0 Uniprot:B2GUZ0
Length = 423
Score = 118 (46.6 bits), Expect = 0.00073, P = 0.00073
Identities = 73/305 (23%), Positives = 131/305 (42%)
Query: 6 PDEVIEHVFDFVTSQKDRNAVSLVCKSWYKI---ERLSRQSVFIG-NCYAISPERVIGRF 61
PDE++ +F + + VS VCK WY++ E L + G N + R++ R
Sbjct: 101 PDELLLGIFSCLCLP-ELLRVSGVCKRWYRLSLDESLWQSLDLAGKNLHPDVTVRLLSR- 158
Query: 62 PGLKSL----TLKGKP---HFADFNLLPYDWGGWVYPW--VEALAKSRVGLEELRLKRMV 112
G+ + + +P F+ F + D V + + L+ L L+ +
Sbjct: 159 -GVVAFRCPRSFMEQPLGESFSSFRVQHMDLSNSVINVSNLHGILSECSKLQNLSLEGLQ 217
Query: 113 VSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQE-IEVDDNRGQW 171
+SD + L+++ N L L C GF+ +A + ++C L EL+L + + Q
Sbjct: 218 LSDPIVTTLAQN-ENLVRLNLCGCSGFSESAVATLLSSCSRLDELNLSWCFDFTEKHVQA 276
Query: 172 -ISCFPDSCTSLVSLNFSCLKGEINLTALERLVARSPNLKSLRLNRAVPL--DTLQKLLM 228
++ PD+ T L N S + + T L L+ R PNL L L+ ++ L D +
Sbjct: 277 AVAHLPDTLTQL---NLSGYRKNLQKTDLCTLIKRCPNLVRLDLSDSIMLKNDCFPEFF- 332
Query: 229 RAPQLVDLGIGSFVYDPSSEAYIKL-KATLVKCKSIRSL--SGFLEVVPCCLSAIHPVCQ 285
+ L L + S YD E ++L + +K + + G L+++ L + C
Sbjct: 333 QLNYLQHLSL-SRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLREALPRLQINCA 391
Query: 286 NLTSL 290
TS+
Sbjct: 392 YFTSI 396
>FB|FBgn0020257 [details] [associations]
symbol:ppa "partner of paired" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=NAS] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:AE013599 SUPFAM:SSF81383 GO:GO:0019005
GeneTree:ENSGT00700000104023 eggNOG:NOG69615 KO:K10280 OMA:LAMIFSY
EMBL:AF187980 EMBL:AY119098 RefSeq:NP_523812.1 UniGene:Dm.2705
SMR:Q9W214 IntAct:Q9W214 MINT:MINT-1600614 STRING:Q9W214
EnsemblMetazoa:FBtr0071924 GeneID:37602 KEGG:dme:Dmel_CG9952
UCSC:CG9952-RA CTD:37602 FlyBase:FBgn0020257 InParanoid:Q9W214
OrthoDB:EOG4KH19K ChiTaRS:ppa GenomeRNAi:37602 NextBio:804504
Uniprot:Q9W214
Length = 538
Score = 119 (46.9 bits), Expect = 0.00081, P = 0.00081
Identities = 78/311 (25%), Positives = 131/311 (42%)
Query: 222 TLQKLLMRAPQLVDLGI-GSF-VYDPS-SEAYIKLKATLVKCKSIRSLSGFLEVVPCCLS 278
+L+ L++ P L L + G F V D + A+ L K++ LS ++ L
Sbjct: 225 SLKDLVLGVPALTSLNLSGCFNVADMNLGHAF---SVDLPNLKTL-DLSLCKQITDTSLG 280
Query: 279 AIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWILDS--IGDRGLGVVAFTCKE 336
I +NL +L L I L+ + +KL+ L + I D+G+G +A +E
Sbjct: 281 RIAQHLRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSCWHISDQGIGHLAGFSRE 340
Query: 337 LQE--LRVFPSGV-DNAAVTEEGLVAISAGCPKLHSL-LYFCQQMTNAALITVAKNNS-N 391
E L++ G+ D +++E L I+ G L S+ L FC +T++ L +A+
Sbjct: 341 TAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLE 400
Query: 392 FTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQL 451
R C + + M L EG G+ + S +DQ +I +L
Sbjct: 401 QLNLRSC----DNISDIGMAYLTEG-GSGINSLDVSFCDKI----SDQALTHIAQGLYRL 451
Query: 452 EMLSIAFAGNSDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEV 511
LS+ +D GML + +L L I G + +TD G +T+ + +
Sbjct: 452 RSLSLNQCQITDHGMLKIAKALHELENLNI-----GQCSRITDKG-LQTLAEDLTNLKTI 505
Query: 512 TLGGCQTLAKK 522
L GC L+ K
Sbjct: 506 DLYGCTQLSSK 516
>ZFIN|ZDB-GENE-061215-122 [details] [associations]
symbol:zgc:158346 "zgc:158346" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 PROSITE:PS51450 SMART:SM00256
UniPathway:UPA00143 ZFIN:ZDB-GENE-061215-122 GO:GO:0005737
SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0005815
GeneTree:ENSGT00700000104023 InterPro:IPR006553 SMART:SM00367
EMBL:CR450710 EMBL:BC128845 EMBL:BC129207 IPI:IPI00495246
RefSeq:NP_001073511.1 UniGene:Dr.85307 ProteinModelPortal:A1A5X2
Ensembl:ENSDART00000089822 GeneID:569430 KEGG:dre:569430
eggNOG:NOG259371 HOGENOM:HOG000116328 HOVERGEN:HBG051591
InParanoid:A1A5X2 KO:K10273 OMA:LMLETVI OrthoDB:EOG495ZRQ
NextBio:20889672 Bgee:A1A5X2 Uniprot:A1A5X2
Length = 489
Score = 119 (46.9 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 32/73 (43%), Positives = 45/73 (61%)
Query: 93 VEALAKSRVGLEELRL-KRMVVSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANC 151
+E LAKS + L+ L + K +VSD LE L+ + N K L L SCE T GL +AANC
Sbjct: 392 IEHLAKSCLKLKSLDIGKCPLVSDAGLEQLALNSFNLKRLSLKSCESITGRGLQVVAANC 451
Query: 152 RYLRELDLQEIEV 164
L+ L++Q+ +V
Sbjct: 452 FDLQLLNVQDCDV 464
Score = 43 (20.2 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 2 MNYFPDEVIEHVFDFV-TSQKDRNAVSLVCKSWYKI 36
++ PD +F + T+Q R A VC+ WY +
Sbjct: 112 VDILPDHAFLQIFTHLPTNQLCRCA--RVCRRWYNL 145
>UNIPROTKB|E1C3J3 [details] [associations]
symbol:FBXL4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 GO:GO:0005634 SUPFAM:SSF81383
InterPro:IPR006553 SMART:SM00367 CTD:26235 KO:K10270 OMA:EVISEMC
GeneTree:ENSGT00700000104313 EMBL:AADN02002254 EMBL:AADN02002255
EMBL:AADN02002256 IPI:IPI00590056 RefSeq:XP_419825.2
UniGene:Gga.25185 Ensembl:ENSGALT00000024980 GeneID:421798
KEGG:gga:421798 NextBio:20824515 Uniprot:E1C3J3
Length = 620
Score = 119 (46.9 bits), Expect = 0.00099, P = 0.00099
Identities = 64/265 (24%), Positives = 118/265 (44%)
Query: 143 GLAAIAANCRYLRELDLQEIEVDDNRGQWIS--CFP---DSCTSLVSLNFS-CLKGEINL 196
G +++ R+L+ + + ++ + G +++ C + C +L LN S C K I
Sbjct: 358 GAISVSGFSRFLKVCGSELVRLELSCGHFLNETCLEVITEMCPNLQELNLSSCDK--IPP 415
Query: 197 TALERLVARSPNLKSLRLNRA-VPLDTLQKLLMRAPQLVDLGIGSFVYDPSSEAYIKLKA 255
A +A+ +LK L L R V L +L +L L +GS V E Y + +
Sbjct: 416 QAFNH-IAKVGSLKRLVLYRTKVEQTALLSILNFCSELQHLSLGSCVM---IEDYDLIAS 471
Query: 256 TL-VKCKSIRSLSGFL--EVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNE--LIKLIRFC 310
+ KCK +RSL + + ++ + CQ L L+L + P + + L R
Sbjct: 472 MMGAKCKKLRSLDLWRCKNITENGIAELASGCQLLEELDLGWCPTLQSSTGCFTNLARKL 531
Query: 311 RKLERLWILD--SIGDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKLH 368
L++L++ S+ D + +A C L++L + + + V+ L + C L
Sbjct: 532 PNLQKLFLTANRSVCDTDIEELAANCTHLRQLDILGTRM----VSPASLRKLLESCKDLS 587
Query: 369 SL-LYFCQQMTNAALITVAKNNSNF 392
L + FC Q+ N ++ + N+NF
Sbjct: 588 LLDVSFCSQIDNRVVLEL---NANF 609
>RGD|1305724 [details] [associations]
symbol:Fbxl4 "F-box and leucine-rich repeat protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181 SMART:SM00256
RGD:1305724 GO:GO:0005634 SUPFAM:SSF81383 EMBL:CH473962
InterPro:IPR006553 SMART:SM00367 eggNOG:NOG287004
HOGENOM:HOG000006948 HOVERGEN:HBG051588 OrthoDB:EOG4XSKPD
OMA:EVISEMC GeneTree:ENSGT00700000104313 EMBL:BC161859
IPI:IPI00779606 UniGene:Rn.12566 Ensembl:ENSRNOT00000061128
UCSC:RGD:1305724 Genevestigator:B1WBR8 Uniprot:B1WBR8
Length = 621
Score = 119 (46.9 bits), Expect = 0.00099, P = 0.00099
Identities = 60/268 (22%), Positives = 125/268 (46%)
Query: 143 GLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTSLVSLNFSCLKGEINLTALERL 202
G +++ R+L+ + + ++ + +++ D+C ++S L+ ++NL++ ++L
Sbjct: 359 GFISVSGFSRFLKVCGSELVRLELSCSHFLN---DACLEVISEMCPNLQ-DLNLSSCDKL 414
Query: 203 -------VARSPNLKSLRLNRA-VPLDTLQKLLMRAPQLVDLGIGSFVYDPSSEAYIKLK 254
+A+ +LK L L R V L +L +L L +GS V E Y +
Sbjct: 415 PPQAFGHIAKLRSLKRLILYRTKVEQTALLSILNFCAELQHLSLGSCVM---IEDYDVIA 471
Query: 255 ATL-VKCKSIRSLSGFL--EVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNE--LIKLIRF 309
+ + KCKS+R+L + + ++ + C L L+L + P + + +L R
Sbjct: 472 SMIGAKCKSLRTLDLWRCKNITENGIAELASGCALLEELDLGWCPTLQSSTGCFARLARQ 531
Query: 310 CRKLERLWILD--SIGDRGLGVVAFTCKELQELRVFPSGVDNAAVTEEGLVAISAGCPKL 367
L++L++ S+ D + +A C LQ+L + + + V+ L + C L
Sbjct: 532 LPNLQKLFLTANRSVCDTDIEELASNCTRLQQLDILGTRM----VSPASLRKLLESCKDL 587
Query: 368 HSL-LYFCQQMTNAALITVAKNNSNFTR 394
L + FC Q+ N A++ + N++F +
Sbjct: 588 SLLDVSFCSQIDNRAVLEL---NASFPK 612
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.139 0.423 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 570 559 0.00099 119 3 11 22 0.49 33
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 84
No. of states in DFA: 623 (66 KB)
Total size of DFA: 326 KB (2165 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 46.44u 0.14s 46.58t Elapsed: 00:00:02
Total cpu time: 46.46u 0.14s 46.60t Elapsed: 00:00:02
Start: Mon May 20 22:19:21 2013 End: Mon May 20 22:19:23 2013