BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008332
(570 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3ALG|A Chain A, Crystal Structure Of Class V Chitinase (E115q Mutant) From
Nicotiana Tobaccum In Complex With Nag4
Length = 353
Score = 229 bits (583), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 138/351 (39%), Positives = 203/351 (57%), Gaps = 17/351 (4%)
Query: 27 IRVGYLNLSEVSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKK 86
++ GY ++ I+ LFTHL C+ AD+N QL +S P +++ +F TV++K
Sbjct: 4 VKGGYWFKDSGLALNNIDSTLFTHLFCAFADLNPQLNQLIIS-PENQDSFRQFTSTVQRK 62
Query: 87 NPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTS 146
NPS+ T LSI G+ N + Y M R + RKSFIDSSIR+AR GF GLD W P ++
Sbjct: 63 NPSVKTFLSIAGGR-ANSTAYGIMARQPNSRKSFIDSSIRLARQLGFHGLDLDWQYPLSA 121
Query: 147 TDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPAN--SYLLNSIQRNLNW 204
DM N+G L +EWR A +A+NS R + L+LTA SP N +Y + S+ RNL+W
Sbjct: 122 ADMTNLGTLLNEWR-TAINTEARNSGR--AALLLTAAVSNSPRVNGLNYPVESLARNLDW 178
Query: 205 IHAVTASYYEP-VSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFY 263
I+ + +Y P S + T A L+ ++ S + AWI+ G+ KLV+ +PFY
Sbjct: 179 INLMAYDFYGPNWSPSQTNSHAQLFDPVN---HVSGSDGINAWIQAGVPTKKLVLGIPFY 235
Query: 264 GYAWTLVKPEDNGIGAAAAGPA---LYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNY 320
GYAW LV +G+ A AAG + D G +TY +I+++I +YN+T +Y
Sbjct: 236 GYAWRLVNANIHGLRAPAAGKSNVGAVDDGSMTYNRIRDYIVE--SRATTVYNATIVGDY 293
Query: 321 FSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWLLSQAAAQ 371
+G+ W +DD + VR K+ Y K + LLGY+AW V+ D +W LS+ A+Q
Sbjct: 294 CYSGSNWISYDDTQTVRNKVNYVKGRGLLGYFAWHVA-GDQNWGLSRTASQ 343
>pdb|3ALF|A Chain A, Crystal Structure Of Class V Chitinase From Nicotiana
Tobaccum
Length = 353
Score = 229 bits (583), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 138/351 (39%), Positives = 203/351 (57%), Gaps = 17/351 (4%)
Query: 27 IRVGYLNLSEVSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKK 86
++ GY ++ I+ LFTHL C+ AD+N QL +S P +++ +F TV++K
Sbjct: 4 VKGGYWFKDSGLALNNIDSTLFTHLFCAFADLNPQLNQLIIS-PENQDSFRQFTSTVQRK 62
Query: 87 NPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTS 146
NPS+ T LSI G+ N + Y M R + RKSFIDSSIR+AR GF GLD W P ++
Sbjct: 63 NPSVKTFLSIAGGR-ANSTAYGIMARQPNSRKSFIDSSIRLARQLGFHGLDLDWEYPLSA 121
Query: 147 TDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPAN--SYLLNSIQRNLNW 204
DM N+G L +EWR A +A+NS R + L+LTA SP N +Y + S+ RNL+W
Sbjct: 122 ADMTNLGTLLNEWR-TAINTEARNSGR--AALLLTAAVSNSPRVNGLNYPVESLARNLDW 178
Query: 205 IHAVTASYYEP-VSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFY 263
I+ + +Y P S + T A L+ ++ S + AWI+ G+ KLV+ +PFY
Sbjct: 179 INLMAYDFYGPNWSPSQTNSHAQLFDPVN---HVSGSDGINAWIQAGVPTKKLVLGIPFY 235
Query: 264 GYAWTLVKPEDNGIGAAAAGPA---LYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNY 320
GYAW LV +G+ A AAG + D G +TY +I+++I +YN+T +Y
Sbjct: 236 GYAWRLVNANIHGLRAPAAGKSNVGAVDDGSMTYNRIRDYIVE--SRATTVYNATIVGDY 293
Query: 321 FSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWLLSQAAAQ 371
+G+ W +DD + VR K+ Y K + LLGY+AW V+ D +W LS+ A+Q
Sbjct: 294 CYSGSNWISYDDTQTVRNKVNYVKGRGLLGYFAWHVA-GDQNWGLSRTASQ 343
>pdb|3AQU|A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis
Thaliana
pdb|3AQU|B Chain B, Crystal Structure Of A Class V Chitinase From Arabidopsis
Thaliana
pdb|3AQU|C Chain C, Crystal Structure Of A Class V Chitinase From Arabidopsis
Thaliana
pdb|3AQU|D Chain D, Crystal Structure Of A Class V Chitinase From Arabidopsis
Thaliana
Length = 356
Score = 228 bits (582), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 132/343 (38%), Positives = 202/343 (58%), Gaps = 12/343 (3%)
Query: 40 ISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQG 99
++ I+ LFTHL C+ AD+NS T Q+++S +++ + + F TV+++NPS+ T+LSIG G
Sbjct: 18 VTDIDSSLFTHLFCAFADLNSQTNQVTVS-SANQPKFSTFTQTVQRRNPSVKTLLSIGGG 76
Query: 100 KDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEW 159
+ + Y+SM N + RKSFIDSSIR+AR YGF GLD W P+++T+M N G L EW
Sbjct: 77 I-ADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYPSSATEMTNFGTLLREW 135
Query: 160 RIAATKLDAKNSTRQQSLLILTARFRYSPPANS--YLLNSIQRNLNWIHAVTASYYEPVS 217
R A A+ S+ + L+L A YS S Y ++++ +L+W++ + +Y P
Sbjct: 136 RSAVV---AEASSSGKPRLLLAAAVFYSNNYYSVLYPVSAVASSLDWVNLMAYDFYGPGW 192
Query: 218 TNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI 277
+ T PPAAL+ + S D ++WI+ GL A K V+ P+YGYAW L +
Sbjct: 193 SRVTGPPAALFDPSNA--GPSGDAGTRSWIQAGLPAKKAVLGFPYYGYAWRLTNANSHSY 250
Query: 278 GAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVR 337
A G A+ G + Y +I+ I G +YNST +Y GT W G+DD +++
Sbjct: 251 YAPTTGAAISPDGSIGYGQIRKFIVDNG--ATTVYNSTVVGDYCYAGTNWIGYDDNQSIV 308
Query: 338 AKIAYAKEKRLLGYYAWQVSFDDHDWLLSQAAAQKDSITSASV 380
K+ YAK++ LLGY++W V DD+ LS+AA+Q T+A+
Sbjct: 309 TKVRYAKQRGLLGYFSWHVGADDNS-GLSRAASQAWDATTATT 350
>pdb|1GUV|A Chain A, Structure Of Human Chitotriosidase
Length = 366
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 161/334 (48%), Gaps = 31/334 (9%)
Query: 43 INYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDT 102
++ L THLI + A + T +QLS + +DE +F + +KK NP + T+L+IG G +
Sbjct: 25 LDPSLCTHLIYAFAGM--TNHQLSTTEWNDETLYQEF-NGLKKMNPKLKTLLAIG-GWNF 80
Query: 103 NYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIA 162
++ MV +++R++F++S+IR R Y F GLD W P + D+ R
Sbjct: 81 GTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSP-----AVDKERFT 135
Query: 163 ATKLDAKNSTRQQSLLILTARFRYS---PPANSYL-----LNSIQRNLNWIHAVTASY-- 212
D N+ +Q++ R S P +Y+ ++ I +NL++++ + +
Sbjct: 136 TLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHG 195
Query: 213 -YEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVK 271
+E V T +P + + D ++ W+E+G A KL++ +P YG ++TL
Sbjct: 196 SWEKV-TGHNSPLYKRQEESGAAASLNVDAAVQQWLEKGTPASKLILGMPTYGRSFTLAS 254
Query: 272 PEDNGIGAAAA-----GPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTV 326
D +GA A GP + G++ Y ++ + +Q +V Y
Sbjct: 255 SSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQ-----DQKVPYIFRDNQ 309
Query: 327 WFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
W GFDDVE+ + K++Y K+K L G W + DD
Sbjct: 310 WVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDD 343
>pdb|1LG1|A Chain A, Crystal Structure Of Human Chitotriosidase In Complex With
Chitobiose
pdb|1LG2|A Chain A, Crystal Structure Of Human Chitotriosidase In Complex With
Ethylene Glycol
pdb|1LQ0|A Chain A, Crystal Structure Of Human Chitotriosidase At 2.2 Angstrom
Resolution
Length = 365
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 161/334 (48%), Gaps = 31/334 (9%)
Query: 43 INYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDT 102
++ L THLI + A + T +QLS + +DE +F + +KK NP + T+L+IG G +
Sbjct: 25 LDPSLCTHLIYAFAGM--TNHQLSTTEWNDETLYQEF-NGLKKMNPKLKTLLAIG-GWNF 80
Query: 103 NYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIA 162
++ MV +++R++F++S+IR R Y F GLD W P + D+ R
Sbjct: 81 GTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSP-----AVDKERFT 135
Query: 163 ATKLDAKNSTRQQSLLILTARFRYS---PPANSYL-----LNSIQRNLNWIHAVTASY-- 212
D N+ +Q++ R S P +Y+ ++ I +NL++++ + +
Sbjct: 136 TLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHG 195
Query: 213 -YEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVK 271
+E V T +P + + D ++ W+++G A KL++ +P YG ++TL
Sbjct: 196 SWEKV-TGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLAS 254
Query: 272 PEDNGIGAAAAG-----PALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTV 326
D +GA A G P + G++ Y ++ + +Q +V Y
Sbjct: 255 SSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQ-----DQKVPYIFRDNQ 309
Query: 327 WFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
W GFDDVE+ + K++Y K+K L G W + DD
Sbjct: 310 WVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDD 343
>pdb|1HKK|A Chain A, High Resoultion Crystal Structure Of Human Chitinase In
Complex With Allosamidin
Length = 364
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 161/334 (48%), Gaps = 31/334 (9%)
Query: 43 INYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDT 102
++ L THLI + A + T +QLS + +DE +F + +KK NP + T+L+IG G +
Sbjct: 25 LDPSLCTHLIYAFAGM--TNHQLSTTEWNDETLYQEF-NGLKKMNPKLKTLLAIG-GWNF 80
Query: 103 NYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIA 162
++ MV +++R++F++S+IR R Y F GLD W P + D+ R
Sbjct: 81 GTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSP-----AVDKERFT 135
Query: 163 ATKLDAKNSTRQQSLLILTARFRYS---PPANSYL-----LNSIQRNLNWIHAVTASY-- 212
D N+ +Q++ R S P +Y+ ++ I +NL++++ + +
Sbjct: 136 TLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHG 195
Query: 213 -YEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVK 271
+E V T +P + + D ++ W+++G A KL++ +P YG ++TL
Sbjct: 196 SWEKV-TGHNSPLYKRQEQSGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLAS 254
Query: 272 PEDNGIGAAAAG-----PALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTV 326
D +GA A G P + G++ Y ++ + +Q +V Y
Sbjct: 255 SSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQ-----DQKVPYIFRDNQ 309
Query: 327 WFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
W GFDDVE+ + K++Y K+K L G W + DD
Sbjct: 310 WVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDD 343
>pdb|1HKI|A Chain A, Crystal Structure Of Human Chitinase In Complex With
Glucoallosamidin B
pdb|1HKJ|A Chain A, Crystal Structure Of Human Chitinase In Complex With
Methylallosamidin
pdb|1HKM|A Chain A, High Resolution Crystal Structure Of Human Chitinase In
Complex With Demethylallosamidin
Length = 365
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 161/334 (48%), Gaps = 31/334 (9%)
Query: 43 INYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDT 102
++ L THLI + A + T +QLS + +DE +F + +KK NP + T+L+IG G +
Sbjct: 25 LDPSLCTHLIYAFAGM--TNHQLSTTEWNDETLYQEF-NGLKKMNPKLKTLLAIG-GWNF 80
Query: 103 NYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIA 162
++ MV +++R++F++S+IR R Y F GLD W P + D+ R
Sbjct: 81 GTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSP-----AVDKERFT 135
Query: 163 ATKLDAKNSTRQQSLLILTARFRYS---PPANSYL-----LNSIQRNLNWIHAVTASY-- 212
D N+ +Q++ R S P +Y+ ++ I +NL++++ + +
Sbjct: 136 TLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHG 195
Query: 213 -YEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVK 271
+E V T +P + + D ++ W+++G A KL++ +P YG ++TL
Sbjct: 196 SWEKV-TGHNSPLYKRQEQSGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLAS 254
Query: 272 PEDNGIGAAAAG-----PALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTV 326
D +GA A G P + G++ Y ++ + +Q +V Y
Sbjct: 255 SSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQ-----DQKVPYIFRDNQ 309
Query: 327 WFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
W GFDDVE+ + K++Y K+K L G W + DD
Sbjct: 310 WVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDD 343
>pdb|1WAW|A Chain A, Specificity And Affinity Of Natural Product
Cyclopentapeptide Inhibitor Argadin Against Human
Chitinase
pdb|1WB0|A Chain A, Specificity And Affinity Of Natural Product
Cyclopentapeptide Inhibitor Argifin Against Human
Chitinase
Length = 445
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 161/334 (48%), Gaps = 31/334 (9%)
Query: 43 INYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDT 102
++ L THLI + A + T +QLS + +DE +F + +KK NP + T+L+IG G +
Sbjct: 25 LDPSLCTHLIYAFAGM--TNHQLSTTEWNDETLYQEF-NGLKKMNPKLKTLLAIG-GWNF 80
Query: 103 NYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIA 162
++ MV +++R++F++S+IR R Y F GLD W P + D+ R
Sbjct: 81 GTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSP-----AVDKERFT 135
Query: 163 ATKLDAKNSTRQQSLLILTARFRYS---PPANSYL-----LNSIQRNLNWIHAVTASY-- 212
D N+ +Q++ R S P +Y+ ++ I +NL++++ + +
Sbjct: 136 TLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHG 195
Query: 213 -YEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVK 271
+E V T +P + + D ++ W+++G A KL++ +P YG ++TL
Sbjct: 196 SWEKV-TGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLAS 254
Query: 272 PEDNGIGAAAAG-----PALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTV 326
D +GA A G P + G++ Y ++ + +Q +V Y
Sbjct: 255 SSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQDQ-----KVPYIFRDNQ 309
Query: 327 WFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
W GFDDVE+ + K++Y K+K L G W + DD
Sbjct: 310 WVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDD 343
>pdb|4AY1|A Chain A, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|B Chain B, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|C Chain C, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|D Chain D, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|E Chain E, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|F Chain F, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|G Chain G, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|H Chain H, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|I Chain I, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|J Chain J, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|K Chain K, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|L Chain L, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
Length = 365
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 155/330 (46%), Gaps = 18/330 (5%)
Query: 39 TISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQ 98
T I+ L +HLI S A I + + E + + +++K KNP + +LSIG
Sbjct: 22 TPENIDPFLCSHLIYSFASIENNKVIIK---DKSEVMLYQTINSLKTKNPKLKILLSIG- 77
Query: 99 GKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDE 158
G + MV +S+ R FI+S I R + F GLD +W P+ + + +L E
Sbjct: 78 GYLFGSKGFHPMVDSSTSRLEFINSIILFLRNHNFDGLDVSWIYPDQKENT-HFTVLIHE 136
Query: 159 WRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVT----ASYYE 214
A K D ST+++ LL NSY + + ++L++I+ ++ S+ +
Sbjct: 137 LAEAFQK-DFTKSTKERLLLTAGVSAGRQMIDNSYQVEKLAKDLDFINLLSFDFHGSWEK 195
Query: 215 PVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPED 274
P+ T +P + + + + + WI +G+ ++K+VM +P YG+++TL E
Sbjct: 196 PLITGHNSPLSKGWQDRGPSSYYNVEYAVGYWIHKGMPSEKVVMGIPTYGHSFTLASAET 255
Query: 275 N----GIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGF 330
G AAGP SG + Y +I +K G + + + +V Y G W G+
Sbjct: 256 TVGAPASGPGAAGPITESSGFLAYYEICQFLK--GAKITRLQDQ--QVPYAVKGNQWVGY 311
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
DDV+++ K+ + K L G W + DD
Sbjct: 312 DDVKSMETKVQFLKNLNLGGAMIWSIDMDD 341
>pdb|3FXY|A Chain A, Acidic Mammalian Chinase, Catalytic Domain
pdb|3FXY|B Chain B, Acidic Mammalian Chinase, Catalytic Domain
pdb|3FXY|C Chain C, Acidic Mammalian Chinase, Catalytic Domain
pdb|3FXY|D Chain D, Acidic Mammalian Chinase, Catalytic Domain
pdb|3FY1|A Chain A, The Acidic Mammalian Chitinase Catalytic Domain In Complex
With Methylallosamidin
pdb|3FY1|B Chain B, The Acidic Mammalian Chitinase Catalytic Domain In Complex
With Methylallosamidin
pdb|3RM4|A Chain A, Amcase In Complex With Compound 1
pdb|3RM4|B Chain B, Amcase In Complex With Compound 1
pdb|3RM8|A Chain A, Amcase In Complex With Compound 2
pdb|3RM8|B Chain B, Amcase In Complex With Compound 2
pdb|3RM9|A Chain A, Amcase In Complex With Compound 3
pdb|3RM9|B Chain B, Amcase In Complex With Compound 3
pdb|3RME|A Chain A, Amcase In Complex With Compound 5
pdb|3RME|B Chain B, Amcase In Complex With Compound 5
Length = 395
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 155/330 (46%), Gaps = 21/330 (6%)
Query: 43 INYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDT 102
IN L THLI + A + + ++ ++ + + + +K KN + T+L+IG G +
Sbjct: 25 INPCLCTHLIYAFAGMQNNEI---TTIEWNDVTLYQAFNGLKNKNSQLKTLLAIG-GWNF 80
Query: 103 NYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT----STDMFNIGLLFDE 158
+ +++MV +R++FI S I+ R Y F GLDF W P + D +L E
Sbjct: 81 GTAPFTAMVSTPENRQTFITSVIKFLRQYEFDGLDFDWEYPGSRGSPPQDKHLFTVLVQE 140
Query: 159 WRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVST 218
R A + +AK + + ++ S + Y + + + L++IH +T +
Sbjct: 141 MR-EAFEQEAKQINKPRLMVTAAVAAGISNIQSGYEIPQLSQYLDYIHVMTYDLHGSWE- 198
Query: 219 NFTAPPAALY--GSISGRFAR-STDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDN 275
+T + LY + +G A + D V+ W + G A+KL++ P YG+ + L P +
Sbjct: 199 GYTGENSPLYKYPTDTGSNAYLNVDYVMNYWKDNGAPAEKLIVGFPTYGHNFILSNPSNT 258
Query: 276 GI-----GAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGF 330
GI GA AGP +SG+ Y +I +K +++ EV Y G VW G+
Sbjct: 259 GIGAPTSGAGPAGPYAKESGIWAYYEICTFLKN---GATQGWDAPQEVPYAYQGNVWVGY 315
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
D+V++ K + K + G W + DD
Sbjct: 316 DNVKSFDIKAQWLKHNKFGGAMVWAIDLDD 345
>pdb|2YBT|A Chain A, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin C
pdb|2YBT|B Chain B, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin C
pdb|2YBT|C Chain C, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin C
pdb|2YBT|D Chain D, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin C
pdb|2YBT|E Chain E, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin C
pdb|2YBT|F Chain F, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin C
pdb|2YBU|A Chain A, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin F
pdb|2YBU|B Chain B, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin F
pdb|2YBU|C Chain C, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin F
pdb|2YBU|D Chain D, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin F
pdb|2YBU|E Chain E, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin F
pdb|2YBU|F Chain F, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin F
Length = 381
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 155/330 (46%), Gaps = 21/330 (6%)
Query: 43 INYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDT 102
IN L THLI + A + + ++ ++ + + + +K KN + T+L+IG G +
Sbjct: 29 INPCLCTHLIYAFAGMQNNEI---TTIEWNDVTLYQAFNGLKNKNSQLKTLLAIG-GWNF 84
Query: 103 NYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT----STDMFNIGLLFDE 158
+ +++MV +R++FI S I+ R Y F GLDF W P + D +L E
Sbjct: 85 GTAPFTAMVSTPENRQTFITSVIKFLRQYEFDGLDFDWEYPGSRGSPPQDKHLFTVLVQE 144
Query: 159 WRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVST 218
R A + +AK + + ++ S + Y + + + L++IH +T +
Sbjct: 145 MR-EAFEQEAKQINKPRLMVTAAVAAGISNIQSGYEIPQLSQYLDYIHVMTYDLHGSWE- 202
Query: 219 NFTAPPAALY--GSISGRFAR-STDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDN 275
+T + LY + +G A + D V+ W + G A+KL++ P YG+ + L P +
Sbjct: 203 GYTGENSPLYKYPTDTGSNAYLNVDYVMNYWKDNGAPAEKLIVGFPTYGHNFILSNPSNT 262
Query: 276 GI-----GAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGF 330
GI GA AGP +SG+ Y +I +K +++ EV Y G VW G+
Sbjct: 263 GIGAPTSGAGPAGPYAKESGIWAYYEICTFLKN---GATQGWDAPQEVPYAYQGNVWVGY 319
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
D++++ K + K + G W + DD
Sbjct: 320 DNIKSFDIKAQWLKHNKFGGAMVWAIDLDD 349
>pdb|1HJV|A Chain A, Crystal Structure Of Hcgp-39 In Complex With Chitin
Tetramer
pdb|1HJV|B Chain B, Crystal Structure Of Hcgp-39 In Complex With Chitin
Tetramer
pdb|1HJV|C Chain C, Crystal Structure Of Hcgp-39 In Complex With Chitin
Tetramer
pdb|1HJV|D Chain D, Crystal Structure Of Hcgp-39 In Complex With Chitin
Tetramer
pdb|1HJW|A Chain A, Crystal Structure Of Hcgp-39 In Complex With Chitin
Octamer
pdb|1HJW|B Chain B, Crystal Structure Of Hcgp-39 In Complex With Chitin
Octamer
pdb|1HJX|A Chain A, Ligand-Induced Signalling And Conformational Change Of The
39 Kd Glycoprotein From Human Articular Chondrocytes
pdb|1HJX|B Chain B, Ligand-Induced Signalling And Conformational Change Of The
39 Kd Glycoprotein From Human Articular Chondrocytes
pdb|1HJX|C Chain C, Ligand-Induced Signalling And Conformational Change Of The
39 Kd Glycoprotein From Human Articular Chondrocytes
pdb|1HJX|D Chain D, Ligand-Induced Signalling And Conformational Change Of The
39 Kd Glycoprotein From Human Articular Chondrocytes
pdb|1NWR|A Chain A, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39)
pdb|1NWR|B Chain B, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39)
pdb|1NWR|C Chain C, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39)
pdb|1NWR|D Chain D, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39)
pdb|1NWS|A Chain A, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitobiose
pdb|1NWS|B Chain B, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitobiose
pdb|1NWS|C Chain C, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitobiose
pdb|1NWS|D Chain D, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitobiose
pdb|1NWT|A Chain A, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitopentaose
pdb|1NWT|B Chain B, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitopentaose
pdb|1NWT|C Chain C, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitopentaose
pdb|1NWT|D Chain D, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitopentaose
pdb|1NWU|A Chain A, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitotetraose
pdb|1NWU|B Chain B, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitotetraose
pdb|1NWU|C Chain C, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitotetraose
pdb|1NWU|D Chain D, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitotetraose
Length = 362
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 158/323 (48%), Gaps = 23/323 (7%)
Query: 47 LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
L TH+I S A+I++ + ++ + +T+K +NP++ T+LS+G G +
Sbjct: 29 LCTHIIYSFANISNDHID---TWEWNDVTLYGMLNTLKNRNPNLKTLLSVG-GWNFGSQR 84
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
+S + N+ R++FI S R +GF GLD AW P D + L E + K
Sbjct: 85 FSKIASNTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRR-DKQHFTTLIKEMKAEFIK- 142
Query: 167 DAKNSTRQQSLLILTARFRYSPPA--NSYLLNSIQRNLNWIHAVTASYYEP--VSTNFTA 222
+A+ +Q L+L+A +SY + I ++L++I +T ++ +T +
Sbjct: 143 EAQPGKKQ---LLLSAALSAGKVTIDSSYDIAKISQHLDFISIMTYDFHGAWRGTTGHHS 199
Query: 223 PPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA 282
P S +TD + + G A KLVM +P +G ++TL E G+GA +
Sbjct: 200 PLFRGQEDASPDRFSNTDYAVGYMLRLGAPASKLVMGIPTFGRSFTLASSE-TGVGAPIS 258
Query: 283 GPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVR 337
GP + ++G + Y +I + ++ G V + +V Y + G W G+DD E+V+
Sbjct: 259 GPGIPGRFTKEAGTLAYYEICDFLR--GATVHRILGQ--QVPYATKGNQWVGYDDQESVK 314
Query: 338 AKIAYAKEKRLLGYYAWQVSFDD 360
+K+ Y K+++L G W + DD
Sbjct: 315 SKVQYLKDRQLAGAMVWALDLDD 337
>pdb|1E9L|A Chain A, The Crystal Structure Of Novel Mammalian Lectin Ym1
Suggests A Saccharide Binding Site
pdb|1VF8|A Chain A, The Crystal Structure Of Ym1 At 1.31 A Resolution
Length = 377
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 147/328 (44%), Gaps = 25/328 (7%)
Query: 47 LFTHLICSSADI--NSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNY 104
L THLI + A + N TY L E + +K KN + T+L+IG G
Sbjct: 29 LCTHLIYAFAGMQNNEITYTHEQDLRDYEA-----LNGLKDKNTELKTLLAIG-GWKFGP 82
Query: 105 SIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT----STDMFNIGLLFDEWR 160
+ +S+MV +R+ FI S IR R Y F GL+ W P + D +L E R
Sbjct: 83 APFSAMVSTPQNRQIFIQSVIRFLRQYNFDGLNLDWQYPGSRGSPPKDKHLFSVLVKEMR 142
Query: 161 IAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNF 220
A + + + LL T + Y + + ++L++I +T ++P +
Sbjct: 143 KAFEEESVEKDIPRL-LLTSTGAGIIDVIKSGYKIPELSQSLDYIQVMTYDLHDP-KDGY 200
Query: 221 TAPPAALYGS---ISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI 277
T + LY S I + D ++ W + G +++KL++ P YG+ + L P GI
Sbjct: 201 TGENSPLYKSPYDIGKSADLNVDSIISYWKDHGAASEKLIVGFPAYGHTFILSDPSKTGI 260
Query: 278 GA---AAAGPALY--DSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDD 332
GA + P Y +SGL+ Y ++ + +V +++ EV Y G W G+D+
Sbjct: 261 GAPTISTGPPGKYTDESGLLAYYEVCTFLNEGATEV---WDAPQEVPYAYQGNEWVGYDN 317
Query: 333 VEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
V + + K + K+ L G W + DD
Sbjct: 318 VRSFKLKAQWLKDNNLGGAVVWPLDMDD 345
>pdb|1SR0|A Chain A, Crystal Structure Of Signalling Protein From Sheep(Sps-40)
At 3.0a Resolution Using Crystal Grown In The Presence
Of Polysaccharides
pdb|1ZBK|A Chain A, Recognition Of Specific Peptide Sequences By Signalling
Protein From Sheep Mammary Gland (Sps-40): Crystal
Structure Of The Complex Of Sps-40 With A Peptide
Trp-Pro-Trp At 2.9a Resolution
pdb|1ZL1|A Chain A, Crystal Structure Of The Complex Of Signalling Protein
From Sheep (Sps-40) With A Designed Peptide Trp-His-Trp
Reveals Significance Of Asn79 And Trp191 In The Complex
Formation
pdb|2FDM|A Chain A, Crystal Structure Of The Ternary Complex Of Signalling
Glycoprotein Frm Sheep (Sps-40)with Hexasaccharide
(Nag6) And Peptide Trp-Pro-Trp At 3.0a Resolution
pdb|2G41|A Chain A, Crystal Structure Of The Complex Of Sheep Signalling
Glycoprotein With Chitin Trimer At 3.0a Resolution
pdb|2G8Z|A Chain A, Crystal Structure Of The Ternary Complex Of Signalling
Protein From Sheep (Sps-40) With Trimer And Designed
Peptide At 2.5a Resolution
pdb|2DPE|A Chain A, Crystal Structure Of A Secretory 40kda Glycoprotein From
Sheep At 2.0a Resolution
pdb|2DSU|A Chain A, Binding Of Chitin-Like Polysaccharide To Protective
Signalling Factor: Crystal Structure Of The Complex
Formed Between Signalling Protein From Sheep (Sps-40)
With A Tetrasaccharide At 2.2 A Resolution
pdb|2DSV|A Chain A, Interactions Of Protective Signalling Factor With
Chitin-like Polysaccharide: Crystal Structure Of The
Complex Between Signalling Protein From Sheep (sps-40)
And A Hexasaccharide At 2.5a Resolution
pdb|2DSW|A Chain A, Binding Of Chitin-Like Polysaccharides To Protective
Signalling Factor: Crystal Structure Of The Complex Of
Signalling Protein From Sheep (Sps-40) With A
Pentasaccharide At 2.8 A Resolution
Length = 361
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 155/323 (47%), Gaps = 24/323 (7%)
Query: 47 LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
L TH+I S A+I++ + ++ + +T+K +NP + T+LS+G G +
Sbjct: 29 LCTHVIYSFANISNNEID---TWEWNDVTLYDTLNTLKNRNPKLKTLLSVG-GWNFGPER 84
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
+S++ + R++FI S R +GF GLD AW P D ++ L E + +
Sbjct: 85 FSAIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRR-DKRHLTTLVKEMKAEFIR- 142
Query: 167 DAKNSTRQQSLLILTARFRYSPPA--NSYLLNSIQRNLNWIHAVTASYYEP--VSTNFTA 222
+A+ T Q L+L+A A Y + I R+L++I +T ++ + +
Sbjct: 143 EAQAGTEQ---LLLSAAVSAGKIAIDRGYDIAQISRHLDFISLLTYDFHGAWRQTVGHHS 199
Query: 223 PPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA 282
P A S RF+ + D + + G A+KLVM +P +G ++TL + + +GA +
Sbjct: 200 PLFAGNEDASSRFSNA-DYAVSYMLRLGAPANKLVMGIPTFGRSFTLASSKTD-VGAPVS 257
Query: 283 GPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVR 337
GP + + G++ Y +I + + +G + +V Y + G W +DD E+V+
Sbjct: 258 GPGVPGRFTKEKGILAYYEICDFL--HGATTHRFRDQ--QVPYATKGNQWVAYDDQESVK 313
Query: 338 AKIAYAKEKRLLGYYAWQVSFDD 360
K Y K ++L G W + DD
Sbjct: 314 NKARYLKNRQLAGAMVWALDLDD 336
>pdb|1LJY|A Chain A, Crystal Structure Of A Novel Regulatory 40 Kda Mammary
Gland Protein (Mgp-40) Secreted During Involution
Length = 361
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 153/323 (47%), Gaps = 24/323 (7%)
Query: 47 LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
L TH+I S A+I++ + ++ + +T+K +NP + T+LS+G G +
Sbjct: 29 LCTHVIYSFANISNNEID---TWEWNDVTLYDTLNTLKNRNPKLKTLLSVG-GWNFGPER 84
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
+S++ + R++FI S R +GF GLD AW P D ++ L E + A
Sbjct: 85 FSAIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRR-DKRHLTALVKEMK-AEFAR 142
Query: 167 DAKNSTRQQSLLILTARFRYSPPA--NSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPP 224
+A+ T + L+L+A A Y + I R+L++I +T ++
Sbjct: 143 EAQAGTER---LLLSAAVSAGKIAIDRGYDIAQISRHLDFISLLTYDFHGAWRQTVGHHS 199
Query: 225 AALYGSISG--RFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA 282
G+ G RF+ + D + + G A+KLVM +P +G ++TL + +G GA +
Sbjct: 200 PLFRGNSDGSSRFSNA-DYAVSYMLRLGAPANKLVMGIPTFGRSFTLASSKTDG-GAPIS 257
Query: 283 GPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVR 337
GP + + G++ Y +I + + +G + +V Y + G W +DD E+V+
Sbjct: 258 GPGIPGRFTKEKGILAYYEICDFL--HGATTHRFRDQ--QVPYATKGNQWVAYDDQESVK 313
Query: 338 AKIAYAKEKRLLGYYAWQVSFDD 360
K Y K ++L G W + DD
Sbjct: 314 NKARYLKNRQLAGAMVWALDLDD 336
>pdb|1XHG|A Chain A, Crystal Structure Of A 40 Kda Signalling Protein From
Porcine (spp-40) At 2.89a Resolution
pdb|1XRV|A Chain A, Crystal Structure Of The Novel Secretory Signalling
Protein From Porcine (Spp-40) At 2.1a Resolution.
pdb|1ZBC|A Chain A, Crystal Structure Of The Porcine Signalling Protein
Liganded With The Peptide Trp-Pro-Trp (Wpw) At 2.3 A
Resolution
pdb|1ZB5|A Chain A, Recognition Of Peptide Ligands By Signalling Protein From
Porcine Mammary Gland (Spp-40): Crystal Structure Of The
Complex Of Spp-40 With A Peptide Trp-Pro-Trp At 2.45a
Resolution
Length = 361
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 152/323 (47%), Gaps = 24/323 (7%)
Query: 47 LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
L TH+I S A+I++ + ++ + +T+K +NP++ T+LS+G G +
Sbjct: 29 LCTHVIYSFANISNNEID---TWEWNDVTLYDTLNTLKNRNPNLKTLLSVG-GWNFGPQR 84
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
+S + + R++FI S R +GF GLD AW P D ++ L E + +
Sbjct: 85 FSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRR-DKRHLTTLVKEMKAEFIR- 142
Query: 167 DAKNSTRQQSLLILTARFRYSPPA--NSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPP 224
+A+ T Q L+L+A A Y + I R+L++I +T ++
Sbjct: 143 EAQAGTEQ---LLLSAAVSAGKIAIDRGYDIAQISRHLDFISLLTYDFHGAWRQTVGHHS 199
Query: 225 AALYGS--ISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA 282
G S RF+ + D + + G A+KLVM +P +G ++TL + + +GA +
Sbjct: 200 PLFRGQEDASSRFSNA-DYAVSYMLRLGAPANKLVMGIPTFGKSFTLASSKTD-VGAPVS 257
Query: 283 GPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVR 337
GP + + G++ Y +I + ++ G + +V Y + G W +DD E+V+
Sbjct: 258 GPGIPGQFTKEKGILAYYEICDFLQ--GATTHRFRDQ--QVPYATKGNQWVAYDDQESVK 313
Query: 338 AKIAYAKEKRLLGYYAWQVSFDD 360
K Y K ++L G W + DD
Sbjct: 314 NKARYLKNRQLAGAMVWALDLDD 336
>pdb|2PI6|A Chain A, Crystal Structure Of The Sheep Signalling Glycoprotein
(Sps-40) Complex With 2-Methyl-2-4-Pentanediol At 1.65a
Resolution Reveals Specific Binding Characteristics Of
Sps-40
Length = 361
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 137/289 (47%), Gaps = 21/289 (7%)
Query: 81 DTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAW 140
+T+K +NP + T+LS+G G + +S + + R++FI S R +GF GLD AW
Sbjct: 60 NTLKNRNPKLKTLLSVG-GWNFGPERFSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAW 118
Query: 141 TAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPA--NSYLLNSI 198
P D ++ L E + + +A+ T Q L+L+A A Y + I
Sbjct: 119 LYPGRR-DKRHLTTLVKEMKAEFIR-EAQAGTEQ---LLLSAAVSAGKIAIDRGYDIAQI 173
Query: 199 QRNLNWIHAVTASYYEPVSTNFTAPPAALYGS--ISGRFARSTDQVLKAWIERGLSADKL 256
R+L++I +T ++ G+ S RF+ + D + + G A+KL
Sbjct: 174 SRHLDFISLLTYDFHGAWRQTVGHHSPLFRGNEDASSRFSNA-DYAVSYMLRLGAPANKL 232
Query: 257 VMCLPFYGYAWTLVKPEDNGIGAAAAGPAL-----YDSGLVTYKKIKNHIKTYGPDVQVM 311
VM +P +G ++TL + + +GA +GP + + G++ Y +I + + +G
Sbjct: 233 VMGIPTFGRSFTLASSKTD-VGAPVSGPGIPGRFTKEKGILAYYEICDFL--HGATTHRF 289
Query: 312 YNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
+ +V Y + G W +DD E+V+ K Y K ++L G W + DD
Sbjct: 290 RDQ--QVPYATKGNQWVAYDDQESVKNKARYLKNRQLAGAMVWALDLDD 336
>pdb|1SYT|A Chain A, Crystal Structure Of Signalling Protein From Goat Spg-40
In The Presense Of N,n',n''-triacetyl-chitotriose At
2.6a Resolution
Length = 361
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 152/323 (47%), Gaps = 24/323 (7%)
Query: 47 LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
L TH+I S A+I++ + ++ + +T+K +NP + T+LS+G G +
Sbjct: 29 LCTHVIYSFANISNNEID---TWEWNDVTLYDTLNTLKNRNPKLKTLLSVG-GWNFGPER 84
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
+S + + R++FI S R +GF GLD AW P D ++ L E + A
Sbjct: 85 FSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRR-DKRHLTALVKEMK-AEFAR 142
Query: 167 DAKNSTRQQSLLILTARFRYSPPA--NSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPP 224
+A+ T + L+L+A A Y + I R+L++I +T ++
Sbjct: 143 EAQAGTER---LLLSAAVSAGKIAIDRGYDIAQISRHLDFISLLTYDFHGAWRQTVGHHS 199
Query: 225 AALYGS--ISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA 282
G+ S RF+ + D + + G A+KLVM +P +G ++TL + +G GA +
Sbjct: 200 PLFRGNSDASSRFS-NADYAVSYMLRLGAPANKLVMGIPTFGRSFTLASSKTDG-GAPIS 257
Query: 283 GPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVR 337
GP + + G++ Y +I + + +G + +V Y + G W +DD E+V+
Sbjct: 258 GPGIPGRFTKEKGILAYYEICDFL--HGATTHRFRDQ--QVPYATKGNQWVAYDDQESVK 313
Query: 338 AKIAYAKEKRLLGYYAWQVSFDD 360
K Y K ++L G W + DD
Sbjct: 314 NKARYLKNRQLAGAMVWALDLDD 336
>pdb|2ESC|A Chain A, Crystal Structure Of A 40 Kda Protective Signalling
Protein From Bovine (Spc-40) At 2.1 A Resolution
Length = 361
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 151/323 (46%), Gaps = 24/323 (7%)
Query: 47 LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
L TH+I S A+I++ + ++ + +T+K +NP++ T+LS+G G +
Sbjct: 29 LCTHVIYSFANISNNEID---TWEWNDVTLYDTLNTLKNRNPNLKTLLSVG-GWNFGSER 84
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
+S + + R++FI S R +GF GLD AW P D ++ L E + +
Sbjct: 85 FSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGWR-DKRHLTTLVKEMKAEFVR- 142
Query: 167 DAKNSTRQQSLLILTARFRYSPPA--NSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPP 224
+A+ T Q L+L+A A Y + I R+L++I +T ++
Sbjct: 143 EAQAGTEQ---LLLSAAVTAGKIAIDRGYDIAQISRHLDFISLLTYDFHGGWRGTVGHHS 199
Query: 225 AALYGSISG--RFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA 282
G+ G RF+ + D + + G A+KLVM +P +G ++TL +GA +
Sbjct: 200 PLFRGNSDGSSRFSNA-DYAVSYMLRLGAPANKLVMGIPTFGRSYTLASSSTR-VGAPIS 257
Query: 283 GPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVR 337
GP + + G++ Y +I + + +G + +V Y + G W +DD E+V+
Sbjct: 258 GPGIPGQFTKEKGILAYYEICDFL--HGATTHRFRDQ--QVPYATKGNQWVAYDDQESVK 313
Query: 338 AKIAYAKEKRLLGYYAWQVSFDD 360
K Y K ++L G W + DD
Sbjct: 314 NKARYLKNRQLAGAMVWALDLDD 336
>pdb|1OWQ|A Chain A, Crystal Structure Of A 40 Kda Signalling Protein (Spc-40)
Secreted During Involution
Length = 361
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 152/323 (47%), Gaps = 24/323 (7%)
Query: 47 LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
L TH+I S A+I++ + ++ + +T+K +NP++ T+LS+G G +
Sbjct: 29 LCTHVIYSFANISNNEID---TWEWNDVTLYDTLNTLKNRNPNLKTLLSVG-GWNFGSER 84
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
+S + + R++FI S R +GF GLD AW P D ++ L E + +
Sbjct: 85 FSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGWR-DKRHLTTLVKEMKAEFVR- 142
Query: 167 DAKNSTRQQSLLILTARFRYSPPA--NSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPP 224
+A+ T Q L+L+A A Y + I R+L++I +T ++
Sbjct: 143 EAQAGTEQ---LLLSAAVPAGKIAIDRGYDIAQISRHLDFISLLTYDFHGGWRGTVGHHS 199
Query: 225 AALYGSISG--RFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA 282
G+ G RF+ + D + + G A+KLVM +P +G ++TL + + +GA +
Sbjct: 200 PLFRGNSDGSSRFSNA-DYAVSYMLRLGAPANKLVMGIPTFGRSYTLASSKTD-VGAPIS 257
Query: 283 GPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVR 337
GP + + G + Y +I + + +G + +V Y + G W +DD E+V+
Sbjct: 258 GPGIPGQFTKEKGTLAYYEICDFL--HGATTHRFRDQ--QVPYATKGNQWVAYDDQESVK 313
Query: 338 AKIAYAKEKRLLGYYAWQVSFDD 360
K Y K ++L G W + DD
Sbjct: 314 NKARYLKNRQLAGAMVWALDLDD 336
>pdb|1TFV|A Chain A, Crystal Structure Of A Buffalo Signaling Glycoprotein
(Spb-40) Secreted During Involution
pdb|2O9O|A Chain A, Crystal Structure Of The Buffalo Secretory Signalling
Glycoprotein At 2.8 A Resolution
pdb|2QF8|A Chain A, Crystal Structure Of The Complex Of Buffalo Secretory
Glycoprotein With Tetrasaccharide At 2.8a Resolution
Length = 361
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 152/323 (47%), Gaps = 24/323 (7%)
Query: 47 LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
L TH+I S A+I++ + ++ + +T+K +NP++ T+LS+G G +
Sbjct: 29 LCTHVIYSFANISNNEID---TWEWNDVTLYDTLNTLKNRNPNLKTLLSVG-GWNYGSQR 84
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
+S + + R++FI S R +GF GLD AW P D ++ L E + +
Sbjct: 85 FSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLWPGWR-DKRHLTTLVKEMKAEFVR- 142
Query: 167 DAKNSTRQQSLLILTARFRYSPPA--NSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPP 224
+A+ T Q L+L+A A Y + I R+L++I +T ++
Sbjct: 143 EAQAGTEQ---LLLSAAVTAGKIAIDRGYDIAQISRHLDFISLLTYDFHGAWRQTVGHHS 199
Query: 225 AALYGS--ISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA 282
G+ S RF+ + D + + G A+KLVM +P +G ++TL + + +GA +
Sbjct: 200 PLFRGNEDASSRFSNA-DYAVSYMLRLGAPANKLVMGIPTFGRSYTLASSKTD-VGAPIS 257
Query: 283 GPALYD-----SGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVR 337
GP + G++ Y +I + + +G + +V Y + G W +DD E+V+
Sbjct: 258 GPGIPGRFTKWKGILAYYEICDFL--HGATTHRFRDQ--QVPYATKGNQWVAYDDQESVK 313
Query: 338 AKIAYAKEKRLLGYYAWQVSFDD 360
K Y K ++L G W + DD
Sbjct: 314 NKARYLKNRQLAGAMVWALDLDD 336
>pdb|1ZBV|A Chain A, Crystal Structure Of The Goat Signalling Protein (Spg-40)
Complexed With A Designed Peptide Trp-Pro-Trp At 3.2a
Resolution
pdb|1ZBW|A Chain A, Crystal Structure Of The Complex Formed Between Signalling
Protein From Goat Mammary Gland (Spg-40) And A
Tripeptide Trp-Pro-Trp At 2.8a Resolution
pdb|1ZU8|A Chain A, Crystal Structure Of The Goat Signalling Protein With A
Bound Trisaccharide Reveals That Trp78 Reduces The
Carbohydrate Binding Site To Half
pdb|2AOS|A Chain A, Protein-protein Interactions Of Protective Signalling
Factor: Crystal Structure Of Ternary Complex Involving
Signalling Protein From Goat (spg-40), Tetrasaccharide
And A Tripeptide Trp-pro-trp At 2.9 A Resolution
pdb|2B31|A Chain A, Crystal Structure Of The Complex Formed Between Goat
Signalling Protein With Pentasaccharide At 3.1 A
Resolution Reveals Large Scale Conformational Changes In
The Residues Of Tim Barrel
pdb|2DSZ|A Chain A, Three Dimensional Structure Of A Goat Signalling Protein
Secreted During Involution
pdb|2DT0|A Chain A, Crystal Structure Of The Complex Of Goat Signalling
Protein With The Trimer Of N-acetylglucosamine At 2.45a
Resolution
pdb|2DT1|A Chain A, Crystal Structure Of The Complex Of Goat Signalling
Protein With Tetrasaccharide At 2.09 A Resolution
pdb|2DT2|A Chain A, Crystal Structure Of The Complex Formed Between Goat
Signalling Protein With Pentasaccharide At 2.9a
Resolution
pdb|2DT3|A Chain A, Crystal Structure Of The Complex Formed Between Goat
Signalling Protein And The Hexasaccharide At 2.28 A
Resolution
pdb|2O92|A Chain A, Crystal Structure Of A Signalling Protein (Spg-40) Complex
With Tetrasaccharide At 3.0a Resolution
pdb|2OLH|A Chain A, Crystal Structure Of A Signalling Protein (Spg-40) Complex
With Cellobiose At 2.78 A Resolution
Length = 361
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 152/323 (47%), Gaps = 24/323 (7%)
Query: 47 LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
L TH+I S A+I++ + ++ + +T+K +NP + T+LS+G G +
Sbjct: 29 LCTHVIYSFANISNNEID---TWEWNDVTLYDTLNTLKNRNPKLKTLLSVG-GWNFGPER 84
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
+S + + R++FI S R +GF GLD AW P D ++ L E + A
Sbjct: 85 FSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRR-DKRHLTALVKEMK-AEFAR 142
Query: 167 DAKNSTRQQSLLILTARFRYSPPA--NSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPP 224
+A+ T + L+L+A A Y + I R+L++I +T ++
Sbjct: 143 EAQAGTER---LLLSAAVSAGKIAIDRGYDIAQISRHLDFISLLTYDFHGAWRQTVGHHS 199
Query: 225 AALYGS--ISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA 282
G+ S RF+ + D + + G A+KLVM +P +G ++TL + + +GA +
Sbjct: 200 PLFRGNSDASSRFS-NADYAVSYMLRLGAPANKLVMGIPTFGRSFTLASSKTD-VGAPIS 257
Query: 283 GPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVR 337
GP + + G++ Y +I + + +G + +V Y + G W +DD E+V+
Sbjct: 258 GPGIPGRFTKEKGILAYYEICDFL--HGATTHRFRDQ--QVPYATKGNQWVAYDDQESVK 313
Query: 338 AKIAYAKEKRLLGYYAWQVSFDD 360
K Y K ++L G W + DD
Sbjct: 314 NKARYLKNRQLAGAMVWALDLDD 336
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 66/99 (66%), Gaps = 1/99 (1%)
Query: 450 NLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFE-EFK 508
L+ +SL +++ A++ F +N LG GG+G VYKG L G ++AVK+L + TQG E +F+
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 509 NEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
EV + + H NL+R+ GFC+ ER+L+Y YM N S+
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSV 114
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 66/99 (66%), Gaps = 1/99 (1%)
Query: 450 NLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFE-EFK 508
L+ +SL +++ A++ FS +N LG GG+G VYKG L G ++AVK+L + QG E +F+
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 509 NEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
EV + + H NL+R+ GFC+ ER+L+Y YM N S+
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSV 122
>pdb|1ITX|A Chain A, Catalytic Domain Of Chitinase A1 From Bacillus Circulans
Wl-12
Length = 419
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 137/318 (43%), Gaps = 54/318 (16%)
Query: 74 NQIAKFADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF 133
NQ+ K +K+ NP++ TI+S+G +N +S + ++ R+ F +S++ R Y F
Sbjct: 111 NQLNK----LKQTNPNLKTIISVGGWTWSNR--FSDVAATAATREVFANSAVDFLRKYNF 164
Query: 134 RGLDFAWTAPNTS---------TDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARF 184
G+D W P + D N LL + R KLDA + + L+ A
Sbjct: 165 DGVDLDWEYPVSGGLDGNSKRPEDKQNYTLLLSKIR---EKLDAAGAVDGKKYLLTIASG 221
Query: 185 RYSPPANSYLLNSIQRNLNWIHAVTASY---------------YEPVSTNFTAPPAALYG 229
+ A + L I ++WI+ +T + Y+P ++ P A +
Sbjct: 222 ASATYAANTELAKIAAIVDWINIMTYDFNGAWQKISAHNAPLNYDPAASAAGVPDANTFN 281
Query: 230 SISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNG-----IGAAAAGP 284
+G ++ G+ A KLV+ +PFYG W NG G ++ G
Sbjct: 282 VAAGAQGH---------LDAGVPAAKLVLGVPFYGRGWDGCAQAGNGQYQTCTGGSSVG- 331
Query: 285 ALYDSGLVTYKKIK-NHIKTYGPDVQVMYNSTYEVNYF--STGTVWFGFDDVEAVRAKIA 341
+++G + ++ N+I G +N T +V Y ++ + +DD E+V K A
Sbjct: 332 -TWEAGSFDFYDLEANYINKNG--YTRYWNDTAKVPYLYNASNKRFISYDDAESVGYKTA 388
Query: 342 YAKEKRLLGYYAWQVSFD 359
Y K K L G W++S D
Sbjct: 389 YIKSKGLGGAMFWELSGD 406
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 61/104 (58%), Gaps = 11/104 (10%)
Query: 454 YSLADIEAATERFSIR------NKLGEGGYGPVYKGVLPCGEVIAVKKLSK----TSTQG 503
+S +++ T F R NK+GEGG+G VYKG + +AVKKL+ T+ +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEEL 73
Query: 504 FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
++F E+ + AK QH NL+ +LGF D ++ L+Y YMPN SL
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 117
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 61/104 (58%), Gaps = 11/104 (10%)
Query: 454 YSLADIEAATERFSIR------NKLGEGGYGPVYKGVLPCGEVIAVKKLSK----TSTQG 503
+S +++ T F R NK+GEGG+G VYKG + +AVKKL+ T+ +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEEL 73
Query: 504 FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
++F E+ + AK QH NL+ +LGF D ++ L+Y YMPN SL
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 117
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 61/104 (58%), Gaps = 11/104 (10%)
Query: 454 YSLADIEAATERFSIR------NKLGEGGYGPVYKGVLPCGEVIAVKKLSK----TSTQG 503
+S +++ T F R NK+GEGG+G VYKG + +AVKKL+ T+ +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEEL 67
Query: 504 FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
++F E+ + AK QH NL+ +LGF D ++ L+Y YMPN SL
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 111
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 63/98 (64%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTA 515
L D+E AT F + +G G +G VYKGVL G +A+K+ + S+QG EEF+ E+ +
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 516 KLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFG 553
+H +L+ ++GFC + E +LIY+YM N +L +L+G
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYG 128
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 63/98 (64%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTA 515
L D+E AT F + +G G +G VYKGVL G +A+K+ + S+QG EEF+ E+ +
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 516 KLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFG 553
+H +L+ ++GFC + E +LIY+YM N +L +L+G
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYG 128
>pdb|3G6L|A Chain A, The Crystal Structure Of A Chitinase Crchi1 From The
Nematophagous Fungus Clonostachys Rosea
pdb|3G6M|A Chain A, Crystal Structure Of A Chitinase Crchi1 From The
Nematophagous Fungus Clonostachys Rosea In Complex With
A Potent Inhibitor Caffeine
Length = 406
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 129/285 (45%), Gaps = 24/285 (8%)
Query: 83 VKKKNPSITTILSIGQGK-DTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWT 141
+KK N S+ +LSIG TN+ +S + R +F +++ + +GF G+D W
Sbjct: 98 LKKANRSLKIMLSIGGWTWSTNFPAAAS---TEATRATFAKTAVEFMKDWGFDGIDVDWE 154
Query: 142 APNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYL-----LN 196
P + TD N+ LL R +LD+ ++T + + P++ + L
Sbjct: 155 YPASETDANNMVLLLQRVR---QELDSYSATYANGYHFQLSIAAPAGPSHYNVLKLAQLG 211
Query: 197 SIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFAR--STDQVLKAWIERGLSAD 254
S+ N+N + A ++ VS + T LY S S + ST + A+I G+ A
Sbjct: 212 SVLDNINLMAYDYAGSWDSVSGHQT----NLYPSTSNPSSTPFSTKAAVDAYIAAGVPAS 267
Query: 255 KLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNS 314
K+++ +P YG A V + G + G ++SG+ YK + T D +
Sbjct: 268 KIILGMPIYGRA--FVGTDGPGKPYSTIGEGSWESGIWDYKVLPKAGATVITDSAA--GA 323
Query: 315 TYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFD 359
TY +Y S+ +D + VR K++YAK L G W+ S D
Sbjct: 324 TY--SYDSSSRTMISYDTPDMVRTKVSYAKGLGLGGSMFWEASAD 366
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 11/104 (10%)
Query: 454 YSLADIEAATERFSIR------NKLGEGGYGPVYKGVLPCGEVIAVKKLSK----TSTQG 503
+S +++ T F R NK GEGG+G VYKG + +AVKKL+ T+ +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEEL 64
Query: 504 FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
++F E+ + AK QH NL+ +LGF D ++ L+Y Y PN SL
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSL 108
>pdb|1JND|A Chain A, Crystal Structure Of Imaginal Disc Growth Factor-2
pdb|1JNE|A Chain A, Crystal Structure Of Imaginal Disc Growth Factor-2
Length = 420
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 153/375 (40%), Gaps = 71/375 (18%)
Query: 49 THLICSSADI---NSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNY- 104
+HL+ A + N Y ++ +L ++Q ++ ++K+K P + +LS+G D +
Sbjct: 34 SHLVYGYAGLRGENLQAYSMNENLDIYKHQFSEVT-SLKRKYPHLKVLLSVGGDHDIDPD 92
Query: 105 --SIYSSMVRNSSHRK-SFIDSSIRIARLYGFRGLDFAWTAPNTST-------------- 147
+ Y ++ R+ FI S+ + + YGF GLD A+ P
Sbjct: 93 HPNKYIDLLEGEKVRQIGFIRSAYELVKTYGFDGLDLAYQFPKNKPRKVHGDLGLAWKSI 152
Query: 148 -DMFNIGLLFD------EWRIAATKLDAKNSTRQQSLLI-------LTARFRYSPPANSY 193
+F + D + + A D K+S R L+ + + + + PA +
Sbjct: 153 KKLFTGDFIVDPHAALHKEQFTALVRDVKDSLRADGFLLSLTVLPNVNSTWYFDIPALNG 212
Query: 194 LLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSA 253
L++ + NL +T + P +++AP GS + D ++ W+ +G +
Sbjct: 213 LVDFV--NLATFDFLTPAR-NPEEADYSAPIYHPDGSKDRLAHLNADFQVEYWLSQGFPS 269
Query: 254 DKLVMCLPFYGYAWTLVKPEDNGI----------GAAAAGPALYDSGLVTYKKIKNHIKT 303
+K+ + + YG AW L K D+G+ G A G GL++Y +I +
Sbjct: 270 NKINLGVATYGNAWKLTK--DSGLEGVPVVPETSGPAPEGFQSQKPGLLSYAEICGKLSN 327
Query: 304 YGPDVQVMYNSTYEVNYFSTGT------------------VWFGFDDVEAVRAKIAYAKE 345
P Q + + + S T +W +DD ++ K AYA+
Sbjct: 328 --PQNQFLKGNESPLRRVSDPTKRFGGIAYRPVDGQITEGIWVSYDDPDSASNKAAYARV 385
Query: 346 KRLLGYYAWQVSFDD 360
K L G + +S+DD
Sbjct: 386 KNLGGVALFDLSYDD 400
>pdb|1EIB|A Chain A, Crystal Structure Of Chitinase A Mutant D313a Complexed
With Octa-N- Acetylchitooctaose (Nag)8
Length = 540
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 134/319 (42%), Gaps = 45/319 (14%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
+K+ +P + + SIG ++ + + + R F+ S + + F G+D AW
Sbjct: 236 LKQAHPDLKILPSIGGWTLSDPFFF---MGDKVKRDRFVGSVKEFLQTWKFFDGVDIAWE 292
Query: 142 APNTSTDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
P N+G LL E R +L + + + ++A +
Sbjct: 293 FPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAG---KDKIDK 349
Query: 193 YLLNSIQRNLNWIHAVTASYYEPV-------STNFTAP---PAALYGSISGRFARSTDQV 242
N Q +++ I ++ +Y T AP P Y +++G
Sbjct: 350 VAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG--------- 400
Query: 243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI--GAAAAGP--ALYDSGLVTYKKIK 298
+ A + +G+ K+V+ YG WT V N I A GP +++G+V Y++I
Sbjct: 401 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 299 NHIKTYGPDVQVMYNSTYEVNYF---STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQ 355
+ + Q Y++T E Y STG + FDD +V+AK Y +K+L G ++W+
Sbjct: 461 GQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 356 VSFDDHDWLLSQAAAQKDS 374
+ D+ D L S A+ +S
Sbjct: 518 IDADNGDILNSMNASLGNS 536
>pdb|1RD6|A Chain A, Crystal Structure Of S. Marcescens Chitinase A Mutant
W167a
pdb|1X6L|A Chain A, Crystal Structure Of S. Marcescens Chitinase A Mutant
W167a
pdb|1X6N|A Chain A, Crystal Structure Of S. Marcescens Chitinase A Mutant
W167a In Complex With Allosamidin
Length = 563
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 135/319 (42%), Gaps = 45/319 (14%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
+K+ +P + + SIG ++ + + + R F+ S + + F G+D W
Sbjct: 259 LKQAHPDLKILPSIGGWTLSDPFFF---MGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWE 315
Query: 142 APNTSTDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
P N+G LL E R +L A+ + + ++A +
Sbjct: 316 FPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSAETGRKYELTSAISAG---KDKIDK 372
Query: 193 YLLNSIQRNLNWIHAVTASYYEPV-------STNFTAP---PAALYGSISGRFARSTDQV 242
N Q +++ I ++ +Y T AP P Y +++G
Sbjct: 373 VAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG--------- 423
Query: 243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI--GAAAAGP--ALYDSGLVTYKKIK 298
+ A + +G+ K+V+ YG WT V N I A GP +++G+V Y++I
Sbjct: 424 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 483
Query: 299 NHIKTYGPDVQVMYNSTYEVNYF---STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQ 355
+ + + Q Y++T E Y STG + FDD +V+AK Y +K+L G ++W+
Sbjct: 484 SQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 540
Query: 356 VSFDDHDWLLSQAAAQKDS 374
+ D+ D L S A+ +S
Sbjct: 541 IDADNGDILNSMNASLGNS 559
>pdb|1LL7|A Chain A, Structure Of The E171q Mutant Of C. Immitis Chitinase 1
pdb|1LL7|B Chain B, Structure Of The E171q Mutant Of C. Immitis Chitinase 1
Length = 392
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 122/293 (41%), Gaps = 40/293 (13%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTA 142
+KK N ++ T+LSIG T + + RK F D+S+++ + GF G+D W
Sbjct: 80 LKKNNRNLKTLLSIGGW--TYSPNFKTPASTEEGRKKFADTSLKLMKDLGFDGIDIDWQY 137
Query: 143 PNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPA-----NSYLLNS 197
P + LL R A AK+ ++ LL + + PA N L
Sbjct: 138 PEDEKQANDFVLLLKACREALDAYSAKHPNGKKFLLTIAS------PAGPQNYNKLKLAE 191
Query: 198 IQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARST---------DQVLKAWIE 248
+ + L+ ++ ++ +F+ + G +S F +T D+ +K +I+
Sbjct: 192 MDKYLD--------FWNLMAYDFSGSWDKVSGHMSNVFPSTTKPESTPFSSDKAVKDYIK 243
Query: 249 RGLSADKLVMCLPFYGYAWTLVKPEDNGIGAA--AAGPALYDSGLVTYKKIKNHIKTYGP 306
G+ A+K+V+ +P YG A+ +GIG + G +++G+ YK + G
Sbjct: 244 AGVPANKIVLGMPLYGRAFAST----DGIGTSFNGVGGGSWENGVWDYKDMPQQ----GA 295
Query: 307 DVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFD 359
V + + +Y +D V+ K Y + + G W+ S D
Sbjct: 296 QVTELEDIAASYSYDKNKRYLISYDTVKIAGKKAEYITKNGMGGGMWWESSSD 348
>pdb|1D2K|A Chain A, C. Immitis Chitinase 1 At 2.2 Angstroms Resolution
pdb|1LL4|A Chain A, Structure Of C. Immitis Chitinase 1 Complexed With
Allosamidin
pdb|1LL4|B Chain B, Structure Of C. Immitis Chitinase 1 Complexed With
Allosamidin
pdb|1LL4|C Chain C, Structure Of C. Immitis Chitinase 1 Complexed With
Allosamidin
pdb|1LL4|D Chain D, Structure Of C. Immitis Chitinase 1 Complexed With
Allosamidin
Length = 392
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 122/293 (41%), Gaps = 40/293 (13%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTA 142
+KK N ++ T+LSIG T + + RK F D+S+++ + GF G+D W
Sbjct: 80 LKKNNRNLKTLLSIGGW--TYSPNFKTPASTEEGRKKFADTSLKLMKDLGFDGIDIDWEY 137
Query: 143 PNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPA-----NSYLLNS 197
P + LL R A AK+ ++ LL + + PA N L
Sbjct: 138 PEDEKQANDFVLLLKACREALDAYSAKHPNGKKFLLTIAS------PAGPQNYNKLKLAE 191
Query: 198 IQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARST---------DQVLKAWIE 248
+ + L+ ++ ++ +F+ + G +S F +T D+ +K +I+
Sbjct: 192 MDKYLD--------FWNLMAYDFSGSWDKVSGHMSNVFPSTTKPESTPFSSDKAVKDYIK 243
Query: 249 RGLSADKLVMCLPFYGYAWTLVKPEDNGIGAA--AAGPALYDSGLVTYKKIKNHIKTYGP 306
G+ A+K+V+ +P YG A+ +GIG + G +++G+ YK + G
Sbjct: 244 AGVPANKIVLGMPLYGRAFAST----DGIGTSFNGVGGGSWENGVWDYKDMPQQ----GA 295
Query: 307 DVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFD 359
V + + +Y +D V+ K Y + + G W+ S D
Sbjct: 296 QVTELEDIAASYSYDKNKRYLISYDTVKIAGKKAEYITKNGMGGGMWWESSSD 348
>pdb|2WLY|A Chain A, Chitinase A From Serratia Marcescens Atcc990 In Complex
With Chitotrio-Thiazoline.
pdb|2WLZ|A Chain A, Chitinase A From Serratia Marcescens Atcc990 In Complex
With Chitobio-Thiazoline.
pdb|2WM0|A Chain A, Chitinase A From Serratia Marcescens Atcc990 In Complex
With Chitobio-Thiazoline Thioamide
Length = 548
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 135/319 (42%), Gaps = 45/319 (14%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
+K+ +P + + SIG ++ + + + R F+ S + + F G+D W
Sbjct: 236 LKQAHPDLKILPSIGGWTLSDPFFF---MGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWE 292
Query: 142 APNTSTDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
P N+G LL E R +L A+ + + ++A +
Sbjct: 293 FPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSAETGRKYELTSAISAG---KDKIDK 349
Query: 193 YLLNSIQRNLNWIHAVTASYYEPV-------STNFTAP---PAALYGSISGRFARSTDQV 242
N Q +++ I ++ +Y T AP P Y +++G
Sbjct: 350 VAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG--------- 400
Query: 243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI--GAAAAGP--ALYDSGLVTYKKIK 298
+ A + +G+ K+V+ YG WT V N I A GP +++G+V Y++I
Sbjct: 401 VNALLTQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 299 NHIKTYGPDVQVMYNSTYEVNYF---STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQ 355
+ + + Q Y++T E Y STG + FDD +V+AK Y +K+L G ++W+
Sbjct: 461 SQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 356 VSFDDHDWLLSQAAAQKDS 374
+ D+ D L S A+ +S
Sbjct: 518 IDADNGDILNSMNASLGNS 536
>pdb|1LL6|A Chain A, Structure Of The D169n Mutant Of C. Immitis Chitinase 1
pdb|1LL6|B Chain B, Structure Of The D169n Mutant Of C. Immitis Chitinase 1
pdb|1LL6|C Chain C, Structure Of The D169n Mutant Of C. Immitis Chitinase 1
pdb|1LL6|D Chain D, Structure Of The D169n Mutant Of C. Immitis Chitinase 1
Length = 392
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 122/293 (41%), Gaps = 40/293 (13%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTA 142
+KK N ++ T+LSIG T + + RK F D+S+++ + GF G+D W
Sbjct: 80 LKKNNRNLKTLLSIGGW--TYSPNFKTPASTEEGRKKFADTSLKLMKDLGFDGIDINWEY 137
Query: 143 PNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPA-----NSYLLNS 197
P + LL R A AK+ ++ LL + + PA N L
Sbjct: 138 PEDEKQANDFVLLLKACREALDAYSAKHPNGKKFLLTIAS------PAGPQNYNKLKLAE 191
Query: 198 IQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARST---------DQVLKAWIE 248
+ + L+ ++ ++ +F+ + G +S F +T D+ +K +I+
Sbjct: 192 MDKYLD--------FWNLMAYDFSGSWDKVSGHMSNVFPSTTKPESTPFSSDKAVKDYIK 243
Query: 249 RGLSADKLVMCLPFYGYAWTLVKPEDNGIGAA--AAGPALYDSGLVTYKKIKNHIKTYGP 306
G+ A+K+V+ +P YG A+ +GIG + G +++G+ YK + G
Sbjct: 244 AGVPANKIVLGMPLYGRAFAST----DGIGTSFNGVGGGSWENGVWDYKDMPQQ----GA 295
Query: 307 DVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFD 359
V + + +Y +D V+ K Y + + G W+ S D
Sbjct: 296 QVTELEDIAASYSYDKNKRYLISYDTVKIAGKKAEYITKNGMGGGMWWESSSD 348
>pdb|2WK2|A Chain A, Chitinase A From Serratia Marcescens Atcc990 In Complex
With Chitotrio-Thiazoline Dithioamide
Length = 540
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 135/319 (42%), Gaps = 45/319 (14%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
+K+ +P + + SIG ++ + + + R F+ S + + F G+D W
Sbjct: 236 LKQAHPDLKILPSIGGWTLSDPFFF---MGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWE 292
Query: 142 APNTSTDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
P N+G LL E R +L A+ + + ++A +
Sbjct: 293 FPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSAETGRKYELTSAISAG---KDKIDK 349
Query: 193 YLLNSIQRNLNWIHAVTASYYEPV-------STNFTAP---PAALYGSISGRFARSTDQV 242
N Q +++ I ++ +Y T AP P Y +++G
Sbjct: 350 VAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG--------- 400
Query: 243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIG--AAAAGP--ALYDSGLVTYKKIK 298
+ A + +G+ K+V+ YG WT V N I A GP +++G+V Y++I
Sbjct: 401 VNALLTQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 299 NHIKTYGPDVQVMYNSTYEVNYF---STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQ 355
+ + + Q Y++T E Y STG + FDD +V+AK Y +K+L G ++W+
Sbjct: 461 SQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 356 VSFDDHDWLLSQAAAQKDS 374
+ D+ D L S A+ +S
Sbjct: 518 IDADNGDILNSMNASLGNS 536
>pdb|1K9T|A Chain A, Chitinase A Complexed With Tetra-N-Acetylchitotriose
Length = 540
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 134/319 (42%), Gaps = 45/319 (14%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
+K+ +P + + SIG ++ + + + R F+ S + + F G+D W
Sbjct: 236 LKQAHPDLKILPSIGGWTLSDPFFF---MGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWE 292
Query: 142 APNTSTDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
P N+G LL E R +L + + + ++A +
Sbjct: 293 FPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAG---KDKIDK 349
Query: 193 YLLNSIQRNLNWIHAVTASYYEPV-------STNFTAP---PAALYGSISGRFARSTDQV 242
N Q +++ I ++ ++Y T AP P Y +++G
Sbjct: 350 VAYNVAQNSMDHIFLMSYAFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG--------- 400
Query: 243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI--GAAAAGP--ALYDSGLVTYKKIK 298
+ A + +G+ K+V+ YG WT V N I A GP +++G+V Y++I
Sbjct: 401 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 299 NHIKTYGPDVQVMYNSTYEVNYF---STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQ 355
+ + Q Y++T E Y STG + FDD +V+AK Y +K+L G ++W+
Sbjct: 461 GQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 356 VSFDDHDWLLSQAAAQKDS 374
+ D+ D L S A+ +S
Sbjct: 518 IDADNGDILNSMNASLGNS 536
>pdb|1CTN|A Chain A, Crystal Structure Of A Bacterial Chitinase At 2.3
Angstroms Resolution
Length = 540
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 133/319 (41%), Gaps = 45/319 (14%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
+K+ +P + + SIG ++ + + + R F+ S + + F G+D W
Sbjct: 236 LKQAHPDLKILPSIGGWTLSDPFFF---MGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWE 292
Query: 142 APNTSTDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
P N+G LL E R +L + + + ++A +
Sbjct: 293 FPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSTETGRKYELTSAISAG---KDKIDK 349
Query: 193 YLLNSIQRNLNWIHAVTASYYEPV-------STNFTAP---PAALYGSISGRFARSTDQV 242
N Q +++ I ++ +Y T AP P Y +++G
Sbjct: 350 VAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG--------- 400
Query: 243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI--GAAAAGP--ALYDSGLVTYKKIK 298
+ A + +G+ K+V+ YG WT V N I A GP +++G+V Y++I
Sbjct: 401 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 299 NHIKTYGPDVQVMYNSTYEVNYF---STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQ 355
+ + Q Y++T E Y STG + FDD +V+AK Y +K+L G ++W+
Sbjct: 461 GQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 356 VSFDDHDWLLSQAAAQKDS 374
+ D+ D L S A+ +S
Sbjct: 518 IDADNGDILNSMNASLGNS 536
>pdb|1FFR|A Chain A, Crystal Structure Of Chitinase A Mutant Y390f Complexed
With Hexa-n- Acetylchitohexaose (nag)6
Length = 540
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 133/319 (41%), Gaps = 45/319 (14%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
+K+ +P + + SIG ++ + + + R F+ S + + F G+D W
Sbjct: 236 LKQAHPDLKILPSIGGWTLSDPFFF---MGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWE 292
Query: 142 APNTSTDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
P N+G LL E R +L + + + ++A +
Sbjct: 293 FPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAG---KDKIDK 349
Query: 193 YLLNSIQRNLNWIHAVTASYYEPV-------STNFTAP---PAALYGSISGRFARSTDQV 242
N Q +++ I ++ +Y T AP P Y +++G
Sbjct: 350 VAYNVAQNSMDHIFLMSFDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG--------- 400
Query: 243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI--GAAAAGP--ALYDSGLVTYKKIK 298
+ A + +G+ K+V+ YG WT V N I A GP +++G+V Y++I
Sbjct: 401 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 299 NHIKTYGPDVQVMYNSTYEVNYF---STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQ 355
+ + Q Y++T E Y STG + FDD +V+AK Y +K+L G ++W+
Sbjct: 461 GQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 356 VSFDDHDWLLSQAAAQKDS 374
+ D+ D L S A+ +S
Sbjct: 518 IDADNGDILNSMNASLGNS 536
>pdb|1EHN|A Chain A, Crystal Structure Of Chitinase A Mutant E315q Complexed
With Octa-N- Acetylchitooctaose (Nag)8
Length = 540
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 133/319 (41%), Gaps = 45/319 (14%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
+K+ +P + + SIG ++ + + + R F+ S + + F G+D W
Sbjct: 236 LKQAHPDLKILPSIGGWTLSDPFFF---MGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWQ 292
Query: 142 APNTSTDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
P N+G LL E R +L + + + ++A +
Sbjct: 293 FPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAG---KDKIDK 349
Query: 193 YLLNSIQRNLNWIHAVTASYYEPV-------STNFTAP---PAALYGSISGRFARSTDQV 242
N Q +++ I ++ +Y T AP P Y +++G
Sbjct: 350 VAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG--------- 400
Query: 243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI--GAAAAGP--ALYDSGLVTYKKIK 298
+ A + +G+ K+V+ YG WT V N I A GP +++G+V Y++I
Sbjct: 401 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 299 NHIKTYGPDVQVMYNSTYEVNYF---STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQ 355
+ + Q Y++T E Y STG + FDD +V+AK Y +K+L G ++W+
Sbjct: 461 GQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 356 VSFDDHDWLLSQAAAQKDS 374
+ D+ D L S A+ +S
Sbjct: 518 IDADNGDILNSMNASLGNS 536
>pdb|1EDQ|A Chain A, Crystal Structure Of Chitinase A From S. Marcescens At
1.55 Angstroms
pdb|1FFQ|A Chain A, Crystal Structure Of Chitinase A Complexed With
Allosamidin
Length = 540
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 133/319 (41%), Gaps = 45/319 (14%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
+K+ +P + + SIG ++ + + + R F+ S + + F G+D W
Sbjct: 236 LKQAHPDLKILPSIGGWTLSDPFFF---MGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWE 292
Query: 142 APNTSTDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
P N+G LL E R +L + + + ++A +
Sbjct: 293 FPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAG---KDKIDK 349
Query: 193 YLLNSIQRNLNWIHAVTASYYEPV-------STNFTAP---PAALYGSISGRFARSTDQV 242
N Q +++ I ++ +Y T AP P Y +++G
Sbjct: 350 VAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG--------- 400
Query: 243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI--GAAAAGP--ALYDSGLVTYKKIK 298
+ A + +G+ K+V+ YG WT V N I A GP +++G+V Y++I
Sbjct: 401 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 299 NHIKTYGPDVQVMYNSTYEVNYF---STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQ 355
+ + Q Y++T E Y STG + FDD +V+AK Y +K+L G ++W+
Sbjct: 461 GQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 356 VSFDDHDWLLSQAAAQKDS 374
+ D+ D L S A+ +S
Sbjct: 518 IDADNGDILNSMNASLGNS 536
>pdb|1NH6|A Chain A, Structure Of S. Marcescens Chitinase A, E315l, Complex
With Hexasaccharide
Length = 540
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 134/319 (42%), Gaps = 45/319 (14%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
+K+ +P + + SIG ++ + + + R F+ S + + F G+D W
Sbjct: 236 LKQAHPDLKILPSIGGWTLSDPFFF---MGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWL 292
Query: 142 APNTSTDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
P N+G LL E R +L + + + ++A +
Sbjct: 293 FPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAG---KDKIDK 349
Query: 193 YLLNSIQRNLNWIHAVTASYYEPV-------STNFTAP---PAALYGSISGRFARSTDQV 242
N Q +++ I ++ +Y T AP P Y +++G
Sbjct: 350 VAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG--------- 400
Query: 243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIG--AAAAGP--ALYDSGLVTYKKIK 298
+ A + +G+ K+V+ YG WT V N I A GP +++G+V Y++I
Sbjct: 401 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 299 NHIKTYGPDVQVMYNSTYEVNYF---STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQ 355
+ + + Q Y++T E Y STG + FDD +V+AK Y +K+L G ++W+
Sbjct: 461 SQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 356 VSFDDHDWLLSQAAAQKDS 374
+ D+ D L S A+ +S
Sbjct: 518 IDADNGDILNSMNASLGNS 536
>pdb|1W9P|A Chain A, Specificity And Affinity Of Natural Product
Cyclopentapeptide Inhibitors Against Aspergillus
Fumigatus, Human And Bacterial Chitinasefra
pdb|1W9P|B Chain B, Specificity And Affinity Of Natural Product
Cyclopentapeptide Inhibitors Against Aspergillus
Fumigatus, Human And Bacterial Chitinasefra
pdb|1W9U|A Chain A, Specificity And Affnity Of Natural Product
Cyclopentapeptide Inhibitor Argadin Against Aspergillus
Fumigatus Chitinase
pdb|1W9U|B Chain B, Specificity And Affnity Of Natural Product
Cyclopentapeptide Inhibitor Argadin Against Aspergillus
Fumigatus Chitinase
pdb|1W9V|A Chain A, Specificity And Affinity Of Natural Product
Cyclopentapeptide Argifin Against Aspergillus Fumigatus
pdb|1W9V|B Chain B, Specificity And Affinity Of Natural Product
Cyclopentapeptide Argifin Against Aspergillus Fumigatus
pdb|2A3A|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Theophylline
pdb|2A3A|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Theophylline
pdb|2A3B|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Caffeine
pdb|2A3B|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Caffeine
pdb|2A3C|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Pentoxifylline
pdb|2A3C|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Pentoxifylline
pdb|2A3E|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Allosamidin
pdb|2A3E|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Allosamidin
pdb|2IUZ|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With C2-Dicaffeine
pdb|2IUZ|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With C2-Dicaffeine
pdb|3CH9|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Dimethylguanylurea
pdb|3CH9|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Dimethylguanylurea
pdb|3CHC|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Monopeptide
pdb|3CHC|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Monopeptide
pdb|3CHD|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Dipeptide
pdb|3CHD|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Dipeptide
pdb|3CHE|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Tripeptide
pdb|3CHE|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Tripeptide
pdb|3CHF|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Tetrapeptide
pdb|3CHF|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Tetrapeptide
Length = 433
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 117/287 (40%), Gaps = 28/287 (9%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTA 142
+KK+N ++ +LSIG T ++ + RK+F +++++ + GF GLD W
Sbjct: 121 LKKQNRNLKVLLSIGGW--TYSPNFAPAASTDAGRKNFAKTAVKLLQDLGFDGLDIDWEY 178
Query: 143 PNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYL----LNSI 198
P + LL E R A A N+ Q LL + SP + L +
Sbjct: 179 PENDQQANDFVLLLKEVRTALDSYSAANAGGQHFLLTVA-----SPAGPDKIKVLHLKDM 233
Query: 199 QRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFAR--STDQVLKAWIERGLSADKL 256
+ L++ + + Y S+ + A +Y S + +T L + G+ A+K+
Sbjct: 234 DQQLDFWNLMAYDYAGSFSS-LSGHQANVYNDTSNPLSTPFNTQTALDLYRAGGVPANKI 292
Query: 257 VMCLPFYGYAWTLV----KPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMY 312
V+ +P YG ++ KP NG+G + ++D + H+ PD+ Y
Sbjct: 293 VLGMPLYGRSFANTDGPGKPY-NGVGQGSWENGVWDYKALPQAGATEHVL---PDIMASY 348
Query: 313 NSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFD 359
+Y +T +D+ + K Y K L G W S D
Sbjct: 349 ------SYDATNKFLISYDNPQVANLKSGYIKSLGLGGAMWWDSSSD 389
>pdb|1WNO|A Chain A, Crystal Structure Of A Native Chitinase From Aspergillus
Fumigatus Yj- 407
pdb|1WNO|B Chain B, Crystal Structure Of A Native Chitinase From Aspergillus
Fumigatus Yj- 407
Length = 395
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 117/287 (40%), Gaps = 28/287 (9%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTA 142
+KK+N ++ +LSIG T ++ + RK+F +++++ + GF GLD W
Sbjct: 83 LKKQNRNLKVLLSIGGW--TYSPNFAPAASTDAGRKNFAKTAVKLLQDLGFDGLDIDWEY 140
Query: 143 PNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYL----LNSI 198
P + LL E R A A N+ Q LL + SP + L +
Sbjct: 141 PENDQQANDFVLLLREVRTALDSYSAANAGGQHFLLTVA-----SPAGPDKIKVLHLKDM 195
Query: 199 QRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFAR--STDQVLKAWIERGLSADKL 256
+ L++ + + Y S+ + A +Y S + +T L + G+ A+K+
Sbjct: 196 DQQLDFWNLMAYDYAGSFSS-LSGHQANVYNDTSNPLSTPFNTQTALDLYRAGGVPANKI 254
Query: 257 VMCLPFYGYAWTLV----KPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMY 312
V+ +P YG ++ KP NG+G + ++D + H+ PD+ Y
Sbjct: 255 VLGMPLYGRSFANTDGPGKPY-NGVGQGSWENGVWDYKALPQAGATEHVL---PDIMASY 310
Query: 313 NSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFD 359
+Y +T +D+ + K Y K L G W S D
Sbjct: 311 ------SYDATNKFLISYDNPQVANLKSGYIKSLGLGGAMWWDSSSD 351
>pdb|3ARS|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Apo Structure Of Mutant
W275g
pdb|3ART|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - W275g Mutant Complex
Structure With Dequalinium
pdb|3ARU|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - W275g Mutant Complex
Structure With Pentoxifylline
pdb|3AS0|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - W275g Mutant Complex
Structure With Sanguinarine
pdb|3AS1|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - W275g Mutant Complex
Structure With Chelerythrine
pdb|3AS2|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - W275g Mutant Complex
Structure With Propentofylline
pdb|3AS3|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - W275g Mutant Complex
Structure With 2-(Imidazolin-
2-Yl)-5-Isothiocyanatobenzofuran
Length = 584
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 136/335 (40%), Gaps = 66/335 (19%)
Query: 83 VKKKNPSITTILSIGQG--KDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFA 139
+K++NP + I SIG G D Y + +R +F+ S + + + F G+D
Sbjct: 238 LKQRNPDLKIIPSIGGGTLSDPFYDFV-----DKKNRDTFVASVKKFLKTWKFYDGVDID 292
Query: 140 WTAPNTST------DMFNIG----LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPP 189
W P D N G L E R+ +L+A+ T + L Y
Sbjct: 293 WEFPGGGGAAADKGDPVNDGPAYIALMRELRVMLDELEAE--TGRTYELTSAIGVGYDKI 350
Query: 190 ANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFAR------------ 237
+ +++Q +++I A+T +Y + N ALY G F R
Sbjct: 351 EDVDYADAVQY-MDYIFAMTYDFYGGWN-NVPGHQTALY---CGSFMRPGQCDGGGVDEN 405
Query: 238 ---------STDQVLKAWIERGLSADKLVMCLPFYGYAW------TLVKPEDNGIGAA-- 280
+ D ++ + +G+ A+KLV+ YG W TL P D G A
Sbjct: 406 GEPYKGPAYTADNGIQLLLAQGVPANKLVLGTAMYGRGWEGVTPDTLTDPNDPMTGTATG 465
Query: 281 ----AAGPALYDSGLVTYKKIKNHI----KTYGPDVQVMYNSTYEVNYF---STGTVWFG 329
+ +++ G++ YK IK+ + T + Y++ E + STG +
Sbjct: 466 KLKGSTAQGVWEDGVIDYKGIKSFMLGANNTGINGFEYGYDAQAEAPWVWNRSTGEL-IT 524
Query: 330 FDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWL 364
FDD +V AK YAK L G ++W++ D+ D L
Sbjct: 525 FDDHRSVLAKGNYAKSLGLAGLFSWEIDADNGDIL 559
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%)
Query: 450 NLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKN 509
NL S+ E ++++KLG G YG VY GV + K K T EEF
Sbjct: 18 NLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLK 77
Query: 510 EVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
E + +++H NL+++LG C ++ EYMP +L YL
Sbjct: 78 EAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL 119
>pdb|1UR9|A Chain A, Interactions Of A Family 18 Chitinase With The Designed
Inhibitor Hm508, And Its Degradation Product,
Chitobiono-Delta-Lactone
pdb|1UR9|B Chain B, Interactions Of A Family 18 Chitinase With The Designed
Inhibitor Hm508, And Its Degradation Product,
Chitobiono-Delta-Lactone
Length = 499
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 157/392 (40%), Gaps = 79/392 (20%)
Query: 37 VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTV------KKKNPSI 90
VS I+ TH+ S DINS L + N AK D V K NPS+
Sbjct: 33 VSNITPAKAKQLTHINFSFLDINSN---LECAWDPATND-AKARDVVNRLTALKAHNPSL 88
Query: 91 TTILSIGQGKDTN-----YSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT 145
+ SIG +N ++ Y + V+ + R F S +RI + YGF G+D W P
Sbjct: 89 RIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVDINWEYPQA 148
Query: 146 S-TDMFNIGLLFDEWRI---AATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRN 201
+ D F L E R T D + + Q L I A + L I
Sbjct: 149 AEVDGFIAAL--QEIRTLLNQQTITDGRQALPYQ-LTIAGAGGAFFLSRYYSKLAQIVAP 205
Query: 202 LNWIHAVT---ASYYEPVSTNFTAPPAALYGSISG------------------------- 233
L++I+ +T A +E V+ + AAL+G +G
Sbjct: 206 LDYINLMTYDLAGPWEKVTNH----QAALFGDAAGPTFYNALREANLGWSWEELTRAFPS 261
Query: 234 RFARSTD-QVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPAL------ 286
F+ + D V + + G+ + K+VM +PFYG A+ V + G ++ + P
Sbjct: 262 PFSLTVDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPST 321
Query: 287 -------------YDSGLVTYKKIKNHIK-TYGPDVQVMYNSTYEVNYF--STGTVWFGF 330
D + +Y++++ ++ YG Q ++N + Y + ++ +
Sbjct: 322 DYWLVGCEECVRDKDPRIASYRQLEQMLQGNYG--YQRLWNDKTKTPYLYHAQNGLFVTY 379
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD 362
DD E+ + K Y K+++L G W + D+ +
Sbjct: 380 DDAESFKYKAKYIKQQQLGGVMFWHLGQDNRN 411
>pdb|1H0G|A Chain A, Complex Of A Chitinase With The Natural Product
Cyclopentapeptide Argadin From Clonostachys
pdb|1H0G|B Chain B, Complex Of A Chitinase With The Natural Product
Cyclopentapeptide Argadin From Clonostachys
pdb|1H0I|A Chain A, Complex Of A Chitinase With The Natural Product
Cyclopentapeptide Argifin From Gliocladium
pdb|1H0I|B Chain B, Complex Of A Chitinase With The Natural Product
Cyclopentapeptide Argifin From Gliocladium
Length = 499
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 157/392 (40%), Gaps = 79/392 (20%)
Query: 37 VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTV------KKKNPSI 90
VS I+ TH+ S DINS L + N AK D V K NPS+
Sbjct: 33 VSNITPAKAKQLTHINFSFLDINSN---LECAWDPATND-AKARDVVNRLTALKAHNPSL 88
Query: 91 TTILSIGQGKDTN-----YSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT 145
+ SIG +N ++ Y + V+ + R F S +RI + YGF G+D W P
Sbjct: 89 RIMFSIGGWYYSNDLGVSHANYVNAVKTPASRTKFAQSCVRIMKDYGFDGVDIDWEYPQA 148
Query: 146 S-TDMFNIGLLFDEWRI---AATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRN 201
+ D F L E R T D + + Q L I A + L I
Sbjct: 149 AEVDGFIAAL--QEIRTLLNQQTITDGRQALPYQ-LTIAGAGGAFFLSRYYSKLAQIVAP 205
Query: 202 LNWIHAVT---ASYYEPVSTNFTAPPAALYGSISG------------------------- 233
L++I+ +T A +E V+ + AAL+G +G
Sbjct: 206 LDYINLMTYDLAGPWEKVTNH----QAALFGDAAGPTFYNALREANLGWSWEELTRAFPS 261
Query: 234 RFARSTD-QVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPAL------ 286
F+ + D V + + G+ + K+VM +PFYG A+ V + G ++ + P
Sbjct: 262 PFSLTVDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPST 321
Query: 287 -------------YDSGLVTYKKIKNHIK-TYGPDVQVMYNSTYEVNYF--STGTVWFGF 330
D + +Y++++ ++ YG Q ++N + Y + ++ +
Sbjct: 322 DYWLVGCEECVRDKDPRIASYRQLEQMLQGNYG--YQRLWNDKTKTPYLYHAQNGLFVTY 379
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD 362
DD E+ + K Y K+++L G W + D+ +
Sbjct: 380 DDAESFKYKAKYIKQQQLGGVMFWHLGQDNRN 411
>pdb|1E6N|B Chain B, Chitinase B From Serratia Marcescens Inactive Mutant E144q
In Complex With N-Acetylglucosamine-Pentamer
pdb|1E6P|A Chain A, Chitinase B From Serratia Marcescens Inactive Mutant E144q
pdb|1E6P|B Chain B, Chitinase B From Serratia Marcescens Inactive Mutant E144q
pdb|1E6N|A Chain A, Chitinase B From Serratia Marcescens Inactive Mutant E144q
In Complex With N-Acetylglucosamine-Pentamer
Length = 499
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 157/392 (40%), Gaps = 79/392 (20%)
Query: 37 VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTV------KKKNPSI 90
VS I+ TH+ S DINS L + N AK D V K NPS+
Sbjct: 33 VSNITPAKAKQLTHINFSFLDINSN---LECAWDPATND-AKARDVVNRLTALKAHNPSL 88
Query: 91 TTILSIGQGKDTN-----YSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT 145
+ SIG +N ++ Y + V+ + R F S +RI + YGF G+D W P
Sbjct: 89 RIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVDIDWQYPQA 148
Query: 146 S-TDMFNIGLLFDEWRI---AATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRN 201
+ D F L E R T D + + Q L I A + L I
Sbjct: 149 AEVDGFIAAL--QEIRTLLNQQTITDGRQALPYQ-LTIAGAGGAFFLSRYYSKLAQIVAP 205
Query: 202 LNWIHAVT---ASYYEPVSTNFTAPPAALYGSISG------------------------- 233
L++I+ +T A +E V+ + AAL+G +G
Sbjct: 206 LDYINLMTYDLAGPWEKVTNH----QAALFGDAAGPTFYNALREANLGWSWEELTRAFPS 261
Query: 234 RFARSTD-QVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPAL------ 286
F+ + D V + + G+ + K+VM +PFYG A+ V + G ++ + P
Sbjct: 262 PFSLTVDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPST 321
Query: 287 -------------YDSGLVTYKKIKNHIK-TYGPDVQVMYNSTYEVNYF--STGTVWFGF 330
D + +Y++++ ++ YG Q ++N + Y + ++ +
Sbjct: 322 DYWLVGCEECVRDKDPRIASYRQLEQMLQGNYG--YQRLWNDKTKTPYLYHAQNGLFVTY 379
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD 362
DD E+ + K Y K+++L G W + D+ +
Sbjct: 380 DDAESFKYKAKYIKQQQLGGVMFWHLGQDNRN 411
>pdb|1E15|A Chain A, Chitinase B From Serratia Marcescens
pdb|1E15|B Chain B, Chitinase B From Serratia Marcescens
pdb|1E6R|A Chain A, Chitinase B From Serratia Marcescens Wildtype In Complex
With Inhibitor Allosamidin
pdb|1E6R|B Chain B, Chitinase B From Serratia Marcescens Wildtype In Complex
With Inhibitor Allosamidin
pdb|1GPF|A Chain A, Chitinase B From Serratia Marcescens In Complex With
Inhibitor Psammaplin
pdb|1GPF|B Chain B, Chitinase B From Serratia Marcescens In Complex With
Inhibitor Psammaplin
pdb|1UR8|A Chain A, Interactions Of A Family 18 Chitinase With The Designed
Inhibitor Hm508, And Its Degradation Product,
Chitobiono-Delta-Lactone
pdb|1UR8|B Chain B, Interactions Of A Family 18 Chitinase With The Designed
Inhibitor Hm508, And Its Degradation Product,
Chitobiono-Delta-Lactone
pdb|1W1P|A Chain A, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(Gly-L-Pro) At
2.1 A Resolution
pdb|1W1P|B Chain B, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(Gly-L-Pro) At
2.1 A Resolution
pdb|1W1T|A Chain A, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(his-l-pro) At
1.9 A Resolution
pdb|1W1T|B Chain B, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(his-l-pro) At
1.9 A Resolution
pdb|1W1V|A Chain A, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(L-Arg-L-Pro)
At 1.85 A Resolution
pdb|1W1V|B Chain B, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(L-Arg-L-Pro)
At 1.85 A Resolution
pdb|1W1Y|A Chain A, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(l-tyr-l-pro)
At 1.85 A Resolution
pdb|1W1Y|B Chain B, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(l-tyr-l-pro)
At 1.85 A Resolution
pdb|1O6I|A Chain A, Chitinase B From Serratia Marcescens Complexed With The
Catalytic Intermediate Mimic Cyclic Dipeptide Ci4.
pdb|1O6I|B Chain B, Chitinase B From Serratia Marcescens Complexed With The
Catalytic Intermediate Mimic Cyclic Dipeptide Ci4
Length = 499
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 157/392 (40%), Gaps = 79/392 (20%)
Query: 37 VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTV------KKKNPSI 90
VS I+ TH+ S DINS L + N AK D V K NPS+
Sbjct: 33 VSNITPAKAKQLTHINFSFLDINSN---LECAWDPATND-AKARDVVNRLTALKAHNPSL 88
Query: 91 TTILSIGQGKDTN-----YSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT 145
+ SIG +N ++ Y + V+ + R F S +RI + YGF G+D W P
Sbjct: 89 RIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVDIDWEYPQA 148
Query: 146 S-TDMFNIGLLFDEWRI---AATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRN 201
+ D F L E R T D + + Q L I A + L I
Sbjct: 149 AEVDGFIAAL--QEIRTLLNQQTITDGRQALPYQ-LTIAGAGGAFFLSRYYSKLAQIVAP 205
Query: 202 LNWIHAVT---ASYYEPVSTNFTAPPAALYGSISG------------------------- 233
L++I+ +T A +E V+ + AAL+G +G
Sbjct: 206 LDYINLMTYDLAGPWEKVTNH----QAALFGDAAGPTFYNALREANLGWSWEELTRAFPS 261
Query: 234 RFARSTD-QVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPAL------ 286
F+ + D V + + G+ + K+VM +PFYG A+ V + G ++ + P
Sbjct: 262 PFSLTVDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPST 321
Query: 287 -------------YDSGLVTYKKIKNHIK-TYGPDVQVMYNSTYEVNYF--STGTVWFGF 330
D + +Y++++ ++ YG Q ++N + Y + ++ +
Sbjct: 322 DYWLVGCEECVRDKDPRIASYRQLEQMLQGNYG--YQRLWNDKTKTPYLYHAQNGLFVTY 379
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD 362
DD E+ + K Y K+++L G W + D+ +
Sbjct: 380 DDAESFKYKAKYIKQQQLGGVMFWHLGQDNRN 411
>pdb|1OGB|A Chain A, Chitinase B From Serratia Marcescens Mutant D142n
pdb|1OGB|B Chain B, Chitinase B From Serratia Marcescens Mutant D142n
pdb|1OGG|A Chain A, Chitinase B From Serratia Marcescens Mutant D142n In
Complex With Inhibitor Allosamidin
pdb|1OGG|B Chain B, Chitinase B From Serratia Marcescens Mutant D142n In
Complex With Inhibitor Allosamidin
Length = 499
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 157/392 (40%), Gaps = 79/392 (20%)
Query: 37 VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTV------KKKNPSI 90
VS I+ TH+ S DINS L + N AK D V K NPS+
Sbjct: 33 VSNITPAKAKQLTHINFSFLDINSN---LECAWDPATND-AKARDVVNRLTALKAHNPSL 88
Query: 91 TTILSIGQGKDTN-----YSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT 145
+ SIG +N ++ Y + V+ + R F S +RI + YGF G+D W P
Sbjct: 89 RIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVDINWEYPQA 148
Query: 146 S-TDMFNIGLLFDEWRI---AATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRN 201
+ D F L E R T D + + Q L I A + L I
Sbjct: 149 AEVDGFIAAL--QEIRTLLNQQTITDGRQALPYQ-LTIAGAGGAFFLSRYYSKLAQIVAP 205
Query: 202 LNWIHAVT---ASYYEPVSTNFTAPPAALYGSISG------------------------- 233
L++I+ +T A +E V+ + AAL+G +G
Sbjct: 206 LDYINLMTYDLAGPWEKVTNH----QAALFGDAAGPTFYNALREANLGWSWEELTRAFPS 261
Query: 234 RFARSTD-QVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPAL------ 286
F+ + D V + + G+ + K+VM +PFYG A+ V + G ++ + P
Sbjct: 262 PFSLTVDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPST 321
Query: 287 -------------YDSGLVTYKKIKNHIK-TYGPDVQVMYNSTYEVNYF--STGTVWFGF 330
D + +Y++++ ++ YG Q ++N + Y + ++ +
Sbjct: 322 DYWLVGCEECVRDKDPRIASYRQLEQMLQGNYG--YQRLWNDKTKTPYLYHAQNGLFVTY 379
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD 362
DD E+ + K Y K+++L G W + D+ +
Sbjct: 380 DDAESFKYKAKYIKQQQLGGVMFWHLGQDNRN 411
>pdb|1E6Z|A Chain A, Chitinase B From Serratia Marcescens Wildtype In Complex
With Catalytic Intermediate
pdb|1E6Z|B Chain B, Chitinase B From Serratia Marcescens Wildtype In Complex
With Catalytic Intermediate
Length = 498
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 157/392 (40%), Gaps = 79/392 (20%)
Query: 37 VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTV------KKKNPSI 90
VS I+ TH+ S DINS L + N AK D V K NPS+
Sbjct: 32 VSNITPAKAKQLTHINFSFLDINSN---LECAWDPATND-AKARDVVNRLTALKAHNPSL 87
Query: 91 TTILSIGQGKDTN-----YSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT 145
+ SIG +N ++ Y + V+ + R F S +RI + YGF G+D W P
Sbjct: 88 RIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVDIDWEYPQA 147
Query: 146 S-TDMFNIGLLFDEWRI---AATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRN 201
+ D F L E R T D + + Q L I A + L I
Sbjct: 148 AEVDGFIAAL--QEIRTLLNQQTITDGRQALPYQ-LTIAGAGGAFFLSRYYSKLAQIVAP 204
Query: 202 LNWIHAVT---ASYYEPVSTNFTAPPAALYGSISG------------------------- 233
L++I+ +T A +E V+ + AAL+G +G
Sbjct: 205 LDYINLMTYDLAGPWEKVTNH----QAALFGDAAGPTFYNALREANLGWSWEELTRAFPS 260
Query: 234 RFARSTD-QVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPAL------ 286
F+ + D V + + G+ + K+VM +PFYG A+ V + G ++ + P
Sbjct: 261 PFSLTVDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPST 320
Query: 287 -------------YDSGLVTYKKIKNHIK-TYGPDVQVMYNSTYEVNYF--STGTVWFGF 330
D + +Y++++ ++ YG Q ++N + Y + ++ +
Sbjct: 321 DYWLVGCEECVRDKDPRIASYRQLEQMLQGNYG--YQRLWNDKTKTPYLYHAQNGLFVTY 378
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD 362
DD E+ + K Y K+++L G W + D+ +
Sbjct: 379 DDAESFKYKAKYIKQQQLGGVMFWHLGQDNRN 410
>pdb|3B9A|A Chain A, Crystal Structure Of Vibrio Harveyi Chitinase A Complexed
With Hexasaccharide
pdb|3B9D|A Chain A, Crystal Structure Of Vibrio Harveyi Chitinase A Complexed
With Pentasaccharide
pdb|3B9E|A Chain A, Crystal Structure Of Inactive Mutant E315m Chitinase A
From Vibrio Harveyi
Length = 584
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 136/333 (40%), Gaps = 62/333 (18%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
+K++NP + I SIG G + Y + + +R +F+ S + + + F G+D W
Sbjct: 238 LKQRNPDLKIIPSIG-GWTLSDPFYDFV--DKKNRDTFVASVKKFLKTWKFYDGVDIDWM 294
Query: 142 APNTST------DMFNIG----LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPAN 191
P D N G L E R+ +L+A+ T + L Y +
Sbjct: 295 FPGGGGAAADKGDPVNDGPAYIALMRELRVMLDELEAE--TGRTYELTSAIGVGYDKIED 352
Query: 192 SYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFAR-------------- 237
+++Q +++I A+T +Y + N ALY G F R
Sbjct: 353 VDYADAVQY-MDYIFAMTYDFYGGWN-NVPGHQTALY---CGSFMRPGQCDGGGVDENGE 407
Query: 238 -------STDQVLKAWIERGLSADKLVMCLPFYGYAW------TLVKPEDNGIGAAAA-- 282
+ D ++ + +G+ A+KLV+ YG W TL P D G A
Sbjct: 408 PYKGPAYTADNGIQLLLAQGVPANKLVLGTAMYGRGWEGVTPDTLTDPNDPMTGTATGKL 467
Query: 283 ----GPALYDSGLVTYKKIKNHI----KTYGPDVQVMYNSTYEVNYF---STGTVWFGFD 331
+++ G++ YK IK+ + T + Y++ E + STG + FD
Sbjct: 468 KGSTAQGVWEDGVIDYKGIKSFMLGANNTGINGFEYGYDAQAEAPWVWNRSTGEL-ITFD 526
Query: 332 DVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWL 364
D +V AK YAK L G ++W++ D+ D L
Sbjct: 527 DHRSVLAKGNYAKSLGLAGLFSWEIDADNGDIL 559
>pdb|3B8S|A Chain A, Crystal Structure Of Wild-Type Chitinase A From Vibrio
Harveyi
pdb|3B8S|B Chain B, Crystal Structure Of Wild-Type Chitinase A From Vibrio
Harveyi
pdb|3ARO|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Apo Structure
pdb|3ARP|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
Dequalinium
pdb|3ARQ|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
Idarubicin
pdb|3ARR|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
Pentoxifylline
pdb|3ARV|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
Sanguinarine
pdb|3ARW|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
Chelerythrine
pdb|3ARX|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
Propentofylline
pdb|3ARY|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
2-(Imidazolin-2-Yl)-5- Isothiocyanatobenzofuran
pdb|3ARZ|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
2-(Imidazolin-2-Yl)-5- Isothiocyanatobenzofuran
Length = 584
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 136/333 (40%), Gaps = 62/333 (18%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
+K++NP + I SIG G + Y + + +R +F+ S + + + F G+D W
Sbjct: 238 LKQRNPDLKIIPSIG-GWTLSDPFYDFV--DKKNRDTFVASVKKFLKTWKFYDGVDIDWE 294
Query: 142 APNTST------DMFNIG----LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPAN 191
P D N G L E R+ +L+A+ T + L Y +
Sbjct: 295 FPGGGGAAADKGDPVNDGPAYIALMRELRVMLDELEAE--TGRTYELTSAIGVGYDKIED 352
Query: 192 SYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFAR-------------- 237
+++Q +++I A+T +Y + N ALY G F R
Sbjct: 353 VDYADAVQY-MDYIFAMTYDFYGGWN-NVPGHQTALY---CGSFMRPGQCDGGGVDENGE 407
Query: 238 -------STDQVLKAWIERGLSADKLVMCLPFYGYAW------TLVKPEDNGIGAAAA-- 282
+ D ++ + +G+ A+KLV+ YG W TL P D G A
Sbjct: 408 PYKGPAYTADNGIQLLLAQGVPANKLVLGTAMYGRGWEGVTPDTLTDPNDPMTGTATGKL 467
Query: 283 ----GPALYDSGLVTYKKIKNHI----KTYGPDVQVMYNSTYEVNYF---STGTVWFGFD 331
+++ G++ YK IK+ + T + Y++ E + STG + FD
Sbjct: 468 KGSTAQGVWEDGVIDYKGIKSFMLGANNTGINGFEYGYDAQAEAPWVWNRSTGEL-ITFD 526
Query: 332 DVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWL 364
D +V AK YAK L G ++W++ D+ D L
Sbjct: 527 DHRSVLAKGNYAKSLGLAGLFSWEIDADNGDIL 559
>pdb|1GOI|A Chain A, Crystal Structure Of The D140n Mutant Of Chitinase B From
Serratia Marcescens At 1.45 A Resolution
pdb|1GOI|B Chain B, Crystal Structure Of The D140n Mutant Of Chitinase B From
Serratia Marcescens At 1.45 A Resolution
Length = 499
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 157/392 (40%), Gaps = 79/392 (20%)
Query: 37 VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTV------KKKNPSI 90
VS I+ TH+ S DINS L + N AK D V K NPS+
Sbjct: 33 VSNITPAKAKQLTHINFSFLDINSN---LECAWDPATND-AKARDVVNRLTALKAHNPSL 88
Query: 91 TTILSIGQGKDTN-----YSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT 145
+ SIG +N ++ Y + V+ + R F S +RI + YGF G++ W P
Sbjct: 89 RIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVNIDWEYPQA 148
Query: 146 S-TDMFNIGLLFDEWRI---AATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRN 201
+ D F L E R T D + + Q L I A + L I
Sbjct: 149 AEVDGFIAAL--QEIRTLLNQQTITDGRQALPYQ-LTIAGAGGAFFLSRYYSKLAQIVAP 205
Query: 202 LNWIHAVT---ASYYEPVSTNFTAPPAALYGSISG------------------------- 233
L++I+ +T A +E V+ + AAL+G +G
Sbjct: 206 LDYINLMTYDLAGPWEKVTNH----QAALFGDAAGPTFYNALREANLGWSWEELTRAFPS 261
Query: 234 RFARSTD-QVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPAL------ 286
F+ + D V + + G+ + K+VM +PFYG A+ V + G ++ + P
Sbjct: 262 PFSLTVDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPST 321
Query: 287 -------------YDSGLVTYKKIKNHIK-TYGPDVQVMYNSTYEVNYF--STGTVWFGF 330
D + +Y++++ ++ YG Q ++N + Y + ++ +
Sbjct: 322 DYWLVGCEECVRDKDPRIASYRQLEQMLQGNYG--YQRLWNDKTKTPYLYHAQNGLFVTY 379
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD 362
DD E+ + K Y K+++L G W + D+ +
Sbjct: 380 DDAESFKYKAKYIKQQQLGGVMFWHLGQDNRN 411
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLT 514
SL E ++++KLG G YG VY+GV + K K T EEF E +
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 61
Query: 515 AKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
+++H NL+++LG C +I E+M +L YL + Q+
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV 106
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++
Sbjct: 222 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 281
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
LG C +I E+M +L YL + Q+
Sbjct: 282 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 315
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 468 IRNKLGEGGYGPVY----KGVLPCGE--VIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
++ +LGEG +G V+ +LP + ++AVK L + S ++F+ E L LQH +
Sbjct: 16 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 75
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
++R G C + ++++EYM + L+ +L
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFL 105
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 468 IRNKLGEGGYGPVY----KGVLPCGE--VIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
++ +LGEG +G V+ +LP + ++AVK L + S ++F+ E L LQH +
Sbjct: 22 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 81
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
++R G C + ++++EYM + L+ +L
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFL 111
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLT 514
SL E ++++KLG G YG VY+GV + K K T EEF E +
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 61
Query: 515 AKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
+++H NL+++LG C +I E+M +L YL + Q+
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 106
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++
Sbjct: 219 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 278
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
LG C +I E+M +L YL + Q+
Sbjct: 279 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 312
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++L
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
G C +I E+M +L YL + Q+
Sbjct: 81 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV 113
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 468 IRNKLGEGGYGPVY----KGVLPCGE--VIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
++ +LGEG +G V+ +LP + ++AVK L + S ++F+ E L LQH +
Sbjct: 45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 104
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
++R G C + ++++EYM + L+ +L
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFL 134
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++
Sbjct: 261 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 320
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
LG C +I E+M +L YL + Q+
Sbjct: 321 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 354
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++
Sbjct: 15 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
LG C +I E+M +L YL + Q+
Sbjct: 75 LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV 108
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++L
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
G C +I E+M +L YL + Q+
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 113
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++
Sbjct: 20 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 79
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
LG C +I E+M +L YL + Q+
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 113
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++L
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
G C +I E+M +L YL + Q+
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 108
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++
Sbjct: 16 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 75
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
LG C +I E+M +L YL + Q+
Sbjct: 76 LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV 109
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++
Sbjct: 15 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
LG C +I E+M +L YL + Q+
Sbjct: 75 LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV 108
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++L
Sbjct: 20 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 79
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
G C +I E+M +L YL + Q+
Sbjct: 80 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 112
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++L
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
G C +I E+M +L YL + Q+
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 108
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++
Sbjct: 20 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 79
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
LG C +I E+M +L YL + Q+
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 113
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++
Sbjct: 17 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 76
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
LG C +I E+M +L YL + Q+
Sbjct: 77 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 110
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++
Sbjct: 15 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
LG C +I E+M +L YL + Q+
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 108
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++L
Sbjct: 29 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 88
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
G C +I E+M +L YL + Q+
Sbjct: 89 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 121
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++
Sbjct: 20 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 79
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
LG C +I E+M +L YL + Q+
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 113
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++
Sbjct: 16 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 75
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
LG C +I E+M +L YL + Q+
Sbjct: 76 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 109
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++
Sbjct: 17 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 76
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
LG C +I E+M +L YL + Q+
Sbjct: 77 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 110
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++
Sbjct: 17 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 76
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
LG C +I E+M +L YL + Q+
Sbjct: 77 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 110
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++
Sbjct: 15 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
LG C +I E+M +L YL + Q+
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 108
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYL 551
G C + R LI EY+P SL YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 107
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYL 551
G C + R LI EY+P SL YL
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 135
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYL 551
G C + R LI EY+P SL YL
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 109
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYL 551
G C + R LI EY+P SL YL
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 110
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYL 551
G C + R LI EY+P SL YL
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 105
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYL 551
G C + R LI EY+P SL YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 107
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYL 551
G C + R LI EY+P SL YL
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 103
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYL 551
G C + R LI EY+P SL YL
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 111
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYL 551
G C + R LI EY+P SL YL
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 108
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYL 551
G C + R LI EY+P SL YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 104
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLT 514
SL E ++++KLG G +G VY+GV + K K T EEF E +
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 61
Query: 515 AKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKT 559
+++H NL+++LG C +I E+M +L YL + Q+
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 106
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYL 551
G C + R LI EY+P SL YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 104
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYL 551
G C + R LI EY+P SL YL
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 102
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYL 551
G C + R LI EY+P SL YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 104
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYL 551
G C + R LI EY+P SL YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 122
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYL 551
G C + R LI EY+P SL YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 122
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 468 IRNKLGEGGYGPVYKGVL--PCGE----VIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
++ +LGEG +G V+ C E ++AVK L S ++F E L LQH +
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
+++ G C++ + ++++EYM + L+ +L
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFL 106
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 7/86 (8%)
Query: 472 LGEGGYGPVYKGV-LPCGEVI----AVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE + A+K L++T+ + EF +E ++ A + H +L+R+
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYL 551
LG C+ S L+ + MP+ L Y+
Sbjct: 83 LGVCL-SPTIQLVTQLMPHGCLLEYV 107
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 7/86 (8%)
Query: 472 LGEGGYGPVYKGV-LPCGEVI----AVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE + A+K L++T+ + EF +E ++ A + H +L+R+
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYL 551
LG C+ S L+ + MP+ L Y+
Sbjct: 106 LGVCL-SPTIQLVTQLMPHGCLLEYV 130
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 471 KLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 526 LGFCIDSEER--MLIYEYMPNKSLDCYL 551
G C + R LI E++P SL YL
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYL 107
>pdb|1KFW|A Chain A, Structure Of Catalytic Domain Of Psychrophilic Chitinase B
From Arthrobacter Tad20
Length = 435
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 124/317 (39%), Gaps = 59/317 (18%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSI------RIARLYG---- 132
+K KNP + ++S+G T +S + R+ + S I + G
Sbjct: 111 LKAKNPKLKVMISLGGW--TWSKNFSKAAATEASRQKLVSSCIDLYIKGNLPNFEGRGGA 168
Query: 133 ------FRGLDFAWTAPNTST-----------DMFNIGLLFDEWRIAATKLDAKNSTRQQ 175
F G+D W P T++ D N L E+R +LDA ST +
Sbjct: 169 GAAAGIFDGIDIDWEWPGTNSGLAGNGVDTVNDRANFKALLAEFR---KQLDAYGSTNNK 225
Query: 176 SLLILTARFRYSP----------PAN--SYLLNSIQR-NLNWIHAVTASYYEPVSTNFTA 222
+L+A +P PAN S SIQ +L+ T + ++ + A
Sbjct: 226 KY-VLSAFLPANPADIDAGGWDDPANFKSLDFGSIQGYDLHGAWNPTLTGHQANLYDDPA 284
Query: 223 PPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA 282
P A S +F S D+ +K ++ G+ +L + L YG WT K A
Sbjct: 285 DPRA----PSKKF--SADKAVKKYLAAGIDPKQLGLGLAAYGRGWTGAKNVSPWGPATDG 338
Query: 283 GPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAY 342
P Y++ Y K +KT G D Y++ + GT W+ +D++ + K Y
Sbjct: 339 APGTYETANEDYDK----LKTLGTD---HYDAATGSAWRYDGTQWWSYDNIATTKQKTDY 391
Query: 343 AKEKRLLGYYAWQVSFD 359
K L G W++S D
Sbjct: 392 IVSKGLGGGMWWELSGD 408
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGVL--PC-GE---VIAVKKLSKTSTQGF-EEFK 508
L +I + RF +LGE +G VYKG L P GE +A+K L + EEF+
Sbjct: 20 LKEISLSAVRFM--EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 77
Query: 509 NEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
+E ML A+LQH N++ +LG + +I+ Y + L +L
Sbjct: 78 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 120
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGVL--PC-GE---VIAVKKLSKTSTQGF-EEFK 508
L +I + RF +LGE +G VYKG L P GE +A+K L + EEF+
Sbjct: 3 LKEISLSAVRFM--EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 60
Query: 509 NEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
+E ML A+LQH N++ +LG + +I+ Y + L +L
Sbjct: 61 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 103
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 64/116 (55%), Gaps = 15/116 (12%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQG---- 503
P R+ +LAD E E+ ++G+GG+G V+KG L + V+A+K L ++G
Sbjct: 9 PKSRLPTLADNEIEYEK-----QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 504 ---FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSH 556
F+EF+ EV + + L H N++++ G + + RM++ E++P L L +H
Sbjct: 64 IEKFQEFQREVFIMSNLNHPNIVKLYGL-MHNPPRMVM-EFVPCGDLYHRLLDKAH 117
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 64/116 (55%), Gaps = 15/116 (12%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQG---- 503
P R+ +LAD E E+ ++G+GG+G V+KG L + V+A+K L ++G
Sbjct: 9 PKSRLPTLADNEIEYEK-----QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 504 ---FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSH 556
F+EF+ EV + + L H N++++ G + + RM++ E++P L L +H
Sbjct: 64 IEKFQEFQREVFIMSNLNHPNIVKLYGL-MHNPPRMVM-EFVPCGDLYHRLLDKAH 117
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 64/116 (55%), Gaps = 15/116 (12%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQG---- 503
P R+ +LAD E E+ ++G+GG+G V+KG L + V+A+K L ++G
Sbjct: 9 PKSRLPTLADNEIEYEK-----QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 504 ---FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSH 556
F+EF+ EV + + L H N++++ G + + RM++ E++P L L +H
Sbjct: 64 IEKFQEFQREVFIMSNLNHPNIVKLYGL-MHNPPRMVM-EFVPCGDLYHRLLDKAH 117
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 468 IRNKLGEGGYGPVYKG----VLPCGE--VIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
++ +LGEG +G V+ + P + ++AVK L + ++F+ E L LQH +
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
+++ G C D + ++++EYM + L+ +L
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFL 108
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-E 506
S++D+ E + ++ LG G +G VY+G + P +AVK L + ++ E +
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
F E ++ +KL H N++R +G + S R ++ E M L +L
Sbjct: 81 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 125
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-E 506
S++D+ E + ++ LG G +G VY+G + P +AVK L + ++ E +
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
F E ++ +KL H N++R +G + S R ++ E M L +L
Sbjct: 95 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 139
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 413 KYNQMKRLNLIEEDSAKASNTRANNETEAGDFNRNVPNL-RVYSLADI-EAATERFSIRN 470
K+ +++ + + E S + ++ T D+N N + S++D+ E + ++
Sbjct: 5 KHQELQAMQM-ELQSPEYKLSKLRTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIR 63
Query: 471 KLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-EFKNEVMLTAKLQHVNLI 523
LG G +G VY+G + P +AVK L + ++ E +F E ++ +K H N++
Sbjct: 64 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 123
Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYL 551
R +G + S R ++ E M L +L
Sbjct: 124 RCIGVSLQSLPRFILLELMAGGDLKSFL 151
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-E 506
S++D+ E + ++ LG G +G VY+G + P +AVK L + ++ E +
Sbjct: 27 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 86
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
F E ++ +K H N++R +G + S R ++ E M L +L
Sbjct: 87 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 131
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-E 506
S++D+ E + ++ LG G +G VY+G + P +AVK L + ++ E +
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
F E ++ +K H N++R +G + S R ++ E M L +L
Sbjct: 81 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 125
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-E 506
S++D+ E + ++ LG G +G VY+G + P +AVK L + ++ E +
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
F E ++ +K H N++R +G + S R ++ E M L +L
Sbjct: 81 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 125
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-E 506
S++D+ E + ++ LG G +G VY+G + P +AVK L + ++ E +
Sbjct: 12 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 71
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
F E ++ +K H N++R +G + S R ++ E M L +L
Sbjct: 72 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 116
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-E 506
S++D+ E + ++ LG G +G VY+G + P +AVK L + ++ E +
Sbjct: 61 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 120
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
F E ++ +K H N++R +G + S R ++ E M L +L
Sbjct: 121 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 165
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-E 506
S++D+ E + ++ LG G +G VY+G + P +AVK L + ++ E +
Sbjct: 38 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 97
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
F E ++ +K H N++R +G + S R ++ E M L +L
Sbjct: 98 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 142
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-E 506
S++D+ E + ++ LG G +G VY+G + P +AVK L + ++ E +
Sbjct: 37 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 96
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
F E ++ +K H N++R +G + S R ++ E M L +L
Sbjct: 97 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 141
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-E 506
S++D+ E + ++ LG G +G VY+G + P +AVK L + ++ E +
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
F E ++ +K H N++R +G + S R ++ E M L +L
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL 139
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-E 506
S++D+ E + ++ LG G +G VY+G + P +AVK L + ++ E +
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
F E ++ +K H N++R +G + S R ++ E M L +L
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL 124
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 52/91 (57%), Gaps = 7/91 (7%)
Query: 472 LGEGGYGPVYK----GVLPCGE--VIAVKKLSKTSTQGFE-EFKNEVMLTAKLQHVNLIR 524
+GEG +G V++ G+LP ++AVK L + ++ + +F+ E L A+ + N+++
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 525 VLGFCIDSEERMLIYEYMPNKSLDCYLFGLS 555
+LG C + L++EYM L+ +L +S
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMS 145
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-E 506
S++D+ E + ++ LG G +G VY+G + P +AVK L + ++ E +
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
F E ++ +K H N++R +G + S R ++ E M L +L
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 124
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 50/120 (41%), Gaps = 6/120 (5%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
P V+ A AT SI +G G +G V G L + KT G+ E
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGL 563
F E + + H N+IR+ G S+ M++ EYM N SLD +L Q T L
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 50/120 (41%), Gaps = 6/120 (5%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
P V+ A AT SI +G G +G V G L + KT G+ E
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGL 563
F E + + H N+IR+ G S+ M++ EYM N SLD +L Q T L
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 50/120 (41%), Gaps = 6/120 (5%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
P V+ A AT SI +G G +G V G L + KT G+ E
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGL 563
F E + + H N+IR+ G S+ M++ EYM N SLD +L Q T L
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
P V+ A AT SI +G G +G V G L + KT G+ E
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
F E + + H N+IR+ G S+ M++ EYM N SLD +L
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
P V+ A AT SI +G G +G V G L + KT G+ E
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
F E + + H N+IR+ G S+ M++ EYM N SLD +L
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 50/120 (41%), Gaps = 6/120 (5%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
P V+ A AT SI +G G +G V G L + KT G+ E
Sbjct: 29 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 87
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGL 563
F E + + H N+IR+ G S+ M++ EYM N SLD +L Q T L
Sbjct: 88 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 147
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
P V+ A AT SI +G G +G V G L + KT G+ E
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
F E + + H N+IR+ G S+ M++ EYM N SLD +L
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
P V+ A AT SI +G G +G V G L + KT G+ E
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
F E + + H N+IR+ G S+ M++ EYM N SLD +L
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKT-STQGFEE 506
S++D+ E + ++ LG G +G VY+G + P +AVK L + S Q +
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELD 94
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
F E ++ +K H N++R +G + S R ++ E M L +L
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 139
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
+IEA+ S R +G G +G VYKG + + K+ + + F+ F+NEV + K
Sbjct: 32 EIEASEVMLSTR--IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKT 89
Query: 518 QHVNLIRVLGF 528
+HVN++ +G+
Sbjct: 90 RHVNILLFMGY 100
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-----FKNEVMLTAKLQHV 520
SI +G G +G V G L + KT G+ E F E + + H
Sbjct: 18 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGL 563
N+IR+ G S+ M++ EYM N SLD +L Q T L
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 120
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 14/113 (12%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKL-----SKTSTQGFEEFKN 509
LA I TE ++ LG G +G V+KGV +P GE I + K+ Q F+ +
Sbjct: 6 LARIFKETELRKLKV-LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTD 64
Query: 510 EVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
++ L H +++R+LG C S + L+ +Y+P SL L H + + G
Sbjct: 65 HMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSL------LDHVRQHRG 110
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-----FKNEVMLTAKLQHV 520
SI +G G +G V G L + KT G+ E F E + + H
Sbjct: 35 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 94
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGL 563
N+IR+ G S+ M++ EYM N SLD +L Q T L
Sbjct: 95 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 137
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 14/113 (12%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKL-----SKTSTQGFEEFKN 509
LA I TE ++ LG G +G V+KGV +P GE I + K+ Q F+ +
Sbjct: 24 LARIFKETELRKLK-VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTD 82
Query: 510 EVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
++ L H +++R+LG C S + L+ +Y+P SL L H + + G
Sbjct: 83 HMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSL------LDHVRQHRG 128
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 8/109 (7%)
Query: 449 PNLRVYSLA-DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE- 506
PN V+ A +IEA+ +I +G G +G V G L + KT G+ E
Sbjct: 8 PNQAVHEFAKEIEASC--ITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEK 65
Query: 507 ----FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
F E + + H N+I + G S+ M++ EYM N SLD +L
Sbjct: 66 QRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFL 114
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 472 LGEGGYGPVYKGVLPCG----EV-IAVKKLSKTSTQGFE-EFKNEVMLTAKLQHVNLIRV 525
+G G +G VYKG+L EV +A+K L T+ +F E + + H N+IR+
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYL 551
G + M+I EYM N +LD +L
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFL 137
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCG----EVIAVKKLSKTSTQ-G 503
PN V A E I +G G +G V +G L +A+K L T+
Sbjct: 2 PNEAVREFAK-EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ 60
Query: 504 FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
EF +E + + +H N+IR+ G +S M++ E+M N +LD +L
Sbjct: 61 RREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL 108
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%)
Query: 443 DFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQ 502
D NR R S D E + ++ ++G G +G VYKG + + ++ + Q
Sbjct: 14 DRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQ 73
Query: 503 GFEEFKNEVMLTAKLQHVNLIRVLGF 528
+ FKNEV + K +HVN++ +G+
Sbjct: 74 QLQAFKNEVGVLRKTRHVNILLFMGY 99
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%)
Query: 443 DFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQ 502
D NR R S D E + ++ ++G G +G VYKG + + ++ + Q
Sbjct: 15 DRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQ 74
Query: 503 GFEEFKNEVMLTAKLQHVNLIRVLGF 528
+ FKNEV + K +HVN++ +G+
Sbjct: 75 QLQAFKNEVGVLRKTRHVNILLFMGY 100
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%)
Query: 443 DFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQ 502
D NR R S D E + ++ ++G G +G VYKG + + ++ + Q
Sbjct: 7 DRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQ 66
Query: 503 GFEEFKNEVMLTAKLQHVNLIRVLGF 528
+ FKNEV + K +HVN++ +G+
Sbjct: 67 QLQAFKNEVGVLRKTRHVNILLFMGY 92
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%)
Query: 443 DFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQ 502
D NR R S D E + ++ ++G G +G VYKG + + ++ + Q
Sbjct: 15 DRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQ 74
Query: 503 GFEEFKNEVMLTAKLQHVNLIRVLGF 528
+ FKNEV + K +HVN++ +G+
Sbjct: 75 QLQAFKNEVGVLRKTRHVNILLFMGY 100
>pdb|3QOK|A Chain A, Crystal Structure Of Putative Chitinase Ii From Klebsiella
Pneumoniae
Length = 420
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 118/317 (37%), Gaps = 32/317 (10%)
Query: 82 TVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWT 141
++K+NP + +LS+G +S + R FI S+ +I + YG G+D W
Sbjct: 100 ALRKQNPDLKVLLSVGGWGARGFS---GAAATAESRAVFIRSAQKIIQQYGLDGIDLDWE 156
Query: 142 APNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRN 201
P D A + + +Q L+ + P + + ++
Sbjct: 157 FPVNGAWGLVASQPADRDNFTALLKSLREAVGEQKLVTIAVGANAESPKSWVDVKAVAPV 216
Query: 202 LNWIHAVTASY-YEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCL 260
LN+I+ T Y N ++ + +++ S D V+ ++ GL + + +
Sbjct: 217 LNYINLXTYDXAYGTQYFNSNLYDSSHWPTVAAADKYSADFVVNNYLAAGLKPSQXNLGI 276
Query: 261 PFYGYA----------WTLVKPEDNGIGAAAAGP---AL-----YDSGLVTYKKIKNHIK 302
FYG WT ++N + GP AL YD TY K + +
Sbjct: 277 GFYGRVPKRAVEPGIDWTKADAQNNPVTQPYFGPQQIALFASLGYDLSKDTYVKYNDIVG 336
Query: 303 TYGPDVQVMYNSTYE----VNYFST----GTVWFG--FDDVEAVRAKIAYAKEKRLLGYY 352
D Q + ++ V + S G F +++ +V K Y K K L G
Sbjct: 337 KLLNDPQKRFTEHWDDEAKVPWLSVQSAEGKPLFALSYENPRSVAIKADYIKAKGLAGAX 396
Query: 353 AWQVSFDDHDWLLSQAA 369
W+ DD + L Q A
Sbjct: 397 FWEYGADDQNQLARQLA 413
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 468 IRNKLGEGGYGPVYKGVLPCG----EVIAVKKLSKTSTQ-GFEEFKNEVMLTAKLQHVNL 522
I +G G +G V +G L +A+K L T+ EF +E + + +H N+
Sbjct: 18 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
IR+ G +S M++ E+M N +LD +L
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDSFL 106
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 472 LGEGGYGPVYKGVLPCGE----VIAVK--KLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LGEG +G V +G L + +AVK KL +S + EEF +E H N+IR+
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 526 LGFCIDSEER-----MLIYEYMPNKSLDCYLF 552
LG CI+ + M+I +M L YL
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLL 133
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
+H N++R+ G+ DS LI EY P
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAP 91
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
D E + ++ ++G G +G VYKG + + ++ + Q + FKNEV + K
Sbjct: 7 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 66
Query: 518 QHVNLIRVLGF 528
+HVN++ +G+
Sbjct: 67 RHVNILLFMGY 77
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
D E + ++ ++G G +G VYKG + + ++ + Q + FKNEV + K
Sbjct: 4 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 63
Query: 518 QHVNLIRVLGF 528
+HVN++ +G+
Sbjct: 64 RHVNILLFMGY 74
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
D E + ++ ++G G +G VYKG + + ++ + Q + FKNEV + K
Sbjct: 7 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 66
Query: 518 QHVNLIRVLGF 528
+HVN++ +G+
Sbjct: 67 RHVNILLFMGY 77
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
D E + ++ ++G G +G VYKG + + ++ + Q + FKNEV + K
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 518 QHVNLIRVLGF 528
+HVN++ +G+
Sbjct: 62 RHVNILLFMGY 72
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
D E + ++ ++G G +G VYKG + + ++ + Q + FKNEV + K
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 518 QHVNLIRVLGF 528
+HVN++ +G+
Sbjct: 62 RHVNILLFMGY 72
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
D E + ++ ++G G +G VYKG + + ++ + Q + FKNEV + K
Sbjct: 6 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 65
Query: 518 QHVNLIRVLGF 528
+HVN++ +G+
Sbjct: 66 RHVNILLFMGY 76
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
D E + ++ ++G G +G VYKG + + ++ + Q + FKNEV + K
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 518 QHVNLIRVLGF 528
+HVN++ +G+
Sbjct: 62 RHVNILLFMGY 72
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
H N++++L + L++E++
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL 87
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
H N++++L + L++E++
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL 87
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
H N++++L + L++E++
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL 85
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 518
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 519 HVNLIRVLGFCIDSEERMLIYEYM 542
H N++++L + L++E++
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL 84
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
H N++++L + L++E++
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL 86
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
H N++++L + L++E++
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL 85
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 518
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 519 HVNLIRVLGFCIDSEERMLIYEYM 542
H N++++L + L++E++
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL 84
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
D E + ++ ++G G +G VYKG + + ++ + Q + FKNEV + K
Sbjct: 18 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 77
Query: 518 QHVNLIRVLGF 528
+HVN++ +G+
Sbjct: 78 RHVNILLFMGY 88
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
H N++++L + L++E++
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL 86
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
H N++++L + L++E++
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL 86
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 518
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 519 HVNLIRVLGFCIDSEERMLIYEYM 542
H N++++L + L++E++
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL 84
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
H N++++L + L++E++
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL 87
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
H N++++L + L++E++
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL 86
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
H N++++L + L++E++
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL 85
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
H N++++L + L++E++
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL 87
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
D E + ++ ++G G +G VYKG + + ++ + Q + FKNEV + K
Sbjct: 18 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 77
Query: 518 QHVNLIRVLGF 528
+HVN++ +G+
Sbjct: 78 RHVNILLFMGY 88
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 518
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 519 HVNLIRVLGFCIDSEERMLIYEYM 542
H N++++L + L++E++
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL 84
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 518
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 519 HVNLIRVLGFCIDSEERMLIYEYM 542
H N++++L + L++E++
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL 84
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 4 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
H N++++L + L++E++
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFL 88
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
H N++++L + L++E++
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL 87
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
H N++++L + L++E++
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL 85
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 521 NLIRVLGFCIDSEERMLIYEYM 542
N++++L + L++E++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL 84
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 521 NLIRVLGFCIDSEERMLIYEYM 542
N++++L + L++E++
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL 88
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 521 NLIRVLGFCIDSEERMLIYEYM 542
N++++L + L++E++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL 83
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 521 NLIRVLGFCIDSEERMLIYEYM 542
N++++L + L++E++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL 83
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTCSY 569
+H N++R+ G+ D+ LI EY P + L LS F ++T +Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK----FDEQRTATY 118
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 49/120 (40%), Gaps = 6/120 (5%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
P V+ A AT SI +G G +G V G L + KT G+ E
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGL 563
F E + + H N+IR+ G S+ M++ E M N SLD +L Q T L
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL 149
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 521 NLIRVLGFCIDSEERMLIYEYM 542
N++++L + L++E++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL 84
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 521 NLIRVLGFCIDSEERMLIYEYM 542
N++++L + L++E++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL 84
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 521 NLIRVLGFCIDSEERMLIYEYM 542
N++++L + L++E++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL 83
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 521 NLIRVLGFCIDSEERMLIYEYM 542
N++++L + L++E++
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL 91
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 521 NLIRVLGFCIDSEERMLIYEYM 542
N++++L + L++E++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL 83
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 521 NLIRVLGFCIDSEERMLIYEYM 542
N++++L + L++E++
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL 85
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTCSY 569
+H N++R+ G+ D+ LI EY P + L LS F ++T +Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK----FDEQRTATY 118
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 49/120 (40%), Gaps = 6/120 (5%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
P V+ A AT SI +G G +G V G L + KT G+ E
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGL 563
F E + + H N+IR+ G S+ M++ E M N SLD +L Q T L
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL 149
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 518
E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 1 GMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 519 HVNLIRVLGFCIDSEERMLIYEYM 542
H N++++L + L++E++
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL 84
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G +G V+ G +AVK L K T + F E L LQH
Sbjct: 9 EIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQH 67
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
L+R+ E +I EYM SL +L
Sbjct: 68 DKLVRLYAVVTREEPIYIITEYMAKGSLLDFL 99
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 521 NLIRVLGFCIDSEERMLIYEYM 542
N++++L + L++E++
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL 91
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 321
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFG 553
L+++ + + SEE + ++ EYM SL +L G
Sbjct: 322 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKG 354
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
+H N++R+ G+ D+ LI EY P
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP 92
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
++G G +G V+ G + +A+K + + E+F E + KL H L+++ G C
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 530 IDSEERMLIYEYMPNKSLDCYL---FGLSHQKTYFG-----------LEKTCSYH 570
++ L++E+M + L YL GL +T G LE+ C H
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 129
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKLQH 519
E F I LG+G +G VY + ++A+K L KT + G E + + EV + + L+H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 520 VNLIRVLGFCIDSEERMLIYEYMP 543
N++R+ G+ D+ LI EY P
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAP 95
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKLQH 519
E F I LG+G +G VY + ++A+K L KT + G E + + EV + + L+H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 520 VNLIRVLGFCIDSEERMLIYEYMP 543
N++R+ G+ D+ LI EY P
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAP 95
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
++G G +G V+ G + +A+K + + E+F E + KL H L+++ G C
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 530 IDSEERMLIYEYMPNKSLDCYL---FGLSHQKTYFGL 563
++ L++E+M + L YL GL +T G+
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGM 108
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG G +G V+ G +AVK L K T + F E L LQH
Sbjct: 8 EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQH 66
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
L+R+ E +I E+M SL +L
Sbjct: 67 DKLVRLYAVVTKEEPIYIITEFMAKGSLLDFL 98
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
+H N++R+ G+ D+ LI EY P
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP 91
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 238
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFG 553
L+++ + + SEE + ++ EYM SL +L G
Sbjct: 239 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKG 271
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
++G G +G V+ G + +A+K + + E+F E + KL H L+++ G C
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 530 IDSEERMLIYEYMPNKSLDCYL---FGLSHQKTYFG-----------LEKTCSYH 570
++ L++E+M + L YL GL +T G LE+ C H
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 126
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
+H N++R+ G+ D+ LI EY P
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP 96
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
+H N++R+ G+ D+ LI EY P
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAP 93
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
+H N++R+ G+ D+ LI EY P
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP 91
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 238
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFG 553
L+++ + + SEE + ++ EYM SL +L G
Sbjct: 239 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKG 271
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEV 511
L + A E F I LG+G +G VY + ++A+K L K + G E + + EV
Sbjct: 3 LGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 512 MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMP 543
+ + L+H N++R+ G+ D+ LI EY P
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAP 94
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-----FKNEVMLTAKLQHV 520
SI +G G +G V G L + KT G+ E F E + + H
Sbjct: 18 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGL 563
N+IR+ G S+ M++ E M N SLD +L Q T L
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL 120
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
+H N++R+ G+ D+ LI EY P
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP 96
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
++G G +G V+ G + +A+K + + E+F E + KL H L+++ G C
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 530 IDSEERMLIYEYMPNKSLDCYL---FGLSHQKTYFG-----------LEKTCSYH 570
++ L++E+M + L YL GL +T G LE+ C H
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 124
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
+H N++R+ G+ D+ LI EY P
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP 92
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
+H N++R+ G+ D+ LI EY P
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP 94
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
+H N++R+ G+ D+ LI EY P
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAP 90
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
+H N++R+ G+ D+ LI EY P
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP 92
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
+H N++R+ G+ D+ LI EY P
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP 94
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
+H N++R+ G+ D+ LI EY P
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP 91
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
+H N++R+ G+ D+ LI EY P
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAP 93
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
+H N++R+ G+ D+ LI EY P
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP 94
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
+H N++R+ G+ D+ LI EY P
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP 96
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
+H N++R+ G+ D+ LI EY P
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP 94
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 526 LGFCIDSEERMLIYEYMP 543
LG C+ S + LI + MP
Sbjct: 84 LGICLTSTVQ-LIMQLMP 100
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
H N++++L + L++E++
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHV 87
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
LG C+ S + LI + MP C L + K G
Sbjct: 87 LGICLTSTVQ-LIMQLMP---FGCLLDYVREHKDNIG 119
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
LG C+ S + LI + MP C L + K G
Sbjct: 84 LGICLTSTVQ-LIMQLMP---FGCLLDYVREHKDNIG 116
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
LG C+ S + LI + MP C L + K G
Sbjct: 85 LGICLTSTVQ-LIMQLMP---FGCLLDYVREHKDNIG 117
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
+H N++R+ G+ D+ LI EY P
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP 91
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
+H N++R+ G+ D+ LI EY P
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAP 108
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
LG C+ S + LI + MP C L + K G
Sbjct: 87 LGICLTSTVQ-LIMQLMP---FGCLLDYVREHKDNIG 119
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
+H N++R+ G+ D+ LI EY P
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP 94
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
+H N++R+ G+ D+ LI EY P
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP 91
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
+H N++R+ G+ D+ LI EY P
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP 91
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
LG C+ S + LI + MP C L + K G
Sbjct: 83 LGICLTSTVQ-LIMQLMP---FGCLLDYVREHKDNIG 115
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
+H N++R+ G+ D+ LI EY P
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP 91
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
+H N++R+ G+ D+ LI EY P
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAP 95
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
LG C+ S + LI + MP C L + K G
Sbjct: 85 LGICLTSTVQ-LIMQLMP---FGCLLDYVREHKDNIG 117
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 521 NLIRVLGFCIDSEERMLIYEYM 542
N++++L + L++E++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHV 83
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
LG C+ S + LI + MP C L + K G
Sbjct: 86 LGICLTSTVQ-LIMQLMP---FGCLLDYVREHKDNIG 118
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
+H N++R+ G+ D+ LI EY P
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAP 117
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 526 LGFCIDSEERMLIYEYMP 543
LG C+ S + LI + MP
Sbjct: 85 LGICLTSTVQ-LIMQLMP 101
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
++G G +G V+ G + +A+K + K + ++F E + KL H L+++ G C
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDKVAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 530 IDSEERMLIYEYMPNKSLDCYL---FGLSHQKTYFG-----------LEKTCSYH 570
++ L++E+M + L YL GL +T G LE+ C H
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 146
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 16/108 (14%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKL--SKTSTQGFE-EFKNEVMLTAKLQHVN 521
F I LG+G +G VY ++A+K L S+ +G E + + E+ + A L H N
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPN 84
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTCSY 569
++R+ + D LI EY P L Y L+K+C++
Sbjct: 85 ILRLYNYFYDRRRIYLILEYAPRGEL------------YKELQKSCTF 120
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 238
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFG 553
L+++ + + SEE + ++ EYM SL +L G
Sbjct: 239 EKLVQL--YAVVSEEPIYIVGEYMSKGSLLDFLKG 271
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
+H N++R+ G+ D+ LI EY P
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAP 117
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
LG C+ S + LI + MP C L + K G
Sbjct: 93 LGICLTSTVQ-LITQLMP---FGCLLDYVREHKDNIG 125
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 526 LGFCIDSEERMLIYEYMP 543
LG C+ S + LI + MP
Sbjct: 89 LGICLTSTVQ-LITQLMP 105
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
LG C+ S + LI + MP C L + K G
Sbjct: 83 LGICLTSTVQ-LITQLMP---FGCLLDYVREHKDNIG 115
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 465 RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKL---SKTSTQGFEEFKNEVMLTAKLQHV 520
++ + KLG+G YG V+K + GEV+AVKK+ + ST F+ ++LT H
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 521 NLIRVLGFCIDSEER--MLIYEYM 542
N++ +L +R L+++YM
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYM 93
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 526 LGFCIDSEERMLIYEYMP 543
LG C+ S + LI + MP
Sbjct: 83 LGICLTSTVQ-LITQLMP 99
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
LG C+ S + LI + MP C L + K G
Sbjct: 85 LGICLTSTVQ-LITQLMP---FGCLLDYVREHKDNIG 117
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP 543
+H N++R+ G+ D+ LI EY P
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAP 88
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFG 553
L+++ + + SEE + ++ EYM SL +L G
Sbjct: 73 EKLVQL--YAVVSEEPIYIVIEYMSKGSLLDFLKG 105
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 526 LGFCIDSEERMLIYEYMP 543
LG C+ S + LI + MP
Sbjct: 77 LGICLTSTVQ-LITQLMP 93
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSK-TSTQGF 504
VY + E A E+ ++ +LG+G +G VY+GV G V +A+K +++ S +
Sbjct: 36 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRER 94
Query: 505 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQ 557
EF NE + + +++R+LG + ++I E M L YL L +
Sbjct: 95 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 147
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFG 553
L+++ + + SEE + ++ EYM SL +L G
Sbjct: 73 EKLVQL--YAVVSEEPIYIVIEYMSKGSLLDFLKG 105
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
LG C+ S + LI + MP C L + K G
Sbjct: 86 LGICLTSTVQ-LITQLMP---FGCLLDYVREHKDNIG 118
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
LG C+ S + LI + MP C L + K G
Sbjct: 90 LGICLTSTVQ-LITQLMP---FGCLLDYVREHKDNIG 122
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 526 LGFCIDSEERMLIYEYMP 543
LG C+ S + LI + MP
Sbjct: 83 LGICLTSTVQ-LITQLMP 99
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 526 LGFCIDSEERMLIYEYMP 543
LG C+ S + LI + MP
Sbjct: 108 LGICLTSTVQ-LITQLMP 124
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSK-TSTQGF 504
VY + E A E+ ++ +LG+G +G VY+GV G V +A+K +++ S +
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRER 66
Query: 505 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQ 557
EF NE + + +++R+LG + ++I E M L YL L +
Sbjct: 67 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 119
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSKTSTQGFE 505
VY + E A E+ ++ +LG+G +G VY+GV G V +A+K +++ ++
Sbjct: 4 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRER 62
Query: 506 -EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGL 554
EF NE + + +++R+LG + ++I E M L YL L
Sbjct: 63 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL 112
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSK-TSTQGF 504
VY + E A E+ ++ +LG+G +G VY+GV G V +A+K +++ S +
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRER 65
Query: 505 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQ 557
EF NE + + +++R+LG + ++I E M L YL L +
Sbjct: 66 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 118
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 526 LGFCIDSEERMLIYEYMP 543
LG C+ S + LI + MP
Sbjct: 86 LGICLTSTVQ-LITQLMP 102
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 526 LGFCIDSEERMLIYEYMP 543
LG C+ S + LI + MP
Sbjct: 86 LGICLTSTVQ-LITQLMP 102
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
LG C+ S + LI + MP C L + K G
Sbjct: 90 LGICLTSTVQ-LITQLMP---FGCLLDYVREHKDNIG 122
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 526 LGFCIDSEERMLIYEYMP 543
LG C+ S + LI + MP
Sbjct: 85 LGICLTSTVQ-LITQLMP 101
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 526 LGFCIDSEERMLIYEYMP 543
LG C+ S + LI + MP
Sbjct: 80 LGICLTSTVQ-LITQLMP 96
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSK-TSTQGF 504
VY + E A E+ ++ +LG+G +G VY+GV G V +A+K +++ S +
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRER 65
Query: 505 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQ 557
EF NE + + +++R+LG + ++I E M L YL L +
Sbjct: 66 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 118
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFG 553
L+++ + + SEE + ++ EYM SL +L G
Sbjct: 73 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKG 105
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSKTSTQGFE 505
VY + E A E+ ++ +LG+G +G VY+GV G V +A+K +++ ++
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRER 66
Query: 506 -EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQ 557
EF NE + + +++R+LG + ++I E M L YL L +
Sbjct: 67 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 119
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSKTSTQGFE 505
VY + E A E+ ++ +LG+G +G VY+GV G V +A+K +++ ++
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRER 72
Query: 506 -EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGL 554
EF NE + + +++R+LG + ++I E M L YL L
Sbjct: 73 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL 122
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFG 553
L+++ + + SEE + ++ EYM SL +L G
Sbjct: 73 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKG 105
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 7 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 65
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFG 553
L+++ + + SEE + ++ EYM SL +L G
Sbjct: 66 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKG 98
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSK-TSTQGF 504
VY + E A E+ ++ +LG+G +G VY+GV G V +A+K +++ S +
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRER 72
Query: 505 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQ 557
EF NE + + +++R+LG + ++I E M L YL L +
Sbjct: 73 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 125
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 3 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 61
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFG 553
L+++ + + SEE + ++ EYM SL +L G
Sbjct: 62 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKG 94
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSK-TSTQGF 504
VY + E A E+ ++ +LG+G +G VY+GV G V +A+K +++ S +
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRER 59
Query: 505 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQ 557
EF NE + + +++R+LG + ++I E M L YL L +
Sbjct: 60 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 112
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFG 553
L+++ + + SEE + ++ EYM SL +L G
Sbjct: 73 EKLVQL--YAVVSEEPIYIVCEYMSKGSLLDFLKG 105
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 526 LGFCIDSEERMLIYEYMP 543
LG C+ S + LI + MP
Sbjct: 83 LGICLTSTVQ-LITQLMP 99
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 5 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 63
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFG 553
L+++ + + SEE + ++ EYM SL +L G
Sbjct: 64 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKG 96
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 4 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 62
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFG 553
L+++ + + SEE + ++ EYM SL +L G
Sbjct: 63 EKLVQL--YAVVSEEPIXIVTEYMSKGSLLDFLKG 95
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G +G V+ G +AVK L K + + F E L +LQH
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 67
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
L+R+ + E +I EYM N SL +L
Sbjct: 68 QRLVRLYA-VVTQEPIYIITEYMENGSLVDFL 98
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPC-GE---VIAVKKLSKTSTQ-GFEEFKNEVM 512
+IEA+ R I +G G G V G L G+ +A+K L T+ +F +E
Sbjct: 45 EIEAS--RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEAS 102
Query: 513 LTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
+ + H N+IR+ G M++ EYM N SLD +L
Sbjct: 103 IMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL 141
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G +G V+ G +AVK L K + + F E L +LQH
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 73
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
L+R+ + E +I EYM N SL +L
Sbjct: 74 QRLVRLYA-VVTQEPIYIITEYMENGSLVDFL 104
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G +G V+ G +AVK L K + + F E L +LQH
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 67
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
L+R+ + E +I EYM N SL +L
Sbjct: 68 QRLVRLYA-VVTQEPIYIITEYMENGSLVDFL 98
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 1/123 (0%)
Query: 445 NRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGF 504
++N P+ E + + +LG G +G V G +A+K + K +
Sbjct: 5 SKNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSE 63
Query: 505 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLE 564
+EF E + L H L+++ G C +I EYM N L YL + H+ L
Sbjct: 64 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL 123
Query: 565 KTC 567
+ C
Sbjct: 124 EMC 126
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPC-GE---VIAVKKLSKTSTQ-GFEEFKNEVM 512
+IEA+ R I +G G G V G L G+ +A+K L T+ +F +E
Sbjct: 45 EIEAS--RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEAS 102
Query: 513 LTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
+ + H N+IR+ G M++ EYM N SLD +L
Sbjct: 103 IMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL 141
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G +G V+ G +AVK L K + + F E L +LQH
Sbjct: 10 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 68
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
L+R+ + E +I EYM N SL +L
Sbjct: 69 QRLVRLYA-VVTQEPIYIITEYMENGSLVDFL 99
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G +G V+ G +AVK L K + + F E L +LQH
Sbjct: 19 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 77
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
L+R+ + E +I EYM N SL +L
Sbjct: 78 QRLVRLYA-VVTQEPIYIITEYMENGSLVDFL 108
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G +G V+ G +AVK L K + + F E L +LQH
Sbjct: 14 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 72
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
L+R+ + E +I EYM N SL +L
Sbjct: 73 QRLVRLYA-VVTQEPIYIITEYMENGSLVDFL 103
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G +G V+ G +AVK L K + + F E L +LQH
Sbjct: 11 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 69
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
L+R+ + E +I EYM N SL +L
Sbjct: 70 QRLVRLYA-VVTQEPIYIITEYMENGSLVDFL 100
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 1/123 (0%)
Query: 445 NRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGF 504
++N P+ E + + +LG G +G V G +A+K + K +
Sbjct: 5 SKNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSE 63
Query: 505 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLE 564
+EF E + L H L+++ G C +I EYM N L YL + H+ L
Sbjct: 64 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL 123
Query: 565 KTC 567
+ C
Sbjct: 124 EMC 126
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G +G V+ G +AVK L K + + F E L +LQH
Sbjct: 17 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 75
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
L+R+ + E +I EYM N SL +L
Sbjct: 76 QRLVRLYA-VVTQEPIYIITEYMENGSLVDFL 106
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 459 IEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKL----SKTSTQGFEEFKNEVMLT 514
+E ++ +G GG+G VY+ G+ +AVK + +Q E + E L
Sbjct: 2 LEIDFAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLF 60
Query: 515 AKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFG 553
A L+H N+I + G C+ L+ E+ L+ L G
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSG 99
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 69
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFG 553
L+++ + + SEE + ++ EYM SL +L G
Sbjct: 70 EKLVQL--YAVVSEEPIYIVTEYMNKGSLLDFLKG 102
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G +G V+ G +AVK L K + + F E L +LQH
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 73
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
L+R+ + E +I EYM N SL +L
Sbjct: 74 QRLVRLYA-VVTQEPIYIITEYMENGSLVDFL 104
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G +G V+ G +AVK L K + + F E L +LQH
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 67
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
L+R+ + E +I EYM N SL +L
Sbjct: 68 QRLVRLYA-VVTQEPIYIITEYMENGSLVDFL 98
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G +G V+ G +AVK L K + + F E L +LQH
Sbjct: 4 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 62
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
L+R+ + E +I EYM N SL +L
Sbjct: 63 QRLVRLYA-VVTQEPIYIITEYMENGSLVDFL 93
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G +G V+ G +AVK L K + + F E L +LQH
Sbjct: 18 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 76
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
L+R+ + E +I EYM N SL +L
Sbjct: 77 QRLVRLYA-VVTQEPIYIITEYMENGSLVDFL 107
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G +G V+ G +AVK L K + + F E L +LQH
Sbjct: 5 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 63
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
L+R+ + E +I EYM N SL +L
Sbjct: 64 QRLVRLYA-VVTQEPIYIITEYMENGSLVDFL 94
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 69
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFG 553
L+++ + + SEE + ++ EYM SL +L G
Sbjct: 70 EKLVQL--YAVVSEEPIYIVTEYMNKGSLLDFLKG 102
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNL 522
E + I +LG+G +G VYK G + A K + S + E++ E+ + A H +
Sbjct: 11 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYI 70
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTC 567
+++LG + ++ E+ P ++D + L T ++ C
Sbjct: 71 VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVC 115
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
E F K+GEG YG VYK GEV+A+ K+ T T+G E+ L +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 521 NLIRVLGFCIDSEERMLIYEYM 542
N++++L + L++E++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL 84
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
E F K+GEG YG VYK GEV+A+ K+ T T+G E+ L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 521 NLIRVLGFCIDSEERMLIYEYM 542
N++++L + L++E++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL 83
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 15/115 (13%)
Query: 470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
++G G +G V+ G + +A+K + + E+F E + KL H L+++ G C
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 530 IDSEERMLIYEYMPNKSLDCYL---FGLSHQKTYFG-----------LEKTCSYH 570
++ L+ E+M + L YL GL +T G LE+ C H
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 127
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNL 522
E + I +LG+G +G VYK G + A K + S + E++ E+ + A H +
Sbjct: 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYI 78
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTC 567
+++LG + ++ E+ P ++D + L T ++ C
Sbjct: 79 VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVC 123
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + K++H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKIRH 72
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFG 553
L+++ + + SEE + ++ EYM SL +L G
Sbjct: 73 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKG 105
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPC--GEVI--AVKKLSKTST-QGFEEFKNEVMLTAK 516
A E + LGEG +G VY+GV GE I AVK K T E+F +E ++
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 517 LQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
L H ++++++G I+ E +I E P L YL
Sbjct: 82 LDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYL 115
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPC--GEVI--AVKKLSKTST-QGFEEFKNEVMLTAK 516
A E + LGEG +G VY+GV GE I AVK K T E+F +E ++
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 517 LQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
L H ++++++G I+ E +I E P L YL
Sbjct: 70 LDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYL 103
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSK-TSTQGF 504
V+ + E A E+ ++ +LG+G +G VY+GV G V +A+K +++ S +
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRER 63
Query: 505 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQ 557
EF NE + + +++R+LG + ++I E M L YL L +
Sbjct: 64 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 116
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPC--GEVI--AVKKLSKTST-QGFEEFKNEVMLTAK 516
A E + LGEG +G VY+GV GE I AVK K T E+F +E ++
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 517 LQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
L H ++++++G I+ E +I E P L YL
Sbjct: 66 LDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYL 99
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFK-NEVMLTAKLQ 518
+++ +F KLG G Y VYKG+ G +A+K++ S +G E+ L +L+
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLE 564
H N++R+ + L++E+M N L Y+ + T GLE
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLE 106
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K E F E + KL+H
Sbjct: 181 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGNMSPEAFLQEAQVMKKLRH 239
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFG 553
L+++ + + SEE + ++ EYM SL +L G
Sbjct: 240 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKG 272
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 8/109 (7%)
Query: 449 PNLRVYSLA-DIEAATERFSIRNKLGEGGYGPVYKGVLPCGE----VIAVKKLSKTST-Q 502
PN V A +I+A+ I +G G +G V G L +A+K L T +
Sbjct: 15 PNQAVREFAKEIDASC--IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK 72
Query: 503 GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
+F +E + + H N+I + G + M+I EYM N SLD +L
Sbjct: 73 QRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL 121
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFK-NEV 511
S A + +R+ KLGEG YG VYK + E +A+K++ + +G EV
Sbjct: 25 SAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREV 84
Query: 512 MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPN 544
L +LQH N+I + + LI+EY N
Sbjct: 85 SLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN 117
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFG 553
L+++ + + SEE + ++ EYM L +L G
Sbjct: 73 EKLVQL--YAVVSEEPIYIVMEYMSKGCLLDFLKG 105
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSKTSTQGFE-EFKNEV 511
E A E+ ++ +LG+G +G VY+GV G V +A+K +++ ++ EF NE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEA 66
Query: 512 MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQ 557
+ + +++R+LG + ++I E M L YL L +
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 112
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSK-TSTQGFEEFKNEV 511
E A E+ ++ +LG+G +G VY+GV G V +A+K +++ S + EF NE
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEA 64
Query: 512 MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQ 557
+ + +++R+LG + ++I E M L YL L +
Sbjct: 65 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 110
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFG 553
L+++ + + SEE + ++ EYM L +L G
Sbjct: 73 EKLVQL--YAVVSEEPIYIVTEYMSKGCLLDFLKG 105
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Query: 472 LGEGGYGPVYKGV---------LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNL 522
LG+G + ++KGV L EV+ +K L K E F + +KL H +L
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVL-LKVLDKAHRNYSESFFEAASMMSKLSHKHL 74
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
+ G C+ +E +L+ E++ SLD YL
Sbjct: 75 VLNYGVCVCGDENILVQEFVKFGSLDTYL 103
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
L G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
LG C+ S + LI + MP C L + K G
Sbjct: 90 LGICLTSTVQ-LIMQLMP---FGCLLDYVREHKDNIG 122
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+ +L + TS + +E +E + A + + ++ R+
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
LG C+ S + LI + MP C L + K G
Sbjct: 117 LGICLTSTVQ-LITQLMP---FGCLLDYVREHKDNIG 149
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Query: 470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
+LG G +G V G G+ K+ K + +EF E + L H L+++ G C
Sbjct: 14 KELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 530 IDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTC 567
+I EYM N L YL + H+ L + C
Sbjct: 73 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 110
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Query: 470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
+LG G +G V G G+ K+ K + +EF E + L H L+++ G C
Sbjct: 15 KELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 530 IDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTC 567
+I EYM N L YL + H+ L + C
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 111
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 42/88 (47%), Gaps = 13/88 (14%)
Query: 472 LGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCID 531
+G G YG VYKG L +AVK S + Q F KN + ++H N+ R F +
Sbjct: 21 IGRGRYGAVYKGSLD-ERPVAVKVFSFANRQNFINEKN-IYRVPLMEHDNIAR---FIVG 75
Query: 532 SE--------ERMLIYEYMPNKSLDCYL 551
E E +L+ EY PN SL YL
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXKYL 103
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G G V+ G +AVK L K + + F E L +LQH
Sbjct: 9 EVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 67
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
L+R+ + E +I EYM N SL +L
Sbjct: 68 QRLVRLYA-VVTQEPIYIITEYMENGSLVDFL 98
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 5 EIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKH 63
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYL 551
L+++ + + SEE + ++ EYM SL +L
Sbjct: 64 DKLVQL--YAVVSEEPIYIVTEYMNKGSLLDFL 94
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
L G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
LG C+ S + LI + MP C L + K G
Sbjct: 83 LGICLTSTVQ-LITQLMP---FGCLLDYVREHKDNIG 115
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Query: 470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
+LG G +G V G G+ K+ K + +EF E + L H L+++ G C
Sbjct: 10 KELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 530 IDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTC 567
+I EYM N L YL + H+ L + C
Sbjct: 69 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 106
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Query: 470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
+LG G +G V G +A+K + K + +EF E + L H L+++ G C
Sbjct: 21 KELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 530 IDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTC 567
+I EYM N L YL + H+ L + C
Sbjct: 80 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 117
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Query: 470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
+LG G +G V G G+ K+ K + +EF E + L H L+++ G C
Sbjct: 15 KELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 530 IDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTC 567
+I EYM N L YL + H+ L + C
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 111
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 44/108 (40%), Gaps = 6/108 (5%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
PN V A E I +G G +G V G L + KT G+ E
Sbjct: 19 PNEAVREFAK-EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQ 77
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
F +E + + H N+I + G S M+I E+M N SLD +L
Sbjct: 78 RRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL 125
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
L G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFG 562
LG C+ S + LI + MP C L + K G
Sbjct: 90 LGICLTSTVQ-LITQLMP---FGCLLDYVREHKDNIG 122
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKG---VLPCGEV---IAVKKLSKT-STQGFE 505
VY + E + E+ ++ +LG+G +G VY+G + GE +AVK ++++ S +
Sbjct: 6 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 506 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGL 554
EF NE + +++R+LG + +++ E M + L YL L
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSL 114
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKG---VLPCGEV---IAVKKLSKT-STQGFE 505
VY + E + E+ ++ +LG+G +G VY+G + GE +AVK ++++ S +
Sbjct: 7 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 66
Query: 506 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGL 554
EF NE + +++R+LG + +++ E M + L YL L
Sbjct: 67 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSL 115
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 15/82 (18%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 56 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 109
Query: 529 CIDSEERM------LIYEYMPN 544
S E+ L+ +Y+P
Sbjct: 110 FYSSGEKKDEVYLNLVLDYVPE 131
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYLFGLSHQKTY-----FGLE 564
G C+ SE +++ YM + L ++ +H T FGL+
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 141
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Query: 468 IRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-----FKNEVMLTAKLQHVNL 522
I +G G +G V G L + KT G+ E F +E + + H N+
Sbjct: 11 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 70
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
I + G S M+I E+M N SLD +L
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFL 99
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKG---VLPCGEV---IAVKKLSKT-STQGFE 505
VY + E + E+ ++ +LG+G +G VY+G + GE +AVK ++++ S +
Sbjct: 6 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 506 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGL 554
EF NE + +++R+LG + +++ E M + L YL L
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSL 114
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 15/82 (18%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 62 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 529 CIDSEERM------LIYEYMPN 544
S E+ L+ +Y+P
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPE 137
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 15/82 (18%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 66 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 119
Query: 529 CIDSEERM------LIYEYMPN 544
S E+ L+ +Y+P
Sbjct: 120 FYSSGEKKDEVYLNLVLDYVPE 141
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 15/82 (18%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 62 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 529 CIDSEERM------LIYEYMPN 544
S E+ L+ +Y+P
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPE 137
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYLFGLSHQKTY-----FGLE 564
G C+ SE +++ YM + L ++ +H T FGL+
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 139
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 15/82 (18%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 64 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 117
Query: 529 CIDSEERM------LIYEYMPN 544
S E+ L+ +Y+P
Sbjct: 118 FYSSGEKKDEVYLNLVLDYVPE 139
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 15/81 (18%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 33 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 86
Query: 529 CIDSEERM------LIYEYMP 543
S E+ L+ +Y+P
Sbjct: 87 FYSSGEKKDEVYLNLVLDYVP 107
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYLFGLSHQKTY-----FGLE 564
G C+ SE +++ YM + L ++ +H T FGL+
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 200
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 15/81 (18%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ QG + FKN E+ + KL H N++R+ F
Sbjct: 28 IGNGSFGVVYQAKL-CDSGELVAIKKV----LQG-KAFKNRELQIMRKLDHCNIVRLRYF 81
Query: 529 CIDSEERM------LIYEYMP 543
S E+ L+ +Y+P
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVP 102
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 15/82 (18%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 107 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 160
Query: 529 CIDSEERM------LIYEYMPN 544
S E+ L+ +Y+P
Sbjct: 161 FYSSGEKKDEVYLNLVLDYVPE 182
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 15/82 (18%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ QG + FKN E+ + KL H N++R+ F
Sbjct: 28 IGNGSFGVVYQAKL-CDSGELVAIKKV----LQG-KAFKNRELQIMRKLDHCNIVRLRYF 81
Query: 529 CIDSEERM------LIYEYMPN 544
S E+ L+ +Y+P
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPE 103
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYLFGLSHQKTY-----FGLE 564
G C+ SE +++ YM + L ++ +H T FGL+
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 142
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYLFGLSHQKTY-----FGLE 564
G C+ SE +++ YM + L ++ +H T FGL+
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 146
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYLFGLSHQKTY-----FGLE 564
G C+ SE +++ YM + L ++ +H T FGL+
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 142
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYLFGLSHQKTY-----FGLE 564
G C+ SE +++ YM + L ++ +H T FGL+
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 141
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYLFGLSHQKTY-----FGLE 564
G C+ SE +++ YM + L ++ +H T FGL+
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 160
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 472 LGEGGYGPVYKGV---------LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNL 522
LG+G + ++KGV L EV+ +K L K E F + +KL H +L
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVL-LKVLDKAHRNYSESFFEAASMMSKLSHKHL 74
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
+ G C +E +L+ E++ SLD YL
Sbjct: 75 VLNYGVCFCGDENILVQEFVKFGSLDTYL 103
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 15/82 (18%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ QG + FKN E+ + KL H N++R+ F
Sbjct: 28 IGNGSFGVVYQAKL-CDSGELVAIKKV----LQG-KAFKNRELQIMRKLDHCNIVRLRYF 81
Query: 529 CIDSEERM------LIYEYMPN 544
S E+ L+ +Y+P
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPE 103
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYLFGLSHQKTY-----FGLE 564
G C+ SE +++ YM + L ++ +H T FGL+
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 141
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 15/82 (18%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 40 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 93
Query: 529 CIDSEERM------LIYEYMPN 544
S E+ L+ +Y+P
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPE 115
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 15/82 (18%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 40 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 93
Query: 529 CIDSEERM------LIYEYMPN 544
S E+ L+ +Y+P
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPE 115
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 15/82 (18%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 41 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 94
Query: 529 CIDSEERM------LIYEYMPN 544
S E+ L+ +Y+P
Sbjct: 95 FYSSGEKKDEVYLNLVLDYVPE 116
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYLFGLSHQKTY-----FGLE 564
G C+ SE +++ YM + L ++ +H T FGL+
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 159
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGE----VIAVKKLSKTST-QGFEEFKNEVMLTAKLQHV 520
I +G G +G V G L +A+K L T + +F +E + + H
Sbjct: 10 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 69
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
N+I + G + M+I EYM N SLD +L
Sbjct: 70 NIIHLEGVVTKCKPVMIITEYMENGSLDAFL 100
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGE----VIAVKKLSKTST-QGFEEFKNEVMLTAKLQHV 520
I +G G +G V G L +A+K L T + +F +E + + H
Sbjct: 16 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 75
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
N+I + G + M+I EYM N SLD +L
Sbjct: 76 NIIHLEGVVTKCKPVMIITEYMENGSLDAFL 106
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYLFGLSHQKTY-----FGLE 564
G C+ SE +++ YM + L ++ +H T FGL+
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 140
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 15/82 (18%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 36 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 89
Query: 529 CIDSEERM------LIYEYMPN 544
S E+ L+ +Y+P
Sbjct: 90 FYSSGEKKDEVYLNLVLDYVPE 111
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 466 FSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS---KTSTQGFEEFKNEVMLTAKLQHVN 521
FS ++G G +G VY + EV+A+KK+S K S + +++ EV KL+H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 522 LIRVLGFCIDSEERMLIYEY 541
I+ G + L+ EY
Sbjct: 77 TIQYRGCYLREHTAWLVMEY 96
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYLFGLSHQKTY-----FGLE 564
G C+ SE +++ YM + L ++ +H T FGL+
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 140
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 15/82 (18%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 47 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 100
Query: 529 CIDSEERM------LIYEYMPN 544
S E+ L+ +Y+P
Sbjct: 101 FYSSGEKKDEVYLNLVLDYVPE 122
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYLFGLSHQKTY-----FGLE 564
G C+ SE +++ YM + L ++ +H T FGL+
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 138
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYLFGLSHQKTY-----FGLE 564
G C+ SE +++ YM + L ++ +H T FGL+
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 141
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYLFGLSHQKTY-----FGLE 564
G C+ SE +++ YM + L ++ +H T FGL+
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 133
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYLFGLSHQKTY-----FGLE 564
G C+ SE +++ YM + L ++ +H T FGL+
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 139
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYLFGLSHQKTY-----FGLE 564
G C+ SE +++ YM + L ++ +H T FGL+
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 136
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 446 RNVPNLRVYSLAD---IEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTST 501
RN P ++ L + + E F + KLGEG YG VYK + G+++A+K++ S
Sbjct: 8 RNPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES- 66
Query: 502 QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEY 541
+E E+ + + ++++ G + + ++ EY
Sbjct: 67 -DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY 105
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 15/82 (18%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 28 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 529 CIDSEERM------LIYEYMPN 544
S E+ L+ +Y+P
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPE 103
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 15/82 (18%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 28 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 529 CIDSEERM------LIYEYMPN 544
S E+ L+ +Y+P
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPE 103
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 466 FSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS---KTSTQGFEEFKNEVMLTAKLQHVN 521
FS ++G G +G VY + EV+A+KK+S K S + +++ EV KL+H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 522 LIRVLGFCIDSEERMLIYEY 541
I+ G + L+ EY
Sbjct: 116 TIQYRGCYLREHTAWLVMEY 135
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 15/82 (18%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 28 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 529 CIDSEERM------LIYEYMPN 544
S E+ L+ +Y+P
Sbjct: 82 FYSSGEKKDVVYLNLVLDYVPE 103
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 15/82 (18%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 28 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 529 CIDSEERM------LIYEYMPN 544
S E+ L+ +Y+P
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPE 103
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 15/82 (18%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 29 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 82
Query: 529 CIDSEERM------LIYEYMPN 544
S E+ L+ +Y+P
Sbjct: 83 FYSSGEKKDEVYLNLVLDYVPE 104
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 15/95 (15%)
Query: 468 IRNKLGEGGYGPVYKGVLPC--------GEVIAVKKL-SKTSTQGFEEFKNEVMLTAKLQ 518
IR+ LGEG +G V L C GE++AVK L + Q +K E+ + L
Sbjct: 19 IRD-LGEGHFGKV---SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLY 74
Query: 519 HVNLIRVLGFCIDSEER--MLIYEYMPNKSLDCYL 551
H ++I+ G C D E+ L+ EY+P SL YL
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL 109
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 15/95 (15%)
Query: 468 IRNKLGEGGYGPVYKGVLPC--------GEVIAVKKL-SKTSTQGFEEFKNEVMLTAKLQ 518
IR+ LGEG +G V L C GE++AVK L + Q +K E+ + L
Sbjct: 19 IRD-LGEGHFGKV---SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLY 74
Query: 519 HVNLIRVLGFCIDSEER--MLIYEYMPNKSLDCYL 551
H ++I+ G C D E+ L+ EY+P SL YL
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL 109
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 15/82 (18%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 32 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 85
Query: 529 CIDSEERM------LIYEYMPN 544
S E+ L+ +Y+P
Sbjct: 86 FYSSGEKKDEVYLNLVLDYVPE 107
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
Query: 459 IEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ 518
+E E ++ +LG G +G V G +AVK + K + +EF E KL
Sbjct: 3 MELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMI-KEGSMSEDEFFQEAQTMMKLS 61
Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKT 566
H L++ G C ++ EY+ N L YL SH K GLE +
Sbjct: 62 HPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYL--RSHGK---GLEPS 104
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E++ K+GEG YG VYK G ++A+K++ +G E+ L +L
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL 76
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
H N++ ++ L++E+M
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFM 101
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E++ K+GEG YG VYK G ++A+K++ +G E+ L +L
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL 76
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYM 542
H N++ ++ L++E+M
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFM 101
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLI 523
+I+ K+G G +G V++ G +AVK L + + EF EV + +L+H N++
Sbjct: 39 LNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 524 RVLGFCIDSEERMLIYEYMPNKSL 547
+G ++ EY+ SL
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSL 121
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKG---VLPCGEV---IAVKKLSKT-STQGFE 505
V+ + E + E+ ++ +LG+G +G VY+G + GE +AVK ++++ S +
Sbjct: 3 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 62
Query: 506 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGL 554
EF NE + +++R+LG + +++ E M + L YL L
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSL 111
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKG---VLPCGEV---IAVKKLSKT-STQGFE 505
V+ + E + E+ ++ +LG+G +G VY+G + GE +AVK ++++ S +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 506 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGL 554
EF NE + +++R+LG + +++ E M + L YL L
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSL 114
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K L + TS + +E +E + A + + R+
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 526 LGFCIDSEERMLIYEYMP 543
LG C+ S + L+ + MP
Sbjct: 85 LGICLTSTVQ-LVTQLMP 101
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKG---VLPCGEV---IAVKKLSKT-STQGFE 505
V+ + E + E+ ++ +LG+G +G VY+G + GE +AVK ++++ S +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 506 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGL 554
EF NE + +++R+LG + +++ E M + L YL L
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSL 114
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKG---VLPCGEV---IAVKKLSKT-STQGFE 505
V+ + E + E+ ++ +LG+G +G VY+G + GE +AVK ++++ S +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 506 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGL 554
EF NE + +++R+LG + +++ E M + L YL L
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSL 114
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLI 523
+I+ K+G G +G V++ G +AVK L + + EF EV + +L+H N++
Sbjct: 39 LNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 524 RVLGFCIDSEERMLIYEYMPNKSL 547
+G ++ EY+ SL
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSL 121
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIR 524
+ I +LG+G +G VYK V+A K+ T S + E++ E+ + A H N+++
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 525 VLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTC 567
+L ++ E+ ++D + L T ++ C
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVC 141
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIR 524
+ I +LG+G +G VYK V+A K+ T S + E++ E+ + A H N+++
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 525 VLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTC 567
+L ++ E+ ++D + L T ++ C
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVC 141
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIR 524
+ I +LG+G +G VYK V+A K+ T S + E++ E+ + A H N+++
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 525 VLGFCIDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKTC 567
+L ++ E+ ++D + L T ++ C
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVC 141
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 7/102 (6%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKG---VLPCGEV---IAVKKLSKT-STQGFEEFKNEVM 512
E + E+ ++ +LG+G +G VY+G + GE +AVK ++++ S + EF NE
Sbjct: 12 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 71
Query: 513 LTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFGL 554
+ +++R+LG + +++ E M + L YL L
Sbjct: 72 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSL 113
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 1/107 (0%)
Query: 441 AGDFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTS 500
A F R ++ L + + E+ I +G+G +G VY G I + + + +
Sbjct: 11 ARSFPRKASQTSIF-LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDN 69
Query: 501 TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
+ FK EVM + +H N++ +G C+ +I ++L
Sbjct: 70 EDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTL 116
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 6/108 (5%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
PN V+ A E I +G G +G V G L V KT G+ E
Sbjct: 29 PNRAVHQFAK-ELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQ 87
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
F E + + H N++ + G + M++ E+M N +LD +L
Sbjct: 88 RRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFL 135
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHVN 521
E++ K+GEG YG VYK GE A+KK+ + +G E+ + +L+H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 522 LIRVLGFCIDSEERMLIYEYM 542
++++ + +L++E++
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHL 82
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHVN 521
E++ K+GEG YG VYK GE A+KK+ + +G E+ + +L+H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 522 LIRVLGFCIDSEERMLIYEYM 542
++++ + +L++E++
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHL 82
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHVN 521
E++ K+GEG YG VYK GE A+KK+ + +G E+ + +L+H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 522 LIRVLGFCIDSEERMLIYEYM 542
++++ + +L++E++
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHL 82
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 459 IEAATERFSIRNKLGEGGYGPVYKG-VLPCGEVIAVKKLSKTSTQG---FEEFKNEVMLT 514
I E F + N LG+G + VY+ + G +A+K + K + + +NEV +
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 515 AKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
+L+H +++ + + DS L+ E N ++ YL
Sbjct: 66 CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL 102
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPC-----GEVIAVKKLSKTSTQGFEE--FKNEVMLT 514
+ E++ +GEG YG V K C G ++A+KK ++ + E+ L
Sbjct: 23 SMEKYENLGLVGEGSYGMVMK----CRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLL 78
Query: 515 AKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLD 548
+L+H NL+ +L C + L++E++ + LD
Sbjct: 79 KQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILD 112
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 15/95 (15%)
Query: 468 IRNKLGEGGYGPVYKGVLPC--------GEVIAVKKLSK-TSTQGFEEFKNEVMLTAKLQ 518
IR+ LGEG +G V L C GE++AVK L + Q ++ E+ + L
Sbjct: 14 IRD-LGEGHFGKV---SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLY 69
Query: 519 HVNLIRVLGFCIDSEER--MLIYEYMPNKSLDCYL 551
H ++++ G C D E+ L+ EY+P SL YL
Sbjct: 70 HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL 104
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 15/96 (15%)
Query: 467 SIRNKLGEGGYGPVYKGVLPC--------GEVIAVKKLSK-TSTQGFEEFKNEVMLTAKL 517
IR+ LGEG +G V L C GE++AVK L + Q ++ E+ + L
Sbjct: 12 KIRD-LGEGHFGKV---SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTL 67
Query: 518 QHVNLIRVLGFCIDSEER--MLIYEYMPNKSLDCYL 551
H ++++ G C D E+ L+ EY+P SL YL
Sbjct: 68 YHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL 103
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 469 RNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLG 527
R LG+G YG VY G +V IA+K++ + ++ + E+ L L+H N+++ LG
Sbjct: 13 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG 72
Query: 528 FCIDSEERMLIYEYMPNKSLDCYL 551
++ + E +P SL L
Sbjct: 73 SFSENGFIKIFMEQVPGGSLSALL 96
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 466 FSIRNKLGEGGYGPVYKGV--LPCGEVI--AVKKLSK---TSTQGFEEFKNEVMLTAKLQ 518
+ KLG+G +G V +G P G+ + AVK L + + ++F EV L
Sbjct: 14 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 73
Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
H NLIR+ G + +M + E P SL
Sbjct: 74 HRNLIRLYGVVLTPPMKM-VTELAPLGSL 101
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 469 RNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLG 527
R LG+G YG VY G +V IA+K++ + ++ + E+ L L+H N+++ LG
Sbjct: 27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG 86
Query: 528 FCIDSEERMLIYEYMPNKSLDCYL 551
++ + E +P SL L
Sbjct: 87 SFSENGFIKIFMEQVPGGSLSALL 110
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 466 FSIRNKLGEGGYGPVYKGV--LPCGEVI--AVKKLSK---TSTQGFEEFKNEVMLTAKLQ 518
+ KLG+G +G V +G P G+ + AVK L + + ++F EV L
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
H NLIR+ G + +M + E P SL
Sbjct: 70 HRNLIRLYGVVLTPPMKM-VTELAPLGSL 97
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 466 FSIRNKLGEGGYGPVYKGV--LPCGEVI--AVKKLSK---TSTQGFEEFKNEVMLTAKLQ 518
+ KLG+G +G V +G P G+ + AVK L + + ++F EV L
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
H NLIR+ G + +M + E P SL
Sbjct: 70 HRNLIRLYGVVLTPPMKM-VTELAPLGSL 97
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 466 FSIRNKLGEGGYGPVYKGV--LPCGEVI--AVKKLSK---TSTQGFEEFKNEVMLTAKLQ 518
+ KLG+G +G V +G P G+ + AVK L + + ++F EV L
Sbjct: 14 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 73
Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
H NLIR+ G + +M + E P SL
Sbjct: 74 HRNLIRLYGVVLTPPMKM-VTELAPLGSL 101
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 466 FSIRNKLGEGGYGPVYKGV--LPCGEVI--AVKKLSK---TSTQGFEEFKNEVMLTAKLQ 518
+ KLG+G +G V +G P G+ + AVK L + + ++F EV L
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
H NLIR+ G + +M + E P SL
Sbjct: 70 HRNLIRLYGVVLTPPMKM-VTELAPLGSL 97
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 15/95 (15%)
Query: 468 IRNKLGEGGYGPVYKGVLPC--------GEVIAVKKL-SKTSTQGFEEFKNEVMLTAKLQ 518
IR+ LGEG +G V L C GE++AVK L + Q +K E+ + L
Sbjct: 36 IRD-LGEGHFGKV---SLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLY 91
Query: 519 HVNLIRVLGFCID--SEERMLIYEYMPNKSLDCYL 551
H ++I+ G C D + L+ EY+P SL YL
Sbjct: 92 HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL 126
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 466 FSIRNKLGEGGYGPVYKGV--LPCGEVI--AVKKLSK---TSTQGFEEFKNEVMLTAKLQ 518
+ KLG+G +G V +G P G+ + AVK L + + ++F EV L
Sbjct: 20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 79
Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
H NLIR+ G + +M + E P SL
Sbjct: 80 HRNLIRLYGVVLTPPMKM-VTELAPLGSL 107
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 466 FSIRNKLGEGGYGPVYKGV--LPCGEVI--AVKKLSK---TSTQGFEEFKNEVMLTAKLQ 518
+ KLG+G +G V +G P G+ + AVK L + + ++F EV L
Sbjct: 20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 79
Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
H NLIR+ G + +M + E P SL
Sbjct: 80 HRNLIRLYGVVLTPPMKM-VTELAPLGSL 107
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 471 KLGEGGYGPV-YKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
K+GEG G V V G+++AVKK+ Q E NEV++ QH N++ +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 530 IDSEERMLIYEYMPNKSL 547
+ +E ++ E++ +L
Sbjct: 87 LVGDELWVVMEFLEGGAL 104
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 470 NKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQGFE-EFKNEVMLTAKLQHVNLIRVLG 527
+KLGEG Y VYKG + ++A+K++ +G EV L L+H N++ +
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 528 FCIDSEERMLIYEYMPNKSLDCYL 551
+ L++EY+ +K L YL
Sbjct: 68 IIHTEKSLTLVFEYL-DKDLKQYL 90
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 35.4 bits (80), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 471 KLGEGGYGPV-YKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
K+GEG G V V G+++AVKK+ Q E NEV++ QH N++ +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 530 IDSEERMLIYEYMPNKSL 547
+ +E ++ E++ +L
Sbjct: 91 LVGDELWVVMEFLEGGAL 108
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 471 KLGEGGYGPV-YKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
K+GEG G V V G+++AVKK+ Q E NEV++ QH N++ +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 530 IDSEERMLIYEYMPNKSL 547
+ +E ++ E++ +L
Sbjct: 98 LVGDELWVVMEFLEGGAL 115
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 35.4 bits (80), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG G +G V+ +AVK + K + E F E + LQH
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQH 236
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
L++ L + E +I E+M SL +L
Sbjct: 237 DKLVK-LHAVVTKEPIYIITEFMAKGSLLDFL 267
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 35.4 bits (80), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 472 LGEGGYGPVYKGVLPCGEV-----IAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
LG G +G V+K C E +A K + + EE KNE+ + +L H NLI++
Sbjct: 97 LGGGRFGQVHK----CEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLY 152
Query: 527 GFCIDSEERMLIYEYMPNKSL 547
+ +L+ EY+ L
Sbjct: 153 DAFESKNDIVLVMEYVDGGEL 173
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 471 KLGEGGYGPV-YKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
K+GEG G V V G+++AVKK+ Q E NEV++ QH N++ +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 530 IDSEERMLIYEYMPNKSL 547
+ +E ++ E++ +L
Sbjct: 96 LVGDELWVVMEFLEGGAL 113
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
+ + +G+G +G V G G +AVK + +T + F E + +L+H NL+
Sbjct: 21 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLV 77
Query: 524 RVLGFCIDSEERM-LIYEYMPNKSLDCYL 551
++LG ++ + + ++ EYM SL YL
Sbjct: 78 QLLGVIVEEKGGLYIVTEYMAKGSLVDYL 106
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
+ + +G+G +G V G G +AVK + +T + F E + +L+H NL+
Sbjct: 12 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLV 68
Query: 524 RVLGFCIDSEERM-LIYEYMPNKSLDCYL 551
++LG ++ + + ++ EYM SL YL
Sbjct: 69 QLLGVIVEEKGGLYIVTEYMAKGSLVDYL 97
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG G +G V+ +AVK + K + E F E + LQH
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQH 242
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
L++ L + E +I E+M SL +L
Sbjct: 243 DKLVK-LHAVVTKEPIYIITEFMAKGSLLDFL 273
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
+ + +G+G +G V G G +AVK + +T + F E + +L+H NL+
Sbjct: 193 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLV 249
Query: 524 RVLGFCIDSEERM-LIYEYMPNKSLDCYL 551
++LG ++ + + ++ EYM SL YL
Sbjct: 250 QLLGVIVEEKGGLYIVTEYMAKGSLVDYL 278
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKL---SKTSTQGFEEFKNEVMLTAKLQH 519
ER+ I +KLG GG VY + +A+K + + + + F+ EV +++L H
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSH 70
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
N++ ++ + + L+ EY+ +L Y+
Sbjct: 71 QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI 102
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
+ + +G+G +G V G G +AVK + +T + F E + +L+H NL+
Sbjct: 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLV 62
Query: 524 RVLGFCIDSEERM-LIYEYMPNKSLDCYL 551
++LG ++ + + ++ EYM SL YL
Sbjct: 63 QLLGVIVEEKGGLYIVTEYMAKGSLVDYL 91
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 12/114 (10%)
Query: 442 GDFNRNV---PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV---IAVKK 495
G NR V P+ +Y + D ++ +GEG +G V K + + A+K+
Sbjct: 1 GALNRKVKNNPDPTIYPVLD----WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKR 56
Query: 496 LSK-TSTQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
+ + S +F E+ + KL H N+I +LG C L EY P+ +L
Sbjct: 57 MKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL 110
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 471 KLGEGGYGPV-YKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
K+GEG G V V G+++AVKK+ Q E NEV++ QH N++ +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 530 IDSEERMLIYEYMPNKSL 547
+ +E ++ E++ +L
Sbjct: 218 LVGDELWVVMEFLEGGAL 235
>pdb|3CZ8|A Chain A, Crystal Structure Of Putative Sporulation-Specific
Glycosylase Ydhd From Bacillus Subtilis
pdb|3CZ8|B Chain B, Crystal Structure Of Putative Sporulation-Specific
Glycosylase Ydhd From Bacillus Subtilis
Length = 319
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 23/115 (20%)
Query: 251 LSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQV 310
+ + K+++ +P YGY W + P G A+A + I+ ++ P +
Sbjct: 212 VPSRKIIIGVPLYGYDWII--PYQPGTVASA---------ISNQNAIERAMRYQAP---I 257
Query: 311 MYNSTYEVNYF-------STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSF 358
Y++ Y+ +F T VW F+ V ++ K+ +E RL AWQ++
Sbjct: 258 QYSAEYQSPFFRYSDQQGRTHEVW--FEGVRSMSRKMQIVREYRLQAIGAWQLTL 310
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Query: 463 TERFSIRNKLGEGGYGPVYK------GVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAK 516
++ + ++ +LG+G + V + G+ ++I KKLS + F++ + E + K
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS---ARDFQKLEREARICRK 60
Query: 517 LQHVNLIRV 525
LQH N++R+
Sbjct: 61 LQHPNIVRL 69
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Query: 463 TERFSIRNKLGEGGYGPVYK------GVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAK 516
++ + ++ +LG+G + V + G+ ++I KKLS + F++ + E + K
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS---ARDFQKLEREARICRK 61
Query: 517 LQHVNLIRV 525
LQH N++R+
Sbjct: 62 LQHPNIVRL 70
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 17/101 (16%)
Query: 464 ERFSIR-NKLGEGGYGPVYKGVLPC---------GEVIAVKKLSKTST-QGFEEFKNEVM 512
+RF R LGEG +G V C GE +AVK L S + K E+
Sbjct: 20 KRFLKRIRDLGEGHFGKVEL----CRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIE 75
Query: 513 LTAKLQHVNLIRVLGFCIDSEER--MLIYEYMPNKSLDCYL 551
+ L H N+++ G C + LI E++P+ SL YL
Sbjct: 76 ILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL 116
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG G +G V+ +AVK + K + E F E + LQH
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQH 69
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
L++ L + E +I E+M SL +L
Sbjct: 70 DKLVK-LHAVVTKEPIYIITEFMAKGSLLDFL 100
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 11/85 (12%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-----GEVIAVKKLSKTSTQGF--EEFKNEVMLTAK 516
E++ K+GEG YG V+K C G+++A+KK ++ + E+ + +
Sbjct: 3 EKYEKIGKIGEGSYGVVFK----CRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQ 58
Query: 517 LQHVNLIRVLGFCIDSEERMLIYEY 541
L+H NL+ +L L++EY
Sbjct: 59 LKHPNLVNLLEVFRRKRRLHLVFEY 83
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 466 FSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFE-EFKNEVMLTAKLQHVNLI 523
F +++ LGEG YG V P GE++A+KK+ F E+ + +H N+I
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 524 RVL 526
+
Sbjct: 73 TIF 75
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 466 FSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFE-EFKNEVMLTAKLQHVNLI 523
F +++ LGEG YG V P GE++A+KK+ F E+ + +H N+I
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 524 RVL 526
+
Sbjct: 73 TIF 75
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Query: 463 TERFSIRNKLGEGGYGPVYK------GVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAK 516
++ + ++ +LG+G + V + G+ ++I KKLS + F++ + E + K
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS---ARDFQKLEREARICRK 84
Query: 517 LQHVNLIRV 525
LQH N++R+
Sbjct: 85 LQHPNIVRL 93
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVI-AVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+++ N +G G +G V V + A KK+ K + + FK E+ + L H N+IR
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 525 VLGFCIDSEERMLIYE 540
+ D+ + L+ E
Sbjct: 71 LYETFEDNTDIYLVME 86
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 466 FSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFE-EFKNEVMLTAKLQHVNLI 523
F +++ LGEG YG V P GE++A+KK+ F E+ + +H N+I
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 524 RVL 526
+
Sbjct: 73 TIF 75
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Query: 463 TERFSIRNKLGEGGYGPVYK------GVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAK 516
++ + ++ +LG+G + V + G+ ++I KKLS + F++ + E + K
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS---ARDFQKLEREARICRK 61
Query: 517 LQHVNLIRV 525
LQH N++R+
Sbjct: 62 LQHPNIVRL 70
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 17/101 (16%)
Query: 464 ERFSIR-NKLGEGGYGPVYKGVLPC---------GEVIAVKKLSKTST-QGFEEFKNEVM 512
+RF R LGEG +G V C GE +AVK L S + K E+
Sbjct: 8 KRFLKRIRDLGEGHFGKVEL----CRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIE 63
Query: 513 LTAKLQHVNLIRVLGFCIDSEER--MLIYEYMPNKSLDCYL 551
+ L H N+++ G C + LI E++P+ SL YL
Sbjct: 64 ILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL 104
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 471 KLGEGGYGPV-YKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
K+GEG G V V G+++AVKK+ Q E NEV++ QH N++ +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 530 IDSEERMLIYEYMPNKSL 547
+ +E ++ E++ +L
Sbjct: 141 LVGDELWVVMEFLEGGAL 158
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVI-AVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+++ N +G G +G V V + A KK+ K + + FK E+ + L H N+IR
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 87
Query: 525 VLGFCIDSEERMLIYE 540
+ D+ + L+ E
Sbjct: 88 LYETFEDNTDIYLVME 103
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 7/99 (7%)
Query: 471 KLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
KL E G ++KG + V+ V K+ ST+ +F E H N++ VLG C
Sbjct: 17 KLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 530 --IDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKT 566
+ LI +MP S L+ + H+ T F ++++
Sbjct: 77 QSPPAPHPTLITHWMPYGS----LYNVLHEGTNFVVDQS 111
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 446 RNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV---IAVKKLSK-TST 501
+N P+ +Y + D ++ +GEG +G V K + + A+K++ + S
Sbjct: 1 KNNPDPTIYPVLD----WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK 56
Query: 502 QGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
+F E+ + KL H N+I +LG C L EY P+ +L
Sbjct: 57 DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL 103
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLSKTSTQGFE-EFKNEVMLTAKLQHVN 521
E + ++G G +G V+ G L ++AVK +T + +F E + + H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 522 LIRVLGFCIDSEERMLIYEYM 542
++R++G C + ++ E +
Sbjct: 174 IVRLIGVCTQKQPIYIVMELV 194
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLSKTSTQGFE-EFKNEVMLTAKLQHVN 521
E + ++G G +G V+ G L ++AVK +T + +F E + + H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 522 LIRVLGFCIDSEERMLIYEYM 542
++R++G C + ++ E +
Sbjct: 174 IVRLIGVCTQKQPIYIVMELV 194
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 446 RNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV---IAVKKLSK-TST 501
+N P+ +Y + D ++ +GEG +G V K + + A+K++ + S
Sbjct: 11 KNNPDPTIYPVLD----WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK 66
Query: 502 QGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
+F E+ + KL H N+I +LG C L EY P+ +L
Sbjct: 67 DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL 113
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
R+ LG GG G V+ V C + +A+KK+ T Q + E+ + +L H N++
Sbjct: 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIV 71
Query: 524 RV 525
+V
Sbjct: 72 KV 73
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + A L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 521 NLIRVLGFCIDSEERMLIYEY 541
N+++ G + + L EY
Sbjct: 66 NVVKFYGHRREGNIQYLFLEY 86
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFE-EFKNEVMLTAKL- 517
AT R+ ++G G YG VYK P G +A+K + +G EV L +L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 518 --QHVNLIRVLGFC----IDSEERM-LIYEYMPNKSLDCYL 551
+H N++R++ C D E ++ L++E++ ++ L YL
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL 101
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFE-EFKNEVMLTAKL- 517
AT R+ ++G G YG VYK P G +A+K + +G EV L +L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 518 --QHVNLIRVLGFC----IDSEERM-LIYEYMPNKSLDCYL 551
+H N++R++ C D E ++ L++E++ ++ L YL
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL 101
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFE-EFKNEVMLTAKL- 517
AT R+ ++G G YG VYK P G +A+K + +G EV L +L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 518 --QHVNLIRVLGFC----IDSEERM-LIYEYMPNKSLDCYL 551
+H N++R++ C D E ++ L++E++ ++ L YL
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL 101
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEV 511
+ S+ D + RF K+G+G G VY + + G+ +A+++++ E NE+
Sbjct: 12 IVSVGDPKKKYTRFE---KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 512 MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
++ + ++ N++ L + +E ++ EY+ SL
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNL 522
+ + I +LG G +G V++ G A K + E + E+ + L+H L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSL 547
+ + D E ++IYE+M L
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGEL 135
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 504 FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL---DCYLFGLSHQKTY 560
+++FKNE+ + +++ + G + +E +IYEYM N S+ D Y F L T
Sbjct: 87 YDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTC 146
Query: 561 F 561
F
Sbjct: 147 F 147
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEV 511
+ S+ D + RF K+G+G G VY + + G+ +A+++++ E NE+
Sbjct: 12 IVSVGDPKKKYTRFE---KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 512 MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
++ + ++ N++ L + +E ++ EY+ SL
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNL 522
+ + I +LG G +G V++ G A K + E + E+ + L+H L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSL 547
+ + D E ++IYE+M L
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGEL 241
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEV 511
+ S+ D + RF K+G+G G VY + + G+ +A+++++ E NE+
Sbjct: 12 IVSVGDPKKKYTRFE---KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 512 MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
++ + ++ N++ L + +E ++ EY+ SL
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEV 511
+ S+ D + RF K+G+G G VY + + G+ +A+++++ E NE+
Sbjct: 13 IVSVGDPKKKYTRFE---KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 69
Query: 512 MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
++ + ++ N++ L + +E ++ EY+ SL
Sbjct: 70 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 105
>pdb|3RTL|A Chain A, Staphylococcus Aureus Heme-Bound Isdb-N2
pdb|3RTL|B Chain B, Staphylococcus Aureus Heme-Bound Isdb-N2
pdb|3RTL|C Chain C, Staphylococcus Aureus Heme-Bound Isdb-N2
pdb|3RTL|D Chain D, Staphylococcus Aureus Heme-Bound Isdb-N2
Length = 121
Score = 33.1 bits (74), Expect = 0.40, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Query: 100 KDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEW 159
+DT Y +Y S+ N S +F+ I+ L G + + T+ D + + +
Sbjct: 8 QDTKYVVYESVENNESMMDTFVKHPIKTGMLNGKK-----YMVMETTNDDYWKDFMVEGQ 62
Query: 160 RIAATKLDAKNSTR 173
R+ DAKN+TR
Sbjct: 63 RVRTISKDAKNNTR 76
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEV 511
+ S+ D + RF K+G+G G VY + + G+ +A+++++ E NE+
Sbjct: 13 IVSVGDPKKKYTRFE---KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 69
Query: 512 MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL 547
++ + ++ N++ L + +E ++ EY+ SL
Sbjct: 70 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 105
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 471 KLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
KL E G ++KG + V+ V K+ ST+ +F E H N++ VLG C
Sbjct: 17 KLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 530 --IDSEERMLIYEYMPNKSLDCYLFGLSHQKTYFGLEKT 566
+ LI + P S L+ + H+ T F ++++
Sbjct: 77 QSPPAPHPTLITHWXPYGS----LYNVLHEGTNFVVDQS 111
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--KGVLPCGE--VIAVKKLSKTSTQGFEEFKNEVMLTA 515
+ ++R+ KLG G YG V K L E + +KK S T+T +EV +
Sbjct: 17 QGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 76
Query: 516 KLQHVNLIRVLGFCIDSEERMLIYE 540
+L H N++++ F D L+ E
Sbjct: 77 QLDHPNIMKLYEFFEDKRNYYLVME 101
>pdb|1UPB|A Chain A, Carboxyethylarginine Synthase From Streptomyces
Clavuligerus
pdb|1UPB|B Chain B, Carboxyethylarginine Synthase From Streptomyces
Clavuligerus
pdb|1UPB|C Chain C, Carboxyethylarginine Synthase From Streptomyces
Clavuligerus
pdb|1UPB|D Chain D, Carboxyethylarginine Synthase From Streptomyces
Clavuligerus
pdb|1UPC|A Chain A, Carboxyethylarginine Synthase From Streptomyces
Clavuligerus
pdb|1UPC|B Chain B, Carboxyethylarginine Synthase From Streptomyces
Clavuligerus
pdb|1UPC|C Chain C, Carboxyethylarginine Synthase From Streptomyces
Clavuligerus
pdb|1UPC|D Chain D, Carboxyethylarginine Synthase From Streptomyces
Clavuligerus
pdb|1UPC|E Chain E, Carboxyethylarginine Synthase From Streptomyces
Clavuligerus
pdb|1UPC|F Chain F, Carboxyethylarginine Synthase From Streptomyces
Clavuligerus
pdb|2IHV|A Chain A, Carboxyethylarginine Synthase From Streptomyces
Clavuligerus: 5-Guanidinovaleric Acid Complex
pdb|2IHV|B Chain B, Carboxyethylarginine Synthase From Streptomyces
Clavuligerus: 5-Guanidinovaleric Acid Complex
pdb|2IHV|C Chain C, Carboxyethylarginine Synthase From Streptomyces
Clavuligerus: 5-Guanidinovaleric Acid Complex
pdb|2IHV|D Chain D, Carboxyethylarginine Synthase From Streptomyces
Clavuligerus: 5-Guanidinovaleric Acid Complex
pdb|2IHU|A Chain A, Carboxyethylarginine Synthase From Streptomyces
Clavuligerus: Putative Reaction Intermediate Complex
pdb|2IHU|B Chain B, Carboxyethylarginine Synthase From Streptomyces
Clavuligerus: Putative Reaction Intermediate Complex
pdb|2IHU|C Chain C, Carboxyethylarginine Synthase From Streptomyces
Clavuligerus: Putative Reaction Intermediate Complex
pdb|2IHU|D Chain D, Carboxyethylarginine Synthase From Streptomyces
Clavuligerus: Putative Reaction Intermediate Complex
Length = 573
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 94/233 (40%), Gaps = 35/233 (15%)
Query: 118 KSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSL 177
SFI S+ + L G+D P +T +G++ D W+ AA + A + + +
Sbjct: 163 PSFI--SLPVDLLGSSEGIDTTVPNPPANTPAKPVGVVADGWQKAADQAAALLAEAKHPV 220
Query: 178 LILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFAR 237
L++ A S + + + N+ I A PV YG+++G
Sbjct: 221 LVVGAAAIRSGAVPAIRALAERLNIPVITTYIAKGVLPVGHELN------YGAVTGYM-- 272
Query: 238 STDQVLK-AWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGL----V 292
D +L ++ + LV+ + Y YA L P+++ G+ V
Sbjct: 273 --DGILNFPALQTMFAPVDLVLTV-GYDYAEDL-------------RPSMWQKGIEKKTV 316
Query: 293 TYKKIKNHI-KTYGPDVQVMYNSTYEVNYFSTGTVWFGFD---DVEAVRAKIA 341
N I + Y PDV V+ + V +F T T FG D+E +RA+IA
Sbjct: 317 RISPTVNPIPRVYRPDVDVVTDVLAFVEHFETATASFGAKQRHDIEPLRARIA 369
>pdb|1EPW|A Chain A, Crystal Structure Of Clostridium Neurotoxin Type B
pdb|1F31|A Chain A, Crystal Structure Of Clostridium Botulinum Neurotoxin B
Complexed With A Trisaccharide
pdb|1I1E|A Chain A, Crystal Structure Of Clostridium Botulinum Neurotoxin B
Complexed With Doxorubicin
pdb|1G9A|A Chain A, Crystal Structure Of Clostridium Botulinum Neurotoxin B
Complexed With An Inhibitor (Experiment 3)
pdb|1G9B|A Chain A, Crystal Structure Of Clostridium Botulinum Neurotoxin B
Complexed With An Inhibitor (Experiment 1)
pdb|1G9C|A Chain A, Crystal Structure Of Clostridium Botulinum Neurotoxin B
Complexed With An Inhibitor (Experiment 4)
pdb|1G9D|A Chain A, Crystal Structure Of Clostridium Botulinum Neurotoxin B
Complexed With An Inhibitor (Experiment 2)
pdb|1S0B|A Chain A, Crystal Structure Of Botulinum Neurotoxin Type B At Ph 4.0
pdb|1S0C|A Chain A, Crystal Structure Of Botulinum Neurotoxin Type B At Ph 5.0
pdb|1S0D|A Chain A, Crystal Structure Of Botulinum Neurotoxin Type B At Ph 5.5
pdb|1S0E|A Chain A, Crystal Structure Of Botulinum Neurotoxin Type B At Ph 6.0
pdb|1S0F|A Chain A, Crystal Structure Of Botulinum Neurotoxin Type B At Ph 7.0
pdb|1S0G|A Chain A, Crystal Structure Of Botulinum Neurotoxin Type B Apo Form
pdb|2NP0|A Chain A, Crystal Structure Of The Botulinum Neurotoxin Type B
Complexed With Synaptotagamin-Ii Ectodomain
Length = 1290
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 17/104 (16%)
Query: 438 ETEAGDFNRNVPNLRVYSLADIEAAT--ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKK 495
+T A F+ ++P +++ +L D E T E F+I +K E Y G+ A+ K
Sbjct: 367 KTRASYFSDSLPPVKIKNLLDNEIYTIEEGFNISDKDMEKEYR---------GQNKAINK 417
Query: 496 LSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIY 539
Q +EE E + K+Q ++ G CID + L +
Sbjct: 418 ------QAYEEISKEHLAVYKIQMCKSVKAPGICIDVDNEDLFF 455
>pdb|3RUR|A Chain A, Staphylococcus Aureus Heme-Bound Selenomethionine-Labeled
Isdb-N2
pdb|3RUR|B Chain B, Staphylococcus Aureus Heme-Bound Selenomethionine-Labeled
Isdb-N2
pdb|3RUR|C Chain C, Staphylococcus Aureus Heme-Bound Selenomethionine-Labeled
Isdb-N2
pdb|3RUR|D Chain D, Staphylococcus Aureus Heme-Bound Selenomethionine-Labeled
Isdb-N2
Length = 121
Score = 32.7 bits (73), Expect = 0.63, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Query: 100 KDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEW 159
+DT Y +Y S+ N S +F+ I+ L G + + T+ D + +
Sbjct: 8 QDTKYVVYESVENNESXXDTFVKHPIKTGXLNGKK-----YXVXETTNDDYWKDFXVEGQ 62
Query: 160 RIAATKLDAKNSTR 173
R+ DAKN+TR
Sbjct: 63 RVRTISKDAKNNTR 76
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+ I +LG G +G V++ V G V K ++ KNE+ + +L H LI
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLIN 112
Query: 525 VLGFCIDSEERMLIYEYMPNKSL 547
+ D E +LI E++ L
Sbjct: 113 LHDAFEDKYEMVLILEFLSGGEL 135
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 521 NLIRVLGFCIDSEERMLIYEY 541
N+++ G + + L EY
Sbjct: 65 NVVKFYGHRREGNIQYLFLEY 85
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 521 NLIRVLGFCIDSEERMLIYEY 541
N+++ G + + L EY
Sbjct: 66 NVVKFYGHRREGNIQYLFLEY 86
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 521 NLIRVLGFCIDSEERMLIYEY 541
N+++ G + + L EY
Sbjct: 66 NVVKFYGHRREGNIQYLFLEY 86
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 521 NLIRVLGFCIDSEERMLIYEY 541
N+++ G + + L EY
Sbjct: 65 NVVKFYGHRREGNIQYLFLEY 85
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 521 NLIRVLGFCIDSEERMLIYEY 541
N+++ G + + L EY
Sbjct: 65 NVVKFYGHRREGNIQYLFLEY 85
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 521 NLIRVLGFCIDSEERMLIYEY 541
N+++ G + + L EY
Sbjct: 65 NVVKFYGHRREGNIQYLFLEY 85
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 470 NKLGEGG--YGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLG 527
KLGEGG Y + +G L G A+K++ Q EE + E + H N++R++
Sbjct: 35 QKLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVA 93
Query: 528 FCI 530
+C+
Sbjct: 94 YCL 96
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 521 NLIRVLGFCIDSEERMLIYEY 541
N+++ G + + L EY
Sbjct: 65 NVVKFYGHRREGNIQYLFLEY 85
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 521 NLIRVLGFCIDSEERMLIYEY 541
N+++ G + + L EY
Sbjct: 65 NVVKFYGHRREGNIQYLFLEY 85
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 521 NLIRVLGFCIDSEERMLIYEY 541
N+++ G + + L EY
Sbjct: 65 NVVKFYGHRREGNIQYLFLEY 85
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 472 LGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCI 530
LG+G +G K GEV+ +K+L + + F EV + L+H N+++ +G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 531 DSEERMLIYEYMPNKSL 547
+ I EY+ +L
Sbjct: 78 KDKRLNFITEYIKGGTL 94
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 521 NLIRVLGFCIDSEERMLIYEY 541
N+++ G + + L EY
Sbjct: 65 NVVKFYGHRREGNIQYLFLEY 85
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 521 NLIRVLGFCIDSEERMLIYEY 541
N+++ G + + L EY
Sbjct: 66 NVVKFYGHRREGNIQYLFLEY 86
>pdb|1UPA|A Chain A, Carboxyethylarginine Synthase From Streptomyces
Clavuligerus (semet Structure)
pdb|1UPA|B Chain B, Carboxyethylarginine Synthase From Streptomyces
Clavuligerus (semet Structure)
pdb|1UPA|C Chain C, Carboxyethylarginine Synthase From Streptomyces
Clavuligerus (semet Structure)
pdb|1UPA|D Chain D, Carboxyethylarginine Synthase From Streptomyces
Clavuligerus (semet Structure)
pdb|2IHT|A Chain A, Carboxyethylarginine Synthase From Streptomyces
Clavuligerus: Semet Structure
pdb|2IHT|B Chain B, Carboxyethylarginine Synthase From Streptomyces
Clavuligerus: Semet Structure
pdb|2IHT|C Chain C, Carboxyethylarginine Synthase From Streptomyces
Clavuligerus: Semet Structure
pdb|2IHT|D Chain D, Carboxyethylarginine Synthase From Streptomyces
Clavuligerus: Semet Structure
Length = 573
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 302 KTYGPDVQVMYNSTYEVNYFSTGTVWFGFD---DVEAVRAKIA 341
+ Y PDV V+ + V +F T T FG D+E +RA+IA
Sbjct: 327 RVYRPDVDVVTDVLAFVEHFETATASFGAKQRHDIEPLRARIA 369
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 521 NLIRVLGFCIDSEERMLIYEY 541
N+++ G + + L EY
Sbjct: 65 NVVKFYGHRREGNIQYLFLEY 85
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 521 NLIRVLGFCIDSEERMLIYEY 541
N+++ G + + L EY
Sbjct: 65 NVVKFYGHRREGNIQYLFLEY 85
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 521 NLIRVLGFCIDSEERMLIYEY 541
N+++ G + + L EY
Sbjct: 64 NVVKFYGHRREGNIQYLFLEY 84
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 521 NLIRVLGFCIDSEERMLIYEY 541
N+++ G + + L EY
Sbjct: 66 NVVKFYGHRREGNIQYLFLEY 86
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 521 NLIRVLGFCIDSEERMLIYEY 541
N+++ G + + L EY
Sbjct: 65 NVVKFYGHRREGNIQYLFLEY 85
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 463 TERFSIRNKLGEGGYGPVY--KGVLPCGE--VIAVKKLSKTSTQGFEEFKNEVMLTAKLQ 518
++R+ KLG G YG V K L E + +KK S T+T +EV + +L
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 519 HVNLIRVLGFCIDSEERMLIYE 540
H N++++ F D L+ E
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVME 84
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPVY------KGVLPCGEVIAVKKLSKTSTQGFEEFK 508
SLAD A + I LGEG +G V G ++I K L+K+ QG +
Sbjct: 5 SLAD-GAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIE 61
Query: 509 NEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLD 548
E+ L+H ++I++ +E +++ EY N+ D
Sbjct: 62 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD 101
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 466 FSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
F + +G G YG VYKG + G++ A+K + T + EE K E+ + K H
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE-EEIKQEINMLKKYSH 79
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 11/76 (14%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVI-----AVKKLSKTSTQGFE--EFKNEVMLTAK 516
ER++I LG+G +G VL C + I AVK ++K S + + EV L K
Sbjct: 22 ERYNIVCMLGKGSFGE----VLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKK 77
Query: 517 LQHVNLIRVLGFCIDS 532
L H N++++ DS
Sbjct: 78 LDHPNIMKLFEILEDS 93
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 521 NLIRVLGFCIDSEERMLIYEY 541
N+++ G + + L EY
Sbjct: 66 NVVKFYGHRREGNIQYLFLEY 86
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 521 NLIRVLGFCIDSEERMLIYEY 541
N+++ G + + L EY
Sbjct: 66 NVVKFYGHRREGNIQYLFLEY 86
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 521 NLIRVLGFCIDSEERMLIYEY 541
N+++ G + + L EY
Sbjct: 66 NVVKFYGHRREGNIQYLFLEY 86
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
+++ K+GEG YG V+K E++A+K++ +G E+ L +L+H
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 521 NLIRVLGFCIDSEERMLIYEY 541
N++R+ ++ L++E+
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEF 82
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPVY------KGVLPCGEVIAVKKLSKTSTQGFEEFK 508
SLAD A + I LGEG +G V G ++I K L+K+ QG +
Sbjct: 6 SLAD-GAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIE 62
Query: 509 NEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLD 548
E+ L+H ++I++ +E +++ EY N+ D
Sbjct: 63 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD 102
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
+++ K+GEG YG V+K E++A+K++ +G E+ L +L+H
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 521 NLIRVLGFCIDSEERMLIYEY 541
N++R+ ++ L++E+
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEF 82
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 11/76 (14%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVI-----AVKKLSKTSTQGFE--EFKNEVMLTAK 516
ER++I LG+G +G VL C + I AVK ++K S + + EV L K
Sbjct: 22 ERYNIVCMLGKGSFGE----VLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKK 77
Query: 517 LQHVNLIRVLGFCIDS 532
L H N++++ DS
Sbjct: 78 LDHPNIMKLFEILEDS 93
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 11/76 (14%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVI-----AVKKLSKTSTQGFE--EFKNEVMLTAK 516
ER++I LG+G +G VL C + I AVK ++K S + + EV L K
Sbjct: 22 ERYNIVCMLGKGSFGE----VLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKK 77
Query: 517 LQHVNLIRVLGFCIDS 532
L H N++++ DS
Sbjct: 78 LDHPNIMKLFEILEDS 93
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 15/104 (14%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTSTQGFEEF-----KNEVMLTA 515
AT R+ ++G G YG VYK P G +A+K + + G EV L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 516 KL---QHVNLIRVLGFC----IDSEERM-LIYEYMPNKSLDCYL 551
+L +H N++R++ C D E ++ L++E++ ++ L YL
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL 109
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 37/86 (43%), Gaps = 16/86 (18%)
Query: 431 SNTRANNETEAGDFNRNVPNLRVYSLADIE-AATERFSIRNK-------LGEGGYGPVYK 482
SN AN E F R L + D+E +ATE +I NK L G+G
Sbjct: 4 SNIEANESEEVRQFRRLFAQL---AGDDMEVSATELMNILNKVVTRHPDLKTDGFG---- 56
Query: 483 GVLPCGEVIAVKKLSKTSTQGFEEFK 508
+ C ++AV T GFEEFK
Sbjct: 57 -IDTCRSMVAVMDSDTTGKLGFEEFK 81
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 13/102 (12%)
Query: 462 ATERFSIRNKLGEGGYGPVYKG--VLPCGEVIAVKKLS-KTSTQGFE-EFKNEVMLTAKL 517
A +++ ++GEG YG V+K + G +A+K++ +T +G EV + L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 518 ---QHVNLIRVLGFC----IDSEERM-LIYEYMPNKSLDCYL 551
+H N++R+ C D E ++ L++E++ ++ L YL
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL 109
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 13/102 (12%)
Query: 462 ATERFSIRNKLGEGGYGPVYKG--VLPCGEVIAVKKLS-KTSTQGFE-EFKNEVMLTAKL 517
A +++ ++GEG YG V+K + G +A+K++ +T +G EV + L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 518 ---QHVNLIRVLGFC----IDSEERM-LIYEYMPNKSLDCYL 551
+H N++R+ C D E ++ L++E++ ++ L YL
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL 109
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 13/102 (12%)
Query: 462 ATERFSIRNKLGEGGYGPVYKG--VLPCGEVIAVKKLS-KTSTQGFE-EFKNEVMLTAKL 517
A +++ ++GEG YG V+K + G +A+K++ +T +G EV + L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 518 ---QHVNLIRVLGFC----IDSEERM-LIYEYMPNKSLDCYL 551
+H N++R+ C D E ++ L++E++ ++ L YL
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL 109
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 17/96 (17%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 4 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 59
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYM 542
EV+L K+ +IR+L + + +LI E M
Sbjct: 60 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERM 95
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVY------KGVLPCGEVIAVKKLSKTSTQGFEEFKN 509
LAD A + I LGEG +G V G ++I K L+K+ QG +
Sbjct: 1 LAD-GAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIER 57
Query: 510 EVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLD 548
E+ L+H ++I++ +E +++ EY N+ D
Sbjct: 58 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD 96
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 466 FSIRNKLGEGGYGPVY------KGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
+ I LGEG +G V G ++I K L+K+ QG + E+ L+H
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLRH 63
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLD 548
++I++ +E +++ EY N+ D
Sbjct: 64 PHIIKLYDVIKSKDEIIMVIEYAGNELFD 92
>pdb|3CO4|A Chain A, Crystal Structure Of A Chitinase From Bacteroides
Thetaiotaomicron
pdb|3FND|A Chain A, Crystal Structure Of A Chitinase From Bacteroides
Thetaiotaomicron
Length = 312
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 89/249 (35%), Gaps = 44/249 (17%)
Query: 27 IRVGYLNLSE---VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTV 83
+ +GYL L + S I + TH+ S A + + +L++ +I +T
Sbjct: 5 VVIGYLALDDWEFESLFPTIEWKYLTHINASFARVKADG---TLNINPVRKRIESVRETA 61
Query: 84 KKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAP 143
K N I L+ + +++ + + RK I I + Y G D +
Sbjct: 62 HKHNVKILISLAKNSPGE-----FTTAINDPKARKELIQQIIAFTKEYKLDGFDIDYEE- 115
Query: 144 NTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLN 203
+D W SLL+ + N L + N
Sbjct: 116 ------------YDNW-----------DKNFPSLLVFARGLYLAKEKNX--LXTCAVNSR 150
Query: 204 WIHAVTA--SYYEPVSTNFTAPPAALYGSISGRFARSTDQV--LKAWIER-GLSADKLVM 258
W++ T Y++ + N + + + A D V LK W E+ S K+V
Sbjct: 151 WLNYGTEWEQYFDYI--NLXSYDRGAFTDKPVQHASYDDFVKDLKYWNEQCRASKSKIVG 208
Query: 259 CLPFYGYAW 267
LPFYGY+W
Sbjct: 209 GLPFYGYSW 217
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 10/102 (9%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E ++ ++ LGEG +G V K +AVK L +T+ + +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
+ M+ +H N+I +LG C +I EY +L YL
Sbjct: 91 MEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYL 132
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQGFEEFKN------EVMLTAK 516
+R+ IR+ +G G YG V + + V+A+KK+ + FE+ + E+ + +
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRV----FEDLIDCKRILREIAILNR 108
Query: 517 LQHVNLIRVLGFCI 530
L H ++++VL I
Sbjct: 109 LNHDHVVKVLDIVI 122
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 10/102 (9%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E ++ ++ LGEG +G V K +AVK L +T+ + +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
+ M+ +H N+I +LG C +I EY +L YL
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTSTQGFEEFKN-----EV 511
D+++ +R+ + LGEG + VYK +++A+KK+ ++ N E+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 512 MLTAKLQHVNLIRVLGFCIDSEERMLIYEYM 542
L +L H N+I +L L++++M
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFM 94
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 10/102 (9%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E ++ ++ LGEG +G V K +AVK L +T+ + +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
+ M+ +H N+I +LG C +I EY +L YL
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 10/102 (9%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E ++ ++ LGEG +G V K +AVK L +T+ + +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
+ M+ +H N+I +LG C +I EY +L YL
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 12/76 (15%)
Query: 472 LGEGGYGPVYKGVLPC-GEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCI 530
+G GG+G V+K G+ +K++ + E+ + EV AKL HVN++ G C
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNG-CW 73
Query: 531 DSEERMLIYEYMPNKS 546
D ++Y P S
Sbjct: 74 DG------FDYDPETS 83
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 10/102 (9%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E ++ ++ LGEG +G V K +AVK L +T+ + +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
+ M+ +H N+I +LG C +I EY +L YL
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 10/102 (9%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E ++ ++ LGEG +G V K +AVK L +T+ + +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSE 90
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
+ M+ +H N+I +LG C +I EY +L YL
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 12/78 (15%)
Query: 472 LGEGGYGPVYKGVLPC-GEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCI 530
+G GG+G V+K G+ ++++ + E+ + EV AKL HVN++ G C
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYNN----EKAEREVKALAKLDHVNIVHYNG-CW 74
Query: 531 DSEERMLIYEYMPNKSLD 548
D ++Y P S D
Sbjct: 75 DG------FDYDPETSDD 86
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 13/84 (15%)
Query: 471 KLGEGGYGPVYKGVLPC-------GEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
K+GEG G V C G +AVK + Q E NEV++ QH N++
Sbjct: 52 KIGEGSTGIV------CLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVV 105
Query: 524 RVLGFCIDSEERMLIYEYMPNKSL 547
+ + EE ++ E++ +L
Sbjct: 106 EMYKSYLVGEELWVLMEFLQGGAL 129
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS--KTSTQGFEEFKNEVMLTAKLQH 519
T+ + + +LG+G + V + + +P G+ A K ++ K S + ++ + E + L+H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 520 VNLIRV 525
N++R+
Sbjct: 63 PNIVRL 68
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS--KTSTQGFEEFKNEVMLTAKLQH 519
T+ + + +LG+G + V + + +P G+ A K ++ K S + ++ + E + L+H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 520 VNLIRV 525
N++R+
Sbjct: 63 PNIVRL 68
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHVN 521
E F+ +++G+G +G VYKG+ EV+A+K + + + E+ + E+ + ++
Sbjct: 19 ELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 78
Query: 522 LIRVLGFCIDSEERMLIYEYM 542
+ R G + S + +I EY+
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYL 99
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 10/102 (9%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E ++ ++ LGEG +G V K +AVK L +T+ + +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
+ M+ +H N+I +LG C +I EY +L YL
Sbjct: 91 MEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYL 132
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 18/110 (16%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN- 509
+ + E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNG 56
Query: 510 -----EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
EV+L K+ +IR+L + + +LI E P D + F
Sbjct: 57 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDF 105
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 18/110 (16%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN- 509
+ + E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNG 56
Query: 510 -----EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
EV+L K+ +IR+L + + +LI E P D + F
Sbjct: 57 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDF 105
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 18/106 (16%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 19 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 74
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
EV+L K+ +IR+L + + +LI E P D + F
Sbjct: 75 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDF 119
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 18/106 (16%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 88
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
EV+L K+ +IR+L + + +LI E P D + F
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDF 133
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 42/100 (42%), Gaps = 8/100 (8%)
Query: 460 EAATERFSIRNKLGEGGYGPVYK----GVLPCGEVI--AVKKL-SKTSTQGFEEFKNEV- 511
E E LG G +G V G+ G I AVK L K + E +E+
Sbjct: 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELK 100
Query: 512 MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
M+T H N++ +LG C S LI+EY L YL
Sbjct: 101 MMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYL 140
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 18/106 (16%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 19 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 74
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
EV+L K+ +IR+L + + +LI E P D + F
Sbjct: 75 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDF 119
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 18/106 (16%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 88
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
EV+L K+ +IR+L + + +LI E P D + F
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDF 133
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 18/106 (16%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 87
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
EV+L K+ +IR+L + + +LI E P D + F
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDF 132
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 18/106 (16%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 88
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
EV+L K+ +IR+L + + +LI E P D + F
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDF 133
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 18/106 (16%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 87
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
EV+L K+ +IR+L + + +LI E P D + F
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDF 132
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 18/110 (16%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN- 509
+ + E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNG 56
Query: 510 -----EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
EV+L K+ +IR+L + + +LI E P D + F
Sbjct: 57 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDF 105
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 18/106 (16%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 20 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 75
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
EV+L K+ +IR+L + + +LI E P D + F
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDF 120
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 18/106 (16%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 20 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 75
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
EV+L K+ +IR+L + + +LI E P D + F
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDF 120
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 18/106 (16%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 47 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 102
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
EV+L K+ +IR+L + + +LI E P D + F
Sbjct: 103 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDF 147
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 18/106 (16%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 4 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 59
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
EV+L K+ +IR+L + + +LI E P D + F
Sbjct: 60 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDF 104
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 18/106 (16%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 87
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
EV+L K+ +IR+L + + +LI E P D + F
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDF 132
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 18/106 (16%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 87
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
EV+L K+ +IR+L + + +LI E P D + F
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDF 132
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 18/106 (16%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 88
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
EV+L K+ +IR+L + + +LI E P D + F
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDF 133
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 18/106 (16%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 94
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
EV+L K+ +IR+L + + +LI E P D + F
Sbjct: 95 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDF 139
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 18/106 (16%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 20 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 75
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
EV+L K+ +IR+L + + +LI E P D + F
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDF 120
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 18/106 (16%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 47 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 102
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
EV+L K+ +IR+L + + +LI E P D + F
Sbjct: 103 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDF 147
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 10/102 (9%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E ++ ++ LGEG +G V K +AVK L +T+ + +E
Sbjct: 77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 136
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
+ M+ +H N+I +LG C +I EY +L YL
Sbjct: 137 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 178
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 18/106 (16%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 3 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 58
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
EV+L K+ +IR+L + + +LI E P D + F
Sbjct: 59 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDF 103
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 18/106 (16%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 52 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 107
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
EV+L K+ +IR+L + + +LI E P D + F
Sbjct: 108 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDF 152
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 29.3 bits (64), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQG 503
+A++ A ++++ + G YG V GV G +A+K++ T + G
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDG 61
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 18/110 (16%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN- 509
+ + E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 23 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNG 78
Query: 510 -----EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF 552
EV+L K+ +IR+L + + +LI E P D + F
Sbjct: 79 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDF 127
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 10/102 (9%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E ++ ++ LGEG +G V K +AVK L +T+ + +E
Sbjct: 18 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 77
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
+ M+ +H N+I +LG C +I EY +L YL
Sbjct: 78 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 119
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 471 KLGEGGYGPVYKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
K+GEG G V G+ +AVKK+ Q E NEV++ H N++ +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 530 IDSEERMLIYEYMPNKSL 547
+ +E ++ E++ +L
Sbjct: 112 LVGDELWVVMEFLEGGAL 129
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 10/102 (9%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E ++ ++ LGEG +G V K +AVK L +T+ + +E
Sbjct: 23 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 82
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
+ M+ +H N+I +LG C +I EY +L YL
Sbjct: 83 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 124
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQG 503
+A++ A ++++ + G YG V GV G +A+K++ T + G
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDG 61
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 10/102 (9%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E ++ ++ LGEG +G V K +AVK L +T+ + +E
Sbjct: 20 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 79
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
+ M+ +H N+I +LG C +I EY +L YL
Sbjct: 80 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 121
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 10/102 (9%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E +R + LGEG +G V K +AVK L +T+ + +E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
+ M+ +H N+I +LG C +I EY +L YL
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 125
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 28.9 bits (63), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 48/117 (41%), Gaps = 7/117 (5%)
Query: 442 GDFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVL-----PCG-EVIAVKK 495
G + +V ++ E + + LGEG +G V K G +AVK
Sbjct: 1 GPLSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKM 60
Query: 496 LSK-TSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
L + S + +E + ++ H ++I++ G C +LI EY SL +L
Sbjct: 61 LKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 28.9 bits (63), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 10/102 (9%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E +R + LGEG +G V K +AVK L +T+ + +E
Sbjct: 17 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 76
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
+ M+ +H N+I +LG C +I EY +L YL
Sbjct: 77 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 118
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 28.9 bits (63), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG G V V E +AVK + K + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 521 NLIRVLGFCIDSEERMLIYEY 541
N+++ G + + L EY
Sbjct: 65 NVVKFYGHRREGNIQYLFLEY 85
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 28.9 bits (63), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 10/102 (9%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E +R + LGEG +G V K +AVK L +T+ + +E
Sbjct: 16 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 75
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
+ M+ +H N+I +LG C +I EY +L YL
Sbjct: 76 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 117
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
+ + +G G +G V K +V A+K++ S + + F E+ +++ H N++
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWRAKDV-AIKQIESESER--KAFIVELRQLSRVNHPNIV 64
Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYLFG 553
++ G C++ L+ EY SL L G
Sbjct: 65 KLYGACLNP--VCLVMEYAEGGSLYNVLHG 92
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 28.9 bits (63), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 10/102 (9%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E +R + LGEG +G V K +AVK L +T+ + +E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
+ M+ +H N+I +LG C +I EY +L YL
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 125
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 28.9 bits (63), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 7/117 (5%)
Query: 442 GDFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKK 495
G + +V ++ E + + LGEG +G V K +AVK
Sbjct: 1 GPLSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKM 60
Query: 496 LSK-TSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
L + S + +E + ++ H ++I++ G C +LI EY SL +L
Sbjct: 61 LKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 28.9 bits (63), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 10/102 (9%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E +R + LGEG +G V K +AVK L +T+ + +E
Sbjct: 13 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 72
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
+ M+ +H N+I +LG C +I EY +L YL
Sbjct: 73 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 114
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 28.9 bits (63), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
+ + +G G +G V K +V A+K++ S + + F E+ +++ H N++
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWRAKDV-AIKQIESESER--KAFIVELRQLSRVNHPNIV 65
Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYLFG 553
++ G C++ L+ EY SL L G
Sbjct: 66 KLYGACLNP--VCLVMEYAEGGSLYNVLHG 93
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 28.9 bits (63), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 48/117 (41%), Gaps = 7/117 (5%)
Query: 442 GDFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVL-----PCG-EVIAVKK 495
G + +V ++ E + + LGEG +G V K G +AVK
Sbjct: 1 GPLSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKM 60
Query: 496 LSK-TSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
L + S + +E + ++ H ++I++ G C +LI EY SL +L
Sbjct: 61 LKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 28.9 bits (63), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 10/102 (9%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E +R + LGEG +G V K +AVK L +T+ + +E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
+ M+ +H N+I +LG C +I EY +L YL
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 125
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 28.9 bits (63), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 10/102 (9%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E +R + LGEG +G V K +AVK L +T+ + +E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
+ M+ +H N+I +LG C +I EY +L YL
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 125
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 28.9 bits (63), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 10/102 (9%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E +R + LGEG +G V K +AVK L +T+ + +E
Sbjct: 65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 124
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
+ M+ +H N+I +LG C +I EY +L YL
Sbjct: 125 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 166
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 28.9 bits (63), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 10/102 (9%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E +R + LGEG +G V K +AVK L +T+ + +E
Sbjct: 9 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 68
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
+ M+ +H N+I +LG C +I EY +L YL
Sbjct: 69 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 110
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVL----PCGEVIAVKKL--SKTSTQGFEEFKNEVMLTA 515
+ E++ K+GEG +G K +L G +K++ S+ S++ EE + EV + A
Sbjct: 22 SMEKYVRLQKIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLA 78
Query: 516 KLQHVNLIR 524
++H N+++
Sbjct: 79 NMKHPNIVQ 87
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 466 FSIRNKLGEGGYGPVYK-GVLPCGEVIAVKKLS---KTSTQGFEEFKNEVMLTAKLQHVN 521
F I K+G G + VY+ L G +A+KK+ + + E+ L +L H N
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 522 LIRVLGFCIDSEERMLIYE 540
+I+ I+ E ++ E
Sbjct: 94 VIKYYASFIEDNELNIVLE 112
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.133 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,253,415
Number of Sequences: 62578
Number of extensions: 654992
Number of successful extensions: 2492
Number of sequences better than 100.0: 604
Number of HSP's better than 100.0 without gapping: 247
Number of HSP's successfully gapped in prelim test: 357
Number of HSP's that attempted gapping in prelim test: 1975
Number of HSP's gapped (non-prelim): 638
length of query: 570
length of database: 14,973,337
effective HSP length: 104
effective length of query: 466
effective length of database: 8,465,225
effective search space: 3944794850
effective search space used: 3944794850
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)