BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008329
(570 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B7KBH7|CLPX_CYAP7 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Cyanothece
sp. (strain PCC 7424) GN=clpX PE=3 SV=1
Length = 447
Score = 327 bits (839), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 213/290 (73%), Gaps = 15/290 (5%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P P+EI K LD++VIGQ AKKVLSVAVYNHY R+ + +++ T G D
Sbjct: 79 QIPKPREIKKYLDEYVIGQNEAKKVLSVAVYNHYKRLSDIQAKR---------TGTGATD 129
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL+KSNILLMGPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 130 DPVELQKSNILLMGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 189
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTV NVP +
Sbjct: 190 LQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVPPQ 249
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP D IQIDT +ILFICGGAFV ++K + +R S+GF P A G +
Sbjct: 250 GGRKHPYQDCIQIDTSNILFICGGAFVGLDKIVEQRLGKKSMGFIRP------AEGTSKE 303
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR 553
++ L++ +E DL+ +G+IPEFVGR PV+ SL L E+ L+ PR
Sbjct: 304 KWSADLLKQLEPDDLVKFGMIPEFVGRIPVMASLDPLDEDALIAILTQPR 353
>sp|B7JW74|CLPX_CYAP8 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Cyanothece
sp. (strain PCC 8801) GN=clpX PE=3 SV=1
Length = 448
Score = 327 bits (839), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 211/291 (72%), Gaps = 16/291 (5%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
N+ P P+EI K LD++VIGQ+ AKKVLSVAVYNHY R+ S GE +S
Sbjct: 80 NQIPKPREIKKYLDEYVIGQDEAKKVLSVAVYNHYKRL----SLASKPGEETS------- 128
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
+D +EL+KSNILLMGPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +
Sbjct: 129 EDHIELQKSNILLMGPTGSGKTLLAQTLAQILDVPFAVADATTLTEAGYVGEDVENILLR 188
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+ NVP
Sbjct: 189 LLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTIANVPP 248
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP D IQIDT +ILFICGGAFV ++K I +RR S+GF P N +
Sbjct: 249 QGGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIEQRRGKKSMGFIRPGDTNQ-----SK 303
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR 553
+ LM+ E DL+ +G+IPEFVGR PV+ SL L E L+ PR
Sbjct: 304 EKRAADLMQQAEPDDLVKFGMIPEFVGRIPVMASLEPLDEETLIAILTQPR 354
>sp|A4XTZ6|CLPX_PSEMY ATP-dependent Clp protease ATP-binding subunit ClpX OS=Pseudomonas
mendocina (strain ymp) GN=clpX PE=3 SV=1
Length = 426
Score = 324 bits (831), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 171/310 (55%), Positives = 215/310 (69%), Gaps = 25/310 (8%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P PKEI LD++VIGQERAKKVLSVAVYNHY R+ N+ +K
Sbjct: 62 AHKLPAPKEISAILDQYVIGQERAKKVLSVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 --DDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 164
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 224
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGFGA VR+ +
Sbjct: 225 PQGGRKHPQQEFLQVDTRNILFICGGAFAGLEKVIQARSTKGGIGFGAEVRSKQEGKKIG 284
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR--FYKLPM 559
++ + VE DL+ +GLIPEFVGR PV+ +L L E LVQ P+ K
Sbjct: 285 ES------LREVEPDDLVKFGLIPEFVGRLPVIATLEELDEAALVQILTEPKNALTKQYA 338
Query: 560 SLSNLTGTDI 569
L + G D+
Sbjct: 339 KLFEMEGVDL 348
>sp|B8GNT9|CLPX_THISH ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=clpX PE=3
SV=1
Length = 425
Score = 323 bits (828), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 170/314 (54%), Positives = 218/314 (69%), Gaps = 25/314 (7%)
Query: 258 GSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCT 317
G+ +G+K P P EI K LD++VIGQ+RAKK+L+VAVYNHY R+ +S+
Sbjct: 58 GAAVGDKLPKPHEIKKILDEYVIGQDRAKKILAVAVYNHYKRLEARNSK----------- 106
Query: 318 TDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVE 377
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE
Sbjct: 107 ------DEVELAKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVE 160
Query: 378 SILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTV 437
+I+ KLL DY+V AQ GIVYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT+
Sbjct: 161 NIIQKLLQKCDYDVEKAQTGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLIEGTI 220
Query: 438 VNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRA 497
+VP +G RKHP+ + +Q+DT +ILFI GGAF ++K I +R + IGF A V++
Sbjct: 221 ASVPPQGGRKHPQQEFLQVDTHNILFIVGGAFAGLDKVIRDRTEKGGIGFSAKVKSKEEK 280
Query: 498 GGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR--FY 555
G V S + VE DLI YGLIPEFVGR PV+ +L L E+ L+Q P+
Sbjct: 281 GPV------SRTLSGVEPEDLIKYGLIPEFVGRLPVVATLEELDEDALIQILTEPKNALT 334
Query: 556 KLPMSLSNLTGTDI 569
K L + G DI
Sbjct: 335 KQYGKLFEMEGVDI 348
>sp|A1WUM6|CLPX_HALHL ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Halorhodospira halophila (strain DSM 244 / SL1)
GN=clpX PE=3 SV=1
Length = 426
Score = 323 bits (828), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 164/297 (55%), Positives = 209/297 (70%), Gaps = 23/297 (7%)
Query: 257 GGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSC 316
G + G P P EI + LD++VIGQE AKKVLSVAVYNHY R+ + +SQ
Sbjct: 58 GAATEGGGLPRPHEINRELDQYVIGQEHAKKVLSVAVYNHYKRLESRTSQ---------- 107
Query: 317 TTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDV 376
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDV
Sbjct: 108 -------DDVELTKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDV 160
Query: 377 ESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 436
E+I+ KLL DY+V AQ GIVYIDE+DK+++KA++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 161 ENIIQKLLQKCDYDVEKAQHGIVYIDEIDKVSRKADNPSITRDVSGEGVQQALLKLIEGT 220
Query: 437 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMR 496
+VP +G RKHP+ + +Q+DT ++LFICGGAF ++K I ER + IGF A ++
Sbjct: 221 TASVPPQGGRKHPQQEFVQVDTSNMLFICGGAFAGLDKVIQERSERGGIGFSAEIKGEGE 280
Query: 497 AGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR 553
V + ++TVE SDL+ YGLIPEFVGR PV+ +L L + LVQ P+
Sbjct: 281 RASVGET------LQTVEPSDLVRYGLIPEFVGRLPVIATLNELDQEALVQILREPK 331
>sp|B1J693|CLPX_PSEPW ATP-dependent Clp protease ATP-binding subunit ClpX OS=Pseudomonas
putida (strain W619) GN=clpX PE=3 SV=1
Length = 427
Score = 323 bits (827), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 168/292 (57%), Positives = 210/292 (71%), Gaps = 22/292 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVLSVAVYNHY R+ +Q+ G
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLSVAVYNHYKRL----NQRDKKG---------- 107
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 108 --DEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGFGA VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFGAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR 553
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q P+
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPK 331
>sp|B0JL96|CLPX_MICAN ATP-dependent Clp protease ATP-binding subunit ClpX OS=Microcystis
aeruginosa (strain NIES-843) GN=clpX PE=3 SV=1
Length = 444
Score = 322 bits (825), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 165/305 (54%), Positives = 212/305 (69%), Gaps = 20/305 (6%)
Query: 249 SGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKR 308
SG W + P P+EI K LD +VIGQ AKKVLSVAVYNHY R+ + +QK
Sbjct: 66 SGQNKTTW------EQIPKPREIKKHLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKA 119
Query: 309 SAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQ 368
G +D++EL+KSNILL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+
Sbjct: 120 GGGSP---------EDSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTE 170
Query: 369 AGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQA 428
AGYVGEDVE+IL +LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQA
Sbjct: 171 AGYVGEDVENILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQA 230
Query: 429 LLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFG 488
LLKMLEGT+ NVP +G RKHP D IQIDT +ILFICGGAFV ++K I +R S+GF
Sbjct: 231 LLKMLEGTIANVPPQGGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFI 290
Query: 489 APVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQK 548
P G + V + L++ + DL+ +G+IPEFVGR P+L +L L E L+
Sbjct: 291 QP-----GDGQASKDKVAAGLLKQMTPDDLVKFGMIPEFVGRIPILAALSPLDEEALIAI 345
Query: 549 CHFPR 553
PR
Sbjct: 346 LTQPR 350
>sp|Q5ZUE0|CLPX_LEGPH ATP-dependent Clp protease ATP-binding subunit ClpX OS=Legionella
pneumophila subsp. pneumophila (strain Philadelphia 1 /
ATCC 33152 / DSM 7513) GN=clpX PE=3 SV=2
Length = 424
Score = 322 bits (825), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 170/308 (55%), Positives = 220/308 (71%), Gaps = 25/308 (8%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ PTPKEI LD++VIGQ+ AKKVLSVAVYNHY R+ ++S +
Sbjct: 62 RLPTPKEISNFLDEYVIGQQHAKKVLSVAVYNHYKRLQHKS------------------E 103
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 104 DGVELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKL 163
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L DY+V AQQGIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +
Sbjct: 164 LQKCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 223
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + +Q+DT +ILFICGGAF ++K I ER SSIGF A +++ + D
Sbjct: 224 GGRKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSDKSSIGFSAQLKSKKSS---NDE 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR--FYKLPMSL 561
V S ++ +ES DLI YGLIPEFVGR PV+ +L L E L+ P+ K SL
Sbjct: 281 V--SKVLGQLESDDLIKYGLIPEFVGRLPVVTTLQELDEAALIDILTRPKNALTKQFQSL 338
Query: 562 SNLTGTDI 569
+ G+++
Sbjct: 339 FKMEGSEL 346
>sp|Q5WVJ1|CLPX_LEGPL ATP-dependent Clp protease ATP-binding subunit ClpX OS=Legionella
pneumophila (strain Lens) GN=clpX PE=3 SV=1
Length = 424
Score = 322 bits (825), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 170/308 (55%), Positives = 220/308 (71%), Gaps = 25/308 (8%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ PTPKEI LD++VIGQ+ AKKVLSVAVYNHY R+ ++S +
Sbjct: 62 RLPTPKEISNFLDEYVIGQQHAKKVLSVAVYNHYKRLQHKS------------------E 103
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 104 DGVELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKL 163
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L DY+V AQQGIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +
Sbjct: 164 LQKCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 223
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + +Q+DT +ILFICGGAF ++K I ER SSIGF A +++ + D
Sbjct: 224 GGRKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSDKSSIGFSAQLKSKKSS---NDE 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR--FYKLPMSL 561
V S ++ +ES DLI YGLIPEFVGR PV+ +L L E L+ P+ K SL
Sbjct: 281 V--SKVLGQLESDDLIKYGLIPEFVGRLPVVTTLQELDEAALIDILTRPKNALTKQFQSL 338
Query: 562 SNLTGTDI 569
+ G+++
Sbjct: 339 FKMEGSEL 346
>sp|A5ID16|CLPX_LEGPC ATP-dependent Clp protease ATP-binding subunit ClpX OS=Legionella
pneumophila (strain Corby) GN=clpX PE=3 SV=1
Length = 424
Score = 322 bits (825), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 170/308 (55%), Positives = 220/308 (71%), Gaps = 25/308 (8%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ PTPKEI LD++VIGQ+ AKKVLSVAVYNHY R+ ++S +
Sbjct: 62 RLPTPKEISNFLDEYVIGQQHAKKVLSVAVYNHYKRLQHKS------------------E 103
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 104 DGVELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKL 163
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L DY+V AQQGIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +
Sbjct: 164 LQKCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 223
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + +Q+DT +ILFICGGAF ++K I ER SSIGF A +++ + D
Sbjct: 224 GGRKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSDKSSIGFSAQLKSKKSS---NDE 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR--FYKLPMSL 561
V S ++ +ES DLI YGLIPEFVGR PV+ +L L E L+ P+ K SL
Sbjct: 281 V--SKVLGQLESDDLIKYGLIPEFVGRLPVVTTLQELDEAALIDILTRPKNALTKQFQSL 338
Query: 562 SNLTGTDI 569
+ G+++
Sbjct: 339 FKMEGSEL 346
>sp|Q0VQ89|CLPX_ALCBS ATP-dependent Clp protease ATP-binding subunit ClpX OS=Alcanivorax
borkumensis (strain SK2 / ATCC 700651 / DSM 11573)
GN=clpX PE=3 SV=1
Length = 426
Score = 322 bits (825), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 167/294 (56%), Positives = 212/294 (72%), Gaps = 26/294 (8%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
G + P P EI LD++VIGQERAKKVL+VAVYNHY R+ RS G+
Sbjct: 62 GERLPKPNEIKDTLDEYVIGQERAKKVLAVAVYNHYKRL-------RSGGKGR------- 107
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 108 --DEVELGKSNILLIGPTGSGKTLLAETLARMLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGG 499
+G RKHP+ + +Q+DT ++LFICGGAF ++K I ER + IGF A V++ N R G
Sbjct: 226 PQGGRKHPQQEFLQVDTSNMLFICGGAFAGLDKVIRERSEKGGIGFSAEVKSKDNTRNLG 285
Query: 500 VTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR 553
L+ VE DL+ YGLIPEF+GR PV+ +L L+E+ L+Q PR
Sbjct: 286 --------ELLVDVEPEDLVKYGLIPEFIGRLPVIATLEELSEDALIQILTEPR 331
>sp|A5W634|CLPX_PSEP1 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Pseudomonas
putida (strain F1 / ATCC 700007) GN=clpX PE=3 SV=1
Length = 427
Score = 322 bits (824), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 167/292 (57%), Positives = 210/292 (71%), Gaps = 22/292 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ +Q+ G
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL----NQRDKKG---------- 107
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 108 --DEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGFGA VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFGAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR 553
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q P+
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPK 331
>sp|B0KJG7|CLPX_PSEPG ATP-dependent Clp protease ATP-binding subunit ClpX OS=Pseudomonas
putida (strain GB-1) GN=clpX PE=3 SV=1
Length = 427
Score = 322 bits (824), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 167/292 (57%), Positives = 210/292 (71%), Gaps = 22/292 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ +Q+ G
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL----NQRDKKG---------- 107
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 108 --DEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGFGA VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFGAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR 553
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q P+
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPK 331
>sp|Q88KI9|CLPX_PSEPK ATP-dependent Clp protease ATP-binding subunit ClpX OS=Pseudomonas
putida (strain KT2440) GN=clpX PE=3 SV=1
Length = 442
Score = 322 bits (824), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 167/292 (57%), Positives = 210/292 (71%), Gaps = 22/292 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ +Q+ G
Sbjct: 77 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL----NQRDKKG---------- 122
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 123 --DEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 180
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 181 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 240
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGFGA VR+ V
Sbjct: 241 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFGAEVRSKEEGKKVG 300
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR 553
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q P+
Sbjct: 301 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPK 346
>sp|C3JYJ9|CLPX_PSEFS ATP-dependent Clp protease ATP-binding subunit ClpX OS=Pseudomonas
fluorescens (strain SBW25) GN=clpX PE=3 SV=1
Length = 427
Score = 321 bits (823), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 170/310 (54%), Positives = 216/310 (69%), Gaps = 24/310 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ +Q+ G
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL----NQRDKKG---------- 107
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 108 --DEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I +R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQQRSTRGGIGFSAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR--FYKLPM 559
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q P+ K
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYA 339
Query: 560 SLSNLTGTDI 569
L + G D+
Sbjct: 340 KLFEMEGVDL 349
>sp|Q5X452|CLPX_LEGPA ATP-dependent Clp protease ATP-binding subunit ClpX OS=Legionella
pneumophila (strain Paris) GN=clpX PE=3 SV=1
Length = 424
Score = 321 bits (822), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 168/308 (54%), Positives = 218/308 (70%), Gaps = 25/308 (8%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ PTPKEI LD++VIGQ+ AKKVLSVAVYNHY R+ ++S +
Sbjct: 62 RLPTPKEISNFLDEYVIGQQHAKKVLSVAVYNHYKRLQHKS------------------E 103
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 104 DGVELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKL 163
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L DY+V AQQGIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +
Sbjct: 164 LQKCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 223
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDA 503
G RKHP+ + +Q+DT +ILFICGGAF ++K I ER SSIGF A +++ +
Sbjct: 224 GGRKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSDKSSIGFSAQLKSKKSSND---- 279
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR--FYKLPMSL 561
S ++ +ES DLI YGLIPEFVGR PV+ +L L E L+ P+ K SL
Sbjct: 280 -EASKVLGQLESDDLIKYGLIPEFVGRLPVVTTLQELDEAALIDILTRPKNALTKQFQSL 338
Query: 562 SNLTGTDI 569
+ G+++
Sbjct: 339 FKMEGSEL 346
>sp|B1WUD2|CLPX_CYAA5 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Cyanothece
sp. (strain ATCC 51142) GN=clpX PE=3 SV=1
Length = 435
Score = 321 bits (822), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 204/291 (70%), Gaps = 20/291 (6%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+ P P EI LD++VIGQ+ AKKVLSVAVYNHY R+ S D
Sbjct: 71 KELPKPMEIKDYLDEYVIGQDEAKKVLSVAVYNHYKRL--------------SLVQGKND 116
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
+D +EL+KSNILLMGPTGSGKTLLA+TLA+ + VPF +ADATTLT+AGYVGEDVE+IL +
Sbjct: 117 EDNIELQKSNILLMGPTGSGKTLLAQTLAQVLEVPFAVADATTLTEAGYVGEDVENILLR 176
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTV NVP
Sbjct: 177 LLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVPP 236
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP D IQIDT +ILFICGGAFV +E+ I +R S+GF P + D
Sbjct: 237 QGGRKHPYQDCIQIDTSNILFICGGAFVGLERVIEQRIGKKSMGFVRPGEGQSKEKRAAD 296
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR 553
LM+ VE DL+ +G+IPEFVGR PV+ +L LTE LV PR
Sbjct: 297 ------LMQRVEPDDLVKFGMIPEFVGRIPVMAALNPLTEETLVAILTKPR 341
>sp|Q2JW64|CLPX_SYNJA ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Synechococcus sp. (strain JA-3-3Ab) GN=clpX PE=3 SV=1
Length = 448
Score = 320 bits (821), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 164/284 (57%), Positives = 209/284 (73%), Gaps = 17/284 (5%)
Query: 264 KFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDD 323
+ P P+EI + LD++VIGQE+AKKVLSVAVYNHY KR A +++ + +
Sbjct: 78 QLPKPREIMRYLDQYVIGQEKAKKVLSVAVYNHY---------KRLAAKANPNSLGAAEL 128
Query: 324 DTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKL 383
D VEL+KSNIL++GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 129 DEVELQKSNILVIGPTGSGKTLLAETLARMLDVPFAVADATTLTEAGYVGEDVENILLRL 188
Query: 384 LTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEK 443
L V+D +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+ NVP +
Sbjct: 189 LQVADMDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTIANVPPQ 248
Query: 444 GARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVR--ANMRAGGVT 501
G RKHP D IQIDT +ILFICGGAFV +EK I +R S+GF P A R +
Sbjct: 249 GGRKHPYQDCIQIDTSNILFICGGAFVGLEKVIEQRIGKKSMGFIKPGEQLAVTREQRLA 308
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQL 545
DA ++ +E DLI YG+IPEF+GR PV+ +L L E L
Sbjct: 309 DA------LKALEPEDLIKYGMIPEFIGRLPVVATLDPLDEKAL 346
>sp|A1RL88|CLPX_SHESW ATP-dependent Clp protease ATP-binding subunit ClpX OS=Shewanella
sp. (strain W3-18-1) GN=clpX PE=3 SV=1
Length = 426
Score = 320 bits (821), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 167/292 (57%), Positives = 206/292 (70%), Gaps = 24/292 (8%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K PTP E+ LD +VIGQ+RAKKVLSVAVYNHY R+ N S +
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLKNSSPK---------------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 -DGVELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQ-DSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF +EK I +R S IGFGA V+ G
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK------GEK 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR 553
D S + VE DL+ YGLIPEF+GR PV+ +L L E LVQ P+
Sbjct: 280 DKATISETLSQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPK 331
>sp|A4Y5I3|CLPX_SHEPC ATP-dependent Clp protease ATP-binding subunit ClpX OS=Shewanella
putrefaciens (strain CN-32 / ATCC BAA-453) GN=clpX PE=3
SV=1
Length = 426
Score = 320 bits (821), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 167/292 (57%), Positives = 206/292 (70%), Gaps = 24/292 (8%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K PTP E+ LD +VIGQ+RAKKVLSVAVYNHY R+ N S +
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLKNSSPK---------------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 -DGVELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQ-DSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF +EK I +R S IGFGA V+ G
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK------GEK 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR 553
D S + VE DL+ YGLIPEF+GR PV+ +L L E LVQ P+
Sbjct: 280 DKATISETLSQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPK 331
>sp|Q87YR7|CLPX_PSESM ATP-dependent Clp protease ATP-binding subunit ClpX OS=Pseudomonas
syringae pv. tomato (strain DC3000) GN=clpX PE=3 SV=1
Length = 427
Score = 320 bits (821), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 170/310 (54%), Positives = 216/310 (69%), Gaps = 24/310 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 -NDDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR--FYKLPM 559
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q P+ K
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYA 339
Query: 560 SLSNLTGTDI 569
L + G D+
Sbjct: 340 KLFEMEGVDL 349
>sp|B6ISY6|CLPX_RHOCS ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Rhodospirillum centenum (strain ATCC 51521 / SW)
GN=clpX PE=3 SV=1
Length = 421
Score = 320 bits (821), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/288 (56%), Positives = 211/288 (73%), Gaps = 24/288 (8%)
Query: 266 PTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDT 325
P+P++IC LD +VIGQE AK+VLSVAV+NHY R+ + G +
Sbjct: 64 PSPRDICAVLDDYVIGQEHAKRVLSVAVHNHYKRLAH-----------------GAKHND 106
Query: 326 VELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLLT 385
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 386 VSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGA 445
+DYNV AQ+GIVYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 446 RKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAVV 505
RKHP+ + +Q+DT +ILFICGGAF +E+ I+ R + +SIGFGA VRA D
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIIAARGKGTSIGFGADVRA-------PDERR 279
Query: 506 TSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR 553
T ++ VE DL+ +GLIPEFVGR PV+ +L L EN L++ P+
Sbjct: 280 TGDILREVEPEDLLKFGLIPEFVGRLPVVATLHDLDENALIEILTKPK 327
>sp|Q0HTK8|CLPX_SHESR ATP-dependent Clp protease ATP-binding subunit ClpX OS=Shewanella
sp. (strain MR-7) GN=clpX PE=3 SV=1
Length = 426
Score = 320 bits (821), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 167/292 (57%), Positives = 206/292 (70%), Gaps = 24/292 (8%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K PTP E+ LD +VIGQ+RAKKVLSVAVYNHY R+ N S +
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLRNSSPK---------------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 -DGVELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQ-DSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF +EK I +R S IGFGA V+ G
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK------GEK 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR 553
D S + VE DL+ YGLIPEF+GR PV+ +L L E LVQ P+
Sbjct: 280 DKATISQTLSQVEPEDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSEPK 331
>sp|Q0HHA2|CLPX_SHESM ATP-dependent Clp protease ATP-binding subunit ClpX OS=Shewanella
sp. (strain MR-4) GN=clpX PE=3 SV=1
Length = 426
Score = 320 bits (821), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 167/292 (57%), Positives = 206/292 (70%), Gaps = 24/292 (8%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K PTP E+ LD +VIGQ+RAKKVLSVAVYNHY R+ N S +
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLRNSSPK---------------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 -DGVELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQ-DSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF +EK I +R S IGFGA V+ G
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK------GEK 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR 553
D S + VE DL+ YGLIPEF+GR PV+ +L L E LVQ P+
Sbjct: 280 DKATISQTLSQVEPEDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSEPK 331
>sp|A1VRH7|CLPX_POLNA ATP-dependent Clp protease ATP-binding subunit ClpX OS=Polaromonas
naphthalenivorans (strain CJ2) GN=clpX PE=3 SV=1
Length = 421
Score = 320 bits (821), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 169/305 (55%), Positives = 216/305 (70%), Gaps = 25/305 (8%)
Query: 252 KDGCWGGSNLG---NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKR 308
+D GS G + PTP EI LD +VIGQE AK+ L+VAVYNHY R+ ++ S K+
Sbjct: 49 RDELPSGSEAGEARSDLPTPAEIKATLDGYVIGQEPAKRTLAVAVYNHYKRLRHKESAKK 108
Query: 309 SAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQ 368
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+
Sbjct: 109 ---------------DDVELTKSNILLIGPTGSGKTLLAQTLARTLNVPFVMADATTLTE 153
Query: 369 AGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQA 428
AGYVGEDVE+I+ KLL +Y V AQQGIVYIDE+DKI++K+++ +I+RDVSGEGVQQA
Sbjct: 154 AGYVGEDVENIIQKLLQSCNYEVDRAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQA 213
Query: 429 LLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFG 488
LLK++EGT+ +VP +G RKHP D +Q+DT +ILFICGGAF +EK I R + S IGFG
Sbjct: 214 LLKLMEGTMASVPPQGGRKHPNQDFLQVDTTNILFICGGAFSGLEKVIENRTEASGIGFG 273
Query: 489 APVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQK 548
A V++ +A +T+A + VE DLI +GLIPE VGR PV+ +L L+E+ LVQ
Sbjct: 274 AAVKSK-KARSLTEA------FKDVEPEDLIKFGLIPELVGRMPVIATLAELSEDALVQI 326
Query: 549 CHFPR 553
P+
Sbjct: 327 LTEPK 331
>sp|O67356|CLPX_AQUAE ATP-dependent Clp protease ATP-binding subunit ClpX OS=Aquifex
aeolicus (strain VF5) GN=clpX PE=3 SV=1
Length = 412
Score = 320 bits (821), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 212/291 (72%), Gaps = 26/291 (8%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P++I K LD++VIGQERAKK+LSVAVYNHY RI + + G+ D
Sbjct: 59 IPKPEQIKKILDEYVIGQERAKKILSVAVYNHYKRIKAKEA--------------GLSLD 104
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VELEKSNILL+GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE++L +LL
Sbjct: 105 DVELEKSNILLIGPTGSGKTLLARTLAKILNVPFAIADATSLTEAGYVGEDVENVLVRLL 164
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLN--ISRDVSGEGVQQALLKMLEGTVVNVPE 442
DY+V AAQ+GIVYIDE+DKI KK+ +N I+RDVSGEGVQQALLK++EG+VVNVP
Sbjct: 165 QACDYDVKAAQKGIVYIDEIDKIAKKS-GINPSITRDVSGEGVQQALLKIVEGSVVNVPP 223
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP + IQ+DT DILFICGGAFV +E I +R S +GF A ++ +
Sbjct: 224 QGGRKHPHQEFIQVDTTDILFICGGAFVGLEDIIKQRLGKSRVGFEAEIKKVDK------ 277
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR 553
L+E VE DLI +G+IPEF+GRFPV+ +L LTE++LV+ P+
Sbjct: 278 ---EQDLLELVEPDDLIRFGMIPEFIGRFPVIATLRELTEDELVRILVEPK 325
>sp|Q4ZVM6|CLPX_PSEU2 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Pseudomonas
syringae pv. syringae (strain B728a) GN=clpX PE=3 SV=1
Length = 427
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 170/310 (54%), Positives = 216/310 (69%), Gaps = 24/310 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 -NDDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR--FYKLPM 559
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q P+ K
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYA 339
Query: 560 SLSNLTGTDI 569
L + G D+
Sbjct: 340 KLFEMEGVDL 349
>sp|A0KYL8|CLPX_SHESA ATP-dependent Clp protease ATP-binding subunit ClpX OS=Shewanella
sp. (strain ANA-3) GN=clpX PE=3 SV=1
Length = 426
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 167/292 (57%), Positives = 206/292 (70%), Gaps = 24/292 (8%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K PTP E+ LD +VIGQ+RAKKVLSVAVYNHY R+ N S +
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLRNSSPK---------------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 -DGVELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQ-DSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF +EK I +R S IGFGA V+ G
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK------GEK 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR 553
D S + VE DL+ YGLIPEF+GR PV+ +L L E LVQ P+
Sbjct: 280 DKATISQTLSQVEPEDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSEPK 331
>sp|Q48KY9|CLPX_PSE14 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Pseudomonas
syringae pv. phaseolicola (strain 1448A / Race 6)
GN=clpX PE=3 SV=1
Length = 427
Score = 320 bits (819), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 170/310 (54%), Positives = 216/310 (69%), Gaps = 24/310 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
+D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 -NDDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVDKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR--FYKLPM 559
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q P+ K
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYA 339
Query: 560 SLSNLTGTDI 569
L + G D+
Sbjct: 340 KLFEMEGVDL 349
>sp|B4EU54|CLPX_PROMH ATP-dependent Clp protease ATP-binding subunit ClpX OS=Proteus
mirabilis (strain HI4320) GN=clpX PE=3 SV=1
Length = 423
Score = 320 bits (819), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 169/310 (54%), Positives = 216/310 (69%), Gaps = 26/310 (8%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ PTP EI K LD +VIGQE AKKVL+VAVYNHY R+ N G
Sbjct: 62 SELPTPHEIRKHLDDYVIGQELAKKVLAVAVYNHYKRLRN-----------------GDK 104
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLARY++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 105 ADGVELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQK 164
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 LLQKCDYDVQKAQRGIVYIDEIDKITRKSENPSITRDVSGEGVQQALLKLVEGTVASVPP 224
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER-RQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF ++K +++R S IGFGA V++
Sbjct: 225 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVVAQRLNTHSGIGFGAEVKSQ------N 278
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR--FYKLPM 559
+ L+ VE DLI +GLIPEF+GR PV+ +L L E+ L+Q P+ K
Sbjct: 279 EKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLGELNEDALIQILQEPKNALTKQYQ 338
Query: 560 SLSNLTGTDI 569
+L L G D+
Sbjct: 339 ALFKLEGVDL 348
>sp|Q3K9X0|CLPX_PSEPF ATP-dependent Clp protease ATP-binding subunit ClpX OS=Pseudomonas
fluorescens (strain Pf0-1) GN=clpX PE=3 SV=1
Length = 427
Score = 320 bits (819), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 170/310 (54%), Positives = 215/310 (69%), Gaps = 24/310 (7%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
+K P+PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 AHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKKA------------- 107
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 108 --DDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 165
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 166 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 225
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR+ V
Sbjct: 226 PQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFNAEVRSKEEGKKVG 285
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR--FYKLPM 559
++ + VE DL+ +GLIPEFVGR PVL +L L E L+Q P+ K
Sbjct: 286 ES------LREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYA 339
Query: 560 SLSNLTGTDI 569
L + G D+
Sbjct: 340 KLFEMEGVDL 349
>sp|Q8EG18|CLPX_SHEON ATP-dependent Clp protease ATP-binding subunit ClpX OS=Shewanella
oneidensis (strain MR-1) GN=clpX PE=3 SV=1
Length = 426
Score = 320 bits (819), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 167/292 (57%), Positives = 206/292 (70%), Gaps = 24/292 (8%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K PTP E+ LD +VIGQ+RAKKVLSVAVYNHY R+ N S +
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLKNSSPK---------------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 -DGVELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQ-DSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF +EK I +R S IGFGA V+ G
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK------GEK 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR 553
D S + VE DL+ YGLIPEF+GR PV+ +L L E LVQ P+
Sbjct: 280 DKATISETLSQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSEPK 331
>sp|A1S4X6|CLPX_SHEAM ATP-dependent Clp protease ATP-binding subunit ClpX OS=Shewanella
amazonensis (strain ATCC BAA-1098 / SB2B) GN=clpX PE=3
SV=1
Length = 425
Score = 319 bits (818), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 165/292 (56%), Positives = 210/292 (71%), Gaps = 24/292 (8%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
+K PTP E+ LD +VIGQE+AKKVLSVAVYNHY R+ R+AG
Sbjct: 62 DKLPTPHELRAHLDDYVIGQEKAKKVLSVAVYNHYKRL-------RNAGPK--------- 105
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR++NVPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 -DGVELGKSNILLIGPTGSGKTLLAETLARFLNVPFTMADATTLTEAGYVGEDVENIIQK 164
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP
Sbjct: 165 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPP 224
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF +EK I +R S IGFGA V+ ++
Sbjct: 225 QGGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRTHTGSGIGFGAQVKGKEEKESMS 284
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR 553
D ++ VE DL+ YGLIPEF+GR PV+ +L L E+ L+Q P+
Sbjct: 285 D------ILSQVEPEDLVKYGLIPEFIGRLPVVATLAELDEDALIQILSEPK 330
>sp|B2FQR3|CLPX_STRMK ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Stenotrophomonas maltophilia (strain K279a) GN=clpX
PE=3 SV=1
Length = 429
Score = 319 bits (818), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 167/290 (57%), Positives = 211/290 (72%), Gaps = 24/290 (8%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EI + LD++VIGQ RAK+ L+VAVYNHY RI ES QK +D
Sbjct: 66 LPKPREILEVLDQYVIGQNRAKRTLAVAVYNHYKRI--ESRQK---------------ND 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELAKSNILLVGPTGSGKTLLAETLARLLNVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQQGIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DTK+ILFICGGAF ++K I R D SIGFGA V+++ R V
Sbjct: 229 GRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQARSTDVGSIGFGAKVKSSERKQEV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR 553
++ VE DLI +GLIPEFVGR PV+ +L L E L++ P+
Sbjct: 286 ---GKVLAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPK 332
>sp|A3QFX5|CLPX_SHELP ATP-dependent Clp protease ATP-binding subunit ClpX OS=Shewanella
loihica (strain ATCC BAA-1088 / PV-4) GN=clpX PE=3 SV=1
Length = 426
Score = 319 bits (818), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 164/292 (56%), Positives = 208/292 (71%), Gaps = 24/292 (8%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ PTP E+ LD +VIGQE+AKKVLSVAVYNHY R+ N + +
Sbjct: 63 DRLPTPHELRAHLDDYVIGQEKAKKVLSVAVYNHYKRLKNATPK---------------- 106
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
D VEL KSNILL+GPTGSGKTLLA+TLAR++NVPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 -DGVELGKSNILLIGPTGSGKTLLAETLARFLNVPFTMADATTLTEAGYVGEDVENIIQK 165
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP
Sbjct: 166 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPP 225
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQ-DSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT ILFICGGAF +EK I +R + IGFGA V+ G
Sbjct: 226 QGGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRSHVGTGIGFGAEVK------GEA 279
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR 553
D S ++ VE DL+ YGLIPEF+GR PVL +L L E L+Q P+
Sbjct: 280 DKATISDVLLQVEPEDLVKYGLIPEFIGRLPVLATLAELDEAALIQILSEPK 331
>sp|B4SLN2|CLPX_STRM5 ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Stenotrophomonas maltophilia (strain R551-3) GN=clpX
PE=3 SV=1
Length = 429
Score = 319 bits (817), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 167/290 (57%), Positives = 210/290 (72%), Gaps = 24/290 (8%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EI + LD++VIGQ RAK+ L+VAVYNHY RI ES QK +D
Sbjct: 66 LPKPREILEVLDQYVIGQNRAKRTLAVAVYNHYKRI--ESRQK---------------ND 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 EVELAKSNILLVGPTGSGKTLLAETLARLLNVPFTMADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQQGIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQD-SSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DTK+ILFICGGAF ++K I R D SIGFGA V++ R V
Sbjct: 229 GRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQARSTDVGSIGFGAKVKSAERKQEV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR 553
++ VE DLI +GLIPEFVGR PV+ +L L E L++ P+
Sbjct: 286 ---GKVLAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPK 332
>sp|A5WC69|CLPX_PSYWF ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Psychrobacter sp. (strain PRwf-1) GN=clpX PE=3 SV=1
Length = 425
Score = 319 bits (817), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 166/306 (54%), Positives = 210/306 (68%), Gaps = 17/306 (5%)
Query: 251 SKDG---CWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQK 307
S+DG W L K PTPKEI + LD +VIGQE AKK LSVAVYNHY R+ +
Sbjct: 52 SEDGEVNTW----LTKKLPTPKEIREHLDGYVIGQETAKKALSVAVYNHYKRLKVAAK-- 105
Query: 308 RSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLT 367
E G DD VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT
Sbjct: 106 --LAEDKKQAKLGADDAMVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFAMADATTLT 163
Query: 368 QAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQ 427
+AGYVGEDVE+I+ KLL +DY+V A+QGI+Y+DE+DKI+KK E+++I+RDVSGEGVQQ
Sbjct: 164 EAGYVGEDVENIVQKLLQAADYDVEKAEQGIIYVDEIDKISKKGENMSITRDVSGEGVQQ 223
Query: 428 ALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGF 487
ALLK++EGTV +P G RKHP + IQ+DT +IL I GGAF ++K I +R + + IGF
Sbjct: 224 ALLKLIEGTVAAIPPHGGRKHPNQELIQVDTSNILIIVGGAFSGLDKVIQQRTEKTGIGF 283
Query: 488 GAPVRANMRAGGVTDAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQ 547
A V++ D S L + VE DLI +GLIPE +GR PV+ +L L E L+Q
Sbjct: 284 NAEVKSK------DDGKQLSELFKQVEPEDLIKFGLIPELIGRLPVIATLEELDEEALMQ 337
Query: 548 KCHFPR 553
P+
Sbjct: 338 ILTEPK 343
>sp|A1K782|CLPX_AZOSB ATP-dependent Clp protease ATP-binding subunit ClpX OS=Azoarcus sp.
(strain BH72) GN=clpX PE=3 SV=1
Length = 422
Score = 318 bits (816), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 173/327 (52%), Positives = 224/327 (68%), Gaps = 37/327 (11%)
Query: 248 GSGSKDGCWGGSNLGNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQK 307
GS +G G K PTP EIC+ LD++VIGQ +AK+ LSVAVYNHY R+ + S ++
Sbjct: 53 GSVETEGVKG------KLPTPHEICQILDQYVIGQAQAKRNLSVAVYNHYKRLRHLSGRQ 106
Query: 308 RSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLT 367
D VEL KSNILL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT
Sbjct: 107 ----------------DEVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVMADATTLT 150
Query: 368 QAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQ 427
+AGYVGEDVE+I+ KLL DY+V AQQGIVYIDE+DKI++K+++ +I+RDVSGEGVQQ
Sbjct: 151 EAGYVGEDVENIIQKLLQKCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQ 210
Query: 428 ALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGF 487
ALLK++EGT+ ++P +G RKHP D IQ+DT ++LFICGGAF ++K I R + IGF
Sbjct: 211 ALLKLIEGTIASIPPQGGRKHPNQDFIQVDTTNVLFICGGAFDGLDKVIRNRTEKMGIGF 270
Query: 488 GAPVRANMRAGGVTDAVVTSSLMET---VESSDLIAYGLIPEFVGRFPVLVSLLALTENQ 544
GA V++ R G +L ET VE DL+ +GLIPEFVGR PV+ +L L E+
Sbjct: 271 GAEVKS--RQG--------KNLTETFRQVEPEDLVKFGLIPEFVGRLPVVATLQELDEDA 320
Query: 545 LVQKCHFPR--FYKLPMSLSNLTGTDI 569
L+Q P+ K L ++ G D+
Sbjct: 321 LIQILIEPKNALVKQYQKLFSMEGVDL 347
>sp|A1U1Q2|CLPX_MARAV ATP-dependent Clp protease ATP-binding subunit ClpX OS=Marinobacter
aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=clpX
PE=3 SV=1
Length = 427
Score = 318 bits (815), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 212/291 (72%), Gaps = 23/291 (7%)
Query: 263 NKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVD 322
++ PTP EI + L+++VIGQ+RAK VLSVAVYNHY R+ GE S
Sbjct: 65 DRLPTPAEIRETLNEYVIGQDRAKVVLSVAVYNHYKRL--------RYGEGKS------- 109
Query: 323 DDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYK 382
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 110 --DVELGKSNILLIGPTGSGKTLLAETLARMLNVPFTIADATTLTEAGYVGEDVENIIQK 167
Query: 383 LLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPE 442
LL DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 168 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 227
Query: 443 KGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTD 502
+G RKHP+ + +Q+DT +ILFICGGAF ++K I ER + SSIGF A V++ D
Sbjct: 228 QGGRKHPQQEFLQVDTGNILFICGGAFAGLDKVIQERSERSSIGFSATVKSQ------DD 281
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR 553
+ T ++ VE+ DL+ +GLIPEFVGR PV+ +L L E LVQ P+
Sbjct: 282 SKSTGDIIREVETEDLVKFGLIPEFVGRLPVVATLTELDEEALVQILTEPK 332
>sp|Q0AJI3|CLPX_NITEC ATP-dependent Clp protease ATP-binding subunit ClpX OS=Nitrosomonas
eutropha (strain C91) GN=clpX PE=3 SV=1
Length = 427
Score = 318 bits (815), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 166/289 (57%), Positives = 209/289 (72%), Gaps = 19/289 (6%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EIC+ LD++VIGQE AKK+LSVAVYNHY R+ N S K +AG D
Sbjct: 63 LPTPHEICETLDQYVIGQESAKKILSVAVYNHYKRLRNLS--KVNAG-----------SD 109
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR ++VPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DIELAKSNILLIGPTGSGKTLLAQTLARLLDVPFVIADATTLTEAGYVGEDVENIIQKLL 169
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
S+++V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT VP +G
Sbjct: 170 QASNHDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTAALVPPQG 229
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVTDAV 504
RKHP + IQ+DT +ILFICGGAF I+K I R + S IGFGA V D
Sbjct: 230 GRKHPNQEFIQVDTTNILFICGGAFDGIDKIIRARSEKSGIGFGADVINQ------NDRK 283
Query: 505 VTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR 553
+ ++ +E DLI YGLIPEF+GR PV+ +L L E L+Q P+
Sbjct: 284 ELNKILGDIEPEDLIKYGLIPEFIGRLPVVATLRELNEAALIQILIEPK 332
>sp|Q5H433|CLPX_XANOR ATP-dependent Clp protease ATP-binding subunit ClpX OS=Xanthomonas
oryzae pv. oryzae (strain KACC10331 / KXO85) GN=clpX
PE=3 SV=1
Length = 428
Score = 318 bits (815), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 164/290 (56%), Positives = 210/290 (72%), Gaps = 24/290 (8%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EI + LD++VIGQ RAK+ L+VAVYNHY RI + S +D
Sbjct: 66 LPKPREILEVLDQYVIGQLRAKRTLAVAVYNHYKRIESRSK-----------------ND 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQQGIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDS-SIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DTK+ILFICGGAF ++K I +R D+ IGFGA V+++ R V
Sbjct: 229 GRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSSERKQEV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR 553
++ VE DLI +GLIPEFVGR PV+ +L L E L++ P+
Sbjct: 286 ---GKILAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPK 332
>sp|Q2P6Y9|CLPX_XANOM ATP-dependent Clp protease ATP-binding subunit ClpX OS=Xanthomonas
oryzae pv. oryzae (strain MAFF 311018) GN=clpX PE=3 SV=1
Length = 428
Score = 318 bits (815), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 164/290 (56%), Positives = 210/290 (72%), Gaps = 24/290 (8%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EI + LD++VIGQ RAK+ L+VAVYNHY RI + S +D
Sbjct: 66 LPKPREILEVLDQYVIGQLRAKRTLAVAVYNHYKRIESRSK-----------------ND 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQQGIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDS-SIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DTK+ILFICGGAF ++K I +R D+ IGFGA V+++ R V
Sbjct: 229 GRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSSERKQEV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR 553
++ VE DLI +GLIPEFVGR PV+ +L L E L++ P+
Sbjct: 286 ---GKILAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPK 332
>sp|Q2NV78|CLPX_SODGM ATP-dependent Clp protease ATP-binding subunit ClpX OS=Sodalis
glossinidius (strain morsitans) GN=clpX PE=3 SV=1
Length = 424
Score = 318 bits (815), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 165/308 (53%), Positives = 217/308 (70%), Gaps = 26/308 (8%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTP EI LD +VIGQE+AKKVL+VAVYNHY R+ N G ++
Sbjct: 64 LPTPHEIRHHLDDYVIGQEKAKKVLAVAVYNHYKRLRN-----------------GDTNN 106
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
+EL KSNILL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GIELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 226
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQ-DSSIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DT ILFICGGAF ++K I +R + + IGF A V+ G ++
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRTETNRGIGFSATVK------GSSEK 280
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR--FYKLPMSL 561
V L+ VE DLI +GLIPEF+GR PV+ +L L+E L+Q H P+ K +L
Sbjct: 281 VTKGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILHEPKNALTKQYQAL 340
Query: 562 SNLTGTDI 569
NL G ++
Sbjct: 341 FNLEGVEL 348
>sp|Q9I2U0|CLPX_PSEAE ATP-dependent Clp protease ATP-binding subunit ClpX OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=clpX PE=3 SV=1
Length = 426
Score = 318 bits (815), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 168/310 (54%), Positives = 215/310 (69%), Gaps = 25/310 (8%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
G+K P PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 GHKLPAPKEIRTILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D +EL KSNIL++GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 --DDIELGKSNILMIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 164
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 224
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +E+ I R IGF A VR+ V
Sbjct: 225 PQGGRKHPQQEFLQVDTRNILFICGGAFAGLERVIQNRSARGGIGFNAEVRSQEMGKKVG 284
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR--FYKLPM 559
+A + VE DL+ +GLIPEFVGR PV+ +L L E L+Q P+ K
Sbjct: 285 EA------FKEVEPEDLVKFGLIPEFVGRLPVIATLDELDEAALMQILTEPKNALTKQYA 338
Query: 560 SLSNLTGTDI 569
L + G D+
Sbjct: 339 KLFEMEGVDL 348
>sp|Q02KU5|CLPX_PSEAB ATP-dependent Clp protease ATP-binding subunit ClpX OS=Pseudomonas
aeruginosa (strain UCBPP-PA14) GN=clpX PE=3 SV=1
Length = 426
Score = 318 bits (815), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 168/310 (54%), Positives = 215/310 (69%), Gaps = 25/310 (8%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
G+K P PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 GHKLPAPKEIRTILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D +EL KSNIL++GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 --DDIELGKSNILMIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 164
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 224
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +E+ I R IGF A VR+ V
Sbjct: 225 PQGGRKHPQQEFLQVDTRNILFICGGAFAGLERVIQNRSARGGIGFNAEVRSQEMGKKVG 284
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR--FYKLPM 559
+A + VE DL+ +GLIPEFVGR PV+ +L L E L+Q P+ K
Sbjct: 285 EA------FKEVEPEDLVKFGLIPEFVGRLPVIATLDELDEAALMQILTEPKNALTKQYA 338
Query: 560 SLSNLTGTDI 569
L + G D+
Sbjct: 339 KLFEMEGVDL 348
>sp|B7VB75|CLPX_PSEA8 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Pseudomonas
aeruginosa (strain LESB58) GN=clpX PE=3 SV=1
Length = 426
Score = 318 bits (815), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 168/310 (54%), Positives = 215/310 (69%), Gaps = 25/310 (8%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
G+K P PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 GHKLPAPKEIRTILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D +EL KSNIL++GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 --DDIELGKSNILMIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 164
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 224
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +E+ I R IGF A VR+ V
Sbjct: 225 PQGGRKHPQQEFLQVDTRNILFICGGAFAGLERVIQNRSARGGIGFNAEVRSQEMGKKVG 284
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR--FYKLPM 559
+A + VE DL+ +GLIPEFVGR PV+ +L L E L+Q P+ K
Sbjct: 285 EA------FKEVEPEDLVKFGLIPEFVGRLPVIATLDELDEAALMQILTEPKNALTKQYA 338
Query: 560 SLSNLTGTDI 569
L + G D+
Sbjct: 339 KLFEMEGVDL 348
>sp|A6V718|CLPX_PSEA7 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Pseudomonas
aeruginosa (strain PA7) GN=clpX PE=3 SV=1
Length = 426
Score = 318 bits (815), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 168/310 (54%), Positives = 215/310 (69%), Gaps = 25/310 (8%)
Query: 262 GNKFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGV 321
G+K P PKEI LD++VIGQERAKKVL+VAVYNHY R+ N+ +K
Sbjct: 62 GHKLPAPKEIRTILDQYVIGQERAKKVLAVAVYNHYKRL-NQRDKK-------------- 106
Query: 322 DDDTVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILY 381
D +EL KSNIL++GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 107 --DDIELGKSNILMIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 164
Query: 382 KLLTVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVP 441
KLL DY+V AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP
Sbjct: 165 KLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 224
Query: 442 EKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRANMRAGGVT 501
+G RKHP+ + +Q+DT++ILFICGGAF +E+ I R IGF A VR+ V
Sbjct: 225 PQGGRKHPQQEFLQVDTRNILFICGGAFAGLERVIQNRSARGGIGFNAEVRSQEMGKKVG 284
Query: 502 DAVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR--FYKLPM 559
+A + VE DL+ +GLIPEFVGR PV+ +L L E L+Q P+ K
Sbjct: 285 EA------FKEVEPEDLVKFGLIPEFVGRLPVIATLDELDEAALMQILTEPKNALTKQYA 338
Query: 560 SLSNLTGTDI 569
L + G D+
Sbjct: 339 KLFEMEGVDL 348
>sp|Q3BWQ0|CLPX_XANC5 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Xanthomonas
campestris pv. vesicatoria (strain 85-10) GN=clpX PE=3
SV=1
Length = 428
Score = 318 bits (814), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 164/290 (56%), Positives = 210/290 (72%), Gaps = 24/290 (8%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EI + LD++VIGQ RAK+ L+VAVYNHY RI + S +D
Sbjct: 66 LPKPREILEVLDQYVIGQLRAKRTLAVAVYNHYKRIESRSK-----------------ND 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQQGIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDS-SIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DTK+ILFICGGAF ++K I +R D+ IGFGA V+++ R V
Sbjct: 229 GRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSSERKQEV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR 553
++ VE DLI +GLIPEFVGR PV+ +L L E L++ P+
Sbjct: 286 ---GKILAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPK 332
>sp|Q8PNI4|CLPX_XANAC ATP-dependent Clp protease ATP-binding subunit ClpX OS=Xanthomonas
axonopodis pv. citri (strain 306) GN=clpX PE=3 SV=1
Length = 428
Score = 318 bits (814), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 164/290 (56%), Positives = 210/290 (72%), Gaps = 24/290 (8%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
P P+EI + LD++VIGQ RAK+ L+VAVYNHY RI + S +D
Sbjct: 66 LPKPREILEVLDQYVIGQLRAKRTLAVAVYNHYKRIESRSK-----------------ND 108
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLL 168
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
DY+V AQQGIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 169 QKCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDS-SIGFGAPVRANMRAGGVTDA 503
RKHP+ + +Q+DTK+ILFICGGAF ++K I +R D+ IGFGA V+++ R V
Sbjct: 229 GRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSSERKQEV--- 285
Query: 504 VVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR 553
++ VE DLI +GLIPEFVGR PV+ +L L E L++ P+
Sbjct: 286 ---GKILAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPK 332
>sp|B3Q7P4|CLPX_RHOPT ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Rhodopseudomonas palustris (strain TIE-1) GN=clpX
PE=3 SV=1
Length = 424
Score = 318 bits (814), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 209/291 (71%), Gaps = 28/291 (9%)
Query: 265 FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDD 324
PTPKEICK LD +VIGQ AKKVLSVAV+NHY R+ +++ +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQTKH-----------------N 105
Query: 325 TVELEKSNILLMGPTGSGKTLLAKTLARYVNVPFVIADATTLTQAGYVGEDVESILYKLL 384
VEL KSNILL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLL 165
Query: 385 TVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKG 444
+DYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G
Sbjct: 166 QAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQG 225
Query: 445 ARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRQDSSIGFGAPVRA--NMRAGGVTD 502
RKHP+ + +Q+DT +ILFICGGAF +EK IS R + +SIGF A V A + R G
Sbjct: 226 GRKHPQQEFLQVDTTNILFICGGAFAGLEKIISSRGRTTSIGFAAQVLAPEDRRTG---- 281
Query: 503 AVVTSSLMETVESSDLIAYGLIPEFVGRFPVLVSLLALTENQLVQKCHFPR 553
+ VE DL+ YGLIPEFVGR PV+ +L L EN L + P+
Sbjct: 282 -----EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTDPK 327
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 209,448,648
Number of Sequences: 539616
Number of extensions: 9363781
Number of successful extensions: 54369
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1661
Number of HSP's successfully gapped in prelim test: 802
Number of HSP's that attempted gapping in prelim test: 48320
Number of HSP's gapped (non-prelim): 4390
length of query: 570
length of database: 191,569,459
effective HSP length: 123
effective length of query: 447
effective length of database: 125,196,691
effective search space: 55962920877
effective search space used: 55962920877
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)