Query 008331
Match_columns 570
No_of_seqs 215 out of 1524
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 23:41:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008331.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008331hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fim_B ARYL-alcohol oxidase; A 100.0 3.7E-80 1.3E-84 666.5 32.9 499 41-565 2-566 (566)
2 1ju2_A HydroxynitrIle lyase; f 100.0 1.1E-78 3.7E-83 656.0 33.9 505 25-567 10-519 (536)
3 3qvp_A Glucose oxidase; oxidor 100.0 1.4E-78 4.9E-83 654.8 33.2 489 39-564 17-578 (583)
4 3q9t_A Choline dehydrogenase a 100.0 3.8E-76 1.3E-80 636.7 30.5 492 39-565 4-573 (577)
5 1gpe_A Protein (glucose oxidas 100.0 1.2E-73 4.2E-78 622.1 28.6 494 39-564 22-582 (587)
6 3t37_A Probable dehydrogenase; 100.0 3.4E-72 1.2E-76 608.2 34.1 470 39-562 15-521 (526)
7 2jbv_A Choline oxidase; alcoho 100.0 2.9E-71 9.8E-76 599.5 35.3 477 40-565 12-530 (546)
8 1kdg_A CDH, cellobiose dehydro 100.0 8.1E-62 2.8E-66 528.0 27.6 484 38-564 4-542 (546)
9 1n4w_A CHOD, cholesterol oxida 100.0 8.6E-60 2.9E-64 505.9 26.2 443 39-569 3-504 (504)
10 1coy_A Cholesterol oxidase; ox 100.0 1.1E-58 3.7E-63 497.5 26.1 437 35-566 5-506 (507)
11 3pl8_A Pyranose 2-oxidase; sub 100.0 1.3E-47 4.5E-52 419.3 29.5 471 39-565 44-613 (623)
12 4at0_A 3-ketosteroid-delta4-5a 99.6 8.6E-15 2.9E-19 157.0 17.9 193 39-284 39-272 (510)
13 1qo8_A Flavocytochrome C3 fuma 99.5 9.8E-14 3.4E-18 150.6 15.0 190 39-283 119-318 (566)
14 1y0p_A Fumarate reductase flav 99.5 2E-13 7E-18 148.3 16.7 186 40-280 125-320 (571)
15 1d4d_A Flavocytochrome C fumar 99.4 2.8E-12 9.6E-17 139.2 15.9 190 40-284 125-325 (572)
16 2h88_A Succinate dehydrogenase 99.3 1E-11 3.5E-16 135.1 16.4 57 212-278 161-218 (621)
17 2bs2_A Quinol-fumarate reducta 99.3 8.7E-12 3E-16 136.6 15.3 57 212-278 164-221 (660)
18 2wdq_A Succinate dehydrogenase 99.3 1.1E-11 3.9E-16 134.5 14.8 58 212-278 149-207 (588)
19 3dme_A Conserved exported prot 99.3 1.1E-11 3.8E-16 126.7 10.1 63 212-287 156-219 (369)
20 1chu_A Protein (L-aspartate ox 99.3 2.2E-11 7.5E-16 131.0 12.7 61 213-278 145-209 (540)
21 1kf6_A Fumarate reductase flav 99.2 1.8E-10 6.2E-15 125.3 17.4 58 212-279 140-199 (602)
22 3da1_A Glycerol-3-phosphate de 99.2 3.4E-11 1.2E-15 130.1 11.4 66 212-288 176-242 (561)
23 2i0z_A NAD(FAD)-utilizing dehy 99.2 1.1E-10 3.8E-15 122.8 11.7 54 212-279 140-193 (447)
24 2rgh_A Alpha-glycerophosphate 99.1 5.1E-10 1.8E-14 121.2 16.2 65 212-287 194-259 (571)
25 3nyc_A D-arginine dehydrogenas 99.1 1.8E-10 6.2E-15 118.3 11.8 36 39-74 7-42 (381)
26 1jnr_A Adenylylsulfate reducta 99.1 2.5E-10 8.7E-15 125.3 13.1 59 213-278 158-219 (643)
27 3gyx_A Adenylylsulfate reducta 99.1 1.1E-10 3.7E-15 127.9 9.1 60 212-278 172-234 (662)
28 1y56_B Sarcosine oxidase; dehy 99.1 1.6E-10 5.6E-15 118.8 9.8 60 212-287 155-214 (382)
29 3dje_A Fructosyl amine: oxygen 99.1 8.6E-11 2.9E-15 123.4 6.1 37 39-75 4-42 (438)
30 2oln_A NIKD protein; flavoprot 99.0 1.5E-09 5.3E-14 112.2 13.8 35 40-74 3-38 (397)
31 3v76_A Flavoprotein; structura 99.0 2E-10 6.9E-15 119.3 7.0 36 39-74 25-61 (417)
32 2gag_B Heterotetrameric sarcos 99.0 1.4E-09 4.9E-14 112.6 12.8 60 212-287 180-239 (405)
33 2qcu_A Aerobic glycerol-3-phos 99.0 3E-09 1E-13 113.5 15.5 60 212-283 155-215 (501)
34 2e5v_A L-aspartate oxidase; ar 99.0 9.5E-10 3.3E-14 116.3 11.3 52 212-277 125-176 (472)
35 1pj5_A N,N-dimethylglycine oxi 99.0 1.4E-09 4.9E-14 123.2 13.0 60 212-287 157-216 (830)
36 1ryi_A Glycine oxidase; flavop 99.0 3.4E-10 1.2E-14 116.4 7.0 39 36-74 12-51 (382)
37 3ps9_A TRNA 5-methylaminomethy 99.0 1.8E-09 6.3E-14 119.5 12.9 35 40-74 271-306 (676)
38 3pvc_A TRNA 5-methylaminomethy 99.0 1.6E-09 5.4E-14 120.3 11.3 35 40-74 263-298 (689)
39 2gf3_A MSOX, monomeric sarcosi 98.9 5.5E-09 1.9E-13 107.6 12.8 34 41-74 3-37 (389)
40 3cgv_A Geranylgeranyl reductas 98.9 6.5E-09 2.2E-13 107.3 13.2 63 212-287 108-170 (397)
41 2uzz_A N-methyl-L-tryptophan o 98.9 2E-09 6.7E-14 110.2 7.4 35 41-75 2-37 (372)
42 3axb_A Putative oxidoreductase 98.9 4.8E-09 1.6E-13 110.3 10.4 33 40-72 22-56 (448)
43 2gqf_A Hypothetical protein HI 98.8 4.8E-09 1.6E-13 108.5 8.9 34 41-74 4-38 (401)
44 3e1t_A Halogenase; flavoprotei 98.8 1.2E-08 4.1E-13 109.2 11.8 55 212-276 117-171 (512)
45 3ka7_A Oxidoreductase; structu 98.8 1.6E-08 5.5E-13 105.4 12.2 57 212-283 202-258 (425)
46 3oz2_A Digeranylgeranylglycero 98.8 1.3E-08 4.5E-13 104.6 11.0 55 212-278 108-162 (397)
47 3nlc_A Uncharacterized protein 98.8 1.1E-08 3.9E-13 109.2 10.4 36 39-74 105-141 (549)
48 4dgk_A Phytoene dehydrogenase; 98.8 3E-09 1E-13 113.6 5.9 59 211-283 226-284 (501)
49 1rp0_A ARA6, thiazole biosynth 98.8 6.1E-08 2.1E-12 95.3 14.9 36 40-75 38-75 (284)
50 3p1w_A Rabgdi protein; GDI RAB 98.7 2.6E-08 8.9E-13 104.2 10.2 40 38-77 17-57 (475)
51 3nix_A Flavoprotein/dehydrogen 98.7 4.8E-08 1.6E-12 101.7 12.0 35 40-74 4-39 (421)
52 3jsk_A Cypbp37 protein; octame 98.7 9.9E-08 3.4E-12 95.2 13.3 35 40-74 78-115 (344)
53 3atr_A Conserved archaeal prot 98.7 9.4E-08 3.2E-12 100.6 13.4 55 212-276 106-161 (453)
54 3nrn_A Uncharacterized protein 98.7 7.4E-08 2.5E-12 100.3 11.7 35 43-77 2-37 (421)
55 3i3l_A Alkylhalidase CMLS; fla 98.7 6.1E-08 2.1E-12 105.0 10.9 53 212-275 134-186 (591)
56 2gmh_A Electron transfer flavo 98.6 2E-07 6.8E-12 101.1 11.3 58 212-278 150-218 (584)
57 2gjc_A Thiazole biosynthetic e 98.5 4.8E-07 1.7E-11 89.7 12.4 35 40-74 64-101 (326)
58 3c4n_A Uncharacterized protein 98.5 4.1E-08 1.4E-12 101.8 4.5 35 40-74 35-72 (405)
59 3ihg_A RDME; flavoenzyme, anth 98.5 5.4E-07 1.8E-11 96.9 13.4 35 40-74 4-39 (535)
60 2zxi_A TRNA uridine 5-carboxym 98.5 3E-07 1E-11 98.8 11.2 34 40-73 26-60 (637)
61 3f8d_A Thioredoxin reductase ( 98.5 2.9E-06 1E-10 84.3 17.8 61 216-287 200-261 (323)
62 3qj4_A Renalase; FAD/NAD(P)-bi 98.5 3.1E-07 1E-11 92.8 10.2 33 42-74 2-38 (342)
63 3ces_A MNMG, tRNA uridine 5-ca 98.5 4E-07 1.4E-11 98.1 10.7 35 39-73 26-61 (651)
64 2qa1_A PGAE, polyketide oxygen 98.5 8.2E-07 2.8E-11 94.4 12.6 38 37-74 7-45 (500)
65 1yvv_A Amine oxidase, flavin-c 98.5 2E-07 6.7E-12 93.8 7.3 34 41-74 2-36 (336)
66 3fmw_A Oxygenase; mithramycin, 98.4 4.4E-07 1.5E-11 98.0 9.6 36 39-74 47-83 (570)
67 3cty_A Thioredoxin reductase; 98.4 1.2E-06 4.1E-11 87.4 11.3 64 214-287 198-262 (319)
68 2qa2_A CABE, polyketide oxygen 98.4 1.3E-06 4.6E-11 92.8 11.9 37 38-74 9-46 (499)
69 3lxd_A FAD-dependent pyridine 98.4 1E-06 3.4E-11 91.5 10.7 62 213-288 201-262 (415)
70 3itj_A Thioredoxin reductase 1 98.4 2.1E-06 7.1E-11 86.1 12.3 55 217-281 220-275 (338)
71 4a9w_A Monooxygenase; baeyer-v 98.4 4.1E-07 1.4E-11 91.9 6.9 34 41-74 3-37 (357)
72 3rp8_A Flavoprotein monooxygen 98.3 1.4E-06 4.9E-11 90.1 10.8 38 37-74 19-57 (407)
73 3cp8_A TRNA uridine 5-carboxym 98.3 8.4E-07 2.9E-11 95.6 9.2 35 39-73 19-54 (641)
74 2bry_A NEDD9 interacting prote 98.3 3.5E-07 1.2E-11 97.3 5.8 36 39-74 90-126 (497)
75 2x3n_A Probable FAD-dependent 98.3 1.8E-06 6.2E-11 89.0 10.2 35 40-74 5-40 (399)
76 3kkj_A Amine oxidase, flavin-c 98.3 2.7E-07 9.3E-12 89.1 3.7 35 41-75 2-37 (336)
77 3fg2_P Putative rubredoxin red 98.3 5.3E-06 1.8E-10 85.7 13.3 62 213-288 191-252 (404)
78 2vou_A 2,6-dihydroxypyridine h 98.2 8E-06 2.7E-10 84.1 13.5 35 40-74 4-39 (397)
79 4ap3_A Steroid monooxygenase; 98.2 2.3E-06 7.8E-11 91.9 9.1 36 39-74 19-55 (549)
80 3gwf_A Cyclohexanone monooxyge 98.2 1.7E-06 5.7E-11 92.9 7.9 35 40-74 7-43 (540)
81 1k0i_A P-hydroxybenzoate hydro 98.2 3.1E-06 1.1E-10 87.0 9.7 33 41-73 2-35 (394)
82 2r0c_A REBC; flavin adenine di 98.2 6.9E-06 2.4E-10 88.4 12.2 36 39-74 24-60 (549)
83 1w4x_A Phenylacetone monooxyge 98.2 3.5E-06 1.2E-10 90.6 9.3 37 39-75 14-51 (542)
84 3s5w_A L-ornithine 5-monooxyge 98.2 7.4E-06 2.5E-10 86.2 11.3 36 40-75 29-70 (463)
85 3r9u_A Thioredoxin reductase; 98.1 2.5E-06 8.5E-11 84.6 7.0 56 216-281 193-248 (315)
86 3lzw_A Ferredoxin--NADP reduct 98.1 3.2E-06 1.1E-10 84.4 7.3 34 40-73 6-40 (332)
87 2zbw_A Thioredoxin reductase; 98.1 5.6E-06 1.9E-10 83.0 9.1 34 40-73 4-38 (335)
88 2gv8_A Monooxygenase; FMO, FAD 98.1 5.1E-06 1.8E-10 87.1 8.9 37 40-76 5-44 (447)
89 3uox_A Otemo; baeyer-villiger 98.1 4.6E-06 1.6E-10 89.5 8.0 36 39-74 7-43 (545)
90 1q1r_A Putidaredoxin reductase 98.0 1.9E-05 6.5E-10 82.3 11.4 61 213-287 198-260 (431)
91 2xve_A Flavin-containing monoo 98.0 1.6E-05 5.4E-10 83.7 10.7 34 42-75 3-43 (464)
92 4fk1_A Putative thioredoxin re 98.0 1.9E-06 6.5E-11 85.4 3.1 35 39-73 4-39 (304)
93 3fpz_A Thiazole biosynthetic e 98.0 2.7E-06 9.2E-11 85.2 3.6 37 40-76 64-103 (326)
94 4gcm_A TRXR, thioredoxin reduc 98.0 2.6E-06 8.8E-11 84.7 3.3 34 40-73 5-39 (312)
95 4a5l_A Thioredoxin reductase; 97.9 2.8E-06 9.6E-11 84.3 2.9 35 39-73 2-37 (314)
96 2bcg_G Secretory pathway GDP d 97.9 4.4E-06 1.5E-10 87.7 4.2 40 39-78 9-49 (453)
97 4gde_A UDP-galactopyranose mut 97.9 3.6E-06 1.2E-10 89.7 3.3 39 39-77 8-48 (513)
98 2pyx_A Tryptophan halogenase; 97.9 1.2E-05 4.3E-10 86.0 6.5 35 40-74 6-53 (526)
99 3iwa_A FAD-dependent pyridine 97.8 0.00025 8.6E-09 74.7 15.7 61 212-287 208-268 (472)
100 4b63_A L-ornithine N5 monooxyg 97.8 1.5E-05 5.1E-10 84.7 5.6 39 36-74 34-73 (501)
101 3k7m_X 6-hydroxy-L-nicotine ox 97.8 7.9E-06 2.7E-10 85.1 3.2 36 42-77 2-38 (431)
102 3ef6_A Toluene 1,2-dioxygenase 97.8 0.00017 5.7E-09 74.5 13.1 59 214-287 193-251 (410)
103 1c0p_A D-amino acid oxidase; a 97.8 1.1E-05 3.7E-10 81.9 3.9 36 39-74 4-40 (363)
104 2cul_A Glucose-inhibited divis 97.7 1.6E-05 5.6E-10 75.2 3.5 33 41-73 3-36 (232)
105 2xdo_A TETX2 protein; tetracyc 97.7 1.9E-05 6.6E-10 81.2 4.1 39 36-74 21-60 (398)
106 3qfa_A Thioredoxin reductase 1 97.6 2E-05 7E-10 84.1 3.8 46 28-73 19-65 (519)
107 3hdq_A UDP-galactopyranose mut 97.6 2.3E-05 7.8E-10 80.2 3.9 40 38-77 26-66 (397)
108 2ivd_A PPO, PPOX, protoporphyr 97.6 2.1E-05 7.3E-10 83.0 3.6 42 36-77 11-53 (478)
109 3lad_A Dihydrolipoamide dehydr 97.6 2.2E-05 7.6E-10 82.9 3.6 35 40-74 2-37 (476)
110 1i8t_A UDP-galactopyranose mut 97.6 2.4E-05 8.4E-10 79.6 3.7 37 41-77 1-38 (367)
111 2b9w_A Putative aminooxidase; 97.6 3.2E-05 1.1E-09 80.2 4.5 39 39-77 4-44 (424)
112 3g3e_A D-amino-acid oxidase; F 97.6 2.6E-05 8.9E-10 78.7 3.6 31 43-73 2-39 (351)
113 1v0j_A UDP-galactopyranose mut 97.6 3E-05 1E-09 79.9 4.0 39 39-77 5-45 (399)
114 1s3e_A Amine oxidase [flavin-c 97.6 2.9E-05 9.8E-10 83.0 3.6 38 40-77 3-41 (520)
115 2jae_A L-amino acid oxidase; o 97.6 4.1E-05 1.4E-09 81.1 4.6 39 39-77 9-48 (489)
116 1d5t_A Guanine nucleotide diss 97.6 4.2E-05 1.4E-09 79.7 4.5 40 39-78 4-44 (433)
117 3i6d_A Protoporphyrinogen oxid 97.5 2.8E-05 9.7E-10 81.7 3.0 37 41-77 5-48 (470)
118 3c96_A Flavin-containing monoo 97.5 3.5E-05 1.2E-09 79.7 3.6 35 40-74 3-39 (410)
119 3o0h_A Glutathione reductase; 97.5 3.5E-05 1.2E-09 81.6 3.5 33 40-72 25-58 (484)
120 2e1m_A L-glutamate oxidase; L- 97.5 4.8E-05 1.6E-09 77.2 4.1 38 39-76 42-81 (376)
121 1rsg_A FMS1 protein; FAD bindi 97.5 3.2E-05 1.1E-09 82.6 3.0 38 40-77 7-46 (516)
122 3urh_A Dihydrolipoyl dehydroge 97.5 3.5E-05 1.2E-09 81.7 3.1 38 39-76 23-61 (491)
123 3alj_A 2-methyl-3-hydroxypyrid 97.5 4.6E-05 1.6E-09 77.8 3.8 35 41-75 11-46 (379)
124 3l8k_A Dihydrolipoyl dehydroge 97.5 3.7E-05 1.3E-09 80.9 3.2 36 40-75 3-39 (466)
125 2vvm_A Monoamine oxidase N; FA 97.5 3.8E-05 1.3E-09 81.5 3.2 38 40-77 38-76 (495)
126 4b1b_A TRXR, thioredoxin reduc 97.5 4.2E-05 1.4E-09 81.7 3.4 33 41-73 42-75 (542)
127 2yg5_A Putrescine oxidase; oxi 97.5 4.6E-05 1.6E-09 79.8 3.5 38 40-77 4-42 (453)
128 3nks_A Protoporphyrinogen oxid 97.5 5.2E-05 1.8E-09 80.0 3.7 36 42-77 3-41 (477)
129 4dna_A Probable glutathione re 97.5 5.1E-05 1.7E-09 79.8 3.5 33 40-72 4-37 (463)
130 2q7v_A Thioredoxin reductase; 97.5 4.9E-05 1.7E-09 75.7 3.2 34 39-72 6-40 (325)
131 3ab1_A Ferredoxin--NADP reduct 97.4 6.1E-05 2.1E-09 76.2 3.7 37 39-75 12-49 (360)
132 1sez_A Protoporphyrinogen oxid 97.4 6.7E-05 2.3E-09 79.7 4.2 39 39-77 11-50 (504)
133 3dgh_A TRXR-1, thioredoxin red 97.4 5.4E-05 1.8E-09 80.1 3.3 34 39-72 7-41 (483)
134 3fbs_A Oxidoreductase; structu 97.4 5.8E-05 2E-09 73.8 3.3 33 41-73 2-35 (297)
135 3ic9_A Dihydrolipoamide dehydr 97.4 5.4E-05 1.8E-09 80.2 3.1 33 41-73 8-41 (492)
136 3dk9_A Grase, GR, glutathione 97.4 5E-05 1.7E-09 80.2 2.9 35 39-73 18-53 (478)
137 3ihm_A Styrene monooxygenase A 97.4 5E-05 1.7E-09 79.1 2.7 34 40-73 21-55 (430)
138 3dgz_A Thioredoxin reductase 2 97.4 5.5E-05 1.9E-09 80.1 3.0 34 39-72 4-38 (488)
139 2ywl_A Thioredoxin reductase r 97.4 6.6E-05 2.3E-09 67.8 3.1 32 42-73 2-34 (180)
140 3hyw_A Sulfide-quinone reducta 97.4 0.00047 1.6E-08 71.6 9.6 57 215-287 209-265 (430)
141 1dxl_A Dihydrolipoamide dehydr 97.3 0.00011 3.7E-09 77.4 4.3 38 39-76 4-42 (470)
142 2r9z_A Glutathione amide reduc 97.3 8.6E-05 2.9E-09 78.0 3.3 34 40-73 3-37 (463)
143 3k30_A Histamine dehydrogenase 97.3 0.00014 4.8E-09 80.4 5.2 39 38-76 388-427 (690)
144 2qae_A Lipoamide, dihydrolipoy 97.3 9.7E-05 3.3E-09 77.8 3.7 35 41-75 2-37 (468)
145 1mo9_A ORF3; nucleotide bindin 97.3 0.00012 4E-09 78.3 4.3 66 212-287 261-327 (523)
146 1ges_A Glutathione reductase; 97.3 8.6E-05 3E-09 77.7 3.2 34 40-73 3-37 (450)
147 3lov_A Protoporphyrinogen oxid 97.3 9.7E-05 3.3E-09 77.9 3.5 36 41-76 4-42 (475)
148 1ojt_A Surface protein; redox- 97.3 8.7E-05 3E-09 78.4 3.1 37 39-75 4-41 (482)
149 1zk7_A HGII, reductase, mercur 97.3 0.00011 3.9E-09 77.2 3.8 34 40-73 3-37 (467)
150 2iid_A L-amino-acid oxidase; f 97.3 0.00013 4.4E-09 77.4 4.1 39 39-77 31-70 (498)
151 2hqm_A GR, grase, glutathione 97.3 9.8E-05 3.4E-09 78.0 3.1 34 40-73 10-44 (479)
152 2q0l_A TRXR, thioredoxin reduc 97.3 0.0001 3.5E-09 72.8 3.0 31 42-72 2-34 (311)
153 2bi7_A UDP-galactopyranose mut 97.3 0.00014 4.7E-09 74.5 4.0 37 41-77 3-40 (384)
154 2yqu_A 2-oxoglutarate dehydrog 97.3 0.00011 3.7E-09 77.1 3.2 35 41-75 1-36 (455)
155 3g5s_A Methylenetetrahydrofola 97.3 0.00012 4.2E-09 73.5 3.4 34 42-75 2-36 (443)
156 1onf_A GR, grase, glutathione 97.3 0.00012 4.1E-09 77.7 3.5 33 41-73 2-35 (500)
157 3d1c_A Flavin-containing putat 97.3 0.00011 3.9E-09 74.4 3.2 33 41-73 4-38 (369)
158 4dsg_A UDP-galactopyranose mut 97.2 0.00014 4.8E-09 76.8 3.8 39 39-77 7-47 (484)
159 1zmd_A Dihydrolipoyl dehydroge 97.2 0.00011 3.8E-09 77.4 3.0 37 39-75 4-41 (474)
160 1fl2_A Alkyl hydroperoxide red 97.2 0.00012 4.3E-09 72.1 3.2 31 41-71 1-32 (310)
161 1ebd_A E3BD, dihydrolipoamide 97.2 0.00012 4.2E-09 76.7 3.0 33 40-72 2-35 (455)
162 1v59_A Dihydrolipoamide dehydr 97.2 0.00014 4.6E-09 76.8 3.3 36 40-75 4-40 (478)
163 1lvl_A Dihydrolipoamide dehydr 97.2 0.00014 4.9E-09 76.2 3.4 35 39-73 3-38 (458)
164 1vg0_A RAB proteins geranylger 97.2 0.00019 6.4E-09 77.5 4.0 41 39-79 6-47 (650)
165 1trb_A Thioredoxin reductase; 97.2 0.00013 4.3E-09 72.4 2.5 33 40-72 4-37 (320)
166 2a8x_A Dihydrolipoyl dehydroge 97.2 0.00015 5E-09 76.3 2.9 32 41-72 3-35 (464)
167 2a87_A TRXR, TR, thioredoxin r 97.2 0.00013 4.4E-09 73.0 2.4 34 39-72 12-46 (335)
168 2dkh_A 3-hydroxybenzoate hydro 97.1 0.00023 7.9E-09 77.9 4.3 36 39-74 30-67 (639)
169 4hb9_A Similarities with proba 97.1 0.00022 7.6E-09 73.2 3.7 32 43-74 3-35 (412)
170 4gut_A Lysine-specific histone 97.1 0.00026 9E-09 78.7 4.4 39 39-77 334-373 (776)
171 1vdc_A NTR, NADPH dependent th 97.1 0.00015 5E-09 72.4 2.2 32 40-71 7-39 (333)
172 1b37_A Protein (polyamine oxid 97.1 0.00022 7.6E-09 75.0 3.4 38 40-77 3-42 (472)
173 2eq6_A Pyruvate dehydrogenase 97.1 0.0002 6.9E-09 75.2 3.0 33 41-73 6-39 (464)
174 2vdc_G Glutamate synthase [NAD 97.1 0.00034 1.2E-08 73.2 4.6 38 39-76 120-158 (456)
175 2aqj_A Tryptophan halogenase, 97.0 0.00032 1.1E-08 75.1 4.2 35 40-74 4-42 (538)
176 2x8g_A Thioredoxin glutathione 97.0 0.00029 1E-08 76.5 3.3 34 39-72 105-139 (598)
177 3c4a_A Probable tryptophan hyd 97.0 0.00035 1.2E-08 71.2 3.6 33 43-75 2-37 (381)
178 1hyu_A AHPF, alkyl hydroperoxi 96.9 0.0004 1.4E-08 74.0 3.4 34 38-71 209-243 (521)
179 1o94_A Tmadh, trimethylamine d 96.9 0.00064 2.2E-08 75.5 5.0 38 39-76 387-425 (729)
180 2weu_A Tryptophan 5-halogenase 96.9 0.00033 1.1E-08 74.6 2.4 34 41-74 2-39 (511)
181 2e4g_A Tryptophan halogenase; 96.9 0.00057 2E-08 73.4 4.2 35 40-74 24-62 (550)
182 1fec_A Trypanothione reductase 96.8 0.00051 1.7E-08 72.7 3.6 31 40-70 2-34 (490)
183 2v3a_A Rubredoxin reductase; a 96.8 0.00054 1.8E-08 70.0 3.7 61 212-287 193-253 (384)
184 1ps9_A 2,4-dienoyl-COA reducta 96.8 0.0007 2.4E-08 74.6 4.7 38 39-76 371-409 (671)
185 1pn0_A Phenol 2-monooxygenase; 96.8 0.00049 1.7E-08 75.5 3.0 35 40-74 7-47 (665)
186 2z3y_A Lysine-specific histone 96.8 0.0007 2.4E-08 74.3 4.2 40 38-77 104-144 (662)
187 1xhc_A NADH oxidase /nitrite r 96.8 0.00062 2.1E-08 69.1 3.5 34 41-75 8-42 (367)
188 2wpf_A Trypanothione reductase 96.8 0.00053 1.8E-08 72.6 3.1 33 39-71 5-39 (495)
189 2bc0_A NADH oxidase; flavoprot 96.7 0.00057 2E-08 72.3 3.1 35 41-75 35-73 (490)
190 1xdi_A RV3303C-LPDA; reductase 96.7 0.00056 1.9E-08 72.5 2.9 33 41-73 2-38 (499)
191 2gag_A Heterotetrameric sarcos 96.7 0.0007 2.4E-08 77.6 3.2 63 215-286 325-392 (965)
192 2cdu_A NADPH oxidase; flavoenz 96.6 0.00084 2.9E-08 70.2 3.4 34 42-75 1-37 (452)
193 2gqw_A Ferredoxin reductase; f 96.6 0.001 3.5E-08 68.5 4.0 36 40-75 6-44 (408)
194 2xag_A Lysine-specific histone 96.6 0.0012 4.2E-08 74.0 4.8 39 39-77 276-315 (852)
195 3oc4_A Oxidoreductase, pyridin 96.6 0.001 3.5E-08 69.5 3.8 35 42-76 3-40 (452)
196 3kd9_A Coenzyme A disulfide re 96.6 0.0012 4E-08 69.0 4.1 36 41-76 3-41 (449)
197 1m6i_A Programmed cell death p 96.6 0.0011 3.8E-08 70.1 3.9 60 213-287 233-292 (493)
198 1mo9_A ORF3; nucleotide bindin 96.5 0.01 3.5E-07 63.2 10.7 33 42-74 215-248 (523)
199 1cjc_A Protein (adrenodoxin re 96.4 0.0016 5.5E-08 68.1 4.1 37 40-76 5-44 (460)
200 3cgb_A Pyridine nucleotide-dis 96.4 0.0015 5.1E-08 68.8 3.8 35 41-75 36-73 (480)
201 2v3a_A Rubredoxin reductase; a 96.4 0.014 4.7E-07 59.4 10.7 33 42-74 146-179 (384)
202 3ics_A Coenzyme A-disulfide re 96.4 0.0018 6.2E-08 70.1 4.1 37 39-75 34-73 (588)
203 1gte_A Dihydropyrimidine dehyd 96.4 0.0017 5.8E-08 74.9 4.0 37 40-76 186-224 (1025)
204 1nhp_A NADH peroxidase; oxidor 96.4 0.0015 5.2E-08 68.1 3.3 34 42-75 1-37 (447)
205 1y56_A Hypothetical protein PH 96.3 0.0014 4.9E-08 69.2 2.7 36 41-76 108-143 (493)
206 3ab1_A Ferredoxin--NADP reduct 96.3 0.019 6.5E-07 57.6 11.0 59 218-286 214-272 (360)
207 3h28_A Sulfide-quinone reducta 96.3 0.002 7E-08 66.7 3.5 34 42-75 3-39 (430)
208 1fl2_A Alkyl hydroperoxide red 96.2 0.019 6.5E-07 56.2 10.3 54 219-282 193-247 (310)
209 1lqt_A FPRA; NADP+ derivative, 96.2 0.0023 7.7E-08 66.9 3.5 35 41-75 3-45 (456)
210 1trb_A Thioredoxin reductase; 96.1 0.017 5.7E-07 56.8 9.4 56 217-282 195-252 (320)
211 3h8l_A NADH oxidase; membrane 96.0 0.0027 9.3E-08 65.3 3.2 33 43-75 3-39 (409)
212 3sx6_A Sulfide-quinone reducta 96.0 0.0043 1.5E-07 64.4 4.7 34 42-75 5-42 (437)
213 3ntd_A FAD-dependent pyridine 95.9 0.0039 1.3E-07 67.0 3.6 35 42-76 2-39 (565)
214 4eqs_A Coenzyme A disulfide re 95.9 0.0052 1.8E-07 63.8 4.5 33 43-75 2-37 (437)
215 3ayj_A Pro-enzyme of L-phenyla 95.9 0.0029 1E-07 69.1 2.6 35 41-75 56-100 (721)
216 2eq6_A Pyruvate dehydrogenase 95.8 0.017 5.7E-07 60.4 8.2 32 42-73 170-202 (464)
217 2yqu_A 2-oxoglutarate dehydrog 95.8 0.015 5E-07 60.7 7.6 32 42-73 168-200 (455)
218 1v59_A Dihydrolipoamide dehydr 95.7 0.016 5.4E-07 60.9 7.5 33 42-74 184-217 (478)
219 1ges_A Glutathione reductase; 95.7 0.018 6E-07 60.0 7.6 31 43-73 169-200 (450)
220 2hqm_A GR, grase, glutathione 95.7 0.012 4.1E-07 61.8 6.2 31 43-73 187-218 (479)
221 3klj_A NAD(FAD)-dependent dehy 95.6 0.007 2.4E-07 61.6 4.2 38 39-76 7-45 (385)
222 2zbw_A Thioredoxin reductase; 95.6 0.041 1.4E-06 54.3 9.7 59 218-287 203-262 (335)
223 3vrd_B FCCB subunit, flavocyto 95.6 0.0059 2E-07 62.5 3.5 58 215-288 211-268 (401)
224 2q0l_A TRXR, thioredoxin reduc 95.6 0.043 1.5E-06 53.5 9.6 55 219-283 192-247 (311)
225 3uox_A Otemo; baeyer-villiger 95.5 0.048 1.7E-06 58.1 10.4 34 42-75 186-220 (545)
226 2qae_A Lipoamide, dihydrolipoy 95.5 0.073 2.5E-06 55.5 11.6 32 42-73 175-207 (468)
227 4g6h_A Rotenone-insensitive NA 95.4 0.0089 3E-07 63.2 4.1 36 39-74 40-76 (502)
228 2r9z_A Glutathione amide reduc 95.3 0.041 1.4E-06 57.4 9.0 31 43-73 168-199 (463)
229 1hyu_A AHPF, alkyl hydroperoxi 95.3 0.073 2.5E-06 56.4 10.9 54 219-282 404-458 (521)
230 3ic9_A Dihydrolipoamide dehydr 95.3 0.043 1.5E-06 57.7 8.9 33 42-74 175-208 (492)
231 3urh_A Dihydrolipoyl dehydroge 95.2 0.11 3.7E-06 54.6 11.8 31 43-73 200-231 (491)
232 3s5w_A L-ornithine 5-monooxyge 95.0 0.078 2.7E-06 55.1 9.9 51 217-278 327-378 (463)
233 3ntd_A FAD-dependent pyridine 94.8 0.12 4E-06 55.3 10.7 31 43-73 153-184 (565)
234 1zmd_A Dihydrolipoyl dehydroge 94.7 0.16 5.6E-06 52.9 11.5 32 42-73 179-211 (474)
235 3o0h_A Glutathione reductase; 94.4 0.073 2.5E-06 55.8 7.9 32 42-73 192-224 (484)
236 3lad_A Dihydrolipoamide dehydr 94.4 0.28 9.5E-06 51.2 12.3 32 42-73 181-213 (476)
237 3lzw_A Ferredoxin--NADP reduct 94.4 0.08 2.7E-06 52.0 7.6 58 219-287 202-260 (332)
238 3ics_A Coenzyme A-disulfide re 94.1 0.11 3.6E-06 56.1 8.4 31 43-73 189-220 (588)
239 1xdi_A RV3303C-LPDA; reductase 94.0 0.13 4.5E-06 54.1 8.8 31 43-73 184-215 (499)
240 3dgh_A TRXR-1, thioredoxin red 93.9 0.23 8E-06 51.9 10.5 55 218-282 239-294 (483)
241 3dgz_A Thioredoxin reductase 2 93.9 0.25 8.7E-06 51.7 10.8 54 218-281 237-291 (488)
242 3oc4_A Oxidoreductase, pyridin 93.7 0.34 1.2E-05 50.1 11.3 33 42-74 148-181 (452)
243 4dna_A Probable glutathione re 93.5 0.071 2.4E-06 55.6 5.6 32 42-73 171-203 (463)
244 1fec_A Trypanothione reductase 92.0 0.5 1.7E-05 49.5 9.6 48 217-278 242-289 (490)
245 2wpf_A Trypanothione reductase 91.8 0.57 2E-05 49.1 9.9 50 217-280 246-295 (495)
246 1gte_A Dihydropyrimidine dehyd 91.8 0.58 2E-05 53.8 10.6 31 43-73 334-366 (1025)
247 1nhp_A NADH peroxidase; oxidor 91.7 0.1 3.5E-06 54.1 3.9 35 40-74 148-183 (447)
248 3fwz_A Inner membrane protein 91.2 0.16 5.5E-06 43.1 4.0 31 43-73 9-40 (140)
249 4gcm_A TRXR, thioredoxin reduc 90.9 0.14 4.9E-06 49.9 3.8 33 43-75 147-180 (312)
250 3klj_A NAD(FAD)-dependent dehy 90.6 0.14 4.8E-06 51.9 3.5 33 43-75 148-181 (385)
251 2g1u_A Hypothetical protein TM 90.6 0.15 5E-06 44.2 3.2 32 42-73 20-52 (155)
252 3llv_A Exopolyphosphatase-rela 90.5 0.14 4.9E-06 43.4 3.0 31 43-73 8-39 (141)
253 1lss_A TRK system potassium up 90.0 0.17 6E-06 42.5 3.1 30 43-72 6-36 (140)
254 1lvl_A Dihydrolipoamide dehydr 89.7 0.18 6.3E-06 52.3 3.6 34 42-75 172-206 (458)
255 1id1_A Putative potassium chan 89.2 0.21 7E-06 43.1 3.0 30 43-72 5-35 (153)
256 1ebd_A E3BD, dihydrolipoamide 88.9 0.23 7.8E-06 51.5 3.6 33 42-74 171-204 (455)
257 4a5l_A Thioredoxin reductase; 88.8 0.26 8.9E-06 47.9 3.8 33 42-74 153-186 (314)
258 1xhc_A NADH oxidase /nitrite r 88.7 0.22 7.4E-06 50.1 3.2 33 42-74 144-177 (367)
259 3ic5_A Putative saccharopine d 86.6 0.34 1.2E-05 39.2 2.6 31 43-73 7-39 (118)
260 2hmt_A YUAA protein; RCK, KTN, 86.4 0.32 1.1E-05 41.0 2.4 31 43-73 8-39 (144)
261 2gqw_A Ferredoxin reductase; f 86.3 0.41 1.4E-05 48.8 3.6 33 42-74 146-179 (408)
262 3cgb_A Pyridine nucleotide-dis 86.2 0.28 9.7E-06 51.2 2.4 34 41-74 186-220 (480)
263 3d1c_A Flavin-containing putat 85.7 0.41 1.4E-05 47.7 3.2 32 43-74 168-200 (369)
264 2bc0_A NADH oxidase; flavoprot 85.5 0.47 1.6E-05 49.7 3.6 34 42-75 195-229 (490)
265 2gv8_A Monooxygenase; FMO, FAD 85.4 0.48 1.6E-05 48.9 3.6 32 42-73 213-246 (447)
266 2xve_A Flavin-containing monoo 85.3 0.6 2.1E-05 48.5 4.3 32 43-74 199-231 (464)
267 1ojt_A Surface protein; redox- 84.7 0.52 1.8E-05 49.2 3.5 33 42-74 186-219 (482)
268 3hn2_A 2-dehydropantoate 2-red 84.3 0.72 2.5E-05 45.0 4.1 31 43-73 4-35 (312)
269 2a8x_A Dihydrolipoyl dehydroge 84.2 0.59 2E-05 48.5 3.6 33 42-74 172-205 (464)
270 4eqs_A Coenzyme A disulfide re 84.0 0.63 2.1E-05 47.9 3.7 33 43-75 149-182 (437)
271 1q1r_A Putidaredoxin reductase 84.0 0.62 2.1E-05 47.8 3.7 34 42-75 150-184 (431)
272 1onf_A GR, grase, glutathione 83.8 0.65 2.2E-05 48.7 3.8 34 42-75 177-211 (500)
273 3kd9_A Coenzyme A disulfide re 83.7 0.63 2.2E-05 48.0 3.6 33 43-75 150-183 (449)
274 3l4b_C TRKA K+ channel protien 83.6 0.46 1.6E-05 43.6 2.3 30 44-73 3-33 (218)
275 2bcg_G Secretory pathway GDP d 83.6 0.94 3.2E-05 46.8 4.9 60 202-276 238-299 (453)
276 3gwf_A Cyclohexanone monooxyge 83.5 0.69 2.3E-05 49.1 3.8 33 42-74 179-212 (540)
277 3ef6_A Toluene 1,2-dioxygenase 83.4 0.66 2.3E-05 47.2 3.6 34 42-75 144-178 (410)
278 1dxl_A Dihydrolipoamide dehydr 83.2 0.54 1.8E-05 48.8 2.8 33 42-74 178-211 (470)
279 1vdc_A NTR, NADPH dependent th 82.9 0.79 2.7E-05 44.8 3.8 57 218-282 207-264 (333)
280 3i83_A 2-dehydropantoate 2-red 82.9 0.7 2.4E-05 45.3 3.4 31 43-73 4-35 (320)
281 2cdu_A NADPH oxidase; flavoenz 82.8 0.77 2.6E-05 47.4 3.8 32 43-74 151-183 (452)
282 4ap3_A Steroid monooxygenase; 82.8 0.72 2.4E-05 49.0 3.6 34 42-75 192-226 (549)
283 2cul_A Glucose-inhibited divis 82.2 1.6 5.6E-05 40.3 5.5 48 214-276 76-124 (232)
284 2a87_A TRXR, TR, thioredoxin r 82.1 0.87 3E-05 44.7 3.8 33 42-74 156-189 (335)
285 1zk7_A HGII, reductase, mercur 82.0 0.82 2.8E-05 47.4 3.7 33 43-75 178-211 (467)
286 2q7v_A Thioredoxin reductase; 81.5 0.96 3.3E-05 44.1 3.8 53 219-282 201-254 (325)
287 3rui_A Ubiquitin-like modifier 80.9 1.3 4.4E-05 43.6 4.4 37 41-77 34-72 (340)
288 3ado_A Lambda-crystallin; L-gu 80.6 0.83 2.8E-05 44.7 2.9 30 43-72 8-38 (319)
289 3dfz_A SIRC, precorrin-2 dehyd 80.6 1 3.4E-05 41.6 3.3 29 43-71 33-62 (223)
290 1jw9_B Molybdopterin biosynthe 80.3 0.95 3.3E-05 42.6 3.2 33 42-74 32-66 (249)
291 3itj_A Thioredoxin reductase 1 80.2 1.1 3.8E-05 43.7 3.8 34 42-75 174-208 (338)
292 3fg2_P Putative rubredoxin red 80.2 1 3.5E-05 45.6 3.6 34 42-75 143-177 (404)
293 3cty_A Thioredoxin reductase; 80.1 1.1 3.9E-05 43.4 3.8 32 43-74 157-189 (319)
294 3lxd_A FAD-dependent pyridine 80.0 1.1 3.6E-05 45.7 3.6 34 42-75 153-187 (415)
295 3l8k_A Dihydrolipoyl dehydroge 80.0 1 3.6E-05 46.6 3.6 34 42-75 173-207 (466)
296 1kyq_A Met8P, siroheme biosynt 79.5 0.8 2.7E-05 43.7 2.3 30 43-72 15-45 (274)
297 4g65_A TRK system potassium up 79.5 0.82 2.8E-05 47.4 2.6 31 43-73 5-36 (461)
298 3dk9_A Grase, GR, glutathione 79.4 1.1 3.8E-05 46.5 3.6 32 43-74 189-221 (478)
299 3g17_A Similar to 2-dehydropan 79.2 0.81 2.8E-05 44.2 2.3 31 43-73 4-35 (294)
300 3ghy_A Ketopantoate reductase 78.9 1 3.5E-05 44.4 3.0 30 43-72 5-35 (335)
301 3fbs_A Oxidoreductase; structu 78.9 1.7 6E-05 41.3 4.6 32 42-74 142-174 (297)
302 4e12_A Diketoreductase; oxidor 78.8 1.1 3.8E-05 43.0 3.2 31 43-73 6-37 (283)
303 2raf_A Putative dinucleotide-b 78.7 1.3 4.5E-05 40.3 3.5 31 43-73 21-52 (209)
304 1f0y_A HCDH, L-3-hydroxyacyl-C 78.7 1.1 3.8E-05 43.4 3.2 31 43-73 17-48 (302)
305 2x8g_A Thioredoxin glutathione 78.6 1 3.5E-05 48.4 3.1 30 43-72 288-318 (598)
306 1ks9_A KPA reductase;, 2-dehyd 78.5 1.2 4.2E-05 42.5 3.4 30 44-73 3-33 (291)
307 1d5t_A Guanine nucleotide diss 78.3 1 3.6E-05 46.1 3.0 60 202-276 230-289 (433)
308 3oj0_A Glutr, glutamyl-tRNA re 78.3 0.9 3.1E-05 38.5 2.1 31 43-73 23-54 (144)
309 3c85_A Putative glutathione-re 78.3 1.2 4E-05 39.5 2.9 31 43-73 41-73 (183)
310 2a9f_A Putative malic enzyme ( 77.9 1.3 4.5E-05 44.3 3.4 33 41-73 188-222 (398)
311 1vg0_A RAB proteins geranylger 77.3 3 0.0001 44.8 6.2 61 202-275 374-435 (650)
312 1lld_A L-lactate dehydrogenase 77.1 1.4 4.7E-05 43.1 3.3 31 43-73 9-42 (319)
313 4dio_A NAD(P) transhydrogenase 76.8 1.5 5E-05 44.3 3.4 32 42-73 191-223 (405)
314 1vl6_A Malate oxidoreductase; 76.4 1.4 4.8E-05 44.0 3.1 34 41-74 192-227 (388)
315 3f8d_A Thioredoxin reductase ( 76.4 1.6 5.5E-05 42.1 3.6 34 42-75 155-189 (323)
316 3l9w_A Glutathione-regulated p 76.3 1.3 4.5E-05 45.1 3.0 31 43-73 6-37 (413)
317 4b1b_A TRXR, thioredoxin reduc 76.2 1.5 5.2E-05 46.4 3.5 31 43-73 225-256 (542)
318 2ywl_A Thioredoxin reductase r 76.2 2 6.9E-05 37.6 3.9 56 213-287 63-118 (180)
319 1zud_1 Adenylyltransferase THI 75.9 2.3 7.7E-05 40.0 4.3 33 42-74 29-63 (251)
320 2ew2_A 2-dehydropantoate 2-red 75.7 1.5 5.1E-05 42.5 3.2 31 43-73 5-36 (316)
321 3p2y_A Alanine dehydrogenase/p 75.2 1.6 5.5E-05 43.6 3.2 32 42-73 185-217 (381)
322 2y0c_A BCEC, UDP-glucose dehyd 75.0 1.5 5.3E-05 45.5 3.2 32 42-73 9-41 (478)
323 1mv8_A GMD, GDP-mannose 6-dehy 74.8 2.1 7.1E-05 43.9 4.1 30 44-73 3-33 (436)
324 3vh1_A Ubiquitin-like modifier 74.8 2.5 8.4E-05 44.8 4.6 35 42-76 328-364 (598)
325 3hwr_A 2-dehydropantoate 2-red 74.5 1.6 5.6E-05 42.6 3.1 29 43-72 21-50 (318)
326 3qfa_A Thioredoxin reductase 1 74.0 1.6 5.6E-05 45.9 3.1 30 43-72 212-242 (519)
327 3r9u_A Thioredoxin reductase; 73.3 2.2 7.5E-05 41.0 3.6 34 42-75 148-182 (315)
328 1x13_A NAD(P) transhydrogenase 73.0 1.9 6.6E-05 43.6 3.2 32 42-73 173-205 (401)
329 1txg_A Glycerol-3-phosphate de 73.0 1.9 6.6E-05 42.2 3.2 28 44-71 3-31 (335)
330 1nyt_A Shikimate 5-dehydrogena 72.9 2 6.8E-05 40.9 3.2 30 43-72 121-151 (271)
331 3h8v_A Ubiquitin-like modifier 72.8 2.2 7.6E-05 41.0 3.4 35 41-75 36-72 (292)
332 3lk7_A UDP-N-acetylmuramoylala 72.7 2.7 9.3E-05 43.3 4.3 31 43-73 11-42 (451)
333 3ond_A Adenosylhomocysteinase; 72.6 2 6.7E-05 44.4 3.2 30 43-72 267-297 (488)
334 4g6h_A Rotenone-insensitive NA 72.6 2 6.7E-05 45.1 3.3 33 43-75 219-266 (502)
335 2aef_A Calcium-gated potassium 72.5 1.6 5.3E-05 40.5 2.2 30 43-73 11-41 (234)
336 4a9w_A Monooxygenase; baeyer-v 72.1 2.2 7.6E-05 41.8 3.4 31 42-73 164-195 (357)
337 1pzg_A LDH, lactate dehydrogen 72.0 2.1 7.2E-05 42.1 3.2 31 43-73 11-43 (331)
338 2vdc_G Glutamate synthase [NAD 72.0 2.1 7.3E-05 44.2 3.3 33 42-74 265-299 (456)
339 1bg6_A N-(1-D-carboxylethyl)-L 72.0 2.1 7.1E-05 42.4 3.2 31 43-73 6-37 (359)
340 1jay_A Coenzyme F420H2:NADP+ o 71.8 2.4 8.1E-05 38.4 3.3 29 44-72 3-33 (212)
341 4gsl_A Ubiquitin-like modifier 71.7 2.4 8.2E-05 45.0 3.6 36 41-76 326-363 (615)
342 1cjc_A Protein (adrenodoxin re 71.6 2.3 8E-05 43.9 3.6 54 218-279 269-335 (460)
343 1pjc_A Protein (L-alanine dehy 71.1 2.2 7.6E-05 42.5 3.1 32 42-73 168-200 (361)
344 3gg2_A Sugar dehydrogenase, UD 71.0 2.2 7.6E-05 43.9 3.2 31 43-73 4-35 (450)
345 2v6b_A L-LDH, L-lactate dehydr 70.9 2.3 8E-05 41.2 3.2 30 44-73 3-35 (304)
346 2dpo_A L-gulonate 3-dehydrogen 70.8 2.2 7.6E-05 41.7 3.0 31 43-73 8-39 (319)
347 2eez_A Alanine dehydrogenase; 70.8 2.3 7.8E-05 42.6 3.1 32 42-73 167-199 (369)
348 1zcj_A Peroxisomal bifunctiona 70.5 2.4 8.3E-05 43.8 3.4 31 43-73 39-70 (463)
349 2ewd_A Lactate dehydrogenase,; 70.5 3 0.0001 40.6 3.9 31 43-73 6-38 (317)
350 1l7d_A Nicotinamide nucleotide 70.4 2.5 8.7E-05 42.5 3.4 32 42-73 173-205 (384)
351 1z82_A Glycerol-3-phosphate de 70.3 2.5 8.6E-05 41.5 3.3 33 40-72 13-46 (335)
352 3nks_A Protoporphyrinogen oxid 69.8 1.4 4.9E-05 45.5 1.4 65 202-281 230-294 (477)
353 3vtf_A UDP-glucose 6-dehydroge 69.8 2.4 8.3E-05 43.3 3.1 33 41-73 21-54 (444)
354 3k6j_A Protein F01G10.3, confi 69.7 3.6 0.00012 42.3 4.3 31 43-73 56-87 (460)
355 3ego_A Probable 2-dehydropanto 69.7 2.8 9.5E-05 40.7 3.4 31 43-73 4-34 (307)
356 2vns_A Metalloreductase steap3 69.4 2.6 8.9E-05 38.5 3.0 31 43-73 30-61 (215)
357 3qha_A Putative oxidoreductase 69.3 3.8 0.00013 39.4 4.3 32 42-73 16-48 (296)
358 3k96_A Glycerol-3-phosphate de 69.2 2.7 9.1E-05 41.8 3.2 32 42-73 30-62 (356)
359 2vhw_A Alanine dehydrogenase; 69.1 2.6 8.9E-05 42.3 3.1 31 42-72 169-200 (377)
360 3phh_A Shikimate dehydrogenase 69.1 2.8 9.6E-05 39.8 3.2 32 42-73 119-151 (269)
361 2hjr_A Malate dehydrogenase; m 69.1 2.7 9.2E-05 41.3 3.2 31 43-73 16-48 (328)
362 2weu_A Tryptophan 5-halogenase 68.7 4.5 0.00015 42.2 5.0 50 212-275 179-228 (511)
363 3pdu_A 3-hydroxyisobutyrate de 68.5 3.7 0.00012 39.3 4.0 31 43-73 3-34 (287)
364 1o94_A Tmadh, trimethylamine d 67.9 2.9 9.9E-05 46.0 3.5 31 43-73 530-563 (729)
365 2vvm_A Monoamine oxidase N; FA 67.9 6.4 0.00022 40.7 6.0 51 211-276 260-311 (495)
366 2egg_A AROE, shikimate 5-dehyd 67.9 3.2 0.00011 40.1 3.4 31 43-73 143-175 (297)
367 2h78_A Hibadh, 3-hydroxyisobut 67.8 3.9 0.00013 39.3 4.1 31 43-73 5-36 (302)
368 1evy_A Glycerol-3-phosphate de 67.7 2.4 8.3E-05 42.2 2.6 31 43-73 17-48 (366)
369 1m6i_A Programmed cell death p 67.7 4.4 0.00015 42.2 4.7 37 39-75 9-48 (493)
370 4dll_A 2-hydroxy-3-oxopropiona 67.4 4.1 0.00014 39.7 4.1 32 42-73 32-64 (320)
371 1leh_A Leucine dehydrogenase; 67.4 3 0.0001 41.5 3.2 30 43-72 175-205 (364)
372 3dtt_A NADP oxidoreductase; st 67.1 3.2 0.00011 38.7 3.1 32 42-73 20-52 (245)
373 3fbt_A Chorismate mutase and s 67.0 4.2 0.00014 38.8 4.0 32 42-73 123-156 (282)
374 3d4o_A Dipicolinate synthase s 67.0 3.1 0.00011 40.0 3.1 31 43-73 157-188 (293)
375 1a5z_A L-lactate dehydrogenase 66.9 3.2 0.00011 40.6 3.2 30 44-73 3-35 (319)
376 2pv7_A T-protein [includes: ch 66.7 3.4 0.00012 39.8 3.3 30 43-72 23-54 (298)
377 3h5n_A MCCB protein; ubiquitin 66.5 3 0.0001 41.4 2.9 34 41-74 118-153 (353)
378 3ojo_A CAP5O; rossmann fold, c 66.4 3.7 0.00013 41.9 3.6 31 43-73 13-44 (431)
379 1nvt_A Shikimate 5'-dehydrogen 65.9 3.5 0.00012 39.5 3.2 29 43-72 130-159 (287)
380 1t2d_A LDH-P, L-lactate dehydr 65.8 3.4 0.00012 40.4 3.2 31 43-73 6-38 (322)
381 2rir_A Dipicolinate synthase, 65.7 3.4 0.00012 39.8 3.1 31 43-73 159-190 (300)
382 1p77_A Shikimate 5-dehydrogena 65.6 2.5 8.6E-05 40.2 2.1 31 43-73 121-152 (272)
383 2x5o_A UDP-N-acetylmuramoylala 65.6 2.8 9.4E-05 43.0 2.6 32 43-74 7-39 (439)
384 1w4x_A Phenylacetone monooxyge 65.6 3.7 0.00013 43.3 3.6 34 42-75 187-221 (542)
385 3pef_A 6-phosphogluconate dehy 65.5 3.6 0.00012 39.3 3.2 31 43-73 3-34 (287)
386 3iwa_A FAD-dependent pyridine 65.4 3.8 0.00013 42.3 3.6 34 42-75 160-195 (472)
387 3gvp_A Adenosylhomocysteinase 65.2 3.6 0.00012 41.7 3.2 31 43-73 222-253 (435)
388 3doj_A AT3G25530, dehydrogenas 65.1 3.7 0.00013 39.8 3.2 32 42-73 22-54 (310)
389 1vpd_A Tartronate semialdehyde 65.0 4.8 0.00016 38.6 4.1 30 43-72 7-37 (299)
390 2e4g_A Tryptophan halogenase; 65.0 4.6 0.00016 42.7 4.2 50 212-275 200-250 (550)
391 2hk9_A Shikimate dehydrogenase 65.0 3.7 0.00013 39.1 3.2 31 43-73 131-162 (275)
392 2gag_A Heterotetrameric sarcos 64.9 3.4 0.00012 47.1 3.3 33 43-75 286-319 (965)
393 3g0o_A 3-hydroxyisobutyrate de 64.9 3.6 0.00012 39.7 3.2 31 43-73 9-40 (303)
394 3tnl_A Shikimate dehydrogenase 64.7 3.7 0.00013 40.0 3.1 30 43-72 156-187 (315)
395 3jyo_A Quinate/shikimate dehyd 64.6 3.8 0.00013 39.2 3.2 31 43-73 129-161 (283)
396 2gf2_A Hibadh, 3-hydroxyisobut 64.6 5.1 0.00017 38.3 4.2 30 44-73 3-33 (296)
397 3dfu_A Uncharacterized protein 64.6 3 0.0001 38.6 2.3 29 43-71 8-37 (232)
398 3ius_A Uncharacterized conserv 64.4 4.3 0.00015 38.5 3.5 31 43-73 7-38 (286)
399 1yj8_A Glycerol-3-phosphate de 64.3 3.5 0.00012 41.2 3.0 32 43-74 23-62 (375)
400 1hyh_A L-hicdh, L-2-hydroxyiso 64.2 3.8 0.00013 39.8 3.1 31 43-73 3-36 (309)
401 3tl2_A Malate dehydrogenase; c 64.0 3.9 0.00013 39.8 3.2 30 43-72 10-41 (315)
402 4a7p_A UDP-glucose dehydrogena 63.9 4.2 0.00015 41.7 3.5 34 41-74 8-42 (446)
403 2f1k_A Prephenate dehydrogenas 63.9 4 0.00014 38.8 3.2 30 44-73 3-33 (279)
404 3gpi_A NAD-dependent epimerase 63.8 4 0.00014 38.7 3.2 31 43-73 5-36 (286)
405 1yqg_A Pyrroline-5-carboxylate 63.7 4.1 0.00014 38.2 3.2 30 44-73 3-34 (263)
406 1c1d_A L-phenylalanine dehydro 63.6 3.9 0.00013 40.5 3.1 29 43-71 177-206 (355)
407 1x0v_A GPD-C, GPDH-C, glycerol 63.3 3.2 0.00011 41.0 2.5 31 43-73 10-48 (354)
408 1tt5_B Ubiquitin-activating en 63.3 4.9 0.00017 41.0 3.8 34 41-74 40-75 (434)
409 3mog_A Probable 3-hydroxybutyr 63.1 3.8 0.00013 42.6 3.0 31 43-73 7-38 (483)
410 1lu9_A Methylene tetrahydromet 62.8 4.1 0.00014 39.0 3.1 30 43-72 121-152 (287)
411 3don_A Shikimate dehydrogenase 62.5 3.7 0.00013 39.1 2.6 31 43-73 119-151 (277)
412 3u62_A Shikimate dehydrogenase 62.5 4.2 0.00014 38.2 3.0 31 43-73 110-142 (253)
413 2uyy_A N-PAC protein; long-cha 62.4 4.2 0.00014 39.5 3.1 31 43-73 32-63 (316)
414 3ew7_A LMO0794 protein; Q8Y8U8 62.0 4.9 0.00017 36.2 3.3 30 44-73 3-34 (221)
415 1y8q_A Ubiquitin-like 1 activa 61.7 5.5 0.00019 39.4 3.8 34 41-74 36-71 (346)
416 4huj_A Uncharacterized protein 61.7 2.5 8.7E-05 38.7 1.3 31 43-73 25-57 (220)
417 3cky_A 2-hydroxymethyl glutara 61.4 6.5 0.00022 37.7 4.2 30 43-72 6-36 (301)
418 1edz_A 5,10-methylenetetrahydr 61.4 6.9 0.00024 38.0 4.3 32 41-72 177-210 (320)
419 4ezb_A Uncharacterized conserv 61.4 4.8 0.00016 39.2 3.3 31 43-73 26-58 (317)
420 4ffl_A PYLC; amino acid, biosy 61.1 5.5 0.00019 39.4 3.8 31 44-74 4-35 (363)
421 1ur5_A Malate dehydrogenase; o 61.0 4.8 0.00016 39.1 3.2 30 43-72 4-35 (309)
422 1npy_A Hypothetical shikimate 61.0 6.1 0.00021 37.5 3.9 30 43-72 121-152 (271)
423 3n58_A Adenosylhomocysteinase; 60.9 4.8 0.00016 41.0 3.2 31 43-73 249-280 (464)
424 3o8q_A Shikimate 5-dehydrogena 60.9 5.2 0.00018 38.2 3.3 31 43-73 128-160 (281)
425 3pwz_A Shikimate dehydrogenase 60.8 5 0.00017 38.2 3.2 32 42-73 121-154 (272)
426 4gx0_A TRKA domain protein; me 60.8 4.7 0.00016 42.8 3.4 33 42-74 349-382 (565)
427 2g5c_A Prephenate dehydrogenas 60.7 4.8 0.00016 38.2 3.1 29 44-72 4-35 (281)
428 1dlj_A UDP-glucose dehydrogena 60.7 4.9 0.00017 40.7 3.3 30 44-73 3-32 (402)
429 3t4e_A Quinate/shikimate dehyd 60.7 4.9 0.00017 39.1 3.1 30 43-72 150-181 (312)
430 1guz_A Malate dehydrogenase; o 60.7 5.2 0.00018 38.8 3.4 30 44-73 3-35 (310)
431 3ce6_A Adenosylhomocysteinase; 60.5 4.7 0.00016 41.8 3.2 31 43-73 276-307 (494)
432 2aqj_A Tryptophan halogenase, 60.4 7.5 0.00026 40.9 4.8 50 212-275 171-220 (538)
433 2dkh_A 3-hydroxybenzoate hydro 60.4 7.1 0.00024 42.1 4.7 60 212-278 147-212 (639)
434 3o38_A Short chain dehydrogena 60.3 4.6 0.00016 37.9 2.9 30 44-73 25-57 (266)
435 3h2s_A Putative NADH-flavin re 60.1 5.3 0.00018 36.1 3.2 30 44-73 3-34 (224)
436 3ggo_A Prephenate dehydrogenas 60.0 5 0.00017 39.0 3.1 31 43-73 35-68 (314)
437 1hdo_A Biliverdin IX beta redu 60.0 5.3 0.00018 35.4 3.1 30 44-73 6-37 (206)
438 3pqe_A L-LDH, L-lactate dehydr 60.0 5.1 0.00017 39.2 3.2 30 43-72 7-39 (326)
439 3qsg_A NAD-binding phosphogluc 59.9 5.1 0.00017 38.9 3.2 31 42-72 25-57 (312)
440 3pid_A UDP-glucose 6-dehydroge 59.9 5.2 0.00018 40.8 3.3 31 43-73 38-68 (432)
441 2dvm_A Malic enzyme, 439AA lon 59.8 4.4 0.00015 41.4 2.7 28 43-70 188-219 (439)
442 3e8x_A Putative NAD-dependent 59.7 5.3 0.00018 36.6 3.2 31 43-73 23-55 (236)
443 3c24_A Putative oxidoreductase 59.5 5.1 0.00018 38.2 3.1 30 43-72 13-44 (286)
444 3i6d_A Protoporphyrinogen oxid 59.3 14 0.00049 37.5 6.7 46 221-281 248-293 (470)
445 1pjq_A CYSG, siroheme synthase 59.1 4.7 0.00016 41.6 2.9 30 43-72 14-44 (457)
446 3c7a_A Octopine dehydrogenase; 58.9 4.7 0.00016 40.7 2.8 28 43-70 4-33 (404)
447 2d5c_A AROE, shikimate 5-dehyd 58.7 5.3 0.00018 37.6 3.0 31 43-73 118-149 (263)
448 3g79_A NDP-N-acetyl-D-galactos 58.4 7.6 0.00026 40.2 4.3 32 43-74 20-54 (478)
449 3h9u_A Adenosylhomocysteinase; 58.4 5.5 0.00019 40.4 3.2 30 43-72 213-243 (436)
450 1ff9_A Saccharopine reductase; 58.3 7.5 0.00026 39.9 4.2 30 43-72 5-35 (450)
451 1oju_A MDH, malate dehydrogena 58.2 5.8 0.0002 38.1 3.2 30 44-73 3-35 (294)
452 3eag_A UDP-N-acetylmuramate:L- 57.9 7.5 0.00026 38.0 4.0 31 43-73 6-38 (326)
453 3dqp_A Oxidoreductase YLBE; al 57.8 6.4 0.00022 35.5 3.3 30 44-73 3-34 (219)
454 3gvi_A Malate dehydrogenase; N 56.9 6.2 0.00021 38.6 3.2 31 43-73 9-41 (324)
455 1gpj_A Glutamyl-tRNA reductase 56.7 6 0.00021 40.0 3.2 30 43-72 169-200 (404)
456 3ldh_A Lactate dehydrogenase; 56.6 6.3 0.00021 38.6 3.1 31 42-72 22-55 (330)
457 3l6d_A Putative oxidoreductase 56.6 6 0.0002 38.2 3.0 32 42-73 10-42 (306)
458 2wtb_A MFP2, fatty acid multif 56.5 5.8 0.0002 43.5 3.2 31 43-73 314-345 (725)
459 2i6t_A Ubiquitin-conjugating e 56.5 6.4 0.00022 38.1 3.2 31 43-73 16-49 (303)
460 1y8q_B Anthracycline-, ubiquit 56.4 5.6 0.00019 42.6 3.0 34 42-75 18-53 (640)
461 3k30_A Histamine dehydrogenase 56.3 6.7 0.00023 42.8 3.7 32 43-74 525-559 (690)
462 2pd4_A Enoyl-[acyl-carrier-pro 55.9 9.2 0.00032 36.0 4.2 30 44-73 9-42 (275)
463 3vku_A L-LDH, L-lactate dehydr 55.8 6.6 0.00023 38.4 3.2 30 43-72 11-43 (326)
464 3d1l_A Putative NADP oxidoredu 55.7 6.4 0.00022 37.0 3.0 30 43-72 12-43 (266)
465 2zyd_A 6-phosphogluconate dehy 55.3 7.1 0.00024 40.5 3.5 33 41-73 15-48 (480)
466 2rcy_A Pyrroline carboxylate r 55.3 6.2 0.00021 36.9 2.8 31 43-73 6-41 (262)
467 1pgj_A 6PGDH, 6-PGDH, 6-phosph 55.3 6.3 0.00021 40.9 3.1 31 43-73 3-34 (478)
468 2dbq_A Glyoxylate reductase; D 55.2 7.3 0.00025 38.2 3.4 31 43-73 152-183 (334)
469 2yjz_A Metalloreductase steap4 60.2 2.5 8.6E-05 38.2 0.0 31 43-73 21-52 (201)
470 2dkn_A 3-alpha-hydroxysteroid 55.0 7.5 0.00026 35.8 3.4 30 44-73 4-35 (255)
471 1i36_A Conserved hypothetical 55.0 5.7 0.0002 37.2 2.5 28 44-71 3-31 (264)
472 1lqt_A FPRA; NADP+ derivative, 54.9 7.6 0.00026 39.9 3.6 50 219-279 265-328 (456)
473 4e21_A 6-phosphogluconate dehy 54.9 6.9 0.00023 38.8 3.2 32 42-73 23-55 (358)
474 3ktd_A Prephenate dehydrogenas 54.7 6.7 0.00023 38.6 3.0 31 43-73 10-41 (341)
475 3p7m_A Malate dehydrogenase; p 54.6 7.1 0.00024 38.1 3.2 31 43-73 7-39 (321)
476 2pgd_A 6-phosphogluconate dehy 54.3 7.2 0.00025 40.5 3.3 31 43-73 4-35 (482)
477 1y6j_A L-lactate dehydrogenase 54.1 7.1 0.00024 38.0 3.1 32 42-73 8-42 (318)
478 3r6d_A NAD-dependent epimerase 54.0 7.4 0.00025 35.2 3.1 30 44-73 8-40 (221)
479 4a26_A Putative C-1-tetrahydro 53.8 10 0.00035 36.3 4.0 32 41-72 165-198 (300)
480 2o3j_A UDP-glucose 6-dehydroge 53.7 9.2 0.00031 39.6 4.0 31 43-73 11-44 (481)
481 1yb4_A Tartronic semialdehyde 53.7 6.7 0.00023 37.4 2.8 28 43-70 5-33 (295)
482 2p4q_A 6-phosphogluconate dehy 53.5 8.3 0.00028 40.1 3.7 33 41-73 10-43 (497)
483 4g65_A TRK system potassium up 53.5 7.4 0.00025 40.1 3.2 31 43-73 237-267 (461)
484 2o7s_A DHQ-SDH PR, bifunctiona 53.4 5.7 0.00019 41.7 2.4 30 43-72 366-396 (523)
485 4aj2_A L-lactate dehydrogenase 53.1 11 0.00038 36.9 4.2 32 41-72 19-53 (331)
486 3lov_A Protoporphyrinogen oxid 52.9 9.7 0.00033 39.1 4.1 46 221-282 249-294 (475)
487 3nv9_A Malic enzyme; rossmann 52.8 7.2 0.00025 39.6 2.9 33 42-74 220-256 (487)
488 3nep_X Malate dehydrogenase; h 52.6 8 0.00028 37.5 3.2 30 44-73 3-35 (314)
489 1np3_A Ketol-acid reductoisome 52.6 8 0.00027 38.0 3.2 30 43-72 18-48 (338)
490 2cvz_A Dehydrogenase, 3-hydrox 52.6 11 0.00039 35.6 4.3 30 44-73 4-33 (289)
491 3k7m_X 6-hydroxy-L-nicotine ox 52.6 12 0.00043 37.6 4.8 44 216-275 214-257 (431)
492 3k31_A Enoyl-(acyl-carrier-pro 52.6 9.8 0.00033 36.4 3.8 29 44-72 33-65 (296)
493 2h7i_A Enoyl-[acyl-carrier-pro 52.4 8.8 0.0003 36.0 3.4 29 44-72 10-42 (269)
494 2wyu_A Enoyl-[acyl carrier pro 52.3 9.8 0.00033 35.5 3.7 30 44-73 11-44 (261)
495 1lnq_A MTHK channels, potassiu 52.2 5.7 0.0002 38.9 2.1 30 43-73 117-147 (336)
496 2d0i_A Dehydrogenase; structur 52.1 9.7 0.00033 37.3 3.7 31 43-73 148-179 (333)
497 4a5o_A Bifunctional protein fo 52.1 11 0.00039 35.8 4.0 32 41-72 161-194 (286)
498 2gcg_A Glyoxylate reductase/hy 52.0 8.5 0.00029 37.6 3.3 31 43-73 157-188 (330)
499 3vps_A TUNA, NAD-dependent epi 51.9 8.3 0.00028 37.0 3.2 32 43-74 9-42 (321)
500 3zwc_A Peroxisomal bifunctiona 51.7 8.2 0.00028 42.3 3.4 31 43-73 318-349 (742)
No 1
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=100.00 E-value=3.7e-80 Score=666.49 Aligned_cols=499 Identities=24% Similarity=0.349 Sum_probs=366.1
Q ss_pred cccEEEECCCCchhHHHHhhhc--cCeEEEEccCCCCCCCCCccccccccccc----CCCCCCCCCcccccCCcccccCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ--NATVLLLEKGGSPYENPNITDTGNFATTL----LDPSPTSPSQQFISEDGVYNARA 114 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~--g~~VlvLE~G~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g 114 (570)
+|||||||+|.|||++|.||+| +.+|||||+|+....++....|..+.... .+|.|.+.++..+.++.+.+.+|
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~~~~~~~~p~~~~~~~~~~~~~w~~~t~pq~~~~~r~~~~~rG 81 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDENVLGAEAPLLAPGLVPNSIFDWNYTTTAQAGYNGRSIAYPRG 81 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCTTCGGGTSGGGSGGGSSSSTTBCCCBCCCCGGGTTCCCBCCCB
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcccCCCceeCcchHHHhcCCCccccccccccCCCCCCceEeccCC
Confidence 6999999999999999999998 79999999998764444444554443322 36889999999999999999999
Q ss_pred ceeccccccCceeeeCCChhhhh-------hCCCChhhhhhhhHHHHhhccC--------------C-----------CC
Q 008331 115 RVLGGGSVINAGFYTRASLRYVR-------EVGWTESLVNSSYEWVEKKVAH--------------E-----------PP 162 (570)
Q Consensus 115 ~~lGG~s~~~~~~~~r~~~~~~~-------~~gw~~~~l~~~~~~~~~~~~~--------------~-----------~~ 162 (570)
|+|||+|.+|+|+|.|+.+.+++ ..+|+|+++.+||++.|+.... + +.
T Consensus 82 k~lGGsS~iN~m~~~Rg~~~d~d~W~~~~G~~gWs~~~~~pyf~k~E~~~~~~~~~~~~~~~~~~~hG~~Gp~~v~~~~~ 161 (566)
T 3fim_B 82 RMLGGSSSVHYMVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEMVVPPADNHNTSGEFIPAVHGTNGSVSISLPGF 161 (566)
T ss_dssp CBTTGGGGTSCCBCCCCCHHHHHHHHHHHTCTTSSHHHHHHHHHHHEEECCCTTCCCCTTTSCGGGSCBSSSEEEBSCSS
T ss_pred cEEcCcccccceEEecCCHHHHHHHHhcCCCCCcCHHHHHHHHHHHhccCCccccccccccCCccccCCCCCeeeecCCC
Confidence 99999999999999999985432 2679999999999999875421 1 11
Q ss_pred CcchHHHHHHHHHHc--CCCCCCCCCcCCCCcceeeeeEECCCCccccHHH-hhh-hcCCCCeEEEecceEEEEEec---
Q 008331 163 MLQWQSAVRDGLLEA--GVLPYNGFTFDHIYGTKVSGTIFDEDGHRHSAAD-LLE-YADPEKLTVYLRAVVQRIKFT--- 235 (570)
Q Consensus 163 ~~~~~~~~~~~~~~~--G~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~-~l~-~~~~~g~~i~~~~~V~~i~~~--- 235 (570)
..+....+.+++.++ |++...++......++......+ .+|.|+++.. |+. ...++|++|++++.|+||+++
T Consensus 162 ~~~~~~~~~~a~~~~~~G~~~~~d~n~~~~~G~~~~~~~~-~~g~R~sa~~ayL~p~~~r~NL~Vlt~a~V~rIl~~~~~ 240 (566)
T 3fim_B 162 PTPLDDRVLATTQEQSEEFFFNPDMGTGHPLGISWSIASV-GNGQRSSSSTAYLRPAQSRPNLSVLINAQVTKLVNSGTT 240 (566)
T ss_dssp CCTHHHHHHHHHHHTHHHHCBCSCGGGSCCCEEEECCBSE-ETTEECCHHHHTHHHHTTCTTEEEESSCEEEEEECCEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCccCCCCCCCcceEEeeeeec-CCCEEcCHHHHHhhhhccCCCeEEECCCEEEEEEeecCC
Confidence 245667888999998 87543222111111221111112 2788888765 664 667899999999999999998
Q ss_pred CCCCCCCeEEEEEEEecCC-ceEEEEecCCCCceEEEcCCccccHHHHHHhCCCChhhhhhcCCcccccCCccCcccccC
Q 008331 236 ETGRAKPTAHCVTFYDHVG-ARHRACLNNGGKNEIILSAGAIGSPQLLMLSGVGPANELRKRGIRVVVDQPNVGQGMSDN 314 (570)
Q Consensus 236 ~~~~~~~~v~GV~~~~~~G-~~~~v~~~~~aa~~VVLaaGa~~tp~LLl~SGiG~~~~l~~~gi~~~~~~p~VG~~l~dh 314 (570)
++ .++++||++.+.+| +.++++ ++|+||||||+|+||+|||+|||||+++|+++||+++.|+|.||+|||||
T Consensus 241 ~g---~~rA~GVe~~~~~g~~~~~v~----A~kEVILsAGai~SPqlL~lSGIGp~~~L~~~gI~vv~dlPgVG~NLqDH 313 (566)
T 3fim_B 241 NG---LPAFRCVEYAEQEGAPTTTVC----AKKEVVLSAGSVGTPILLQLSGIGDENDLSSVGIDTIVNNPSVGRNLSDH 313 (566)
T ss_dssp TT---EEECCEEEEESSTTSCCEEEE----EEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCC
T ss_pred CC---CCEEEEEEEEECCCceEEEEE----eeeEEEEecCCcCChHHHHhcCCCChHHHhhcCCCceecCcchhhhhhcC
Confidence 22 12999999996556 777777 67999999999999999999999999999999999999999999999999
Q ss_pred CCceeeeccCCcccch-h-hhh-hcccchhhhHhhhcCCccCcC-----ccccccccccccccccC-CCCCCChHHHHHH
Q 008331 315 PMNALFVPSARPVEVS-L-VQV-VGITRFDSYIETASGLSLAPS-----WAQGLTRDYSSFLNKTD-IPSLVTPETVAEA 385 (570)
Q Consensus 315 ~~~~~~~~~~~~~~~~-~-~~~-~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 385 (570)
+.+.+.+..+.+.... . ... ........|.....|+..... +.+. ......+..... .+....++... +
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~~f~~~-~~~~~~~~~~~~~~~~~~~pd~~~-~ 391 (566)
T 3fim_B 314 LLLPAAFFVNSNQTFDNIFRDSSEFNVDLDQWTNTRTGPLTALIANHLAWLRL-PSNSSIFQTFPDPAAGPNSAHWET-I 391 (566)
T ss_dssp EEECCEEEESCSCSSGGGGTCHHHHHHHHHHHHHHSCSGGGCCSCSEEEEECC-CTTCGGGGTSCCCSSSTTSCSEEE-E
T ss_pred ccceEEEEeCCCcccchhhcChHHHHHHHHHHHhcCCCCcccChhhheeeecc-ccchhhhhhhccccccCCCCCEEE-E
Confidence 9877766554332111 0 000 000111234444444321110 0000 000000000000 00000111100 0
Q ss_pred hHh--hh-cc-CCCceeeEEEEeecccccccEEEEecCCCCCCCCeeecCCCCCHhHHHHHHHHHHHHHHHHcCcccccc
Q 008331 386 VET--VN-SY-LNGTIRAGVIVEKIMGPRSTGHLRLRTLDADDNPSVTFNYFQEPEDLVRCVQGMRTIIDVLNSRALSKF 461 (570)
Q Consensus 386 ~~~--~~-~~-~~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~ 461 (570)
+.. .. .. .......+++...+.+|.|||+|+|+++||.+.|.|+++|+.++.|++.+.++++.+++++++++++.+
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrG~V~L~s~dp~~~P~i~~~yl~~~~D~~~~~~~~~~~~~i~~~~~~~~~ 471 (566)
T 3fim_B 392 FSNQWFHPAIPRPDTGSFMSVTNALISPVARGDIKLATSNPFDKPLINPQYLSTEFDIFTMIQAVKSNLRFLSGQAWADF 471 (566)
T ss_dssp EESSCCCTTSCCCSSCCEEEEEEEESSCSCCBEEECSSSCTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTSGGGTTT
T ss_pred ecccchhhcccCCCCCCEEEEEEeecCCccceEEEecCCCCCCCceeccccCCCccHHHHHHHHHHHHHHHHhCcccCCc
Confidence 000 00 00 001122445666788999999999999999999999999999999999999999999999999888877
Q ss_pred cCCCcchhHHhhhhccCCCCCCCC-CCCCCHHHHHHHHHhcccccccccccccCC------cccCCCCeEeccCCceEee
Q 008331 462 RYPDVSVQELIDLMVNIPTNLRPR-HVVGASISLEQFCRDTVMTIWHYHGGCQVD------RVVDRDYKVLGVDGLRVID 534 (570)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~i~~~~~~~~~~~~H~~GTc~MG------~VVD~~~rv~g~~nL~V~D 534 (570)
...+ ..|+ ...++|++|++|+|+...+.+|++|||||| +|||++|||||++||||||
T Consensus 472 ~~~~----------------~~P~~~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~~VVD~~lrV~Gv~~LrVvD 535 (566)
T 3fim_B 472 VIRP----------------FDPRLRDPTDDAAIESYIRDNANTIFHPVGTASMSPRGASWGVVDPDLKVKGVDGLRIVD 535 (566)
T ss_dssp EEEE----------------SSGGGSCTTCHHHHHHHHHHHCEECSCCBCTTCBCCTTCSSCSBCTTCBBTTCBSEEECS
T ss_pred cccc----------------cCCCcccccchHHHHHHHhhcccccccccCccccCCcccCCccCCCCCeEccCCCcEEcc
Confidence 6444 4566 557899999999999999999999999998 7999999999999999999
Q ss_pred ccCCCCCCCCchHHHHHHHHHHHHHHhhccc
Q 008331 535 GSTFYNSPGTNPQATCMMLGRYMGLRILQDR 565 (570)
Q Consensus 535 aSv~P~~~~~NP~lTi~Ala~r~a~~i~~~~ 565 (570)
+||||+.+++||++|+||||||+||.|++++
T Consensus 536 aSv~P~~~~~n~~~~~~~iaekaAd~I~~~~ 566 (566)
T 3fim_B 536 GSILPFAPNAHTQGPIYLVGKQGADLIKADQ 566 (566)
T ss_dssp GGGCCSCCSSCTHHHHHHHHHHHHHHHHHTC
T ss_pred cccCCCCCCcCcHHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999988753
No 2
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=100.00 E-value=1.1e-78 Score=656.03 Aligned_cols=505 Identities=41% Similarity=0.734 Sum_probs=382.1
Q ss_pred CcceeeecccCCCCCCcccEEEECCCCchhHHHHhhhccCeEEEEccCCCCCCCCCcccccccccccCCCC-CCCCCccc
Q 008331 25 PYYTFVKDATSAPLISYYDYIIVGGGTSGCPLAATLSQNATVLLLEKGGSPYENPNITDTGNFATTLLDPS-PTSPSQQF 103 (570)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~DvIIVGsG~aG~~~A~~La~g~~VlvLE~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 103 (570)
+.++|+.++.......+|||||||||+||+++|.+|+||.+|||||+|+....++....+..+...+.++. |.+.++..
T Consensus 10 ~~~~~~~~~~~~~~~~~yD~IIVGsG~AG~v~A~rLseg~~VlvLEaG~~~~~~~~~~~~~~~~~~~~~~~~~~t~~q~~ 89 (536)
T 1ju2_A 10 SYLSFAYDATDLELEGSYDYVIVGGGTSGCPLAATLSEKYKVLVLERGSLPTAYPNVLTADGFVYNLQQEDDGKTPVERF 89 (536)
T ss_dssp GGGGGEEEGGGSCSEEEEEEEEECCSTTHHHHHHHHTTTSCEEEECSSBCGGGSGGGGBGGGHHHHHHSCCCSSSSEEEE
T ss_pred ccCccccCcccccccCcccEEEECccHHHHHHHHHHhcCCcEEEEecCCCcCCCcceecchhHhhhccCCCcCcCCCccc
Confidence 45677887777666778999999999999999999999999999999986533343344433433222111 45556666
Q ss_pred ccCCcccccCCceeccccccCceeeeCCChhhhhhCC--CChhhhhhhhHHHHhhccCCCCCcchHHHHHHHHHHcCCCC
Q 008331 104 ISEDGVYNARARVLGGGSVINAGFYTRASLRYVREVG--WTESLVNSSYEWVEKKVAHEPPMLQWQSAVRDGLLEAGVLP 181 (570)
Q Consensus 104 ~~~~~~~~~~g~~lGG~s~~~~~~~~r~~~~~~~~~g--w~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 181 (570)
..++.+.+.+|++|||+|.+|+++|.|+.+.+++..| |+++++++||+++|+.+.+.+...++...+.+++.++|+.+
T Consensus 90 ~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~d~~~~G~~W~~~~~~p~~~~~e~~~~~~~~~~~~~~~~~~a~~~~G~~~ 169 (536)
T 1ju2_A 90 VSEDGIDNVRGRVLGGTSIINAGVYARANTSIYSASGVDWDMDLVNQTYEWVEDTIVYKPNSQSWQSVTKTAFLEAGVHP 169 (536)
T ss_dssp ECTTSCEEEEECBTTGGGGTSCCEECBCCTTSSTTSSSCCCHHHHHHHHHHHHHHHCBCCCCCHHHHHHHHHHHHTTCCC
T ss_pred cCCCcceeecceeccccccccCeEEEeCCHHHHhhccCCCChHHHHHHHHhhhcccCCCCCCCcHHHHHHHHHHHcCCCC
Confidence 6777888899999999999999999999998877777 99999999999999988777777788888999999999866
Q ss_pred CCCCCcCCCCcceeeeeEECCCCccccHHHhhhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEe
Q 008331 182 YNGFTFDHIYGTKVSGTIFDEDGHRHSAADLLEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACL 261 (570)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~ 261 (570)
.++...+...++..+.+.++.+|.|+++..|++.+++.|++|+++++|++|+++++ ++.+++||++.+.+|+.+++++
T Consensus 170 ~~~~~~~~~~g~~~g~~~~~~~g~r~s~~~~~~~~~~~~~~v~~~~~v~~i~~~~~--~~~~~~GV~~~~~~g~~~~~~v 247 (536)
T 1ju2_A 170 NHGFSLDHEEGTRITGSTFDNKGTRHAADELLNKGNSNNLRVGVHASVEKIIFSNA--PGLTATGVIYRDSNGTPHQAFV 247 (536)
T ss_dssp EEEECCBCCSEEEECEESBCTTSBBCCGGGGGGGSCTTTEEEEESCEEEEEEECCS--SSCBEEEEEEECTTSCEEEEEE
T ss_pred CCCcccCCCCCceeeeEEECCCCeEecHHHhhhhhcCCCcEEEeCCEEEEEEECCC--CCCEEEEEEEEeCCCceEEEEe
Confidence 55443444444444444445678888877788878889999999999999999863 1238999999876777655532
Q ss_pred cCCCCceEEEcCCccccHHHHHHhCCCChhhhhhcCCcccccCCccCcccccCCCceeeeccCCcccchhhhhhcccchh
Q 008331 262 NNGGKNEIILSAGAIGSPQLLMLSGVGPANELRKRGIRVVVDQPNVGQGMSDNPMNALFVPSARPVEVSLVQVVGITRFD 341 (570)
Q Consensus 262 ~~~aa~~VVLaaGa~~tp~LLl~SGiG~~~~l~~~gi~~~~~~p~VG~~l~dh~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (570)
+ ++|+||||||+|+||+||++|||||+++|+++||+++.++|.||+|||||+...+.+..+.+......+...+..
T Consensus 248 ~--a~k~VILaaGa~~sp~lL~~SGig~~~~l~~~gi~~~~dlP~VG~NL~DH~~~~~~~~~~~~~~~~~~~~~~~~~-- 323 (536)
T 1ju2_A 248 R--SKGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQFLHDNPRNFINILPPNPIEPTIVTVLGISN-- 323 (536)
T ss_dssp E--EEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTEEEECCEEEEEEECCSSCCCCCCCCEEEECS--
T ss_pred c--cCCEEEEcCcccCCHHHHHHcCCCCHHHHHhcCCceEecCcccccchhcCcceeEEEEeCCCcccccchhhhHHH--
Confidence 2 479999999999999999999999999999999999999999999999999887777665443211111011100
Q ss_pred hhHhhhcCCccCcCccccccccccccccccCCCCCCChHHHHHHhHhhhccCCCceeeEEEEeecccccccEEEEe-cCC
Q 008331 342 SYIETASGLSLAPSWAQGLTRDYSSFLNKTDIPSLVTPETVAEAVETVNSYLNGTIRAGVIVEKIMGPRSTGHLRL-RTL 420 (570)
Q Consensus 342 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l-~~~ 420 (570)
.|.....|. +... ...... ++... ...+. ..+..+.+.+++|.|||+|+| +++
T Consensus 324 ~~~~~~~g~-~~~~-----~~~~~~-----~~~~~-------------~~~~~--~~~~~~~~~l~~P~SrG~V~L~~s~ 377 (536)
T 1ju2_A 324 DFYQCSFSS-LPFT-----TPPFGF-----FPSSS-------------YPLPN--STFAHFASKVAGPLSYGSLTLKSSS 377 (536)
T ss_dssp SEEEEEEEE-CCCS-----SCCBTT-----BSSSC-------------CCCCS--SCEEEEEEEESSCSCCEEEECSCSS
T ss_pred HHHHcCCCC-CCCC-----hhhhee-----ecCcc-------------cCCCC--cceEEEeeecCCCCcceEEEeCCCC
Confidence 121111111 0000 000000 01000 01111 112345567789999999999 889
Q ss_pred CCCCCCeeecCCCCCHhHHHHHHHHHHHHHHHHcCcccccccCCCc-chhHHhhhhccCCCCCCCCCCCCCHHHHHHHHH
Q 008331 421 DADDNPSVTFNYFQEPEDLVRCVQGMRTIIDVLNSRALSKFRYPDV-SVQELIDLMVNIPTNLRPRHVVGASISLEQFCR 499 (570)
Q Consensus 421 d~~~~p~i~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~ 499 (570)
||.+.|.|+++|+.++.|++.+.++++.+++++++.+++.+...+. ..+.+.+... ..|+. .++++++++|++
T Consensus 378 Dp~~~P~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~-----~~p~~-~~~d~~~~~~ir 451 (536)
T 1ju2_A 378 NVRVSPNVKFNYYSNLTDLSHCVSGMKKIGELLSTDALKPYKVEDLPGVEGFNILGI-----PLPKD-QTDDAAFETFCR 451 (536)
T ss_dssp CTTSCCEECCCTTCSHHHHHHHHHHHHHHHHHHTSGGGGGGCSSCCSTTCSCCBSSS-----CCCSC-TTCHHHHHHHHH
T ss_pred CcccCceecccccCCccHHHHHHHHHHHHHHHHcCccchhhhccccccCCCcccccc-----CCCcc-cCCHHHHHHHHH
Confidence 9999999999999999999999999999999999988887764431 0000000000 02322 468999999999
Q ss_pred hcccccccccccccCCcccCCCCeEeccCCceEeeccCCCCCCCCchHHHHHHHHHHHHHHhhccccC
Q 008331 500 DTVMTIWHYHGGCQVDRVVDRDYKVLGVDGLRVIDGSTFYNSPGTNPQATCMMLGRYMGLRILQDRDR 567 (570)
Q Consensus 500 ~~~~~~~H~~GTc~MG~VVD~~~rv~g~~nL~V~DaSv~P~~~~~NP~lTi~Ala~r~a~~i~~~~~~ 567 (570)
....+.+|++||||||+|||++|||||++||||||+||||+.+++||++|+||||||+|++|++++|+
T Consensus 452 ~~~~t~~H~~GTcrMG~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~t~~aiAer~A~~ii~~~~~ 519 (536)
T 1ju2_A 452 ESVASYWHYHGGCLVGKVLDGDFRVTGINALRVVDGSTFPYTPASHPQGFYLMLGRYVGIKILQERSA 519 (536)
T ss_dssp HHCEECSCCEESSCBTTTBCTTSBBTTCBTEEECSGGGCSSCSSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccCccccCcCccCCccEECCCCeEcCCCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999988774
No 3
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=100.00 E-value=1.4e-78 Score=654.79 Aligned_cols=489 Identities=23% Similarity=0.294 Sum_probs=352.3
Q ss_pred CCcccEEEECCCCchhHHHHhhhc--cCeEEEEccCCCCC-CCCCccccccccccc---CCCCCCCCCcccccCCccccc
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ--NATVLLLEKGGSPY-ENPNITDTGNFATTL---LDPSPTSPSQQFISEDGVYNA 112 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~--g~~VlvLE~G~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 112 (570)
+++|||||||+|.|||++|.||+| +.+|||||+|+... .++....+..+...+ .+|.|.+.++. ..++.+.++
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~~q~-~~~r~~~~~ 95 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDHAYETVELA-TNNQTALIR 95 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSCCCTTSCHHHHBGGGTTTTTTSTTBCCEECCCCT-TTSCCCEEC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCcceechhhHHhhcCCcccCCccccccC-CCCCeeecc
Confidence 568999999999999999999998 79999999998432 234444454444332 36777777765 577788999
Q ss_pred CCceeccccccCceeeeCCChhhhhh------C-CCChhhhhhhhHHHHhhcc---------------CC----------
Q 008331 113 RARVLGGGSVINAGFYTRASLRYVRE------V-GWTESLVNSSYEWVEKKVA---------------HE---------- 160 (570)
Q Consensus 113 ~g~~lGG~s~~~~~~~~r~~~~~~~~------~-gw~~~~l~~~~~~~~~~~~---------------~~---------- 160 (570)
|||+|||+|.+|+|+|.|+.+.+++. . +|+|+++.+||++.|.... ++
T Consensus 96 rGk~LGGsS~iN~m~y~Rg~~~Dyd~W~~~g~~~gW~~~~~lpyf~k~E~~~~~~~~~~~~~~~~~~~~hG~~Gpl~v~~ 175 (583)
T 3qvp_A 96 SGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGTVHAGP 175 (583)
T ss_dssp CBCSTTGGGGTSCCBCCCCCHHHHHHHHHTSCCTTCSHHHHHHHHHHHEEECCCCHHHHHHTCCCCGGGSCSSSSEEEBC
T ss_pred CceecCCcCcccceEEEeCCHHHHHHHHHhCCCCCCChhHHHHHHHHHHhccCCcchhhcccccCCccccCCCCCEEecC
Confidence 99999999999999999999865442 4 8999999999999987531 00
Q ss_pred C----CCcchHHHHHHHHHHcCCCCCCCCCcCCCCcceeeeeEECCCCccccHHH-hh-hhcCCCCeEEEecceEEEEEe
Q 008331 161 P----PMLQWQSAVRDGLLEAGVLPYNGFTFDHIYGTKVSGTIFDEDGHRHSAAD-LL-EYADPEKLTVYLRAVVQRIKF 234 (570)
Q Consensus 161 ~----~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~-~l-~~~~~~g~~i~~~~~V~~i~~ 234 (570)
+ ...++...+.++++++|++...++......|+.........+|.|+++.. |+ +..+++|++|++++.|+||++
T Consensus 176 ~~~~~~~~~~~~~~~~a~~~~G~~~~~D~n~~~~~G~~~~~~t~~~~g~R~saa~ayL~p~~~r~NL~V~t~a~V~rIl~ 255 (583)
T 3qvp_A 176 RDTGDDYSPIVKALMSAVEDRGVPTKKDFGCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNLQVLTGQYVGKVLL 255 (583)
T ss_dssp CCCSSCBCTHHHHHHHHHHTTTCCBCCCTTSSCCCEEECCCBSBCTTCBBCCHHHHHTTTTTTCTTEEEECSCEEEEEEE
T ss_pred CCCcccCCHHHHHHHHHHHHcCCCcCCCCCCCCCceecccceeEcCCCcEecHHHHHHHHhhcCCCcEEEcCCEEEEEEe
Confidence 1 12456678889999999864332221111222211122224678887765 66 466789999999999999999
Q ss_pred cCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCccccHHHHHHhCCCChhhhhhcCCcccccCCccCcccccC
Q 008331 235 TETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIGSPQLLMLSGVGPANELRKRGIRVVVDQPNVGQGMSDN 314 (570)
Q Consensus 235 ~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl~SGiG~~~~l~~~gi~~~~~~p~VG~~l~dh 314 (570)
++.+ .+.+++||++.+.+|+.++++ ++|+||||||+|+||+|||+|||||+++|+++||+++.|+| ||+|||||
T Consensus 256 d~~~-~~~ra~GV~~~~~~G~~~~v~----A~kEVILsAGa~~SPqLL~lSGIGp~~~L~~~GI~vv~dLP-VG~NLqDH 329 (583)
T 3qvp_A 256 SQNG-TTPRAVGVEFGTHKGNTHNVY----AKHEVLLAAGSAVSPTILEYSGIGMKSILEPLGIDTVVDLP-VGLNLQDQ 329 (583)
T ss_dssp ECSS-SSCEEEEEEEESSTTCEEEEE----EEEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCCCSBCCC-TTCCBBCC
T ss_pred ccCC-CCCEEEEEEEEecCCcEEEEE----ECCEEEEeCCccCCHHHHHHcCCCCHHHHHhCCCCceeeCc-cccchhhC
Confidence 8421 123999999986688888887 77899999999999999999999999999999999999999 99999999
Q ss_pred CCceeeeccCCccc--------chhhhhhccc--chhhhHhhhcCCccCcCccccccccccccccccCCCCCCChHHHHH
Q 008331 315 PMNALFVPSARPVE--------VSLVQVVGIT--RFDSYIETASGLSLAPSWAQGLTRDYSSFLNKTDIPSLVTPETVAE 384 (570)
Q Consensus 315 ~~~~~~~~~~~~~~--------~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (570)
+.+.+.+....+.. .++...++.. ....|.....+. |... ....+.+ .........
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~--------~~~~~~~~~ 395 (583)
T 3qvp_A 330 TTATVRSRITSAGAGQGQAAWFATFNETFGDYSEKAHELLNTKLEQ-----WAEE-AVARGGF--------HNTTALLIQ 395 (583)
T ss_dssp EEEEEEEEECGGGCSBCEEEEEEEHHHHHGGGHHHHHHHHHHCHHH-----HHHH-HHHTTSC--------SCHHHHHHH
T ss_pred ccceEEEEecCCccccccccccccHHHhhccchHHHHHHHHhhcch-----hhcc-cccccCc--------cccHHHHhh
Confidence 98887776543210 0111110000 000011100000 0000 0000000 000111111
Q ss_pred HhHh---h--hccCC-Cc----eeeEEEEeecccccccEEEEecCCCCCCCCee-ecCCCCCHhHHHHHHHHHHHHHHHH
Q 008331 385 AVET---V--NSYLN-GT----IRAGVIVEKIMGPRSTGHLRLRTLDADDNPSV-TFNYFQEPEDLVRCVQGMRTIIDVL 453 (570)
Q Consensus 385 ~~~~---~--~~~~~-~~----~~~~~~~~~~~~p~s~g~v~l~~~d~~~~p~i-~~~~~~~~~D~~~~~~~~~~~~~i~ 453 (570)
+... . ...+. .. .....+.....+|.|||+|+|+++||.+.|.| +++|+.++.|++.+.++++.+++++
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~SrG~v~l~s~dp~~~P~i~~~~yl~~~~D~~~~~~~~~~~~~i~ 475 (583)
T 3qvp_A 396 YENYRDWIVNHNVAYSELFLDTAGVASFDVWDLLPFTRGYVHILDKDPYLHHFAYDPQYFLNELDLLGQAAATQLARNIS 475 (583)
T ss_dssp HHHHHHHHHHSCCEEEEEEEECTTSEEEEEEESSCCCCBEEEESSSCGGGCCEEEECCTTCSHHHHHHHHHHHHHHHHHH
T ss_pred hccchhhhccCCCCcceeeeccCCCceeeeeecccCCceEEEecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 1000 0 00000 00 00112223347899999999999999999999 9999999999999999999999999
Q ss_pred cCcccccccCCCcchhHHhhhhccCCCCCCCCCC---CCCHHHHHHHHHhcccccccccccccCC-----cccCCCCeEe
Q 008331 454 NSRALSKFRYPDVSVQELIDLMVNIPTNLRPRHV---VGASISLEQFCRDTVMTIWHYHGGCQVD-----RVVDRDYKVL 525 (570)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~---~~~~~~i~~~~~~~~~~~~H~~GTc~MG-----~VVD~~~rv~ 525 (570)
++.+++.+...+ ..|+.. .++|++|++|+|....+.+|++|||||| +|||++||||
T Consensus 476 ~~~~~~~~~~~~----------------~~pg~~~~~~~sd~~~~~~~r~~~~t~~H~~GTc~Mg~~~~~~VVD~~lrV~ 539 (583)
T 3qvp_A 476 NSGAMQTYFAGE----------------TIPGDNLAYDADLSAWTEYIPYHFRPNYHGVGTCSMMPKEMGGVVDNAARVY 539 (583)
T ss_dssp TSTTHHHHEEEE----------------EESGGGSCTTCCHHHHHHHGGGSCEECSCCBCTTCBSCGGGTCSBCTTCBBT
T ss_pred hCcchhhccccc----------------cCCCcccccCCCHHHHHHHHHhccCCCcCCCCceeCCCCCCCceECCCCeEe
Confidence 988777665333 234432 3689999999999999999999999999 7999999999
Q ss_pred ccCCceEeeccCCCCCCCCchHHHHHHHHHHHHHHhhcc
Q 008331 526 GVDGLRVIDGSTFYNSPGTNPQATCMMLGRYMGLRILQD 564 (570)
Q Consensus 526 g~~nL~V~DaSv~P~~~~~NP~lTi~Ala~r~a~~i~~~ 564 (570)
|++||||||+||||+.+++||++|+||||||+||+|+++
T Consensus 540 Gv~~LrVvDaSv~P~~~~~n~~~t~~aiaeraAd~I~~~ 578 (583)
T 3qvp_A 540 GVQGLRVIDGSIPPTQMSSHVMTVFYAMALKISDAILED 578 (583)
T ss_dssp TCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHH
T ss_pred cCCCeEEeecccCCCCCCcCcHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999988764
No 4
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=100.00 E-value=3.8e-76 Score=636.68 Aligned_cols=492 Identities=21% Similarity=0.268 Sum_probs=350.0
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-c-CeEEEEccCCCC-CCCCCccccccccccc---CCCCCCCCCcccccCCccc--
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-N-ATVLLLEKGGSP-YENPNITDTGNFATTL---LDPSPTSPSQQFISEDGVY-- 110 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g-~~VlvLE~G~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-- 110 (570)
.++|||||||+|.|||++|.||+| + .+|||||+|+.. ...+....|..+.... .+|.|.+. +.++...
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~~~~~~~~i~~P~~~~~~~~~~~dW~y~t~----~~~r~~~~~ 79 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIGNPEDIPEITTPSSAMDLRNSKYDWAYKTT----MVRRDDYER 79 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCSCGGGCHHHHCGGGGGGGTTSTTBCCEEEE----EEEETTEEE
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCceEECchhhhhccCCCcccceEEE----ECCcccccc
Confidence 457999999999999999999999 6 799999999863 2223333444333222 24555443 2333344
Q ss_pred ----ccCCceeccccccCceeeeCCChhhhhh------CCCChhhhhhhhHHHHhhccCC----------C---------
Q 008331 111 ----NARARVLGGGSVINAGFYTRASLRYVRE------VGWTESLVNSSYEWVEKKVAHE----------P--------- 161 (570)
Q Consensus 111 ----~~~g~~lGG~s~~~~~~~~r~~~~~~~~------~gw~~~~l~~~~~~~~~~~~~~----------~--------- 161 (570)
++|||++||+|.+|+|+|.|+.+.+++. .+|+|+++.+||++.|...... .
T Consensus 80 ~~~~~~rGkvLGGsS~iN~m~~~rg~~~dyd~W~~~G~~gW~~~~~lpyf~k~e~~~~~~~~~~~~~~~hG~~Gpl~v~~ 159 (577)
T 3q9t_A 80 IEKPNTRGKTLGGSSSLNYFTWVPGHKATFDQWEEFGGKEWTWDPLVPYLRKSATYHDDPRLYSPELEKIGGGGPIPISH 159 (577)
T ss_dssp EEEEECCBCSTTGGGGTSCCEECCCCHHHHHTTHHHHCGGGSHHHHHHHHHHTEEEECTTCCSCGGGGGGCCSCSEEEEE
T ss_pred ccccccccccccCccccCceEeccCCHHHHHHHHHhCCCCCCHHHHHHHHHHHhccCCCccccCCccccCCCCCCEEeeC
Confidence 8999999999999999999999865442 6799999999999987643211 0
Q ss_pred -C----CcchHHHHHHHHHHcCCCCCCCCCcCCCCcceeeeeEECCCCccccHHHhhhhcCCCCeEEEecceEEEEEecC
Q 008331 162 -P----MLQWQSAVRDGLLEAGVLPYNGFTFDHIYGTKVSGTIFDEDGHRHSAADLLEYADPEKLTVYLRAVVQRIKFTE 236 (570)
Q Consensus 162 -~----~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~l~~~~~~g~~i~~~~~V~~i~~~~ 236 (570)
. ..++...+.+++.++|++...++......+....... ..+|.|+++..|+ ..++|++|++++.|+||++++
T Consensus 160 ~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~~~~~G~~~~~~~-~~~g~R~s~~~~l--~~r~Nl~v~~~a~v~ri~~~~ 236 (577)
T 3q9t_A 160 AELIDEMAPFRENLTKAWKSMGQPLIENIYDGEMDGLTHCCDT-IYRGQRSGSFLFV--KNKPNITIVPEVHSKRLIINE 236 (577)
T ss_dssp CCCCGGGHHHHHHHHHHHHHTTCCBCSCCSSSCCCEEEECEES-EETTEECCGGGGS--SSCTTEEEECSEEEEEEEEET
T ss_pred CCCCcccchHHHHHHHHHHHcCCCcCCCCCCCCcCeEEeecce-ecCCeEeeHHHHH--hcCCCeEEEcCcEEEEEEEeC
Confidence 0 0125566788889999864322211111121111111 1357777665443 567899999999999999984
Q ss_pred CCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCccccHHHHHHhCCCChhhhhhcCCcccccCCccCcccccCCC
Q 008331 237 TGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIGSPQLLMLSGVGPANELRKRGIRVVVDQPNVGQGMSDNPM 316 (570)
Q Consensus 237 ~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl~SGiG~~~~l~~~gi~~~~~~p~VG~~l~dh~~ 316 (570)
.+ .+++||++.+.+|+.++++ ++|+||||||+|+||+|||+|||||+++|+++||+++.|+|.||+|||||+.
T Consensus 237 ~~---~~a~GV~~~~~~g~~~~v~----A~keVILsaGa~~sp~lL~~SGIGp~~~L~~~GI~vv~dlP~VG~nl~DH~~ 309 (577)
T 3q9t_A 237 AD---RTCKGVTVVTAAGNELNFF----ADREVILSQGVFETPKLLMLSGIGPTRELSRHGINTIVDSRHVGQNLMDHPG 309 (577)
T ss_dssp TT---TEEEEEEEEETTSCEEEEE----EEEEEEECSHHHHHHHHHHHTTEECHHHHHTTTCCCSEECTTTTEEEBCCEE
T ss_pred CC---CEEEEEEEEeCCCcEEEEE----eeeEEEEcccccCChHHHHHcCCCCHHHHHHcCCCeeccCchhhhhhhcCcc
Confidence 21 2999999997668888877 6799999999999999999999999999999999999999999999999998
Q ss_pred ceeeeccCCcccch-h-h--hhhcccchhhhHhhhcCCccCcCcccccccccccccc--------------------cc-
Q 008331 317 NALFVPSARPVEVS-L-V--QVVGITRFDSYIETASGLSLAPSWAQGLTRDYSSFLN--------------------KT- 371 (570)
Q Consensus 317 ~~~~~~~~~~~~~~-~-~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------------------~~- 371 (570)
+.+.+..+.+.... . . ..........|.....|+.-. ... ...++... ..
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~Gpl~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (577)
T 3q9t_A 310 VPFVLRVKDGFGMDDVLLRHGPKRDAVVSAYNKNRSGPVGS-GLL----ELVGFPRIDKYLEKDAEYRKAKAANGGKDPF 384 (577)
T ss_dssp EEEEEEECTTSSSHHHHTSCSHHHHHHHHHHHHHSCSGGGC-CSE----EEEEECCCHHHHTTCHHHHHHHHHTTTSCSS
T ss_pred eeEEEEeCCCCccchhhhcchhHHHHHHHHHHhcCCCCccc-chh----heeEEeecChhhhcchhhhhhhhcccccccc
Confidence 88777655432110 0 0 000001122344433442111 000 00000000 00
Q ss_pred CCCCCCChHHH--HHHhHhhh-ccC-CCceeeEEEEeecccccccE-EEEecCCCCCCCCeeecCCCCCHhHHHHHHHHH
Q 008331 372 DIPSLVTPETV--AEAVETVN-SYL-NGTIRAGVIVEKIMGPRSTG-HLRLRTLDADDNPSVTFNYFQEPEDLVRCVQGM 446 (570)
Q Consensus 372 ~~~~~~~~~~~--~~~~~~~~-~~~-~~~~~~~~~~~~~~~p~s~g-~v~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~ 446 (570)
.+...+..++. ..+..... ..+ ......+++...+.+|.||| +|+|+++||.+.|.|+++|+.++.|++.+.+++
T Consensus 385 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrGG~V~L~S~dp~~~P~i~p~yl~~~~D~~~~~~~~ 464 (577)
T 3q9t_A 385 SPLGQPHFELDFVCMFGTAFQWHFPTPKTGDHLTVVVDLVRPISDPGEVTLNSADPFQQPNINLNFFANDLDIIAMREGI 464 (577)
T ss_dssp CTTSCCSEEEEEESSCCGGGCSSSCCCSSSEEEEEEEEESSCCSCCEEEECSCSCTTSCCEEECCTTCSHHHHHHHHHHH
T ss_pred CCCCCceEEEEecccccccccccccCCCCCCEEEEEEEeeeccccCCEEEeCCCCCCCCceEecCcCCCccHHHHHHHHH
Confidence 00000000000 00000000 000 01123456667788999999 999999999999999999999999999999999
Q ss_pred HHHHHHH-cCcccccccCCCcchhHHhhhhccCCCCCCCCCCCCCHHHHHHHHHhcccccccccccccCC-----cccCC
Q 008331 447 RTIIDVL-NSRALSKFRYPDVSVQELIDLMVNIPTNLRPRHVVGASISLEQFCRDTVMTIWHYHGGCQVD-----RVVDR 520 (570)
Q Consensus 447 ~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~H~~GTc~MG-----~VVD~ 520 (570)
+.+++++ ++++++.+...+ ..|+...++|++|++|+|+...+.+|++|||||| +|||+
T Consensus 465 ~~~~~i~~~~~~~~~~~~~e----------------~~p~~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~VVD~ 528 (577)
T 3q9t_A 465 RFSYDLLFKGEGFKDLVESE----------------YPWEMPLDSDKEMHRAVLDRCQTAFHPTGTARLSKNIDQGVVDP 528 (577)
T ss_dssp HHHHHHHHHSTTGGGTEEEE----------------ESSCCCTTCHHHHHHHHHHHCEECSCCBCTTCBCSSTTTCSBCT
T ss_pred HHHHHHHHhChhhhhccccc----------------cCCCCCcCCHHHHHHHHHhccccccccccceecCCCCCCceECC
Confidence 9999999 888888776544 4566667899999999999999999999999999 69999
Q ss_pred CCeEeccCCceEeeccCCCCCCCCchHHHHHHHHHHHHHHhhccc
Q 008331 521 DYKVLGVDGLRVIDGSTFYNSPGTNPQATCMMLGRYMGLRILQDR 565 (570)
Q Consensus 521 ~~rv~g~~nL~V~DaSv~P~~~~~NP~lTi~Ala~r~a~~i~~~~ 565 (570)
+|||||++||||||+||||+.+++||++|+||||||+||.|+++.
T Consensus 529 ~lrV~Gv~~LrVvDaSv~P~~~~~n~~a~~~~iaekaAd~I~~~~ 573 (577)
T 3q9t_A 529 KLKVHGIKKLRVADASVIPIIPDCRIQNSVYAVGEKCADMIKAEH 573 (577)
T ss_dssp TCBBTTCBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred CCeEeCCCCcEEeecccccCCCCCccHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999999887653
No 5
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=100.00 E-value=1.2e-73 Score=622.14 Aligned_cols=494 Identities=21% Similarity=0.248 Sum_probs=352.2
Q ss_pred CCcccEEEECCCCchhHHHHhhhc--cCeEEEEccCCCCCCCCCcc-ccccccccc---CCCCCCCCCcccccCCccccc
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ--NATVLLLEKGGSPYENPNIT-DTGNFATTL---LDPSPTSPSQQFISEDGVYNA 112 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~--g~~VlvLE~G~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 112 (570)
..+||+||||+|.+|+++|.+|++ |.+|+|||+|.....++... .|..+...+ .+|.|.+.+ .+.++.+.+.
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~p--~~~~~~~~~~ 99 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTTVDQNYLTVP--LINNRTNNIK 99 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCCTTSCHHHHCGGGTTTTTTSTTBCCEECCC--CTTSCCCEEC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCccCCCcccccChhhHhhccCCcccccccccc--CCCCceeeee
Confidence 457999999999999999999999 79999999998764333333 343332222 245554444 4566788899
Q ss_pred CCceeccccccCceeeeCCChhhhhh-------CCCChhhhhhhhHHHHhhccC-----------CC-------------
Q 008331 113 RARVLGGGSVINAGFYTRASLRYVRE-------VGWTESLVNSSYEWVEKKVAH-----------EP------------- 161 (570)
Q Consensus 113 ~g~~lGG~s~~~~~~~~r~~~~~~~~-------~gw~~~~l~~~~~~~~~~~~~-----------~~------------- 161 (570)
+|++|||+|.+|+|+|.|+.+.+++. .+|+|++++|||+++|+.... .+
T Consensus 100 rGk~lGGsS~in~~~~~R~~~~D~d~W~~~~G~~gW~~~~l~pyf~k~E~~~~~~~~~~~~G~~~~~~~~g~~Gpl~v~~ 179 (587)
T 1gpe_A 100 AGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQSGA 179 (587)
T ss_dssp CBCSTTGGGGTSCCEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEEECCCCHHHHHHTCCCCGGGCCBSSSEEEBC
T ss_pred ccccccccccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhcccCCcccccccccccCccccCCCCCEEEcc
Confidence 99999999999999999999964432 479999999999999986542 10
Q ss_pred -----CCcchHHHHHHHHHHcCCCCCCCCCcCCCCcceeeeeEECCCCccccHHH-hh-hhcCCCCeEEEecceEEEEEe
Q 008331 162 -----PMLQWQSAVRDGLLEAGVLPYNGFTFDHIYGTKVSGTIFDEDGHRHSAAD-LL-EYADPEKLTVYLRAVVQRIKF 234 (570)
Q Consensus 162 -----~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~-~l-~~~~~~g~~i~~~~~V~~i~~ 234 (570)
...+..+.+.++++++|++....+......++..+......+|.|+++.. |+ +.+++.|++|++++.|++|++
T Consensus 180 ~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~~~~~G~~~~~~~~~~~g~R~sa~~~~l~~~~~~~nl~i~~~~~v~~l~~ 259 (587)
T 1gpe_A 180 RDNGQPWSPIMKALMNTVSALGVPVQQDFLCGHPRGVSMIMNNLDENQVRVDAARAWLLPNYQRSNLEILTGQMVGKVLF 259 (587)
T ss_dssp CCCSSCBCTHHHHHHHHHHHTTCCBSCCTTSSCCCEEECCEESBCTTCCBCCHHHHHTTTTTTCTTEEEEESCEEEEEEE
T ss_pred CCCcCCCCHHHHHHHHHHHHcCCCcCCCCCCCCCCEEEecceEECCCCcccCHHHHHHHHhhcCCCcEEEcCCEEEEEEE
Confidence 12445678899999999875433322112222221111124678888765 77 466788999999999999999
Q ss_pred cCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCccccHHHHHHhCCCChhhhhhcCCcccccCCccCcccccC
Q 008331 235 TETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIGSPQLLMLSGVGPANELRKRGIRVVVDQPNVGQGMSDN 314 (570)
Q Consensus 235 ~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl~SGiG~~~~l~~~gi~~~~~~p~VG~~l~dh 314 (570)
++++ ++.+++||++.+.+|+.++++ ++|+||||||+|+||+|||+|||||+++|+++||+++.|+| ||+||+||
T Consensus 260 ~~~~-~~~~~~GV~~~~~~g~~~~v~----A~k~VILaaG~~~sp~lL~~SGIGp~~~L~~~gI~vv~dlP-VG~nL~DH 333 (587)
T 1gpe_A 260 KQTA-SGPQAVGVNFGTNKAVNFDVF----AKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVTQLLDLP-VGINMQDQ 333 (587)
T ss_dssp EEET-TEEEEEEEEEEEETTEEEEEE----EEEEEEECSCTTTHHHHHHHTTEECHHHHHHTTCCCSEECC-TTCSBBCC
T ss_pred CCCC-CCCEEEEEEEEeCCCcEEEEE----ecccEEEccCCCCCHHHHHhCCCCCHHHHHhCCCCeEEeCC-CCcchhcC
Confidence 8531 113899999986678877776 55999999999999999999999999999999999999999 99999999
Q ss_pred CCceeeeccCCcccchhhhhhccc-chhhhHhhhcCCccCcCcccccccccccccccc--CC--CCCC--ChHHHHHHhH
Q 008331 315 PMNALFVPSARPVEVSLVQVVGIT-RFDSYIETASGLSLAPSWAQGLTRDYSSFLNKT--DI--PSLV--TPETVAEAVE 387 (570)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~--~~~~~~~~~~ 387 (570)
+...+.+..+.+... ........ ....|.....|..... ......+.... .. .... .+.+.. .+.
T Consensus 334 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~G~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 405 (587)
T 1gpe_A 334 TTTTVSSRASSAGAG-QGQAVFFANFTETFGDYAPQARDLL------NTKLDQWAEETVARGGFHNVTALKVQYEN-YRN 405 (587)
T ss_dssp EEEEEEEEECGGGCS-BCEEEEEEEHHHHHGGGHHHHHHHH------HHSHHHHHHHHHHTTSCSCHHHHHHHHHH-HHH
T ss_pred cccceEEEeCCCccc-ccchHHHHHHHHHHHhCCCCCcccc------ccceeeEeecccccccccccccccccHHH-Hhh
Confidence 988877665533210 00000000 0011221111110000 00000000000 00 0000 011111 111
Q ss_pred hh-h-ccCC-C----ceeeEEEEeecccccccEEEEecCCCCCCCC-eeecCCCCCHhHHHHHHHHHHHHHHHHcCcccc
Q 008331 388 TV-N-SYLN-G----TIRAGVIVEKIMGPRSTGHLRLRTLDADDNP-SVTFNYFQEPEDLVRCVQGMRTIIDVLNSRALS 459 (570)
Q Consensus 388 ~~-~-~~~~-~----~~~~~~~~~~~~~p~s~g~v~l~~~d~~~~p-~i~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~ 459 (570)
.. . ..+. . ....+.+...+.+|.|||+|+|+++|+++.| .|+++|+.++.|++.++++++.+++++++.+++
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~ 485 (587)
T 1gpe_A 406 WLLDEDVAFAELFMDTEGKINFDLWDLIPFTRGSVHILSSDPYLWQFANDPKFFLNEFDLLGQAAASKLARDLTSQGAMK 485 (587)
T ss_dssp HHHHSCCEEEEEEEECTTEEEEEEEESSCCCCBEEEESSSCGGGTCEEEECCTTSSHHHHHHHHHHHHHHHHHHTSTTHH
T ss_pred hccCCCCcceeeeecCCCcEEEEEEecCCccceeEEeCCCCcccCccEeecccCCChHHHHHHHHHHHHHHHHHcCcchh
Confidence 00 0 0100 0 0012344556778999999999999999999 999999999999999999999999999998877
Q ss_pred cccCCCcchhHHhhhhccCCCCCCCCCCC---CCHHHHHHHHHhcccccccccccccCC-----cccCCCCeEeccCCce
Q 008331 460 KFRYPDVSVQELIDLMVNIPTNLRPRHVV---GASISLEQFCRDTVMTIWHYHGGCQVD-----RVVDRDYKVLGVDGLR 531 (570)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~---~~~~~i~~~~~~~~~~~~H~~GTc~MG-----~VVD~~~rv~g~~nL~ 531 (570)
.+...+ ..|+... +++++|++|++....+.+|++|||||| +|||++|||||++|||
T Consensus 486 ~~~~~~----------------~~pg~~~~~~~sd~~~~~~ir~~~~t~~H~~GTcrMG~~~~~sVVD~~lrV~Gv~nLr 549 (587)
T 1gpe_A 486 EYFAGE----------------TLPGYNLVQNATLSQWSDYVLQNFRPNWHAVSSCSMMSRELGGVVDATAKVYGTQGLR 549 (587)
T ss_dssp HHEEEE----------------EESGGGSCTTCCHHHHHHHHHHSCEECSCCBCTTCBSCGGGTCSBCTTCBBTTCBSEE
T ss_pred hhcccc----------------cCCCccccCCCCHHHHHHHHHHhcCcccCccCccccCCCCCCceECCCCEEECCCCcE
Confidence 665332 2343323 789999999999988999999999999 5999999999999999
Q ss_pred EeeccCCCCCCCCchHHHHHHHHHHHHHHhhcc
Q 008331 532 VIDGSTFYNSPGTNPQATCMMLGRYMGLRILQD 564 (570)
Q Consensus 532 V~DaSv~P~~~~~NP~lTi~Ala~r~a~~i~~~ 564 (570)
|||+||||+.+++||++|+||||+|+||+|+++
T Consensus 550 VvDaSv~P~~~~~Np~~ti~aiAeraAd~I~~~ 582 (587)
T 1gpe_A 550 VIDGSIPPTQVSSHVMTIFYGMALKVADAILDD 582 (587)
T ss_dssp ECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHH
T ss_pred EeeeccCCCCCCcchHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999988865
No 6
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=100.00 E-value=3.4e-72 Score=608.20 Aligned_cols=470 Identities=23% Similarity=0.327 Sum_probs=345.6
Q ss_pred CCcccEEEECCCCchhHHHHhhhc--cCeEEEEccCCCCCCCCCcccccccccc---cCCCCCCCCCcccccCCcccccC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ--NATVLLLEKGGSPYENPNITDTGNFATT---LLDPSPTSPSQQFISEDGVYNAR 113 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~--g~~VlvLE~G~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 113 (570)
..+|||||||||+||+++|.||+| +.||||||+|+.... +....|..+... ..+|.|.+.++..+.++.+.+.+
T Consensus 15 ~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~~~-~~~~~p~~~~~~~~~~~dw~~~t~p~~~~~~~~~~~~r 93 (526)
T 3t37_A 15 APNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEPTD-PDIWNPAAWPALQGRSYDWDYRTEAQAGTAGRAHHWAR 93 (526)
T ss_dssp --CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCCCC-GGGGSGGGGGGTTTSTTBCCEECCCBGGGTTBCCEECC
T ss_pred CCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCCCC-cchhChhhHhhccCCccccCccccccCCCCCCeEeccC
Confidence 458999999999999999999998 689999999986432 333344433322 22577888888888889999999
Q ss_pred CceeccccccCceeeeCCChhhhhh-------CCCChhhhhhhhHHHHhhccCCC----------------CCcchHHHH
Q 008331 114 ARVLGGGSVINAGFYTRASLRYVRE-------VGWTESLVNSSYEWVEKKVAHEP----------------PMLQWQSAV 170 (570)
Q Consensus 114 g~~lGG~s~~~~~~~~r~~~~~~~~-------~gw~~~~l~~~~~~~~~~~~~~~----------------~~~~~~~~~ 170 (570)
|++|||+|.+|+++|.|+.+.+|+. .+|+|+++.+||++.|....... ...++.+.+
T Consensus 94 G~~lGGsS~in~~~~~R~~~~Dfd~w~~~~~~~~w~~~~~~pyf~~~E~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~~ 173 (526)
T 3t37_A 94 GRLIGGSSCLHAMGYMRGHPSDFQAWVDASGDRRWGWDELLPVFQAIEDHPLGGDGIHGKGGPLPIHLPADEVSPLARAF 173 (526)
T ss_dssp BCBTTGGGGTSCCBCCCCCHHHHHHHHHHHSCGGGSHHHHHHHHHHHEECTTTTSSSSCSSCSEECBCCSTTSCHHHHHH
T ss_pred ccEECcHHHHhhCEEecCCHHHHHHHHHhcCCCCCChhhhhhhhhhhhhccCCCccccCcCCCcCcccccccCCHHHHHH
Confidence 9999999999999999999965432 46999999999999997543211 124567788
Q ss_pred HHHHHHcCCCCCCCCCcCCCCcceeeeeEECCCCccccHHH-hh-h-hcCCCCeEEEecceEEEEEecCCCCCCCeEEEE
Q 008331 171 RDGLLEAGVLPYNGFTFDHIYGTKVSGTIFDEDGHRHSAAD-LL-E-YADPEKLTVYLRAVVQRIKFTETGRAKPTAHCV 247 (570)
Q Consensus 171 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~-~l-~-~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV 247 (570)
.++...+|++...........++...... ...|.|.+... ++ + ...+.|++|++++.|++|+++++ +++||
T Consensus 174 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~g~r~s~~~~~~~~~~~~r~nl~v~~~~~v~~i~~~~~-----~a~gv 247 (526)
T 3t37_A 174 IEAGASLGLPRLEGHNSGEMIGVTPNSLN-IRDGRRVTAADAWLTKAVRGRKNLTILTGSRVRRLKLEGN-----QVRSL 247 (526)
T ss_dssp HHHHHHTTCCBCSSSCSSCCBSBCCCCBC-EETTEECCHHHHHSCHHHHTCTTEEEECSCEEEEEEEETT-----EEEEE
T ss_pred HHHHHHcCCCcccCCCCCccccccccccc-ccCCcccccccccccccccCCCCeEEEeCCEEEEEEecCC-----eEEEE
Confidence 89999999865433222221222111111 13566666544 44 3 45688999999999999999887 99999
Q ss_pred EEEecCCceEEEEecCCCCceEEEcCCccccHHHHHHhCCCChhhhhhcCCcccccCCccCcccccCCCceeeec-cCCc
Q 008331 248 TFYDHVGARHRACLNNGGKNEIILSAGAIGSPQLLMLSGVGPANELRKRGIRVVVDQPNVGQGMSDNPMNALFVP-SARP 326 (570)
Q Consensus 248 ~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl~SGiG~~~~l~~~gi~~~~~~p~VG~~l~dh~~~~~~~~-~~~~ 326 (570)
++.+ +++...+. +|+||||||+|+||+|||+|||||+++|+++||+++.++|.||+||+||+.....+. ...+
T Consensus 248 ~~~~-~~~~~~~~-----a~~VILsAGai~SP~LLl~SGig~~~~l~~~gi~vv~dlp~VG~nl~DH~~~~~~~~~~~~~ 321 (526)
T 3t37_A 248 EVVG-RQGSAEVF-----ADQIVLCAGALESPALLMRSGIGPHDVLDAAGVGCLIDMPDIGRNLQDHLLGAGNLYAARKP 321 (526)
T ss_dssp EEEE-TTEEEEEE-----EEEEEECSHHHHHHHHHHHTTEECHHHHHHHTCCCSEECTTTTCSBBCCEEEEEEEEEESSC
T ss_pred EEEe-cCceEEEe-----ecceEEcccccCCcchhhhccCCchhhhhccCCCeEecCCccccccccccccceeEEeccCC
Confidence 9986 44445553 799999999999999999999999999999999999999999999999986544332 2222
Q ss_pred ccchhhhhhcccchhhhHhhhcCCccCcCccccccccccccccccCCCCCCChHHHHHHhHhhhccC-CCceeeEEEEee
Q 008331 327 VEVSLVQVVGITRFDSYIETASGLSLAPSWAQGLTRDYSSFLNKTDIPSLVTPETVAEAVETVNSYL-NGTIRAGVIVEK 405 (570)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 405 (570)
....... ......|... .. +.......+...++.. +... ..++ ......+.+...
T Consensus 322 ~~~~~~~---~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~-----~~~~-------------~~~~~~~~~~~~~~~~~ 377 (526)
T 3t37_A 322 VPPSRLQ---HSESMAYMRA--DS-FTAAGQPEIVVGCGVA-----PIVS-------------ESFPAPAAGSAYSLLFG 377 (526)
T ss_dssp CCCCSSC---SEEEEEEECS--SC-SSCCSSCCEEEEEESS-----CCCC-------------TTSCCCCTTSEEEEEEE
T ss_pred cchHhhc---chhhhhhhhc--cc-ccccCCcceeeecccc-----cccc-------------cccccccCCcceeeecc
Confidence 1100000 0000011100 00 0000000000000000 0000 0000 011123445566
Q ss_pred cccccccEEEEecCCCCCCCCeeecCCCCCHhHHHHHHHHHHHHHHHHcCcccccccCCCcchhHHhhhhccCCCCCCCC
Q 008331 406 IMGPRSTGHLRLRTLDADDNPSVTFNYFQEPEDLVRCVQGMRTIIDVLNSRALSKFRYPDVSVQELIDLMVNIPTNLRPR 485 (570)
Q Consensus 406 ~~~p~s~g~v~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 485 (570)
+.+|.|||+|+++++|+.+.|.|+++|+.++.|.+.++++++.+++++.+..+..+...+ ..|+
T Consensus 378 l~~p~srG~v~~~s~dp~~~p~i~~~~~~~~~d~~~~~~~~~~~r~i~~~~~~~~~~~~~----------------~~pg 441 (526)
T 3t37_A 378 ITHPTSRGSVRISGPELGDRLIIDPAYLQTGRDRERFRRALEASRTIGHRDELAGWRERE----------------LLPG 441 (526)
T ss_dssp ESSCCCCBEEECSSSSTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTCGGGTTTEEEE----------------CSSC
T ss_pred ccCccccCcceeccCCCccCceeccccCCCHHHHHHHHHHHHHHHHHHcChhhhhccccc----------------cCCC
Confidence 789999999999999999999999999999999999999999999999988777766544 5666
Q ss_pred CCCCCHHHHHHHHHhcccccccccccccCC----cccCCCCeEeccCCceEeeccCCCCCCCCchHHHHHHHHHHHHHHh
Q 008331 486 HVVGASISLEQFCRDTVMTIWHYHGGCQVD----RVVDRDYKVLGVDGLRVIDGSTFYNSPGTNPQATCMMLGRYMGLRI 561 (570)
Q Consensus 486 ~~~~~~~~i~~~~~~~~~~~~H~~GTc~MG----~VVD~~~rv~g~~nL~V~DaSv~P~~~~~NP~lTi~Ala~r~a~~i 561 (570)
. ..+++++++|++....+.+|++|||||| +|||++|||||++|||||||||||+++++||++||||||||+||+-
T Consensus 442 ~-~~~~~~~~~~ir~~~~t~~H~~GTcrMG~d~~sVVD~~~rV~Gv~nL~VvDaSv~P~~~~~np~~ti~aiAEkaAd~~ 520 (526)
T 3t37_A 442 T-PNSAAEMDDFIARSVITHHHPCGTCRMGKDPDAVVDANLRLKALDNLFVVDASIMPNLTAGPIHAAVLAIAETFARQY 520 (526)
T ss_dssp C-CCSHHHHHHHHHHHEEECSCCBCTTCBCSSTTCSBCTTCBBTTCSSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHH
T ss_pred C-CCCHHHHHHHHHhcCccCcccCccccCCCCCCccCCCCCEEcCCCCeEEEEcCcccCCcChHHHHHHHHHHHHHHHHh
Confidence 5 5788999999999999999999999999 6999999999999999999999999999999999999999999986
Q ss_pred h
Q 008331 562 L 562 (570)
Q Consensus 562 ~ 562 (570)
-
T Consensus 521 ~ 521 (526)
T 3t37_A 521 H 521 (526)
T ss_dssp H
T ss_pred h
Confidence 4
No 7
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=100.00 E-value=2.9e-71 Score=599.47 Aligned_cols=477 Identities=28% Similarity=0.414 Sum_probs=348.5
Q ss_pred CcccEEEECCCCchhHHHHhhhc--cCeEEEEccCCCCCCCCCccccccccccc---CCCCCCCCCcccccCCcccccCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ--NATVLLLEKGGSPYENPNITDTGNFATTL---LDPSPTSPSQQFISEDGVYNARA 114 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~--g~~VlvLE~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g 114 (570)
.+||+||||+|.+|+++|.+|++ |.+|+|||+|...........+..+...+ .+|.|.+.++.. .++.+.+.+|
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~p~~~~~~~~~~~~w~~~~~p~~~-~~~~~~~~rG 90 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRGVPEVLQLDRWMELLESGYDWDYPIEPQEN-GNSFMRHARA 90 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTTCHHHHBGGGGGGGTTSTTBCCEEBCCCSS-SCTTCEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCCCccccChhhHHhhcCCcccccccccccCC-CCceEEeecc
Confidence 57999999999999999999999 69999999998654312222233332222 245665666665 6677889999
Q ss_pred ceeccccccCceeeeCCChhhhh---h----CCCChhhhhhhhHHHHhhcc------CC-----------CCCcchHHHH
Q 008331 115 RVLGGGSVINAGFYTRASLRYVR---E----VGWTESLVNSSYEWVEKKVA------HE-----------PPMLQWQSAV 170 (570)
Q Consensus 115 ~~lGG~s~~~~~~~~r~~~~~~~---~----~gw~~~~l~~~~~~~~~~~~------~~-----------~~~~~~~~~~ 170 (570)
++|||+|.+|++++.|+.+.+++ + .+|+|+++.|||+++|+... ++ +...+..+.+
T Consensus 91 k~lGGsS~in~~~~~R~~~~d~d~w~~~~G~~gW~~~~l~pyf~k~e~~~~~~~~~~~~g~~Gpl~v~~~~~~~~~~~~~ 170 (546)
T 2jbv_A 91 KVMGGCSSHNSCIAFWAPREDLDEWEAKYGATGWNAEAAWPLYKRLETNEDAGPDAPHHGDSGPVHLMNVPPKDPTGVAL 170 (546)
T ss_dssp CSTTGGGGTSCCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEETTCBTTBTTSCBSCSEEEEECCSCCHHHHHH
T ss_pred cccccCccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhhccCCCCccccCCCCCCEEEecCCCCCHHHHHH
Confidence 99999999999999999985332 2 47999999999999997654 11 1224556788
Q ss_pred HHHHHHcCCCCCCCCCcCC--CCcceeeeeEECCCCccccHHH-hhhhc-CCCCeEEEecceEEEEEecCCCCCCCeEEE
Q 008331 171 RDGLLEAGVLPYNGFTFDH--IYGTKVSGTIFDEDGHRHSAAD-LLEYA-DPEKLTVYLRAVVQRIKFTETGRAKPTAHC 246 (570)
Q Consensus 171 ~~~~~~~G~~~~~~~~~~~--~~~~~~~~~~~~~~g~r~~~~~-~l~~~-~~~g~~i~~~~~V~~i~~~~~~~~~~~v~G 246 (570)
.++++++|++.. .+.... ..++..+...|..+|.|+++.. |++.+ ++.|++|++++.|++|++++++ +++|
T Consensus 171 ~~a~~~~G~~~~-d~n~~~~~~~g~~~~~~~~~~~g~R~s~~~a~l~~a~~~~~~~i~~~~~V~~i~~~~~~----~~~G 245 (546)
T 2jbv_A 171 LDACEQAGIPRA-KFNTGTTVVNGANFFQINRRADGTRSSSSVSYIHPIVEQENFTLLTGLRARQLVFDADR----RCTG 245 (546)
T ss_dssp HHHHHHTTCCBC-CSSSSSCCSSEEEECEECBCTTSBBCCHHHHHTGGGTTCTTEEEECSCEEEEEEECTTS----BEEE
T ss_pred HHHHHHCCCCcc-CCCCCCcCcceEEeeeeecCCCCeEcCHHHHHHHHHhcCCCcEEEeCCEEEEEEECCCC----eEEE
Confidence 899999998654 322111 2233222222222688877654 77644 5789999999999999998733 8999
Q ss_pred EEEEecC-CceEEEEecCCCCceEEEcCCccccHHHHHHhCCCChhhhhhcCCcccccCCccCcccccCCCceeeeccCC
Q 008331 247 VTFYDHV-GARHRACLNNGGKNEIILSAGAIGSPQLLMLSGVGPANELRKRGIRVVVDQPNVGQGMSDNPMNALFVPSAR 325 (570)
Q Consensus 247 V~~~~~~-G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl~SGiG~~~~l~~~gi~~~~~~p~VG~~l~dh~~~~~~~~~~~ 325 (570)
|++.+.. |+.++++ ++|+||||||+|+||+||++|||||+++|+++||+++.++|.||+||+||+...+.+..+.
T Consensus 246 V~~~~~~~g~~~~i~----A~k~VIlaaG~~~sp~lL~~SGiG~~~~L~~~gi~~~~dlP~VG~nL~dH~~~~~~~~~~~ 321 (546)
T 2jbv_A 246 VDIVDSAFGHTHRLT----ARNEVVLSTGAIDTPKLLMLSGIGPAAHLAEHGIEVLVDSPGVGEHLQDHPEGVVQFEAKQ 321 (546)
T ss_dssp EEEESSTTSCEEEEE----EEEEEEECSHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEECCEEEEESS
T ss_pred EEEEECCCCcEEEEE----eCccEEEecCccCCchhhhhcCCCchHHHHhcCCceEeeCcchhhhhhhCccceEEEEecC
Confidence 9998532 7777776 5569999999999999999999999999999999999999999999999998877766554
Q ss_pred cccchhhhhhcccchhhhHhhhcCCccCcCccccccccccccccccCCCCCCChHHHHHHhHhhhccCCCceeeEEEEee
Q 008331 326 PVEVSLVQVVGITRFDSYIETASGLSLAPSWAQGLTRDYSSFLNKTDIPSLVTPETVAEAVETVNSYLNGTIRAGVIVEK 405 (570)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (570)
+..... ........|.....+.. .+.++..+ .+..... .... + .. . .....+.+...
T Consensus 322 ~~~~~~---~~~~~~~~f~~~~~~~~-----~p~~~~~~---~~~~~~~--~~~~----~----g~-~-~~~~~~~~~~~ 378 (546)
T 2jbv_A 322 PMVAES---TQWWEIGIFTPTEDGLD-----RPDLMMHY---GSVPFDM--NTLR----H----GY-P-TTENGFSLTPN 378 (546)
T ss_dssp CCCSCC---SSSCCEEEEECSSTTCS-----SCSEEEEE---ESSCCCT--TTGG----G----TC-C-CCSSEEEEEEE
T ss_pred CCcccc---cchhheEEEEecCCCCC-----CCceEEEe---ccccccc--cccc----c----Cc-c-CCCCeEEEEEE
Confidence 321100 00000011111000000 00000000 0000000 0000 0 00 0 01123344556
Q ss_pred cccccccEEEEecCCCCCCCCeeecCCCCCHh--HHHHHHHHHHHHHHHHcCcccccccCCCcchhHHhhhhccCCCCCC
Q 008331 406 IMGPRSTGHLRLRTLDADDNPSVTFNYFQEPE--DLVRCVQGMRTIIDVLNSRALSKFRYPDVSVQELIDLMVNIPTNLR 483 (570)
Q Consensus 406 ~~~p~s~g~v~l~~~d~~~~p~i~~~~~~~~~--D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (570)
+.+|.|||+|+|+++||++.|.|+++|+.++. |++.+.++++.+++++++.+++.+...+ ..
T Consensus 379 ~~~P~srG~V~L~s~dp~~~P~I~~~y~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~----------------~~ 442 (546)
T 2jbv_A 379 VTHARSRGTVRLRSRDFRDKPMVDPRYFTDPEGHDMRVMVAGIRKAREIAAQPAMAEWTGRE----------------LS 442 (546)
T ss_dssp ETTCCCCBEEECSSSCTTSCCEEECCTTCCTTCHHHHHHHHHHHHHHHHHTSGGGTTTEEEE----------------EE
T ss_pred EcccCcccEEEecCCCCCCCceecccccCCCchhHHHHHHHHHHHHHHHHcCcchhhccccc----------------cc
Confidence 78999999999999999999999999999999 9999999999999999998887765433 35
Q ss_pred CCCCCCCHHHHHHHHHhcccccccccccccCC------cccCCCCeEeccCCceEeeccCCCCCCCCchHHHHHHHHHHH
Q 008331 484 PRHVVGASISLEQFCRDTVMTIWHYHGGCQVD------RVVDRDYKVLGVDGLRVIDGSTFYNSPGTNPQATCMMLGRYM 557 (570)
Q Consensus 484 p~~~~~~~~~i~~~~~~~~~~~~H~~GTc~MG------~VVD~~~rv~g~~nL~V~DaSv~P~~~~~NP~lTi~Ala~r~ 557 (570)
|+...+++++|++|++....+.+|++|||||| +|||++|||||++||||||+||||+++++||++|+||||+|+
T Consensus 443 p~~~~~sd~~~~~~ir~~~~~~~H~~GTcrMG~~~d~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAera 522 (546)
T 2jbv_A 443 PGVEAQTDEELQDYIRKTHNTVYHPVGTVRMGAVEDEMSPLDPELRVKGVTGLRVADASVMPEHVTVNPNITVMMIGERC 522 (546)
T ss_dssp SCTTCCSHHHHHHHHHHHCEECSCCBCTTCBCCTTCTTCSBCTTCBBTTSBSEEECSGGGCSSCCSSCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHhcCCcccccccccccCCCCCCCceECCCCEEECCCCeEEeecccCCCCCCcchHHHHHHHHHHH
Confidence 66667899999999999988999999999999 799999999999999999999999999999999999999999
Q ss_pred HHHhhccc
Q 008331 558 GLRILQDR 565 (570)
Q Consensus 558 a~~i~~~~ 565 (570)
||+|+++.
T Consensus 523 Ad~I~~~~ 530 (546)
T 2jbv_A 523 ADLIRSAR 530 (546)
T ss_dssp HHHC----
T ss_pred HHHHHhhc
Confidence 99888653
No 8
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=100.00 E-value=8.1e-62 Score=527.96 Aligned_cols=484 Identities=21% Similarity=0.247 Sum_probs=312.1
Q ss_pred CCCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCCCCCCcccccccc--cccCCCC-------CCCCCcccccCC
Q 008331 38 LISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPYENPNITDTGNFA--TTLLDPS-------PTSPSQQFISED 107 (570)
Q Consensus 38 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~~~~~~~~~~~~~--~~~~~~~-------~~~~~~~~~~~~ 107 (570)
.+.+|||||||+|++|+++|.+|++ |.+|+|||+|+.............|. ....... ............
T Consensus 4 ~~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 83 (546)
T 1kdg_A 4 SATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIPGLFESLFTDSNPFWWCK 83 (546)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCCSGGGTCCCCCGGGGGGTCCTTTCGGGGGGGGTCSCCTTBCT
T ss_pred CCCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccccccccccceeeccchhHHHhhcCCCcccccc
Confidence 3567999999999999999999999 99999999997542100000000000 0000000 000000001112
Q ss_pred cccccCCceeccccccCceeeeCCChhhhhh-----CCCChhhhhhhhHHHHhhccCC--C------CCcchHHHHHHHH
Q 008331 108 GVYNARARVLGGGSVINAGFYTRASLRYVRE-----VGWTESLVNSSYEWVEKKVAHE--P------PMLQWQSAVRDGL 174 (570)
Q Consensus 108 ~~~~~~g~~lGG~s~~~~~~~~r~~~~~~~~-----~gw~~~~l~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~ 174 (570)
.....+|+++||+|.+|++++.|+.+.+++. .+|.+++ +||++.+...... + ...+....+.+++
T Consensus 84 ~~~~~~g~~lGGsS~in~~~~~r~~~~d~d~~~~W~~~w~~~~--p~~~k~e~~~~~~~~~~~~g~~~~~~~~~~~~~a~ 161 (546)
T 1kdg_A 84 DITVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGWPSSWTNHA--PYTSKLSSRLPSTDHPSTDGQRYLEQSFNVVSQLL 161 (546)
T ss_dssp TBSSCCBCSTTGGGGTSCCBCCCCCGGGGCGGGTCCGGGSCCH--HHHHHHHHHSCCBSCCSTTSCCCSCHHHHHHHHHH
T ss_pred ccccccceeecccccccceEEecCChHHhcCcccCccccCccc--HHHHHHHhcCCCCccCCCCCCccCCHHHHHHHHHH
Confidence 3456789999999999999999999865543 2455555 9999998754311 1 1233456778888
Q ss_pred HHcCCCCCCCC-CcC-CCCcceeeeeEECCCCccccHHH-hhhh-cCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEE
Q 008331 175 LEAGVLPYNGF-TFD-HIYGTKVSGTIFDEDGHRHSAAD-LLEY-ADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFY 250 (570)
Q Consensus 175 ~~~G~~~~~~~-~~~-~~~~~~~~~~~~~~~g~r~~~~~-~l~~-~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~ 250 (570)
+++|++..... ... ...++......+ .++.|+++.. |++. .++.|++|++++.|++|+++++ +++||++.
T Consensus 162 ~~~G~~~~~~~~~~~~~~~g~~~~~~~~-~~g~R~s~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~-----~~~gV~~~ 235 (546)
T 1kdg_A 162 KGQGYNQATINDNPNYKDHVFGYSAFDF-LNGKRAGPVATYLQTALARPNFTFKTNVMVSNVVRNGS-----QILGVQTN 235 (546)
T ss_dssp HTTTCEECCGGGSTTCCTTEEEECCBCE-ETTEECHHHHTHHHHHHTCTTEEEECSCCEEEEEEETT-----EEEEEEES
T ss_pred HHCCCCcCCccCCcCCCCcEEeeeeecc-CCCcccCHHHHHHHHHhhCCCcEEEeCCEEEEEEEeCC-----EEEEEEEE
Confidence 88887532100 000 011111111111 4677877653 7764 4567999999999999999865 99999997
Q ss_pred ec-CCce--EEEEecCCCCceEEEcCCccccHHHHHHhCCCChhhhhhc------CCccc-----ccCCccCcccccCCC
Q 008331 251 DH-VGAR--HRACLNNGGKNEIILSAGAIGSPQLLMLSGVGPANELRKR------GIRVV-----VDQPNVGQGMSDNPM 316 (570)
Q Consensus 251 ~~-~G~~--~~v~~~~~aa~~VVLaaGa~~tp~LLl~SGiG~~~~l~~~------gi~~~-----~~~p~VG~~l~dh~~ 316 (570)
+. +|+. .+++ ++|+||||||+++||+||++|||||+++|+++ ||+++ .|+| ||+||+||+.
T Consensus 236 ~~~~g~~~~~~v~----~~~~VIlaaG~~~sp~lL~~sGig~~~~L~~~gn~s~~GI~v~~~~~~~dlp-VG~nL~DH~~ 310 (546)
T 1kdg_A 236 DPTLGPNGFIPVT----PKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQNQWINLP-VGMNAQDNPS 310 (546)
T ss_dssp CTTSSGGGEEEEE----EEEEEEECSHHHHHHHHHHHTTBSCHHHHHHHHTSHHHHHHSCCGGGCBCCC-TTTTBBCCCC
T ss_pred ecCCCceeEEEEE----eCCEEEEcCChhcCHHHHHHcCCCcHHHHHHhhccccCCcccccccccccCC-cccCcccCcc
Confidence 53 4653 3344 68999999999999999999999999999999 58874 7999 9999999998
Q ss_pred ceeeeccCCc-ccchhhhhh-c--ccchhhhHhhhcCCccCcCccccccccccccccccCCCCCCChHHHHHHhH---hh
Q 008331 317 NALFVPSARP-VEVSLVQVV-G--ITRFDSYIETASGLSLAPSWAQGLTRDYSSFLNKTDIPSLVTPETVAEAVE---TV 389 (570)
Q Consensus 317 ~~~~~~~~~~-~~~~~~~~~-~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 389 (570)
..+.+..+.. ........+ . ......|.....|...... ...+++........ ........+.. ..
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 383 (546)
T 1kdg_A 311 INLVFTHPSIDAYENWADVWSNPRPADAAQYLANQSGVFAGAS------PKLNFWRAYSGSDG-FTRYAQGTVRPGAASV 383 (546)
T ss_dssp EEEEEECTTCCCGGGGTTTTTSCCHHHHHHHHHHSCSGGGSCS------CCEEEEEEEECTTS-CEEEEEEEEEESCSCC
T ss_pred eeEEEecCCcccccchhhhhcchhHHHHHHHHHcCCcccccCC------cceEEEEccCCCCc-chhhhhheeccccccc
Confidence 8776652211 000000000 0 0111233333333211100 00001000000000 00000000000 00
Q ss_pred hc-cCCCceeeEEEEeecccc-cccEEEEecCCCCCCCCeeecCCCCCHhHHHHHHHHHHHHHHHHcCcccccccCCCcc
Q 008331 390 NS-YLNGTIRAGVIVEKIMGP-RSTGHLRLRTLDADDNPSVTFNYFQEPEDLVRCVQGMRTIIDVLNSRALSKFRYPDVS 467 (570)
Q Consensus 390 ~~-~~~~~~~~~~~~~~~~~p-~s~g~v~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 467 (570)
.. .+......+.+...+.+| .|||+|+|+++| ..|.|+.+|+.++.|++.+.++++.+++++++.+...+
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~p~~srG~v~L~s~~--~~~~i~~~y~~~~~D~~~~~~~~~~~~~~~~~~~~~~~------ 455 (546)
T 1kdg_A 384 NSSLPYNASQIFTITVYLSTGIQSRGRIGIDAAL--RGTVLTPPWLVNPVDKTVLLQALHDVVSNIGSIPGLTM------ 455 (546)
T ss_dssp CCSSCCCGGGEEEEEEEECTTCCCCBEEEECTTC--CEEEEECCTTCSHHHHHHHHHHHHHHTTTGGGSTTCEE------
T ss_pred ccccccCCCCeEEEEeeecCCCCCCceEecCCCC--CCCcccccccCCchHHHHHHHHHHHHHHHhcCCCcccc------
Confidence 00 000111233444455677 999999998877 55778889999999999999999999999887542211
Q ss_pred hhHHhhhhccCCCCCCCCCCCCCHHHHHHHHHhcccccccccccccCC-----cccCCCCeEeccCCceEeeccCCCCCC
Q 008331 468 VQELIDLMVNIPTNLRPRHVVGASISLEQFCRDTVMTIWHYHGGCQVD-----RVVDRDYKVLGVDGLRVIDGSTFYNSP 542 (570)
Q Consensus 468 ~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~H~~GTc~MG-----~VVD~~~rv~g~~nL~V~DaSv~P~~~ 542 (570)
..|+. ..+++++.++++....+++|++|||||| +|||++|||||++||||||+||||+.+
T Consensus 456 --------------~~p~~-~~~~~~~~~~~~~~~~t~~H~~GTcrMG~~~~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~ 520 (546)
T 1kdg_A 456 --------------ITPDV-TQTLEEYVDAYDPATMNSNHWVSSTTIGSSPQSAVVDSNVKVFGTNNLFIVDAGIIPHLP 520 (546)
T ss_dssp --------------EESCT-TSCHHHHHHHSCGGGGCCSCCBCTTCBCSCTTTCSBCTTCBBTTCSSEEECSGGGCSSCC
T ss_pred --------------cCCCC-CCCHHHHHHHHHHhcCcccccccceecCCCCCCeeECCCCeEccCCCcEEeEecccCCCC
Confidence 12443 4678889999988888899999999999 699999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHHHhhcc
Q 008331 543 GTNPQATCMMLGRYMGLRILQD 564 (570)
Q Consensus 543 ~~NP~lTi~Ala~r~a~~i~~~ 564 (570)
++||++|+||||+|+||+|+++
T Consensus 521 ~~np~~ti~aiAeraAd~I~~~ 542 (546)
T 1kdg_A 521 TGNPQGTLMSAAEQAAAKILAL 542 (546)
T ss_dssp SSCSHHHHHHHHHHHHHHHHHS
T ss_pred CccHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999987764
No 9
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=100.00 E-value=8.6e-60 Score=505.94 Aligned_cols=443 Identities=19% Similarity=0.181 Sum_probs=294.2
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCCC-CCCcccccccc--cccCCCCCCCCCc-------------
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPYE-NPNITDTGNFA--TTLLDPSPTSPSQ------------- 101 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~------------- 101 (570)
..+||+||||+|.+|+++|.+|++ |.+|+|||+|..... .+....+.... ....+|.+.+.++
T Consensus 3 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~t~p~~~~~~l~~~~~~~ 82 (504)
T 1n4w_A 3 GGYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWNQPGPDGNIFCGMLNPDKRSSWFKNRTEAPLGSFLWLDVVNR 82 (504)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCCCCCTTSSSSCCTTSCCGGGSBSCSBCCCCTTCHHHHGGGCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCCCCCcccccccccccCccccccccccccccccccccccccc
Confidence 356999999999999999999999 999999999986442 22222222111 1112455544332
Q ss_pred ---ccc------cCCcccccCCceeccccccCceeeeCCChhhhhh--CCCChhhhh-hhhHHHHhhccCCCCC------
Q 008331 102 ---QFI------SEDGVYNARARVLGGGSVINAGFYTRASLRYVRE--VGWTESLVN-SSYEWVEKKVAHEPPM------ 163 (570)
Q Consensus 102 ---~~~------~~~~~~~~~g~~lGG~s~~~~~~~~r~~~~~~~~--~gw~~~~l~-~~~~~~~~~~~~~~~~------ 163 (570)
++. .++.+.+.+|++|||+|.+|++++.|+.+.+++. .+|.+++++ |||+++|+.+...+..
T Consensus 83 ~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~~~w~~~~l~~pyy~~~E~~~~~~~~~~~~~~~ 162 (504)
T 1n4w_A 83 NIDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEILPRVDSSEMYDRYFPRANSMLRVNHIDTKWFED 162 (504)
T ss_dssp BCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHCTTSCHHHHHHTHHHHHHHHHTCBCCCHHHHHH
T ss_pred cccccccccceecCCceEEEEeeecchHHHhhCeEEEeCCHHHHHHhccccchhhhhhHHHHHHHHHhCCCCCCcccccC
Confidence 222 4556788999999999999999999999976654 578899999 9999999987654422
Q ss_pred ---cchHHHHHHHHHHcCCCC----CC-CCC---------cCCCCcceeeeeEECCCCccccHH-Hhhhhc-CCCCeEEE
Q 008331 164 ---LQWQSAVRDGLLEAGVLP----YN-GFT---------FDHIYGTKVSGTIFDEDGHRHSAA-DLLEYA-DPEKLTVY 224 (570)
Q Consensus 164 ---~~~~~~~~~~~~~~G~~~----~~-~~~---------~~~~~~~~~~~~~~~~~g~r~~~~-~~l~~~-~~~g~~i~ 224 (570)
.+..+.+.++++++|+++ .+ .+. ...+..|..+...| .+| |.++. .|++.+ ++.|++|+
T Consensus 163 ~~~~p~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~g~~~~~~~~G~c~~g~-~~g-r~s~~~~~l~~a~~~~n~~i~ 240 (504)
T 1n4w_A 163 TEWYKFARVSREQAGKAGLGTVFVPNVYDFGYMQREAAGEVPKSALATEVIYGN-NHG-KQSLDKTYLAAALGTGKVTIQ 240 (504)
T ss_dssp CGGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTSSCCSGGGTCSTTCC-SSS-BCCTTTTHHHHHHHTTSEEEE
T ss_pred CCcchHHHHHHHHHHHcCCCCccCCcccccCccccccCccccCCcccccccccC-CCC-ccCHHHHHHHHHHhcCCcEEE
Confidence 245577888999999842 11 110 00011111111112 467 77754 477644 45579999
Q ss_pred ecceEEEEEecCCCCCCCeEEEEEEEecCC---ceEEEEecCCCCceEEEcCCccccHHHHHHhC-CCChhhhhhcCCcc
Q 008331 225 LRAVVQRIKFTETGRAKPTAHCVTFYDHVG---ARHRACLNNGGKNEIILSAGAIGSPQLLMLSG-VGPANELRKRGIRV 300 (570)
Q Consensus 225 ~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G---~~~~v~~~~~aa~~VVLaaGa~~tp~LLl~SG-iG~~~~l~~~gi~~ 300 (570)
++++|++|++++++ .+++||++.+.+| +.++++ +++||||||+|+||+||++|| || ||++
T Consensus 241 ~~~~V~~i~~~~~g---~~~~gV~~~~~~g~~~~~~~v~-----A~~VIlaaG~~~s~~lL~~Sg~ig--------~i~~ 304 (504)
T 1n4w_A 241 TLHQVKTIRQTKDG---GYALTVEQKDTDGKLLATKEIS-----CRYLFLGAGSLGSTELLVRARDTG--------TLPN 304 (504)
T ss_dssp ESEEEEEEEECTTS---SEEEEEEEECTTCCEEEEEEEE-----EEEEEECSHHHHHHHHHHHHHHTT--------SSTT
T ss_pred eCCEEEEEEECCCC---CEEEEEEEeCCCCccceeEEEe-----eCEEEEccCCCCCHHHHHhccccC--------CCCC
Confidence 99999999998632 2899999986567 455564 579999999999999999999 87 5665
Q ss_pred cccCCccCcccccCCCceeeeccCCcccchhhhhhcccchhhhHhhhcCCccCcCccccccccccccccccCCCCCCChH
Q 008331 301 VVDQPNVGQGMSDNPMNALFVPSARPVEVSLVQVVGITRFDSYIETASGLSLAPSWAQGLTRDYSSFLNKTDIPSLVTPE 380 (570)
Q Consensus 301 ~~~~p~VG~~l~dh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (570)
+ ++.||+||+||+...+..... +.. ..+.+. .+.. . ..+..+.. +.. +.
T Consensus 305 ~--~~~VG~nl~dh~~~~~~~~~~-~~~----------~~~~~~---~~~~-~--------~~~~~~~~----~~~--~~ 353 (504)
T 1n4w_A 305 L--NSEVGAGWGPNGNIMTARANH-MWN----------PTGAHQ---SSIP-A--------LGIDAWDN----SDS--SV 353 (504)
T ss_dssp C--CTTTTCCBBCTTCEEEEEECC-TTC----------CCCSCC---CSSC-C--------EEEEECCS----STT--CE
T ss_pred C--ChhhccccccCCcceeeeccC-CCC----------cccCcC---CCcc-E--------EEEeccCC----CCC--ce
Confidence 4 568999999999766543211 100 000000 0000 0 00000000 000 00
Q ss_pred HHHHHhHhhhccCCCceeeEEEEeecccccccEEEEecCCCCCCCCeeecCCCCCHhHHHHHHHHHH-HHHHHHcCcccc
Q 008331 381 TVAEAVETVNSYLNGTIRAGVIVEKIMGPRSTGHLRLRTLDADDNPSVTFNYFQEPEDLVRCVQGMR-TIIDVLNSRALS 459 (570)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~-~~~~i~~~~~~~ 459 (570)
.+..+ ..+........+...+.+|.|+|+|+|+++| |.|+++|+.++ | +.+.++++ .+++++++.+.
T Consensus 354 ~~~~~-----~~~~~~~~~~~~~~~~~~p~srG~V~L~s~~----~~i~~~~~~~~-D-~~~~~~~~~~~~~i~~~~~~- 421 (504)
T 1n4w_A 354 FAEIA-----PMPAGLETWVSLYLAITKNPQRGTFVYDAAT----DRAKLNWTRDQ-N-APAVNAAKALFDRINKANGT- 421 (504)
T ss_dssp EEEEE-----CCCCSSCCCEEEEEEEECCCCCBCEEEETTT----TEEEECCCGGG-G-HHHHHHHHHHHHHHHHHHTC-
T ss_pred EEEec-----cCChHHHhhhhhheeeeccCCCcEEEecCCC----CceEeccCCCc-C-HHHHHHHHHHHHHHHhccCC-
Confidence 00000 0000000123344455679999999998865 47899999998 8 77888888 88888877542
Q ss_pred cccCCCcchhHHhhhhccCCCCCCCCCCCCCHHHHHHHHHhcccccccccccccCCcccCCCCeEeccCCceEeeccCCC
Q 008331 460 KFRYPDVSVQELIDLMVNIPTNLRPRHVVGASISLEQFCRDTVMTIWHYHGGCQVDRVVDRDYKVLGVDGLRVIDGSTFY 539 (570)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~H~~GTc~MG~VVD~~~rv~g~~nL~V~DaSv~P 539 (570)
+...+. +. . +++.+ ...+++|++||||||+|||++|||||++||||||+||||
T Consensus 422 -~~~~~~---------------~~-----~---~~~~~---~~~~~~H~~GTcrMG~VVD~~~rV~Gv~nLrVvDaSv~P 474 (504)
T 1n4w_A 422 -IYRYDL---------------FG-----T---QLKAF---ADDFCYHPLGGCVLGKATDDYGRVAGYKNLYVTDGSLIP 474 (504)
T ss_dssp -CBCCSS---------------SS-----S---SCCSE---ECSEESSCBCSSCTTTTBCTTSBBTTCSSEEECSGGGSC
T ss_pred -CcCCch---------------hh-----h---hhhhh---ccCccccccCCceeeeEECCCCeEeccCCeEEeeccccC
Confidence 100000 00 0 00000 345789999999999999999999999999999999999
Q ss_pred CCCCCchHHHHHHHHHHHHHHhhccccCcC
Q 008331 540 NSPGTNPQATCMMLGRYMGLRILQDRDRIS 569 (570)
Q Consensus 540 ~~~~~NP~lTi~Ala~r~a~~i~~~~~~~~ 569 (570)
+++++||++|+||||+|+||+|+++....|
T Consensus 475 ~~~~~np~~ti~aiAeraAd~I~~~~~~~~ 504 (504)
T 1n4w_A 475 GSVGVNPFVTITALAERNVERIIKQDVTAS 504 (504)
T ss_dssp SCCSSCSHHHHHHHHHHHHHHHHHHHC---
T ss_pred CCCCcChHHHHHHHHHHHHHHHHHhhccCC
Confidence 999999999999999999999998766543
No 10
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=100.00 E-value=1.1e-58 Score=497.47 Aligned_cols=437 Identities=16% Similarity=0.155 Sum_probs=291.9
Q ss_pred CCCCCCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCCC-CCCcccccccccc-----cCCCCCCCCCc------
Q 008331 35 SAPLISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPYE-NPNITDTGNFATT-----LLDPSPTSPSQ------ 101 (570)
Q Consensus 35 ~~~~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~~~------ 101 (570)
+.....+||+||||+|.+|+++|.+|++ |.+|+|||+|..... .+.. ..+... ..+|.+.+.++
T Consensus 5 ~~~~~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~~~~p~~---~~~~~~~~~~~~~~w~~~~~pq~~~~~~ 81 (507)
T 1coy_A 5 TLADGDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSWDTPGSDG---KIFCGMLNPDKRSMWLADKTDQPVSNFM 81 (507)
T ss_dssp CCCTTCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCSCSCCTTS---CSSCCSSSCCTTSBBSCSBCCCSSCSBT
T ss_pred CCCcCCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCCCCcc---cccccccccccccccccccccccccccc
Confidence 3445668999999999999999999999 999999999985431 1100 011111 12345544433
Q ss_pred ---------ccc------cCCcccccCCceeccccccCceeeeCCChhhhhh--CCCChhhhh-hhhHHHHhhccCCCCC
Q 008331 102 ---------QFI------SEDGVYNARARVLGGGSVINAGFYTRASLRYVRE--VGWTESLVN-SSYEWVEKKVAHEPPM 163 (570)
Q Consensus 102 ---------~~~------~~~~~~~~~g~~lGG~s~~~~~~~~r~~~~~~~~--~gw~~~~l~-~~~~~~~~~~~~~~~~ 163 (570)
.+. .++.+.+.+|++|||+|.+|++++.|+.+.+++. .+|.+++++ |||+++|+.+...+..
T Consensus 82 ~~~~~~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~dfd~w~~~w~~~~l~~pyy~~~E~~~~~~~~~ 161 (507)
T 1coy_A 82 GFGINKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKRNYFEEILPSVDSNEMYNKYFPRANTGLGVNNID 161 (507)
T ss_dssp TBSCCCBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHCTTSCHHHHHHTHHHHHHHHHTCBCCC
T ss_pred ccccccccccccceeeEecCCCeEEEEecccchHHHhhCeEEeeCCHHHHHhhCCccchhcchhHHHHHHHHHhCCCCCC
Confidence 333 4567788899999999999999999999976654 578899999 9999999988765432
Q ss_pred ---------cchHHHHHHHHHHcCCCCC----C-CCC---------cCCCCcceeeeeEECCCCccccHH-Hhhhh-cCC
Q 008331 164 ---------LQWQSAVRDGLLEAGVLPY----N-GFT---------FDHIYGTKVSGTIFDEDGHRHSAA-DLLEY-ADP 218 (570)
Q Consensus 164 ---------~~~~~~~~~~~~~~G~~~~----~-~~~---------~~~~~~~~~~~~~~~~~g~r~~~~-~~l~~-~~~ 218 (570)
.+..+.+.++++++|+++. + .+. ...+..|..+...| .+| |+++. .|++. .++
T Consensus 162 ~~~~~~~~~~~~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~~~~~~~~~~g~C~~gc-~~g-R~s~~~~~l~~a~~~ 239 (507)
T 1coy_A 162 QAWFESTEWYKFARTGRKTAQRSGFTTAFVPNVYDFEYMKKEAAGQVTKSGLGGEVIYGN-NAG-KKSLDKTYLAQAAAT 239 (507)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTCSCCSTTTTCSTTCC-SSS-BCCTTTTHHHHHHHT
T ss_pred CccccccccchHHHHHHHHHHHcCCCCccCCcccccCcccccCCCcccCccccccccccC-CCC-CcChHHHHHHHHHhc
Confidence 2345678889999998421 1 110 00011111111112 467 77754 47764 345
Q ss_pred CCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCc---eEEEEecCCCCceEEEcCCccccHHHHHHhC-CCChhhhh
Q 008331 219 EKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGA---RHRACLNNGGKNEIILSAGAIGSPQLLMLSG-VGPANELR 294 (570)
Q Consensus 219 ~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~---~~~v~~~~~aa~~VVLaaGa~~tp~LLl~SG-iG~~~~l~ 294 (570)
.|++|+++++|++|++++++ .+++||++.+.+|. .++++ +++||||||+|+||+||++|| ||.
T Consensus 240 ~n~~i~~~~~v~~i~~~~~g---~~~~gV~~~~~~g~~~~~~~~~-----A~~VIlaaGa~~sp~lL~~Sg~iG~----- 306 (507)
T 1coy_A 240 GKLTITTLHRVTKVAPATGS---GYSVTMEQIDEQGNVVATKVVT-----ADRVFFAAGSVGTSKLLVSMKAQGH----- 306 (507)
T ss_dssp TCEEEECSEEEEEEEECSSS---SEEEEEEEECTTSCEEEEEEEE-----EEEEEECSHHHHHHHHHHHHHHTTS-----
T ss_pred CCcEEEeCCEEEEEEECCCC---CEEEEEEEeCCCCcccccEEEE-----eCEEEEccCccCCHHHHHhcccCCC-----
Confidence 67999999999999998632 27999999865663 45664 579999999999999999999 882
Q ss_pred hcCCcccccCCccCcccccCCCceeeec-cCCcccchhhhhhcccchhhhHhhhcCCccCc---Cccccccccccccccc
Q 008331 295 KRGIRVVVDQPNVGQGMSDNPMNALFVP-SARPVEVSLVQVVGITRFDSYIETASGLSLAP---SWAQGLTRDYSSFLNK 370 (570)
Q Consensus 295 ~~gi~~~~~~p~VG~~l~dh~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~ 370 (570)
++ +.++.||+||+||+....... .... ..+.+ .+..... .+...-...+.. ..
T Consensus 307 ---lp--nl~d~VG~~l~~h~~~~~~~~~~~~~------------~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~- 363 (507)
T 1coy_A 307 ---LP--NLSSQVGEGWGNNGNIMVGRANHMWD------------ATGSK----QATIPTMGIDNWADPTAPIFAE-IA- 363 (507)
T ss_dssp ---ST--TSCTTTTCCBBCTTEEEEEEECCTTS------------CCCSC----CCSSCCEEEECTTCTTSCEEEE-EE-
T ss_pred ---CC--ccChhhCCccccCCcccccccccccc------------ccccc----CCCcceEEEeccCCCCCCcEEE-ec-
Confidence 33 345689999999986432110 1000 00000 0000000 000000000000 00
Q ss_pred cCCCCCCChHHHHHHhHhhhccCCCceeeEEEEeecccccccEEEEecCCCCCCCCeeecCCCCCHhHHHHHHHHHH-HH
Q 008331 371 TDIPSLVTPETVAEAVETVNSYLNGTIRAGVIVEKIMGPRSTGHLRLRTLDADDNPSVTFNYFQEPEDLVRCVQGMR-TI 449 (570)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~-~~ 449 (570)
..+. .+. ....+...+.+|.|+|+|+|+++|+ .|+++|+.++ | ..+.++++ .+
T Consensus 364 ~~~~----------------~~~----~~~~~~~~~~~p~s~G~V~L~s~~~----~i~~~~~~~~-D-~~~~~~~~~~~ 417 (507)
T 1coy_A 364 PLPA----------------GLE----TYVSLYLAITKNPERARFQFNSGTG----KVDLTWAQSQ-N-QKGIDMAKKVF 417 (507)
T ss_dssp CCCC----------------SSC----CCEEEEEEEECCCCCBCEEEETTTT----EEEECCCGGG-G-HHHHHHHHHHH
T ss_pred cCCH----------------HHh----hheeeeEEEeeeCCCcEEEEccCCC----ceeeccCCCC-c-HHHHHHHHHHH
Confidence 0000 000 1223334456799999999988653 8999999999 8 45666666 88
Q ss_pred HHHHcCcccccccCCCcchhHHhhhhccCCCCCCCCCCCCCHHHHHHHHHhcccccccccccccCCcccCCCCeEeccCC
Q 008331 450 IDVLNSRALSKFRYPDVSVQELIDLMVNIPTNLRPRHVVGASISLEQFCRDTVMTIWHYHGGCQVDRVVDRDYKVLGVDG 529 (570)
Q Consensus 450 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~H~~GTc~MG~VVD~~~rv~g~~n 529 (570)
++++++.+. +...+ . .++++ ++| ...+++|++||||||+|||++|||||++|
T Consensus 418 ~~i~~~~~~--~~~~~----------------~-----~~~d~--~~~---~~~~~~H~~GTcrMG~VVD~~~rV~Gv~n 469 (507)
T 1coy_A 418 DKINQKEGT--IYRTD----------------L-----FGVYY--KTW---GDDFTYHPLGGVLLNKATDNFGRLPEYPG 469 (507)
T ss_dssp HHHHHHHTC--CBCSS----------------C-----C--CC--CSS---BCSEESCCBCSSCTTTTSCTTSBCTTSTT
T ss_pred HHHHhhcCC--cccCc----------------c-----cccch--hhh---cccccccccCCcchhheECCCCeEeccCC
Confidence 999887652 22111 0 01111 112 34578999999999999999999999999
Q ss_pred ceEeeccCCCCCCCCchHHHHHHHHHHHHHHhhcccc
Q 008331 530 LRVIDGSTFYNSPGTNPQATCMMLGRYMGLRILQDRD 566 (570)
Q Consensus 530 L~V~DaSv~P~~~~~NP~lTi~Ala~r~a~~i~~~~~ 566 (570)
|||||+||||+++++||++||||||+|+||+|+++++
T Consensus 470 LrVvDaSv~P~~~~~Np~~ti~alAeraAd~I~~~~~ 506 (507)
T 1coy_A 470 LYVVDGSLVPGNVGVNPFVTITALAERNMDKIISSDI 506 (507)
T ss_dssp EEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHHTC
T ss_pred eEEeechhccCCCCcChHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999998764
No 11
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=100.00 E-value=1.3e-47 Score=419.34 Aligned_cols=471 Identities=17% Similarity=0.137 Sum_probs=281.1
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCCCCCCcccccc----------ccc----ccCC------C---
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPYENPNITDTGN----------FAT----TLLD------P--- 94 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~~~~~~~~~~~----------~~~----~~~~------~--- 94 (570)
..+|||||||+|++|+.+|..|++ |++|+||||+....+......... +.. .+.. .
T Consensus 44 ~~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~l~~~~~ 123 (623)
T 3pl8_A 44 DIKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKFVNVIQGQLMSVSVPVNTLVV 123 (623)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSSTTCCTTCSHHHHHSGGGTHHHHHHTCEESCCCCCCCCC
T ss_pred cccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcccccccccccCCCccHHHHHHHHHHhhhhcccccccccc
Confidence 357999999999999999999999 999999999986553211000000 000 0000 0
Q ss_pred ---C--CCCCCcccccC------Cccc----ccCCceeccccccCceeeeCCChhhh--hhCCC---ChhhhhhhhHHHH
Q 008331 95 ---S--PTSPSQQFISE------DGVY----NARARVLGGGSVINAGFYTRASLRYV--REVGW---TESLVNSSYEWVE 154 (570)
Q Consensus 95 ---~--~~~~~~~~~~~------~~~~----~~~g~~lGG~s~~~~~~~~r~~~~~~--~~~gw---~~~~l~~~~~~~~ 154 (570)
. ........+.. ..+. ...+..+||.+.+|.+...|..+... ....| .++++.++|+..+
T Consensus 124 ~~~~~~~~~~~~v~l~~g~~~~~~~~~~l~~~~~~~~vGG~~~~~~g~~~r~~~~e~~~~l~~~~v~~~~~l~~~~~~~~ 203 (623)
T 3pl8_A 124 DTLSPTSWQASTFFVRNGSNPEQDPLRNLSGQAVTRVVGGMSTAWTCATPRFDREQRPLLVKDDADADDAEWDRLYTKAE 203 (623)
T ss_dssp CCSCTTSCCCSSCCSCTTCCTTCCTTSCCTTCEECCSTTGGGGTCCCBCCCCCGGGSCCSSTTCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccCcEEeccCCCcccccchhhhhhcccccccCcceeeccccccCChHHhhhhhcccCccChhhHHHHHHHHH
Confidence 0 00000000000 0011 12456789999999988888776320 00123 2366778888877
Q ss_pred hhccCCCCC--cchHH-HHHHHHHHcCCCCCCCCCcCCCCcceeeeeEECCCCccccH-HHhhhh-------cCCCCeEE
Q 008331 155 KKVAHEPPM--LQWQS-AVRDGLLEAGVLPYNGFTFDHIYGTKVSGTIFDEDGHRHSA-ADLLEY-------ADPEKLTV 223 (570)
Q Consensus 155 ~~~~~~~~~--~~~~~-~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~-~~~l~~-------~~~~g~~i 223 (570)
..+...... ..... .....+........ . .. ..+...........|+++ ..++.. .++.|++|
T Consensus 204 ~l~~vgg~~~~~~~~~~~~~~~l~~~~~~~~-~--~~---~~p~a~~~~~~~~~r~s~~~~~l~~~~~l~~~~~~~nv~v 277 (623)
T 3pl8_A 204 SYFQTGTDQFKESIRHNLVLNKLTEEYKGQR-D--FQ---QIPLAATRRSPTFVEWSSANTVFDLQNRPNTDAPEERFNL 277 (623)
T ss_dssp HHHTEESCTTTTCHHHHHHHHHHHHHTTTTS-C--CE---ECCEEEEEEETTEEEECCHHHHCCCCCEEETTEEEEEEEE
T ss_pred HhcccccccccCccccccchHHHHHhhhhcc-c--cc---ccchhhccCCCCccccchHHhhhhhhhcchhhccCCCEEE
Confidence 765433221 11111 11122222111000 0 00 000000111112234433 335542 34469999
Q ss_pred EecceEEEEEecCCCCCCCeEEEEEEEe-cCCceEEEEecCCCCceEEEcCCccccHHHHHHhCCCChhhhhhcCCcccc
Q 008331 224 YLRAVVQRIKFTETGRAKPTAHCVTFYD-HVGARHRACLNNGGKNEIILSAGAIGSPQLLMLSGVGPANELRKRGIRVVV 302 (570)
Q Consensus 224 ~~~~~V~~i~~~~~~~~~~~v~GV~~~~-~~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl~SGiG~~~~l~~~gi~~~~ 302 (570)
++++.|++|++++++ .+++||++.+ .+|+.+++ .+++||||+|++.+|+||++||||+..+|+..||++
T Consensus 278 ~~~~~V~~i~~~~~~---~~v~GV~~~~~~~g~~~~i-----~A~~VIlaaG~~~s~~lL~~sgiG~~~~l~~~~i~~-- 347 (623)
T 3pl8_A 278 FPAVACERVVRNALN---SEIESLHIHDLISGDRFEI-----KADVYVLTAGAVHNTQLLVNSGFGQLGRPNPANPPE-- 347 (623)
T ss_dssp ECSEEEEEEEECTTS---SCEEEEEEEETTTCCEEEE-----CEEEEEECSCTTHHHHHHHTTTSSCCSSCCTTSCCS--
T ss_pred EeCCEEEEEEEECCC---CEEEEEEEEEcCCCcEEEE-----ECCEEEEcCCCcCCHHHHHhcCCCccccccccCCCC--
Confidence 999999999997542 3899999997 46777676 478999999999999999999999999999999998
Q ss_pred cCCccCcccccCCCceeeeccCCcccchhhhhhcccchhhhHhhhcCCcc-------------CcCcccccccccccccc
Q 008331 303 DQPNVGQGMSDNPMNALFVPSARPVEVSLVQVVGITRFDSYIETASGLSL-------------APSWAQGLTRDYSSFLN 369 (570)
Q Consensus 303 ~~p~VG~~l~dh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-------------~~~~~~~~~~~~~~~~~ 369 (570)
++|.||+||+||+...+.+.++.+....+...+... + | ..|..+ .+.|......++.....
T Consensus 348 ~l~~vG~nl~dh~~~~~~~~~~~~~~~~~~~~~~~~--g-~---~g~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~~~ 421 (623)
T 3pl8_A 348 LLPSLGSYITEQSLVFCQTVMSTELIDSVKSDMTIR--G-T---PGELTYSVTYTPGASTNKHPDWWNEKVKNHMMQHQE 421 (623)
T ss_dssp SCTTTTBSCBCCCEEEEEEEECHHHHHHHTTTCEEE--S-C---TTSTTCEEECCTTCTTCSSCHHHHHHHHHHHHHCTT
T ss_pred CCcccccchhhCcCceEEEEECCccccccccccccc--c-c---CCCcceecccccCcccccCCchhhhhhhhhhhcccc
Confidence 999999999999998887776654211111100000 0 0 000000 00000000000000000
Q ss_pred --ccCCCCCCChHHH------HHHhHh-----h------hccCCC-ceeeEEEEeecccccccEEEEecC--CCCCCCCe
Q 008331 370 --KTDIPSLVTPETV------AEAVET-----V------NSYLNG-TIRAGVIVEKIMGPRSTGHLRLRT--LDADDNPS 427 (570)
Q Consensus 370 --~~~~~~~~~~~~~------~~~~~~-----~------~~~~~~-~~~~~~~~~~~~~p~s~g~v~l~~--~d~~~~p~ 427 (570)
...|-....+... ..|..+ + ..+... ...+..+.+.+ |.++|+|+|++ +|+++.|.
T Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~--p~~~n~v~L~~~~~D~~g~P~ 499 (623)
T 3pl8_A 422 DPLPIPFEDPEPQVTTLFQPSHPWHTQIHRDAFSYGAVQQSIDSRLIVDWRFFGRTE--PKEENKLWFSDKITDAYNMPQ 499 (623)
T ss_dssp CCCSSCTTCCCCEEECCCBTTBCEEEEEECCSCCCSCCCCSSCGGGEEEEEEEECCC--CCTTCEEEEEEEEECTTSSEE
T ss_pred cccccccccccccccccccccCcchhhhhhhhccccccccccccceEEEEEEEEeec--cCCCCEEEECCCCcCCCCCce
Confidence 0000000000000 000000 0 000000 11233344444 77799999976 79999999
Q ss_pred eecCCCCCHh-HHHHHHHHHHHHHHHHcCcccccccCCCcchhHHhhhhccCCCCCCCCCCCCCHHHHHHHHHhcccccc
Q 008331 428 VTFNYFQEPE-DLVRCVQGMRTIIDVLNSRALSKFRYPDVSVQELIDLMVNIPTNLRPRHVVGASISLEQFCRDTVMTIW 506 (570)
Q Consensus 428 i~~~~~~~~~-D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~ 506 (570)
++++|..+++ |+++++++++.+.+++++++.......+. .. ...+++
T Consensus 500 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~~~~---------------~~-----------------~~~~~~ 547 (623)
T 3pl8_A 500 PTFDFRFPAGRTSKEAEDMMTDMCVMSAKIGGFLPGSLPQ---------------FM-----------------EPGLVL 547 (623)
T ss_dssp EEEECCCCTTHHHHHHHHHHHHHHHHHTTTEEECTTSCSE---------------EC-----------------CTTTTC
T ss_pred EEEEEeCCcHHHHHHHHHHHHHHHHHHHhcCCcccCchhh---------------cc-----------------CCCCcc
Confidence 9999999999 99999999999999998876443211100 00 123588
Q ss_pred cccccccCC------ccc-CCCCeEeccCCceEeeccCCCCCCCCchHHHHHHHHHHHHHHhhccc
Q 008331 507 HYHGGCQVD------RVV-DRDYKVLGVDGLRVIDGSTFYNSPGTNPQATCMMLGRYMGLRILQDR 565 (570)
Q Consensus 507 H~~GTc~MG------~VV-D~~~rv~g~~nL~V~DaSv~P~~~~~NP~lTi~Ala~r~a~~i~~~~ 565 (570)
|++|||||| +|| |++|||||++||||+|+|+||+++++||++|+||||+|+|++|+++.
T Consensus 548 H~~gt~~mg~~~~~~~vvvd~~~~~~~~~~l~v~d~s~~p~~~~~np~~t~~a~a~r~a~~i~~~~ 613 (623)
T 3pl8_A 548 HLGGTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQNF 613 (623)
T ss_dssp CCBCTTCBCSSTTTTTCSBCTTCBBTTCSSEEECSGGGCCSCCCSCCHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCceeCCCCCCCCeeEECCCCCEecCCCeEEecCCccCCCCCcChHHHHHHHHHHHHHHHHHHh
Confidence 999999999 586 99999999999999999999999999999999999999999998764
No 12
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.61 E-value=8.6e-15 Score=156.97 Aligned_cols=193 Identities=16% Similarity=0.195 Sum_probs=110.1
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCCCCCCcccccccccccCCCCCCCCCcccccCCcccccCCcee
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPYENPNITDTGNFATTLLDPSPTSPSQQFISEDGVYNARARVL 117 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l 117 (570)
+.+|||||||+|++|+++|.+|++ |++|+||||++. .
T Consensus 39 ~~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~------------------------------------------~ 76 (510)
T 4at0_A 39 DYEADVVVAGYGIAGVAASIEAARAGADVLVLERTSG------------------------------------------W 76 (510)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS------------------------------------------S
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCC------------------------------------------C
Confidence 568999999999999999999999 999999999863 3
Q ss_pred ccccccCceeeeCCC-hhhhhhCCCChhhhhhhhHHHHhhccCCCCCcc------hHHHHHHHHHHcCCCCCCCCC----
Q 008331 118 GGGSVINAGFYTRAS-LRYVREVGWTESLVNSSYEWVEKKVAHEPPMLQ------WQSAVRDGLLEAGVLPYNGFT---- 186 (570)
Q Consensus 118 GG~s~~~~~~~~r~~-~~~~~~~gw~~~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~G~~~~~~~~---- 186 (570)
||+|..+++.++.+. ..+....+.. +..+.++++..+......+... ......+++.+.|++......
T Consensus 77 GG~s~~s~G~~~~~~~~~~~~~~g~~-ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~~~ 155 (510)
T 4at0_A 77 GGATALAGGFIYLGGGTPLQKACGFD-DSPENMKTFMMAALGPGADEEKITDYCEGSVEHYNWLVDCGVPFKESFWGEPG 155 (510)
T ss_dssp CTTGGGSCCCEECCSSCHHHHHTTCC-CCHHHHHHHHHHHSCSSCCHHHHHHHHHTHHHHHHHHHHTTCCCCSCEECSSS
T ss_pred CCcchhcCcceecCCCCHHHHHhCCC-CCHHHHHHHHHHHhCCCCCHHHHHHHHHhhHHHHHHHHHcCCeecccccCCcc
Confidence 556666655544332 2222222211 2222333333322221111110 012345566677764221100
Q ss_pred --cCCCCc------------------ceeeeeEECC----CCcc----ccHHHhhhhcCCCCeEEEecceEEEEEecCCC
Q 008331 187 --FDHIYG------------------TKVSGTIFDE----DGHR----HSAADLLEYADPEKLTVYLRAVVQRIKFTETG 238 (570)
Q Consensus 187 --~~~~~~------------------~~~~~~~~~~----~g~r----~~~~~~l~~~~~~g~~i~~~~~V~~i~~~~~~ 238 (570)
.....+ ...+... .. .+.. .....++..+++.|++|+++++|++|+.++++
T Consensus 156 ~~~~~~~~~~~~g~e~~~~~~~~~~~~~r~~~~-~~~~~~~g~~~g~~~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g 234 (510)
T 4at0_A 156 WEPPFDDGLMYSGGENAAPFNEIAAPAPRGHVP-QMDGKRTGEKGGGYMLMKPLVETAEKLGVRAEYDMRVQTLVTDDTG 234 (510)
T ss_dssp SSCSSSCSEECCSSTTSTTGGGTSCCCCCEECC-CCSSCBTTTBCTTHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTC
T ss_pred cccCCcccccccCcccccccccccCcccceeee-cccccccccCCCHHHHHHHHHHHHHHcCCEEEecCEeEEEEECCCC
Confidence 000000 0000000 00 1111 11222555666679999999999999998544
Q ss_pred CCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCccc-cHHHHHH
Q 008331 239 RAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIG-SPQLLML 284 (570)
Q Consensus 239 ~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~-tp~LLl~ 284 (570)
+|+||++.+ +|+.++++ +.|.||||+|++. ++.+|.+
T Consensus 235 ----~v~GV~~~~-~g~~~~i~----A~k~VVlAtGG~~~n~~m~~~ 272 (510)
T 4at0_A 235 ----RVVGIVAKQ-YGKEVAVR----ARRGVVLATGSFAYNDKMIEA 272 (510)
T ss_dssp ----CEEEEEEEE-TTEEEEEE----EEEEEEECCCCCTTCHHHHHH
T ss_pred ----cEEEEEEEE-CCcEEEEE----eCCeEEEeCCChhhCHHHHHH
Confidence 999999985 66666665 3369999999998 5555543
No 13
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.51 E-value=9.8e-14 Score=150.63 Aligned_cols=190 Identities=16% Similarity=0.162 Sum_probs=109.3
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCCCCCCcccccccccccCCCCCCCCCcccccCCcccccCCcee
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPYENPNITDTGNFATTLLDPSPTSPSQQFISEDGVYNARARVL 117 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l 117 (570)
..++||||||+|++|+++|..|++ |++|+||||++..
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~------------------------------------------ 156 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFS------------------------------------------ 156 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSS------------------------------------------
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC------------------------------------------
Confidence 467999999999999999999999 9999999998643
Q ss_pred ccccccCceeeeCCChhhhhhCCCChhhhhhhhHHHHhhccCCCCCcc------hHHHHHHHHHHcCCCCCCCCCcCCCC
Q 008331 118 GGGSVINAGFYTRASLRYVREVGWTESLVNSSYEWVEKKVAHEPPMLQ------WQSAVRDGLLEAGVLPYNGFTFDHIY 191 (570)
Q Consensus 118 GG~s~~~~~~~~r~~~~~~~~~gw~~~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~G~~~~~~~~~~~~~ 191 (570)
||.|...++.........++..+.. +..+.++....+......+... ......+++.+.|++. ... ....
T Consensus 157 gg~s~~s~gg~~~~~~~~~~~~g~~-ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~Gv~~-~~~--~~~~ 232 (566)
T 1qo8_A 157 GGNSMISAGGMNAVGTKQQTAHGVE-DKVEWFIEDAMKGGRQQNDIKLVTILAEQSADGVQWLESLGANL-DDL--KRSG 232 (566)
T ss_dssp CTTGGGCCSCEECSSCHHHHHTTCC-CCHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCC-CEE--ECCT
T ss_pred CCcccccCceeEccCCHHHHHhCCC-CCHHHHHHHHHHhcCCCCCHHHHHHHHhccHHHHHHHHhcCCcc-ccc--cccC
Confidence 3444444333332222222222211 2233344333222111111100 1123455667777642 110 0011
Q ss_pred cceeeeeEECCCCcc--c-cHHHhhhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCce
Q 008331 192 GTKVSGTIFDEDGHR--H-SAADLLEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNE 268 (570)
Q Consensus 192 ~~~~~~~~~~~~g~r--~-~~~~~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~ 268 (570)
+........+.++.. . ....+...+++.|++|+++++|++|+.++++ +|+||++.+.+|+..+++ ++.
T Consensus 233 g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g----~v~Gv~~~~~~g~~~~i~-----A~~ 303 (566)
T 1qo8_A 233 GARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDH----SVVGAVVHGKHTGYYMIG-----AKS 303 (566)
T ss_dssp TCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTS----BEEEEEEEETTTEEEEEE-----EEE
T ss_pred CCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCC----cEEEEEEEeCCCcEEEEE-----cCE
Confidence 111111121222211 1 1122445566679999999999999998733 999999987678766665 699
Q ss_pred EEEcCCccccHHHHH
Q 008331 269 IILSAGAIGSPQLLM 283 (570)
Q Consensus 269 VVLaaGa~~tp~LLl 283 (570)
||||+|++...+-|+
T Consensus 304 VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 304 VVLATGGYGMNKEMI 318 (566)
T ss_dssp EEECCCCCTTCHHHH
T ss_pred EEEecCCcccCHHHH
Confidence 999999987644443
No 14
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.50 E-value=2e-13 Score=148.35 Aligned_cols=186 Identities=17% Similarity=0.139 Sum_probs=105.4
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCCCCCCcccccccccccCCCCCCCCCcccccCCcccccCCceec
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPYENPNITDTGNFATTLLDPSPTSPSQQFISEDGVYNARARVLG 118 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lG 118 (570)
+++||||||+|++|+++|..|++ |++|+||||++.. |
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~------------------------------------------g 162 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVI------------------------------------------G 162 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS------------------------------------------C
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC------------------------------------------C
Confidence 36999999999999999999999 9999999998643 3
Q ss_pred cccccCceeeeCCChhhhhhCCCChhhhhhhhHHHHhhccCCCCCcc------hHHHHHHHHHHcCCCCCCCCCcCCCCc
Q 008331 119 GGSVINAGFYTRASLRYVREVGWTESLVNSSYEWVEKKVAHEPPMLQ------WQSAVRDGLLEAGVLPYNGFTFDHIYG 192 (570)
Q Consensus 119 G~s~~~~~~~~r~~~~~~~~~gw~~~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~G~~~~~~~~~~~~~~ 192 (570)
|.|...++.............+.. +..+.++....+.-....+... ......+++.+.|++. ... ....+
T Consensus 163 g~s~~a~gg~~~~~~~~~~~~g~~-ds~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~-~~~--~~~~g 238 (571)
T 1y0p_A 163 GNAKLAAGGMNAAWTDQQKAKKIT-DSPELMFEDTMKGGQNINDPALVKVLSSHSKDSVDWMTAMGADL-TDV--GMMGG 238 (571)
T ss_dssp TTGGGCCSCEECSSCHHHHHTTCC-CCHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCC-CEE--ECCTT
T ss_pred CchhhcCceEEeCCCHHHHHhCCC-CCHHHHHHHHHHhcCCCCCHHHHHHHHHccHHHHHHHHhcCCCC-ccC--cccCC
Confidence 333333332222222222222221 2223333332211111111000 0123455666777642 110 00111
Q ss_pred ceeeeeEECCCCcccc---HHHhhhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceE
Q 008331 193 TKVSGTIFDEDGHRHS---AADLLEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEI 269 (570)
Q Consensus 193 ~~~~~~~~~~~g~r~~---~~~~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~V 269 (570)
........+.++.... ...+...+.+.|++|+++++|++|+.++++ +++||.+.+.+|+..++. ++.|
T Consensus 239 ~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g----~v~Gv~~~~~~g~~~~i~-----a~~V 309 (571)
T 1y0p_A 239 ASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKG----TVKGILVKGMYKGYYWVK-----ADAV 309 (571)
T ss_dssp CSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECTTS----CEEEEEEEETTTEEEEEE-----CSEE
T ss_pred cCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCC----eEEEEEEEeCCCcEEEEE-----CCeE
Confidence 1111122222221111 112445566679999999999999998733 899999986677766664 6889
Q ss_pred EEcCCccccHH
Q 008331 270 ILSAGAIGSPQ 280 (570)
Q Consensus 270 VLaaGa~~tp~ 280 (570)
|||+|++...+
T Consensus 310 VlAtGg~~~n~ 320 (571)
T 1y0p_A 310 ILATGGFAKNN 320 (571)
T ss_dssp EECCCCCTTCH
T ss_pred EEeCCCcccCH
Confidence 99999987543
No 15
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.39 E-value=2.8e-12 Score=139.15 Aligned_cols=190 Identities=19% Similarity=0.147 Sum_probs=103.3
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCCCCCCcccccccccccCCCCCCCCCcccccCCcccccCCceec
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPYENPNITDTGNFATTLLDPSPTSPSQQFISEDGVYNARARVLG 118 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lG 118 (570)
.++||||||+|++|+++|..|++ |.+|+||||.+...
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~------------------------------------------ 162 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPG------------------------------------------ 162 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSC------------------------------------------
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCC------------------------------------------
Confidence 46899999999999999999999 99999999987542
Q ss_pred cccccCceeeeCCChhhhhhCCCChhhhhhhhHHHHhhccCCCCCcc------hHHHHHHHHHHcCCCCCCCCCcCCCCc
Q 008331 119 GGSVINAGFYTRASLRYVREVGWTESLVNSSYEWVEKKVAHEPPMLQ------WQSAVRDGLLEAGVLPYNGFTFDHIYG 192 (570)
Q Consensus 119 G~s~~~~~~~~r~~~~~~~~~gw~~~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~G~~~~~~~~~~~~~~ 192 (570)
|.+...++.+......+....+.. +..+.++....+......+... ......+++.+.|++. ... ....+
T Consensus 163 ~~~~~a~gg~~~~~~~~~~~~g~~-ds~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~i~~l~~~Gv~~-~~~--~~~gg 238 (572)
T 1d4d_A 163 GNTKLAAGGMNAAETKPQAKLGIE-DKKQIMIDDTMKGGRNINDPELVKVLANNSSDSIDWLTSMGADM-TDV--GRMGG 238 (572)
T ss_dssp TTGGGCCSCEECCSSSTTGGGTCC-CCTHHHHHHHHHHTTTCSCHHHHHHHHHTHHHHHHHHHHHTCCC-CEE--ECCTT
T ss_pred cchhhhCCeeEccCCHHHHHhCCC-CCHHHHHHHHHHhcCCCCCHHHHHHHHHccHHHHHHHHhcCCcc-ccc--cccCC
Confidence 222222222211111111111111 1122222222211111100000 0123455666667642 110 00111
Q ss_pred ceeeeeEECCCCcc--ccH-HHhhhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceE
Q 008331 193 TKVSGTIFDEDGHR--HSA-ADLLEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEI 269 (570)
Q Consensus 193 ~~~~~~~~~~~g~r--~~~-~~~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~V 269 (570)
........+.++.. ... ..++..+++.|++|+++++|++|+.++++ +++||++.+.+|+...+. ++.|
T Consensus 239 ~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g----~v~GV~~~~~~G~~~~i~-----A~~V 309 (572)
T 1d4d_A 239 ASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILEDASG----KVTGVLVKGEYTGYYVIK-----ADAV 309 (572)
T ss_dssp CSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC--C----CEEEEEEEETTTEEEEEE-----CSEE
T ss_pred CcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEEEEECCCC----eEEEEEEEeCCCcEEEEE-----cCEE
Confidence 11111121222211 111 22445566679999999999999988723 899999987678766665 6999
Q ss_pred EEcCCcccc-HHHHHH
Q 008331 270 ILSAGAIGS-PQLLML 284 (570)
Q Consensus 270 VLaaGa~~t-p~LLl~ 284 (570)
|||+|++.. +.++..
T Consensus 310 VlAtGg~~~~~~~~~~ 325 (572)
T 1d4d_A 310 VIAAGGFAKNNERVSK 325 (572)
T ss_dssp EECCCCCTTCHHHHHH
T ss_pred EEeCCCCccCHHHHHH
Confidence 999999874 555543
No 16
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.34 E-value=1e-11 Score=135.09 Aligned_cols=57 Identities=12% Similarity=0.153 Sum_probs=47.3
Q ss_pred hhhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEe-cCCceEEEEecCCCCceEEEcCCcccc
Q 008331 212 LLEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYD-HVGARHRACLNNGGKNEIILSAGAIGS 278 (570)
Q Consensus 212 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~-~~G~~~~v~~~~~aa~~VVLaaGa~~t 278 (570)
+...+.+.|++|++++.|++|+.+++ ++.||.+.+ .+|+.+.+. ++.||||+|++..
T Consensus 161 L~~~~~~~gv~i~~~~~v~~Li~~~g-----~v~Gv~~~~~~~G~~~~i~-----A~~VVlATGG~~~ 218 (621)
T 2h88_A 161 LYGRSLRYDTSYFVEYFALDLLMENG-----ECRGVIALCIEDGTIHRFR-----AKNTVIATGGYGR 218 (621)
T ss_dssp HHHHHTTSCCEEEETEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----EEEEEECCCCCGG
T ss_pred HHHHHHhCCCEEEEceEEEEEEEECC-----EEEEEEEEEcCCCcEEEEE-----cCeEEECCCcccc
Confidence 44566778999999999999998765 999999986 467766664 7899999999864
No 17
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.33 E-value=8.7e-12 Score=136.59 Aligned_cols=57 Identities=9% Similarity=0.056 Sum_probs=46.1
Q ss_pred hhhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEe-cCCceEEEEecCCCCceEEEcCCcccc
Q 008331 212 LLEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYD-HVGARHRACLNNGGKNEIILSAGAIGS 278 (570)
Q Consensus 212 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~-~~G~~~~v~~~~~aa~~VVLaaGa~~t 278 (570)
+...+.+.|++|++++.|++|+.+++ +|+||.+.+ .+|+.+.+. ++.||||+|++..
T Consensus 164 L~~~a~~~gv~i~~~~~v~~L~~~~g-----~v~Gv~~~~~~~G~~~~i~-----A~~VVlATGG~~~ 221 (660)
T 2bs2_A 164 VANECLKLGVSIQDRKEAIALIHQDG-----KCYGAVVRDLVTGDIIAYV-----AKGTLIATGGYGR 221 (660)
T ss_dssp HHHHHHHHTCEEECSEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----CSEEEECCCCCGG
T ss_pred HHHHHHhCCCEEEECcEEEEEEecCC-----EEEEEEEEECCCCcEEEEE-----cCEEEEccCcchh
Confidence 44455567999999999999998765 999999875 467766664 7899999999864
No 18
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.32 E-value=1.1e-11 Score=134.53 Aligned_cols=58 Identities=14% Similarity=0.111 Sum_probs=46.0
Q ss_pred hhhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEe-cCCceEEEEecCCCCceEEEcCCcccc
Q 008331 212 LLEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYD-HVGARHRACLNNGGKNEIILSAGAIGS 278 (570)
Q Consensus 212 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~-~~G~~~~v~~~~~aa~~VVLaaGa~~t 278 (570)
+...+.+.|++|++++.|++|+.++++ +++||.+.+ .+|+...+. ++.||||+|++..
T Consensus 149 L~~~~~~~gv~i~~~~~v~~L~~~~~g----~v~Gv~~~~~~~g~~~~i~-----A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 149 LYQQNLKNHTTIFSEWYALDLVKNQDG----AVVGCTALCIETGEVVYFK-----ARATVLATGGAGR 207 (588)
T ss_dssp HHHHHHHTTCEEEETEEEEEEEECTTS----CEEEEEEEETTTCCEEEEE-----EEEEEECCCCCGG
T ss_pred HHHHHHhCCCEEEeCcEEEEEEECCCC----EEEEEEEEEcCCCeEEEEE-----cCEEEECCCCCcc
Confidence 445555679999999999999997333 899999886 467766664 6899999999764
No 19
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.26 E-value=1.1e-11 Score=126.70 Aligned_cols=63 Identities=13% Similarity=0.100 Sum_probs=47.0
Q ss_pred hhhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCccccHHHHHHh-CC
Q 008331 212 LLEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIGSPQLLMLS-GV 287 (570)
Q Consensus 212 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl~S-Gi 287 (570)
+...+++.|++|+++++|++|..+++ .+..|.. .+|+..++. ++.||+|+|+ +|+.|+... |+
T Consensus 156 l~~~~~~~Gv~i~~~~~v~~i~~~~~-----~~~~v~~--~~g~~~~~~-----a~~VV~A~G~-~s~~l~~~~~g~ 219 (369)
T 3dme_A 156 YQGDAESDGAQLVFHTPLIAGRVRPE-----GGFELDF--GGAEPMTLS-----CRVLINAAGL-HAPGLARRIEGI 219 (369)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEECTT-----SSEEEEE--CTTSCEEEE-----EEEEEECCGG-GHHHHHHTEETS
T ss_pred HHHHHHHCCCEEECCCEEEEEEEcCC-----ceEEEEE--CCCceeEEE-----eCEEEECCCc-chHHHHHHhcCC
Confidence 44566778999999999999998866 3334544 367545554 7999999998 588888766 65
No 20
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.26 E-value=2.2e-11 Score=130.97 Aligned_cols=61 Identities=8% Similarity=0.092 Sum_probs=43.9
Q ss_pred hhhcCC-CCeEEEecceEEEEEecCCC--CCCCeEEEEEEEe-cCCceEEEEecCCCCceEEEcCCcccc
Q 008331 213 LEYADP-EKLTVYLRAVVQRIKFTETG--RAKPTAHCVTFYD-HVGARHRACLNNGGKNEIILSAGAIGS 278 (570)
Q Consensus 213 l~~~~~-~g~~i~~~~~V~~i~~~~~~--~~~~~v~GV~~~~-~~G~~~~v~~~~~aa~~VVLaaGa~~t 278 (570)
...+.+ .|++|++++.|++|+.++++ ....++.||.+.+ .+|+.+.+. ++.||||+|++..
T Consensus 145 ~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~-----A~~VVlAtGg~~~ 209 (540)
T 1chu_A 145 VSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCH-----AKAVVLATGGASK 209 (540)
T ss_dssp HHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEE-----CSEEEECCCCCGG
T ss_pred HHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEE-----cCeEEECCCCccc
Confidence 344444 79999999999999984321 0001799999986 357665664 7999999999754
No 21
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.21 E-value=1.8e-10 Score=125.28 Aligned_cols=58 Identities=12% Similarity=0.163 Sum_probs=45.9
Q ss_pred hhhhcCCCC-eEEEecceEEEEEecCCCCCCCeEEEEEEEe-cCCceEEEEecCCCCceEEEcCCccccH
Q 008331 212 LLEYADPEK-LTVYLRAVVQRIKFTETGRAKPTAHCVTFYD-HVGARHRACLNNGGKNEIILSAGAIGSP 279 (570)
Q Consensus 212 ~l~~~~~~g-~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~-~~G~~~~v~~~~~aa~~VVLaaGa~~tp 279 (570)
++..+.+.| ++|++++.|++|+.+++ +++||.+.+ .+|+.+.+. ++.||||+|++...
T Consensus 140 L~~~~~~~gnv~i~~~~~v~~l~~~~g-----~v~Gv~~~~~~~G~~~~i~-----A~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 140 LFQTSLQFPQIQRFDEHFVLDILVDDG-----HVRGLVAMNMMEGTLVQIR-----ANAVVMATGGAGRV 199 (602)
T ss_dssp HHHHHTTCTTEEEEETEEEEEEEEETT-----EEEEEEEEETTTTEEEEEE-----CSCEEECCCCCGGG
T ss_pred HHHHHHhCCCcEEEeCCEEEEEEEeCC-----EEEEEEEEEcCCCcEEEEE-----cCeEEECCCCCccc
Confidence 445555566 99999999999999865 899998875 467665664 68999999997653
No 22
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.21 E-value=3.4e-11 Score=130.12 Aligned_cols=66 Identities=12% Similarity=0.076 Sum_probs=53.2
Q ss_pred hhhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEec-CCceEEEEecCCCCceEEEcCCccccHHHHHHhCCC
Q 008331 212 LLEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDH-VGARHRACLNNGGKNEIILSAGAIGSPQLLMLSGVG 288 (570)
Q Consensus 212 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~-~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl~SGiG 288 (570)
+...+.+.|++|+++++|++|..+++ ++.||++.+. +|+...+. ++.||+|+|. ++..|+...|+.
T Consensus 176 L~~~a~~~G~~i~~~~~V~~l~~~~g-----~v~gV~~~d~~tg~~~~i~-----A~~VV~AaG~-~s~~l~~~~g~~ 242 (561)
T 3da1_A 176 IMKEAVARGAVALNYMKVESFIYDQG-----KVVGVVAKDRLTDTTHTIY-----AKKVVNAAGP-WVDTLREKDRSK 242 (561)
T ss_dssp HHHHHHHTTCEEEESEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----EEEEEECCGG-GHHHHHHTTTCC
T ss_pred HHHHHHHcCCEEEcCCEEEEEEEcCC-----eEEEEEEEEcCCCceEEEE-----CCEEEECCCc-chHHHHHhcCCC
Confidence 44456678999999999999999876 8999999863 46556664 7999999998 688888877654
No 23
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.15 E-value=1.1e-10 Score=122.84 Aligned_cols=54 Identities=17% Similarity=0.300 Sum_probs=42.4
Q ss_pred hhhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCccccH
Q 008331 212 LLEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIGSP 279 (570)
Q Consensus 212 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~tp 279 (570)
+...+++.|++|+++++|++|..+++ ++.+|++. +|+ ++. ++.||+|+|+...|
T Consensus 140 L~~~~~~~GV~i~~~~~V~~i~~~~~-----~v~~V~~~--~G~--~i~-----Ad~VVlAtGg~s~~ 193 (447)
T 2i0z_A 140 LLTRLKDLGVKIRTNTPVETIEYENG-----QTKAVILQ--TGE--VLE-----TNHVVIAVGGKSVP 193 (447)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETT-----EEEEEEET--TCC--EEE-----CSCEEECCCCSSSG
T ss_pred HHHHHHHCCCEEEeCcEEEEEEecCC-----cEEEEEEC--CCC--EEE-----CCEEEECCCCCcCC
Confidence 44556668999999999999998765 77888764 564 343 69999999998755
No 24
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.14 E-value=5.1e-10 Score=121.18 Aligned_cols=65 Identities=9% Similarity=-0.034 Sum_probs=51.0
Q ss_pred hhhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEec-CCceEEEEecCCCCceEEEcCCccccHHHHHHhCC
Q 008331 212 LLEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDH-VGARHRACLNNGGKNEIILSAGAIGSPQLLMLSGV 287 (570)
Q Consensus 212 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~-~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl~SGi 287 (570)
++..+.+.|++|+++++|++|..+++ ++.+|++.|. +|+..+++ ++.||+|+|+ ++..|+...|+
T Consensus 194 l~~~a~~~Ga~i~~~t~V~~l~~~~~-----~v~gV~~~d~~tg~~~~i~-----A~~VV~AaG~-ws~~l~~~~g~ 259 (571)
T 2rgh_A 194 NIKKAAEDGAYLVSKMKAVGFLYEGD-----QIVGVKARDLLTDEVIEIK-----AKLVINTSGP-WVDKVRNLNFT 259 (571)
T ss_dssp HHHHHHHTTCEEESSEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----BSCEEECCGG-GHHHHHTTCCS
T ss_pred HHHHHHHcCCeEEeccEEEEEEEeCC-----EEEEEEEEEcCCCCEEEEE-----cCEEEECCCh-hHHHHHHhhcc
Confidence 34456678999999999999999876 8999999864 45545664 7999999998 58888765543
No 25
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.13 E-value=1.8e-10 Score=118.30 Aligned_cols=36 Identities=28% Similarity=0.483 Sum_probs=33.2
Q ss_pred CCcccEEEECCCCchhHHHHhhhccCeEEEEccCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQNATVLLLEKGGS 74 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~g~~VlvLE~G~~ 74 (570)
+.++||||||+|.+|+++|++|++|.+|+||||++.
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La~G~~V~vlE~~~~ 42 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLSAHGRVVVLEREAQ 42 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHTTTSCEEEECSSSS
T ss_pred CCcCCEEEECCcHHHHHHHHHHhCCCCEEEEECCCC
Confidence 457899999999999999999999999999999864
No 26
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.12 E-value=2.5e-10 Score=125.30 Aligned_cols=59 Identities=12% Similarity=0.045 Sum_probs=44.5
Q ss_pred hhhcCCC-Ce-EEEecceEEEEEecCCCCCCCeEEEEEEEe-cCCceEEEEecCCCCceEEEcCCcccc
Q 008331 213 LEYADPE-KL-TVYLRAVVQRIKFTETGRAKPTAHCVTFYD-HVGARHRACLNNGGKNEIILSAGAIGS 278 (570)
Q Consensus 213 l~~~~~~-g~-~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~-~~G~~~~v~~~~~aa~~VVLaaGa~~t 278 (570)
...+.+. |+ +|++++.|++|+.++++ ..+|+||.+.+ .+|+...+. ++.||||+|++..
T Consensus 158 ~~~~~~~~gv~~i~~~~~v~~L~~~~~~--~g~v~Gv~~~~~~~g~~~~i~-----A~~VVlAtGG~~~ 219 (643)
T 1jnr_A 158 AEAAKMAVGEENIYERVFIFELLKDNND--PNAVAGAVGFSVREPKFYVFK-----AKAVILATGGATL 219 (643)
T ss_dssp HHHHHHHHCGGGEECSEEEEEEEECTTC--TTBEEEEEEEESSSSCEEEEE-----CSEEEECCCCBCS
T ss_pred HHHHHhcCCCcEEEecCEEEEEEEcCCc--cceeEEEEEEEecCCcEEEEE-----cCEEEECCCcccc
Confidence 3344444 99 99999999999987541 12899999865 467665664 6999999999864
No 27
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.10 E-value=1.1e-10 Score=127.85 Aligned_cols=60 Identities=10% Similarity=0.132 Sum_probs=45.5
Q ss_pred hhhhcCCC--CeEEEecceEEEEEecCCCCCCCeEEEEEEEe-cCCceEEEEecCCCCceEEEcCCcccc
Q 008331 212 LLEYADPE--KLTVYLRAVVQRIKFTETGRAKPTAHCVTFYD-HVGARHRACLNNGGKNEIILSAGAIGS 278 (570)
Q Consensus 212 ~l~~~~~~--g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~-~~G~~~~v~~~~~aa~~VVLaaGa~~t 278 (570)
+...+.+. |++|+.++.|++|+.++++ ..+|+||.+.+ .+|+.+.+. ++.||||+|+++.
T Consensus 172 L~~~a~~~~~gV~i~~~~~v~dLi~~~~~--~g~v~Gv~~~~~~~g~~~~i~-----Ak~VVLATGG~g~ 234 (662)
T 3gyx_A 172 VAEAAKNALGQDRIIERIFIVKLLLDKNT--PNRIAGAVGFNLRANEVHIFK-----ANAMVVACGGAVN 234 (662)
T ss_dssp HHHHHHHHHCTTTEECSEEECCCEECSSS--TTBEEEEEEEESSSSCEEEEE-----CSEEEECCCCBCS
T ss_pred HHHHHHhcCCCcEEEEceEEEEEEEeCCc--cceEEEEEEEEcCCCcEEEEE-----eCEEEECCCcccc
Confidence 33444444 9999999999999998651 12899999876 457766665 7999999999863
No 28
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.10 E-value=1.6e-10 Score=118.82 Aligned_cols=60 Identities=10% Similarity=0.028 Sum_probs=45.5
Q ss_pred hhhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCccccHHHHHHhCC
Q 008331 212 LLEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIGSPQLLMLSGV 287 (570)
Q Consensus 212 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl~SGi 287 (570)
+...+++.|++|+++++|++|..+++ +++||++. +| ++. ++.||+|+|+ +++.|+...|+
T Consensus 155 l~~~~~~~Gv~i~~~~~v~~i~~~~~-----~v~gv~~~--~g---~i~-----a~~VV~A~G~-~s~~l~~~~g~ 214 (382)
T 1y56_B 155 FAVKAKEYGAKLLEYTEVKGFLIENN-----EIKGVKTN--KG---IIK-----TGIVVNATNA-WANLINAMAGI 214 (382)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEESSS-----BEEEEEET--TE---EEE-----CSEEEECCGG-GHHHHHHHHTC
T ss_pred HHHHHHHCCCEEECCceEEEEEEECC-----EEEEEEEC--Cc---EEE-----CCEEEECcch-hHHHHHHHcCC
Confidence 44556678999999999999998765 78887653 55 343 7899999998 57777766543
No 29
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.07 E-value=8.6e-11 Score=123.38 Aligned_cols=37 Identities=30% Similarity=0.377 Sum_probs=33.9
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cC-eEEEEccCCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKGGSP 75 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G~~~ 75 (570)
..++||||||+|.+|+++|++|++ |. +|+||||+...
T Consensus 4 ~~~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~ 42 (438)
T 3dje_A 4 TKSSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVP 42 (438)
T ss_dssp CTTSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCC
Confidence 457999999999999999999999 99 99999998754
No 30
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.03 E-value=1.5e-09 Score=112.19 Aligned_cols=35 Identities=34% Similarity=0.565 Sum_probs=32.6
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
.++||||||+|++|+++|+.|++ |.+|+||||+..
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTF 38 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 35899999999999999999999 999999999864
No 31
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.03 E-value=2e-10 Score=119.31 Aligned_cols=36 Identities=22% Similarity=0.411 Sum_probs=31.8
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
..+|||||||+|++|+++|..|++ |.+|+|||+++.
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~ 61 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARA 61 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 457999999999999999999999 999999999874
No 32
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.02 E-value=1.4e-09 Score=112.60 Aligned_cols=60 Identities=13% Similarity=0.110 Sum_probs=45.0
Q ss_pred hhhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCccccHHHHHHhCC
Q 008331 212 LLEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIGSPQLLMLSGV 287 (570)
Q Consensus 212 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl~SGi 287 (570)
+...+++.|++++++++|++|..+++ ++.+|++. +| ++ .++.||+|+|+ +++.|+...|+
T Consensus 180 l~~~~~~~g~~i~~~~~v~~i~~~~~-----~~~~v~~~--~g---~~-----~a~~vV~a~G~-~s~~l~~~~g~ 239 (405)
T 2gag_B 180 FARKANEMGVDIIQNCEVTGFIKDGE-----KVTGVKTT--RG---TI-----HAGKVALAGAG-HSSVLAEMAGF 239 (405)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEESSS-----BEEEEEET--TC---CE-----EEEEEEECCGG-GHHHHHHHHTC
T ss_pred HHHHHHHCCCEEEcCCeEEEEEEeCC-----EEEEEEeC--Cc---eE-----ECCEEEECCch-hHHHHHHHcCC
Confidence 44456668999999999999998765 77777653 55 24 36899999998 56677766544
No 33
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.01 E-value=3e-09 Score=113.53 Aligned_cols=60 Identities=12% Similarity=0.016 Sum_probs=46.4
Q ss_pred hhhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEe-cCCceEEEEecCCCCceEEEcCCccccHHHHH
Q 008331 212 LLEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYD-HVGARHRACLNNGGKNEIILSAGAIGSPQLLM 283 (570)
Q Consensus 212 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~-~~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl 283 (570)
+...+.+.|++|+++++|++|..++ ++.+|.+.+ .+|+...++ ++.||+|+|+ ++..|+.
T Consensus 155 l~~~a~~~Gv~i~~~~~V~~l~~~~------~~~~V~~~d~~~G~~~~i~-----A~~VV~AtG~-~s~~l~~ 215 (501)
T 2qcu_A 155 NAQMVVRKGGEVLTRTRATSARREN------GLWIVEAEDIDTGKKYSWQ-----ARGLVNATGP-WVKQFFD 215 (501)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEEET------TEEEEEEEETTTCCEEEEE-----ESCEEECCGG-GHHHHHH
T ss_pred HHHHHHHcCCEEEcCcEEEEEEEeC------CEEEEEEEECCCCCEEEEE-----CCEEEECCCh-hHHHHHH
Confidence 4445667799999999999998864 467888875 357655664 7999999999 5777765
No 34
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.01 E-value=9.5e-10 Score=116.33 Aligned_cols=52 Identities=15% Similarity=0.231 Sum_probs=40.0
Q ss_pred hhhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCccc
Q 008331 212 LLEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIG 277 (570)
Q Consensus 212 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~ 277 (570)
+...+++.|++++++++| +|+.+++ ++.||.+.+.+|+ + .++.||+|+|++.
T Consensus 125 L~~~~~~~gv~i~~~~~v-~l~~~~~-----~v~Gv~v~~~~g~---~-----~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 125 LLKLAREEGIPIIEDRLV-EIRVKDG-----KVTGFVTEKRGLV---E-----DVDKLVLATGGYS 176 (472)
T ss_dssp HHHHHHHTTCCEECCCEE-EEEEETT-----EEEEEEETTTEEE---C-----CCSEEEECCCCCG
T ss_pred HHHHHHhCCCEEEECcEE-EEEEeCC-----EEEEEEEEeCCCe---E-----EeeeEEECCCCCc
Confidence 444556679999999999 9998765 8999988643332 3 4799999999864
No 35
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.00 E-value=1.4e-09 Score=123.21 Aligned_cols=60 Identities=15% Similarity=0.123 Sum_probs=46.4
Q ss_pred hhhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCccccHHHHHHhCC
Q 008331 212 LLEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIGSPQLLMLSGV 287 (570)
Q Consensus 212 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl~SGi 287 (570)
+...+.+.|++|+++++|++|..+++ ++++|.+. +| ++ .++.||+|+|+ +++.|+...|+
T Consensus 157 L~~~a~~~Gv~i~~~t~V~~i~~~~~-----~v~~V~t~--~G---~i-----~Ad~VV~AaG~-~s~~l~~~~g~ 216 (830)
T 1pj5_A 157 LIKRTESAGVTYRGSTTVTGIEQSGG-----RVTGVQTA--DG---VI-----PADIVVSCAGF-WGAKIGAMIGM 216 (830)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETT-----EEEEEEET--TE---EE-----ECSEEEECCGG-GHHHHHHTTTC
T ss_pred HHHHHHHcCCEEECCceEEEEEEeCC-----EEEEEEEC--Cc---EE-----ECCEEEECCcc-chHHHHHHhCC
Confidence 44566678999999999999998765 77777653 55 34 37999999999 57888776665
No 36
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.00 E-value=3.4e-10 Score=116.39 Aligned_cols=39 Identities=28% Similarity=0.549 Sum_probs=34.0
Q ss_pred CCCCCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 36 APLISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 36 ~~~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
...+.++||||||+|.+|+++|+.|++ |.+|+|||++..
T Consensus 12 ~~~~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~ 51 (382)
T 1ryi_A 12 RAMKRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTM 51 (382)
T ss_dssp --CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSST
T ss_pred hccCCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 334567999999999999999999999 999999999853
No 37
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.99 E-value=1.8e-09 Score=119.55 Aligned_cols=35 Identities=26% Similarity=0.304 Sum_probs=32.2
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
..+||||||+|.+|+++|++|++ |.+|+||||...
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~ 306 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCADEA 306 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 34899999999999999999999 999999999753
No 38
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.96 E-value=1.6e-09 Score=120.26 Aligned_cols=35 Identities=29% Similarity=0.345 Sum_probs=32.5
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
.++||||||+|.+|+++|++|++ |.+|+||||+..
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~ 298 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQ 298 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCc
Confidence 46899999999999999999999 999999999853
No 39
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.92 E-value=5.5e-09 Score=107.56 Aligned_cols=34 Identities=26% Similarity=0.476 Sum_probs=32.1
Q ss_pred cccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
++||||||+|.+|+++|+.|++ |.+|+|||++..
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~ 37 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDP 37 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 6899999999999999999999 999999999864
No 40
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.92 E-value=6.5e-09 Score=107.29 Aligned_cols=63 Identities=11% Similarity=0.076 Sum_probs=45.6
Q ss_pred hhhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCccccHHHHHHhCC
Q 008331 212 LLEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIGSPQLLMLSGV 287 (570)
Q Consensus 212 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl~SGi 287 (570)
+...+.+.|++|+.+++|++|..+++ +++||.+.+ .+...++. ++.||.|+|. +| .+....|+
T Consensus 108 L~~~~~~~gv~i~~~~~v~~i~~~~~-----~v~gv~~~~-~~~~~~~~-----a~~vV~A~G~-~s-~~~~~~g~ 170 (397)
T 3cgv_A 108 LAALAAKAGADVWVKSPALGVIKENG-----KVAGAKIRH-NNEIVDVR-----AKMVIAADGF-ES-EFGRWAGL 170 (397)
T ss_dssp HHHHHHHHTCEEESSCCEEEEEEETT-----EEEEEEEEE-TTEEEEEE-----EEEEEECCCT-TC-HHHHHHTC
T ss_pred HHHHHHhCCCEEEECCEEEEEEEeCC-----EEEEEEEEE-CCeEEEEE-----cCEEEECCCc-ch-HhHHhcCC
Confidence 33455567999999999999998865 899999874 34444554 7999999997 44 44444444
No 41
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.88 E-value=2e-09 Score=110.25 Aligned_cols=35 Identities=29% Similarity=0.515 Sum_probs=32.5
Q ss_pred cccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
+|||||||+|.+|+++|+.|++ |.+|+||||+...
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~ 37 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPP 37 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 5899999999999999999999 9999999998643
No 42
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.87 E-value=4.8e-09 Score=110.34 Aligned_cols=33 Identities=33% Similarity=0.671 Sum_probs=31.2
Q ss_pred CcccEEEECCCCchhHHHHhhhc-c-CeEEEEccC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-N-ATVLLLEKG 72 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g-~~VlvLE~G 72 (570)
.++||||||+|.+|+++|++|++ | .+|+||||.
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~ 56 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAG 56 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccC
Confidence 57999999999999999999999 9 999999993
No 43
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.84 E-value=4.8e-09 Score=108.50 Aligned_cols=34 Identities=32% Similarity=0.602 Sum_probs=32.2
Q ss_pred cccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
+|||||||+|++|+++|..|++ |.+|+||||++.
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~ 38 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKK 38 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 5899999999999999999999 999999999864
No 44
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.83 E-value=1.2e-08 Score=109.15 Aligned_cols=55 Identities=22% Similarity=0.216 Sum_probs=45.2
Q ss_pred hhhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCcc
Q 008331 212 LLEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAI 276 (570)
Q Consensus 212 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~ 276 (570)
+...+.+.|++|+.+++|++|..+++ ++.+|.+.+.+|+..++. ++.||.|+|..
T Consensus 117 L~~~a~~~Gv~i~~~~~V~~v~~~~~-----~v~gv~~~~~dG~~~~i~-----ad~VI~AdG~~ 171 (512)
T 3e1t_A 117 LLRNSERKGVDVRERHEVIDVLFEGE-----RAVGVRYRNTEGVELMAH-----ARFIVDASGNR 171 (512)
T ss_dssp HHHHHHHTTCEEESSCEEEEEEEETT-----EEEEEEEECSSSCEEEEE-----EEEEEECCCTT
T ss_pred HHHHHHhCCCEEEcCCEEEEEEEECC-----EEEEEEEEeCCCCEEEEE-----cCEEEECCCcc
Confidence 34455568999999999999999776 899999987778766664 79999999984
No 45
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.82 E-value=1.6e-08 Score=105.44 Aligned_cols=57 Identities=12% Similarity=0.031 Sum_probs=44.6
Q ss_pred hhhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCccccHHHHH
Q 008331 212 LLEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIGSPQLLM 283 (570)
Q Consensus 212 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl 283 (570)
+...+.+.|++|+++++|++|..+++ +++||.+ +|+ ++ .++.||+|++...+.+||.
T Consensus 202 l~~~~~~~G~~i~~~~~V~~i~~~~~-----~~~gv~~---~g~--~~-----~ad~VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 202 LETVISANGGKIHTGQEVSKILIENG-----KAAGIIA---DDR--IH-----DADLVISNLGHAATAVLCS 258 (425)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETT-----EEEEEEE---TTE--EE-----ECSEEEECSCHHHHHHHTT
T ss_pred HHHHHHHcCCEEEECCceeEEEEECC-----EEEEEEE---CCE--EE-----ECCEEEECCCHHHHHHhcC
Confidence 44556678999999999999999876 8888875 354 34 3799999999987777653
No 46
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.81 E-value=1.3e-08 Score=104.64 Aligned_cols=55 Identities=11% Similarity=0.048 Sum_probs=42.9
Q ss_pred hhhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCcccc
Q 008331 212 LLEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIGS 278 (570)
Q Consensus 212 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~t 278 (570)
+...+.+.|++++.+++|+.+..+++ ++++|.... +|+..+++ ++.||.|.|. +|
T Consensus 108 L~~~a~~~G~~~~~~~~v~~~~~~~~-----~~~~v~~~~-~~~~~~~~-----a~~vIgAdG~-~S 162 (397)
T 3oz2_A 108 LAALAAKAGADVWVKSPALGVIKENG-----KVAGAKIRH-NNEIVDVR-----AKMVIAADGF-ES 162 (397)
T ss_dssp HHHHHHHHTCEEESSCCEEEEEEETT-----EEEEEEEEE-TTEEEEEE-----EEEEEECCCT-TC
T ss_pred HHHHHHhcCcEEeeeeeeeeeeeccc-----eeeeeeecc-cccceEEE-----EeEEEeCCcc-cc
Confidence 34456678999999999999999887 888888774 66666664 6888888886 44
No 47
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.80 E-value=1.1e-08 Score=109.23 Aligned_cols=36 Identities=22% Similarity=0.269 Sum_probs=33.2
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
..++||||||+|++|+.+|+.|++ |++|+||||++.
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~ 141 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE 141 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCc
Confidence 446899999999999999999999 999999999964
No 48
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.80 E-value=3e-09 Score=113.59 Aligned_cols=59 Identities=17% Similarity=0.137 Sum_probs=41.5
Q ss_pred HhhhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCccccHHHHH
Q 008331 211 DLLEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIGSPQLLM 283 (570)
Q Consensus 211 ~~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl 283 (570)
.+.+.+++.|++|+++++|++|+.+++ +++||++. +|+. + .++.||.+++...+-+.|+
T Consensus 226 aL~~~~~~~Gg~I~~~~~V~~I~~~~~-----~~~gV~~~--~g~~--~-----~ad~VV~~a~~~~~~~~Ll 284 (501)
T 4dgk_A 226 GMIKLFQDLGGEVVLNARVSHMETTGN-----KIEAVHLE--DGRR--F-----LTQAVASNADVVHTYRDLL 284 (501)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEEETT-----EEEEEEET--TSCE--E-----ECSCEEECCC---------
T ss_pred HHHHHHHHhCCceeeecceeEEEeeCC-----eEEEEEec--CCcE--E-----EcCEEEECCCHHHHHHHhc
Confidence 355566778999999999999999987 99999875 7764 3 3789999999877766665
No 49
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.80 E-value=6.1e-08 Score=95.28 Aligned_cols=36 Identities=33% Similarity=0.562 Sum_probs=32.7
Q ss_pred CcccEEEECCCCchhHHHHhhhc--cCeEEEEccCCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ--NATVLLLEKGGSP 75 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~--g~~VlvLE~G~~~ 75 (570)
.+|||||||+|++|+.+|..|++ |.+|+||||.+..
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~ 75 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSP 75 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSC
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCC
Confidence 46899999999999999999998 8999999998643
No 50
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.73 E-value=2.6e-08 Score=104.22 Aligned_cols=40 Identities=30% Similarity=0.428 Sum_probs=36.6
Q ss_pred CCCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCCC
Q 008331 38 LISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPYE 77 (570)
Q Consensus 38 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~~ 77 (570)
+.++|||||||+|.+|+++|.+|++ |.+|+||||++...+
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg 57 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGG 57 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCC
Confidence 3567999999999999999999999 999999999987765
No 51
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.73 E-value=4.8e-08 Score=101.69 Aligned_cols=35 Identities=23% Similarity=0.382 Sum_probs=32.5
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
.++||||||+|++|+++|..|++ |.+|+||||...
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~ 39 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKF 39 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCS
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 45899999999999999999999 999999999853
No 52
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.72 E-value=9.9e-08 Score=95.19 Aligned_cols=35 Identities=31% Similarity=0.494 Sum_probs=32.2
Q ss_pred CcccEEEECCCCchhHHHHhhhc---cCeEEEEccCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ---NATVLLLEKGGS 74 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~---g~~VlvLE~G~~ 74 (570)
.+|||||||+|++|+++|+.|++ |++|+|||++..
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~ 115 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVA 115 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCc
Confidence 36899999999999999999998 899999999864
No 53
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.70 E-value=9.4e-08 Score=100.58 Aligned_cols=55 Identities=7% Similarity=0.165 Sum_probs=43.9
Q ss_pred hhhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEec-CCceEEEEecCCCCceEEEcCCcc
Q 008331 212 LLEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDH-VGARHRACLNNGGKNEIILSAGAI 276 (570)
Q Consensus 212 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~-~G~~~~v~~~~~aa~~VVLaaGa~ 276 (570)
+...+.+.|++|+++++|++|..+++ +++||.+.+. +|+..++. ++.||.|.|+.
T Consensus 106 L~~~a~~~gv~i~~~~~v~~i~~~~~-----~v~gv~~~~~~~G~~~~~~-----ad~VV~AdG~~ 161 (453)
T 3atr_A 106 VLKEAQDRGVEIWDLTTAMKPIFEDG-----YVKGAVLFNRRTNEELTVY-----SKVVVEATGYS 161 (453)
T ss_dssp HHHHHHHTTCEEESSEEEEEEEEETT-----EEEEEEEEETTTTEEEEEE-----CSEEEECCGGG
T ss_pred HHHHHHHcCCEEEeCcEEEEEEEECC-----EEEEEEEEEcCCCceEEEE-----cCEEEECcCCc
Confidence 34455557999999999999998776 8999998765 67655664 79999999984
No 54
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.68 E-value=7.4e-08 Score=100.32 Aligned_cols=35 Identities=26% Similarity=0.372 Sum_probs=32.7
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPYE 77 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~~ 77 (570)
||||||||.+|+++|++|++ |.+|+||||.+...+
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG 37 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGG 37 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCc
Confidence 89999999999999999999 999999999987654
No 55
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.66 E-value=6.1e-08 Score=104.98 Aligned_cols=53 Identities=19% Similarity=0.217 Sum_probs=41.6
Q ss_pred hhhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCc
Q 008331 212 LLEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGA 275 (570)
Q Consensus 212 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa 275 (570)
+...+.+.|++++.+++|++|..+++ .+.+|.+.+ +|+..++. ++.||.|+|.
T Consensus 134 L~~~a~~~Gv~i~~g~~V~~v~~~~g-----~~~~V~~~~-~G~~~~i~-----AdlVV~AdG~ 186 (591)
T 3i3l_A 134 LLDEARSRGITVHEETPVTDVDLSDP-----DRVVLTVRR-GGESVTVE-----SDFVIDAGGS 186 (591)
T ss_dssp HHHHHHHTTCEEETTCCEEEEECCST-----TCEEEEEEE-TTEEEEEE-----ESEEEECCGG
T ss_pred HHHHHHhCCCEEEeCCEEEEEEEcCC-----CEEEEEEec-CCceEEEE-----cCEEEECCCC
Confidence 34456668999999999999998754 677888875 67555664 7999999997
No 56
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.56 E-value=2e-07 Score=101.15 Aligned_cols=58 Identities=24% Similarity=0.298 Sum_probs=43.9
Q ss_pred hhhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEe----cCCce-------EEEEecCCCCceEEEcCCcccc
Q 008331 212 LLEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYD----HVGAR-------HRACLNNGGKNEIILSAGAIGS 278 (570)
Q Consensus 212 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~----~~G~~-------~~v~~~~~aa~~VVLaaGa~~t 278 (570)
+...+++.|++|+++++|++|+.++++ +++||.+.+ .+|+. .+++ ++.||+|.|+...
T Consensus 150 L~~~a~~~Gv~i~~g~~v~~l~~~~~g----~V~gV~~~~~g~~~~G~~~~~~~~g~~i~-----Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 150 MGEQAEALGVEVYPGYAAAEILFHEDG----SVKGIATNDVGIQKDGAPKTTFERGLELH-----AKVTIFAEGCHGH 218 (584)
T ss_dssp HHHHHHHTTCEEETTCCEEEEEECTTS----SEEEEEECCEEECTTSCEEEEEECCCEEE-----CSEEEECCCTTCH
T ss_pred HHHHHHHcCCEEEcCCEEEEEEEcCCC----CEEEEEeCCccccCCCCcccccCCceEEE-----CCEEEEeeCCCch
Confidence 344556679999999999999998754 788998863 35542 3453 7999999999654
No 57
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.54 E-value=4.8e-07 Score=89.69 Aligned_cols=35 Identities=31% Similarity=0.486 Sum_probs=31.8
Q ss_pred CcccEEEECCCCchhHHHHhhhc---cCeEEEEccCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ---NATVLLLEKGGS 74 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~---g~~VlvLE~G~~ 74 (570)
.+|||+|||+|++|+++|..|++ |.+|+|+|+++.
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~ 101 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 101 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcc
Confidence 45799999999999999999997 799999999864
No 58
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.53 E-value=4.1e-08 Score=101.79 Aligned_cols=35 Identities=34% Similarity=0.647 Sum_probs=31.9
Q ss_pred CcccEEEECCCCchhHHHHhhhc---cCeEEEEccCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ---NATVLLLEKGGS 74 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~---g~~VlvLE~G~~ 74 (570)
+++||||||+|.+|+++|+.|++ |++|+|||++..
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~ 72 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGL 72 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCS
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 46999999999999999999997 799999999853
No 59
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.53 E-value=5.4e-07 Score=96.91 Aligned_cols=35 Identities=29% Similarity=0.452 Sum_probs=32.9
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
.++||||||+|++|+++|+.|++ |.+|+||||.+.
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~ 39 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPG 39 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 46899999999999999999999 999999999864
No 60
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.52 E-value=3e-07 Score=98.75 Aligned_cols=34 Identities=21% Similarity=0.460 Sum_probs=32.1
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.+|||||||+|.||+.+|..|++ |.+|+|||++.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~ 60 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNA 60 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecc
Confidence 46999999999999999999999 99999999884
No 61
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.52 E-value=2.9e-06 Score=84.34 Aligned_cols=61 Identities=16% Similarity=0.202 Sum_probs=47.3
Q ss_pred cCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEe-cCCceEEEEecCCCCceEEEcCCccccHHHHHHhCC
Q 008331 216 ADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYD-HVGARHRACLNNGGKNEIILSAGAIGSPQLLMLSGV 287 (570)
Q Consensus 216 ~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~-~~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl~SGi 287 (570)
.++.|++++++++|+++..+ + ++.+|++.+ .+|+...+. ++.||+|+|.--+..+|..+|+
T Consensus 200 ~~~~gv~~~~~~~v~~i~~~-~-----~~~~v~~~~~~~g~~~~~~-----~D~vv~a~G~~p~~~~~~~~g~ 261 (323)
T 3f8d_A 200 KKKPNVEFVLNSVVKEIKGD-K-----VVKQVVVENLKTGEIKELN-----VNGVFIEIGFDPPTDFAKSNGI 261 (323)
T ss_dssp HTCTTEEEECSEEEEEEEES-S-----SEEEEEEEETTTCCEEEEE-----CSEEEECCCEECCHHHHHHTTC
T ss_pred HhCCCcEEEeCCEEEEEecc-C-----ceeEEEEEECCCCceEEEE-----cCEEEEEECCCCChhHHhhcCe
Confidence 34569999999999999876 3 677888885 347655564 7999999998777677777765
No 62
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.50 E-value=3.1e-07 Score=92.77 Aligned_cols=33 Identities=27% Similarity=0.393 Sum_probs=30.2
Q ss_pred ccEEEECCCCchhHHHHhhhc----cCeEEEEccCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ----NATVLLLEKGGS 74 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~----g~~VlvLE~G~~ 74 (570)
+||+|||+|++|+++|+.|++ |.+|+|+||++.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~ 38 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADD 38 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCC
Confidence 599999999999999999987 689999999863
No 63
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.47 E-value=4e-07 Score=98.14 Aligned_cols=35 Identities=31% Similarity=0.495 Sum_probs=32.6
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
..+|||||||||.||+.+|..|++ |.+|+|||++.
T Consensus 26 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 61 (651)
T 3ces_A 26 PDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNI 61 (651)
T ss_dssp SSCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecc
Confidence 357999999999999999999999 99999999874
No 64
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.46 E-value=8.2e-07 Score=94.45 Aligned_cols=38 Identities=32% Similarity=0.337 Sum_probs=34.3
Q ss_pred CCCCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 37 PLISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 37 ~~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
...+++||||||+|++|+++|..|++ |.+|+||||.+.
T Consensus 7 ~~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~ 45 (500)
T 2qa1_A 7 HHRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVE 45 (500)
T ss_dssp -CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred CccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 45678999999999999999999999 999999999864
No 65
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.46 E-value=2e-07 Score=93.77 Aligned_cols=34 Identities=26% Similarity=0.390 Sum_probs=31.9
Q ss_pred cccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
++||||||+|++|+++|+.|++ |.+|+||||.+.
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~ 36 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRG 36 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 4799999999999999999999 999999999864
No 66
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.43 E-value=4.4e-07 Score=98.00 Aligned_cols=36 Identities=36% Similarity=0.437 Sum_probs=30.7
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
..+|||||||+|++|+++|+.|++ |.+|+||||.+.
T Consensus 47 ~~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~ 83 (570)
T 3fmw_A 47 ALTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVE 83 (570)
T ss_dssp ----CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence 346999999999999999999999 999999999864
No 67
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.40 E-value=1.2e-06 Score=87.38 Aligned_cols=64 Identities=19% Similarity=0.236 Sum_probs=46.8
Q ss_pred hhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEe-cCCceEEEEecCCCCceEEEcCCccccHHHHHHhCC
Q 008331 214 EYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYD-HVGARHRACLNNGGKNEIILSAGAIGSPQLLMLSGV 287 (570)
Q Consensus 214 ~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~-~~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl~SGi 287 (570)
+.+.+.|++++++++|++|..+++ ++.+|.+.+ .+|+..++ .++.||+|+|..-.+.+|..+|+
T Consensus 198 ~~l~~~gv~i~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~l~~~gl 262 (319)
T 3cty_A 198 QEIKKRNIPYIMNAQVTEIVGDGK-----KVTGVKYKDRTTGEEKLI-----ETDGVFIYVGLIPQTSFLKDSGV 262 (319)
T ss_dssp HHHHHTTCCEECSEEEEEEEESSS-----SEEEEEEEETTTCCEEEE-----CCSEEEECCCEEECCGGGTTSCC
T ss_pred HHHhcCCcEEEcCCeEEEEecCCc-----eEEEEEEEEcCCCceEEE-----ecCEEEEeeCCccChHHHhhccc
Confidence 334467999999999999987654 688898875 35765555 47999999997655555554443
No 68
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.38 E-value=1.3e-06 Score=92.77 Aligned_cols=37 Identities=32% Similarity=0.372 Sum_probs=33.0
Q ss_pred CCCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 38 LISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 38 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
.+.++||||||+|++|+++|..|++ |.+|+||||.+.
T Consensus 9 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~ 46 (499)
T 2qa2_A 9 HRSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQ 46 (499)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSS
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 3567999999999999999999999 999999999864
No 69
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.38 E-value=1e-06 Score=91.54 Aligned_cols=62 Identities=15% Similarity=0.127 Sum_probs=48.6
Q ss_pred hhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCccccHHHHHHhCCC
Q 008331 213 LEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIGSPQLLMLSGVG 288 (570)
Q Consensus 213 l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl~SGiG 288 (570)
....++.|+++++++.|++|..+++ ++++|++. +|+. + .++.||+|+|..-...+|..+|+-
T Consensus 201 ~~~l~~~GV~i~~~~~v~~i~~~~~-----~v~~v~l~--dG~~--i-----~aD~Vv~a~G~~p~~~l~~~~gl~ 262 (415)
T 3lxd_A 201 QAEHRAHGVDLRTGAAMDCIEGDGT-----KVTGVRMQ--DGSV--I-----PADIVIVGIGIVPCVGALISAGAS 262 (415)
T ss_dssp HHHHHHTTCEEEETCCEEEEEESSS-----BEEEEEES--SSCE--E-----ECSEEEECSCCEESCHHHHHTTCC
T ss_pred HHHHHhCCCEEEECCEEEEEEecCC-----cEEEEEeC--CCCE--E-----EcCEEEECCCCccChHHHHhCCCC
Confidence 3455678999999999999988665 78888875 6653 4 379999999987777788777763
No 70
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.37 E-value=2.1e-06 Score=86.09 Aligned_cols=55 Identities=9% Similarity=0.119 Sum_probs=41.8
Q ss_pred CCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEec-CCceEEEEecCCCCceEEEcCCccccHHH
Q 008331 217 DPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDH-VGARHRACLNNGGKNEIILSAGAIGSPQL 281 (570)
Q Consensus 217 ~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~-~G~~~~v~~~~~aa~~VVLaaGa~~tp~L 281 (570)
++.|+++++++.|++|..+++ ++.+|.+.+. +|+..++. ++.||+|+|..-++.+
T Consensus 220 ~~~gv~i~~~~~v~~i~~~~~-----~~~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~ 275 (338)
T 3itj_A 220 KNEKIEILYNTVALEAKGDGK-----LLNALRIKNTKKNEETDLP-----VSGLFYAIGHTPATKI 275 (338)
T ss_dssp HCTTEEEECSEEEEEEEESSS-----SEEEEEEEETTTTEEEEEE-----CSEEEECSCEEECCGG
T ss_pred hcCCeEEeecceeEEEEcccC-----cEEEEEEEECCCCceEEEE-----eCEEEEEeCCCCChhH
Confidence 345999999999999988765 7889999863 35445553 7999999997544433
No 71
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.36 E-value=4.1e-07 Score=91.92 Aligned_cols=34 Identities=26% Similarity=0.491 Sum_probs=31.9
Q ss_pred cccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
.|||||||+|++|+.+|..|++ |.+|+|+|+.+.
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~ 37 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEAS 37 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 5899999999999999999999 999999998863
No 72
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.35 E-value=1.4e-06 Score=90.06 Aligned_cols=38 Identities=21% Similarity=0.244 Sum_probs=32.4
Q ss_pred CCCCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 37 PLISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 37 ~~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
...+.|||||||+|++|+++|..|++ |.+|+||||.+.
T Consensus 19 ~~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~ 57 (407)
T 3rp8_A 19 YFQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKE 57 (407)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 34567999999999999999999999 999999999864
No 73
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.35 E-value=8.4e-07 Score=95.62 Aligned_cols=35 Identities=31% Similarity=0.593 Sum_probs=32.1
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
...|||||||+|.||+.+|..|++ |.+|+|||+..
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 54 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDL 54 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecc
Confidence 457999999999999999999999 99999999874
No 74
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.33 E-value=3.5e-07 Score=97.26 Aligned_cols=36 Identities=31% Similarity=0.410 Sum_probs=33.2
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
...+||+|||+|++|+++|..|++ |.+|+|||+.+.
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~ 126 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIK 126 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSS
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccc
Confidence 457899999999999999999999 999999999863
No 75
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.30 E-value=1.8e-06 Score=89.04 Aligned_cols=35 Identities=29% Similarity=0.413 Sum_probs=32.4
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
.++||||||+|++|+++|..|++ |.+|+|+||.+.
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~ 40 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARR 40 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 46899999999999999999999 999999999853
No 76
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.30 E-value=2.7e-07 Score=89.11 Aligned_cols=35 Identities=26% Similarity=0.383 Sum_probs=32.8
Q ss_pred cccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
++||+|||||++|+++|+.|++ |++|+||||.+..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 5899999999999999999999 9999999998754
No 77
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.28 E-value=5.3e-06 Score=85.72 Aligned_cols=62 Identities=10% Similarity=0.110 Sum_probs=48.7
Q ss_pred hhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCccccHHHHHHhCCC
Q 008331 213 LEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIGSPQLLMLSGVG 288 (570)
Q Consensus 213 l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl~SGiG 288 (570)
....++.|+++++++.|++|..+++ ++.+|+.. +|+. + .++.||+|+|..-...++..+|+-
T Consensus 191 ~~~l~~~GV~i~~~~~v~~i~~~~~-----~v~~V~~~--dG~~--i-----~aD~Vv~a~G~~p~~~l~~~~gl~ 252 (404)
T 3fg2_P 191 HDRHSGAGIRMHYGVRATEIAAEGD-----RVTGVVLS--DGNT--L-----PCDLVVVGVGVIPNVEIAAAAGLP 252 (404)
T ss_dssp HHHHHHTTCEEECSCCEEEEEEETT-----EEEEEEET--TSCE--E-----ECSEEEECCCEEECCHHHHHTTCC
T ss_pred HHHHHhCCcEEEECCEEEEEEecCC-----cEEEEEeC--CCCE--E-----EcCEEEECcCCccCHHHHHhCCCC
Confidence 3455678999999999999988765 78888875 6753 4 379999999987777788777763
No 78
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.24 E-value=8e-06 Score=84.12 Aligned_cols=35 Identities=26% Similarity=0.316 Sum_probs=32.4
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
..+||+|||+|++|+++|..|++ |.+|+|+||.+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 45899999999999999999999 999999999853
No 79
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.22 E-value=2.3e-06 Score=91.95 Aligned_cols=36 Identities=25% Similarity=0.403 Sum_probs=32.7
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
...+||||||+|++|+.+|.+|++ |.+|+|+|+++.
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~ 55 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASG 55 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 457999999999999999999999 999999999864
No 80
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.22 E-value=1.7e-06 Score=92.87 Aligned_cols=35 Identities=20% Similarity=0.331 Sum_probs=32.4
Q ss_pred CcccEEEECCCCchhHHHHhhh-c-cCeEEEEccCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLS-Q-NATVLLLEKGGS 74 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La-~-g~~VlvLE~G~~ 74 (570)
..+||||||+|++|+.+|.+|+ + |.+|+|+|+.+.
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~ 43 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADG 43 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCC
Confidence 4689999999999999999999 8 999999999864
No 81
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.21 E-value=3.1e-06 Score=87.04 Aligned_cols=33 Identities=27% Similarity=0.399 Sum_probs=31.4
Q ss_pred cccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
++||||||+|++|+++|..|++ |.+|+|+||.+
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 35 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQT 35 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 5899999999999999999999 99999999975
No 82
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.19 E-value=6.9e-06 Score=88.41 Aligned_cols=36 Identities=31% Similarity=0.458 Sum_probs=33.1
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
..++||||||+|++|+++|..|++ |.+|+||||.+.
T Consensus 24 ~~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~ 60 (549)
T 2r0c_A 24 PIETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDG 60 (549)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 456899999999999999999999 999999999863
No 83
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.17 E-value=3.5e-06 Score=90.62 Aligned_cols=37 Identities=27% Similarity=0.362 Sum_probs=33.6
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
..++||||||+|++|+.+|.+|++ |.+|+|+|+++..
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~ 51 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDV 51 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 347999999999999999999999 9999999998643
No 84
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.16 E-value=7.4e-06 Score=86.21 Aligned_cols=36 Identities=39% Similarity=0.427 Sum_probs=33.3
Q ss_pred CcccEEEECCCCchhHHHHhhhc-c-----CeEEEEccCCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-N-----ATVLLLEKGGSP 75 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g-----~~VlvLE~G~~~ 75 (570)
+.|||||||+|++|+++|..|++ | .+|+|||+.+..
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~ 70 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDY 70 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCC
Confidence 56899999999999999999999 8 999999998754
No 85
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.15 E-value=2.5e-06 Score=84.58 Aligned_cols=56 Identities=14% Similarity=0.046 Sum_probs=44.1
Q ss_pred cCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCccccHHH
Q 008331 216 ADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIGSPQL 281 (570)
Q Consensus 216 ~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~tp~L 281 (570)
.++.|++++++++|++|..+++ ++.+|.+...+|+..++ .++.||+|+|..-.+.+
T Consensus 193 ~~~~gv~~~~~~~v~~i~~~~~-----~~~~v~~~~~~g~~~~~-----~~D~vv~a~G~~p~~~~ 248 (315)
T 3r9u_A 193 KKNEKIELITSASVDEVYGDKM-----GVAGVKVKLKDGSIRDL-----NVPGIFTFVGLNVRNEI 248 (315)
T ss_dssp HHCTTEEEECSCEEEEEEEETT-----EEEEEEEECTTSCEEEE-----CCSCEEECSCEEECCGG
T ss_pred HhcCCeEEEeCcEEEEEEcCCC-----cEEEEEEEcCCCCeEEe-----ecCeEEEEEcCCCCchh
Confidence 3578999999999999988765 88899888557776566 47999999996544333
No 86
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.12 E-value=3.2e-06 Score=84.44 Aligned_cols=34 Identities=32% Similarity=0.380 Sum_probs=31.9
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
..+||||||+|++|+.+|..|++ |.+|+|+|+.+
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 40 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLP 40 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 35899999999999999999999 99999999986
No 87
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.12 E-value=5.6e-06 Score=82.97 Aligned_cols=34 Identities=18% Similarity=0.213 Sum_probs=31.9
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
..+||||||+|++|+.+|..|++ |.+|+|+|+.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 38 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLP 38 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 46899999999999999999999 99999999875
No 88
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.11 E-value=5.1e-06 Score=87.07 Aligned_cols=37 Identities=38% Similarity=0.509 Sum_probs=33.3
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cC--eEEEEccCCCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NA--TVLLLEKGGSPY 76 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~--~VlvLE~G~~~~ 76 (570)
..+||+|||+|++|+++|..|++ |. +|+|+|+.+...
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~G 44 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPG 44 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCC
Confidence 46899999999999999999999 98 999999986543
No 89
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.09 E-value=4.6e-06 Score=89.51 Aligned_cols=36 Identities=28% Similarity=0.413 Sum_probs=32.9
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
...+||||||+|++|+.+|.+|++ |.+|+|+|+++.
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~ 43 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGED 43 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 346899999999999999999999 999999999863
No 90
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.04 E-value=1.9e-05 Score=82.28 Aligned_cols=61 Identities=15% Similarity=0.150 Sum_probs=45.1
Q ss_pred hhhcCCCCeEEEecceEEEEEe--cCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCccccHHHHHHhCC
Q 008331 213 LEYADPEKLTVYLRAVVQRIKF--TETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIGSPQLLMLSGV 287 (570)
Q Consensus 213 l~~~~~~g~~i~~~~~V~~i~~--~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl~SGi 287 (570)
....++.|++++++++|++|.. +++ ++.+|++. +|+. + .++.||+|+|.--...+|..+|+
T Consensus 198 ~~~l~~~GV~i~~~~~v~~i~~~~~~~-----~v~~v~~~--~G~~--i-----~~D~Vv~a~G~~p~~~l~~~~gl 260 (431)
T 1q1r_A 198 EHLHREAGVDIRTGTQVCGFEMSTDQQ-----KVTAVLCE--DGTR--L-----PADLVIAGIGLIPNCELASAAGL 260 (431)
T ss_dssp HHHHHHHTCEEECSCCEEEEEECTTTC-----CEEEEEET--TSCE--E-----ECSEEEECCCEEECCHHHHHTTC
T ss_pred HHHHHhCCeEEEeCCEEEEEEeccCCC-----cEEEEEeC--CCCE--E-----EcCEEEECCCCCcCcchhhccCC
Confidence 3445567999999999999986 333 67777764 6643 4 37999999997655567777776
No 91
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.03 E-value=1.6e-05 Score=83.68 Aligned_cols=34 Identities=24% Similarity=0.318 Sum_probs=30.6
Q ss_pred ccEEEECCCCchhHHHHhhhc----cCe---EEEEccCCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ----NAT---VLLLEKGGSP 75 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~----g~~---VlvLE~G~~~ 75 (570)
+||+|||||++|+++|..|++ |.+ |+|+|+.+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~ 43 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADW 43 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCC
Confidence 699999999999999999986 788 9999998654
No 92
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.01 E-value=1.9e-06 Score=85.36 Aligned_cols=35 Identities=20% Similarity=0.511 Sum_probs=31.5
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.+.|||||||||+||+++|.+|++ |++|+|+|++.
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~ 39 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT 39 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 457999999999999999999999 99999999874
No 93
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=97.99 E-value=2.7e-06 Score=85.23 Aligned_cols=37 Identities=32% Similarity=0.492 Sum_probs=33.0
Q ss_pred CcccEEEECCCCchhHHHHhhhc---cCeEEEEccCCCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ---NATVLLLEKGGSPY 76 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~---g~~VlvLE~G~~~~ 76 (570)
.++||+|||||+||+++|++|++ |++|+|+||++...
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~G 103 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCC
Confidence 46899999999999999999974 89999999987654
No 94
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.98 E-value=2.6e-06 Score=84.65 Aligned_cols=34 Identities=29% Similarity=0.510 Sum_probs=31.9
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.+|||||||+|+||+++|.+|++ |++|+|+||+.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~ 39 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI 39 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 47999999999999999999999 99999999864
No 95
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.95 E-value=2.8e-06 Score=84.31 Aligned_cols=35 Identities=20% Similarity=0.239 Sum_probs=32.4
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.+.|||||||+|+||+++|.+|++ |++|+|+|++.
T Consensus 2 ~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~ 37 (314)
T 4a5l_A 2 SNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM 37 (314)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 346999999999999999999999 99999999875
No 96
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.93 E-value=4.4e-06 Score=87.72 Aligned_cols=40 Identities=30% Similarity=0.430 Sum_probs=36.6
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPYEN 78 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~~~ 78 (570)
..++||||||+|.+|+++|.+|++ |++|+||||.+..++.
T Consensus 9 ~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~ 49 (453)
T 2bcg_G 9 DTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGE 49 (453)
T ss_dssp CCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCcc
Confidence 457999999999999999999999 9999999999887653
No 97
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.92 E-value=3.6e-06 Score=89.72 Aligned_cols=39 Identities=21% Similarity=0.383 Sum_probs=35.5
Q ss_pred CCcccEEEECCCCchhHHHHhhhc--cCeEEEEccCCCCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ--NATVLLLEKGGSPYE 77 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~--g~~VlvLE~G~~~~~ 77 (570)
+.++||||||||.+|+++|++|++ |.+|+|||+.+..++
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG 48 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGG 48 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCG
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcC
Confidence 447999999999999999999986 899999999988765
No 98
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.87 E-value=1.2e-05 Score=85.96 Aligned_cols=35 Identities=34% Similarity=0.503 Sum_probs=31.3
Q ss_pred CcccEEEECCCCchhHHHHhhhc-------------cCeEEEEccCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-------------NATVLLLEKGGS 74 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-------------g~~VlvLE~G~~ 74 (570)
..+||||||+|++|+++|..|++ |.+|+|||+...
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~ 53 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDV 53 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCC
Confidence 46899999999999999999987 689999999754
No 99
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.83 E-value=0.00025 Score=74.67 Aligned_cols=61 Identities=18% Similarity=0.131 Sum_probs=44.3
Q ss_pred hhhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCccccHHHHHHhCC
Q 008331 212 LLEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIGSPQLLMLSGV 287 (570)
Q Consensus 212 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl~SGi 287 (570)
+...+++.|++++++++|++|..+++ ++. |.+. +|+ ++ .++.||+|+|..-.+.|+..+|+
T Consensus 208 l~~~l~~~GV~i~~~~~v~~i~~~~~-----~v~-v~~~--~g~--~i-----~aD~Vv~a~G~~p~~~l~~~~gl 268 (472)
T 3iwa_A 208 LRHDLEKNDVVVHTGEKVVRLEGENG-----KVA-RVIT--DKR--TL-----DADLVILAAGVSPNTQLARDAGL 268 (472)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEESSS-----BEE-EEEE--SSC--EE-----ECSEEEECSCEEECCHHHHHHTC
T ss_pred HHHHHHhcCCEEEeCCEEEEEEccCC-----eEE-EEEe--CCC--EE-----EcCEEEECCCCCcCHHHHHhCCc
Confidence 33455678999999999999987554 554 5554 565 34 37999999998755567766665
No 100
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.80 E-value=1.5e-05 Score=84.70 Aligned_cols=39 Identities=21% Similarity=0.183 Sum_probs=30.4
Q ss_pred CCCCCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 36 APLISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 36 ~~~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
.+.++-|||||||+|++|+++|..|.+ |...+++|++..
T Consensus 34 tp~~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~ 73 (501)
T 4b63_A 34 TPQDELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNI 73 (501)
T ss_dssp CCTTSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC---
T ss_pred CCCCCcCcEEEEcccHHHHHHHHHHHhcCCCceEEecccc
Confidence 344567999999999999999999988 777777776653
No 101
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=97.79 E-value=7.9e-06 Score=85.07 Aligned_cols=36 Identities=47% Similarity=0.634 Sum_probs=32.9
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPYE 77 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~~ 77 (570)
|||||||+|++|+++|++|++ |.+|+|||+.+...+
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG 38 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGG 38 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBT
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccC
Confidence 799999999999999999999 999999999765543
No 102
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.78 E-value=0.00017 Score=74.54 Aligned_cols=59 Identities=17% Similarity=0.052 Sum_probs=44.6
Q ss_pred hhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCccccHHHHHHhCC
Q 008331 214 EYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIGSPQLLMLSGV 287 (570)
Q Consensus 214 ~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl~SGi 287 (570)
...++.|+++++++.|++|..++ ++.+|+.. +|+. + .++.||+|+|..-...+|..+|+
T Consensus 193 ~~l~~~GV~i~~~~~v~~i~~~~------~~~~v~~~--dg~~--i-----~aD~Vv~a~G~~p~~~l~~~~gl 251 (410)
T 3ef6_A 193 GLLTELGVQVELGTGVVGFSGEG------QLEQVMAS--DGRS--F-----VADSALICVGAEPADQLARQAGL 251 (410)
T ss_dssp HHHHHHTCEEECSCCEEEEECSS------SCCEEEET--TSCE--E-----ECSEEEECSCEEECCHHHHHTTC
T ss_pred HHHHHCCCEEEeCCEEEEEeccC------cEEEEEEC--CCCE--E-----EcCEEEEeeCCeecHHHHHhCCC
Confidence 34566799999999999997643 45567664 6653 3 37999999998777678877776
No 103
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.77 E-value=1.1e-05 Score=81.94 Aligned_cols=36 Identities=22% Similarity=0.298 Sum_probs=33.2
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
..++||||||+|.+|+++|++|++ |.+|+||||...
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~ 40 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLP 40 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCC
Confidence 457899999999999999999999 999999999863
No 104
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=97.69 E-value=1.6e-05 Score=75.25 Aligned_cols=33 Identities=39% Similarity=0.442 Sum_probs=31.4
Q ss_pred cccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
+|||||||+|++|+.+|..|++ |.+|+|||++.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~ 36 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSL 36 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 6899999999999999999999 99999999984
No 105
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.68 E-value=1.9e-05 Score=81.25 Aligned_cols=39 Identities=31% Similarity=0.466 Sum_probs=33.9
Q ss_pred CCCCCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 36 APLISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 36 ~~~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
+....++||||||+|++|+++|..|++ |.+|+|+||.+.
T Consensus 21 M~~~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 21 MNLLSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDND 60 (398)
T ss_dssp --CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSS
T ss_pred ccccCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 444567999999999999999999999 999999999864
No 106
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.65 E-value=2e-05 Score=84.09 Aligned_cols=46 Identities=28% Similarity=0.461 Sum_probs=35.3
Q ss_pred eeeecccCCCCCCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 28 TFVKDATSAPLISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 28 ~~~~~~~~~~~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
+++.....++...+|||||||+|++|+++|.+|++ |++|+|+|+.+
T Consensus 19 ~~m~~~~~~~~~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 19 SHMNGPEDLPKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp -------CCCSSCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCcccccCcCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 34444555556678999999999999999999999 99999999964
No 107
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.65 E-value=2.3e-05 Score=80.23 Aligned_cols=40 Identities=30% Similarity=0.463 Sum_probs=35.7
Q ss_pred CCCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCCC
Q 008331 38 LISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPYE 77 (570)
Q Consensus 38 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~~ 77 (570)
....+||+|||+|++|+++|.+|++ |.+|+|||+.+...+
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG 66 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGG 66 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSG
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCC
Confidence 3457999999999999999999999 999999999876654
No 108
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.63 E-value=2.1e-05 Score=82.97 Aligned_cols=42 Identities=29% Similarity=0.400 Sum_probs=33.8
Q ss_pred CCCCCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCCC
Q 008331 36 APLISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPYE 77 (570)
Q Consensus 36 ~~~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~~ 77 (570)
++....+||||||+|.+|+++|+.|++ |.+|+|||+.+...+
T Consensus 11 ~~~~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GG 53 (478)
T 2ivd_A 11 MPRTTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGG 53 (478)
T ss_dssp ------CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBT
T ss_pred CCCCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCc
Confidence 455667899999999999999999999 999999999987654
No 109
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.63 E-value=2.2e-05 Score=82.90 Aligned_cols=35 Identities=29% Similarity=0.427 Sum_probs=32.8
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
++|||||||+|++|+++|.+|++ |++|+|+||++.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~ 37 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKG 37 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCc
Confidence 46999999999999999999999 999999999863
No 110
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.62 E-value=2.4e-05 Score=79.57 Aligned_cols=37 Identities=43% Similarity=0.600 Sum_probs=33.7
Q ss_pred cccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPYE 77 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~~ 77 (570)
++|++|||+|.+|+++|.+|++ |.+|+|+|+++...+
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG 38 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGG 38 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSG
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCc
Confidence 3799999999999999999999 999999999876554
No 111
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.61 E-value=3.2e-05 Score=80.24 Aligned_cols=39 Identities=21% Similarity=0.218 Sum_probs=35.1
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-c-CeEEEEccCCCCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-N-ATVLLLEKGGSPYE 77 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g-~~VlvLE~G~~~~~ 77 (570)
.+++||||||||.+|+++|++|++ | .+|+|+|+.+...+
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG 44 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGG 44 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSST
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCC
Confidence 356899999999999999999999 9 89999999887654
No 112
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.60 E-value=2.6e-05 Score=78.73 Aligned_cols=31 Identities=13% Similarity=0.254 Sum_probs=29.8
Q ss_pred cEEEECCCCchhHHHHhhhc-c------CeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-N------ATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g------~~VlvLE~G~ 73 (570)
||||||+|.+|+++|+.|++ | .+|+|||++.
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 89999999999999999999 9 8999999985
No 113
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.60 E-value=3e-05 Score=79.91 Aligned_cols=39 Identities=26% Similarity=0.416 Sum_probs=35.1
Q ss_pred CCcccEEEECCCCchhHHHHhhhc--cCeEEEEccCCCCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ--NATVLLLEKGGSPYE 77 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~--g~~VlvLE~G~~~~~ 77 (570)
.+++||||||+|.+|+++|++|++ |.+|+|||+.+..++
T Consensus 5 ~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG 45 (399)
T 1v0j_A 5 TARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGG 45 (399)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSG
T ss_pred cccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCC
Confidence 457999999999999999999998 799999999987654
No 114
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.58 E-value=2.9e-05 Score=83.01 Aligned_cols=38 Identities=32% Similarity=0.434 Sum_probs=34.5
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPYE 77 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~~ 77 (570)
..+||||||||.+|+++|.+|++ |.+|+|||+.+...+
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 41 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGG 41 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBT
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 45799999999999999999999 999999999877644
No 115
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.56 E-value=4.1e-05 Score=81.12 Aligned_cols=39 Identities=26% Similarity=0.327 Sum_probs=35.5
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPYE 77 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~~ 77 (570)
.+.+||+|||+|.+|+++|++|++ |.+|+|||+.+...+
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG 48 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGG 48 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCC
Confidence 356899999999999999999999 999999999987655
No 116
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.56 E-value=4.2e-05 Score=79.69 Aligned_cols=40 Identities=25% Similarity=0.390 Sum_probs=36.2
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPYEN 78 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~~~ 78 (570)
.+++|+||||+|.+|+++|.+|++ |.+|+|+|+.+...+.
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~ 44 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGE 44 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTT
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCcccc
Confidence 457999999999999999999999 9999999999876653
No 117
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.54 E-value=2.8e-05 Score=81.67 Aligned_cols=37 Identities=22% Similarity=0.275 Sum_probs=33.8
Q ss_pred cccEEEECCCCchhHHHHhhhc-c------CeEEEEccCCCCCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-N------ATVLLLEKGGSPYE 77 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g------~~VlvLE~G~~~~~ 77 (570)
.+||||||||.+|+++|++|++ | .+|+|||+.+...+
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG 48 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGG 48 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCT
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCc
Confidence 5899999999999999999999 9 99999999876553
No 118
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.54 E-value=3.5e-05 Score=79.67 Aligned_cols=35 Identities=34% Similarity=0.443 Sum_probs=32.0
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCe-EEEEccCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NAT-VLLLEKGGS 74 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~-VlvLE~G~~ 74 (570)
.++||||||+|++|+++|..|++ |.+ |+||||.+.
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~ 39 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSE 39 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 35899999999999999999999 999 999999864
No 119
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.53 E-value=3.5e-05 Score=81.57 Aligned_cols=33 Identities=21% Similarity=0.358 Sum_probs=31.3
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCeEEEEccC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
.+|||||||+|++|+++|.+|++ |++|+|+||+
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~ 58 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEY 58 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC
Confidence 46999999999999999999999 9999999994
No 120
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.52 E-value=4.8e-05 Score=77.20 Aligned_cols=38 Identities=24% Similarity=0.253 Sum_probs=34.4
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccC-CCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKG-GSPY 76 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G-~~~~ 76 (570)
...+||+|||+|++|+++|++|++ |.+|+|||+. +...
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vG 81 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVG 81 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCB
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccC
Confidence 457899999999999999999999 9999999999 6544
No 121
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.52 E-value=3.2e-05 Score=82.58 Aligned_cols=38 Identities=32% Similarity=0.378 Sum_probs=34.8
Q ss_pred CcccEEEECCCCchhHHHHhhhc-c-CeEEEEccCCCCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-N-ATVLLLEKGGSPYE 77 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g-~~VlvLE~G~~~~~ 77 (570)
..+||||||||.+|+++|++|++ | .+|+|||+.+..++
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGG 46 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGG 46 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBT
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCC
Confidence 45899999999999999999999 9 99999999987665
No 122
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.50 E-value=3.5e-05 Score=81.67 Aligned_cols=38 Identities=29% Similarity=0.431 Sum_probs=32.4
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPY 76 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~ 76 (570)
..+|||||||+|++|+++|.+|++ |.+|+|+||.+...
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~G 61 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYG 61 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 346999999999999999999999 99999999876543
No 123
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.50 E-value=4.6e-05 Score=77.81 Aligned_cols=35 Identities=31% Similarity=0.302 Sum_probs=32.5
Q ss_pred cccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
.+||||||+|++|+++|..|++ |.+|+|+||.+..
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~ 46 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSEL 46 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCC
Confidence 5899999999999999999999 9999999998643
No 124
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.50 E-value=3.7e-05 Score=80.94 Aligned_cols=36 Identities=28% Similarity=0.472 Sum_probs=32.7
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
.+|||||||+|++|+++|.+|++ |.+|+|+||.+..
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~ 39 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGEL 39 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSS
T ss_pred ccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCC
Confidence 36999999999999999999999 9999999976644
No 125
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.49 E-value=3.8e-05 Score=81.46 Aligned_cols=38 Identities=29% Similarity=0.406 Sum_probs=34.6
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPYE 77 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~~ 77 (570)
+++||||||+|.+|+++|.+|++ |.+|+|||+.+...+
T Consensus 38 ~~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG 76 (495)
T 2vvm_A 38 GPWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGG 76 (495)
T ss_dssp CCEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBT
T ss_pred cCCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 45899999999999999999999 999999999876654
No 126
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.49 E-value=4.2e-05 Score=81.66 Aligned_cols=33 Identities=36% Similarity=0.655 Sum_probs=31.4
Q ss_pred cccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
+||+||||+|++|.++|.++++ |+||+|+|+..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~ 75 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVK 75 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccc
Confidence 6999999999999999999999 99999999865
No 127
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.47 E-value=4.6e-05 Score=79.77 Aligned_cols=38 Identities=29% Similarity=0.323 Sum_probs=34.5
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPYE 77 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~~ 77 (570)
.++||||||+|.+|+++|.+|++ |.+|+|||+.+...+
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG 42 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGG 42 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCC
Confidence 36899999999999999999999 999999999877654
No 128
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.46 E-value=5.2e-05 Score=79.96 Aligned_cols=36 Identities=28% Similarity=0.406 Sum_probs=32.9
Q ss_pred ccEEEECCCCchhHHHHhhhc-cC--eEEEEccCCCCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NA--TVLLLEKGGSPYE 77 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~--~VlvLE~G~~~~~ 77 (570)
+||||||||.+|+++|++|++ |. +|+|||+.+...+
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG 41 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGG 41 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBT
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCC
Confidence 699999999999999999999 98 9999999876543
No 129
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.46 E-value=5.1e-05 Score=79.81 Aligned_cols=33 Identities=24% Similarity=0.417 Sum_probs=31.2
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCeEEEEccC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
.+|||||||+|++|+++|.+|++ |.+|+|+||+
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~ 37 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEF 37 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 36999999999999999999999 9999999994
No 130
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.46 E-value=4.9e-05 Score=75.75 Aligned_cols=34 Identities=38% Similarity=0.670 Sum_probs=31.9
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
...+||+|||+|++|+.+|..|++ |.+|+|+|+.
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 40 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG 40 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC
Confidence 346899999999999999999999 9999999997
No 131
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.44 E-value=6.1e-05 Score=76.24 Aligned_cols=37 Identities=24% Similarity=0.288 Sum_probs=33.0
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
.+.+||||||+|++|+++|..|++ |++|+|+|+.+..
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~ 49 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQL 49 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 346999999999999999999999 9999999998643
No 132
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.44 E-value=6.7e-05 Score=79.71 Aligned_cols=39 Identities=26% Similarity=0.283 Sum_probs=34.5
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPYE 77 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~~ 77 (570)
.+.+||||||+|.+|+++|++|++ |.+|+|||+.+...+
T Consensus 11 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG 50 (504)
T 1sez_A 11 SSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGG 50 (504)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCC
Confidence 346899999999999999999999 999999999987654
No 133
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.43 E-value=5.4e-05 Score=80.08 Aligned_cols=34 Identities=32% Similarity=0.432 Sum_probs=31.6
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
..+|||||||+|++|+++|.+|++ |++|+|+||+
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 457999999999999999999999 9999999964
No 134
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.42 E-value=5.8e-05 Score=73.84 Aligned_cols=33 Identities=33% Similarity=0.640 Sum_probs=31.1
Q ss_pred cccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.|||+|||+|++|+.+|..|++ |.+|+|+|++.
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 4899999999999999999999 99999999875
No 135
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.42 E-value=5.4e-05 Score=80.25 Aligned_cols=33 Identities=30% Similarity=0.467 Sum_probs=31.6
Q ss_pred cccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
+||+||||+|++|+++|.+|++ |++|+|+|++.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 5999999999999999999999 99999999975
No 136
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.41 E-value=5e-05 Score=80.20 Aligned_cols=35 Identities=29% Similarity=0.630 Sum_probs=32.5
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
...|||||||+|++|+++|.+|++ |++|+|+|++.
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~ 53 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESHK 53 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 457999999999999999999999 99999999874
No 137
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.41 E-value=5e-05 Score=79.06 Aligned_cols=34 Identities=29% Similarity=0.293 Sum_probs=30.9
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
..+||||||+|++|+++|..|++ |.+|+||||.+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 35799999999999999999999 99999999975
No 138
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.40 E-value=5.5e-05 Score=80.13 Aligned_cols=34 Identities=24% Similarity=0.447 Sum_probs=31.8
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
..+|||||||+|++|+++|.+|++ |.+|+|+||.
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~ 38 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYV 38 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEec
Confidence 457999999999999999999999 9999999984
No 139
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.40 E-value=6.6e-05 Score=67.81 Aligned_cols=32 Identities=44% Similarity=0.728 Sum_probs=30.8
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
||++|||+|++|+.+|..|++ |.+|+|+|+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 799999999999999999999 99999999986
No 140
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.37 E-value=0.00047 Score=71.61 Aligned_cols=57 Identities=16% Similarity=0.209 Sum_probs=41.8
Q ss_pred hcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCccccHHHHHHhCC
Q 008331 215 YADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIGSPQLLMLSGV 287 (570)
Q Consensus 215 ~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl~SGi 287 (570)
..++.|+++++++.|+++. .+ ++.+.+.+|...++. ++.||+++|.-. +.++..+|.
T Consensus 209 ~l~~~GV~~~~~~~v~~v~--~~--------~~~~~~~~g~~~~i~-----~d~vi~~~G~~~-~~~~~~~~~ 265 (430)
T 3hyw_A 209 LFAERNIDWIANVAVKAIE--PD--------KVIYEDLNGNTHEVP-----AKFTMFMPSFQG-PEVVASAGD 265 (430)
T ss_dssp HHHHTTCEEECSCEEEEEC--SS--------EEEEECTTSCEEEEE-----CSEEEEECEEEC-CHHHHTTCT
T ss_pred HHHhCCeEEEeCceEEEEe--CC--------ceEEEeeCCCceEee-----cceEEEeccCCC-chHHHhccc
Confidence 4566899999999999983 33 355666677766774 799999999644 466777764
No 141
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.34 E-value=0.00011 Score=77.38 Aligned_cols=38 Identities=29% Similarity=0.365 Sum_probs=34.1
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPY 76 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~ 76 (570)
+.+||+||||+|++|+++|.+|++ |.+|+|+|+.+...
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~G 42 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALG 42 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSC
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcc
Confidence 346999999999999999999999 99999999986543
No 142
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.32 E-value=8.6e-05 Score=78.04 Aligned_cols=34 Identities=29% Similarity=0.560 Sum_probs=32.0
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
+.|||||||+|++|+.+|.+|++ |.+|+|+|++.
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA 37 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 46999999999999999999999 99999999984
No 143
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.32 E-value=0.00014 Score=80.38 Aligned_cols=39 Identities=31% Similarity=0.294 Sum_probs=35.1
Q ss_pred CCCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCC
Q 008331 38 LISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPY 76 (570)
Q Consensus 38 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~ 76 (570)
....+||||||+|++|+.+|..|++ |.+|+|+|+++...
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~G 427 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLG 427 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSC
T ss_pred ccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 4567899999999999999999999 99999999987544
No 144
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.32 E-value=9.7e-05 Score=77.76 Aligned_cols=35 Identities=29% Similarity=0.516 Sum_probs=32.6
Q ss_pred cccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
+|||||||+|++|+.+|.+|++ |.+|+|+|+.+..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~ 37 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGAL 37 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 5899999999999999999999 9999999998644
No 145
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.31 E-value=0.00012 Score=78.31 Aligned_cols=66 Identities=18% Similarity=0.259 Sum_probs=47.2
Q ss_pred hhhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCccccHH-HHHHhCC
Q 008331 212 LLEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIGSPQ-LLMLSGV 287 (570)
Q Consensus 212 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~tp~-LLl~SGi 287 (570)
+...+++.|++++++++|++|..++++ ++.++.+...+|+ .++ .++.||+|+|.--... +|..+|+
T Consensus 261 l~~~l~~~GV~i~~~~~V~~i~~~~~~----~v~~~~v~~~~G~-~~i-----~aD~Vv~A~G~~p~~~~~l~~~gl 327 (523)
T 1mo9_A 261 VLDRMKEQGMEIISGSNVTRIEEDANG----RVQAVVAMTPNGE-MRI-----ETDFVFLGLGEQPRSAELAKILGL 327 (523)
T ss_dssp HHHHHHHTTCEEESSCEEEEEEECTTS----BEEEEEEEETTEE-EEE-----ECSCEEECCCCEECCHHHHHHHTC
T ss_pred HHHHHHhCCcEEEECCEEEEEEEcCCC----ceEEEEEEECCCc-EEE-----EcCEEEECcCCccCCccCHHHcCC
Confidence 334556789999999999999876543 6766666555664 244 3799999999865555 6666665
No 146
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.31 E-value=8.6e-05 Score=77.72 Aligned_cols=34 Identities=29% Similarity=0.537 Sum_probs=32.0
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
+.||+||||+|++|+.+|.+|++ |.+|+|+|++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE 37 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC
Confidence 46899999999999999999999 99999999984
No 147
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.31 E-value=9.7e-05 Score=77.85 Aligned_cols=36 Identities=31% Similarity=0.357 Sum_probs=33.0
Q ss_pred cccEEEECCCCchhHHHHhhhc-c--CeEEEEccCCCCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-N--ATVLLLEKGGSPY 76 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g--~~VlvLE~G~~~~ 76 (570)
.+||||||+|.+|+++|++|++ | .+|+|||+.+...
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~G 42 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLG 42 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSB
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCC
Confidence 5799999999999999999999 9 9999999977654
No 148
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.31 E-value=8.7e-05 Score=78.43 Aligned_cols=37 Identities=24% Similarity=0.430 Sum_probs=33.2
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
+.+|||||||+|++|+++|.+|++ |.+|+|+|+.+..
T Consensus 4 ~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~ 41 (482)
T 1ojt_A 4 DAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTL 41 (482)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 346999999999999999999999 9999999996543
No 149
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.29 E-value=0.00011 Score=77.23 Aligned_cols=34 Identities=24% Similarity=0.374 Sum_probs=32.0
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
..+||||||+|++|+.+|.+|++ |.+|+|+|++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 37 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGT 37 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 46899999999999999999999 99999999984
No 150
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.28 E-value=0.00013 Score=77.40 Aligned_cols=39 Identities=28% Similarity=0.338 Sum_probs=35.1
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPYE 77 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~~ 77 (570)
...+||||||+|++|+.+|..|++ |.+|+|||+.+...+
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg 70 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGG 70 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCC
Confidence 457899999999999999999999 999999999876554
No 151
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.28 E-value=9.8e-05 Score=77.97 Aligned_cols=34 Identities=35% Similarity=0.693 Sum_probs=32.1
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.+|||||||+|++|+++|.+|++ |.+|+|+|++.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 46999999999999999999999 99999999974
No 152
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.27 E-value=0.0001 Score=72.78 Aligned_cols=31 Identities=32% Similarity=0.609 Sum_probs=29.9
Q ss_pred ccEEEECCCCchhHHHHhhhc-cC-eEEEEccC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKG 72 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G 72 (570)
|||+|||+|++|+++|..|++ |. +|+|+|+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC
Confidence 799999999999999999999 99 99999986
No 153
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.26 E-value=0.00014 Score=74.46 Aligned_cols=37 Identities=22% Similarity=0.334 Sum_probs=33.8
Q ss_pred cccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPYE 77 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~~ 77 (570)
++|++|||+|.+|+++|.+|++ |.+|+|+|+.+...+
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG 40 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGG 40 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCC
Confidence 4799999999999999999999 999999999876653
No 154
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.26 E-value=0.00011 Score=77.09 Aligned_cols=35 Identities=29% Similarity=0.465 Sum_probs=32.3
Q ss_pred cccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
+||+||||+|++|+.+|.+|++ |.+|+|+|+++..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~ 36 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKAL 36 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 4899999999999999999999 9999999998643
No 155
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.26 E-value=0.00012 Score=73.50 Aligned_cols=34 Identities=29% Similarity=0.290 Sum_probs=31.7
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
+||||||+|.+|+.+|..|++ |.+|+|+|+.+..
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~ 36 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKR 36 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTS
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCc
Confidence 699999999999999999999 9999999998743
No 156
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.25 E-value=0.00012 Score=77.73 Aligned_cols=33 Identities=42% Similarity=0.723 Sum_probs=31.5
Q ss_pred cccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
+|||||||+|++|+.+|.+|++ |.+|+|+|++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 5899999999999999999999 99999999985
No 157
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.25 E-value=0.00011 Score=74.38 Aligned_cols=33 Identities=36% Similarity=0.580 Sum_probs=31.4
Q ss_pred cccEEEECCCCchhHHHHhhhc-cC-eEEEEccCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKGG 73 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G~ 73 (570)
++||+|||+|++|+.+|.+|++ |. +|+|+|+.+
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC
Confidence 5899999999999999999999 99 999999986
No 158
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.24 E-value=0.00014 Score=76.82 Aligned_cols=39 Identities=23% Similarity=0.330 Sum_probs=34.7
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-c-CeEEEEccCCCCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-N-ATVLLLEKGGSPYE 77 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g-~~VlvLE~G~~~~~ 77 (570)
...+||+|||+|++|+++|++|++ | .+|+|+|+.+...+
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG 47 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGG 47 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSG
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCC
Confidence 346899999999999999999999 8 89999999986653
No 159
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.23 E-value=0.00011 Score=77.43 Aligned_cols=37 Identities=22% Similarity=0.256 Sum_probs=33.5
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
...||+||||+|++|+++|.+|++ |.+|+|+|+.+..
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~ 41 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETL 41 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCc
Confidence 346899999999999999999999 9999999998643
No 160
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.23 E-value=0.00012 Score=72.12 Aligned_cols=31 Identities=29% Similarity=0.461 Sum_probs=29.3
Q ss_pred cccEEEECCCCchhHHHHhhhc-cCeEEEEcc
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NATVLLLEK 71 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~ 71 (570)
+|||||||+|++|+.+|.+|++ |.+|+|+|+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~ 32 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE 32 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC
Confidence 4899999999999999999999 999999985
No 161
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.21 E-value=0.00012 Score=76.69 Aligned_cols=33 Identities=30% Similarity=0.460 Sum_probs=31.3
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCeEEEEccC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
.+||+||||+|++|+.+|.+|++ |.+|+|+|+.
T Consensus 2 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 2 IETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 35899999999999999999999 9999999997
No 162
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.21 E-value=0.00014 Score=76.85 Aligned_cols=36 Identities=31% Similarity=0.428 Sum_probs=32.7
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
.+|||||||+|++|+++|.+|++ |++|+|+|+.+..
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~ 40 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKL 40 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCc
Confidence 46899999999999999999999 9999999996543
No 163
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.20 E-value=0.00014 Score=76.25 Aligned_cols=35 Identities=26% Similarity=0.381 Sum_probs=32.0
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
...||+||||+|++|+.+|.+|++ |.+|+|+|++.
T Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 38 (458)
T 1lvl_A 3 TIQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQA 38 (458)
T ss_dssp CEECSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccCC
Confidence 346899999999999999999999 99999999943
No 164
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.18 E-value=0.00019 Score=77.48 Aligned_cols=41 Identities=27% Similarity=0.266 Sum_probs=37.6
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCCCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPYENP 79 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~~~~ 79 (570)
..+|||||||+|..|+++|..|++ |.+||+|||.+.+.++.
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~ 47 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNW 47 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCcc
Confidence 347999999999999999999999 99999999999988653
No 165
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.17 E-value=0.00013 Score=72.40 Aligned_cols=33 Identities=21% Similarity=0.321 Sum_probs=30.8
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCeEEEEccC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
..+||+|||+|++|+++|..|++ |.+|+|+|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC
Confidence 35899999999999999999999 9999999965
No 166
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.16 E-value=0.00015 Score=76.28 Aligned_cols=32 Identities=25% Similarity=0.464 Sum_probs=30.9
Q ss_pred cccEEEECCCCchhHHHHhhhc-cCeEEEEccC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
+|||||||+|++|+++|.+|++ |.+|+|+|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 5899999999999999999999 9999999998
No 167
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.15 E-value=0.00013 Score=73.01 Aligned_cols=34 Identities=24% Similarity=0.365 Sum_probs=31.5
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
...+||+|||+|++|+++|..|++ |++|+|+|+.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 46 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT 46 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Confidence 456899999999999999999999 9999999965
No 168
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.14 E-value=0.00023 Score=77.91 Aligned_cols=36 Identities=33% Similarity=0.462 Sum_probs=32.9
Q ss_pred CCcccEEEECCCCchhHHHHhhhc--cCeEEEEccCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ--NATVLLLEKGGS 74 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~--g~~VlvLE~G~~ 74 (570)
..++||||||+|++|+++|..|++ |.+|+||||.+.
T Consensus 30 ~~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~ 67 (639)
T 2dkh_A 30 PSQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEG 67 (639)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSS
T ss_pred CCCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 357999999999999999999998 899999999864
No 169
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.11 E-value=0.00022 Score=73.20 Aligned_cols=32 Identities=28% Similarity=0.428 Sum_probs=30.0
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
.|+|||+|++|+++|..|++ |.+|+|+||.+.
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~ 35 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSA 35 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 59999999999999999999 999999999754
No 170
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.10 E-value=0.00026 Score=78.75 Aligned_cols=39 Identities=26% Similarity=0.290 Sum_probs=34.7
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPYE 77 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~~ 77 (570)
...+||||||+|++|+++|..|++ |.+|+|||+++...+
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 346899999999999999999999 999999999876543
No 171
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.10 E-value=0.00015 Score=72.41 Aligned_cols=32 Identities=25% Similarity=0.283 Sum_probs=30.3
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCeEEEEcc
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEK 71 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~ 71 (570)
..+||||||+|++|+++|..|++ |.+|+|+|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEec
Confidence 35899999999999999999999 999999997
No 172
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.08 E-value=0.00022 Score=75.03 Aligned_cols=38 Identities=32% Similarity=0.330 Sum_probs=33.2
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cC-eEEEEccCCCCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKGGSPYE 77 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G~~~~~ 77 (570)
..+||+|||+|.+|+++|.+|++ |. +|+|+|+++...+
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg 42 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGG 42 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCC
Confidence 46899999999999999999999 98 8999999976554
No 173
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.07 E-value=0.0002 Score=75.22 Aligned_cols=33 Identities=36% Similarity=0.581 Sum_probs=31.7
Q ss_pred cccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
+||+||||+|++|+.+|.+|++ |.+|+|+|++.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 5899999999999999999999 99999999986
No 174
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.06 E-value=0.00034 Score=73.19 Aligned_cols=38 Identities=16% Similarity=0.121 Sum_probs=34.2
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPY 76 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~ 76 (570)
...+||+|||||++|+++|..|++ |++|+|+|+.+...
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~G 158 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMG 158 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCC
Confidence 356899999999999999999999 99999999987543
No 175
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.04 E-value=0.00032 Score=75.13 Aligned_cols=35 Identities=34% Similarity=0.536 Sum_probs=31.6
Q ss_pred CcccEEEECCCCchhHHHHhhhc----cCeEEEEccCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ----NATVLLLEKGGS 74 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~----g~~VlvLE~G~~ 74 (570)
..+||||||+|++|+++|..|++ |.+|+|||+...
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 42 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAI 42 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence 46899999999999999999997 699999999754
No 176
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.98 E-value=0.00029 Score=76.51 Aligned_cols=34 Identities=26% Similarity=0.472 Sum_probs=31.7
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
...|||||||+|+||+++|.+|++ |++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 457999999999999999999999 9999999984
No 177
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=96.96 E-value=0.00035 Score=71.24 Aligned_cols=33 Identities=24% Similarity=0.448 Sum_probs=30.3
Q ss_pred cEEEECCCCchhHHHHhhhc---cCeEEEEccCCCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ---NATVLLLEKGGSP 75 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~---g~~VlvLE~G~~~ 75 (570)
||||||+|++|+++|..|++ |.+|+|+||.+..
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 89999999999999999997 7999999998643
No 178
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.89 E-value=0.0004 Score=74.02 Aligned_cols=34 Identities=26% Similarity=0.390 Sum_probs=31.3
Q ss_pred CCCcccEEEECCCCchhHHHHhhhc-cCeEEEEcc
Q 008331 38 LISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEK 71 (570)
Q Consensus 38 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~ 71 (570)
....|||+|||+|++|+++|..|++ |.+|+|+|+
T Consensus 209 ~~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~ 243 (521)
T 1hyu_A 209 KRDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE 243 (521)
T ss_dssp TSCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred ccCcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC
Confidence 3457999999999999999999999 999999986
No 179
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.88 E-value=0.00064 Score=75.51 Aligned_cols=38 Identities=29% Similarity=0.278 Sum_probs=34.5
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPY 76 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~ 76 (570)
...+||+|||+|+||+.+|..|++ |.+|+|+|+.+...
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~G 425 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIG 425 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcC
Confidence 457899999999999999999999 99999999987654
No 180
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=96.86 E-value=0.00033 Score=74.58 Aligned_cols=34 Identities=38% Similarity=0.543 Sum_probs=29.1
Q ss_pred cccEEEECCCCchhHHHHhhhc----cCeEEEEccCCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ----NATVLLLEKGGS 74 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~----g~~VlvLE~G~~ 74 (570)
.+||||||+|++|+++|..|++ |.+|+|||+...
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~ 39 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNV 39 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC---
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCC
Confidence 4799999999999999999997 699999999764
No 181
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=96.85 E-value=0.00057 Score=73.40 Aligned_cols=35 Identities=34% Similarity=0.479 Sum_probs=31.6
Q ss_pred CcccEEEECCCCchhHHHHhhhc----cCeEEEEccCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ----NATVLLLEKGGS 74 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~----g~~VlvLE~G~~ 74 (570)
..+||||||+|++|+++|..|++ |.+|+|||+...
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 62 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDI 62 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCC
Confidence 46899999999999999999997 589999999754
No 182
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=96.84 E-value=0.00051 Score=72.67 Aligned_cols=31 Identities=19% Similarity=0.491 Sum_probs=29.4
Q ss_pred CcccEEEECCCCchhHHHHhhhc--cCeEEEEc
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ--NATVLLLE 70 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~--g~~VlvLE 70 (570)
.+||+||||+|++|+++|.+|++ |++|+|+|
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE 34 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVID 34 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEE
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 36899999999999999999998 89999999
No 183
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.84 E-value=0.00054 Score=69.98 Aligned_cols=61 Identities=11% Similarity=0.083 Sum_probs=43.2
Q ss_pred hhhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCccccHHHHHHhCC
Q 008331 212 LLEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIGSPQLLMLSGV 287 (570)
Q Consensus 212 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl~SGi 287 (570)
+....++.|++++++++|++|..+++ . ..|++ .+|+. + .++.||+|+|.--...+|..+|+
T Consensus 193 l~~~l~~~gv~i~~~~~v~~i~~~~~-----~-~~v~~--~~g~~--i-----~~d~vv~a~G~~p~~~l~~~~g~ 253 (384)
T 2v3a_A 193 VQAGLEGLGVRFHLGPVLASLKKAGE-----G-LEAHL--SDGEV--I-----PCDLVVSAVGLRPRTELAFAAGL 253 (384)
T ss_dssp HHHHHHTTTCEEEESCCEEEEEEETT-----E-EEEEE--TTSCE--E-----EESEEEECSCEEECCHHHHHTTC
T ss_pred HHHHHHHcCCEEEeCCEEEEEEecCC-----E-EEEEE--CCCCE--E-----ECCEEEECcCCCcCHHHHHHCCC
Confidence 34455678999999999999987654 2 23443 36643 3 36999999998655567777766
No 184
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.82 E-value=0.0007 Score=74.55 Aligned_cols=38 Identities=18% Similarity=0.297 Sum_probs=34.4
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPY 76 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~ 76 (570)
...+||||||+|+||+.+|..|++ |.+|+|+|+.+...
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~g 409 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIG 409 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 456899999999999999999999 99999999987654
No 185
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.78 E-value=0.00049 Score=75.53 Aligned_cols=35 Identities=37% Similarity=0.611 Sum_probs=31.8
Q ss_pred CcccEEEECCCCchhHHHHhhhc------cCeEEEEccCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ------NATVLLLEKGGS 74 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~------g~~VlvLE~G~~ 74 (570)
.++||||||+|++|+++|..|++ |.+|+||||.+.
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 36899999999999999999997 899999999753
No 186
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=96.78 E-value=0.0007 Score=74.35 Aligned_cols=40 Identities=30% Similarity=0.275 Sum_probs=35.5
Q ss_pred CCCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCCC
Q 008331 38 LISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPYE 77 (570)
Q Consensus 38 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~~ 77 (570)
....+||+|||+|++|+++|..|++ |.+|+|+|+.+...+
T Consensus 104 ~~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg 144 (662)
T 2z3y_A 104 TKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 144 (662)
T ss_dssp SSCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBT
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 3456899999999999999999999 999999999876554
No 187
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.77 E-value=0.00062 Score=69.09 Aligned_cols=34 Identities=38% Similarity=0.526 Sum_probs=30.9
Q ss_pred cccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
.-|+||||+|+||+.+|.+|++ | +|+|+|+++..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCC
Confidence 3599999999999999999999 9 99999998754
No 188
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=96.77 E-value=0.00053 Score=72.60 Aligned_cols=33 Identities=15% Similarity=0.386 Sum_probs=30.3
Q ss_pred CCcccEEEECCCCchhHHHHhhhc--cCeEEEEcc
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ--NATVLLLEK 71 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~--g~~VlvLE~ 71 (570)
...||+||||+|++|+++|.+|++ |++|+|+|+
T Consensus 5 ~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 5 SKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 346999999999999999999998 899999993
No 189
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=96.75 E-value=0.00057 Score=72.27 Aligned_cols=35 Identities=11% Similarity=0.277 Sum_probs=32.4
Q ss_pred cccEEEECCCCchhHHHHhhhc-c---CeEEEEccCCCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-N---ATVLLLEKGGSP 75 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g---~~VlvLE~G~~~ 75 (570)
++||||||+|++|+.+|.+|++ | .+|+|+|+.+..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~ 73 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNI 73 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCC
Confidence 5899999999999999999999 8 999999998743
No 190
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=96.73 E-value=0.00056 Score=72.53 Aligned_cols=33 Identities=24% Similarity=0.464 Sum_probs=30.5
Q ss_pred cccEEEECCCCchhHHHHhhhc----cCeEEEEccCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ----NATVLLLEKGG 73 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~----g~~VlvLE~G~ 73 (570)
.|||||||+|++|+++|.+|++ |.+|+|+|++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 4899999999999999999987 67999999986
No 191
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.65 E-value=0.0007 Score=77.56 Aligned_cols=63 Identities=16% Similarity=0.173 Sum_probs=45.4
Q ss_pred hcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEe--c---CCceEEEEecCCCCceEEEcCCccccHHHHHHhC
Q 008331 215 YADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYD--H---VGARHRACLNNGGKNEIILSAGAIGSPQLLMLSG 286 (570)
Q Consensus 215 ~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~--~---~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl~SG 286 (570)
.+++.|++|++++.|++|..++++ ++.+|++.+ . +|+..++ .++.||+|+|-.-+..++...|
T Consensus 325 ~l~~~GV~v~~~~~v~~i~~~~~~----~v~~v~~~~~~~~~~~G~~~~i-----~~D~Vv~a~G~~P~~~l~~~~~ 392 (965)
T 2gag_A 325 QAVADGVQVISGSVVVDTEADENG----ELSAIVVAELDEARELGGTQRF-----EADVLAVAGGFNPVVHLHSQRQ 392 (965)
T ss_dssp HHHHTTCCEEETEEEEEEEECTTS----CEEEEEEEEECTTCCEEEEEEE-----ECSEEEEECCEEECCHHHHHTT
T ss_pred HHHhCCeEEEeCCEeEEEeccCCC----CEEEEEEEeccccCCCCceEEE-----EcCEEEECCCcCcChHHHHhCC
Confidence 345679999999999999875222 788898875 2 2544455 3799999999766666766554
No 192
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.64 E-value=0.00084 Score=70.17 Aligned_cols=34 Identities=21% Similarity=0.178 Sum_probs=31.2
Q ss_pred ccEEEECCCCchhHHHHhhhc---cCeEEEEccCCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ---NATVLLLEKGGSP 75 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~---g~~VlvLE~G~~~ 75 (570)
+|+||||+|++|+.+|.+|++ |.+|+|+|+.+..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNI 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 589999999999999999997 7999999998753
No 193
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=96.63 E-value=0.001 Score=68.48 Aligned_cols=36 Identities=14% Similarity=0.243 Sum_probs=32.3
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cC--eEEEEccCCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NA--TVLLLEKGGSP 75 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~--~VlvLE~G~~~ 75 (570)
..+|+||||+|++|+.+|.+|++ |. +|+|+|+.+..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~ 44 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAER 44 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCC
Confidence 46899999999999999999999 86 59999998754
No 194
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.63 E-value=0.0012 Score=73.98 Aligned_cols=39 Identities=31% Similarity=0.293 Sum_probs=35.1
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPYE 77 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~~ 77 (570)
...+||+|||+|++|+++|+.|++ |++|+|+|+.+...+
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG 315 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 315 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCC
Confidence 456899999999999999999999 999999999876654
No 195
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=96.60 E-value=0.001 Score=69.47 Aligned_cols=35 Identities=20% Similarity=0.329 Sum_probs=31.9
Q ss_pred ccEEEECCCCchhHHHHhhhc---cCeEEEEccCCCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ---NATVLLLEKGGSPY 76 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~---g~~VlvLE~G~~~~ 76 (570)
.||||||+|++|+++|.+|++ |.+|+|+|+++...
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g 40 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVG 40 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCc
Confidence 589999999999999999998 68999999998654
No 196
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.59 E-value=0.0012 Score=69.03 Aligned_cols=36 Identities=22% Similarity=0.347 Sum_probs=32.2
Q ss_pred cccEEEECCCCchhHHHHhhhc---cCeEEEEccCCCCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ---NATVLLLEKGGSPY 76 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~---g~~VlvLE~G~~~~ 76 (570)
.+||||||+|++|+.+|.+|++ +.+|+|+|+.+...
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~ 41 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVS 41 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccc
Confidence 4799999999999999999998 57999999998643
No 197
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.58 E-value=0.0011 Score=70.10 Aligned_cols=60 Identities=18% Similarity=0.289 Sum_probs=43.8
Q ss_pred hhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCccccHHHHHHhCC
Q 008331 213 LEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIGSPQLLMLSGV 287 (570)
Q Consensus 213 l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl~SGi 287 (570)
....++.|+++++++.|++|..+++ ++ .|+. .+|+. + .++.||+|+|..-++.++..+|+
T Consensus 233 ~~~l~~~GV~v~~~~~V~~i~~~~~-----~~-~v~l--~dG~~--i-----~aD~Vv~a~G~~pn~~l~~~~gl 292 (493)
T 1m6i_A 233 MEKVRREGVKVMPNAIVQSVGVSSG-----KL-LIKL--KDGRK--V-----ETDHIVAAVGLEPNVELAKTGGL 292 (493)
T ss_dssp HHHHHTTTCEEECSCCEEEEEEETT-----EE-EEEE--TTSCE--E-----EESEEEECCCEEECCTTHHHHTC
T ss_pred HHHHHhcCCEEEeCCEEEEEEecCC-----eE-EEEE--CCCCE--E-----ECCEEEECCCCCccHHHHHHcCC
Confidence 3455678999999999999986544 43 4554 36753 4 36999999998766667777776
No 198
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=96.49 E-value=0.01 Score=63.16 Aligned_cols=33 Identities=12% Similarity=0.313 Sum_probs=30.1
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~ 248 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEP 248 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCc
Confidence 469999999999999999999 999999998853
No 199
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.44 E-value=0.0016 Score=68.12 Aligned_cols=37 Identities=30% Similarity=0.370 Sum_probs=32.9
Q ss_pred CcccEEEECCCCchhHHHHhhhc-c--CeEEEEccCCCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-N--ATVLLLEKGGSPY 76 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g--~~VlvLE~G~~~~ 76 (570)
..+|+||||+|++|+.+|..|++ | .+|+|+|+.+...
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~g 44 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPF 44 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSC
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCC
Confidence 45799999999999999999999 8 9999999987643
No 200
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=96.43 E-value=0.0015 Score=68.83 Aligned_cols=35 Identities=37% Similarity=0.622 Sum_probs=31.4
Q ss_pred cccEEEECCCCchhHHHHhhhc---cCeEEEEccCCCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ---NATVLLLEKGGSP 75 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~---g~~VlvLE~G~~~ 75 (570)
.+||||||+|++|+.+|.+|++ |.+|+|+|+.+..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 73 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIY 73 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCC
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 4699999999999999999998 7899999998754
No 201
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.40 E-value=0.014 Score=59.40 Aligned_cols=33 Identities=21% Similarity=0.398 Sum_probs=30.3
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
-+++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 179 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQ 179 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcc
Confidence 479999999999999999999 999999998753
No 202
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=96.38 E-value=0.0018 Score=70.07 Aligned_cols=37 Identities=24% Similarity=0.478 Sum_probs=33.0
Q ss_pred CCcccEEEECCCCchhHHHHhhhc---cCeEEEEccCCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ---NATVLLLEKGGSP 75 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~---g~~VlvLE~G~~~ 75 (570)
....||||||+|++|+++|.+|++ |.+|+|+|+.+..
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~ 73 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYI 73 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 345799999999999999999998 6899999999864
No 203
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.37 E-value=0.0017 Score=74.91 Aligned_cols=37 Identities=16% Similarity=0.188 Sum_probs=33.2
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cC-eEEEEccCCCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKGGSPY 76 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G~~~~ 76 (570)
..+||+|||||+||+++|..|++ |+ +|+|+|+.+...
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~G 224 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVG 224 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCC
Confidence 46899999999999999999999 98 799999986543
No 204
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=96.36 E-value=0.0015 Score=68.05 Aligned_cols=34 Identities=24% Similarity=0.354 Sum_probs=30.9
Q ss_pred ccEEEECCCCchhHHHHhhhc---cCeEEEEccCCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ---NATVLLLEKGGSP 75 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~---g~~VlvLE~G~~~ 75 (570)
.|+||||+|++|+.+|.+|++ |.+|+|+|+.+..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFI 37 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCcc
Confidence 389999999999999999998 7899999998754
No 205
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.30 E-value=0.0014 Score=69.24 Aligned_cols=36 Identities=39% Similarity=0.456 Sum_probs=32.4
Q ss_pred cccEEEECCCCchhHHHHhhhccCeEEEEccCCCCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQNATVLLLEKGGSPY 76 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~g~~VlvLE~G~~~~ 76 (570)
.+||||||+|++|+.+|.+|++..+|+|+|+++...
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~~~V~vie~~~~~G 143 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQYLTVALIEERGWLG 143 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTTCCEEEECTTSSSS
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCEEEEeCCCCCC
Confidence 579999999999999999998768999999998654
No 206
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.30 E-value=0.019 Score=57.59 Aligned_cols=59 Identities=15% Similarity=0.161 Sum_probs=43.1
Q ss_pred CCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCccccHHHHHHhC
Q 008331 218 PEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIGSPQLLMLSG 286 (570)
Q Consensus 218 ~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl~SG 286 (570)
+.|++++++++|++|..+++ ++.+|.+...+|+...+. ++.||+|+|.--.+.+|..+|
T Consensus 214 ~~gv~i~~~~~v~~i~~~~~-----~v~~v~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~l~~~~ 272 (360)
T 3ab1_A 214 NGTIDVYLETEVASIEESNG-----VLTRVHLRSSDGSKWTVE-----ADRLLILIGFKSNLGPLARWD 272 (360)
T ss_dssp HTSEEEESSEEEEEEEEETT-----EEEEEEEEETTCCEEEEE-----CSEEEECCCBCCSCGGGGGSS
T ss_pred cCceEEEcCcCHHHhccCCC-----ceEEEEEEecCCCeEEEe-----CCEEEECCCCCCCHHHHHhhc
Confidence 35899999999999988765 788888874567655553 799999999644434544433
No 207
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=96.25 E-value=0.002 Score=66.73 Aligned_cols=34 Identities=21% Similarity=0.379 Sum_probs=31.1
Q ss_pred ccEEEECCCCchhHHHHhhhc---cCeEEEEccCCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ---NATVLLLEKGGSP 75 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~---g~~VlvLE~G~~~ 75 (570)
.||||||+|++|+.+|.+|++ |.+|+|+|+.+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~ 39 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF 39 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCC
Confidence 589999999999999999998 5899999998754
No 208
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.22 E-value=0.019 Score=56.15 Aligned_cols=54 Identities=17% Similarity=0.233 Sum_probs=41.0
Q ss_pred CCeEEEecceEEEEEecCCCCCCCeEEEEEEEe-cCCceEEEEecCCCCceEEEcCCccccHHHH
Q 008331 219 EKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYD-HVGARHRACLNNGGKNEIILSAGAIGSPQLL 282 (570)
Q Consensus 219 ~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~-~~G~~~~v~~~~~aa~~VVLaaGa~~tp~LL 282 (570)
.|++++++++|++|..+++ ++.+|++.+ .+|+..++. ++.||+|+|..-.+.+|
T Consensus 193 ~gv~v~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~l 247 (310)
T 1fl2_A 193 KNVDIILNAQTTEVKGDGS-----KVVGLEYRDRVSGDIHNIE-----LAGIFVQIGLLPNTNWL 247 (310)
T ss_dssp TTEEEESSEEEEEEEESSS-----SEEEEEEEETTTCCEEEEE-----CSEEEECSCEEESCGGG
T ss_pred CCeEEecCCceEEEEcCCC-----cEEEEEEEECCCCcEEEEE-----cCEEEEeeCCccCchHH
Confidence 5899999999999987654 788999986 346655663 79999999965444444
No 209
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.20 E-value=0.0023 Score=66.92 Aligned_cols=35 Identities=37% Similarity=0.398 Sum_probs=31.8
Q ss_pred cccEEEECCCCchhHHHHhhhc--------cCeEEEEccCCCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ--------NATVLLLEKGGSP 75 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~--------g~~VlvLE~G~~~ 75 (570)
.+||+|||+|++|+.+|..|++ |.+|+|+|+.+..
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC
Confidence 5799999999999999999987 7999999998754
No 210
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=96.15 E-value=0.017 Score=56.83 Aligned_cols=56 Identities=5% Similarity=0.071 Sum_probs=41.2
Q ss_pred CCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEec-C-CceEEEEecCCCCceEEEcCCccccHHHH
Q 008331 217 DPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDH-V-GARHRACLNNGGKNEIILSAGAIGSPQLL 282 (570)
Q Consensus 217 ~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~-~-G~~~~v~~~~~aa~~VVLaaGa~~tp~LL 282 (570)
++.|++++++++|++|..+++ ++.+|.+.+. + |+..++. ++.||+|+|.--.+.+|
T Consensus 195 ~~~gv~i~~~~~v~~i~~~~~-----~v~~v~~~~~~~~g~~~~i~-----~D~vv~a~G~~p~~~~~ 252 (320)
T 1trb_A 195 ENGNIILHTNRTLEEVTGDQM-----GVTGVRLRDTQNSDNIESLD-----VAGLFVAIGHSPNTAIF 252 (320)
T ss_dssp HTSSEEEECSCEEEEEEECSS-----SEEEEEEECCTTCCCCEEEE-----CSEEEECSCEEESCGGG
T ss_pred ccCCeEEEcCceeEEEEcCCC-----ceEEEEEEeccCCCceEEEE-----cCEEEEEeCCCCChHHh
Confidence 346899999999999987665 7888998752 2 5445553 79999999975444443
No 211
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=96.05 E-value=0.0027 Score=65.27 Aligned_cols=33 Identities=24% Similarity=0.344 Sum_probs=30.2
Q ss_pred cEEEECCCCchhHHHHhhhc----cCeEEEEccCCCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ----NATVLLLEKGGSP 75 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~----g~~VlvLE~G~~~ 75 (570)
||||||+|++|+.+|.+|++ |.+|+|+|+.+..
T Consensus 3 ~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~ 39 (409)
T 3h8l_A 3 KVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFS 39 (409)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEE
T ss_pred eEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCc
Confidence 79999999999999999987 6999999999743
No 212
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.05 E-value=0.0043 Score=64.44 Aligned_cols=34 Identities=26% Similarity=0.417 Sum_probs=30.9
Q ss_pred ccEEEECCCCchhHHHHhhhc----cCeEEEEccCCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ----NATVLLLEKGGSP 75 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~----g~~VlvLE~G~~~ 75 (570)
.||||||+|++|+.+|..|++ |.+|+|+|+.+..
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~ 42 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYF 42 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCC
Confidence 589999999999999999987 6899999999753
No 213
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=95.88 E-value=0.0039 Score=67.02 Aligned_cols=35 Identities=26% Similarity=0.472 Sum_probs=31.3
Q ss_pred ccEEEECCCCchhHHHHhhhc---cCeEEEEccCCCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ---NATVLLLEKGGSPY 76 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~---g~~VlvLE~G~~~~ 76 (570)
.||+|||+|++|+.+|.+|++ +.+|+|+|+.+...
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~ 39 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS 39 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 379999999999999999998 58999999998643
No 214
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=95.87 E-value=0.0052 Score=63.76 Aligned_cols=33 Identities=18% Similarity=0.461 Sum_probs=29.4
Q ss_pred cEEEECCCCchhHHHHhhhc-c--CeEEEEccCCCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-N--ATVLLLEKGGSP 75 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g--~~VlvLE~G~~~ 75 (570)
-|||||+|+||+.+|.+|++ | .+|+|+|+++..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~ 37 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDM 37 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 38999999999999999998 7 579999998754
No 215
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=95.87 E-value=0.0029 Score=69.11 Aligned_cols=35 Identities=31% Similarity=0.415 Sum_probs=32.4
Q ss_pred cccEEEECCCCchhHHHHhhhc-c--------CeEEEEccCC-CC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-N--------ATVLLLEKGG-SP 75 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g--------~~VlvLE~G~-~~ 75 (570)
..+|+|||+|++|+++|++|++ | .+|+|+|+.+ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 5799999999999999999999 8 9999999987 55
No 216
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=95.84 E-value=0.017 Score=60.41 Aligned_cols=32 Identities=28% Similarity=0.461 Sum_probs=29.7
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 202 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMP 202 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCC
Confidence 469999999999999999999 99999999885
No 217
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.81 E-value=0.015 Score=60.71 Aligned_cols=32 Identities=34% Similarity=0.508 Sum_probs=29.6
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-.++|||+|.+|+-+|..|++ |.+|.|+|+++
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~ 200 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMD 200 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCC
Confidence 369999999999999999999 99999999875
No 218
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=95.73 E-value=0.016 Score=60.87 Aligned_cols=33 Identities=24% Similarity=0.399 Sum_probs=29.9
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 217 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQ 217 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 469999999999999999999 999999998863
No 219
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=95.68 E-value=0.018 Score=60.01 Aligned_cols=31 Identities=26% Similarity=0.348 Sum_probs=28.6
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 169 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 200 (450)
T 1ges_A 169 RVAVVGAGYIGVELGGVINGLGAKTHLFEMFD 200 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 69999999999999999999 99999999875
No 220
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=95.65 E-value=0.012 Score=61.80 Aligned_cols=31 Identities=26% Similarity=0.461 Sum_probs=27.0
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 218 (479)
T 2hqm_A 187 KVVVVGAGYIGIELAGVFHGLGSETHLVIRGE 218 (479)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHHcCCceEEEEeCC
Confidence 58899999999999998888 89999998775
No 221
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.63 E-value=0.007 Score=61.65 Aligned_cols=38 Identities=13% Similarity=0.158 Sum_probs=32.7
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSPY 76 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~~ 76 (570)
.+..-|||||+|+||+.+|.+|+. +.+|+|+|+.+...
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~ 45 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLP 45 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCC
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCC
Confidence 345679999999999999999977 89999999997643
No 222
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=95.61 E-value=0.041 Score=54.34 Aligned_cols=59 Identities=14% Similarity=0.157 Sum_probs=41.4
Q ss_pred CCCeEEEecceEEEEEecCCCCCCCeEEEEEEEec-CCceEEEEecCCCCceEEEcCCccccHHHHHHhCC
Q 008331 218 PEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDH-VGARHRACLNNGGKNEIILSAGAIGSPQLLMLSGV 287 (570)
Q Consensus 218 ~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~-~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl~SGi 287 (570)
+.|+++++++.|++|..+ + ++.+|.+.+. +|+..++ .++.||+|+|.--...+|..+|+
T Consensus 203 ~~gv~v~~~~~v~~i~~~-~-----~~~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~l~~~~~ 262 (335)
T 2zbw_A 203 EGRLEVLTPYELRRVEGD-E-----RVRWAVVFHNQTQEELAL-----EVDAVLILAGYITKLGPLANWGL 262 (335)
T ss_dssp TTSSEEETTEEEEEEEES-S-----SEEEEEEEETTTCCEEEE-----ECSEEEECCCEEEECGGGGGSCC
T ss_pred cCCeEEecCCcceeEccC-C-----CeeEEEEEECCCCceEEE-----ecCEEEEeecCCCCchHhhhcce
Confidence 358899999999999873 3 6778888743 5654555 37999999997544445544443
No 223
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=95.60 E-value=0.0059 Score=62.49 Aligned_cols=58 Identities=9% Similarity=-0.022 Sum_probs=41.1
Q ss_pred hcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCccccHHHHHHhCCC
Q 008331 215 YADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIGSPQLLMLSGVG 288 (570)
Q Consensus 215 ~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl~SGiG 288 (570)
..++.|++++++++|..+..+... . .|+ ..+|+. + .++.||++.|- ..+.++..||+-
T Consensus 211 ~l~~~gi~v~~~~~v~~v~~~~~~----~--~v~--~~~g~~--i-----~~D~vi~~~g~-~~~~~~~~~gl~ 268 (401)
T 3vrd_B 211 GTENALIEWHPGPDAAVVKTDTEA----M--TVE--TSFGET--F-----KAAVINLIPPQ-RAGKIAQSASLT 268 (401)
T ss_dssp TSTTCSEEEECTTTTCEEEEETTT----T--EEE--ETTSCE--E-----ECSEEEECCCE-EECHHHHHTTCC
T ss_pred HHHhcCcEEEeCceEEEEEecccc----e--EEE--cCCCcE--E-----EeeEEEEecCc-CCchhHhhcccc
Confidence 456789999999999999877652 1 233 346764 3 36899999885 344678888773
No 224
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=95.56 E-value=0.043 Score=53.54 Aligned_cols=55 Identities=13% Similarity=0.137 Sum_probs=40.8
Q ss_pred CCeEEEecceEEEEEecCCCCCCCeEEEEEEEe-cCCceEEEEecCCCCceEEEcCCccccHHHHH
Q 008331 219 EKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYD-HVGARHRACLNNGGKNEIILSAGAIGSPQLLM 283 (570)
Q Consensus 219 ~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~-~~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl 283 (570)
.|+++++++.|++|..+++ ++.+|.+.+ .+|+..++. ++.||+|+|..-...+|.
T Consensus 192 ~gv~v~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~l~ 247 (311)
T 2q0l_A 192 DKIEFLTPYVVEEIKGDAS-----GVSSLSIKNTATNEKRELV-----VPGFFIFVGYDVNNAVLK 247 (311)
T ss_dssp TTEEEETTEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----CSEEEECSCEEECCGGGB
T ss_pred CCeEEEeCCEEEEEECCCC-----cEeEEEEEecCCCceEEEe-----cCEEEEEecCccChhhhh
Confidence 5899999999999987654 777888874 256655564 799999999754444443
No 225
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=95.52 E-value=0.048 Score=58.13 Aligned_cols=34 Identities=9% Similarity=0.242 Sum_probs=31.2
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
-.|+|||+|+.|+-+|..|++ +.+|.|+++.+.+
T Consensus 186 krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNW 220 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCC
T ss_pred CeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCc
Confidence 369999999999999999999 9999999999853
No 226
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=95.51 E-value=0.073 Score=55.54 Aligned_cols=32 Identities=25% Similarity=0.467 Sum_probs=28.8
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 207 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAP 207 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCC
Confidence 368999999999999999999 99999999875
No 227
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=95.41 E-value=0.0089 Score=63.18 Aligned_cols=36 Identities=11% Similarity=0.187 Sum_probs=32.1
Q ss_pred CCcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
.++..|||||+|.||+.+|.+|++ +.+|+|||+.++
T Consensus 40 ~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 40 SDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp CSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 345679999999999999999999 999999999864
No 228
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.35 E-value=0.041 Score=57.43 Aligned_cols=31 Identities=26% Similarity=0.365 Sum_probs=28.4
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 168 ~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~ 199 (463)
T 2r9z_A 168 RVAIIGAGYIGIELAGLLRSFGSEVTVVALED 199 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 68999999999999999999 99999999875
No 229
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=95.31 E-value=0.073 Score=56.40 Aligned_cols=54 Identities=17% Similarity=0.276 Sum_probs=41.4
Q ss_pred CCeEEEecceEEEEEecCCCCCCCeEEEEEEEec-CCceEEEEecCCCCceEEEcCCccccHHHH
Q 008331 219 EKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDH-VGARHRACLNNGGKNEIILSAGAIGSPQLL 282 (570)
Q Consensus 219 ~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~-~G~~~~v~~~~~aa~~VVLaaGa~~tp~LL 282 (570)
.|+++++++.|++|..+++ ++++|.+.+. +|+...+. ++.||+|+|..-++.+|
T Consensus 404 ~gV~v~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~pn~~~l 458 (521)
T 1hyu_A 404 KNVDIILNAQTTEVKGDGS-----KVVGLEYRDRVSGDIHSVA-----LAGIFVQIGLLPNTHWL 458 (521)
T ss_dssp TTEEEECSEEEEEEEECSS-----SEEEEEEEETTTCCEEEEE-----CSEEEECCCEEESCGGG
T ss_pred CCcEEEeCCEEEEEEcCCC-----cEEEEEEEeCCCCceEEEE-----cCEEEECcCCCCCchHH
Confidence 5899999999999987655 7889999863 47656664 78999999965444443
No 230
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=95.26 E-value=0.043 Score=57.72 Aligned_cols=33 Identities=27% Similarity=0.433 Sum_probs=29.2
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 208 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGS 208 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCc
Confidence 369999999999999999999 999999998853
No 231
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=95.24 E-value=0.11 Score=54.65 Aligned_cols=31 Identities=32% Similarity=0.490 Sum_probs=28.3
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 200 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 231 (491)
T 3urh_A 200 SMIVVGGGVIGLELGSVWARLGAKVTVVEFLD 231 (491)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHHcCCEEEEEeccc
Confidence 58999999999999999999 99999999875
No 232
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=95.01 E-value=0.078 Score=55.12 Aligned_cols=51 Identities=16% Similarity=0.120 Sum_probs=37.9
Q ss_pred CCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEec-CCceEEEEecCCCCceEEEcCCcccc
Q 008331 217 DPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDH-VGARHRACLNNGGKNEIILSAGAIGS 278 (570)
Q Consensus 217 ~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~-~G~~~~v~~~~~aa~~VVLaaGa~~t 278 (570)
...|++|+++++|+++..+++ . ..|.+.+. +|+..++. ++.||+|+|.--.
T Consensus 327 ~~~~v~i~~~~~v~~v~~~~~-----~-~~v~~~~~~~g~~~~~~-----~D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 327 GIPRHAFRCMTTVERATATAQ-----G-IELALRDAGSGELSVET-----YDAVILATGYERQ 378 (463)
T ss_dssp CCCCSEEETTEEEEEEEEETT-----E-EEEEEEETTTCCEEEEE-----ESEEEECCCEECC
T ss_pred CCCCeEEEeCCEEEEEEecCC-----E-EEEEEEEcCCCCeEEEE-----CCEEEEeeCCCCC
Confidence 457999999999999987654 3 34666644 57665664 7999999997544
No 233
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=94.75 E-value=0.12 Score=55.35 Aligned_cols=31 Identities=29% Similarity=0.448 Sum_probs=29.4
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 184 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHLGIKTTLLELAD 184 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCcEEEEEcCC
Confidence 69999999999999999999 99999999875
No 234
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=94.72 E-value=0.16 Score=52.91 Aligned_cols=32 Identities=25% Similarity=0.413 Sum_probs=29.1
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 211 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLG 211 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccC
Confidence 369999999999999999999 99999999875
No 235
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=94.43 E-value=0.073 Score=55.84 Aligned_cols=32 Identities=31% Similarity=0.540 Sum_probs=28.7
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~ 224 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGD 224 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCeEEEEECCC
Confidence 368999999999999999999 99999999875
No 236
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=94.37 E-value=0.28 Score=51.16 Aligned_cols=32 Identities=25% Similarity=0.341 Sum_probs=28.8
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 213 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMD 213 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Confidence 368999999999999999999 99999999875
No 237
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=94.35 E-value=0.08 Score=51.98 Aligned_cols=58 Identities=12% Similarity=0.099 Sum_probs=40.4
Q ss_pred CCeEEEecceEEEEEecCCCCCCCeEEEEEEEe-cCCceEEEEecCCCCceEEEcCCccccHHHHHHhCC
Q 008331 219 EKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYD-HVGARHRACLNNGGKNEIILSAGAIGSPQLLMLSGV 287 (570)
Q Consensus 219 ~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~-~~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl~SGi 287 (570)
.|++++++++|++|..++ .+.+|.+.+ .+|+..++. ++.||+|+|..-.+.+|..+|+
T Consensus 202 ~gv~~~~~~~v~~i~~~~------~~~~v~~~~~~~g~~~~~~-----~D~vv~a~G~~p~~~~~~~~~~ 260 (332)
T 3lzw_A 202 SKVNVLTPFVPAELIGED------KIEQLVLEEVKGDRKEILE-----IDDLIVNYGFVSSLGPIKNWGL 260 (332)
T ss_dssp SSCEEETTEEEEEEECSS------SCCEEEEEETTSCCEEEEE-----CSEEEECCCEECCCGGGGGSSC
T ss_pred CCeEEEeCceeeEEecCC------ceEEEEEEecCCCceEEEE-----CCEEEEeeccCCCchHHhhcCc
Confidence 578899999999987653 345677776 345555553 7999999997655555554443
No 238
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=94.07 E-value=0.11 Score=56.07 Aligned_cols=31 Identities=26% Similarity=0.486 Sum_probs=29.2
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 189 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 220 (588)
T 3ics_A 189 HATVIGGGFIGVEMVENLRERGIEVTLVEMAN 220 (588)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 69999999999999999999 99999999875
No 239
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=93.98 E-value=0.13 Score=54.05 Aligned_cols=31 Identities=19% Similarity=0.471 Sum_probs=25.9
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 184 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 215 (499)
T 1xdi_A 184 HLIVVGSGVTGAEFVDAYTELGVPVTVVASQD 215 (499)
T ss_dssp SEEEESCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC
Confidence 58888888888888888888 88888888775
No 240
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=93.91 E-value=0.23 Score=51.90 Aligned_cols=55 Identities=13% Similarity=0.210 Sum_probs=37.6
Q ss_pred CCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecC-CceEEEEecCCCCceEEEcCCccccHHHH
Q 008331 218 PEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHV-GARHRACLNNGGKNEIILSAGAIGSPQLL 282 (570)
Q Consensus 218 ~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~-G~~~~v~~~~~aa~~VVLaaGa~~tp~LL 282 (570)
+.|++|++++.|++|..++++ + ..|++.+.+ |+..++. ++.||+|+|---...+|
T Consensus 239 ~~Gv~i~~~~~v~~i~~~~~~----~-~~v~~~~~~~~~~~~~~-----~D~vi~a~G~~p~~~~l 294 (483)
T 3dgh_A 239 ERGIPFLRKTVPLSVEKQDDG----K-LLVKYKNVETGEESEDV-----YDTVLWAIGRKGLVDDL 294 (483)
T ss_dssp HTTCCEEETEEEEEEEECTTS----C-EEEEEEETTTCCEEEEE-----ESEEEECSCEEECCGGG
T ss_pred hCCCEEEeCCEEEEEEEcCCC----c-EEEEEecCCCCceeEEE-----cCEEEECcccccCcCcC
Confidence 358889999999999876552 3 347776533 4444553 79999999975444443
No 241
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=93.89 E-value=0.25 Score=51.69 Aligned_cols=54 Identities=19% Similarity=0.222 Sum_probs=36.7
Q ss_pred CCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecC-CceEEEEecCCCCceEEEcCCccccHHH
Q 008331 218 PEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHV-GARHRACLNNGGKNEIILSAGAIGSPQL 281 (570)
Q Consensus 218 ~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~-G~~~~v~~~~~aa~~VVLaaGa~~tp~L 281 (570)
+.|+++++++.|++|...+++ . ..|.+.+.+ |+..++. ++.||+|+|-.-...+
T Consensus 237 ~~gv~~~~~~~v~~i~~~~~~----~-~~v~~~~~~~g~~~~~~-----~D~vi~a~G~~p~~~~ 291 (488)
T 3dgz_A 237 SHGTQFLKGCVPSHIKKLPTN----Q-LQVTWEDHASGKEDTGT-----FDTVLWAIGRVPETRT 291 (488)
T ss_dssp HTTCEEEETEEEEEEEECTTS----C-EEEEEEETTTTEEEEEE-----ESEEEECSCEEESCGG
T ss_pred HCCCEEEeCCEEEEEEEcCCC----c-EEEEEEeCCCCeeEEEE-----CCEEEEcccCCcccCc
Confidence 358899999999999875442 2 346666533 5544453 6999999997544444
No 242
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=93.73 E-value=0.34 Score=50.14 Aligned_cols=33 Identities=21% Similarity=0.278 Sum_probs=30.0
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 181 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLEN 181 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCc
Confidence 369999999999999999999 999999998853
No 243
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=93.50 E-value=0.071 Score=55.57 Aligned_cols=32 Identities=22% Similarity=0.376 Sum_probs=27.7
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 171 ~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~ 203 (463)
T 4dna_A 171 ESILIAGGGYIAVEFANIFHGLGVKTTLIYRGK 203 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC
Confidence 368999999999999999988 99999998775
No 244
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=91.96 E-value=0.5 Score=49.46 Aligned_cols=48 Identities=17% Similarity=0.271 Sum_probs=33.9
Q ss_pred CCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCcccc
Q 008331 217 DPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIGS 278 (570)
Q Consensus 217 ~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~t 278 (570)
++.|++++++++|++|..+++ ....|++ .+|+ ++ .++.||+|+|.--.
T Consensus 242 ~~~GV~i~~~~~v~~i~~~~~-----~~~~v~~--~~G~--~i-----~~D~vv~a~G~~p~ 289 (490)
T 1fec_A 242 RANGINVRTHENPAKVTKNAD-----GTRHVVF--ESGA--EA-----DYDVVMLAIGRVPR 289 (490)
T ss_dssp HHTTEEEEETCCEEEEEECTT-----SCEEEEE--TTSC--EE-----EESEEEECSCEEES
T ss_pred HhCCCEEEeCCEEEEEEEcCC-----CEEEEEE--CCCc--EE-----EcCEEEEccCCCcC
Confidence 346899999999999987654 2234554 3665 34 36999999996533
No 245
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=91.84 E-value=0.57 Score=49.09 Aligned_cols=50 Identities=12% Similarity=0.279 Sum_probs=34.9
Q ss_pred CCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCccccHH
Q 008331 217 DPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIGSPQ 280 (570)
Q Consensus 217 ~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~tp~ 280 (570)
++.|++++++++|++|..+++ ....|++ .+|+ ++ .++.||+|+|..-...
T Consensus 246 ~~~GV~i~~~~~v~~i~~~~~-----~~~~v~~--~~G~--~i-----~~D~vv~a~G~~p~~~ 295 (495)
T 2wpf_A 246 TANGIEIMTNENPAKVSLNTD-----GSKHVTF--ESGK--TL-----DVDVVMMAIGRIPRTN 295 (495)
T ss_dssp HHTTCEEEESCCEEEEEECTT-----SCEEEEE--TTSC--EE-----EESEEEECSCEEECCG
T ss_pred HhCCCEEEeCCEEEEEEEcCC-----ceEEEEE--CCCc--EE-----EcCEEEECCCCccccc
Confidence 346899999999999987654 2344554 3665 34 3699999999754433
No 246
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=91.79 E-value=0.58 Score=53.83 Aligned_cols=31 Identities=26% Similarity=0.442 Sum_probs=28.4
Q ss_pred cEEEECCCCchhHHHHhhhc-cC-eEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G~ 73 (570)
.|+|||+|..|+-+|..|++ |. +|.|+|+.+
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 79999999999999999999 86 899999874
No 247
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=91.73 E-value=0.1 Score=54.06 Aligned_cols=35 Identities=14% Similarity=0.309 Sum_probs=32.0
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
...+++|||+|.+|+-+|..|++ |.+|.|+|+++.
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 183 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDR 183 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcc
Confidence 35689999999999999999999 999999999864
No 248
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=91.20 E-value=0.16 Score=43.14 Aligned_cols=31 Identities=23% Similarity=0.417 Sum_probs=29.1
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.++|||.|..|..+|..|.+ |.+|+++|+.+
T Consensus 9 ~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 9 HALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 59999999999999999999 99999999864
No 249
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=90.90 E-value=0.14 Score=49.88 Aligned_cols=33 Identities=18% Similarity=0.388 Sum_probs=30.4
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 147 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 59999999999999999999 9999999998643
No 250
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=90.62 E-value=0.14 Score=51.87 Aligned_cols=33 Identities=24% Similarity=0.309 Sum_probs=30.7
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
.++|||+|..|+-+|..|++ |.+|.|+|+.+..
T Consensus 148 ~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~ 181 (385)
T 3klj_A 148 KAFIIGGGILGIELAQAIIDSGTPASIGIILEYP 181 (385)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 69999999999999999999 9999999998754
No 251
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=90.59 E-value=0.15 Score=44.23 Aligned_cols=32 Identities=25% Similarity=0.367 Sum_probs=29.1
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-.++|||+|..|..+|..|.+ |.+|+++++.+
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 359999999999999999999 99999999764
No 252
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=90.49 E-value=0.14 Score=43.38 Aligned_cols=31 Identities=29% Similarity=0.598 Sum_probs=28.7
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-++|+|+|..|..+|..|++ |.+|+++|+.+
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 49999999999999999999 99999999753
No 253
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=90.03 E-value=0.17 Score=42.47 Aligned_cols=30 Identities=33% Similarity=0.509 Sum_probs=28.0
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
.++|||+|..|..+|..|++ |.+|.++++.
T Consensus 6 ~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 58999999999999999999 9999999975
No 254
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=89.70 E-value=0.18 Score=52.32 Aligned_cols=34 Identities=26% Similarity=0.402 Sum_probs=31.0
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
-.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 206 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERI 206 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcc
Confidence 369999999999999999999 9999999998643
No 255
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=89.20 E-value=0.21 Score=43.15 Aligned_cols=30 Identities=17% Similarity=0.249 Sum_probs=28.1
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
-++|+|+|..|..+|..|.+ |.+|+++|+.
T Consensus 5 ~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 5 HFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 48999999999999999999 9999999975
No 256
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=88.86 E-value=0.23 Score=51.50 Aligned_cols=33 Identities=27% Similarity=0.567 Sum_probs=30.6
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 204 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGE 204 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 479999999999999999999 999999999864
No 257
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=88.82 E-value=0.26 Score=47.90 Aligned_cols=33 Identities=24% Similarity=0.476 Sum_probs=30.2
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
-.++|||+|..|+-+|..|++ |.+|.|+|+...
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDA 186 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeeccccc
Confidence 369999999999999999999 999999998753
No 258
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=88.72 E-value=0.22 Score=50.09 Aligned_cols=33 Identities=36% Similarity=0.576 Sum_probs=30.5
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 177 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAM 177 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCe
Confidence 369999999999999999999 999999999864
No 259
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=86.61 E-value=0.34 Score=39.16 Aligned_cols=31 Identities=26% Similarity=0.356 Sum_probs=28.1
Q ss_pred cEEEECCCCchhHHHHhhhc-c-CeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-N-ATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g-~~VlvLE~G~ 73 (570)
.++|+|+|..|..+|..|.+ | .+|.++++.+
T Consensus 7 ~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 7 NICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 58999999999999999999 8 8999999763
No 260
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=86.38 E-value=0.32 Score=40.98 Aligned_cols=31 Identities=19% Similarity=0.406 Sum_probs=28.2
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.++|+|+|..|..+|..|.+ |.+|.++++..
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 49999999999999999999 99999998753
No 261
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=86.30 E-value=0.41 Score=48.82 Aligned_cols=33 Identities=39% Similarity=0.493 Sum_probs=30.6
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 179 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQPR 179 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCc
Confidence 469999999999999999999 999999999864
No 262
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=86.19 E-value=0.28 Score=51.20 Aligned_cols=34 Identities=29% Similarity=0.524 Sum_probs=30.9
Q ss_pred cccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
.-+++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 220 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDH 220 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCc
Confidence 3579999999999999999999 999999998863
No 263
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=85.65 E-value=0.41 Score=47.68 Aligned_cols=32 Identities=25% Similarity=0.522 Sum_probs=28.0
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
.|+|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 168 ~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~ 200 (369)
T 3d1c_A 168 QYVVIGGNESGFDAAYQLAKNGSDIALYTSTTG 200 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECC---
T ss_pred EEEEECCCcCHHHHHHHHHhcCCeEEEEecCCC
Confidence 69999999999999999999 999999999864
No 264
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=85.48 E-value=0.47 Score=49.65 Aligned_cols=34 Identities=24% Similarity=0.365 Sum_probs=30.8
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
-.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 229 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTC 229 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccch
Confidence 369999999999999999999 9999999998643
No 265
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=85.38 E-value=0.48 Score=48.88 Aligned_cols=32 Identities=25% Similarity=0.383 Sum_probs=29.6
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCe-EEEEccCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NAT-VLLLEKGG 73 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~-VlvLE~G~ 73 (570)
-.|+|||+|..|+-+|..|++ +.+ |.++++++
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 369999999999999999999 988 99999885
No 266
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=85.33 E-value=0.6 Score=48.46 Aligned_cols=32 Identities=16% Similarity=0.155 Sum_probs=29.7
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
.|+|||+|..|+-+|..|++ |.+|.++++.+.
T Consensus 199 ~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 199 TVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred EEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 69999999999999999999 999999998753
No 267
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=84.74 E-value=0.52 Score=49.20 Aligned_cols=33 Identities=21% Similarity=0.369 Sum_probs=30.5
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~ 219 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDG 219 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCc
Confidence 369999999999999999999 999999999864
No 268
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=84.33 E-value=0.72 Score=45.04 Aligned_cols=31 Identities=29% Similarity=0.367 Sum_probs=28.6
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.+.|||+|.-|+..|..|++ |.+|.++.|..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 48999999999999999999 99999999864
No 269
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=84.21 E-value=0.59 Score=48.49 Aligned_cols=33 Identities=24% Similarity=0.303 Sum_probs=30.4
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 205 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPR 205 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 369999999999999999999 999999999864
No 270
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=84.00 E-value=0.63 Score=47.91 Aligned_cols=33 Identities=15% Similarity=0.269 Sum_probs=30.7
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 149 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l 182 (437)
T 4eqs_A 149 KVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKI 182 (437)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCC
T ss_pred EEEEECCccchhhhHHHHHhcCCcceeeeeeccc
Confidence 69999999999999999999 9999999998753
No 271
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=83.99 E-value=0.62 Score=47.84 Aligned_cols=34 Identities=32% Similarity=0.497 Sum_probs=30.7
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
-.++|||+|..|+-+|..|++ |.+|.|+|+.+..
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~ 184 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARV 184 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcc
Confidence 369999999999999999999 9999999998643
No 272
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=83.82 E-value=0.65 Score=48.70 Aligned_cols=34 Identities=18% Similarity=0.277 Sum_probs=30.8
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
-.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 211 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRI 211 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSS
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCcc
Confidence 369999999999999999999 9999999998643
No 273
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=83.65 E-value=0.63 Score=48.00 Aligned_cols=33 Identities=24% Similarity=0.545 Sum_probs=30.6
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
.++|||+|..|+-+|..|++ |.+|.++|+++..
T Consensus 150 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 183 (449)
T 3kd9_A 150 NVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERV 183 (449)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 79999999999999999999 9999999998743
No 274
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=83.65 E-value=0.46 Score=43.63 Aligned_cols=30 Identities=30% Similarity=0.479 Sum_probs=28.1
Q ss_pred EEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 44 YIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 44 vIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
++|||+|..|..+|..|.+ |.+|+++|+.+
T Consensus 3 iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 3 VIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp EEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 8999999999999999999 99999999764
No 275
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=83.61 E-value=0.94 Score=46.78 Aligned_cols=60 Identities=8% Similarity=-0.051 Sum_probs=42.7
Q ss_pred CCCccccHHHhhhhcCCCCeEEEecceEEEEEec--CCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCcc
Q 008331 202 EDGHRHSAADLLEYADPEKLTVYLRAVVQRIKFT--ETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAI 276 (570)
Q Consensus 202 ~~g~r~~~~~~l~~~~~~g~~i~~~~~V~~i~~~--~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~ 276 (570)
..|...-...+...+.+.|++|+++++|++|..+ ++ ++++|.. +|+. + .++.||+|+|..
T Consensus 238 ~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~-----~~~~V~~---~g~~--~-----~ad~VV~a~~~~ 299 (453)
T 2bcg_G 238 MYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTG-----KFEGVKT---KLGT--F-----KAPLVIADPTYF 299 (453)
T ss_dssp TTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTT-----EEEEEEE---TTEE--E-----ECSCEEECGGGC
T ss_pred CCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCC-----eEEEEEE---CCeE--E-----ECCEEEECCCcc
Confidence 3444333334555566679999999999999987 44 8888875 4543 4 378999999985
No 276
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=83.46 E-value=0.69 Score=49.08 Aligned_cols=33 Identities=12% Similarity=0.261 Sum_probs=30.9
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
-.|+|||+|..|+-+|..|++ +.+|.|+++.+.
T Consensus 179 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 369999999999999999999 999999999975
No 277
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=83.45 E-value=0.66 Score=47.24 Aligned_cols=34 Identities=38% Similarity=0.658 Sum_probs=30.8
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
-.++|||+|..|+-+|..|++ |.+|.++|+.+..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~ 178 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLGLSVTILEAGDEL 178 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcc
Confidence 369999999999999999999 9999999998643
No 278
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=83.17 E-value=0.54 Score=48.84 Aligned_cols=33 Identities=15% Similarity=0.369 Sum_probs=30.4
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~ 211 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASE 211 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 369999999999999999999 999999999864
No 279
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=82.95 E-value=0.79 Score=44.84 Aligned_cols=57 Identities=11% Similarity=0.053 Sum_probs=40.9
Q ss_pred CCCeEEEecceEEEEEecCCCCCCCeEEEEEEEec-CCceEEEEecCCCCceEEEcCCccccHHHH
Q 008331 218 PEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDH-VGARHRACLNNGGKNEIILSAGAIGSPQLL 282 (570)
Q Consensus 218 ~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~-~G~~~~v~~~~~aa~~VVLaaGa~~tp~LL 282 (570)
+.|++++++++|++|..++++ .++.+|.+.+. +|+..++. ++.||+|+|.--.+.+|
T Consensus 207 ~~gv~i~~~~~v~~i~~~~~~---~~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~~ 264 (333)
T 1vdc_A 207 NPKIDVIWNSSVVEAYGDGER---DVLGGLKVKNVVTGDVSDLK-----VSGLFFAIGHEPATKFL 264 (333)
T ss_dssp CTTEEEECSEEEEEEEESSSS---SSEEEEEEEETTTCCEEEEE-----CSEEEECSCEEESCGGG
T ss_pred CCCeeEecCCceEEEeCCCCc---cceeeEEEEecCCCceEEEe-----cCEEEEEeCCccchHHh
Confidence 468999999999999876531 25777888753 56555563 79999999976544443
No 280
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=82.88 E-value=0.7 Score=45.31 Aligned_cols=31 Identities=19% Similarity=0.430 Sum_probs=28.7
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.+.|||+|.-|+..|..|++ |.+|.++.|..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 48999999999999999999 99999999864
No 281
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=82.84 E-value=0.77 Score=47.41 Aligned_cols=32 Identities=31% Similarity=0.425 Sum_probs=29.9
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 151 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 183 (452)
T 2cdu_A 151 TITIIGSGYIGAELAEAYSNQNYNVNLIDGHER 183 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred eEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 69999999999999999999 999999999864
No 282
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=82.77 E-value=0.72 Score=49.04 Aligned_cols=34 Identities=12% Similarity=0.316 Sum_probs=31.2
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
-.|+|||+|..|+-+|..|++ +.+|.|++|.+.+
T Consensus 192 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANY 226 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 369999999999999999999 9999999999853
No 283
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=82.18 E-value=1.6 Score=40.26 Aligned_cols=48 Identities=15% Similarity=0.283 Sum_probs=35.9
Q ss_pred hhcCC-CCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCcc
Q 008331 214 EYADP-EKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAI 276 (570)
Q Consensus 214 ~~~~~-~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~ 276 (570)
..+++ .|++++ +++|++|..+++ ++.+|.+. +|+. + .++.||+|+|.+
T Consensus 76 ~~~~~~~gv~i~-~~~v~~i~~~~~-----~v~~v~~~--~g~~--i-----~a~~VV~A~G~~ 124 (232)
T 2cul_A 76 YLLEGLRPLHLF-QATATGLLLEGN-----RVVGVRTW--EGPP--A-----RGEKVVLAVGSF 124 (232)
T ss_dssp HHHHTCTTEEEE-ECCEEEEEEETT-----EEEEEEET--TSCC--E-----ECSEEEECCTTC
T ss_pred HHHHcCCCcEEE-EeEEEEEEEeCC-----EEEEEEEC--CCCE--E-----ECCEEEECCCCC
Confidence 34445 499999 679999998765 77777753 6642 4 379999999985
No 284
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=82.06 E-value=0.87 Score=44.68 Aligned_cols=33 Identities=27% Similarity=0.452 Sum_probs=30.1
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
-.++|||+|..|+-+|..|++ |.+|.++++++.
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~ 189 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDE 189 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCc
Confidence 469999999999999999999 999999998753
No 285
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=81.98 E-value=0.82 Score=47.42 Aligned_cols=33 Identities=15% Similarity=0.274 Sum_probs=30.3
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
.++|||+|..|+-+|..|++ |.+|.++|+++..
T Consensus 178 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 211 (467)
T 1zk7_A 178 RLAVIGSSVVALELAQAFARLGSKVTVLARNTLF 211 (467)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEEECCcc
Confidence 68999999999999999999 9999999998643
No 286
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=81.52 E-value=0.96 Score=44.10 Aligned_cols=53 Identities=11% Similarity=0.239 Sum_probs=39.3
Q ss_pred CCeEEEecceEEEEEecCCCCCCCeEEEEEEEe-cCCceEEEEecCCCCceEEEcCCccccHHHH
Q 008331 219 EKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYD-HVGARHRACLNNGGKNEIILSAGAIGSPQLL 282 (570)
Q Consensus 219 ~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~-~~G~~~~v~~~~~aa~~VVLaaGa~~tp~LL 282 (570)
.|++++++++|++|..+ + ++.+|++.+ .+|+..++. ++.||+|+|.--.+.+|
T Consensus 201 ~gv~i~~~~~v~~i~~~-~-----~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~l 254 (325)
T 2q7v_A 201 PKMKFIWDTAVEEIQGA-D-----SVSGVKLRNLKTGEVSELA-----TDGVFIFIGHVPNTAFV 254 (325)
T ss_dssp TTEEEECSEEEEEEEES-S-----SEEEEEEEETTTCCEEEEE-----CSEEEECSCEEESCGGG
T ss_pred CCceEecCCceEEEccC-C-----cEEEEEEEECCCCcEEEEE-----cCEEEEccCCCCChHHH
Confidence 58999999999999864 3 678898875 357655564 79999999965443443
No 287
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=80.90 E-value=1.3 Score=43.58 Aligned_cols=37 Identities=22% Similarity=0.536 Sum_probs=31.1
Q ss_pred cccEEEECCCCchhHHHHhhhc-c-CeEEEEccCCCCCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-N-ATVLLLEKGGSPYE 77 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g-~~VlvLE~G~~~~~ 77 (570)
..-|+|||+|..|+.+|..|+. | .++.|++.......
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~S 72 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYS 72 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEeccc
Confidence 4569999999999999999999 8 57999998765443
No 288
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=80.64 E-value=0.83 Score=44.68 Aligned_cols=30 Identities=30% Similarity=0.400 Sum_probs=27.8
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
-|.|||+|..|...|..+|. |++|+|+|..
T Consensus 8 ~VaViGaG~MG~giA~~~a~~G~~V~l~D~~ 38 (319)
T 3ado_A 8 DVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred eEEEECCcHHHHHHHHHHHhCCCeEEEEECC
Confidence 48999999999999999999 9999999965
No 289
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=80.63 E-value=1 Score=41.58 Aligned_cols=29 Identities=24% Similarity=0.399 Sum_probs=27.1
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEcc
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEK 71 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~ 71 (570)
-++|||+|..|...|..|.+ |.+|.|+..
T Consensus 33 ~VLVVGgG~va~~ka~~Ll~~GA~VtVvap 62 (223)
T 3dfz_A 33 SVLVVGGGTIATRRIKGFLQEGAAITVVAP 62 (223)
T ss_dssp CEEEECCSHHHHHHHHHHGGGCCCEEEECS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEECC
Confidence 59999999999999999999 999999984
No 290
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=80.32 E-value=0.95 Score=42.59 Aligned_cols=33 Identities=27% Similarity=0.414 Sum_probs=29.2
Q ss_pred ccEEEECCCCchhHHHHhhhc-cC-eEEEEccCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKGGS 74 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G~~ 74 (570)
..|+|||+|..|+.+|..|+. |. ++.|+++...
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v 66 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTV 66 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCc
Confidence 469999999999999999999 96 8999997653
No 291
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=80.25 E-value=1.1 Score=43.70 Aligned_cols=34 Identities=26% Similarity=0.505 Sum_probs=30.8
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
-.++|||+|..|+-+|..|++ |.+|.++++++..
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~ 208 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHL 208 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc
Confidence 469999999999999999999 9999999988643
No 292
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=80.17 E-value=1 Score=45.63 Aligned_cols=34 Identities=24% Similarity=0.286 Sum_probs=30.8
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
-.++|||+|..|+-+|..|++ |.+|.++|+.+..
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~ 177 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRV 177 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcc
Confidence 369999999999999999999 9999999998753
No 293
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=80.07 E-value=1.1 Score=43.39 Aligned_cols=32 Identities=28% Similarity=0.438 Sum_probs=29.6
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
.++|||+|..|+-+|..|++ |.+|.++++++.
T Consensus 157 ~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~ 189 (319)
T 3cty_A 157 RVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPK 189 (319)
T ss_dssp EEEEECCSHHHHHHHHHHTTTBSEEEEECSSSS
T ss_pred eEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCc
Confidence 69999999999999999999 999999998764
No 294
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=80.01 E-value=1.1 Score=45.72 Aligned_cols=34 Identities=32% Similarity=0.440 Sum_probs=30.9
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
-.++|||+|..|+-+|..|++ |.+|.++|+.+..
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~ 187 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRV 187 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCch
Confidence 369999999999999999999 9999999998754
No 295
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=79.99 E-value=1 Score=46.62 Aligned_cols=34 Identities=21% Similarity=0.351 Sum_probs=30.8
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
-.++|||+|..|+-+|..|++ |.+|.++|+++..
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 207 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRA 207 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcC
Confidence 369999999999999999999 9999999998743
No 296
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=79.48 E-value=0.8 Score=43.68 Aligned_cols=30 Identities=20% Similarity=0.396 Sum_probs=27.8
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
-|+|||+|-.|...|..|.+ |.+|.|++..
T Consensus 15 ~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 15 RILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp EEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred EEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 49999999999999999999 9999999854
No 297
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=79.46 E-value=0.82 Score=47.36 Aligned_cols=31 Identities=35% Similarity=0.628 Sum_probs=28.8
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-+||+|+|-.|..+|..|.+ |.+|+|+|+.+
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 38999999999999999998 99999999764
No 298
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=79.40 E-value=1.1 Score=46.54 Aligned_cols=32 Identities=25% Similarity=0.361 Sum_probs=30.0
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 189 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 221 (478)
T 3dk9_A 189 RSVIVGAGYIAVEMAGILSALGSKTSLMIRHDK 221 (478)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCc
Confidence 69999999999999999999 999999999864
No 299
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=79.22 E-value=0.81 Score=44.23 Aligned_cols=31 Identities=26% Similarity=0.393 Sum_probs=28.5
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.+.|||+|.-|+..|..|++ |.+|.++.|..
T Consensus 4 kI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 48999999999999999999 99999999873
No 300
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=78.90 E-value=1 Score=44.44 Aligned_cols=30 Identities=33% Similarity=0.517 Sum_probs=28.0
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
.+.|||+|..|+..|..|++ |.+|.++.+.
T Consensus 5 kI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 48999999999999999999 9999999875
No 301
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=78.86 E-value=1.7 Score=41.30 Aligned_cols=32 Identities=9% Similarity=0.051 Sum_probs=29.1
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
-.++|||+|..|+-+|..|++ | +|.++++++.
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~ 174 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV 174 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC
T ss_pred CEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC
Confidence 469999999999999999999 9 9999998753
No 302
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=78.78 E-value=1.1 Score=42.97 Aligned_cols=31 Identities=16% Similarity=0.233 Sum_probs=28.3
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-|.|||+|..|..+|..|++ |.+|.+.++..
T Consensus 6 kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 38999999999999999999 99999998763
No 303
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=78.73 E-value=1.3 Score=40.28 Aligned_cols=31 Identities=16% Similarity=0.264 Sum_probs=28.5
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.+.|||+|..|...|..|++ |.+|.+.++..
T Consensus 21 ~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~ 52 (209)
T 2raf_A 21 EITIFGKGNMGQAIGHNFEIAGHEVTYYGSKD 52 (209)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 58999999999999999999 99999998764
No 304
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=78.71 E-value=1.1 Score=43.40 Aligned_cols=31 Identities=26% Similarity=0.513 Sum_probs=28.4
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-|.|||+|..|..+|..|++ |.+|.++++..
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 38999999999999999999 99999998763
No 305
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=78.65 E-value=1 Score=48.40 Aligned_cols=30 Identities=13% Similarity=0.268 Sum_probs=28.6
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
.++|||+|..|+-+|..|++ |.+|.|+|++
T Consensus 288 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 59999999999999999999 9999999987
No 306
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=78.47 E-value=1.2 Score=42.51 Aligned_cols=30 Identities=17% Similarity=0.128 Sum_probs=28.0
Q ss_pred EEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 44 YIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 44 vIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
+.|||+|..|...|..|++ |.+|.++++..
T Consensus 3 i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 3 ITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 7899999999999999999 99999998864
No 307
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=78.34 E-value=1 Score=46.13 Aligned_cols=60 Identities=15% Similarity=0.038 Sum_probs=42.4
Q ss_pred CCCccccHHHhhhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCcc
Q 008331 202 EDGHRHSAADLLEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAI 276 (570)
Q Consensus 202 ~~g~r~~~~~~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~ 276 (570)
..|...-...+...+++.|++|+++++|++|..+++ ++++|.. +|+. + .++.||+|+|..
T Consensus 230 ~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~-----~v~~v~~---~g~~--~-----~ad~VV~a~~~~ 289 (433)
T 1d5t_A 230 LYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMENG-----KVVGVKS---EGEV--A-----RCKQLICDPSYV 289 (433)
T ss_dssp TTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEEETT-----EEEEEEE---TTEE--E-----ECSEEEECGGGC
T ss_pred CcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEeCC-----EEEEEEE---CCeE--E-----ECCEEEECCCCC
Confidence 444333333345555667999999999999998765 8888763 5643 4 379999999975
No 308
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=78.34 E-value=0.9 Score=38.52 Aligned_cols=31 Identities=19% Similarity=0.270 Sum_probs=27.8
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-+.|||+|..|..+|..|++ |.+|.+.++..
T Consensus 23 ~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 23 KILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp EEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 48999999999999999999 98899998763
No 309
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=78.27 E-value=1.2 Score=39.50 Aligned_cols=31 Identities=23% Similarity=0.227 Sum_probs=28.0
Q ss_pred cEEEECCCCchhHHHHhhhc--cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ--NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~--g~~VlvLE~G~ 73 (570)
.++|||.|..|..+|..|.+ |.+|+++|+.+
T Consensus 41 ~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 41 QVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 59999999999999999986 79999999764
No 310
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=77.91 E-value=1.3 Score=44.26 Aligned_cols=33 Identities=27% Similarity=0.490 Sum_probs=29.7
Q ss_pred cccEEEECCCCchhHHHHhhhc-cC-eEEEEccCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKGG 73 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G~ 73 (570)
+.-|||+|+|.+|..+|..|.. |. +|.|+++.+
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 3469999999999999999999 98 899999875
No 311
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=77.26 E-value=3 Score=44.84 Aligned_cols=61 Identities=16% Similarity=0.127 Sum_probs=42.8
Q ss_pred CCCccccHHHhhhhcCCCCeEEEecceEEEEEecCC-CCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCc
Q 008331 202 EDGHRHSAADLLEYADPEKLTVYLRAVVQRIKFTET-GRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGA 275 (570)
Q Consensus 202 ~~g~r~~~~~~l~~~~~~g~~i~~~~~V~~i~~~~~-~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa 275 (570)
..|...-+..+.+.+...|.+|++++.|++|+.+++ + +++||. +.+|+. +. ++.||..+..
T Consensus 374 ~GG~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g----~v~gV~--~~~Ge~--i~-----A~~VVs~~~~ 435 (650)
T 1vg0_A 374 LYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESR----KCKAVI--DQFGQR--II-----SKHFIIEDSY 435 (650)
T ss_dssp TTCTTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTC----CEEEEE--ETTSCE--EE-----CSEEEEEGGG
T ss_pred CCchhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCC----eEEEEE--eCCCCE--EE-----cCEEEEChhh
Confidence 344333344455667778999999999999999873 3 899987 346764 43 6888875553
No 312
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=77.09 E-value=1.4 Score=43.08 Aligned_cols=31 Identities=23% Similarity=0.419 Sum_probs=28.3
Q ss_pred cEEEECCCCchhHHHHhhhc-cC--eEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NA--TVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~--~VlvLE~G~ 73 (570)
-+.|||+|..|..+|..|++ |. +|.++++..
T Consensus 9 kI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 9 KLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 59999999999999999999 87 999999763
No 313
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=76.82 E-value=1.5 Score=44.32 Aligned_cols=32 Identities=22% Similarity=0.272 Sum_probs=29.0
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
--|+|||+|.+|..+|..|.. |.+|.++++.+
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 469999999999999999988 99999999765
No 314
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=76.44 E-value=1.4 Score=43.97 Aligned_cols=34 Identities=18% Similarity=0.337 Sum_probs=29.8
Q ss_pred cccEEEECCCCchhHHHHhhhc-cC-eEEEEccCCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKGGS 74 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G~~ 74 (570)
+.-|+|+|+|.+|..+|..|.. |. +|.|+++-+.
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gl 227 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGI 227 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEE
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCc
Confidence 4469999999999999999999 97 7999998753
No 315
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=76.41 E-value=1.6 Score=42.12 Aligned_cols=34 Identities=26% Similarity=0.350 Sum_probs=31.1
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
-.++|||+|..|+-+|..|++ |.+|.++++++..
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~ 189 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTF 189 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCC
Confidence 469999999999999999999 9999999998754
No 316
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=76.34 E-value=1.3 Score=45.09 Aligned_cols=31 Identities=23% Similarity=0.263 Sum_probs=29.0
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.|||||.|-.|..+|..|.+ |.+|++||+.+
T Consensus 6 ~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 6 RVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred eEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 49999999999999999999 99999999775
No 317
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=76.25 E-value=1.5 Score=46.36 Aligned_cols=31 Identities=13% Similarity=0.127 Sum_probs=28.8
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.++|||+|+.|+=.|..++. |.+|.|+++..
T Consensus 225 ~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~ 256 (542)
T 4b1b_A 225 KTLVVGASYVALECSGFLNSLGYDVTVAVRSI 256 (542)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEEESSC
T ss_pred eEEEECCCHHHHHHHHHHHhcCCeEEEecccc
Confidence 59999999999999999999 99999999754
No 318
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=76.17 E-value=2 Score=37.63 Aligned_cols=56 Identities=18% Similarity=0.113 Sum_probs=38.4
Q ss_pred hhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCccccHHHHHHhCC
Q 008331 213 LEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIGSPQLLMLSGV 287 (570)
Q Consensus 213 l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~tp~LLl~SGi 287 (570)
...+++.|++++++ +|+++..+++ . +.+...+| ++ .++.||+|+|.. |.++...|+
T Consensus 63 ~~~~~~~gv~v~~~-~v~~i~~~~~-----~---~~v~~~~g---~i-----~ad~vI~A~G~~--~~~~~~~g~ 118 (180)
T 2ywl_A 63 EAHARRYGAEVRPG-VVKGVRDMGG-----V---FEVETEEG---VE-----KAERLLLCTHKD--PTLPSLLGL 118 (180)
T ss_dssp HHHHHHTTCEEEEC-CCCEEEECSS-----S---EEEECSSC---EE-----EEEEEEECCTTC--CHHHHHHTC
T ss_pred HHHHHHcCCEEEeC-EEEEEEEcCC-----E---EEEEECCC---EE-----EECEEEECCCCC--CCccccCCC
Confidence 34556679999999 9999987654 2 23333455 34 369999999974 456566654
No 319
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=75.95 E-value=2.3 Score=40.03 Aligned_cols=33 Identities=27% Similarity=0.416 Sum_probs=28.8
Q ss_pred ccEEEECCCCchhHHHHhhhc-cC-eEEEEccCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKGGS 74 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G~~ 74 (570)
.-|+|||+|..|+.+|..|+. |. ++.|++....
T Consensus 29 ~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v 63 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDV 63 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBC
T ss_pred CcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 469999999999999999999 85 7889887654
No 320
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=75.71 E-value=1.5 Score=42.45 Aligned_cols=31 Identities=29% Similarity=0.420 Sum_probs=28.1
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.+.|||+|..|...|..|++ |.+|.++++.+
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 48999999999999999999 99999998753
No 321
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=75.19 E-value=1.6 Score=43.63 Aligned_cols=32 Identities=19% Similarity=0.192 Sum_probs=29.1
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
--|+|||+|..|..+|..|.. |.+|.++++.+
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999998 99999999764
No 322
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=75.02 E-value=1.5 Score=45.50 Aligned_cols=32 Identities=25% Similarity=0.424 Sum_probs=29.0
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.-+.|||+|..|+..|..|++ |.+|.++++..
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 458999999999999999999 99999998753
No 323
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=74.83 E-value=2.1 Score=43.95 Aligned_cols=30 Identities=27% Similarity=0.275 Sum_probs=27.7
Q ss_pred EEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 44 YIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 44 vIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
+.|||+|..|+..|..|++ |.+|.++++.+
T Consensus 3 I~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 3 ISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 7899999999999999999 99999998753
No 324
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=74.78 E-value=2.5 Score=44.80 Aligned_cols=35 Identities=23% Similarity=0.584 Sum_probs=30.1
Q ss_pred ccEEEECCCCchhHHHHhhhc-cC-eEEEEccCCCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKGGSPY 76 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G~~~~ 76 (570)
.-|+|||+|..|+.+|..|+. |. ++.|++......
T Consensus 328 ~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve~ 364 (598)
T 3vh1_A 328 TKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSY 364 (598)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCCT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCcccc
Confidence 459999999999999999999 84 799999776544
No 325
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=74.46 E-value=1.6 Score=42.57 Aligned_cols=29 Identities=28% Similarity=0.582 Sum_probs=26.6
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
.+.|||+|.-|+..|..|++ |.+|.++ +-
T Consensus 21 kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 21 KVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred cEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 48999999999999999999 9999998 54
No 326
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=74.05 E-value=1.6 Score=45.87 Aligned_cols=30 Identities=17% Similarity=0.239 Sum_probs=28.2
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
.++|||+|..|+-+|..|++ |.+|.|+|+.
T Consensus 212 ~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 212 KTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred eEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 59999999999999999999 9999999985
No 327
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=73.29 E-value=2.2 Score=41.00 Aligned_cols=34 Identities=18% Similarity=0.331 Sum_probs=30.6
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
-.++|||+|..|+-+|..|++ +.+|.++++++..
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF 182 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence 369999999999999999999 9999999988643
No 328
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=73.00 E-value=1.9 Score=43.64 Aligned_cols=32 Identities=16% Similarity=0.309 Sum_probs=28.5
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
--|+|||+|.+|..+|..|.. |.+|+++++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 359999999999999999988 99999998764
No 329
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=72.97 E-value=1.9 Score=42.20 Aligned_cols=28 Identities=25% Similarity=0.413 Sum_probs=26.7
Q ss_pred EEEECCCCchhHHHHhhhc-cCeEEEEcc
Q 008331 44 YIIVGGGTSGCPLAATLSQ-NATVLLLEK 71 (570)
Q Consensus 44 vIIVGsG~aG~~~A~~La~-g~~VlvLE~ 71 (570)
+.|||+|..|...|..|++ |.+|.++++
T Consensus 3 I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 3 VSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 7899999999999999999 999999987
No 330
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=72.94 E-value=2 Score=40.89 Aligned_cols=30 Identities=13% Similarity=0.324 Sum_probs=27.5
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
-++|+|+|..|..+|..|++ |.+|.|..|.
T Consensus 121 ~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 121 RILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 49999999999999999999 9999999765
No 331
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=72.76 E-value=2.2 Score=41.03 Aligned_cols=35 Identities=26% Similarity=0.377 Sum_probs=29.9
Q ss_pred cccEEEECCCCchhHHHHhhhc-c-CeEEEEccCCCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-N-ATVLLLEKGGSP 75 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g-~~VlvLE~G~~~ 75 (570)
..-|+|||+|..|+.+|..|+. | .++.|++.....
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve 72 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVE 72 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC-
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccC
Confidence 4679999999999999999999 8 579999876543
No 332
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=72.66 E-value=2.7 Score=43.29 Aligned_cols=31 Identities=23% Similarity=0.255 Sum_probs=28.7
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-|.|||.|.+|+++|..|.+ |++|.+.|+..
T Consensus 11 ~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 11 KVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp EEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 48999999999999999999 99999999865
No 333
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=72.64 E-value=2 Score=44.43 Aligned_cols=30 Identities=33% Similarity=0.370 Sum_probs=27.6
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
-++|+|+|..|..+|.+|+. |.+|++.|+.
T Consensus 267 tVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~ 297 (488)
T 3ond_A 267 VAVVAGYGDVGKGCAAALKQAGARVIVTEID 297 (488)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 48999999999999999999 9999999865
No 334
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=72.58 E-value=2 Score=45.05 Aligned_cols=33 Identities=27% Similarity=0.426 Sum_probs=28.3
Q ss_pred cEEEECCCCchhHHHHhhhc-c--------------CeEEEEccCCCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-N--------------ATVLLLEKGGSP 75 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g--------------~~VlvLE~G~~~ 75 (570)
.++|||+|+.|+-+|..|++ + .+|.|+|+++..
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~i 266 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIV 266 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSS
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEecccccc
Confidence 49999999999999988875 3 689999999754
No 335
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=72.46 E-value=1.6 Score=40.45 Aligned_cols=30 Identities=20% Similarity=0.193 Sum_probs=27.6
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.++|+|+|..|..+|..|.+ |. |+++|+.+
T Consensus 11 ~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 11 HVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp EEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred EEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 59999999999999999999 99 99999764
No 336
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=72.09 E-value=2.2 Score=41.76 Aligned_cols=31 Identities=26% Similarity=0.448 Sum_probs=28.1
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-.++|||+|..|+-+|..|++ + +|.++++..
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 469999999999999999999 8 799999874
No 337
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=72.03 E-value=2.1 Score=42.10 Aligned_cols=31 Identities=16% Similarity=0.253 Sum_probs=28.2
Q ss_pred cEEEECCCCchhHHHHhhhc-cC-eEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G~ 73 (570)
-+.|||+|..|..+|..|+. |. +|.++++..
T Consensus 11 kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 11 KVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 59999999999999999999 87 999998764
No 338
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=71.98 E-value=2.1 Score=44.17 Aligned_cols=33 Identities=21% Similarity=0.319 Sum_probs=29.0
Q ss_pred ccEEEECCCCchhHHHHhhhc-cC-eEEEEccCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKGGS 74 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G~~ 74 (570)
-.|+|||+|..|+-+|..|.+ |. +|.++++.+.
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 369999999999999999988 86 5999998864
No 339
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=71.96 E-value=2.1 Score=42.41 Aligned_cols=31 Identities=29% Similarity=0.474 Sum_probs=28.2
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.+.|||+|..|...|..|++ |.+|.++++.+
T Consensus 6 ki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 6 TYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 58999999999999999999 99999998753
No 340
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=71.79 E-value=2.4 Score=38.41 Aligned_cols=29 Identities=21% Similarity=0.337 Sum_probs=26.9
Q ss_pred EEEEC-CCCchhHHHHhhhc-cCeEEEEccC
Q 008331 44 YIIVG-GGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 44 vIIVG-sG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
+.||| +|..|..+|..|++ |.+|.++++.
T Consensus 3 i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 3 VALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 78999 99999999999999 9999999875
No 341
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=71.67 E-value=2.4 Score=44.96 Aligned_cols=36 Identities=22% Similarity=0.549 Sum_probs=30.6
Q ss_pred cccEEEECCCCchhHHHHhhhc-c-CeEEEEccCCCCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-N-ATVLLLEKGGSPY 76 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g-~~VlvLE~G~~~~ 76 (570)
..-|+|||+|..|+.+|..|+. | .++.|++......
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve~ 363 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSY 363 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCcc
Confidence 3469999999999999999999 8 5799999776543
No 342
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=71.65 E-value=2.3 Score=43.89 Aligned_cols=54 Identities=13% Similarity=0.081 Sum_probs=37.1
Q ss_pred CCCeEEEecceEEEEEecCCCCCCCeEEEEEEEec-------------CCceEEEEecCCCCceEEEcCCccccH
Q 008331 218 PEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDH-------------VGARHRACLNNGGKNEIILSAGAIGSP 279 (570)
Q Consensus 218 ~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~-------------~G~~~~v~~~~~aa~~VVLaaGa~~tp 279 (570)
+.|+++++++.+++|.-++++ .++.+|++.+. +|+..++ .++.||+|+|.-..+
T Consensus 269 ~~gv~~~~~~~~~~i~~~~~~---~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i-----~~d~Vi~a~G~~p~~ 335 (460)
T 1cjc_A 269 SRAWGLRFFRSPQQVLPSPDG---RRAAGIRLAVTRLEGIGEATRAVPTGDVEDL-----PCGLVLSSIGYKSRP 335 (460)
T ss_dssp SEEEEEECSEEEEEEEECTTS---SSEEEEEEEEEEEESSGGGCEEEEEEEEEEE-----ECSEEEECCCEECCC
T ss_pred CceEEEECCCChheEEcCCCC---ceEEEEEEEEEEEccccCCCcccCCCceEEE-----EcCEEEECCCCCCCC
Confidence 468999999999999765321 15777776531 3443455 479999999976554
No 343
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=71.15 E-value=2.2 Score=42.50 Aligned_cols=32 Identities=25% Similarity=0.343 Sum_probs=28.5
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
--|+|+|+|.+|..+|..|.. |.+|.++++.+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 359999999999999999998 99999998763
No 344
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=70.96 E-value=2.2 Score=43.91 Aligned_cols=31 Identities=26% Similarity=0.342 Sum_probs=28.6
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.+.|||+|..|+.+|..|++ |.+|.++++..
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 48999999999999999999 99999999764
No 345
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=70.87 E-value=2.3 Score=41.19 Aligned_cols=30 Identities=23% Similarity=0.368 Sum_probs=27.2
Q ss_pred EEEECCCCchhHHHHhhhc-cC--eEEEEccCC
Q 008331 44 YIIVGGGTSGCPLAATLSQ-NA--TVLLLEKGG 73 (570)
Q Consensus 44 vIIVGsG~aG~~~A~~La~-g~--~VlvLE~G~ 73 (570)
+.|||+|..|..+|..|+. |. .|.++|...
T Consensus 3 I~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 3 VGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 7899999999999999999 87 899998753
No 346
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=70.85 E-value=2.2 Score=41.67 Aligned_cols=31 Identities=29% Similarity=0.370 Sum_probs=28.2
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-|.|||+|.-|...|..|++ |++|.+.++.+
T Consensus 8 kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 8 DVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred eEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 38899999999999999999 99999998764
No 347
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=70.82 E-value=2.3 Score=42.57 Aligned_cols=32 Identities=31% Similarity=0.420 Sum_probs=28.5
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
--++|+|+|..|..+|..|+. |.+|+++++.+
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 358999999999999999999 99999998653
No 348
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=70.54 E-value=2.4 Score=43.83 Aligned_cols=31 Identities=23% Similarity=0.347 Sum_probs=28.5
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.|.|||+|..|..+|..|++ |.+|+++++..
T Consensus 39 kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 48999999999999999999 99999998764
No 349
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=70.47 E-value=3 Score=40.61 Aligned_cols=31 Identities=23% Similarity=0.441 Sum_probs=28.3
Q ss_pred cEEEECCCCchhHHHHhhhc-cC-eEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G~ 73 (570)
-+.|||+|..|..+|..|++ |. +|.++++..
T Consensus 6 kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 6 KIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 48999999999999999999 97 999999764
No 350
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=70.43 E-value=2.5 Score=42.47 Aligned_cols=32 Identities=22% Similarity=0.300 Sum_probs=28.5
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-.|+|+|+|.+|..+|..|.. |.+|.+.++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 369999999999999999988 99999998764
No 351
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=70.27 E-value=2.5 Score=41.52 Aligned_cols=33 Identities=21% Similarity=0.437 Sum_probs=29.3
Q ss_pred CcccEEEECCCCchhHHHHhhhc-cCeEEEEccC
Q 008331 40 SYYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 40 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
.+.-+.|||+|.-|+..|..|++ |.+|.+..+.
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 35679999999999999999999 9999999875
No 352
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=69.81 E-value=1.4 Score=45.49 Aligned_cols=65 Identities=12% Similarity=0.061 Sum_probs=41.8
Q ss_pred CCCccccHHHhhhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCccccHHH
Q 008331 202 EDGHRHSAADLLEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIGSPQL 281 (570)
Q Consensus 202 ~~g~r~~~~~~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~tp~L 281 (570)
..|.......+...+.+.|++|+++++|++|..+++ ++..|.+ ++.. + .++.||+|+++....+|
T Consensus 230 ~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~-----~~~~v~~---~~~~--~-----~ad~vv~a~p~~~~~~l 294 (477)
T 3nks_A 230 RGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAE-----GRWKVSL---RDSS--L-----EADHVISAIPASVLSEL 294 (477)
T ss_dssp TTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEECGG-----GCEEEEC---SSCE--E-----EESEEEECSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCC-----ceEEEEE---CCeE--E-----EcCEEEECCCHHHHHHh
Confidence 344333333344455567999999999999998765 3334432 3432 3 36999999987555544
No 353
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=69.80 E-value=2.4 Score=43.34 Aligned_cols=33 Identities=15% Similarity=0.132 Sum_probs=29.5
Q ss_pred cccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
...+.|||.|..|+.+|..||+ |.+|+.+|...
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 4579999999999999999999 99999998653
No 354
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=69.75 E-value=3.6 Score=42.35 Aligned_cols=31 Identities=26% Similarity=0.464 Sum_probs=28.7
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-|.|||+|.-|...|..|++ |.+|++.++..
T Consensus 56 kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 56 SVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 48999999999999999999 99999999764
No 355
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=69.68 E-value=2.8 Score=40.69 Aligned_cols=31 Identities=29% Similarity=0.335 Sum_probs=27.9
Q ss_pred cEEEECCCCchhHHHHhhhccCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQNATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~g~~VlvLE~G~ 73 (570)
.+.|||+|..|+..|..|+.|.+|.++.|..
T Consensus 4 kI~IiGaGa~G~~~a~~L~~g~~V~~~~r~~ 34 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLSLYHDVTVVTRRQ 34 (307)
T ss_dssp EEEEECCSHHHHHHHHHHHTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhcCCceEEEECCH
Confidence 4899999999999999998778999999874
No 356
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=69.42 E-value=2.6 Score=38.47 Aligned_cols=31 Identities=23% Similarity=0.233 Sum_probs=28.1
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.+.|||+|..|...|..|++ |.+|.++++..
T Consensus 30 ~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 30 KVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred EEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 59999999999999999999 99999998753
No 357
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=69.25 E-value=3.8 Score=39.42 Aligned_cols=32 Identities=19% Similarity=0.315 Sum_probs=29.2
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-.+.|||.|..|...|..|++ |.+|.+.++.+
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 359999999999999999999 99999998765
No 358
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=69.18 E-value=2.7 Score=41.83 Aligned_cols=32 Identities=28% Similarity=0.355 Sum_probs=29.0
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-.+.|||+|.-|.+.|..|++ |.+|.+..+.+
T Consensus 30 mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 359999999999999999999 99999998753
No 359
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=69.07 E-value=2.6 Score=42.27 Aligned_cols=31 Identities=32% Similarity=0.497 Sum_probs=28.2
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
--++|||+|..|..+|..|.. |.+|++.++.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDIN 200 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 459999999999999999998 9999999865
No 360
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=69.07 E-value=2.8 Score=39.79 Aligned_cols=32 Identities=28% Similarity=0.447 Sum_probs=28.8
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
--++|+|+|.+|.++|..|++ |.+|.|..|..
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 359999999999999999999 99999998764
No 361
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=69.06 E-value=2.7 Score=41.27 Aligned_cols=31 Identities=26% Similarity=0.411 Sum_probs=28.1
Q ss_pred cEEEECCCCchhHHHHhhhc-cC-eEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G~ 73 (570)
-+.|||+|..|..+|..|+. |. +|.++|...
T Consensus 16 kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 16 KISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 59999999999999999999 87 999999753
No 362
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=68.68 E-value=4.5 Score=42.21 Aligned_cols=50 Identities=20% Similarity=0.122 Sum_probs=37.6
Q ss_pred hhhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCc
Q 008331 212 LLEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGA 275 (570)
Q Consensus 212 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa 275 (570)
+...+.+.|++++.+ +|++|..++++ ++++|+.. +|+ ++ .++.||.|+|+
T Consensus 179 L~~~a~~~gv~~~~~-~v~~i~~~~~~----~~~~v~~~--~g~--~~-----~ad~vV~A~G~ 228 (511)
T 2weu_A 179 LSEYAIARGVRHVVD-DVQHVGQDERG----WISGVHTK--QHG--EI-----SGDLFVDCTGF 228 (511)
T ss_dssp HHHHHHHTTCEEEEC-CEEEEEECTTS----CEEEEEES--SSC--EE-----ECSEEEECCGG
T ss_pred HHHHHHHCCCEEEEC-eEeEEEEcCCC----CEEEEEEC--CCC--EE-----EcCEEEECCCc
Confidence 344555679999999 99999986553 67777764 564 34 37999999997
No 363
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=68.55 E-value=3.7 Score=39.29 Aligned_cols=31 Identities=29% Similarity=0.446 Sum_probs=28.2
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.+.|||.|..|...|..|++ |.+|.+.++.+
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 37899999999999999999 99999998764
No 364
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=67.93 E-value=2.9 Score=46.01 Aligned_cols=31 Identities=16% Similarity=0.101 Sum_probs=29.1
Q ss_pred cEEEEC--CCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVG--GGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVG--sG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.|+||| +|..|+-+|..|++ |.+|.|+|+++
T Consensus 530 ~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 530 RVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp EEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred eEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 699998 89999999999999 99999999886
No 365
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=67.89 E-value=6.4 Score=40.75 Aligned_cols=51 Identities=10% Similarity=0.018 Sum_probs=35.6
Q ss_pred HhhhhcCCCC-eEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCcc
Q 008331 211 DLLEYADPEK-LTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAI 276 (570)
Q Consensus 211 ~~l~~~~~~g-~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~ 276 (570)
.+...+.+.| ++|+++++|++|..+++ . |.+...+|+. + .++.||+|+|.-
T Consensus 260 ~l~~~l~~~g~~~i~~~~~V~~i~~~~~-----~---v~v~~~~g~~--~-----~ad~vI~a~~~~ 311 (495)
T 2vvm_A 260 RFWEEAAGTGRLGYVFGCPVRSVVNERD-----A---ARVTARDGRE--F-----VAKRVVCTIPLN 311 (495)
T ss_dssp HHHHHHHTTTCEEEESSCCEEEEEECSS-----S---EEEEETTCCE--E-----EEEEEEECCCGG
T ss_pred HHHHHhhhcCceEEEeCCEEEEEEEcCC-----E---EEEEECCCCE--E-----EcCEEEECCCHH
Confidence 3444455566 99999999999988665 3 3334346653 3 369999999963
No 366
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=67.87 E-value=3.2 Score=40.10 Aligned_cols=31 Identities=13% Similarity=0.232 Sum_probs=27.7
Q ss_pred cEEEECCCCchhHHHHhhhc-cC-eEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G~ 73 (570)
.++|+|+|.+|..+|..|++ |. +|.|..|..
T Consensus 143 ~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 143 RILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred EEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 59999999999999999999 97 899998753
No 367
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=67.80 E-value=3.9 Score=39.34 Aligned_cols=31 Identities=19% Similarity=0.333 Sum_probs=28.2
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-+.|||.|..|...|..|++ |.+|.+.++..
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 48899999999999999999 99999998763
No 368
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=67.72 E-value=2.4 Score=42.18 Aligned_cols=31 Identities=26% Similarity=0.377 Sum_probs=28.3
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.|.|||+|..|...|..|++ |.+|.++++..
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 49999999999999999999 99999998753
No 369
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=67.71 E-value=4.4 Score=42.17 Aligned_cols=37 Identities=24% Similarity=0.449 Sum_probs=32.6
Q ss_pred CCcccEEEECCCCchhHHHHhhhc---cCeEEEEccCCCC
Q 008331 39 ISYYDYIIVGGGTSGCPLAATLSQ---NATVLLLEKGGSP 75 (570)
Q Consensus 39 ~~~~DvIIVGsG~aG~~~A~~La~---g~~VlvLE~G~~~ 75 (570)
...+||||||+|+||+.+|..|++ |.+|+|+|+.+..
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~ 48 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPEL 48 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 457899999999999999988876 6899999998754
No 370
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=67.42 E-value=4.1 Score=39.75 Aligned_cols=32 Identities=19% Similarity=0.379 Sum_probs=28.9
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-.+.|||.|..|...|..|++ |.+|.+.++.+
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 359999999999999999999 99999998764
No 371
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=67.38 E-value=3 Score=41.47 Aligned_cols=30 Identities=17% Similarity=0.248 Sum_probs=27.3
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
-|+|+|+|..|..+|..|.+ |.+|++.++.
T Consensus 175 tV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 175 AVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 48999999999999999999 9999998753
No 372
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=67.10 E-value=3.2 Score=38.71 Aligned_cols=32 Identities=22% Similarity=0.368 Sum_probs=28.9
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
..+-|||+|..|..+|..|++ |.+|.+.++.+
T Consensus 20 ~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 20 MKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 458999999999999999999 99999998764
No 373
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=67.01 E-value=4.2 Score=38.85 Aligned_cols=32 Identities=13% Similarity=0.266 Sum_probs=28.0
Q ss_pred ccEEEECCCCchhHHHHhhhc-cC-eEEEEccCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKGG 73 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G~ 73 (570)
-.++|+|+|.+|.++|..|++ |. +|.|+.|..
T Consensus 123 k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 359999999999999999999 97 899987753
No 374
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=66.96 E-value=3.1 Score=39.99 Aligned_cols=31 Identities=19% Similarity=0.318 Sum_probs=28.3
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-+.|||.|..|..+|..|.. |.+|++.++..
T Consensus 157 ~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 157 NVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred EEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 49999999999999999999 99999998753
No 375
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=66.90 E-value=3.2 Score=40.56 Aligned_cols=30 Identities=27% Similarity=0.284 Sum_probs=27.3
Q ss_pred EEEECCCCchhHHHHhhhc-cC--eEEEEccCC
Q 008331 44 YIIVGGGTSGCPLAATLSQ-NA--TVLLLEKGG 73 (570)
Q Consensus 44 vIIVGsG~aG~~~A~~La~-g~--~VlvLE~G~ 73 (570)
+.|||+|..|..+|..|++ |. .|.++++..
T Consensus 3 I~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 3 IGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 7899999999999999999 88 899998753
No 376
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=66.66 E-value=3.4 Score=39.81 Aligned_cols=30 Identities=27% Similarity=0.401 Sum_probs=27.7
Q ss_pred cEEEEC-CCCchhHHHHhhhc-cCeEEEEccC
Q 008331 43 DYIIVG-GGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 43 DvIIVG-sG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
-+.||| .|..|...|..|++ |.+|.++++.
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~ 54 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRASGYPISILDRE 54 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCEEEECTT
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 499999 99999999999999 9999999865
No 377
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=66.51 E-value=3 Score=41.42 Aligned_cols=34 Identities=18% Similarity=0.379 Sum_probs=29.3
Q ss_pred cccEEEECCCCchhHHHHhhhc-c-CeEEEEccCCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-N-ATVLLLEKGGS 74 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g-~~VlvLE~G~~ 74 (570)
..-|+|||+|..|+.+|..|+. | .++.|++....
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~V 153 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQI 153 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcC
Confidence 3469999999999999999999 8 47999987653
No 378
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=66.36 E-value=3.7 Score=41.92 Aligned_cols=31 Identities=23% Similarity=0.351 Sum_probs=28.4
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
..-|||.|..|+..|..|++ |.+|+++++..
T Consensus 13 ~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 13 KLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 46799999999999999999 99999999764
No 379
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=65.93 E-value=3.5 Score=39.54 Aligned_cols=29 Identities=21% Similarity=0.489 Sum_probs=26.3
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
-++|+|+|..|..+|..|++ | +|.+..|.
T Consensus 130 ~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 130 NIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp EEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 48999999999999999999 9 99998765
No 380
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=65.85 E-value=3.4 Score=40.39 Aligned_cols=31 Identities=29% Similarity=0.454 Sum_probs=27.7
Q ss_pred cEEEECCCCchhHHHHhhhc-cC-eEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G~ 73 (570)
-|.|||+|..|..+|..|+. |+ +|.++|...
T Consensus 6 kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 6 KIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 48999999999999999999 87 899998653
No 381
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=65.65 E-value=3.4 Score=39.85 Aligned_cols=31 Identities=23% Similarity=0.381 Sum_probs=28.3
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-+.|||.|..|..+|..|.. |.+|++.++..
T Consensus 159 ~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 159 QVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred EEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 59999999999999999999 99999998753
No 382
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=65.65 E-value=2.5 Score=40.22 Aligned_cols=31 Identities=19% Similarity=0.283 Sum_probs=28.0
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-++|+|+|.+|..+|..|++ |.+|.|..|..
T Consensus 121 ~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 121 HVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp EEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred EEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 59999999999999999999 99999998763
No 383
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=65.64 E-value=2.8 Score=43.05 Aligned_cols=32 Identities=16% Similarity=0.262 Sum_probs=28.9
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
-|.|||.|.+|+.+|..|++ |.+|.+.|....
T Consensus 7 ~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 7 NVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp CEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred EEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 38999999999999999999 999999998654
No 384
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=65.58 E-value=3.7 Score=43.35 Aligned_cols=34 Identities=15% Similarity=0.350 Sum_probs=30.7
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
-.|+|||+|..|+-+|..|++ +.+|.|++|.+.+
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHF 221 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcc
Confidence 368999999999999999999 9999999998744
No 385
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=65.46 E-value=3.6 Score=39.32 Aligned_cols=31 Identities=19% Similarity=0.408 Sum_probs=28.2
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.+.|||.|..|...|..|++ |.+|.+.++.+
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 37899999999999999999 99999998764
No 386
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=65.37 E-value=3.8 Score=42.35 Aligned_cols=34 Identities=26% Similarity=0.410 Sum_probs=30.2
Q ss_pred ccEEEECCCCchhHHHHhhhc--cCeEEEEccCCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ--NATVLLLEKGGSP 75 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~--g~~VlvLE~G~~~ 75 (570)
-.++|||+|..|+-+|..|++ |.+|.++|+++..
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~ 195 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQI 195 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcc
Confidence 469999999999999999987 8999999998643
No 387
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=65.18 E-value=3.6 Score=41.74 Aligned_cols=31 Identities=23% Similarity=0.292 Sum_probs=28.3
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-++|||.|..|..+|.+|.. |.+|++.|+.+
T Consensus 222 tV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 222 QVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 58999999999999999998 99999999653
No 388
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=65.11 E-value=3.7 Score=39.85 Aligned_cols=32 Identities=16% Similarity=0.181 Sum_probs=29.0
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-.+.|||.|..|...|..|++ |.+|.+.++.+
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 359999999999999999999 99999998764
No 389
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=65.05 E-value=4.8 Score=38.57 Aligned_cols=30 Identities=17% Similarity=0.372 Sum_probs=27.6
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
.+.|||+|..|...|..|++ |.+|.+.++.
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 37 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRN 37 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred eEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 48999999999999999999 9999999865
No 390
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=65.00 E-value=4.6 Score=42.73 Aligned_cols=50 Identities=14% Similarity=0.151 Sum_probs=37.1
Q ss_pred hhhhcCCC-CeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCc
Q 008331 212 LLEYADPE-KLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGA 275 (570)
Q Consensus 212 ~l~~~~~~-g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa 275 (570)
+...+.+. |++++.+ +|++|..++++ ++++|... +|+ ++ .++.||+|+|.
T Consensus 200 L~~~~~~~~Gv~i~~~-~V~~i~~~~~g----~~~~v~~~--~G~--~i-----~ad~vI~A~G~ 250 (550)
T 2e4g_A 200 LRRFATEKLGVRHVED-RVEHVQRDANG----NIESVRTA--TGR--VF-----DADLFVDCSGF 250 (550)
T ss_dssp HHHHHHHHSCCEEEEC-CEEEEEECTTS----CEEEEEET--TSC--EE-----ECSEEEECCGG
T ss_pred HHHHHHhcCCcEEEEC-eEeEEEEcCCC----CEEEEEEC--CCC--EE-----ECCEEEECCCC
Confidence 34455555 9999999 99999986553 67777764 564 34 37999999997
No 391
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=64.96 E-value=3.7 Score=39.08 Aligned_cols=31 Identities=19% Similarity=0.395 Sum_probs=28.2
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.++|||+|..|..+|..|++ |.+|.+.+|..
T Consensus 131 ~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 131 SILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 59999999999999999999 99999998763
No 392
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=64.92 E-value=3.4 Score=47.10 Aligned_cols=33 Identities=15% Similarity=0.190 Sum_probs=30.4
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCCCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGSP 75 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~~ 75 (570)
.++|||+|..|+-+|..|++ |.+|.|+|+.+..
T Consensus 286 ~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~ 319 (965)
T 2gag_A 286 RIAVATTNDSAYELVRELAATGGVVAVIDARSSI 319 (965)
T ss_dssp SEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSC
T ss_pred eEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCcc
Confidence 59999999999999999999 9999999998754
No 393
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=64.92 E-value=3.6 Score=39.69 Aligned_cols=31 Identities=19% Similarity=0.099 Sum_probs=28.4
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.+.|||.|..|...|..|++ |.+|.+.++.+
T Consensus 9 ~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 9 HVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 58999999999999999999 99999998764
No 394
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=64.73 E-value=3.7 Score=39.96 Aligned_cols=30 Identities=10% Similarity=0.304 Sum_probs=27.0
Q ss_pred cEEEECCCCchhHHHHhhhc-cC-eEEEEccC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKG 72 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G 72 (570)
-++|+|+|.+|.++|..|++ |. +|.|+.|.
T Consensus 156 ~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 156 KMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred EEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 58999999999999999999 97 89998876
No 395
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=64.64 E-value=3.8 Score=39.22 Aligned_cols=31 Identities=19% Similarity=0.295 Sum_probs=27.2
Q ss_pred cEEEECCCCchhHHHHhhhc-cC-eEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G~ 73 (570)
-++|+|+|.+|..+|..|++ |. +|.|+.|..
T Consensus 129 ~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 129 SVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred EEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 58999999999999999999 97 699987753
No 396
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=64.60 E-value=5.1 Score=38.31 Aligned_cols=30 Identities=20% Similarity=0.314 Sum_probs=27.3
Q ss_pred EEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 44 YIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 44 vIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
+.|||.|..|...|..|++ |.+|.+.++.+
T Consensus 3 i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 3 VGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp EEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred EEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 7899999999999999999 99999998653
No 397
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=64.56 E-value=3 Score=38.61 Aligned_cols=29 Identities=24% Similarity=0.258 Sum_probs=26.7
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEcc
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEK 71 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~ 71 (570)
.+.|||.|..|..+|..|++ |.+|.++.+
T Consensus 8 kI~IIG~G~~G~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 8 RVGIFDDGSSTVNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp EEEEECCSCCCSCHHHHHHHTTCEEEECSS
T ss_pred EEEEEeeCHHHHHHHHHHHHCCCEEEEecC
Confidence 48999999999999999999 999998875
No 398
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=64.36 E-value=4.3 Score=38.47 Aligned_cols=31 Identities=13% Similarity=0.190 Sum_probs=28.3
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-|+|.|+|..|..++.+|.+ |.+|.++.|..
T Consensus 7 ~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 7 TLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp EEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 39999999999999999999 99999998764
No 399
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=64.32 E-value=3.5 Score=41.23 Aligned_cols=32 Identities=13% Similarity=0.213 Sum_probs=28.9
Q ss_pred cEEEECCCCchhHHHHhhhc-c-------CeEEEEccCCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-N-------ATVLLLEKGGS 74 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g-------~~VlvLE~G~~ 74 (570)
-+.|||+|.-|...|..|++ | .+|.+.++...
T Consensus 23 kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 49999999999999999999 9 89999987653
No 400
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=64.20 E-value=3.8 Score=39.76 Aligned_cols=31 Identities=19% Similarity=0.323 Sum_probs=27.5
Q ss_pred cEEEECCCCchhHHHHhhhc-c--CeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-N--ATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g--~~VlvLE~G~ 73 (570)
-+.|||+|..|..+|..|++ | ..|.++++..
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 37899999999999999999 8 6899998753
No 401
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=63.98 E-value=3.9 Score=39.80 Aligned_cols=30 Identities=27% Similarity=0.434 Sum_probs=27.7
Q ss_pred cEEEECCCCchhHHHHhhhc-cC-eEEEEccC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKG 72 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G 72 (570)
-+.|||+|..|..+|..|+. |. .|.++|..
T Consensus 10 kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 10 KVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 49999999999999999999 88 99999875
No 402
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=63.93 E-value=4.2 Score=41.68 Aligned_cols=34 Identities=21% Similarity=0.296 Sum_probs=30.6
Q ss_pred cccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
...+-|||.|.-|+.+|..|++ |.+|++.++...
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4568899999999999999999 999999998753
No 403
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=63.89 E-value=4 Score=38.76 Aligned_cols=30 Identities=23% Similarity=0.305 Sum_probs=27.2
Q ss_pred EEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 44 YIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 44 vIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
+.|||+|..|...|..|++ |.+|.+.++.+
T Consensus 3 i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 3 IGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 7899999999999999999 99999998653
No 404
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=63.77 E-value=4 Score=38.74 Aligned_cols=31 Identities=29% Similarity=0.394 Sum_probs=28.4
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-|+|.|+|..|..++.+|.+ |.+|.++.|..
T Consensus 5 ~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 5 KILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 38999999999999999999 99999998865
No 405
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=63.66 E-value=4.1 Score=38.25 Aligned_cols=30 Identities=20% Similarity=0.475 Sum_probs=27.2
Q ss_pred EEEECCCCchhHHHHhhhc-c-CeEEEEccCC
Q 008331 44 YIIVGGGTSGCPLAATLSQ-N-ATVLLLEKGG 73 (570)
Q Consensus 44 vIIVGsG~aG~~~A~~La~-g-~~VlvLE~G~ 73 (570)
+.|||+|..|...|..|++ | .+|.+.++.+
T Consensus 3 i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 3 VYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 7899999999999999999 9 9999998653
No 406
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=63.58 E-value=3.9 Score=40.47 Aligned_cols=29 Identities=24% Similarity=0.421 Sum_probs=26.9
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEcc
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEK 71 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~ 71 (570)
-++|+|.|..|..+|..|.+ |.+|++.+.
T Consensus 177 tV~I~G~GnVG~~~A~~l~~~GakVvvsD~ 206 (355)
T 1c1d_A 177 TVLVQGLGAVGGSLASLAAEAGAQLLVADT 206 (355)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEEEeC
Confidence 48999999999999999999 999999874
No 407
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=63.31 E-value=3.2 Score=40.97 Aligned_cols=31 Identities=23% Similarity=0.282 Sum_probs=28.5
Q ss_pred cEEEECCCCchhHHHHhhhc-c-------CeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-N-------ATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g-------~~VlvLE~G~ 73 (570)
-+.|||+|..|...|..|++ | .+|.++++..
T Consensus 10 kI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~ 48 (354)
T 1x0v_A 10 KVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEE 48 (354)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCC
T ss_pred eEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcCh
Confidence 48999999999999999999 9 8999998765
No 408
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=63.31 E-value=4.9 Score=41.04 Aligned_cols=34 Identities=18% Similarity=0.422 Sum_probs=29.3
Q ss_pred cccEEEECCCCchhHHHHhhhc-cC-eEEEEccCCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKGGS 74 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G~~ 74 (570)
..-|+|||+|..|+.+|..|+. |. ++.|++....
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~V 75 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTI 75 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCBC
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCEe
Confidence 4569999999999999999999 84 7999986643
No 409
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=63.09 E-value=3.8 Score=42.59 Aligned_cols=31 Identities=26% Similarity=0.456 Sum_probs=28.3
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-|.|||+|.-|...|..|++ |.+|.+.++..
T Consensus 7 kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 38899999999999999999 99999998764
No 410
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=62.78 E-value=4.1 Score=38.96 Aligned_cols=30 Identities=27% Similarity=0.367 Sum_probs=27.1
Q ss_pred cEEEEC-CCCchhHHHHhhhc-cCeEEEEccC
Q 008331 43 DYIIVG-GGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 43 DvIIVG-sG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
-++|+| +|..|..+|..|++ |.+|.++.|.
T Consensus 121 ~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 121 KAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 489999 89999999999999 9999998765
No 411
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=62.52 E-value=3.7 Score=39.15 Aligned_cols=31 Identities=19% Similarity=0.249 Sum_probs=27.8
Q ss_pred cEEEECCCCchhHHHHhhhc-cC-eEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G~ 73 (570)
-++|+|+|.+|..+|..|++ |. +|.|..|..
T Consensus 119 ~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 119 YILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp CEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred EEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 58999999999999999999 97 899998764
No 412
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=62.49 E-value=4.2 Score=38.19 Aligned_cols=31 Identities=16% Similarity=0.309 Sum_probs=28.0
Q ss_pred cEEEECCCCchhHHHHhhhc-cC-eEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G~ 73 (570)
-++|||+|.+|.+++..|++ |. +|.|..|..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 69999999999999999999 97 899998764
No 413
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=62.40 E-value=4.2 Score=39.46 Aligned_cols=31 Identities=19% Similarity=0.276 Sum_probs=28.2
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.+.|||+|..|...|..|++ |.+|.+.++..
T Consensus 32 ~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 32 KIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred eEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 59999999999999999999 99999998753
No 414
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=62.05 E-value=4.9 Score=36.17 Aligned_cols=30 Identities=17% Similarity=0.316 Sum_probs=27.2
Q ss_pred EEEECC-CCchhHHHHhhhc-cCeEEEEccCC
Q 008331 44 YIIVGG-GTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 44 vIIVGs-G~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
|+|.|+ |..|..++.+|++ |.+|.++.|.+
T Consensus 3 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 3 IGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred EEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 789995 9999999999999 99999998864
No 415
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=61.69 E-value=5.5 Score=39.35 Aligned_cols=34 Identities=18% Similarity=0.209 Sum_probs=29.3
Q ss_pred cccEEEECCCCchhHHHHhhhc-cC-eEEEEccCCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKGGS 74 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G~~ 74 (570)
...|+|||+|..|+.+|..|+. |. ++.|++-...
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V 71 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQV 71 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCc
Confidence 3569999999999999999999 95 7999986653
No 416
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=61.67 E-value=2.5 Score=38.68 Aligned_cols=31 Identities=26% Similarity=0.578 Sum_probs=27.4
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEE-EccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLL-LEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~Vlv-LE~G~ 73 (570)
.+.|||+|..|..+|..|++ |.+|.+ .++..
T Consensus 25 kI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 25 TYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp CEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 59999999999999999999 999888 66653
No 417
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=61.42 E-value=6.5 Score=37.66 Aligned_cols=30 Identities=27% Similarity=0.350 Sum_probs=27.5
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
.+.|||+|..|...|..|++ |.+|.+.++.
T Consensus 6 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 36 (301)
T 3cky_A 6 KIGFIGLGAMGKPMAINLLKEGVTVYAFDLM 36 (301)
T ss_dssp EEEEECCCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 58999999999999999999 9999998865
No 418
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=61.39 E-value=6.9 Score=38.01 Aligned_cols=32 Identities=31% Similarity=0.391 Sum_probs=27.8
Q ss_pred cccEEEECCC-CchhHHHHhhhc-cCeEEEEccC
Q 008331 41 YYDYIIVGGG-TSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 41 ~~DvIIVGsG-~aG~~~A~~La~-g~~VlvLE~G 72 (570)
.-.++|||+| ..|..+|..|.. |.+|.|+++.
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 3479999999 579999999999 9999998765
No 419
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=61.35 E-value=4.8 Score=39.21 Aligned_cols=31 Identities=19% Similarity=0.194 Sum_probs=28.7
Q ss_pred cEEEECCCCchhHHHHhhhc-c-CeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-N-ATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g-~~VlvLE~G~ 73 (570)
.+.|||.|..|...|..|++ | .+|.+.++.+
T Consensus 26 ~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 26 TIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred eEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 48999999999999999999 9 9999998774
No 420
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=61.07 E-value=5.5 Score=39.42 Aligned_cols=31 Identities=26% Similarity=0.363 Sum_probs=27.6
Q ss_pred EEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 44 YIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 44 vIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
++|+|+|.-|..+|+.+.+ |++|++++..+.
T Consensus 4 I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 4 ICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 7999999999999998888 999999986553
No 421
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=61.03 E-value=4.8 Score=39.08 Aligned_cols=30 Identities=27% Similarity=0.379 Sum_probs=26.9
Q ss_pred cEEEECCCCchhHHHHhhhc-cC-eEEEEccC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKG 72 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G 72 (570)
-|.|||+|..|..+|..|+. |. +|.++|..
T Consensus 4 kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~ 35 (309)
T 1ur5_A 4 KISIIGAGFVGSTTAHWLAAKELGDIVLLDIV 35 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Confidence 38999999999999999999 85 89999865
No 422
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=60.97 E-value=6.1 Score=37.48 Aligned_cols=30 Identities=13% Similarity=0.281 Sum_probs=27.1
Q ss_pred cEEEECCCCchhHHHHhhhc-cC-eEEEEccC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKG 72 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G 72 (570)
.++|+|+|.+|..+|..|++ |. +|.|.-|.
T Consensus 121 ~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 121 KVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp CEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred EEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 59999999999999999999 86 79999775
No 423
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=60.90 E-value=4.8 Score=41.00 Aligned_cols=31 Identities=26% Similarity=0.238 Sum_probs=28.1
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-++|||.|..|..+|.+|.. |.+|++.|+.+
T Consensus 249 TVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp 280 (464)
T 3n58_A 249 VAVVCGYGDVGKGSAQSLAGAGARVKVTEVDP 280 (464)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 48999999999999999988 99999998653
No 424
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=60.86 E-value=5.2 Score=38.21 Aligned_cols=31 Identities=10% Similarity=0.255 Sum_probs=27.3
Q ss_pred cEEEECCCCchhHHHHhhhc-cC-eEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G~ 73 (570)
-++|+|+|.+|..+|..|++ |. +|.|..|..
T Consensus 128 ~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 128 TILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp EEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred EEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 58999999999999999999 95 899998753
No 425
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=60.85 E-value=5 Score=38.16 Aligned_cols=32 Identities=9% Similarity=0.168 Sum_probs=27.5
Q ss_pred ccEEEECCCCchhHHHHhhhc-cC-eEEEEccCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKGG 73 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G~ 73 (570)
--++|+|+|.+|..+|..|++ |. +|.|..|..
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 358999999999999999999 95 899987753
No 426
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=60.79 E-value=4.7 Score=42.76 Aligned_cols=33 Identities=30% Similarity=0.517 Sum_probs=30.4
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
-.+||||.|-.|..+|..|.+ |.+|+++|+.+.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~ 382 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQES 382 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChH
Confidence 369999999999999999999 999999998864
No 427
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=60.72 E-value=4.8 Score=38.23 Aligned_cols=29 Identities=24% Similarity=0.336 Sum_probs=26.5
Q ss_pred EEEECCCCchhHHHHhhhc-cC--eEEEEccC
Q 008331 44 YIIVGGGTSGCPLAATLSQ-NA--TVLLLEKG 72 (570)
Q Consensus 44 vIIVGsG~aG~~~A~~La~-g~--~VlvLE~G 72 (570)
+.|||+|..|...|..|++ |. +|.+.++.
T Consensus 4 I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 4 VLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 35 (281)
T ss_dssp EEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred EEEEecCHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 7899999999999999999 87 89998865
No 428
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=60.71 E-value=4.9 Score=40.66 Aligned_cols=30 Identities=23% Similarity=0.306 Sum_probs=27.3
Q ss_pred EEEECCCCchhHHHHhhhccCeEEEEccCC
Q 008331 44 YIIVGGGTSGCPLAATLSQNATVLLLEKGG 73 (570)
Q Consensus 44 vIIVGsG~aG~~~A~~La~g~~VlvLE~G~ 73 (570)
+.|||.|..|+..|..|++|.+|.++++..
T Consensus 3 I~VIG~G~vG~~~A~~La~G~~V~~~d~~~ 32 (402)
T 1dlj_A 3 IAVAGSGYVGLSLGVLLSLQNEVTIVDILP 32 (402)
T ss_dssp EEEECCSHHHHHHHHHHTTTSEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHhCCCEEEEEECCH
Confidence 789999999999999999988999998753
No 429
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=60.71 E-value=4.9 Score=39.05 Aligned_cols=30 Identities=13% Similarity=0.381 Sum_probs=27.0
Q ss_pred cEEEECCCCchhHHHHhhhc-cC-eEEEEccC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKG 72 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G 72 (570)
-++|+|+|.+|.++|..|++ |. +|.|.-|.
T Consensus 150 ~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 150 TMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred EEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 58999999999999999999 97 79998876
No 430
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=60.70 E-value=5.2 Score=38.79 Aligned_cols=30 Identities=23% Similarity=0.426 Sum_probs=26.9
Q ss_pred EEEECCCCchhHHHHhhhc---cCeEEEEccCC
Q 008331 44 YIIVGGGTSGCPLAATLSQ---NATVLLLEKGG 73 (570)
Q Consensus 44 vIIVGsG~aG~~~A~~La~---g~~VlvLE~G~ 73 (570)
+.|||+|..|..+|..|++ +.+|.++++..
T Consensus 3 I~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 3 ITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 7899999999999999997 57899999864
No 431
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=60.50 E-value=4.7 Score=41.84 Aligned_cols=31 Identities=26% Similarity=0.264 Sum_probs=28.1
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-|+|||.|..|..+|..|.. |.+|++.|+.+
T Consensus 276 tV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 276 KVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 49999999999999999998 99999998653
No 432
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=60.44 E-value=7.5 Score=40.87 Aligned_cols=50 Identities=14% Similarity=0.143 Sum_probs=37.1
Q ss_pred hhhhcCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCc
Q 008331 212 LLEYADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGA 275 (570)
Q Consensus 212 ~l~~~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa 275 (570)
+...+.+.|++++.+ +|++|..++++ .+++|.+. +|+ ++ .++.||.|+|.
T Consensus 171 L~~~a~~~gv~~~~~-~v~~i~~~~~g----~~~~v~~~--~g~--~i-----~ad~vV~A~G~ 220 (538)
T 2aqj_A 171 LKRWAVERGVNRVVD-EVVDVRLNNRG----YISNLLTK--EGR--TL-----EADLFIDCSGM 220 (538)
T ss_dssp HHHHHHHTTCEEEEC-CEEEEEECTTS----CEEEEEET--TSC--EE-----CCSEEEECCGG
T ss_pred HHHHHHHCCCEEEEe-eEeEEEEcCCC----cEEEEEEC--CCc--EE-----EeCEEEECCCC
Confidence 344555679999999 89999986653 56677653 564 34 48999999997
No 433
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=60.37 E-value=7.1 Score=42.12 Aligned_cols=60 Identities=17% Similarity=0.092 Sum_probs=40.3
Q ss_pred hhhhcCCCCe--EEEecceEEEEEecCCCCCCCeEEEEEEEe----cCCceEEEEecCCCCceEEEcCCcccc
Q 008331 212 LLEYADPEKL--TVYLRAVVQRIKFTETGRAKPTAHCVTFYD----HVGARHRACLNNGGKNEIILSAGAIGS 278 (570)
Q Consensus 212 ~l~~~~~~g~--~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~----~~G~~~~v~~~~~aa~~VVLaaGa~~t 278 (570)
++..+.+.|+ +|+.+++|++|..++++ +...+.|.+.+ .+|...+++ ++.||.|.|+-.+
T Consensus 147 L~~~a~~~g~~v~v~~~~~v~~l~~~~~~--~~~~v~v~~~~~~~~~~G~~~~i~-----a~~vVgADG~~S~ 212 (639)
T 2dkh_A 147 YLERMRNSPSRLEPHYARRVLDVKVDHGA--ADYPVTVTLERCDAAHAGQIETVQ-----ARYVVGCDGARSN 212 (639)
T ss_dssp HHHHHHHSTTCCCCBCSEEEEEEEECTTC--SSCCEEEEEEECSGGGTTCEEEEE-----EEEEEECCCTTCH
T ss_pred HHHHHHhCCCCcEEecCCEEEEEEECCCC--CcCCEEEEEEeccccCCCCeEEEE-----eCEEEECCCcchH
Confidence 3344555554 99999999999987631 01234566665 367655664 7999999998543
No 434
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=60.34 E-value=4.6 Score=37.91 Aligned_cols=30 Identities=17% Similarity=0.211 Sum_probs=26.4
Q ss_pred EEEECC-C-CchhHHHHhhhc-cCeEEEEccCC
Q 008331 44 YIIVGG-G-TSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 44 vIIVGs-G-~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
++|.|+ | -.|..+|.+|++ |.+|+++.+..
T Consensus 25 vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 25 VLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp EEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 889998 7 589999999999 99999998753
No 435
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=60.08 E-value=5.3 Score=36.11 Aligned_cols=30 Identities=20% Similarity=0.413 Sum_probs=27.3
Q ss_pred EEEECC-CCchhHHHHhhhc-cCeEEEEccCC
Q 008331 44 YIIVGG-GTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 44 vIIVGs-G~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
++|.|+ |..|..++.+|++ |.+|.++.|..
T Consensus 3 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 799998 9999999999999 99999998763
No 436
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=59.99 E-value=5 Score=39.03 Aligned_cols=31 Identities=23% Similarity=0.321 Sum_probs=28.0
Q ss_pred cEEEECCCCchhHHHHhhhc-cC--eEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NA--TVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~--~VlvLE~G~ 73 (570)
-+.|||.|..|...|..|++ |. +|.+.++.+
T Consensus 35 kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 35 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 58999999999999999999 98 899988764
No 437
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=59.98 E-value=5.3 Score=35.45 Aligned_cols=30 Identities=27% Similarity=0.343 Sum_probs=27.5
Q ss_pred EEEECC-CCchhHHHHhhhc-cCeEEEEccCC
Q 008331 44 YIIVGG-GTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 44 vIIVGs-G~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
++|.|+ |..|..++.+|.+ |.+|.++.|..
T Consensus 6 ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 6 IAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred EEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 899998 9999999999999 99999998864
No 438
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=59.98 E-value=5.1 Score=39.19 Aligned_cols=30 Identities=17% Similarity=0.388 Sum_probs=26.8
Q ss_pred cEEEECCCCchhHHHHhhhc-cC--eEEEEccC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NA--TVLLLEKG 72 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~--~VlvLE~G 72 (570)
-+.|||+|..|.++|..|+. |. .|.++|..
T Consensus 7 kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 7 KVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 48999999999999999999 76 89999864
No 439
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=59.91 E-value=5.1 Score=38.87 Aligned_cols=31 Identities=19% Similarity=0.284 Sum_probs=28.3
Q ss_pred ccEEEECCCCchhHHHHhhhc-cC-eEEEEccC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKG 72 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G 72 (570)
-.+.|||.|..|...|..|++ |. +|.+.++.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 359999999999999999999 98 99999875
No 440
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=59.88 E-value=5.2 Score=40.76 Aligned_cols=31 Identities=26% Similarity=0.292 Sum_probs=28.4
Q ss_pred cEEEECCCCchhHHHHhhhccCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQNATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~g~~VlvLE~G~ 73 (570)
.+.|||.|..|+..|..|++|.+|+++++.+
T Consensus 38 kIaVIGlG~mG~~lA~~La~G~~V~~~D~~~ 68 (432)
T 3pid_A 38 KITISGTGYVGLSNGVLIAQNHEVVALDIVQ 68 (432)
T ss_dssp EEEEECCSHHHHHHHHHHHTTSEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHcCCeEEEEecCH
Confidence 5899999999999999999999999998764
No 441
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=59.82 E-value=4.4 Score=41.36 Aligned_cols=28 Identities=21% Similarity=0.436 Sum_probs=26.2
Q ss_pred cEEEECCCCchhHHHHhhhc-cC---eEEEEc
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NA---TVLLLE 70 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~---~VlvLE 70 (570)
-++|+|+|.+|..+|..|.+ |. +|.|++
T Consensus 188 rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 188 TLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred EEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 59999999999999999999 97 799998
No 442
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=59.75 E-value=5.3 Score=36.61 Aligned_cols=31 Identities=16% Similarity=0.281 Sum_probs=28.1
Q ss_pred cEEEECC-CCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGG-GTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGs-G~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-++|.|+ |..|..+|.+|++ |.+|.++.|..
T Consensus 23 ~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 23 RVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred eEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 4899998 9999999999999 99999998864
No 443
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=59.46 E-value=5.1 Score=38.19 Aligned_cols=30 Identities=17% Similarity=0.354 Sum_probs=27.7
Q ss_pred cEEEECC-CCchhHHHHhhhc-cCeEEEEccC
Q 008331 43 DYIIVGG-GTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 43 DvIIVGs-G~aG~~~A~~La~-g~~VlvLE~G 72 (570)
-+.|||+ |..|..+|..|++ |.+|.+.++.
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSSSEEEEECCS
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 4899999 9999999999999 9999999865
No 444
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=59.26 E-value=14 Score=37.49 Aligned_cols=46 Identities=13% Similarity=0.217 Sum_probs=33.4
Q ss_pred eEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCccccHHH
Q 008331 221 LTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIGSPQL 281 (570)
Q Consensus 221 ~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~tp~L 281 (570)
.+|+++++|++|..+++ . |.+...+|+. + .++.||+|+..-...+|
T Consensus 248 ~~i~~~~~V~~i~~~~~-----~---~~v~~~~g~~--~-----~ad~vi~a~p~~~~~~l 293 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGS-----C---YSLELDNGVT--L-----DADSVIVTAPHKAAAGM 293 (470)
T ss_dssp EEEECSCCEEEEEECSS-----S---EEEEESSSCE--E-----EESEEEECSCHHHHHHH
T ss_pred CEEEeCCceEEEEEcCC-----e---EEEEECCCCE--E-----ECCEEEECCCHHHHHHH
Confidence 79999999999998765 3 3344457754 3 36899999987544444
No 445
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=59.13 E-value=4.7 Score=41.55 Aligned_cols=30 Identities=30% Similarity=0.340 Sum_probs=27.7
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
-|+|||+|..|...|..|.+ |.+|.|++..
T Consensus 14 ~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 14 DCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 48999999999999999999 9999999864
No 446
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=58.92 E-value=4.7 Score=40.72 Aligned_cols=28 Identities=21% Similarity=0.395 Sum_probs=25.5
Q ss_pred cEEEECCCCchhHHHHhhhc--cCeEEEEc
Q 008331 43 DYIIVGGGTSGCPLAATLSQ--NATVLLLE 70 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~--g~~VlvLE 70 (570)
.+.|||+|..|...|..|++ |.+|.+++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 48899999999999999976 88999998
No 447
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=58.72 E-value=5.3 Score=37.60 Aligned_cols=31 Identities=19% Similarity=0.378 Sum_probs=28.1
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.+.|||+|..|..+|..|.+ |.+|.+.++..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999 88999998753
No 448
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=58.45 E-value=7.6 Score=40.15 Aligned_cols=32 Identities=22% Similarity=0.318 Sum_probs=28.9
Q ss_pred cEEEECCCCchhHHHHhhhc--cC-eEEEEccCCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ--NA-TVLLLEKGGS 74 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~--g~-~VlvLE~G~~ 74 (570)
.+.|||+|..|+.+|..|++ |. +|+++++...
T Consensus 20 kIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 20 KIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp EEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred EEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 48999999999999999997 78 9999998754
No 449
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=58.43 E-value=5.5 Score=40.41 Aligned_cols=30 Identities=30% Similarity=0.304 Sum_probs=27.9
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
-++|||.|..|..+|.+|.. |.+|++.|+.
T Consensus 213 tVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~ 243 (436)
T 3h9u_A 213 TACVCGYGDVGKGCAAALRGFGARVVVTEVD 243 (436)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEEeeCHHHHHHHHHHHHCCCEEEEECCC
Confidence 49999999999999999999 9999999864
No 450
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=58.31 E-value=7.5 Score=39.92 Aligned_cols=30 Identities=17% Similarity=0.288 Sum_probs=27.3
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
-++|+|+|..|..+|..|++ |.+|.++.|.
T Consensus 5 ~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~ 35 (450)
T 1ff9_A 5 SVLMLGSGFVTRPTLDVLTDSGIKVTVACRT 35 (450)
T ss_dssp EEEEECCSTTHHHHHHHHHTTTCEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHhCcCEEEEEECC
Confidence 38999999999999999999 9999998875
No 451
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=58.18 E-value=5.8 Score=38.14 Aligned_cols=30 Identities=23% Similarity=0.214 Sum_probs=26.9
Q ss_pred EEEECCCCchhHHHHhhhc-cC--eEEEEccCC
Q 008331 44 YIIVGGGTSGCPLAATLSQ-NA--TVLLLEKGG 73 (570)
Q Consensus 44 vIIVGsG~aG~~~A~~La~-g~--~VlvLE~G~ 73 (570)
+.|||+|..|.++|..|+. |. .|.++++-.
T Consensus 3 I~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 3 LGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 7899999999999999999 86 899998753
No 452
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=57.87 E-value=7.5 Score=37.95 Aligned_cols=31 Identities=23% Similarity=0.066 Sum_probs=27.1
Q ss_pred cEEEECCCCchhH-HHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCP-LAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~-~A~~La~-g~~VlvLE~G~ 73 (570)
-+.|||.|.+|+. +|..|.+ |++|.+.|+..
T Consensus 6 ~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 6 HIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp EEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4899999999996 7778888 99999999875
No 453
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=57.81 E-value=6.4 Score=35.54 Aligned_cols=30 Identities=27% Similarity=0.320 Sum_probs=27.3
Q ss_pred EEEEC-CCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 44 YIIVG-GGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 44 vIIVG-sG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
++|.| +|..|..++.+|++ |.+|.++.|..
T Consensus 3 ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 3 IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp EEEESTTSHHHHHHHHHHTTSSCEEEEEESSG
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence 78999 69999999999999 99999998875
No 454
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=56.93 E-value=6.2 Score=38.55 Aligned_cols=31 Identities=23% Similarity=0.366 Sum_probs=27.9
Q ss_pred cEEEECCCCchhHHHHhhhc-cC-eEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G~ 73 (570)
-+.|||+|..|.++|..|+. |. .|.+++...
T Consensus 9 kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 9 KIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 48999999999999999999 87 999999754
No 455
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=56.72 E-value=6 Score=39.97 Aligned_cols=30 Identities=27% Similarity=0.502 Sum_probs=27.3
Q ss_pred cEEEECCCCchhHHHHhhhc-cC-eEEEEccC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKG 72 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G 72 (570)
-++|||+|..|..+|..|.. |. +|++.++.
T Consensus 169 ~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~ 200 (404)
T 1gpj_A 169 TVLVVGAGEMGKTVAKSLVDRGVRAVLVANRT 200 (404)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCSEEEEECSS
T ss_pred EEEEEChHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 59999999999999999998 97 89999865
No 456
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=56.64 E-value=6.3 Score=38.57 Aligned_cols=31 Identities=19% Similarity=0.204 Sum_probs=27.4
Q ss_pred ccEEEECCCCchhHHHHhhhc-cC--eEEEEccC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NA--TVLLLEKG 72 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~--~VlvLE~G 72 (570)
--+.|||+|..|..+|..|+. |+ .|.++|..
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 359999999999999999999 86 89999864
No 457
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=56.58 E-value=6 Score=38.25 Aligned_cols=32 Identities=22% Similarity=0.413 Sum_probs=28.7
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-.+.|||.|..|...|..|++ |.+|.+.++.+
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 359999999999999999999 99999998664
No 458
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=56.53 E-value=5.8 Score=43.48 Aligned_cols=31 Identities=35% Similarity=0.498 Sum_probs=28.6
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-|-|||+|.-|..+|..|++ |++|++.++..
T Consensus 314 kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred EEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 48999999999999999999 99999999764
No 459
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=56.48 E-value=6.4 Score=38.05 Aligned_cols=31 Identities=26% Similarity=0.470 Sum_probs=27.3
Q ss_pred cEEEECCCCchhHHHHhhhc-cC--eEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NA--TVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~--~VlvLE~G~ 73 (570)
-|.|||+|..|...|..|+. |+ .|.++|...
T Consensus 16 kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 16 KITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 59999999999999999998 87 899999764
No 460
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=56.45 E-value=5.6 Score=42.56 Aligned_cols=34 Identities=24% Similarity=0.368 Sum_probs=29.5
Q ss_pred ccEEEECCCCchhHHHHhhhc-cC-eEEEEccCCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKGGSP 75 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G~~~ 75 (570)
.-|+|||+|..|+.+|..|+. |. ++.|++.....
T Consensus 18 s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~Ve 53 (640)
T 1y8q_B 18 GRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTID 53 (640)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCBCC
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCEEC
Confidence 459999999999999999999 84 79999976543
No 461
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=56.29 E-value=6.7 Score=42.76 Aligned_cols=32 Identities=19% Similarity=0.203 Sum_probs=29.5
Q ss_pred cEEEEC--CCCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 43 DYIIVG--GGTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 43 DvIIVG--sG~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
.++||| +|..|+-+|..|++ |.+|.++|+.+.
T Consensus 525 ~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~ 559 (690)
T 3k30_A 525 KVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQ 559 (690)
T ss_dssp EEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred EEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccc
Confidence 599999 89999999999999 999999998864
No 462
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=55.95 E-value=9.2 Score=36.03 Aligned_cols=30 Identities=20% Similarity=0.122 Sum_probs=26.4
Q ss_pred EEEECC---CCchhHHHHhhhc-cCeEEEEccCC
Q 008331 44 YIIVGG---GTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 44 vIIVGs---G~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
++|.|+ |..|..+|.+|++ |.+|+++.|..
T Consensus 9 vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~ 42 (275)
T 2pd4_A 9 GLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE 42 (275)
T ss_dssp EEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST
T ss_pred EEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 789997 5889999999999 99999998764
No 463
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=55.82 E-value=6.6 Score=38.36 Aligned_cols=30 Identities=20% Similarity=0.321 Sum_probs=26.7
Q ss_pred cEEEECCCCchhHHHHhhhc-cC--eEEEEccC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NA--TVLLLEKG 72 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~--~VlvLE~G 72 (570)
-+.|||+|..|..+|..|+. +. .+.++|..
T Consensus 11 kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 11 KVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 48999999999999999999 76 79999863
No 464
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=55.72 E-value=6.4 Score=36.98 Aligned_cols=30 Identities=20% Similarity=0.360 Sum_probs=27.1
Q ss_pred cEEEECCCCchhHHHHhhhc-cCe-EEEEccC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NAT-VLLLEKG 72 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~-VlvLE~G 72 (570)
-+.|||+|..|...|..|++ |.+ |.+.++.
T Consensus 12 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~ 43 (266)
T 3d1l_A 12 PIVLIGAGNLATNLAKALYRKGFRIVQVYSRT 43 (266)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred eEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 59999999999999999999 988 8888865
No 465
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=55.35 E-value=7.1 Score=40.48 Aligned_cols=33 Identities=21% Similarity=0.232 Sum_probs=29.4
Q ss_pred cccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
+-++.|||.|.-|..+|..|++ |.+|.+.+|.+
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 3469999999999999999999 99999998763
No 466
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=55.32 E-value=6.2 Score=36.93 Aligned_cols=31 Identities=19% Similarity=0.304 Sum_probs=27.4
Q ss_pred cEEEECCCCchhHHHHhhhc-c----CeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-N----ATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g----~~VlvLE~G~ 73 (570)
.+.|||+|..|...|..|++ | .+|.+.++..
T Consensus 6 ~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 6 KLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSK 41 (262)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSC
T ss_pred EEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCc
Confidence 48999999999999999999 8 6899988653
No 467
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=55.32 E-value=6.3 Score=40.86 Aligned_cols=31 Identities=26% Similarity=0.358 Sum_probs=28.1
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.+.|||.|..|...|..|++ |.+|.+.++..
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 58899999999999999999 99999998753
No 468
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=55.20 E-value=7.3 Score=38.20 Aligned_cols=31 Identities=23% Similarity=0.287 Sum_probs=28.2
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-+.|||.|..|..+|.+|+. |.+|++.++..
T Consensus 152 ~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 183 (334)
T 2dbq_A 152 TIGIIGLGRIGQAIAKRAKGFNMRILYYSRTR 183 (334)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEEEccCHHHHHHHHHHHhCCCEEEEECCCc
Confidence 49999999999999999999 99999998653
No 469
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=60.16 E-value=2.5 Score=38.18 Aligned_cols=31 Identities=23% Similarity=0.254 Sum_probs=27.7
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-+.|||+|..|...|..|++ |.+|.+.++..
T Consensus 21 ~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 52 (201)
T 2yjz_A 21 VVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNP 52 (201)
Confidence 48899999999999999999 99999887754
No 470
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=55.04 E-value=7.5 Score=35.83 Aligned_cols=30 Identities=27% Similarity=0.457 Sum_probs=26.5
Q ss_pred EEEECC-CCchhHHHHhhhc-cCeEEEEccCC
Q 008331 44 YIIVGG-GTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 44 vIIVGs-G~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
++|.|+ |..|..+|.+|++ |.+|+++.|..
T Consensus 4 vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~ 35 (255)
T 2dkn_A 4 IAITGSASGIGAALKELLARAGHTVIGIDRGQ 35 (255)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCh
Confidence 788887 8889999999999 99999998764
No 471
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=54.97 E-value=5.7 Score=37.24 Aligned_cols=28 Identities=21% Similarity=0.186 Sum_probs=25.3
Q ss_pred EEEECCCCchhHHHHhhhc-cCeEEEEcc
Q 008331 44 YIIVGGGTSGCPLAATLSQ-NATVLLLEK 71 (570)
Q Consensus 44 vIIVGsG~aG~~~A~~La~-g~~VlvLE~ 71 (570)
+.|||.|..|...|..|++ |.+|.+.++
T Consensus 3 I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 3 VGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred EEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 7799999999999999999 999988654
No 472
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=54.94 E-value=7.6 Score=39.94 Aligned_cols=50 Identities=16% Similarity=0.202 Sum_probs=35.5
Q ss_pred CCeEEEecceEEEEEecCCCCCCCeEEEEEEEe--------------cCCceEEEEecCCCCceEEEcCCccccH
Q 008331 219 EKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYD--------------HVGARHRACLNNGGKNEIILSAGAIGSP 279 (570)
Q Consensus 219 ~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~--------------~~G~~~~v~~~~~aa~~VVLaaGa~~tp 279 (570)
.|+++++++.+++|.-+ + ++.+|++.+ .+|+..++ .++.||+|.|.-.++
T Consensus 265 ~gv~i~~~~~~~~i~~~-~-----~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i-----~~d~vi~a~G~~p~~ 328 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGK-R-----KVERIVLGRNELVSDGSGRVAAKDTGEREEL-----PAQLVVRSVGYRGVP 328 (456)
T ss_dssp EEEEEECSEEEEEEECS-S-----SCCEEEEEEEEEEECSSSSEEEEEEEEEEEE-----ECSEEEECSCEECCC
T ss_pred ceEEEEeCCCCeEEecC-C-----cEeEEEEEEEEecCCCcccccccCCCceEEE-----EcCEEEEccccccCC
Confidence 68999999999998754 2 566676652 13443445 479999999976555
No 473
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=54.91 E-value=6.9 Score=38.84 Aligned_cols=32 Identities=13% Similarity=0.240 Sum_probs=29.1
Q ss_pred ccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-.+.|||.|..|...|..|++ |.+|.+.++.+
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 469999999999999999999 99999998763
No 474
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=54.66 E-value=6.7 Score=38.62 Aligned_cols=31 Identities=26% Similarity=0.302 Sum_probs=28.0
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-+.|||.|..|...|..|.+ |.+|.+.++.+
T Consensus 10 kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 10 PVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred EEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 38999999999999999999 99999998653
No 475
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=54.58 E-value=7.1 Score=38.06 Aligned_cols=31 Identities=26% Similarity=0.350 Sum_probs=27.6
Q ss_pred cEEEECCCCchhHHHHhhhc-cC-eEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NA-TVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~-~VlvLE~G~ 73 (570)
-+.|||+|..|.++|..|+. ++ .|.++|.-.
T Consensus 7 kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 7 KITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 48999999999999999998 77 999998754
No 476
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=54.32 E-value=7.2 Score=40.47 Aligned_cols=31 Identities=16% Similarity=0.225 Sum_probs=28.4
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.+.|||.|..|...|..|++ |.+|.+.++..
T Consensus 4 ~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 4 DIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 58999999999999999999 99999998753
No 477
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=54.10 E-value=7.1 Score=38.02 Aligned_cols=32 Identities=22% Similarity=0.333 Sum_probs=27.9
Q ss_pred ccEEEECCCCchhHHHHhhhc-cC--eEEEEccCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NA--TVLLLEKGG 73 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~--~VlvLE~G~ 73 (570)
.-+.|||+|..|.++|..|+. +. .|.++|...
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 469999999999999999999 76 899999753
No 478
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=53.99 E-value=7.4 Score=35.15 Aligned_cols=30 Identities=27% Similarity=0.321 Sum_probs=26.7
Q ss_pred EEEECC-CCchhHHHHhhh-c-cCeEEEEccCC
Q 008331 44 YIIVGG-GTSGCPLAATLS-Q-NATVLLLEKGG 73 (570)
Q Consensus 44 vIIVGs-G~aG~~~A~~La-~-g~~VlvLE~G~ 73 (570)
++|.|+ |..|..+|.+|+ + |.+|.++.|..
T Consensus 8 vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 899995 999999999999 7 99999998764
No 479
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=53.77 E-value=10 Score=36.33 Aligned_cols=32 Identities=34% Similarity=0.526 Sum_probs=27.4
Q ss_pred cccEEEECC-CCchhHHHHhhhc-cCeEEEEccC
Q 008331 41 YYDYIIVGG-GTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 41 ~~DvIIVGs-G~aG~~~A~~La~-g~~VlvLE~G 72 (570)
...++|||. |..|..+|..|.. |..|.++.+.
T Consensus 165 Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~ 198 (300)
T 4a26_A 165 GKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG 198 (300)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 357999996 4589999999999 9999999863
No 480
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=53.75 E-value=9.2 Score=39.64 Aligned_cols=31 Identities=26% Similarity=0.432 Sum_probs=27.5
Q ss_pred cEEEECCCCchhHHHHhhhc-c--CeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-N--ATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g--~~VlvLE~G~ 73 (570)
.+.|||.|..|+..|..|++ | .+|.++++..
T Consensus 11 kI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 11 KVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 59999999999999999998 5 7999998653
No 481
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=53.66 E-value=6.7 Score=37.41 Aligned_cols=28 Identities=21% Similarity=0.389 Sum_probs=25.9
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEc
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLE 70 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE 70 (570)
-+.|||+|..|...|..|++ |.+|.+.+
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 5 KLGFIGLGIMGSPMAINLARAGHQLHVTT 33 (295)
T ss_dssp EEEECCCSTTHHHHHHHHHHTTCEEEECC
T ss_pred EEEEEccCHHHHHHHHHHHhCCCEEEEEc
Confidence 48899999999999999999 99999886
No 482
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=53.49 E-value=8.3 Score=40.13 Aligned_cols=33 Identities=18% Similarity=0.182 Sum_probs=29.8
Q ss_pred cccEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
...+-|||.|.-|..+|..|++ |.+|.+.++.+
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4579999999999999999999 99999998764
No 483
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=53.45 E-value=7.4 Score=40.08 Aligned_cols=31 Identities=42% Similarity=0.622 Sum_probs=28.2
Q ss_pred cEEEECCCCchhHHHHhhhccCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQNATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~g~~VlvLE~G~ 73 (570)
.++|+|+|-.|..+|..|.++.+|-++|+..
T Consensus 237 ~v~I~GgG~ig~~lA~~L~~~~~v~iIE~d~ 267 (461)
T 4g65_A 237 RIMIVGGGNIGASLAKRLEQTYSVKLIERNL 267 (461)
T ss_dssp EEEEECCSHHHHHHHHHHTTTSEEEEEESCH
T ss_pred EEEEEcchHHHHHHHHHhhhcCceEEEecCH
Confidence 6999999999999999996688999999874
No 484
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=53.42 E-value=5.7 Score=41.72 Aligned_cols=30 Identities=23% Similarity=0.467 Sum_probs=26.1
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
-++|+|+|.+|..+|..|++ |.+|.++.|.
T Consensus 366 ~vlV~GaGGig~aia~~L~~~G~~V~i~~R~ 396 (523)
T 2o7s_A 366 TVVVIGAGGAGKALAYGAKEKGAKVVIANRT 396 (523)
T ss_dssp CEEEECCSHHHHHHHHHHHHHCC-CEEEESS
T ss_pred EEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 58999999888999999999 9999998775
No 485
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=53.10 E-value=11 Score=36.87 Aligned_cols=32 Identities=19% Similarity=0.243 Sum_probs=27.5
Q ss_pred cccEEEECCCCchhHHHHhhhc-cC--eEEEEccC
Q 008331 41 YYDYIIVGGGTSGCPLAATLSQ-NA--TVLLLEKG 72 (570)
Q Consensus 41 ~~DvIIVGsG~aG~~~A~~La~-g~--~VlvLE~G 72 (570)
..-+.|||+|..|..+|..|+. |. .+.++|..
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 3459999999999999999998 76 79999864
No 486
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=52.87 E-value=9.7 Score=39.10 Aligned_cols=46 Identities=15% Similarity=0.107 Sum_probs=33.6
Q ss_pred eEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCccccHHHH
Q 008331 221 LTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGAIGSPQLL 282 (570)
Q Consensus 221 ~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa~~tp~LL 282 (570)
.+|+++++|++|..+++ . +.+...+| . + .++.||+|+++....+||
T Consensus 249 ~~i~~~~~V~~i~~~~~-----~---~~v~~~~g-~--~-----~ad~vV~a~p~~~~~~ll 294 (475)
T 3lov_A 249 SEIRLETPLLAISREDG-----R---YRLKTDHG-P--E-----YADYVLLTIPHPQVVQLL 294 (475)
T ss_dssp CEEESSCCCCEEEEETT-----E---EEEECTTC-C--E-----EESEEEECSCHHHHHHHC
T ss_pred CEEEcCCeeeEEEEeCC-----E---EEEEECCC-e--E-----ECCEEEECCCHHHHHHHc
Confidence 79999999999998765 3 44444567 2 3 369999999975545543
No 487
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=52.79 E-value=7.2 Score=39.63 Aligned_cols=33 Identities=18% Similarity=0.444 Sum_probs=28.5
Q ss_pred ccEEEECCCCchhHHHHhhhc-cC---eEEEEccCCC
Q 008331 42 YDYIIVGGGTSGCPLAATLSQ-NA---TVLLLEKGGS 74 (570)
Q Consensus 42 ~DvIIVGsG~aG~~~A~~La~-g~---~VlvLE~G~~ 74 (570)
.-+||.|+|.||+.+|..|.+ |. +|.++++-+.
T Consensus 220 ~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~Gl 256 (487)
T 3nv9_A 220 CRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGS 256 (487)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTEE
T ss_pred cEEEEECCCHHHHHHHHHHHHcCCCcccEEEEecccc
Confidence 458999999999999999988 87 7999997653
No 488
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=52.62 E-value=8 Score=37.54 Aligned_cols=30 Identities=17% Similarity=0.496 Sum_probs=26.8
Q ss_pred EEEECCCCchhHHHHhhhc-cC--eEEEEccCC
Q 008331 44 YIIVGGGTSGCPLAATLSQ-NA--TVLLLEKGG 73 (570)
Q Consensus 44 vIIVGsG~aG~~~A~~La~-g~--~VlvLE~G~ 73 (570)
+.|||+|..|..+|..|+. +. .|.++|...
T Consensus 3 v~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 3 VTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 7899999999999999999 76 899998754
No 489
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=52.61 E-value=8 Score=37.97 Aligned_cols=30 Identities=23% Similarity=0.324 Sum_probs=27.1
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G 72 (570)
-+.|||.|..|...|..|++ |.+|.+.++.
T Consensus 18 ~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~ 48 (338)
T 1np3_A 18 KVAIIGYGSQGHAHACNLKDSGVDVTVGLRS 48 (338)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECCT
T ss_pred EEEEECchHHHHHHHHHHHHCcCEEEEEECC
Confidence 48999999999999999999 9999988765
No 490
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=52.57 E-value=11 Score=35.55 Aligned_cols=30 Identities=23% Similarity=0.406 Sum_probs=26.2
Q ss_pred EEEECCCCchhHHHHhhhccCeEEEEccCC
Q 008331 44 YIIVGGGTSGCPLAATLSQNATVLLLEKGG 73 (570)
Q Consensus 44 vIIVGsG~aG~~~A~~La~g~~VlvLE~G~ 73 (570)
+.|||+|..|...|..|++|.+|.+.++.+
T Consensus 4 i~iiG~G~~G~~~a~~l~~g~~V~~~~~~~ 33 (289)
T 2cvz_A 4 VAFIGLGAMGYPMAGHLARRFPTLVWNRTF 33 (289)
T ss_dssp EEEECCSTTHHHHHHHHHTTSCEEEECSST
T ss_pred EEEEcccHHHHHHHHHHhCCCeEEEEeCCH
Confidence 789999999999999987788899988653
No 491
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=52.56 E-value=12 Score=37.60 Aligned_cols=44 Identities=18% Similarity=0.207 Sum_probs=31.7
Q ss_pred cCCCCeEEEecceEEEEEecCCCCCCCeEEEEEEEecCCceEEEEecCCCCceEEEcCCc
Q 008331 216 ADPEKLTVYLRAVVQRIKFTETGRAKPTAHCVTFYDHVGARHRACLNNGGKNEIILSAGA 275 (570)
Q Consensus 216 ~~~~g~~i~~~~~V~~i~~~~~~~~~~~v~GV~~~~~~G~~~~v~~~~~aa~~VVLaaGa 275 (570)
+++.+ +|+++++|++|..+++ .++ |. ..+|+. + .++.||+|+|.
T Consensus 214 ~~~~g-~i~~~~~V~~i~~~~~-----~v~-v~--~~~g~~--~-----~ad~vi~a~~~ 257 (431)
T 3k7m_X 214 SQEIP-EIRLQTVVTGIDQSGD-----VVN-VT--VKDGHA--F-----QAHSVIVATPM 257 (431)
T ss_dssp HTTCS-CEESSCCEEEEECSSS-----SEE-EE--ETTSCC--E-----EEEEEEECSCG
T ss_pred HhhCC-ceEeCCEEEEEEEcCC-----eEE-EE--ECCCCE--E-----EeCEEEEecCc
Confidence 45567 9999999999988765 332 43 346753 3 36999999985
No 492
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=52.56 E-value=9.8 Score=36.41 Aligned_cols=29 Identities=21% Similarity=0.204 Sum_probs=25.4
Q ss_pred EEEECCC---CchhHHHHhhhc-cCeEEEEccC
Q 008331 44 YIIVGGG---TSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 44 vIIVGsG---~aG~~~A~~La~-g~~VlvLE~G 72 (570)
+||.|++ ..|..+|.+|++ |.+|+++.+.
T Consensus 33 vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~ 65 (296)
T 3k31_A 33 GVIIGVANDKSLAWGIAKAVCAQGAEVALTYLS 65 (296)
T ss_dssp EEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCC
Confidence 7888985 678899999999 9999999865
No 493
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=52.43 E-value=8.8 Score=36.03 Aligned_cols=29 Identities=14% Similarity=0.179 Sum_probs=25.5
Q ss_pred EEEECC---CCchhHHHHhhhc-cCeEEEEccC
Q 008331 44 YIIVGG---GTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 44 vIIVGs---G~aG~~~A~~La~-g~~VlvLE~G 72 (570)
++|.|+ |..|..+|.+|++ |.+|+++.+.
T Consensus 10 vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~ 42 (269)
T 2h7i_A 10 ILVSGIITDSSIAFHIARVAQEQGAQLVLTGFD 42 (269)
T ss_dssp EEECCCSSTTSHHHHHHHHHHHTTCEEEEEECS
T ss_pred EEEECCCCCCchHHHHHHHHHHCCCEEEEEecC
Confidence 788894 7788999999999 9999999865
No 494
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=52.34 E-value=9.8 Score=35.53 Aligned_cols=30 Identities=27% Similarity=0.356 Sum_probs=26.1
Q ss_pred EEEECC---CCchhHHHHhhhc-cCeEEEEccCC
Q 008331 44 YIIVGG---GTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 44 vIIVGs---G~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
++|.|+ |..|..+|.+|++ |.+|+++.+..
T Consensus 11 vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 44 (261)
T 2wyu_A 11 ALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE 44 (261)
T ss_dssp EEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCG
T ss_pred EEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCH
Confidence 889997 5789999999999 99999997653
No 495
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=52.19 E-value=5.7 Score=38.88 Aligned_cols=30 Identities=20% Similarity=0.193 Sum_probs=27.7
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
.++|+|.|-.|..+|..|.+ |. |+++|+.+
T Consensus 117 ~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~ 147 (336)
T 1lnq_A 117 HVVICGWSESTLECLRELRGSEV-FVLAEDEN 147 (336)
T ss_dssp EEEEESCCHHHHHHHTTGGGSCE-EEEESCGG
T ss_pred CEEEECCcHHHHHHHHHHHhCCc-EEEEeCCh
Confidence 59999999999999999999 99 99999765
No 496
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=52.11 E-value=9.7 Score=37.29 Aligned_cols=31 Identities=19% Similarity=0.237 Sum_probs=28.1
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-+.|||.|..|..+|..|+. |.+|++.++..
T Consensus 148 ~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~ 179 (333)
T 2d0i_A 148 KVGILGMGAIGKAIARRLIPFGVKLYYWSRHR 179 (333)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred EEEEEccCHHHHHHHHHHHHCCCEEEEECCCc
Confidence 48999999999999999999 99999988653
No 497
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=52.06 E-value=11 Score=35.75 Aligned_cols=32 Identities=28% Similarity=0.354 Sum_probs=27.3
Q ss_pred cccEEEECC-CCchhHHHHhhhc-cCeEEEEccC
Q 008331 41 YYDYIIVGG-GTSGCPLAATLSQ-NATVLLLEKG 72 (570)
Q Consensus 41 ~~DvIIVGs-G~aG~~~A~~La~-g~~VlvLE~G 72 (570)
.-.++|||. |..|..+|..|.. |..|.++.+.
T Consensus 161 Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~ 194 (286)
T 4a5o_A 161 GMDAVVVGASNIVGRPMALELLLGGCTVTVTHRF 194 (286)
T ss_dssp TCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence 347999995 5699999999999 9999999753
No 498
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=51.97 E-value=8.5 Score=37.64 Aligned_cols=31 Identities=23% Similarity=0.243 Sum_probs=28.1
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-+.|||.|..|..+|..|+. |.+|++.++..
T Consensus 157 ~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 188 (330)
T 2gcg_A 157 TVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQ 188 (330)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEEEESSS
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 49999999999999999999 99999998653
No 499
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=51.87 E-value=8.3 Score=36.96 Aligned_cols=32 Identities=31% Similarity=0.411 Sum_probs=28.9
Q ss_pred cEEEECC-CCchhHHHHhhhc-cCeEEEEccCCC
Q 008331 43 DYIIVGG-GTSGCPLAATLSQ-NATVLLLEKGGS 74 (570)
Q Consensus 43 DvIIVGs-G~aG~~~A~~La~-g~~VlvLE~G~~ 74 (570)
-|+|.|+ |..|..++.+|.+ |.+|.++.|...
T Consensus 9 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 9 RILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred eEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 3899998 9999999999999 999999988754
No 500
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=51.74 E-value=8.2 Score=42.31 Aligned_cols=31 Identities=23% Similarity=0.347 Sum_probs=28.5
Q ss_pred cEEEECCCCchhHHHHhhhc-cCeEEEEccCC
Q 008331 43 DYIIVGGGTSGCPLAATLSQ-NATVLLLEKGG 73 (570)
Q Consensus 43 DvIIVGsG~aG~~~A~~La~-g~~VlvLE~G~ 73 (570)
-|-|||+|..|.-.|..++. |++|+++|..+
T Consensus 318 ~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 318 SVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred EEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 58999999999999999999 99999999654
Done!