Query 008334
Match_columns 569
No_of_seqs 442 out of 3043
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 23:45:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008334.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008334hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 9.3E-35 3.2E-39 289.2 30.9 239 254-549 15-273 (284)
2 1dqv_A Synaptotagmin III; beta 100.0 7E-34 2.4E-38 284.2 15.2 239 253-549 15-276 (296)
3 1wfj_A Putative elicitor-respo 99.8 8.8E-21 3E-25 166.4 14.5 124 255-388 7-132 (136)
4 2dmh_A Myoferlin; beta-sandwic 99.8 2.2E-20 7.6E-25 164.7 17.1 128 255-387 4-134 (140)
5 3b7y_A E3 ubiquitin-protein li 99.8 3.6E-20 1.2E-24 166.0 15.7 128 255-386 17-153 (153)
6 1rlw_A Phospholipase A2, CALB 99.8 2.7E-20 9.3E-25 160.9 14.1 120 257-385 2-124 (126)
7 1rlw_A Phospholipase A2, CALB 99.8 2.1E-20 7.3E-25 161.6 13.1 120 443-562 2-125 (126)
8 2ep6_A MCTP2 protein; beta san 99.8 3.4E-20 1.1E-24 162.0 13.0 125 253-386 8-132 (133)
9 3kwu_A MUNC13-1; calcium bindi 99.8 1.9E-19 6.6E-24 160.2 17.2 121 256-385 15-146 (148)
10 2fk9_A Protein kinase C, ETA t 99.8 2.2E-20 7.6E-25 166.2 11.0 117 255-385 26-156 (157)
11 2fk9_A Protein kinase C, ETA t 99.8 8.5E-20 2.9E-24 162.4 14.2 116 441-561 26-156 (157)
12 2dmh_A Myoferlin; beta-sandwic 99.8 2.3E-19 7.8E-24 158.2 16.1 121 442-565 5-136 (140)
13 3m7f_B E3 ubiquitin-protein li 99.8 2.3E-19 8E-24 164.5 16.6 129 255-387 5-142 (176)
14 1gmi_A Protein kinase C, epsil 99.8 1.3E-19 4.3E-24 158.9 12.8 117 256-386 4-133 (136)
15 1wfj_A Putative elicitor-respo 99.8 4.5E-19 1.5E-23 155.4 13.6 120 442-564 8-132 (136)
16 3b7y_A E3 ubiquitin-protein li 99.8 1E-18 3.6E-23 156.4 15.8 121 441-562 17-153 (153)
17 3kwu_A MUNC13-1; calcium bindi 99.8 2.7E-18 9.1E-23 152.8 18.0 115 442-561 15-146 (148)
18 1gmi_A Protein kinase C, epsil 99.8 7.5E-19 2.6E-23 153.9 13.0 117 442-563 4-134 (136)
19 3pyc_A E3 ubiquitin-protein li 99.8 1.1E-18 3.9E-23 152.0 13.6 124 257-384 4-131 (132)
20 3f04_A Synaptotagmin-1; C2A, c 99.8 7.7E-19 2.6E-23 155.3 12.6 111 254-364 30-142 (143)
21 2ep6_A MCTP2 protein; beta san 99.8 9.3E-19 3.2E-23 152.7 12.9 117 441-562 10-132 (133)
22 1rsy_A Synaptotagmin I; calciu 99.8 1.1E-18 3.9E-23 155.9 13.4 111 254-364 38-150 (152)
23 2d8k_A Synaptotagmin VII; exoc 99.8 1E-18 3.5E-23 154.2 12.0 110 255-364 23-135 (141)
24 2b3r_A Phosphatidylinositol-4- 99.8 1.9E-18 6.4E-23 150.9 13.5 109 255-364 17-130 (134)
25 3m7f_B E3 ubiquitin-protein li 99.8 5.5E-18 1.9E-22 155.3 16.8 122 441-563 5-142 (176)
26 2nq3_A Itchy homolog E3 ubiqui 99.8 4.2E-18 1.4E-22 155.0 15.5 125 255-387 33-162 (173)
27 2z0u_A WW domain-containing pr 99.8 3.3E-19 1.1E-23 159.3 8.0 110 254-363 39-154 (155)
28 1rsy_A Synaptotagmin I; calciu 99.8 5.8E-18 2E-22 151.3 15.7 107 443-549 41-151 (152)
29 2d8k_A Synaptotagmin VII; exoc 99.8 3.2E-18 1.1E-22 150.9 13.7 108 443-550 25-137 (141)
30 2bwq_A Regulating synaptic mem 99.8 4.4E-18 1.5E-22 147.6 14.1 104 443-547 17-129 (129)
31 3fdw_A Synaptotagmin-like prot 99.8 3.4E-18 1.2E-22 152.1 13.4 108 443-550 22-136 (148)
32 3pyc_A E3 ubiquitin-protein li 99.8 5.1E-18 1.8E-22 147.8 14.3 117 443-561 4-132 (132)
33 1v27_A Regulating synaptic mem 99.8 2.2E-18 7.6E-23 152.0 12.1 109 443-552 20-137 (141)
34 2z0u_A WW domain-containing pr 99.8 2.1E-18 7.3E-23 154.0 11.6 105 443-547 42-154 (155)
35 2b3r_A Phosphatidylinositol-4- 99.8 7.2E-18 2.5E-22 147.1 13.1 111 441-552 17-134 (134)
36 1rh8_A Piccolo protein; beta-s 99.8 2.4E-18 8.1E-23 152.0 10.1 107 444-550 18-140 (142)
37 3f04_A Synaptotagmin-1; C2A, c 99.8 1E-17 3.4E-22 148.1 14.1 107 442-548 32-142 (143)
38 3fbk_A RGS3, RGP3, regulator o 99.8 9.2E-18 3.2E-22 150.1 13.9 110 442-552 25-141 (153)
39 1a25_A CALB, protein kinase C 99.7 3.4E-18 1.2E-22 152.2 10.9 110 444-554 31-145 (149)
40 2bwq_A Regulating synaptic mem 99.7 4.9E-18 1.7E-22 147.3 11.5 108 254-362 14-128 (129)
41 3rdl_A Protein kinase C alpha 99.7 6.3E-18 2.1E-22 148.3 12.1 109 444-553 16-129 (137)
42 1ugk_A Synaptotagmin IV, KIAA1 99.7 1.5E-17 5.2E-22 146.0 13.7 111 254-364 18-133 (138)
43 1wfm_A Synaptotagmin XIII; C2 99.7 3.1E-17 1.1E-21 143.9 15.5 105 443-550 25-134 (138)
44 3fdw_A Synaptotagmin-like prot 99.7 3.5E-18 1.2E-22 152.0 9.1 112 254-365 19-135 (148)
45 2dmg_A KIAA1228 protein; beta- 99.7 1.1E-17 3.7E-22 147.7 12.1 106 443-549 23-136 (142)
46 2chd_A Rabphilin-3A, exophilin 99.7 1.1E-17 3.7E-22 147.7 11.8 110 255-364 26-140 (142)
47 2dmg_A KIAA1228 protein; beta- 99.7 5.3E-18 1.8E-22 149.7 9.6 110 254-364 20-135 (142)
48 1a25_A CALB, protein kinase C 99.7 1.9E-17 6.4E-22 147.4 13.1 107 257-364 30-139 (149)
49 1ugk_A Synaptotagmin IV, KIAA1 99.7 7.4E-17 2.5E-21 141.6 16.7 109 442-550 20-135 (138)
50 3rdl_A Protein kinase C alpha 99.7 1.2E-17 4.1E-22 146.4 11.5 109 256-365 14-125 (137)
51 2enp_A B/K protein; C2 type 1, 99.7 6.6E-18 2.3E-22 150.0 9.7 111 254-364 22-141 (147)
52 1v27_A Regulating synaptic mem 99.7 7.6E-18 2.6E-22 148.5 9.9 110 255-365 18-134 (141)
53 1wfm_A Synaptotagmin XIII; C2 99.7 1.9E-17 6.4E-22 145.3 12.2 107 255-364 23-132 (138)
54 2r83_A Synaptotagmin-1; C2A-C2 99.7 1E-16 3.4E-21 158.8 18.7 121 443-563 18-148 (284)
55 2q3x_A Regulating synaptic mem 99.7 3.7E-17 1.3E-21 148.9 14.2 105 444-549 30-140 (171)
56 2chd_A Rabphilin-3A, exophilin 99.7 5.6E-17 1.9E-21 143.1 14.9 107 442-548 27-140 (142)
57 2q3x_A Regulating synaptic mem 99.7 1.5E-17 5.3E-22 151.5 11.3 109 256-365 28-140 (171)
58 1tjx_A Similar to synaptotagmi 99.7 9.8E-17 3.3E-21 144.4 16.0 108 443-550 24-149 (159)
59 3fbk_A RGS3, RGP3, regulator o 99.7 3.7E-17 1.3E-21 146.1 12.9 112 253-365 22-138 (153)
60 2enp_A B/K protein; C2 type 1, 99.7 2.6E-17 9E-22 146.1 11.6 107 443-549 25-142 (147)
61 2nq3_A Itchy homolog E3 ubiqui 99.7 3.7E-17 1.3E-21 148.7 12.8 118 442-563 34-162 (173)
62 1rh8_A Piccolo protein; beta-s 99.7 3.5E-18 1.2E-22 150.9 5.2 108 257-364 17-138 (142)
63 3n5a_A Synaptotagmin-7; calciu 99.7 1.1E-16 3.9E-21 140.3 14.9 92 443-534 15-112 (138)
64 1w15_A Synaptotagmin IV; metal 99.7 1.1E-16 3.9E-21 143.0 14.7 91 443-533 29-125 (153)
65 1tjx_A Similar to synaptotagmi 99.7 7.1E-17 2.4E-21 145.3 13.2 111 254-364 21-147 (159)
66 2cm5_A Rabphilin-3A; protein t 99.7 3.1E-16 1E-20 142.2 16.6 106 443-548 36-159 (166)
67 3n5a_A Synaptotagmin-7; calciu 99.7 7.3E-17 2.5E-21 141.6 11.7 97 254-350 12-112 (138)
68 2cm5_A Rabphilin-3A; protein t 99.7 2.1E-16 7.1E-21 143.3 13.9 97 254-350 33-133 (166)
69 1w15_A Synaptotagmin IV; metal 99.7 1.7E-16 5.9E-21 141.8 12.0 108 254-363 26-137 (153)
70 2cjt_A UNC-13 homolog A, MUNC1 99.7 5.9E-16 2E-20 134.1 13.2 118 256-384 3-130 (131)
71 3l9b_A Otoferlin; C2-domain, b 99.7 7.6E-16 2.6E-20 131.1 12.0 120 256-387 19-141 (144)
72 3nsj_A Perforin-1; pore formin 99.6 1.4E-14 4.6E-19 153.8 21.8 169 194-384 310-502 (540)
73 1dqv_A Synaptotagmin III; beta 99.6 2E-15 6.9E-20 150.2 13.7 121 443-563 19-150 (296)
74 3jzy_A Intersectin 2; C2 domai 99.6 1E-15 3.5E-20 164.5 12.4 120 255-385 384-507 (510)
75 3jzy_A Intersectin 2; C2 domai 99.6 2.7E-15 9.4E-20 161.2 14.9 119 441-561 384-507 (510)
76 2cjs_A UNC-13 homolog A, MUNC1 99.6 1E-14 3.5E-19 131.5 12.9 88 255-352 11-99 (167)
77 3l9b_A Otoferlin; C2-domain, b 99.6 2.8E-14 9.7E-19 121.4 13.2 113 444-563 21-141 (144)
78 1cjy_A CPLA2, protein (cytosol 99.6 5E-15 1.7E-19 161.8 9.5 110 254-364 14-126 (749)
79 2cjt_A UNC-13 homolog A, MUNC1 99.5 5.9E-14 2E-18 121.4 12.9 88 442-538 3-92 (131)
80 3nsj_A Perforin-1; pore formin 99.5 9.7E-14 3.3E-18 147.2 15.9 110 442-561 392-503 (540)
81 1djx_A PLC-D1, phosphoinositid 99.5 1.9E-13 6.5E-18 148.3 16.2 124 256-385 495-623 (624)
82 1cjy_A CPLA2, protein (cytosol 99.5 1E-13 3.4E-18 151.5 11.2 113 442-556 16-132 (749)
83 2cjs_A UNC-13 homolog A, MUNC1 99.5 6.6E-13 2.3E-17 119.6 13.7 112 443-563 13-142 (167)
84 1djx_A PLC-D1, phosphoinositid 99.4 1.3E-12 4.3E-17 141.9 16.5 117 442-561 495-623 (624)
85 3bxj_A RAS GTPase-activating p 99.4 2E-14 6.9E-19 152.1 -0.3 125 255-387 8-158 (483)
86 3bxj_A RAS GTPase-activating p 99.4 4.8E-14 1.6E-18 149.2 0.3 120 441-567 8-162 (483)
87 3pfq_A PKC-B, PKC-beta, protei 99.2 1.3E-11 4.3E-16 136.7 10.0 108 257-365 171-281 (674)
88 3pfq_A PKC-B, PKC-beta, protei 99.2 8.4E-11 2.9E-15 130.1 13.0 106 443-549 171-281 (674)
89 3qr0_A Phospholipase C-beta (P 99.1 6.3E-10 2.2E-14 123.0 14.9 116 257-386 649-771 (816)
90 3ohm_B 1-phosphatidylinositol- 99.1 4.3E-10 1.5E-14 124.9 13.6 116 257-386 724-845 (885)
91 2zkm_X 1-phosphatidylinositol- 99.1 7.3E-10 2.5E-14 123.2 15.3 115 256-384 676-797 (799)
92 2zkm_X 1-phosphatidylinositol- 99.1 1E-09 3.5E-14 121.9 14.6 110 442-561 676-798 (799)
93 3ohm_B 1-phosphatidylinositol- 99.0 1E-09 3.6E-14 121.9 13.9 110 443-562 724-845 (885)
94 3qr0_A Phospholipase C-beta (P 99.0 1.9E-09 6.5E-14 119.2 15.2 109 443-561 649-770 (816)
95 1yrk_A NPKC-delta, protein kin 99.0 6.7E-09 2.3E-13 85.6 14.4 113 442-561 4-124 (126)
96 1yrk_A NPKC-delta, protein kin 98.9 1.5E-08 5.1E-13 83.6 13.5 113 257-385 5-124 (126)
97 2enj_A NPKC-theta, protein kin 98.9 9.5E-09 3.3E-13 85.8 11.9 114 442-562 8-130 (138)
98 2enj_A NPKC-theta, protein kin 98.8 2.3E-08 7.8E-13 83.6 11.1 113 257-385 9-129 (138)
99 3l4c_A Dedicator of cytokinesi 93.3 1.5 5.3E-05 39.9 13.2 55 293-347 77-137 (220)
100 2yrb_A Protein fantom; beta sa 91.1 2 6.8E-05 36.9 10.6 126 255-386 15-150 (156)
101 2wxf_A Phosphatidylinositol-4, 87.2 3.2 0.00011 46.7 11.5 89 443-534 216-324 (940)
102 3l4c_A Dedicator of cytokinesi 85.5 14 0.00049 33.5 12.9 56 478-533 77-139 (220)
103 2yrb_A Protein fantom; beta sa 84.5 5.2 0.00018 34.3 9.0 119 442-562 16-150 (156)
104 3hhm_A Phosphatidylinositol-4, 82.4 6.9 0.00024 44.4 11.4 90 443-534 354-455 (1091)
105 2wxf_A Phosphatidylinositol-4, 80.2 7.6 0.00026 43.7 10.8 91 257-350 216-324 (940)
106 1e7u_A Phosphatidylinositol 3- 73.6 15 0.0005 41.5 10.7 91 443-534 217-330 (961)
107 3hhm_A Phosphatidylinositol-4, 69.3 28 0.00095 39.6 11.6 92 257-350 354-455 (1091)
108 2y3a_A Phosphatidylinositol-4, 66.3 5.2 0.00018 45.6 5.1 89 443-534 352-470 (1092)
109 1e7u_A Phosphatidylinositol 3- 55.8 37 0.0013 38.2 9.5 93 258-351 218-331 (961)
110 2y3a_A Phosphatidylinositol-4, 51.2 15 0.00052 41.9 5.5 91 257-350 352-470 (1092)
111 2klu_A T-cell surface glycopro 39.5 6.7 0.00023 27.8 0.2 35 3-37 11-46 (70)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=9.3e-35 Score=289.18 Aligned_cols=239 Identities=28% Similarity=0.461 Sum_probs=203.0
Q ss_pred cCccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCCCCeEEeeecCCCCCCeeccEEEEEEecC--CCcEEEEEEEEC
Q 008334 254 LKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRIYDD 331 (569)
Q Consensus 254 ~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~--~~~~L~i~v~d~ 331 (569)
....|.|.|+|++|++|+.+|..|.+||||++++++...+.++|+++++++||+|||+|.|.+... ....|.|+|||+
T Consensus 15 ~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~ 94 (284)
T 2r83_A 15 DFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDF 94 (284)
T ss_dssp ETTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEEC
T ss_pred ECCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEEC
Confidence 356799999999999999999889999999999986666789999999999999999999998643 457999999999
Q ss_pred CCCCCCcceEEEEEEccccCCCceeEEEEEccccccccCCCcceeEEEEEEEEEecCCCCCcCCCCCCCCChhhHHHHhh
Q 008334 332 EGIQSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQRDTKYRGQVHLELLYCPFGMENVFTNPFAPNFSMTSLEKVLT 411 (569)
Q Consensus 332 ~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (569)
+.+++|++||++.++|.++..+...+.|++|..... ......|++.+.+.|.|
T Consensus 95 d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~--~~~~~~G~i~l~l~~~p------------------------- 147 (284)
T 2r83_A 95 DRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEK--EEQEKLGDICFSLRYVP------------------------- 147 (284)
T ss_dssp CSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSS--CCCCCCCEEEEEEEEET-------------------------
T ss_pred CCCCCCceeEEEEEcchhcccCCcceeEEEeecccc--ccccccccEEEEEEecC-------------------------
Confidence 999899999999999999988888899999975321 12346799999998864
Q ss_pred cCcccccCCCCCccccccchhhhccccccccceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCCC---eeEeecccCCC
Q 008334 412 NGEKALKSGANGTEAIELEKDASQKRREVIIRGVLSVTVILAENLPASDLMGKADPYVVLTMKKSE---TRNKTRVVNDC 488 (569)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~~---~~~~T~~~~~t 488 (569)
..+.|.|+|++|++|+..+..|.+||||++++.... .+++|+++++|
T Consensus 148 ------------------------------~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t 197 (284)
T 2r83_A 148 ------------------------------TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNT 197 (284)
T ss_dssp ------------------------------TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSC
T ss_pred ------------------------------cCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCC
Confidence 237899999999999999989999999999995322 46899999999
Q ss_pred CCCeeceEEEEEeccCC--CCEEEEEEEECCCCCC-ceeEEEEEecceeee------------cceEeEEEEcCCC
Q 008334 489 LNPIWNQTFDFVVEDGL--HDMLIAEVWDHDTFGK-DYMGRCILTLTRVIL------------EGEYTDCFELDGT 549 (569)
Q Consensus 489 ~nP~w~e~f~f~v~~~~--~~~l~i~V~d~~~~~~-d~lG~~~i~l~~l~~------------~~~~~~w~~L~~~ 549 (569)
.||+|||+|.|.+.... ...|.|+|||++..++ ++||++.|+++.+.. +....+||+|.+.
T Consensus 198 ~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 198 LNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 273 (284)
T ss_dssp SSCEEEEEEEEECCTTTGGGEEEEEEEEECCSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBCH
T ss_pred CCCEEceeEEEeCCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCCc
Confidence 99999999999987432 4579999999999875 799999999986321 2345899999864
No 2
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=100.00 E-value=7e-34 Score=284.16 Aligned_cols=239 Identities=30% Similarity=0.438 Sum_probs=196.5
Q ss_pred ccCccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCCCCeEEeeecCCCCCCeeccEEEEEEecC--CCcEEEEEEEE
Q 008334 253 ELKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRIYD 330 (569)
Q Consensus 253 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~--~~~~L~i~v~d 330 (569)
+....|.|.|+|++|++|+.+|..|.+||||++++.+.+.+.++|+++++++||+|||+|.|.+... ....|.|+|||
T Consensus 15 y~~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d 94 (296)
T 1dqv_A 15 YLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYD 94 (296)
T ss_dssp CCSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEE
Confidence 3356799999999999999999999999999999976567889999999999999999999998643 34589999999
Q ss_pred CCCCCCCcceEEEEEE-ccccCC-CceeEEEEEccccccccCCCcceeEEEEEEEEEecCCCCCcCCCCCCCCChhhHHH
Q 008334 331 DEGIQSSELIGCAQVR-LCELEP-GKVKDVWLKLVKDLDVQRDTKYRGQVHLELLYCPFGMENVFTNPFAPNFSMTSLEK 408 (569)
Q Consensus 331 ~~~~~~d~~iG~~~i~-l~~l~~-~~~~~~~~~L~~~~~~~~~~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~ 408 (569)
++.+++|++||++.++ +.++.. ......|++|.... ......|+|.+.+.|.|
T Consensus 95 ~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~---~~~~~~G~i~vsl~y~~---------------------- 149 (296)
T 1dqv_A 95 FDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGG---SEKADLGELNFSLCYLP---------------------- 149 (296)
T ss_dssp CCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCS---SCCSCCCEEEEEEEEET----------------------
T ss_pred cCCCCCCceEEEEEeccccccccCCccceeeecccccc---ccccccceEEEEEEecc----------------------
Confidence 9999999999999996 444432 33456799986432 23456799999999864
Q ss_pred HhhcCcccccCCCCCccccccchhhhccccccccceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCC---CeeEeeccc
Q 008334 409 VLTNGEKALKSGANGTEAIELEKDASQKRREVIIRGVLSVTVILAENLPASDLMGKADPYVVLTMKKS---ETRNKTRVV 485 (569)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~---~~~~~T~~~ 485 (569)
..+.|.|+|++|++|+..+..|.+||||++++... ..+++|+++
T Consensus 150 ---------------------------------~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~ 196 (296)
T 1dqv_A 150 ---------------------------------TAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIK 196 (296)
T ss_dssp ---------------------------------TTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCC
T ss_pred ---------------------------------ccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceeccee
Confidence 23789999999999999999999999999999631 257899999
Q ss_pred CCCCCCeeceEEEEEeccC--CCCEEEEEEEECCCCCC-ceeEEEEEecceeee-------------cceEeEEEEcCCC
Q 008334 486 NDCLNPIWNQTFDFVVEDG--LHDMLIAEVWDHDTFGK-DYMGRCILTLTRVIL-------------EGEYTDCFELDGT 549 (569)
Q Consensus 486 ~~t~nP~w~e~f~f~v~~~--~~~~l~i~V~d~~~~~~-d~lG~~~i~l~~l~~-------------~~~~~~w~~L~~~ 549 (569)
+++.||+|||.|.|.+... ....|.|+|||++..++ ++||++.|++.++.. +....+|++|.+.
T Consensus 197 ~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~~ 276 (296)
T 1dqv_A 197 KNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADPHGREHWAEMLANPRKPVEHWHQLVEE 276 (296)
T ss_dssp CSCSSCEEEECCCCCCCSGGGGSCCCCCEEEECCSSSCCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCSCSCCCCBBC
T ss_pred cCCCCCeECceEEEEcCHHHccCcEEEEEEEeCCCCCCCceEEEEEECCccCCchhHHHHHHHHhCCCCceeEeeeccCc
Confidence 9999999999999998743 24579999999999876 799999999987643 2234688888654
No 3
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.85 E-value=8.8e-21 Score=166.38 Aligned_cols=124 Identities=34% Similarity=0.595 Sum_probs=110.8
Q ss_pred CccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCCCCeEEeeecC-CCCCCeeccEEEEEEecCCCcEEEEEEEECCC
Q 008334 255 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTIN-NDLNPIWNEHFEFIVEDESTQHLVVRIYDDEG 333 (569)
Q Consensus 255 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~-~t~nP~wne~f~f~v~~~~~~~L~i~v~d~~~ 333 (569)
.+.|.|+|+|++|++|+..+..|.+||||+++++ .+.++|++++ ++.||+|||+|.|.+.+ ....|.|+|||++.
T Consensus 7 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~---~~~~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~V~d~~~ 82 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCR---TQDQKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAKIFDKDV 82 (136)
T ss_dssp CCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESS---SCEEECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEEECCSSS
T ss_pred CCcEEEEEEEEeccCCCCcccCCCcCceEEEEEC---CccceeEeccCCCCCCccCcEEEEEECC-CCCEEEEEEEECCC
Confidence 5789999999999999999988999999999997 5678999998 89999999999999986 56689999999999
Q ss_pred CCCCcceEEEEEEcccc-CCCceeEEEEEccccccccCCCcceeEEEEEEEEEecC
Q 008334 334 IQSSELIGCAQVRLCEL-EPGKVKDVWLKLVKDLDVQRDTKYRGQVHLELLYCPFG 388 (569)
Q Consensus 334 ~~~d~~iG~~~i~l~~l-~~~~~~~~~~~L~~~~~~~~~~~~~G~l~l~l~~~p~~ 388 (569)
+++|++||++.+++.++ ..+.....|++|. ..++..|+|+++++|.|.+
T Consensus 83 ~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~------~~~~~~G~i~l~l~~~p~~ 132 (136)
T 1wfj_A 83 GTEDDAVGEATIPLEPVFVEGSIPPTAYNVV------KDEEYKGEIWVALSFKPSG 132 (136)
T ss_dssp CTTTCCSEEEEEESHHHHHHSEEEEEEEEEE------ETTEEEEEEEEEEEEEECC
T ss_pred CCCCceEEEEEEEHHHhccCCCCCcEEEEee------cCCccCEEEEEEEEEEeCC
Confidence 98999999999999999 4566678999986 2457899999999999854
No 4
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=2.2e-20 Score=164.67 Aligned_cols=128 Identities=29% Similarity=0.475 Sum_probs=109.9
Q ss_pred CccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCCCCeEEeeecCCCCCCeeccEEEEEEecC---CCcEEEEEEEEC
Q 008334 255 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDE---STQHLVVRIYDD 331 (569)
Q Consensus 255 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~---~~~~L~i~v~d~ 331 (569)
...|.|.|+|++|++|+..+. |.+||||++++. .++++|++++++.||+|||+|.|.+... ....|.|+|||+
T Consensus 4 ~~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~---~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~ 79 (140)
T 2dmh_A 4 GSSGMLRVIVESASNIPKTKF-GKPDPIVSVIFK---DEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDF 79 (140)
T ss_dssp CBCCEEEEEEEEEESCCCCSS-SCCCEEEEEECS---SCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEET
T ss_pred CCCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEEC---CEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEEC
Confidence 356999999999999999998 999999999997 5789999999999999999999999753 457899999999
Q ss_pred CCCCCCcceEEEEEEccccCCCceeEEEEEccccccccCCCcceeEEEEEEEEEec
Q 008334 332 EGIQSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQRDTKYRGQVHLELLYCPF 387 (569)
Q Consensus 332 ~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~G~l~l~l~~~p~ 387 (569)
+..++|++||++.+++.++..+...+.|+++.+-.. .......|+|++++.|.|.
T Consensus 80 d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~-~~~~~~~G~l~l~~~~~p~ 134 (140)
T 2dmh_A 80 ETIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLN-EKGQDTGATIDLVIGYDPP 134 (140)
T ss_dssp TCSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEEC-TTCCEEEEEEEEEEEECCC
T ss_pred CCCCCCceEEEEEEEHHHhccCCCceeEEeeeeccC-CCCCCCCCEEEEEEEEECC
Confidence 999999999999999999988888889988322111 1233567999999999873
No 5
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.84 E-value=3.6e-20 Score=165.97 Aligned_cols=128 Identities=25% Similarity=0.485 Sum_probs=103.6
Q ss_pred CccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCCC---CeEEeeecCCCCCCeeccEEEEEEecCCCcEEEEEEEEC
Q 008334 255 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPE---KTKKSKTINNDLNPIWNEHFEFIVEDESTQHLVVRIYDD 331 (569)
Q Consensus 255 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~---~~~kT~~~~~t~nP~wne~f~f~v~~~~~~~L~i~v~d~ 331 (569)
...|.|+|+|++|++|+..+..|.+||||++++.+... +.++|++++++.||+|||+|.|.+... ...|.|+|||+
T Consensus 17 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~l~~~V~d~ 95 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ-QHRLLFEVFDE 95 (153)
T ss_dssp TTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT-TCEEEEEEEEC
T ss_pred CCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCC-CCEEEEEEEEC
Confidence 57899999999999999999889999999999984332 578999999999999999999999754 56899999999
Q ss_pred CCCCCCcceEEEEEEccccCCCcee------EEEEEccccccccCCCcceeEEEEEEEEEe
Q 008334 332 EGIQSSELIGCAQVRLCELEPGKVK------DVWLKLVKDLDVQRDTKYRGQVHLELLYCP 386 (569)
Q Consensus 332 ~~~~~d~~iG~~~i~l~~l~~~~~~------~~~~~L~~~~~~~~~~~~~G~l~l~l~~~p 386 (569)
+..++|++||++.+++.++..+... ..|++|.+.. ...+..|+|+++++|.|
T Consensus 96 d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~---~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 96 NRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRS---HKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp CSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSS---TTCCCCSEEEEEEEECC
T ss_pred CCCcCCCeeEEEEEEHHHcccCCCccccccccccccccccc---CCCCcceEEEEEEEEeC
Confidence 9999999999999999999765432 5899996532 23467899999999975
No 6
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.84 E-value=2.7e-20 Score=160.92 Aligned_cols=120 Identities=27% Similarity=0.525 Sum_probs=104.9
Q ss_pred cEEEEEEEEEeecccc---CCCCCCCCcEEEEEEecCCCCeEEeeecCCCCCCeeccEEEEEEecCCCcEEEEEEEECCC
Q 008334 257 VGTLEVKLVQAKGLTN---KDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDESTQHLVVRIYDDEG 333 (569)
Q Consensus 257 ~g~L~V~v~~a~~L~~---~d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~~~~L~i~v~d~~~ 333 (569)
.|.|.|+|++|++|+. .+..|.+||||++++++.+.++++|++++++.||+|||+|.|.+.......|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 5899999999999998 4667899999999998544578999999999999999999999976667799999999998
Q ss_pred CCCCcceEEEEEEccccCCCceeEEEEEccccccccCCCcceeEEEEEEEEE
Q 008334 334 IQSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQRDTKYRGQVHLELLYC 385 (569)
Q Consensus 334 ~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~G~l~l~l~~~ 385 (569)
. +|++||++.++|.++..+...+.|++|.+ ...|.|++.++..
T Consensus 82 ~-~~~~iG~~~i~l~~l~~~~~~~~~~~L~~--------~~~g~i~~~le~~ 124 (126)
T 1rlw_A 82 V-MDETLGTATFTVSSMKVGEKKEVPFIFNQ--------VTEMVLEMSLEVA 124 (126)
T ss_dssp S-CCEEEEEEEEEGGGSCTTCEEEEEEEETT--------TEEEEEEEEEECC
T ss_pred C-CCceeEEEEEEHHHccCCCcEEEEEEcCC--------CceEEEEEEEEeC
Confidence 7 48999999999999999999999999842 4567888877654
No 7
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.83 E-value=2.1e-20 Score=161.57 Aligned_cols=120 Identities=23% Similarity=0.454 Sum_probs=106.6
Q ss_pred ceEEEEEEEEeEcCCCC---CCCCCCCcEEEEEEeCC-CeeEeecccCCCCCCeeceEEEEEeccCCCCEEEEEEEECCC
Q 008334 443 RGVLSVTVILAENLPAS---DLMGKADPYVVLTMKKS-ETRNKTRVVNDCLNPIWNQTFDFVVEDGLHDMLIAEVWDHDT 518 (569)
Q Consensus 443 ~~~L~v~v~~a~~L~~~---~~~g~~dpyv~v~l~~~-~~~~~T~~~~~t~nP~w~e~f~f~v~~~~~~~l~i~V~d~~~ 518 (569)
.+.|.|+|++|++|+.. +..|.+||||++++++. ..+++|++++++.||+|||+|.|.+.......|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 48899999999999984 56688999999999753 368899999999999999999999976667899999999998
Q ss_pred CCCceeEEEEEecceeeecceEeEEEEcCCCCCeEEEEEEEEee
Q 008334 519 FGKDYMGRCILTLTRVILEGEYTDCFELDGTKSGKLKLHLKWMP 562 (569)
Q Consensus 519 ~~~d~lG~~~i~l~~l~~~~~~~~w~~L~~~~~G~i~l~~~~~p 562 (569)
.++++||++.++|.++..+.....|++|.+.+.|.|+++++..|
T Consensus 82 ~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~g~i~~~le~~~ 125 (126)
T 1rlw_A 82 VMDETLGTATFTVSSMKVGEKKEVPFIFNQVTEMVLEMSLEVAS 125 (126)
T ss_dssp SCCEEEEEEEEEGGGSCTTCEEEEEEEETTTEEEEEEEEEECCC
T ss_pred CCCceeEEEEEEHHHccCCCcEEEEEEcCCCceEEEEEEEEeCC
Confidence 87789999999999998878889999999988888888887655
No 8
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.83 E-value=3.4e-20 Score=161.95 Aligned_cols=125 Identities=28% Similarity=0.526 Sum_probs=109.1
Q ss_pred ccCccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCCCCeEEeeecCCCCCCeeccEEEEEEecCCCcEEEEEEEECC
Q 008334 253 ELKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDESTQHLVVRIYDDE 332 (569)
Q Consensus 253 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~~~~L~i~v~d~~ 332 (569)
+..+.|.|.|+|++|++|+..+..|.+||||+++++ .+.++|++++++.||+|||+|.|.+.+. .+.|.|+|||++
T Consensus 8 ~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~---~~~~kT~~~~~t~nP~wne~f~f~~~~~-~~~l~i~V~d~d 83 (133)
T 2ep6_A 8 DVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELG---NDRLQTHTVYKNLNPEWNKVFTFPIKDI-HDVLEVTVFDED 83 (133)
T ss_dssp SCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEET---TEEEECCCCSSCSSCCCCEEEEEEESCT-TCEEEEEEEEEE
T ss_pred ccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEEC---CEEEEeeeecCCCCCccccEEEEEecCC-CCEEEEEEEECC
Confidence 447889999999999999999989999999999997 5688999999999999999999999864 568999999999
Q ss_pred CCCCCcceEEEEEEccccCCCceeEEEEEccccccccCCCcceeEEEEEEEEEe
Q 008334 333 GIQSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQRDTKYRGQVHLELLYCP 386 (569)
Q Consensus 333 ~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~G~l~l~l~~~p 386 (569)
..++|++||++.+++.++..+. ..|++|.... ..+...|+|+++++|..
T Consensus 84 ~~~~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~---~~~~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 84 GDKPPDFLGKVAIPLLSIRDGQ--PNCYVLKNKD---LEQAFKGVIYLEMDLIY 132 (133)
T ss_dssp TTEEEEECCBCEEEGGGCCSSC--CEECCCBCSC---TTSCCSSEEEEEEEEEE
T ss_pred CCCCCCeeEEEEEEHHHccCCC--ceEEEeecCC---CCCccceEEEEEEEEEe
Confidence 9888999999999999997654 5899986432 23467899999999863
No 9
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.82 E-value=1.9e-19 Score=160.19 Aligned_cols=121 Identities=30% Similarity=0.559 Sum_probs=106.1
Q ss_pred ccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCCCCeEEeeecCCCCCCeeccEEEEEEecCCCcEEEEEEEECCCC-
Q 008334 256 PVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDESTQHLVVRIYDDEGI- 334 (569)
Q Consensus 256 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~~~~L~i~v~d~~~~- 334 (569)
..|.|+|+|++|++|+..|..|.+||||+++++ .+.++|++++++.||+|||+|.|.+... .+.|.|+|||++..
T Consensus 15 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~---~~~~kT~~~~~t~nP~Wne~f~f~v~~~-~~~l~~~v~d~d~~~ 90 (148)
T 3kwu_A 15 WSAKISITVVCAQGLQAKDKTGSSDPYVTVQVG---KTKKRTKTIYGNLNPVWEENFHFECHNS-SDRIKVRVLDEDDDI 90 (148)
T ss_dssp CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEET---TEEEECCCCCSCSSCEEEEEEEEEECST-TCEEEEEEEECCCSH
T ss_pred cccEEEEEEEeeeCCCCCCCCCCcCeEEEEEEC---CEEEECCccCCCCCCCcccEEEEEecCC-CCEEEEEEEECCCCc
Confidence 469999999999999999999999999999996 6789999999999999999999999765 46899999999985
Q ss_pred ----------CCCcceEEEEEEccccCCCceeEEEEEccccccccCCCcceeEEEEEEEEE
Q 008334 335 ----------QSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQRDTKYRGQVHLELLYC 385 (569)
Q Consensus 335 ----------~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~G~l~l~l~~~ 385 (569)
++|++||++.+++.++ ....+.|++|.+.. ......|+|+++++|.
T Consensus 91 ~~~~~~~~~~~~~~~lG~~~i~l~~l--~~~~~~w~~L~~~~---~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 91 KSRVKQRFKRESDDFLGQTIIEVRTL--SGEMDVWYNLDKRT---DKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHHHHTTTSSCSSEEEEEEEEEGGGC--CSEEEEEEECBCSS---TTCCCCCEEEEEEEEE
T ss_pred cccccccccCCCCccEEEEEEEHHHC--cCCCCEEEEcccCC---CCCCCceEEEEEEEEE
Confidence 7899999999999998 34568999997532 2345789999999985
No 10
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.82 E-value=2.2e-20 Score=166.17 Aligned_cols=117 Identities=22% Similarity=0.335 Sum_probs=101.2
Q ss_pred CccEEEEEEEEEeeccccCCC----------CCCCCcEEEEEEecCCCCeEEeeecCCCCCCeeccEEEEEEecCCCcEE
Q 008334 255 KPVGTLEVKLVQAKGLTNKDL----------IGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDESTQHL 324 (569)
Q Consensus 255 ~~~g~L~V~v~~a~~L~~~d~----------~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~~~~L 324 (569)
...|.|+|+|++|++|+++|. .|.+||||+++++ +.+..+|+++++|+||+|||+|.|.+.+ .+.|
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~--~~~~~kT~v~~ktlnP~WNE~F~f~v~~--~~~L 101 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVD--QVRVGQTSTKQKTNKPTYNEEFCANVTD--GGHL 101 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEET--TEEEEECCCCSSCSSCEEEEEEEEEEEE--ECEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEEC--CEeeEEeeecCCCCCCccCcEEEEEcCC--CCEE
Confidence 467999999999999998873 2579999999997 2345799999999999999999999975 4589
Q ss_pred EEEEEECCCCCCCcceEEEEEEccccCCC----ceeEEEEEccccccccCCCcceeEEEEEEEEE
Q 008334 325 VVRIYDDEGIQSSELIGCAQVRLCELEPG----KVKDVWLKLVKDLDVQRDTKYRGQVHLELLYC 385 (569)
Q Consensus 325 ~i~v~d~~~~~~d~~iG~~~i~l~~l~~~----~~~~~~~~L~~~~~~~~~~~~~G~l~l~l~~~ 385 (569)
.|+|||++.+++|++||++.+++.++..+ ...+.|++|. ..|.|++.++|.
T Consensus 102 ~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~----------~~G~i~l~l~~~ 156 (157)
T 2fk9_A 102 ELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLE----------PEGKVFVVITLT 156 (157)
T ss_dssp EEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECB----------SSCEEEEEEEEC
T ss_pred EEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECC----------CCcEEEEEEEEE
Confidence 99999999999999999999999998744 6789999984 279999999873
No 11
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.82 E-value=8.5e-20 Score=162.41 Aligned_cols=116 Identities=19% Similarity=0.341 Sum_probs=101.6
Q ss_pred ccceEEEEEEEEeEcCCCCCC----------CCCCCcEEEEEEeCCCeeEeecccCCCCCCeeceEEEEEeccCCCCEEE
Q 008334 441 IIRGVLSVTVILAENLPASDL----------MGKADPYVVLTMKKSETRNKTRVVNDCLNPIWNQTFDFVVEDGLHDMLI 510 (569)
Q Consensus 441 ~~~~~L~v~v~~a~~L~~~~~----------~g~~dpyv~v~l~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~~~~~l~ 510 (569)
...|.|+|+|.+|++|+.+|. .|.+||||++++++ ....+|+++++|+||+|||+|+|.+.+ ...|.
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~-~~~~kT~v~~ktlnP~WNE~F~f~v~~--~~~L~ 102 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQ-VRVGQTSTKQKTNKPTYNEEFCANVTD--GGHLE 102 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETT-EEEEECCCCSSCSSCEEEEEEEEEEEE--ECEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECC-EeeEEeeecCCCCCCccCcEEEEEcCC--CCEEE
Confidence 467999999999999998873 36799999999975 345799999999999999999999975 46899
Q ss_pred EEEEECCCCCC-ceeEEEEEecceeeec----ceEeEEEEcCCCCCeEEEEEEEEe
Q 008334 511 AEVWDHDTFGK-DYMGRCILTLTRVILE----GEYTDCFELDGTKSGKLKLHLKWM 561 (569)
Q Consensus 511 i~V~d~~~~~~-d~lG~~~i~l~~l~~~----~~~~~w~~L~~~~~G~i~l~~~~~ 561 (569)
|+|||++..++ |+||++.|+++++..+ ...+.||+|+. .|+|+|+++|.
T Consensus 103 ~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~--~G~i~l~l~~~ 156 (157)
T 2fk9_A 103 LAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP--EGKVFVVITLT 156 (157)
T ss_dssp EEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS--SCEEEEEEEEC
T ss_pred EEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC--CcEEEEEEEEE
Confidence 99999998875 7999999999999865 56799999975 79999999985
No 12
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=2.3e-19 Score=158.15 Aligned_cols=121 Identities=26% Similarity=0.450 Sum_probs=106.5
Q ss_pred cceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCCCeeEeecccCCCCCCeeceEEEEEeccC---CCCEEEEEEEECCC
Q 008334 442 IRGVLSVTVILAENLPASDLMGKADPYVVLTMKKSETRNKTRVVNDCLNPIWNQTFDFVVEDG---LHDMLIAEVWDHDT 518 (569)
Q Consensus 442 ~~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~---~~~~l~i~V~d~~~ 518 (569)
..|.|.|+|++|++|+..+. |.+||||++++++ .+++|++++++.||+|||+|.|.+..+ ....|.|+|||++.
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~--~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~ 81 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKD--EKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFET 81 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSS--CEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTC
T ss_pred CCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECC--EeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCC
Confidence 46899999999999999988 9999999999975 578999999999999999999999754 45789999999998
Q ss_pred CCC-ceeEEEEEecceeeecceEeEEEE---cCCC----CCeEEEEEEEEeecCC
Q 008334 519 FGK-DYMGRCILTLTRVILEGEYTDCFE---LDGT----KSGKLKLHLKWMPQPI 565 (569)
Q Consensus 519 ~~~-d~lG~~~i~l~~l~~~~~~~~w~~---L~~~----~~G~i~l~~~~~p~~~ 565 (569)
.++ ++||++.|++.++..+.....|++ |.+. ..|+|+++++|.|.+.
T Consensus 82 ~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~~~ 136 (140)
T 2dmh_A 82 IGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDPPSG 136 (140)
T ss_dssp SSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECCCBS
T ss_pred CCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEECCCC
Confidence 865 699999999999988777788987 6443 3599999999999764
No 13
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.82 E-value=2.3e-19 Score=164.52 Aligned_cols=129 Identities=25% Similarity=0.482 Sum_probs=102.0
Q ss_pred CccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCCC---CeEEeeecCCCCCCeeccEEEEEEecCCCcEEEEEEEEC
Q 008334 255 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPE---KTKKSKTINNDLNPIWNEHFEFIVEDESTQHLVVRIYDD 331 (569)
Q Consensus 255 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~---~~~kT~~~~~t~nP~wne~f~f~v~~~~~~~L~i~v~d~ 331 (569)
...|.|+|+|++|++|+.++..|.+||||++++..... ++++|+++++++||+|||+|.|.+... ...|.|+|||+
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~-~~~L~~~V~d~ 83 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQ-RHRILFEVFDE 83 (176)
T ss_dssp TTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTT-TCEEEEEEEEC
T ss_pred CCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCC-CCEEEEEEEEC
Confidence 46799999999999999999899999999999984332 568999999999999999999999753 46899999999
Q ss_pred CCCCCCcceEEEEEEccccCCCcee-E-----EEEEccccccccCCCcceeEEEEEEEEEec
Q 008334 332 EGIQSSELIGCAQVRLCELEPGKVK-D-----VWLKLVKDLDVQRDTKYRGQVHLELLYCPF 387 (569)
Q Consensus 332 ~~~~~d~~iG~~~i~l~~l~~~~~~-~-----~~~~L~~~~~~~~~~~~~G~l~l~l~~~p~ 387 (569)
+.+++|++||++.++|.++..+... + .|++|.... ..++..|+|++++.|.|.
T Consensus 84 d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~---~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 84 NRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRS---HKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp C----CEEEEEEEEESCSCCBC------CCCCEEEECBCSS---TTCCCCSEEEEEEEECC-
T ss_pred CCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccC---CCCccCEEEEEEEEEEeC
Confidence 9999999999999999999766443 2 799997532 245578999999999985
No 14
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.81 E-value=1.3e-19 Score=158.89 Aligned_cols=117 Identities=20% Similarity=0.339 Sum_probs=100.9
Q ss_pred ccEEEEEEEEEeeccccCCCCCC-----------CCcEEEEEEecCCCCeEEeeecCCCCCCeeccEEEEEEecCCCcEE
Q 008334 256 PVGTLEVKLVQAKGLTNKDLIGK-----------SDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDESTQHL 324 (569)
Q Consensus 256 ~~g~L~V~v~~a~~L~~~d~~g~-----------~dpyv~v~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~~~~L 324 (569)
..|.|+|+|++|++|++.|..++ +||||+++++ +....+|+++.++.||+|||+|.|.+.+. +.|
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~--~~~~~~T~~~~~t~nP~WnE~f~f~v~~~--~~L 79 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVD--DSRIGQTATKQKTNSPAWHDEFVTDVCNG--RKI 79 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEET--TEEEEECCCCSSCSSCEEEEEEEEEEEEE--CEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEEC--CeEeeeeeEECCCcCCccCCEEEEEecCC--CEE
Confidence 36999999999999998875544 9999999996 23457899999999999999999999764 689
Q ss_pred EEEEEECCCCCCCcceEEEEEEccccCCC--ceeEEEEEccccccccCCCcceeEEEEEEEEEe
Q 008334 325 VVRIYDDEGIQSSELIGCAQVRLCELEPG--KVKDVWLKLVKDLDVQRDTKYRGQVHLELLYCP 386 (569)
Q Consensus 325 ~i~v~d~~~~~~d~~iG~~~i~l~~l~~~--~~~~~~~~L~~~~~~~~~~~~~G~l~l~l~~~p 386 (569)
.|+|||++..++|++||++.+++.++..+ ...+.|++|. +.|+|++.++|.+
T Consensus 80 ~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~----------~~G~i~l~l~~~~ 133 (136)
T 1gmi_A 80 ELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLE----------PEGKVYVIIDLSG 133 (136)
T ss_dssp EEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECB----------SSCEEEEEEEEEE
T ss_pred EEEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcC----------CCeEEEEEEEEEe
Confidence 99999999999999999999999999764 3458999873 3799999999975
No 15
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.80 E-value=4.5e-19 Score=155.42 Aligned_cols=120 Identities=28% Similarity=0.480 Sum_probs=105.7
Q ss_pred cceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCCCeeEeecccC-CCCCCeeceEEEEEeccCCCCEEEEEEEECCCCC
Q 008334 442 IRGVLSVTVILAENLPASDLMGKADPYVVLTMKKSETRNKTRVVN-DCLNPIWNQTFDFVVEDGLHDMLIAEVWDHDTFG 520 (569)
Q Consensus 442 ~~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~~~~~~T~~~~-~t~nP~w~e~f~f~v~~~~~~~l~i~V~d~~~~~ 520 (569)
..+.|.|+|++|++|+..+..|.+||||++++++ .+++|++++ ++.||+|||+|.|.+.+ ....|.|+|||++..+
T Consensus 8 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~--~~~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~V~d~~~~~ 84 (136)
T 1wfj_A 8 PHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRT--QDQKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAKIFDKDVGT 84 (136)
T ss_dssp CEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSS--CEEECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEEECCSSSCT
T ss_pred CcEEEEEEEEeccCCCCcccCCCcCceEEEEECC--ccceeEeccCCCCCCccCcEEEEEECC-CCCEEEEEEEECCCCC
Confidence 5699999999999999999889999999999976 467999998 89999999999999986 5678999999999886
Q ss_pred C-ceeEEEEEecceeeecc-eEeEEEEcC--CCCCeEEEEEEEEeecC
Q 008334 521 K-DYMGRCILTLTRVILEG-EYTDCFELD--GTKSGKLKLHLKWMPQP 564 (569)
Q Consensus 521 ~-d~lG~~~i~l~~l~~~~-~~~~w~~L~--~~~~G~i~l~~~~~p~~ 564 (569)
+ ++||++.|+|.++...+ ....||+|. +...|+|+++++|.|..
T Consensus 85 ~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~~G~i~l~l~~~p~~ 132 (136)
T 1wfj_A 85 EDDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWVALSFKPSG 132 (136)
T ss_dssp TTCCSEEEEEESHHHHHHSEEEEEEEEEEETTEEEEEEEEEEEEEECC
T ss_pred CCceEEEEEEEHHHhccCCCCCcEEEEeecCCccCEEEEEEEEEEeCC
Confidence 5 79999999999985443 458899985 34589999999999964
No 16
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.80 E-value=1e-18 Score=156.36 Aligned_cols=121 Identities=28% Similarity=0.494 Sum_probs=98.7
Q ss_pred ccceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCC----CeeEeecccCCCCCCeeceEEEEEeccCCCCEEEEEEEEC
Q 008334 441 IIRGVLSVTVILAENLPASDLMGKADPYVVLTMKKS----ETRNKTRVVNDCLNPIWNQTFDFVVEDGLHDMLIAEVWDH 516 (569)
Q Consensus 441 ~~~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~----~~~~~T~~~~~t~nP~w~e~f~f~v~~~~~~~l~i~V~d~ 516 (569)
...+.|+|+|++|++|+..+..|.+||||+++++.. ..+++|++++++.||+|||+|.|.+.. ....|.|+|||+
T Consensus 17 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~-~~~~l~~~V~d~ 95 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHP-QQHRLLFEVFDE 95 (153)
T ss_dssp TTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECT-TTCEEEEEEEEC
T ss_pred CCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecC-CCCEEEEEEEEC
Confidence 457999999999999999998899999999999742 257899999999999999999999985 457899999999
Q ss_pred CCCCC-ceeEEEEEecceeeecceE------eEEEEcCC-----CCCeEEEEEEEEee
Q 008334 517 DTFGK-DYMGRCILTLTRVILEGEY------TDCFELDG-----TKSGKLKLHLKWMP 562 (569)
Q Consensus 517 ~~~~~-d~lG~~~i~l~~l~~~~~~------~~w~~L~~-----~~~G~i~l~~~~~p 562 (569)
+..++ ++||++.|++.++...... .+||+|.. ...|+|+++++|.|
T Consensus 96 d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 96 NRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp CSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred CCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEeC
Confidence 98865 6999999999998776532 59999964 34799999999987
No 17
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.79 E-value=2.7e-18 Score=152.80 Aligned_cols=115 Identities=31% Similarity=0.607 Sum_probs=101.8
Q ss_pred cceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCCCeeEeecccCCCCCCeeceEEEEEeccCCCCEEEEEEEECCCC--
Q 008334 442 IRGVLSVTVILAENLPASDLMGKADPYVVLTMKKSETRNKTRVVNDCLNPIWNQTFDFVVEDGLHDMLIAEVWDHDTF-- 519 (569)
Q Consensus 442 ~~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~~~~~l~i~V~d~~~~-- 519 (569)
..|.|+|+|++|++|+..+..|.+||||++++++ .+++|+++++|.||.|||+|.|.+..+ .+.|.|+|||++..
T Consensus 15 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~--~~~kT~~~~~t~nP~Wne~f~f~v~~~-~~~l~~~v~d~d~~~~ 91 (148)
T 3kwu_A 15 WSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGK--TKKRTKTIYGNLNPVWEENFHFECHNS-SDRIKVRVLDEDDDIK 91 (148)
T ss_dssp CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETT--EEEECCCCCSCSSCEEEEEEEEEECST-TCEEEEEEEECCCSHH
T ss_pred cccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECC--EEEECCccCCCCCCCcccEEEEEecCC-CCEEEEEEEECCCCcc
Confidence 4699999999999999999999999999999965 788999999999999999999999865 47899999999985
Q ss_pred ---------C-CceeEEEEEecceeeecceEeEEEEcCCC-----CCeEEEEEEEEe
Q 008334 520 ---------G-KDYMGRCILTLTRVILEGEYTDCFELDGT-----KSGKLKLHLKWM 561 (569)
Q Consensus 520 ---------~-~d~lG~~~i~l~~l~~~~~~~~w~~L~~~-----~~G~i~l~~~~~ 561 (569)
+ +++||++.+++.++ .....+||+|... ..|+|+|+++|.
T Consensus 92 ~~~~~~~~~~~~~~lG~~~i~l~~l--~~~~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 92 SRVKQRFKRESDDFLGQTIIEVRTL--SGEMDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHHHTTTSSCSSEEEEEEEEEGGGC--CSEEEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred ccccccccCCCCccEEEEEEEHHHC--cCCCCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 4 47999999999998 4556899999742 469999999985
No 18
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.79 E-value=7.5e-19 Score=153.93 Aligned_cols=117 Identities=20% Similarity=0.438 Sum_probs=100.9
Q ss_pred cceEEEEEEEEeEcCCCCCCCCC-----------CCcEEEEEEeCCCeeEeecccCCCCCCeeceEEEEEeccCCCCEEE
Q 008334 442 IRGVLSVTVILAENLPASDLMGK-----------ADPYVVLTMKKSETRNKTRVVNDCLNPIWNQTFDFVVEDGLHDMLI 510 (569)
Q Consensus 442 ~~~~L~v~v~~a~~L~~~~~~g~-----------~dpyv~v~l~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~~~~~l~ 510 (569)
..|.|+|+|++|++|+..+..+. +||||++++++ ....+|+++++|+||+|||+|+|.+.+. ..|.
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~-~~~~~T~~~~~t~nP~WnE~f~f~v~~~--~~L~ 80 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDD-SRIGQTATKQKTNSPAWHDEFVTDVCNG--RKIE 80 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETT-EEEEECCCCSSCSSCEEEEEEEEEEEEE--CEEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECC-eEeeeeeEECCCcCCccCCEEEEEecCC--CEEE
Confidence 46999999999999998775443 99999999964 3557899999999999999999999864 7899
Q ss_pred EEEEECCCCCC-ceeEEEEEecceeeecc--eEeEEEEcCCCCCeEEEEEEEEeec
Q 008334 511 AEVWDHDTFGK-DYMGRCILTLTRVILEG--EYTDCFELDGTKSGKLKLHLKWMPQ 563 (569)
Q Consensus 511 i~V~d~~~~~~-d~lG~~~i~l~~l~~~~--~~~~w~~L~~~~~G~i~l~~~~~p~ 563 (569)
|+|||++..++ ++||++.+++.++..++ ..+.|++|+. .|+|+++++|.+.
T Consensus 81 ~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~--~G~i~l~l~~~~~ 134 (136)
T 1gmi_A 81 LAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP--EGKVYVIIDLSGS 134 (136)
T ss_dssp EEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS--SCEEEEEEEEEEE
T ss_pred EEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcCC--CeEEEEEEEEEec
Confidence 99999998875 69999999999988753 4589999975 7999999999864
No 19
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.78 E-value=1.1e-18 Score=151.99 Aligned_cols=124 Identities=22% Similarity=0.430 Sum_probs=102.0
Q ss_pred cEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCCCCeEEeeecCCCCCCeeccEEEEEEecCCCcEEEEEEEECCCCCC
Q 008334 257 VGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDESTQHLVVRIYDDEGIQS 336 (569)
Q Consensus 257 ~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~~~~L~i~v~d~~~~~~ 336 (569)
...|+|+|++|++|.+.|..|.+||||++++.+. .+.++|+++++++||+|||+|.|.+.... .|.|+|||++..++
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~-~~~~kT~v~~~t~nP~wne~f~f~v~~~~--~l~~~v~d~d~~~~ 80 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGS-GQCHSTDTVKNTLDPKWNQHYDLYVGKTD--SITISVWNHKKIHK 80 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTT-CCEEECCCCSSCSSCEEEEEEEEEEETTC--CEEEEEEEGGGTTS
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCC-CceEECCccCCCCCCCccCEEEEEeCCCC--EEEEEEEECCCCCC
Confidence 4689999999999999999999999999999732 47899999999999999999999997643 59999999998866
Q ss_pred ---CcceEEEEEEcccc-CCCceeEEEEEccccccccCCCcceeEEEEEEEE
Q 008334 337 ---SELIGCAQVRLCEL-EPGKVKDVWLKLVKDLDVQRDTKYRGQVHLELLY 384 (569)
Q Consensus 337 ---d~~iG~~~i~l~~l-~~~~~~~~~~~L~~~~~~~~~~~~~G~l~l~l~~ 384 (569)
|++||++.+++.++ ........|++|..... ....+..|+|++++++
T Consensus 81 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~-~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 81 KQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNP-SDTDAVRGQIVVSLQT 131 (132)
T ss_dssp STTTTEEEEEEECHHHHHHHTTSCCEEEECBCSST-TCCCCCCSEEEEEEEE
T ss_pred CCCCCceEEEEEeHHHhhcccccCcEEEeeeecCC-CCCCceeEEEEEEEEc
Confidence 89999999999988 22333457888865321 2234568999999875
No 20
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.78 E-value=7.7e-19 Score=155.32 Aligned_cols=111 Identities=31% Similarity=0.488 Sum_probs=100.2
Q ss_pred cCccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCCCCeEEeeecCCCCCCeeccEEEEEEecC--CCcEEEEEEEEC
Q 008334 254 LKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRIYDD 331 (569)
Q Consensus 254 ~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~--~~~~L~i~v~d~ 331 (569)
....|.|.|+|++|++|+..+..+.+||||++++.+.+.++++|++++++.||+|||+|.|.+... ....|.|+|||+
T Consensus 30 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 109 (143)
T 3f04_A 30 DFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDF 109 (143)
T ss_dssp ETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEEC
T ss_pred eCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeC
Confidence 357799999999999999999889999999999976667789999999999999999999998633 457899999999
Q ss_pred CCCCCCcceEEEEEEccccCCCceeEEEEEccc
Q 008334 332 EGIQSSELIGCAQVRLCELEPGKVKDVWLKLVK 364 (569)
Q Consensus 332 ~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 364 (569)
+..++|++||++.++|.++..+...+.|++|.+
T Consensus 110 d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 110 DRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp CSSSCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred CCCCCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 999999999999999999998888999999853
No 21
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.78 E-value=9.3e-19 Score=152.74 Aligned_cols=117 Identities=32% Similarity=0.562 Sum_probs=103.3
Q ss_pred ccceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCCCeeEeecccCCCCCCeeceEEEEEeccCCCCEEEEEEEECCCCC
Q 008334 441 IIRGVLSVTVILAENLPASDLMGKADPYVVLTMKKSETRNKTRVVNDCLNPIWNQTFDFVVEDGLHDMLIAEVWDHDTFG 520 (569)
Q Consensus 441 ~~~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~~~~~l~i~V~d~~~~~ 520 (569)
...+.|.|+|++|++|+..+..|.+||||++++++ .+++|++++++.||.|||+|.|.+.+. ...|.|+|||++..+
T Consensus 10 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~--~~~kT~~~~~t~nP~wne~f~f~~~~~-~~~l~i~V~d~d~~~ 86 (133)
T 2ep6_A 10 KDVGILQVKVLKAADLLAADFSGKSDPFCLLELGN--DRLQTHTVYKNLNPEWNKVFTFPIKDI-HDVLEVTVFDEDGDK 86 (133)
T ss_dssp CCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETT--EEEECCCCSSCSSCCCCEEEEEEESCT-TCEEEEEEEEEETTE
T ss_pred CCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECC--EEEEeeeecCCCCCccccEEEEEecCC-CCEEEEEEEECCCCC
Confidence 46799999999999999999899999999999976 678999999999999999999999864 578999999999886
Q ss_pred C-ceeEEEEEecceeeecceEeEEEEcCC-----CCCeEEEEEEEEee
Q 008334 521 K-DYMGRCILTLTRVILEGEYTDCFELDG-----TKSGKLKLHLKWMP 562 (569)
Q Consensus 521 ~-d~lG~~~i~l~~l~~~~~~~~w~~L~~-----~~~G~i~l~~~~~p 562 (569)
+ ++||++.+++.++..+. .+||+|.. ...|+|+|+++|..
T Consensus 87 ~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~~~~~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 87 PPDFLGKVAIPLLSIRDGQ--PNCYVLKNKDLEQAFKGVIYLEMDLIY 132 (133)
T ss_dssp EEEECCBCEEEGGGCCSSC--CEECCCBCSCTTSCCSSEEEEEEEEEE
T ss_pred CCCeeEEEEEEHHHccCCC--ceEEEeecCCCCCccceEEEEEEEEEe
Confidence 5 79999999999986543 68999964 35799999999864
No 22
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.78 E-value=1.1e-18 Score=155.88 Aligned_cols=111 Identities=31% Similarity=0.488 Sum_probs=100.0
Q ss_pred cCccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCCCCeEEeeecCCCCCCeeccEEEEEEecC--CCcEEEEEEEEC
Q 008334 254 LKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRIYDD 331 (569)
Q Consensus 254 ~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~--~~~~L~i~v~d~ 331 (569)
....+.|.|+|++|++|+..+..+.+||||++++.+.+.+.++|++++++.||+|||+|.|.+... ....|.|+|||+
T Consensus 38 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 117 (152)
T 1rsy_A 38 DFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDF 117 (152)
T ss_dssp ETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEEC
T ss_pred eCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEEC
Confidence 356799999999999999999889999999999986666789999999999999999999988643 457899999999
Q ss_pred CCCCCCcceEEEEEEccccCCCceeEEEEEccc
Q 008334 332 EGIQSSELIGCAQVRLCELEPGKVKDVWLKLVK 364 (569)
Q Consensus 332 ~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 364 (569)
+.+++|++||++.+++.++..+...+.|++|.+
T Consensus 118 d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 118 DRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp CSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred CCCCCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 999899999999999999988888899999853
No 23
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=1e-18 Score=154.16 Aligned_cols=110 Identities=26% Similarity=0.459 Sum_probs=98.6
Q ss_pred CccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCCCCeEEeeecCCCCCCeeccEEEEEEec---CCCcEEEEEEEEC
Q 008334 255 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVED---ESTQHLVVRIYDD 331 (569)
Q Consensus 255 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~---~~~~~L~i~v~d~ 331 (569)
...+.|+|+|++|++|+..+..|.+||||++++.+.+.+.++|++++++.||+|||+|.|.+.. .....|.|+|||+
T Consensus 23 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~ 102 (141)
T 2d8k_A 23 FQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDY 102 (141)
T ss_dssp SSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEEC
T ss_pred CCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEEC
Confidence 5679999999999999999988999999999998655678999999999999999999998532 2356899999999
Q ss_pred CCCCCCcceEEEEEEccccCCCceeEEEEEccc
Q 008334 332 EGIQSSELIGCAQVRLCELEPGKVKDVWLKLVK 364 (569)
Q Consensus 332 ~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 364 (569)
+.+++|++||++.+++.++..+...+.|++|.+
T Consensus 103 d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 135 (141)
T 2d8k_A 103 DRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKP 135 (141)
T ss_dssp CSSSSCEEEEEEEEETTTSCTTSCEEEEECCEE
T ss_pred CCCCCCcEEEEEEEEhhhhcCCCCccEEEECcC
Confidence 999899999999999999988888899999964
No 24
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.78 E-value=1.9e-18 Score=150.86 Aligned_cols=109 Identities=20% Similarity=0.352 Sum_probs=95.9
Q ss_pred CccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecC--CCCeEEeeecCCCCCCeeccEEEEE-EecC--CCcEEEEEEE
Q 008334 255 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPL--PEKTKKSKTINNDLNPIWNEHFEFI-VEDE--STQHLVVRIY 329 (569)
Q Consensus 255 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~--~~~~~kT~~~~~t~nP~wne~f~f~-v~~~--~~~~L~i~v~ 329 (569)
...|.|.|+|++|++|+. +..|.+||||++++.+. ...+++|+++++++||+|||+|.|. +... ....|.|+||
T Consensus 17 ~~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~ 95 (134)
T 2b3r_A 17 YRNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVL 95 (134)
T ss_dssp EETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEE
T ss_pred ecCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEE
Confidence 356899999999999997 77889999999999653 3467899999999999999999999 7532 4568999999
Q ss_pred ECCCCCCCcceEEEEEEccccCCCceeEEEEEccc
Q 008334 330 DDEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVK 364 (569)
Q Consensus 330 d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 364 (569)
|++..++|++||++.+++.++..+...+.|++|.+
T Consensus 96 d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 130 (134)
T 2b3r_A 96 SAESLRENFFLGGITLPLKDFNLSKETVKWYQLTA 130 (134)
T ss_dssp ECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC
T ss_pred ECCCCCCCcEEEEEEEEhhhccCCCCcceeEECCC
Confidence 99999999999999999999988888899999963
No 25
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.77 E-value=5.5e-18 Score=155.34 Aligned_cols=122 Identities=28% Similarity=0.485 Sum_probs=97.9
Q ss_pred ccceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCCC----eeEeecccCCCCCCeeceEEEEEeccCCCCEEEEEEEEC
Q 008334 441 IIRGVLSVTVILAENLPASDLMGKADPYVVLTMKKSE----TRNKTRVVNDCLNPIWNQTFDFVVEDGLHDMLIAEVWDH 516 (569)
Q Consensus 441 ~~~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~~----~~~~T~~~~~t~nP~w~e~f~f~v~~~~~~~l~i~V~d~ 516 (569)
...|.|+|+|++|++|+..+..|.+||||++++++.. .+++|++++++.||.|||.|.|.+.. ....|.|+|||+
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~-~~~~L~~~V~d~ 83 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLP-QRHRILFEVFDE 83 (176)
T ss_dssp TTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECT-TTCEEEEEEEEC
T ss_pred CCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcC-CCCEEEEEEEEC
Confidence 3569999999999999999989999999999997532 57899999999999999999999984 457899999999
Q ss_pred CCCCC-ceeEEEEEecceeeecceE-e-----EEEEcCCC-----CCeEEEEEEEEeec
Q 008334 517 DTFGK-DYMGRCILTLTRVILEGEY-T-----DCFELDGT-----KSGKLKLHLKWMPQ 563 (569)
Q Consensus 517 ~~~~~-d~lG~~~i~l~~l~~~~~~-~-----~w~~L~~~-----~~G~i~l~~~~~p~ 563 (569)
+..++ ++||++.|+|.++...... . +||+|... ..|+|+|++.|.|.
T Consensus 84 d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 84 NRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp C----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred CCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 98865 7999999999999876443 2 89999743 37999999999986
No 26
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.77 E-value=4.2e-18 Score=155.00 Aligned_cols=125 Identities=25% Similarity=0.332 Sum_probs=103.8
Q ss_pred CccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCCCCeEEeeecCCCCCCeeccEEEEEEecCCCcEEEEEEEECCCC
Q 008334 255 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDESTQHLVVRIYDDEGI 334 (569)
Q Consensus 255 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~~~~L~i~v~d~~~~ 334 (569)
...+.|.|+|++|++|++.+..+.+||||+++++ .++++|+++++++||+|||+|.|.+.. .+.|.|+|||++.+
T Consensus 33 ~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~---~~~~kT~v~~~tlnP~Wne~f~f~v~~--~~~L~~~V~D~d~~ 107 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENKKNWFGPSPYVEVTVD---GQSKKTEKCNNTNSPKWKQPLTVIVTP--VSKLHFRVWSHQTL 107 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC--CCCCCEEEEEEET---TEEEECCCCSSCSSCEEEEEEEEEECT--TCEEEEEEEECCSS
T ss_pred CCceEEEEEEEEeECCCCcccCCCCCeEEEEEEC---CEEeEccccCCCCCCeECCEEEEEeCC--CCEEEEEEEECCCC
Confidence 4578999999999999944444559999999997 488999999999999999999999853 67899999999999
Q ss_pred CCCcceEEEEEEccccCCC---ce--eEEEEEccccccccCCCcceeEEEEEEEEEec
Q 008334 335 QSSELIGCAQVRLCELEPG---KV--KDVWLKLVKDLDVQRDTKYRGQVHLELLYCPF 387 (569)
Q Consensus 335 ~~d~~iG~~~i~l~~l~~~---~~--~~~~~~L~~~~~~~~~~~~~G~l~l~l~~~p~ 387 (569)
++|++||++.+++.++..+ .. ...|++|... ....+..|+|.+.+.|.+.
T Consensus 108 ~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~---~~~~~~~G~L~v~l~~l~~ 162 (173)
T 2nq3_A 108 KSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGD---KEPTETIGDLSICLDGLQL 162 (173)
T ss_dssp SCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEES---SCTTSEEEEEEEEEESEEC
T ss_pred CCCceEEEEEEEHHHhcccCCCCcceeEEEEECccC---CCCCcccEEEEEEEeeeec
Confidence 9999999999999988532 22 2679999754 1244678999999999975
No 27
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.77 E-value=3.3e-19 Score=159.32 Aligned_cols=110 Identities=16% Similarity=0.207 Sum_probs=96.1
Q ss_pred cCccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCC---CCeEEeeecCCCCCCeeccEEEEEEecC--CCcEEEEEE
Q 008334 254 LKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLP---EKTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRI 328 (569)
Q Consensus 254 ~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~---~~~~kT~~~~~t~nP~wne~f~f~v~~~--~~~~L~i~v 328 (569)
....|.|+|+|++|+||+++|..|.+||||++++.+.. ..++||+++++|+||+|||+|.|.+... ....|.|+|
T Consensus 39 ~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V 118 (155)
T 2z0u_A 39 DEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDV 118 (155)
T ss_dssp ETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEE
T ss_pred cCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEE
Confidence 35679999999999999999999999999999998522 2379999999999999999999998643 356899999
Q ss_pred EECCCCCCCcceEEEEEEccccCC-CceeEEEEEcc
Q 008334 329 YDDEGIQSSELIGCAQVRLCELEP-GKVKDVWLKLV 363 (569)
Q Consensus 329 ~d~~~~~~d~~iG~~~i~l~~l~~-~~~~~~~~~L~ 363 (569)
||++..+++++||++.+++.++.. +.....|++|.
T Consensus 119 ~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 119 CTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp EEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred EECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 999999999999999999999953 66778999985
No 28
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.77 E-value=5.8e-18 Score=151.25 Aligned_cols=107 Identities=30% Similarity=0.477 Sum_probs=94.2
Q ss_pred ceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeC-CCeeEeecccCCCCCCeeceEEEEEeccC--CCCEEEEEEEECCCC
Q 008334 443 RGVLSVTVILAENLPASDLMGKADPYVVLTMKK-SETRNKTRVVNDCLNPIWNQTFDFVVEDG--LHDMLIAEVWDHDTF 519 (569)
Q Consensus 443 ~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~-~~~~~~T~~~~~t~nP~w~e~f~f~v~~~--~~~~l~i~V~d~~~~ 519 (569)
.+.|.|+|++|++|+..+..+.+||||++++.. ...+++|++++++.||+|||+|.|.+... ....|.|+|||++..
T Consensus 41 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~ 120 (152)
T 1rsy_A 41 NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRF 120 (152)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCSS
T ss_pred CCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCCC
Confidence 488999999999999999899999999999963 23578999999999999999999988632 457899999999988
Q ss_pred CC-ceeEEEEEecceeeecceEeEEEEcCCC
Q 008334 520 GK-DYMGRCILTLTRVILEGEYTDCFELDGT 549 (569)
Q Consensus 520 ~~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~ 549 (569)
++ ++||++.+++.++..+....+||+|.+.
T Consensus 121 ~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 151 (152)
T 1rsy_A 121 SKHDIIGEFKVPMNTVDFGHVTEEWRDLQSA 151 (152)
T ss_dssp SCCEEEEEEEEEGGGCCCSSCEEEEEECBCC
T ss_pred CCCcEEEEEEEEchhccCCCCcceEEECCCC
Confidence 65 7999999999999877778999999764
No 29
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=3.2e-18 Score=150.91 Aligned_cols=108 Identities=31% Similarity=0.471 Sum_probs=93.8
Q ss_pred ceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeC-CCeeEeecccCCCCCCeeceEEEEEecc---CCCCEEEEEEEECCC
Q 008334 443 RGVLSVTVILAENLPASDLMGKADPYVVLTMKK-SETRNKTRVVNDCLNPIWNQTFDFVVED---GLHDMLIAEVWDHDT 518 (569)
Q Consensus 443 ~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~-~~~~~~T~~~~~t~nP~w~e~f~f~v~~---~~~~~l~i~V~d~~~ 518 (569)
.+.|.|+|++|++|+..+..|.+||||++++.. ...+++|++++++.||+|||+|.|.+.. .....|.|+|||++.
T Consensus 25 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~ 104 (141)
T 2d8k_A 25 ESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDR 104 (141)
T ss_dssp SCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECCS
T ss_pred CCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECCC
Confidence 478999999999999999899999999999963 2357899999999999999999998531 235789999999998
Q ss_pred CCC-ceeEEEEEecceeeecceEeEEEEcCCCC
Q 008334 519 FGK-DYMGRCILTLTRVILEGEYTDCFELDGTK 550 (569)
Q Consensus 519 ~~~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~~ 550 (569)
.++ ++||++.+++.++..+.....||+|.+..
T Consensus 105 ~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 137 (141)
T 2d8k_A 105 FSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPSG 137 (141)
T ss_dssp SSSCEEEEEEEEETTTSCTTSCEEEEECCEECC
T ss_pred CCCCcEEEEEEEEhhhhcCCCCccEEEECcCCC
Confidence 865 79999999999998877789999997654
No 30
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.77 E-value=4.4e-18 Score=147.60 Aligned_cols=104 Identities=25% Similarity=0.497 Sum_probs=86.9
Q ss_pred ceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeC---CCeeEeecccCCCCCCeeceEEEEEec---cCCCCEEEEEEEEC
Q 008334 443 RGVLSVTVILAENLPASDLMGKADPYVVLTMKK---SETRNKTRVVNDCLNPIWNQTFDFVVE---DGLHDMLIAEVWDH 516 (569)
Q Consensus 443 ~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~---~~~~~~T~~~~~t~nP~w~e~f~f~v~---~~~~~~l~i~V~d~ 516 (569)
.+.|.|+|++|++|+..+..|.+||||++++.. ...+++|+++++|.||+|||+|.|.+. +.....|.|+|||+
T Consensus 17 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d~ 96 (129)
T 2bwq_A 17 GHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQ 96 (129)
T ss_dssp TTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEEC
Confidence 488999999999999999899999999999942 246889999999999999999999953 22457899999999
Q ss_pred CCCC---CceeEEEEEecceeeecceEeEEEEcC
Q 008334 517 DTFG---KDYMGRCILTLTRVILEGEYTDCFELD 547 (569)
Q Consensus 517 ~~~~---~d~lG~~~i~l~~l~~~~~~~~w~~L~ 547 (569)
+..+ +++||++.++|.++...+ ..+||+|+
T Consensus 97 d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~Lq 129 (129)
T 2bwq_A 97 ARVREEESEFLGEILIELETALLDD-EPHWYKLQ 129 (129)
T ss_dssp -------CEEEEEEEEEGGGCCCSS-CEEEEECC
T ss_pred CcCcCcCCceeEEEEEEccccCCCc-CCccEECc
Confidence 9886 569999999999987755 78999985
No 31
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.77 E-value=3.4e-18 Score=152.10 Aligned_cols=108 Identities=23% Similarity=0.503 Sum_probs=93.5
Q ss_pred ceEEEEEEEEeEcCCCCC-CCCCCCcEEEEEEeCC---CeeEeecccCCCCCCeeceEEEEEeccC--CCCEEEEEEEEC
Q 008334 443 RGVLSVTVILAENLPASD-LMGKADPYVVLTMKKS---ETRNKTRVVNDCLNPIWNQTFDFVVEDG--LHDMLIAEVWDH 516 (569)
Q Consensus 443 ~~~L~v~v~~a~~L~~~~-~~g~~dpyv~v~l~~~---~~~~~T~~~~~t~nP~w~e~f~f~v~~~--~~~~l~i~V~d~ 516 (569)
.+.|.|+|++|++|+..+ ..|.+||||++++... ..+++|+++++|.||+|||+|.|.+... ....|.|+|||+
T Consensus 22 ~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~ 101 (148)
T 3fdw_A 22 TQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHH 101 (148)
T ss_dssp TTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEE
T ss_pred CCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEEC
Confidence 488999999999999887 6789999999999742 2478999999999999999999998753 345799999999
Q ss_pred CCCCC-ceeEEEEEecceeeecceEeEEEEcCCCC
Q 008334 517 DTFGK-DYMGRCILTLTRVILEGEYTDCFELDGTK 550 (569)
Q Consensus 517 ~~~~~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~~ 550 (569)
+..++ ++||++.++|.++..+....+||+|.++.
T Consensus 102 d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 136 (148)
T 3fdw_A 102 GRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKI 136 (148)
T ss_dssp CGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC-
T ss_pred CCCcCCcEEEEEEEEcccccccCCccceEECcCcc
Confidence 98876 79999999999998777778999998753
No 32
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.77 E-value=5.1e-18 Score=147.80 Aligned_cols=117 Identities=23% Similarity=0.384 Sum_probs=99.8
Q ss_pred ceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCCCeeEeecccCCCCCCeeceEEEEEeccCCCCEEEEEEEECCCCC--
Q 008334 443 RGVLSVTVILAENLPASDLMGKADPYVVLTMKKSETRNKTRVVNDCLNPIWNQTFDFVVEDGLHDMLIAEVWDHDTFG-- 520 (569)
Q Consensus 443 ~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~~~~~l~i~V~d~~~~~-- 520 (569)
...|+|+|++|++|+..+..|.+||||++++++...+++|+++++|+||+|||+|.|.+.+. +.|.|+|||++..+
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~l~~~v~d~d~~~~~ 81 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT--DSITISVWNHKKIHKK 81 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETT--CCEEEEEEEGGGTTSS
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCC--CEEEEEEEECCCCCCC
Confidence 47799999999999999999999999999997545789999999999999999999999864 34999999999876
Q ss_pred --CceeEEEEEecceeeec-ceEeEEEEcCCC-------CCeEEEEEEEEe
Q 008334 521 --KDYMGRCILTLTRVILE-GEYTDCFELDGT-------KSGKLKLHLKWM 561 (569)
Q Consensus 521 --~d~lG~~~i~l~~l~~~-~~~~~w~~L~~~-------~~G~i~l~~~~~ 561 (569)
+++||++.+++.++... ....+|++|... ..|+|+++++++
T Consensus 82 ~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~r 132 (132)
T 3pyc_A 82 QGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQTR 132 (132)
T ss_dssp TTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEEC
T ss_pred CCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEcC
Confidence 47999999999988433 344688998643 279999998863
No 33
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.77 E-value=2.2e-18 Score=151.96 Aligned_cols=109 Identities=26% Similarity=0.505 Sum_probs=93.2
Q ss_pred ceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeC---CCeeEeecccCCCCCCeeceEEEEEe-c--cCCCCEEEEEEEEC
Q 008334 443 RGVLSVTVILAENLPASDLMGKADPYVVLTMKK---SETRNKTRVVNDCLNPIWNQTFDFVV-E--DGLHDMLIAEVWDH 516 (569)
Q Consensus 443 ~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~---~~~~~~T~~~~~t~nP~w~e~f~f~v-~--~~~~~~l~i~V~d~ 516 (569)
.+.|.|+|++|++|+..+..|.+||||++++.. ...+++|+++++|.||+|||+|.|.+ . +.....|.|+|||+
T Consensus 20 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~ 99 (141)
T 1v27_A 20 GHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQ 99 (141)
T ss_dssp TTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEB
T ss_pred CCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEEC
Confidence 478999999999999999899999999999842 24678999999999999999999995 3 22357899999999
Q ss_pred CCCC---CceeEEEEEecceeeecceEeEEEEcCCCCCe
Q 008334 517 DTFG---KDYMGRCILTLTRVILEGEYTDCFELDGTKSG 552 (569)
Q Consensus 517 ~~~~---~d~lG~~~i~l~~l~~~~~~~~w~~L~~~~~G 552 (569)
+..+ +++||++.|+|.++.... ..+||+|.+...|
T Consensus 100 d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~~~~g 137 (141)
T 1v27_A 100 ARVREEESEFLGEILIELETALLDD-EPHWYKLQTHDSG 137 (141)
T ss_dssp CSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBCCSSC
T ss_pred CCCcCCCCceEEEEEEEccccCCCC-CCceEECcccccC
Confidence 9886 469999999999987655 7899999876554
No 34
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.76 E-value=2.1e-18 Score=154.05 Aligned_cols=105 Identities=15% Similarity=0.146 Sum_probs=91.4
Q ss_pred ceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCC----CeeEeecccCCCCCCeeceEEEEEeccC--CCCEEEEEEEEC
Q 008334 443 RGVLSVTVILAENLPASDLMGKADPYVVLTMKKS----ETRNKTRVVNDCLNPIWNQTFDFVVEDG--LHDMLIAEVWDH 516 (569)
Q Consensus 443 ~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~----~~~~~T~~~~~t~nP~w~e~f~f~v~~~--~~~~l~i~V~d~ 516 (569)
.+.|+|+|++|++|+.++.+|.+||||++++... ..++||+++++|+||+|||+|.|.+... ....|.|+|||+
T Consensus 42 ~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d~ 121 (155)
T 2z0u_A 42 NKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTT 121 (155)
T ss_dssp TTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEEE
T ss_pred CCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEEC
Confidence 4889999999999999999999999999999641 2378999999999999999999998642 356899999999
Q ss_pred CCCCC-ceeEEEEEecceeee-cceEeEEEEcC
Q 008334 517 DTFGK-DYMGRCILTLTRVIL-EGEYTDCFELD 547 (569)
Q Consensus 517 ~~~~~-d~lG~~~i~l~~l~~-~~~~~~w~~L~ 547 (569)
+..++ ++||++.|+|.++.. .....+||+|.
T Consensus 122 d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 122 DRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp CTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred CCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 99876 799999999999853 45678999985
No 35
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.75 E-value=7.2e-18 Score=147.15 Aligned_cols=111 Identities=18% Similarity=0.270 Sum_probs=93.6
Q ss_pred ccceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeC---CCeeEeecccCCCCCCeeceEEEEE-ecc--CCCCEEEEEEE
Q 008334 441 IIRGVLSVTVILAENLPASDLMGKADPYVVLTMKK---SETRNKTRVVNDCLNPIWNQTFDFV-VED--GLHDMLIAEVW 514 (569)
Q Consensus 441 ~~~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~---~~~~~~T~~~~~t~nP~w~e~f~f~-v~~--~~~~~l~i~V~ 514 (569)
...+.|.|+|++|++|+. +..|.+||||++++.. ...+++|+++++|+||+|||+|.|. +.. .....|.|+||
T Consensus 17 ~~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~ 95 (134)
T 2b3r_A 17 YRNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVL 95 (134)
T ss_dssp EETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEE
T ss_pred ecCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEE
Confidence 456899999999999997 7788999999999943 2357899999999999999999999 763 24578999999
Q ss_pred ECCCCCC-ceeEEEEEecceeeecceEeEEEEcCCCCCe
Q 008334 515 DHDTFGK-DYMGRCILTLTRVILEGEYTDCFELDGTKSG 552 (569)
Q Consensus 515 d~~~~~~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~~~G 552 (569)
|++..++ ++||++.++|.++..+....+||+|.+.+.|
T Consensus 96 d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~~g 134 (134)
T 2b3r_A 96 SAESLRENFFLGGITLPLKDFNLSKETVKWYQLTAATYL 134 (134)
T ss_dssp ECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC----
T ss_pred ECCCCCCCcEEEEEEEEhhhccCCCCcceeEECCCccCC
Confidence 9998875 6999999999999887778999999987654
No 36
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.75 E-value=2.4e-18 Score=151.97 Aligned_cols=107 Identities=27% Similarity=0.507 Sum_probs=93.1
Q ss_pred eEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCCC------------eeEeecccCCCCCCeeceEEEEE-ec--cCCCCE
Q 008334 444 GVLSVTVILAENLPASDLMGKADPYVVLTMKKSE------------TRNKTRVVNDCLNPIWNQTFDFV-VE--DGLHDM 508 (569)
Q Consensus 444 ~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~~------------~~~~T~~~~~t~nP~w~e~f~f~-v~--~~~~~~ 508 (569)
+.|.|+|++|++|+..+..|.+||||++++.+.. .+++|+++++|.||+|||+|.|. +. +.....
T Consensus 18 ~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~~ 97 (142)
T 1rh8_A 18 GNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKT 97 (142)
T ss_dssp TEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTCE
T ss_pred CEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCCE
Confidence 7899999999999999989999999999997532 35799999999999999999997 54 224678
Q ss_pred EEEEEEECCCCCC-ceeEEEEEecceeeecceEeEEEEcCCCC
Q 008334 509 LIAEVWDHDTFGK-DYMGRCILTLTRVILEGEYTDCFELDGTK 550 (569)
Q Consensus 509 l~i~V~d~~~~~~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~~ 550 (569)
|.|+|||++..++ ++||++.|+|.++.......+||+|.+..
T Consensus 98 l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 140 (142)
T 1rh8_A 98 LEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQT 140 (142)
T ss_dssp EEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCCC
T ss_pred EEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCccC
Confidence 9999999999876 79999999999997766778999998764
No 37
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.75 E-value=1e-17 Score=148.13 Aligned_cols=107 Identities=30% Similarity=0.469 Sum_probs=94.0
Q ss_pred cceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeC-CCeeEeecccCCCCCCeeceEEEEEeccC--CCCEEEEEEEECCC
Q 008334 442 IRGVLSVTVILAENLPASDLMGKADPYVVLTMKK-SETRNKTRVVNDCLNPIWNQTFDFVVEDG--LHDMLIAEVWDHDT 518 (569)
Q Consensus 442 ~~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~-~~~~~~T~~~~~t~nP~w~e~f~f~v~~~--~~~~l~i~V~d~~~ 518 (569)
..+.|.|+|++|++|+..+..+.+||||++++.. ...+++|+++++|.||+|||+|.|.+... ....|.|+|||++.
T Consensus 32 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~ 111 (143)
T 3f04_A 32 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR 111 (143)
T ss_dssp TTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS
T ss_pred CCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCC
Confidence 3488999999999999998889999999999953 23578999999999999999999998632 45789999999999
Q ss_pred CCC-ceeEEEEEecceeeecceEeEEEEcCC
Q 008334 519 FGK-DYMGRCILTLTRVILEGEYTDCFELDG 548 (569)
Q Consensus 519 ~~~-d~lG~~~i~l~~l~~~~~~~~w~~L~~ 548 (569)
.++ ++||++.++|.++..+....+||+|+.
T Consensus 112 ~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 112 FSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp SSCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred CCCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 865 799999999999988778899999975
No 38
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.75 E-value=9.2e-18 Score=150.09 Aligned_cols=110 Identities=24% Similarity=0.449 Sum_probs=92.2
Q ss_pred cceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeC---CCeeEeecccCCCCCCeeceEEEEEeccC-CCCEEEEEEEECC
Q 008334 442 IRGVLSVTVILAENLPASDLMGKADPYVVLTMKK---SETRNKTRVVNDCLNPIWNQTFDFVVEDG-LHDMLIAEVWDHD 517 (569)
Q Consensus 442 ~~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~---~~~~~~T~~~~~t~nP~w~e~f~f~v~~~-~~~~l~i~V~d~~ 517 (569)
..+.|.|+|++|++|+..+ .|.+||||++++.. ...+++|+++++|.||+|||+|.|.+... ....|.|+|||++
T Consensus 25 ~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d 103 (153)
T 3fbk_A 25 QDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRA 103 (153)
T ss_dssp SSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEECC
T ss_pred CCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeCC
Confidence 3588999999999999998 68999999999953 23578999999999999999999998421 2356999999999
Q ss_pred CCC--CceeEEEEEecceeee-cceEeEEEEcCCCCCe
Q 008334 518 TFG--KDYMGRCILTLTRVIL-EGEYTDCFELDGTKSG 552 (569)
Q Consensus 518 ~~~--~d~lG~~~i~l~~l~~-~~~~~~w~~L~~~~~G 552 (569)
..+ +++||++.++|.++.. +....+||+|.+...|
T Consensus 104 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~~g 141 (153)
T 3fbk_A 104 SQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEHLG 141 (153)
T ss_dssp SSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTTGG
T ss_pred CCCCCCcEEEEEEEEHHHhcCCCCccccEEECCChhhc
Confidence 875 4699999999999975 5677899999876544
No 39
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.75 E-value=3.4e-18 Score=152.21 Aligned_cols=110 Identities=33% Similarity=0.547 Sum_probs=95.0
Q ss_pred eEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCC---CeeEeecccCCCCCCeeceEEEEEeccC-CCCEEEEEEEECCCC
Q 008334 444 GVLSVTVILAENLPASDLMGKADPYVVLTMKKS---ETRNKTRVVNDCLNPIWNQTFDFVVEDG-LHDMLIAEVWDHDTF 519 (569)
Q Consensus 444 ~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~---~~~~~T~~~~~t~nP~w~e~f~f~v~~~-~~~~l~i~V~d~~~~ 519 (569)
+.|.|+|++|++|+..+..+.+||||++++... ..+++|++++++.||+|||+|.|.+... ....|.|+|||++..
T Consensus 31 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~~ 110 (149)
T 1a25_A 31 EVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLT 110 (149)
T ss_dssp SEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCSS
T ss_pred CEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCCC
Confidence 679999999999999998899999999999742 3578999999999999999999999753 246899999999998
Q ss_pred CC-ceeEEEEEecceeeecceEeEEEEcCCCCCeEE
Q 008334 520 GK-DYMGRCILTLTRVILEGEYTDCFELDGTKSGKL 554 (569)
Q Consensus 520 ~~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~~~G~i 554 (569)
++ ++||++.|++.++... ..++||+|.+...|++
T Consensus 111 ~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~~~~g~~ 145 (149)
T 1a25_A 111 SRNDFMGSLSFGISELQKA-GVDGWFKLLSQEEGEY 145 (149)
T ss_dssp SCCEEEEEEEEEHHHHTTC-CEEEEEECBCHHHHTT
T ss_pred CCCCEEEEEEEEHHHhCcC-ccCCeEEccCCCCCcc
Confidence 65 6999999999998765 4789999987655543
No 40
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.75 E-value=4.9e-18 Score=147.27 Aligned_cols=108 Identities=23% Similarity=0.410 Sum_probs=89.6
Q ss_pred cCccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCC--CCeEEeeecCCCCCCeeccEEEEEEec---CCCcEEEEEE
Q 008334 254 LKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLP--EKTKKSKTINNDLNPIWNEHFEFIVED---ESTQHLVVRI 328 (569)
Q Consensus 254 ~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~--~~~~kT~~~~~t~nP~wne~f~f~v~~---~~~~~L~i~v 328 (569)
....|.|.|+|++|++|+..+..|.+||||++++.+.+ .++++|++++++.||+|||+|.|.+.. .....|.|+|
T Consensus 14 ~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V 93 (129)
T 2bwq_A 14 DKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITL 93 (129)
T ss_dssp ETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEE
T ss_pred ccCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEE
Confidence 35679999999999999999988999999999996533 468999999999999999999998532 2456899999
Q ss_pred EECCCCCC--CcceEEEEEEccccCCCceeEEEEEc
Q 008334 329 YDDEGIQS--SELIGCAQVRLCELEPGKVKDVWLKL 362 (569)
Q Consensus 329 ~d~~~~~~--d~~iG~~~i~l~~l~~~~~~~~~~~L 362 (569)
||++..++ |++||++.+++.++.... .+.|++|
T Consensus 94 ~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L 128 (129)
T 2bwq_A 94 WDQARVREEESEFLGEILIELETALLDD-EPHWYKL 128 (129)
T ss_dssp EEC-------CEEEEEEEEEGGGCCCSS-CEEEEEC
T ss_pred EECCcCcCcCCceeEEEEEEccccCCCc-CCccEEC
Confidence 99999886 999999999999987654 7899987
No 41
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.75 E-value=6.3e-18 Score=148.25 Aligned_cols=109 Identities=31% Similarity=0.541 Sum_probs=94.3
Q ss_pred eEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeC---CCeeEeecccCCCCCCeeceEEEEEeccC-CCCEEEEEEEECCCC
Q 008334 444 GVLSVTVILAENLPASDLMGKADPYVVLTMKK---SETRNKTRVVNDCLNPIWNQTFDFVVEDG-LHDMLIAEVWDHDTF 519 (569)
Q Consensus 444 ~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~---~~~~~~T~~~~~t~nP~w~e~f~f~v~~~-~~~~l~i~V~d~~~~ 519 (569)
+.|.|+|++|++|+..+..|.+||||++++.. ...+++|++++++.||.|||+|.|.+... ....|.|+|||++..
T Consensus 16 ~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d~~ 95 (137)
T 3rdl_A 16 EKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDRT 95 (137)
T ss_dssp TEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECCSS
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECCCC
Confidence 78999999999999999899999999999953 24678999999999999999999998643 235899999999988
Q ss_pred CC-ceeEEEEEecceeeecceEeEEEEcCCCCCeE
Q 008334 520 GK-DYMGRCILTLTRVILEGEYTDCFELDGTKSGK 553 (569)
Q Consensus 520 ~~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~~~G~ 553 (569)
++ ++||++.++|+++...+ ..+||+|.+...|+
T Consensus 96 ~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~~~g~ 129 (137)
T 3rdl_A 96 TRNDFMGSLSFGVSELMKMP-ASGWYKLLNQEEGE 129 (137)
T ss_dssp SCCEEEEEEEEEHHHHHHSC-EEEEEECBCHHHHT
T ss_pred CCCceEEEEEEeHHHhccCc-cCceEECcCccccc
Confidence 65 79999999999997665 79999998765443
No 42
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.74 E-value=1.5e-17 Score=145.98 Aligned_cols=111 Identities=20% Similarity=0.303 Sum_probs=95.4
Q ss_pred cCccEEEEEEEEEeeccccCCCC-CCCCcEEEEEEecCCCCeEEeeecCCCCCCeeccEEEEE-EecC--CCcEEEEEEE
Q 008334 254 LKPVGTLEVKLVQAKGLTNKDLI-GKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFI-VEDE--STQHLVVRIY 329 (569)
Q Consensus 254 ~~~~g~L~V~v~~a~~L~~~d~~-g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~wne~f~f~-v~~~--~~~~L~i~v~ 329 (569)
....|.|.|+|++|++|+.++.. +.+||||++++.+.+.++++|+++++++||+|||+|.|. +... ....|.|+||
T Consensus 18 ~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~ 97 (138)
T 1ugk_A 18 NFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTIL 97 (138)
T ss_dssp EGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEE
T ss_pred ECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEE
Confidence 35679999999999999999985 899999999998655689999999999999999999996 5432 3468999999
Q ss_pred ECCCCCCCcceEEEEEEccccCCCce-eEEEEEccc
Q 008334 330 DDEGIQSSELIGCAQVRLCELEPGKV-KDVWLKLVK 364 (569)
Q Consensus 330 d~~~~~~d~~iG~~~i~l~~l~~~~~-~~~~~~L~~ 364 (569)
|++.+++|++||++.++|.++..+.. ...|++|.+
T Consensus 98 d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~ 133 (138)
T 1ugk_A 98 SFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIIS 133 (138)
T ss_dssp EECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBS
T ss_pred ECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhc
Confidence 99999999999999999999977544 456788864
No 43
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.74 E-value=3.1e-17 Score=143.93 Aligned_cols=105 Identities=19% Similarity=0.204 Sum_probs=89.3
Q ss_pred ceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeC--CCeeEeecccCCCCCCeeceEEEEEeccC--CCCEEEEEEEECCC
Q 008334 443 RGVLSVTVILAENLPASDLMGKADPYVVLTMKK--SETRNKTRVVNDCLNPIWNQTFDFVVEDG--LHDMLIAEVWDHDT 518 (569)
Q Consensus 443 ~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~--~~~~~~T~~~~~t~nP~w~e~f~f~v~~~--~~~~l~i~V~d~~~ 518 (569)
.+.|.|+|++|++ .+..|.+||||++++.. ...+++|+++++|+||+|||+|.|.+... ....|.|+|||++.
T Consensus 25 ~~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d~ 101 (138)
T 1wfm_A 25 KAELFVTRLEAVT---SNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDR 101 (138)
T ss_dssp TTEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECCS
T ss_pred CCEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECCC
Confidence 4889999999993 56788999999999953 23468999999999999999999998643 35689999999998
Q ss_pred CCC-ceeEEEEEecceeeecceEeEEEEcCCCC
Q 008334 519 FGK-DYMGRCILTLTRVILEGEYTDCFELDGTK 550 (569)
Q Consensus 519 ~~~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~~ 550 (569)
.++ ++||++.++|.++.......+|++|....
T Consensus 102 ~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 134 (138)
T 1wfm_A 102 FSRHSVAGELRLGLDGTSVPLGAAQWGELKTSG 134 (138)
T ss_dssp SCTTSCSEEEEEESSSSSSCTTCCEEEECCCCS
T ss_pred CCCCcEEEEEEEEcccccCcccccceeeCcCCC
Confidence 875 79999999999987666678999998653
No 44
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.74 E-value=3.5e-18 Score=152.02 Aligned_cols=112 Identities=17% Similarity=0.336 Sum_probs=97.9
Q ss_pred cCccEEEEEEEEEeeccccCC-CCCCCCcEEEEEEecCCC--CeEEeeecCCCCCCeeccEEEEEEecC--CCcEEEEEE
Q 008334 254 LKPVGTLEVKLVQAKGLTNKD-LIGKSDPYAVLFVRPLPE--KTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRI 328 (569)
Q Consensus 254 ~~~~g~L~V~v~~a~~L~~~d-~~g~~dpyv~v~~~~~~~--~~~kT~~~~~t~nP~wne~f~f~v~~~--~~~~L~i~v 328 (569)
....|.|.|+|++|++|+..+ ..|.+||||++++.+.+. .+++|+++++++||+|||+|.|.+... ....|.|+|
T Consensus 19 ~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V 98 (148)
T 3fdw_A 19 EQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSV 98 (148)
T ss_dssp ETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEE
T ss_pred eCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEE
Confidence 356799999999999999888 578999999999986443 478999999999999999999998654 345799999
Q ss_pred EECCCCCCCcceEEEEEEccccCCCceeEEEEEcccc
Q 008334 329 YDDEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVKD 365 (569)
Q Consensus 329 ~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~~ 365 (569)
||++..++|++||++.++|.++..+...+.|++|.+.
T Consensus 99 ~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 135 (148)
T 3fdw_A 99 WHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGK 135 (148)
T ss_dssp EEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC
T ss_pred EECCCCcCCcEEEEEEEEcccccccCCccceEECcCc
Confidence 9999998999999999999999777677899999754
No 45
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.74 E-value=1.1e-17 Score=147.74 Aligned_cols=106 Identities=30% Similarity=0.432 Sum_probs=91.2
Q ss_pred ceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCC---CeeEeecccCCCCCCeeceEEEEEeccC--CCCEEEEEEEECC
Q 008334 443 RGVLSVTVILAENLPASDLMGKADPYVVLTMKKS---ETRNKTRVVNDCLNPIWNQTFDFVVEDG--LHDMLIAEVWDHD 517 (569)
Q Consensus 443 ~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~---~~~~~T~~~~~t~nP~w~e~f~f~v~~~--~~~~l~i~V~d~~ 517 (569)
.+.|.|+|++|++|+..+..| +||||++++... ..+++|+++++|.||+|||+|.|.+... ....|.|+|||++
T Consensus 23 ~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d 101 (142)
T 2dmg_A 23 RNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSG 101 (142)
T ss_dssp TTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECC
T ss_pred CCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECC
Confidence 478999999999999999888 999999999532 2578999999999999999999998532 3458999999999
Q ss_pred CCC--C-ceeEEEEEecceeeecceEeEEEEcCCC
Q 008334 518 TFG--K-DYMGRCILTLTRVILEGEYTDCFELDGT 549 (569)
Q Consensus 518 ~~~--~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~ 549 (569)
..+ + ++||++.|+|.++.......+||+|.+.
T Consensus 102 ~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~ 136 (142)
T 2dmg_A 102 GFLSKDKGLLGKVLVALASEELAKGWTQWYDLTED 136 (142)
T ss_dssp CSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCS
T ss_pred CccccCCcEEEEEEEecccccccccccceeeccCC
Confidence 874 3 5999999999998776677899999765
No 46
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.74 E-value=1.1e-17 Score=147.75 Aligned_cols=110 Identities=27% Similarity=0.519 Sum_probs=96.9
Q ss_pred CccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCC--CCeEEeeecCCCCCCeeccEEEEE-EecC--CCcEEEEEEE
Q 008334 255 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLP--EKTKKSKTINNDLNPIWNEHFEFI-VEDE--STQHLVVRIY 329 (569)
Q Consensus 255 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~--~~~~kT~~~~~t~nP~wne~f~f~-v~~~--~~~~L~i~v~ 329 (569)
...|.|.|+|++|++|+..+..|.+||||++++.+.. ...++|++++++.||+|||+|.|. +... ....|.|+||
T Consensus 26 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~ 105 (142)
T 2chd_A 26 QDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVC 105 (142)
T ss_dssp GGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEE
T ss_pred CCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEE
Confidence 5779999999999999999988999999999998432 368999999999999999999998 5422 2368999999
Q ss_pred ECCCCCCCcceEEEEEEccccCCCceeEEEEEccc
Q 008334 330 DDEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVK 364 (569)
Q Consensus 330 d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 364 (569)
|++..++|++||++.+++.++..+.....|++|.+
T Consensus 106 d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 106 DEDKFGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp EECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred ECCCCCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 99999899999999999999998888899999854
No 47
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.73 E-value=5.3e-18 Score=149.72 Aligned_cols=110 Identities=25% Similarity=0.384 Sum_probs=94.9
Q ss_pred cCccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCCC--CeEEeeecCCCCCCeeccEEEEEEecC--CCcEEEEEEE
Q 008334 254 LKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPE--KTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRIY 329 (569)
Q Consensus 254 ~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~--~~~kT~~~~~t~nP~wne~f~f~v~~~--~~~~L~i~v~ 329 (569)
....|.|.|+|++|++|+.++..| +||||++++.+.+. .+++|++++++.||+|||+|.|.+... ....|.|+||
T Consensus 20 ~~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~ 98 (142)
T 2dmg_A 20 SSQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVK 98 (142)
T ss_dssp ETTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEE
T ss_pred eCCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEE
Confidence 356799999999999999999888 99999999975443 689999999999999999999998532 3458999999
Q ss_pred ECCCCCC--CcceEEEEEEccccCCCceeEEEEEccc
Q 008334 330 DDEGIQS--SELIGCAQVRLCELEPGKVKDVWLKLVK 364 (569)
Q Consensus 330 d~~~~~~--d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 364 (569)
|++.++. |++||++.+++.++..+...+.|++|.+
T Consensus 99 d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~ 135 (142)
T 2dmg_A 99 NSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTE 135 (142)
T ss_dssp ECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBC
T ss_pred ECCCccccCCcEEEEEEEecccccccccccceeeccC
Confidence 9998753 5799999999999987777889999964
No 48
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.73 E-value=1.9e-17 Score=147.43 Aligned_cols=107 Identities=36% Similarity=0.553 Sum_probs=94.7
Q ss_pred cEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCC--CCeEEeeecCCCCCCeeccEEEEEEecC-CCcEEEEEEEECCC
Q 008334 257 VGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLP--EKTKKSKTINNDLNPIWNEHFEFIVEDE-STQHLVVRIYDDEG 333 (569)
Q Consensus 257 ~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~--~~~~kT~~~~~t~nP~wne~f~f~v~~~-~~~~L~i~v~d~~~ 333 (569)
.|.|.|+|++|++|+..+..+.+||||++++.+.. ..+++|++++++.||+|||+|.|.+... ....|.|+|||++.
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~ 109 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 109 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCC
Confidence 57899999999999999988999999999998532 4678999999999999999999998753 24589999999999
Q ss_pred CCCCcceEEEEEEccccCCCceeEEEEEccc
Q 008334 334 IQSSELIGCAQVRLCELEPGKVKDVWLKLVK 364 (569)
Q Consensus 334 ~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 364 (569)
.++|++||++.+++.++..+ ..+.|++|..
T Consensus 110 ~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~ 139 (149)
T 1a25_A 110 TSRNDFMGSLSFGISELQKA-GVDGWFKLLS 139 (149)
T ss_dssp SSCCEEEEEEEEEHHHHTTC-CEEEEEECBC
T ss_pred CCCCCEEEEEEEEHHHhCcC-ccCCeEEccC
Confidence 98999999999999999776 4789999964
No 49
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.73 E-value=7.4e-17 Score=141.58 Aligned_cols=109 Identities=26% Similarity=0.388 Sum_probs=91.2
Q ss_pred cceEEEEEEEEeEcCCCCCCC-CCCCcEEEEEEeC-CCeeEeecccCCCCCCeeceEEEEE-eccC--CCCEEEEEEEEC
Q 008334 442 IRGVLSVTVILAENLPASDLM-GKADPYVVLTMKK-SETRNKTRVVNDCLNPIWNQTFDFV-VEDG--LHDMLIAEVWDH 516 (569)
Q Consensus 442 ~~~~L~v~v~~a~~L~~~~~~-g~~dpyv~v~l~~-~~~~~~T~~~~~t~nP~w~e~f~f~-v~~~--~~~~l~i~V~d~ 516 (569)
..+.|.|+|++|++|+..+.. |.+||||++++.. ...+++|+++++|.||+|||+|.|. +... ....|.|+|||+
T Consensus 20 ~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~ 99 (138)
T 1ugk_A 20 ERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSF 99 (138)
T ss_dssp GGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEEC
Confidence 348899999999999999885 8999999999974 2368999999999999999999996 6532 346899999999
Q ss_pred CCCCC-ceeEEEEEecceeeecce-EeEEEEcCCCC
Q 008334 517 DTFGK-DYMGRCILTLTRVILEGE-YTDCFELDGTK 550 (569)
Q Consensus 517 ~~~~~-d~lG~~~i~l~~l~~~~~-~~~w~~L~~~~ 550 (569)
+..++ ++||++.++|.++..... ..-|++|+..+
T Consensus 100 d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~~~ 135 (138)
T 1ugk_A 100 DRFSRDDIIGEVLIPLSGIELSEGKMLMNREIISGP 135 (138)
T ss_dssp CSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBSSS
T ss_pred CCCCCCcEEEEEEEehhHccCCCCcchhhhhhhcCC
Confidence 98865 799999999999977643 45678887653
No 50
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.73 E-value=1.2e-17 Score=146.42 Aligned_cols=109 Identities=33% Similarity=0.505 Sum_probs=95.8
Q ss_pred ccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecC--CCCeEEeeecCCCCCCeeccEEEEEEecC-CCcEEEEEEEECC
Q 008334 256 PVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPL--PEKTKKSKTINNDLNPIWNEHFEFIVEDE-STQHLVVRIYDDE 332 (569)
Q Consensus 256 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~--~~~~~kT~~~~~t~nP~wne~f~f~v~~~-~~~~L~i~v~d~~ 332 (569)
..|.|.|+|++|++|+..+..|.+||||++++.+. ....++|++++++.||+|||+|.|.+... ....|.|+|||++
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d 93 (137)
T 3rdl_A 14 TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWD 93 (137)
T ss_dssp ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECC
Confidence 45999999999999999998999999999999643 35689999999999999999999998653 2358999999999
Q ss_pred CCCCCcceEEEEEEccccCCCceeEEEEEcccc
Q 008334 333 GIQSSELIGCAQVRLCELEPGKVKDVWLKLVKD 365 (569)
Q Consensus 333 ~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~~ 365 (569)
..++|++||++.+++.++..+. .+.|++|.+.
T Consensus 94 ~~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~ 125 (137)
T 3rdl_A 94 RTTRNDFMGSLSFGVSELMKMP-ASGWYKLLNQ 125 (137)
T ss_dssp SSSCCEEEEEEEEEHHHHHHSC-EEEEEECBCH
T ss_pred CCCCCceEEEEEEeHHHhccCc-cCceEECcCc
Confidence 9999999999999999997655 7899999754
No 51
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.73 E-value=6.6e-18 Score=150.01 Aligned_cols=111 Identities=21% Similarity=0.379 Sum_probs=95.6
Q ss_pred cCccEEEEEEEEEeeccccC-CC------CCCCCcEEEEEEecCCCCeEEeeecCCCCCCeeccEEEEEEecC--CCcEE
Q 008334 254 LKPVGTLEVKLVQAKGLTNK-DL------IGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDE--STQHL 324 (569)
Q Consensus 254 ~~~~g~L~V~v~~a~~L~~~-d~------~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~--~~~~L 324 (569)
....|.|.|+|++|++|+.. +. .+.+||||++++.+.+.++++|++++++.||+|||+|.|.+... ....|
T Consensus 22 ~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L 101 (147)
T 2enp_A 22 DLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTL 101 (147)
T ss_dssp ETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEE
T ss_pred cCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEE
Confidence 35779999999999999984 33 35899999999986556789999999999999999999998642 24589
Q ss_pred EEEEEECCCCCCCcceEEEEEEccccCCCceeEEEEEccc
Q 008334 325 VVRIYDDEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVK 364 (569)
Q Consensus 325 ~i~v~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 364 (569)
.|+|||++.+++|++||++.++|.++..+.....|+.|.+
T Consensus 102 ~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~ 141 (147)
T 2enp_A 102 LLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIP 141 (147)
T ss_dssp EEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBC
T ss_pred EEEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeec
Confidence 9999999999999999999999999987776788998864
No 52
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.73 E-value=7.6e-18 Score=148.50 Aligned_cols=110 Identities=23% Similarity=0.413 Sum_probs=94.8
Q ss_pred CccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecC--CCCeEEeeecCCCCCCeeccEEEEEEec---CCCcEEEEEEE
Q 008334 255 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPL--PEKTKKSKTINNDLNPIWNEHFEFIVED---ESTQHLVVRIY 329 (569)
Q Consensus 255 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~--~~~~~kT~~~~~t~nP~wne~f~f~v~~---~~~~~L~i~v~ 329 (569)
...+.|.|+|++|++|+.++..|.+||||++++.+. ..++++|++++++.||+|||+|.|.+.. .....|.|+||
T Consensus 18 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~ 97 (141)
T 1v27_A 18 KVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLW 97 (141)
T ss_dssp TTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEE
T ss_pred CCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEE
Confidence 567999999999999999998999999999998542 2567899999999999999999998432 23568999999
Q ss_pred ECCCCCC--CcceEEEEEEccccCCCceeEEEEEcccc
Q 008334 330 DDEGIQS--SELIGCAQVRLCELEPGKVKDVWLKLVKD 365 (569)
Q Consensus 330 d~~~~~~--d~~iG~~~i~l~~l~~~~~~~~~~~L~~~ 365 (569)
|++..++ |++||++.+++.++.... .+.|++|.+.
T Consensus 98 d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~~ 134 (141)
T 1v27_A 98 DQARVREEESEFLGEILIELETALLDD-EPHWYKLQTH 134 (141)
T ss_dssp EBCSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBCC
T ss_pred ECCCCcCCCCceEEEEEEEccccCCCC-CCceEECccc
Confidence 9999886 999999999999987654 7899999753
No 53
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.73 E-value=1.9e-17 Score=145.33 Aligned_cols=107 Identities=16% Similarity=0.149 Sum_probs=92.8
Q ss_pred CccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecC-CCCeEEeeecCCCCCCeeccEEEEEEecC--CCcEEEEEEEEC
Q 008334 255 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPL-PEKTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRIYDD 331 (569)
Q Consensus 255 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~-~~~~~kT~~~~~t~nP~wne~f~f~v~~~--~~~~L~i~v~d~ 331 (569)
...+.|.|+|++|+ ++|..|.+||||++++.+. +...++|+++++++||+|||+|.|.+... ....|.|+|||+
T Consensus 23 ~~~~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~ 99 (138)
T 1wfm_A 23 CQKAELFVTRLEAV---TSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTC 99 (138)
T ss_dssp TTTTEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEEC
T ss_pred CCCCEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEEC
Confidence 56799999999999 3677899999999999753 23468999999999999999999998643 356899999999
Q ss_pred CCCCCCcceEEEEEEccccCCCceeEEEEEccc
Q 008334 332 EGIQSSELIGCAQVRLCELEPGKVKDVWLKLVK 364 (569)
Q Consensus 332 ~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 364 (569)
+.+++|++||++.++|.++..+...+.|++|.+
T Consensus 100 d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~ 132 (138)
T 1wfm_A 100 DRFSRHSVAGELRLGLDGTSVPLGAAQWGELKT 132 (138)
T ss_dssp CSSCTTSCSEEEEEESSSSSSCTTCCEEEECCC
T ss_pred CCCCCCcEEEEEEEEcccccCcccccceeeCcC
Confidence 999999999999999999976677889999964
No 54
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.73 E-value=1e-16 Score=158.84 Aligned_cols=121 Identities=30% Similarity=0.514 Sum_probs=106.0
Q ss_pred ceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCC-CeeEeecccCCCCCCeeceEEEEEeccC--CCCEEEEEEEECCCC
Q 008334 443 RGVLSVTVILAENLPASDLMGKADPYVVLTMKKS-ETRNKTRVVNDCLNPIWNQTFDFVVEDG--LHDMLIAEVWDHDTF 519 (569)
Q Consensus 443 ~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~-~~~~~T~~~~~t~nP~w~e~f~f~v~~~--~~~~l~i~V~d~~~~ 519 (569)
.+.|.|+|++|++|+..+..|.+||||+++++.. ..+++|+++++++||.|||+|.|.+... ....|.|+|||++..
T Consensus 18 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~~ 97 (284)
T 2r83_A 18 NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDRF 97 (284)
T ss_dssp TTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECCSS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECCCC
Confidence 4889999999999999998999999999999742 3578999999999999999999998643 457899999999988
Q ss_pred CC-ceeEEEEEecceeeecceEeEEEEcCCC------CCeEEEEEEEEeec
Q 008334 520 GK-DYMGRCILTLTRVILEGEYTDCFELDGT------KSGKLKLHLKWMPQ 563 (569)
Q Consensus 520 ~~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~------~~G~i~l~~~~~p~ 563 (569)
++ ++||++.++|.++..+.....|++|... ..|+|++.+.|.|.
T Consensus 98 ~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p~ 148 (284)
T 2r83_A 98 SKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVPT 148 (284)
T ss_dssp SCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEEETT
T ss_pred CCCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEecCc
Confidence 65 7999999999999887788999999643 46999999999874
No 55
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.73 E-value=3.7e-17 Score=148.90 Aligned_cols=105 Identities=25% Similarity=0.386 Sum_probs=91.9
Q ss_pred eEEEEEEEEeEcCCCCCC-CCCCCcEEEEEEeCCC---eeEeecccCCCCCCeeceEEEEEeccCCCCEEEEEEE-ECCC
Q 008334 444 GVLSVTVILAENLPASDL-MGKADPYVVLTMKKSE---TRNKTRVVNDCLNPIWNQTFDFVVEDGLHDMLIAEVW-DHDT 518 (569)
Q Consensus 444 ~~L~v~v~~a~~L~~~~~-~g~~dpyv~v~l~~~~---~~~~T~~~~~t~nP~w~e~f~f~v~~~~~~~l~i~V~-d~~~ 518 (569)
+.|.|+|++|++|+..+. .|.+||||++++.... .+++|+++++|+||+|||+|.|.+.. ....|.|+|| |++.
T Consensus 30 ~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~-~~~~L~~~V~~d~d~ 108 (171)
T 2q3x_A 30 GQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESP-QGKVLQVIVWGDYGR 108 (171)
T ss_dssp TEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCC-TTEEEEEEEEEECST
T ss_pred CEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecC-CCCEEEEEEEEcCCC
Confidence 789999999999999985 7899999999997533 37899999999999999999999863 5678999999 9998
Q ss_pred CCC-ceeEEEEEecceeeecceEeEEEEcCCC
Q 008334 519 FGK-DYMGRCILTLTRVILEGEYTDCFELDGT 549 (569)
Q Consensus 519 ~~~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~ 549 (569)
.++ ++||++.|+|.++..+....+||+|.+.
T Consensus 109 ~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 109 MDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp TCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 876 6999999999999877778999999765
No 56
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.73 E-value=5.6e-17 Score=143.10 Aligned_cols=107 Identities=26% Similarity=0.465 Sum_probs=92.3
Q ss_pred cceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCC---CeeEeecccCCCCCCeeceEEEEE-eccC--CCCEEEEEEEE
Q 008334 442 IRGVLSVTVILAENLPASDLMGKADPYVVLTMKKS---ETRNKTRVVNDCLNPIWNQTFDFV-VEDG--LHDMLIAEVWD 515 (569)
Q Consensus 442 ~~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~---~~~~~T~~~~~t~nP~w~e~f~f~-v~~~--~~~~l~i~V~d 515 (569)
..+.|.|+|++|++|+..+..|.+||||++++.+. ..+++|++++++.||+|||+|.|. +... ....|.|+|||
T Consensus 27 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d 106 (142)
T 2chd_A 27 DNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCD 106 (142)
T ss_dssp GGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEE
T ss_pred CCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEE
Confidence 35889999999999999998999999999999742 368899999999999999999998 5421 23689999999
Q ss_pred CCCCCC-ceeEEEEEecceeeecceEeEEEEcCC
Q 008334 516 HDTFGK-DYMGRCILTLTRVILEGEYTDCFELDG 548 (569)
Q Consensus 516 ~~~~~~-d~lG~~~i~l~~l~~~~~~~~w~~L~~ 548 (569)
++..++ ++||++.+++.++..+.....|++|+.
T Consensus 107 ~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 107 EDKFGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp ECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred CCCCCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 999876 699999999999987777788888865
No 57
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.72 E-value=1.5e-17 Score=151.46 Aligned_cols=109 Identities=25% Similarity=0.400 Sum_probs=95.4
Q ss_pred ccEEEEEEEEEeeccccCCC-CCCCCcEEEEEEecCCC--CeEEeeecCCCCCCeeccEEEEEEecCCCcEEEEEEE-EC
Q 008334 256 PVGTLEVKLVQAKGLTNKDL-IGKSDPYAVLFVRPLPE--KTKKSKTINNDLNPIWNEHFEFIVEDESTQHLVVRIY-DD 331 (569)
Q Consensus 256 ~~g~L~V~v~~a~~L~~~d~-~g~~dpyv~v~~~~~~~--~~~kT~~~~~t~nP~wne~f~f~v~~~~~~~L~i~v~-d~ 331 (569)
..|.|.|+|++|++|+.+|. .|.+||||++++.+.+. .+++|+++++++||+|||+|.|.+.. ....|.|+|| |+
T Consensus 28 ~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~-~~~~L~~~V~~d~ 106 (171)
T 2q3x_A 28 KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESP-QGKVLQVIVWGDY 106 (171)
T ss_dssp ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCC-TTEEEEEEEEEEC
T ss_pred CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecC-CCCEEEEEEEEcC
Confidence 46899999999999999985 68999999999985332 37899999999999999999999853 4678999999 99
Q ss_pred CCCCCCcceEEEEEEccccCCCceeEEEEEcccc
Q 008334 332 EGIQSSELIGCAQVRLCELEPGKVKDVWLKLVKD 365 (569)
Q Consensus 332 ~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~~ 365 (569)
+.+++|++||++.++|.++..+...+.|++|.+.
T Consensus 107 d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 107 GRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp STTCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCCCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 9999999999999999999888888999999754
No 58
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.72 E-value=9.8e-17 Score=144.42 Aligned_cols=108 Identities=27% Similarity=0.464 Sum_probs=90.7
Q ss_pred ceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCCC---eeEeecccCCCCCCeeceEEEEEeccC--CCCEEEEEEEECC
Q 008334 443 RGVLSVTVILAENLPASDLMGKADPYVVLTMKKSE---TRNKTRVVNDCLNPIWNQTFDFVVEDG--LHDMLIAEVWDHD 517 (569)
Q Consensus 443 ~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~~---~~~~T~~~~~t~nP~w~e~f~f~v~~~--~~~~l~i~V~d~~ 517 (569)
.+.|.|+|++|++|+..+..|.+||||++++.... .+++|+++++|.||+|||+|.|.+... ....|.|+|||++
T Consensus 24 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d 103 (159)
T 1tjx_A 24 AGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYD 103 (159)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECC
T ss_pred CCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECC
Confidence 48899999999999999989999999999996422 478999999999999999999998643 2467999999999
Q ss_pred CCCC-ceeEEEEEeccee----------ee--cceEeEEEEcCCCC
Q 008334 518 TFGK-DYMGRCILTLTRV----------IL--EGEYTDCFELDGTK 550 (569)
Q Consensus 518 ~~~~-d~lG~~~i~l~~l----------~~--~~~~~~w~~L~~~~ 550 (569)
..++ ++||++.|++..+ .. .....+||+|....
T Consensus 104 ~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~~~ 149 (159)
T 1tjx_A 104 KIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVEE 149 (159)
T ss_dssp SSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBCHH
T ss_pred CCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcCcc
Confidence 9865 7999999999853 22 23568999998653
No 59
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.72 E-value=3.7e-17 Score=146.13 Aligned_cols=112 Identities=27% Similarity=0.470 Sum_probs=95.3
Q ss_pred ccCccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecC--CCCeEEeeecCCCCCCeeccEEEEEEecC-CCcEEEEEEE
Q 008334 253 ELKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPL--PEKTKKSKTINNDLNPIWNEHFEFIVEDE-STQHLVVRIY 329 (569)
Q Consensus 253 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~--~~~~~kT~~~~~t~nP~wne~f~f~v~~~-~~~~L~i~v~ 329 (569)
+....|.|.|+|++|++|+..+ .|.+||||++++.+. ...+++|++++++.||+|||+|.|.+... ....|.|+||
T Consensus 22 y~~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~ 100 (153)
T 3fbk_A 22 IDAQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVW 100 (153)
T ss_dssp EEESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEE
T ss_pred EECCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEE
Confidence 3467899999999999999998 699999999999743 24679999999999999999999998422 2346999999
Q ss_pred ECCCCCC-CcceEEEEEEccccCC-CceeEEEEEcccc
Q 008334 330 DDEGIQS-SELIGCAQVRLCELEP-GKVKDVWLKLVKD 365 (569)
Q Consensus 330 d~~~~~~-d~~iG~~~i~l~~l~~-~~~~~~~~~L~~~ 365 (569)
|++..++ |++||++.+++.++.. +.....|++|.+.
T Consensus 101 d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~ 138 (153)
T 3fbk_A 101 NRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGE 138 (153)
T ss_dssp ECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCT
T ss_pred eCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCCh
Confidence 9999876 9999999999999974 6778899999754
No 60
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.72 E-value=2.6e-17 Score=146.13 Aligned_cols=107 Identities=22% Similarity=0.307 Sum_probs=90.3
Q ss_pred ceEEEEEEEEeEcCCCC-CCC------CCCCcEEEEEEeCC-CeeEeecccCCCCCCeeceEEEEEeccC--CCCEEEEE
Q 008334 443 RGVLSVTVILAENLPAS-DLM------GKADPYVVLTMKKS-ETRNKTRVVNDCLNPIWNQTFDFVVEDG--LHDMLIAE 512 (569)
Q Consensus 443 ~~~L~v~v~~a~~L~~~-~~~------g~~dpyv~v~l~~~-~~~~~T~~~~~t~nP~w~e~f~f~v~~~--~~~~l~i~ 512 (569)
.+.|.|+|++|++|+.. +.+ |.+||||++++... ..+++|++++++.||+|||+|.|.+... ....|.|+
T Consensus 25 ~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~ 104 (147)
T 2enp_A 25 HNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLT 104 (147)
T ss_dssp TTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEEE
T ss_pred CCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEEEE
Confidence 48899999999999984 433 57999999999742 3578999999999999999999998632 23589999
Q ss_pred EEECCCCCC-ceeEEEEEecceeeecceEeEEEEcCCC
Q 008334 513 VWDHDTFGK-DYMGRCILTLTRVILEGEYTDCFELDGT 549 (569)
Q Consensus 513 V~d~~~~~~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~ 549 (569)
|||++..++ ++||++.|+|.++........|++|...
T Consensus 105 V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~ 142 (147)
T 2enp_A 105 VVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIPS 142 (147)
T ss_dssp EECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBCC
T ss_pred EEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeecC
Confidence 999998875 6999999999999776667899999865
No 61
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.72 E-value=3.7e-17 Score=148.73 Aligned_cols=118 Identities=25% Similarity=0.379 Sum_probs=99.3
Q ss_pred cceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCCCeeEeecccCCCCCCeeceEEEEEeccCCCCEEEEEEEECCCCCC
Q 008334 442 IRGVLSVTVILAENLPASDLMGKADPYVVLTMKKSETRNKTRVVNDCLNPIWNQTFDFVVEDGLHDMLIAEVWDHDTFGK 521 (569)
Q Consensus 442 ~~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~~~~~l~i~V~d~~~~~~ 521 (569)
..+.|.|+|++|++|+..+..+.+||||++++++ .+++|+++++|+||+|||+|.|.+.. ...|.|+|||++..++
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~--~~~kT~v~~~tlnP~Wne~f~f~v~~--~~~L~~~V~D~d~~~~ 109 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTVDG--QSKKTEKCNNTNSPKWKQPLTVIVTP--VSKLHFRVWSHQTLKS 109 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEETT--EEEECCCCSSCSSCEEEEEEEEEECT--TCEEEEEEEECCSSSC
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEECC--EEeEccccCCCCCCeECCEEEEEeCC--CCEEEEEEEECCCCCC
Confidence 4688999999999999444345599999999976 88999999999999999999999863 7889999999998865
Q ss_pred -ceeEEEEEecceeeecc-----eEeEEEEcCCC-----CCeEEEEEEEEeec
Q 008334 522 -DYMGRCILTLTRVILEG-----EYTDCFELDGT-----KSGKLKLHLKWMPQ 563 (569)
Q Consensus 522 -d~lG~~~i~l~~l~~~~-----~~~~w~~L~~~-----~~G~i~l~~~~~p~ 563 (569)
++||++.++|.++.... ....|++|... ..|+|++.+.+.+.
T Consensus 110 dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~~ 162 (173)
T 2nq3_A 110 DVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQL 162 (173)
T ss_dssp CEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEEC
T ss_pred CceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeeec
Confidence 69999999999987532 23679999653 47999999999876
No 62
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.71 E-value=3.5e-18 Score=150.86 Aligned_cols=108 Identities=23% Similarity=0.453 Sum_probs=93.8
Q ss_pred cEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCCC-----------CeEEeeecCCCCCCeeccEEEEE-Eec--CCCc
Q 008334 257 VGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPE-----------KTKKSKTINNDLNPIWNEHFEFI-VED--ESTQ 322 (569)
Q Consensus 257 ~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~-----------~~~kT~~~~~t~nP~wne~f~f~-v~~--~~~~ 322 (569)
.|.|.|+|++|++|+.+|..|.+||||++++.+... .+++|+++++++||+|||+|.|. +.. ....
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~ 96 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK 96 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCC
Confidence 589999999999999999899999999999985432 25789999999999999999997 532 2456
Q ss_pred EEEEEEEECCCCCCCcceEEEEEEccccCCCceeEEEEEccc
Q 008334 323 HLVVRIYDDEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVK 364 (569)
Q Consensus 323 ~L~i~v~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 364 (569)
.|.|+|||++..++|++||++.+++.++..+...+.|++|.+
T Consensus 97 ~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 138 (142)
T 1rh8_A 97 TLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKE 138 (142)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBC
T ss_pred EEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCc
Confidence 899999999999899999999999999877667789999964
No 63
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.71 E-value=1.1e-16 Score=140.31 Aligned_cols=92 Identities=30% Similarity=0.479 Sum_probs=80.7
Q ss_pred ceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCC---CeeEeecccCCCCCCeeceEEEEEeccCC--CCEEEEEEEECC
Q 008334 443 RGVLSVTVILAENLPASDLMGKADPYVVLTMKKS---ETRNKTRVVNDCLNPIWNQTFDFVVEDGL--HDMLIAEVWDHD 517 (569)
Q Consensus 443 ~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~---~~~~~T~~~~~t~nP~w~e~f~f~v~~~~--~~~l~i~V~d~~ 517 (569)
.+.|.|+|++|++|+..+..|.+||||++++.+. ..+++|++++++.||+|||+|.|.+.... ...|.|+|||++
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d~~ 94 (138)
T 3n5a_A 15 ANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKD 94 (138)
T ss_dssp TTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEECC
T ss_pred CCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEECC
Confidence 4889999999999999998999999999999743 24789999999999999999999986432 368999999999
Q ss_pred CCCC-ceeEEEEEeccee
Q 008334 518 TFGK-DYMGRCILTLTRV 534 (569)
Q Consensus 518 ~~~~-d~lG~~~i~l~~l 534 (569)
..++ ++||++.+++.++
T Consensus 95 ~~~~~~~lG~~~i~l~~~ 112 (138)
T 3n5a_A 95 KLSRNDVIGKIYLSWKSG 112 (138)
T ss_dssp SSSCCEEEEEEEESSSSC
T ss_pred CCCCCcEEEEEEEccccC
Confidence 8865 6999999999964
No 64
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.71 E-value=1.1e-16 Score=143.01 Aligned_cols=91 Identities=29% Similarity=0.416 Sum_probs=74.6
Q ss_pred ceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCCC---eeEeecccCCCCCCeeceEEEEEeccC--CCCEEEEEEEECC
Q 008334 443 RGVLSVTVILAENLPASDLMGKADPYVVLTMKKSE---TRNKTRVVNDCLNPIWNQTFDFVVEDG--LHDMLIAEVWDHD 517 (569)
Q Consensus 443 ~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~~---~~~~T~~~~~t~nP~w~e~f~f~v~~~--~~~~l~i~V~d~~ 517 (569)
.+.|.|+|++|++|+..+..|.+||||++++.... .+++|+++++|+||+|||+|.|.+... ....|.|+|||++
T Consensus 29 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d 108 (153)
T 1w15_A 29 TNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSE 108 (153)
T ss_dssp TTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEECC
T ss_pred CCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeCC
Confidence 48899999999999999988999999999995422 267999999999999999999998754 2368999999999
Q ss_pred CCCC-ceeEEEEEecce
Q 008334 518 TFGK-DYMGRCILTLTR 533 (569)
Q Consensus 518 ~~~~-d~lG~~~i~l~~ 533 (569)
..++ ++||++.|++++
T Consensus 109 ~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 109 RGSRNEVIGRLVLGATA 125 (153)
T ss_dssp TTSCCEEEEEEEESTTC
T ss_pred CCCCCcEEEEEEECCCC
Confidence 8865 799999999988
No 65
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.71 E-value=7.1e-17 Score=145.32 Aligned_cols=111 Identities=32% Similarity=0.456 Sum_probs=94.4
Q ss_pred cCccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCCC--CeEEeeecCCCCCCeeccEEEEEEecC--CCcEEEEEEE
Q 008334 254 LKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPE--KTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRIY 329 (569)
Q Consensus 254 ~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~--~~~kT~~~~~t~nP~wne~f~f~v~~~--~~~~L~i~v~ 329 (569)
.+..|.|.|+|++|++|+..+..|.+||||++++.+.+. ..++|++++++.||+|||+|.|.+... ....|.|+||
T Consensus 21 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~ 100 (159)
T 1tjx_A 21 VPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVL 100 (159)
T ss_dssp ETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEE
T ss_pred cCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEE
Confidence 356799999999999999999889999999999975332 468999999999999999999998643 2458999999
Q ss_pred ECCCCCCCcceEEEEEEcccc------------CCCceeEEEEEccc
Q 008334 330 DDEGIQSSELIGCAQVRLCEL------------EPGKVKDVWLKLVK 364 (569)
Q Consensus 330 d~~~~~~d~~iG~~~i~l~~l------------~~~~~~~~~~~L~~ 364 (569)
|++..++|++||++.+++..+ .++.....|++|..
T Consensus 101 d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~ 147 (159)
T 1tjx_A 101 DYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV 147 (159)
T ss_dssp ECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBC
T ss_pred ECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcC
Confidence 999999999999999999853 34456778998864
No 66
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.70 E-value=3.1e-16 Score=142.22 Aligned_cols=106 Identities=29% Similarity=0.472 Sum_probs=88.9
Q ss_pred ceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCC---CeeEeecccCCCCCCeeceEEEEEeccC--CCCEEEEEEEECC
Q 008334 443 RGVLSVTVILAENLPASDLMGKADPYVVLTMKKS---ETRNKTRVVNDCLNPIWNQTFDFVVEDG--LHDMLIAEVWDHD 517 (569)
Q Consensus 443 ~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~---~~~~~T~~~~~t~nP~w~e~f~f~v~~~--~~~~l~i~V~d~~ 517 (569)
.+.|.|+|++|++|+..+..|.+||||++++.+. ..+++|+++++|+||+|||+|.|.+... ....|.|+|||++
T Consensus 36 ~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d 115 (166)
T 2cm5_A 36 QGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYD 115 (166)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECC
T ss_pred CCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEECC
Confidence 4889999999999999998999999999999752 3588999999999999999999999643 3568999999999
Q ss_pred CCCC-ceeEEEEEecceeee------------cceEeEEEEcCC
Q 008334 518 TFGK-DYMGRCILTLTRVIL------------EGEYTDCFELDG 548 (569)
Q Consensus 518 ~~~~-d~lG~~~i~l~~l~~------------~~~~~~w~~L~~ 548 (569)
..++ ++||++.|++.++.. ++...+|+.|.+
T Consensus 116 ~~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~~~~~~~~Wh~L~~ 159 (166)
T 2cm5_A 116 IGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQN 159 (166)
T ss_dssp SSSCCEEEEEEEEETTCCHHHHHHHHHHHHCTTCCEEEEEECBC
T ss_pred CCCCCcEEEeEEEecccCCchhHHHHHHHhCCCCcceEeeECCC
Confidence 9875 799999999998521 233467777754
No 67
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.70 E-value=7.3e-17 Score=141.58 Aligned_cols=97 Identities=25% Similarity=0.458 Sum_probs=85.1
Q ss_pred cCccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCCC--CeEEeeecCCCCCCeeccEEEEEEecCC--CcEEEEEEE
Q 008334 254 LKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPE--KTKKSKTINNDLNPIWNEHFEFIVEDES--TQHLVVRIY 329 (569)
Q Consensus 254 ~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~--~~~kT~~~~~t~nP~wne~f~f~v~~~~--~~~L~i~v~ 329 (569)
....|.|.|+|++|++|+..+..|.+||||++++.+.+. .+++|++++++.||+|||+|.|.+.... ...|.|+||
T Consensus 12 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~ 91 (138)
T 3n5a_A 12 NPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVM 91 (138)
T ss_dssp ETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEE
T ss_pred cCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEE
Confidence 356799999999999999999889999999999975322 4788999999999999999999986442 368999999
Q ss_pred ECCCCCCCcceEEEEEEcccc
Q 008334 330 DDEGIQSSELIGCAQVRLCEL 350 (569)
Q Consensus 330 d~~~~~~d~~iG~~~i~l~~l 350 (569)
|++..++|++||++.+++.++
T Consensus 92 d~~~~~~~~~lG~~~i~l~~~ 112 (138)
T 3n5a_A 92 DKDKLSRNDVIGKIYLSWKSG 112 (138)
T ss_dssp ECCSSSCCEEEEEEEESSSSC
T ss_pred ECCCCCCCcEEEEEEEccccC
Confidence 999999999999999999864
No 68
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.69 E-value=2.1e-16 Score=143.32 Aligned_cols=97 Identities=25% Similarity=0.412 Sum_probs=85.9
Q ss_pred cCccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCC--CCeEEeeecCCCCCCeeccEEEEEEecC--CCcEEEEEEE
Q 008334 254 LKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLP--EKTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRIY 329 (569)
Q Consensus 254 ~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~--~~~~kT~~~~~t~nP~wne~f~f~v~~~--~~~~L~i~v~ 329 (569)
.+..|.|.|+|++|++|+..+..|.+||||++++.+.. ..+++|+++++++||+|||+|.|.+... ....|.|+||
T Consensus 33 ~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~ 112 (166)
T 2cm5_A 33 STQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVW 112 (166)
T ss_dssp ETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEE
T ss_pred ECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEE
Confidence 35689999999999999999988999999999998532 3689999999999999999999998643 3568999999
Q ss_pred ECCCCCCCcceEEEEEEcccc
Q 008334 330 DDEGIQSSELIGCAQVRLCEL 350 (569)
Q Consensus 330 d~~~~~~d~~iG~~~i~l~~l 350 (569)
|++..++|++||++.+++.++
T Consensus 113 d~d~~~~~~~iG~~~i~l~~~ 133 (166)
T 2cm5_A 113 DYDIGKSNDYIGGCQLGISAK 133 (166)
T ss_dssp ECCSSSCCEEEEEEEEETTCC
T ss_pred ECCCCCCCcEEEeEEEecccC
Confidence 999999999999999999875
No 69
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.68 E-value=1.7e-16 Score=141.84 Aligned_cols=108 Identities=24% Similarity=0.343 Sum_probs=84.0
Q ss_pred cCccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCCCC--eEEeeecCCCCCCeeccEEEEEEecC--CCcEEEEEEE
Q 008334 254 LKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEK--TKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRIY 329 (569)
Q Consensus 254 ~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~--~~kT~~~~~t~nP~wne~f~f~v~~~--~~~~L~i~v~ 329 (569)
.+..|.|.|+|++|++|+..+..|.+||||++++.+.+.. +++|+++++++||+|||+|.|.+... ....|.|+||
T Consensus 26 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~ 105 (153)
T 1w15_A 26 QSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVL 105 (153)
T ss_dssp ETTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEE
T ss_pred cCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEE
Confidence 3567999999999999999998899999999999753332 67999999999999999999998754 2368999999
Q ss_pred ECCCCCCCcceEEEEEEccccCCCceeEEEEEcc
Q 008334 330 DDEGIQSSELIGCAQVRLCELEPGKVKDVWLKLV 363 (569)
Q Consensus 330 d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~ 363 (569)
|++.+++|++||++.+++.+ .+...+.|+.|.
T Consensus 106 d~d~~~~~~~lG~~~i~l~~--~~~~~~~W~~l~ 137 (153)
T 1w15_A 106 DSERGSRNEVIGRLVLGATA--EGSGGGHWKEIC 137 (153)
T ss_dssp ECCTTSCCEEEEEEEESTTC--CSHHHHHHHHHH
T ss_pred eCCCCCCCcEEEEEEECCCC--CchHHHHHHHHH
Confidence 99999999999999999987 223334454443
No 70
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.67 E-value=5.9e-16 Score=134.09 Aligned_cols=118 Identities=21% Similarity=0.311 Sum_probs=83.8
Q ss_pred ccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCCCCeEEeeecC-CCCCCeeccEEEEEEecCCCcEEEEEEEECCCC
Q 008334 256 PVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTIN-NDLNPIWNEHFEFIVEDESTQHLVVRIYDDEGI 334 (569)
Q Consensus 256 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~-~t~nP~wne~f~f~v~~~~~~~L~i~v~d~~~~ 334 (569)
+.|.|.|+|++|+++.. .|.+||||+++ . +..+|+++. ++.||+|||+|.|.+.+. ...|.|+|||++ .
T Consensus 3 ~~~~L~V~V~~A~~l~~---~g~~DPYv~v~-~----~~~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d-~ 72 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA---QEKFNTYVTLK-V----QNVKSTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG-L 72 (131)
T ss_dssp CCEEEEEEEEEEECSSC---GGGCEEEEEEE-E----TTEEEECCCEESSSCEEEEEEEEEECCC-SSEEEEEEEECC-S
T ss_pred cceEEEEEEEEeECCCC---CCCcCeEEEEE-e----cCEEEeEecCCCCCceECCEEEEEEeCC-CCeEEEEEEECC-C
Confidence 46899999999998852 57899999999 3 234555554 799999999999999864 457999999999 8
Q ss_pred CCCcceEEEEEEccccCCCc--eeEEEEEccccccccCCCccee-------EEEEEEEE
Q 008334 335 QSSELIGCAQVRLCELEPGK--VKDVWLKLVKDLDVQRDTKYRG-------QVHLELLY 384 (569)
Q Consensus 335 ~~d~~iG~~~i~l~~l~~~~--~~~~~~~L~~~~~~~~~~~~~G-------~l~l~l~~ 384 (569)
++|++||++.++|.++.... ....|.++..... ..+++..| .+.+++.|
T Consensus 73 ~~dd~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~-~~~g~~~G~~~p~~~~~~~~~~~ 130 (131)
T 2cjt_A 73 IWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAI-MADSEICGTKDPTFHRILLDAHF 130 (131)
T ss_dssp SCEEEEEEEEEEGGGSCBCSSCCCCEEEECBC-----------CCSCCCCCEEEEEEEE
T ss_pred CCCCeEEEEEEEHHHhhhcCCCCccccEEcccccc-cCCCcCcceECCCccEEEEEEEe
Confidence 89999999999999985433 1225666543221 12233333 47776665
No 71
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.65 E-value=7.6e-16 Score=131.07 Aligned_cols=120 Identities=20% Similarity=0.274 Sum_probs=102.3
Q ss_pred ccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCCCCeEEeeecC-CCCCCeeccEEEEEEecC--CCcEEEEEEEECC
Q 008334 256 PVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTIN-NDLNPIWNEHFEFIVEDE--STQHLVVRIYDDE 332 (569)
Q Consensus 256 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~-~t~nP~wne~f~f~v~~~--~~~~L~i~v~d~~ 332 (569)
..-.|+|+|.+|++|+ |++|||+++.+. +.+++|++++ ++.||+|||.|.|.+..+ .+..|.+.|||++
T Consensus 19 ~~msL~V~l~~a~~Lp-----g~~Dp~akv~FR---g~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~ 90 (144)
T 3l9b_A 19 SHMALIVHLKTVSELR-----GRADRIAKVTFR---GQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYS 90 (144)
T ss_dssp CCEEEEEEEEEEESCC-----SCEEEEEEEEET---TEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEEC
T ss_pred CcEEEEEEEEEecCCC-----CCCCCeEEEEEe---ccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECc
Confidence 3457999999999998 678999999996 7899999997 699999999999999754 4668999999999
Q ss_pred CCCCCcceEEEEEEccccCCCceeEEEEEccccccccCCCcceeEEEEEEEEEec
Q 008334 333 GIQSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQRDTKYRGQVHLELLYCPF 387 (569)
Q Consensus 333 ~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~G~l~l~l~~~p~ 387 (569)
+++++++||++.++|+++........+.+|.+. +.....++|.++++|.|+
T Consensus 91 ~v~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~----n~~~~~a~I~l~l~Y~pp 141 (144)
T 3l9b_A 91 KVFSNKLIGTFRMVLQKVVEENRVEVSDTLIDD----NNAIIKTSLSMEVRYQAA 141 (144)
T ss_dssp TTSCCEEEEEEEEESHHHHHHSEEEEEEEEECT----TSCEEEEEEEEEEEEEET
T ss_pred cccCCCEEEEEEEEhHHhccCCeEEEeecccCC----CCCccccEEEEEEEecCC
Confidence 999999999999999999776666666666542 234456899999999984
No 72
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.63 E-value=1.4e-14 Score=153.77 Aligned_cols=169 Identities=18% Similarity=0.263 Sum_probs=123.4
Q ss_pred Eecccc-eeeEEEEEccccccC-CcchhHHHHHHHHHHHhhhccc-----c--ceEeeeCCCCC------------c-cc
Q 008334 194 SLREKK-KLDFKLKVVGGDIST-IPGLSDSIEATIHDAIEDSITW-----P--VRKIVPILPGD------------Y-SE 251 (569)
Q Consensus 194 ~f~~~p-~ldf~l~~~g~~i~~-iP~l~~~~~~~i~~~l~~~~~~-----P--~~~~~~l~~~~------------~-~~ 251 (569)
++...| .|++.+.++- ++.. .+--...++.++...+.+.-.+ | |-. .++. |. . ..
T Consensus 310 Sv~~~P~~I~~~l~PI~-~Lv~~~~~kr~nLk~Ai~~Yl~e~~~c~~C~~PC~nn~-~~l~-g~~C~C~C~~~~~t~~~~ 386 (540)
T 3nsj_A 310 SLPSNPGLVDYSLEPLH-TLLEEQNPKREALRQAISHYIMSRARWQNCSRPCRSGQ-HKSS-HDSCQCECQDSKVTNQDC 386 (540)
T ss_dssp HTTTSCEEEEEEEEEGG-GGSCTTCTHHHHHHHHHHHHHHHTCBCCCTTSCCBTTE-EECS-SCTTCEEESCTTTBCGGG
T ss_pred HHhhCCceEEEEEEEHH-HhcCCcHHHHHHHHHHHHHHHHhcCchhhhcccccCCC-ccCC-CCceEeeCCCCCCccccc
Confidence 444444 5888888874 3321 2333456777777777765444 3 221 1221 11 0 11
Q ss_pred ccc-CccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCCCCeEEeeecCCCCCCeeccEEEEEEec-CCCcEEEEEEE
Q 008334 252 LEL-KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVED-ESTQHLVVRIY 329 (569)
Q Consensus 252 ~~~-~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~-~~~~~L~i~v~ 329 (569)
.+. ...|.|+|+|++|++|+. |..|++||||+++++ ++.++|+++++++||+|||+|.|.+.+ ...+.|.|+||
T Consensus 387 C~~~~~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~---~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~ 462 (540)
T 3nsj_A 387 CPRQRGLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFG---GQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVW 462 (540)
T ss_dssp CBSSTTEEEEEEEEEEEESCCC-SSCSCCCEEEEEEET---TEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEE
T ss_pred ccccCcccEEEEEEEEccCCCc-ccCCCcCeEEEEEEC---CEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEE
Confidence 222 358999999999999998 989999999999997 567999999999999999999998653 35678999999
Q ss_pred ECCCCCCCcceEEEEEEccccCCCceeEEEEEccccccccCCCcceeEEEEEEEE
Q 008334 330 DDEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQRDTKYRGQVHLELLY 384 (569)
Q Consensus 330 d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~G~l~l~l~~ 384 (569)
|+|..++||+||.+.++|. . ...+.|++|. .|.|++.++.
T Consensus 463 D~D~~~~dD~LG~~~~~L~---~-g~~~~~~~l~-----------~G~l~~~~~~ 502 (540)
T 3nsj_A 463 DADYGWDDDLLGSCDRSPH---S-GFHEVTCELN-----------HGRVKFSYHA 502 (540)
T ss_dssp ECCSSSCCEEEEEEEECCC---S-EEEEEEEECS-----------SSEEEEEEEE
T ss_pred ECCCCCCCCEEEEEEEEee---C-CcEEEEEEcC-----------CeEEEEEEEE
Confidence 9999989999999999987 2 3467888762 4788887764
No 73
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.62 E-value=2e-15 Score=150.25 Aligned_cols=121 Identities=30% Similarity=0.477 Sum_probs=99.5
Q ss_pred ceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeC-CCeeEeecccCCCCCCeeceEEEEEeccC--CCCEEEEEEEECCCC
Q 008334 443 RGVLSVTVILAENLPASDLMGKADPYVVLTMKK-SETRNKTRVVNDCLNPIWNQTFDFVVEDG--LHDMLIAEVWDHDTF 519 (569)
Q Consensus 443 ~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~-~~~~~~T~~~~~t~nP~w~e~f~f~v~~~--~~~~l~i~V~d~~~~ 519 (569)
.+.|.|+|++|++|+..+..|.+||||++++.. +..+++|+++++|+||+|||+|.|.+... ....|.|+|||++..
T Consensus 19 ~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~~ 98 (296)
T 1dqv_A 19 SDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFDRF 98 (296)
T ss_dssp SCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECCSS
T ss_pred CCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcCCC
Confidence 488999999999999999999999999999942 24678999999999999999999998633 345899999999988
Q ss_pred CC-ceeEEEEEe-cceeee-cceEeEEEEcCCC-----CCeEEEEEEEEeec
Q 008334 520 GK-DYMGRCILT-LTRVIL-EGEYTDCFELDGT-----KSGKLKLHLKWMPQ 563 (569)
Q Consensus 520 ~~-d~lG~~~i~-l~~l~~-~~~~~~w~~L~~~-----~~G~i~l~~~~~p~ 563 (569)
++ ++||++.++ +.++.. ......|++|... ..|+|++.+.|.|.
T Consensus 99 ~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~vsl~y~~~ 150 (296)
T 1dqv_A 99 SRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSLCYLPT 150 (296)
T ss_dssp SCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCCSCCCEEEEEEEEETT
T ss_pred CCCceEEEEEeccccccccCCccceeeeccccccccccccceEEEEEEeccc
Confidence 65 799999996 545443 2345789999642 46999999999874
No 74
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.62 E-value=1e-15 Score=164.48 Aligned_cols=120 Identities=22% Similarity=0.416 Sum_probs=104.8
Q ss_pred CccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCCCCeEEeeecCCCCCCeeccEEEEEEecCCCcEEEEEEEECCCC
Q 008334 255 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDESTQHLVVRIYDDEGI 334 (569)
Q Consensus 255 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~~~~L~i~v~d~~~~ 334 (569)
...|.|.|+|++|++|+++|..|.+||||+++++ .++++|+++++++||+|||+|.|.+.....+.|.|+|||+|.+
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~---~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~ 460 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPNGKSNPYCEISMG---SQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQF 460 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTTSCCCEEEEEEET---TEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSS
T ss_pred CCCceEEEEeceeecCCCCCCCCCCCeEEEEEEC---CeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCC
Confidence 4679999999999999999999999999999996 6789999999999999999999999877778899999999999
Q ss_pred CCCcceEEEEEEccccCCCce----eEEEEEccccccccCCCcceeEEEEEEEEE
Q 008334 335 QSSELIGCAQVRLCELEPGKV----KDVWLKLVKDLDVQRDTKYRGQVHLELLYC 385 (569)
Q Consensus 335 ~~d~~iG~~~i~l~~l~~~~~----~~~~~~L~~~~~~~~~~~~~G~l~l~l~~~ 385 (569)
++|++||++.+++.++..+.. ...|+++. +...|+|++.+.+.
T Consensus 461 ~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~--------~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 461 SPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLH--------EVPTGEVWVRFDLQ 507 (510)
T ss_dssp SSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECB--------SSSSCEEEEEEEEE
T ss_pred CCCCceEEEEEEHHHhccccCCCCceeeeecCC--------CCCCceEEEEEEEE
Confidence 999999999999999875443 56888874 34679998888764
No 75
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.62 E-value=2.7e-15 Score=161.16 Aligned_cols=119 Identities=30% Similarity=0.501 Sum_probs=106.1
Q ss_pred ccceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCCCeeEeecccCCCCCCeeceEEEEEeccCCCCEEEEEEEECCCCC
Q 008334 441 IIRGVLSVTVILAENLPASDLMGKADPYVVLTMKKSETRNKTRVVNDCLNPIWNQTFDFVVEDGLHDMLIAEVWDHDTFG 520 (569)
Q Consensus 441 ~~~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~~~~~~l~i~V~d~~~~~ 520 (569)
...+.|.|+|++|++|+..+..|.+||||++++++ .+++|+++++|+||.|||+|.|.+.......|.|+|||++..+
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~--~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~ 461 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPNGKSNPYCEISMGS--QSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFS 461 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETT--EEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSS
T ss_pred CCCceEEEEeceeecCCCCCCCCCCCeEEEEEECC--eeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCC
Confidence 35689999999999999999999999999999965 7889999999999999999999998777788999999999987
Q ss_pred C-ceeEEEEEecceeeecce----EeEEEEcCCCCCeEEEEEEEEe
Q 008334 521 K-DYMGRCILTLTRVILEGE----YTDCFELDGTKSGKLKLHLKWM 561 (569)
Q Consensus 521 ~-d~lG~~~i~l~~l~~~~~----~~~w~~L~~~~~G~i~l~~~~~ 561 (569)
+ ++||++.+++.++..+.. ...|++|.+...|+|++.+++.
T Consensus 462 ~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 462 PDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEVPTGEVWVRFDLQ 507 (510)
T ss_dssp SCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSSSSCEEEEEEEEE
T ss_pred CCCceEEEEEEHHHhccccCCCCceeeeecCCCCCCceEEEEEEEE
Confidence 5 799999999999876543 6899999999999999988764
No 76
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.58 E-value=1e-14 Score=131.47 Aligned_cols=88 Identities=20% Similarity=0.279 Sum_probs=74.4
Q ss_pred CccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCCCCeEEeeecC-CCCCCeeccEEEEEEecCCCcEEEEEEEECCC
Q 008334 255 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTIN-NDLNPIWNEHFEFIVEDESTQHLVVRIYDDEG 333 (569)
Q Consensus 255 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~-~t~nP~wne~f~f~v~~~~~~~L~i~v~d~~~ 333 (569)
.+.|.|.|+|++|+++. ..|.+||||+++ . +..+|+++. ++.||+|||+|.|.+.+. ...|.|+|||++
T Consensus 11 g~~~~L~V~V~~A~~l~---~~g~~DPYV~v~-~----~~~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d- 80 (167)
T 2cjs_A 11 GILSLLCVGVKKAKFDG---AQEKFNTYVTLK-V----QNVESTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG- 80 (167)
T ss_dssp SCCCEEEEEEEEEECSS---CGGGCEEEEEEE-E----TTEEEECCCEESSSCEEEEEEEEECCCT-TSEEEEEEEECC-
T ss_pred CceEEEEEEEEEEECCC---CCCCCCeEEEEE-e----cceEEEEecCCCCCCCCCCEEEEEeeCC-CCEEEEEEEECC-
Confidence 35789999999999884 258899999999 3 335666665 699999999999999864 457999999999
Q ss_pred CCCCcceEEEEEEccccCC
Q 008334 334 IQSSELIGCAQVRLCELEP 352 (569)
Q Consensus 334 ~~~d~~iG~~~i~l~~l~~ 352 (569)
.++|++||++.++|.++..
T Consensus 81 ~~~dd~iG~~~i~L~~l~~ 99 (167)
T 2cjs_A 81 LIWDTMVGTVWIPLRTIRQ 99 (167)
T ss_dssp SSCCEEEEEEEEEGGGSCB
T ss_pred CCCCceEEEEEEEHHHhcc
Confidence 8889999999999999854
No 77
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.57 E-value=2.8e-14 Score=121.41 Aligned_cols=113 Identities=17% Similarity=0.230 Sum_probs=97.2
Q ss_pred eEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCCCeeEeecccC-CCCCCeeceEEEEEeccC--CCCEEEEEEEECCCCC
Q 008334 444 GVLSVTVILAENLPASDLMGKADPYVVLTMKKSETRNKTRVVN-DCLNPIWNQTFDFVVEDG--LHDMLIAEVWDHDTFG 520 (569)
Q Consensus 444 ~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~~~~~~T~~~~-~t~nP~w~e~f~f~v~~~--~~~~l~i~V~d~~~~~ 520 (569)
--|+|++.+|.+|+ |.+|||+++.+.+ .+++|++++ ++.||+|||.|+|++..+ ..+.|.+.|+|++.++
T Consensus 21 msL~V~l~~a~~Lp-----g~~Dp~akv~FRg--~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~ 93 (144)
T 3l9b_A 21 MALIVHLKTVSELR-----GRADRIAKVTFRG--QSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVF 93 (144)
T ss_dssp EEEEEEEEEEESCC-----SCEEEEEEEEETT--EEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTS
T ss_pred EEEEEEEEEecCCC-----CCCCCeEEEEEec--cceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECcccc
Confidence 45999999999998 5789999999964 889999998 699999999999999754 4579999999999987
Q ss_pred C-ceeEEEEEecceeeecceEeEEEEcCCCC----CeEEEEEEEEeec
Q 008334 521 K-DYMGRCILTLTRVILEGEYTDCFELDGTK----SGKLKLHLKWMPQ 563 (569)
Q Consensus 521 ~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~~----~G~i~l~~~~~p~ 563 (569)
+ .+||++.++|.++..++...-+-+|.+.+ .+.|.+++.|.|-
T Consensus 94 ~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~a~I~l~l~Y~pp 141 (144)
T 3l9b_A 94 SNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIKTSLSMEVRYQAA 141 (144)
T ss_dssp CCEEEEEEEEESHHHHHHSEEEEEEEEECTTSCEEEEEEEEEEEEEET
T ss_pred CCCEEEEEEEEhHHhccCCeEEEeecccCCCCCccccEEEEEEEecCC
Confidence 6 69999999999999888776666664432 5899999999984
No 78
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.55 E-value=5e-15 Score=161.79 Aligned_cols=110 Identities=28% Similarity=0.571 Sum_probs=100.2
Q ss_pred cCccEEEEEEEEEeecccc---CCCCCCCCcEEEEEEecCCCCeEEeeecCCCCCCeeccEEEEEEecCCCcEEEEEEEE
Q 008334 254 LKPVGTLEVKLVQAKGLTN---KDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDESTQHLVVRIYD 330 (569)
Q Consensus 254 ~~~~g~L~V~v~~a~~L~~---~d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~~~~L~i~v~d 330 (569)
..+.|.|+|+|++|++|+. +|..|.+||||++++.+...+++||+++++++||+|||+|.|.+.....+.|.|+|||
T Consensus 14 ~~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D 93 (749)
T 1cjy_A 14 HQYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMD 93 (749)
T ss_dssp CCCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEE
T ss_pred CCCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEE
Confidence 3678999999999999998 7888999999999998554578999999999999999999999987667789999999
Q ss_pred CCCCCCCcceEEEEEEccccCCCceeEEEEEccc
Q 008334 331 DEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVK 364 (569)
Q Consensus 331 ~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 364 (569)
+|.++ |++||++.+++.++..+...+.|++|.+
T Consensus 94 ~D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~ 126 (749)
T 1cjy_A 94 ANYVM-DETLGTATFTVSSMKVGEKKEVPFIFNQ 126 (749)
T ss_dssp CCSSS-CEEEEEECCBSTTSCTTCCCCEEEEETT
T ss_pred CCCCC-CceeEEEEEEHHHcCCCCceEEEEecCC
Confidence 99998 9999999999999988888899999964
No 79
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.54 E-value=5.9e-14 Score=121.41 Aligned_cols=88 Identities=24% Similarity=0.317 Sum_probs=71.6
Q ss_pred cceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCCCeeEeecccC-CCCCCeeceEEEEEeccCCCCEEEEEEEECCCCC
Q 008334 442 IRGVLSVTVILAENLPASDLMGKADPYVVLTMKKSETRNKTRVVN-DCLNPIWNQTFDFVVEDGLHDMLIAEVWDHDTFG 520 (569)
Q Consensus 442 ~~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~~~~~~T~~~~-~t~nP~w~e~f~f~v~~~~~~~l~i~V~d~~~~~ 520 (569)
..+.|.|+|++|++++. .|.+||||+++ +. ..+|++++ ++.||+|||+|.|.+.+. ...|.|+|||++ .+
T Consensus 3 ~~~~L~V~V~~A~~l~~---~g~~DPYv~v~-~~---~~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d-~~ 73 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA---QEKFNTYVTLK-VQ---NVKSTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG-LI 73 (131)
T ss_dssp CCEEEEEEEEEEECSSC---GGGCEEEEEEE-ET---TEEEECCCEESSSCEEEEEEEEEECCC-SSEEEEEEEECC-SS
T ss_pred cceEEEEEEEEeECCCC---CCCcCeEEEEE-ec---CEEEeEecCCCCCceECCEEEEEEeCC-CCeEEEEEEECC-CC
Confidence 35899999999998853 67899999999 32 23454444 699999999999999853 567999999999 65
Q ss_pred C-ceeEEEEEecceeeecc
Q 008334 521 K-DYMGRCILTLTRVILEG 538 (569)
Q Consensus 521 ~-d~lG~~~i~l~~l~~~~ 538 (569)
. ++||++.|+|+++....
T Consensus 74 ~dd~iG~~~i~l~~l~~~~ 92 (131)
T 2cjt_A 74 WDTMVGTVWIPLRTIRQSN 92 (131)
T ss_dssp CEEEEEEEEEEGGGSCBCS
T ss_pred CCCeEEEEEEEHHHhhhcC
Confidence 5 79999999999986543
No 80
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.52 E-value=9.7e-14 Score=147.24 Aligned_cols=110 Identities=26% Similarity=0.299 Sum_probs=94.7
Q ss_pred cceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCCCeeEeecccCCCCCCeeceEEEEEecc-CCCCEEEEEEEECCCCC
Q 008334 442 IRGVLSVTVILAENLPASDLMGKADPYVVLTMKKSETRNKTRVVNDCLNPIWNQTFDFVVED-GLHDMLIAEVWDHDTFG 520 (569)
Q Consensus 442 ~~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~~~~~~T~~~~~t~nP~w~e~f~f~v~~-~~~~~l~i~V~d~~~~~ 520 (569)
..+.|+|+|++|++|+. |..|.+||||++++++ .+++|+++++++||+|||+|.|.+.+ .....|.|+|||+|..+
T Consensus 392 ~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~--~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~ 468 (540)
T 3nsj_A 392 GLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGG--QEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGW 468 (540)
T ss_dssp TEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETT--EEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSS
T ss_pred cccEEEEEEEEccCCCc-ccCCCcCeEEEEEECC--EeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCC
Confidence 36899999999999998 8899999999999975 56999999999999999999998643 35678999999999987
Q ss_pred C-ceeEEEEEecceeeecceEeEEEEcCCCCCeEEEEEEEEe
Q 008334 521 K-DYMGRCILTLTRVILEGEYTDCFELDGTKSGKLKLHLKWM 561 (569)
Q Consensus 521 ~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~~~G~i~l~~~~~ 561 (569)
+ |+||++.++|.. +....|++|+ .|.|+++++..
T Consensus 469 ~dD~LG~~~~~L~~----g~~~~~~~l~---~G~l~~~~~~~ 503 (540)
T 3nsj_A 469 DDDLLGSCDRSPHS----GFHEVTCELN---HGRVKFSYHAK 503 (540)
T ss_dssp CCEEEEEEEECCCS----EEEEEEEECS---SSEEEEEEEEE
T ss_pred CCCEEEEEEEEeeC----CcEEEEEEcC---CeEEEEEEEEE
Confidence 6 799999999983 4467899876 48888877654
No 81
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.50 E-value=1.9e-13 Score=148.33 Aligned_cols=124 Identities=17% Similarity=0.306 Sum_probs=102.1
Q ss_pred ccEEEEEEEEEeeccccCCC--CCCCCcEEEEEEecC--CCCeEEeeecCCC-CCCeeccEEEEEEecCCCcEEEEEEEE
Q 008334 256 PVGTLEVKLVQAKGLTNKDL--IGKSDPYAVLFVRPL--PEKTKKSKTINND-LNPIWNEHFEFIVEDESTQHLVVRIYD 330 (569)
Q Consensus 256 ~~g~L~V~v~~a~~L~~~d~--~g~~dpyv~v~~~~~--~~~~~kT~~~~~t-~nP~wne~f~f~v~~~~~~~L~i~v~d 330 (569)
..+.|+|+|++|++|+..+. .+.+||||++.+... ...++||++++++ .||+|||+|.|.+..+....|+|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 57899999999999998874 688999999999632 2357899999887 999999999999987666789999999
Q ss_pred CCCCCCCcceEEEEEEccccCCCceeEEEEEccccccccCCCcceeEEEEEEEEE
Q 008334 331 DEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQRDTKYRGQVHLELLYC 385 (569)
Q Consensus 331 ~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~G~l~l~l~~~ 385 (569)
+|..++|++||++.++|..|..|. .|++|.... ...-..|.|.+.+.+.
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~G~---r~v~L~d~~---g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQGY---RHVHLLSKN---GDQHPSATLFVKISIQ 623 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCCEE---EEEEEECTT---SCEEEEEEEEEEEEEE
T ss_pred cCCCCCCceeEEEEEEHHHcCCCc---EEEeCCCCC---cCCCCceEEEEEEEEE
Confidence 999989999999999999998753 588886431 1112467888888763
No 82
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.47 E-value=1e-13 Score=151.55 Aligned_cols=113 Identities=23% Similarity=0.480 Sum_probs=99.2
Q ss_pred cceEEEEEEEEeEcCCC---CCCCCCCCcEEEEEEeCC-CeeEeecccCCCCCCeeceEEEEEeccCCCCEEEEEEEECC
Q 008334 442 IRGVLSVTVILAENLPA---SDLMGKADPYVVLTMKKS-ETRNKTRVVNDCLNPIWNQTFDFVVEDGLHDMLIAEVWDHD 517 (569)
Q Consensus 442 ~~~~L~v~v~~a~~L~~---~~~~g~~dpyv~v~l~~~-~~~~~T~~~~~t~nP~w~e~f~f~v~~~~~~~l~i~V~d~~ 517 (569)
..+.|+|+|++|++|+. .|..|.+||||++++++. ..+++|+++++++||+|||+|.|.+.......|.|+|||++
T Consensus 16 ~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~D 95 (749)
T 1cjy_A 16 YSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDAN 95 (749)
T ss_dssp CCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEECC
T ss_pred CccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEECC
Confidence 46899999999999998 777889999999999742 36789999999999999999999998766778999999999
Q ss_pred CCCCceeEEEEEecceeeecceEeEEEEcCCCCCeEEEE
Q 008334 518 TFGKDYMGRCILTLTRVILEGEYTDCFELDGTKSGKLKL 556 (569)
Q Consensus 518 ~~~~d~lG~~~i~l~~l~~~~~~~~w~~L~~~~~G~i~l 556 (569)
..++++||++.|+|.++..+.....|++|.+. +++.+
T Consensus 96 ~~~ddfIG~v~I~L~~L~~g~~~~~w~~L~~~--~e~~l 132 (749)
T 1cjy_A 96 YVMDETLGTATFTVSSMKVGEKKEVPFIFNQV--TEMVL 132 (749)
T ss_dssp SSSCEEEEEECCBSTTSCTTCCCCEEEEETTT--EEEEE
T ss_pred CCCCceeEEEEEEHHHcCCCCceEEEEecCCC--ceEee
Confidence 98867999999999999777777999999875 44444
No 83
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.46 E-value=6.6e-13 Score=119.61 Aligned_cols=112 Identities=20% Similarity=0.221 Sum_probs=83.6
Q ss_pred ceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCCCeeEeecccC-CCCCCeeceEEEEEeccCCCCEEEEEEEECCCCC-
Q 008334 443 RGVLSVTVILAENLPASDLMGKADPYVVLTMKKSETRNKTRVVN-DCLNPIWNQTFDFVVEDGLHDMLIAEVWDHDTFG- 520 (569)
Q Consensus 443 ~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~~~~~~T~~~~-~t~nP~w~e~f~f~v~~~~~~~l~i~V~d~~~~~- 520 (569)
.+.|.|+|++|++++ ..|.+||||+++ +. ..+|++++ ++.||+|||+|.|.+.+. ...|.|+|||++ .+
T Consensus 13 ~~~L~V~V~~A~~l~---~~g~~DPYV~v~-~~---~~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d-~~~ 83 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDG---AQEKFNTYVTLK-VQ---NVESTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG-LIW 83 (167)
T ss_dssp CCEEEEEEEEEECSS---CGGGCEEEEEEE-ET---TEEEECCCEESSSCEEEEEEEEECCCT-TSEEEEEEEECC-SSC
T ss_pred eEEEEEEEEEEECCC---CCCCCCeEEEEE-ec---ceEEEEecCCCCCCCCCCEEEEEeeCC-CCEEEEEEEECC-CCC
Confidence 579999999999885 267899999999 32 34565555 699999999999999864 567999999999 54
Q ss_pred CceeEEEEEecceeeecce------EeEEEEcC---CC-------CCeEEEEEEEEeec
Q 008334 521 KDYMGRCILTLTRVILEGE------YTDCFELD---GT-------KSGKLKLHLKWMPQ 563 (569)
Q Consensus 521 ~d~lG~~~i~l~~l~~~~~------~~~w~~L~---~~-------~~G~i~l~~~~~p~ 563 (569)
+++||++.|+|+++..... ...||.+. +. ..|++++.+.+..-
T Consensus 84 dd~iG~~~i~L~~l~~~~~~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e~~ 142 (167)
T 2cjs_A 84 DTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFELP 142 (167)
T ss_dssp CEEEEEEEEEGGGSCBCSSCCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEECC
T ss_pred CceEEEEEEEHHHhcccCcCCcccceeeeeeeEcCCCCCCceEccccceEEEEEEeecC
Confidence 4799999999999865431 13445432 22 13557777777543
No 84
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.43 E-value=1.3e-12 Score=141.87 Aligned_cols=117 Identities=21% Similarity=0.311 Sum_probs=98.7
Q ss_pred cceEEEEEEEEeEcCCCCCC--CCCCCcEEEEEEeC---CCeeEeecccCCC-CCCeeceEEEEEeccCCCCEEEEEEEE
Q 008334 442 IRGVLSVTVILAENLPASDL--MGKADPYVVLTMKK---SETRNKTRVVNDC-LNPIWNQTFDFVVEDGLHDMLIAEVWD 515 (569)
Q Consensus 442 ~~~~L~v~v~~a~~L~~~~~--~g~~dpyv~v~l~~---~~~~~~T~~~~~t-~nP~w~e~f~f~v~~~~~~~l~i~V~d 515 (569)
..+.|+|+|++|++|+..+. .+.+||||++.+.+ ...++||++++++ .||+|||+|+|.+..+....|.|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 56899999999999998873 68899999999964 2357899999987 999999999999987666789999999
Q ss_pred CCCCCC-ceeEEEEEecceeeecceEeEEEEcCCC-----CCeEEEEEEEEe
Q 008334 516 HDTFGK-DYMGRCILTLTRVILEGEYTDCFELDGT-----KSGKLKLHLKWM 561 (569)
Q Consensus 516 ~~~~~~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~-----~~G~i~l~~~~~ 561 (569)
++..++ ++||++.|+|.++..+ .+|++|.+. ..+.|.|++++.
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~G---~r~v~L~d~~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQG---YRHVHLLSKNGDQHPSATLFVKISIQ 623 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCCE---EEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred cCCCCCCceeEEEEEEHHHcCCC---cEEEeCCCCCcCCCCceEEEEEEEEE
Confidence 998865 7999999999998653 468888643 257888888775
No 85
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.40 E-value=2e-14 Score=152.09 Aligned_cols=125 Identities=18% Similarity=0.288 Sum_probs=22.8
Q ss_pred CccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCCCCeEEeeecCCC---CCCeeccEEEEEEecCCCcEEEEEEEEC
Q 008334 255 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINND---LNPIWNEHFEFIVEDESTQHLVVRIYDD 331 (569)
Q Consensus 255 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t---~nP~wne~f~f~v~~~~~~~L~i~v~d~ 331 (569)
+..|.|+|+|++|++|+++| ||||+++++ +....||+++++| .||+|||+|.|.+... ...|.++|||+
T Consensus 8 r~~~~L~V~VieAk~L~~~d-----dpYv~v~l~--~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~-~~~L~v~V~d~ 79 (483)
T 3bxj_A 8 RVDNVLKLWIIEARELPPKK-----RYYCELCLD--DMLYARTTSKPRSASGDTVFWGEHFEFNNLPA-VRALRLHLYRD 79 (483)
T ss_dssp EEEECC----------------------------------------------------CCEECC----------------
T ss_pred eeccEEEEEEEEcCCcCCCC-----CCeEEEEEC--CeEEeeeeEEeCCCCCCCCccccEEEEecCCC-ccEEEEEEEec
Confidence 56799999999999999876 999999997 2346789999998 9999999999986543 46899999994
Q ss_pred -C---CCCCCcceEEEEEEccccCCCceeEEEEEcccccccc-------------------CCCcceeEEEEEEEEEec
Q 008334 332 -E---GIQSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQ-------------------RDTKYRGQVHLELLYCPF 387 (569)
Q Consensus 332 -~---~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~~~-------------------~~~~~~G~l~l~l~~~p~ 387 (569)
+ ..++|++||++.+++.++..+...+.|++|....... +.....|.|++.+.|.+.
T Consensus 80 ~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~~~ 158 (483)
T 3bxj_A 80 SDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQTM 158 (483)
T ss_dssp ---------------------------CCEECC--------------------------------------CEEEEEEC
T ss_pred CCccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEeeee
Confidence 4 3578999999999999998888889999995432100 112356999999999863
No 86
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.37 E-value=4.8e-14 Score=149.24 Aligned_cols=120 Identities=15% Similarity=0.227 Sum_probs=24.9
Q ss_pred ccceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCCCeeEeecccCCC---CCCeeceEEEEEeccCCCCEEEEEEEEC-
Q 008334 441 IIRGVLSVTVILAENLPASDLMGKADPYVVLTMKKSETRNKTRVVNDC---LNPIWNQTFDFVVEDGLHDMLIAEVWDH- 516 (569)
Q Consensus 441 ~~~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~~~~~~T~~~~~t---~nP~w~e~f~f~v~~~~~~~l~i~V~d~- 516 (569)
...+.|+|+|++|++|+.++ ||||++++++ ....||+++++| +||+|||+|+|.+... ...|.|+|||+
T Consensus 8 r~~~~L~V~VieAk~L~~~d-----dpYv~v~l~~-~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~-~~~L~v~V~d~~ 80 (483)
T 3bxj_A 8 RVDNVLKLWIIEARELPPKK-----RYYCELCLDD-MLYARTTSKPRSASGDTVFWGEHFEFNNLPA-VRALRLHLYRDS 80 (483)
T ss_dssp EEEECC---------------------------------------------------CCEECC-----------------
T ss_pred eeccEEEEEEEEcCCcCCCC-----CCeEEEEECC-eEEeeeeEEeCCCCCCCCccccEEEEecCCC-ccEEEEEEEecC
Confidence 34688999999999999876 9999999975 346799999999 9999999999987533 57899999995
Q ss_pred CC---CC-CceeEEEEEecceeeecceEeEEEEcCCC---------------------------CCeEEEEEEEEeecCC
Q 008334 517 DT---FG-KDYMGRCILTLTRVILEGEYTDCFELDGT---------------------------KSGKLKLHLKWMPQPI 565 (569)
Q Consensus 517 ~~---~~-~d~lG~~~i~l~~l~~~~~~~~w~~L~~~---------------------------~~G~i~l~~~~~p~~~ 565 (569)
+. .+ +++||++.|+++++..+...++||+|.+. ..|.|++++.|.+...
T Consensus 81 d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~~~~v 160 (483)
T 3bxj_A 81 DKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQTMSI 160 (483)
T ss_dssp --------------------------CCEECC--------------------------------------CEEEEEECCB
T ss_pred CccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEeeeeee
Confidence 42 33 47999999999999877777999999431 2589999999998875
Q ss_pred CC
Q 008334 566 YR 567 (569)
Q Consensus 566 ~~ 567 (569)
.+
T Consensus 161 lP 162 (483)
T 3bxj_A 161 LP 162 (483)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 87
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.24 E-value=1.3e-11 Score=136.67 Aligned_cols=108 Identities=34% Similarity=0.544 Sum_probs=94.2
Q ss_pred cEEEEEEEEEeeccccCCCCCCCCcEEEEEEecC--CCCeEEeeecCCCCCCeeccEEEEEEecC-CCcEEEEEEEECCC
Q 008334 257 VGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPL--PEKTKKSKTINNDLNPIWNEHFEFIVEDE-STQHLVVRIYDDEG 333 (569)
Q Consensus 257 ~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~--~~~~~kT~~~~~t~nP~wne~f~f~v~~~-~~~~L~i~v~d~~~ 333 (569)
.+.|.|+|++|++|.++|..|.+||||++++.+. ...+++|+++++++||+|||+|.|.+... ....|.++|||+|.
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~ 250 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 250 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCS
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeeccc
Confidence 5789999999999999999999999999999643 34678999999999999999999998754 34579999999999
Q ss_pred CCCCcceEEEEEEccccCCCceeEEEEEcccc
Q 008334 334 IQSSELIGCAQVRLCELEPGKVKDVWLKLVKD 365 (569)
Q Consensus 334 ~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~~ 365 (569)
.++|++||++.+++.++.... .+.|+.+...
T Consensus 251 ~~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls~ 281 (674)
T 3pfq_A 251 TSRNDFMGSLSFGISELQKAG-VDGWFKLLSQ 281 (674)
T ss_dssp SSCCEECCBCCCBTTHHHHCC-EEEEEECBCT
T ss_pred ccccccccccccchhhhccCC-cccceeeccc
Confidence 999999999999999987654 4889998643
No 88
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.18 E-value=8.4e-11 Score=130.07 Aligned_cols=106 Identities=36% Similarity=0.593 Sum_probs=91.1
Q ss_pred ceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeC---CCeeEeecccCCCCCCeeceEEEEEeccC-CCCEEEEEEEECCC
Q 008334 443 RGVLSVTVILAENLPASDLMGKADPYVVLTMKK---SETRNKTRVVNDCLNPIWNQTFDFVVEDG-LHDMLIAEVWDHDT 518 (569)
Q Consensus 443 ~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~---~~~~~~T~~~~~t~nP~w~e~f~f~v~~~-~~~~l~i~V~d~~~ 518 (569)
.+.|.|++.+|++|+..+..|.+||||++++.. ...+++|+++++++||.|||+|.|.+... ....|.|+|||++.
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~ 250 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 250 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCS
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeeccc
Confidence 478999999999999999999999999999942 23578999999999999999999998743 34569999999999
Q ss_pred CCC-ceeEEEEEecceeeecceEeEEEEcCCC
Q 008334 519 FGK-DYMGRCILTLTRVILEGEYTDCFELDGT 549 (569)
Q Consensus 519 ~~~-d~lG~~~i~l~~l~~~~~~~~w~~L~~~ 549 (569)
.++ ++||.+.++++++...+ ..+|+.|.+.
T Consensus 251 ~~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls~ 281 (674)
T 3pfq_A 251 TSRNDFMGSLSFGISELQKAG-VDGWFKLLSQ 281 (674)
T ss_dssp SSCCEECCBCCCBTTHHHHCC-EEEEEECBCT
T ss_pred ccccccccccccchhhhccCC-cccceeeccc
Confidence 876 79999999999987654 4899998653
No 89
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.10 E-value=6.3e-10 Score=122.96 Aligned_cols=116 Identities=23% Similarity=0.362 Sum_probs=89.6
Q ss_pred cEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCC--C--CeEEeeecCC-CCCCeeccE-EEEE-EecCCCcEEEEEEE
Q 008334 257 VGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLP--E--KTKKSKTINN-DLNPIWNEH-FEFI-VEDESTQHLVVRIY 329 (569)
Q Consensus 257 ~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~--~--~~~kT~~~~~-t~nP~wne~-f~f~-v~~~~~~~L~i~v~ 329 (569)
.+.|.|+|++|++|+.+ .+||||++.+...+ . ++++|+++++ +.||+|||+ |.|. +..+....|+|+||
T Consensus 649 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~ 724 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVS 724 (816)
T ss_dssp CEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEE
T ss_pred ceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEE
Confidence 48899999999999853 58999999997321 2 4678999875 699999998 9998 76565568999999
Q ss_pred ECCCCCCCcceEEEEEEccccCCCceeEEEEEccccccccCCCcceeEEEEEEEEEe
Q 008334 330 DDEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQRDTKYRGQVHLELLYCP 386 (569)
Q Consensus 330 d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~G~l~l~l~~~p 386 (569)
|++ +++||++.++|..|..|. .+++|.... ...-..+.|.+.+.+.-
T Consensus 725 D~d----ddfiG~~~ipL~~L~~Gy---R~vpL~~~~---g~~~~~atLfv~i~~~~ 771 (816)
T 3qr0_A 725 EEN----GKFIGHRVMPLDGIKPGY---RHVPLRNES---NRPLGLASVFAHIVAKD 771 (816)
T ss_dssp ETT----SCEEEEEEEESTTCCCEE---EEEEEECTT---SCEEEEEEEEEEEEEEE
T ss_pred ecC----CCeeeEEEEEHHHcCCcc---eEEEEeCCC---CCCCCceEEEEEEEEEe
Confidence 985 789999999999998764 467775421 12223478888877653
No 90
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.10 E-value=4.3e-10 Score=124.93 Aligned_cols=116 Identities=16% Similarity=0.321 Sum_probs=90.3
Q ss_pred cEEEEEEEEEeeccccCCCCCCCCcEEEEEEecC--C-CCeEEeeecCC-CCCCeecc-EEEEE-EecCCCcEEEEEEEE
Q 008334 257 VGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPL--P-EKTKKSKTINN-DLNPIWNE-HFEFI-VEDESTQHLVVRIYD 330 (569)
Q Consensus 257 ~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~--~-~~~~kT~~~~~-t~nP~wne-~f~f~-v~~~~~~~L~i~v~d 330 (569)
...|.|+|++|++|+.. .+||||+|.+... . .++++|+++.+ +.||+||| +|.|. +..+....|+|+|||
T Consensus 724 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D 799 (885)
T 3ohm_B 724 ANALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFE 799 (885)
T ss_dssp CEEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred ceEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEc
Confidence 35899999999999853 5899999999732 1 23578999865 69999999 69998 765556689999999
Q ss_pred CCCCCCCcceEEEEEEccccCCCceeEEEEEccccccccCCCcceeEEEEEEEEEe
Q 008334 331 DEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQRDTKYRGQVHLELLYCP 386 (569)
Q Consensus 331 ~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~G~l~l~l~~~p 386 (569)
++ |++||++.++|..|..|. .+++|.... ...-..|.|.+.+.+..
T Consensus 800 ~d----ddfiG~~~lpL~~L~~Gy---R~vpL~~~~---g~~l~~atLfv~i~~~~ 845 (885)
T 3ohm_B 800 EG----GKFVGHRILPVSAIRSGY---HYVCLRNEA---NQPLCLPALLIYTEASD 845 (885)
T ss_dssp TT----TEEEEEEEEETTTCCCEE---EEEEEECTT---SCEEEEEEEEEEEEEEE
T ss_pred CC----ccEEeeEEEEHHHcCCCc---eEEEecCCC---CCccCceEEEEEEEEEe
Confidence 87 789999999999998764 457775321 12235789999988874
No 91
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.09 E-value=7.3e-10 Score=123.18 Aligned_cols=115 Identities=19% Similarity=0.310 Sum_probs=88.6
Q ss_pred ccEEEEEEEEEeeccccCCCCCCCCcEEEEEEecC---CCCeEEee-ecC-CCCCCeecc-EEEE-EEecCCCcEEEEEE
Q 008334 256 PVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPL---PEKTKKSK-TIN-NDLNPIWNE-HFEF-IVEDESTQHLVVRI 328 (569)
Q Consensus 256 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~---~~~~~kT~-~~~-~t~nP~wne-~f~f-~v~~~~~~~L~i~v 328 (569)
..|.|.|+|++|++|+. +.+||||++.+... ..+++||+ +++ ++.||+||| +|.| .+..+....|+|+|
T Consensus 676 ~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V 751 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAV 751 (799)
T ss_dssp TCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEE
T ss_pred eeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEE
Confidence 46899999999999984 46899999999631 12468999 775 569999999 6999 78666666899999
Q ss_pred EECCCCCCCcceEEEEEEccccCCCceeEEEEEccccccccCCCcceeEEEEEEEE
Q 008334 329 YDDEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQRDTKYRGQVHLELLY 384 (569)
Q Consensus 329 ~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~G~l~l~l~~ 384 (569)
||++ +++||.+.+++..|.+|. .|++|.... ...-..+.|.+.+.+
T Consensus 752 ~D~d----~d~iG~~~ipl~~L~~G~---r~v~L~~~~---g~~~~~~~Lfv~i~~ 797 (799)
T 2zkm_X 752 MEEG----NKFLGHRIIPINALNSGY---HHLCLHSES---NMPLTMPALFIFLEM 797 (799)
T ss_dssp EETT----TEEEEEEEEEGGGBCCEE---EEEEEECTT---CCEEEEEEEEEEEEE
T ss_pred EEeC----CCccceEeeehhhcCCCc---EEEeccCCC---CCCCCceEEEEEEEE
Confidence 9986 789999999999998753 577775321 111235777777765
No 92
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.06 E-value=1e-09 Score=121.94 Aligned_cols=110 Identities=20% Similarity=0.312 Sum_probs=87.4
Q ss_pred cceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCC----CeeEeec-ccCC-CCCCeece-EEEE-EeccCCCCEEEEEE
Q 008334 442 IRGVLSVTVILAENLPASDLMGKADPYVVLTMKKS----ETRNKTR-VVND-CLNPIWNQ-TFDF-VVEDGLHDMLIAEV 513 (569)
Q Consensus 442 ~~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~----~~~~~T~-~~~~-t~nP~w~e-~f~f-~v~~~~~~~l~i~V 513 (569)
..+.|.|+|++|++|+. +.+||||+|.+.+. ..+++|+ ++++ +.||+||| +|+| .+..+.-+.|.|+|
T Consensus 676 ~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V 751 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAV 751 (799)
T ss_dssp TCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEE
T ss_pred eeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEE
Confidence 46799999999999985 46899999999541 1367899 7764 69999999 6999 88766667899999
Q ss_pred EECCCCCCceeEEEEEecceeeecceEeEEEEcCCC-----CCeEEEEEEEEe
Q 008334 514 WDHDTFGKDYMGRCILTLTRVILEGEYTDCFELDGT-----KSGKLKLHLKWM 561 (569)
Q Consensus 514 ~d~~~~~~d~lG~~~i~l~~l~~~~~~~~w~~L~~~-----~~G~i~l~~~~~ 561 (569)
||++ +++||++.|+++++..+ .+|++|.+. ..+.|.|++++.
T Consensus 752 ~D~d---~d~iG~~~ipl~~L~~G---~r~v~L~~~~g~~~~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 752 MEEG---NKFLGHRIIPINALNSG---YHHLCLHSESNMPLTMPALFIFLEMK 798 (799)
T ss_dssp EETT---TEEEEEEEEEGGGBCCE---EEEEEEECTTCCEEEEEEEEEEEEEE
T ss_pred EEeC---CCccceEeeehhhcCCC---cEEEeccCCCCCCCCceEEEEEEEEE
Confidence 9987 68999999999998543 457777543 246777777764
No 93
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.05 E-value=1e-09 Score=121.86 Aligned_cols=110 Identities=22% Similarity=0.298 Sum_probs=88.5
Q ss_pred ceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCC--C--eeEeecccCC-CCCCeece-EEEEE-eccCCCCEEEEEEEE
Q 008334 443 RGVLSVTVILAENLPASDLMGKADPYVVLTMKKS--E--TRNKTRVVND-CLNPIWNQ-TFDFV-VEDGLHDMLIAEVWD 515 (569)
Q Consensus 443 ~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~--~--~~~~T~~~~~-t~nP~w~e-~f~f~-v~~~~~~~l~i~V~d 515 (569)
...|.|+|++|++|+.. .+||||+|.+.+. . .+++|+++++ +.||+||| +|.|. |..+....|.|+|||
T Consensus 724 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D 799 (885)
T 3ohm_B 724 ANALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFE 799 (885)
T ss_dssp CEEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred ceEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEc
Confidence 45899999999999853 5899999999751 1 3579999876 69999999 69998 776666789999999
Q ss_pred CCCCCCceeEEEEEecceeeecceEeEEEEcCCC-----CCeEEEEEEEEee
Q 008334 516 HDTFGKDYMGRCILTLTRVILEGEYTDCFELDGT-----KSGKLKLHLKWMP 562 (569)
Q Consensus 516 ~~~~~~d~lG~~~i~l~~l~~~~~~~~w~~L~~~-----~~G~i~l~~~~~p 562 (569)
++ +|+||++.++|+.+..+ .++++|.+. ..|.|.+.+.+..
T Consensus 800 ~d---ddfiG~~~lpL~~L~~G---yR~vpL~~~~g~~l~~atLfv~i~~~~ 845 (885)
T 3ohm_B 800 EG---GKFVGHRILPVSAIRSG---YHYVCLRNEANQPLCLPALLIYTEASD 845 (885)
T ss_dssp TT---TEEEEEEEEETTTCCCE---EEEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred CC---ccEEeeEEEEHHHcCCC---ceEEEecCCCCCccCceEEEEEEEEEe
Confidence 87 68999999999998544 456777543 2578888888774
No 94
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.03 E-value=1.9e-09 Score=119.19 Aligned_cols=109 Identities=17% Similarity=0.272 Sum_probs=87.7
Q ss_pred ceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCC---C--eeEeecccCC-CCCCeeceE-EEEE-eccCCCCEEEEEEE
Q 008334 443 RGVLSVTVILAENLPASDLMGKADPYVVLTMKKS---E--TRNKTRVVND-CLNPIWNQT-FDFV-VEDGLHDMLIAEVW 514 (569)
Q Consensus 443 ~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~---~--~~~~T~~~~~-t~nP~w~e~-f~f~-v~~~~~~~l~i~V~ 514 (569)
.+.|.|+|++|++|+.. .+||||+|.+.+. . .+++|+++++ +.||+|||+ |+|. +..+.-..|.|+||
T Consensus 649 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~ 724 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVS 724 (816)
T ss_dssp CEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEE
T ss_pred ceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEE
Confidence 47899999999999853 5899999999741 1 4679999876 699999998 9998 87666678999999
Q ss_pred ECCCCCCceeEEEEEecceeeecceEeEEEEcCCCC-----CeEEEEEEEEe
Q 008334 515 DHDTFGKDYMGRCILTLTRVILEGEYTDCFELDGTK-----SGKLKLHLKWM 561 (569)
Q Consensus 515 d~~~~~~d~lG~~~i~l~~l~~~~~~~~w~~L~~~~-----~G~i~l~~~~~ 561 (569)
|++ +|+||++.++|+++..+ .++++|.+.. .+.|.+.+...
T Consensus 725 D~d---ddfiG~~~ipL~~L~~G---yR~vpL~~~~g~~~~~atLfv~i~~~ 770 (816)
T 3qr0_A 725 EEN---GKFIGHRVMPLDGIKPG---YRHVPLRNESNRPLGLASVFAHIVAK 770 (816)
T ss_dssp ETT---SCEEEEEEEESTTCCCE---EEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred ecC---CCeeeEEEEEHHHcCCc---ceEEEEeCCCCCCCCceEEEEEEEEE
Confidence 985 58999999999998654 4567775432 46777777665
No 95
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.03 E-value=6.7e-09 Score=85.61 Aligned_cols=113 Identities=14% Similarity=0.225 Sum_probs=86.5
Q ss_pred cceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCCCe--eEee-cccCCCCCCeeceEEEEEeccCCCCEEEEEEEECCC
Q 008334 442 IRGVLSVTVILAENLPASDLMGKADPYVVLTMKKSET--RNKT-RVVNDCLNPIWNQTFDFVVEDGLHDMLIAEVWDHDT 518 (569)
Q Consensus 442 ~~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~~~--~~~T-~~~~~t~nP~w~e~f~f~v~~~~~~~l~i~V~d~~~ 518 (569)
....|+|...++.--+..+.....||||.+.+..... ..+| ...++|..|.||++|.-.+.+ ...|+|.|++...
T Consensus 4 m~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~ 81 (126)
T 1yrk_A 4 MAPFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAAE 81 (126)
T ss_dssp CCCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT--TCEEEEEEEEETT
T ss_pred cCccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC--CEEEEEEEEcCCC
Confidence 3477888887766433322234689999999863111 2244 666789999999999999985 5679999997654
Q ss_pred CCCceeEEEEEecceeee-----cceEeEEEEcCCCCCeEEEEEEEEe
Q 008334 519 FGKDYMGRCILTLTRVIL-----EGEYTDCFELDGTKSGKLKLHLKWM 561 (569)
Q Consensus 519 ~~~d~lG~~~i~l~~l~~-----~~~~~~w~~L~~~~~G~i~l~~~~~ 561 (569)
++++.|+|+++++.. ++..+-|+.|+. .|+|++.++|.
T Consensus 82 ---~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP--~Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 ---EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQP--QAKVLMSVQYF 124 (126)
T ss_dssp ---EEEEEEEEEHHHHHHHHHTTTTEEEEEEECBS--SCEEEEEEEEE
T ss_pred ---CeeeEEEEEHHHHHhhhccCCCceEEEEeccc--CcEEEEEEEEe
Confidence 899999999999984 346689999988 79999999985
No 96
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.95 E-value=1.5e-08 Score=83.58 Aligned_cols=113 Identities=12% Similarity=0.224 Sum_probs=83.7
Q ss_pred cEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCC-CCeEEe-eecCCCCCCeeccEEEEEEecCCCcEEEEEEEECCCC
Q 008334 257 VGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLP-EKTKKS-KTINNDLNPIWNEHFEFIVEDESTQHLVVRIYDDEGI 334 (569)
Q Consensus 257 ~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~-~~~~kT-~~~~~t~nP~wne~f~f~v~~~~~~~L~i~v~d~~~~ 334 (569)
.+-|+|.+.++.--.-.......||||.+.+.... ....+| .+.+.|..|+|||+|.-.+++ ...|.+.|++...
T Consensus 5 ~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~- 81 (126)
T 1yrk_A 5 APFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAAE- 81 (126)
T ss_dssp CCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT--TCEEEEEEEEETT-
T ss_pred CccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC--CEEEEEEEEcCCC-
Confidence 35678887665532211222357999999997211 112355 667889999999999888864 5689999997554
Q ss_pred CCCcceEEEEEEccccC-----CCceeEEEEEccccccccCCCcceeEEEEEEEEE
Q 008334 335 QSSELIGCAQVRLCELE-----PGKVKDVWLKLVKDLDVQRDTKYRGQVHLELLYC 385 (569)
Q Consensus 335 ~~d~~iG~~~i~l~~l~-----~~~~~~~~~~L~~~~~~~~~~~~~G~l~l~l~~~ 385 (569)
++++.|.+++.+|. .+...+.|+.| ++.|.|++.+.|+
T Consensus 82 ---~fvAn~tV~~edL~~~c~~~~g~~e~WvdL----------eP~Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 ---EPVSEVTVGVSVLAERCKKNNGKAEFWLDL----------QPQAKVLMSVQYF 124 (126)
T ss_dssp ---EEEEEEEEEHHHHHHHHHTTTTEEEEEEEC----------BSSCEEEEEEEEE
T ss_pred ---CeeeEEEEEHHHHHhhhccCCCceEEEEec----------ccCcEEEEEEEEe
Confidence 89999999999996 45677999998 4589999999986
No 97
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.93 E-value=9.5e-09 Score=85.83 Aligned_cols=114 Identities=14% Similarity=0.248 Sum_probs=87.3
Q ss_pred cceEEEEEEEEeEcCCCCC-CCCCCCcEEEEEEeCCC--eeEee-cccCCCCCCeeceEEEEEeccCCCCEEEEEEEECC
Q 008334 442 IRGVLSVTVILAENLPASD-LMGKADPYVVLTMKKSE--TRNKT-RVVNDCLNPIWNQTFDFVVEDGLHDMLIAEVWDHD 517 (569)
Q Consensus 442 ~~~~L~v~v~~a~~L~~~~-~~g~~dpyv~v~l~~~~--~~~~T-~~~~~t~nP~w~e~f~f~v~~~~~~~l~i~V~d~~ 517 (569)
..+.|+|.+.+..--+... .....||||.|.+.... ...+| ...++|..|.||++|.-.+.+ ...|+|.|++..
T Consensus 8 m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a 85 (138)
T 2enj_A 8 MSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK--GRVMQIIVKGKN 85 (138)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS--SCEEEEEEECSS
T ss_pred cCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC--CeEEEEEEEcCC
Confidence 4577888887776544332 13358999999986321 12555 555779999999999998885 567999999655
Q ss_pred CCCCceeEEEEEecceeeec-----ceEeEEEEcCCCCCeEEEEEEEEee
Q 008334 518 TFGKDYMGRCILTLTRVILE-----GEYTDCFELDGTKSGKLKLHLKWMP 562 (569)
Q Consensus 518 ~~~~d~lG~~~i~l~~l~~~-----~~~~~w~~L~~~~~G~i~l~~~~~p 562 (569)
. ++++.|+|++++|..+ +..+-|+.|+. .|+|++.++|.-
T Consensus 86 ~---~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP--~Gkl~v~i~~~~ 130 (138)
T 2enj_A 86 V---DLISETTVELYSLAERCRKNNGKTEIWLELKP--QGRMLMNARYFL 130 (138)
T ss_dssp C---SCCEEEEEESHHHHHHHHHTTTCEEEEEECBS--SCEEEEEEEECC
T ss_pred C---CeeeEEEEEHHHHHhhhccCCCceEEEEeccc--CcEEEEEEEEEE
Confidence 4 8999999999999843 45689999988 799999999864
No 98
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.84 E-value=2.3e-08 Score=83.55 Aligned_cols=113 Identities=17% Similarity=0.318 Sum_probs=83.9
Q ss_pred cEEEEEEEEEeeccccCC-CCCCCCcEEEEEEecCC-CCeEEe-eecCCCCCCeeccEEEEEEecCCCcEEEEEEEECCC
Q 008334 257 VGTLEVKLVQAKGLTNKD-LIGKSDPYAVLFVRPLP-EKTKKS-KTINNDLNPIWNEHFEFIVEDESTQHLVVRIYDDEG 333 (569)
Q Consensus 257 ~g~L~V~v~~a~~L~~~d-~~g~~dpyv~v~~~~~~-~~~~kT-~~~~~t~nP~wne~f~f~v~~~~~~~L~i~v~d~~~ 333 (569)
.+-|+|.+.++.--+-.. .....||||.+.+.... ....+| .+.+.|..|+|||+|.-.++ ....|.|.|++...
T Consensus 9 ~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~--~Gr~l~i~Vfh~a~ 86 (138)
T 2enj_A 9 SPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHIN--KGRVMQIIVKGKNV 86 (138)
T ss_dssp CCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCC--SSCEEEEEEECSSC
T ss_pred CcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEE--CCeEEEEEEEcCCC
Confidence 467888887665433221 12357999999997310 122556 55677999999999988776 45689999996443
Q ss_pred CCCCcceEEEEEEccccC-----CCceeEEEEEccccccccCCCcceeEEEEEEEEE
Q 008334 334 IQSSELIGCAQVRLCELE-----PGKVKDVWLKLVKDLDVQRDTKYRGQVHLELLYC 385 (569)
Q Consensus 334 ~~~d~~iG~~~i~l~~l~-----~~~~~~~~~~L~~~~~~~~~~~~~G~l~l~l~~~ 385 (569)
++++.|.+++.+|. .+...+.|+.| ++.|.|++.+.|+
T Consensus 87 ----~fVAn~tV~~edL~~~ck~~~g~~e~WvdL----------eP~Gkl~v~i~~~ 129 (138)
T 2enj_A 87 ----DLISETTVELYSLAERCRKNNGKTEIWLEL----------KPQGRMLMNARYF 129 (138)
T ss_dssp ----SCCEEEEEESHHHHHHHHHTTTCEEEEEEC----------BSSCEEEEEEEEC
T ss_pred ----CeeeEEEEEHHHHHhhhccCCCceEEEEec----------ccCcEEEEEEEEE
Confidence 89999999999996 45677999998 4589999999996
No 99
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=93.26 E-value=1.5 Score=39.91 Aligned_cols=55 Identities=22% Similarity=0.256 Sum_probs=39.2
Q ss_pred CeEEeeecCCCCCCeeccEEEEEEecC--CCcEEEEEEEECCCCC----CCcceEEEEEEc
Q 008334 293 KTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRIYDDEGIQ----SSELIGCAQVRL 347 (569)
Q Consensus 293 ~~~kT~~~~~t~nP~wne~f~f~v~~~--~~~~L~i~v~d~~~~~----~d~~iG~~~i~l 347 (569)
..++|.+...+.+|.|+|++.+.+... ....|.|.+++..... ....+|.+.+||
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL 137 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKL 137 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEES
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEc
Confidence 357888888899999999999988744 4568999998865321 123456555554
No 100
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=91.11 E-value=2 Score=36.94 Aligned_cols=126 Identities=11% Similarity=0.121 Sum_probs=85.0
Q ss_pred CccEEEEEEEEEeeccccC-CCCCCCCcEEEEEEecCCCCeEEeeecCCCCCCeeccEEEEEEecC-------CCcEEEE
Q 008334 255 KPVGTLEVKLVQAKGLTNK-DLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDE-------STQHLVV 326 (569)
Q Consensus 255 ~~~g~L~V~v~~a~~L~~~-d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~-------~~~~L~i 326 (569)
+..+.+.|+|.++.--+.. ...+..+|...+.+.-..-+.+.|.+.. +.+|.+|-+-.|.+... .+..+.+
T Consensus 15 ~gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~l 93 (156)
T 2yrb_A 15 RGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITL 93 (156)
T ss_dssp SSCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEE
T ss_pred CCCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEE
Confidence 4568899999887732211 0123457887777765556777787665 88999999888887532 2447889
Q ss_pred EEEECCCCCCCcceEEEEEEccccCCCce-eEEEEEccccccccCCC-cceeEEEEEEEEEe
Q 008334 327 RIYDDEGIQSSELIGCAQVRLCELEPGKV-KDVWLKLVKDLDVQRDT-KYRGQVHLELLYCP 386 (569)
Q Consensus 327 ~v~d~~~~~~d~~iG~~~i~l~~l~~~~~-~~~~~~L~~~~~~~~~~-~~~G~l~l~l~~~p 386 (569)
+++.... ..-+.+|.+.+++.++...+. .....+|... .++ ..-|.|.+.+++..
T Consensus 94 ELhqa~g-~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~----~g~~~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 94 EVHQAYS-TEYETIAACQLKFHEILEKSGRIFCTASLIGT----KGDIPNFGTVEYWFRLRV 150 (156)
T ss_dssp EEEEECS-SCEEEEEEEEECCSHHHHCCSCEEEEEEECBS----SSCCTTSEEEEEEEEEEE
T ss_pred EEEEeeC-CCceEEEEEEEEhHHhhCcCCceEEEEEEEcC----CCCcceEEEEEEEEEEec
Confidence 9988753 345789999999999864332 3344455421 122 47899999998763
No 101
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=87.16 E-value=3.2 Score=46.71 Aligned_cols=89 Identities=16% Similarity=0.176 Sum_probs=62.0
Q ss_pred ceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCCCe----eEeecccCCCCCCeeceEEEEEec---cCCCCEEEEEEEE
Q 008334 443 RGVLSVTVILAENLPASDLMGKADPYVVLTMKKSET----RNKTRVVNDCLNPIWNQTFDFVVE---DGLHDMLIAEVWD 515 (569)
Q Consensus 443 ~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~~~----~~~T~~~~~t~nP~w~e~f~f~v~---~~~~~~l~i~V~d 515 (569)
...+.|+|..+.+++.. ...+-||.+.+-++.+ ...|..+....+|.|||-++|++. -|..+.|.|+||+
T Consensus 216 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~ 292 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYA 292 (940)
T ss_dssp CSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEE
T ss_pred CCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEE
Confidence 46899999999998754 3457788877643322 234554445778999999999875 3577899999999
Q ss_pred CCCC--C----------C-ceeEEEEEeccee
Q 008334 516 HDTF--G----------K-DYMGRCILTLTRV 534 (569)
Q Consensus 516 ~~~~--~----------~-d~lG~~~i~l~~l 534 (569)
.... + . ..||.+.+++-+-
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 324 (940)
T 2wxf_A 293 VVEKAKKARSTKKKSKKADCPIAWANLMLFDY 324 (940)
T ss_dssp EC----------------CEEEEEEEEESBCT
T ss_pred ecCCccCccccccccccccceEEEEeeeEECC
Confidence 5321 1 1 3899999999763
No 102
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=85.53 E-value=14 Score=33.52 Aligned_cols=56 Identities=13% Similarity=0.181 Sum_probs=42.9
Q ss_pred eeEeecccCCCCCCeeceEEEEEeccC--CCCEEEEEEEECCCCC-----CceeEEEEEecce
Q 008334 478 TRNKTRVVNDCLNPIWNQTFDFVVEDG--LHDMLIAEVWDHDTFG-----KDYMGRCILTLTR 533 (569)
Q Consensus 478 ~~~~T~~~~~t~nP~w~e~f~f~v~~~--~~~~l~i~V~d~~~~~-----~d~lG~~~i~l~~ 533 (569)
..++|.+.+.+.+|.|+|++.+.+... ....|.+++++..... ...+|.+-+||-+
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~ 139 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMR 139 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBC
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEccc
Confidence 357888888899999999999998733 4568999998765321 1378999999864
No 103
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=84.48 E-value=5.2 Score=34.31 Aligned_cols=119 Identities=16% Similarity=0.194 Sum_probs=76.0
Q ss_pred cceEEEEEEEEeEcCCCCC--CCCCCCcEEEEEEe-CCCeeEeecccCCCCCCeeceEEEEEecc-------CCCCEEEE
Q 008334 442 IRGVLSVTVILAENLPASD--LMGKADPYVVLTMK-KSETRNKTRVVNDCLNPIWNQTFDFVVED-------GLHDMLIA 511 (569)
Q Consensus 442 ~~~~L~v~v~~a~~L~~~~--~~g~~dpyv~v~l~-~~~~~~~T~~~~~t~nP~w~e~f~f~v~~-------~~~~~l~i 511 (569)
..+.+.++|.++. +.+.. ..+..+|..-..+. -.-+.+.|.++. ..+|.+|-+-.|.|.. .....+.+
T Consensus 16 gEnlfEihi~~~~-~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~l 93 (156)
T 2yrb_A 16 GENLFEIHINKVT-FSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITL 93 (156)
T ss_dssp SCEEEEEEEEEEC-CCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEE
T ss_pred CCcEEEEEEeEEE-EcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEE
Confidence 4578899988886 22110 11233554444432 123456677765 7899999998888852 12346888
Q ss_pred EEEECCCCCCceeEEEEEecceeeecc-eEeEEEEcCCC-----CCeEEEEEEEEee
Q 008334 512 EVWDHDTFGKDYMGRCILTLTRVILEG-EYTDCFELDGT-----KSGKLKLHLKWMP 562 (569)
Q Consensus 512 ~V~d~~~~~~d~lG~~~i~l~~l~~~~-~~~~w~~L~~~-----~~G~i~l~~~~~p 562 (569)
++.......-..||++.|++.+++... ......+|.+. .-|.|...+.++.
T Consensus 94 ELhqa~g~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g~~~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 94 EVHQAYSTEYETIAACQLKFHEILEKSGRIFCTASLIGTKGDIPNFGTVEYWFRLRV 150 (156)
T ss_dssp EEEEECSSCEEEEEEEEECCSHHHHCCSCEEEEEEECBSSSCCTTSEEEEEEEEEEE
T ss_pred EEEEeeCCCceEEEEEEEEhHHhhCcCCceEEEEEEEcCCCCcceEEEEEEEEEEec
Confidence 888764322258999999999998654 34555566543 4688888877753
No 104
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=82.44 E-value=6.9 Score=44.41 Aligned_cols=90 Identities=14% Similarity=0.151 Sum_probs=62.9
Q ss_pred ceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCCCe----eEeecccCCCCCCeeceEEEEEec---cCCCCEEEEEEEE
Q 008334 443 RGVLSVTVILAENLPASDLMGKADPYVVLTMKKSET----RNKTRVVNDCLNPIWNQTFDFVVE---DGLHDMLIAEVWD 515 (569)
Q Consensus 443 ~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~~~----~~~T~~~~~t~nP~w~e~f~f~v~---~~~~~~l~i~V~d 515 (569)
...++|+|..+.+++... ....+-||.+.+-++.+ ..+|+.+ ...+|.|||-.+|.+. -|..+.|.|+||+
T Consensus 354 ~~~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~~-~~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~ 431 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQRV-PCSNPRWNEWLNYDIYIPDLPRAARLCLSICS 431 (1091)
T ss_dssp CSEEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCCC-CTTSCEEEEEEEEEEEGGGCCTTCEEEEEECC
T ss_pred CCCEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceecccc-CCCCCCCCeeEEecCccccCChhcEEEEEEEE
Confidence 468999999999886433 23457788888754332 2344433 3467889999999875 3577899999998
Q ss_pred CCCC----CC-ceeEEEEEeccee
Q 008334 516 HDTF----GK-DYMGRCILTLTRV 534 (569)
Q Consensus 516 ~~~~----~~-d~lG~~~i~l~~l 534 (569)
.... .. ..||.++++|-+-
T Consensus 432 ~~~~~~~~~~~~~lg~~n~~lfd~ 455 (1091)
T 3hhm_A 432 VKGRKGAKEEHCPLAWGNINLFDY 455 (1091)
T ss_dssp CCCCC-------CCEEEEEESBCT
T ss_pred ecCccCcccccceeEEeeeeeEcc
Confidence 6542 12 3799999999864
No 105
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=80.25 E-value=7.6 Score=43.66 Aligned_cols=91 Identities=18% Similarity=0.257 Sum_probs=60.9
Q ss_pred cEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCCC---CeEEeeecCCCCCCeeccEEEEEEe--c-CCCcEEEEEEEE
Q 008334 257 VGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPE---KTKKSKTINNDLNPIWNEHFEFIVE--D-ESTQHLVVRIYD 330 (569)
Q Consensus 257 ~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~---~~~kT~~~~~t~nP~wne~f~f~v~--~-~~~~~L~i~v~d 330 (569)
...+.|+|.++.++... ...+-||.+.+-.++. ....|+.+....+|.|||...|.+. + +....|.|.||+
T Consensus 216 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~ 292 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYA 292 (940)
T ss_dssp CSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEE
T ss_pred CCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEE
Confidence 46789999999998743 3467788877742221 2334554555678999999888765 2 245689999999
Q ss_pred CCCC--C----------CCcceEEEEEEcccc
Q 008334 331 DEGI--Q----------SSELIGCAQVRLCEL 350 (569)
Q Consensus 331 ~~~~--~----------~d~~iG~~~i~l~~l 350 (569)
.... + .+..+|.+.+++-+-
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 324 (940)
T 2wxf_A 293 VVEKAKKARSTKKKSKKADCPIAWANLMLFDY 324 (940)
T ss_dssp EC----------------CEEEEEEEEESBCT
T ss_pred ecCCccCccccccccccccceEEEEeeeEECC
Confidence 6321 1 245899999998764
No 106
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=73.65 E-value=15 Score=41.45 Aligned_cols=91 Identities=12% Similarity=0.093 Sum_probs=58.6
Q ss_pred ceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCCCe---eEeecccCCCCCCeeceEEEEEec---cCCCCEEEEEEEEC
Q 008334 443 RGVLSVTVILAENLPASDLMGKADPYVVLTMKKSET---RNKTRVVNDCLNPIWNQTFDFVVE---DGLHDMLIAEVWDH 516 (569)
Q Consensus 443 ~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~~~---~~~T~~~~~t~nP~w~e~f~f~v~---~~~~~~l~i~V~d~ 516 (569)
...++|.|..+...... .+...+-||.+.+-++.+ ..+|..+.-+.+|.|||-++|.+. -|..+.|.|+||+.
T Consensus 217 ~~~f~i~i~~~~~~~~~-~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 295 (961)
T 1e7u_A 217 DRKFRVKIRGIDIPVLP-RTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCG 295 (961)
T ss_dssp CSEEEEEEEEEECSSCC-TTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred cCceEEEEeeccccccc-CCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEec
Confidence 35788888887642211 123457788876643222 234444445668999999999875 35778999999974
Q ss_pred CCC----------------CC-ceeEEEEEeccee
Q 008334 517 DTF----------------GK-DYMGRCILTLTRV 534 (569)
Q Consensus 517 ~~~----------------~~-d~lG~~~i~l~~l 534 (569)
... ++ ..||.++++|-+-
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~ 330 (961)
T 1e7u_A 296 AKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDH 330 (961)
T ss_dssp EC--------------------CEEEEEEEESBCT
T ss_pred ccCccccccccccccccccccceeEEEEeeeeecC
Confidence 321 12 3799999998764
No 107
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=69.25 E-value=28 Score=39.59 Aligned_cols=92 Identities=16% Similarity=0.212 Sum_probs=61.2
Q ss_pred cEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCCCC---eEEeeecCCCCCCeeccEEEEEEe--c-CCCcEEEEEEEE
Q 008334 257 VGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEK---TKKSKTINNDLNPIWNEHFEFIVE--D-ESTQHLVVRIYD 330 (569)
Q Consensus 257 ~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~---~~kT~~~~~t~nP~wne~f~f~v~--~-~~~~~L~i~v~d 330 (569)
...++|+|+++.++.... ....+-||.+.+-.++.. ..+|+.+ ...+|.|||...|.+. + +....|.|.||+
T Consensus 354 ~~~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~~-~~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~ 431 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQRV-PCSNPRWNEWLNYDIYIPDLPRAARLCLSICS 431 (1091)
T ss_dssp CSEEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCCC-CTTSCEEEEEEEEEEEGGGCCTTCEEEEEECC
T ss_pred CCCEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceecccc-CCCCCCCCeeEEecCccccCChhcEEEEEEEE
Confidence 357899999998886432 334678988888532222 2344433 3567889999888874 3 245689999998
Q ss_pred CCCC----CCCcceEEEEEEcccc
Q 008334 331 DEGI----QSSELIGCAQVRLCEL 350 (569)
Q Consensus 331 ~~~~----~~d~~iG~~~i~l~~l 350 (569)
.... .....+|.+.++|-+-
T Consensus 432 ~~~~~~~~~~~~~lg~~n~~lfd~ 455 (1091)
T 3hhm_A 432 VKGRKGAKEEHCPLAWGNINLFDY 455 (1091)
T ss_dssp CCCCC-------CCEEEEEESBCT
T ss_pred ecCccCcccccceeEEeeeeeEcc
Confidence 6542 1345799999999765
No 108
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=66.34 E-value=5.2 Score=45.59 Aligned_cols=89 Identities=10% Similarity=0.062 Sum_probs=59.6
Q ss_pred ceEEEEEEEEeEcCCCCCCCCCCCcEEEEEEeCCCe----eEeecccCCCCCCeeceEEEEEec---cCCCCEEEEEEEE
Q 008334 443 RGVLSVTVILAENLPASDLMGKADPYVVLTMKKSET----RNKTRVVNDCLNPIWNQTFDFVVE---DGLHDMLIAEVWD 515 (569)
Q Consensus 443 ~~~L~v~v~~a~~L~~~~~~g~~dpyv~v~l~~~~~----~~~T~~~~~t~nP~w~e~f~f~v~---~~~~~~l~i~V~d 515 (569)
...++|+|..+.++... ...+-||.+.+-++.+ ...|..+..+.+|.|||-++|.+. -|..+.|.|+||+
T Consensus 352 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~ 428 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYA 428 (1092)
T ss_dssp CSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCC
T ss_pred CCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEE
Confidence 46899999999988754 3456777765532222 234544444678999999999875 3467899999998
Q ss_pred CCCC----------------------CC-ceeEEEEEeccee
Q 008334 516 HDTF----------------------GK-DYMGRCILTLTRV 534 (569)
Q Consensus 516 ~~~~----------------------~~-d~lG~~~i~l~~l 534 (569)
.... +. ..||.++++|-+-
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 470 (1092)
T 2y3a_A 429 VLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDF 470 (1092)
T ss_dssp C------------------------------CCEEEEESBCT
T ss_pred ecCccccccccccccccccccccccccccceeEEEeeeeECC
Confidence 5210 11 2799999998763
No 109
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=55.76 E-value=37 Score=38.21 Aligned_cols=93 Identities=13% Similarity=0.140 Sum_probs=56.5
Q ss_pred EEEEEEEEEeeccccCCCCCCCCcEEEEEEecCCCCe--EEeeecCCCCCCeeccEEEEEEe--c-CCCcEEEEEEEECC
Q 008334 258 GTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKT--KKSKTINNDLNPIWNEHFEFIVE--D-ESTQHLVVRIYDDE 332 (569)
Q Consensus 258 g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~--~kT~~~~~t~nP~wne~f~f~v~--~-~~~~~L~i~v~d~~ 332 (569)
..++|+|+.+......+ ....+-||.+.+-.++..- .+|+.+.-+.+|.|||...|.+. + +....|.|.+|+..
T Consensus 218 ~~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp SEEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred CceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 56788888876522111 1245678887764222111 23433444667999999888764 3 24568999999753
Q ss_pred CC----------------CCCcceEEEEEEccccC
Q 008334 333 GI----------------QSSELIGCAQVRLCELE 351 (569)
Q Consensus 333 ~~----------------~~d~~iG~~~i~l~~l~ 351 (569)
.. ++...+|.+.++|-+-.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~ 331 (961)
T 1e7u_A 297 KPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHR 331 (961)
T ss_dssp C--------------------CEEEEEEEESBCTT
T ss_pred cCccccccccccccccccccceeEEEEeeeeecCC
Confidence 21 13457999999987653
No 110
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=51.21 E-value=15 Score=41.89 Aligned_cols=91 Identities=19% Similarity=0.230 Sum_probs=58.1
Q ss_pred cEEEEEEEEEeeccccCCCCCCCCcEEEEEEecCCC---CeEEeeecCCCCCCeeccEEEEEEe--cC-CCcEEEEEEEE
Q 008334 257 VGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPE---KTKKSKTINNDLNPIWNEHFEFIVE--DE-STQHLVVRIYD 330 (569)
Q Consensus 257 ~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~---~~~kT~~~~~t~nP~wne~f~f~v~--~~-~~~~L~i~v~d 330 (569)
...++|+|..+.++... ...+-||.+.+-.++. ...+|+.+....+|.|||...|.+. +. ....|.|.+|+
T Consensus 352 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~ 428 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYA 428 (1092)
T ss_dssp CSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCC
T ss_pred CCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEE
Confidence 46889999999988744 3467787766642111 1233544555678999999888765 22 45689999998
Q ss_pred CCCC----------------------CCCcceEEEEEEcccc
Q 008334 331 DEGI----------------------QSSELIGCAQVRLCEL 350 (569)
Q Consensus 331 ~~~~----------------------~~d~~iG~~~i~l~~l 350 (569)
.... +.+..+|.+.+++-+-
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 470 (1092)
T 2y3a_A 429 VLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDF 470 (1092)
T ss_dssp C------------------------------CCEEEEESBCT
T ss_pred ecCccccccccccccccccccccccccccceeEEEeeeeECC
Confidence 6310 1134889999988764
No 111
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=39.46 E-value=6.7 Score=27.82 Aligned_cols=35 Identities=14% Similarity=0.093 Sum_probs=17.4
Q ss_pred chhhhHHHHHHHHHHHHHhhee-eeeeccchhHhhH
Q 008334 3 LMMLFFYFVFLILLLLWLYYYY-YYYYCMKATTIAA 37 (569)
Q Consensus 3 ~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~ 37 (569)
+|++...++.++..++.+|.-. .|.|++.|+-.++
T Consensus 11 LivlGg~~~lll~~glcI~ccvkcrhRrrqAeRMSQ 46 (70)
T 2klu_A 11 LIVLGGVAGLLLFIGLGIFFSVRSRHRRRQAERMSQ 46 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSSCCSSSCTTSSH
T ss_pred HHHHhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3444455555555566666333 4445555544333
Done!