Your job contains 1 sequence.
>008326
MTEDSHHTFSSDDSAISTDGSSQTRQRKKRKWDQPAESLINFPLASFGISLPGVPVAPVV
PAPAAAAFFTNPPVASGATVPPVVLQGPLPPKFNQPKVQDELIIAREIVINDSESSVRYK
LTKRHTQEEIQKCTGAVVITRGKYRLPNAPPDGEKPLYLHISAGAHVKTAERILAVDHAA
AMVEEMLKQGHAGFPTLQTVMGNGVQAMSTSVFLGFDADASLNIAARIRGPNDQYINHIM
NETGATVLLRGRGSGNSEGLQGEEVHQPLHLFLSSNNPKSLEEAKRLAENLLDTISAECG
ASRVSSCKVYNAVPPPQQLLTGIQGFGNEQKLNAGSAVILTSTVNLSSVPLAPSVPGVTT
VYSQGMMLQSGGILNSVQPQQNIVGYPQPVSTGGTSYSGYEGIYPQATPLQQVALALRQS
SSPLTSLVAPTASVSSTATTSTTSTAMSEKEKRPPQKRKFQELPVGSKGPAKHNQGSEIP
NRSELSANLDVRNVSNMPPPSKLVQPVDNGMPHPPPRNMPPPPPPKFTLLAPTAKLHDKN
NSLNKTKSDNIPVVSDTLVKLMEYGEDDDD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008326
(570 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2093792 - symbol:RIK "RS2-interacting KH prote... 1059 1.6e-115 2
UNIPROTKB|Q32SG5 - symbol:Q32SG5 "Protein RIK" species:45... 913 8.6e-100 2
MGI|MGI:1921450 - symbol:2810403A07Rik "RIKEN cDNA 281040... 204 2.7e-22 3
ASPGD|ASPL0000075827 - symbol:AN4431 species:162425 "Emer... 191 1.7e-11 2
POMBASE|SPAC30D11.14c - symbol:SPAC30D11.14c "RNA-binding... 151 1.9e-11 2
>TAIR|locus:2093792 [details] [associations]
symbol:RIK "RS2-interacting KH protein" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0008150 "biological_process" evidence=ND] [GO:0003723 "RNA
binding" evidence=TAS] InterPro:IPR004087 PROSITE:PS50084
SMART:SM00322 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003723 EMBL:AP001309 eggNOG:NOG304543 EMBL:AY940684
EMBL:AY065141 EMBL:AY081591 IPI:IPI00538701 IPI:IPI00866787
RefSeq:NP_566850.3 UniGene:At.21201 ProteinModelPortal:Q9LIA4
SMR:Q9LIA4 IntAct:Q9LIA4 STRING:Q9LIA4 EnsemblPlants:AT3G29390.1
GeneID:822600 KEGG:ath:AT3G29390 TAIR:At3g29390
HOGENOM:HOG000239854 InParanoid:Q9LIA4 OMA:YPQATPL PhylomeDB:Q9LIA4
ProtClustDB:CLSN2680882 Genevestigator:Q9LIA4 Uniprot:Q9LIA4
Length = 578
Score = 1059 (377.8 bits), Expect = 1.6e-115, Sum P(2) = 1.6e-115
Identities = 256/512 (50%), Positives = 313/512 (61%)
Query: 92 KFNQPKVQDELIIAREIVINDSESSVRYKLTKRHTQEEIQKCTGAVVITRGKYRLPNAPP 151
K NQPK+QDE+IIAREIVIND+E+S+R++LTKR TQE+IQ+ TGAVVITRGKYR PNAPP
Sbjct: 76 KVNQPKIQDEVIIAREIVINDAEASLRHRLTKRSTQEDIQRSTGAVVITRGKYRPPNAPP 135
Query: 152 DGEKPLYLHISAGAHVK---TAERILAVDHAAAMVEEMLKQ---GHAGFPTLQTVMGNGV 205
DGEKPLYLHISA A ++ T ERILAVD AAAM+EEM+KQ G LQTV
Sbjct: 136 DGEKPLYLHISAAAQLQLKETTERILAVDRAAAMIEEMMKQKSISQIGSVGLQTV----- 190
Query: 206 QAMSTSVFLGFDADASLNIAARIRGPNDQYINHIMNETGATVLLRGRGSGNSEGLQGEEV 265
+ +ST V+LGF+AD S N+AARIRGPNDQYINHIMNETGATV+LRGRGSG+ E G+E
Sbjct: 191 KMLSTCVYLGFEADPSSNVAARIRGPNDQYINHIMNETGATVVLRGRGSGSLENQHGDEA 250
Query: 266 HQPLHLFLSSNNPKSLEEAKRLAENLLDTISAECGASRVSSCKVYNAVPPPQQLLTGIQG 325
PLHL LS +NPKS+++AKRLAENL+DTIS E GASRVSS KVY AVPPPQQL++G G
Sbjct: 251 QLPLHLLLSGSNPKSIDDAKRLAENLMDTISVEFGASRVSSSKVYGAVPPPQQLISGAPG 310
Query: 326 FGNEQKLNAGSAVILTSTVNLSSVPLAPS---VPGVTTVYSQGMMLQSGGILNSVQPQQN 382
E + N S L +++ +++ P A S V T++Y Q ++QS GI N
Sbjct: 311 SDQENQ-NLISTYGLMTSIPITAPPYAVSSFPVTPATSLYPQFPVMQSLGISNG------ 363
Query: 383 IVGYPQPVXXXXXXXXXXEGIYPQATPLQQVALALRQSSSPLXXXXXXXXXXXXXXXXXX 442
G QPV GIYPQATPLQQVA L+QS SP+
Sbjct: 364 --GPSQPVAGGTSYSGYA-GIYPQATPLQQVAQVLKQSISPVISTVPPTMLTATSLSIPS 420
Query: 443 XXXXXXEKEKRPPQKRKFQELPVGSKGPAKHNQGSEIPNRSEL--SANL-----DVRNVS 495
E E+RPP+KRKFQELP K P K Q SE+ ++ SAN R+V
Sbjct: 421 DNASN-EMERRPPRKRKFQELPADCKVPEKDKQQSELAMTGDVTPSANRVRSPPSPRSVM 479
Query: 496 NMPPPSKLVQPVDNGMXXXXXXX---------XXXXXXXK--------FTLLAPTAKLHD 538
PPP + P M K FTL ++L D
Sbjct: 480 PPPPPKTIAPPPSKTMSPPSSKSMLPPPPRSKTMSPLSSKSMLPPPPRFTLTTQRSRLQD 539
Query: 539 KNNSLNKTKSDNIPVVSDTLVKLMEYGEDDDD 570
N ++ K + +P DTL+KLMEYG+D+DD
Sbjct: 540 --NHISVKKPNPVP---DTLIKLMEYGDDEDD 566
Score = 100 (40.3 bits), Expect = 1.6e-115, Sum P(2) = 1.6e-115
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 1 MTEDSHHTFSSDDSAISTDGSSQTRQRKKRKWDQPAESLI 40
MTED+ + +T+ +S+TRQR+KRKWD+PAE L+
Sbjct: 1 MTEDNDEARVPLSDSSTTNDASRTRQRRKRKWDKPAEQLV 40
>UNIPROTKB|Q32SG5 [details] [associations]
symbol:Q32SG5 "Protein RIK" species:4577 "Zea mays"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR004087
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 GO:GO:0003723
EMBL:AY940679 RefSeq:NP_001105836.1 UniGene:Zm.14958
ProteinModelPortal:Q32SG5 IntAct:Q32SG5 GeneID:732737
KEGG:zma:732737 Gramene:Q32SG5 Uniprot:Q32SG5
Length = 616
Score = 913 (326.5 bits), Expect = 8.6e-100, Sum P(2) = 8.6e-100
Identities = 218/430 (50%), Positives = 264/430 (61%)
Query: 92 KFNQPKVQDELIIAREIVINDSESSVRYKLTKRHTQEEIQKCTGAVVITRGKYRLPNAPP 151
K +Q K+ DE +IAREIVIND++ SVRYKLTKR TQEEIQKCT V+ITRGKY PN P
Sbjct: 100 KLSQAKIPDE-VIAREIVINDADPSVRYKLTKRQTQEEIQKCTNTVIITRGKYHPPNLLP 158
Query: 152 DGEKPLYLHISAGAHVK-TAERILAVDHAAAMVEEMLKQGHAGFPT---LQTVMGNGVQA 207
DGEKPLYLHISAG+ +K TAERI AVD AA+M+EE+LKQG + G V+
Sbjct: 159 DGEKPLYLHISAGSQLKDTAERIKAVDRAASMIEEILKQGTTSESISVPFSSSTGQAVRP 218
Query: 208 MSTSVFLGFDADASLNIAARIRGPNDQYINHIMNETGATVLLRGRGSGNSEGLQGEEVHQ 267
S SVFLGFDAD SLNI ARIRGPNDQYINHIM ETG TV+LRG+ S N E Q
Sbjct: 219 FSASVFLGFDADPSLNITARIRGPNDQYINHIMKETGVTVVLRGKDSENLGSCHSEASQQ 278
Query: 268 PLHLFLSSNNPKSLEEAKRLAENLLDTISAECGASRVSSCKVYNAVPPPQQLLTGIQGFG 327
PLHL+L+S + K+LE AK LAENLLDT++AE GASR+SS KVY AVPPPQQLL G+ G
Sbjct: 279 PLHLYLTSMHLKNLEAAKVLAENLLDTVAAEFGASRISSSKVYGAVPPPQQLLAGVDTSG 338
Query: 328 NEQKLN--AGSAVILTSTVNLSSVP-LAPSVPGVTTVYSQGMMLQSGGILNSVQPQQNIV 384
+ ++ G V+ +T + +S +AP V TV QSG S P + +
Sbjct: 339 TKSDVHYIVGPNVLSGATHSFASTGVIAPVVAPAVTV-------QSGAPTYSGVPLPSNM 391
Query: 385 GYPQPVXXXXXXXXXXEGIYPQATPLQQVALALRQSSSPLXXXXXXXXXXXXXXXXXXXX 444
YP P IYPQATPLQQ+A L+ +SS
Sbjct: 392 AYPIPPANGGAFYSGYGDIYPQATPLQQLAFTLKHASSS-ATQAVPVTSTPTSMATKGNS 450
Query: 445 XXXXEKEKRPPQKRKFQELPVGSKGPAKHNQGSEIPNRSELSANLDVR-NV--SNMPPPS 501
E +KR +RKFQELPV SKGPA +Q S+ ++ + LD N+ S++ PP
Sbjct: 451 ILDAEMDKR--SRRKFQELPV-SKGPATESQNSQQGSKF-VKTGLDSSGNIGSSSIAPPK 506
Query: 502 KLVQPVDNGM 511
K V P NGM
Sbjct: 507 K-VHPGSNGM 515
Score = 97 (39.2 bits), Expect = 8.6e-100, Sum P(2) = 8.6e-100
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 1 MTEDSHHTFSSDDSAISTDGSSQTRQRKKRKWDQPAESLINFPLASFGIS 50
MTED H + D+ A S Q+ +RKKRKWDQPAE L++ + + +S
Sbjct: 1 MTEDRAHKVA-DEPAAS---GRQSPERKKRKWDQPAEDLVSAAVTAAAVS 46
>MGI|MGI:1921450 [details] [associations]
symbol:2810403A07Rik "RIKEN cDNA 2810403A07 gene"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] MGI:MGI:1921450
EMBL:AK173057 EMBL:AK012969 EMBL:AK020778 EMBL:AK038617
EMBL:AK083018 EMBL:AK164337 EMBL:AK170490 EMBL:BC006621
IPI:IPI00112125 IPI:IPI00473448 IPI:IPI00855074 IPI:IPI00855148
RefSeq:NP_083090.2 UniGene:Mm.251800 ProteinModelPortal:Q3TCX3
SMR:Q3TCX3 STRING:Q3TCX3 PhosphoSite:Q3TCX3 PRIDE:Q3TCX3
Ensembl:ENSMUST00000029696 GeneID:74200 KEGG:mmu:74200
UCSC:uc008pwe.2 UCSC:uc008pwf.2 UCSC:uc008pwg.2 eggNOG:NOG304543
GeneTree:ENSGT00510000047412 HOGENOM:HOG000067879
HOVERGEN:HBG099830 InParanoid:Q3TCX3 OMA:TGQSPMS OrthoDB:EOG4N30NT
NextBio:340086 Bgee:Q3TCX3 CleanEx:MM_2810403A07RIK
Genevestigator:Q3TCX3 Uniprot:Q3TCX3
Length = 612
Score = 204 (76.9 bits), Expect = 2.7e-22, Sum P(3) = 2.7e-22
Identities = 44/115 (38%), Positives = 68/115 (59%)
Query: 203 NGVQAMSTSVFLGFD-ADASLNIAARIRGPNDQYINHIMNETGATVLLRGRGSGNSEGLQ 261
+G+ + +F+G + A + N+ ++ GP Y+ HI ETGA V LRG+GSG E
Sbjct: 228 SGMHYVQDKLFVGLEHAVPTFNVKEKVEGPGCSYLQHIQIETGAKVFLRGKGSGCIEPAS 287
Query: 262 GEEVHQPLHLFLSSNNPKSLEEAKRLAENLLDTISAECGASRVSSCKVYNAVPPP 316
G E +P+++++S P+ L AK+L ENLL T+ AE SR + ++ AVP P
Sbjct: 288 GREAFEPMYIYISHPKPEGLAAAKKLCENLLQTVHAEY--SRFVN-QINTAVPLP 339
Score = 132 (51.5 bits), Expect = 2.7e-22, Sum P(3) = 2.7e-22
Identities = 34/97 (35%), Positives = 54/97 (55%)
Query: 97 KVQDELIIAREIVINDSESSVRYKLTKRHTQEEIQKCTGAVVITRGKYRLPNAPPD---G 153
K +D+L++A E+ IND + R LT+ TQ+EI + +GA V TRG++ G
Sbjct: 99 KSKDDLVVA-EVEINDVPLTCRNLLTRGQTQDEISRLSGAAVSTRGRFMTTEEKAKVGPG 157
Query: 154 EKPLYLHISAGAHVKTAERILAVDHAAAMVEEMLKQG 190
++PLYLH+ +T E VD A ++E++ G
Sbjct: 158 DRPLYLHVQG----QTRE---LVDRAVNRIKEIITNG 187
Score = 40 (19.1 bits), Expect = 2.7e-22, Sum P(3) = 2.7e-22
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 310 YNAVPPPQQ 318
Y VPPPQQ
Sbjct: 366 YPVVPPPQQ 374
>ASPGD|ASPL0000075827 [details] [associations]
symbol:AN4431 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0003723 EMBL:BN001303
EnsemblFungi:CADANIAT00006023 HOGENOM:HOG000188522 OMA:QIKGRGS
Uniprot:C8V8Q8
Length = 466
Score = 191 (72.3 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 56/202 (27%), Positives = 97/202 (48%)
Query: 106 REIVINDSESSVRYKLTKRHTQEEIQKCTGAVVITRGKYRLPNAPPDGEKP-LYLHISAG 164
++I IND + RY LTK TQ+ I+ TGA V TRG Y + P LYLH+++
Sbjct: 123 KDIEINDLRN--RYTLTKGSTQKMIKDETGADVTTRGNYYPDKSMATAANPPLYLHVTS- 179
Query: 165 AHVKTAERILAVDHAAAMVEEMLKQGHAGFPTLQTVMGNGVQAMSTSVF----------- 213
T++ ++ A A++E+++K+ + + + F
Sbjct: 180 ----TSKE--GLEKAVALIEDLMKKELPNLVDERRFRRREPEQVERDEFGRRKWPEEKIP 233
Query: 214 LGFDADASLNIAARIRGPNDQYINHIMNETGATVLLRGRGSGNSEGLQGEEVHQPLHLFL 273
+G + N+ A++ G Y+ HI +T V ++GRGSG E G E ++L +
Sbjct: 234 VGLEPIPGFNLRAQVVGQGGMYVKHIQQQTRCKVQIKGRGSGFLEPSTGRESDDAMYLHV 293
Query: 274 SSNNPKSLEEAKRLAENLLDTI 295
+ +P ++ AK L E+LL+ +
Sbjct: 294 AGPDPNEVQRAKALCEDLLNNV 315
Score = 38 (18.4 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 310 YNAVPPPQQL 319
Y+AVPPP L
Sbjct: 457 YSAVPPPPGL 466
>POMBASE|SPAC30D11.14c [details] [associations]
symbol:SPAC30D11.14c "RNA-binding protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003723 "RNA binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0045292 "mRNA
cis splicing, via spliceosome" evidence=NAS] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 SMART:SM00322 PomBase:SPAC30D11.14c
GO:GO:0005634 EMBL:CU329670 GO:GO:0003723 GO:GO:0045292
eggNOG:NOG304543 PIR:T38585 RefSeq:NP_593203.1
ProteinModelPortal:Q09911 EnsemblFungi:SPAC30D11.14c.1
GeneID:2542249 KEGG:spo:SPAC30D11.14c OMA:DIDINDQ OrthoDB:EOG4VDT7M
NextBio:20803314 Uniprot:Q09911
Length = 534
Score = 151 (58.2 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 43/169 (25%), Positives = 77/169 (45%)
Query: 208 MSTSVFLGFDADASLNIAARIRGPNDQYINHIMNETGATVLLRGRGSGNSEGLQGEEVHQ 267
+ V++ ++ I GP Y+ HI ET V ++G+GS E E +
Sbjct: 289 LEEKVYINLTPSRGFHLRQAIVGPQGAYVKHIQQETRTRVQIKGQGSAFIEPSTNRESDE 348
Query: 268 PLHLFLSSNNPKSLEEAKRLAENLLDTISAECGA--------SRVSSCKVYNAVPPPQQL 319
P+HL + S++P +++ AK L E+L+ ++ + A + + YN PP +
Sbjct: 349 PIHLCIMSHDPNAIQRAKVLCEDLIASVHQQYKAWKSQPKDRDQNQGNRAYN--PPNRNQ 406
Query: 320 LTGIQGFGNE--QKLNAGSAVILTSTVNLSSVPLAPSV------PGVTT 360
+ E Q NA A ++T ++ + S+P P + PGVT+
Sbjct: 407 AFSARDSRQEKTQPTNASPAPLVTPSLPVPSIPAVPGMEAMAMPPGVTS 455
Score = 83 (34.3 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 20/66 (30%), Positives = 37/66 (56%)
Query: 98 VQDELIIAREIVINDSESSVRYKLTKRHTQEEIQKCTGAVVITRGKYRLPNAP--PDGEK 155
++ + + +++ IN+ + RY L + T EI+ +G + ++G+Y PN D +
Sbjct: 160 IEGDGVFMQDVEINNVRN--RYILVRASTLSEIENKSGVQLFSKGRY-YPNKALATDKDP 216
Query: 156 PLYLHI 161
PLYLHI
Sbjct: 217 PLYLHI 222
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.129 0.361 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 570 486 0.00081 119 3 11 23 0.48 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 607 (65 KB)
Total size of DFA: 248 KB (2133 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 43.25u 0.14s 43.39t Elapsed: 00:00:02
Total cpu time: 43.25u 0.14s 43.39t Elapsed: 00:00:02
Start: Mon May 20 22:23:40 2013 End: Mon May 20 22:23:42 2013