Query 008336
Match_columns 569
No_of_seqs 610 out of 4401
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 23:48:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008336.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008336hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3apo_A DNAJ homolog subfamily 100.0 4.4E-31 1.5E-35 298.4 21.6 289 34-453 451-744 (780)
2 3f8u_A Protein disulfide-isome 100.0 4.7E-28 1.6E-32 258.6 25.4 171 266-487 283-462 (481)
3 2b5e_A Protein disulfide-isome 100.0 5E-29 1.7E-33 267.6 16.2 341 37-450 30-443 (504)
4 3apo_A DNAJ homolog subfamily 99.9 4.5E-26 1.5E-30 257.4 17.8 174 196-448 454-628 (780)
5 3uem_A Protein disulfide-isome 99.9 2E-22 6.8E-27 206.9 25.4 291 40-452 38-337 (361)
6 3idv_A Protein disulfide-isome 99.9 1.3E-22 4.4E-27 195.9 20.1 214 24-319 18-233 (241)
7 3idv_A Protein disulfide-isome 99.9 9.6E-23 3.3E-27 196.8 18.8 203 182-453 17-219 (241)
8 3eur_A Uncharacterized protein 99.9 2.5E-22 8.6E-27 177.3 14.8 121 12-133 4-129 (142)
9 1i5g_A Tryparedoxin II; electr 99.9 1.2E-21 4E-26 173.3 13.9 135 15-149 3-142 (144)
10 2lrn_A Thiol:disulfide interch 99.9 1.6E-21 5.5E-26 174.2 14.9 141 337-497 8-152 (152)
11 1i5g_A Tryparedoxin II; electr 99.9 2E-21 6.8E-26 171.9 15.2 132 337-469 6-142 (144)
12 3s9f_A Tryparedoxin; thioredox 99.9 3.9E-22 1.3E-26 180.8 10.8 137 13-150 22-163 (165)
13 3ewl_A Uncharacterized conserv 99.9 2.1E-21 7.2E-26 171.2 15.2 118 14-132 2-124 (142)
14 3s9f_A Tryparedoxin; thioredox 99.9 1.8E-21 6.2E-26 176.4 13.7 132 338-471 28-164 (165)
15 3eur_A Uncharacterized protein 99.9 2.8E-21 9.5E-26 170.5 14.2 119 334-455 7-131 (142)
16 3ewl_A Uncharacterized conserv 99.9 3.4E-21 1.2E-25 169.8 14.7 116 335-453 4-125 (142)
17 1o8x_A Tryparedoxin, TRYX, TXN 99.9 5.6E-21 1.9E-25 169.4 15.0 133 336-470 6-143 (146)
18 4fo5_A Thioredoxin-like protei 99.9 1.6E-21 5.4E-26 172.3 11.3 119 14-133 8-129 (143)
19 1o8x_A Tryparedoxin, TRYX, TXN 99.9 5.2E-21 1.8E-25 169.6 13.7 125 14-139 3-131 (146)
20 1o73_A Tryparedoxin; electron 99.8 8E-21 2.8E-25 167.8 14.1 126 13-139 2-131 (144)
21 4fo5_A Thioredoxin-like protei 99.8 3.2E-21 1.1E-25 170.3 11.2 116 336-454 11-130 (143)
22 1o73_A Tryparedoxin; electron 99.8 1.8E-20 6.3E-25 165.5 15.8 133 335-469 5-142 (144)
23 2f9s_A Thiol-disulfide oxidore 99.8 1.3E-20 4.4E-25 168.0 14.0 140 337-493 5-145 (151)
24 3fw2_A Thiol-disulfide oxidore 99.8 2.1E-20 7.1E-25 166.5 15.3 120 14-134 6-133 (150)
25 3drn_A Peroxiredoxin, bacterio 99.8 8E-21 2.7E-25 171.4 12.4 138 336-487 6-150 (161)
26 3fw2_A Thiol-disulfide oxidore 99.8 2E-20 6.7E-25 166.7 14.7 116 336-454 9-133 (150)
27 3gl3_A Putative thiol:disulfid 99.8 3.6E-20 1.2E-24 165.2 15.4 137 337-489 8-145 (152)
28 3kcm_A Thioredoxin family prot 99.8 2E-20 6.7E-25 167.3 12.8 145 335-494 5-151 (154)
29 3eyt_A Uncharacterized protein 99.8 2.7E-20 9.1E-25 167.2 13.5 135 337-488 5-154 (158)
30 3lor_A Thiol-disulfide isomera 99.8 1.9E-20 6.5E-25 168.5 12.5 137 335-488 6-157 (160)
31 3fkf_A Thiol-disulfide oxidore 99.8 7.1E-20 2.4E-24 162.3 15.9 119 14-133 6-130 (148)
32 3hcz_A Possible thiol-disulfid 99.8 1.9E-20 6.5E-25 165.9 12.2 134 336-485 9-145 (148)
33 3raz_A Thioredoxin-related pro 99.8 3.2E-20 1.1E-24 165.5 13.6 136 338-491 5-145 (151)
34 2lrn_A Thiol:disulfide interch 99.8 3.3E-20 1.1E-24 165.6 13.6 119 14-133 4-125 (152)
35 4g2e_A Peroxiredoxin; redox pr 99.8 3.9E-21 1.3E-25 172.6 6.6 136 336-484 8-156 (157)
36 3fkf_A Thiol-disulfide oxidore 99.8 4.8E-20 1.6E-24 163.4 13.5 130 337-486 10-146 (148)
37 2lrt_A Uncharacterized protein 99.8 4.6E-20 1.6E-24 164.7 13.4 114 336-454 13-130 (152)
38 3u5r_E Uncharacterized protein 99.8 2.4E-20 8.1E-25 177.1 12.2 146 336-489 36-190 (218)
39 3or5_A Thiol:disulfide interch 99.8 9.1E-20 3.1E-24 164.9 13.9 141 336-494 12-159 (165)
40 3drn_A Peroxiredoxin, bacterio 99.8 3E-19 1E-23 161.0 17.2 116 14-133 3-126 (161)
41 3gkn_A Bacterioferritin comigr 99.8 6.1E-20 2.1E-24 165.9 12.6 136 336-486 11-162 (163)
42 2lrt_A Uncharacterized protein 99.8 1.1E-19 3.6E-24 162.4 13.9 119 12-133 8-129 (152)
43 2lja_A Putative thiol-disulfid 99.8 9.6E-20 3.3E-24 162.4 13.3 137 337-489 8-146 (152)
44 3eyt_A Uncharacterized protein 99.8 6E-20 2.1E-24 164.9 11.9 118 15-133 2-133 (158)
45 1a8l_A Protein disulfide oxido 99.8 7.8E-19 2.7E-23 167.6 20.3 185 196-454 21-208 (226)
46 3lor_A Thiol-disulfide isomera 99.8 6.1E-20 2.1E-24 165.2 11.7 121 12-133 2-136 (160)
47 2f9s_A Thiol-disulfide oxidore 99.8 2.1E-19 7.2E-24 160.1 14.9 116 15-133 2-119 (151)
48 3hcz_A Possible thiol-disulfid 99.8 2.6E-20 9E-25 165.1 8.9 120 13-133 5-127 (148)
49 3gl3_A Putative thiol:disulfid 99.8 3.3E-19 1.1E-23 158.9 16.0 116 14-133 4-121 (152)
50 3raz_A Thioredoxin-related pro 99.8 3.6E-19 1.2E-23 158.6 15.4 116 16-133 2-121 (151)
51 4g2e_A Peroxiredoxin; redox pr 99.8 7.2E-20 2.5E-24 164.3 10.4 116 14-133 5-134 (157)
52 1jfu_A Thiol:disulfide interch 99.8 1.4E-19 4.9E-24 167.3 12.7 139 336-488 38-182 (186)
53 2l5o_A Putative thioredoxin; s 99.8 1.4E-19 4.8E-24 161.5 12.1 140 335-491 5-146 (153)
54 4evm_A Thioredoxin family prot 99.8 3.7E-19 1.3E-23 155.1 14.0 115 338-455 2-122 (138)
55 3u5r_E Uncharacterized protein 99.8 3.3E-19 1.1E-23 169.2 14.7 118 14-134 33-160 (218)
56 1nm3_A Protein HI0572; hybrid, 99.8 9.4E-19 3.2E-23 168.8 17.8 115 14-133 4-139 (241)
57 3lwa_A Secreted thiol-disulfid 99.8 3.5E-19 1.2E-23 164.2 14.2 116 336-454 35-163 (183)
58 4gqc_A Thiol peroxidase, perox 99.8 8.2E-21 2.8E-25 171.6 2.9 138 336-486 9-160 (164)
59 2lja_A Putative thiol-disulfid 99.8 5.2E-19 1.8E-23 157.6 14.6 118 14-133 4-124 (152)
60 1lu4_A Soluble secreted antige 99.8 2.1E-19 7E-24 156.8 11.6 111 337-453 3-114 (136)
61 3kcm_A Thioredoxin family prot 99.8 5.1E-19 1.7E-23 158.0 14.2 118 13-133 2-122 (154)
62 3or5_A Thiol:disulfide interch 99.8 7.1E-19 2.4E-23 159.0 14.9 117 13-133 8-132 (165)
63 2cvb_A Probable thiol-disulfid 99.8 4.5E-19 1.6E-23 164.2 13.7 142 337-489 12-162 (188)
64 3ha9_A Uncharacterized thiored 99.8 3.7E-19 1.3E-23 161.0 12.6 110 338-452 17-145 (165)
65 1zzo_A RV1677; thioredoxin fol 99.8 3.8E-19 1.3E-23 154.9 12.0 112 337-453 4-116 (136)
66 1sji_A Calsequestrin 2, calseq 99.8 5.2E-18 1.8E-22 173.0 22.2 272 37-446 27-315 (350)
67 2ggt_A SCO1 protein homolog, m 99.8 8.6E-19 3E-23 158.3 14.2 134 338-486 3-161 (164)
68 3erw_A Sporulation thiol-disul 99.8 8.2E-19 2.8E-23 154.7 13.4 118 12-133 8-130 (145)
69 3kh7_A Thiol:disulfide interch 99.8 7.6E-19 2.6E-23 160.9 13.7 114 13-133 30-148 (176)
70 3ixr_A Bacterioferritin comigr 99.8 4.3E-19 1.5E-23 163.0 11.5 133 338-485 31-177 (179)
71 3lwa_A Secreted thiol-disulfid 99.8 1E-18 3.5E-23 161.0 13.7 118 13-133 31-162 (183)
72 3dwv_A Glutathione peroxidase- 99.8 2.2E-19 7.6E-24 166.1 9.2 135 337-487 25-184 (187)
73 3kh7_A Thiol:disulfide interch 99.8 1.2E-18 4.1E-23 159.5 13.5 114 335-454 33-149 (176)
74 2lus_A Thioredoxion; CR-Trp16, 99.7 1.2E-20 4.1E-25 166.4 0.0 121 338-458 4-129 (143)
75 3erw_A Sporulation thiol-disul 99.8 1.2E-18 4.2E-23 153.6 12.9 115 336-454 13-131 (145)
76 2l5o_A Putative thioredoxin; s 99.8 1.1E-18 3.9E-23 155.6 12.8 117 13-132 2-121 (153)
77 1xvw_A Hypothetical protein RV 99.8 5E-19 1.7E-23 159.3 10.6 134 337-484 14-158 (160)
78 3ha9_A Uncharacterized thiored 99.8 5.6E-19 1.9E-23 159.9 10.7 114 13-132 11-145 (165)
79 2ls5_A Uncharacterized protein 99.6 1.5E-20 5E-25 169.2 0.0 115 337-454 12-131 (159)
80 1xzo_A BSSCO, hypothetical pro 99.8 8.6E-19 2.9E-23 160.0 11.8 138 337-487 12-173 (174)
81 3gkn_A Bacterioferritin comigr 99.8 1.8E-18 6E-23 156.2 13.7 116 14-133 8-140 (163)
82 3ia1_A THIO-disulfide isomeras 99.8 1.8E-18 6.1E-23 154.5 13.6 132 337-489 10-147 (154)
83 2cvb_A Probable thiol-disulfid 99.8 2.1E-18 7.1E-23 159.7 14.5 117 13-133 7-132 (188)
84 2b5x_A YKUV protein, TRXY; thi 99.8 9.5E-19 3.2E-23 154.9 11.6 133 337-487 6-146 (148)
85 2rli_A SCO2 protein homolog, m 99.8 2.2E-18 7.5E-23 156.8 14.2 116 339-455 7-147 (171)
86 2b5x_A YKUV protein, TRXY; thi 99.8 1.6E-18 5.3E-23 153.5 12.6 115 15-133 3-126 (148)
87 2ywi_A Hypothetical conserved 99.8 1.1E-18 3.7E-23 162.7 11.9 145 337-489 23-177 (196)
88 1zzo_A RV1677; thioredoxin fol 99.8 5.3E-18 1.8E-22 147.6 15.6 111 16-131 2-115 (136)
89 3kij_A Probable glutathione pe 99.8 1.8E-18 6.2E-23 158.9 13.2 121 12-133 11-151 (180)
90 2c0d_A Thioredoxin peroxidase 99.8 9.2E-19 3.2E-23 165.9 11.4 137 336-485 29-183 (221)
91 1lu4_A Soluble secreted antige 99.8 5.8E-18 2E-22 147.5 15.1 110 17-131 2-113 (136)
92 3hdc_A Thioredoxin family prot 99.8 2E-18 6.7E-23 155.1 12.2 115 13-133 15-131 (158)
93 2h01_A 2-Cys peroxiredoxin; th 99.8 1.7E-18 6E-23 160.8 12.3 136 337-485 5-158 (192)
94 3hdc_A Thioredoxin family prot 99.8 1.1E-18 3.7E-23 156.8 10.6 113 337-455 20-133 (158)
95 3cmi_A Peroxiredoxin HYR1; thi 99.8 6.9E-19 2.3E-23 160.4 8.9 114 337-454 11-150 (171)
96 2f8a_A Glutathione peroxidase 99.8 3.4E-18 1.1E-22 160.7 13.9 116 337-455 25-190 (208)
97 1xvw_A Hypothetical protein RV 99.8 4.1E-18 1.4E-22 153.3 13.9 119 13-133 9-137 (160)
98 2v1m_A Glutathione peroxidase; 99.8 2.9E-18 9.8E-23 155.6 12.9 119 14-133 6-148 (169)
99 1psq_A Probable thiol peroxida 99.8 1.4E-18 4.8E-23 156.9 10.7 133 337-483 21-162 (163)
100 2hls_A Protein disulfide oxido 99.8 1.4E-17 4.7E-22 160.5 18.3 179 198-453 26-209 (243)
101 2p31_A CL683, glutathione pero 99.8 8.7E-19 3E-23 161.2 9.4 116 336-454 27-163 (181)
102 1n8j_A AHPC, alkyl hydroperoxi 99.8 1.2E-18 4.1E-23 161.0 10.4 117 336-455 5-135 (186)
103 3ia1_A THIO-disulfide isomeras 99.8 9.7E-18 3.3E-22 149.7 15.9 115 14-133 6-125 (154)
104 2i81_A 2-Cys peroxiredoxin; st 99.8 1.7E-18 5.8E-23 163.4 11.5 137 336-485 25-179 (213)
105 3ixr_A Bacterioferritin comigr 99.8 2.8E-18 9.4E-23 157.5 12.6 117 13-133 25-156 (179)
106 2h30_A Thioredoxin, peptide me 99.8 2.2E-18 7.6E-23 155.6 11.8 109 344-454 25-138 (164)
107 2jsy_A Probable thiol peroxida 99.8 7.3E-19 2.5E-23 159.5 8.6 135 337-485 23-166 (167)
108 3us3_A Calsequestrin-1; calciu 99.8 8.1E-17 2.8E-21 165.0 24.8 279 37-449 29-320 (367)
109 1we0_A Alkyl hydroperoxide red 99.8 1.4E-18 4.6E-23 160.9 10.5 116 337-455 6-136 (187)
110 1jfu_A Thiol:disulfide interch 99.8 7.5E-18 2.5E-22 155.6 15.0 117 14-133 35-159 (186)
111 2f8a_A Glutathione peroxidase 99.8 3E-18 1E-22 161.0 12.4 119 14-133 21-188 (208)
112 2p5q_A Glutathione peroxidase 99.8 2.5E-18 8.6E-23 156.2 11.5 117 336-455 10-151 (170)
113 2v1m_A Glutathione peroxidase; 99.8 1.7E-18 6E-23 157.1 10.4 116 337-455 10-150 (169)
114 2c0d_A Thioredoxin peroxidase 99.8 4.7E-18 1.6E-22 161.0 13.7 116 14-133 26-161 (221)
115 2vup_A Glutathione peroxidase- 99.8 2.1E-18 7.2E-23 160.0 11.0 134 337-487 27-186 (190)
116 1we0_A Alkyl hydroperoxide red 99.8 5.5E-18 1.9E-22 156.8 13.7 116 14-133 2-134 (187)
117 3cmi_A Peroxiredoxin HYR1; thi 99.8 1.4E-18 4.8E-23 158.3 9.4 116 16-133 9-149 (171)
118 2ywm_A Glutaredoxin-like prote 99.8 1.1E-17 3.6E-22 160.1 15.8 174 197-450 21-199 (229)
119 2bmx_A Alkyl hydroperoxidase C 99.8 2.5E-18 8.7E-23 160.1 11.2 137 337-486 9-170 (195)
120 2p5q_A Glutathione peroxidase 99.8 4E-18 1.4E-22 154.8 12.2 119 14-133 7-149 (170)
121 2i3y_A Epididymal secretory gl 99.8 8.4E-18 2.9E-22 158.2 14.7 134 336-487 33-212 (215)
122 2pn8_A Peroxiredoxin-4; thiore 99.8 2.4E-18 8.4E-23 162.1 11.0 137 336-485 23-176 (211)
123 2p31_A CL683, glutathione pero 99.8 9.4E-19 3.2E-23 161.0 7.8 119 13-133 23-162 (181)
124 4gqc_A Thiol peroxidase, perox 99.8 2.2E-19 7.6E-24 162.2 3.4 115 15-133 7-136 (164)
125 1uul_A Tryparedoxin peroxidase 99.7 3.6E-18 1.2E-22 160.1 11.5 137 336-485 10-164 (202)
126 1zof_A Alkyl hydroperoxide-red 99.7 3.5E-18 1.2E-22 159.6 11.3 136 337-485 6-160 (198)
127 4evm_A Thioredoxin family prot 99.7 2.1E-17 7.3E-22 143.8 15.7 112 18-133 1-120 (138)
128 1n8j_A AHPC, alkyl hydroperoxi 99.7 6.3E-18 2.2E-22 156.1 12.9 116 14-133 2-133 (186)
129 2bmx_A Alkyl hydroperoxidase C 99.7 1E-17 3.5E-22 156.0 14.4 116 14-133 5-147 (195)
130 2gs3_A PHGPX, GPX-4, phospholi 99.7 4.7E-18 1.6E-22 156.9 11.9 119 14-133 24-167 (185)
131 3p7x_A Probable thiol peroxida 99.7 2E-18 6.8E-23 156.5 9.0 132 337-483 25-165 (166)
132 2hyx_A Protein DIPZ; thioredox 99.7 3.4E-18 1.2E-22 172.5 11.5 115 337-454 56-181 (352)
133 2ywi_A Hypothetical conserved 99.7 3.6E-18 1.2E-22 159.2 10.9 117 14-133 19-146 (196)
134 2obi_A PHGPX, GPX-4, phospholi 99.7 5.4E-18 1.8E-22 156.2 11.9 116 336-454 25-166 (183)
135 3ztl_A Thioredoxin peroxidase; 99.7 5.6E-18 1.9E-22 161.0 12.2 117 336-455 44-177 (222)
136 1a8l_A Protein disulfide oxido 99.7 3E-17 1E-21 156.6 17.3 182 35-290 19-204 (226)
137 2a4v_A Peroxiredoxin DOT5; yea 99.7 3E-18 1E-22 154.1 9.4 114 336-455 11-134 (159)
138 1qmv_A Human thioredoxin perox 99.7 5.8E-18 2E-22 158.0 11.7 137 336-485 9-162 (197)
139 1xzo_A BSSCO, hypothetical pro 99.7 7.2E-18 2.5E-22 153.8 12.1 120 14-133 8-151 (174)
140 2i81_A 2-Cys peroxiredoxin; st 99.7 1.1E-17 3.7E-22 157.8 13.7 116 14-133 22-157 (213)
141 3mng_A Peroxiredoxin-5, mitoch 99.7 7.7E-18 2.6E-22 153.0 12.0 118 11-133 13-152 (173)
142 3me7_A Putative uncharacterize 99.7 1.2E-17 4.1E-22 151.9 13.3 119 15-133 3-142 (170)
143 1zof_A Alkyl hydroperoxide-red 99.7 9.3E-18 3.2E-22 156.7 12.9 116 14-133 2-138 (198)
144 2h01_A 2-Cys peroxiredoxin; th 99.7 8.9E-18 3.1E-22 156.0 12.7 115 15-133 2-136 (192)
145 2pn8_A Peroxiredoxin-4; thiore 99.7 1E-17 3.6E-22 157.7 13.3 116 14-133 20-154 (211)
146 2vup_A Glutathione peroxidase- 99.7 3.6E-18 1.2E-22 158.4 10.0 118 15-133 24-166 (190)
147 2gs3_A PHGPX, GPX-4, phospholi 99.7 5E-18 1.7E-22 156.7 10.8 117 336-455 27-169 (185)
148 2obi_A PHGPX, GPX-4, phospholi 99.7 6E-18 2.1E-22 155.9 11.2 120 13-133 21-165 (183)
149 1uul_A Tryparedoxin peroxidase 99.7 1.6E-17 5.5E-22 155.6 14.3 116 14-133 7-142 (202)
150 3dwv_A Glutathione peroxidase- 99.7 8.4E-19 2.9E-23 162.2 5.4 118 15-133 22-164 (187)
151 2yzh_A Probable thiol peroxida 99.7 4.5E-18 1.5E-22 155.0 10.1 133 337-484 26-170 (171)
152 3kij_A Probable glutathione pe 99.7 8E-18 2.7E-22 154.6 11.7 118 335-455 15-153 (180)
153 4hde_A SCO1/SENC family lipopr 99.7 1.4E-17 4.7E-22 151.4 13.1 139 335-485 9-169 (170)
154 1psq_A Probable thiol peroxida 99.7 1.3E-17 4.4E-22 150.6 12.8 116 13-133 16-141 (163)
155 3ztl_A Thioredoxin peroxidase; 99.7 1.7E-17 5.8E-22 157.7 14.3 116 14-133 41-175 (222)
156 1qmv_A Human thioredoxin perox 99.7 1.8E-17 6.1E-22 154.6 14.2 116 14-133 6-140 (197)
157 1zye_A Thioredoxin-dependent p 99.7 8.3E-18 2.8E-22 159.6 12.0 138 336-486 31-185 (220)
158 2ywm_A Glutaredoxin-like prote 99.7 9.2E-17 3.1E-21 153.6 19.4 173 36-289 19-198 (229)
159 2b7k_A SCO1 protein; metalloch 99.7 2.1E-17 7.1E-22 154.5 14.6 117 339-455 22-162 (200)
160 3me7_A Putative uncharacterize 99.7 1.4E-17 4.8E-22 151.4 13.0 140 337-489 6-165 (170)
161 2rli_A SCO2 protein homolog, m 99.7 3.6E-17 1.2E-21 148.7 15.7 116 18-133 4-145 (171)
162 1tp9_A Peroxiredoxin, PRX D (t 99.7 7.4E-18 2.5E-22 152.0 11.0 115 337-455 9-144 (162)
163 2ggt_A SCO1 protein homolog, m 99.7 1.8E-17 6.1E-22 149.6 13.5 116 18-133 2-142 (164)
164 4hde_A SCO1/SENC family lipopr 99.7 1.4E-17 4.9E-22 151.3 12.7 124 10-133 3-149 (170)
165 1q98_A Thiol peroxidase, TPX; 99.7 3.8E-18 1.3E-22 154.4 8.8 114 337-455 22-147 (165)
166 3qpm_A Peroxiredoxin; oxidored 99.7 1E-17 3.5E-22 160.8 12.1 118 335-455 51-185 (240)
167 2b1k_A Thiol:disulfide interch 99.7 1.4E-17 4.7E-22 151.1 12.3 114 14-133 23-141 (168)
168 1kng_A Thiol:disulfide interch 99.7 1E-17 3.5E-22 149.8 10.7 116 13-133 8-133 (156)
169 2r37_A Glutathione peroxidase 99.7 2.9E-17 9.8E-22 153.9 14.0 115 336-454 15-175 (207)
170 2r37_A Glutathione peroxidase 99.7 3.5E-17 1.2E-21 153.3 14.5 118 14-133 12-174 (207)
171 2wfc_A Peroxiredoxin 5, PRDX5; 99.7 1.2E-17 4E-22 151.2 10.6 115 14-133 4-138 (167)
172 3p7x_A Probable thiol peroxida 99.7 1.2E-17 3.9E-22 151.4 10.5 114 14-133 21-144 (166)
173 2k6v_A Putative cytochrome C o 99.7 9.3E-18 3.2E-22 152.7 9.9 116 337-455 15-154 (172)
174 1kng_A Thiol:disulfide interch 99.7 1.8E-17 6E-22 148.2 11.4 113 336-454 12-134 (156)
175 2hyx_A Protein DIPZ; thioredox 99.7 1.7E-17 5.8E-22 167.4 12.6 118 13-133 51-180 (352)
176 3zrd_A Thiol peroxidase; oxido 99.7 7.2E-18 2.5E-22 157.4 9.1 114 337-455 57-182 (200)
177 2ls5_A Uncharacterized protein 99.6 3.4E-19 1.2E-23 160.2 0.0 117 14-133 8-130 (159)
178 1q98_A Thiol peroxidase, TPX; 99.7 9E-18 3.1E-22 152.0 9.4 115 14-133 18-145 (165)
179 2lus_A Thioredoxion; CR-Trp16, 99.6 3.5E-19 1.2E-23 156.9 0.0 122 18-139 3-130 (143)
180 3qpm_A Peroxiredoxin; oxidored 99.7 4.7E-17 1.6E-21 156.2 14.5 116 14-133 49-183 (240)
181 2wfc_A Peroxiredoxin 5, PRDX5; 99.7 2.5E-17 8.6E-22 149.0 12.0 115 337-455 8-140 (167)
182 1zye_A Thioredoxin-dependent p 99.7 5E-17 1.7E-21 154.2 14.0 117 13-133 27-162 (220)
183 2b1k_A Thiol:disulfide interch 99.7 2E-17 6.7E-22 150.1 10.7 113 336-455 26-143 (168)
184 1tp9_A Peroxiredoxin, PRX D (t 99.7 1.9E-17 6.5E-22 149.3 10.5 115 14-133 5-142 (162)
185 2r2j_A Thioredoxin domain-cont 99.7 1.6E-15 5.4E-20 156.4 26.2 285 25-446 9-302 (382)
186 3uma_A Hypothetical peroxiredo 99.7 1.7E-17 5.7E-22 152.4 9.8 116 13-133 26-163 (184)
187 2b7k_A SCO1 protein; metalloch 99.7 9.6E-17 3.3E-21 150.0 15.2 123 11-133 11-160 (200)
188 3zrd_A Thiol peroxidase; oxido 99.7 1.5E-17 5E-22 155.4 9.3 115 14-133 53-180 (200)
189 2k6v_A Putative cytochrome C o 99.7 1.5E-17 5E-22 151.4 9.1 119 13-133 10-152 (172)
190 3uma_A Hypothetical peroxiredo 99.7 1.4E-17 4.9E-22 152.8 8.9 134 336-480 30-183 (184)
191 2yzh_A Probable thiol peroxida 99.7 4.1E-17 1.4E-21 148.5 11.8 113 14-133 22-148 (171)
192 2i3y_A Epididymal secretory gl 99.7 7.2E-17 2.5E-21 151.8 13.6 118 14-133 30-192 (215)
193 1xvq_A Thiol peroxidase; thior 99.7 1.5E-17 5.2E-22 152.0 8.4 113 337-455 23-146 (175)
194 3mng_A Peroxiredoxin-5, mitoch 99.7 5E-17 1.7E-21 147.6 11.8 117 336-456 19-155 (173)
195 3tjj_A Peroxiredoxin-4; thiore 99.7 2.5E-17 8.6E-22 159.0 10.3 118 335-455 65-199 (254)
196 2h30_A Thioredoxin, peptide me 99.7 2.2E-17 7.7E-22 148.9 8.9 115 15-133 16-137 (164)
197 2pwj_A Mitochondrial peroxired 99.7 3E-17 1E-21 149.3 9.6 116 336-455 11-152 (171)
198 2v2g_A Peroxiredoxin 6; oxidor 99.7 4.4E-17 1.5E-21 155.1 11.2 136 336-485 7-164 (233)
199 2jsy_A Probable thiol peroxida 99.7 1.5E-17 5.1E-22 150.8 7.0 116 13-133 18-143 (167)
200 1xvq_A Thiol peroxidase; thior 99.7 3.7E-17 1.3E-21 149.4 9.7 113 14-133 19-144 (175)
201 1v5n_A PDI-like hypothetical p 99.7 9.3E-18 3.2E-22 132.5 4.6 80 463-542 1-81 (89)
202 3tjj_A Peroxiredoxin-4; thiore 99.7 1.2E-16 4.2E-21 154.2 12.8 116 14-133 63-197 (254)
203 1prx_A HORF6; peroxiredoxin, h 99.7 1.1E-16 3.9E-21 151.8 11.5 136 336-485 9-168 (224)
204 2a4v_A Peroxiredoxin DOT5; yea 99.7 7.1E-17 2.4E-21 145.0 9.6 114 14-133 8-132 (159)
205 1nm3_A Protein HI0572; hybrid, 99.7 1.8E-16 6.2E-21 152.8 12.2 139 336-483 7-164 (241)
206 3keb_A Probable thiol peroxida 99.7 9.5E-17 3.3E-21 150.3 9.3 133 336-485 26-175 (224)
207 1xcc_A 1-Cys peroxiredoxin; un 99.7 1.4E-16 4.7E-21 150.8 10.2 135 336-485 7-165 (220)
208 2pwj_A Mitochondrial peroxired 99.7 1.2E-16 4.2E-21 145.2 9.0 116 13-133 7-150 (171)
209 2v2g_A Peroxiredoxin 6; oxidor 99.7 3.8E-16 1.3E-20 148.7 12.6 115 14-133 4-142 (233)
210 3uem_A Protein disulfide-isome 99.7 6.5E-16 2.2E-20 158.2 15.2 189 40-287 138-331 (361)
211 3sbc_A Peroxiredoxin TSA1; alp 99.7 2.8E-16 9.7E-21 145.9 11.1 139 334-485 25-180 (216)
212 1prx_A HORF6; peroxiredoxin, h 99.7 8.8E-16 3E-20 145.7 14.3 115 14-133 6-146 (224)
213 3a2v_A Probable peroxiredoxin; 99.6 7.2E-16 2.4E-20 147.7 12.7 116 13-133 5-139 (249)
214 3a2v_A Probable peroxiredoxin; 99.6 2.3E-16 7.8E-21 151.1 8.8 137 335-485 8-161 (249)
215 1xcc_A 1-Cys peroxiredoxin; un 99.6 9.5E-16 3.2E-20 145.0 12.1 115 14-133 4-143 (220)
216 2hls_A Protein disulfide oxido 99.6 8.9E-15 3E-19 140.7 18.1 171 40-290 28-206 (243)
217 3keb_A Probable thiol peroxida 99.6 6.3E-16 2.2E-20 144.7 9.1 112 14-133 23-152 (224)
218 3sbc_A Peroxiredoxin TSA1; alp 99.6 3.5E-15 1.2E-19 138.5 13.4 117 13-133 23-158 (216)
219 3zzx_A Thioredoxin; oxidoreduc 99.6 1.6E-15 5.3E-20 125.8 9.3 71 356-454 19-89 (105)
220 3tue_A Tryparedoxin peroxidase 99.6 1.9E-15 6.4E-20 140.6 10.7 139 334-485 28-184 (219)
221 4eo3_A Bacterioferritin comigr 99.6 3E-15 1E-19 149.6 12.9 130 337-485 3-138 (322)
222 3q6o_A Sulfhydryl oxidase 1; p 99.6 8.3E-15 2.8E-19 141.3 15.5 69 37-127 29-99 (244)
223 3hxs_A Thioredoxin, TRXP; elec 99.6 3.8E-15 1.3E-19 130.7 10.5 84 343-452 37-120 (141)
224 3tue_A Tryparedoxin peroxidase 99.6 1.5E-14 5.3E-19 134.5 12.5 116 14-133 27-162 (219)
225 2l57_A Uncharacterized protein 99.6 9.8E-15 3.4E-19 125.4 9.7 107 345-489 14-120 (126)
226 3t58_A Sulfhydryl oxidase 1; o 99.5 2.1E-14 7.1E-19 152.5 13.0 80 25-126 16-98 (519)
227 2ju5_A Thioredoxin disulfide i 99.5 6.3E-15 2.2E-19 131.5 7.2 115 344-486 34-152 (154)
228 3hxs_A Thioredoxin, TRXP; elec 99.5 4.1E-14 1.4E-18 124.1 12.0 83 24-132 37-120 (141)
229 3ul3_B Thioredoxin, thioredoxi 99.5 5.8E-14 2E-18 121.0 12.1 84 344-454 29-112 (128)
230 2av4_A Thioredoxin-like protei 99.5 1.9E-14 6.5E-19 125.0 8.7 69 357-452 41-109 (160)
231 3fk8_A Disulphide isomerase; A 99.5 5.9E-14 2E-18 121.7 11.0 77 357-456 29-110 (133)
232 2fwh_A Thiol:disulfide interch 99.5 1.4E-14 4.8E-19 126.0 6.6 92 337-451 9-105 (134)
233 4eo3_A Bacterioferritin comigr 99.5 1.4E-13 4.7E-18 137.5 14.3 108 17-132 2-116 (322)
234 3zzx_A Thioredoxin; oxidoreduc 99.5 4.8E-14 1.6E-18 116.8 9.1 71 35-133 17-88 (105)
235 2fwh_A Thiol:disulfide interch 99.5 2.3E-14 7.8E-19 124.6 6.6 96 13-131 4-105 (134)
236 2l57_A Uncharacterized protein 99.5 1.3E-13 4.5E-18 118.3 11.1 83 26-132 14-97 (126)
237 3ul3_B Thioredoxin, thioredoxi 99.5 9.2E-14 3.2E-18 119.7 10.1 90 16-133 21-111 (128)
238 3f3q_A Thioredoxin-1; His TAG, 99.5 5E-14 1.7E-18 117.7 7.7 71 356-454 23-93 (109)
239 2l5l_A Thioredoxin; structural 99.5 1.4E-13 4.6E-18 120.0 10.6 70 357-452 38-107 (136)
240 3qfa_C Thioredoxin; protein-pr 99.5 5.7E-14 2E-18 118.8 7.4 71 356-454 30-100 (116)
241 4f82_A Thioredoxin reductase; 99.5 1.6E-13 5.6E-18 123.3 9.6 104 348-455 37-156 (176)
242 3tco_A Thioredoxin (TRXA-1); d 99.5 1.6E-13 5.3E-18 114.2 8.7 72 356-454 20-91 (109)
243 2qgv_A Hydrogenase-1 operon pr 99.4 3.3E-14 1.1E-18 122.1 4.4 94 357-490 34-129 (140)
244 2qsi_A Putative hydrogenase ex 99.4 1.3E-13 4.4E-18 117.9 7.8 72 357-455 33-106 (137)
245 3p2a_A Thioredoxin 2, putative 99.4 3.1E-13 1E-17 119.6 10.6 105 344-489 42-146 (148)
246 3ed3_A Protein disulfide-isome 99.4 4.6E-13 1.6E-17 132.7 13.0 86 20-130 16-103 (298)
247 4f82_A Thioredoxin reductase; 99.4 2.2E-13 7.6E-18 122.4 9.4 116 13-133 10-154 (176)
248 3d22_A TRXH4, thioredoxin H-ty 99.4 8.3E-14 2.9E-18 121.8 6.5 94 355-491 44-137 (139)
249 2voc_A Thioredoxin; electron t 99.4 3E-13 1E-17 113.4 9.7 72 356-454 16-87 (112)
250 1nsw_A Thioredoxin, TRX; therm 99.4 2.1E-13 7.1E-18 112.8 8.5 72 356-454 16-87 (105)
251 2kuc_A Putative disulphide-iso 99.4 1.1E-13 3.9E-18 119.3 6.9 100 350-487 20-122 (130)
252 3q6o_A Sulfhydryl oxidase 1; p 99.4 2.9E-12 1E-16 123.4 17.5 192 196-454 29-222 (244)
253 2trx_A Thioredoxin; electron t 99.4 4.8E-13 1.7E-17 111.2 10.3 72 356-454 19-90 (108)
254 1xfl_A Thioredoxin H1; AT3G510 99.4 3.7E-13 1.3E-17 115.2 9.7 71 356-454 37-107 (124)
255 3ph9_A Anterior gradient prote 99.4 1E-13 3.6E-18 122.2 6.4 104 356-489 43-148 (151)
256 2pu9_C TRX-F, thioredoxin F-ty 99.4 3E-13 1E-17 113.2 8.9 74 354-454 21-94 (111)
257 2ju5_A Thioredoxin disulfide i 99.4 1E-13 3.5E-18 123.6 6.1 102 15-133 26-132 (154)
258 3die_A Thioredoxin, TRX; elect 99.4 5.2E-13 1.8E-17 110.5 10.0 72 356-454 18-89 (106)
259 3d6i_A Monothiol glutaredoxin- 99.4 3.3E-13 1.1E-17 113.1 8.8 73 356-454 20-92 (112)
260 3h79_A Thioredoxin-like protei 99.4 9.2E-13 3.1E-17 113.2 11.8 83 23-129 17-104 (127)
261 2dj1_A Protein disulfide-isome 99.4 7.4E-13 2.5E-17 115.8 11.2 84 344-451 21-104 (140)
262 1z6n_A Hypothetical protein PA 99.4 1.5E-13 5E-18 123.7 6.7 76 352-454 49-127 (167)
263 1t00_A Thioredoxin, TRX; redox 99.4 5.3E-13 1.8E-17 111.8 9.8 72 356-454 22-93 (112)
264 3cxg_A Putative thioredoxin; m 99.4 1.7E-13 5.7E-18 119.0 6.8 94 350-486 33-129 (133)
265 3fk8_A Disulphide isomerase; A 99.4 6.1E-13 2.1E-17 115.3 10.3 99 32-160 23-130 (133)
266 2av4_A Thioredoxin-like protei 99.4 7E-13 2.4E-17 115.1 10.5 68 37-131 40-108 (160)
267 1gh2_A Thioredoxin-like protei 99.4 4.9E-13 1.7E-17 111.1 9.2 71 356-454 20-90 (107)
268 1dby_A Chloroplast thioredoxin 99.4 8.7E-13 3E-17 109.4 10.6 71 357-454 19-89 (107)
269 1ep7_A Thioredoxin CH1, H-type 99.4 4.5E-13 1.5E-17 112.2 8.9 71 357-454 24-94 (112)
270 2o8v_B Thioredoxin 1; disulfid 99.4 4.4E-13 1.5E-17 115.4 9.1 72 356-454 39-110 (128)
271 3f9u_A Putative exported cytoc 99.4 1.4E-13 4.9E-18 125.0 6.3 103 350-455 40-148 (172)
272 1qgv_A Spliceosomal protein U5 99.4 1E-12 3.6E-17 115.2 11.5 71 357-454 23-93 (142)
273 1w4v_A Thioredoxin, mitochondr 99.4 5.3E-13 1.8E-17 113.3 9.3 72 356-454 30-101 (119)
274 3gix_A Thioredoxin-like protei 99.4 7.5E-13 2.5E-17 117.2 10.6 70 356-452 22-91 (149)
275 4euy_A Uncharacterized protein 99.4 6.7E-13 2.3E-17 109.9 9.5 71 356-454 17-87 (105)
276 3p2a_A Thioredoxin 2, putative 99.4 1.5E-12 5E-17 115.2 12.3 90 16-132 32-123 (148)
277 3h79_A Thioredoxin-like protei 99.4 2.2E-12 7.4E-17 110.8 12.9 72 356-450 32-105 (127)
278 2l5l_A Thioredoxin; structural 99.4 1.1E-12 3.8E-17 114.2 11.1 70 37-132 37-107 (136)
279 3m9j_A Thioredoxin; oxidoreduc 99.4 5.3E-13 1.8E-17 110.3 8.6 71 356-454 19-89 (105)
280 1sen_A Thioredoxin-like protei 99.4 2.2E-14 7.4E-19 129.3 -0.0 111 350-489 39-151 (164)
281 2wz9_A Glutaredoxin-3; protein 99.4 7.6E-13 2.6E-17 117.7 9.7 89 356-487 31-119 (153)
282 1xwb_A Thioredoxin; dimerizati 99.4 1.1E-12 3.7E-17 108.5 9.9 72 356-454 19-90 (106)
283 2dml_A Protein disulfide-isome 99.4 8.4E-13 2.9E-17 113.8 9.2 72 356-453 34-105 (130)
284 1z6n_A Hypothetical protein PA 99.4 2.5E-13 8.7E-18 122.1 6.0 75 32-133 48-126 (167)
285 1thx_A Thioredoxin, thioredoxi 99.4 1.1E-12 3.9E-17 110.2 9.7 72 356-454 24-95 (115)
286 1x5e_A Thioredoxin domain cont 99.4 2.2E-12 7.4E-17 110.6 11.6 68 358-451 23-90 (126)
287 1r26_A Thioredoxin; redox-acti 99.4 8.8E-13 3E-17 113.0 8.9 70 356-453 36-105 (125)
288 2ppt_A Thioredoxin-2; thiredox 99.4 1.1E-12 3.8E-17 116.9 9.8 72 356-454 63-134 (155)
289 2i4a_A Thioredoxin; acidophIle 99.4 3E-12 1E-16 106.0 11.8 72 356-454 19-90 (107)
290 2xc2_A Thioredoxinn; oxidoredu 99.4 6.1E-13 2.1E-17 112.5 7.6 72 354-454 30-101 (117)
291 3aps_A DNAJ homolog subfamily 99.4 4.6E-13 1.6E-17 114.1 6.8 67 357-449 21-87 (122)
292 1x5d_A Protein disulfide-isome 99.4 4.1E-12 1.4E-16 109.8 12.8 74 356-453 24-98 (133)
293 3gnj_A Thioredoxin domain prot 99.4 2.8E-12 9.5E-17 107.0 11.2 71 357-454 22-92 (111)
294 2dj1_A Protein disulfide-isome 99.4 2.6E-12 8.9E-17 112.2 11.4 85 23-132 19-105 (140)
295 3f3q_A Thioredoxin-1; His TAG, 99.4 1.3E-12 4.4E-17 109.0 8.9 78 27-132 13-91 (109)
296 1faa_A Thioredoxin F; electron 99.4 1.1E-12 3.8E-17 112.1 8.5 73 355-454 35-107 (124)
297 1x5e_A Thioredoxin domain cont 99.4 3.3E-12 1.1E-16 109.5 11.4 83 23-132 9-91 (126)
298 2vlu_A Thioredoxin, thioredoxi 99.4 1.8E-12 6.1E-17 110.4 9.5 71 356-454 33-103 (122)
299 2oe3_A Thioredoxin-3; electron 99.4 1.6E-12 5.4E-17 109.4 9.0 70 357-454 30-99 (114)
300 2dj3_A Protein disulfide-isome 99.4 6.5E-13 2.2E-17 115.0 6.7 83 23-129 9-93 (133)
301 2vim_A Thioredoxin, TRX; thior 99.4 1.8E-12 6E-17 106.8 9.0 71 356-454 18-88 (104)
302 2yzu_A Thioredoxin; redox prot 99.4 2.4E-12 8.3E-17 106.9 9.9 71 357-454 18-88 (109)
303 3hz4_A Thioredoxin; NYSGXRC, P 99.4 1.6E-12 5.3E-17 113.8 8.8 71 357-454 24-94 (140)
304 2lst_A Thioredoxin; structural 99.0 6.8E-14 2.3E-18 120.8 0.0 83 347-453 9-97 (130)
305 1syr_A Thioredoxin; SGPP, stru 99.4 2.2E-12 7.4E-17 108.1 9.2 70 357-454 26-95 (112)
306 2j23_A Thioredoxin; immune pro 99.3 1E-12 3.5E-17 111.9 7.2 72 356-453 32-103 (121)
307 2f51_A Thioredoxin; electron t 99.3 1.3E-12 4.4E-17 110.7 7.8 71 357-454 23-96 (118)
308 1fb6_A Thioredoxin M; electron 99.3 5.3E-12 1.8E-16 104.1 11.2 72 356-454 17-88 (105)
309 3qfa_C Thioredoxin; protein-pr 99.3 2.6E-12 8.8E-17 108.5 9.2 70 35-132 28-98 (116)
310 2dj3_A Protein disulfide-isome 99.3 1.6E-12 5.3E-17 112.6 8.0 83 344-450 11-94 (133)
311 3uvt_A Thioredoxin domain-cont 99.3 3E-12 1E-16 106.8 9.4 74 357-454 21-94 (111)
312 3tco_A Thioredoxin (TRXA-1); d 99.3 3.5E-12 1.2E-16 106.0 9.6 81 25-132 8-89 (109)
313 2e0q_A Thioredoxin; electron t 99.3 2.5E-12 8.6E-17 105.7 8.7 71 356-454 15-85 (104)
314 2o8v_B Thioredoxin 1; disulfid 99.3 3.2E-12 1.1E-16 109.9 9.5 90 16-132 17-108 (128)
315 2vm1_A Thioredoxin, thioredoxi 99.3 2.7E-12 9.3E-17 108.4 8.9 70 357-454 28-97 (118)
316 2voc_A Thioredoxin; electron t 99.3 4.4E-12 1.5E-16 106.3 9.9 69 37-132 16-85 (112)
317 2xhf_A Peroxiredoxin 5; oxidor 99.3 1.5E-12 5.1E-17 116.9 7.4 116 336-455 18-150 (171)
318 3apq_A DNAJ homolog subfamily 99.3 1.3E-12 4.6E-17 122.7 7.3 105 344-489 101-205 (210)
319 1ti3_A Thioredoxin H, PTTRXH1; 99.3 2.4E-12 8.1E-17 107.9 7.8 71 356-454 25-95 (113)
320 2i1u_A Thioredoxin, TRX, MPT46 99.3 3.4E-12 1.2E-16 108.3 8.9 72 356-454 29-100 (121)
321 2trx_A Thioredoxin; electron t 99.3 1E-11 3.6E-16 103.0 11.5 81 25-132 6-88 (108)
322 1nsw_A Thioredoxin, TRX; therm 99.3 3E-12 1E-16 105.8 8.1 69 37-132 16-85 (105)
323 3gix_A Thioredoxin-like protei 99.3 2.7E-12 9.4E-17 113.5 8.1 69 37-132 22-91 (149)
324 1v98_A Thioredoxin; oxidoreduc 99.3 8E-12 2.7E-16 109.2 10.9 71 357-454 50-120 (140)
325 4euy_A Uncharacterized protein 99.3 3.5E-12 1.2E-16 105.5 8.2 68 37-132 17-85 (105)
326 2qsi_A Putative hydrogenase ex 99.3 2.4E-12 8.4E-17 110.0 7.3 69 38-133 33-104 (137)
327 1xiy_A Peroxiredoxin, pfaop; a 99.3 5.6E-12 1.9E-16 114.7 10.0 141 337-482 6-178 (182)
328 3uvt_A Thioredoxin domain-cont 99.3 7E-12 2.4E-16 104.5 10.0 70 38-132 21-92 (111)
329 3dxb_A Thioredoxin N-terminall 99.3 4.9E-12 1.7E-16 119.9 10.0 93 356-489 29-121 (222)
330 2xhf_A Peroxiredoxin 5; oxidor 99.3 4E-12 1.4E-16 114.1 8.8 120 9-133 10-148 (171)
331 2pu9_C TRX-F, thioredoxin F-ty 99.3 6.2E-12 2.1E-16 105.1 9.5 72 34-132 20-92 (111)
332 2djj_A PDI, protein disulfide- 99.3 4.1E-12 1.4E-16 107.9 8.4 81 344-450 11-94 (121)
333 3die_A Thioredoxin, TRX; elect 99.3 6.1E-12 2.1E-16 103.9 9.1 69 37-132 18-87 (106)
334 1dby_A Chloroplast thioredoxin 99.3 2.5E-11 8.4E-16 100.5 12.6 69 37-132 18-87 (107)
335 2dj0_A Thioredoxin-related tra 99.3 3.8E-12 1.3E-16 110.9 8.0 75 354-454 23-103 (137)
336 3d6i_A Monothiol glutaredoxin- 99.3 6.3E-12 2.2E-16 105.2 9.1 71 36-132 19-90 (112)
337 2dml_A Protein disulfide-isome 99.3 1.5E-11 5E-16 105.9 11.6 67 37-129 34-101 (130)
338 1zma_A Bacterocin transport ac 99.3 6.9E-12 2.4E-16 106.1 9.3 75 357-454 29-103 (118)
339 1gh2_A Thioredoxin-like protei 99.3 8.5E-12 2.9E-16 103.5 9.6 68 37-132 20-88 (107)
340 1w4v_A Thioredoxin, mitochondr 99.3 2.1E-11 7.1E-16 103.4 12.1 69 37-132 30-99 (119)
341 3gnj_A Thioredoxin domain prot 99.3 2.3E-11 7.8E-16 101.4 12.2 69 37-132 21-90 (111)
342 3ira_A Conserved protein; meth 99.3 4.6E-12 1.6E-16 114.0 8.2 80 356-453 38-120 (173)
343 2l6c_A Thioredoxin; oxidoreduc 99.3 6.6E-12 2.2E-16 104.9 8.6 71 356-454 18-88 (110)
344 2kuc_A Putative disulphide-iso 99.3 2.9E-12 9.8E-17 110.4 6.5 80 29-132 18-101 (130)
345 3qou_A Protein YBBN; thioredox 99.3 7.6E-12 2.6E-16 123.5 10.4 72 356-454 25-96 (287)
346 2dj0_A Thioredoxin-related tra 99.3 4.7E-12 1.6E-16 110.3 7.8 88 20-133 6-102 (137)
347 2djj_A PDI, protein disulfide- 99.3 8.9E-12 3.1E-16 105.8 9.2 80 23-129 9-93 (121)
348 3evi_A Phosducin-like protein 99.3 6.6E-12 2.3E-16 105.9 8.2 88 357-479 23-110 (118)
349 3hz4_A Thioredoxin; NYSGXRC, P 99.3 1.3E-11 4.5E-16 107.9 10.5 81 25-132 10-92 (140)
350 1oaz_A Thioredoxin 1; immune s 99.3 2.5E-12 8.6E-17 109.8 5.7 72 356-454 20-105 (123)
351 1qgv_A Spliceosomal protein U5 99.3 5.2E-12 1.8E-16 110.7 7.8 70 37-133 22-92 (142)
352 1xiy_A Peroxiredoxin, pfaop; a 99.3 1.1E-11 3.8E-16 112.7 9.8 114 15-133 3-150 (182)
353 1t00_A Thioredoxin, TRX; redox 99.3 1.5E-11 5.1E-16 102.8 10.0 69 37-132 22-91 (112)
354 2ppt_A Thioredoxin-2; thiredox 99.3 2.4E-11 8.2E-16 108.2 11.9 69 37-132 63-132 (155)
355 2i4a_A Thioredoxin; acidophIle 99.3 3.4E-11 1.2E-15 99.6 12.0 81 25-132 6-88 (107)
356 1xfl_A Thioredoxin H1; AT3G510 99.3 1.5E-11 5.2E-16 105.1 10.0 70 35-132 35-105 (124)
357 1thx_A Thioredoxin, thioredoxi 99.3 3.5E-11 1.2E-15 100.9 12.0 82 24-132 10-93 (115)
358 3f9u_A Putative exported cytoc 99.3 1.1E-12 3.7E-17 119.2 2.7 101 31-133 40-146 (172)
359 3cxg_A Putative thioredoxin; m 99.3 5.4E-12 1.9E-16 109.3 6.9 73 32-132 34-110 (133)
360 3aps_A DNAJ homolog subfamily 99.3 3.7E-12 1.3E-16 108.4 5.7 68 37-130 20-88 (122)
361 1mek_A Protein disulfide isome 99.3 2.2E-12 7.6E-17 109.1 4.1 72 356-451 23-94 (120)
362 1x5d_A Protein disulfide-isome 99.3 2.8E-11 9.4E-16 104.5 11.1 83 25-132 11-97 (133)
363 3m9j_A Thioredoxin; oxidoreduc 99.3 1.4E-11 4.7E-16 101.7 8.6 70 35-132 17-87 (105)
364 3emx_A Thioredoxin; structural 99.3 3.1E-12 1E-16 111.2 4.8 76 359-454 33-108 (135)
365 2wz9_A Glutaredoxin-3; protein 99.3 1.7E-11 5.9E-16 108.9 9.7 68 37-132 31-99 (153)
366 2oe3_A Thioredoxin-3; electron 99.3 1.8E-11 6.1E-16 103.0 9.3 68 37-132 29-97 (114)
367 2f51_A Thioredoxin; electron t 99.2 1.5E-11 5E-16 104.2 8.5 69 37-132 22-94 (118)
368 3t58_A Sulfhydryl oxidase 1; o 99.2 2.8E-11 9.5E-16 128.5 12.5 188 196-453 29-221 (519)
369 2e0q_A Thioredoxin; electron t 99.2 2.2E-11 7.7E-16 99.9 9.2 68 37-132 15-83 (104)
370 1fb6_A Thioredoxin M; electron 99.2 5.4E-11 1.8E-15 97.9 11.3 69 37-132 17-86 (105)
371 1r26_A Thioredoxin; redox-acti 99.2 2.5E-11 8.6E-16 103.8 9.4 68 37-132 36-104 (125)
372 3evi_A Phosducin-like protein 99.2 1.8E-11 6.2E-16 103.1 8.2 87 37-159 22-110 (118)
373 1ep7_A Thioredoxin CH1, H-type 99.2 2.9E-11 1E-15 100.9 9.5 68 38-132 24-92 (112)
374 2xc2_A Thioredoxinn; oxidoredu 99.2 1.6E-11 5.3E-16 103.7 7.8 70 34-132 29-99 (117)
375 3apq_A DNAJ homolog subfamily 99.2 1.6E-11 5.6E-16 115.2 8.6 82 24-132 100-182 (210)
376 3d22_A TRXH4, thioredoxin H-ty 99.2 2.2E-11 7.4E-16 106.2 8.9 74 31-132 39-113 (139)
377 2vlu_A Thioredoxin, thioredoxi 99.2 3.3E-11 1.1E-15 102.4 9.5 68 37-132 33-101 (122)
378 2qgv_A Hydrogenase-1 operon pr 99.2 4.9E-12 1.7E-16 108.6 4.2 70 37-133 33-106 (140)
379 1fo5_A Thioredoxin; disulfide 99.2 1.9E-11 6.4E-16 96.6 7.4 64 358-450 3-66 (85)
380 1v98_A Thioredoxin; oxidoreduc 99.2 9.8E-11 3.4E-15 102.2 12.7 81 25-132 37-118 (140)
381 2es7_A Q8ZP25_salty, putative 99.2 5.1E-12 1.7E-16 110.5 4.2 92 357-490 34-129 (142)
382 1xwb_A Thioredoxin; dimerizati 99.2 5.6E-11 1.9E-15 98.0 10.3 70 36-132 18-88 (106)
383 1nho_A Probable thioredoxin; b 99.2 1.8E-11 6.1E-16 96.7 6.9 63 359-450 3-65 (85)
384 1wou_A Thioredoxin -related pr 99.2 2.7E-11 9.2E-16 103.3 8.5 78 356-452 23-107 (123)
385 2yzu_A Thioredoxin; redox prot 99.2 5.4E-11 1.9E-15 98.5 10.1 69 37-132 17-86 (109)
386 1faa_A Thioredoxin F; electron 99.2 4E-11 1.4E-15 102.3 9.4 71 35-132 34-105 (124)
387 3qou_A Protein YBBN; thioredox 99.2 2.6E-11 8.8E-16 119.7 9.1 71 35-132 23-94 (287)
388 2vim_A Thioredoxin, TRX; thior 99.2 5.2E-11 1.8E-15 97.9 9.5 70 35-132 16-86 (104)
389 2dbc_A PDCL2, unnamed protein 99.2 3.1E-11 1.1E-15 104.8 8.4 68 357-455 30-97 (135)
390 2l6c_A Thioredoxin; oxidoreduc 99.2 2.2E-11 7.4E-16 101.7 6.8 68 37-132 18-86 (110)
391 3dxb_A Thioredoxin N-terminall 99.2 4.9E-11 1.7E-15 113.0 10.1 85 21-132 12-98 (222)
392 1syr_A Thioredoxin; SGPP, stru 99.2 6.1E-11 2.1E-15 99.2 9.5 68 37-132 25-93 (112)
393 1sen_A Thioredoxin-like protei 99.2 1.6E-12 5.5E-17 117.0 -0.4 80 29-133 37-119 (164)
394 3ph9_A Anterior gradient prote 99.2 6.6E-12 2.3E-16 110.6 3.2 100 32-161 38-140 (151)
395 2i1u_A Thioredoxin, TRX, MPT46 99.2 8.1E-11 2.8E-15 99.7 10.0 69 37-132 29-98 (121)
396 1zma_A Bacterocin transport ac 99.2 4.2E-11 1.5E-15 101.2 8.1 73 37-132 28-101 (118)
397 2lst_A Thioredoxin; structural 98.8 2.2E-12 7.6E-17 111.2 0.0 79 28-130 9-92 (130)
398 1ti3_A Thioredoxin H, PTTRXH1; 99.2 6.5E-11 2.2E-15 98.9 8.9 72 34-133 22-94 (113)
399 3iv4_A Putative oxidoreductase 99.2 6.2E-11 2.1E-15 97.1 8.2 74 357-455 24-98 (112)
400 1wmj_A Thioredoxin H-type; str 99.2 2.9E-12 1E-16 110.3 0.2 71 356-454 35-105 (130)
401 2j23_A Thioredoxin; immune pro 99.2 2.9E-11 9.8E-16 102.8 6.3 70 37-132 32-102 (121)
402 2vm1_A Thioredoxin, thioredoxi 99.2 1E-10 3.4E-15 98.6 9.4 68 37-132 27-95 (118)
403 3emx_A Thioredoxin; structural 99.2 1.9E-11 6.6E-16 106.1 5.0 75 39-133 33-107 (135)
404 3ira_A Conserved protein; meth 99.1 8.5E-11 2.9E-15 105.7 8.9 88 28-133 29-120 (173)
405 3kp8_A Vkorc1/thioredoxin doma 99.1 4.5E-12 1.5E-16 104.9 0.5 73 349-450 4-76 (106)
406 3ed3_A Protein disulfide-isome 99.1 1.2E-10 4.2E-15 115.2 10.8 70 357-451 35-104 (298)
407 3ga4_A Dolichyl-diphosphooligo 99.1 1.8E-10 6.2E-15 103.5 10.8 90 14-127 11-113 (178)
408 2yj7_A LPBCA thioredoxin; oxid 98.7 4.3E-12 1.5E-16 104.6 0.0 71 357-454 19-89 (106)
409 3kp8_A Vkorc1/thioredoxin doma 99.1 5.1E-12 1.7E-16 104.6 -0.0 73 29-130 3-76 (106)
410 2dbc_A PDCL2, unnamed protein 99.1 1.8E-10 6.2E-15 99.9 9.9 88 37-160 29-118 (135)
411 3ga4_A Dolichyl-diphosphooligo 99.1 2E-10 7E-15 103.2 10.3 70 356-448 36-114 (178)
412 1mek_A Protein disulfide isome 99.1 2.7E-11 9.4E-16 102.3 4.3 69 37-130 23-93 (120)
413 1oaz_A Thioredoxin 1; immune s 99.1 2.5E-11 8.6E-16 103.5 3.7 81 25-132 7-103 (123)
414 3us3_A Calsequestrin-1; calciu 99.1 3.6E-10 1.2E-14 115.4 12.9 178 182-446 15-200 (367)
415 1a0r_P Phosducin, MEKA, PP33; 99.1 6E-11 2E-15 113.1 6.3 71 356-455 132-202 (245)
416 3dml_A Putative uncharacterize 99.1 1.9E-11 6.4E-16 101.7 2.4 75 357-454 18-92 (116)
417 1sji_A Calsequestrin 2, calseq 99.1 1.4E-10 4.8E-15 117.9 9.4 165 195-446 26-198 (350)
418 1nho_A Probable thioredoxin; b 99.1 1.1E-10 3.8E-15 92.0 6.5 62 40-130 4-65 (85)
419 1fo5_A Thioredoxin; disulfide 99.1 1.4E-10 4.9E-15 91.4 7.0 62 40-130 5-66 (85)
420 1wou_A Thioredoxin -related pr 99.1 1.6E-10 5.4E-15 98.5 7.2 77 35-130 21-105 (123)
421 2r2j_A Thioredoxin domain-cont 99.1 2.7E-10 9.4E-15 117.1 10.0 73 357-453 22-97 (382)
422 1ilo_A Conserved hypothetical 99.0 6.6E-10 2.3E-14 85.8 8.5 61 41-133 3-63 (77)
423 3qcp_A QSOX from trypanosoma b 99.0 7.5E-10 2.6E-14 114.5 11.3 82 24-129 26-116 (470)
424 1a0r_P Phosducin, MEKA, PP33; 99.0 1.9E-10 6.6E-15 109.5 6.4 91 37-160 132-223 (245)
425 1ilo_A Conserved hypothetical 99.0 5.5E-10 1.9E-14 86.3 7.9 62 360-453 2-63 (77)
426 3iv4_A Putative oxidoreductase 99.0 7.2E-10 2.5E-14 90.8 8.2 72 38-134 24-97 (112)
427 2trc_P Phosducin, MEKA, PP33; 99.0 2.1E-10 7.2E-15 107.8 5.8 71 356-455 119-189 (217)
428 3qcp_A QSOX from trypanosoma b 99.0 2E-10 6.8E-15 118.8 5.9 70 357-449 42-116 (470)
429 3dml_A Putative uncharacterize 99.0 3.3E-11 1.1E-15 100.2 -0.5 71 40-133 21-91 (116)
430 3f8u_A Protein disulfide-isome 99.0 7.6E-09 2.6E-13 109.8 17.7 170 55-289 255-437 (481)
431 2b5e_A Protein disulfide-isome 99.0 1.6E-09 5.4E-14 115.8 11.7 69 356-450 30-98 (504)
432 2trc_P Phosducin, MEKA, PP33; 99.0 3.9E-10 1.3E-14 105.9 5.2 89 37-159 119-209 (217)
433 2es7_A Q8ZP25_salty, putative 99.0 3.7E-10 1.3E-14 98.6 4.5 67 38-132 34-105 (142)
434 2yj7_A LPBCA thioredoxin; oxid 98.5 9.6E-11 3.3E-15 96.4 0.0 69 37-132 18-87 (106)
435 1wmj_A Thioredoxin H-type; str 98.9 1.2E-10 4.2E-15 100.0 -0.6 71 34-132 32-103 (130)
436 2dlx_A UBX domain-containing p 98.9 4.6E-09 1.6E-13 92.4 8.7 73 357-453 42-118 (153)
437 4f9z_D Endoplasmic reticulum r 98.8 8E-09 2.7E-13 98.0 9.6 192 38-323 27-225 (227)
438 2fgx_A Putative thioredoxin; N 98.8 1.8E-08 6.2E-13 82.5 8.0 65 359-453 30-94 (107)
439 1un2_A DSBA, thiol-disulfide i 98.7 6.5E-09 2.2E-13 96.0 5.6 117 266-403 39-159 (197)
440 1ttz_A Conserved hypothetical 98.7 1.4E-08 4.9E-13 80.1 6.6 58 361-452 3-60 (87)
441 2djk_A PDI, protein disulfide- 98.7 1.2E-08 4.2E-13 88.0 6.8 67 357-450 23-92 (133)
442 2fgx_A Putative thioredoxin; N 98.7 3.1E-08 1.1E-12 81.1 8.5 62 40-131 31-92 (107)
443 3hd5_A Thiol:disulfide interch 98.7 3.8E-08 1.3E-12 90.9 9.7 43 356-401 24-66 (195)
444 1ttz_A Conserved hypothetical 98.7 3E-08 1E-12 78.3 7.7 57 41-131 3-59 (87)
445 2djk_A PDI, protein disulfide- 98.7 6.4E-09 2.2E-13 89.7 3.9 105 196-337 22-129 (133)
446 2c0g_A ERP29 homolog, windbeut 98.7 6.9E-08 2.4E-12 92.0 10.7 84 16-129 11-105 (248)
447 1eej_A Thiol:disulfide interch 98.7 2.1E-07 7.2E-12 87.3 13.6 91 352-450 81-192 (216)
448 3gyk_A 27KDA outer membrane pr 98.7 1.8E-07 6E-12 84.7 12.5 50 347-400 12-61 (175)
449 2k8s_A Thioredoxin; dimer, str 98.7 1.6E-08 5.6E-13 78.7 4.6 65 361-453 4-68 (80)
450 2k8s_A Thioredoxin; dimer, str 98.6 3.5E-08 1.2E-12 76.8 4.9 64 41-132 4-67 (80)
451 2dlx_A UBX domain-containing p 98.6 8.6E-08 2.9E-12 84.3 7.9 75 34-132 38-117 (153)
452 1hyu_A AHPF, alkyl hydroperoxi 98.6 1.8E-06 6E-11 92.3 18.8 68 356-453 116-183 (521)
453 2c0g_A ERP29 homolog, windbeut 98.5 2.5E-07 8.5E-12 88.1 10.2 67 357-449 33-105 (248)
454 2e7p_A Glutaredoxin; thioredox 98.5 3.9E-08 1.3E-12 82.4 4.0 68 357-453 19-86 (116)
455 2qc7_A ERP31, ERP28, endoplasm 98.5 4.3E-07 1.5E-11 86.1 11.3 66 37-129 21-94 (240)
456 3gyk_A 27KDA outer membrane pr 98.5 4.6E-07 1.6E-11 81.9 10.6 50 27-79 11-61 (175)
457 1eej_A Thiol:disulfide interch 98.5 3.5E-07 1.2E-11 85.8 10.1 92 31-129 79-191 (216)
458 4f9z_D Endoplasmic reticulum r 98.5 1.4E-06 4.7E-11 82.4 13.9 169 197-449 27-201 (227)
459 2e7p_A Glutaredoxin; thioredox 98.5 1.8E-07 6.1E-12 78.3 6.0 67 37-132 18-85 (116)
460 3h93_A Thiol:disulfide interch 98.5 9.6E-07 3.3E-11 81.1 11.2 43 356-401 24-66 (192)
461 3hd5_A Thiol:disulfide interch 98.4 1.7E-06 5.7E-11 79.7 12.7 42 37-80 24-66 (195)
462 2znm_A Thiol:disulfide interch 98.4 9.3E-07 3.2E-11 81.4 10.7 43 356-401 21-63 (195)
463 2qc7_A ERP31, ERP28, endoplasm 98.4 8E-07 2.8E-11 84.2 9.8 66 357-449 22-94 (240)
464 3kp9_A Vkorc1/thioredoxin doma 98.4 1.1E-07 3.7E-12 92.4 3.4 62 360-450 200-261 (291)
465 1ego_A Glutaredoxin; electron 98.4 6.6E-07 2.3E-11 70.1 7.1 66 361-452 3-70 (85)
466 2h8l_A Protein disulfide-isome 98.4 1.8E-05 6.1E-10 76.0 18.3 206 40-337 27-244 (252)
467 1v58_A Thiol:disulfide interch 98.4 1.4E-06 4.7E-11 83.2 10.1 93 353-450 93-212 (241)
468 1wjk_A C330018D20RIK protein; 98.3 1E-06 3.6E-11 71.5 7.3 63 357-451 15-77 (100)
469 1ego_A Glutaredoxin; electron 98.3 6E-07 2.1E-11 70.3 5.7 66 41-132 3-70 (85)
470 3ec3_A Protein disulfide-isome 98.3 1.3E-05 4.6E-10 76.7 15.6 208 38-338 25-243 (250)
471 2rem_A Disulfide oxidoreductas 98.2 7.8E-06 2.7E-10 74.9 11.9 42 356-400 24-65 (193)
472 1wjk_A C330018D20RIK protein; 98.2 1.7E-06 6E-11 70.2 6.6 60 40-131 18-77 (100)
473 1t3b_A Thiol:disulfide interch 98.2 4.3E-06 1.5E-10 78.0 9.7 86 356-449 85-191 (211)
474 1v58_A Thiol:disulfide interch 98.2 1E-05 3.4E-10 77.1 12.4 97 30-130 89-212 (241)
475 3h93_A Thiol:disulfide interch 98.2 7.8E-06 2.7E-10 74.9 11.2 42 37-80 24-66 (192)
476 3kp9_A Vkorc1/thioredoxin doma 98.2 4E-07 1.4E-11 88.4 1.8 72 30-130 189-261 (291)
477 1hyu_A AHPF, alkyl hydroperoxi 98.2 4.5E-06 1.5E-10 89.1 9.7 66 37-132 116-182 (521)
478 3hz8_A Thiol:disulfide interch 98.1 1.3E-05 4.4E-10 73.6 11.0 44 356-402 23-66 (193)
479 1t3b_A Thiol:disulfide interch 98.1 1.1E-05 3.6E-10 75.3 9.7 86 37-129 85-191 (211)
480 1z6m_A Conserved hypothetical 98.1 3.1E-05 1.1E-09 69.6 12.1 51 350-401 20-70 (175)
481 2znm_A Thiol:disulfide interch 98.0 1.3E-05 4.5E-10 73.5 9.3 42 37-80 21-63 (195)
482 1z6m_A Conserved hypothetical 98.0 5.6E-05 1.9E-09 68.0 12.5 52 29-80 18-70 (175)
483 1h75_A Glutaredoxin-like prote 98.0 1.1E-05 3.6E-10 62.4 6.4 59 361-451 3-61 (81)
484 1r7h_A NRDH-redoxin; thioredox 97.9 3.7E-05 1.3E-09 58.2 8.7 59 361-451 3-61 (75)
485 1h75_A Glutaredoxin-like prote 97.9 2.3E-05 8E-10 60.5 7.6 58 41-130 3-60 (81)
486 1r7h_A NRDH-redoxin; thioredox 97.9 6E-05 2E-09 57.0 8.7 58 41-130 3-60 (75)
487 2rem_A Disulfide oxidoreductas 97.8 7.3E-05 2.5E-09 68.3 10.3 41 37-79 24-65 (193)
488 3hz8_A Thiol:disulfide interch 97.8 6.4E-05 2.2E-09 68.9 9.7 42 37-80 23-65 (193)
489 1kte_A Thioltransferase; redox 97.8 5.3E-05 1.8E-09 61.7 7.2 66 40-132 13-80 (105)
490 2hze_A Glutaredoxin-1; thiored 97.8 2.3E-05 7.7E-10 65.2 5.0 68 37-132 16-87 (114)
491 3bj5_A Protein disulfide-isome 97.7 3.9E-05 1.3E-09 66.9 5.5 124 178-337 12-141 (147)
492 2cq9_A GLRX2 protein, glutared 97.6 0.00011 3.9E-09 62.4 7.8 62 41-132 29-92 (130)
493 1kte_A Thioltransferase; redox 97.6 2.3E-05 7.9E-10 63.9 3.2 68 361-453 14-81 (105)
494 3gv1_A Disulfide interchange p 97.6 0.0003 1E-08 61.1 10.4 86 356-451 13-121 (147)
495 2hze_A Glutaredoxin-1; thiored 97.6 5.9E-05 2E-09 62.6 5.2 67 359-453 19-88 (114)
496 3gv1_A Disulfide interchange p 97.6 0.00025 8.6E-09 61.6 9.3 91 31-130 7-120 (147)
497 3nzn_A Glutaredoxin; structura 97.6 0.00041 1.4E-08 56.2 9.6 60 40-123 23-83 (103)
498 2ht9_A Glutaredoxin-2; thiored 97.6 0.00015 5.1E-09 63.0 7.2 62 41-132 51-114 (146)
499 2cq9_A GLRX2 protein, glutared 97.5 0.00017 5.9E-09 61.3 7.5 63 363-453 31-93 (130)
500 4dvc_A Thiol:disulfide interch 97.5 0.00032 1.1E-08 63.3 9.5 41 357-400 21-61 (184)
No 1
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.97 E-value=4.4e-31 Score=298.45 Aligned_cols=289 Identities=13% Similarity=0.124 Sum_probs=204.5
Q ss_pred CCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHh
Q 008336 34 DSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDEL 112 (569)
Q Consensus 34 ~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 112 (569)
.++.|+ ++|+|||+||++|+.++|.|.+++++++. ++.++.|+++... .+++.
T Consensus 451 ~~~~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~--~v~~~~vd~~~~~------------------------~~~~~ 504 (780)
T 3apo_A 451 PASDKEPWLVDFFAPWSPPSRALLPELRKASTLLYG--QLKVGTLDCTIHE------------------------GLCNM 504 (780)
T ss_dssp CTTCCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCH------------------------HHHHH
T ss_pred HHcCCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CeEEEEEeCCCCH------------------------HHHHH
Confidence 344788 99999999999999999999999999974 5899999998663 48899
Q ss_pred cCCCCccEEEEECCCCcEEEcCCcceeecccCCCCCccHHHHHHHHHHHHHHHhhcccccccccCCCceeecCCCceeee
Q 008336 113 FKVMGIPHLVILDENGKVLSDGGVEIIREYGVEGYPFTVERIKEMKEQEERAKREQSLRSVLTSHSRDFVISSDGRKISV 192 (569)
Q Consensus 113 ~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~ 192 (569)
|+|.++|+++++ ++|++.... | ..+.+.|.++++.... +.+...+++.+..
T Consensus 505 ~~v~~~Pt~~~~-~~g~~~~~~--------g----~~~~~~l~~fi~~~~~----------------~~v~~l~~~~f~~ 555 (780)
T 3apo_A 505 YNIQAYPTTVVF-NQSSIHEYE--------G----HHSAEQILEFIEDLRN----------------PSVVSLTPSTFNE 555 (780)
T ss_dssp TTCCSSSEEEEE-ETTEEEEEC--------S----CSCHHHHHHHHHHHHS----------------CSEEECCHHHHHH
T ss_pred cCCCcCCeEEEE-cCCceeeec--------C----cccHHHHHHHHHhhcc----------------cceeecCcccHHH
Confidence 999999999999 457653221 1 3455666666644211 1122222222221
Q ss_pred cc---ccCcEEEEEEecCCcccchhhhHHHHHHHHHHhcCCCceEEEEeeccccHHHHHHHhcCCCcccccCCchhHHHH
Q 008336 193 SD---LEGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKL 269 (569)
Q Consensus 193 ~~---~~gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ei~~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~l 269 (569)
.. ..++.+++.|+++||++|+.+.|.+.++++.++++ +.|+.+|.+. ...+
T Consensus 556 ~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~~-----v~~~~vd~~~---------------------~~~l 609 (780)
T 3apo_A 556 LVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGL-----INVGSVDCGQ---------------------YHSF 609 (780)
T ss_dssp HTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-----SEEEEEETTT---------------------THHH
T ss_pred HhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCC-----eEEEEEECcc---------------------hHHH
Confidence 11 12467899999999999999999999999999764 6666666653 4578
Q ss_pred HhhcccCCCceEEEECCCCCchhhhhHHHHHhhCCCCCCCChHHHHHHHHHHHHHHhhhhhhhhhccCCccceecCCCCc
Q 008336 270 ARYFELSTLPTLVIIGPDGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGDLDFVVGKNGGK 349 (569)
Q Consensus 270 ~~~f~v~~~Ptlvi~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~f~~~~~g~~ 349 (569)
++.|+|+++|+++++..+++.... . ..| ...+.+.+.+.+++.... +..+...++..
T Consensus 610 ~~~~~v~~~Pti~~~~~~~~~~~~-~----~~y--~g~~~~~~~l~~fi~~~~----------------~~~v~~l~~~~ 666 (780)
T 3apo_A 610 CTQENVQRYPEIRFYPQKSSKAYQ-Y----HSY--NGWNRDAYSLRSWGLGFL----------------PQASIDLTPQT 666 (780)
T ss_dssp HHHTTCCSSSEEEEECCCSSSCCS-C----EEC--CCSCCSHHHHHHHHHTTS----------------CCCSEEECHHH
T ss_pred HHHcCCCCCCeEEEEcCCCcCccc-h----hhc--CCCCCCHHHHHHHHhhhc----------------ccccccCCHHH
Confidence 899999999999999865431100 0 001 011346677777665321 11111122222
Q ss_pred ee-cccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHH
Q 008336 350 VP-VSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKAS 428 (569)
Q Consensus 350 v~-l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 428 (569)
+. .-.-.+++++|+||++||++|+.+.|.|++++++++++ +.++.|+++..+ .
T Consensus 667 ~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~~---~~~~~vd~~~~~-----------------------~ 720 (780)
T 3apo_A 667 FNEKVLQGKTHWVVDFYAPWSGPSQNFAPEFELLARMIKGK---VRAGKVDCQAYP-----------------------Q 720 (780)
T ss_dssp HHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---CEEEEEETTTCH-----------------------H
T ss_pred HHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCC---ceEEEEECCCCH-----------------------H
Confidence 21 00113789999999999999999999999999999754 889999888664 4
Q ss_pred HHHhcCCCCccEEEEECCCCcEEEc
Q 008336 429 LSRKFKVSGIPMLVAIGPSGRTITK 453 (569)
Q Consensus 429 l~~~~~v~~~Pt~~lid~~G~i~~~ 453 (569)
+++.|+|+++||++++ ++|+++.+
T Consensus 721 ~~~~~~v~~~Pt~~~~-~~g~~~~~ 744 (780)
T 3apo_A 721 TCQKAGIKAYPSVKLY-QYERAKKS 744 (780)
T ss_dssp HHHHTTCCSSSEEEEE-EEETTTTE
T ss_pred HHHhcCCCcCCEEEEE-cCCCcccc
Confidence 8899999999999999 78876644
No 2
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.96 E-value=4.7e-28 Score=258.60 Aligned_cols=171 Identities=15% Similarity=0.224 Sum_probs=121.0
Q ss_pred HHHHHhhcccC----CCceEEEECCCCCchhhhhHHHHHhhCCCCCCCChH--HHHHHHHHHHHHHhhhhhhhhhccCCc
Q 008336 266 REKLARYFELS----TLPTLVIIGPDGKTLHSNVAEAIEEHGVGAFPFTPE--KFAELAEIQRAKEESQTLESVLVSGDL 339 (569)
Q Consensus 266 ~~~l~~~f~v~----~~Ptlvi~~~~g~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~ 339 (569)
....+++||+. ..|.+++++.++...... -.++.+ .+..|.....++...+.+++...+...
T Consensus 283 ~~~~l~~~gl~~~~~~~P~~~i~~~~~~ky~~~------------~~~t~e~~~l~~f~~~~~~g~~~~~~~s~~~p~~~ 350 (481)
T 3f8u_A 283 FSHELSDFGLESTAGEIPVVAIRTAKGEKFVMQ------------EEFSRDGKALERFLQDYFDGNLKRYLKSEPIPESN 350 (481)
T ss_dssp THHHHGGGTCCCCTTCSCEEEEECSSSCEEECC------------SCCCTTSHHHHHHHHHHHHTCCCCCCCCCCCCSCC
T ss_pred HHHHHHHcCCCcccCCCcEEEEEcCCCcccCCC------------cccCccHHHHHHHHHHHhcCCcccccccCCCCCCC
Confidence 56678999997 689999998655322110 146778 999999999999888888877665543
Q ss_pred ccee-cCCCCceecccC-CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCc
Q 008336 340 DFVV-GKNGGKVPVSDL-AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWL 417 (569)
Q Consensus 340 ~f~~-~~~g~~v~l~~~-~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~ 417 (569)
+-.+ ..+|+.+..... .+|+|+|+|||+||++|++++|.|.++++.+++. .++.++.|+.+.+
T Consensus 351 ~~~v~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~-~~v~~~~id~~~~-------------- 415 (481)
T 3f8u_A 351 DGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKD-PNIVIAKMDATAN-------------- 415 (481)
T ss_dssp CSSSEEECTTTHHHHHTCTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTC-SSEEEEEEETTSS--------------
T ss_pred CCCeEEecccCHHHHhhcCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccC-CCEEEEEEECCch--------------
Confidence 3222 444444432222 3899999999999999999999999999999763 2477777766543
Q ss_pred ccccCchhhHHHHHhcCCCCccEEEEECCCCcE-EEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhhcC
Q 008336 418 ALPFGDARKASLSRKFKVSGIPMLVAIGPSGRT-ITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKG 487 (569)
Q Consensus 418 ~~~~~~d~~~~l~~~~~v~~~Pt~~lid~~G~i-~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~~~ 487 (569)
++++.|+|.++||+++++++|++ +.+. .| ....+.|.+.|++.+..
T Consensus 416 ----------~~~~~~~v~~~Pt~~~~~~~~~~~~~~~-------~G-------~~~~~~l~~~l~~~~~~ 462 (481)
T 3f8u_A 416 ----------DVPSPYEVRGFPTIYFSPANKKLNPKKY-------EG-------GRELSDFISYLQREATN 462 (481)
T ss_dssp ----------CCCTTCCCCSSSEEEEECTTCTTSCEEC-------CS-------CCSHHHHHHHHHHHCSS
T ss_pred ----------hhHhhCCCcccCEEEEEeCCCeEeeeEe-------CC-------CCCHHHHHHHHHHhcCC
Confidence 25678999999999999887763 2221 11 12345667777766543
No 3
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.96 E-value=5e-29 Score=267.62 Aligned_cols=341 Identities=16% Similarity=0.283 Sum_probs=187.7
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
.++ ++|+|||+||++|+++.|.+.++++.++.. ++.++.|+++... .+++.|+|
T Consensus 30 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~-~v~~~~vd~~~~~------------------------~l~~~~~v 84 (504)
T 2b5e_A 30 SHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEK-NITLAQIDCTENQ------------------------DLCMEHNI 84 (504)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-TCEEEEEETTTCH------------------------HHHHHTTC
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccC-CeEEEEEECCCCH------------------------HHHHhcCC
Confidence 477 999999999999999999999999999865 4999999998774 49999999
Q ss_pred CCccEEEEECCCCc---EEEcCCcceeecccCCCCCccHHHHHHHHHHH------------------H------------
Q 008336 116 MGIPHLVILDENGK---VLSDGGVEIIREYGVEGYPFTVERIKEMKEQE------------------E------------ 162 (569)
Q Consensus 116 ~~~P~~~lid~~G~---i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------------------~------------ 162 (569)
+++||++++. +|+ +....|.+ +.+.+.+++... .
T Consensus 85 ~~~Pt~~~~~-~g~~~~~~~~~G~~------------~~~~l~~~l~~~~~~~v~~i~~~~~~~~~~~~~~~~v~~f~~~ 151 (504)
T 2b5e_A 85 PGFPSLKIFK-NSDVNNSIDYEGPR------------TAEAIVQFMIKQSQPAVAVVADLPAYLANETFVTPVIVQSGKI 151 (504)
T ss_dssp CSSSEEEEEE-TTCTTCEEECCSCC------------SHHHHHHHHHHHTSCSEEECSCHHHHHHHSCCSSCEEEEEESC
T ss_pred CcCCEEEEEe-CCccccceeecCCC------------CHHHHHHHHHHhcCCcceeHHHHHHHHhcCCCceEEEEEeCCC
Confidence 9999999995 565 55444432 222222222111 0
Q ss_pred ----------HHHhh-ccccccccc-----CCCceee-cCCCceeeeccccCc--------EEEEEEecCCcccchhhhH
Q 008336 163 ----------RAKRE-QSLRSVLTS-----HSRDFVI-SSDGRKISVSDLEGK--------TIGLYFSMSSYKASAEFTP 217 (569)
Q Consensus 163 ----------~~~~~-~~l~~~~~~-----~~~d~~~-~~~~~~~~~~~~~gk--------~v~l~f~~~~~~~c~~~~~ 217 (569)
.+... ..+...... .....++ ...+..+. ..|+ .+.-|......|.|..+++
T Consensus 152 ~~~~~~~f~~~A~~~~~~~~F~~~~~~~~~~~~~i~l~~~~~~~~~---~~g~~~~~~~~~~l~~fi~~~~~p~v~~~t~ 228 (504)
T 2b5e_A 152 DADFNATFYSMANKHFNDYDFVSAENADDDFKLSIYLPSAMDEPVV---YNGKKADIADADVFEKWLQVEALPYFGEIDG 228 (504)
T ss_dssp CHHHHHHHHHHHHHTTTTCEEEEEECTTSCCEEEEEETTEEEEEEE---CCSCHHHHTSHHHHHHHHHHHSSCSSCBCCH
T ss_pred CchHHHHHHHHHHHhhcCcEEEEEHHHHHhcCCeEEecCCCCcccc---cCCcccccCCHHHHHHHHHhcccCCcccCCH
Confidence 00000 000000000 0000000 00000000 1111 1111222333344444444
Q ss_pred HHHHHHHHHhcCCCceEEEEeeccccHHHHHHHh--------cCCCcccccCCchhHHHHHhhccc-CCCceEEEECCCC
Q 008336 218 RLVEVYEKLKGKGESFEIVLISLDDEEESFKRDL--------GSMPWLALPFKDKSREKLARYFEL-STLPTLVIIGPDG 288 (569)
Q Consensus 218 ~~~~~~~~~~~~~~~~ei~~v~~d~~~~~~~~~~--------~~~~~~~~~~~d~~~~~l~~~f~v-~~~Ptlvi~~~~g 288 (569)
.... .+.+.+..+.++++..+.....+...+ .++.++.++ ......+++.||+ ..+|++++++...
T Consensus 229 ~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~a~~~~~~i~F~~id--~~~~~~~~~~~gl~~~~P~v~i~~~~~ 303 (504)
T 2b5e_A 229 SVFA---QYVESGLPLGYLFYNDEEELEEYKPLFTELAKKNRGLMNFVSID--ARKFGRHAGNLNMKEQFPLFAIHDMTE 303 (504)
T ss_dssp HHHH---HHHHTTSCEEEEEESSHHHHHHHHHHHHHHHHHTTTTCEEEEEE--HHHHTTHHHHTTCCSCSSEEEEEETTT
T ss_pred hHHH---HHhcCCCcEEEEEecCcccHHHHHHHHHHHHHhcCCeeEEEEEe--hhhhHHHHHHcCCcccCCEEEEEeCCc
Confidence 3322 222223333333332211111111111 112121111 1124567899999 3599999998632
Q ss_pred --Cchhhh-hHHHHHhhCCCCCCCChHHHHHHHHHHHHHHhhhhhhhhhccCCccc-eecCCCCceecccC-CCCEEEEE
Q 008336 289 --KTLHSN-VAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGDLDF-VVGKNGGKVPVSDL-AGKTILLY 363 (569)
Q Consensus 289 --~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~f-~~~~~g~~v~l~~~-~gk~vll~ 363 (569)
++.... ........ ...-.++.+.+..+......+...+.+++...+...+- +...+++.+..... .+|++||+
T Consensus 304 ~~ky~~~~~~~~~~~~~-~~~~~~~~~~l~~f~~~~~~g~~~p~~~s~~~p~~~~~~v~~l~~~~f~~~v~~~~k~vlv~ 382 (504)
T 2b5e_A 304 DLKYGLPQLSEEAFDEL-SDKIVLESKAIESLVKDFLKGDASPIVKSQEIFENQDSSVFQLVGKNHDEIVNDPKKDVLVL 382 (504)
T ss_dssp TEEEECCCCCHHHHHTC-CSCCCCCHHHHHHHHHHHHHTCCCCCCCCCCCCCCCSCSEEEECTTTHHHHHHCTTCCEEEE
T ss_pred CcccCCCCCccchhhcc-ccccccCHHHHHHHHHHHHcCCCChhhhcCCCCccccccceecccccHHHhhccCCCCEEEE
Confidence 222110 00000000 00012688999999998888877777666554433222 22445554432211 37999999
Q ss_pred EecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCCCccEEEE
Q 008336 364 FSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVSGIPMLVA 443 (569)
Q Consensus 364 F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~l 443 (569)
|||+||++|+.+.|.|.++++.++....++.++.++.+.+. +.+ |+|+++||+++
T Consensus 383 F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~------------------------~~~-~~v~~~Pt~~~ 437 (504)
T 2b5e_A 383 YYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTEND------------------------VRG-VVIEGYPTIVL 437 (504)
T ss_dssp EECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCC------------------------CSS-CCCSSSSEEEE
T ss_pred EECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCccc------------------------ccc-CCceecCeEEE
Confidence 99999999999999999999999732234666666554331 233 99999999999
Q ss_pred ECCCCcE
Q 008336 444 IGPSGRT 450 (569)
Q Consensus 444 id~~G~i 450 (569)
+ ++|+.
T Consensus 438 ~-~~G~~ 443 (504)
T 2b5e_A 438 Y-PGGKK 443 (504)
T ss_dssp E-CCTTS
T ss_pred E-eCCce
Confidence 9 77864
No 4
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.93 E-value=4.5e-26 Score=257.44 Aligned_cols=174 Identities=15% Similarity=0.212 Sum_probs=125.6
Q ss_pred cCcEEEEEEecCCcccchhhhHHHHHHHHHHhcCCCceEEEEeeccccHHHHHHHhcCCCcccccCCchhHHHHHhhccc
Q 008336 196 EGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLARYFEL 275 (569)
Q Consensus 196 ~gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ei~~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~f~v 275 (569)
.++.+++.|+++||++|+.+.|.+.+++++++++ +.|+.+|.++ ...+++.|+|
T Consensus 454 ~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~-----v~~~~vd~~~---------------------~~~~~~~~~v 507 (780)
T 3apo_A 454 DKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQ-----LKVGTLDCTI---------------------HEGLCNMYNI 507 (780)
T ss_dssp CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-----CEEEEEETTT---------------------CHHHHHHTTC
T ss_pred CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-----eEEEEEeCCC---------------------CHHHHHHcCC
Confidence 6789999999999999999999999999998743 4455554433 3568899999
Q ss_pred CCCceEEEECCCCCchhhhhHHHHHhhCCCCCCCChHHHHHHHHHHHHHHhhhhhhhhhccCCcccee-cCCCCceeccc
Q 008336 276 STLPTLVIIGPDGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGDLDFVV-GKNGGKVPVSD 354 (569)
Q Consensus 276 ~~~Ptlvi~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~f~~-~~~g~~v~l~~ 354 (569)
+++|++++++. |+.... .| ..+.+.+.+++..... +.+. .+ ..+.+.+....
T Consensus 508 ~~~Pt~~~~~~-g~~~~~--------~g----~~~~~~l~~fi~~~~~----~~v~----------~l~~~~f~~~v~~~ 560 (780)
T 3apo_A 508 QAYPTTVVFNQ-SSIHEY--------EG----HHSAEQILEFIEDLRN----PSVV----------SLTPSTFNELVKQR 560 (780)
T ss_dssp CSSSEEEEEET-TEEEEE--------CS----CSCHHHHHHHHHHHHS----CSEE----------ECCHHHHHHHTTTC
T ss_pred CcCCeEEEEcC-Cceeee--------cC----cccHHHHHHHHHhhcc----ccee----------ecCcccHHHHhhcc
Confidence 99999999954 443110 11 3577788877775443 1111 11 11111111221
Q ss_pred CCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcC
Q 008336 355 LAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFK 434 (569)
Q Consensus 355 ~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~ 434 (569)
-.+++++|.||+|||++|+++.|.+.++++.++++ +.++.++.+... .+++.|+
T Consensus 561 ~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~~---v~~~~vd~~~~~-----------------------~l~~~~~ 614 (780)
T 3apo_A 561 KHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGL---INVGSVDCGQYH-----------------------SFCTQEN 614 (780)
T ss_dssp CTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---SEEEEEETTTTH-----------------------HHHHHTT
T ss_pred CCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCC---eEEEEEECcchH-----------------------HHHHHcC
Confidence 12568999999999999999999999999999864 777777766543 4889999
Q ss_pred CCCccEEEEECCCC
Q 008336 435 VSGIPMLVAIGPSG 448 (569)
Q Consensus 435 v~~~Pt~~lid~~G 448 (569)
|.++|+++++.+++
T Consensus 615 v~~~Pti~~~~~~~ 628 (780)
T 3apo_A 615 VQRYPEIRFYPQKS 628 (780)
T ss_dssp CCSSSEEEEECCCS
T ss_pred CCCCCeEEEEcCCC
Confidence 99999999996543
No 5
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.90 E-value=2e-22 Score=206.86 Aligned_cols=291 Identities=18% Similarity=0.217 Sum_probs=192.9
Q ss_pred EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCCCCcc
Q 008336 40 IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIP 119 (569)
Q Consensus 40 vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P 119 (569)
++|-|+..-+..+ ...|.++++.+. ++.+..+ . + ..+++.|++.. |
T Consensus 38 ~vvgff~~~~~~~---~~~f~~~A~~~~---~~~F~~t--~-~------------------------~~v~~~~~v~~-~ 83 (361)
T 3uem_A 38 AVIGFFKDVESDS---AKQFLQAAEAID---DIPFGIT--S-N------------------------SDVFSKYQLDK-D 83 (361)
T ss_dssp EEEEECSCTTSHH---HHHHHHHHHHCS---SSCEEEE--C-C------------------------HHHHHHTTCSS-S
T ss_pred EEEEEEcCCCchH---HHHHHHHHhcCC---CceEEEE--C-c------------------------HHHHHHhCCCC-C
Confidence 7777777655544 457788888772 2434322 2 2 25888999987 8
Q ss_pred EEEEECC--CCcEEEcCCcceeecccCCCCCccHHHHHHHHHHHHHHHhhcccccccccCCCceeecCCCceeeec-ccc
Q 008336 120 HLVILDE--NGKVLSDGGVEIIREYGVEGYPFTVERIKEMKEQEERAKREQSLRSVLTSHSRDFVISSDGRKISVS-DLE 196 (569)
Q Consensus 120 ~~~lid~--~G~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~~-~~~ 196 (569)
+++++.+ ++.+.. + | +++.+.|.+++.. ...+.+...+.+++... ...
T Consensus 84 ~i~lfk~f~~~~~~~-~--------g----~~~~~~i~~fi~~----------------~~~p~v~~~~~~~~~~~~~~~ 134 (361)
T 3uem_A 84 GVVLFKKFDEGRNNF-E--------G----EVTKENLLDFIKH----------------NQLPLVIEFTEQTAPKIFGGE 134 (361)
T ss_dssp EEEEEESSTTSEEEC-C--------S----CCCHHHHHHHHHH----------------HSSCSEEECSTTTHHHHHSCS
T ss_pred eEEEEEecCCCcccc-C--------C----cCCHHHHHHHHHH----------------cCCCcceecCcccHHHHhcCC
Confidence 8888854 333322 1 1 3466666665543 23344444444433322 223
Q ss_pred CcEEEEEEecCCcccchhhhHHHHHHHHHHhcCCCceEEEEeeccccHHHHHHHhcCCCcccccCCchhHHHHHhhcccC
Q 008336 197 GKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLARYFELS 276 (569)
Q Consensus 197 gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ei~~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~f~v~ 276 (569)
.+.++++|+++||++|..+.+.+.+++++++++ +.|+.+|.+.. ..+.++++|||+
T Consensus 135 ~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~-----i~f~~vd~~~~-------------------~~~~~~~~fgi~ 190 (361)
T 3uem_A 135 IKTHILLFLPKSVSDYDGKLSNFKTAAESFKGK-----ILFIFIDSDHT-------------------DNQRILEFFGLK 190 (361)
T ss_dssp CCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT-----CEEEEECTTSG-------------------GGHHHHHHTTCC
T ss_pred CCcEEEEEEeCCchhHHHHHHHHHHHHHHccCc-----eEEEEecCChH-------------------HHHHHHHHcCCC
Confidence 457889999999999999999999999999865 56666665421 157889999998
Q ss_pred C--CceEEEECCCCCchhhhhHHHHHhhCCCCCCCChHHHHHHHHHHHHHHhhhhhhhhhccCC-cc-ceecCCCCceec
Q 008336 277 T--LPTLVIIGPDGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGD-LD-FVVGKNGGKVPV 352 (569)
Q Consensus 277 ~--~Ptlvi~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~-f~~~~~g~~v~l 352 (569)
. +|++++++.++.. ..|......++.+.+.++......+...+.+++...+.. .+ -+...+++.+..
T Consensus 191 ~~~~P~~~~~~~~~~~---------~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~ 261 (361)
T 3uem_A 191 KEECPAVRLITLEEEM---------TKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFED 261 (361)
T ss_dssp TTTCSEEEEEECC--C---------CEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECTTTHHH
T ss_pred ccCCccEEEEEcCCcc---------cccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcccccCCcEEeecCchhh
Confidence 7 9999999864321 112212236789999999999888877777776555432 11 122333433322
Q ss_pred ccC-CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHH
Q 008336 353 SDL-AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSR 431 (569)
Q Consensus 353 ~~~-~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~ 431 (569)
..+ .+|+++|+|||+||++|+++.|.|.+++++++++ .++.++.|+.+.+. ++
T Consensus 262 ~~~~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~-~~v~~~~vd~~~~~-------------------------~~ 315 (361)
T 3uem_A 262 VAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDH-ENIVIAKMDSTANE-------------------------VE 315 (361)
T ss_dssp HHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTC-SSEEEEEEETTTCB-------------------------CS
T ss_pred hcccCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccC-CcEEEEEEECCccc-------------------------hh
Confidence 212 4899999999999999999999999999999864 24555555544331 56
Q ss_pred hcCCCCccEEEEECCC-CcEEE
Q 008336 432 KFKVSGIPMLVAIGPS-GRTIT 452 (569)
Q Consensus 432 ~~~v~~~Pt~~lid~~-G~i~~ 452 (569)
.|+|+++||+++++++ |+.+.
T Consensus 316 ~~~v~~~Pt~~~~~~~~~~~~~ 337 (361)
T 3uem_A 316 AVKVHSFPTLKFFPASADRTVI 337 (361)
T ss_dssp SCCCCSSSEEEEECSSSSCCCE
T ss_pred hcCCcccCeEEEEECCCCccee
Confidence 7999999999999655 44333
No 6
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.90 E-value=1.3e-22 Score=195.92 Aligned_cols=214 Identities=19% Similarity=0.296 Sum_probs=150.6
Q ss_pred ecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCC-CEEEEEEeCCCCHHHHHHHHHhCCCcccccC
Q 008336 24 IRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQG-DFEVIFVSGDEDDEAFKGYFSKMPWLAVPFS 101 (569)
Q Consensus 24 ~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g-~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~ 101 (569)
..++++.+.....+|+ ++|+|||+||++|+.++|.|.+++++++..+ ++.++.|+++.+.
T Consensus 18 ~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~------------------ 79 (241)
T 3idv_A 18 LVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSAS------------------ 79 (241)
T ss_dssp EEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCH------------------
T ss_pred EEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCH------------------
Confidence 3456665655555788 9999999999999999999999999998653 4889999988664
Q ss_pred CchhHHHHHHhcCCCCccEEEEECCCCcEEEcCCcceeecccCCCCCccHHHHHHHHHHHHHHHhhcccccccccCCCce
Q 008336 102 DSETRDKLDELFKVMGIPHLVILDENGKVLSDGGVEIIREYGVEGYPFTVERIKEMKEQEERAKREQSLRSVLTSHSRDF 181 (569)
Q Consensus 102 ~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~d~ 181 (569)
.+++.|+|.++|++++++ +|+++...| ..+.+.+.+++..... .. + ......
T Consensus 80 ------~l~~~~~v~~~Pt~~~~~-~g~~~~~~g------------~~~~~~l~~~i~~~~~----~~---~--~~~~~~ 131 (241)
T 3idv_A 80 ------VLASRFDVSGYPTIKILK-KGQAVDYEG------------SRTQEEIVAKVREVSQ----PD---W--TPPPEV 131 (241)
T ss_dssp ------HHHHHTTCCSSSEEEEEE-TTEEEECCS------------CSCHHHHHHHHHHHHS----TT---C--CCCCCS
T ss_pred ------HHHHhcCCCcCCEEEEEc-CCCcccccC------------cccHHHHHHHHhhccC----cc---c--cccccc
Confidence 489999999999999995 676654322 3355566655543211 00 0 011112
Q ss_pred eecCCCceeeeccccCcEEEEEEecCCcccchhhhHHHHHHHHHHhcCCCceEEEEeeccccHHHHHHHhcCCCcccccC
Q 008336 182 VISSDGRKISVSDLEGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPF 261 (569)
Q Consensus 182 ~~~~~~~~~~~~~~~gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ei~~v~~d~~~~~~~~~~~~~~~~~~~~ 261 (569)
+...+++.+......++.++++|+++||++|+.+.|.+.+++..++.++..+.++.++.+.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~------------------- 192 (241)
T 3idv_A 132 TLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATA------------------- 192 (241)
T ss_dssp SEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTT-------------------
T ss_pred ceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCC-------------------
Confidence 2333444444333467899999999999999999999999999998765555556565554
Q ss_pred CchhHHHHHhhcccCCCceEEEECCCCCchhhhhHHHHHhhCCCCCCCChHHHHHHHH
Q 008336 262 KDKSREKLARYFELSTLPTLVIIGPDGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAE 319 (569)
Q Consensus 262 ~d~~~~~l~~~f~v~~~Ptlvi~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 319 (569)
...+++.|+|.++||++++.. |+.+.. .| +.+.+.+.++..
T Consensus 193 ----~~~l~~~~~v~~~Pt~~~~~~-g~~~~~--------~g----~~~~~~l~~~l~ 233 (241)
T 3idv_A 193 ----ETDLAKRFDVSGYPTLKIFRK-GRPYDY--------NG----PREKYGIVDYMI 233 (241)
T ss_dssp ----CHHHHHHTTCCSSSEEEEEET-TEEEEC--------CS----CCSHHHHHHHHH
T ss_pred ----CHHHHHHcCCcccCEEEEEEC-CeEEEe--------cC----CCCHHHHHHHHH
Confidence 347889999999999999974 443211 11 356677766665
No 7
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.90 E-value=9.6e-23 Score=196.81 Aligned_cols=203 Identities=20% Similarity=0.318 Sum_probs=146.2
Q ss_pred eecCCCceeeeccccCcEEEEEEecCCcccchhhhHHHHHHHHHHhcCCCceEEEEeeccccHHHHHHHhcCCCcccccC
Q 008336 182 VISSDGRKISVSDLEGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPF 261 (569)
Q Consensus 182 ~~~~~~~~~~~~~~~gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ei~~v~~d~~~~~~~~~~~~~~~~~~~~ 261 (569)
++..+++.+.....+++.++++|+++||++|+.+.|.+.++++.+++.+..+.++.++.+.
T Consensus 17 v~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~------------------- 77 (241)
T 3idv_A 17 VLVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATS------------------- 77 (241)
T ss_dssp EEEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTT-------------------
T ss_pred cEEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccC-------------------
Confidence 4444555555545678999999999999999999999999999998766555555555543
Q ss_pred CchhHHHHHhhcccCCCceEEEECCCCCchhhhhHHHHHhhCCCCCCCChHHHHHHHHHHHHHHhhhhhhhhhccCCccc
Q 008336 262 KDKSREKLARYFELSTLPTLVIIGPDGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGDLDF 341 (569)
Q Consensus 262 ~d~~~~~l~~~f~v~~~Ptlvi~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~f 341 (569)
...+++.|+|.++||+++++. |+.+.. .| ..+.+.+.++........ ....+..
T Consensus 78 ----~~~l~~~~~v~~~Pt~~~~~~-g~~~~~--------~g----~~~~~~l~~~i~~~~~~~---------~~~~~~~ 131 (241)
T 3idv_A 78 ----ASVLASRFDVSGYPTIKILKK-GQAVDY--------EG----SRTQEEIVAKVREVSQPD---------WTPPPEV 131 (241)
T ss_dssp ----CHHHHHHTTCCSSSEEEEEET-TEEEEC--------CS----CSCHHHHHHHHHHHHSTT---------CCCCCCS
T ss_pred ----CHHHHHhcCCCcCCEEEEEcC-CCcccc--------cC----cccHHHHHHHHhhccCcc---------ccccccc
Confidence 357889999999999999964 443211 11 346667766665332211 1112233
Q ss_pred eecCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCccccc
Q 008336 342 VVGKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPF 421 (569)
Q Consensus 342 ~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~ 421 (569)
+...+.+.+...-..+++++|+||++||++|+.+.|.|.+++++++++..++.++.|+++..+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~----------------- 194 (241)
T 3idv_A 132 TLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAET----------------- 194 (241)
T ss_dssp SEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCH-----------------
T ss_pred ceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCH-----------------
Confidence 333333333222223789999999999999999999999999999876556888888888664
Q ss_pred CchhhHHHHHhcCCCCccEEEEECCCCcEEEc
Q 008336 422 GDARKASLSRKFKVSGIPMLVAIGPSGRTITK 453 (569)
Q Consensus 422 ~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~ 453 (569)
++++.|+|+++||+++++ +|+.+..
T Consensus 195 ------~l~~~~~v~~~Pt~~~~~-~g~~~~~ 219 (241)
T 3idv_A 195 ------DLAKRFDVSGYPTLKIFR-KGRPYDY 219 (241)
T ss_dssp ------HHHHHTTCCSSSEEEEEE-TTEEEEC
T ss_pred ------HHHHHcCCcccCEEEEEE-CCeEEEe
Confidence 489999999999999995 6776653
No 8
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.88 E-value=2.5e-22 Score=177.26 Aligned_cols=121 Identities=21% Similarity=0.256 Sum_probs=109.3
Q ss_pred cccccCccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHH---HHHHhcCCCCEEEEEEeCCCCHHHH
Q 008336 12 QSLLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAE---VYNELSRQGDFEVIFVSGDEDDEAF 86 (569)
Q Consensus 12 ~~~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~---~~~~~~~~g~~~vv~v~~d~~~~~~ 86 (569)
...+|.++|+| +.+.+|+.+++++++|| +||+|||+||++|+.++|.|.+ +++++++.+ +.|++|+.|.+.+.+
T Consensus 4 ~~~~G~~ap~f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~-~~vi~i~~d~~~~~~ 82 (142)
T 3eur_A 4 KNRLGTKALNFTYTLDSGVKGTLYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKK-LKVLSIYPDEELDEW 82 (142)
T ss_dssp TTCTTSBCCCCEEEETTSCEEETTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTS-EEEEEEECSSCHHHH
T ss_pred hhcCCCccCCcEEEcCCCCEeeHHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCC-eEEEEEEcCCCHHHH
Confidence 45789999999 56789999999999999 9999999999999999999999 999998764 999999999999999
Q ss_pred HHHHHhCCCcccccCCchhHHHHHHhcCCCCccEEEEECCCCcEEEc
Q 008336 87 KGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 133 (569)
++++++++..++...+......+.+.|++.++|+++|+|++|+|+.+
T Consensus 83 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 129 (142)
T 3eur_A 83 KKHRNDFAKEWTNGYDKELVIKNKNLYDLRAIPTLYLLDKNKTVLLK 129 (142)
T ss_dssp HHHGGGSCTTSEEEECTTCHHHHTTCSCCTTCSEEEEECTTCBEEEE
T ss_pred HHHHHhcccccccccCccchhhhhhhcCCCcCCeEEEECCCCcEEec
Confidence 99999999877766666554457899999999999999999999875
No 9
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.87 E-value=1.2e-21 Score=173.33 Aligned_cols=135 Identities=35% Similarity=0.698 Sum_probs=116.0
Q ss_pred ccCccCC-c-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHH
Q 008336 15 LSSSARD-F-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFS 91 (569)
Q Consensus 15 ~g~~~pd-f-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~ 91 (569)
+|+.+|+ | +.+.+|+.+++++++|| +||+||++||++|+.++|.|.+++++++++.++.|++|++|.+.+.+++|++
T Consensus 3 ~~~~~P~~f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~ 82 (144)
T 1i5g_A 3 LKKFFPYSTNVLKGAAADIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYA 82 (144)
T ss_dssp TTTSCSSCSEEEETTEEEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHT
T ss_pred hhhhCCCceEEEcCCCCEecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHH
Confidence 6789999 8 66789999999999999 9999999999999999999999999998533699999999999999999999
Q ss_pred hCCCcccccCCchhHHHHHHhcCCCCccEEEEEC-CCCcEEEcCCcceeecc-cCCCCCc
Q 008336 92 KMPWLAVPFSDSETRDKLDELFKVMGIPHLVILD-ENGKVLSDGGVEIIREY-GVEGYPF 149 (569)
Q Consensus 92 ~~~~~~~~~~~~~~~~~l~~~~~v~~~P~~~lid-~~G~i~~~~~~~~~~~~-~~~~~~~ 149 (569)
++++..+++...+....+.+.|++.++|+++|+| ++|+++.+.+...+... ....+||
T Consensus 83 ~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~~G~i~~~~~~~~~~~~~~~~~~~w 142 (144)
T 1i5g_A 83 KMPWLALPFEDRKGMEFLTTGFDVKSIPTLVGVEADSGNIITTQARTMVVKDPEAKDFPW 142 (144)
T ss_dssp TCSSEECCTTCHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTC
T ss_pred hCCccccccCchHHHHHHHHHcCCCCCCEEEEEECCCCcEEeccchhhhhhCcccccCCC
Confidence 9998877777545556899999999999999999 99999998766554332 2334444
No 10
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.87 E-value=1.6e-21 Score=174.19 Aligned_cols=141 Identities=19% Similarity=0.339 Sum_probs=119.8
Q ss_pred CCcccee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCC
Q 008336 337 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMP 415 (569)
Q Consensus 337 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~ 415 (569)
..|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|.+++++++++ ++.|++|++|.+.+.+++++++++
T Consensus 8 ~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~d~~~~~~~~~~~~~~ 85 (152)
T 2lrn_A 8 VAPAITGIDLKGNSVSLNDFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDK--GFTIYGVSTDRREEDWKKAIEEDK 85 (152)
T ss_dssp ECCCCEEECSSSCEEESGGGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTT--TEEEEEEECCSCHHHHHHHHHHHT
T ss_pred cCCCceeEcCCCCEEeHHHcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhccC--CeEEEEEEccCCHHHHHHHHHHhC
Confidence 3588988 9999999999999999999999999999999999999999999865 699999999998899999998776
Q ss_pred CcccccCchh---hHHHHHhcCCCCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhhcCCCccc
Q 008336 416 WLALPFGDAR---KASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWPENV 492 (569)
Q Consensus 416 ~~~~~~~~d~---~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~~~~~~~~ 492 (569)
+.+|...|. ...+++.|+|.++|+++|||++|+++.+.. .. ++|.+.|+++++...+..
T Consensus 86 -~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~--------------~~---~~l~~~l~~l~~~~~~~~ 147 (152)
T 2lrn_A 86 -SYWNQVLLQKDDVKDVLESYCIVGFPHIILVDPEGKIVAKEL--------------RG---DDLYNTVEKFVNGAKEGH 147 (152)
T ss_dssp -CCSEEEEECHHHHHHHHHHTTCCSSCEEEEECTTSEEEEECC--------------CT---THHHHHHHHHHTSSSSCC
T ss_pred -CCCeEEecccchhHHHHHHhCCCcCCeEEEECCCCeEEEeeC--------------CH---HHHHHHHHHHHhhccccc
Confidence 567777776 688999999999999999999999999841 11 457777888877666555
Q ss_pred ccccc
Q 008336 493 KHALH 497 (569)
Q Consensus 493 ~~~~~ 497 (569)
.|..|
T Consensus 148 ~~~~~ 152 (152)
T 2lrn_A 148 HHHHH 152 (152)
T ss_dssp SSSCC
T ss_pred cccCC
Confidence 55443
No 11
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.87 E-value=2e-21 Score=171.85 Aligned_cols=132 Identities=42% Similarity=0.752 Sum_probs=116.2
Q ss_pred CCcc-cee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcC
Q 008336 337 GDLD-FVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGM 414 (569)
Q Consensus 337 ~~~~-f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~ 414 (569)
..|+ |.+ +.+|+.+++++++||++||+||++||++|+.++|.|++++++++++ .++.|++|++|.+.+.+++|++++
T Consensus 6 ~~P~~f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~~vv~v~~d~~~~~~~~~~~~~ 84 (144)
T 1i5g_A 6 FFPYSTNVLKGAAADIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEK-KNFEVMLISWDESAEDFKDYYAKM 84 (144)
T ss_dssp SCSSCSEEEETTEEEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCSSHHHHHHHHTTC
T ss_pred hCCCceEEEcCCCCEecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC-CCEEEEEEeCCCCHHHHHHHHHhC
Confidence 4577 877 9999999999999999999999999999999999999999999852 269999999999999999999999
Q ss_pred CCcccccCc-hhhHHHHHhcCCCCccEEEEEC-CCCcEEEccchhhHhhcC-CCCCCC
Q 008336 415 PWLALPFGD-ARKASLSRKFKVSGIPMLVAIG-PSGRTITKEARDMIAVHG-AEAYPF 469 (569)
Q Consensus 415 ~~~~~~~~~-d~~~~l~~~~~v~~~Pt~~lid-~~G~i~~~~~~~~~~~~g-~~~~p~ 469 (569)
+|..+|+.. +....+++.|+|.++|+++||| ++|+++.++++..+.... ...|||
T Consensus 85 ~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~~G~i~~~~~~~~~~~~~~~~~~~w 142 (144)
T 1i5g_A 85 PWLALPFEDRKGMEFLTTGFDVKSIPTLVGVEADSGNIITTQARTMVVKDPEAKDFPW 142 (144)
T ss_dssp SSEECCTTCHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTC
T ss_pred CccccccCchHHHHHHHHHcCCCCCCEEEEEECCCCcEEeccchhhhhhCcccccCCC
Confidence 999999886 6678899999999999999999 999999998877665443 334454
No 12
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.87 E-value=3.9e-22 Score=180.81 Aligned_cols=137 Identities=34% Similarity=0.703 Sum_probs=119.7
Q ss_pred ccccCccCCc--eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHH
Q 008336 13 SLLSSSARDF--LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGY 89 (569)
Q Consensus 13 ~~~g~~~pdf--~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~ 89 (569)
..+|.++|+| +.+.+| .+++++++|| +||+|||+||++|+.++|.|.++++++++..++.|++|++|.+.+.+++|
T Consensus 22 ~~vG~~~P~f~~l~~~~g-~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~ 100 (165)
T 3s9f_A 22 SGVAKHLGEALKLRKQAD-TADMDSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAY 100 (165)
T ss_dssp CHHHHHHHHTSCEEETTE-EECSGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHH
T ss_pred hhhcccCCcceeeecCCC-cccHHHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHH
Confidence 3579999999 556889 9999999999 99999999999999999999999999987446999999999999999999
Q ss_pred HHhCCCcccccCCchhHHHHHHhcCCCCccEEEEECCC-CcEEEcCCcce-eecccCCCCCcc
Q 008336 90 FSKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILDEN-GKVLSDGGVEI-IREYGVEGYPFT 150 (569)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~-G~i~~~~~~~~-~~~~~~~~~~~~ 150 (569)
+++++|..+++...+....+++.|+|.++|+++|||++ |+|+.+.+... ..+.....+||.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~lid~~~G~iv~~~~~~~~~~d~~~~~fpw~ 163 (165)
T 3s9f_A 101 YAKMPWLSIPFANRNIVEALTKKYSVESIPTLIGLNADTGDTVTTRARHALTQDPMGEQFPWR 163 (165)
T ss_dssp HTTCSSEECCTTCHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTCC
T ss_pred HHhCCCcccccCchhHHHHHHHHcCCCCCCEEEEEeCCCCEEEecccHHHHhhCcccccCCCC
Confidence 99999988888776666789999999999999999998 99999877543 344555566765
No 13
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.87 E-value=2.1e-21 Score=171.16 Aligned_cols=118 Identities=21% Similarity=0.366 Sum_probs=105.1
Q ss_pred cccCccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHH---HHHHhcCCCCEEEEEEeCCCCHHHHHH
Q 008336 14 LLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAE---VYNELSRQGDFEVIFVSGDEDDEAFKG 88 (569)
Q Consensus 14 ~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~---~~~~~~~~g~~~vv~v~~d~~~~~~~~ 88 (569)
.+|.++|+| +.+.+|+.+++++++|| +||+||++||++|+.++|.|.+ +++++++.+ +.|++|++|.+.+.+++
T Consensus 2 ~~G~~~p~f~l~~~~g~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~-~~~v~v~~d~~~~~~~~ 80 (142)
T 3ewl_A 2 NAGMKAADFTYVTVHGDNSRMSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGT-LRVLAIYPDENREEWAT 80 (142)
T ss_dssp CTTSBCCCCEEECTTCCEEEGGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTS-EEEEEEECSSCHHHHHH
T ss_pred CCCCcCCCCEEECCCCCEEEhhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCC-eEEEEEEecCCHHHHHH
Confidence 579999999 56789999999999999 9999999999999999999998 999998764 99999999999999999
Q ss_pred HHHhCCCcccccCCchhHHHHHHhcCCCCccEEEEECCCCcEEE
Q 008336 89 YFSKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~ 132 (569)
|++++++.+..+.+........+.|++.++|+++|+|++|+|+.
T Consensus 81 ~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~ 124 (142)
T 3ewl_A 81 KAVYMPQGWIVGWNKAGDIRTRQLYDIRATPTIYLLDGRKRVIL 124 (142)
T ss_dssp HHTTSCTTCEEEECTTCHHHHTTCSCCCSSSEEEEECTTCBEEE
T ss_pred HHHHcCCCcceeeCCccchhhHHHcCCCCCCeEEEECCCCCEEe
Confidence 99999987777776665322234899999999999999999987
No 14
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.86 E-value=1.8e-21 Score=176.37 Aligned_cols=132 Identities=32% Similarity=0.772 Sum_probs=115.1
Q ss_pred Cccc-ee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCC
Q 008336 338 DLDF-VV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMP 415 (569)
Q Consensus 338 ~~~f-~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~ 415 (569)
.|+| .+ +.+| .+++++++||++||+||++||++|++++|.|.+++++++++ .++.|++|++|.+.+.+++++++++
T Consensus 28 ~P~f~~l~~~~g-~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~-~~v~vv~v~~d~~~~~~~~~~~~~~ 105 (165)
T 3s9f_A 28 LGEALKLRKQAD-TADMDSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDS-KNFEIILASWDEEEDDFNAYYAKMP 105 (165)
T ss_dssp HHHTSCEEETTE-EECSGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCCSHHHHHHHHTTCS
T ss_pred CCcceeeecCCC-cccHHHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccC-CCeEEEEEecCCCHHHHHHHHHhCC
Confidence 3677 56 8899 99999999999999999999999999999999999999862 2699999999999999999999999
Q ss_pred CcccccCchhh-HHHHHhcCCCCccEEEEECCC-CcEEEccchhhH-hhcCCCCCCCCH
Q 008336 416 WLALPFGDARK-ASLSRKFKVSGIPMLVAIGPS-GRTITKEARDMI-AVHGAEAYPFTE 471 (569)
Q Consensus 416 ~~~~~~~~d~~-~~l~~~~~v~~~Pt~~lid~~-G~i~~~~~~~~~-~~~g~~~~p~~~ 471 (569)
|..+|+..+.. ..+++.|+|.++|+++|||++ |+|+.++++..+ .......|||.+
T Consensus 106 ~~~~~~~~~~~~~~l~~~~~v~~~Pt~~lid~~~G~iv~~~~~~~~~~d~~~~~fpw~~ 164 (165)
T 3s9f_A 106 WLSIPFANRNIVEALTKKYSVESIPTLIGLNADTGDTVTTRARHALTQDPMGEQFPWRD 164 (165)
T ss_dssp SEECCTTCHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTCCC
T ss_pred CcccccCchhHHHHHHHHcCCCCCCEEEEEeCCCCEEEecccHHHHhhCcccccCCCCC
Confidence 99999887544 889999999999999999998 999999887654 334455577653
No 15
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.86 E-value=2.8e-21 Score=170.49 Aligned_cols=119 Identities=17% Similarity=0.269 Sum_probs=105.6
Q ss_pred hccCCcccee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHH---HHHHHhhcCCCeEEEEEeCCCChhHHHH
Q 008336 334 LVSGDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLID---AYKKIKERNESLEVVFISSDRDQTSFDE 409 (569)
Q Consensus 334 ~~~~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~---l~~~~~~~~~~~~vv~is~d~~~~~~~~ 409 (569)
.....|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|.+ ++++++++ ++.|++|+.|.+.+.+++
T Consensus 7 ~G~~ap~f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~--~~~vi~i~~d~~~~~~~~ 84 (142)
T 3eur_A 7 LGTKALNFTYTLDSGVKGTLYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAK--KLKVLSIYPDEELDEWKK 84 (142)
T ss_dssp TTSBCCCCEEEETTSCEEETTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTT--SEEEEEEECSSCHHHHHH
T ss_pred CCCccCCcEEEcCCCCEeeHHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccC--CeEEEEEEcCCCHHHHHH
Confidence 3455799988 99999999999999999999999999999999999999 99999865 799999999999999999
Q ss_pred HHhcCCCcccccCchhhH--HHHHhcCCCCccEEEEECCCCcEEEccc
Q 008336 410 FFKGMPWLALPFGDARKA--SLSRKFKVSGIPMLVAIGPSGRTITKEA 455 (569)
Q Consensus 410 ~~~~~~~~~~~~~~d~~~--~l~~~~~v~~~Pt~~lid~~G~i~~~~~ 455 (569)
++++++ +.++...|... .+++.|+|.++|+++|||++|+|+.++.
T Consensus 85 ~~~~~~-~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~ 131 (142)
T 3eur_A 85 HRNDFA-KEWTNGYDKELVIKNKNLYDLRAIPTLYLLDKNKTVLLKDA 131 (142)
T ss_dssp HGGGSC-TTSEEEECTTCHHHHTTCSCCTTCSEEEEECTTCBEEEEEE
T ss_pred HHHhcc-cccccccCccchhhhhhhcCCCcCCeEEEECCCCcEEecCC
Confidence 999988 45666655544 3788999999999999999999999853
No 16
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.86 E-value=3.4e-21 Score=169.78 Aligned_cols=116 Identities=19% Similarity=0.312 Sum_probs=106.0
Q ss_pred ccCCcccee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHH---HHHHHhhcCCCeEEEEEeCCCChhHHHHH
Q 008336 335 VSGDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLID---AYKKIKERNESLEVVFISSDRDQTSFDEF 410 (569)
Q Consensus 335 ~~~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~---l~~~~~~~~~~~~vv~is~d~~~~~~~~~ 410 (569)
....|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|.+ ++++++++ ++.|++|++|.+.+.++++
T Consensus 4 G~~~p~f~l~~~~g~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~--~~~~v~v~~d~~~~~~~~~ 81 (142)
T 3ewl_A 4 GMKAADFTYVTVHGDNSRMSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENG--TLRVLAIYPDENREEWATK 81 (142)
T ss_dssp TSBCCCCEEECTTCCEEEGGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHT--SEEEEEEECSSCHHHHHHH
T ss_pred CCcCCCCEEECCCCCEEEhhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccC--CeEEEEEEecCCHHHHHHH
Confidence 345689988 99999999999999999999999999999999999998 99999875 6999999999999999999
Q ss_pred HhcCCCcccccCchhhHHHHH--hcCCCCccEEEEECCCCcEEEc
Q 008336 411 FKGMPWLALPFGDARKASLSR--KFKVSGIPMLVAIGPSGRTITK 453 (569)
Q Consensus 411 ~~~~~~~~~~~~~d~~~~l~~--~~~v~~~Pt~~lid~~G~i~~~ 453 (569)
+++++ +.+|...|....+.. .|+|.++|+++|||++|+|+.+
T Consensus 82 ~~~~~-~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 125 (142)
T 3ewl_A 82 AVYMP-QGWIVGWNKAGDIRTRQLYDIRATPTIYLLDGRKRVILK 125 (142)
T ss_dssp HTTSC-TTCEEEECTTCHHHHTTCSCCCSSSEEEEECTTCBEEEC
T ss_pred HHHcC-CCcceeeCCccchhhHHHcCCCCCCeEEEECCCCCEEec
Confidence 99988 578888888877776 8999999999999999999986
No 17
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.86 E-value=5.6e-21 Score=169.40 Aligned_cols=133 Identities=38% Similarity=0.764 Sum_probs=115.3
Q ss_pred cCCcc-cee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhc
Q 008336 336 SGDLD-FVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKG 413 (569)
Q Consensus 336 ~~~~~-f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~ 413 (569)
...|+ |.+ +.+| .+++++++||++||+||++||++|+.++|.|++++++++++ .++.|++|++|.+.+.+++|+++
T Consensus 6 ~~~P~~f~l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~-~~~~vv~v~~d~~~~~~~~~~~~ 83 (146)
T 1o8x_A 6 KYLPGIEKLRRGDG-EVEVKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHES-KNFEVVFCTWDEEEDGFAGYFAK 83 (146)
T ss_dssp GTSTTCCEEEETTE-EEEGGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCCSHHHHHHHHTT
T ss_pred hhCCCceEEEcCCC-CCcHHHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhc-CCeEEEEEeCCCCHHHHHHHHHH
Confidence 44577 877 9999 99999999999999999999999999999999999999842 26999999999999999999999
Q ss_pred CCCcccccCc-hhhHHHHHhcCCCCccEEEEEC-CCCcEEEccchhhHhhcC-CCCCCCC
Q 008336 414 MPWLALPFGD-ARKASLSRKFKVSGIPMLVAIG-PSGRTITKEARDMIAVHG-AEAYPFT 470 (569)
Q Consensus 414 ~~~~~~~~~~-d~~~~l~~~~~v~~~Pt~~lid-~~G~i~~~~~~~~~~~~g-~~~~p~~ 470 (569)
++|..+|+.. +....+++.|+|.++|+++||| ++|+++.++++..+.... ...+||.
T Consensus 84 ~~~~~~~~~~~d~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~~~~~~~~~~~~~~~~w~ 143 (146)
T 1o8x_A 84 MPWLAVPFAQSEAVQKLSKHFNVESIPTLIGVDADSGDVVTTRARATLVKDPEGEQFPWK 143 (146)
T ss_dssp CSSEECCGGGHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHTTCTTCTTTTCC
T ss_pred CCceeeccchhhHHHHHHHHhCCCCCCEEEEEECCCCeEEEecchhHHhhCCccccCCCC
Confidence 9999999886 6678899999999999999999 999999998776654332 3345554
No 18
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.85 E-value=1.6e-21 Score=172.32 Aligned_cols=119 Identities=13% Similarity=0.133 Sum_probs=101.4
Q ss_pred cccCccCCceecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHh
Q 008336 14 LLSSSARDFLIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSK 92 (569)
Q Consensus 14 ~~g~~~pdf~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~ 92 (569)
.+|.++|+|.++.+|+.+++++++|| +||+|||+||++|+.++|.|.+++++|++++ +.|++|++|.+.+.+++++++
T Consensus 8 ~~G~~~P~f~l~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~-~~vv~vs~d~~~~~~~~~~~~ 86 (143)
T 4fo5_A 8 NPGDLAPRIEFLGNDAKASFHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDK-IAMCSISMDEKESIFTETVKI 86 (143)
T ss_dssp STTSBCCCCCC-----CCCSCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTT-EEEEEEECCSCHHHHHHHHHH
T ss_pred CCcccCCceEEcCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCC-EEEEEEEccCCHHHHHHHHHH
Confidence 57999999955889999999999999 9999999999999999999999999998774 999999999999999999999
Q ss_pred CCCcc-cccCCchh-HHHHHHhcCCCCccEEEEECCCCcEEEc
Q 008336 93 MPWLA-VPFSDSET-RDKLDELFKVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 93 ~~~~~-~~~~~~~~-~~~l~~~~~v~~~P~~~lid~~G~i~~~ 133 (569)
++..+ ..+.+... ...+.+.|++.++|+++|||++|+|+.+
T Consensus 87 ~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 129 (143)
T 4fo5_A 87 DKLDLSTQFHEGLGKESELYKKYDLRKGFKNFLINDEGVIIAA 129 (143)
T ss_dssp HTCCGGGEEECTTGGGSHHHHHTTGGGCCCEEEECTTSBEEEE
T ss_pred hCCCCceeeecccccchHHHHHcCCCCCCcEEEECCCCEEEEc
Confidence 88877 44444322 3578999999999999999999999875
No 19
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.85 E-value=5.2e-21 Score=169.59 Aligned_cols=125 Identities=43% Similarity=0.815 Sum_probs=110.9
Q ss_pred cccCccCC-c-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHH
Q 008336 14 LLSSSARD-F-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYF 90 (569)
Q Consensus 14 ~~g~~~pd-f-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~ 90 (569)
.+|+.+|+ | +.+.+| .+++++++|| ++|+|||+||++|+.++|.|.++++++++..++.|++|++|.+.+.+++|+
T Consensus 3 ~~~~~~P~~f~l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~ 81 (146)
T 1o8x_A 3 GLDKYLPGIEKLRRGDG-EVEVKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYF 81 (146)
T ss_dssp CGGGTSTTCCEEEETTE-EEEGGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHH
T ss_pred chHhhCCCceEEEcCCC-CCcHHHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHH
Confidence 46889999 8 667899 9999999999 999999999999999999999999999853369999999999999999999
Q ss_pred HhCCCcccccCCchhHHHHHHhcCCCCccEEEEEC-CCCcEEEcCCccee
Q 008336 91 SKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILD-ENGKVLSDGGVEII 139 (569)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~l~~~~~v~~~P~~~lid-~~G~i~~~~~~~~~ 139 (569)
+++++..+++...+....+++.|+|.++|+++|+| ++|+++.+.+...+
T Consensus 82 ~~~~~~~~~~~~~d~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~~~~~~ 131 (146)
T 1o8x_A 82 AKMPWLAVPFAQSEAVQKLSKHFNVESIPTLIGVDADSGDVVTTRARATL 131 (146)
T ss_dssp TTCSSEECCGGGHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHH
T ss_pred HHCCceeeccchhhHHHHHHHHhCCCCCCEEEEEECCCCeEEEecchhHH
Confidence 99998777776545556899999999999999999 89999998765544
No 20
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.85 E-value=8e-21 Score=167.82 Aligned_cols=126 Identities=40% Similarity=0.786 Sum_probs=111.7
Q ss_pred ccccCccCCc--eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHH
Q 008336 13 SLLSSSARDF--LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGY 89 (569)
Q Consensus 13 ~~~g~~~pdf--~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~ 89 (569)
+-+|..+|+| +.+.+| .+++++++|| +||+||++||++|+.++|.|.+++++++...++.|++|++|.+.+.+++|
T Consensus 2 ~~~g~~~p~~~~l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~ 80 (144)
T 1o73_A 2 SGLAKYLPGATNLLSKSG-EVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDY 80 (144)
T ss_dssp CGGGGTSCTTCCBBCTTS-CBCSGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHH
T ss_pred cchhhhCccceEeecCCC-cCcHHHhCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHH
Confidence 3579999997 556899 9999999999 99999999999999999999999999984336999999999999999999
Q ss_pred HHhCCCcccccCCchhHHHHHHhcCCCCccEEEEEC-CCCcEEEcCCccee
Q 008336 90 FSKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILD-ENGKVLSDGGVEII 139 (569)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P~~~lid-~~G~i~~~~~~~~~ 139 (569)
++++++..+++...+....+.+.|++.++|+++++| ++|+++.+.+...+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~~~~~~ 131 (144)
T 1o73_A 81 YGKMPWLALPFDQRSTVSELGKTFGVESIPTLITINADTGAIIGTQARTRV 131 (144)
T ss_dssp HTTCSSEECCTTCHHHHHHHHHHHTCCSSSEEEEEETTTCCEEESCHHHHH
T ss_pred HHhCCceEeeccchhHHHHHHHHcCCCCCCEEEEEECCCCeEEecchhhHH
Confidence 999998888877655566899999999999999999 89999998766544
No 21
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.85 E-value=3.2e-21 Score=170.35 Aligned_cols=116 Identities=21% Similarity=0.168 Sum_probs=97.0
Q ss_pred cCCccceecCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCC
Q 008336 336 SGDLDFVVGKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMP 415 (569)
Q Consensus 336 ~~~~~f~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~ 415 (569)
...|+|.++.+|+.+++++++||++||+||++||++|+.++|.|.+++++++++ ++.|++|++|.+.+.+++++++++
T Consensus 11 ~~~P~f~l~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~--~~~vv~vs~d~~~~~~~~~~~~~~ 88 (143)
T 4fo5_A 11 DLAPRIEFLGNDAKASFHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPD--KIAMCSISMDEKESIFTETVKIDK 88 (143)
T ss_dssp SBCCCCCC-----CCCSCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTT--TEEEEEEECCSCHHHHHHHHHHHT
T ss_pred ccCCceEEcCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcC--CEEEEEEEccCCHHHHHHHHHHhC
Confidence 345889888899999999999999999999999999999999999999999865 699999999999899999998766
Q ss_pred Cccc-ccCch---hhHHHHHhcCCCCccEEEEECCCCcEEEcc
Q 008336 416 WLAL-PFGDA---RKASLSRKFKVSGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 416 ~~~~-~~~~d---~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~ 454 (569)
+.+ +...| ....+++.|+|.++|+++|||++|+|+.++
T Consensus 89 -~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 130 (143)
T 4fo5_A 89 -LDLSTQFHEGLGKESELYKKYDLRKGFKNFLINDEGVIIAAN 130 (143)
T ss_dssp -CCGGGEEECTTGGGSHHHHHTTGGGCCCEEEECTTSBEEEES
T ss_pred -CCCceeeecccccchHHHHHcCCCCCCcEEEECCCCEEEEcc
Confidence 333 33333 346799999999999999999999999985
No 22
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.85 E-value=1.8e-20 Score=165.49 Aligned_cols=133 Identities=38% Similarity=0.764 Sum_probs=114.6
Q ss_pred ccCCccc-ee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHh
Q 008336 335 VSGDLDF-VV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFK 412 (569)
Q Consensus 335 ~~~~~~f-~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~ 412 (569)
....|+| .+ +.+| .+++++++||++||+||++||++|+.++|.|.++++++++. .++.|++|++|.+.+.++++++
T Consensus 5 g~~~p~~~~l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~~vv~i~~d~~~~~~~~~~~ 82 (144)
T 1o73_A 5 AKYLPGATNLLSKSG-EVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVA-KNFEVVLISWDENESDFHDYYG 82 (144)
T ss_dssp GGTSCTTCCBBCTTS-CBCSGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCSSHHHHHHHHT
T ss_pred hhhCccceEeecCCC-cCcHHHhCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccC-CCEEEEEEeCCCCHHHHHHHHH
Confidence 3446887 66 9999 99999999999999999999999999999999999999732 2699999999999899999999
Q ss_pred cCCCcccccCc-hhhHHHHHhcCCCCccEEEEEC-CCCcEEEccchhhHhhcC-CCCCCC
Q 008336 413 GMPWLALPFGD-ARKASLSRKFKVSGIPMLVAIG-PSGRTITKEARDMIAVHG-AEAYPF 469 (569)
Q Consensus 413 ~~~~~~~~~~~-d~~~~l~~~~~v~~~Pt~~lid-~~G~i~~~~~~~~~~~~g-~~~~p~ 469 (569)
+++|..+|+.. +....+++.|+|.++|+++||| ++|+++.+.++..+.... ...|||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~~~~~~~~~~~~~~~~W 142 (144)
T 1o73_A 83 KMPWLALPFDQRSTVSELGKTFGVESIPTLITINADTGAIIGTQARTRVIEDPDGANFPW 142 (144)
T ss_dssp TCSSEECCTTCHHHHHHHHHHHTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTC
T ss_pred hCCceEeeccchhHHHHHHHHcCCCCCCEEEEEECCCCeEEecchhhHHhhCCCccCCCC
Confidence 99999999876 5677899999999999999999 899999998776654433 233444
No 23
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.84 E-value=1.3e-20 Score=168.00 Aligned_cols=140 Identities=24% Similarity=0.495 Sum_probs=116.6
Q ss_pred CCcccee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCC
Q 008336 337 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMP 415 (569)
Q Consensus 337 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~ 415 (569)
..|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|.+++++++++ ++.|+.|++|.+.+.+++|+++++
T Consensus 5 ~~p~~~l~~~~g~~~~l~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~--~v~vv~v~~d~~~~~~~~~~~~~~ 82 (151)
T 2f9s_A 5 DAPNFVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQ--GVEIVAVNVGESKIAVHNFMKSYG 82 (151)
T ss_dssp ECCCCEEECTTCCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG--TEEEEEEEESCCHHHHHHHHHHHT
T ss_pred cCCcceeEcCCCCEEEHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC--CeEEEEEECCCCHHHHHHHHHHcC
Confidence 3588988 9999999999999999999999999999999999999999999875 699999999988899999999887
Q ss_pred CcccccCchhhHHHHHhcCCCCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhhcCCCcccc
Q 008336 416 WLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWPENVK 493 (569)
Q Consensus 416 ~~~~~~~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~~~~~~~~~ 493 (569)
+.+|+..|....+++.|+|.++|+++|||++|+++.+..+. . ..++|.+.|++++++......
T Consensus 83 -~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~-----------~---~~~~l~~~l~~ll~~~~~~~~ 145 (151)
T 2f9s_A 83 -VNFPVVLDTDRQVLDAYDVSPLPTTFLINPEGKVVKVVTGT-----------M---TESMIHDYMNLIKPGETSGLE 145 (151)
T ss_dssp -CCSCEEEETTSHHHHHTTCCSSCEEEEECTTSEEEEEEESC-----------C---CHHHHHHHHHHHSCC------
T ss_pred -CCceEEECCchHHHHhcCCCCCCeEEEECCCCcEEEEEeCC-----------C---CHHHHHHHHHHHHhhhhcccc
Confidence 56888888888999999999999999999999999874321 1 235567777777765554433
No 24
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.84 E-value=2.1e-20 Score=166.52 Aligned_cols=120 Identities=20% Similarity=0.325 Sum_probs=108.1
Q ss_pred cccCccCCc-eecCCCceeecC--CCCCc-EEEEEecCCCHh--hHhhHHHHHHHHHHh-cCCCCEEEEEEeCCCCHHHH
Q 008336 14 LLSSSARDF-LIRSNGDQVKLD--SLKGK-IGLYFSASWCGP--CQRFTPILAEVYNEL-SRQGDFEVIFVSGDEDDEAF 86 (569)
Q Consensus 14 ~~g~~~pdf-~~~~~g~~v~l~--~~~gk-vlv~F~a~wC~~--C~~~~p~l~~~~~~~-~~~g~~~vv~v~~d~~~~~~ 86 (569)
.+|.++|+| +.+.+|+.++++ +++|| ++|+||++||++ |+.++|.|.+++++| ++++ +.+++|++|.+.+.+
T Consensus 6 ~~G~~~p~f~l~~~~g~~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~-~~~v~v~~d~~~~~~ 84 (150)
T 3fw2_A 6 EIGKYAPFFSLPNAKGEKITRSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKY-IGMLGISLDVDKQQW 84 (150)
T ss_dssp STTSBCCCCCEEBTTCCEECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSS-EEEEEEECCSCHHHH
T ss_pred cCCCcCCccEeECCCCCEEecchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCC-eEEEEEEcCCCHHHH
Confidence 479999999 667899999999 99999 999999999999 999999999999999 6664 999999999999999
Q ss_pred HHHHHhCCCcccccCCchh-HHHHHHhcCCCCccEEEEECCCCcEEEcC
Q 008336 87 KGYFSKMPWLAVPFSDSET-RDKLDELFKVMGIPHLVILDENGKVLSDG 134 (569)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~-~~~l~~~~~v~~~P~~~lid~~G~i~~~~ 134 (569)
++|+++++..+..+.+... ...+.+.|++.++|+++|||++|+|+...
T Consensus 85 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 133 (150)
T 3fw2_A 85 KDAIKRDTLDWEQVCDFGGLNSEVAKQYSIYKIPANILLSSDGKILAKN 133 (150)
T ss_dssp HHHHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEES
T ss_pred HHHHHHhCCCceEEEcCcccchHHHHHcCCCccCeEEEECCCCEEEEcc
Confidence 9999999987777766532 35789999999999999999999999753
No 25
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.84 E-value=8e-21 Score=171.44 Aligned_cols=138 Identities=20% Similarity=0.237 Sum_probs=119.1
Q ss_pred cCCcccee-cCCCCceecccCCCCE-EEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHh
Q 008336 336 SGDLDFVV-GKNGGKVPVSDLAGKT-ILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFK 412 (569)
Q Consensus 336 ~~~~~f~~-~~~g~~v~l~~~~gk~-vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~ 412 (569)
...|+|.+ +.+|+.+++++++||+ +||+|| ++||++|+.++|.|.+++++++++ ++.||+|++| +.+.+++|++
T Consensus 6 ~~~P~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~--~v~vv~vs~d-~~~~~~~~~~ 82 (161)
T 3drn_A 6 DKAPLFEGIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDY--DVVVIGVSSD-DINSHKRFKE 82 (161)
T ss_dssp SBCCCCEEEETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTT--CEEEEEEESC-CHHHHHHHHH
T ss_pred CcCCCeEeecCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHc--CCEEEEEeCC-CHHHHHHHHH
Confidence 34689988 9999999999999997 999999 999999999999999999999875 6999999998 5789999999
Q ss_pred cCCCcccccCchhhHHHHHhcCCCC----ccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhhcC
Q 008336 413 GMPWLALPFGDARKASLSRKFKVSG----IPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKG 487 (569)
Q Consensus 413 ~~~~~~~~~~~d~~~~l~~~~~v~~----~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~~~ 487 (569)
+++ +.+|++.|....+++.|++.+ +|+++|||++|+|+.+..+. ......++++.+.|+++..+
T Consensus 83 ~~~-~~~~~~~d~~~~~~~~~~v~~~~~~~P~~~lid~~G~i~~~~~g~----------~~~~~~~~~il~~l~~l~~~ 150 (161)
T 3drn_A 83 KYK-LPFILVSDPDKKIRELYGAKGFILPARITFVIDKKGIIRHIYNSQ----------MNPANHVNEALKALKQIKEE 150 (161)
T ss_dssp HTT-CCSEEEECTTSHHHHHTTCCCSSSCCCEEEEECTTSBEEEEEECS----------SCTTHHHHHHHHHHHHHHHH
T ss_pred HhC-CCceEEECCcHHHHHHcCCCCcCcccceEEEECCCCEEEEEEecC----------CCCCcCHHHHHHHHHHhhhh
Confidence 988 568888888899999999999 99999999999999885431 02346677787887776543
No 26
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.84 E-value=2e-20 Score=166.66 Aligned_cols=116 Identities=21% Similarity=0.322 Sum_probs=104.5
Q ss_pred cCCcccee-cCCCCceecc--cCCCCEEEEEEecCCChh--HHhhhHHHHHHHHHH-hhcCCCeEEEEEeCCCChhHHHH
Q 008336 336 SGDLDFVV-GKNGGKVPVS--DLAGKTILLYFSAHWCPP--CRAFLPKLIDAYKKI-KERNESLEVVFISSDRDQTSFDE 409 (569)
Q Consensus 336 ~~~~~f~~-~~~g~~v~l~--~~~gk~vll~F~a~wC~~--C~~~~~~l~~l~~~~-~~~~~~~~vv~is~d~~~~~~~~ 409 (569)
...|+|.+ +.+|+.++++ +++||++||+||++||++ |+.++|.|.++++++ +++ ++.|++|++|.+++.+++
T Consensus 9 ~~~p~f~l~~~~g~~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~--~~~~v~v~~d~~~~~~~~ 86 (150)
T 3fw2_A 9 KYAPFFSLPNAKGEKITRSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNK--YIGMLGISLDVDKQQWKD 86 (150)
T ss_dssp SBCCCCCEEBTTCCEECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCS--SEEEEEEECCSCHHHHHH
T ss_pred CcCCccEeECCCCCEEecchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCC--CeEEEEEEcCCCHHHHHH
Confidence 34689988 9999999999 999999999999999999 999999999999999 554 699999999999899999
Q ss_pred HHhcCCCcccccCchh---hHHHHHhcCCCCccEEEEECCCCcEEEcc
Q 008336 410 FFKGMPWLALPFGDAR---KASLSRKFKVSGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 410 ~~~~~~~~~~~~~~d~---~~~l~~~~~v~~~Pt~~lid~~G~i~~~~ 454 (569)
|+++++ +.+|.+.|. ...+++.|+|.++|+++|||++|+|+.+.
T Consensus 87 ~~~~~~-~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 133 (150)
T 3fw2_A 87 AIKRDT-LDWEQVCDFGGLNSEVAKQYSIYKIPANILLSSDGKILAKN 133 (150)
T ss_dssp HHHHTT-CCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEES
T ss_pred HHHHhC-CCceEEEcCcccchHHHHHcCCCccCeEEEECCCCEEEEcc
Confidence 999887 466666554 67899999999999999999999999984
No 27
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.84 E-value=3.6e-20 Score=165.16 Aligned_cols=137 Identities=25% Similarity=0.437 Sum_probs=118.3
Q ss_pred CCcccee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCC
Q 008336 337 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMP 415 (569)
Q Consensus 337 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~ 415 (569)
..|+|.+ + +|+.+++++++||++||+||++||++|+.++|.|.+++++++++ ++.|++|++|.+.+.+.+++++++
T Consensus 8 ~~P~f~l~~-~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~~ 84 (152)
T 3gl3_A 8 KAPDFALPG-KTGVVKLSDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAK--GFQVVAVNLDAKTGDAMKFLAQVP 84 (152)
T ss_dssp BCCCCEEEB-SSSEEEGGGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGG--TEEEEEEECCSSHHHHHHHHHHSC
T ss_pred cCCceEeeC-CCCeEeHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcC--CeEEEEEECCCCHHHHHHHHHHcC
Confidence 4589988 7 99999999999999999999999999999999999999999876 699999999999899999999988
Q ss_pred CcccccCchhhHHHHHhcCCCCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhhcCCC
Q 008336 416 WLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWP 489 (569)
Q Consensus 416 ~~~~~~~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~~~~~ 489 (569)
+.+++..|....+++.|++.++|+++|||++|+++.+..+ ....+.++|.+.|++++.+.+
T Consensus 85 -~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g------------~~~~~~~~l~~~i~~~~~~~~ 145 (152)
T 3gl3_A 85 -AEFTVAFDPKGQTPRLYGVKGMPTSFLIDRNGKVLLQHVG------------FRPADKEALEQQILAALGGNE 145 (152)
T ss_dssp -CCSEEEECTTCHHHHHTTCCSSSEEEEECTTSBEEEEEES------------CCTTTHHHHHHHHHHHTC---
T ss_pred -CCCceeECCcchhHHHcCCCCCCeEEEECCCCCEEEEEcc------------CCCcCHHHHHHHHHHHHcccc
Confidence 5788888888899999999999999999999999998432 233455677777877765544
No 28
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.83 E-value=2e-20 Score=167.28 Aligned_cols=145 Identities=24% Similarity=0.446 Sum_probs=115.0
Q ss_pred ccCCcccee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCC-hhHHHHHHh
Q 008336 335 VSGDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRD-QTSFDEFFK 412 (569)
Q Consensus 335 ~~~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~-~~~~~~~~~ 412 (569)
....|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|.++++++++. ++.|++|++|.+ .+.+++|++
T Consensus 5 G~~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~ 82 (154)
T 3kcm_A 5 ENPAPDFTLNTLNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGK--PFRMLCVSIDEGGKVAVEEFFR 82 (154)
T ss_dssp TSBCCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTS--SEEEEEEECCTTHHHHHHHHHH
T ss_pred CCCCCCeEEEcCCCCEEehhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC--CeEEEEEEcCCcchHHHHHHHH
Confidence 345689988 9999999999999999999999999999999999999999999864 699999999987 788899998
Q ss_pred cCCCcccccCchhhHHHHHhcCCCCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhhcCCCccc
Q 008336 413 GMPWLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWPENV 492 (569)
Q Consensus 413 ~~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~~~~~~~~ 492 (569)
.++ +.+|+..|....+++.|++.++|+++|||++|+++.+..+. .....+++.+.|+++....+...
T Consensus 83 ~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~------------~~~~~~~l~~~l~~l~~~~~~~~ 149 (154)
T 3kcm_A 83 KTG-FTLPVLLDADKRVGKLYGTTGVPETFVIDRHGVILKKVVGA------------MEWDHPEVIAFLNNELSKAREGH 149 (154)
T ss_dssp HHC-CCCCEEECTTCHHHHHHTCCSBCEEEEECTTSBEEEEEESC------------CCTTSHHHHHHHHTC--------
T ss_pred HcC-CCeeEEecCchHHHHHhCCCCCCeEEEECCCCcEEEEEcCC------------CccccHHHHHHHHHHHHHhhhcc
Confidence 887 56888888888999999999999999999999999984321 11123456666777666555444
Q ss_pred cc
Q 008336 493 KH 494 (569)
Q Consensus 493 ~~ 494 (569)
++
T Consensus 150 ~~ 151 (154)
T 3kcm_A 150 HH 151 (154)
T ss_dssp --
T ss_pred cc
Confidence 33
No 29
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.83 E-value=2.7e-20 Score=167.24 Aligned_cols=135 Identities=16% Similarity=0.282 Sum_probs=112.4
Q ss_pred CCcccee-c--CCCCceecccCCCCEEEEEEecCCChhHHhh-hHHHHHHHHHHhhcCCCeEEEEEeCC------CChhH
Q 008336 337 GDLDFVV-G--KNGGKVPVSDLAGKTILLYFSAHWCPPCRAF-LPKLIDAYKKIKERNESLEVVFISSD------RDQTS 406 (569)
Q Consensus 337 ~~~~f~~-~--~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~-~~~l~~l~~~~~~~~~~~~vv~is~d------~~~~~ 406 (569)
..|+|.+ + .+|+.+++++++||++||+||++||++|+.+ +|.|.+++++++++ ++.|++|++| .+.+.
T Consensus 5 ~aP~f~l~~~~~~g~~~~l~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~--~v~~v~v~~~~~~~~~~~~~~ 82 (158)
T 3eyt_A 5 KAPELQIQQWFNSATDLTLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPED--KVAVLGLHTVFEHHEAMTPIS 82 (158)
T ss_dssp ECCCCCEEEEESCSSCCCTGGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT--TEEEEEEECCCSCGGGSCHHH
T ss_pred cCCCceehhhhcCCCccCHHHhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcC--CEEEEEEEecccccccCCHHH
Confidence 3588987 6 4889999999999999999999999999996 99999999999865 6999999984 57789
Q ss_pred HHHHHhcCCCcccccCchhhH-----HHHHhcCCCCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHh
Q 008336 407 FDEFFKGMPWLALPFGDARKA-----SLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQY 481 (569)
Q Consensus 407 ~~~~~~~~~~~~~~~~~d~~~-----~l~~~~~v~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l 481 (569)
+++|+++++ +.+|+..|... .+++.|+|.++|+++|||++|+++.+..+. .. .++|.+.|
T Consensus 83 ~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~-----------~~---~~~l~~~i 147 (158)
T 3eyt_A 83 LKAFLHEYR-IKFPVGVDQPGDGAMPRTMAAYQMRGTPSLLLIDKAGDLRAHHFGD-----------VS---ELLLGAEI 147 (158)
T ss_dssp HHHHHHHTT-CCSCEEEECCCSSSSCHHHHHTTCCSSSEEEEECTTSEEEEEEESC-----------CC---HHHHHHHH
T ss_pred HHHHHHHcC-CCceEEEcCccchhhHHHHHHcCCCCCCEEEEECCCCCEEEEEeCC-----------CC---HHHHHHHH
Confidence 999999887 56777777665 699999999999999999999999985321 22 24567777
Q ss_pred hhhhcCC
Q 008336 482 NEMAKGW 488 (569)
Q Consensus 482 ~~l~~~~ 488 (569)
++++++.
T Consensus 148 ~~ll~~~ 154 (158)
T 3eyt_A 148 ATLLGEA 154 (158)
T ss_dssp HHHHTSC
T ss_pred HHHhccC
Confidence 7777644
No 30
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.83 E-value=1.9e-20 Score=168.54 Aligned_cols=137 Identities=16% Similarity=0.247 Sum_probs=114.8
Q ss_pred ccCCcccee-c-CCCCceecccCCCCEEEEEEecCCChhHHhh-hHHHHHHHHHHhhcCCCeEEEEEeCC------CChh
Q 008336 335 VSGDLDFVV-G-KNGGKVPVSDLAGKTILLYFSAHWCPPCRAF-LPKLIDAYKKIKERNESLEVVFISSD------RDQT 405 (569)
Q Consensus 335 ~~~~~~f~~-~-~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~-~~~l~~l~~~~~~~~~~~~vv~is~d------~~~~ 405 (569)
....|+|.+ + .+|+.+++++++||++||+||++||++|+.+ +|.|.+++++++++ ++.|++|++| .+.+
T Consensus 6 g~~~p~~~~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~--~v~~v~v~~~~~~~~~~~~~ 83 (160)
T 3lor_A 6 NAPLLELDVQEWVNHEGLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDES--QVQVIGLHSVFEHHDVMTPE 83 (160)
T ss_dssp TCCBCCCCEEEESSSCCCCHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT--TEEEEEEECCCSCGGGSCHH
T ss_pred CCcCCCcccccccCCCccCHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcC--CcEEEEEeccccccccCCHH
Confidence 445688877 6 7999999999999999999999999999995 99999999999865 6999999984 6788
Q ss_pred HHHHHHhcCCCcccccCchhhHH------HHHhcCCCCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHH
Q 008336 406 SFDEFFKGMPWLALPFGDARKAS------LSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDG 479 (569)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~d~~~~------l~~~~~v~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~ 479 (569)
.+++|+++++ +.+|+..|.... +++.|+|.++|+++|||++|+++.+..+. .. .++|.+
T Consensus 84 ~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~-----------~~---~~~l~~ 148 (160)
T 3lor_A 84 ALKVFIDEFG-IKFPVAVDMPREGQRIPSTMKKYRLEGTPSIILADRKGRIRQVQFGQ-----------VD---DFVLGL 148 (160)
T ss_dssp HHHHHHHHTT-CCSCEEEECCCTTCSSCHHHHHTTCCSSSEEEEECTTSBEEEEEESC-----------CC---HHHHHH
T ss_pred HHHHHHHHcC-CCCcEEECCccccchhhhHHHhcccCccceEEEECCCCcEEEEecCc-----------CC---HHHHHH
Confidence 9999999988 568877777766 99999999999999999999999984321 12 245677
Q ss_pred HhhhhhcCC
Q 008336 480 QYNEMAKGW 488 (569)
Q Consensus 480 ~l~~l~~~~ 488 (569)
.|++++++.
T Consensus 149 ~i~~ll~~~ 157 (160)
T 3lor_A 149 LLGSLLSET 157 (160)
T ss_dssp HHHHHHTCC
T ss_pred HHHHHHhcc
Confidence 777777643
No 31
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.83 E-value=7.1e-20 Score=162.26 Aligned_cols=119 Identities=23% Similarity=0.381 Sum_probs=107.6
Q ss_pred cccCccCCc-eecCCCceeecC--CCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHh-cCCCCEEEEEEeCCCCHHHHHH
Q 008336 14 LLSSSARDF-LIRSNGDQVKLD--SLKGK-IGLYFSASWCGPCQRFTPILAEVYNEL-SRQGDFEVIFVSGDEDDEAFKG 88 (569)
Q Consensus 14 ~~g~~~pdf-~~~~~g~~v~l~--~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~-~~~g~~~vv~v~~d~~~~~~~~ 88 (569)
.+|.++|+| +.+.+|+.++++ +++|| +||+||++||++|+.++|.|.++++++ .+.+ +.+++|++|.+.+.+++
T Consensus 6 ~~g~~~p~~~l~~~~g~~~~l~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~-~~~v~v~~d~~~~~~~~ 84 (148)
T 3fkf_A 6 TVGKSAPYFSLPNEKGEKLSRSAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKN-FAMLGISLDIDREAWET 84 (148)
T ss_dssp CTTSBCCCCCEEBTTSCEECTTSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTT-EEEEEEECCSCHHHHHH
T ss_pred cCCCcCCCeEeeCCCCCEEeccccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCC-eEEEEEECCCCHHHHHH
Confidence 579999999 667899999999 99999 999999999999999999999999999 6664 99999999999999999
Q ss_pred HHHhCCCcccccCCchh-HHHHHHhcCCCCccEEEEECCCCcEEEc
Q 008336 89 YFSKMPWLAVPFSDSET-RDKLDELFKVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 89 ~~~~~~~~~~~~~~~~~-~~~l~~~~~v~~~P~~~lid~~G~i~~~ 133 (569)
++++++..+..+.+... ...+++.|++.++|+++++|++|+++..
T Consensus 85 ~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 130 (148)
T 3fkf_A 85 AIKKDTLSWDQVCDFTGLSSETAKQYAILTLPTNILLSPTGKILAR 130 (148)
T ss_dssp HHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEE
T ss_pred HHHHcCCCceEEEccCCcchHHHHhcCCCCcCEEEEECCCCeEEEe
Confidence 99999987777766532 4578999999999999999999999875
No 32
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.83 E-value=1.9e-20 Score=165.95 Aligned_cols=134 Identities=17% Similarity=0.259 Sum_probs=115.9
Q ss_pred cCCcccee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcC
Q 008336 336 SGDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGM 414 (569)
Q Consensus 336 ~~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~ 414 (569)
...|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|.+++++++++ ++.|++|++|.+.+.+++|++++
T Consensus 9 ~~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~ 86 (148)
T 3hcz_A 9 KKAPNLYMTDTTGTYRYLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAK--GIQVYAANIERKDEEWLKFIRSK 86 (148)
T ss_dssp SBCCCCCCBCTTSCBCCGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGG--TEEEEEEECCSSSHHHHHHHHHH
T ss_pred CcCCceEEecCCCCEEEhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC--CEEEEEEEecCCHHHHHHHHHHc
Confidence 34689988 9999999999999999999999999999999999999999999876 69999999998888999999998
Q ss_pred CCcccccCchhhHH--HHHhcCCCCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhh
Q 008336 415 PWLALPFGDARKAS--LSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMA 485 (569)
Q Consensus 415 ~~~~~~~~~d~~~~--l~~~~~v~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~ 485 (569)
++..++...|.... +++.|++.++|+++|||++|+++.+.. ....++++.+.+.+++
T Consensus 87 ~~~~~~~~~d~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~--------------g~~~~~~~l~~l~~~l 145 (148)
T 3hcz_A 87 KIGGWLNVRDSKNHTDFKITYDIYATPVLYVLDKNKVIIAKRI--------------GYENLDDFLVQYEKSL 145 (148)
T ss_dssp TCTTSEEEECTTCCCCHHHHHCCCSSCEEEEECTTCBEEEESC--------------CGGGHHHHHHHHHHHH
T ss_pred CCCCceEEeccccchhHHHhcCcCCCCEEEEECCCCcEEEecC--------------CHHHHHHHHHHHHHHh
Confidence 86558877777766 999999999999999999999999842 2245566666665554
No 33
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.83 E-value=3.2e-20 Score=165.48 Aligned_cols=136 Identities=19% Similarity=0.319 Sum_probs=107.8
Q ss_pred CccceecCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCc
Q 008336 338 DLDFVVGKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWL 417 (569)
Q Consensus 338 ~~~f~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~ 417 (569)
+++|....+|+.+++++++||++||+||++||++|+.++|.|.+++++++++ ++.|++|++|. .+.+++|+++++ +
T Consensus 5 a~~~~~~~~G~~~~l~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~--~v~vv~v~~d~-~~~~~~~~~~~~-~ 80 (151)
T 3raz_A 5 ADELAGWKDNTPQSLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKG--SVDMVGIALDT-SDNIGNFLKQTP-V 80 (151)
T ss_dssp --CEEETTTCCEECGGGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTT--TEEEEEEESSC-HHHHHHHHHHSC-C
T ss_pred cchhhcccCCCEecHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC--CeEEEEEECCC-hHHHHHHHHHcC-C
Confidence 3566656899999999999999999999999999999999999999999654 69999999984 578899999887 5
Q ss_pred ccccCch---hhHHHHHhcC--CCCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhhcCCCcc
Q 008336 418 ALPFGDA---RKASLSRKFK--VSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWPEN 491 (569)
Q Consensus 418 ~~~~~~d---~~~~l~~~~~--v~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~~~~~~~ 491 (569)
.+|...+ ....+++.|+ +.++|+++|||++|+++.+..+. .. .++|.+.|+++.++.+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~-----------~~---~~~l~~~l~~l~~~~~~~ 145 (151)
T 3raz_A 81 SYPIWRYTGANSRNFMKTYGNTVGVLPFTVVEAPKCGYRQTITGE-----------VN---EKSLTDAVKLAHSKCREG 145 (151)
T ss_dssp SSCEEEECCSCHHHHHHTTTCCSCCSSEEEEEETTTTEEEECCSC-----------CC---HHHHHHHHHHHHTC----
T ss_pred CCceEecCccchHHHHHHhCCccCCCCEEEEECCCCcEEEEECCC-----------CC---HHHHHHHHHHHHHHhhcc
Confidence 6666543 4567899999 99999999999999999884321 22 355677777777665543
No 34
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.83 E-value=3.3e-20 Score=165.64 Aligned_cols=119 Identities=26% Similarity=0.420 Sum_probs=106.7
Q ss_pred cccCccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHH
Q 008336 14 LLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFS 91 (569)
Q Consensus 14 ~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~ 91 (569)
.+|.++|+| +.+.+|+.+++++++|| ++|+||++||++|+.++|.|.++++++++++ +.|++|++|.+.+.+++|++
T Consensus 4 ~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~-~~vv~v~~d~~~~~~~~~~~ 82 (152)
T 2lrn_A 4 ATGSVAPAITGIDLKGNSVSLNDFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKG-FTIYGVSTDRREEDWKKAIE 82 (152)
T ss_dssp CTTEECCCCEEECSSSCEEESGGGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTT-EEEEEEECCSCHHHHHHHHH
T ss_pred cCCCcCCCceeEcCCCCEEeHHHcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCC-eEEEEEEccCCHHHHHHHHH
Confidence 479999999 56789999999999999 9999999999999999999999999998764 99999999999999999999
Q ss_pred hCCCcccccCCchh-HHHHHHhcCCCCccEEEEECCCCcEEEc
Q 008336 92 KMPWLAVPFSDSET-RDKLDELFKVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 92 ~~~~~~~~~~~~~~-~~~l~~~~~v~~~P~~~lid~~G~i~~~ 133 (569)
+++..+..+.+... ...+.+.|++.++|+++|+|++|+++..
T Consensus 83 ~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 125 (152)
T 2lrn_A 83 EDKSYWNQVLLQKDDVKDVLESYCIVGFPHIILVDPEGKIVAK 125 (152)
T ss_dssp HHTCCSEEEEECHHHHHHHHHHTTCCSSCEEEEECTTSEEEEE
T ss_pred HhCCCCeEEecccchhHHHHHHhCCCcCCeEEEECCCCeEEEe
Confidence 98877666655432 3578999999999999999999999875
No 35
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.83 E-value=3.9e-21 Score=172.57 Aligned_cols=136 Identities=23% Similarity=0.256 Sum_probs=108.9
Q ss_pred cCCcccee-cCCCCceecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhc
Q 008336 336 SGDLDFVV-GKNGGKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKG 413 (569)
Q Consensus 336 ~~~~~f~~-~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~ 413 (569)
...|+|.+ +.+|++++|++++||+++|+|| ++||++|+.++|.|++++++++.. ++.+++||.| +++..++|.++
T Consensus 8 ~~aPdF~l~~~~G~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~--~~~~v~vs~d-~~~~~~~~~~~ 84 (157)
T 4g2e_A 8 ELAPDFELPDTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQV--NAVVLGISVD-PPFSNKAFKEH 84 (157)
T ss_dssp SBCCCCEEEBTTSCEEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGC--SSEEEEEESS-CHHHHHHHHHH
T ss_pred CCCcCeEeECCCCCEEeHHHHCCCeEEEEecCCCCCCccccchhhccccccccccc--CceEeeeccc-chhHHHHHHHH
Confidence 34699988 9999999999999999999999 999999999999999999999876 7999999998 45778899988
Q ss_pred CCCcccccCchhhHHHHHhcCCC-----------CccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhh
Q 008336 414 MPWLALPFGDARKASLSRKFKVS-----------GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYN 482 (569)
Q Consensus 414 ~~~~~~~~~~d~~~~l~~~~~v~-----------~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~ 482 (569)
++ +.+|++.|.++++++.|||. ..|++||||++|+|++++.+.. +..+..++++++.|+
T Consensus 85 ~~-~~~p~l~D~~~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~---------~~~~~~~~eil~~l~ 154 (157)
T 4g2e_A 85 NK-LNFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDD---------PTKEPPYDEIEKVVK 154 (157)
T ss_dssp TT-CCSEEEECTTSHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEEEEESS---------TTCCCCHHHHHHHHH
T ss_pred cC-CcEEEEEcCCcHHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEEEECCC---------CCCCCCHHHHHHHHH
Confidence 87 68999999999999999984 4689999999999998854321 233445677777776
Q ss_pred hh
Q 008336 483 EM 484 (569)
Q Consensus 483 ~l 484 (569)
.|
T Consensus 155 ~L 156 (157)
T 4g2e_A 155 SL 156 (157)
T ss_dssp HT
T ss_pred Hh
Confidence 55
No 36
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.83 E-value=4.8e-20 Score=163.35 Aligned_cols=130 Identities=20% Similarity=0.376 Sum_probs=111.6
Q ss_pred CCcccee-cCCCCceecc--cCCCCEEEEEEecCCChhHHhhhHHHHHHHHHH-hhcCCCeEEEEEeCCCChhHHHHHHh
Q 008336 337 GDLDFVV-GKNGGKVPVS--DLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKI-KERNESLEVVFISSDRDQTSFDEFFK 412 (569)
Q Consensus 337 ~~~~f~~-~~~g~~v~l~--~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~-~~~~~~~~vv~is~d~~~~~~~~~~~ 412 (569)
..|+|.+ +.+|+.++++ +++||++||+||++||++|+.++|.|.++++++ +++ ++.|++|++|.+.+.++++++
T Consensus 10 ~~p~~~l~~~~g~~~~l~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~--~~~~v~v~~d~~~~~~~~~~~ 87 (148)
T 3fkf_A 10 SAPYFSLPNEKGEKLSRSAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNK--NFAMLGISLDIDREAWETAIK 87 (148)
T ss_dssp BCCCCCEEBTTSCEECTTSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCT--TEEEEEEECCSCHHHHHHHHH
T ss_pred cCCCeEeeCCCCCEEeccccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCC--CeEEEEEECCCCHHHHHHHHH
Confidence 4589988 9999999999 999999999999999999999999999999999 654 699999999999899999999
Q ss_pred cCCCcccccCchh---hHHHHHhcCCCCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhhc
Q 008336 413 GMPWLALPFGDAR---KASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAK 486 (569)
Q Consensus 413 ~~~~~~~~~~~d~---~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~~ 486 (569)
.++ +.+|...+. ...+++.|++.++|+++|||++|+++.+.. ..++|.+.|+++++
T Consensus 88 ~~~-~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~-----------------~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 88 KDT-LSWDQVCDFTGLSSETAKQYAILTLPTNILLSPTGKILARDI-----------------QGEALTGKLKELLK 146 (148)
T ss_dssp HTT-CCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEESC-----------------CHHHHHHHHHHHC-
T ss_pred HcC-CCceEEEccCCcchHHHHhcCCCCcCEEEEECCCCeEEEecC-----------------CHHHHHHHHHHHHc
Confidence 887 466666555 678999999999999999999999999842 23556666766654
No 37
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.83 E-value=4.6e-20 Score=164.73 Aligned_cols=114 Identities=18% Similarity=0.269 Sum_probs=101.4
Q ss_pred cCCcccee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcC
Q 008336 336 SGDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGM 414 (569)
Q Consensus 336 ~~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~ 414 (569)
...|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|.+++++++++ ++.|++|++|...+.++++...+
T Consensus 13 ~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~--~~~vv~i~~d~~~~~~~~~~~~~ 90 (152)
T 2lrt_A 13 ASIIDIQLKDLKGNTRSLTDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQ--GFEIYQISLDGDEHFWKTSADNL 90 (152)
T ss_dssp TCSCCCCEEBTTSCEECTTTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG--TEEEEEEECSCCHHHHHHHHTTC
T ss_pred CCCCCeEEEcCCCCEEeHHHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccC--CeEEEEEEccCCHHHHHHHHhCC
Confidence 34689988 9999999999999999999999999999999999999999999876 69999999999988888888765
Q ss_pred CCcccccCchhhHH---HHHhcCCCCccEEEEECCCCcEEEcc
Q 008336 415 PWLALPFGDARKAS---LSRKFKVSGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 415 ~~~~~~~~~d~~~~---l~~~~~v~~~Pt~~lid~~G~i~~~~ 454 (569)
+ +|++.|.... +.+.|++.++|+++|||++|+|+.+.
T Consensus 91 ~---~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 130 (152)
T 2lrt_A 91 P---WVCVRDANGAYSSYISLYNVTNLPSVFLVNRNNELSARG 130 (152)
T ss_dssp S---SEEEECSSGGGCHHHHHHTCCSCSEEEEEETTTEEEEET
T ss_pred C---ceEEECCCCcchHHHHHcCcccCceEEEECCCCeEEEec
Confidence 4 4555555554 99999999999999999999999984
No 38
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.83 E-value=2.4e-20 Score=177.07 Aligned_cols=146 Identities=16% Similarity=0.230 Sum_probs=120.1
Q ss_pred cCCcccee-cCCCCceecccCCCC-EEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC-------CChhH
Q 008336 336 SGDLDFVV-GKNGGKVPVSDLAGK-TILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSD-------RDQTS 406 (569)
Q Consensus 336 ~~~~~f~~-~~~g~~v~l~~~~gk-~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d-------~~~~~ 406 (569)
...|+|.+ +.+|+.+++++++|| ++||+||++||++|+.++|.|++++++++++ ++.||+|++| .+.+.
T Consensus 36 ~~aP~f~l~~~~G~~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~Vs~d~~~~~~~d~~~~ 113 (218)
T 3u5r_E 36 TRAADFVLPDAGGNLFTLAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQ--GLAVVAINSNDAQAFPEETLER 113 (218)
T ss_dssp CBCCCCCEECTTCCEECGGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTT--TEEEEEEECSCTTTCGGGSHHH
T ss_pred CcCCCcEeECCCCCEEeHHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhC--CcEEEEEECCcccccccCCHHH
Confidence 34589988 999999999999999 5999999999999999999999999999875 6999999997 67788
Q ss_pred HHHHHhcCCCcccccCchhhHHHHHhcCCCCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhhc
Q 008336 407 FDEFFKGMPWLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAK 486 (569)
Q Consensus 407 ~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~~ 486 (569)
+++|+++++ +.+|++.|....+++.|+|.++|+++|||++|+|+++...+... .+ . ......++|.+.|+++++
T Consensus 114 ~~~~~~~~~-~~~~~l~D~~~~~~~~~~v~~~P~~~liD~~G~i~~~g~~d~~~-~~-~---~~~~~~~~l~~~i~~ll~ 187 (218)
T 3u5r_E 114 VGAEVKAYG-YGFPYLKDASQSVAKAYGAACTPDFFLYDRERRLVYHGQFDDAR-PG-N---GKDVTGADLRAAVDAVLK 187 (218)
T ss_dssp HHHHHHHHT-CCSCEEECTTCHHHHHHTCCEESEEEEECTTCBEEEEECSSSCC-TT-S---CCCCCCHHHHHHHHHHHT
T ss_pred HHHHHHHhC-CCccEEECCccHHHHHcCCCCCCeEEEECCCCcEEEeccccccc-cc-c---ccccCHHHHHHHHHHHHc
Confidence 999999887 68898888888999999999999999999999999875322110 00 0 011223567778888887
Q ss_pred CCC
Q 008336 487 GWP 489 (569)
Q Consensus 487 ~~~ 489 (569)
+.+
T Consensus 188 ~~~ 190 (218)
T 3u5r_E 188 GKD 190 (218)
T ss_dssp TCC
T ss_pred CCC
Confidence 655
No 39
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.82 E-value=9.1e-20 Score=164.88 Aligned_cols=141 Identities=22% Similarity=0.364 Sum_probs=112.4
Q ss_pred cCCcccee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcC
Q 008336 336 SGDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGM 414 (569)
Q Consensus 336 ~~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~ 414 (569)
...|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|.+++++++++ ++.++.|++|.+.+.+++|++++
T Consensus 12 ~~~p~~~l~~~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~--~v~~v~v~~d~~~~~~~~~~~~~ 89 (165)
T 3or5_A 12 TPAPSFSGVTVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASR--GFTFVGIAVNEQLPNVKNYMKTQ 89 (165)
T ss_dssp CBCCCCEEECTTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT--TEEEEEEECSCCHHHHHHHHHHH
T ss_pred CCCCCceeeCCCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC--CeEEEEEECCCCHHHHHHHHHHc
Confidence 34589988 9999999999999999999999999999999999999999999865 69999999999899999999887
Q ss_pred CCcccccCchhhHHHHHhc------CCCCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhhcCC
Q 008336 415 PWLALPFGDARKASLSRKF------KVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGW 488 (569)
Q Consensus 415 ~~~~~~~~~d~~~~l~~~~------~v~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~~~~ 488 (569)
+ +.+|+..+.. .+.+.| ++.++|+++|||++|+++.+..+. . ..+++.+.|++++++.
T Consensus 90 ~-~~~~~~~~~~-~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~-----------~---~~~~l~~~l~~~l~~~ 153 (165)
T 3or5_A 90 G-IIYPVMMATP-ELIRAFNGYIDGGITGIPTSFVIDASGNVSGVIVGP-----------R---SKADFDRIVKMALGAK 153 (165)
T ss_dssp T-CCSCEEECCH-HHHHHHHTTSTTCSCSSSEEEEECTTSBEEEEECSC-----------C---CHHHHHHHHHHHHC--
T ss_pred C-CCCceEecCH-HHHHHHhhhhccCCCCCCeEEEECCCCcEEEEEcCC-----------C---CHHHHHHHHHHHHhhh
Confidence 7 5667666654 677777 899999999999999999874221 1 2355677777777655
Q ss_pred Cccccc
Q 008336 489 PENVKH 494 (569)
Q Consensus 489 ~~~~~~ 494 (569)
......
T Consensus 154 ~~~~~~ 159 (165)
T 3or5_A 154 AATKEG 159 (165)
T ss_dssp ------
T ss_pred cccccc
Confidence 444433
No 40
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.82 E-value=3e-19 Score=161.05 Aligned_cols=116 Identities=26% Similarity=0.320 Sum_probs=104.9
Q ss_pred cccCccCCc-eecCCCceeecCCCCCc--EEEEEe-cCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHH
Q 008336 14 LLSSSARDF-LIRSNGDQVKLDSLKGK--IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGY 89 (569)
Q Consensus 14 ~~g~~~pdf-~~~~~g~~v~l~~~~gk--vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~ 89 (569)
.+|.++|+| +.+.+|+.+++++++|| ++|+|| ++||++|+.++|.|.+++++|++.+ +.|++|++| +.+.+++|
T Consensus 3 ~~G~~~P~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~-v~vv~vs~d-~~~~~~~~ 80 (161)
T 3drn_A 3 KVGDKAPLFEGIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYD-VVVIGVSSD-DINSHKRF 80 (161)
T ss_dssp CTTSBCCCCEEEETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTC-EEEEEEESC-CHHHHHHH
T ss_pred CCCCcCCCeEeecCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcC-CEEEEEeCC-CHHHHHHH
Confidence 369999999 66789999999999999 899999 9999999999999999999999875 999999998 68899999
Q ss_pred HHhCCCcccccCCchhHHHHHHhcCCCC----ccEEEEECCCCcEEEc
Q 008336 90 FSKMPWLAVPFSDSETRDKLDELFKVMG----IPHLVILDENGKVLSD 133 (569)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~l~~~~~v~~----~P~~~lid~~G~i~~~ 133 (569)
++++++.+..+.+.. ..+.+.|++.+ +|+++|||++|+|+..
T Consensus 81 ~~~~~~~~~~~~d~~--~~~~~~~~v~~~~~~~P~~~lid~~G~i~~~ 126 (161)
T 3drn_A 81 KEKYKLPFILVSDPD--KKIRELYGAKGFILPARITFVIDKKGIIRHI 126 (161)
T ss_dssp HHHTTCCSEEEECTT--SHHHHHTTCCCSSSCCCEEEEECTTSBEEEE
T ss_pred HHHhCCCceEEECCc--HHHHHHcCCCCcCcccceEEEECCCCEEEEE
Confidence 999998877666644 47899999999 9999999999999874
No 41
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.82 E-value=6.1e-20 Score=165.88 Aligned_cols=136 Identities=16% Similarity=0.198 Sum_probs=117.5
Q ss_pred cCCccce--e-cCCCCceecccCCCCEEEEEEec-CCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHH
Q 008336 336 SGDLDFV--V-GKNGGKVPVSDLAGKTILLYFSA-HWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFF 411 (569)
Q Consensus 336 ~~~~~f~--~-~~~g~~v~l~~~~gk~vll~F~a-~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~ 411 (569)
...|+|. + +.+|+++++++++||++||+||+ +||++|+.++|.|++++++++++ ++.||+|++| +++.+++|+
T Consensus 11 ~~~P~f~~~l~~~~G~~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~--~~~vv~vs~d-~~~~~~~~~ 87 (163)
T 3gkn_A 11 LPAATFDLPLSLSGGTQTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKA--GAKILGVSRD-SVKSHDNFC 87 (163)
T ss_dssp CCGGGGGCCEECSTTCEECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHT--TCEEEEEESS-CHHHHHHHH
T ss_pred CcCCCccccccCCCCCEEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHC--CCEEEEEeCC-CHHHHHHHH
Confidence 4468999 8 99999999999999999999997 99999999999999999999876 6999999998 778899999
Q ss_pred hcCCCcccccCchhhHHHHHhcCCCC------------ccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHH
Q 008336 412 KGMPWLALPFGDARKASLSRKFKVSG------------IPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDG 479 (569)
Q Consensus 412 ~~~~~~~~~~~~d~~~~l~~~~~v~~------------~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~ 479 (569)
++++ +.+|++.|....+++.|++.. +|++||||++|+|++... + ......++++.+
T Consensus 88 ~~~~-~~~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~-------~----~~~~~~~~~il~ 155 (163)
T 3gkn_A 88 AKQG-FAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWR-------K----VKVAGHADAVLA 155 (163)
T ss_dssp HHHC-CSSCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEEC-------S----CCSTTHHHHHHH
T ss_pred HHhC-CCceEEECCcHHHHHHhCCccccccccccccCcceEEEEECCCCeEEEEEc-------C----CCcccCHHHHHH
Confidence 9887 678888888899999999987 999999999999998741 1 123456677888
Q ss_pred Hhhhhhc
Q 008336 480 QYNEMAK 486 (569)
Q Consensus 480 ~l~~l~~ 486 (569)
.|+++.+
T Consensus 156 ~l~~l~~ 162 (163)
T 3gkn_A 156 ALKAHAK 162 (163)
T ss_dssp HHHHHCC
T ss_pred HHHHHhc
Confidence 8877653
No 42
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.82 E-value=1.1e-19 Score=162.36 Aligned_cols=119 Identities=24% Similarity=0.418 Sum_probs=102.4
Q ss_pred cccccCccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHH
Q 008336 12 QSLLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGY 89 (569)
Q Consensus 12 ~~~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~ 89 (569)
....|.++|+| +.+.+|+.+++++++|| ++|+||++||++|+.++|.|.++++++++++ +.|++|++|...+.+++|
T Consensus 8 ~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~-~~vv~i~~d~~~~~~~~~ 86 (152)
T 2lrt_A 8 DKIKEASIIDIQLKDLKGNTRSLTDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQG-FEIYQISLDGDEHFWKTS 86 (152)
T ss_dssp SSSCTTCSCCCCEEBTTSCEECTTTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGT-EEEEEEECSCCHHHHHHH
T ss_pred hhccCCCCCCeEEEcCCCCEEeHHHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCC-eEEEEEEccCCHHHHHHH
Confidence 34678999999 66789999999999999 9999999999999999999999999998875 999999999999889999
Q ss_pred HHhCCCcccccCCchh-HHHHHHhcCCCCccEEEEECCCCcEEEc
Q 008336 90 FSKMPWLAVPFSDSET-RDKLDELFKVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 90 ~~~~~~~~~~~~~~~~-~~~l~~~~~v~~~P~~~lid~~G~i~~~ 133 (569)
..+.++. .+.+... ...+.+.|++.++|+++|||++|+|+..
T Consensus 87 ~~~~~~~--~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 129 (152)
T 2lrt_A 87 ADNLPWV--CVRDANGAYSSYISLYNVTNLPSVFLVNRNNELSAR 129 (152)
T ss_dssp HTTCSSE--EEECSSGGGCHHHHHHTCCSCSEEEEEETTTEEEEE
T ss_pred HhCCCce--EEECCCCcchHHHHHcCcccCceEEEECCCCeEEEe
Confidence 8765443 3333332 2348899999999999999999999875
No 43
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.82 E-value=9.6e-20 Score=162.38 Aligned_cols=137 Identities=21% Similarity=0.399 Sum_probs=116.5
Q ss_pred CCc-ccee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcC
Q 008336 337 GDL-DFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGM 414 (569)
Q Consensus 337 ~~~-~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~ 414 (569)
..| +|.+ +.+|+.+++++++||++||+||++||++|+.++|.|.+++++++++ ++.+++|++|.+.+.++++++++
T Consensus 8 ~~p~~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~ 85 (152)
T 2lja_A 8 PSAASFSYPDINGKTVSLADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAGK--DIHFVSLSCDKNKKAWENMVTKD 85 (152)
T ss_dssp CCSSSCEEEETTTEEEESTTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTS--SEEEEEEECCSCHHHHHHHHHHH
T ss_pred CCCcccEeecCCCCEeeHHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccC--CeEEEEEEccCcHHHHHHHHHhc
Confidence 457 9988 9999999999999999999999999999999999999999999764 69999999999888999999988
Q ss_pred CCcccccCchhhHHHHHhcCCCCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhhcCCC
Q 008336 415 PWLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWP 489 (569)
Q Consensus 415 ~~~~~~~~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~~~~~ 489 (569)
++..+++..|....+++.|++.++|+++|+|++|+++.+..+. . ..++|.+.|++++.+.+
T Consensus 86 ~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~-----------~---~~~~l~~~l~~~~~~~~ 146 (152)
T 2lja_A 86 QLKGIQLHMGTDRTFMDAYLINGIPRFILLDRDGKIISANMTR-----------P---SDPKTAEKFNELLGLEG 146 (152)
T ss_dssp TCCSEEEECSSCTHHHHHTTCCSSCCEEEECTTSCEEESSCCC-----------T---TCHHHHHHHHHHHTCCS
T ss_pred CCCCceeecCcchhHHHHcCcCCCCEEEEECCCCeEEEccCCC-----------C---CHHHHHHHHHHHhcccc
Confidence 7655677777778899999999999999999999999984321 1 22456777777776554
No 44
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.82 E-value=6e-20 Score=164.90 Aligned_cols=118 Identities=15% Similarity=0.259 Sum_probs=102.4
Q ss_pred ccCccCCc-eec--CCCceeecCCCCCc-EEEEEecCCCHhhHhh-HHHHHHHHHHhcCCCCEEEEEEeCC------CCH
Q 008336 15 LSSSARDF-LIR--SNGDQVKLDSLKGK-IGLYFSASWCGPCQRF-TPILAEVYNELSRQGDFEVIFVSGD------EDD 83 (569)
Q Consensus 15 ~g~~~pdf-~~~--~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~-~p~l~~~~~~~~~~g~~~vv~v~~d------~~~ 83 (569)
.|.++|+| +.+ .+|+.+++++++|| +||+||++||++|+.+ +|.|.+++++|++.+ +.+++|++| ++.
T Consensus 2 ~g~~aP~f~l~~~~~~g~~~~l~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~-v~~v~v~~~~~~~~~~~~ 80 (158)
T 3eyt_A 2 NAMKAPELQIQQWFNSATDLTLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDK-VAVLGLHTVFEHHEAMTP 80 (158)
T ss_dssp CCEECCCCCEEEEESCSSCCCTGGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTT-EEEEEEECCCSCGGGSCH
T ss_pred CCCcCCCceehhhhcCCCccCHHHhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCC-EEEEEEEecccccccCCH
Confidence 48899999 445 38899999999999 9999999999999996 999999999998764 999999984 588
Q ss_pred HHHHHHHHhCCCcccccCCchhHH---HHHHhcCCCCccEEEEECCCCcEEEc
Q 008336 84 EAFKGYFSKMPWLAVPFSDSETRD---KLDELFKVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~~~v~~~P~~~lid~~G~i~~~ 133 (569)
+.+++|++++++.+..+.+..... .+.+.|++.++|+++|||++|+++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 133 (158)
T 3eyt_A 81 ISLKAFLHEYRIKFPVGVDQPGDGAMPRTMAAYQMRGTPSLLLIDKAGDLRAH 133 (158)
T ss_dssp HHHHHHHHHTTCCSCEEEECCCSSSSCHHHHHTTCCSSSEEEEECTTSEEEEE
T ss_pred HHHHHHHHHcCCCceEEEcCccchhhHHHHHHcCCCCCCEEEEECCCCCEEEE
Confidence 999999999998766555544321 58899999999999999999999874
No 45
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.81 E-value=7.8e-19 Score=167.61 Aligned_cols=185 Identities=12% Similarity=0.139 Sum_probs=121.1
Q ss_pred cCcEEEEEEecC-CcccchhhhHHHHHHHHHHhcCCCceEEEEeeccccHHHHHHHhcCCCcccccCCchhHHHHHhhcc
Q 008336 196 EGKTIGLYFSMS-SYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLARYFE 274 (569)
Q Consensus 196 ~gk~v~l~f~~~-~~~~c~~~~~~~~~~~~~~~~~~~~~ei~~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~f~ 274 (569)
+++.++++|+++ ||++|+.+.|.+.++++. ...+.++.++++..+ ...+++.|+
T Consensus 21 ~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~----~~~v~~~~vd~~~~~---------------------~~~~~~~~~ 75 (226)
T 1a8l_A 21 VNPVKLIVFVRKDHCQYCDQLKQLVQELSEL----TDKLSYEIVDFDTPE---------------------GKELAKRYR 75 (226)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHTT----CTTEEEEEEETTSHH---------------------HHHHHHHTT
T ss_pred CCCeEEEEEecCCCCchhHHHHHHHHHHHhh----CCceEEEEEeCCCcc---------------------cHHHHHHcC
Confidence 456778999999 999999999999887643 234555555554321 457899999
Q ss_pred cCCCceEEEECCCCCchhhhhHHHHHhhCCCCCCCChHHHHHHHHHHHHHHhhhhhhhhhccCCccceecCCCCce-ecc
Q 008336 275 LSTLPTLVIIGPDGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGDLDFVVGKNGGKV-PVS 353 (569)
Q Consensus 275 v~~~Ptlvi~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~f~~~~~g~~v-~l~ 353 (569)
|.++||++++..+..... ...| ..+...+..+.......... .. ..+...+ .+.
T Consensus 76 v~~~Pt~~~~~~g~~~~~-------~~~G----~~~~~~l~~~l~~~l~~~~~------------~~--~l~~~~~~~~~ 130 (226)
T 1a8l_A 76 IDRAPATTITQDGKDFGV-------RYFG----LPAGHEFAAFLEDIVDVSRE------------ET--NLMDETKQAIR 130 (226)
T ss_dssp CCSSSEEEEEETTBCCSE-------EEES----CCCTTHHHHHHHHHHHHHHT------------CC--CCCHHHHHHHT
T ss_pred CCcCceEEEEcCCceeeE-------EEec----cCcHHHHHHHHHHHHhhcCC------------CC--CCCHHHHHHHH
Confidence 999999999953322100 0111 11334444444432211100 00 0011110 011
Q ss_pred cCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhc-CCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHh
Q 008336 354 DLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKER-NESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRK 432 (569)
Q Consensus 354 ~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~ 432 (569)
...++.++|+||++||++|+++.|.|.+++++++.+ ..++.++.|+++..+ .+++.
T Consensus 131 ~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~-----------------------~l~~~ 187 (226)
T 1a8l_A 131 NIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYP-----------------------EWADQ 187 (226)
T ss_dssp TCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCH-----------------------HHHHH
T ss_pred hcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCH-----------------------HHHHh
Confidence 223455699999999999999999999999999731 124888888877554 58899
Q ss_pred cCCCCccEEEEECCCCcEEEcc
Q 008336 433 FKVSGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 433 ~~v~~~Pt~~lid~~G~i~~~~ 454 (569)
|+|+++||++++ ++|+.+.+.
T Consensus 188 ~~v~~~Pt~~~~-~~G~~~~~~ 208 (226)
T 1a8l_A 188 YNVMAVPKIVIQ-VNGEDRVEF 208 (226)
T ss_dssp TTCCSSCEEEEE-ETTEEEEEE
T ss_pred CCCcccCeEEEE-eCCceeEEE
Confidence 999999998888 689887663
No 46
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.81 E-value=6.1e-20 Score=165.18 Aligned_cols=121 Identities=16% Similarity=0.250 Sum_probs=103.7
Q ss_pred cccccCccCCc-eec-CCCceeecCCCCCc-EEEEEecCCCHhhHhh-HHHHHHHHHHhcCCCCEEEEEEeCC------C
Q 008336 12 QSLLSSSARDF-LIR-SNGDQVKLDSLKGK-IGLYFSASWCGPCQRF-TPILAEVYNELSRQGDFEVIFVSGD------E 81 (569)
Q Consensus 12 ~~~~g~~~pdf-~~~-~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~-~p~l~~~~~~~~~~g~~~vv~v~~d------~ 81 (569)
.++.|.++|+| +.+ .+|+.+++++++|| +||+||++||++|+.+ +|.|.+++++|++++ +.+++|+++ +
T Consensus 2 s~~~g~~~p~~~~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~-v~~v~v~~~~~~~~~~ 80 (160)
T 3lor_A 2 SSLDNAPLLELDVQEWVNHEGLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQ-VQVIGLHSVFEHHDVM 80 (160)
T ss_dssp --CTTCCBCCCCEEEESSSCCCCHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTT-EEEEEEECCCSCGGGS
T ss_pred cccCCCcCCCcccccccCCCccCHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCC-cEEEEEeccccccccC
Confidence 35679999999 555 79999999999999 9999999999999995 999999999998775 999999984 6
Q ss_pred CHHHHHHHHHhCCCcccccCCchhH----HHHHHhcCCCCccEEEEECCCCcEEEc
Q 008336 82 DDEAFKGYFSKMPWLAVPFSDSETR----DKLDELFKVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~v~~~P~~~lid~~G~i~~~ 133 (569)
+.+.+++|++++++.+..+.+.... ..+.+.|++.++|+++|||++|+++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 136 (160)
T 3lor_A 81 TPEALKVFIDEFGIKFPVAVDMPREGQRIPSTMKKYRLEGTPSIILADRKGRIRQV 136 (160)
T ss_dssp CHHHHHHHHHHTTCCSCEEEECCCTTCSSCHHHHHTTCCSSSEEEEECTTSBEEEE
T ss_pred CHHHHHHHHHHcCCCCcEEECCccccchhhhHHHhcccCccceEEEECCCCcEEEE
Confidence 8899999999998876655444331 128899999999999999999999874
No 47
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.81 E-value=2.1e-19 Score=160.06 Aligned_cols=116 Identities=28% Similarity=0.525 Sum_probs=104.0
Q ss_pred ccCccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHh
Q 008336 15 LSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSK 92 (569)
Q Consensus 15 ~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~ 92 (569)
+|.++|+| +.+.+|+.+++++++|| +||+||++||++|+.++|.|.++++++++.+ +.++.|+++.+.+.+++|+++
T Consensus 2 ~G~~~p~~~l~~~~g~~~~l~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~-v~vv~v~~d~~~~~~~~~~~~ 80 (151)
T 2f9s_A 2 EGSDAPNFVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQG-VEIVAVNVGESKIAVHNFMKS 80 (151)
T ss_dssp CCEECCCCEEECTTCCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGT-EEEEEEEESCCHHHHHHHHHH
T ss_pred CCCcCCcceeEcCCCCEEEHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCC-eEEEEEECCCCHHHHHHHHHH
Confidence 68999999 56789999999999999 9999999999999999999999999998764 999999999999999999999
Q ss_pred CCCcccccCCchhHHHHHHhcCCCCccEEEEECCCCcEEEc
Q 008336 93 MPWLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 93 ~~~~~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 133 (569)
+++.+..+.+.. ..+.+.|++.++|+++++|++|+++..
T Consensus 81 ~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 119 (151)
T 2f9s_A 81 YGVNFPVVLDTD--RQVLDAYDVSPLPTTFLINPEGKVVKV 119 (151)
T ss_dssp HTCCSCEEEETT--SHHHHHTTCCSSCEEEEECTTSEEEEE
T ss_pred cCCCceEEECCc--hHHHHhcCCCCCCeEEEECCCCcEEEE
Confidence 987765555443 368899999999999999999999864
No 48
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.81 E-value=2.6e-20 Score=165.06 Aligned_cols=120 Identities=23% Similarity=0.366 Sum_probs=106.6
Q ss_pred ccccCccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHH
Q 008336 13 SLLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYF 90 (569)
Q Consensus 13 ~~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~ 90 (569)
..+|.++|+| +.+.+|+.+++++++|| ++|+||++||++|+.++|.|.++++++++.+ +.+++|++|.+.+.+++|+
T Consensus 5 ~~~G~~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~-~~~v~v~~d~~~~~~~~~~ 83 (148)
T 3hcz_A 5 LLLGKKAPNLYMTDTTGTYRYLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKG-IQVYAANIERKDEEWLKFI 83 (148)
T ss_dssp CCTTSBCCCCCCBCTTSCBCCGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGT-EEEEEEECCSSSHHHHHHH
T ss_pred cCCCCcCCceEEecCCCCEEEhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCC-EEEEEEEecCCHHHHHHHH
Confidence 3679999999 55789999999999999 9999999999999999999999999998874 9999999998889999999
Q ss_pred HhCCCc-ccccCCchhHHHHHHhcCCCCccEEEEECCCCcEEEc
Q 008336 91 SKMPWL-AVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 91 ~~~~~~-~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 133 (569)
+++++. +..+.+......+.+.|++.++|+++++|++|+++..
T Consensus 84 ~~~~~~~~~~~~d~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~ 127 (148)
T 3hcz_A 84 RSKKIGGWLNVRDSKNHTDFKITYDIYATPVLYVLDKNKVIIAK 127 (148)
T ss_dssp HHHTCTTSEEEECTTCCCCHHHHHCCCSSCEEEEECTTCBEEEE
T ss_pred HHcCCCCceEEeccccchhHHHhcCcCCCCEEEEECCCCcEEEe
Confidence 999877 5555555443348899999999999999999999875
No 49
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.81 E-value=3.3e-19 Score=158.88 Aligned_cols=116 Identities=30% Similarity=0.503 Sum_probs=105.5
Q ss_pred cccCccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHH
Q 008336 14 LLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFS 91 (569)
Q Consensus 14 ~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~ 91 (569)
.+|.++|+| +.+ +|+.+++++++|| +||+||++||++|+.++|.|.++++++++.+ +.+++|++|.+.+.+++|++
T Consensus 4 ~~G~~~P~f~l~~-~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~-~~~v~v~~d~~~~~~~~~~~ 81 (152)
T 3gl3_A 4 DKGDKAPDFALPG-KTGVVKLSDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKG-FQVVAVNLDAKTGDAMKFLA 81 (152)
T ss_dssp CTTSBCCCCEEEB-SSSEEEGGGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGT-EEEEEEECCSSHHHHHHHHH
T ss_pred CCCCcCCceEeeC-CCCeEeHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCC-eEEEEEECCCCHHHHHHHHH
Confidence 479999999 456 9999999999999 9999999999999999999999999999875 99999999999999999999
Q ss_pred hCCCcccccCCchhHHHHHHhcCCCCccEEEEECCCCcEEEc
Q 008336 92 KMPWLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 92 ~~~~~~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 133 (569)
++++.+..+.+... .+.+.|++.++|+++|||++|+++..
T Consensus 82 ~~~~~~~~~~d~~~--~~~~~~~v~~~P~~~lid~~G~i~~~ 121 (152)
T 3gl3_A 82 QVPAEFTVAFDPKG--QTPRLYGVKGMPTSFLIDRNGKVLLQ 121 (152)
T ss_dssp HSCCCSEEEECTTC--HHHHHTTCCSSSEEEEECTTSBEEEE
T ss_pred HcCCCCceeECCcc--hhHHHcCCCCCCeEEEECCCCCEEEE
Confidence 99987776666553 68999999999999999999999874
No 50
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.81 E-value=3.6e-19 Score=158.61 Aligned_cols=116 Identities=17% Similarity=0.307 Sum_probs=97.4
Q ss_pred cCccCCceecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCC
Q 008336 16 SSSARDFLIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMP 94 (569)
Q Consensus 16 g~~~pdf~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~ 94 (569)
+.|+|+|....+|+.+++++++|| +||+|||+||++|+.++|.|.+++++++.. ++.|++|++| +.+.+++|+++++
T Consensus 2 ~~pa~~~~~~~~G~~~~l~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~-~v~vv~v~~d-~~~~~~~~~~~~~ 79 (151)
T 3raz_A 2 SLSADELAGWKDNTPQSLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKG-SVDMVGIALD-TSDNIGNFLKQTP 79 (151)
T ss_dssp -----CEEETTTCCEECGGGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTT-TEEEEEEESS-CHHHHHHHHHHSC
T ss_pred CCCcchhhcccCCCEecHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC-CeEEEEEECC-ChHHHHHHHHHcC
Confidence 457788876689999999999999 999999999999999999999999999766 4999999997 5678999999998
Q ss_pred CcccccCCc-hhHHHHHHhcC--CCCccEEEEECCCCcEEEc
Q 008336 95 WLAVPFSDS-ETRDKLDELFK--VMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 95 ~~~~~~~~~-~~~~~l~~~~~--v~~~P~~~lid~~G~i~~~ 133 (569)
..+..+.+. .....+.+.|+ +.++|+++|||++|+++..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 121 (151)
T 3raz_A 80 VSYPIWRYTGANSRNFMKTYGNTVGVLPFTVVEAPKCGYRQT 121 (151)
T ss_dssp CSSCEEEECCSCHHHHHHTTTCCSCCSSEEEEEETTTTEEEE
T ss_pred CCCceEecCccchHHHHHHhCCccCCCCEEEEECCCCcEEEE
Confidence 776665433 23457899999 9999999999999999864
No 51
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.81 E-value=7.2e-20 Score=164.31 Aligned_cols=116 Identities=22% Similarity=0.269 Sum_probs=96.3
Q ss_pred cccCccCCc-eecCCCceeecCCCCCc-EEEEEe-cCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHH
Q 008336 14 LLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYF 90 (569)
Q Consensus 14 ~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~ 90 (569)
-+|++||+| +.+.+|+.++|++++|| ++|+|| ++|||+|+.++|.|.+++++++..+ +.+++|+.| +++..++|+
T Consensus 5 ~vG~~aPdF~l~~~~G~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~-~~~v~vs~d-~~~~~~~~~ 82 (157)
T 4g2e_A 5 EIGELAPDFELPDTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVN-AVVLGISVD-PPFSNKAFK 82 (157)
T ss_dssp CTTSBCCCCEEEBTTSCEEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGCS-SEEEEEESS-CHHHHHHHH
T ss_pred CCCCCCcCeEeECCCCCEEeHHHHCCCeEEEEecCCCCCCccccchhhcccccccccccC-ceEeeeccc-chhHHHHHH
Confidence 379999999 66789999999999999 999998 9999999999999999999998875 999999998 577889999
Q ss_pred HhCCCcccccCCchhHHHHHHhcCCC-----------CccEEEEECCCCcEEEc
Q 008336 91 SKMPWLAVPFSDSETRDKLDELFKVM-----------GIPHLVILDENGKVLSD 133 (569)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~l~~~~~v~-----------~~P~~~lid~~G~i~~~ 133 (569)
+++++.+..+.|.+. .+++.||+. ..|++||||++|+|++.
T Consensus 83 ~~~~~~~p~l~D~~~--~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~ 134 (157)
T 4g2e_A 83 EHNKLNFTILSDYNR--EVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYK 134 (157)
T ss_dssp HHTTCCSEEEECTTS--HHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEE
T ss_pred HHcCCcEEEEEcCCc--HHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEE
Confidence 999987776666553 689999974 46899999999999874
No 52
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.81 E-value=1.4e-19 Score=167.27 Aligned_cols=139 Identities=25% Similarity=0.366 Sum_probs=114.6
Q ss_pred cCCcccee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCC-hhHHHHHHhc
Q 008336 336 SGDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRD-QTSFDEFFKG 413 (569)
Q Consensus 336 ~~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~-~~~~~~~~~~ 413 (569)
...|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|++++++++++ ++.|++|++|.+ .+.+++|+++
T Consensus 38 ~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~d~~~~~~~~~~~~~ 115 (186)
T 1jfu_A 38 LKLPDLAFEDADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGP--NFEVVAINIDTRDPEKPKTFLKE 115 (186)
T ss_dssp CBCCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBT--TEEEEEEECCCSCTTHHHHHHHH
T ss_pred CcCCCcEeEcCCCCEeeHHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccC--CcEEEEEECCCCCHHHHHHHHHH
Confidence 34589988 9999999999999999999999999999999999999999999754 699999999964 5788899999
Q ss_pred CCCcccccCchhhHHHHHhcCCC----CccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhhcCC
Q 008336 414 MPWLALPFGDARKASLSRKFKVS----GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGW 488 (569)
Q Consensus 414 ~~~~~~~~~~d~~~~l~~~~~v~----~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~~~~ 488 (569)
++...+|++.|....+.+.|++. ++|+++|||++|+|+.+..+. . ++ ..+++.+.|+.++++.
T Consensus 116 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~~g~-------~--~~---~~~~l~~~l~~ll~~~ 182 (186)
T 1jfu_A 116 ANLTRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEIATIAGP-------A--EW---ASEDALKLIRAATGKA 182 (186)
T ss_dssp TTCCTTCCEECTTCHHHHHHHTTTCCSSSSEEEEECTTSBEEEEEESC-------C--CT---TSHHHHHHHHHHHC--
T ss_pred cCCCCCceEECCcchHHHHhccccccCCCCEEEEECCCCCEEEEEecC-------C--cc---CHHHHHHHHHHHhccc
Confidence 88657888888888899999986 999999999999999884321 1 11 2245666677776543
No 53
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.81 E-value=1.4e-19 Score=161.47 Aligned_cols=140 Identities=19% Similarity=0.312 Sum_probs=117.2
Q ss_pred ccCCcccee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC-CChhHHHHHHh
Q 008336 335 VSGDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSD-RDQTSFDEFFK 412 (569)
Q Consensus 335 ~~~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d-~~~~~~~~~~~ 412 (569)
....|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|.+++++++++ ++.|++|+.+ .+.+.+++|++
T Consensus 5 G~~~p~~~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~~~~~~~~~~~~~~ 82 (153)
T 2l5o_A 5 SKTAPAFSLPDLHGKTVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNK--NFQVLAVAQPIDPIESVRQYVK 82 (153)
T ss_dssp CTTCCSCEEECTTSCEEEHHHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGT--TEEEEEEECTTSCHHHHHHHHH
T ss_pred CCCCCCcEeecCCCCCccHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC--CeEEEEEecCCCCHHHHHHHHH
Confidence 345689988 9999999999999999999999999999999999999999999865 6999999986 35678889999
Q ss_pred cCCCcccccCchhhHHHHHhcCCCCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhhcCCCcc
Q 008336 413 GMPWLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWPEN 491 (569)
Q Consensus 413 ~~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~~~~~~~ 491 (569)
+++ +.+++..+....+++.|++.++|+++|||++|+++.+..+. ...++|.+.|++++.....+
T Consensus 83 ~~~-~~~~~~~d~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~--------------~~~~~l~~~l~~ll~~~~~~ 146 (153)
T 2l5o_A 83 DYG-LPFTVMYDADKAVGQAFGTQVYPTSVLIGKKGEILKTYVGE--------------PDFGKLYQEIDTAWRNSDAE 146 (153)
T ss_dssp HTT-CCSEEEECSSCHHHHHHTCCSSSEEEEECSSSCCCEEEESS--------------CCHHHHHHHHHHHHHCCSSC
T ss_pred HcC-CCceEEcCchHHHHHHcCCCccCeEEEECCCCcEEEEEcCC--------------CCHHHHHHHHHHHHHhhhhc
Confidence 887 56777777788899999999999999999999998764221 23456778888887765543
No 54
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.80 E-value=3.7e-19 Score=155.11 Aligned_cols=115 Identities=25% Similarity=0.482 Sum_probs=103.8
Q ss_pred Ccccee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEe-----CCCChhHHHHHH
Q 008336 338 DLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFIS-----SDRDQTSFDEFF 411 (569)
Q Consensus 338 ~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is-----~d~~~~~~~~~~ 411 (569)
.|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|.++++++.. ++.++.|. .+.+.+.+++++
T Consensus 2 ~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~v~i~~~~~~~~~~~~~~~~~~ 78 (138)
T 4evm_A 2 VADFELMGVDGKTYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEAGD---DYVVLTVVSPGHKGEQSEADFKNWY 78 (138)
T ss_dssp CCCCEEEBTTSCEEEGGGGTTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT---TEEEEEEECTTSTTCCCHHHHHHHH
T ss_pred CCcceeECCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC---CcEEEEEEcCCCCchhhHHHHHHHH
Confidence 478987 999999999999999999999999999999999999999998654 48999994 456778999999
Q ss_pred hcCCCcccccCchhhHHHHHhcCCCCccEEEEECCCCcEEEccc
Q 008336 412 KGMPWLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKEA 455 (569)
Q Consensus 412 ~~~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~ 455 (569)
+++++..+|+..+....+++.|++.++|+++|+|++|+++.+..
T Consensus 79 ~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~ 122 (138)
T 4evm_A 79 KGLDYKNLPVLVDPSGKLLETYGVRSYPTQAFIDKEGKLVKTHP 122 (138)
T ss_dssp TTCCCTTCCEEECTTCHHHHHTTCCSSSEEEEECTTCCEEEEEE
T ss_pred hhcCCCCeeEEECcchHHHHHcCcccCCeEEEECCCCcEEEeec
Confidence 99997789998888889999999999999999999999998753
No 55
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.80 E-value=3.3e-19 Score=169.18 Aligned_cols=118 Identities=18% Similarity=0.296 Sum_probs=106.4
Q ss_pred cccCccCCc-eecCCCceeecCCCCCc--EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCC-------CCH
Q 008336 14 LLSSSARDF-LIRSNGDQVKLDSLKGK--IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD-------EDD 83 (569)
Q Consensus 14 ~~g~~~pdf-~~~~~g~~v~l~~~~gk--vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d-------~~~ 83 (569)
.+|.++|+| +.+.+|+.+++++++|| +||+||++||++|+.++|.|.+++++|++++ +.|++|++| ++.
T Consensus 33 ~~G~~aP~f~l~~~~G~~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~-v~vv~Vs~d~~~~~~~d~~ 111 (218)
T 3u5r_E 33 TLGTRAADFVLPDAGGNLFTLAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQG-LAVVAINSNDAQAFPEETL 111 (218)
T ss_dssp CTTCBCCCCCEECTTCCEECGGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTT-EEEEEEECSCTTTCGGGSH
T ss_pred CCCCcCCCcEeECCCCCEEeHHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCC-cEEEEEECCcccccccCCH
Confidence 579999999 66789999999999999 8999999999999999999999999998875 999999997 688
Q ss_pred HHHHHHHHhCCCcccccCCchhHHHHHHhcCCCCccEEEEECCCCcEEEcC
Q 008336 84 EAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLSDG 134 (569)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~~ 134 (569)
+.+++|++++++.+..+.+.. ..+.+.|++.++|+++|||++|+|+++.
T Consensus 112 ~~~~~~~~~~~~~~~~l~D~~--~~~~~~~~v~~~P~~~liD~~G~i~~~g 160 (218)
T 3u5r_E 112 ERVGAEVKAYGYGFPYLKDAS--QSVAKAYGAACTPDFFLYDRERRLVYHG 160 (218)
T ss_dssp HHHHHHHHHHTCCSCEEECTT--CHHHHHHTCCEESEEEEECTTCBEEEEE
T ss_pred HHHHHHHHHhCCCccEEECCc--cHHHHHcCCCCCCeEEEECCCCcEEEec
Confidence 999999999988776666644 3689999999999999999999998753
No 56
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.80 E-value=9.4e-19 Score=168.82 Aligned_cols=115 Identities=12% Similarity=0.184 Sum_probs=98.1
Q ss_pred cccCccCCce-ecC-CCc--eeecCC-CCCc-EEEEEe-cCCCHhhH-hhHHHHHHHHHHhcCCCCE-EEEEEeCCCCHH
Q 008336 14 LLSSSARDFL-IRS-NGD--QVKLDS-LKGK-IGLYFS-ASWCGPCQ-RFTPILAEVYNELSRQGDF-EVIFVSGDEDDE 84 (569)
Q Consensus 14 ~~g~~~pdf~-~~~-~g~--~v~l~~-~~gk-vlv~F~-a~wC~~C~-~~~p~l~~~~~~~~~~g~~-~vv~v~~d~~~~ 84 (569)
.+|.++|+|. .+. +|+ .+++++ ++|| ++|+|| ++|||+|+ .++|.|++++++|++.+ + +|++|+.| +.+
T Consensus 4 ~~G~~aP~f~l~~~~~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~-~~~vv~is~d-~~~ 81 (241)
T 1nm3_A 4 MEGKKVPQVTFRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYG-VDDILVVSVN-DTF 81 (241)
T ss_dssp CTTSBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTT-CCEEEEEESS-CHH
T ss_pred cCCCCCCCeEEEcccCCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCC-CCEEEEEEcC-CHH
Confidence 4799999994 454 677 999999 8999 999998 99999999 99999999999998875 9 99999998 477
Q ss_pred HHHHHHHhCCCc-ccccCCchhHHHHHHhcCCC-----------CccEEEEECCCCcEEEc
Q 008336 85 AFKGYFSKMPWL-AVPFSDSETRDKLDELFKVM-----------GIPHLVILDENGKVLSD 133 (569)
Q Consensus 85 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~v~-----------~~P~~~lid~~G~i~~~ 133 (569)
..++|+++++.. +..+.|.+ ..+++.||+. ..|+++|| ++|+|+..
T Consensus 82 ~~~~~~~~~~~~~~~~l~D~~--~~~~~~~gv~~~~~~~g~~~~~~p~t~li-~~G~i~~~ 139 (241)
T 1nm3_A 82 VMNAWKEDEKSENISFIPDGN--GEFTEGMGMLVGKEDLGFGKRSWRYSMLV-KNGVVEKM 139 (241)
T ss_dssp HHHHHHHHTTCTTSEEEECTT--SHHHHHTTCEEECTTTTCCEEECCEEEEE-ETTEEEEE
T ss_pred HHHHHHHhcCCCceEEEECCC--cHHHHHhCceeecccccCcccceeEEEEE-ECCEEEEE
Confidence 889999999876 54455544 4688999986 45999999 99999875
No 57
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.80 E-value=3.5e-19 Score=164.20 Aligned_cols=116 Identities=17% Similarity=0.225 Sum_probs=104.0
Q ss_pred cCCcccee-cC--CCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCe------EEEEEeCCC-Chh
Q 008336 336 SGDLDFVV-GK--NGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESL------EVVFISSDR-DQT 405 (569)
Q Consensus 336 ~~~~~f~~-~~--~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~------~vv~is~d~-~~~ 405 (569)
...|+|.+ +. +|+.+++++++||++||+||++||++|+.++|.|.+++++++++ ++ .|++|++|. +++
T Consensus 35 ~~~p~f~l~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~--~~~~~~~v~~v~v~~d~~~~~ 112 (183)
T 3lwa_A 35 QQLPDIGGDSLMEEGTQINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAA--GNGDTPGGTVLGINVRDYSRD 112 (183)
T ss_dssp CCCCCCEEEBSSSTTCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHC--C---CCSEEEEEEECSCCCHH
T ss_pred CCCCceeccccccCCcEecHHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhc--CCCccCCcEEEEEECCCCCHH
Confidence 45689988 88 99999999999999999999999999999999999999999876 46 999999998 789
Q ss_pred HHHHHHhcCCCcccccCchhhHHHHHhc---CCCCccEEEEECCCCcEEEcc
Q 008336 406 SFDEFFKGMPWLALPFGDARKASLSRKF---KVSGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~d~~~~l~~~~---~v~~~Pt~~lid~~G~i~~~~ 454 (569)
.+++|+++++ +.+|++.|....+.+.| ++.++|+++|||++|+|+.+.
T Consensus 113 ~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 163 (183)
T 3lwa_A 113 IAQDFVTDNG-LDYPSIYDPPFMTAASLGGVPASVIPTTIVLDKQHRPAAVF 163 (183)
T ss_dssp HHHHHHHHTT-CCSCEEECTTCGGGGGTTTCCTTCCSEEEEECTTSCEEEEE
T ss_pred HHHHHHHHcC-CCccEEECCcchHHHHhccCCCCCCCeEEEECCCCcEEEEE
Confidence 9999999887 56888888888888877 589999999999999999874
No 58
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.80 E-value=8.2e-21 Score=171.65 Aligned_cols=138 Identities=21% Similarity=0.309 Sum_probs=117.0
Q ss_pred cCCcccee-cCCCCceecccC--CCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHH
Q 008336 336 SGDLDFVV-GKNGGKVPVSDL--AGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFF 411 (569)
Q Consensus 336 ~~~~~f~~-~~~g~~v~l~~~--~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~ 411 (569)
...|+|.+ +.+|++++|+++ +||+++|+|| ++|||+|+.++|.|++++++++++ ++.+++||.| +++..++|.
T Consensus 9 ~~aPdF~l~~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~--~v~vv~is~d-~~~~~~~~~ 85 (164)
T 4gqc_A 9 EKAPDFTLPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKA--NAEVLAISVD-SPWCLKKFK 85 (164)
T ss_dssp SBCCCCEEEBTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGS--SSEEEEEESS-CHHHHHHHH
T ss_pred CCCcCcEeECCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhcc--CceEEEecCC-CHHHHHHHH
Confidence 34699998 999999999998 8999999998 999999999999999999999876 7999999998 567888999
Q ss_pred hcCCCcccccCchhhHHHHHhcCCC----------CccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHh
Q 008336 412 KGMPWLALPFGDARKASLSRKFKVS----------GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQY 481 (569)
Q Consensus 412 ~~~~~~~~~~~~d~~~~l~~~~~v~----------~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l 481 (569)
++++ +.||++.|.++++++.|||. ..|++||||++|+|++++... .|....+++++.+.+
T Consensus 86 ~~~~-~~fp~l~D~~~~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~---------~~~~~~~~~eil~~l 155 (164)
T 4gqc_A 86 DENR-LAFNLLSDYNREVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTD---------NPLNEPDYDEVVREA 155 (164)
T ss_dssp HHTT-CCSEEEECTTSHHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECS---------CTTCCCCHHHHHHHH
T ss_pred HhcC-cccceeecCchHHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeC---------CCCCCCCHHHHHHHH
Confidence 8887 68999999999999999984 478999999999999985322 134445677777887
Q ss_pred hhhhc
Q 008336 482 NEMAK 486 (569)
Q Consensus 482 ~~l~~ 486 (569)
++++.
T Consensus 156 ~~l~~ 160 (164)
T 4gqc_A 156 NKIAG 160 (164)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 77754
No 59
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.80 E-value=5.2e-19 Score=157.58 Aligned_cols=118 Identities=26% Similarity=0.516 Sum_probs=104.7
Q ss_pred cccCccC-Cc-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHH
Q 008336 14 LLSSSAR-DF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYF 90 (569)
Q Consensus 14 ~~g~~~p-df-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~ 90 (569)
.+|.++| +| +.+.+|+.+++++++|| ++|+||++||++|+.++|.|.++++++.+.+ +.+++|++|.+.+.+++|+
T Consensus 4 ~~G~~~p~~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~-~~~v~v~~d~~~~~~~~~~ 82 (152)
T 2lja_A 4 RSGNPSAASFSYPDINGKTVSLADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAGKD-IHFVSLSCDKNKKAWENMV 82 (152)
T ss_dssp TTTCCCSSSCEEEETTTEEEESTTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSS-EEEEEEECCSCHHHHHHHH
T ss_pred ccCCCCCcccEeecCCCCEeeHHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCC-eEEEEEEccCcHHHHHHHH
Confidence 3699999 99 55789999999999999 9999999999999999999999999998664 9999999999999999999
Q ss_pred HhCCCcccccCCchhHHHHHHhcCCCCccEEEEECCCCcEEEc
Q 008336 91 SKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 133 (569)
++.++.+.++.... ...+.+.|++.++|+++++|++|+++..
T Consensus 83 ~~~~~~~~~~~~d~-~~~~~~~~~v~~~P~~~lid~~G~i~~~ 124 (152)
T 2lja_A 83 TKDQLKGIQLHMGT-DRTFMDAYLINGIPRFILLDRDGKIISA 124 (152)
T ss_dssp HHHTCCSEEEECSS-CTHHHHHTTCCSSCCEEEECTTSCEEES
T ss_pred HhcCCCCceeecCc-chhHHHHcCcCCCCEEEEECCCCeEEEc
Confidence 99887766554332 2468899999999999999999999875
No 60
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.80 E-value=2.1e-19 Score=156.79 Aligned_cols=111 Identities=22% Similarity=0.355 Sum_probs=102.7
Q ss_pred CCcccee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCC
Q 008336 337 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMP 415 (569)
Q Consensus 337 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~ 415 (569)
..|+|.+ +.+|+.+++++++||+++|+||++||++|+.++|.|++++++++ ++.++.|++|.+.+.+++|+++++
T Consensus 3 ~~p~~~l~~~~g~~~~l~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~ 78 (136)
T 1lu4_A 3 ERLQFTATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP----AVTFVGIATRADVGAMQSFVSKYN 78 (136)
T ss_dssp GGGCCEEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEECSSCHHHHHHHHHHHT
T ss_pred CCCCeEeecCCCCeecHHHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC----CcEEEEEEcCCCHHHHHHHHHHcC
Confidence 3578887 99999999999999999999999999999999999999999986 489999999998999999999887
Q ss_pred CcccccCchhhHHHHHhcCCCCccEEEEECCCCcEEEc
Q 008336 416 WLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITK 453 (569)
Q Consensus 416 ~~~~~~~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~ 453 (569)
+.+|+..|....+++.|++.++|+++++|++|+++ +
T Consensus 79 -~~~~~~~d~~~~~~~~~~i~~~P~~~lid~~G~i~-~ 114 (136)
T 1lu4_A 79 -LNFTNLNDADGVIWARYNVPWQPAFVFYRADGTST-F 114 (136)
T ss_dssp -CCSEEEECTTSHHHHHTTCCSSSEEEEECTTSCEE-E
T ss_pred -CCceEEECCchhHHHhcCCCCCCEEEEECCCCcEE-E
Confidence 47888888888999999999999999999999998 5
No 61
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.80 E-value=5.1e-19 Score=158.04 Aligned_cols=118 Identities=31% Similarity=0.593 Sum_probs=105.2
Q ss_pred ccccCccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCC-HHHHHHH
Q 008336 13 SLLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDED-DEAFKGY 89 (569)
Q Consensus 13 ~~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~-~~~~~~~ 89 (569)
..+|.++|+| +.+.+|+.+++++++|| +||+||++||++|+.++|.|.++++++.+.+ +.+++|++|.+ .+.+++|
T Consensus 2 ~~~G~~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~-~~~v~v~~d~~~~~~~~~~ 80 (154)
T 3kcm_A 2 SLEENPAPDFTLNTLNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKP-FRMLCVSIDEGGKVAVEEF 80 (154)
T ss_dssp -CTTSBCCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSS-EEEEEEECCTTHHHHHHHH
T ss_pred CCCCCCCCCeEEEcCCCCEEehhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCC-eEEEEEEcCCcchHHHHHH
Confidence 3679999999 56789999999999999 9999999999999999999999999998764 99999999987 8889999
Q ss_pred HHhCCCcccccCCchhHHHHHHhcCCCCccEEEEECCCCcEEEc
Q 008336 90 FSKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 133 (569)
++++++.+..+.+.. ..+.+.|++.++|+++|+|++|+++..
T Consensus 81 ~~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 122 (154)
T 3kcm_A 81 FRKTGFTLPVLLDAD--KRVGKLYGTTGVPETFVIDRHGVILKK 122 (154)
T ss_dssp HHHHCCCCCEEECTT--CHHHHHHTCCSBCEEEEECTTSBEEEE
T ss_pred HHHcCCCeeEEecCc--hHHHHHhCCCCCCeEEEECCCCcEEEE
Confidence 999987766665544 468999999999999999999999874
No 62
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.80 E-value=7.1e-19 Score=158.96 Aligned_cols=117 Identities=25% Similarity=0.433 Sum_probs=104.9
Q ss_pred ccccCccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHH
Q 008336 13 SLLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYF 90 (569)
Q Consensus 13 ~~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~ 90 (569)
..+|.++|+| +.+.+|+.+++++++|| +||+||++||++|+.++|.|.++++++++.+ +.+++|++|.+.+.+++|+
T Consensus 8 ~~~g~~~p~~~l~~~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~-v~~v~v~~d~~~~~~~~~~ 86 (165)
T 3or5_A 8 DARPTPAPSFSGVTVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRG-FTFVGIAVNEQLPNVKNYM 86 (165)
T ss_dssp CCCCCBCCCCEEECTTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTT-EEEEEEECSCCHHHHHHHH
T ss_pred hcCCCCCCCceeeCCCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCC-eEEEEEECCCCHHHHHHHH
Confidence 4679999999 56789999999999999 9999999999999999999999999998774 9999999999999999999
Q ss_pred HhCCCcccccCCchhHHHHHHhc------CCCCccEEEEECCCCcEEEc
Q 008336 91 SKMPWLAVPFSDSETRDKLDELF------KVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~l~~~~------~v~~~P~~~lid~~G~i~~~ 133 (569)
+++++.+..+.+.. .+.+.| ++.++|+++|+|++|+++..
T Consensus 87 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~ 132 (165)
T 3or5_A 87 KTQGIIYPVMMATP---ELIRAFNGYIDGGITGIPTSFVIDASGNVSGV 132 (165)
T ss_dssp HHHTCCSCEEECCH---HHHHHHHTTSTTCSCSSSEEEEECTTSBEEEE
T ss_pred HHcCCCCceEecCH---HHHHHHhhhhccCCCCCCeEEEECCCCcEEEE
Confidence 99988776666554 466777 89999999999999999864
No 63
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.79 E-value=4.5e-19 Score=164.19 Aligned_cols=142 Identities=10% Similarity=0.205 Sum_probs=115.5
Q ss_pred CCcccee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC-------CChhHHH
Q 008336 337 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSD-------RDQTSFD 408 (569)
Q Consensus 337 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d-------~~~~~~~ 408 (569)
..|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|++++++++++ +.|++|++| .+.+.++
T Consensus 12 ~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~---~~~v~v~~d~~~~~~~d~~~~~~ 88 (188)
T 2cvb_A 12 PLIDAELPDPRGGRYRLSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK---VAFVGINANDYEKYPEDAPEKMA 88 (188)
T ss_dssp BCCCCEEECTTSCEEEGGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT---EEEEEEECCCTTTCGGGSHHHHH
T ss_pred CCCCceeecCCCCEEeHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC---eEEEEEEcCccccccccCHHHHH
Confidence 4589988 9999999999999999999999999999999999999999999764 999999996 4667889
Q ss_pred HHHhcCCCcccccCchhhHHHHHhcCCCCccEEEEECCCCcEEEccchhhHhhcCCCCCCC-CHHHHHHHHHHhhhhhcC
Q 008336 409 EFFKGMPWLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPF-TEERMKEIDGQYNEMAKG 487 (569)
Q Consensus 409 ~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~-~~~~~~~l~~~l~~l~~~ 487 (569)
+|+++++ +.+|++.|....+++.|++.++|+++|||++|+|++++.... + .++ .....++|.+.|++++++
T Consensus 89 ~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~g~~~~---~----~~~~g~~~~~~l~~~i~~ll~~ 160 (188)
T 2cvb_A 89 AFAEEHG-IFFPYLLDETQEVAKAYRALRTPEVFLFDERRLLRYHGRVND---N----PKDPSKVQSHDLEAAIEALLRG 160 (188)
T ss_dssp HHHHHHT-CCSCEEECSSSHHHHHTTCCEESEEEEECTTCBEEEEECSSS---C----TTCGGGCCCCHHHHHHHHHHTT
T ss_pred HHHHHhC-CCceEEECCcchHHHHcCCCCCCeEEEECCCCcEEEEEecCC---c----cccccccCHHHHHHHHHHHHcC
Confidence 9999887 578888888889999999999999999999999999822110 0 000 001224567777777765
Q ss_pred CC
Q 008336 488 WP 489 (569)
Q Consensus 488 ~~ 489 (569)
.+
T Consensus 161 ~~ 162 (188)
T 2cvb_A 161 EE 162 (188)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 64
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.79 E-value=3.7e-19 Score=161.00 Aligned_cols=110 Identities=22% Similarity=0.397 Sum_probs=102.5
Q ss_pred Ccccee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC---------------
Q 008336 338 DLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSD--------------- 401 (569)
Q Consensus 338 ~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d--------------- 401 (569)
.|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|.+++++++ ++.|++|++|
T Consensus 17 ~p~~~l~~~~g~~~~l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~----~v~vv~i~~d~~~~~~~~~~~~~~~ 92 (165)
T 3ha9_A 17 EASFSLTTIDGEVISLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR----EISVIAIDFWTAEALKALGLNKPGY 92 (165)
T ss_dssp HHCCCEEBTTSCEECGGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT----TEEEEEEECCSHHHHHHHTCCSTTS
T ss_pred CCCCEeecCCCCEeeHHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC----CcEEEEEEecccccccccccccccC
Confidence 478877 99999999999999999999999999999999999999999987 4999999999
Q ss_pred ---CChhHHHHHHhcCCCcccccCchhhHHHHHhcCCCCccEEEEECCCCcEEE
Q 008336 402 ---RDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTIT 452 (569)
Q Consensus 402 ---~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~ 452 (569)
.+.+.+++|++++++..+|+..| ...+++.|+|.++|+++|||++|+++.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~v~~~P~~~lid~~G~i~~ 145 (165)
T 3ha9_A 93 PPPDTPEMFRKFIANYGDPSWIMVMD-DGSLVEKFNVRSIDYIVIMDKSSNVLY 145 (165)
T ss_dssp CCCCCHHHHHHHHHHHSCTTSEEEEC-CSHHHHHTTCCSSSEEEEEETTCCEEE
T ss_pred CCCCCHHHHHHHHHHcCCCCeeEEeC-hHHHHHHhCCCCceEEEEEcCCCcEEE
Confidence 78899999999988558888888 889999999999999999999999999
No 65
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.79 E-value=3.8e-19 Score=154.92 Aligned_cols=112 Identities=21% Similarity=0.356 Sum_probs=103.4
Q ss_pred CCcccee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCC
Q 008336 337 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMP 415 (569)
Q Consensus 337 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~ 415 (569)
..|+|.+ +.+|+.+++++++||+++|+||++||++|+.++|.|.+++++++ ++.++.|++|.+.+.+++++++++
T Consensus 4 ~~p~~~~~~~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~ 79 (136)
T 1zzo_A 4 AQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP----EVTFVGVAGLDQVPAMQEFVNKYP 79 (136)
T ss_dssp GGGCCEEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEECSSCHHHHHHHHHHTT
T ss_pred CCCCcccccCCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC----CeEEEEEeCCCCHHHHHHHHHHcC
Confidence 3578887 89999999999999999999999999999999999999999986 389999999999999999999998
Q ss_pred CcccccCchhhHHHHHhcCCCCccEEEEECCCCcEEEc
Q 008336 416 WLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITK 453 (569)
Q Consensus 416 ~~~~~~~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~ 453 (569)
...+|+..+....+++.|++.++|++++||++|+++ +
T Consensus 80 ~~~~~~~~d~~~~~~~~~~i~~~P~~~~id~~g~i~-~ 116 (136)
T 1zzo_A 80 VKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVD-V 116 (136)
T ss_dssp CTTSEEEECTTCHHHHHTTCCSSSEEEEECTTCCEE-E
T ss_pred CCceEEEEcCCcHHHHHcCCCCCceEEEECCCCCEE-E
Confidence 558888888888999999999999999999999998 5
No 66
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.79 E-value=5.2e-18 Score=173.03 Aligned_cols=272 Identities=17% Similarity=0.174 Sum_probs=170.2
Q ss_pred CCc-EEEEEecCCCHhhHhhHHH-------HHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHH
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPI-------LAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDK 108 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~-------l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (569)
.++ ++|+||||||+ |++++|. +.++++.++.. ++.++.|+++... .
T Consensus 27 ~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~-~v~~~~Vd~~~~~------------------------~ 80 (350)
T 1sji_A 27 KYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHK-DIGFVMVDAKKEA------------------------K 80 (350)
T ss_dssp TCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGS-SEEEEEEETTTTH------------------------H
T ss_pred hCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhc-CcEEEEEeCCCCH------------------------H
Confidence 467 99999999999 9999999 89999999765 4999999998763 4
Q ss_pred HHHhcCCCCccEEEEECCCCcEEEcCCcceeecccCCCCCccHHHHHHHHHHHHHHHhhcccccccccCCCceeecCC-C
Q 008336 109 LDELFKVMGIPHLVILDENGKVLSDGGVEIIREYGVEGYPFTVERIKEMKEQEERAKREQSLRSVLTSHSRDFVISSD-G 187 (569)
Q Consensus 109 l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~d~~~~~~-~ 187 (569)
+++.|+|+++||++++ ++|++....| +.+.+.+.+++... ..+.+...+ .
T Consensus 81 l~~~~~v~~~Pt~~~~-~~g~~~~~~G------------~~~~~~l~~~i~~~----------------~~~~~~~l~~~ 131 (350)
T 1sji_A 81 LAKKLGFDEEGSLYVL-KGDRTIEFDG------------EFAADVLVEFLLDL----------------IEDPVEIINSK 131 (350)
T ss_dssp HHHHHTCCSTTEEEEE-ETTEEEEECS------------CCCHHHHHHHHHTT----------------SSCSEEECCSH
T ss_pred HHHhcCCCccceEEEE-ECCcEEEecC------------CCCHHHHHHHHHHh----------------cCCcceeccch
Confidence 8999999999999999 7787543222 34555555544221 011111111 1
Q ss_pred ceeeec-cccCcEEEEEEecCCcccchhhhHHHHHHHHHHhcCCCceEEEEeeccccHHHHHHHhcCCCcccccCCchhH
Q 008336 188 RKISVS-DLEGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSR 266 (569)
Q Consensus 188 ~~~~~~-~~~gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ei~~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~ 266 (569)
+.+... ....+.+.+.|+.++| ....+.+.+++..++.. +.|.... .
T Consensus 132 ~~~~~~~~~~~~~~vv~ff~~~~---~~~~~~~~~~A~~~~~~-----~~f~~~~------------------------~ 179 (350)
T 1sji_A 132 LEVQAFERIEDQIKLIGFFKSEE---SEYYKAFEEAAEHFQPY-----IKFFATF------------------------D 179 (350)
T ss_dssp HHHHHHHHCCSSCEEEEECSCTT---SHHHHHHHHHHHHTTTT-----SEEEEEC------------------------C
T ss_pred HHHHHHhccCCCcEEEEEECCCC---cHHHHHHHHHHHhhccC-----cEEEEEC------------------------C
Confidence 111110 0022345566666654 45567888888887653 3333322 2
Q ss_pred HHHHhhcccCCCceEEEECCCCCchhhhhHHHHHhhCCCCCCCChHHHHHHHHHHHHHHhhhhhhhhhccCCccce-ecC
Q 008336 267 EKLARYFELSTLPTLVIIGPDGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGDLDFV-VGK 345 (569)
Q Consensus 267 ~~l~~~f~v~~~Ptlvi~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~f~-~~~ 345 (569)
..+++.|+++ .|+++++.+.++... .|.. .+++.+.+..++..... |-+. ++.
T Consensus 180 ~~~~~~~~v~-~p~i~~~~~~~~~~~--------~y~g--~~~~~~~l~~fi~~~~~---------------p~v~elt~ 233 (350)
T 1sji_A 180 KGVAKKLSLK-MNEVDFYEPFMDEPI--------AIPD--KPYTEEELVEFVKEHQR---------------PTLRRLRP 233 (350)
T ss_dssp HHHHHHHTCC-TTCEEEECTTCSSCE--------ECSS--SSCCHHHHHHHHHHHCC---------------CSEEECCT
T ss_pred HHHHHHcCCC-CCcEEEEeCCCCCce--------ecCC--CCCCHHHHHHHHHHcCc---------------cchhhcCh
Confidence 3577889999 999999986432210 0110 13577788877764221 1111 111
Q ss_pred -CCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCch
Q 008336 346 -NGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDA 424 (569)
Q Consensus 346 -~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d 424 (569)
+...+ ...-..+..+|.|..+||+.|....+.|.++++++++. ..+.++.++.+..+
T Consensus 234 ~~~~~~-~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~-~~~~f~~id~~~~~-------------------- 291 (350)
T 1sji_A 234 EDMFET-WEDDLNGIHIVAFAERSDPDGYEFLEILKQVARDNTDN-PDLSIVWIDPDDFP-------------------- 291 (350)
T ss_dssp TTHHHH-HHSCSSSEEEEEECCTTSHHHHHHHHHHHHHHHHGGGC-SSCCEEEECGGGCH--------------------
T ss_pred hhHHHH-hcCCCCCcEEEEEEcCCCccHHHHHHHHHHHHHHhCCC-CceEEEEECchhhH--------------------
Confidence 11111 11111244455688999999999999999999999851 13677777655332
Q ss_pred hhHHHH----HhcCCC-CccEEEEECC
Q 008336 425 RKASLS----RKFKVS-GIPMLVAIGP 446 (569)
Q Consensus 425 ~~~~l~----~~~~v~-~~Pt~~lid~ 446 (569)
.++ +.||+. ..|++++++.
T Consensus 292 ---~~~~~~~~~~gi~~~~P~~~i~~~ 315 (350)
T 1sji_A 292 ---LLVAYWEKTFKIDLFKPQIGVVNV 315 (350)
T ss_dssp ---HHHHHHHHHCCSCTTSCEEEEEES
T ss_pred ---HHHHHHHhhcCCCccCCcEEEEec
Confidence 234 778887 5899999987
No 67
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.79 E-value=8.6e-19 Score=158.29 Aligned_cols=134 Identities=22% Similarity=0.360 Sum_probs=110.2
Q ss_pred Ccccee-cCCCCceecccCCCCEEEEEEecCCChh-HHhhhHHHHHHHHHHhhc--CCCeEEEEEeCCC---ChhHHHHH
Q 008336 338 DLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPP-CRAFLPKLIDAYKKIKER--NESLEVVFISSDR---DQTSFDEF 410 (569)
Q Consensus 338 ~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~-C~~~~~~l~~l~~~~~~~--~~~~~vv~is~d~---~~~~~~~~ 410 (569)
.|+|.+ +.+|+++++++++||++||+||++||++ |+.++|.|+++++++++. ..++.|++|++|. +++.+++|
T Consensus 3 ap~f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~ 82 (164)
T 2ggt_A 3 GGPFSLTTHTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANY 82 (164)
T ss_dssp CCCCEEEETTSCEEEGGGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHH
T ss_pred CCCeEEEeCCCCEEeHHHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHH
Confidence 488988 9999999999999999999999999998 999999999999999862 1369999999986 46788999
Q ss_pred HhcCCCcccccC---chhhHHHHHhcCCCCcc---------------EEEEECCCCcEEEccchhhHhhcCCCCCCCCHH
Q 008336 411 FKGMPWLALPFG---DARKASLSRKFKVSGIP---------------MLVAIGPSGRTITKEARDMIAVHGAEAYPFTEE 472 (569)
Q Consensus 411 ~~~~~~~~~~~~---~d~~~~l~~~~~v~~~P---------------t~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~ 472 (569)
+++++ +.++++ .+....+++.|+|..+| +++|||++|+++.+..+. ..
T Consensus 83 ~~~~~-~~~~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~-----------~~-- 148 (164)
T 2ggt_A 83 VKEFS-PKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQN-----------KR-- 148 (164)
T ss_dssp HHTTC-SSCEEEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETT-----------CC--
T ss_pred HHHcC-CCeEEEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCC-----------CC--
Confidence 99876 455554 46667899999999999 899999999999985321 12
Q ss_pred HHHHHHHHhhhhhc
Q 008336 473 RMKEIDGQYNEMAK 486 (569)
Q Consensus 473 ~~~~l~~~l~~l~~ 486 (569)
.++|.+.|+++++
T Consensus 149 -~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 149 -KGEIAASIATHMR 161 (164)
T ss_dssp -HHHHHHHHHHHHG
T ss_pred -HHHHHHHHHHHHH
Confidence 2556666766664
No 68
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.79 E-value=8.2e-19 Score=154.67 Aligned_cols=118 Identities=19% Similarity=0.405 Sum_probs=102.5
Q ss_pred cccccCccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCC---CHHHH
Q 008336 12 QSLLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDE---DDEAF 86 (569)
Q Consensus 12 ~~~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~---~~~~~ 86 (569)
...+|.++|+| +.+.+|+.+++++ +|| +||+||++||++|+.++|.|.+++++++..+ +.++.|++|. +.+.+
T Consensus 8 ~~~~g~~~p~~~l~~~~g~~~~l~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~-~~~v~v~~d~~~~~~~~~ 85 (145)
T 3erw_A 8 EEKQPAVPAVFLMKTIEGEDISIPN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDS-VKLVTVNLVNSEQNQQVV 85 (145)
T ss_dssp ----CCSCCEEEEECTTSCEEEESC-TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSS-EEEEEEECGGGSSCHHHH
T ss_pred cccCCCcCCCceeecCCCCEEeHHH-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCC-EEEEEEEccCCcCCHHHH
Confidence 34679999999 6678999999999 999 9999999999999999999999999998664 9999999985 88999
Q ss_pred HHHHHhCCCcccccCCchhHHHHHHhcCCCCccEEEEECCCCcEEEc
Q 008336 87 KGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 133 (569)
++|++++++.+..+.+.. ..+.+.|++.++|+++++|++|+++..
T Consensus 86 ~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 130 (145)
T 3erw_A 86 EDFIKANKLTFPIVLDSK--GELMKEYHIITIPTSFLLNEKGEIEKT 130 (145)
T ss_dssp HHHHHHTTCCSCEEECSS--SHHHHHTTCCEESEEEEECTTCCEEEE
T ss_pred HHHHHHcCCceeEEEcCc--hhHHHhcCcCccCeEEEEcCCCcEEEE
Confidence 999999988766655544 368999999999999999999999863
No 69
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.79 E-value=7.6e-19 Score=160.85 Aligned_cols=114 Identities=20% Similarity=0.344 Sum_probs=100.5
Q ss_pred ccccCccCCc-eecCCC--ceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHH
Q 008336 13 SLLSSSARDF-LIRSNG--DQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKG 88 (569)
Q Consensus 13 ~~~g~~~pdf-~~~~~g--~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~ 88 (569)
..+|.++|+| +.+.+| +.+++++++|| +||+||++||++|+.++|.|.+++++ + +.|++|+++++.+.+++
T Consensus 30 ~~~G~~~P~f~l~~~~g~~~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~-v~vv~vs~~d~~~~~~~ 104 (176)
T 3kh7_A 30 ALIGKPFPAFDLPSVQDPARRLTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ----G-VVIYGINYKDDNAAAIK 104 (176)
T ss_dssp TTTTSBCCCCEEEBSSCTTSEEEGGGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----T-CEEEEEEESCCHHHHHH
T ss_pred cccCCcCCCcEecccCCCCceecHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC----C-CEEEEEeCCCCHHHHHH
Confidence 3689999999 556788 89999999999 99999999999999999999999876 3 99999999999999999
Q ss_pred HHHhCCCccccc-CCchhHHHHHHhcCCCCccEEEEECCCCcEEEc
Q 008336 89 YFSKMPWLAVPF-SDSETRDKLDELFKVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 89 ~~~~~~~~~~~~-~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 133 (569)
|++++++.+..+ .+.. ..+.+.|++.++|+++|||++|+|+..
T Consensus 105 ~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 148 (176)
T 3kh7_A 105 WLNELHNPYLLSISDAD--GTLGLDLGVYGAPETYLIDKQGIIRHK 148 (176)
T ss_dssp HHHHTTCCCSEEEEETT--CHHHHHHTCCSSCEEEEECTTCBEEEE
T ss_pred HHHHcCCCCceEEECCc--chHHHHcCCCCCCeEEEECCCCeEEEE
Confidence 999999876643 3322 478999999999999999999999874
No 70
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.79 E-value=4.3e-19 Score=162.96 Aligned_cols=133 Identities=18% Similarity=0.174 Sum_probs=113.6
Q ss_pred Ccccee-cCCCCceecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCC
Q 008336 338 DLDFVV-GKNGGKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMP 415 (569)
Q Consensus 338 ~~~f~~-~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~ 415 (569)
.|+|.+ +.+|+++++++++||++||+|| ++||++|+.++|.|++++++++++ ++.|++|+.| +.+..++|+++++
T Consensus 31 aP~f~l~~~~G~~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~--~~~vv~Vs~D-~~~~~~~~~~~~~ 107 (179)
T 3ixr_A 31 LLNHPLMLSGSTCKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQI--NATVLGVSRD-SVKSHDSFCAKQG 107 (179)
T ss_dssp HHHCCEEEGGGEEECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTT--TEEEEEEESC-CHHHHHHHHHHHT
T ss_pred CCCeeEECCCCCEEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC--CCEEEEEcCC-CHHHHHHHHHHcC
Confidence 479988 9999999999999999999999 999999999999999999999876 7999999998 4577889998876
Q ss_pred CcccccCchhhHHHHHhcCCCC------------ccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhh
Q 008336 416 WLALPFGDARKASLSRKFKVSG------------IPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNE 483 (569)
Q Consensus 416 ~~~~~~~~d~~~~l~~~~~v~~------------~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~ 483 (569)
+.||++.|....+++.|++.. +|++||||++|+|++... + ......++++.+.|++
T Consensus 108 -~~f~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~~-------~----~~~~~~~~~il~~l~~ 175 (179)
T 3ixr_A 108 -FTFPLVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAWR-------Q----VKVPGHAEEVLNKLKA 175 (179)
T ss_dssp -CCSCEEECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEEC-------S----CCSTTHHHHHHHHHHH
T ss_pred -CceEEEECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEEc-------C----CCCCCCHHHHHHHHHH
Confidence 678988898899999999864 699999999999998741 1 1234566777777776
Q ss_pred hh
Q 008336 484 MA 485 (569)
Q Consensus 484 l~ 485 (569)
+.
T Consensus 176 l~ 177 (179)
T 3ixr_A 176 HA 177 (179)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 71
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.78 E-value=1e-18 Score=161.04 Aligned_cols=118 Identities=16% Similarity=0.225 Sum_probs=102.7
Q ss_pred ccccCccCCc-eecC--CCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCE------EEEEEeCCC-
Q 008336 13 SLLSSSARDF-LIRS--NGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDF------EVIFVSGDE- 81 (569)
Q Consensus 13 ~~~g~~~pdf-~~~~--~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~------~vv~v~~d~- 81 (569)
...|.++|+| +.+. +|+.+++++++|| +||+||++||++|+.++|.|.+++++|++++ + .|++|++|.
T Consensus 31 ~~~g~~~p~f~l~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~-~~~~~~v~~v~v~~d~~ 109 (183)
T 3lwa_A 31 EADRQQLPDIGGDSLMEEGTQINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAG-NGDTPGGTVLGINVRDY 109 (183)
T ss_dssp GGGCCCCCCCEEEBSSSTTCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC----CCSEEEEEEECSCC
T ss_pred cccCCCCCceeccccccCCcEecHHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcC-CCccCCcEEEEEECCCC
Confidence 3568999999 5678 9999999999999 9999999999999999999999999998875 7 999999998
Q ss_pred CHHHHHHHHHhCCCcccccCCchhHHHHHHhc---CCCCccEEEEECCCCcEEEc
Q 008336 82 DDEAFKGYFSKMPWLAVPFSDSETRDKLDELF---KVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~v~~~P~~~lid~~G~i~~~ 133 (569)
+.+.+++|++++++.+..+.+... .+.+.| ++.++|+++|||++|+++..
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 162 (183)
T 3lwa_A 110 SRDIAQDFVTDNGLDYPSIYDPPF--MTAASLGGVPASVIPTTIVLDKQHRPAAV 162 (183)
T ss_dssp CHHHHHHHHHHTTCCSCEEECTTC--GGGGGTTTCCTTCCSEEEEECTTSCEEEE
T ss_pred CHHHHHHHHHHcCCCccEEECCcc--hHHHHhccCCCCCCCeEEEECCCCcEEEE
Confidence 899999999999987776665543 355555 58999999999999999864
No 72
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.78 E-value=2.2e-19 Score=166.13 Aligned_cols=135 Identities=16% Similarity=0.208 Sum_probs=104.5
Q ss_pred CCcccee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC-------CChhHHH
Q 008336 337 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSD-------RDQTSFD 408 (569)
Q Consensus 337 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d-------~~~~~~~ 408 (569)
..|+|.+ +.+|+.+++++++||+|||+||++||++|+.++|.|++++++++++ ++.||+|++| .+.+.++
T Consensus 25 ~~p~f~l~d~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~--~~~vi~is~d~~~~~e~~~~~~~~ 102 (187)
T 3dwv_A 25 SIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ--GFTVLAFPSNQFGGQEPGNEEEIK 102 (187)
T ss_dssp SGGGSCCBBTTSCBCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGG--TCEEEEEEBCCCSSCSSSBTTHHH
T ss_pred ccCCeEEEcCCCCEeeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhC--CeEEEEEECcccCCCCCCCHHHHH
Confidence 4589988 9999999999999999999999999999999999999999999876 6999999998 3567888
Q ss_pred HHHhcCCCcccccCc--hhhHH----HH--------HhcCCCCcc---EEEEECCCCcEEEccchhhHhhcCCCCCCCCH
Q 008336 409 EFFKGMPWLALPFGD--ARKAS----LS--------RKFKVSGIP---MLVAIGPSGRTITKEARDMIAVHGAEAYPFTE 471 (569)
Q Consensus 409 ~~~~~~~~~~~~~~~--d~~~~----l~--------~~~~v~~~P---t~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~ 471 (569)
+|++..-.+.+|+.. |.... +. ..+++..+| ++||||++|+|+.+..+. .
T Consensus 103 ~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~-----------~-- 169 (187)
T 3dwv_A 103 EFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPG-----------A-- 169 (187)
T ss_dssp HSCCBCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTT-----------C--
T ss_pred HHHHhccCCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCC-----------C--
Confidence 888844225666653 22221 11 345667788 999999999999984321 1
Q ss_pred HHHHHHHHHhhhhhcC
Q 008336 472 ERMKEIDGQYNEMAKG 487 (569)
Q Consensus 472 ~~~~~l~~~l~~l~~~ 487 (569)
..++|.+.|++++++
T Consensus 170 -~~~~l~~~i~~lL~~ 184 (187)
T 3dwv_A 170 -SVKDIEEKLIPLLGS 184 (187)
T ss_dssp -CHHHHHHHHHHHC--
T ss_pred -CHHHHHHHHHHHHhc
Confidence 224577778777764
No 73
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.78 E-value=1.2e-18 Score=159.55 Aligned_cols=114 Identities=20% Similarity=0.255 Sum_probs=100.9
Q ss_pred ccCCcccee-cCCC--CceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHH
Q 008336 335 VSGDLDFVV-GKNG--GKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFF 411 (569)
Q Consensus 335 ~~~~~~f~~-~~~g--~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~ 411 (569)
....|+|.+ +.+| +.+++++++||++||+||++||++|+.++|.|++++++ ++.|++|++|.+.+.+++|+
T Consensus 33 G~~~P~f~l~~~~g~~~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~------~v~vv~vs~~d~~~~~~~~~ 106 (176)
T 3kh7_A 33 GKPFPAFDLPSVQDPARRLTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ------GVVIYGINYKDDNAAAIKWL 106 (176)
T ss_dssp TSBCCCCEEEBSSCTTSEEEGGGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT------TCEEEEEEESCCHHHHHHHH
T ss_pred CCcCCCcEecccCCCCceecHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC------CCEEEEEeCCCCHHHHHHHH
Confidence 344689988 8888 88999999999999999999999999999999988775 38999999998999999999
Q ss_pred hcCCCcccccCchhhHHHHHhcCCCCccEEEEECCCCcEEEcc
Q 008336 412 KGMPWLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 412 ~~~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~ 454 (569)
+++++....+..|....+++.|++.++|+++|||++|+|+++.
T Consensus 107 ~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 149 (176)
T 3kh7_A 107 NELHNPYLLSISDADGTLGLDLGVYGAPETYLIDKQGIIRHKI 149 (176)
T ss_dssp HHTTCCCSEEEEETTCHHHHHHTCCSSCEEEEECTTCBEEEEE
T ss_pred HHcCCCCceEEECCcchHHHHcCCCCCCeEEEECCCCeEEEEE
Confidence 9988443335667788999999999999999999999999884
No 74
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.65 E-value=1.2e-20 Score=166.38 Aligned_cols=121 Identities=34% Similarity=0.715 Sum_probs=107.0
Q ss_pred Ccccee-cCCCCceeccc-CCCC-EEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcC
Q 008336 338 DLDFVV-GKNGGKVPVSD-LAGK-TILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGM 414 (569)
Q Consensus 338 ~~~f~~-~~~g~~v~l~~-~~gk-~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~ 414 (569)
.|+|.+ +.+|+.+++++ ++|| ++||+||++||++|+.++|.|+++++++++...++.|++|++|.+.+.+++|++++
T Consensus 4 ~p~~~l~~~~g~~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~ 83 (143)
T 2lus_A 4 IQGIKLVKKNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMES 83 (143)
Confidence 377877 89999999999 9999 99999999999999999999999999996433469999999998888899998876
Q ss_pred --CCcccccCchhhHHHHHhcCCCCccEEEEECCCCcEEEccchhh
Q 008336 415 --PWLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKEARDM 458 (569)
Q Consensus 415 --~~~~~~~~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~~~~ 458 (569)
+|..+++..+....+++.|+|.++|+++|||++|+++.++++..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~ 129 (143)
T 2lus_A 84 HGDWLAIPYRSGPASNVTAKYGITGIPALVIVKKDGTLISMNGRGE 129 (143)
Confidence 56777777787788999999999999999999999999976543
No 75
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.78 E-value=1.2e-18 Score=153.56 Aligned_cols=115 Identities=22% Similarity=0.479 Sum_probs=104.5
Q ss_pred cCCcccee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC---ChhHHHHHH
Q 008336 336 SGDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR---DQTSFDEFF 411 (569)
Q Consensus 336 ~~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~---~~~~~~~~~ 411 (569)
...|+|.+ +.+|+.+++++ +||++||+||++||++|+.++|.|.+++++++.. ++.++.|++|. +.+.+++|+
T Consensus 13 ~~~p~~~l~~~~g~~~~l~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~ 89 (145)
T 3erw_A 13 AVPAVFLMKTIEGEDISIPN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSD--SVKLVTVNLVNSEQNQQVVEDFI 89 (145)
T ss_dssp CSCCEEEEECTTSCEEEESC-TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCS--SEEEEEEECGGGSSCHHHHHHHH
T ss_pred CcCCCceeecCCCCEEeHHH-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCC--CEEEEEEEccCCcCCHHHHHHHH
Confidence 34688987 99999999999 9999999999999999999999999999999744 59999999986 788999999
Q ss_pred hcCCCcccccCchhhHHHHHhcCCCCccEEEEECCCCcEEEcc
Q 008336 412 KGMPWLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 412 ~~~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~ 454 (569)
+.++ +.+|+..+....+++.|++.++|+++|+|++|+++.+.
T Consensus 90 ~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 131 (145)
T 3erw_A 90 KANK-LTFPIVLDSKGELMKEYHIITIPTSFLLNEKGEIEKTK 131 (145)
T ss_dssp HHTT-CCSCEEECSSSHHHHHTTCCEESEEEEECTTCCEEEEE
T ss_pred HHcC-CceeEEEcCchhHHHhcCcCccCeEEEEcCCCcEEEEE
Confidence 9887 57888888888999999999999999999999999874
No 76
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.78 E-value=1.1e-18 Score=155.57 Aligned_cols=117 Identities=23% Similarity=0.354 Sum_probs=102.2
Q ss_pred ccccCccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCC-CCHHHHHHH
Q 008336 13 SLLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD-EDDEAFKGY 89 (569)
Q Consensus 13 ~~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d-~~~~~~~~~ 89 (569)
.++|.++|+| +.+.+|+.+++++++|| +||+||++||++|+.++|.|.++++++++.+ +.+++|+.+ ++.+.+++|
T Consensus 2 ~~~G~~~p~~~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~-~~vv~v~~~~~~~~~~~~~ 80 (153)
T 2l5o_A 2 SLDSKTAPAFSLPDLHGKTVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKN-FQVLAVAQPIDPIESVRQY 80 (153)
T ss_dssp --CCTTCCSCEEECTTSCEEEHHHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTT-EEEEEEECTTSCHHHHHHH
T ss_pred CCCCCCCCCcEeecCCCCCccHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCC-eEEEEEecCCCCHHHHHHH
Confidence 4689999999 56789999999999999 9999999999999999999999999998774 999999986 467889999
Q ss_pred HHhCCCcccccCCchhHHHHHHhcCCCCccEEEEECCCCcEEE
Q 008336 90 FSKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~ 132 (569)
+++++..+....+.. ..+.+.|++.++|+++++|++|+++.
T Consensus 81 ~~~~~~~~~~~~d~~--~~~~~~~~i~~~P~~~lid~~G~i~~ 121 (153)
T 2l5o_A 81 VKDYGLPFTVMYDAD--KAVGQAFGTQVYPTSVLIGKKGEILK 121 (153)
T ss_dssp HHHTTCCSEEEECSS--CHHHHHHTCCSSSEEEEECSSSCCCE
T ss_pred HHHcCCCceEEcCch--HHHHHHcCCCccCeEEEECCCCcEEE
Confidence 999987765555543 36889999999999999999999875
No 77
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.78 E-value=5e-19 Score=159.28 Aligned_cols=134 Identities=17% Similarity=0.231 Sum_probs=112.8
Q ss_pred CCcccee-cCCCCceecccCCCC-EEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhc
Q 008336 337 GDLDFVV-GKNGGKVPVSDLAGK-TILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKG 413 (569)
Q Consensus 337 ~~~~f~~-~~~g~~v~l~~~~gk-~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~ 413 (569)
..|+|.+ +.+|+.+++++++|| ++||+|| ++||++|+.++|.|.+++++++++ ++.|++|++| +.+.+++|+++
T Consensus 14 ~~p~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~--~~~vv~is~d-~~~~~~~~~~~ 90 (160)
T 1xvw_A 14 TAPDFTLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFEND--DSAALAISVG-PPPTHKIWATQ 90 (160)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSS--SEEEEEEESC-CHHHHHHHHHH
T ss_pred CCCCeEeEcCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHC--CcEEEEEeCC-CHHHHHHHHHh
Confidence 4589988 999999999999998 9999998 999999999999999999999754 6999999998 56788999998
Q ss_pred CCCcccccCchh--hHHHHHhcCCC----Ccc--EEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhh
Q 008336 414 MPWLALPFGDAR--KASLSRKFKVS----GIP--MLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEM 484 (569)
Q Consensus 414 ~~~~~~~~~~d~--~~~l~~~~~v~----~~P--t~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l 484 (569)
+++ .+|++.|. ...+++.|++. ++| +++|||++|+|+.+..+. ......++++.+.|+++
T Consensus 91 ~~~-~~~~~~d~~~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~i~~~~~g~----------~~~~~~~~~l~~~l~~l 158 (160)
T 1xvw_A 91 SGF-TFPLLSDFWPHGAVSQAYGVFNEQAGIANRGTFVVDRSGIIRFAEMKQ----------PGEVRDQRLWTDALAAL 158 (160)
T ss_dssp HTC-CSCEEECTTTTTHHHHHTTCEETTTTEECSEEEEECTTSBEEEEEECC----------TTCCCCHHHHHHHHHHT
T ss_pred cCC-CceEEecCCcChHHHHHcCCccccCCCeeeeEEEECCCCeEEEEEecC----------CCCCCCHHHHHHHHHHh
Confidence 874 78888874 78899999999 999 999999999999985432 11233566677776654
No 78
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.78 E-value=5.6e-19 Score=159.85 Aligned_cols=114 Identities=24% Similarity=0.432 Sum_probs=103.9
Q ss_pred ccccCccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCC----------
Q 008336 13 SLLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD---------- 80 (569)
Q Consensus 13 ~~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d---------- 80 (569)
..+|.++|+| +.+.+|+.+++++++|| +||+||++||++|+.++|.|.+++++++ ++.|++|++|
T Consensus 11 ~~~g~~~p~~~l~~~~g~~~~l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~---~v~vv~i~~d~~~~~~~~~~ 87 (165)
T 3ha9_A 11 EEVLEREASFSLTTIDGEVISLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR---EISVIAIDFWTAEALKALGL 87 (165)
T ss_dssp HHHHHHHHCCCEEBTTSCEECGGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT---TEEEEEEECCSHHHHHHHTC
T ss_pred ccccCcCCCCEeecCCCCEeeHHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC---CcEEEEEEeccccccccccc
Confidence 3679999999 66789999999999999 9999999999999999999999999987 4999999999
Q ss_pred --------CCHHHHHHHHHhCCC-cccccCCchhHHHHHHhcCCCCccEEEEECCCCcEEE
Q 008336 81 --------EDDEAFKGYFSKMPW-LAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 81 --------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~ 132 (569)
.+.+.+++|++++++ .+..+.+ ...+.+.|++.++|+++|||++|+++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d---~~~~~~~~~v~~~P~~~lid~~G~i~~ 145 (165)
T 3ha9_A 88 NKPGYPPPDTPEMFRKFIANYGDPSWIMVMD---DGSLVEKFNVRSIDYIVIMDKSSNVLY 145 (165)
T ss_dssp CSTTSCCCCCHHHHHHHHHHHSCTTSEEEEC---CSHHHHHTTCCSSSEEEEEETTCCEEE
T ss_pred ccccCCCCCCHHHHHHHHHHcCCCCeeEEeC---hHHHHHHhCCCCceEEEEEcCCCcEEE
Confidence 799999999999988 6655555 347999999999999999999999987
No 79
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.65 E-value=1.5e-20 Score=169.23 Aligned_cols=115 Identities=27% Similarity=0.450 Sum_probs=102.9
Q ss_pred CCcccee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHH-HHHHHh-hcCCCeEEEEEeCCCChhHHHHHHhc
Q 008336 337 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLID-AYKKIK-ERNESLEVVFISSDRDQTSFDEFFKG 413 (569)
Q Consensus 337 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~-l~~~~~-~~~~~~~vv~is~d~~~~~~~~~~~~ 413 (569)
..|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|.+ ++++++ .. ++.|++|++|.+.+.+++|.++
T Consensus 12 ~~p~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~--~~~vv~v~~d~~~~~~~~~~~~ 89 (159)
T 2ls5_A 12 MAPDFTITLTDGKQVTLSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNA--DFALIGIDRDEPLEKVLAFAKS 89 (159)
Confidence 3578887 89999999999999999999999999999999999998 888887 33 6999999999877788899888
Q ss_pred CCCcccccCchhhHHHHHhcC--CCCccEEEEECCCCcEEEcc
Q 008336 414 MPWLALPFGDARKASLSRKFK--VSGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 414 ~~~~~~~~~~d~~~~l~~~~~--v~~~Pt~~lid~~G~i~~~~ 454 (569)
++ +.+|++.|....+.+.|+ +.++|+++|||++|+++.+.
T Consensus 90 ~~-~~~~~~~d~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~ 131 (159)
T 2ls5_A 90 TG-VTYPLGLDPGADIFAKYALRDAGITRNVLIDREGKIVKLT 131 (159)
Confidence 87 588999898999999999 56699999999999999874
No 80
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.78 E-value=8.6e-19 Score=160.00 Aligned_cols=138 Identities=20% Similarity=0.294 Sum_probs=109.8
Q ss_pred CCcccee-cCCCCceecccCCCCEEEEEEecCCCh-hHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC---CChhHHHHHH
Q 008336 337 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCP-PCRAFLPKLIDAYKKIKERNESLEVVFISSD---RDQTSFDEFF 411 (569)
Q Consensus 337 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~-~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d---~~~~~~~~~~ 411 (569)
..|+|.+ +.+|+.+++++++||++||+||++||+ +|+.++|.|.+++++++++..++.||+|++| .+++.+++|+
T Consensus 12 ~~p~f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~ 91 (174)
T 1xzo_A 12 EVEPFTFQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFA 91 (174)
T ss_dssp ECCCCEEECTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHH
T ss_pred ccCCcEEEcCCCCEEehhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHH
Confidence 3589988 999999999999999999999999999 9999999999999999876335999999998 4678899999
Q ss_pred hcCCCccc---ccCchhhHHHHHh----------------cCCCCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHH
Q 008336 412 KGMPWLAL---PFGDARKASLSRK----------------FKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEE 472 (569)
Q Consensus 412 ~~~~~~~~---~~~~d~~~~l~~~----------------~~v~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~ 472 (569)
++++ +.+ +++.|.+..+.+. |++..+|+++|||++|+|+.+..+. . ..
T Consensus 92 ~~~~-~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~-------~-----~~ 158 (174)
T 1xzo_A 92 ANYP-LSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGV-------E-----NT 158 (174)
T ss_dssp TTSC-CCGGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESS-------S-----SC
T ss_pred HHcC-CCCcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCC-------C-----CC
Confidence 9887 344 6666655554443 3567899999999999999984321 1 11
Q ss_pred HHHHHHHHhhhhhcC
Q 008336 473 RMKEIDGQYNEMAKG 487 (569)
Q Consensus 473 ~~~~l~~~l~~l~~~ 487 (569)
..++|.+.|+++++.
T Consensus 159 ~~~~l~~~l~~ll~~ 173 (174)
T 1xzo_A 159 PYDDIISDVKSASTL 173 (174)
T ss_dssp CHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHhc
Confidence 245677777777653
No 81
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.78 E-value=1.8e-18 Score=156.24 Aligned_cols=116 Identities=21% Similarity=0.288 Sum_probs=104.0
Q ss_pred cccCccCCce--e-cCCCceeecCCCCCc-EEEEEec-CCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHH
Q 008336 14 LLSSSARDFL--I-RSNGDQVKLDSLKGK-IGLYFSA-SWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKG 88 (569)
Q Consensus 14 ~~g~~~pdf~--~-~~~g~~v~l~~~~gk-vlv~F~a-~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~ 88 (569)
.+|.++|+|. + +.+|+++++++++|| ++|+||+ +||++|+.++|.|.+++++|++++ +.|++|++| +.+.+++
T Consensus 8 ~~G~~~P~f~~~l~~~~G~~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~-~~vv~vs~d-~~~~~~~ 85 (163)
T 3gkn_A 8 VLELPAATFDLPLSLSGGTQTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAG-AKILGVSRD-SVKSHDN 85 (163)
T ss_dssp CCCCCGGGGGCCEECSTTCEECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTT-CEEEEEESS-CHHHHHH
T ss_pred ccCCcCCCccccccCCCCCEEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCC-CEEEEEeCC-CHHHHHH
Confidence 5799999996 5 579999999999999 9999998 999999999999999999999875 999999998 7889999
Q ss_pred HHHhCCCcccccCCchhHHHHHHhcCCCC------------ccEEEEECCCCcEEEc
Q 008336 89 YFSKMPWLAVPFSDSETRDKLDELFKVMG------------IPHLVILDENGKVLSD 133 (569)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~l~~~~~v~~------------~P~~~lid~~G~i~~~ 133 (569)
|+++++..+..+.|.. ..+.+.|++.. +|+++|||++|+|+..
T Consensus 86 ~~~~~~~~~~~~~d~~--~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~ 140 (163)
T 3gkn_A 86 FCAKQGFAFPLVSDGD--EALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQA 140 (163)
T ss_dssp HHHHHCCSSCEEECTT--CHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEE
T ss_pred HHHHhCCCceEEECCc--HHHHHHhCCccccccccccccCcceEEEEECCCCeEEEE
Confidence 9999887766666544 37889999987 9999999999999874
No 82
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.78 E-value=1.8e-18 Score=154.50 Aligned_cols=132 Identities=20% Similarity=0.330 Sum_probs=112.2
Q ss_pred CCcccee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeC--CCChhHHHHHHhc
Q 008336 337 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISS--DRDQTSFDEFFKG 413 (569)
Q Consensus 337 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~--d~~~~~~~~~~~~ 413 (569)
..|+|.+ +.+|+.+++++++ |++||+||++||++|+.++|.|.++++++ + +.|++|++ +.+.+.+++|+++
T Consensus 10 ~~p~f~l~~~~g~~~~l~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~---v~~v~v~~d~~~~~~~~~~~~~~ 83 (154)
T 3ia1_A 10 PLPDFLLLDPKGQPVTPATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET--G---VPFYVISREPRDTREVVLEYMKT 83 (154)
T ss_dssp ECCCCCEECTTSCEECTTTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH--C---CCEEEEECCTTCCHHHHHHHHTT
T ss_pred cCCceEEECCCCCEechHHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc--C---CeEEEEeCCCcccHHHHHHHHHH
Confidence 4588988 9999999999999 99999999999999999999999999999 3 89999999 5678899999999
Q ss_pred CCCcccccCch---hhHHHHHhcCCCCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhhcCCC
Q 008336 414 MPWLALPFGDA---RKASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWP 489 (569)
Q Consensus 414 ~~~~~~~~~~d---~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~~~~~ 489 (569)
++ +.+|+..+ ....+++.|++.++|+++|||++|+++.+..+. . ..++|.+.|+++....+
T Consensus 84 ~~-~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~-----------~---~~~~l~~~l~~~~~~~~ 147 (154)
T 3ia1_A 84 YP-RFIPLLASDRDRPHEVAARFKVLGQPWTFVVDREGKVVALFAGR-----------A---GREALLDALLLAGADLE 147 (154)
T ss_dssp CT-TEEECBCCSSCCHHHHHTTSSBCSSCEEEEECTTSEEEEEEESB-----------C---CHHHHHHHHHHTTCCC-
T ss_pred cC-CCcccccccccchHHHHHHhCCCcccEEEEECCCCCEEEEEcCC-----------C---CHHHHHHHHHhccCccc
Confidence 98 47787776 778999999999999999999999999884321 1 23567777777766554
No 83
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.78 E-value=2.1e-18 Score=159.71 Aligned_cols=117 Identities=12% Similarity=0.216 Sum_probs=103.9
Q ss_pred ccccCccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCC-------CCH
Q 008336 13 SLLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD-------EDD 83 (569)
Q Consensus 13 ~~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d-------~~~ 83 (569)
-.+|.++|+| +.+.+|+.+++++++|| +||+||++||++|+.++|.|.+++++++++ +.|++|++| ++.
T Consensus 7 ~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~--~~~v~v~~d~~~~~~~d~~ 84 (188)
T 2cvb_A 7 LPLESPLIDAELPDPRGGRYRLSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK--VAFVGINANDYEKYPEDAP 84 (188)
T ss_dssp CCTTCBCCCCEEECTTSCEEEGGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT--EEEEEEECCCTTTCGGGSH
T ss_pred CCCCCCCCCceeecCCCCEEeHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC--eEEEEEEcCccccccccCH
Confidence 3579999999 56789999999999999 999999999999999999999999999864 999999996 477
Q ss_pred HHHHHHHHhCCCcccccCCchhHHHHHHhcCCCCccEEEEECCCCcEEEc
Q 008336 84 EAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 133 (569)
+.+++|++++++.+..+.+.. ..+.+.|++.++|+++|||++|+++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 132 (188)
T 2cvb_A 85 EKMAAFAEEHGIFFPYLLDET--QEVAKAYRALRTPEVFLFDERRLLRYH 132 (188)
T ss_dssp HHHHHHHHHHTCCSCEEECSS--SHHHHHTTCCEESEEEEECTTCBEEEE
T ss_pred HHHHHHHHHhCCCceEEECCc--chHHHHcCCCCCCeEEEECCCCcEEEE
Confidence 899999999887666555544 368899999999999999999999986
No 84
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.78 E-value=9.5e-19 Score=154.85 Aligned_cols=133 Identities=18% Similarity=0.221 Sum_probs=111.9
Q ss_pred CCcccee---cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC-----ChhHHH
Q 008336 337 GDLDFVV---GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR-----DQTSFD 408 (569)
Q Consensus 337 ~~~~f~~---~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~-----~~~~~~ 408 (569)
..|+|.+ +.+|+.+++++++||+++|+||++||++|+.++|.|.+++++++++ +.+++|++|. +.+.++
T Consensus 6 ~~P~f~~~~~~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~---~~~~~v~~~~~~~~~~~~~~~ 82 (148)
T 2b5x_A 6 PMPELTGEKAWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ---LNVVAVHMPRSEDDLDPGKIK 82 (148)
T ss_dssp BCCCCCCCSEEESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---SEEEEEECCCSTTTSSHHHHH
T ss_pred CCCCCccccccccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC---cEEEEEEcCCCccccCHHHHH
Confidence 3577765 6799999999999999999999999999999999999999999764 9999999886 678899
Q ss_pred HHHhcCCCcccccCchhhHHHHHhcCCCCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhhcC
Q 008336 409 EFFKGMPWLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKG 487 (569)
Q Consensus 409 ~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~~~ 487 (569)
+++++++ +.+|+..+....+++.|+|.++|+++++|++|+++.+..+. . ..++|.+.|+++++.
T Consensus 83 ~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~-----------~---~~~~l~~~l~~~l~~ 146 (148)
T 2b5x_A 83 ETAAEHD-ITQPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGG-----------S---GMKMLEKRVNRVLAE 146 (148)
T ss_dssp HHHHHTT-CCSCEEECSSCHHHHHTCCCCSSEEEEECTTCBEEEEEESC-----------S---TTHHHHHHHHHHHTT
T ss_pred HHHHHcC-CCcceEECCchhHHHHhCCCCCCEEEEECCCCcEEEEecCC-----------C---CHHHHHHHHHHHHhc
Confidence 9999887 57888888888999999999999999999999999874321 1 124566667766643
No 85
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.77 E-value=2.2e-18 Score=156.79 Aligned_cols=116 Identities=22% Similarity=0.351 Sum_probs=99.9
Q ss_pred cccee-cCCCCceecccCCCCEEEEEEecCCChh-HHhhhHHHHHHHHHHhhc--CCCeEEEEEeCCC---ChhHHHHHH
Q 008336 339 LDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPP-CRAFLPKLIDAYKKIKER--NESLEVVFISSDR---DQTSFDEFF 411 (569)
Q Consensus 339 ~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~-C~~~~~~l~~l~~~~~~~--~~~~~vv~is~d~---~~~~~~~~~ 411 (569)
|+|.+ +.+|+.+++++++||++||+||++||++ |+.++|.|+++++++++. ..++.||+|++|. +++.+++|+
T Consensus 7 p~f~l~~~~G~~~~l~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~ 86 (171)
T 2rli_A 7 GDFHLLDHRGRARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYV 86 (171)
T ss_dssp SCCEEEETTSCEEETTTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHH
T ss_pred CCeEEEeCCCCEEeHHHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHH
Confidence 88988 9999999999999999999999999998 999999999999999752 2369999999983 578899999
Q ss_pred hcCCCcccccCc---hhhHHHHHhcCCCCcc---------------EEEEECCCCcEEEccc
Q 008336 412 KGMPWLALPFGD---ARKASLSRKFKVSGIP---------------MLVAIGPSGRTITKEA 455 (569)
Q Consensus 412 ~~~~~~~~~~~~---d~~~~l~~~~~v~~~P---------------t~~lid~~G~i~~~~~ 455 (569)
++++ +.++++. +....+++.|+|..+| +++|||++|+|+.+..
T Consensus 87 ~~~~-~~~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~ 147 (171)
T 2rli_A 87 QDFH-PRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYG 147 (171)
T ss_dssp HTTC-TTCCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEE
T ss_pred HHcC-CCeEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEEC
Confidence 9886 4555544 3445789999999888 9999999999999843
No 86
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.77 E-value=1.6e-18 Score=153.46 Aligned_cols=115 Identities=19% Similarity=0.263 Sum_probs=101.6
Q ss_pred ccCccCCce---ecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCC-----CHHH
Q 008336 15 LSSSARDFL---IRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDE-----DDEA 85 (569)
Q Consensus 15 ~g~~~pdf~---~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~-----~~~~ 85 (569)
+|.++|+|. .+.+|+.+++++++|| ++|+||++||++|+.++|.|.+++++++++ +.+++|+++. +.+.
T Consensus 3 ~g~~~P~f~~~~~~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~~~v~~~~~~~~~~~~~ 80 (148)
T 2b5x_A 3 LRQPMPELTGEKAWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ--LNVVAVHMPRSEDDLDPGK 80 (148)
T ss_dssp TTCBCCCCCCCSEEESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT--SEEEEEECCCSTTTSSHHH
T ss_pred CCCCCCCCccccccccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC--cEEEEEEcCCCccccCHHH
Confidence 699999994 3679999999999999 999999999999999999999999999754 9999999886 7889
Q ss_pred HHHHHHhCCCcccccCCchhHHHHHHhcCCCCccEEEEECCCCcEEEc
Q 008336 86 FKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 133 (569)
+++|++++++.+..+.+.. ..+.+.|++.++|+++++|++|+++..
T Consensus 81 ~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 126 (148)
T 2b5x_A 81 IKETAAEHDITQPIFVDSD--HALTDAFENEYVPAYYVFDKTGQLRHF 126 (148)
T ss_dssp HHHHHHHTTCCSCEEECSS--CHHHHHTCCCCSSEEEEECTTCBEEEE
T ss_pred HHHHHHHcCCCcceEECCc--hhHHHHhCCCCCCEEEEECCCCcEEEE
Confidence 9999999987665555443 368899999999999999999999874
No 87
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.77 E-value=1.1e-18 Score=162.71 Aligned_cols=145 Identities=12% Similarity=0.219 Sum_probs=116.0
Q ss_pred CCcccee--cCCCCceecccCCCC-EEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC-------CChhH
Q 008336 337 GDLDFVV--GKNGGKVPVSDLAGK-TILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSD-------RDQTS 406 (569)
Q Consensus 337 ~~~~f~~--~~~g~~v~l~~~~gk-~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d-------~~~~~ 406 (569)
..|+|.+ +.+|+.+++++++|| ++||+||++||++|+.++|.|++++++++++ ++.|++|++| .+.+.
T Consensus 23 ~~p~f~l~~~~~G~~~~l~~~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~v~~d~~~~~~~d~~~~ 100 (196)
T 2ywi_A 23 QAPPFALTNVIDGNVVRLEDVKSDAATVIMFICNHCPFVKHVQHELVRLANDYMPK--GVSFVAINSNDAEQYPEDSPEN 100 (196)
T ss_dssp BCCCCEEEETTTCCEEEHHHHCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGG--TCEEEEEECSCTTTCGGGSHHH
T ss_pred cCCceeeeecCCCCEEeHHHhCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhC--CcEEEEEECCccccccccCHHH
Confidence 3578865 689999999999998 5999999999999999999999999999875 6999999997 46788
Q ss_pred HHHHHhcCCCcccccCchhhHHHHHhcCCCCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhhc
Q 008336 407 FDEFFKGMPWLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAK 486 (569)
Q Consensus 407 ~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~~ 486 (569)
+++|+++++ +.+|+..|....+++.|++.++|+++|||++|++++++....... | + ......++|.+.|+++++
T Consensus 101 ~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~-~---~-~g~~~~~~l~~~i~~ll~ 174 (196)
T 2ywi_A 101 MKKVAEELG-YPFPYLYDETQEVAKAYDAACTPDFYIFDRDLKCVYRGQLDDSRP-N---N-GIPVTGESIRAALDALLE 174 (196)
T ss_dssp HHHHHHHHT-CCSCEEECSSCHHHHHHTCCEESEEEEEETTCBEEEEECSSSCCT-T---T-CCCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHcC-CCceEEECCchHHHHHhCCCCCCeEEEEcCCCeEEEccccCcccc-c---c-cCccCHHHHHHHHHHHHc
Confidence 999999887 578888888889999999999999999999999998843211000 0 0 001123567777777776
Q ss_pred CCC
Q 008336 487 GWP 489 (569)
Q Consensus 487 ~~~ 489 (569)
+.+
T Consensus 175 ~~~ 177 (196)
T 2ywi_A 175 GRP 177 (196)
T ss_dssp TCC
T ss_pred CCC
Confidence 544
No 88
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.77 E-value=5.3e-18 Score=147.60 Aligned_cols=111 Identities=24% Similarity=0.418 Sum_probs=99.1
Q ss_pred cCccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhC
Q 008336 16 SSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKM 93 (569)
Q Consensus 16 g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~ 93 (569)
|.++|+| +.+.+|+.+++++++|| ++|+||++||++|+.++|.|.+++++++ ++.++.|+++.+.+.+++|++++
T Consensus 2 ~~~~p~~~~~~~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~ 78 (136)
T 1zzo_A 2 VPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP---EVTFVGVAGLDQVPAMQEFVNKY 78 (136)
T ss_dssp CCGGGCCEEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSCHHHHHHHHHHT
T ss_pred CCCCCCcccccCCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC---CeEEEEEeCCCCHHHHHHHHHHc
Confidence 6789999 56789999999999999 9999999999999999999999999986 49999999999999999999999
Q ss_pred CC-cccccCCchhHHHHHHhcCCCCccEEEEECCCCcEE
Q 008336 94 PW-LAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVL 131 (569)
Q Consensus 94 ~~-~~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~ 131 (569)
++ .+..+.+.. ..+.+.|++.++|+++++|++|+++
T Consensus 79 ~~~~~~~~~d~~--~~~~~~~~i~~~P~~~~id~~g~i~ 115 (136)
T 1zzo_A 79 PVKTFTQLADTD--GSVWANFGVTQQPAYAFVDPHGNVD 115 (136)
T ss_dssp TCTTSEEEECTT--CHHHHHTTCCSSSEEEEECTTCCEE
T ss_pred CCCceEEEEcCC--cHHHHHcCCCCCceEEEECCCCCEE
Confidence 88 544444433 4688999999999999999999987
No 89
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.77 E-value=1.8e-18 Score=158.95 Aligned_cols=121 Identities=18% Similarity=0.178 Sum_probs=96.6
Q ss_pred cccccCccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCC-------C
Q 008336 12 QSLLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDE-------D 82 (569)
Q Consensus 12 ~~~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~-------~ 82 (569)
.+..|.++|+| +.+.+|+.+++++++|| +||+|||+|||+|+.++|.|.+++++|++++ +.|++|++|. +
T Consensus 11 ~~~~~~~~p~f~l~d~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~-~~vi~is~d~~~~~~~d~ 89 (180)
T 3kij_A 11 LKPKINSFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSH-FSVLAFPCNQFGESEPRP 89 (180)
T ss_dssp CCCCCCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTS-EEEEEEECCCSTTCCCSC
T ss_pred hcCCcCcccceEEecCCCCEecHHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCC-eEEEEEECCccccCCCCC
Confidence 44679999999 66789999999999999 9999999999999999999999999999875 9999999875 8
Q ss_pred HHHHHHHHHh-CCCcccccCC----chhHHHHHHhc--CCCCccE----EEEECCCCcEEEc
Q 008336 83 DEAFKGYFSK-MPWLAVPFSD----SETRDKLDELF--KVMGIPH----LVILDENGKVLSD 133 (569)
Q Consensus 83 ~~~~~~~~~~-~~~~~~~~~~----~~~~~~l~~~~--~v~~~P~----~~lid~~G~i~~~ 133 (569)
.+.+++|+++ ++..+..+.+ ......+...+ .+.++|+ ++|||++|+|+..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~ 151 (180)
T 3kij_A 90 SKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKF 151 (180)
T ss_dssp HHHHHHHHHHHHCCCSCBBCCCCCSSTTCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEE
T ss_pred HHHHHHHHHHhcCCCCceeeeeeccCccccHHHHHHHhcCCCCccccceEEEECCCCCEEEE
Confidence 8999999998 7766554321 11111111111 1246788 9999999999875
No 90
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.77 E-value=9.2e-19 Score=165.88 Aligned_cols=137 Identities=16% Similarity=0.197 Sum_probs=112.9
Q ss_pred cCCcccee-cC--CC--CceecccC-CCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHH
Q 008336 336 SGDLDFVV-GK--NG--GKVPVSDL-AGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFD 408 (569)
Q Consensus 336 ~~~~~f~~-~~--~g--~~v~l~~~-~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~ 408 (569)
...|+|.+ +. +| +.++++++ +||++||+|| ++||++|+.++|.|++++++|+++ +++||+|++| +.+..+
T Consensus 29 ~~aP~F~l~~~~~~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~--~v~vv~Is~D-~~~~~~ 105 (221)
T 2c0d_A 29 KKAYNFTAQGLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENK--NVELLGISVD-SVYSHL 105 (221)
T ss_dssp SBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHT--TEEEEEEESS-CHHHHH
T ss_pred CCCCCeEEeccccCCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC--CCEEEEEeCC-CHHHHH
Confidence 34689988 77 89 99999999 9999999999 999999999999999999999865 6999999997 456788
Q ss_pred HHHhcCC------CcccccCchhhHHHHHhcCC-----CCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHH
Q 008336 409 EFFKGMP------WLALPFGDARKASLSRKFKV-----SGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEI 477 (569)
Q Consensus 409 ~~~~~~~------~~~~~~~~d~~~~l~~~~~v-----~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l 477 (569)
+|++.+. .+.+|++.|....+++.|++ ..+|++||||++|+|+++..+.. ..+...+++
T Consensus 106 ~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~----------~~~~~~~el 175 (221)
T 2c0d_A 106 AWKNMPIEKGGIGNVEFTLVSDINKDISKNYNVLYDNSFALRGLFIIDKNGCVRHQTVNDL----------PIGRNVQEV 175 (221)
T ss_dssp HHHHSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECEEEEEECTTSBEEEEEEECT----------TCCCCHHHH
T ss_pred HHHHHhhhhcCccCCceEEEECCchHHHHHcCCcccCCCccceEEEECCCCeEEEEEecCC----------CCCCCHHHH
Confidence 8988771 46788888888899999999 47999999999999999853321 012344566
Q ss_pred HHHhhhhh
Q 008336 478 DGQYNEMA 485 (569)
Q Consensus 478 ~~~l~~l~ 485 (569)
.+.|+.+.
T Consensus 176 l~~l~~L~ 183 (221)
T 2c0d_A 176 LRTIDSII 183 (221)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 66666654
No 91
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.77 E-value=5.8e-18 Score=147.51 Aligned_cols=110 Identities=21% Similarity=0.323 Sum_probs=99.3
Q ss_pred CccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCC
Q 008336 17 SSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMP 94 (569)
Q Consensus 17 ~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~ 94 (569)
.++|+| +.+.+|+.+++++++|| ++|+||++||++|+.++|.|.+++++++ ++.++.|+++.+.+.+++|+++++
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~ 78 (136)
T 1lu4_A 2 DERLQFTATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP---AVTFVGIATRADVGAMQSFVSKYN 78 (136)
T ss_dssp GGGGCCEEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSCHHHHHHHHHHHT
T ss_pred CCCCCeEeecCCCCeecHHHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC---CcEEEEEEcCCCHHHHHHHHHHcC
Confidence 468999 56789999999999999 9999999999999999999999999986 499999999999999999999998
Q ss_pred CcccccCCchhHHHHHHhcCCCCccEEEEECCCCcEE
Q 008336 95 WLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVL 131 (569)
Q Consensus 95 ~~~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~ 131 (569)
+.+..+.+.. ..+.+.|++.++|+++++|++|+++
T Consensus 79 ~~~~~~~d~~--~~~~~~~~i~~~P~~~lid~~G~i~ 113 (136)
T 1lu4_A 79 LNFTNLNDAD--GVIWARYNVPWQPAFVFYRADGTST 113 (136)
T ss_dssp CCSEEEECTT--SHHHHHTTCCSSSEEEEECTTSCEE
T ss_pred CCceEEECCc--hhHHHhcCCCCCCEEEEECCCCcEE
Confidence 8766655544 3688999999999999999999997
No 92
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.77 E-value=2e-18 Score=155.11 Aligned_cols=115 Identities=22% Similarity=0.409 Sum_probs=101.0
Q ss_pred ccccCccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHH
Q 008336 13 SLLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYF 90 (569)
Q Consensus 13 ~~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~ 90 (569)
..+|.++|+| +.+.+|+.+++++++|| ++|+||++||++|+.++|.|.++++++++. ++.+++|+.|. .+++++
T Consensus 15 ~~~G~~~p~f~l~~~~g~~~~l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~v~v~~d~---~~~~~~ 90 (158)
T 3hdc_A 15 VRTGALAPNFKLPTLSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKG-DLVVLAVNVEK---RFPEKY 90 (158)
T ss_dssp CCTTSBCCCCEEECTTSCEEESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTT-SEEEEEEECSS---SCCGGG
T ss_pred cCCCCcCCCceeEcCCCCEEehHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccC-CeEEEEEeCCH---HHHHHH
Confidence 3579999999 66789999999999999 999999999999999999999999999876 49999999987 466778
Q ss_pred HhCCCcccccCCchhHHHHHHhcCCCCccEEEEECCCCcEEEc
Q 008336 91 SKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 133 (569)
+++++.+..+.+.. ..+.+.|++.++|+++|+|++|+++..
T Consensus 91 ~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 131 (158)
T 3hdc_A 91 RRAPVSFNFLSDAT--GQVQQRYGANRLPDTFIVDRKGIIRQR 131 (158)
T ss_dssp GGCCCSCEEEECTT--SHHHHHTTCCSSSEEEEECTTSBEEEE
T ss_pred HHcCCCceEEECch--HHHHHHhCCCCcceEEEEcCCCCEEEE
Confidence 88887766555544 368999999999999999999999874
No 93
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.77 E-value=1.7e-18 Score=160.83 Aligned_cols=136 Identities=21% Similarity=0.249 Sum_probs=115.0
Q ss_pred CCcccee-cC--CC--CceecccC-CCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHH
Q 008336 337 GDLDFVV-GK--NG--GKVPVSDL-AGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDE 409 (569)
Q Consensus 337 ~~~~f~~-~~--~g--~~v~l~~~-~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~ 409 (569)
..|+|.+ +. +| +.++++++ +||++||+|| ++||++|+.++|.|.+++++++++ ++.||+|++| +.+..++
T Consensus 5 ~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~--~v~vv~Is~d-~~~~~~~ 81 (192)
T 2h01_A 5 QAPSFKAEAVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKER--NVELLGCSVD-SKFTHLA 81 (192)
T ss_dssp BCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHT--TEEEEEEESS-CHHHHHH
T ss_pred cCCCcEeEeeecCCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEEeC-CHHHHHH
Confidence 4589988 77 89 99999999 9999999999 999999999999999999999865 6999999998 4578888
Q ss_pred HHhcCC------CcccccCchhhHHHHHhcCCC-----CccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHH
Q 008336 410 FFKGMP------WLALPFGDARKASLSRKFKVS-----GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEID 478 (569)
Q Consensus 410 ~~~~~~------~~~~~~~~d~~~~l~~~~~v~-----~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~ 478 (569)
|.+.+. .+.+|++.|....+++.|++. .+|+++|||++|+|+++..+.. ..+...+++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~----------~~~~~~~~l~ 151 (192)
T 2h01_A 82 WKKTPLSQGGIGNIKHTLISDISKSIARSYDVLFNESVALRAFVLIDKQGVVQHLLVNNL----------ALGRSVDEIL 151 (192)
T ss_dssp HHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECCEEEEECTTSBEEEEEEGGG----------SSGGGHHHHH
T ss_pred HHHhHHhhCCccCCCcCeEECCcHHHHHHhCCcCcCCceeeEEEEEcCCCEEEEEEeCCC----------CCCCCHHHHH
Confidence 988772 477898888888999999999 8999999999999999854321 1234566777
Q ss_pred HHhhhhh
Q 008336 479 GQYNEMA 485 (569)
Q Consensus 479 ~~l~~l~ 485 (569)
+.|+.+.
T Consensus 152 ~~l~~l~ 158 (192)
T 2h01_A 152 RLIDALQ 158 (192)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7777665
No 94
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.77 E-value=1.1e-18 Score=156.78 Aligned_cols=113 Identities=19% Similarity=0.431 Sum_probs=100.9
Q ss_pred CCcccee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCC
Q 008336 337 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMP 415 (569)
Q Consensus 337 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~ 415 (569)
..|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|.++++++++. ++.++.|+.|. .+++++++++
T Consensus 20 ~~p~f~l~~~~g~~~~l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~--~~~~v~v~~d~---~~~~~~~~~~ 94 (158)
T 3hdc_A 20 LAPNFKLPTLSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKG--DLVVLAVNVEK---RFPEKYRRAP 94 (158)
T ss_dssp BCCCCEEECTTSCEEESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTT--SEEEEEEECSS---SCCGGGGGCC
T ss_pred cCCCceeEcCCCCEEehHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccC--CeEEEEEeCCH---HHHHHHHHcC
Confidence 4589988 9999999999999999999999999999999999999999999854 69999999986 4556777776
Q ss_pred CcccccCchhhHHHHHhcCCCCccEEEEECCCCcEEEccc
Q 008336 416 WLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKEA 455 (569)
Q Consensus 416 ~~~~~~~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~ 455 (569)
+.+++..|....+++.|+|.++|+++|||++|+|+.+..
T Consensus 95 -~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~ 133 (158)
T 3hdc_A 95 -VSFNFLSDATGQVQQRYGANRLPDTFIVDRKGIIRQRVT 133 (158)
T ss_dssp -CSCEEEECTTSHHHHHTTCCSSSEEEEECTTSBEEEEEE
T ss_pred -CCceEEECchHHHHHHhCCCCcceEEEEcCCCCEEEEEe
Confidence 568888888889999999999999999999999999854
No 95
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.76 E-value=6.9e-19 Score=160.36 Aligned_cols=114 Identities=17% Similarity=0.272 Sum_probs=86.0
Q ss_pred CCcccee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC-------CChhHHH
Q 008336 337 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSD-------RDQTSFD 408 (569)
Q Consensus 337 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d-------~~~~~~~ 408 (569)
..|+|.+ +.+|+++++++++||++||+||++||++|+ ++|.|++++++++++ ++.|++|++| .+.+.++
T Consensus 11 ~~~~f~l~d~~G~~~~l~~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~--~v~vv~vs~d~~~~~~~d~~~~~~ 87 (171)
T 3cmi_A 11 EFYKLAPVDKKGQPFPFDQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDE--GFTIIGFPCNQFGHQEPGSDEEIA 87 (171)
T ss_dssp GGGGCCCBBTTSCBCCGGGGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGG--TEEEEEEEECSCC-----------
T ss_pred heeeeEEEcCCCCEecHHHcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhccC--CeEEEEEECcccCCCCCCCHHHHH
Confidence 3588988 999999999999999999999999999999 999999999999876 6999999986 4556788
Q ss_pred HHH-hcCCCcccccCchhh--HH----H-----HHhcCCCCcc------EEEEECCCCcEEEcc
Q 008336 409 EFF-KGMPWLALPFGDARK--AS----L-----SRKFKVSGIP------MLVAIGPSGRTITKE 454 (569)
Q Consensus 409 ~~~-~~~~~~~~~~~~d~~--~~----l-----~~~~~v~~~P------t~~lid~~G~i~~~~ 454 (569)
+|+ ++++ +.+|++.|.+ .. + .+.|++.++| +++|||++|+|+.+.
T Consensus 88 ~~~~~~~~-~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~ 150 (171)
T 3cmi_A 88 QFCQLNYG-VTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERY 150 (171)
T ss_dssp -------C-CCSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEE
T ss_pred HHHHhccC-CCceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEe
Confidence 888 7665 5677665321 11 1 2468999999 999999999999984
No 96
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.76 E-value=3.4e-18 Score=160.67 Aligned_cols=116 Identities=16% Similarity=0.173 Sum_probs=92.8
Q ss_pred CCcccee-cCC-CCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC-------ChhHH
Q 008336 337 GDLDFVV-GKN-GGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR-------DQTSF 407 (569)
Q Consensus 337 ~~~~f~~-~~~-g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~-------~~~~~ 407 (569)
..|+|.+ +.+ |+.+++++++||+|||+|||+|||+|+.++|.|++++++++++ ++.||+|++|. +.+.+
T Consensus 25 ~~p~f~l~~~~~G~~v~l~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~--g~~vv~v~~d~~~~~e~d~~~~i 102 (208)
T 2f8a_A 25 SVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPR--GLVVLGFPCNQFGHQENAKNEEI 102 (208)
T ss_dssp CGGGCEECBTTCSSCEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCCSTTTTCSCHHHH
T ss_pred ccCceEeeeCCCCCCccHHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccCC--CeEEEEEECCcccccCCCCHHHH
Confidence 4588988 888 9999999999999999999999999999999999999999876 69999999872 45778
Q ss_pred HHHHh------cCCCcccccCchh--h----H----HHHHhc-------------------------CCCCccEEEEECC
Q 008336 408 DEFFK------GMPWLALPFGDAR--K----A----SLSRKF-------------------------KVSGIPMLVAIGP 446 (569)
Q Consensus 408 ~~~~~------~~~~~~~~~~~d~--~----~----~l~~~~-------------------------~v~~~Pt~~lid~ 446 (569)
++|++ +++ +.||++.+. + . .+...+ ++..+|++||||+
T Consensus 103 ~~f~~~~~~~~~~~-~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID~ 181 (208)
T 2f8a_A 103 LNSLKYVRPGGGFE-PNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGP 181 (208)
T ss_dssp HHHHHHTSSCTTCC-CSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEECT
T ss_pred HHHHHhcccccccc-cceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEEcC
Confidence 88987 554 567765321 0 0 111111 3667799999999
Q ss_pred CCcEEEccc
Q 008336 447 SGRTITKEA 455 (569)
Q Consensus 447 ~G~i~~~~~ 455 (569)
+|+|+.+..
T Consensus 182 ~G~i~~~~~ 190 (208)
T 2f8a_A 182 DGVPLRRYS 190 (208)
T ss_dssp TSCEEEEEC
T ss_pred CCcEEEEeC
Confidence 999999853
No 97
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.76 E-value=4.1e-18 Score=153.26 Aligned_cols=119 Identities=20% Similarity=0.259 Sum_probs=103.8
Q ss_pred ccccCccCCc-eecCCCceeecCCCCCc--EEEEEe-cCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHH
Q 008336 13 SLLSSSARDF-LIRSNGDQVKLDSLKGK--IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKG 88 (569)
Q Consensus 13 ~~~g~~~pdf-~~~~~g~~v~l~~~~gk--vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~ 88 (569)
-.+|.++|+| +.+.+|+.+++++++|| ++|+|| ++||++|+.++|.|.++++++++.+ +.|++|++| +.+.+++
T Consensus 9 ~~~G~~~p~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~-~~vv~is~d-~~~~~~~ 86 (160)
T 1xvw_A 9 LNVGATAPDFTLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDD-SAALAISVG-PPPTHKI 86 (160)
T ss_dssp CCTTSBCCCCEEECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSS-EEEEEEESC-CHHHHHH
T ss_pred CCCCCCCCCeEeEcCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCC-cEEEEEeCC-CHHHHHH
Confidence 4579999999 56789999999999997 999998 9999999999999999999998764 999999998 5788999
Q ss_pred HHHhCCCcccccCCchhHHHHHHhcCCC----Ccc--EEEEECCCCcEEEc
Q 008336 89 YFSKMPWLAVPFSDSETRDKLDELFKVM----GIP--HLVILDENGKVLSD 133 (569)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~l~~~~~v~----~~P--~~~lid~~G~i~~~ 133 (569)
|++++++.+..+.+......+.+.|++. ++| +++|+|++|+|+..
T Consensus 87 ~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~i~~~ 137 (160)
T 1xvw_A 87 WATQSGFTFPLLSDFWPHGAVSQAYGVFNEQAGIANRGTFVVDRSGIIRFA 137 (160)
T ss_dssp HHHHHTCCSCEEECTTTTTHHHHHTTCEETTTTEECSEEEEECTTSBEEEE
T ss_pred HHHhcCCCceEEecCCcChHHHHHcCCccccCCCeeeeEEEECCCCeEEEE
Confidence 9999988766666641234688999998 999 99999999999875
No 98
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.76 E-value=2.9e-18 Score=155.65 Aligned_cols=119 Identities=18% Similarity=0.219 Sum_probs=94.9
Q ss_pred cccCccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCC-------CHH
Q 008336 14 LLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDE-------DDE 84 (569)
Q Consensus 14 ~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~-------~~~ 84 (569)
.+|.++|+| +.+.+|+.+++++++|| +||+||++||++|+.++|.|++++++|++++ +.|++|++|. +.+
T Consensus 6 ~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~-~~vv~v~~d~~~~~~~~~~~ 84 (169)
T 2v1m_A 6 KSWNSIYEFTVKDINGVDVSLEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKG-LRILAFPCNQFGGQEPWAEA 84 (169)
T ss_dssp -CCCSGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT-EEEEEEECCCSTTCCCSCHH
T ss_pred cCCcccccceeecCCCCCccHHHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCC-eEEEEEECCccCCCCCCCHH
Confidence 479999999 56789999999999999 9999999999999999999999999998875 9999999873 578
Q ss_pred HHHHH-HHhCCCcccccC--CchhH--HHHH-----HhcC-----CCCccEEEEECCCCcEEEc
Q 008336 85 AFKGY-FSKMPWLAVPFS--DSETR--DKLD-----ELFK-----VMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 85 ~~~~~-~~~~~~~~~~~~--~~~~~--~~l~-----~~~~-----v~~~P~~~lid~~G~i~~~ 133 (569)
.+++| .++++..+..+. +.... ..+. ..++ +.++|+++|||++|+++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~ 148 (169)
T 2v1m_A 85 EIKKFVTEKYGVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKR 148 (169)
T ss_dssp HHHHHHHHHHCCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEE
T ss_pred HHHHHHHHhcCCCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEE
Confidence 88999 488776555443 22211 1111 1125 5567999999999999875
No 99
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.76 E-value=1.4e-18 Score=156.94 Aligned_cols=133 Identities=13% Similarity=0.087 Sum_probs=108.7
Q ss_pred CCcccee-cCCCCceecccCCCCEEEEEEec-CCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcC
Q 008336 337 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSA-HWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGM 414 (569)
Q Consensus 337 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a-~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~ 414 (569)
..|+|.+ +.+|+.+++++++||++||+||+ +||++|+.++|.|+++++++ . ++.|++|++|. ++..++|.+++
T Consensus 21 ~~P~f~l~~~~G~~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~---~v~vv~is~d~-~~~~~~~~~~~ 95 (163)
T 1psq_A 21 KALDFSLTTTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-D---NTVVLTVSMDL-PFAQKRWCGAE 95 (163)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T---TEEEEEEESSC-HHHHHHHHHHH
T ss_pred CCCCEEEEcCCCcEeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-C---CcEEEEEECCC-HHHHHHHHHhc
Confidence 4589988 99999999999999999999995 99999999999999999988 3 59999999984 57788898887
Q ss_pred CCcccccCch-hhHHHHHhcCCC----C--ccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhh
Q 008336 415 PWLALPFGDA-RKASLSRKFKVS----G--IPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNE 483 (569)
Q Consensus 415 ~~~~~~~~~d-~~~~l~~~~~v~----~--~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~ 483 (569)
+.-.+|++.| ....+++.|++. + .|+++|||++|+|+++..+.. +....+.+++.+.|++
T Consensus 96 ~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~g~~---------~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 96 GLDNAIMLSDYFDHSFGRDYALLINEWHLLARAVFVLDTDNTIRYVEYVDN---------INSEPNFEAAIAAAKA 162 (163)
T ss_dssp TCTTSEEEECTTTCHHHHHHTCBCTTTCSBCCEEEEECTTCBEEEEEECSB---------TTSCCCHHHHHHHHHH
T ss_pred CCCCcEEecCCchhHHHHHhCCccccCCceEEEEEEEcCCCeEEEEEecCC---------cCCCCCHHHHHHHHHh
Confidence 7327888888 788999999997 4 399999999999999864321 1233345566666654
No 100
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.76 E-value=1.4e-17 Score=160.46 Aligned_cols=179 Identities=16% Similarity=0.202 Sum_probs=116.7
Q ss_pred cEEEEEEecCC--cccchhhhHHHHHHHHHHhc-CCCceEEEEeeccccHHHHHHHhcCCCcccccCCchhHHHHHhhcc
Q 008336 198 KTIGLYFSMSS--YKASAEFTPRLVEVYEKLKG-KGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLARYFE 274 (569)
Q Consensus 198 k~v~l~f~~~~--~~~c~~~~~~~~~~~~~~~~-~~~~~ei~~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~f~ 274 (569)
++|.+.|+++| |++|+.+.+.+.++++.... ++.+ .+.|+.+|.++ .+.+++.|+
T Consensus 26 ~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~-~v~~~~vd~d~---------------------~~~~~~~~g 83 (243)
T 2hls_A 26 NPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGK-LLKLNVYYRES---------------------DSDKFSEFK 83 (243)
T ss_dssp SCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEE-SEEEEEEETTT---------------------THHHHHHTT
T ss_pred CCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCc-eeEEEEecCCc---------------------CHHHHHhcC
Confidence 46777788888 99999999999998876421 2211 13344444332 457899999
Q ss_pred cCCCceEEEECCCCCchhhhhHHHHHhhCCCCCCCChHHHHHHHHHHHHHHhh-hhhhhhhccCCccceecCCCCceecc
Q 008336 275 LSTLPTLVIIGPDGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEES-QTLESVLVSGDLDFVVGKNGGKVPVS 353 (569)
Q Consensus 275 v~~~Ptlvi~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~f~~~~~g~~v~l~ 353 (569)
|+++||+++++ | .. ...|.. +...+..+.......... ..+.. + ..-.+.
T Consensus 84 v~~~Pt~~i~~--g-~~--------~~~G~~----~~~~l~~fv~~~l~~~~~~~~l~~-------~-------~~~~~~ 134 (243)
T 2hls_A 84 VERVPTVAFLG--G-EV--------RWTGIP----AGEEIRALVEVIMRLSEDESGLED-------A-------TKEALK 134 (243)
T ss_dssp CCSSSEEEETT--T-TE--------EEESCC----CTTHHHHHHHHHHHHHTTCCCCCH-------H-------HHHHHH
T ss_pred CCcCCEEEEEC--C-ce--------eEcCCC----cHHHHHHHHHHHHhccCCCCCCCH-------H-------HHHHHH
Confidence 99999999983 3 11 111211 234455544432211100 00000 0 000123
Q ss_pred cCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhc-CCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHh
Q 008336 354 DLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKER-NESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRK 432 (569)
Q Consensus 354 ~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~ 432 (569)
++.++++++.||++||++|+.+.|.|++++..++.+ ..++.+..|+++..+ ++++.
T Consensus 135 ~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~-----------------------~~~~~ 191 (243)
T 2hls_A 135 SLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENP-----------------------DIADK 191 (243)
T ss_dssp HCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCH-----------------------HHHHH
T ss_pred HcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCH-----------------------HHHHH
Confidence 456889999999999999999999999999998521 125888888877654 47889
Q ss_pred cCCCCccEEEEECCCCcEEEc
Q 008336 433 FKVSGIPMLVAIGPSGRTITK 453 (569)
Q Consensus 433 ~~v~~~Pt~~lid~~G~i~~~ 453 (569)
|+|+++||+++ +|++++.
T Consensus 192 ~~V~~vPt~~i---~G~~~~~ 209 (243)
T 2hls_A 192 YGVMSVPSIAI---NGYLVFV 209 (243)
T ss_dssp TTCCSSSEEEE---TTEEEEE
T ss_pred cCCeeeCeEEE---CCEEEEe
Confidence 99999999988 7887644
No 101
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.76 E-value=8.7e-19 Score=161.25 Aligned_cols=116 Identities=14% Similarity=0.200 Sum_probs=95.9
Q ss_pred cCCcccee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC-------ChhHH
Q 008336 336 SGDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR-------DQTSF 407 (569)
Q Consensus 336 ~~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~-------~~~~~ 407 (569)
...|+|.+ +.+|+++++++++||++||+||++||++|++++|.|++++++++++ ++.|++|++|. +.+.+
T Consensus 27 ~~~p~f~l~~~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~--~v~vv~vs~d~~~~~e~~~~~~~ 104 (181)
T 2p31_A 27 QDFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPH--HFNVLAFPCNQFGQQEPDSNKEI 104 (181)
T ss_dssp CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCCSTTCCCSCHHHH
T ss_pred CccCceEeecCCCCEecHHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcC--CEEEEEEECcCCCCCCCCCHHHH
Confidence 34589988 9999999999999999999999999999999999999999999876 69999999984 67788
Q ss_pred HHHHhc-CCCcccccCc--hhhHHHH---HhcCCCCcc-------EEEEECCCCcEEEcc
Q 008336 408 DEFFKG-MPWLALPFGD--ARKASLS---RKFKVSGIP-------MLVAIGPSGRTITKE 454 (569)
Q Consensus 408 ~~~~~~-~~~~~~~~~~--d~~~~l~---~~~~v~~~P-------t~~lid~~G~i~~~~ 454 (569)
++|+++ ++ +.+|+.. |.++... -.|.+.++| ++||||++|+|+.+.
T Consensus 105 ~~~~~~~~~-~~~p~~~~~d~~g~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~ 163 (181)
T 2p31_A 105 ESFARRTYS-VSFPMFSKIAVTGTGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAW 163 (181)
T ss_dssp HHHHHHHHC-CCSCBBCCCCCSSTTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEE
T ss_pred HHHHHhhcC-CCceeEeecccCCccchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEe
Confidence 899887 65 5677663 2222111 135577888 999999999999984
No 102
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.76 E-value=1.2e-18 Score=160.98 Aligned_cols=117 Identities=16% Similarity=0.227 Sum_probs=102.7
Q ss_pred cCCcccee-cC-CC--CceecccCCCCEEEEEEec-CCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHH
Q 008336 336 SGDLDFVV-GK-NG--GKVPVSDLAGKTILLYFSA-HWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEF 410 (569)
Q Consensus 336 ~~~~~f~~-~~-~g--~~v~l~~~~gk~vll~F~a-~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~ 410 (569)
...|+|.+ +. +| +.+++++++||++||+||+ +||++|+.++|.|++++++++++ +++||+|++|. .+..++|
T Consensus 5 ~~aP~f~l~~~~~G~~~~v~l~~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~--~v~vv~Is~d~-~~~~~~~ 81 (186)
T 1n8j_A 5 TKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKL--GVDVYSVSTDT-HFTHKAW 81 (186)
T ss_dssp CBCCCCEEEEEETTEEEEEEHHHHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHT--TEEEEEEESSC-HHHHHHH
T ss_pred CcCCCcEeecccCCcceEEEHHHHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHC--CCEEEEEECCC-HHHHHHH
Confidence 34689988 77 58 8999999999999999995 99999999999999999999875 69999999984 5678889
Q ss_pred HhcCC---CcccccCchhhHHHHHhcCCC------CccEEEEECCCCcEEEccc
Q 008336 411 FKGMP---WLALPFGDARKASLSRKFKVS------GIPMLVAIGPSGRTITKEA 455 (569)
Q Consensus 411 ~~~~~---~~~~~~~~d~~~~l~~~~~v~------~~Pt~~lid~~G~i~~~~~ 455 (569)
+++++ .+.||++.|....+++.|++. .+|++||||++|+|+++..
T Consensus 82 ~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~i~~~~~ 135 (186)
T 1n8j_A 82 HSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEV 135 (186)
T ss_dssp HHHCTTGGGCCSEEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEE
T ss_pred HHHcCcccCCceeEEECCchHHHHHhCCccCCCCceeeEEEEECCCCeEEEEEe
Confidence 98872 367888888888999999997 3799999999999999854
No 103
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.76 E-value=9.7e-18 Score=149.69 Aligned_cols=115 Identities=25% Similarity=0.436 Sum_probs=102.3
Q ss_pred cccCccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeC--CCCHHHHHHH
Q 008336 14 LLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSG--DEDDEAFKGY 89 (569)
Q Consensus 14 ~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~--d~~~~~~~~~ 89 (569)
.+|.++|+| +.+.+|+.+++++++ | +||+||++||++|+.++|.|.++++++ ++.+++|++ +++.+.+++|
T Consensus 6 ~~g~~~p~f~l~~~~g~~~~l~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~----~v~~v~v~~d~~~~~~~~~~~ 80 (154)
T 3ia1_A 6 KPGEPLPDFLLLDPKGQPVTPATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET----GVPFYVISREPRDTREVVLEY 80 (154)
T ss_dssp CSBEECCCCCEECTTSCEECTTTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH----CCCEEEEECCTTCCHHHHHHH
T ss_pred CCCCcCCceEEECCCCCEechHHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc----CCeEEEEeCCCcccHHHHHHH
Confidence 479999999 667899999999999 9 999999999999999999999999999 388999999 5789999999
Q ss_pred HHhCCCcccccCCc-hhHHHHHHhcCCCCccEEEEECCCCcEEEc
Q 008336 90 FSKMPWLAVPFSDS-ETRDKLDELFKVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 90 ~~~~~~~~~~~~~~-~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 133 (569)
++++++.+..+.+. +....+.+.|++.++|+++|+|++|+++..
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 125 (154)
T 3ia1_A 81 MKTYPRFIPLLASDRDRPHEVAARFKVLGQPWTFVVDREGKVVAL 125 (154)
T ss_dssp HTTCTTEEECBCCSSCCHHHHHTTSSBCSSCEEEEECTTSEEEEE
T ss_pred HHHcCCCcccccccccchHHHHHHhCCCcccEEEEECCCCCEEEE
Confidence 99999877666652 234579999999999999999999999874
No 104
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.76 E-value=1.7e-18 Score=163.43 Aligned_cols=137 Identities=18% Similarity=0.211 Sum_probs=114.3
Q ss_pred cCCcccee-cC--CC--CceecccC-CCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHH
Q 008336 336 SGDLDFVV-GK--NG--GKVPVSDL-AGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFD 408 (569)
Q Consensus 336 ~~~~~f~~-~~--~g--~~v~l~~~-~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~ 408 (569)
...|+|.+ +. +| +.++++++ +||++||+|| ++||++|+.++|.|.+++++|+++ +++||+|++| +.+..+
T Consensus 25 ~~aP~f~l~~~~~~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~Is~D-~~~~~~ 101 (213)
T 2i81_A 25 KEAPFFKAEAVFGDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHER--NVELLGCSVD-SKYTHL 101 (213)
T ss_dssp SBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHT--TEEEEEEESS-CHHHHH
T ss_pred CcCCCeEeeccccCCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEeCC-CHHHHH
Confidence 34689988 77 89 89999999 9999999999 999999999999999999999865 6999999998 557788
Q ss_pred HHHhcCC------CcccccCchhhHHHHHhcCCC-----CccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHH
Q 008336 409 EFFKGMP------WLALPFGDARKASLSRKFKVS-----GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEI 477 (569)
Q Consensus 409 ~~~~~~~------~~~~~~~~d~~~~l~~~~~v~-----~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l 477 (569)
+|++.+. .+.+|++.|....+++.|++. .+|++||||++|+|+++..+.. ......++|
T Consensus 102 ~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~----------~~~~~~~el 171 (213)
T 2i81_A 102 AWKKTPLAKGGIGNIKHTLLSDITKSISKDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNL----------AIGRSVDEI 171 (213)
T ss_dssp HHHSSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECEEEEEECTTSBEEEEEEECT----------TCCCCHHHH
T ss_pred HHHHHHHhhCCccCCCceEEECCchHHHHHhCCccccCCcccEEEEECCCCEEEEEEecCC----------CCCCCHHHH
Confidence 8988772 478899989889999999999 8999999999999999853221 112345666
Q ss_pred HHHhhhhh
Q 008336 478 DGQYNEMA 485 (569)
Q Consensus 478 ~~~l~~l~ 485 (569)
.+.|+.+.
T Consensus 172 l~~l~~l~ 179 (213)
T 2i81_A 172 LRIIDAIQ 179 (213)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 67776654
No 105
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.76 E-value=2.8e-18 Score=157.53 Aligned_cols=117 Identities=16% Similarity=0.167 Sum_probs=101.5
Q ss_pred ccccCccCCc-eecCCCceeecCCCCCc-EEEEEe-cCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHH
Q 008336 13 SLLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGY 89 (569)
Q Consensus 13 ~~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~ 89 (569)
..+|.++|+| +.+.+|+.+++++++|| ++|+|| ++||++|+.++|.|++++++|++.+ +.|++|+.| +.+..++|
T Consensus 25 d~ig~~aP~f~l~~~~G~~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~-~~vv~Vs~D-~~~~~~~~ 102 (179)
T 3ixr_A 25 DTLNHSLLNHPLMLSGSTCKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQIN-ATVLGVSRD-SVKSHDSF 102 (179)
T ss_dssp CBCCHHHHHCCEEEGGGEEECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTT-EEEEEEESC-CHHHHHHH
T ss_pred cccCCcCCCeeEECCCCCEEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCC-CEEEEEcCC-CHHHHHHH
Confidence 3455669999 66789999999999999 999998 9999999999999999999999875 999999998 57788999
Q ss_pred HHhCCCcccccCCchhHHHHHHhcCCCC------------ccEEEEECCCCcEEEc
Q 008336 90 FSKMPWLAVPFSDSETRDKLDELFKVMG------------IPHLVILDENGKVLSD 133 (569)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~l~~~~~v~~------------~P~~~lid~~G~i~~~ 133 (569)
+++++..+..+.|.. ..+.+.|++.. .|++||||++|+|+..
T Consensus 103 ~~~~~~~f~~l~D~~--~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~ 156 (179)
T 3ixr_A 103 CAKQGFTFPLVSDSD--AILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEA 156 (179)
T ss_dssp HHHHTCCSCEEECTT--CHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEE
T ss_pred HHHcCCceEEEECCc--hHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEE
Confidence 999887776666644 36889999853 6999999999999874
No 106
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.76 E-value=2.2e-18 Score=155.57 Aligned_cols=109 Identities=20% Similarity=0.357 Sum_probs=98.4
Q ss_pred cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC-----CChhHHHHHHhcCCCcc
Q 008336 344 GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSD-----RDQTSFDEFFKGMPWLA 418 (569)
Q Consensus 344 ~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d-----~~~~~~~~~~~~~~~~~ 418 (569)
+.+|+.+++++++||++||+||++||++|+.++|.|++++++++.+ ++.||+|++| .+.+.+.+|++.+++..
T Consensus 25 ~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (164)
T 2h30_A 25 TADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFS--SANLITVASPGFLHEKKDGEFQKWYAGLNYPK 102 (164)
T ss_dssp ETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGT--TSEEEEEECTTSTTCCCTTHHHHHHTTSCCTT
T ss_pred CCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccC--CcEEEEEEcCCCccccCHHHHHHHHHhCCCCc
Confidence 7899999999999999999999999999999999999999998765 6999999985 34578889998887666
Q ss_pred cccCchhhHHHHHhcCCCCccEEEEECCCCcEEEcc
Q 008336 419 LPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 419 ~~~~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~ 454 (569)
+++..+....+++.|+|.++|+++|||++|+++.+.
T Consensus 103 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 138 (164)
T 2h30_A 103 LPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQRIV 138 (164)
T ss_dssp SCEEECTTCHHHHHTTCCSSSEEEEECTTSCEEEEE
T ss_pred ceEEEcCchHHHHHcCCCccceEEEECCCCcEEEEE
Confidence 888888888999999999999999999999999874
No 107
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.76 E-value=7.3e-19 Score=159.49 Aligned_cols=135 Identities=14% Similarity=0.126 Sum_probs=111.8
Q ss_pred CCcccee-cCCCCceecccCCCCEEEEEEecCC-ChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcC
Q 008336 337 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHW-CPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGM 414 (569)
Q Consensus 337 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~w-C~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~ 414 (569)
..|+|.+ +.+|+++++++++||+++|+||++| |++|+.++|.|+++++++ . ++.|++|++| +.+.+++|++++
T Consensus 23 ~~p~f~l~~~~G~~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~---~~~vv~is~d-~~~~~~~~~~~~ 97 (167)
T 2jsy_A 23 QAPDFTVLTNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-G---DVNVYTISAD-LPFAQARWCGAN 97 (167)
T ss_dssp CCCCCEEEBTTCCEEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-S---SCEEEEEECS-SGGGTSCCGGGS
T ss_pred cCCceEEECCCCCEeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-C---CCEEEEEECC-CHHHHHHHHHhc
Confidence 4589988 9999999999999999999999999 999999999999999999 3 5999999998 456778888888
Q ss_pred CCcccccCch-hhHHHHHhcCCCC------ccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhh
Q 008336 415 PWLALPFGDA-RKASLSRKFKVSG------IPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMA 485 (569)
Q Consensus 415 ~~~~~~~~~d-~~~~l~~~~~v~~------~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~ 485 (569)
++..+|++.| ....+++.|++.. +|+++|||++|+|+++..+.. +....+.+++.+.|++++
T Consensus 98 ~~~~~~~~~d~~~~~~~~~~~v~~~~~g~~~p~~~lid~~G~i~~~~~g~~---------~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 98 GIDKVETLSDHRDMSFGEAFGVYIKELRLLARSVFVLDENGKVVYAEYVSE---------ATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp SCTTEEEEEGGGTCHHHHHTTCBBTTTCSBCCEEEEECTTSCEEEEEECSB---------TTSCCCSHHHHHHHHHHH
T ss_pred CCCCceEeeCCchhHHHHHhCCccccCCceeeEEEEEcCCCcEEEEEecCC---------cCCCCCHHHHHHHHHHhh
Confidence 7548888888 7888999999987 499999999999999854321 112223466677777665
No 108
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.76 E-value=8.1e-17 Score=164.99 Aligned_cols=279 Identities=13% Similarity=0.141 Sum_probs=171.9
Q ss_pred CCc-EEEEEecCCCHhhHhhH------HHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHH
Q 008336 37 KGK-IGLYFSASWCGPCQRFT------PILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKL 109 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~------p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 109 (569)
.++ +||+||||||+||+... |.+.++++.++.. ++.++.|+++..+ .+
T Consensus 29 ~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~-~v~~~~Vd~~~~~------------------------~l 83 (367)
T 3us3_A 29 KYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDK-GVGFGLVDSEKDA------------------------AV 83 (367)
T ss_dssp HCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTTH------------------------HH
T ss_pred hCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcC-CceEEEEeCcccH------------------------HH
Confidence 357 99999999999974332 6889999998755 4999999999764 49
Q ss_pred HHhcCCCCccEEEEECCCCcEEEcCCcceeecccCCCCCccHHHHHHHHHHHHHHHhhcccccccccCCCceeecCCCce
Q 008336 110 DELFKVMGIPHLVILDENGKVLSDGGVEIIREYGVEGYPFTVERIKEMKEQEERAKREQSLRSVLTSHSRDFVISSDGRK 189 (569)
Q Consensus 110 ~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~ 189 (569)
++.|+|+++||++++ ++|+.+.+.| +++.+.|.+++.+.. ...+.. ++ +.+.
T Consensus 84 ~~~~~V~~~PTl~~f-~~G~~~~y~G------------~~~~~~i~~~i~~~~----~~~v~~----------i~-~~~~ 135 (367)
T 3us3_A 84 AKKLGLTEEDSIYVF-KEDEVIEYDG------------EFSADTLVEFLLDVL----EDPVEL----------IE-GERE 135 (367)
T ss_dssp HHHHTCCSTTEEEEE-ETTEEEECCS------------CCSHHHHHHHHHHHH----SCSEEE----------CC-SHHH
T ss_pred HHHcCCCcCceEEEE-ECCcEEEeCC------------CCCHHHHHHHHHHhc----CCCcEE----------cC-CHHH
Confidence 999999999999999 5787654322 345666666654321 111110 00 0011
Q ss_pred eeeccc-cCcEEEEEEecCCcccchhhhHHHHHHHHHHhcCCCceEEEEeeccccHHHHHHHhcCCCcccccCCchhHHH
Q 008336 190 ISVSDL-EGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREK 268 (569)
Q Consensus 190 ~~~~~~-~gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ei~~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~ 268 (569)
+..... +.+.+++.|+.++| ....+.+.+++..++.. +.|+... ...
T Consensus 136 ~~~~~~~~~~~~vv~ff~~~~---~~~~~~f~~~A~~~~~~-----~~F~~~~------------------------~~~ 183 (367)
T 3us3_A 136 LQAFENIEDEIKLIGYFKNKD---SEHYKAFKEAAEEFHPY-----IPFFATF------------------------DSK 183 (367)
T ss_dssp HHHHHHCCSSCEEEEECSCTT---CHHHHHHHHHHHHHTTT-----SCEEEEC------------------------CHH
T ss_pred HHHHhccCCCcEEEEEECCCC---chHHHHHHHHHHhhcCC-----cEEEEEC------------------------CHH
Confidence 111001 23556666666654 46677888888888654 3333322 235
Q ss_pred HHhhcccCCCceEEEECCCC-C-chhhhhHHHHHhhCCCCCCCChHHHHHHHHHHHHHHhhhhhhhhhccCCccceecCC
Q 008336 269 LARYFELSTLPTLVIIGPDG-K-TLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGDLDFVVGKN 346 (569)
Q Consensus 269 l~~~f~v~~~Ptlvi~~~~g-~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~f~~~~~ 346 (569)
+++.|+++. |+++++.+.. . ..+. | -+++.+.+..++..... |- +...+
T Consensus 184 ~~~~~~v~~-p~i~lf~~~~~~~~~y~---------g---~~~~~~~l~~fi~~~~~---------------p~-v~elt 234 (367)
T 3us3_A 184 VAKKLTLKL-NEIDFYEAFMEEPVTIP---------D---KPNSEEEIVNFVEEHRR---------------ST-LRKLK 234 (367)
T ss_dssp HHHHHTCCT-TCEEEECTTCSSCEECS---------S---SSCCHHHHHHHHHHTCS---------------CS-EEECC
T ss_pred HHHHcCCCC-CeEEEEcCCCCCCeecC---------C---CCCCHHHHHHHHHHcCc---------------cc-eeecC
Confidence 678899885 9999997632 1 1111 1 13567777777653211 11 11111
Q ss_pred CCce-e-cccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCch
Q 008336 347 GGKV-P-VSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDA 424 (569)
Q Consensus 347 g~~v-~-l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d 424 (569)
.... . +.+-..++.+|.|+..+|+.+....+.|.+++++++++ ..+.++.|+.+.....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~-~ki~F~~id~~~~~~~------------------ 295 (367)
T 3us3_A 235 PESMYETWEDDMDGIHIVAFAEEADPDGYEFLEILKSVAQDNTDN-PDLSIIWIDPDDFPLL------------------ 295 (367)
T ss_dssp GGGHHHHHHSCBTTEEEEEECCTTSHHHHHHHHHHHHHHHHTTTC-TTCCEEEECGGGCTTT------------------
T ss_pred hhhHHHHHhhccCCcEEEEEEcCCChhHHHHHHHHHHHHHHcCCC-CceEEEEECCccchhH------------------
Confidence 1111 1 11101345667799999999999999999999999863 1377788776543210
Q ss_pred hhHHHHHhcCCC-CccEEEEECCCCc
Q 008336 425 RKASLSRKFKVS-GIPMLVAIGPSGR 449 (569)
Q Consensus 425 ~~~~l~~~~~v~-~~Pt~~lid~~G~ 449 (569)
...+.+.||+. .+|++++++....
T Consensus 296 -l~~~~~~fgl~~~~P~~~i~~~~~~ 320 (367)
T 3us3_A 296 -VPYWEKTFDIDLSAPQIGVVNVTDA 320 (367)
T ss_dssp -HHHHHHHHTCCTTSCEEEEEETTTC
T ss_pred -HHHHHHhcCCCCCCCeEEEEecccc
Confidence 01124567887 8999999986543
No 109
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.76 E-value=1.4e-18 Score=160.86 Aligned_cols=116 Identities=22% Similarity=0.295 Sum_probs=104.3
Q ss_pred CCcccee-cCCCC----ceecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHH
Q 008336 337 GDLDFVV-GKNGG----KVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEF 410 (569)
Q Consensus 337 ~~~~f~~-~~~g~----~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~ 410 (569)
..|+|.+ +.+|+ .+++++++||++||+|| ++||++|+.++|.|.+++++++++ ++.|++|++|. .+..++|
T Consensus 6 ~~P~f~l~~~~g~~~~~~~~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~--~v~vv~vs~d~-~~~~~~~ 82 (187)
T 1we0_A 6 EVQPFRAQAFQSGKDFFEVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKL--GVEVYSVSTDT-HFVHKAW 82 (187)
T ss_dssp BCCCCEEEEECSSSCCEEEETTTTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHT--TEEEEEEESSC-HHHHHHH
T ss_pred cCCCeEEeccCCCccceEecHHHHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHc--CCEEEEEECCC-HHHHHHH
Confidence 4589988 88898 99999999999999999 999999999999999999999875 69999999986 5778889
Q ss_pred HhcCC---CcccccCchhhHHHHHhcCCC------CccEEEEECCCCcEEEccc
Q 008336 411 FKGMP---WLALPFGDARKASLSRKFKVS------GIPMLVAIGPSGRTITKEA 455 (569)
Q Consensus 411 ~~~~~---~~~~~~~~d~~~~l~~~~~v~------~~Pt~~lid~~G~i~~~~~ 455 (569)
.+.+. .+.+|++.|....+++.|++. ++|+++|||++|+|+.+..
T Consensus 83 ~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~~~ 136 (187)
T 1we0_A 83 HENSPAVGSIEYIMIGDPSQTISRQFDVLNEETGLADRGTFIIDPDGVIQAIEI 136 (187)
T ss_dssp HHSCHHHHTCCSEEEECTTCHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEE
T ss_pred HHHhccccCCCceEEECCchHHHHHhCCCcCCCCceeeEEEEECCCCeEEEEEe
Confidence 88873 367888888888999999999 9999999999999999854
No 110
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.76 E-value=7.5e-18 Score=155.64 Aligned_cols=117 Identities=26% Similarity=0.491 Sum_probs=100.4
Q ss_pred cccCccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCC-HHHHHHHH
Q 008336 14 LLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDED-DEAFKGYF 90 (569)
Q Consensus 14 ~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~-~~~~~~~~ 90 (569)
.+|.++|+| +.+.+|+.+++++++|| +||+||++||++|+.++|.|.+++++++.. ++.|++|++|.+ .+.+++|+
T Consensus 35 ~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~d~~~~~~~~~~~ 113 (186)
T 1jfu_A 35 SAPLKLPDLAFEDADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGP-NFEVVAINIDTRDPEKPKTFL 113 (186)
T ss_dssp CSCCBCCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBT-TEEEEEEECCCSCTTHHHHHH
T ss_pred cCCCcCCCcEeEcCCCCEeeHHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccC-CcEEEEEECCCCCHHHHHHHH
Confidence 569999999 56789999999999999 999999999999999999999999999866 499999999964 57789999
Q ss_pred HhCCCcccc-cCCchhHHHHHHhcCCC----CccEEEEECCCCcEEEc
Q 008336 91 SKMPWLAVP-FSDSETRDKLDELFKVM----GIPHLVILDENGKVLSD 133 (569)
Q Consensus 91 ~~~~~~~~~-~~~~~~~~~l~~~~~v~----~~P~~~lid~~G~i~~~ 133 (569)
++++....+ +.+.. ..+.+.|++. ++|+++|||++|+|+..
T Consensus 114 ~~~~~~~~~~~~d~~--~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~ 159 (186)
T 1jfu_A 114 KEANLTRLGYFNDQK--AKVFQDLKAIGRALGMPTSVLVDPQGCEIAT 159 (186)
T ss_dssp HHTTCCTTCCEECTT--CHHHHHHHTTTCCSSSSEEEEECTTSBEEEE
T ss_pred HHcCCCCCceEECCc--chHHHHhccccccCCCCEEEEECCCCCEEEE
Confidence 999874333 34433 4678888885 89999999999999874
No 111
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.76 E-value=3e-18 Score=161.00 Aligned_cols=119 Identities=21% Similarity=0.175 Sum_probs=93.1
Q ss_pred cccCccCCc-eecCC-CceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCC-------CCH
Q 008336 14 LLSSSARDF-LIRSN-GDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD-------EDD 83 (569)
Q Consensus 14 ~~g~~~pdf-~~~~~-g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d-------~~~ 83 (569)
-.+.++|+| +.+.+ |+.+++++++|| +||+|||+|||+|+.++|.|++++++|++++ ++|++|++| ++.
T Consensus 21 ~~~~~~p~f~l~~~~~G~~v~l~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g-~~vv~v~~d~~~~~e~d~~ 99 (208)
T 2f8a_A 21 QSMQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRG-LVVLGFPCNQFGHQENAKN 99 (208)
T ss_dssp -CCCCGGGCEECBTTCSSCEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT-EEEEEEECCCSTTTTCSCH
T ss_pred hhcCccCceEeeeCCCCCCccHHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCC-eEEEEEECCcccccCCCCH
Confidence 347889999 55688 999999999999 9999999999999999999999999999875 999999987 246
Q ss_pred HHHHHHHH------hCCCcccccCCch----hH----HHHHHhc-------------------------CCCCccEEEEE
Q 008336 84 EAFKGYFS------KMPWLAVPFSDSE----TR----DKLDELF-------------------------KVMGIPHLVIL 124 (569)
Q Consensus 84 ~~~~~~~~------~~~~~~~~~~~~~----~~----~~l~~~~-------------------------~v~~~P~~~li 124 (569)
+.+++|++ +++..+..+.+.+ .. ..+...+ ++.+.|+++||
T Consensus 100 ~~i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflI 179 (208)
T 2f8a_A 100 EEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLV 179 (208)
T ss_dssp HHHHHHHHHTSSCTTCCCSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEE
T ss_pred HHHHHHHHhcccccccccceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEE
Confidence 78899997 6666554442211 00 1111112 36677999999
Q ss_pred CCCCcEEEc
Q 008336 125 DENGKVLSD 133 (569)
Q Consensus 125 d~~G~i~~~ 133 (569)
|++|+|+.+
T Consensus 180 D~~G~i~~~ 188 (208)
T 2f8a_A 180 GPDGVPLRR 188 (208)
T ss_dssp CTTSCEEEE
T ss_pred cCCCcEEEE
Confidence 999999875
No 112
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.76 E-value=2.5e-18 Score=156.19 Aligned_cols=117 Identities=17% Similarity=0.261 Sum_probs=95.8
Q ss_pred cCCcccee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC-------CChhHH
Q 008336 336 SGDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSD-------RDQTSF 407 (569)
Q Consensus 336 ~~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d-------~~~~~~ 407 (569)
...|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|++++++++++ ++.|++|++| .+.+.+
T Consensus 10 ~~~p~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~vs~d~~~~~~~~~~~~~ 87 (170)
T 2p5q_A 10 ESVHDFTVKDAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQ--GLEILAFPCNQFGEEEPGTNDQI 87 (170)
T ss_dssp CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCTTTTCCCSCHHHH
T ss_pred ccccceEEEcCCCCEecHHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccC--CEEEEEEECCCCCCCCCCCHHHH
Confidence 34589988 9999999999999999999999999999999999999999999876 6999999997 367788
Q ss_pred HHHHh-cCCCcccccC--chhhHHH----H-----HhcCC--CCcc---EEEEECCCCcEEEccc
Q 008336 408 DEFFK-GMPWLALPFG--DARKASL----S-----RKFKV--SGIP---MLVAIGPSGRTITKEA 455 (569)
Q Consensus 408 ~~~~~-~~~~~~~~~~--~d~~~~l----~-----~~~~v--~~~P---t~~lid~~G~i~~~~~ 455 (569)
++|++ +++ +.+|+. .|..... . +.+++ .++| +++|||++|+|+.+..
T Consensus 88 ~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~ 151 (170)
T 2p5q_A 88 TDFVCTRFK-SEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYY 151 (170)
T ss_dssp HHHHHHHTC-CCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEEC
T ss_pred HHHHHHhcC-CCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeC
Confidence 89988 555 456665 2333222 1 12466 7888 9999999999999853
No 113
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.76 E-value=1.7e-18 Score=157.10 Aligned_cols=116 Identities=12% Similarity=0.189 Sum_probs=93.2
Q ss_pred CCcccee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC-------ChhHHH
Q 008336 337 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR-------DQTSFD 408 (569)
Q Consensus 337 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~-------~~~~~~ 408 (569)
..|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|++++++++++ ++.|++|++|. +.+.++
T Consensus 10 ~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~d~~~~~~~~~~~~~~ 87 (169)
T 2v1m_A 10 SIYEFTVKDINGVDVSLEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGK--GLRILAFPCNQFGGQEPWAEAEIK 87 (169)
T ss_dssp SGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCCSTTCCCSCHHHHH
T ss_pred ccccceeecCCCCCccHHHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcC--CeEEEEEECCccCCCCCCCHHHHH
Confidence 4589988 9999999999999999999999999999999999999999999876 69999999973 457788
Q ss_pred HH-HhcCCCcccccCc--hhhHHHH----H-----hcC-----CCCccEEEEECCCCcEEEccc
Q 008336 409 EF-FKGMPWLALPFGD--ARKASLS----R-----KFK-----VSGIPMLVAIGPSGRTITKEA 455 (569)
Q Consensus 409 ~~-~~~~~~~~~~~~~--d~~~~l~----~-----~~~-----v~~~Pt~~lid~~G~i~~~~~ 455 (569)
+| .++++ +.+|+.. |..+... + .++ ++.+|+++|||++|+|+.+..
T Consensus 88 ~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~ 150 (169)
T 2v1m_A 88 KFVTEKYG-VQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYS 150 (169)
T ss_dssp HHHHHHHC-CCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEEC
T ss_pred HHHHHhcC-CCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcC
Confidence 88 47665 4566553 3222211 1 125 556799999999999999853
No 114
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.76 E-value=4.7e-18 Score=161.04 Aligned_cols=116 Identities=20% Similarity=0.219 Sum_probs=99.5
Q ss_pred cccCccCCc-eecC--CC--ceeecCCC-CCc-EEEEEe-cCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHH
Q 008336 14 LLSSSARDF-LIRS--NG--DQVKLDSL-KGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEA 85 (569)
Q Consensus 14 ~~g~~~pdf-~~~~--~g--~~v~l~~~-~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~ 85 (569)
.+|.++|+| +.+. +| +.++++++ +|| +||+|| ++||++|+.++|.|++++++|++++ ++|++|++| +.+.
T Consensus 26 ~~G~~aP~F~l~~~~~~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~-v~vv~Is~D-~~~~ 103 (221)
T 2c0d_A 26 LVTKKAYNFTAQGLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKN-VELLGISVD-SVYS 103 (221)
T ss_dssp CTTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTT-EEEEEEESS-CHHH
T ss_pred CCCCCCCCeEEeccccCCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCC-CEEEEEeCC-CHHH
Confidence 579999999 5566 89 99999999 999 999999 9999999999999999999998775 999999997 5677
Q ss_pred HHHHHHhC-------CCcccccCCchhHHHHHHhcCC-----CCccEEEEECCCCcEEEc
Q 008336 86 FKGYFSKM-------PWLAVPFSDSETRDKLDELFKV-----MGIPHLVILDENGKVLSD 133 (569)
Q Consensus 86 ~~~~~~~~-------~~~~~~~~~~~~~~~l~~~~~v-----~~~P~~~lid~~G~i~~~ 133 (569)
.++|+++. ++.+..+.|.. ..+.+.|++ ..+|+++|||++|+|+..
T Consensus 104 ~~~~~~~~~~~~g~~~~~fp~l~D~~--~~~~~~ygv~~~~g~~~P~~~lID~~G~I~~~ 161 (221)
T 2c0d_A 104 HLAWKNMPIEKGGIGNVEFTLVSDIN--KDISKNYNVLYDNSFALRGLFIIDKNGCVRHQ 161 (221)
T ss_dssp HHHHHHSCGGGTCCCSCSSEEEECTT--SHHHHHTTCEETTTEECEEEEEECTTSBEEEE
T ss_pred HHHHHHHhhhhcCccCCceEEEECCc--hHHHHHcCCcccCCCccceEEEECCCCeEEEE
Confidence 88899887 44444445533 478899999 479999999999999975
No 115
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.76 E-value=2.1e-18 Score=160.00 Aligned_cols=134 Identities=15% Similarity=0.219 Sum_probs=105.7
Q ss_pred CCcccee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC-------ChhHHH
Q 008336 337 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR-------DQTSFD 408 (569)
Q Consensus 337 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~-------~~~~~~ 408 (569)
..|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|++++++++++ ++.||+|++|. +.+.++
T Consensus 27 ~~p~f~l~~~~G~~~~l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~--~v~vv~vs~d~~~~~~~~~~~~~~ 104 (190)
T 2vup_A 27 SIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ--GFTVLAFPCNQFGGQEPGNEEEIK 104 (190)
T ss_dssp SGGGSCCBBTTSSBCCGGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TCEEEEEECCCSTTCCCSCHHHHH
T ss_pred cccCeEEEcCCCCEEEHHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcC--CeEEEEEEcCccCCCCCCCHHHHH
Confidence 3589988 9999999999999999999999999999999999999999999876 69999999984 677888
Q ss_pred HHH-hcCCCcccccCc--hhhHHH----H-----HhcCCCCcc------EEEEECCCCcEEEccchhhHhhcCCCCCCCC
Q 008336 409 EFF-KGMPWLALPFGD--ARKASL----S-----RKFKVSGIP------MLVAIGPSGRTITKEARDMIAVHGAEAYPFT 470 (569)
Q Consensus 409 ~~~-~~~~~~~~~~~~--d~~~~l----~-----~~~~v~~~P------t~~lid~~G~i~~~~~~~~~~~~g~~~~p~~ 470 (569)
+|+ ++++ +.+|++. |....+ . +.|++.++| ++||||++|+|+.+..+. ..
T Consensus 105 ~~~~~~~~-~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~-----------~~ 172 (190)
T 2vup_A 105 EFVCTKFK-AEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPG-----------AS 172 (190)
T ss_dssp HHHHHHHC-CCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTT-----------CC
T ss_pred HHHHHhcC-CCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCC-----------CC
Confidence 998 6665 4566653 322221 1 346899999 999999999999984321 12
Q ss_pred HHHHHHHHHHhhhhhcC
Q 008336 471 EERMKEIDGQYNEMAKG 487 (569)
Q Consensus 471 ~~~~~~l~~~l~~l~~~ 487 (569)
.++|.+.|+++++.
T Consensus 173 ---~~~l~~~i~~ll~~ 186 (190)
T 2vup_A 173 ---VKDIEKKLIPLLES 186 (190)
T ss_dssp ---HHHHHHHHHHHHHC
T ss_pred ---HHHHHHHHHHHHhh
Confidence 24566777777653
No 116
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.76 E-value=5.5e-18 Score=156.75 Aligned_cols=116 Identities=22% Similarity=0.289 Sum_probs=101.1
Q ss_pred cccCccCCc-eecCCCc----eeecCCCCCc-EEEEEe-cCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHH
Q 008336 14 LLSSSARDF-LIRSNGD----QVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAF 86 (569)
Q Consensus 14 ~~g~~~pdf-~~~~~g~----~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~ 86 (569)
.+|.++|+| +.+.+|+ .+++++++|| +||+|| ++||++|+.++|.|.+++++|++++ +.|++|++|. .+..
T Consensus 2 ~~G~~~P~f~l~~~~g~~~~~~~~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~-v~vv~vs~d~-~~~~ 79 (187)
T 1we0_A 2 LIGTEVQPFRAQAFQSGKDFFEVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLG-VEVYSVSTDT-HFVH 79 (187)
T ss_dssp CTTCBCCCCEEEEECSSSCCEEEETTTTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTT-EEEEEEESSC-HHHH
T ss_pred CCCCcCCCeEEeccCCCccceEecHHHHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcC-CEEEEEECCC-HHHH
Confidence 369999999 5567888 9999999999 999999 9999999999999999999998774 9999999985 6778
Q ss_pred HHHHHhC----CCcccccCCchhHHHHHHhcCCC------CccEEEEECCCCcEEEc
Q 008336 87 KGYFSKM----PWLAVPFSDSETRDKLDELFKVM------GIPHLVILDENGKVLSD 133 (569)
Q Consensus 87 ~~~~~~~----~~~~~~~~~~~~~~~l~~~~~v~------~~P~~~lid~~G~i~~~ 133 (569)
++|++++ ++.+..+.+.. ..+.+.|++. ++|+++|||++|+|+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~ 134 (187)
T 1we0_A 80 KAWHENSPAVGSIEYIMIGDPS--QTISRQFDVLNEETGLADRGTFIIDPDGVIQAI 134 (187)
T ss_dssp HHHHHSCHHHHTCCSEEEECTT--CHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred HHHHHHhccccCCCceEEECCc--hHHHHHhCCCcCCCCceeeEEEEECCCCeEEEE
Confidence 8999887 56555555543 4788999998 99999999999999875
No 117
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.75 E-value=1.4e-18 Score=158.32 Aligned_cols=116 Identities=21% Similarity=0.296 Sum_probs=85.5
Q ss_pred cCccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCC-------CCHHHH
Q 008336 16 SSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD-------EDDEAF 86 (569)
Q Consensus 16 g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d-------~~~~~~ 86 (569)
++.+|+| +.+.+|+.+++++++|| +||+|||+||++|+ ++|.|.++++++++++ +.|++|++| ++.+.+
T Consensus 9 ~~~~~~f~l~d~~G~~~~l~~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~-v~vv~vs~d~~~~~~~d~~~~~ 86 (171)
T 3cmi_A 9 MSEFYKLAPVDKKGQPFPFDQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEG-FTIIGFPCNQFGHQEPGSDEEI 86 (171)
T ss_dssp -CGGGGCCCBBTTSCBCCGGGGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGT-EEEEEEEECSCC----------
T ss_pred hhheeeeEEEcCCCCEecHHHcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCC-eEEEEEECcccCCCCCCCHHHH
Confidence 6788999 56789999999999999 99999999999999 9999999999998875 999999986 456788
Q ss_pred HHHH-HhCCCcccccCCchhH----HH-----HHHhcCCCCcc------EEEEECCCCcEEEc
Q 008336 87 KGYF-SKMPWLAVPFSDSETR----DK-----LDELFKVMGIP------HLVILDENGKVLSD 133 (569)
Q Consensus 87 ~~~~-~~~~~~~~~~~~~~~~----~~-----l~~~~~v~~~P------~~~lid~~G~i~~~ 133 (569)
++|+ ++++..+..+.+.+.. .. ..+.|++.++| +++|||++|+|+..
T Consensus 87 ~~~~~~~~~~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~ 149 (171)
T 3cmi_A 87 AQFCQLNYGVTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYER 149 (171)
T ss_dssp --------CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEE
T ss_pred HHHHHhccCCCceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEE
Confidence 8999 8877666555432211 01 12468999999 99999999999875
No 118
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.75 E-value=1.1e-17 Score=160.10 Aligned_cols=174 Identities=17% Similarity=0.150 Sum_probs=112.6
Q ss_pred CcEEEEEE----ecCCcccchhhhHHHHHHHHHHhcCCCceEEEEeeccccHHHHHHHhcCCCcccccCCchhHHHHHhh
Q 008336 197 GKTIGLYF----SMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLARY 272 (569)
Q Consensus 197 gk~v~l~f----~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ei~~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~ 272 (569)
+..++++| ..+||++|+.+.|.+.+++..+... ..+ .++.+|.++ .+.+++.
T Consensus 21 ~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~-~~v--~~~~vd~~~---------------------~~~l~~~ 76 (229)
T 2ywm_A 21 EPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQ-DKI--KLDIYSPFT---------------------HKEETEK 76 (229)
T ss_dssp SCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCT-TTE--EEEEECTTT---------------------CHHHHHH
T ss_pred CCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCC-Cce--EEEEecCcc---------------------cHHHHHH
Confidence 34455555 2688999999999999998888542 234 444444443 5689999
Q ss_pred cccCCCceEEEECCCCCchhhhhHHHHHhhCCCCCCCChHHHHHHHHHHHHHHhhhhhhhhhccCCccceecCCCCce-e
Q 008336 273 FELSTLPTLVIIGPDGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGDLDFVVGKNGGKV-P 351 (569)
Q Consensus 273 f~v~~~Ptlvi~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~f~~~~~g~~v-~ 351 (569)
|+|+++||+++++ +|+... ...| ..+...+..+........ + +...+ +...+ .
T Consensus 77 ~~v~~~Ptl~~~~-~~~~~~-------~~~G----~~~~~~l~~~~~~~~~~~-----------~-~~~~l--~~~~~~~ 130 (229)
T 2ywm_A 77 YGVDRVPTIVIEG-DKDYGI-------RYIG----LPAGLEFTTLINGIFHVS-----------Q-RKPQL--SEKTLEL 130 (229)
T ss_dssp TTCCBSSEEEEES-SSCCCE-------EEES----CCCTTHHHHHHHHHHHHH-----------T-TCCSC--CHHHHHH
T ss_pred cCCCcCcEEEEEC-CCcccc-------eecC----CccHHHHHHHHHHHHhcc-----------C-CccCC--CHHHHHH
Confidence 9999999999996 333211 1112 123344444443222100 0 00000 00000 0
Q ss_pred cccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHH
Q 008336 352 VSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSR 431 (569)
Q Consensus 352 l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~ 431 (569)
+....++.++|+||++||++|+.+.|.++++++++. ++.++.|+++..+ ++++
T Consensus 131 ~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~----~v~~~~vd~~~~~-----------------------~l~~ 183 (229)
T 2ywm_A 131 LQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAND----YITSKVIDASENQ-----------------------DLAE 183 (229)
T ss_dssp HTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT----TEEEEEEEGGGCH-----------------------HHHH
T ss_pred HHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHCC----CeEEEEEECCCCH-----------------------HHHH
Confidence 112235566899999999999999999999988872 4888888887654 4899
Q ss_pred hcCCCCccEEEEECCCCcE
Q 008336 432 KFKVSGIPMLVAIGPSGRT 450 (569)
Q Consensus 432 ~~~v~~~Pt~~lid~~G~i 450 (569)
.|+|+++||+++ +|++
T Consensus 184 ~~~v~~~Pt~~~---~G~~ 199 (229)
T 2ywm_A 184 QFQVVGVPKIVI---NKGV 199 (229)
T ss_dssp HTTCCSSSEEEE---GGGT
T ss_pred HcCCcccCEEEE---CCEE
Confidence 999999999998 6773
No 119
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.75 E-value=2.5e-18 Score=160.13 Aligned_cols=137 Identities=12% Similarity=0.124 Sum_probs=113.4
Q ss_pred CCcccee-cCC-------------C--CceecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEe
Q 008336 337 GDLDFVV-GKN-------------G--GKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFIS 399 (569)
Q Consensus 337 ~~~~f~~-~~~-------------g--~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is 399 (569)
..|+|.+ +.+ | +.+++++++||++||+|| ++||++|+.++|.|.+++++++++ ++.|++|+
T Consensus 9 ~~P~f~l~~~~~~~~~~~~~~~~~G~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~Vs 86 (195)
T 2bmx_A 9 QFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDR--DAQILGVS 86 (195)
T ss_dssp BCCCCEEEEECSSCGGGSCCSSGGGGEEEEETTSSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTT--TEEEEEEE
T ss_pred cCCCcCcccccccccccccccccCCCccEeeHHHhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHC--CCEEEEEE
Confidence 3588877 666 7 899999999999999999 999999999999999999999865 69999999
Q ss_pred CCCChhHHHHHHhcCC---CcccccCchhhHHHHHhcCCC-----CccEEEEECCCCcEEEccchhhHhhcCCCCCCCCH
Q 008336 400 SDRDQTSFDEFFKGMP---WLALPFGDARKASLSRKFKVS-----GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTE 471 (569)
Q Consensus 400 ~d~~~~~~~~~~~~~~---~~~~~~~~d~~~~l~~~~~v~-----~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~ 471 (569)
+|. .+..++|++.+. .+.+|++.|....+++.|++. ++|+++|||++|+|+++..+.. ...
T Consensus 87 ~d~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~----------~~~ 155 (195)
T 2bmx_A 87 IDS-EFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGVLNADGVADRVTFIVDPNNEIQFVSATAG----------SVG 155 (195)
T ss_dssp SSC-HHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTCBCTTSSBCEEEEEECTTSBEEEEEEECT----------TCC
T ss_pred CCC-HHHHHHHHHHhccccCCceeEEeCCchHHHHHhCCcccCCCccceEEEEcCCCeEEEEEecCC----------CCC
Confidence 985 578888988772 367888888888999999999 9999999999999999854321 011
Q ss_pred HHHHHHHHHhhhhhc
Q 008336 472 ERMKEIDGQYNEMAK 486 (569)
Q Consensus 472 ~~~~~l~~~l~~l~~ 486 (569)
...++|.+.|+++..
T Consensus 156 ~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 156 RNVDEVLRVLDALQS 170 (195)
T ss_dssp CCHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHhh
Confidence 245667777777764
No 120
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.75 E-value=4e-18 Score=154.82 Aligned_cols=119 Identities=18% Similarity=0.321 Sum_probs=94.5
Q ss_pred cccCccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCC-------CCHH
Q 008336 14 LLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD-------EDDE 84 (569)
Q Consensus 14 ~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d-------~~~~ 84 (569)
.+|.++|+| +.+.+|+.+++++++|| +||+||++||++|+.++|.|.++++++++++ +.|++|++| ++.+
T Consensus 7 ~~g~~~p~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~-~~vv~vs~d~~~~~~~~~~~ 85 (170)
T 2p5q_A 7 KNPESVHDFTVKDAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQG-LEILAFPCNQFGEEEPGTND 85 (170)
T ss_dssp ---CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT-EEEEEEECCTTTTCCCSCHH
T ss_pred CCCccccceEEEcCCCCEecHHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCC-EEEEEEECCCCCCCCCCCHH
Confidence 479999999 56789999999999999 9999999999999999999999999998774 999999997 4688
Q ss_pred HHHHHHH-hCCCcccccC--CchhH--HHHH-----HhcCC--CCcc---EEEEECCCCcEEEc
Q 008336 85 AFKGYFS-KMPWLAVPFS--DSETR--DKLD-----ELFKV--MGIP---HLVILDENGKVLSD 133 (569)
Q Consensus 85 ~~~~~~~-~~~~~~~~~~--~~~~~--~~l~-----~~~~v--~~~P---~~~lid~~G~i~~~ 133 (569)
.+++|++ +++..+..+. +.... ..+. ..+++ .++| +++|||++|+|+..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~ 149 (170)
T 2p5q_A 86 QITDFVCTRFKSEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDR 149 (170)
T ss_dssp HHHHHHHHHTCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEE
T ss_pred HHHHHHHHhcCCCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEe
Confidence 8999999 6666554442 22211 1122 12466 7788 99999999999875
No 121
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.75 E-value=8.4e-18 Score=158.17 Aligned_cols=134 Identities=17% Similarity=0.209 Sum_probs=101.2
Q ss_pred cCCcccee-cCC-CCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC-------ChhH
Q 008336 336 SGDLDFVV-GKN-GGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR-------DQTS 406 (569)
Q Consensus 336 ~~~~~f~~-~~~-g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~-------~~~~ 406 (569)
...|+|.+ +.+ |+.++|++++||+|||+|||+||++|+ ++|.|++++++|+++ +++||+|++|. +.+.
T Consensus 33 ~~~pdF~l~d~~~G~~v~Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~--g~~Vlgvs~d~f~~~e~~~~~~ 109 (215)
T 2i3y_A 33 GTIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKPY--GLVVLGFPCNQFGKQEPGDNKE 109 (215)
T ss_dssp CCGGGCEEEBSSSSCEEEGGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGG--TEEEEEEECCCSTTCCCSCHHH
T ss_pred CCcCCcEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccC--CeEEEEEEccccCcCCCCCHHH
Confidence 34689988 999 999999999999999999999999999 999999999999876 79999999762 4567
Q ss_pred HHHHHh------cCCCcccccCchh--hH----H----HHHh-------c--------------CCCCccEEEEECCCCc
Q 008336 407 FDEFFK------GMPWLALPFGDAR--KA----S----LSRK-------F--------------KVSGIPMLVAIGPSGR 449 (569)
Q Consensus 407 ~~~~~~------~~~~~~~~~~~d~--~~----~----l~~~-------~--------------~v~~~Pt~~lid~~G~ 449 (569)
+++|++ +++ +.||++.+. ++ . +... + .|...|++||||++|+
T Consensus 110 i~~f~~~~~~~~~~~-~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G~ 188 (215)
T 2i3y_A 110 ILPGLKYVRPGGGFV-PSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGI 188 (215)
T ss_dssp HHHHHHHTSSCTTCC-CSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTSC
T ss_pred HHHHHHhccchhccC-ccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCCe
Confidence 888988 666 677776431 11 1 1111 1 1233489999999999
Q ss_pred EEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhhcC
Q 008336 450 TITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKG 487 (569)
Q Consensus 450 i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~~~ 487 (569)
|+.+..+. .. .++|.+.|+++++.
T Consensus 189 vv~~~~g~-----------~~---~~~l~~~I~~ll~~ 212 (215)
T 2i3y_A 189 PVMRWSHR-----------AT---VSSVKTDILAYLKQ 212 (215)
T ss_dssp EEEEECTT-----------SC---HHHHHHHHHHHGGG
T ss_pred EEEEeCCC-----------CC---HHHHHHHHHHHHHH
Confidence 99984321 11 24577777777754
No 122
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.75 E-value=2.4e-18 Score=162.06 Aligned_cols=137 Identities=15% Similarity=0.147 Sum_probs=111.2
Q ss_pred cCCcccee-c---CCCCceecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHH
Q 008336 336 SGDLDFVV-G---KNGGKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEF 410 (569)
Q Consensus 336 ~~~~~f~~-~---~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~ 410 (569)
...|+|.+ + .+|+.+++++++||++||+|| ++||++|+.++|.|++++++|+++ +++||+|++| +.+..++|
T Consensus 23 ~~aP~f~l~~~~~~~g~~v~l~d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~--~v~vv~Is~D-~~~~~~~~ 99 (211)
T 2pn8_A 23 MPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI--NTEVVACSVD-SQFTHLAW 99 (211)
T ss_dssp CBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT--TEEEEEEESS-CHHHHHHH
T ss_pred CcCCCeEeecccCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEECC-CHHHHHHH
Confidence 34689987 5 356899999999999999999 999999999999999999999865 7999999997 45678889
Q ss_pred HhcC----C--CcccccCchhhHHHHHhcCCC------CccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHH
Q 008336 411 FKGM----P--WLALPFGDARKASLSRKFKVS------GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEID 478 (569)
Q Consensus 411 ~~~~----~--~~~~~~~~d~~~~l~~~~~v~------~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~ 478 (569)
++.+ + .+.||++.|....+++.|++. .+|++||||++|+|+++..+.. ......+++.
T Consensus 100 ~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~----------~~~~~~~ell 169 (211)
T 2pn8_A 100 INTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDL----------PVGRSVDETL 169 (211)
T ss_dssp HTSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECT----------TBCCCHHHHH
T ss_pred HHHhhhccCccCCceEEEECCchHHHHHcCCcccCCCcccceEEEECCCCEEEEEEecCC----------CCCCCHHHHH
Confidence 8877 1 478898888888999999995 6999999999999999853211 0112456666
Q ss_pred HHhhhhh
Q 008336 479 GQYNEMA 485 (569)
Q Consensus 479 ~~l~~l~ 485 (569)
+.|+.+.
T Consensus 170 ~~l~~l~ 176 (211)
T 2pn8_A 170 RLVQAFQ 176 (211)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 6666654
No 123
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.75 E-value=9.4e-19 Score=161.02 Aligned_cols=119 Identities=16% Similarity=0.209 Sum_probs=94.6
Q ss_pred ccccCccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCC-------CH
Q 008336 13 SLLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDE-------DD 83 (569)
Q Consensus 13 ~~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~-------~~ 83 (569)
..+|.++|+| +.+.+|+.+++++++|| +||+||++|||+|+.++|.|.+++++|++++ +.|++|++|. +.
T Consensus 23 ~~~g~~~p~f~l~~~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~-v~vv~vs~d~~~~~e~~~~ 101 (181)
T 2p31_A 23 MQQEQDFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHH-FNVLAFPCNQFGQQEPDSN 101 (181)
T ss_dssp ----CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT-EEEEEEECCCSTTCCCSCH
T ss_pred CCcCCccCceEeecCCCCEecHHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCC-EEEEEEECcCCCCCCCCCH
Confidence 3579999999 56789999999999999 9999999999999999999999999999875 9999999974 68
Q ss_pred HHHHHHHHh-CCCcccccCC--chh--HHHHHHhcCCCCcc-------EEEEECCCCcEEEc
Q 008336 84 EAFKGYFSK-MPWLAVPFSD--SET--RDKLDELFKVMGIP-------HLVILDENGKVLSD 133 (569)
Q Consensus 84 ~~~~~~~~~-~~~~~~~~~~--~~~--~~~l~~~~~v~~~P-------~~~lid~~G~i~~~ 133 (569)
+.+++|+++ ++..+..+.+ ... ...+ -.|++.++| +++|||++|+|+.+
T Consensus 102 ~~~~~~~~~~~~~~~p~~~~~d~~g~~~~~~-~~~~~~~~P~~~~~~~~~~lid~~G~i~~~ 162 (181)
T 2p31_A 102 KEIESFARRTYSVSFPMFSKIAVTGTGAHPA-FKYLAQTSGKEPTWNFWKYLVAPDGKVVGA 162 (181)
T ss_dssp HHHHHHHHHHHCCCSCBBCCCCCSSTTSCHH-HHHHHHHHSCCCCSTTCEEEECTTSCEEEE
T ss_pred HHHHHHHHhhcCCCceeEeecccCCccchhh-hhhhhhcCCCccccceeEEEEcCCCCEEEE
Confidence 889999998 7766555432 111 1111 134567788 99999999999874
No 124
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.75 E-value=2.2e-19 Score=162.22 Aligned_cols=115 Identities=22% Similarity=0.294 Sum_probs=101.6
Q ss_pred ccCccCCc-eecCCCceeecCCC--CCc-EEEEEe-cCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHH
Q 008336 15 LSSSARDF-LIRSNGDQVKLDSL--KGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGY 89 (569)
Q Consensus 15 ~g~~~pdf-~~~~~g~~v~l~~~--~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~ 89 (569)
+|++||+| +.+.+|+.++|+++ +|| ++|+|| ++|||+|+.++|.|++++++|++.+ +.+++|+.| +.+..++|
T Consensus 7 vG~~aPdF~l~~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~-v~vv~is~d-~~~~~~~~ 84 (164)
T 4gqc_A 7 LGEKAPDFTLPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKAN-AEVLAISVD-SPWCLKKF 84 (164)
T ss_dssp TTSBCCCCEEEBTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSS-SEEEEEESS-CHHHHHHH
T ss_pred CCCCCcCcEeECCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccC-ceEEEecCC-CHHHHHHH
Confidence 79999999 56789999999998 899 888887 9999999999999999999999886 999999997 67888999
Q ss_pred HHhCCCcccccCCchhHHHHHHhcCCC----------CccEEEEECCCCcEEEc
Q 008336 90 FSKMPWLAVPFSDSETRDKLDELFKVM----------GIPHLVILDENGKVLSD 133 (569)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~l~~~~~v~----------~~P~~~lid~~G~i~~~ 133 (569)
.+++++.+..+.|.+. .+++.||+. ..|++||||++|+|++.
T Consensus 85 ~~~~~~~fp~l~D~~~--~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~ 136 (164)
T 4gqc_A 85 KDENRLAFNLLSDYNR--EVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYK 136 (164)
T ss_dssp HHHTTCCSEEEECTTS--HHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEE
T ss_pred HHhcCcccceeecCch--HHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEE
Confidence 9999987776666554 699999984 47899999999999874
No 125
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.75 E-value=3.6e-18 Score=160.05 Aligned_cols=137 Identities=18% Similarity=0.223 Sum_probs=112.5
Q ss_pred cCCcccee-cC--CC--CceecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHH
Q 008336 336 SGDLDFVV-GK--NG--GKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDE 409 (569)
Q Consensus 336 ~~~~~f~~-~~--~g--~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~ 409 (569)
...|+|.+ +. +| +.+++++++||++||+|| ++||++|+.++|.|.+++++|+++ ++.||+|++|. .+..++
T Consensus 10 ~~aP~f~l~~~~~~g~~~~v~l~~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~--~v~vi~Is~D~-~~~~~~ 86 (202)
T 1uul_A 10 HPAPDFNETALMPNGTFKKVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDI--GCEVLACSMDS-EYSHLA 86 (202)
T ss_dssp SBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTT--TEEEEEEESSC-HHHHHH
T ss_pred CcCCCcEeeeeecCCCccEEEHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHC--CCEEEEEeCCC-HHHHHH
Confidence 34689987 65 78 899999999999999999 999999999999999999999865 69999999984 567888
Q ss_pred HHhcC----C--CcccccCchhhHHHHHhcCCC------CccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHH
Q 008336 410 FFKGM----P--WLALPFGDARKASLSRKFKVS------GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEI 477 (569)
Q Consensus 410 ~~~~~----~--~~~~~~~~d~~~~l~~~~~v~------~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l 477 (569)
|++.+ + .+.+|++.|....+++.|++. ++|++||||++|+|+++..+.. . .+...++|
T Consensus 87 ~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~-------~---~~~~~~el 156 (202)
T 1uul_A 87 WTSIERKRGGLGQMNIPILADKTKCIMKSYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDL-------P---VGRDVDEA 156 (202)
T ss_dssp HHHSCGGGTCCCSCSSCEEECTTCHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECT-------T---BCCCHHHH
T ss_pred HHHHHHhhCCCCCCceeEEECCchHHHHHcCCccCCCCceeeEEEEECCCCEEEEEEeCCC-------C---CCCCHHHH
Confidence 88876 1 478888888888999999999 9999999999999999853321 0 11244556
Q ss_pred HHHhhhhh
Q 008336 478 DGQYNEMA 485 (569)
Q Consensus 478 ~~~l~~l~ 485 (569)
.+.|+++.
T Consensus 157 l~~l~~l~ 164 (202)
T 1uul_A 157 LRLVKAFQ 164 (202)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 66666654
No 126
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.75 E-value=3.5e-18 Score=159.62 Aligned_cols=136 Identities=15% Similarity=0.193 Sum_probs=112.6
Q ss_pred CCcccee-cC--CCC---ceecccC-CCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHH
Q 008336 337 GDLDFVV-GK--NGG---KVPVSDL-AGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFD 408 (569)
Q Consensus 337 ~~~~f~~-~~--~g~---~v~l~~~-~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~ 408 (569)
..|+|.+ +. +|+ .++++++ +||++||+|| ++||++|+.++|.|.+++++++++ ++.|++|++|. .+..+
T Consensus 6 ~~P~f~l~~~~~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~Is~d~-~~~~~ 82 (198)
T 1zof_A 6 LAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEK--GFNVIGVSIDS-EQVHF 82 (198)
T ss_dssp BCCCCEEEEECTTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHT--TEEEEEEESSC-HHHHH
T ss_pred cCCceEeecccCCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHc--CCEEEEEECCC-HHHHH
Confidence 4689988 77 898 9999999 9999999999 999999999999999999999875 69999999995 57888
Q ss_pred HHHhcC------CCcccccCchhhHHHHHhcCCC-----CccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHH
Q 008336 409 EFFKGM------PWLALPFGDARKASLSRKFKVS-----GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEI 477 (569)
Q Consensus 409 ~~~~~~------~~~~~~~~~d~~~~l~~~~~v~-----~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l 477 (569)
+|++.+ ..+.+|++.|....+++.|++. ++|+++|||++|+|+.+..+.. + .....++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~---------~-~~~~~~~l 152 (198)
T 1zof_A 83 AWKNTPVEKGGIGQVSFPMVADITKSISRDYDVLFEEAIALRGAFLIDKNMKVRHAVINDL---------P-LGRNADEM 152 (198)
T ss_dssp HHHTSCGGGTCCCCCSSCEEECTTSHHHHHTTCEETTTEECEEEEEEETTTEEEEEEEESS---------S-CCCHHHHH
T ss_pred HHHHhhhhcccccCceeEEEECCchHHHHHhCCcccCCcccceEEEECCCCEEEEEEecCC---------C-CCCCHHHH
Confidence 888872 2367888888888999999999 9999999999999999853311 1 12245566
Q ss_pred HHHhhhhh
Q 008336 478 DGQYNEMA 485 (569)
Q Consensus 478 ~~~l~~l~ 485 (569)
.+.|+++.
T Consensus 153 ~~~l~~l~ 160 (198)
T 1zof_A 153 LRMVDALL 160 (198)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66666654
No 127
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.75 E-value=2.1e-17 Score=143.83 Aligned_cols=112 Identities=29% Similarity=0.552 Sum_probs=95.9
Q ss_pred ccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEe-----CCCCHHHHHHHH
Q 008336 18 SARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVS-----GDEDDEAFKGYF 90 (569)
Q Consensus 18 ~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~-----~d~~~~~~~~~~ 90 (569)
++|+| +.+.+|+.+++++++|| ++|+||++||++|+.++|.|.++++++.. ++.++.|+ .+.+.+.+++|+
T Consensus 1 ~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~v~i~~~~~~~~~~~~~~~~~~ 78 (138)
T 4evm_A 1 EVADFELMGVDGKTYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEAGD--DYVVLTVVSPGHKGEQSEADFKNWY 78 (138)
T ss_dssp CCCCCEEEBTTSCEEEGGGGTTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT--TEEEEEEECTTSTTCCCHHHHHHHH
T ss_pred CCCcceeECCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC--CcEEEEEEcCCCCchhhHHHHHHHH
Confidence 58999 66789999999999999 99999999999999999999999998543 48999994 456889999999
Q ss_pred HhCCC-cccccCCchhHHHHHHhcCCCCccEEEEECCCCcEEEc
Q 008336 91 SKMPW-LAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 91 ~~~~~-~~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 133 (569)
+++++ .+..+.+.. ..+.+.|++.++|+++++|++|+++..
T Consensus 79 ~~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 120 (138)
T 4evm_A 79 KGLDYKNLPVLVDPS--GKLLETYGVRSYPTQAFIDKEGKLVKT 120 (138)
T ss_dssp TTCCCTTCCEEECTT--CHHHHHTTCCSSSEEEEECTTCCEEEE
T ss_pred hhcCCCCeeEEECcc--hHHHHHcCcccCCeEEEECCCCcEEEe
Confidence 99988 433344433 368999999999999999999999864
No 128
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.75 E-value=6.3e-18 Score=156.11 Aligned_cols=116 Identities=21% Similarity=0.241 Sum_probs=99.1
Q ss_pred cccCccCCc-eecC-CC--ceeecCCCCCc-EEEEEec-CCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHH
Q 008336 14 LLSSSARDF-LIRS-NG--DQVKLDSLKGK-IGLYFSA-SWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFK 87 (569)
Q Consensus 14 ~~g~~~pdf-~~~~-~g--~~v~l~~~~gk-vlv~F~a-~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~ 87 (569)
.+|.++|+| +.+. +| +.+++++++|| +||+||+ +||++|+.++|.|++++++|++.+ ++|++|++| +.+..+
T Consensus 2 ~~G~~aP~f~l~~~~~G~~~~v~l~~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~-v~vv~Is~d-~~~~~~ 79 (186)
T 1n8j_A 2 LINTKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLG-VDVYSVSTD-THFTHK 79 (186)
T ss_dssp CTTCBCCCCEEEEEETTEEEEEEHHHHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTT-EEEEEEESS-CHHHHH
T ss_pred CCCCcCCCcEeecccCCcceEEEHHHHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCC-CEEEEEECC-CHHHHH
Confidence 479999999 4456 58 89999999999 9999995 999999999999999999998775 999999998 567789
Q ss_pred HHHHhC----CCcccccCCchhHHHHHHhcCCC------CccEEEEECCCCcEEEc
Q 008336 88 GYFSKM----PWLAVPFSDSETRDKLDELFKVM------GIPHLVILDENGKVLSD 133 (569)
Q Consensus 88 ~~~~~~----~~~~~~~~~~~~~~~l~~~~~v~------~~P~~~lid~~G~i~~~ 133 (569)
+|++++ ++.+..+.|.. ..+.+.|++. .+|+++|||++|+|+..
T Consensus 80 ~~~~~~~~~~~~~fp~l~D~~--~~~~~~ygv~~~~~g~~~p~~~lID~~G~i~~~ 133 (186)
T 1n8j_A 80 AWHSSSETIAKIKYAMIGDPT--GALTRNFDNMREDEGLADRATFVVDPQGIIQAI 133 (186)
T ss_dssp HHHHHCTTGGGCCSEEEECTT--SHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred HHHHHcCcccCCceeEEECCc--hHHHHHhCCccCCCCceeeEEEEECCCCeEEEE
Confidence 999988 55555555533 4688999997 37999999999999975
No 129
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.75 E-value=1e-17 Score=155.99 Aligned_cols=116 Identities=16% Similarity=0.155 Sum_probs=100.2
Q ss_pred cccCccCCc-eecCC-------------C--ceeecCCCCCc-EEEEEe-cCCCHhhHhhHHHHHHHHHHhcCCCCEEEE
Q 008336 14 LLSSSARDF-LIRSN-------------G--DQVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVI 75 (569)
Q Consensus 14 ~~g~~~pdf-~~~~~-------------g--~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv 75 (569)
.+|.++|+| +.+.+ | +.+++++++|| +||+|| ++||++|+.++|.|.+++++|++++ +.|+
T Consensus 5 ~~G~~~P~f~l~~~~~~~~~~~~~~~~~G~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~-v~vv 83 (195)
T 2bmx_A 5 TIGDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRD-AQIL 83 (195)
T ss_dssp CTTCBCCCCEEEEECSSCGGGSCCSSGGGGEEEEETTSSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTT-EEEE
T ss_pred CCCCcCCCcCcccccccccccccccccCCCccEeeHHHhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCC-CEEE
Confidence 469999999 44555 7 89999999999 999999 9999999999999999999998764 9999
Q ss_pred EEeCCCCHHHHHHHHHhC----CCcccccCCchhHHHHHHhcCCC-----CccEEEEECCCCcEEEc
Q 008336 76 FVSGDEDDEAFKGYFSKM----PWLAVPFSDSETRDKLDELFKVM-----GIPHLVILDENGKVLSD 133 (569)
Q Consensus 76 ~v~~d~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~v~-----~~P~~~lid~~G~i~~~ 133 (569)
+|++|. .+..++|++++ ++.+..+.+.. ..+.+.|++. ++|+++|||++|+|+..
T Consensus 84 ~Vs~d~-~~~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~ 147 (195)
T 2bmx_A 84 GVSIDS-EFAHFQWRAQHNDLKTLPFPMLSDIK--RELSQAAGVLNADGVADRVTFIVDPNNEIQFV 147 (195)
T ss_dssp EEESSC-HHHHHHHHHHCTTGGGCCSCEEECTT--SHHHHHHTCBCTTSSBCEEEEEECTTSBEEEE
T ss_pred EEECCC-HHHHHHHHHHhccccCCceeEEeCCc--hHHHHHhCCcccCCCccceEEEEcCCCeEEEE
Confidence 999985 77889999987 55555455533 4788999999 99999999999999875
No 130
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.75 E-value=4.7e-18 Score=156.94 Aligned_cols=119 Identities=18% Similarity=0.168 Sum_probs=96.0
Q ss_pred cccCccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCC-------CHH
Q 008336 14 LLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDE-------DDE 84 (569)
Q Consensus 14 ~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~-------~~~ 84 (569)
.+|.++|+| +.+.+|+.+++++++|| +||+||++|||+|+.++|.|+++++++++++ ++|++|++|. +.+
T Consensus 24 ~~g~~~p~f~l~~~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~-v~vv~is~d~~~~~~~~~~~ 102 (185)
T 2gs3_A 24 RCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECG-LRILAFPCNQFGKQEPGSNE 102 (185)
T ss_dssp GGCCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT-EEEEEEECCTTTTCCCSCHH
T ss_pred cCCCCcCCceeEcCCCCEeeHHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCC-eEEEEEECcccCCCCCCCHH
Confidence 469999999 56789999999999999 9999999999999999999999999998875 9999999873 578
Q ss_pred HHHHHHHhCCCcccccCC--chh--HHHHHHhc-------C-----CCCccEEEEECCCCcEEEc
Q 008336 85 AFKGYFSKMPWLAVPFSD--SET--RDKLDELF-------K-----VMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~--~~~--~~~l~~~~-------~-----v~~~P~~~lid~~G~i~~~ 133 (569)
.+++|+++++..+..+.+ ... ...+...+ + ++.+|+++|||++|+|+..
T Consensus 103 ~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~ 167 (185)
T 2gs3_A 103 EIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKR 167 (185)
T ss_dssp HHHHHHHHTTCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEE
T ss_pred HHHHHHHHcCCCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEe
Confidence 899999998876554432 111 11122211 4 3447999999999999875
No 131
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.75 E-value=2e-18 Score=156.46 Aligned_cols=132 Identities=17% Similarity=0.111 Sum_probs=109.1
Q ss_pred CCcccee-cCCCCceecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcC
Q 008336 337 GDLDFVV-GKNGGKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGM 414 (569)
Q Consensus 337 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~ 414 (569)
..|+|.+ +.+|+.+++++++||+++|+|| ++||++|+.++|.|++++++ .++.|++|+.| +++.+++|.+++
T Consensus 25 ~aP~f~l~~~~G~~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-----~~~~vv~is~d-~~~~~~~~~~~~ 98 (166)
T 3p7x_A 25 FAPDFTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK-----EEGIVLTISAD-LPFAQKRWCASA 98 (166)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT-----TTSEEEEEESS-CHHHHHHHHHHH
T ss_pred CCCCeEEEcCCCCEEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc-----CCCEEEEEECC-CHHHHHHHHHHc
Confidence 4589988 9999999999999999999999 78999999999999998877 25999999998 567889999988
Q ss_pred CCcccccCchh-hHHHHHhcCCCC------ccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhh
Q 008336 415 PWLALPFGDAR-KASLSRKFKVSG------IPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNE 483 (569)
Q Consensus 415 ~~~~~~~~~d~-~~~l~~~~~v~~------~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~ 483 (569)
+.-.+|++.|. ...+++.|++.. +|++||||++|+|++++.... +....+.+++.+.|++
T Consensus 99 ~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~~~~---------~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 99 GLDNVITLSDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKEIVSE---------GTDFPDFDAALAAYKN 165 (166)
T ss_dssp TCSSCEEEECTTTCHHHHHHTCEETTTTEECCEEEEECTTCBEEEEEECSB---------TTSCCCHHHHHHHHHT
T ss_pred CCCceEEccCCchhHHHHHhCCccccCCceeeEEEEECCCCeEEEEEEcCC---------cccCCCHHHHHHHHhc
Confidence 74378988888 889999999986 899999999999999853221 1223345666666653
No 132
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.75 E-value=3.4e-18 Score=172.48 Aligned_cols=115 Identities=16% Similarity=0.259 Sum_probs=104.9
Q ss_pred CCccce-----e-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC-----CChh
Q 008336 337 GDLDFV-----V-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSD-----RDQT 405 (569)
Q Consensus 337 ~~~~f~-----~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d-----~~~~ 405 (569)
..|+|. + +.+|+.+++++++||++||+||++||++|+.++|.|++++++++++ ++.||+|++| .+++
T Consensus 56 ~aPdF~~~~~wL~d~dG~~vsLsdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~--~v~vi~Vs~d~~~~~d~~~ 133 (352)
T 2hyx_A 56 TAPDLKGITGWLNTPGNKPIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDS--GLAVIGVHTPEYAFEKVPG 133 (352)
T ss_dssp BCCCCCSCCEEESSGGGCCCCGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG--TEEEEEEECCSSGGGGCHH
T ss_pred cCCCccccccccCCCCCCEEcHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcC--CeEEEEEECCcccccCCHH
Confidence 358888 7 8899999999999999999999999999999999999999999875 6999999986 4678
Q ss_pred HHHHHHhcCCCcccccCchhhHHHHHhcCCCCccEEEEECCCCcEEEcc
Q 008336 406 SFDEFFKGMPWLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~ 454 (569)
.+++|+++++ +.+|+..|....+++.|+|.++|+++|||++|+|+.+.
T Consensus 134 ~~~~~~~~~~-l~fpv~~D~~~~l~~~ygV~~~Pt~~lID~~G~Iv~~~ 181 (352)
T 2hyx_A 134 NVAKGAANLG-ISYPIALDNNYATWTNYRNRYWPAEYLIDATGTVRHIK 181 (352)
T ss_dssp HHHHHHHHHT-CCSCEEECTTSHHHHHTTCCEESEEEEECTTSBEEEEE
T ss_pred HHHHHHHHcC-CCccEEeCCcHHHHHHcCCCccCEEEEEeCCCeEEEEE
Confidence 8999999887 67888888888999999999999999999999999984
No 133
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.75 E-value=3.6e-18 Score=159.15 Aligned_cols=117 Identities=17% Similarity=0.305 Sum_probs=104.0
Q ss_pred cccCccCCc-ee-cCCCceeecCCCCCc--EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCC-------CC
Q 008336 14 LLSSSARDF-LI-RSNGDQVKLDSLKGK--IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD-------ED 82 (569)
Q Consensus 14 ~~g~~~pdf-~~-~~~g~~v~l~~~~gk--vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d-------~~ 82 (569)
.+|.++|+| +. +.+|+.+++++++|| +||+||++||++|+.++|.|.++++++.+++ +.+++|++| ++
T Consensus 19 ~~g~~~p~f~l~~~~~G~~~~l~~~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~-v~vv~v~~d~~~~~~~d~ 97 (196)
T 2ywi_A 19 PLGKQAPPFALTNVIDGNVVRLEDVKSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKG-VSFVAINSNDAEQYPEDS 97 (196)
T ss_dssp CTTCBCCCCEEEETTTCCEEEHHHHCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGT-CEEEEEECSCTTTCGGGS
T ss_pred CcCCcCCceeeeecCCCCEEeHHHhCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCC-cEEEEEECCccccccccC
Confidence 579999999 66 789999999999997 9999999999999999999999999998774 999999997 57
Q ss_pred HHHHHHHHHhCCCcccccCCchhHHHHHHhcCCCCccEEEEECCCCcEEEc
Q 008336 83 DEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 133 (569)
.+.+++|+++++..+..+.+.. ..+.+.|++.++|+++|||++|+++..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 146 (196)
T 2ywi_A 98 PENMKKVAEELGYPFPYLYDET--QEVAKAYDAACTPDFYIFDRDLKCVYR 146 (196)
T ss_dssp HHHHHHHHHHHTCCSCEEECSS--CHHHHHHTCCEESEEEEEETTCBEEEE
T ss_pred HHHHHHHHHHcCCCceEEECCc--hHHHHHhCCCCCCeEEEEcCCCeEEEc
Confidence 8899999999887666555543 368899999999999999999999875
No 134
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.75 E-value=5.4e-18 Score=156.22 Aligned_cols=116 Identities=14% Similarity=0.172 Sum_probs=95.2
Q ss_pred cCCcccee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC-------CChhHH
Q 008336 336 SGDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSD-------RDQTSF 407 (569)
Q Consensus 336 ~~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d-------~~~~~~ 407 (569)
...|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|++++++++++ ++.|++|++| .+.+.+
T Consensus 25 ~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~--~v~vv~vs~d~~~~~e~~~~~~~ 102 (183)
T 2obi_A 25 RSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAEC--GLRILAFPCNQFGKQEPGSNEEI 102 (183)
T ss_dssp CSGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCCSTTCCCSCHHHH
T ss_pred CcccceEEEcCCCCEeeHHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcC--CeEEEEEECCCCCCCCCCCHHHH
Confidence 34589988 9999999999999999999999999999999999999999999876 6999999987 367789
Q ss_pred HHHHhcCCCcccccCc--hhhHH----HHHhc-------C-----CCCccEEEEECCCCcEEEcc
Q 008336 408 DEFFKGMPWLALPFGD--ARKAS----LSRKF-------K-----VSGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 408 ~~~~~~~~~~~~~~~~--d~~~~----l~~~~-------~-----v~~~Pt~~lid~~G~i~~~~ 454 (569)
++|+++++ +.+|+.. |.+.. +.+.+ + ++.+|+++|||++|+|+.+.
T Consensus 103 ~~~~~~~~-~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~ 166 (183)
T 2obi_A 103 KEFAAGYN-VKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRY 166 (183)
T ss_dssp HHHHHTTT-CCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEE
T ss_pred HHHHHHcC-CCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEe
Confidence 99998887 5577654 32222 22111 4 45579999999999999984
No 135
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.74 E-value=5.6e-18 Score=161.03 Aligned_cols=117 Identities=20% Similarity=0.251 Sum_probs=101.7
Q ss_pred cCCcccee-cC---CCCceecccCCCCEEEEEEec-CCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHH
Q 008336 336 SGDLDFVV-GK---NGGKVPVSDLAGKTILLYFSA-HWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEF 410 (569)
Q Consensus 336 ~~~~~f~~-~~---~g~~v~l~~~~gk~vll~F~a-~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~ 410 (569)
...|+|.+ +. +|+++++++++||++||+||+ +||++|+.++|.|++++++|+++ ++.||+|++|. .+...+|
T Consensus 44 ~~aP~f~l~~~~d~~G~~v~l~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~--~v~vv~Is~D~-~~~~~~~ 120 (222)
T 3ztl_A 44 RPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSR--NCQVIACSTDS-QYSHLAW 120 (222)
T ss_dssp EECCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTT--TEEEEEEESSC-HHHHHHH
T ss_pred CCCCCeEEecccCCCCcEEeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHC--CCEEEEEECCC-HHHHHHH
Confidence 34689987 43 559999999999999999996 99999999999999999999865 69999999985 4566777
Q ss_pred HhcC------CCcccccCchhhHHHHHhcCCC------CccEEEEECCCCcEEEccc
Q 008336 411 FKGM------PWLALPFGDARKASLSRKFKVS------GIPMLVAIGPSGRTITKEA 455 (569)
Q Consensus 411 ~~~~------~~~~~~~~~d~~~~l~~~~~v~------~~Pt~~lid~~G~i~~~~~ 455 (569)
.+.+ ..+.+|++.|....+++.|++. .+|++||||++|+|+++..
T Consensus 121 ~~~~~~~~~~~~~~~~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~I~~~~~ 177 (222)
T 3ztl_A 121 DNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITI 177 (222)
T ss_dssp HHSCGGGTSCCSCSSCEEECSSSHHHHHTTCBCTTTSSBCEEEEEECTTSEEEEEEE
T ss_pred HHHhhhhccccccceeEEeCCchHHHHHcCCeecCCCCccceEEEECCCCeEEEEEe
Confidence 7765 2578899888889999999999 8999999999999999854
No 136
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.74 E-value=3e-17 Score=156.55 Aligned_cols=182 Identities=13% Similarity=0.186 Sum_probs=116.3
Q ss_pred CCCCc-EEEEEecC-CCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHh
Q 008336 35 SLKGK-IGLYFSAS-WCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDEL 112 (569)
Q Consensus 35 ~~~gk-vlv~F~a~-wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 112 (569)
...++ ++++||++ ||++|+.+.|.+.++++. . +++.++.|+++.... ..+++.
T Consensus 19 ~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~--~~v~~~~vd~~~~~~----------------------~~~~~~ 73 (226)
T 1a8l_A 19 KMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-T--DKLSYEIVDFDTPEG----------------------KELAKR 73 (226)
T ss_dssp GCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-C--TTEEEEEEETTSHHH----------------------HHHHHH
T ss_pred hcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh-C--CceEEEEEeCCCccc----------------------HHHHHH
Confidence 45567 88999999 999999999999998754 2 359999999885111 358999
Q ss_pred cCCCCccEEEEECCCCcEEEcCCcceeecccCCCCCccHHHHHHHHHHHHHHHhhcccccccccCCCceeecCCCceeee
Q 008336 113 FKVMGIPHLVILDENGKVLSDGGVEIIREYGVEGYPFTVERIKEMKEQEERAKREQSLRSVLTSHSRDFVISSDGRKISV 192 (569)
Q Consensus 113 ~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~ 192 (569)
|+|.++|+++++ ++|+... .+..|. .....+..++......... . ...+++.+..
T Consensus 74 ~~v~~~Pt~~~~-~~g~~~~------~~~~G~----~~~~~l~~~l~~~l~~~~~--~------------~~l~~~~~~~ 128 (226)
T 1a8l_A 74 YRIDRAPATTIT-QDGKDFG------VRYFGL----PAGHEFAAFLEDIVDVSRE--E------------TNLMDETKQA 128 (226)
T ss_dssp TTCCSSSEEEEE-ETTBCCS------EEEESC----CCTTHHHHHHHHHHHHHHT--C------------CCCCHHHHHH
T ss_pred cCCCcCceEEEE-cCCceee------EEEecc----CcHHHHHHHHHHHHhhcCC--C------------CCCCHHHHHH
Confidence 999999999999 4553210 011111 1122333333221110000 0 0011111111
Q ss_pred -ccccCcEEEEEEecCCcccchhhhHHHHHHHHHHhcCC-CceEEEEeeccccHHHHHHHhcCCCcccccCCchhHHHHH
Q 008336 193 -SDLEGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKG-ESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLA 270 (569)
Q Consensus 193 -~~~~gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~-~~~ei~~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~l~ 270 (569)
....++.+++.|+++||++|+.+.|.+.+++..+..++ ..+.++.++.+. ...++
T Consensus 129 ~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~-----------------------~~~l~ 185 (226)
T 1a8l_A 129 IRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIE-----------------------YPEWA 185 (226)
T ss_dssp HTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGG-----------------------CHHHH
T ss_pred HHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEccc-----------------------CHHHH
Confidence 11234555999999999999999999999999887321 134444444433 35688
Q ss_pred hhcccCCCceEEEECCCCCc
Q 008336 271 RYFELSTLPTLVIIGPDGKT 290 (569)
Q Consensus 271 ~~f~v~~~Ptlvi~~~~g~~ 290 (569)
+.|+|.++||++++. +|+.
T Consensus 186 ~~~~v~~~Pt~~~~~-~G~~ 204 (226)
T 1a8l_A 186 DQYNVMAVPKIVIQV-NGED 204 (226)
T ss_dssp HHTTCCSSCEEEEEE-TTEE
T ss_pred HhCCCcccCeEEEEe-CCce
Confidence 999999999999885 5543
No 137
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.74 E-value=3e-18 Score=154.14 Aligned_cols=114 Identities=15% Similarity=0.197 Sum_probs=101.8
Q ss_pred cCCcccee-cCCCCceecccCCCC--EEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHH
Q 008336 336 SGDLDFVV-GKNGGKVPVSDLAGK--TILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFF 411 (569)
Q Consensus 336 ~~~~~f~~-~~~g~~v~l~~~~gk--~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~ 411 (569)
...|+|.+ +.+|+++++++++|| ++||+|| ++||++|+.++|.|.+++++++++ + .|++|++| +++..++|+
T Consensus 11 ~~~P~f~l~~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~--~-~vv~is~d-~~~~~~~~~ 86 (159)
T 2a4v_A 11 DPIPDLSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEY--A-AVFGLSAD-SVTSQKKFQ 86 (159)
T ss_dssp CBCCSCEEECTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTT--C-EEEEEESC-CHHHHHHHH
T ss_pred CCCCCeEEECCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhC--C-cEEEEeCC-CHHHHHHHH
Confidence 34589988 999999999999987 8999997 999999999999999999999876 5 99999999 567888999
Q ss_pred hcCCCcccccCchhhHHHHHhcCCCCcc------EEEEECCCCcEEEccc
Q 008336 412 KGMPWLALPFGDARKASLSRKFKVSGIP------MLVAIGPSGRTITKEA 455 (569)
Q Consensus 412 ~~~~~~~~~~~~d~~~~l~~~~~v~~~P------t~~lid~~G~i~~~~~ 455 (569)
++++ +.+|++.|....+++.|++...| ++||| ++|+|+++..
T Consensus 87 ~~~~-~~~~~l~D~~~~~~~~~gv~~~p~~g~~~~~~li-~~G~i~~~~~ 134 (159)
T 2a4v_A 87 SKQN-LPYHLLSDPKREFIGLLGAKKTPLSGSIRSHFIF-VDGKLKFKRV 134 (159)
T ss_dssp HHHT-CSSEEEECTTCHHHHHHTCBSSSSSCBCCEEEEE-ETTEEEEEEE
T ss_pred HHhC-CCceEEECCccHHHHHhCCcccccCCccceEEEE-cCCEEEEEEc
Confidence 8887 57898888888999999999998 89999 9999999853
No 138
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.74 E-value=5.8e-18 Score=157.98 Aligned_cols=137 Identities=19% Similarity=0.216 Sum_probs=112.1
Q ss_pred cCCcccee-cC-CC--CceecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHH
Q 008336 336 SGDLDFVV-GK-NG--GKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEF 410 (569)
Q Consensus 336 ~~~~~f~~-~~-~g--~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~ 410 (569)
...|+|.+ +. +| +.+++++++||++||+|| ++||++|+.++|.|.+++++++++ ++.||+|++|. .+...+|
T Consensus 9 ~~aP~f~l~~~~~g~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~Is~d~-~~~~~~~ 85 (197)
T 1qmv_A 9 KPAPDFKATAVVDGAFKEVKLSDYKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKL--GCEVLGVSVDS-QFTHLAW 85 (197)
T ss_dssp SBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT--TEEEEEEESSC-HHHHHHH
T ss_pred CCCCCeEeEeecCCCccEEEHHHHCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEECCC-HHHHHHH
Confidence 34689987 66 78 999999999999999999 999999999999999999999865 69999999985 4667788
Q ss_pred HhcC------CCcccccCchhhHHHHHhcCCC------CccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHH
Q 008336 411 FKGM------PWLALPFGDARKASLSRKFKVS------GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEID 478 (569)
Q Consensus 411 ~~~~------~~~~~~~~~d~~~~l~~~~~v~------~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~ 478 (569)
++.+ ..+.+|++.|...++++.|++. ++|+++|||++|+|+.+..+.. + .+...+++.
T Consensus 86 ~~~~~~~~~~~~~~~p~l~D~~~~~~~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~---------~-~~~~~~e~l 155 (197)
T 1qmv_A 86 INTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDL---------P-VGRSVDEAL 155 (197)
T ss_dssp HTSCGGGTCCCSCSSCEEECTTCHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECT---------T-BCCCHHHHH
T ss_pred HHHHHhhCCCCCCceEEEECCcHHHHHHcCCccCCCCceeeEEEEECCCCcEEEEEeCCC---------C-CCCCHHHHH
Confidence 8766 2477888888888999999998 8999999999999999853321 0 123455666
Q ss_pred HHhhhhh
Q 008336 479 GQYNEMA 485 (569)
Q Consensus 479 ~~l~~l~ 485 (569)
+.|+.+.
T Consensus 156 ~~l~~l~ 162 (197)
T 1qmv_A 156 RLVQAFQ 162 (197)
T ss_dssp HHHHHHH
T ss_pred HHHHhcc
Confidence 6666553
No 139
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.74 E-value=7.2e-18 Score=153.83 Aligned_cols=120 Identities=22% Similarity=0.336 Sum_probs=99.3
Q ss_pred cccCccCCc-eecCCCceeecCCCCCc-EEEEEecCCCH-hhHhhHHHHHHHHHHhcCCC-CEEEEEEeCC---CCHHHH
Q 008336 14 LLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCG-PCQRFTPILAEVYNELSRQG-DFEVIFVSGD---EDDEAF 86 (569)
Q Consensus 14 ~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~-~C~~~~p~l~~~~~~~~~~g-~~~vv~v~~d---~~~~~~ 86 (569)
.+|.++|+| +.+.+|+.+++++++|| +||+||++||+ +|+.++|.|.++++++++.+ ++.|++|++| ++.+.+
T Consensus 8 ~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~ 87 (174)
T 1xzo_A 8 PLNYEVEPFTFQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQL 87 (174)
T ss_dssp CCCEECCCCEEECTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHH
T ss_pred ccccccCCcEEEcCCCCEEehhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHH
Confidence 479999999 56789999999999999 99999999999 99999999999999998775 5999999998 578899
Q ss_pred HHHHHhCCCcc---cccCCchh--HHHHHH------------hcCCCCccEEEEECCCCcEEEc
Q 008336 87 KGYFSKMPWLA---VPFSDSET--RDKLDE------------LFKVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 87 ~~~~~~~~~~~---~~~~~~~~--~~~l~~------------~~~v~~~P~~~lid~~G~i~~~ 133 (569)
++|+++++..+ ..+.+.+. ...+.. .|++..+|+++|||++|+|+..
T Consensus 88 ~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~ 151 (174)
T 1xzo_A 88 KKFAANYPLSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKD 151 (174)
T ss_dssp HHHHTTSCCCGGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEE
T ss_pred HHHHHHcCCCCcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEE
Confidence 99999998766 33444222 112221 1457889999999999999874
No 140
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.74 E-value=1.1e-17 Score=157.85 Aligned_cols=116 Identities=18% Similarity=0.226 Sum_probs=100.7
Q ss_pred cccCccCCc-eecC--CC--ceeecCCC-CCc-EEEEEe-cCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHH
Q 008336 14 LLSSSARDF-LIRS--NG--DQVKLDSL-KGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEA 85 (569)
Q Consensus 14 ~~g~~~pdf-~~~~--~g--~~v~l~~~-~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~ 85 (569)
.+|.++|+| +.+. +| +.++++++ +|| +||+|| ++||++|+.++|.|.+++++|++.+ ++||+|++| +.+.
T Consensus 22 ~~G~~aP~f~l~~~~~~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~-v~vv~Is~D-~~~~ 99 (213)
T 2i81_A 22 YVGKEAPFFKAEAVFGDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERN-VELLGCSVD-SKYT 99 (213)
T ss_dssp CBTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTT-EEEEEEESS-CHHH
T ss_pred cCCCcCCCeEeeccccCCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCC-CEEEEEeCC-CHHH
Confidence 579999999 4566 89 89999999 999 999999 9999999999999999999998764 999999998 6778
Q ss_pred HHHHHHhC-------CCcccccCCchhHHHHHHhcCCC-----CccEEEEECCCCcEEEc
Q 008336 86 FKGYFSKM-------PWLAVPFSDSETRDKLDELFKVM-----GIPHLVILDENGKVLSD 133 (569)
Q Consensus 86 ~~~~~~~~-------~~~~~~~~~~~~~~~l~~~~~v~-----~~P~~~lid~~G~i~~~ 133 (569)
.++|+++. ++.+..+.|.. ..+.+.|++. .+|+++|||++|+|+..
T Consensus 100 ~~~~~~~~~~~~g~~~~~fp~l~D~~--~~~~~~ygv~~~~g~~~p~~~lID~~G~i~~~ 157 (213)
T 2i81_A 100 HLAWKKTPLAKGGIGNIKHTLLSDIT--KSISKDYNVLFDDSVSLRAFVLIDMNGIVQHL 157 (213)
T ss_dssp HHHHHSSCGGGTCCCSCSSEEEECTT--SHHHHHTTCEETTTEECEEEEEECTTSBEEEE
T ss_pred HHHHHHHHHhhCCccCCCceEEECCc--hHHHHHhCCccccCCcccEEEEECCCCEEEEE
Confidence 88998877 44554455533 4799999999 89999999999999975
No 141
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.74 E-value=7.7e-18 Score=152.99 Aligned_cols=118 Identities=15% Similarity=0.178 Sum_probs=99.0
Q ss_pred ccccccCccCCc-ee-cCCCceeecCC-CCCc-EEEEE-ecCCCHhhH-hhHHHHHHHHHHhcCCCCEEEEE-EeCCCCH
Q 008336 11 IQSLLSSSARDF-LI-RSNGDQVKLDS-LKGK-IGLYF-SASWCGPCQ-RFTPILAEVYNELSRQGDFEVIF-VSGDEDD 83 (569)
Q Consensus 11 ~~~~~g~~~pdf-~~-~~~g~~v~l~~-~~gk-vlv~F-~a~wC~~C~-~~~p~l~~~~~~~~~~g~~~vv~-v~~d~~~ 83 (569)
.+..+|.++|+| +. +.+|+.++|++ ++|| ++|+| |++|||+|+ .++|.|.+++++|++.| ++||+ |+.| +.
T Consensus 13 ~~~~vG~~aPdf~l~~~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~g-v~vv~~iS~D-~~ 90 (173)
T 3mng_A 13 APIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKG-VQVVACLSVN-DA 90 (173)
T ss_dssp CCCCTTCBCCCCEEECSSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTT-CCEEEEEESS-CH
T ss_pred CCCCCCCCCCCeEeeeCCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCC-CEEEEEEcCC-CH
Confidence 444789999999 55 67999999999 6999 66555 699999999 59999999999999886 89997 9988 57
Q ss_pred HHHHHHHHhCCCc--ccccCCchhHHHHHHhcCCC-------------CccEEEEECCCCcEEEc
Q 008336 84 EAFKGYFSKMPWL--AVPFSDSETRDKLDELFKVM-------------GIPHLVILDENGKVLSD 133 (569)
Q Consensus 84 ~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~v~-------------~~P~~~lid~~G~i~~~ 133 (569)
...++|+++.+.. +..+.|.+ ..+++.||+. ..|++|||| +|+|++.
T Consensus 91 ~~~~~f~~~~~~~~~fp~l~D~~--~~va~~yGv~~~~~~~~~~g~~~~~r~tfvID-dG~I~~~ 152 (173)
T 3mng_A 91 FVTGEWGRAHKAEGKVRLLADPT--GAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ-DGIVKAL 152 (173)
T ss_dssp HHHHHHHHHTTCTTTCEEEECTT--CHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE-TTEEEEE
T ss_pred HHHHHHHHHhCCCCceEEEECCC--hHHHHHhCCCcccccccccCCcceEEEEEEEE-CCEEEEE
Confidence 8889999999876 55556654 4789999985 359999999 9999874
No 142
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.74 E-value=1.2e-17 Score=151.91 Aligned_cols=119 Identities=27% Similarity=0.291 Sum_probs=100.5
Q ss_pred ccCccC-Cc-eecCCCceeecCCCCCc-EEEEEecCCCH-hhHhhHHHHHHHHHHhcCCC-CEEEEEEeCC--CCHHHHH
Q 008336 15 LSSSAR-DF-LIRSNGDQVKLDSLKGK-IGLYFSASWCG-PCQRFTPILAEVYNELSRQG-DFEVIFVSGD--EDDEAFK 87 (569)
Q Consensus 15 ~g~~~p-df-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~-~C~~~~p~l~~~~~~~~~~g-~~~vv~v~~d--~~~~~~~ 87 (569)
+|.++| +| +.+.+|+.+++++++|| +||+||++||+ .|..++|.|+++++++.+.+ ++++++|++| ++.+.++
T Consensus 3 ~G~~~P~~f~l~d~~G~~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~ 82 (170)
T 3me7_A 3 LGTYVPGDITLVDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIK 82 (170)
T ss_dssp TTCBCCTTCEEEETTCCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHH
T ss_pred CCCcCCCCeEEEcCCcCEEchHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHH
Confidence 699999 99 66789999999999999 99999999997 79999999999999997533 6999999998 5788999
Q ss_pred HHHHhCCCcccc----c-CCchhHHHHHHhcCC---------CCccEEEEECCCCcEEEc
Q 008336 88 GYFSKMPWLAVP----F-SDSETRDKLDELFKV---------MGIPHLVILDENGKVLSD 133 (569)
Q Consensus 88 ~~~~~~~~~~~~----~-~~~~~~~~l~~~~~v---------~~~P~~~lid~~G~i~~~ 133 (569)
+|+++++..... + .+.+....+++.||+ ...|+++|||++|+|+..
T Consensus 83 ~~~~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~ 142 (170)
T 3me7_A 83 RFQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDY 142 (170)
T ss_dssp HHHHHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEE
T ss_pred HHHHHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEE
Confidence 999999865432 2 344555678888774 456899999999999863
No 143
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.74 E-value=9.3e-18 Score=156.71 Aligned_cols=116 Identities=18% Similarity=0.235 Sum_probs=100.2
Q ss_pred cccCccCCc-eecC--CCc---eeecCCC-CCc-EEEEEe-cCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHH
Q 008336 14 LLSSSARDF-LIRS--NGD---QVKLDSL-KGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDE 84 (569)
Q Consensus 14 ~~g~~~pdf-~~~~--~g~---~v~l~~~-~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~ 84 (569)
.+|.++|+| +.+. +|+ .++++++ +|| ++|+|| ++||++|+.++|.|.+++++|++.+ +.|++|++|. .+
T Consensus 2 ~~G~~~P~f~l~~~~~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~-v~vv~Is~d~-~~ 79 (198)
T 1zof_A 2 VVTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKG-FNVIGVSIDS-EQ 79 (198)
T ss_dssp CTTSBCCCCEEEEECTTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTT-EEEEEEESSC-HH
T ss_pred CCCCcCCceEeecccCCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcC-CEEEEEECCC-HH
Confidence 369999999 5566 898 9999999 999 999999 9999999999999999999998774 9999999984 67
Q ss_pred HHHHHHHh-------CCCcccccCCchhHHHHHHhcCCC-----CccEEEEECCCCcEEEc
Q 008336 85 AFKGYFSK-------MPWLAVPFSDSETRDKLDELFKVM-----GIPHLVILDENGKVLSD 133 (569)
Q Consensus 85 ~~~~~~~~-------~~~~~~~~~~~~~~~~l~~~~~v~-----~~P~~~lid~~G~i~~~ 133 (569)
..++|+++ +++.+..+.+.. ..+.+.|++. ++|+++|||++|+|+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~ 138 (198)
T 1zof_A 80 VHFAWKNTPVEKGGIGQVSFPMVADIT--KSISRDYDVLFEEAIALRGAFLIDKNMKVRHA 138 (198)
T ss_dssp HHHHHHTSCGGGTCCCCCSSCEEECTT--SHHHHHTTCEETTTEECEEEEEEETTTEEEEE
T ss_pred HHHHHHHhhhhcccccCceeEEEECCc--hHHHHHhCCcccCCcccceEEEECCCCEEEEE
Confidence 88889887 555554444433 4688999999 99999999999999874
No 144
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.74 E-value=8.9e-18 Score=156.01 Aligned_cols=115 Identities=17% Similarity=0.242 Sum_probs=99.7
Q ss_pred ccCccCCc-eecC--CC--ceeecCCC-CCc-EEEEEe-cCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHH
Q 008336 15 LSSSARDF-LIRS--NG--DQVKLDSL-KGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAF 86 (569)
Q Consensus 15 ~g~~~pdf-~~~~--~g--~~v~l~~~-~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~ 86 (569)
+|+++|+| +.+. +| +.++++++ +|| +||+|| ++||++|+.++|.|.+++++|++.+ +.|++|++| +.+..
T Consensus 2 ~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~-v~vv~Is~d-~~~~~ 79 (192)
T 2h01_A 2 FQGQAPSFKAEAVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERN-VELLGCSVD-SKFTH 79 (192)
T ss_dssp CSSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTT-EEEEEEESS-CHHHH
T ss_pred CCCcCCCcEeEeeecCCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC-CEEEEEEeC-CHHHH
Confidence 69999999 5566 89 99999999 999 999999 9999999999999999999998765 999999998 57788
Q ss_pred HHHHHhC-------CCcccccCCchhHHHHHHhcCCC-----CccEEEEECCCCcEEEc
Q 008336 87 KGYFSKM-------PWLAVPFSDSETRDKLDELFKVM-----GIPHLVILDENGKVLSD 133 (569)
Q Consensus 87 ~~~~~~~-------~~~~~~~~~~~~~~~l~~~~~v~-----~~P~~~lid~~G~i~~~ 133 (569)
++|++++ ++.+..+.+.. ..+.+.|++. .+|+++|||++|+|+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~l~D~~--~~~~~~~gv~~~~g~~~P~~~liD~~G~i~~~ 136 (192)
T 2h01_A 80 LAWKKTPLSQGGIGNIKHTLISDIS--KSIARSYDVLFNESVALRAFVLIDKQGVVQHL 136 (192)
T ss_dssp HHHHTSCGGGTCCCSCSSEEEECTT--SHHHHHTTCEETTTEECCEEEEECTTSBEEEE
T ss_pred HHHHHhHHhhCCccCCCcCeEECCc--HHHHHHhCCcCcCCceeeEEEEEcCCCEEEEE
Confidence 8998877 44444444433 4789999999 89999999999999875
No 145
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.74 E-value=1e-17 Score=157.73 Aligned_cols=116 Identities=18% Similarity=0.221 Sum_probs=98.3
Q ss_pred cccCccCCcee-cC---CCceeecCCCCCc-EEEEEe-cCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHH
Q 008336 14 LLSSSARDFLI-RS---NGDQVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFK 87 (569)
Q Consensus 14 ~~g~~~pdf~~-~~---~g~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~ 87 (569)
.+|.++|+|.+ +. +|+.+++++++|| +||+|| ++||++|+.++|.|++++++|++.+ ++||+|++| +.+..+
T Consensus 20 ~~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~-v~vv~Is~D-~~~~~~ 97 (211)
T 2pn8_A 20 FQSMPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSIN-TEVVACSVD-SQFTHL 97 (211)
T ss_dssp CSSCBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTT-EEEEEEESS-CHHHHH
T ss_pred CCCCcCCCeEeecccCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC-CEEEEEECC-CHHHHH
Confidence 57999999944 43 4689999999999 999999 9999999999999999999998775 999999997 567788
Q ss_pred HHHHhC-------CCcccccCCchhHHHHHHhcCCC------CccEEEEECCCCcEEEc
Q 008336 88 GYFSKM-------PWLAVPFSDSETRDKLDELFKVM------GIPHLVILDENGKVLSD 133 (569)
Q Consensus 88 ~~~~~~-------~~~~~~~~~~~~~~~l~~~~~v~------~~P~~~lid~~G~i~~~ 133 (569)
+|+++. ++.+..+.|.. ..+.+.|++. .+|++||||++|+|+..
T Consensus 98 ~~~~~~~~~~g~~~~~fp~l~D~~--~~~~~~ygv~~~~~g~~~p~~~lID~~G~I~~~ 154 (211)
T 2pn8_A 98 AWINTPRRQGGLGPIRIPLLSDLT--HQISKDYGVYLEDSGHTLRGLFIIDDKGILRQI 154 (211)
T ss_dssp HHHTSCGGGTCCCSCSSCEEECTT--SHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred HHHHHhhhccCccCCceEEEECCc--hHHHHHcCCcccCCCcccceEEEECCCCEEEEE
Confidence 898877 44444445543 4789999995 69999999999999975
No 146
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.74 E-value=3.6e-18 Score=158.40 Aligned_cols=118 Identities=20% Similarity=0.298 Sum_probs=97.4
Q ss_pred ccCccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCC-------CHHH
Q 008336 15 LSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDE-------DDEA 85 (569)
Q Consensus 15 ~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~-------~~~~ 85 (569)
.|.++|+| +.+.+|+.+++++++|| +||+|||+||++|+.++|.|.+++++|++++ +.|++|++|. +.+.
T Consensus 24 ~~~~~p~f~l~~~~G~~~~l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~-v~vv~vs~d~~~~~~~~~~~~ 102 (190)
T 2vup_A 24 AASSIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQG-FTVLAFPCNQFGGQEPGNEEE 102 (190)
T ss_dssp CCCSGGGSCCBBTTSSBCCGGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT-CEEEEEECCCSTTCCCSCHHH
T ss_pred CCCcccCeEEEcCCCCEEEHHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCC-eEEEEEEcCccCCCCCCCHHH
Confidence 47899999 56789999999999999 9999999999999999999999999998875 9999999984 7888
Q ss_pred HHHHH-HhCCCcccccCC--chhH--HHH-----HHhcCCCCcc------EEEEECCCCcEEEc
Q 008336 86 FKGYF-SKMPWLAVPFSD--SETR--DKL-----DELFKVMGIP------HLVILDENGKVLSD 133 (569)
Q Consensus 86 ~~~~~-~~~~~~~~~~~~--~~~~--~~l-----~~~~~v~~~P------~~~lid~~G~i~~~ 133 (569)
+++|+ ++++..+..+.+ .... ..+ ...|++.++| +++|||++|+|+..
T Consensus 103 ~~~~~~~~~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~ 166 (190)
T 2vup_A 103 IKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVER 166 (190)
T ss_dssp HHHHHHHHHCCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEE
T ss_pred HHHHHHHhcCCCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEE
Confidence 99999 787766555432 1110 112 1346899999 99999999999874
No 147
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.74 E-value=5e-18 Score=156.70 Aligned_cols=117 Identities=13% Similarity=0.141 Sum_probs=94.2
Q ss_pred cCCcccee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC-------ChhHH
Q 008336 336 SGDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR-------DQTSF 407 (569)
Q Consensus 336 ~~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~-------~~~~~ 407 (569)
...|+|.+ +.+|+++++++++||++||+||++||++|+.++|.|++++++++++ ++.|++|++|. +.+.+
T Consensus 27 ~~~p~f~l~~~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~--~v~vv~is~d~~~~~~~~~~~~~ 104 (185)
T 2gs3_A 27 RSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAEC--GLRILAFPCNQFGKQEPGSNEEI 104 (185)
T ss_dssp CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCTTTTCCCSCHHHH
T ss_pred CCcCCceeEcCCCCEeeHHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcC--CeEEEEEECcccCCCCCCCHHHH
Confidence 34589988 9999999999999999999999999999999999999999999876 69999999873 46778
Q ss_pred HHHHhcCCCcccccCc--hhhHH----HHHhc-------C-----CCCccEEEEECCCCcEEEccc
Q 008336 408 DEFFKGMPWLALPFGD--ARKAS----LSRKF-------K-----VSGIPMLVAIGPSGRTITKEA 455 (569)
Q Consensus 408 ~~~~~~~~~~~~~~~~--d~~~~----l~~~~-------~-----v~~~Pt~~lid~~G~i~~~~~ 455 (569)
++|+++++ +.+|+.. |..+. +.+.+ + ++.+|++||||++|+|+.+..
T Consensus 105 ~~~~~~~~-~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~ 169 (185)
T 2gs3_A 105 KEFAAGYN-VKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYG 169 (185)
T ss_dssp HHHHHHTT-CCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEEC
T ss_pred HHHHHHcC-CCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeC
Confidence 89998876 4566653 22221 22111 4 344799999999999999853
No 148
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.74 E-value=6e-18 Score=155.89 Aligned_cols=120 Identities=18% Similarity=0.178 Sum_probs=97.8
Q ss_pred ccccCccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCC-------CCH
Q 008336 13 SLLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD-------EDD 83 (569)
Q Consensus 13 ~~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d-------~~~ 83 (569)
-.+|.++|+| +.+.+|+.+++++++|| +||+||++||++|+.++|.|.+++++|++++ +.|++|++| ++.
T Consensus 21 ~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~-v~vv~vs~d~~~~~e~~~~ 99 (183)
T 2obi_A 21 WRCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECG-LRILAFPCNQFGKQEPGSN 99 (183)
T ss_dssp GGGCCSGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT-EEEEEEECCCSTTCCCSCH
T ss_pred CcccCcccceEEEcCCCCEeeHHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCC-eEEEEEECCCCCCCCCCCH
Confidence 3679999999 56789999999999999 9999999999999999999999999998875 999999987 367
Q ss_pred HHHHHHHHhCCCcccccC--Cchh--HHHHHHhc-------C-----CCCccEEEEECCCCcEEEc
Q 008336 84 EAFKGYFSKMPWLAVPFS--DSET--RDKLDELF-------K-----VMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~--~~~~--~~~l~~~~-------~-----v~~~P~~~lid~~G~i~~~ 133 (569)
+.+++|++++++.+..+. +... ...+.+.+ + +..+|+++|||++|+|+.+
T Consensus 100 ~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~ 165 (183)
T 2obi_A 100 EEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKR 165 (183)
T ss_dssp HHHHHHHHTTTCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEE
T ss_pred HHHHHHHHHcCCCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEE
Confidence 899999999887665554 2221 11122211 4 4557999999999999874
No 149
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.74 E-value=1.6e-17 Score=155.61 Aligned_cols=116 Identities=23% Similarity=0.243 Sum_probs=99.6
Q ss_pred cccCccCCce-ecC--CC--ceeecCCCCCc-EEEEEe-cCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHH
Q 008336 14 LLSSSARDFL-IRS--NG--DQVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAF 86 (569)
Q Consensus 14 ~~g~~~pdf~-~~~--~g--~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~ 86 (569)
.+|.++|+|. .+. +| +.+++++++|| +||+|| ++||++|+.++|.|.+++++|++.+ ++|++|++| +.+..
T Consensus 7 ~~G~~aP~f~l~~~~~~g~~~~v~l~~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~-v~vi~Is~D-~~~~~ 84 (202)
T 1uul_A 7 EDLHPAPDFNETALMPNGTFKKVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIG-CEVLACSMD-SEYSH 84 (202)
T ss_dssp CTTSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTT-EEEEEEESS-CHHHH
T ss_pred cCCCcCCCcEeeeeecCCCccEEEHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCC-CEEEEEeCC-CHHHH
Confidence 5799999994 454 78 89999999999 999999 9999999999999999999998765 999999998 56778
Q ss_pred HHHHHhC-------CCcccccCCchhHHHHHHhcCCC------CccEEEEECCCCcEEEc
Q 008336 87 KGYFSKM-------PWLAVPFSDSETRDKLDELFKVM------GIPHLVILDENGKVLSD 133 (569)
Q Consensus 87 ~~~~~~~-------~~~~~~~~~~~~~~~l~~~~~v~------~~P~~~lid~~G~i~~~ 133 (569)
++|++++ +..+..+.+.. ..+.+.|++. ++|+++|||++|+|+..
T Consensus 85 ~~~~~~~~~~~~~~~~~~p~l~D~~--~~~~~~ygv~~~~~g~~~P~~~lid~~G~i~~~ 142 (202)
T 1uul_A 85 LAWTSIERKRGGLGQMNIPILADKT--KCIMKSYGVLKEEDGVAYRGLFIIDPKQNLRQI 142 (202)
T ss_dssp HHHHHSCGGGTCCCSCSSCEEECTT--CHHHHHHTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred HHHHHHHHhhCCCCCCceeEEECCc--hHHHHHcCCccCCCCceeeEEEEECCCCEEEEE
Confidence 8898877 44444444433 4789999999 99999999999999875
No 150
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.74 E-value=8.4e-19 Score=162.24 Aligned_cols=118 Identities=20% Similarity=0.291 Sum_probs=95.5
Q ss_pred ccCccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCC-------CCHHH
Q 008336 15 LSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD-------EDDEA 85 (569)
Q Consensus 15 ~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d-------~~~~~ 85 (569)
.+.++|+| +.+.+|+.+++++++|| +||+|||+||++|+.++|.|.+++++|++++ ++|++|++| ++.+.
T Consensus 22 ~~~~~p~f~l~d~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~-~~vi~is~d~~~~~e~~~~~~ 100 (187)
T 3dwv_A 22 AASSIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQG-FTVLAFPSNQFGGQEPGNEEE 100 (187)
T ss_dssp TCCSGGGSCCBBTTSCBCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGT-CEEEEEEBCCCSSCSSSBTTH
T ss_pred CCCccCCeEEEcCCCCEeeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCC-eEEEEEECcccCCCCCCCHHH
Confidence 37889999 66789999999999999 9999999999999999999999999999875 999999998 46788
Q ss_pred HHHHHHhC-CCcccccCC--chh--HHHHH--------HhcCCCCcc---EEEEECCCCcEEEc
Q 008336 86 FKGYFSKM-PWLAVPFSD--SET--RDKLD--------ELFKVMGIP---HLVILDENGKVLSD 133 (569)
Q Consensus 86 ~~~~~~~~-~~~~~~~~~--~~~--~~~l~--------~~~~v~~~P---~~~lid~~G~i~~~ 133 (569)
+++|+++. +..+..+.+ ... ...+. ..+++..+| +++|||++|+|+..
T Consensus 101 ~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~ 164 (187)
T 3dwv_A 101 IKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVER 164 (187)
T ss_dssp HHHSCCBCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEE
T ss_pred HHHHHHhccCCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEE
Confidence 89998844 665554432 111 11121 345677788 99999999999875
No 151
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.74 E-value=4.5e-18 Score=154.95 Aligned_cols=133 Identities=15% Similarity=0.143 Sum_probs=108.3
Q ss_pred CCcccee-cCCCCceecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcC
Q 008336 337 GDLDFVV-GKNGGKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGM 414 (569)
Q Consensus 337 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~ 414 (569)
..|+|.+ +.+|+.+++++++||++||+|| ++||++|+.++|.|+++++++ . +++||+|++|. ++..++|.+++
T Consensus 26 ~~P~f~l~~~~G~~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~---~v~vv~Is~d~-~~~~~~~~~~~ 100 (171)
T 2yzh_A 26 RAPEAVVVTKDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM-E---GVDVTVVSMDL-PFAQKRFCESF 100 (171)
T ss_dssp BCCCEEEEETTSCEEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T---TEEEEEEESSC-HHHHHHHHHHT
T ss_pred cCCceEEECCCCCEeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-C---CceEEEEeCCC-HHHHHHHHHHc
Confidence 3589988 9999999999999999999999 899999999999999999988 3 59999999984 57788999988
Q ss_pred CCcccccCch-hhHHHHHhcCCCC---------ccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhh
Q 008336 415 PWLALPFGDA-RKASLSRKFKVSG---------IPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEM 484 (569)
Q Consensus 415 ~~~~~~~~~d-~~~~l~~~~~v~~---------~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l 484 (569)
+.-.+|++.| ....+ +.|++.. +|+++|||++|+|+++..+.. +....+.+++.+.|+++
T Consensus 101 ~~~~~~~l~D~~~~~~-~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~~~~---------~~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 101 NIQNVTVASDFRYRDM-EKYGVLIGEGALKGILARAVFIIDKEGKVAYVQLVPE---------ITEEPNYDEVVNKVKEL 170 (171)
T ss_dssp TCCSSEEEECTTTCGG-GGGTCBBCSSTTTTSBCCEEEEECTTSBEEEEEECSB---------TTSCCCCHHHHHHHHHC
T ss_pred CCCCeEEeecCccCcH-HHhCCEecccccCCceeeEEEEEcCCCeEEEEEeCCC---------cCCCCCHHHHHHHHHhh
Confidence 7337888888 77788 9999862 699999999999999853211 11223345666666654
No 152
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.74 E-value=8e-18 Score=154.64 Aligned_cols=118 Identities=15% Similarity=0.201 Sum_probs=93.9
Q ss_pred ccCCcccee-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC-------ChhH
Q 008336 335 VSGDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR-------DQTS 406 (569)
Q Consensus 335 ~~~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~-------~~~~ 406 (569)
....|+|.+ +.+|+.+++++++||++||+||++||++|+.++|.|++++++++++ ++.|++|++|. +.+.
T Consensus 15 ~~~~p~f~l~d~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~--~~~vi~is~d~~~~~~~d~~~~ 92 (180)
T 3kij_A 15 INSFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPS--HFSVLAFPCNQFGESEPRPSKE 92 (180)
T ss_dssp CCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTT--SEEEEEEECCCSTTCCCSCHHH
T ss_pred cCcccceEEecCCCCEecHHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccC--CeEEEEEECCccccCCCCCHHH
Confidence 344589988 9999999999999999999999999999999999999999999875 69999999875 7788
Q ss_pred HHHHHhc-CCCcccccCc-----hhhH-HHHHhc--CCCCccE----EEEECCCCcEEEccc
Q 008336 407 FDEFFKG-MPWLALPFGD-----ARKA-SLSRKF--KVSGIPM----LVAIGPSGRTITKEA 455 (569)
Q Consensus 407 ~~~~~~~-~~~~~~~~~~-----d~~~-~l~~~~--~v~~~Pt----~~lid~~G~i~~~~~ 455 (569)
+++|+++ ++ +.+|+.. +... .+...+ .+.++|+ +||||++|+|+.+..
T Consensus 93 ~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~~ 153 (180)
T 3kij_A 93 VESFARKNYG-VTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWR 153 (180)
T ss_dssp HHHHHHHHHC-CCSCBBCCCCCSSTTCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEEC
T ss_pred HHHHHHHhcC-CCCceeeeeeccCccccHHHHHHHhcCCCCccccceEEEECCCCCEEEEEC
Confidence 9999988 65 5555532 1111 111111 1346888 999999999999853
No 153
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.74 E-value=1.4e-17 Score=151.37 Aligned_cols=139 Identities=17% Similarity=0.217 Sum_probs=102.7
Q ss_pred ccCCcccee-cCCCCceecccCCCCEEEEEEecCCCh-hHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC---CChhHHHH
Q 008336 335 VSGDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCP-PCRAFLPKLIDAYKKIKERNESLEVVFISSD---RDQTSFDE 409 (569)
Q Consensus 335 ~~~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~-~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d---~~~~~~~~ 409 (569)
..+.|+|.+ |.+|+++++++++||+|||+||++||+ +|...++.|.++++.+++...++.+|+||+| ++++.+++
T Consensus 9 ~~~~PdF~L~d~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~l~~ 88 (170)
T 4hde_A 9 NWDLETFQFTNQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPENLKA 88 (170)
T ss_dssp CBCCCCCEEECTTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHH
T ss_pred CCcCCCcEEECCCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHHHHHH
Confidence 345699988 999999999999999999999999997 7999999999999999876667999999998 46788999
Q ss_pred HHhcCCC--cccccCch-----hhHHHHHhcC----------CCCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHH
Q 008336 410 FFKGMPW--LALPFGDA-----RKASLSRKFK----------VSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEE 472 (569)
Q Consensus 410 ~~~~~~~--~~~~~~~d-----~~~~l~~~~~----------v~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~ 472 (569)
|++.++. ..+.++.+ ........|+ +...|++||||++|+|+.... | ....
T Consensus 89 y~~~~~~~~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~-------g-----~~~~ 156 (170)
T 4hde_A 89 FIQKFTEDTSNWNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYS-------G-----ISNT 156 (170)
T ss_dssp HHTTTCSCCTTEEEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEE-------S-----SSSC
T ss_pred HHHHcCCCCCCceecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEEC-------C-----CCCC
Confidence 9987641 22222211 1111222233 345689999999999997632 1 1122
Q ss_pred HHHHHHHHhhhhh
Q 008336 473 RMKEIDGQYNEMA 485 (569)
Q Consensus 473 ~~~~l~~~l~~l~ 485 (569)
..++|.+.|+.|+
T Consensus 157 ~~~~l~~~ik~Ll 169 (170)
T 4hde_A 157 PYEDIIRDMKRLA 169 (170)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHh
Confidence 3466777777765
No 154
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.74 E-value=1.3e-17 Score=150.63 Aligned_cols=116 Identities=21% Similarity=0.177 Sum_probs=98.7
Q ss_pred ccccCccCCc-eecCCCceeecCCCCCc-EEEEEec-CCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHH
Q 008336 13 SLLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSA-SWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGY 89 (569)
Q Consensus 13 ~~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a-~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~ 89 (569)
-.+|.++|+| +.+.+|+.+++++++|| ++|+||+ +||++|+.++|.|+++++++ . +++|++|+.| +.+..++|
T Consensus 16 ~~~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~-~v~vv~is~d-~~~~~~~~ 91 (163)
T 1psq_A 16 LQVGDKALDFSLTTTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--D-NTVVLTVSMD-LPFAQKRW 91 (163)
T ss_dssp CCTTSBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--T-TEEEEEEESS-CHHHHHHH
T ss_pred CCCCCCCCCEEEEcCCCcEeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--C-CcEEEEEECC-CHHHHHHH
Confidence 3579999999 56789999999999999 9999995 99999999999999999998 4 4999999998 56778999
Q ss_pred HHhCCC-cccccCCchhHHHHHHhcCCC----C--ccEEEEECCCCcEEEc
Q 008336 90 FSKMPW-LAVPFSDSETRDKLDELFKVM----G--IPHLVILDENGKVLSD 133 (569)
Q Consensus 90 ~~~~~~-~~~~~~~~~~~~~l~~~~~v~----~--~P~~~lid~~G~i~~~ 133 (569)
++++++ .+..+.|. ....+.+.|++. + .|+++|||++|+|+..
T Consensus 92 ~~~~~~~~~~~l~D~-~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~ 141 (163)
T 1psq_A 92 CGAEGLDNAIMLSDY-FDHSFGRDYALLINEWHLLARAVFVLDTDNTIRYV 141 (163)
T ss_dssp HHHHTCTTSEEEECT-TTCHHHHHHTCBCTTTCSBCCEEEEECTTCBEEEE
T ss_pred HHhcCCCCcEEecCC-chhHHHHHhCCccccCCceEEEEEEEcCCCeEEEE
Confidence 998887 55545551 224688999987 3 3999999999999875
No 155
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.74 E-value=1.7e-17 Score=157.70 Aligned_cols=116 Identities=18% Similarity=0.255 Sum_probs=98.2
Q ss_pred cccCccCCce-ecC---CCceeecCCCCCc-EEEEEec-CCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHH
Q 008336 14 LLSSSARDFL-IRS---NGDQVKLDSLKGK-IGLYFSA-SWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFK 87 (569)
Q Consensus 14 ~~g~~~pdf~-~~~---~g~~v~l~~~~gk-vlv~F~a-~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~ 87 (569)
.+|.++|+|. .++ +|+.+++++++|| +||+||+ +||++|+.++|.|++++++|++++ +.||+|++|. .+...
T Consensus 41 ~~G~~aP~f~l~~~~d~~G~~v~l~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~-v~vv~Is~D~-~~~~~ 118 (222)
T 3ztl_A 41 LPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRN-CQVIACSTDS-QYSHL 118 (222)
T ss_dssp CSSEECCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTT-EEEEEEESSC-HHHHH
T ss_pred cCCCCCCCeEEecccCCCCcEEeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCC-CEEEEEECCC-HHHHH
Confidence 5799999994 433 5599999999999 9999997 999999999999999999999775 9999999984 56677
Q ss_pred HHHHhC-------CCcccccCCchhHHHHHHhcCCC------CccEEEEECCCCcEEEc
Q 008336 88 GYFSKM-------PWLAVPFSDSETRDKLDELFKVM------GIPHLVILDENGKVLSD 133 (569)
Q Consensus 88 ~~~~~~-------~~~~~~~~~~~~~~~l~~~~~v~------~~P~~~lid~~G~i~~~ 133 (569)
+|++.. +..+..+.|.+ ..+.+.|++. .+|+++|||++|+|+..
T Consensus 119 ~~~~~~~~~~~~~~~~~~~l~D~~--~~~~~~ygv~~~~~g~~~P~~~lID~~G~I~~~ 175 (222)
T 3ztl_A 119 AWDNLDRKSGGLGHMKIPLLADRK--QEISKAYGVFDEEDGNAFRGLFIIDPNGILRQI 175 (222)
T ss_dssp HHHHSCGGGTSCCSCSSCEEECSS--SHHHHHTTCBCTTTSSBCEEEEEECTTSEEEEE
T ss_pred HHHHHhhhhccccccceeEEeCCc--hHHHHHcCCeecCCCCccceEEEECCCCeEEEE
Confidence 887765 55555555544 4789999998 89999999999999875
No 156
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.74 E-value=1.8e-17 Score=154.64 Aligned_cols=116 Identities=23% Similarity=0.313 Sum_probs=98.9
Q ss_pred cccCccCCc-eecC-CC--ceeecCCCCCc-EEEEEe-cCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHH
Q 008336 14 LLSSSARDF-LIRS-NG--DQVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFK 87 (569)
Q Consensus 14 ~~g~~~pdf-~~~~-~g--~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~ 87 (569)
.+|.++|+| +.+. +| +.+++++++|| +||+|| ++||++|+.++|.|.+++++|++.+ +.|++|++|. .+...
T Consensus 6 ~~G~~aP~f~l~~~~~g~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~-v~vv~Is~d~-~~~~~ 83 (197)
T 1qmv_A 6 RIGKPAPDFKATAVVDGAFKEVKLSDYKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLG-CEVLGVSVDS-QFTHL 83 (197)
T ss_dssp CTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTT-EEEEEEESSC-HHHHH
T ss_pred cCCCCCCCeEeEeecCCCccEEEHHHHCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC-CEEEEEECCC-HHHHH
Confidence 579999999 4455 78 99999999999 999999 9999999999999999999998774 9999999985 56778
Q ss_pred HHHHhC-------CCcccccCCchhHHHHHHhcCCC------CccEEEEECCCCcEEEc
Q 008336 88 GYFSKM-------PWLAVPFSDSETRDKLDELFKVM------GIPHLVILDENGKVLSD 133 (569)
Q Consensus 88 ~~~~~~-------~~~~~~~~~~~~~~~l~~~~~v~------~~P~~~lid~~G~i~~~ 133 (569)
+|++++ ++.+..+.|.. ..+.+.|++. ++|+++|||++|+|+..
T Consensus 84 ~~~~~~~~~~~~~~~~~p~l~D~~--~~~~~~~gv~~~~~~~~~P~~~lid~~G~i~~~ 140 (197)
T 1qmv_A 84 AWINTPRKEGGLGPLNIPLLADVT--RRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQI 140 (197)
T ss_dssp HHHTSCGGGTCCCSCSSCEEECTT--CHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred HHHHHHHhhCCCCCCceEEEECCc--HHHHHHcCCccCCCCceeeEEEEECCCCcEEEE
Confidence 888876 44444444433 4688999998 89999999999999875
No 157
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.74 E-value=8.3e-18 Score=159.55 Aligned_cols=138 Identities=17% Similarity=0.204 Sum_probs=112.8
Q ss_pred cCCcccee----cCCCCceecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHH
Q 008336 336 SGDLDFVV----GKNGGKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEF 410 (569)
Q Consensus 336 ~~~~~f~~----~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~ 410 (569)
...|+|.+ +.+|+.+++++++||++||+|| ++||++|+.++|.|.+++++|+++ +++||+|++|. .+..++|
T Consensus 31 ~~aP~f~l~~~~~~~g~~v~l~d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~--~v~vv~Is~D~-~~~~~~~ 107 (220)
T 1zye_A 31 QHAPYFKGTAVVSGEFKEISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDV--NCEVVAVSVDS-HFSHLAW 107 (220)
T ss_dssp SBCCCCEEEEECSSSEEEEEGGGGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHT--TEEEEEEESSC-HHHHHHH
T ss_pred CCCCCcEEEeeeCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEECCC-HHHHHHH
Confidence 34688876 3578999999999999999999 999999999999999999999875 69999999994 4677888
Q ss_pred HhcC----C--CcccccCchhhHHHHHhcCCC------CccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHH
Q 008336 411 FKGM----P--WLALPFGDARKASLSRKFKVS------GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEID 478 (569)
Q Consensus 411 ~~~~----~--~~~~~~~~d~~~~l~~~~~v~------~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~ 478 (569)
++.+ + .+.+|++.|....+++.|++. ++|++||||++|+|+++..+.. -.....+++.
T Consensus 108 ~~~~~~~~g~~~~~fp~l~D~~~~i~~~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~----------~~~~~~~ell 177 (220)
T 1zye_A 108 INTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDL----------PVGRSVEETL 177 (220)
T ss_dssp HTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECT----------TCCCCHHHHH
T ss_pred HHHHHHhCCCcCCceEEEECCcHHHHHHhCCeecCCCcccceEEEECCCCEEEEEEecCC----------CCCCCHHHHH
Confidence 8766 2 367888888888999999999 9999999999999999853221 0123456666
Q ss_pred HHhhhhhc
Q 008336 479 GQYNEMAK 486 (569)
Q Consensus 479 ~~l~~l~~ 486 (569)
+.|+++..
T Consensus 178 ~~l~~l~~ 185 (220)
T 1zye_A 178 RLVKAFQF 185 (220)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhh
Confidence 66766653
No 158
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.74 E-value=9.2e-17 Score=153.56 Aligned_cols=173 Identities=13% Similarity=0.095 Sum_probs=112.9
Q ss_pred CCCc-EEEEE----ecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHH
Q 008336 36 LKGK-IGLYF----SASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLD 110 (569)
Q Consensus 36 ~~gk-vlv~F----~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 110 (569)
..+. +++.| |++||++|+.++|.+.++++++.+.+++.++.|+++.+. .++
T Consensus 19 ~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~------------------------~l~ 74 (229)
T 2ywm_A 19 FKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHK------------------------EET 74 (229)
T ss_dssp CCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCH------------------------HHH
T ss_pred ccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccH------------------------HHH
Confidence 3455 55555 599999999999999999988854446999999988764 599
Q ss_pred HhcCCCCccEEEEECCCCc-EEEcCCcceeecccCCCCCccHHHHHHHHHHHHHHHhhcccccccccCCCceeecCCCce
Q 008336 111 ELFKVMGIPHLVILDENGK-VLSDGGVEIIREYGVEGYPFTVERIKEMKEQEERAKREQSLRSVLTSHSRDFVISSDGRK 189 (569)
Q Consensus 111 ~~~~v~~~P~~~lid~~G~-i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~ 189 (569)
+.|+|+++||+++++ +|. .....|. .+...+..++........ . ....+.+.
T Consensus 75 ~~~~v~~~Ptl~~~~-~~~~~~~~~G~------------~~~~~l~~~~~~~~~~~~--~------------~~~l~~~~ 127 (229)
T 2ywm_A 75 EKYGVDRVPTIVIEG-DKDYGIRYIGL------------PAGLEFTTLINGIFHVSQ--R------------KPQLSEKT 127 (229)
T ss_dssp HHTTCCBSSEEEEES-SSCCCEEEESC------------CCTTHHHHHHHHHHHHHT--T------------CCSCCHHH
T ss_pred HHcCCCcCcEEEEEC-CCcccceecCC------------ccHHHHHHHHHHHHhccC--C------------ccCCCHHH
Confidence 999999999999995 332 2222221 122333333322111000 0 00111111
Q ss_pred eee-ccccCcEEEEEEecCCcccchhhhHHHHHHHHHHhcCCCceEEEEeeccccHHHHHHHhcCCCcccccCCchhHHH
Q 008336 190 ISV-SDLEGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREK 268 (569)
Q Consensus 190 ~~~-~~~~gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ei~~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~ 268 (569)
+.. ....++.+++.|+++||++|+.+.|.+.+++..+. .+.++.++++. ...
T Consensus 128 ~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~----~v~~~~vd~~~-----------------------~~~ 180 (229)
T 2ywm_A 128 LELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAND----YITSKVIDASE-----------------------NQD 180 (229)
T ss_dssp HHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT----TEEEEEEEGGG-----------------------CHH
T ss_pred HHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHCC----CeEEEEEECCC-----------------------CHH
Confidence 111 11244566888999999999999999999888762 34444444433 357
Q ss_pred HHhhcccCCCceEEEECCCCC
Q 008336 269 LARYFELSTLPTLVIIGPDGK 289 (569)
Q Consensus 269 l~~~f~v~~~Ptlvi~~~~g~ 289 (569)
+++.|+|.++||+++ +|+
T Consensus 181 l~~~~~v~~~Pt~~~---~G~ 198 (229)
T 2ywm_A 181 LAEQFQVVGVPKIVI---NKG 198 (229)
T ss_dssp HHHHTTCCSSSEEEE---GGG
T ss_pred HHHHcCCcccCEEEE---CCE
Confidence 889999999999998 555
No 159
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.74 E-value=2.1e-17 Score=154.53 Aligned_cols=117 Identities=21% Similarity=0.373 Sum_probs=97.5
Q ss_pred cccee-cCCCCceecccCCCCEEEEEEecCCChh-HHhhhHHHHHHHHHHhhc-CCCeEEEEEeCCC---ChhHHHHHHh
Q 008336 339 LDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPP-CRAFLPKLIDAYKKIKER-NESLEVVFISSDR---DQTSFDEFFK 412 (569)
Q Consensus 339 ~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~-C~~~~~~l~~l~~~~~~~-~~~~~vv~is~d~---~~~~~~~~~~ 412 (569)
|+|.+ +.+|+.+++++++||++||+||++||++ |+.++|.|.+++++++++ ..++.|++|++|. +++.+++|++
T Consensus 22 p~f~l~d~~G~~v~l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~ 101 (200)
T 2b7k_A 22 GPFHLEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLS 101 (200)
T ss_dssp CCCEEEETTSCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHT
T ss_pred CCEEEEcCCCCEEeHHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHH
Confidence 89988 9999999999999999999999999998 999999999999999854 3469999999994 6788999998
Q ss_pred cCC--CcccccCchhhHHHHHhcCCC-Ccc---------------EEEEECCCCcEEEccc
Q 008336 413 GMP--WLALPFGDARKASLSRKFKVS-GIP---------------MLVAIGPSGRTITKEA 455 (569)
Q Consensus 413 ~~~--~~~~~~~~d~~~~l~~~~~v~-~~P---------------t~~lid~~G~i~~~~~ 455 (569)
+++ |..++...+....+++.|+|. +.| ++||||++|+|+....
T Consensus 102 ~~~~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~ 162 (200)
T 2b7k_A 102 DFHPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALG 162 (200)
T ss_dssp TSCTTCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEEEC
T ss_pred HcCCCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeC
Confidence 875 444444456677899999987 444 8899999999998743
No 160
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.74 E-value=1.4e-17 Score=151.41 Aligned_cols=140 Identities=14% Similarity=0.125 Sum_probs=109.1
Q ss_pred CCc-ccee-cCCCCceecccCCCCEEEEEEecCCCh-hHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC--CChhHHHHHH
Q 008336 337 GDL-DFVV-GKNGGKVPVSDLAGKTILLYFSAHWCP-PCRAFLPKLIDAYKKIKERNESLEVVFISSD--RDQTSFDEFF 411 (569)
Q Consensus 337 ~~~-~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~-~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d--~~~~~~~~~~ 411 (569)
..| +|.+ +.+|+++++++++||++||+||++||+ +|..+++.|++++++++....+++||+|++| ++++.+++|+
T Consensus 6 ~~P~~f~l~d~~G~~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~ 85 (170)
T 3me7_A 6 YVPGDITLVDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQ 85 (170)
T ss_dssp BCCTTCEEEETTCCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHH
T ss_pred cCCCCeEEEcCCcCEEchHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHH
Confidence 458 9988 999999999999999999999999998 6999999999999999754457999999998 4678899999
Q ss_pred hcCCC--ccccc----CchhhHHHHHhcCC---------CCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHH
Q 008336 412 KGMPW--LALPF----GDARKASLSRKFKV---------SGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKE 476 (569)
Q Consensus 412 ~~~~~--~~~~~----~~d~~~~l~~~~~v---------~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~ 476 (569)
++++. ..+++ ..+....+++.||+ ...|++||||++|+|+... +|. ....++
T Consensus 86 ~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~-------~g~------~~~~~~ 152 (170)
T 3me7_A 86 KEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYI-------YGV------NYNYLE 152 (170)
T ss_dssp HHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEE-------ESS------SCCHHH
T ss_pred HHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEEE-------eCC------CCCHHH
Confidence 88762 12211 22456788888774 4568999999999999873 231 112466
Q ss_pred HHHHhhhhhcCCC
Q 008336 477 IDGQYNEMAKGWP 489 (569)
Q Consensus 477 l~~~l~~l~~~~~ 489 (569)
+.+.|++++...+
T Consensus 153 i~~~l~~~~~~~~ 165 (170)
T 3me7_A 153 FVNALRLARGEGH 165 (170)
T ss_dssp HHHHHHHHTTCSC
T ss_pred HHHHHHHhhcccc
Confidence 7777777765443
No 161
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.74 E-value=3.6e-17 Score=148.72 Aligned_cols=116 Identities=19% Similarity=0.348 Sum_probs=99.1
Q ss_pred cc-CCc-eecCCCceeecCCCCCc-EEEEEecCCCHh-hHhhHHHHHHHHHHhcCC---CCEEEEEEeCC---CCHHHHH
Q 008336 18 SA-RDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGP-CQRFTPILAEVYNELSRQ---GDFEVIFVSGD---EDDEAFK 87 (569)
Q Consensus 18 ~~-pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~-C~~~~p~l~~~~~~~~~~---g~~~vv~v~~d---~~~~~~~ 87 (569)
.. |+| +.+.+|+.+++++++|| +||+||++||++ |+.++|.|+++++++++. .++.|++|++| ++.+.++
T Consensus 4 ~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~ 83 (171)
T 2rli_A 4 TGQGDFHLLDHRGRARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMA 83 (171)
T ss_dssp CCCSCCEEEETTSCEEETTTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHH
T ss_pred CCCCCeEEEeCCCCEEeHHHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHH
Confidence 45 899 56789999999999999 999999999998 999999999999999742 25999999998 3688999
Q ss_pred HHHHhCCCcccccCCc-hhHHHHHHhcCCCCcc---------------EEEEECCCCcEEEc
Q 008336 88 GYFSKMPWLAVPFSDS-ETRDKLDELFKVMGIP---------------HLVILDENGKVLSD 133 (569)
Q Consensus 88 ~~~~~~~~~~~~~~~~-~~~~~l~~~~~v~~~P---------------~~~lid~~G~i~~~ 133 (569)
+|+++++..+..+.+. +....+.+.|++..+| +++|||++|+|+..
T Consensus 84 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~ 145 (171)
T 2rli_A 84 RYVQDFHPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDY 145 (171)
T ss_dssp HHHHTTCTTCCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEE
T ss_pred HHHHHcCCCeEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEE
Confidence 9999998766555443 3345788999999888 99999999999874
No 162
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.74 E-value=7.4e-18 Score=152.00 Aligned_cols=115 Identities=17% Similarity=0.303 Sum_probs=102.0
Q ss_pred CCcccee---cCCC--Cceeccc-CCCCEEEEEEe-cCCChhHH-hhhHHHHHHHHHHhhcCCCeE-EEEEeCCCChhHH
Q 008336 337 GDLDFVV---GKNG--GKVPVSD-LAGKTILLYFS-AHWCPPCR-AFLPKLIDAYKKIKERNESLE-VVFISSDRDQTSF 407 (569)
Q Consensus 337 ~~~~f~~---~~~g--~~v~l~~-~~gk~vll~F~-a~wC~~C~-~~~~~l~~l~~~~~~~~~~~~-vv~is~d~~~~~~ 407 (569)
..|+|.+ +.+| +++++++ ++||++||+|| ++||++|+ .++|.|++++++++++ ++. |++||.| +++..
T Consensus 9 ~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~--~v~~vv~Is~d-~~~~~ 85 (162)
T 1tp9_A 9 VLPDGKLAYFDEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSK--GVTEILCISVN-DPFVM 85 (162)
T ss_dssp BCCCCEEEEECTTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHT--TCCCEEEEESS-CHHHH
T ss_pred CCCCeEEEeecCCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC--CCCEEEEEECC-CHHHH
Confidence 4588875 7899 9999999 89999999999 89999999 9999999999999875 699 9999998 56788
Q ss_pred HHHHhcCCCc-ccccCchhhHHHHHhcCCC------C-----ccEEEEECCCCcEEEccc
Q 008336 408 DEFFKGMPWL-ALPFGDARKASLSRKFKVS------G-----IPMLVAIGPSGRTITKEA 455 (569)
Q Consensus 408 ~~~~~~~~~~-~~~~~~d~~~~l~~~~~v~------~-----~Pt~~lid~~G~i~~~~~ 455 (569)
++|.++++.- .+|++.|.+..+++.||+. + +|++|||| +|+|++...
T Consensus 86 ~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~~~vid-~G~i~~~~~ 144 (162)
T 1tp9_A 86 KAWAKSYPENKHVKFLADGSATYTHALGLELDLQEKGLGTRSRRFALLVD-DLKVKAANI 144 (162)
T ss_dssp HHHHHTCTTCSSEEEEECTTSHHHHHTTCEEEETTTTSEEEECCEEEEEE-TTEEEEEEE
T ss_pred HHHHHhcCCCCCeEEEECCCchHHHHcCcccccccCCCCccceeEEEEEE-CCEEEEEEe
Confidence 9999988733 6899999999999999987 3 89999999 999999853
No 163
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.74 E-value=1.8e-17 Score=149.60 Aligned_cols=116 Identities=21% Similarity=0.379 Sum_probs=99.7
Q ss_pred ccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHh-hHhhHHHHHHHHHHhcCC---CCEEEEEEeCCC---CHHHHHH
Q 008336 18 SARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGP-CQRFTPILAEVYNELSRQ---GDFEVIFVSGDE---DDEAFKG 88 (569)
Q Consensus 18 ~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~-C~~~~p~l~~~~~~~~~~---g~~~vv~v~~d~---~~~~~~~ 88 (569)
.+|+| +.+.+|+.+++++++|| +||+||++||++ |+.++|.|+++++++++. .++.+++|++|. +.+.+++
T Consensus 2 ~ap~f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~ 81 (164)
T 2ggt_A 2 LGGPFSLTTHTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIAN 81 (164)
T ss_dssp CCCCCEEEETTSCEEEGGGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHH
T ss_pred CCCCeEEEeCCCCEEeHHHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHH
Confidence 58999 56789999999999999 999999999997 999999999999999762 259999999985 4788999
Q ss_pred HHHhCCCcccccCC-chhHHHHHHhcCCCCcc---------------EEEEECCCCcEEEc
Q 008336 89 YFSKMPWLAVPFSD-SETRDKLDELFKVMGIP---------------HLVILDENGKVLSD 133 (569)
Q Consensus 89 ~~~~~~~~~~~~~~-~~~~~~l~~~~~v~~~P---------------~~~lid~~G~i~~~ 133 (569)
|+++++..+..+.. .+....+.+.|++.++| +++|||++|+++..
T Consensus 82 ~~~~~~~~~~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~ 142 (164)
T 2ggt_A 82 YVKEFSPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDY 142 (164)
T ss_dssp HHHTTCSSCEEEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEE
T ss_pred HHHHcCCCeEEEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEE
Confidence 99998866554432 34445789999999999 89999999999874
No 164
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.73 E-value=1.4e-17 Score=151.27 Aligned_cols=124 Identities=22% Similarity=0.335 Sum_probs=96.3
Q ss_pred cccccccCccCCc-eecCCCceeecCCCCCc-EEEEEecCCCH-hhHhhHHHHHHHHHHhcCCC-CEEEEEEeCC---CC
Q 008336 10 DIQSLLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCG-PCQRFTPILAEVYNELSRQG-DFEVIFVSGD---ED 82 (569)
Q Consensus 10 ~~~~~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~-~C~~~~p~l~~~~~~~~~~g-~~~vv~v~~d---~~ 82 (569)
.+..-+|.++|+| +.+.+|+++++++++|| +||+||++||+ +|...++.|.++++.+++.+ ++.+|+|++| ++
T Consensus 3 a~~~P~~~~~PdF~L~d~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dt 82 (170)
T 4hde_A 3 ALRKPLNWDLETFQFTNQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDK 82 (170)
T ss_dssp CCCSCCCBCCCCCEEECTTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCC
T ss_pred ccccCCCCcCCCcEEECCCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCccccc
Confidence 4455689999999 66889999999999999 99999999997 89999999999999997665 7999999998 46
Q ss_pred HHHHHHHHHhCCCcccc---cCC--chhHHH-HHHhcC----------CCCccEEEEECCCCcEEEc
Q 008336 83 DEAFKGYFSKMPWLAVP---FSD--SETRDK-LDELFK----------VMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 83 ~~~~~~~~~~~~~~~~~---~~~--~~~~~~-l~~~~~----------v~~~P~~~lid~~G~i~~~ 133 (569)
++.+++|+++++..... +.. ...... ....|+ +...|+++|||++|+|+..
T Consensus 83 p~~l~~y~~~~~~~~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~ 149 (170)
T 4hde_A 83 PENLKAFIQKFTEDTSNWNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKK 149 (170)
T ss_dssp HHHHHHHHTTTCSCCTTEEEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEE
T ss_pred HHHHHHHHHHcCCCCCCceecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEE
Confidence 78899999987643322 222 111111 222333 3446899999999999863
No 165
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.73 E-value=3.8e-18 Score=154.43 Aligned_cols=114 Identities=15% Similarity=0.129 Sum_probs=100.0
Q ss_pred CCcccee-cCCCCceecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcC
Q 008336 337 GDLDFVV-GKNGGKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGM 414 (569)
Q Consensus 337 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~ 414 (569)
..|+|.+ +.+|+.+++++++||++||+|| ++||++|+.++|.|+++++++ . +++|++|+.| +++.+++|++++
T Consensus 22 ~~P~f~l~~~~G~~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~---~v~vv~Is~d-~~~~~~~~~~~~ 96 (165)
T 1q98_A 22 IVENFILVGNDLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-S---NTIVLCISAD-LPFAQARFCGAE 96 (165)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-T---TEEEEEEESS-CHHHHTTCTTTT
T ss_pred CCCCeEEECCCCCEEehHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-C---CCEEEEEeCC-CHHHHHHHHHHc
Confidence 4589988 9999999999999999999999 899999999999999999998 3 5999999997 456778888887
Q ss_pred CCcccccCchh-hHHHHHhcCCCC---------ccEEEEECCCCcEEEccc
Q 008336 415 PWLALPFGDAR-KASLSRKFKVSG---------IPMLVAIGPSGRTITKEA 455 (569)
Q Consensus 415 ~~~~~~~~~d~-~~~l~~~~~v~~---------~Pt~~lid~~G~i~~~~~ 455 (569)
+.-.+|++.|. ...+++.|++.. +|++||||++|+|+++..
T Consensus 97 ~~~~~~~l~D~~~~~~~~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~ 147 (165)
T 1q98_A 97 GIENAKTVSTFRNHALHSQLGVDIQTGPLAGLTSRAVIVLDEQNNVLHSQL 147 (165)
T ss_dssp TCTTEEEEECTTCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEE
T ss_pred CCCceEEeeccccchHHHHhCceecccccCCccceeEEEEcCCCEEEEEEe
Confidence 73268888886 788999999863 599999999999999864
No 166
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.73 E-value=1e-17 Score=160.79 Aligned_cols=118 Identities=16% Similarity=0.175 Sum_probs=102.6
Q ss_pred ccCCcccee----cCCCCceecccCCCCEEEEEEec-CCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHH
Q 008336 335 VSGDLDFVV----GKNGGKVPVSDLAGKTILLYFSA-HWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDE 409 (569)
Q Consensus 335 ~~~~~~f~~----~~~g~~v~l~~~~gk~vll~F~a-~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~ 409 (569)
....|+|.+ +.+|++++|++++||++||+||+ +||++|+.++|.|.+++++|+++ ++.||+|++|. ....++
T Consensus 51 G~~aPdF~l~~~~d~~G~~vsLsd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~--gv~vv~Is~D~-~~~~~~ 127 (240)
T 3qpm_A 51 SKPAPQWEGTAVINGEFKELKLSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAI--NTEVVACSVDS-QFTHLA 127 (240)
T ss_dssp TSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTT--TEEEEEEESSC-HHHHHH
T ss_pred CCCCCCcEeeeeeCCCCcEEEHHHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHC--CCEEEEEECCC-HHHHHH
Confidence 345689985 44567999999999999999998 99999999999999999999875 79999999985 467778
Q ss_pred HHhcC------CCcccccCchhhHHHHHhcCCC------CccEEEEECCCCcEEEccc
Q 008336 410 FFKGM------PWLALPFGDARKASLSRKFKVS------GIPMLVAIGPSGRTITKEA 455 (569)
Q Consensus 410 ~~~~~------~~~~~~~~~d~~~~l~~~~~v~------~~Pt~~lid~~G~i~~~~~ 455 (569)
|++.+ ..+.||++.|....+++.|++. .+|++||||++|+|+++..
T Consensus 128 ~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~~~~g~~~p~~flID~~G~I~~~~~ 185 (240)
T 3qpm_A 128 WIITPRKQGGLGPMKIPLLSDLTHQISKDYGVYLEDQGHTLRGLFIIDEKGVLRQITM 185 (240)
T ss_dssp HHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEE
T ss_pred HHHHHHhhcCCCCCceeEEeCchHHHHHHhCCccccCCCccceEEEEcCCCeEEEEEe
Confidence 88765 2478899999999999999998 6899999999999999853
No 167
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.73 E-value=1.4e-17 Score=151.14 Aligned_cols=114 Identities=20% Similarity=0.298 Sum_probs=97.6
Q ss_pred cccCccCCc-eecC--CCceeecCCC-CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHH
Q 008336 14 LLSSSARDF-LIRS--NGDQVKLDSL-KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKG 88 (569)
Q Consensus 14 ~~g~~~pdf-~~~~--~g~~v~l~~~-~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~ 88 (569)
.+|.++|+| +.+. +|+.++++++ +|| +||+||++||++|+.++|.|.+++++ ++.+++|+++.+.+.+++
T Consensus 23 ~~G~~~P~f~l~~~~~~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~-----~v~vv~v~~~~~~~~~~~ 97 (168)
T 2b1k_A 23 LIGKPVPKFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ-----GIRVVGMNYKDDRQKAIS 97 (168)
T ss_dssp TTTSBCCCCEEEESSSTTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT-----TCCEEEEEESCCHHHHHH
T ss_pred ccCCcCCCeEeecccCCCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC-----CCEEEEEECCCChHHHHH
Confidence 679999999 5567 8999999985 899 99999999999999999999998875 388999999999999999
Q ss_pred HHHhCCCcccccCCchhHHHHHHhcCCCCccEEEEECCCCcEEEc
Q 008336 89 YFSKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 133 (569)
|+++++..+..+.. +....+++.|++.++|+++++|++|+++..
T Consensus 98 ~~~~~~~~~~~~~~-d~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 141 (168)
T 2b1k_A 98 WLKELGNPYALSLF-DGDGMLGLDLGVYGAPETFLIDGNGIIRYR 141 (168)
T ss_dssp HHHHHCCCCSEEEE-ETTCHHHHHHTCCSSSEEEEECTTSBEEEE
T ss_pred HHHHcCCCCceeeE-CcchHHHHHcCccccCEEEEECCCCeEEEE
Confidence 99998876553221 223468899999999999999999999864
No 168
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.73 E-value=1e-17 Score=149.79 Aligned_cols=116 Identities=18% Similarity=0.367 Sum_probs=96.8
Q ss_pred ccccCccCCc-eecCCC--------ceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCC
Q 008336 13 SLLSSSARDF-LIRSNG--------DQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDED 82 (569)
Q Consensus 13 ~~~g~~~pdf-~~~~~g--------~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~ 82 (569)
..+|.++|+| +.+.+| +.+++++++|| ++|+||++||++|+.++|.|.+++++ +++.+++|+++.+
T Consensus 8 ~~~g~~~p~f~l~~~~g~~~~~~~~~~~~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~----~~v~~v~v~~~~~ 83 (156)
T 1kng_A 8 ALIGRPAPQTALPPLEGLQADNVQVPGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKD----KRFQLVGINYKDA 83 (156)
T ss_dssp ----CBCCCCCBCCCTTCEETTEECCCBCGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHTTC----TTSEEEEEEESCC
T ss_pred HHhCCCCCCceeeeccCcccccccCceechHHhCCCEEEEEEEcccCHhHHHHHHHHHHHHhc----CCeEEEEEECCCC
Confidence 3679999999 556788 99999999999 99999999999999999999998765 3599999999999
Q ss_pred HHHHHHHHHhCCCcccccCCchhHHHHHHhcCCCCccEEEEECCCCcEEEc
Q 008336 83 DEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 133 (569)
.+.+++|++++++.+..+.. +....+++.|++.++|+++++|++|+++..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~v~~~P~~~~id~~G~i~~~ 133 (156)
T 1kng_A 84 ADNARRFLGRYGNPFGRVGV-DANGRASIEWGVYGVPETFVVGREGTIVYK 133 (156)
T ss_dssp HHHHHHHHHHHCCCCSEEEE-ETTSHHHHHTTCCSSCEEEEECTTSBEEEE
T ss_pred HHHHHHHHHHcCCCCceeee-CchhHHHHhcCcCccCeEEEEcCCCCEEEE
Confidence 99999999998876652221 222478899999999999999999999863
No 169
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.73 E-value=2.9e-17 Score=153.85 Aligned_cols=115 Identities=13% Similarity=0.138 Sum_probs=90.8
Q ss_pred cCCcccee-cCC-CCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC-------ChhH
Q 008336 336 SGDLDFVV-GKN-GGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR-------DQTS 406 (569)
Q Consensus 336 ~~~~~f~~-~~~-g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~-------~~~~ 406 (569)
...|+|.+ +.+ |+.++|++++||+|||+|||+||++| .++|.|++++++|+++ ++.||+|++|. +.+.
T Consensus 15 ~~~pdF~l~d~~~G~~v~Ls~~kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~--g~~vlgvs~d~f~~~e~~~~~~ 91 (207)
T 2r37_A 15 GTIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYGGLT-GQYIELNALQEELAPF--GLVILGFPCNQFGKQEPGENSE 91 (207)
T ss_dssp CCGGGCEEEBTTSSCEEEGGGGTTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGG--TEEEEEEECCCBTTCCCSCHHH
T ss_pred CccCCeEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccC--CEEEEEEECcccCcCCCCCHHH
Confidence 34689988 999 99999999999999999999999999 7999999999999876 79999999762 4567
Q ss_pred HHHHHh------cCCCcccccCchh--h----HH----HHHhc-------C--------------CCCccEEEEECCCCc
Q 008336 407 FDEFFK------GMPWLALPFGDAR--K----AS----LSRKF-------K--------------VSGIPMLVAIGPSGR 449 (569)
Q Consensus 407 ~~~~~~------~~~~~~~~~~~d~--~----~~----l~~~~-------~--------------v~~~Pt~~lid~~G~ 449 (569)
+++|++ +++ +.||++.+. + .. +.... + |...|++||||++|+
T Consensus 92 i~~f~~~~~~~~~~~-~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G~ 170 (207)
T 2r37_A 92 ILPTLKYVRPGGGFV-PNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGI 170 (207)
T ss_dssp HHHHHHHTSSCTTCC-CSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTSC
T ss_pred HHHHHHhcchhhccC-ccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCCc
Confidence 888998 666 677766431 1 11 11111 1 233489999999999
Q ss_pred EEEcc
Q 008336 450 TITKE 454 (569)
Q Consensus 450 i~~~~ 454 (569)
|+.+.
T Consensus 171 i~~~~ 175 (207)
T 2r37_A 171 PIMRW 175 (207)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99984
No 170
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.73 E-value=3.5e-17 Score=153.25 Aligned_cols=118 Identities=11% Similarity=0.102 Sum_probs=90.0
Q ss_pred cccCccCCc-eecCC-CceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCC-------CCH
Q 008336 14 LLSSSARDF-LIRSN-GDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD-------EDD 83 (569)
Q Consensus 14 ~~g~~~pdf-~~~~~-g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d-------~~~ 83 (569)
....++|+| +.+.+ |+.++|++++|| |||+|||+|||+| .++|.|++++++|+++| ++|++|++| .+.
T Consensus 12 ~~~~~~pdF~l~d~~~G~~v~Ls~~kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g-~~vlgvs~d~f~~~e~~~~ 89 (207)
T 2r37_A 12 GISGTIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYGGLT-GQYIELNALQEELAPFG-LVILGFPCNQFGKQEPGEN 89 (207)
T ss_dssp ---CCGGGCEEEBTTSSCEEEGGGGTTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGT-EEEEEEECCCBTTCCCSCH
T ss_pred cccCccCCeEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCC-EEEEEEECcccCcCCCCCH
Confidence 345789999 56788 999999999999 9999999999999 79999999999999876 999999976 356
Q ss_pred HHHHHHHH------hCCCcccccCCch--h--HH----HHHHh-------cC--------------CCCccEEEEECCCC
Q 008336 84 EAFKGYFS------KMPWLAVPFSDSE--T--RD----KLDEL-------FK--------------VMGIPHLVILDENG 128 (569)
Q Consensus 84 ~~~~~~~~------~~~~~~~~~~~~~--~--~~----~l~~~-------~~--------------v~~~P~~~lid~~G 128 (569)
+.+++|++ +++..+..+.+.+ . .. .+... ++ |...|++||||++|
T Consensus 90 ~~i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G 169 (207)
T 2r37_A 90 SEILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDG 169 (207)
T ss_dssp HHHHHHHHHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTS
T ss_pred HHHHHHHHhcchhhccCccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCC
Confidence 78899998 7777655544321 1 01 12111 11 23348999999999
Q ss_pred cEEEc
Q 008336 129 KVLSD 133 (569)
Q Consensus 129 ~i~~~ 133 (569)
+|+.+
T Consensus 170 ~i~~~ 174 (207)
T 2r37_A 170 IPIMR 174 (207)
T ss_dssp CEEEE
T ss_pred cEEEE
Confidence 99875
No 171
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.72 E-value=1.2e-17 Score=151.24 Aligned_cols=115 Identities=12% Similarity=0.117 Sum_probs=99.2
Q ss_pred cccCccCCc-ee-cCCCceeecCCC-CCc-EEEEEe-cCCCHhhHh-hHHHHHHHHHHhcCCCCE-EEEEEeCCCCHHHH
Q 008336 14 LLSSSARDF-LI-RSNGDQVKLDSL-KGK-IGLYFS-ASWCGPCQR-FTPILAEVYNELSRQGDF-EVIFVSGDEDDEAF 86 (569)
Q Consensus 14 ~~g~~~pdf-~~-~~~g~~v~l~~~-~gk-vlv~F~-a~wC~~C~~-~~p~l~~~~~~~~~~g~~-~vv~v~~d~~~~~~ 86 (569)
.+|+++|+| +. +.+|+.++|+++ +|| ++|+|| ++|||+|+. ++|.|++++++|++++ + +|++|+.| +.+..
T Consensus 4 ~~G~~aP~f~l~~~~~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~g-v~~vv~Is~d-~~~~~ 81 (167)
T 2wfc_A 4 KEGDKLPAVTVFGATPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKG-VDIIACMAVN-DSFVM 81 (167)
T ss_dssp CTTCBCCCCEEESSSTTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTT-CCEEEEEESS-CHHHH
T ss_pred CCCCcCCCcEeecCCCCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCC-CCEEEEEeCC-CHHHH
Confidence 469999999 55 789999999998 999 888875 999999999 9999999999998875 9 99999998 57788
Q ss_pred HHHHHhCCCc--ccccCCchhHHHHHHhcCCCCc-----------cEEEEECCCCcEEEc
Q 008336 87 KGYFSKMPWL--AVPFSDSETRDKLDELFKVMGI-----------PHLVILDENGKVLSD 133 (569)
Q Consensus 87 ~~~~~~~~~~--~~~~~~~~~~~~l~~~~~v~~~-----------P~~~lid~~G~i~~~ 133 (569)
++|+++.+.. +..+.|.+ ..+.+.||+... |+++|| ++|+|+..
T Consensus 82 ~~~~~~~~~~~~fp~l~D~~--~~~~~~~gv~~~~~~~~g~~~~~p~t~lI-~~G~I~~~ 138 (167)
T 2wfc_A 82 DAWGKAHGADDKVQMLADPG--GAFTKAVDMELDLSAVLGNVRSKRYSLVI-EDGVVTKV 138 (167)
T ss_dssp HHHHHHTTCTTTSEEEECTT--SHHHHHTTCEECCHHHHSSCEECCEEEEE-ETTEEEEE
T ss_pred HHHHHhcCCCcceEEEECCC--CcHHHHcCCccccccccCcccceEEEEEE-eCCEEEEE
Confidence 9999999876 55555544 478999998754 999999 99999975
No 172
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.72 E-value=1.2e-17 Score=151.42 Aligned_cols=114 Identities=21% Similarity=0.213 Sum_probs=98.5
Q ss_pred cccCccCCc-eecCCCceeecCCCCCc-EEEEEe-cCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHH
Q 008336 14 LLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYF 90 (569)
Q Consensus 14 ~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~ 90 (569)
.+|.++|+| +.+.+|+.+++++++|| ++|+|| ++||++|+.++|.|++++++ . ++.|++|+.| +.+.+++|+
T Consensus 21 ~~G~~aP~f~l~~~~G~~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~-~~~vv~is~d-~~~~~~~~~ 95 (166)
T 3p7x_A 21 NEGDFAPDFTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK---E-EGIVLTISAD-LPFAQKRWC 95 (166)
T ss_dssp CTTSBCCCCEEECTTSCEEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---T-TSEEEEEESS-CHHHHHHHH
T ss_pred CCCCCCCCeEEEcCCCCEEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc---C-CCEEEEEECC-CHHHHHHHH
Confidence 479999999 66789999999999999 999999 78999999999999999877 3 4999999988 678899999
Q ss_pred HhCCC-cccccCCchhHHHHHHhcCCCC------ccEEEEECCCCcEEEc
Q 008336 91 SKMPW-LAVPFSDSETRDKLDELFKVMG------IPHLVILDENGKVLSD 133 (569)
Q Consensus 91 ~~~~~-~~~~~~~~~~~~~l~~~~~v~~------~P~~~lid~~G~i~~~ 133 (569)
++++. .+..+.|.. ...+.+.|++.. +|+++|||++|+|+..
T Consensus 96 ~~~~~~~~~~l~D~~-~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~ 144 (166)
T 3p7x_A 96 ASAGLDNVITLSDHR-DLSFGENYGVVMEELRLLARAVFVLDADNKVVYK 144 (166)
T ss_dssp HHHTCSSCEEEECTT-TCHHHHHHTCEETTTTEECCEEEEECTTCBEEEE
T ss_pred HHcCCCceEEccCCc-hhHHHHHhCCccccCCceeeEEEEECCCCeEEEE
Confidence 99888 555555551 237899999985 8999999999999875
No 173
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.72 E-value=9.3e-18 Score=152.74 Aligned_cols=116 Identities=25% Similarity=0.433 Sum_probs=98.3
Q ss_pred CCcccee-cCCCCceecccCCCCEEEEEEecCCChh-HHhhhHHHHHHHHHHhhcC-CCeEEEEEeCCC---ChhHHHHH
Q 008336 337 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHWCPP-CRAFLPKLIDAYKKIKERN-ESLEVVFISSDR---DQTSFDEF 410 (569)
Q Consensus 337 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~wC~~-C~~~~~~l~~l~~~~~~~~-~~~~vv~is~d~---~~~~~~~~ 410 (569)
..|+|.+ +.+| .+++++++||++||+||++||++ |+.++|.|.+++++++++. +++.|++|++|. +++.+++|
T Consensus 15 ~~p~f~l~~~~g-~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~ 93 (172)
T 2k6v_A 15 KPVDFALEGPQG-PVRLSQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRY 93 (172)
T ss_dssp EECCCEEECSSS-EEEGGGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHH
T ss_pred CCCCeEEEcCCC-CCcHHHhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHH
Confidence 3588988 9999 99999999999999999999997 9999999999999987531 259999999984 46788999
Q ss_pred HhcCCCcccccCchhh---HHHHHhcCC---------------CCccEEEEECCCCcEEEccc
Q 008336 411 FKGMPWLALPFGDARK---ASLSRKFKV---------------SGIPMLVAIGPSGRTITKEA 455 (569)
Q Consensus 411 ~~~~~~~~~~~~~d~~---~~l~~~~~v---------------~~~Pt~~lid~~G~i~~~~~ 455 (569)
+++++ +.++++.|.. ..+++.|++ .++|+++||| +|+|+.+..
T Consensus 94 ~~~~~-~~~~~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~ 154 (172)
T 2k6v_A 94 AKAFH-PSFLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYS 154 (172)
T ss_dssp HHHHC-TTEEEECCCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEEC
T ss_pred HHHhC-CCcEEEeCCHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEEC
Confidence 99887 5677776655 577777764 5789999999 999999854
No 174
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.72 E-value=1.8e-17 Score=148.22 Aligned_cols=113 Identities=20% Similarity=0.314 Sum_probs=99.8
Q ss_pred cCCcccee-cCCC--------CceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhH
Q 008336 336 SGDLDFVV-GKNG--------GKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTS 406 (569)
Q Consensus 336 ~~~~~f~~-~~~g--------~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~ 406 (569)
...|+|.+ +.+| +.+++++++||+++|+||++||++|+.++|.|++++++ . ++.+++|++|.+.+.
T Consensus 12 ~~~p~f~l~~~~g~~~~~~~~~~~~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~---~v~~v~v~~~~~~~~ 86 (156)
T 1kng_A 12 RPAPQTALPPLEGLQADNVQVPGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKD--K---RFQLVGINYKDAADN 86 (156)
T ss_dssp CBCCCCCBCCCTTCEETTEECCCBCGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHTTC--T---TSEEEEEEESCCHHH
T ss_pred CCCCCceeeeccCcccccccCceechHHhCCCEEEEEEEcccCHhHHHHHHHHHHHHhc--C---CeEEEEEECCCCHHH
Confidence 34588987 8888 99999999999999999999999999999999888765 2 499999999999999
Q ss_pred HHHHHhcCCCcccc-cCchhhHHHHHhcCCCCccEEEEECCCCcEEEcc
Q 008336 407 FDEFFKGMPWLALP-FGDARKASLSRKFKVSGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 407 ~~~~~~~~~~~~~~-~~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~ 454 (569)
+++|+++++ +.+| +..+....+++.|++.++|++++||++|+++.+.
T Consensus 87 ~~~~~~~~~-~~~~~~~~d~~~~~~~~~~v~~~P~~~~id~~G~i~~~~ 134 (156)
T 1kng_A 87 ARRFLGRYG-NPFGRVGVDANGRASIEWGVYGVPETFVVGREGTIVYKL 134 (156)
T ss_dssp HHHHHHHHC-CCCSEEEEETTSHHHHHTTCCSSCEEEEECTTSBEEEEE
T ss_pred HHHHHHHcC-CCCceeeeCchhHHHHhcCcCccCeEEEEcCCCCEEEEE
Confidence 999999887 4566 5667778899999999999999999999999874
No 175
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.72 E-value=1.7e-17 Score=167.36 Aligned_cols=118 Identities=20% Similarity=0.185 Sum_probs=104.3
Q ss_pred ccccCccCCce-----e-cCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCC-----
Q 008336 13 SLLSSSARDFL-----I-RSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD----- 80 (569)
Q Consensus 13 ~~~g~~~pdf~-----~-~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d----- 80 (569)
..+|.++|+|. + +.+|+.+++++++|| +||+||++||++|+.++|.|.+++++|++++ +.|++|++|
T Consensus 51 l~vG~~aPdF~~~~~wL~d~dG~~vsLsdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~-v~vi~Vs~d~~~~~ 129 (352)
T 2hyx_A 51 LESCGTAPDLKGITGWLNTPGNKPIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSG-LAVIGVHTPEYAFE 129 (352)
T ss_dssp CCCCCBCCCCCSCCEEESSGGGCCCCGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGT-EEEEEEECCSSGGG
T ss_pred cCCCCcCCCccccccccCCCCCCEEcHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCC-eEEEEEECCccccc
Confidence 35799999997 5 468999999999999 9999999999999999999999999998764 999999986
Q ss_pred CCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCCCCccEEEEECCCCcEEEc
Q 008336 81 EDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 133 (569)
++.+.+++|++++++.+..+.+.. ..+.+.|+|.++|+++|||++|+|+..
T Consensus 130 d~~~~~~~~~~~~~l~fpv~~D~~--~~l~~~ygV~~~Pt~~lID~~G~Iv~~ 180 (352)
T 2hyx_A 130 KVPGNVAKGAANLGISYPIALDNN--YATWTNYRNRYWPAEYLIDATGTVRHI 180 (352)
T ss_dssp GCHHHHHHHHHHHTCCSCEEECTT--SHHHHHTTCCEESEEEEECTTSBEEEE
T ss_pred CCHHHHHHHHHHcCCCccEEeCCc--HHHHHHcCCCccCEEEEEeCCCeEEEE
Confidence 478899999999987766555544 368899999999999999999999874
No 176
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.72 E-value=7.2e-18 Score=157.43 Aligned_cols=114 Identities=21% Similarity=0.186 Sum_probs=101.3
Q ss_pred CCcccee-cCCCCceecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcC
Q 008336 337 GDLDFVV-GKNGGKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGM 414 (569)
Q Consensus 337 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~ 414 (569)
..|+|.+ +.+|+.++|++++||++||+|| ++||++|+.++|.|+++++++ . +++|++|+.| +++.+++|++++
T Consensus 57 ~aPdf~l~d~~G~~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~---~v~vv~Is~D-~~~~~~~~~~~~ 131 (200)
T 3zrd_A 57 KAKDFTLVAKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-E---NTVVLCISSD-LPFAQSRFCGAE 131 (200)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-T---TEEEEEEESS-CHHHHTTCTTTT
T ss_pred CCCCeEEECCCCCEEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-C---CCEEEEEECC-CHHHHHHHHHHc
Confidence 4589988 9999999999999999999999 789999999999999999999 2 5999999998 557788888888
Q ss_pred CCcccccCchh-hHHHHHhcCCC---------CccEEEEECCCCcEEEccc
Q 008336 415 PWLALPFGDAR-KASLSRKFKVS---------GIPMLVAIGPSGRTITKEA 455 (569)
Q Consensus 415 ~~~~~~~~~d~-~~~l~~~~~v~---------~~Pt~~lid~~G~i~~~~~ 455 (569)
+.-.+|++.|. ...+++.|++. .+|++||||++|+|+++..
T Consensus 132 ~~~~f~~l~D~~~~~~~~~ygv~~~~~~~~g~~~p~~~lID~~G~I~~~~~ 182 (200)
T 3zrd_A 132 GLSNVITLSTLRGADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVIYSEL 182 (200)
T ss_dssp TCTTEEEEETTSCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEE
T ss_pred CCCCceEEecCchHHHHHHhCceeecccCCCccccEEEEECCCCeEEEEEe
Confidence 73388998888 88999999986 3699999999999999864
No 177
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.57 E-value=3.4e-19 Score=160.21 Aligned_cols=117 Identities=28% Similarity=0.473 Sum_probs=102.1
Q ss_pred cccCccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHH-HHHHhc-CCCCEEEEEEeCCCCHHHHHHH
Q 008336 14 LLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAE-VYNELS-RQGDFEVIFVSGDEDDEAFKGY 89 (569)
Q Consensus 14 ~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~-~~~~~~-~~g~~~vv~v~~d~~~~~~~~~ 89 (569)
.+|.++|+| +.+.+|+.+++++++|| ++|+||++||++|+.++|.|.+ +++++. .. ++.+++|++|.+.+.+++|
T Consensus 8 ~~g~~~p~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~-~~~vv~v~~d~~~~~~~~~ 86 (159)
T 2ls5_A 8 RIGEMAPDFTITLTDGKQVTLSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNA-DFALIGIDRDEPLEKVLAF 86 (159)
Confidence 479999999 55789999999999999 9999999999999999999998 988887 44 5999999999888889999
Q ss_pred HHhCCCcccccCCchhHHHHHHhcC--CCCccEEEEECCCCcEEEc
Q 008336 90 FSKMPWLAVPFSDSETRDKLDELFK--VMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~l~~~~~--v~~~P~~~lid~~G~i~~~ 133 (569)
.+++++.+..+.+.. ..+.+.|+ +.++|+++|+|++|+++..
T Consensus 87 ~~~~~~~~~~~~d~~--~~~~~~~~~~~~~~P~~~lid~~G~i~~~ 130 (159)
T 2ls5_A 87 AKSTGVTYPLGLDPG--ADIFAKYALRDAGITRNVLIDREGKIVKL 130 (159)
Confidence 999888666666544 46889999 5669999999999999875
No 178
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.72 E-value=9e-18 Score=151.95 Aligned_cols=115 Identities=19% Similarity=0.173 Sum_probs=98.5
Q ss_pred cccCccCCc-eecCCCceeecCCCCCc-EEEEEe-cCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHH
Q 008336 14 LLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYF 90 (569)
Q Consensus 14 ~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~ 90 (569)
.+|.++|+| +.+.+|+.+++++++|| ++|+|| ++||++|+.++|.|+++++++ . +++|++|+.| +.+.+++|+
T Consensus 18 ~~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~-~v~vv~Is~d-~~~~~~~~~ 93 (165)
T 1q98_A 18 QVGEIVENFILVGNDLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--S-NTIVLCISAD-LPFAQARFC 93 (165)
T ss_dssp CTTCBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--T-TEEEEEEESS-CHHHHTTCT
T ss_pred CCCCCCCCeEEECCCCCEEehHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--C-CCEEEEEeCC-CHHHHHHHH
Confidence 579999999 56789999999999999 999999 899999999999999999999 4 4999999997 567788899
Q ss_pred HhCCC-cccccCCchhHHHHHHhcCCCC---------ccEEEEECCCCcEEEc
Q 008336 91 SKMPW-LAVPFSDSETRDKLDELFKVMG---------IPHLVILDENGKVLSD 133 (569)
Q Consensus 91 ~~~~~-~~~~~~~~~~~~~l~~~~~v~~---------~P~~~lid~~G~i~~~ 133 (569)
+++++ .+..+.|.. ...+.+.|++.. .|+++|||++|+|+..
T Consensus 94 ~~~~~~~~~~l~D~~-~~~~~~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~ 145 (165)
T 1q98_A 94 GAEGIENAKTVSTFR-NHALHSQLGVDIQTGPLAGLTSRAVIVLDEQNNVLHS 145 (165)
T ss_dssp TTTTCTTEEEEECTT-CTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEE
T ss_pred HHcCCCceEEeeccc-cchHHHHhCceecccccCCccceeEEEEcCCCEEEEE
Confidence 88887 455555541 246889999853 5999999999999875
No 179
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.57 E-value=3.5e-19 Score=156.90 Aligned_cols=122 Identities=35% Similarity=0.660 Sum_probs=101.8
Q ss_pred ccCCc-eecCCCceeecCC-CCCc--EEEEEecCCCHhhHhhHHHHHHHHHHhcCCC-CEEEEEEeCCCCHHHHHHHHHh
Q 008336 18 SARDF-LIRSNGDQVKLDS-LKGK--IGLYFSASWCGPCQRFTPILAEVYNELSRQG-DFEVIFVSGDEDDEAFKGYFSK 92 (569)
Q Consensus 18 ~~pdf-~~~~~g~~v~l~~-~~gk--vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g-~~~vv~v~~d~~~~~~~~~~~~ 92 (569)
.+|+| +.+.+|+.+++++ ++|| ++|+||++||++|+.++|.|.++++++++.+ ++.+++|++|.+.+.+++|+++
T Consensus 3 ~~p~~~l~~~~g~~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~ 82 (143)
T 2lus_A 3 FIQGIKLVKKNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMME 82 (143)
Confidence 57899 5578999999999 9998 8999999999999999999999999996432 5999999999888899999998
Q ss_pred CCCcccccCC-chhHHHHHHhcCCCCccEEEEECCCCcEEEcCCccee
Q 008336 93 MPWLAVPFSD-SETRDKLDELFKVMGIPHLVILDENGKVLSDGGVEII 139 (569)
Q Consensus 93 ~~~~~~~~~~-~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~ 139 (569)
++..+..+.. .+....+++.|++.++|+++++|++|+++.+.+...+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~ 130 (143)
T 2lus_A 83 SHGDWLAIPYRSGPASNVTAKYGITGIPALVIVKKDGTLISMNGRGEV 130 (143)
Confidence 8755443322 2223468899999999999999999999987665544
No 180
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.72 E-value=4.7e-17 Score=156.19 Aligned_cols=116 Identities=19% Similarity=0.243 Sum_probs=98.6
Q ss_pred cccCccCCcee-c---CCCceeecCCCCCc-EEEEEec-CCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHH
Q 008336 14 LLSSSARDFLI-R---SNGDQVKLDSLKGK-IGLYFSA-SWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFK 87 (569)
Q Consensus 14 ~~g~~~pdf~~-~---~~g~~v~l~~~~gk-vlv~F~a-~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~ 87 (569)
.+|.++|+|.+ + .+|+.++|++++|| +||+||+ +||++|+.++|.|.+++++|++.+ +.|++|++| +.+..+
T Consensus 49 ~vG~~aPdF~l~~~~d~~G~~vsLsd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~g-v~vv~Is~D-~~~~~~ 126 (240)
T 3qpm_A 49 KISKPAPQWEGTAVINGEFKELKLSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAIN-TEVVACSVD-SQFTHL 126 (240)
T ss_dssp CTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTT-EEEEEEESS-CHHHHH
T ss_pred CCCCCCCCcEeeeeeCCCCcEEEHHHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCC-CEEEEEECC-CHHHHH
Confidence 58999999953 2 34679999999999 9999999 999999999999999999999875 999999998 466778
Q ss_pred HHHHhC-------CCcccccCCchhHHHHHHhcCCC------CccEEEEECCCCcEEEc
Q 008336 88 GYFSKM-------PWLAVPFSDSETRDKLDELFKVM------GIPHLVILDENGKVLSD 133 (569)
Q Consensus 88 ~~~~~~-------~~~~~~~~~~~~~~~l~~~~~v~------~~P~~~lid~~G~i~~~ 133 (569)
+|+++. ++.+..+.|.+ ..+.+.|++. .+|++||||++|+|+..
T Consensus 127 ~~~~~~~~~~~~~~~~fp~l~D~~--~~v~~~ygv~~~~~g~~~p~~flID~~G~I~~~ 183 (240)
T 3qpm_A 127 AWIITPRKQGGLGPMKIPLLSDLT--HQISKDYGVYLEDQGHTLRGLFIIDEKGVLRQI 183 (240)
T ss_dssp HHHHSCGGGTCCCSCSSCEEECTT--SHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred HHHHHHHhhcCCCCCceeEEeCch--HHHHHHhCCccccCCCccceEEEEcCCCeEEEE
Confidence 888875 45555555544 4799999997 68999999999999875
No 181
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.72 E-value=2.5e-17 Score=149.04 Aligned_cols=115 Identities=15% Similarity=0.188 Sum_probs=101.1
Q ss_pred CCcccee--cCCCCceecccC-CCCEEEEEEe-cCCChhHHh-hhHHHHHHHHHHhhcCCCe-EEEEEeCCCChhHHHHH
Q 008336 337 GDLDFVV--GKNGGKVPVSDL-AGKTILLYFS-AHWCPPCRA-FLPKLIDAYKKIKERNESL-EVVFISSDRDQTSFDEF 410 (569)
Q Consensus 337 ~~~~f~~--~~~g~~v~l~~~-~gk~vll~F~-a~wC~~C~~-~~~~l~~l~~~~~~~~~~~-~vv~is~d~~~~~~~~~ 410 (569)
..|+|.+ +.+|++++|+++ +||++||+|| ++|||+|+. ++|.|++++++++++ ++ +|++||.| +++..++|
T Consensus 8 ~aP~f~l~~~~~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~--gv~~vv~Is~d-~~~~~~~~ 84 (167)
T 2wfc_A 8 KLPAVTVFGATPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGK--GVDIIACMAVN-DSFVMDAW 84 (167)
T ss_dssp BCCCCEEESSSTTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHT--TCCEEEEEESS-CHHHHHHH
T ss_pred cCCCcEeecCCCCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC--CCCEEEEEeCC-CHHHHHHH
Confidence 4688876 789999999998 9999999986 999999999 999999999999876 69 99999998 56788899
Q ss_pred HhcCCCc-ccccCchhhHHHHHhcCCCCc-----------cEEEEECCCCcEEEccc
Q 008336 411 FKGMPWL-ALPFGDARKASLSRKFKVSGI-----------PMLVAIGPSGRTITKEA 455 (569)
Q Consensus 411 ~~~~~~~-~~~~~~d~~~~l~~~~~v~~~-----------Pt~~lid~~G~i~~~~~ 455 (569)
+++++.. .||++.|.+.++++.|++... |++||| ++|+|+++..
T Consensus 85 ~~~~~~~~~fp~l~D~~~~~~~~~gv~~~~~~~~g~~~~~p~t~lI-~~G~I~~~~~ 140 (167)
T 2wfc_A 85 GKAHGADDKVQMLADPGGAFTKAVDMELDLSAVLGNVRSKRYSLVI-EDGVVTKVNV 140 (167)
T ss_dssp HHHTTCTTTSEEEECTTSHHHHHTTCEECCHHHHSSCEECCEEEEE-ETTEEEEEEE
T ss_pred HHhcCCCcceEEEECCCCcHHHHcCCccccccccCcccceEEEEEE-eCCEEEEEEe
Confidence 9988732 399999999999999998754 999999 9999999854
No 182
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.72 E-value=5e-17 Score=154.15 Aligned_cols=117 Identities=21% Similarity=0.265 Sum_probs=99.5
Q ss_pred ccccCccCCceec----CCCceeecCCCCCc-EEEEEe-cCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHH
Q 008336 13 SLLSSSARDFLIR----SNGDQVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAF 86 (569)
Q Consensus 13 ~~~g~~~pdf~~~----~~g~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~ 86 (569)
-.+|.++|+|.+. .+|+.+++++++|| +||+|| ++||++|+.++|.|.+++++|++.+ ++|++|++| +.+..
T Consensus 27 l~~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~-v~vv~Is~D-~~~~~ 104 (220)
T 1zye_A 27 PAVTQHAPYFKGTAVVSGEFKEISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVN-CEVVAVSVD-SHFSH 104 (220)
T ss_dssp CCTTSBCCCCEEEEECSSSEEEEEGGGGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTT-EEEEEEESS-CHHHH
T ss_pred ccCCCCCCCcEEEeeeCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC-CEEEEEECC-CHHHH
Confidence 3679999999542 46899999999999 999999 9999999999999999999998775 999999999 46678
Q ss_pred HHHHHhC-------CCcccccCCchhHHHHHHhcCCC------CccEEEEECCCCcEEEc
Q 008336 87 KGYFSKM-------PWLAVPFSDSETRDKLDELFKVM------GIPHLVILDENGKVLSD 133 (569)
Q Consensus 87 ~~~~~~~-------~~~~~~~~~~~~~~~l~~~~~v~------~~P~~~lid~~G~i~~~ 133 (569)
++|++++ ++.+..+.|.. ..+.+.|++. ++|+++|||++|+|+..
T Consensus 105 ~~~~~~~~~~~g~~~~~fp~l~D~~--~~i~~~ygv~~~~~g~~~P~~~liD~~G~I~~~ 162 (220)
T 1zye_A 105 LAWINTPRKNGGLGHMNIALLSDLT--KQISRDYGVLLEGPGLALRGLFIIDPNGVIKHL 162 (220)
T ss_dssp HHHHTSCGGGTCCCSCSSEEEECTT--SHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred HHHHHHHHHhCCCcCCceEEEECCc--HHHHHHhCCeecCCCcccceEEEECCCCEEEEE
Confidence 8888876 44444444533 4789999999 99999999999999875
No 183
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.72 E-value=2e-17 Score=150.09 Aligned_cols=113 Identities=23% Similarity=0.255 Sum_probs=97.9
Q ss_pred cCCcccee-cC--CCCceecccC-CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHH
Q 008336 336 SGDLDFVV-GK--NGGKVPVSDL-AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFF 411 (569)
Q Consensus 336 ~~~~~f~~-~~--~g~~v~l~~~-~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~ 411 (569)
...|+|.+ +. +|+.+.++++ +||++||+||++||++|+.++|.|++++++ ++.|++|++|.+.+.+++|+
T Consensus 26 ~~~P~f~l~~~~~~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~------~v~vv~v~~~~~~~~~~~~~ 99 (168)
T 2b1k_A 26 KPVPKFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ------GIRVVGMNYKDDRQKAISWL 99 (168)
T ss_dssp SBCCCCEEEESSSTTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT------TCCEEEEEESCCHHHHHHHH
T ss_pred CcCCCeEeecccCCCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC------CCEEEEEECCCChHHHHHHH
Confidence 44689988 77 8999999885 899999999999999999999999888765 38999999999989999999
Q ss_pred hcCCCcccc-cCchhhHHHHHhcCCCCccEEEEECCCCcEEEccc
Q 008336 412 KGMPWLALP-FGDARKASLSRKFKVSGIPMLVAIGPSGRTITKEA 455 (569)
Q Consensus 412 ~~~~~~~~~-~~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~ 455 (569)
++++ +.++ +..|....+++.|+|.++|++++||++|+++.+..
T Consensus 100 ~~~~-~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~ 143 (168)
T 2b1k_A 100 KELG-NPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHA 143 (168)
T ss_dssp HHHC-CCCSEEEEETTCHHHHHHTCCSSSEEEEECTTSBEEEEEE
T ss_pred HHcC-CCCceeeECcchHHHHHcCccccCEEEEECCCCeEEEEEe
Confidence 8877 3455 44567778999999999999999999999998743
No 184
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.71 E-value=1.9e-17 Score=149.33 Aligned_cols=115 Identities=18% Similarity=0.282 Sum_probs=99.5
Q ss_pred cccCccCCcee---cCCC--ceeecCC-CCCc-EEEEEe-cCCCHhhH-hhHHHHHHHHHHhcCCCCEE-EEEEeCCCCH
Q 008336 14 LLSSSARDFLI---RSNG--DQVKLDS-LKGK-IGLYFS-ASWCGPCQ-RFTPILAEVYNELSRQGDFE-VIFVSGDEDD 83 (569)
Q Consensus 14 ~~g~~~pdf~~---~~~g--~~v~l~~-~~gk-vlv~F~-a~wC~~C~-~~~p~l~~~~~~~~~~g~~~-vv~v~~d~~~ 83 (569)
.+|+++|+|.+ +.+| +.+++++ ++|| ++|+|| ++||++|+ .++|.|++++++|++++ ++ |++|+.| +.
T Consensus 5 ~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~-v~~vv~Is~d-~~ 82 (162)
T 1tp9_A 5 AVGDVLPDGKLAYFDEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKG-VTEILCISVN-DP 82 (162)
T ss_dssp CTTCBCCCCEEEEECTTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTT-CCCEEEEESS-CH
T ss_pred CCCCCCCCeEEEeecCCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCC-CCEEEEEECC-CH
Confidence 47999999954 6799 9999999 8999 999999 89999999 99999999999998775 99 9999998 57
Q ss_pred HHHHHHHHhCCC--cccccCCchhHHHHHHhcCCC------C-----ccEEEEECCCCcEEEc
Q 008336 84 EAFKGYFSKMPW--LAVPFSDSETRDKLDELFKVM------G-----IPHLVILDENGKVLSD 133 (569)
Q Consensus 84 ~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~v~------~-----~P~~~lid~~G~i~~~ 133 (569)
+..++|+++++. .+..+.|.+ ..+.+.||+. + .|+++||| +|+|+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~D~~--~~~~~~~gv~~~~~~~g~~~~~~p~~~vid-~G~i~~~ 142 (162)
T 1tp9_A 83 FVMKAWAKSYPENKHVKFLADGS--ATYTHALGLELDLQEKGLGTRSRRFALLVD-DLKVKAA 142 (162)
T ss_dssp HHHHHHHHTCTTCSSEEEEECTT--SHHHHHTTCEEEETTTTSEEEECCEEEEEE-TTEEEEE
T ss_pred HHHHHHHHhcCCCCCeEEEECCC--chHHHHcCcccccccCCCCccceeEEEEEE-CCEEEEE
Confidence 889999999987 454455544 4789999986 3 79999999 9999875
No 185
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.71 E-value=1.6e-15 Score=156.45 Aligned_cols=285 Identities=13% Similarity=0.175 Sum_probs=154.4
Q ss_pred cCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcC----CCCEEEEEEeCCCCHHHHHHHHHhCCCcccc
Q 008336 25 RSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSR----QGDFEVIFVSGDEDDEAFKGYFSKMPWLAVP 99 (569)
Q Consensus 25 ~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~----~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~ 99 (569)
.++++.+...--.++ ++|+|||+||++|+++.|.+.++++.++. .+++.++.|+++...
T Consensus 9 ~l~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~---------------- 72 (382)
T 2r2j_A 9 SLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHS---------------- 72 (382)
T ss_dssp BCCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCH----------------
T ss_pred ECCHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccH----------------
Confidence 344444432112478 99999999999999999999999999964 335999999998763
Q ss_pred cCCchhHHHHHHhcCCCCccEEEEECCCCcEEEcCCcceeecccCCCCCccHHHHHHHHHHHHHHHhhcccccccccCCC
Q 008336 100 FSDSETRDKLDELFKVMGIPHLVILDENGKVLSDGGVEIIREYGVEGYPFTVERIKEMKEQEERAKREQSLRSVLTSHSR 179 (569)
Q Consensus 100 ~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~ 179 (569)
.+++.|+|+++||++++ ++|+++.+ .+.. +.+.+.+.+++.... ...+..+..
T Consensus 73 --------~l~~~~~v~~~Pt~~~f-~~G~~~~~-------~~~G---~~~~~~l~~~i~~~~----~~~v~~l~~---- 125 (382)
T 2r2j_A 73 --------DIAQRYRISKYPTLKLF-RNGMMMKR-------EYRG---QRSVKALADYIRQQK----SDPIQEIRD---- 125 (382)
T ss_dssp --------HHHHHTTCCEESEEEEE-ETTEEEEE-------ECCS---CCSHHHHHHHHHHHH----SCCCEEC------
T ss_pred --------HHHHhcCCCcCCEEEEE-eCCcEeee-------eecC---cchHHHHHHHHHHhc----cCCceecCC----
Confidence 58999999999999998 67876531 1211 345666666654421 111111100
Q ss_pred ceeecCCCceeeeccccCcEEEEEEecCCcccchhhhHHHHHHHHHHhcCCCceEEEEeeccccHHHHHHHhcCCCcccc
Q 008336 180 DFVISSDGRKISVSDLEGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLAL 259 (569)
Q Consensus 180 d~~~~~~~~~~~~~~~~gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ei~~v~~d~~~~~~~~~~~~~~~~~~ 259 (569)
.+.+.... ..+.+++.|+..++. ...+.+.+++..++.. +.|.....+
T Consensus 126 -------~~~l~~l~-~~~~~~v~ff~~~~~---~~~~~f~~~A~~~~~~-----~~F~~~~~~---------------- 173 (382)
T 2r2j_A 126 -------LAEITTLD-RSKRNIIGYFEQKDS---DNYRVFERVANILHDD-----CAFLSAFGD---------------- 173 (382)
T ss_dssp ------------------CCEEEEEESCSSS---HHHHHHHHHHHHHTTT-----CEEEEEESC----------------
T ss_pred -------HHHHHHhc-CCCCEEEEEECCCCC---hhHHHHHHHHHHhhcc-----ceEEEEehh----------------
Confidence 00111111 223344445555432 3355677788888654 222211111
Q ss_pred cCCchhHHHHHhhcccCCCceEEEECCCCCchhhhhHHHHHhhCCCCCCC-ChHHHHHHHHHHHHHHhhhhhhhhhccCC
Q 008336 260 PFKDKSREKLARYFELSTLPTLVIIGPDGKTLHSNVAEAIEEHGVGAFPF-TPEKFAELAEIQRAKEESQTLESVLVSGD 338 (569)
Q Consensus 260 ~~~d~~~~~l~~~f~v~~~Ptlvi~~~~g~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 338 (569)
+++.+++++.| +++...+..... +.+.| .+ +.+.+..++..... +.+
T Consensus 174 ---------~~~~~~v~~~p-i~~~~~~~~~~~------~~y~g----~~~~~~~l~~fi~~~~~----p~v-------- 221 (382)
T 2r2j_A 174 ---------VSKPERYSGDN-IIYKPPGHSAPD------MVYLG----AMTNFDVTYNWIQDKCV----PLV-------- 221 (382)
T ss_dssp ---------C--------CE-EEEECSSSSSCC------EECCS----CTTCHHHHHHHHHHHHS----CSS--------
T ss_pred ---------hHHhhCCCCCc-eEECCCCCCCcC------cccCC----CCCCHHHHHHHHHhccc----Cce--------
Confidence 13456788889 555543111100 00001 23 56777777764331 100
Q ss_pred ccceecCCCCceecccCCCCEEEEEEecCCChh-HHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCc
Q 008336 339 LDFVVGKNGGKVPVSDLAGKTILLYFSAHWCPP-CRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWL 417 (569)
Q Consensus 339 ~~f~~~~~g~~v~l~~~~gk~vll~F~a~wC~~-C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~ 417 (569)
+.+.- .+...+ +. .+++++|.|+.++|.. +..+...+.+++.++++ .+.++.++.+...
T Consensus 222 ~elt~-~~~~~~-~~--~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~---~i~f~~id~~~~~------------- 281 (382)
T 2r2j_A 222 REITF-ENGEEL-TE--EGLPFLILFHMKEDTESLEIFQNEVARQLISEKG---TINFLHADCDKFR------------- 281 (382)
T ss_dssp EECCH-HHHHHH-HT--TCCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTT---TSEEEEEETTTTH-------------
T ss_pred EecCh-hhHHHH-hc--CCCcEEEEEecCCchHHHHHHHHHHHHHHHHhCC---eeEEEEEchHHhH-------------
Confidence 00000 000011 11 2678889999988743 55555555555555543 4888888766443
Q ss_pred ccccCchhhHHHHHhcCCC--CccEEEEECC
Q 008336 418 ALPFGDARKASLSRKFKVS--GIPMLVAIGP 446 (569)
Q Consensus 418 ~~~~~~d~~~~l~~~~~v~--~~Pt~~lid~ 446 (569)
.+.+.||+. .+|.+++++.
T Consensus 282 ----------~~~~~~gl~~~~~P~i~i~~~ 302 (382)
T 2r2j_A 282 ----------HPLLHIQKTPADCPVIAIDSF 302 (382)
T ss_dssp ----------HHHHHTTCCGGGCSEEEEECS
T ss_pred ----------HHHHHcCCCccCCCEEEEEcc
Confidence 356788886 6899988865
No 186
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.71 E-value=1.7e-17 Score=152.37 Aligned_cols=116 Identities=13% Similarity=0.187 Sum_probs=97.5
Q ss_pred ccccCccCCc-eecC--CC-ceeecCC-CCCc-E-EEEEecCCCHhhHh-hHHHHHHHHHHhcCCCCEE-EEEEeCCCCH
Q 008336 13 SLLSSSARDF-LIRS--NG-DQVKLDS-LKGK-I-GLYFSASWCGPCQR-FTPILAEVYNELSRQGDFE-VIFVSGDEDD 83 (569)
Q Consensus 13 ~~~g~~~pdf-~~~~--~g-~~v~l~~-~~gk-v-lv~F~a~wC~~C~~-~~p~l~~~~~~~~~~g~~~-vv~v~~d~~~ 83 (569)
-.+|.++|+| +.+. +| +.+++++ ++|| + |++||++|||+|+. ++|.|++++++|+++| +. |++|+.| +.
T Consensus 26 l~vG~~aPdf~l~~~~~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~g-v~~vv~Is~d-~~ 103 (184)
T 3uma_A 26 IAVGDKLPNATFKEKTADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARG-VDDIAVVAVN-DL 103 (184)
T ss_dssp CCTTCBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTT-CCEEEEEESS-CH
T ss_pred CCCCCCCCCcEeecccCCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcC-CCEEEEEECC-CH
Confidence 3679999999 4455 89 9999999 8999 5 55567999999999 7999999999999886 88 9999998 57
Q ss_pred HHHHHHHHhCCCc--ccccCCchhHHHHHHhcCCC-----------CccEEEEECCCCcEEEc
Q 008336 84 EAFKGYFSKMPWL--AVPFSDSETRDKLDELFKVM-----------GIPHLVILDENGKVLSD 133 (569)
Q Consensus 84 ~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~v~-----------~~P~~~lid~~G~i~~~ 133 (569)
+..++|.++.+.. +..+.|.+ ..+++.||+. ..|++|||| +|+|++.
T Consensus 104 ~~~~~f~~~~~~~~~fp~l~D~~--~~va~~yGv~~~~~~~g~g~~~~r~tfiId-dG~I~~~ 163 (184)
T 3uma_A 104 HVMGAWATHSGGMGKIHFLSDWN--AAFTKAIGMEIDLSAGTLGIRSKRYSMLVE-DGVVKAL 163 (184)
T ss_dssp HHHHHHHHHHTCTTTSEEEECTT--CHHHHHTTCEEEEGGGTCEEEECCEEEEEE-TTEEEEE
T ss_pred HHHHHHHHHhCCCCceEEEEcCc--hHHHHHcCCceeccccCCcccceeEEEEEC-CCEEEEE
Confidence 7889999998887 66666655 4799999985 358899996 9999874
No 187
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.71 E-value=9.6e-17 Score=149.98 Aligned_cols=123 Identities=20% Similarity=0.309 Sum_probs=96.6
Q ss_pred ccccccCcc--CCc-eecCCCceeecCCCCCc-EEEEEecCCCHh-hHhhHHHHHHHHHHhcCC--CCEEEEEEeCCC--
Q 008336 11 IQSLLSSSA--RDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGP-CQRFTPILAEVYNELSRQ--GDFEVIFVSGDE-- 81 (569)
Q Consensus 11 ~~~~~g~~~--pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~-C~~~~p~l~~~~~~~~~~--g~~~vv~v~~d~-- 81 (569)
....+|.++ |+| +.+.+|+.+++++++|| +||+||++||++ |+.++|.|.++++++.++ .++.|++|++|.
T Consensus 11 ~~~~~g~~~~~p~f~l~d~~G~~v~l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~ 90 (200)
T 2b7k_A 11 ANRGYGKPSLGGPFHLEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPAR 90 (200)
T ss_dssp -----CCCCCCCCCEEEETTSCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTT
T ss_pred hHhccCCCCcCCCEEEEcCCCCEEeHHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCC
Confidence 345678886 999 56789999999999999 999999999997 999999999999988753 259999999994
Q ss_pred -CHHHHHHHHHhCCCcccccCC-chhHHHHHHhcCCC-Ccc---------------EEEEECCCCcEEEc
Q 008336 82 -DDEAFKGYFSKMPWLAVPFSD-SETRDKLDELFKVM-GIP---------------HLVILDENGKVLSD 133 (569)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~v~-~~P---------------~~~lid~~G~i~~~ 133 (569)
+++.+++|+++++..+..+.. .+....+++.|++. +.| +++|||++|+|+..
T Consensus 91 d~~~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~ 160 (200)
T 2b7k_A 91 DSPAVLKEYLSDFHPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDA 160 (200)
T ss_dssp CCHHHHHHHHTTSCTTCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEE
T ss_pred CCHHHHHHHHHHcCCCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEE
Confidence 788999999998765544433 33345788899987 344 78999999999874
No 188
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.71 E-value=1.5e-17 Score=155.37 Aligned_cols=115 Identities=21% Similarity=0.269 Sum_probs=99.6
Q ss_pred cccCccCCc-eecCCCceeecCCCCCc-EEEEEe-cCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHH
Q 008336 14 LLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYF 90 (569)
Q Consensus 14 ~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~ 90 (569)
.+|.++|+| +.+.+|+.++|++++|| ++|+|| ++||++|+.++|.|++++++| + +++|++|+.| +.+.+++|+
T Consensus 53 ~~G~~aPdf~l~d~~G~~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~-~v~vv~Is~D-~~~~~~~~~ 128 (200)
T 3zrd_A 53 QIGDKAKDFTLVAKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--E-NTVVLCISSD-LPFAQSRFC 128 (200)
T ss_dssp CTTCBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--T-TEEEEEEESS-CHHHHTTCT
T ss_pred CCCCCCCCeEEECCCCCEEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--C-CCEEEEEECC-CHHHHHHHH
Confidence 469999999 66789999999999999 999999 789999999999999999999 4 4999999998 677888999
Q ss_pred HhCCC-cccccCCchhHHHHHHhcCCC---------CccEEEEECCCCcEEEc
Q 008336 91 SKMPW-LAVPFSDSETRDKLDELFKVM---------GIPHLVILDENGKVLSD 133 (569)
Q Consensus 91 ~~~~~-~~~~~~~~~~~~~l~~~~~v~---------~~P~~~lid~~G~i~~~ 133 (569)
+++++ .+..+.|.. ...+.+.|++. ..|++||||++|+|+..
T Consensus 129 ~~~~~~~f~~l~D~~-~~~~~~~ygv~~~~~~~~g~~~p~~~lID~~G~I~~~ 180 (200)
T 3zrd_A 129 GAEGLSNVITLSTLR-GADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVIYS 180 (200)
T ss_dssp TTTTCTTEEEEETTS-CTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEE
T ss_pred HHcCCCCceEEecCc-hHHHHHHhCceeecccCCCccccEEEEECCCCeEEEE
Confidence 99888 666666551 24788999986 36999999999999874
No 189
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.71 E-value=1.5e-17 Score=151.39 Aligned_cols=119 Identities=24% Similarity=0.362 Sum_probs=100.9
Q ss_pred ccccCccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHh-hHhhHHHHHHHHHHhcCCC--CEEEEEEeCCC---CHH
Q 008336 13 SLLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGP-CQRFTPILAEVYNELSRQG--DFEVIFVSGDE---DDE 84 (569)
Q Consensus 13 ~~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~-C~~~~p~l~~~~~~~~~~g--~~~vv~v~~d~---~~~ 84 (569)
.++|.++|+| +.+.+| .+++++++|| +||+||++||++ |+.++|.|.++++++++++ ++.|++|++|. +.+
T Consensus 10 ~~~G~~~p~f~l~~~~g-~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~ 88 (172)
T 2k6v_A 10 RLLNPKPVDFALEGPQG-PVRLSQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPE 88 (172)
T ss_dssp EEEEEEECCCEEECSSS-EEEGGGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHH
T ss_pred cccCCCCCCeEEEcCCC-CCcHHHhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHH
Confidence 4679999999 667899 9999999999 999999999997 9999999999999998652 59999999984 578
Q ss_pred HHHHHHHhCCCcccccCCchh-HHHHHHhcCC---------------CCccEEEEECCCCcEEEc
Q 008336 85 AFKGYFSKMPWLAVPFSDSET-RDKLDELFKV---------------MGIPHLVILDENGKVLSD 133 (569)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~v---------------~~~P~~~lid~~G~i~~~ 133 (569)
.+++|+++++..+..+.+... ...+.+.|++ .++|+++||| +|+|+..
T Consensus 89 ~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~ 152 (172)
T 2k6v_A 89 VADRYAKAFHPSFLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLL 152 (172)
T ss_dssp HHHHHHHHHCTTEEEECCCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEE
T ss_pred HHHHHHHHhCCCcEEEeCCHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEE
Confidence 899999999877766666542 2467777764 5789999999 9999874
No 190
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.71 E-value=1.4e-17 Score=152.77 Aligned_cols=134 Identities=13% Similarity=0.206 Sum_probs=106.6
Q ss_pred cCCcccee-cC--CC-Cceeccc-CCCCEE-EEEEecCCChhHHh-hhHHHHHHHHHHhhcCCCeE-EEEEeCCCChhHH
Q 008336 336 SGDLDFVV-GK--NG-GKVPVSD-LAGKTI-LLYFSAHWCPPCRA-FLPKLIDAYKKIKERNESLE-VVFISSDRDQTSF 407 (569)
Q Consensus 336 ~~~~~f~~-~~--~g-~~v~l~~-~~gk~v-ll~F~a~wC~~C~~-~~~~l~~l~~~~~~~~~~~~-vv~is~d~~~~~~ 407 (569)
...|+|.+ +. +| +++++++ ++||++ |++||++|||+|+. ++|.|++++++|+++ ++. |++||.| ++...
T Consensus 30 ~~aPdf~l~~~~~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~--gv~~vv~Is~d-~~~~~ 106 (184)
T 3uma_A 30 DKLPNATFKEKTADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILAR--GVDDIAVVAVN-DLHVM 106 (184)
T ss_dssp CBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTT--TCCEEEEEESS-CHHHH
T ss_pred CCCCCcEeecccCCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHc--CCCEEEEEECC-CHHHH
Confidence 44689988 76 89 9999999 899965 55566999999999 799999999999876 688 9999998 45788
Q ss_pred HHHHhcCCCc-ccccCchhhHHHHHhcCCC-----------CccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHH
Q 008336 408 DEFFKGMPWL-ALPFGDARKASLSRKFKVS-----------GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMK 475 (569)
Q Consensus 408 ~~~~~~~~~~-~~~~~~d~~~~l~~~~~v~-----------~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~ 475 (569)
++|.++++.. .||++.|.+..+++.||+. ..|++|||| +|+|++...+. ..-++.....+
T Consensus 107 ~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~~~g~g~~~~r~tfiId-dG~I~~~~~~~-------~~g~~~~~~~~ 178 (184)
T 3uma_A 107 GAWATHSGGMGKIHFLSDWNAAFTKAIGMEIDLSAGTLGIRSKRYSMLVE-DGVVKALNIEE-------SPGQATASGAA 178 (184)
T ss_dssp HHHHHHHTCTTTSEEEECTTCHHHHHTTCEEEEGGGTCEEEECCEEEEEE-TTEEEEEEECS-------STTCCSTTSHH
T ss_pred HHHHHHhCCCCceEEEEcCchHHHHHcCCceeccccCCcccceeEEEEEC-CCEEEEEEEeC-------CCCCCcCCCHH
Confidence 8999988743 4999999999999999986 358899996 99999986432 22234445555
Q ss_pred HHHHH
Q 008336 476 EIDGQ 480 (569)
Q Consensus 476 ~l~~~ 480 (569)
++.++
T Consensus 179 ~vL~~ 183 (184)
T 3uma_A 179 AMLEL 183 (184)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 55443
No 191
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.71 E-value=4.1e-17 Score=148.54 Aligned_cols=113 Identities=18% Similarity=0.142 Sum_probs=97.5
Q ss_pred cccCccCCc-eecCCCceeecCCCCCc-EEEEEe-cCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHH
Q 008336 14 LLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYF 90 (569)
Q Consensus 14 ~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~ 90 (569)
.+|.++|+| +.+.+|+.+++++++|| ++|+|| ++||++|+.++|.|+++++++ . +++|++|+.| +.+..++|+
T Consensus 22 ~~g~~~P~f~l~~~~G~~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~-~v~vv~Is~d-~~~~~~~~~ 97 (171)
T 2yzh_A 22 KVGDRAPEAVVVTKDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM--E-GVDVTVVSMD-LPFAQKRFC 97 (171)
T ss_dssp CTTSBCCCEEEEETTSCEEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--T-TEEEEEEESS-CHHHHHHHH
T ss_pred CCCCcCCceEEECCCCCEeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--C-CceEEEEeCC-CHHHHHHHH
Confidence 469999999 56789999999999999 999999 899999999999999999998 4 4999999998 577889999
Q ss_pred HhCCC-cccccCC-chhHHHHHHhcCCCC---------ccEEEEECCCCcEEEc
Q 008336 91 SKMPW-LAVPFSD-SETRDKLDELFKVMG---------IPHLVILDENGKVLSD 133 (569)
Q Consensus 91 ~~~~~-~~~~~~~-~~~~~~l~~~~~v~~---------~P~~~lid~~G~i~~~ 133 (569)
++++. .+..+.| .. ..+ +.|++.. +|+++|||++|+|+..
T Consensus 98 ~~~~~~~~~~l~D~~~--~~~-~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~ 148 (171)
T 2yzh_A 98 ESFNIQNVTVASDFRY--RDM-EKYGVLIGEGALKGILARAVFIIDKEGKVAYV 148 (171)
T ss_dssp HHTTCCSSEEEECTTT--CGG-GGGTCBBCSSTTTTSBCCEEEEECTTSBEEEE
T ss_pred HHcCCCCeEEeecCcc--CcH-HHhCCEecccccCCceeeEEEEEcCCCeEEEE
Confidence 99987 5555555 33 357 8999852 6999999999999875
No 192
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.71 E-value=7.2e-17 Score=151.78 Aligned_cols=118 Identities=18% Similarity=0.189 Sum_probs=91.6
Q ss_pred cccCccCCc-eecCC-CceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCC-------CCH
Q 008336 14 LLSSSARDF-LIRSN-GDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD-------EDD 83 (569)
Q Consensus 14 ~~g~~~pdf-~~~~~-g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d-------~~~ 83 (569)
..+.++|+| +.+.+ |+.++|++++|| |||+|||+|||+|+ ++|.|++++++|++++ ++|++|+++ .+.
T Consensus 30 ~~~~~~pdF~l~d~~~G~~v~Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g-~~Vlgvs~d~f~~~e~~~~ 107 (215)
T 2i3y_A 30 DEKGTIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKPYG-LVVLGFPCNQFGKQEPGDN 107 (215)
T ss_dssp CCCCCGGGCEEEBSSSSCEEEGGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGT-EEEEEEECCCSTTCCCSCH
T ss_pred cccCCcCCcEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCC-eEEEEEEccccCcCCCCCH
Confidence 346789999 56788 999999999999 99999999999999 9999999999999876 999999976 256
Q ss_pred HHHHHHHH------hCCCcccccCCch--h--HHH----HHHh-------c--------------CCCCccEEEEECCCC
Q 008336 84 EAFKGYFS------KMPWLAVPFSDSE--T--RDK----LDEL-------F--------------KVMGIPHLVILDENG 128 (569)
Q Consensus 84 ~~~~~~~~------~~~~~~~~~~~~~--~--~~~----l~~~-------~--------------~v~~~P~~~lid~~G 128 (569)
+.+++|++ +++..+..+.+.+ . ... +... + .|...|++||||++|
T Consensus 108 ~~i~~f~~~~~~~~~~~~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G 187 (215)
T 2i3y_A 108 KEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDG 187 (215)
T ss_dssp HHHHHHHHHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTS
T ss_pred HHHHHHHHhccchhccCccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCC
Confidence 78899998 7776655554321 1 011 2111 1 123348999999999
Q ss_pred cEEEc
Q 008336 129 KVLSD 133 (569)
Q Consensus 129 ~i~~~ 133 (569)
+|+.+
T Consensus 188 ~vv~~ 192 (215)
T 2i3y_A 188 IPVMR 192 (215)
T ss_dssp CEEEE
T ss_pred eEEEE
Confidence 99874
No 193
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.70 E-value=1.5e-17 Score=152.02 Aligned_cols=113 Identities=19% Similarity=0.240 Sum_probs=95.8
Q ss_pred CCcccee-cCCCCceecccCCCCEEEEEEecCC-ChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcC
Q 008336 337 GDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHW-CPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGM 414 (569)
Q Consensus 337 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~w-C~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~ 414 (569)
..|+|.+ +.+|+.+++++++||++||+||++| |++|+.++|.|.+++++ . ++.||+|++|. ++..++|++++
T Consensus 23 ~~P~f~l~~~~G~~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~---~v~vv~Is~D~-~~~~~~~~~~~ 96 (175)
T 1xvq_A 23 PAPAFTLTGGDLGVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA--S---GATVLCVSKDL-PFAQKRFCGAE 96 (175)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH--T---TCEEEEEESSC-HHHHTTCC---
T ss_pred cCCCeEEECCCCCEEeHHHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh--c---CCEEEEEECCC-HHHHHHHHHHc
Confidence 3589988 9999999999999999999999999 99999999999999988 2 59999999974 46677888877
Q ss_pred CCcccccCchhhHHHHHhcCCCCc---------cEEEEECCCCcEEEccc
Q 008336 415 PWLALPFGDARKASLSRKFKVSGI---------PMLVAIGPSGRTITKEA 455 (569)
Q Consensus 415 ~~~~~~~~~d~~~~l~~~~~v~~~---------Pt~~lid~~G~i~~~~~ 455 (569)
++..+|++.|....+++.|++... |+++|||++|+|+++..
T Consensus 97 ~~~~~~~l~D~~~~~~~~~gv~~~~~~~~g~~~p~~~lid~~G~I~~~~~ 146 (175)
T 1xvq_A 97 GTENVMPASAFRDSFGEDYGVTIADGPMAGLLARAIVVIGADGNVAYTEL 146 (175)
T ss_dssp ---CEEEEECTTSSHHHHTTCBBCSSTTTTSBCSEEEEECTTSBEEEEEE
T ss_pred CCCCceEeeCCHHHHHHHhCCcccccccCCcccceEEEECCCCeEEEEEE
Confidence 744788888888889999999887 99999999999999853
No 194
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.70 E-value=5e-17 Score=147.59 Aligned_cols=117 Identities=16% Similarity=0.264 Sum_probs=99.9
Q ss_pred cCCcccee--cCCCCceeccc-CCCCEEEEEE-ecCCChhHH-hhhHHHHHHHHHHhhcCCCeEEEE-EeCCCChhHHHH
Q 008336 336 SGDLDFVV--GKNGGKVPVSD-LAGKTILLYF-SAHWCPPCR-AFLPKLIDAYKKIKERNESLEVVF-ISSDRDQTSFDE 409 (569)
Q Consensus 336 ~~~~~f~~--~~~g~~v~l~~-~~gk~vll~F-~a~wC~~C~-~~~~~l~~l~~~~~~~~~~~~vv~-is~d~~~~~~~~ 409 (569)
...|+|.+ +.+|+.++|++ ++||+++|+| |++|||+|+ .++|.|++++++|+++ ++.||+ ||.| +....++
T Consensus 19 ~~aPdf~l~~~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~--gv~vv~~iS~D-~~~~~~~ 95 (173)
T 3mng_A 19 DAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAK--GVQVVACLSVN-DAFVTGE 95 (173)
T ss_dssp CBCCCCEEECSSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTT--TCCEEEEEESS-CHHHHHH
T ss_pred CCCCCeEeeeCCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEEcCC-CHHHHHH
Confidence 44689976 68999999999 6999766655 599999999 5999999999999876 799997 9998 4578889
Q ss_pred HHhcCCCc-ccccCchhhHHHHHhcCCC-------------CccEEEEECCCCcEEEccch
Q 008336 410 FFKGMPWL-ALPFGDARKASLSRKFKVS-------------GIPMLVAIGPSGRTITKEAR 456 (569)
Q Consensus 410 ~~~~~~~~-~~~~~~d~~~~l~~~~~v~-------------~~Pt~~lid~~G~i~~~~~~ 456 (569)
|+++++.. .||++.|.+.++++.||+. ..|++|||| +|+|++....
T Consensus 96 f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~~~~~~g~~~~~r~tfvID-dG~I~~~~v~ 155 (173)
T 3mng_A 96 WGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ-DGIVKALNVE 155 (173)
T ss_dssp HHHHTTCTTTCEEEECTTCHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE-TTEEEEEEEC
T ss_pred HHHHhCCCCceEEEECCChHHHHHhCCCcccccccccCCcceEEEEEEEE-CCEEEEEEEe
Confidence 99988843 4999999999999999986 359999999 9999998643
No 195
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.70 E-value=2.5e-17 Score=159.04 Aligned_cols=118 Identities=15% Similarity=0.160 Sum_probs=102.4
Q ss_pred ccCCcccee----cCCCCceecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHH
Q 008336 335 VSGDLDFVV----GKNGGKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDE 409 (569)
Q Consensus 335 ~~~~~~f~~----~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~ 409 (569)
....|+|.+ +.+|++++|++++||++||+|| ++||++|..++|.|.+++++|+++ +++||+|++|. .....+
T Consensus 65 G~~aPdF~l~~l~d~~G~~vsLsd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~--gv~vv~IS~D~-~~~~~~ 141 (254)
T 3tjj_A 65 SKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI--NTEVVACSVDS-QFTHLA 141 (254)
T ss_dssp TSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTT--TEEEEEEESSC-HHHHHH
T ss_pred CCCCCCcEeeeecCCCCcEEeHHHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHc--CCEEEEEcCCC-HHHHHH
Confidence 345689974 4568899999999999999999 999999999999999999999875 79999999984 467778
Q ss_pred HHhcC------CCcccccCchhhHHHHHhcCCC------CccEEEEECCCCcEEEccc
Q 008336 410 FFKGM------PWLALPFGDARKASLSRKFKVS------GIPMLVAIGPSGRTITKEA 455 (569)
Q Consensus 410 ~~~~~------~~~~~~~~~d~~~~l~~~~~v~------~~Pt~~lid~~G~i~~~~~ 455 (569)
|++.+ ..+.||++.|....+++.|++. .+|++||||++|+|+++..
T Consensus 142 ~~~~~~~~~g~~~~~fp~l~D~~~~va~~ygv~~~~~g~~~p~tflID~~G~I~~~~~ 199 (254)
T 3tjj_A 142 WINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITL 199 (254)
T ss_dssp HHTSCGGGTSCCSCSSCEEECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEE
T ss_pred HHHHHHHhcCCcccccceeeCcHHHHHHHcCCccccCCCccceEEEECCCCeEEEEEe
Confidence 88765 1478899999889999999996 5899999999999999853
No 196
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.70 E-value=2.2e-17 Score=148.93 Aligned_cols=115 Identities=15% Similarity=0.284 Sum_probs=96.2
Q ss_pred ccCccCCceecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCC-----CCHHHHHH
Q 008336 15 LSSSARDFLIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD-----EDDEAFKG 88 (569)
Q Consensus 15 ~g~~~pdf~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d-----~~~~~~~~ 88 (569)
+|.++| -+.+.+|+.+++++++|| +||+||++||++|+.++|.|.+++++++..+ +.|++|+++ .+.+.+++
T Consensus 16 ~~~~~p-~l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~-~~vv~v~~~~~~~~~~~~~~~~ 93 (164)
T 2h30_A 16 VPHTMS-TMKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSS-ANLITVASPGFLHEKKDGEFQK 93 (164)
T ss_dssp HHHHHT-TCEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTT-SEEEEEECTTSTTCCCTTHHHH
T ss_pred cCCcCC-ccCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCC-cEEEEEEcCCCccccCHHHHHH
Confidence 455566 356789999999999999 9999999999999999999999999998775 999999985 35677889
Q ss_pred HHHhCCCccccc-CCchhHHHHHHhcCCCCccEEEEECCCCcEEEc
Q 008336 89 YFSKMPWLAVPF-SDSETRDKLDELFKVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 89 ~~~~~~~~~~~~-~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 133 (569)
|+.++++...++ .+. ...+++.|++.++|+++|+|++|+++..
T Consensus 94 ~~~~~~~~~~~~~~d~--~~~~~~~~~v~~~P~~~lid~~G~i~~~ 137 (164)
T 2h30_A 94 WYAGLNYPKLPVVTDN--GGTIAQNLNISVYPSWALIGKDGDVQRI 137 (164)
T ss_dssp HHTTSCCTTSCEEECT--TCHHHHHTTCCSSSEEEEECTTSCEEEE
T ss_pred HHHhCCCCcceEEEcC--chHHHHHcCCCccceEEEECCCCcEEEE
Confidence 988877763333 332 2478999999999999999999999864
No 197
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.70 E-value=3e-17 Score=149.29 Aligned_cols=116 Identities=13% Similarity=0.268 Sum_probs=99.6
Q ss_pred cCCcccee-cC----CC-----CceecccC-CCC-EEEEEEecCCChhHHhh-hHHHHHHHHHHhhcCCCeE-EEEEeCC
Q 008336 336 SGDLDFVV-GK----NG-----GKVPVSDL-AGK-TILLYFSAHWCPPCRAF-LPKLIDAYKKIKERNESLE-VVFISSD 401 (569)
Q Consensus 336 ~~~~~f~~-~~----~g-----~~v~l~~~-~gk-~vll~F~a~wC~~C~~~-~~~l~~l~~~~~~~~~~~~-vv~is~d 401 (569)
...|+|.+ +. +| +.++++++ +|| +||++||++|||+|+.+ +|.|++++++++++ ++. |++||.|
T Consensus 11 ~~aP~f~l~~~~~~~~G~~~~~~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~--g~~~vv~Is~d 88 (171)
T 2pwj_A 11 SAASNVSLQKARTWDEGVESKFSTTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAK--GVDSVICVAIN 88 (171)
T ss_dssp CCSSSBCCCSCEECCCSSCTTCCCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHT--TCSEEEEEESS
T ss_pred CcCCCeEEecccccccCCccCcceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHC--CCCEEEEEeCC
Confidence 35689987 65 47 89999996 996 67778999999999999 99999999999876 688 9999998
Q ss_pred CChhHHHHHHhcCCC-cccccCchhhHHHHHhcCCCC-----------ccEEEEECCCCcEEEccc
Q 008336 402 RDQTSFDEFFKGMPW-LALPFGDARKASLSRKFKVSG-----------IPMLVAIGPSGRTITKEA 455 (569)
Q Consensus 402 ~~~~~~~~~~~~~~~-~~~~~~~d~~~~l~~~~~v~~-----------~Pt~~lid~~G~i~~~~~ 455 (569)
. ....++|+++++. +.||++.|.+..+++.||+.. .|+.+||| +|+|++.+.
T Consensus 89 ~-~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~~~~~~~~g~~~~~~t~~I~-~G~I~~~~~ 152 (171)
T 2pwj_A 89 D-PYTVNAWAEKIQAKDAIEFYGDFDGSFHKSLELTTDLSAGLLGIRSERWSAYVV-DGKVKALNV 152 (171)
T ss_dssp C-HHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEEECTTTTCCEEECCEEEEEE-TTEEEEEEE
T ss_pred C-HHHHHHHHHHhCCCCceEEEECCccHHHHHhCCccccccccCCcccceeEEEEE-CCEEEEEEe
Confidence 4 5688899999886 579999999999999999863 56888888 999999864
No 198
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.70 E-value=4.4e-17 Score=155.09 Aligned_cols=136 Identities=18% Similarity=0.224 Sum_probs=110.5
Q ss_pred cCCcccee-cCCCCceecccCCCC-EEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHh
Q 008336 336 SGDLDFVV-GKNGGKVPVSDLAGK-TILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFK 412 (569)
Q Consensus 336 ~~~~~f~~-~~~g~~v~l~~~~gk-~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~ 412 (569)
...|+|.+ +.+| ++++++++|| ++||+|| ++||++|..+++.|++++++|+++ +++||+||+|. ....++|++
T Consensus 7 ~~aPdF~l~~~~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~--~v~vigIS~D~-~~~~~~~~~ 82 (233)
T 2v2g_A 7 EVFPNFEADSTIG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKR--GVKLIALSCDN-VADHKEWSE 82 (233)
T ss_dssp CBCCCCEEEETTC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHT--TEEEEEEESSC-HHHHHHHHH
T ss_pred CCCCCcEEecCCC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHc--CCEEEEEcCCC-HHHHHHHHH
Confidence 45689988 8899 9999999998 9999998 999999999999999999999876 79999999995 456667776
Q ss_pred ------cCC-CcccccCchhhHHHHHhcCCC------------CccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHH
Q 008336 413 ------GMP-WLALPFGDARKASLSRKFKVS------------GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEER 473 (569)
Q Consensus 413 ------~~~-~~~~~~~~d~~~~l~~~~~v~------------~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~ 473 (569)
+.+ .+.||++.|....+++.|++. .+|++||||++|+|+....+.. ..+++
T Consensus 83 ~i~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~----------~~gr~ 152 (233)
T 2v2g_A 83 DVKCLSGVKGDMPYPIIADETRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPA----------TTGRN 152 (233)
T ss_dssp HHHHHHTCCSSCSSCEEECTTCHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECT----------TBCCC
T ss_pred HHHHhhCcccCCceEEEECChHHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCC----------CCCCC
Confidence 452 478899999999999999985 5899999999999999853211 11234
Q ss_pred HHHHHHHhhhhh
Q 008336 474 MKEIDGQYNEMA 485 (569)
Q Consensus 474 ~~~l~~~l~~l~ 485 (569)
.+++.+.|+.+.
T Consensus 153 ~~eilr~l~~Lq 164 (233)
T 2v2g_A 153 FSEILRVIDSLQ 164 (233)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 566777776654
No 199
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.69 E-value=1.5e-17 Score=150.77 Aligned_cols=116 Identities=26% Similarity=0.280 Sum_probs=98.5
Q ss_pred ccccCccCCc-eecCCCceeecCCCCCc-EEEEEecCC-CHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHH
Q 008336 13 SLLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASW-CGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGY 89 (569)
Q Consensus 13 ~~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~w-C~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~ 89 (569)
-.+|.++|+| +.+.+|+.+++++++|| ++|+||++| |++|+.++|.|+++++++ . ++.+++|+.| +.+.+++|
T Consensus 18 ~~~G~~~p~f~l~~~~G~~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~--~-~~~vv~is~d-~~~~~~~~ 93 (167)
T 2jsy_A 18 VKVGDQAPDFTVLTNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL--G-DVNVYTISAD-LPFAQARW 93 (167)
T ss_dssp CCTTSCCCCCEEEBTTCCEEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH--S-SCEEEEEECS-SGGGTSCC
T ss_pred cCCCCcCCceEEECCCCCEeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc--C-CCEEEEEECC-CHHHHHHH
Confidence 3579999999 56789999999999999 999999999 999999999999999999 3 4999999998 45667888
Q ss_pred HHhCCC-cccccCCchhHHHHHHhcCCCC------ccEEEEECCCCcEEEc
Q 008336 90 FSKMPW-LAVPFSDSETRDKLDELFKVMG------IPHLVILDENGKVLSD 133 (569)
Q Consensus 90 ~~~~~~-~~~~~~~~~~~~~l~~~~~v~~------~P~~~lid~~G~i~~~ 133 (569)
++++++ .+..+.+. ....+.+.|++.. .|+++|||++|+|+..
T Consensus 94 ~~~~~~~~~~~~~d~-~~~~~~~~~~v~~~~~g~~~p~~~lid~~G~i~~~ 143 (167)
T 2jsy_A 94 CGANGIDKVETLSDH-RDMSFGEAFGVYIKELRLLARSVFVLDENGKVVYA 143 (167)
T ss_dssp GGGSSCTTEEEEEGG-GTCHHHHHTTCBBTTTCSBCCEEEEECTTSCEEEE
T ss_pred HHhcCCCCceEeeCC-chhHHHHHhCCccccCCceeeEEEEEcCCCcEEEE
Confidence 888887 45444441 2246889999987 4999999999999875
No 200
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.69 E-value=3.7e-17 Score=149.44 Aligned_cols=113 Identities=22% Similarity=0.207 Sum_probs=93.3
Q ss_pred cccCccCCc-eecCCCceeecCCCCCc-EEEEEecCC-CHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHH
Q 008336 14 LLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASW-CGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYF 90 (569)
Q Consensus 14 ~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~w-C~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~ 90 (569)
.+|.++|+| +.+.+|+.+++++++|| +||+||++| |++|+.++|.|.+++++ . ++.|++|+.| +.+..++|+
T Consensus 19 ~~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~---~-~v~vv~Is~D-~~~~~~~~~ 93 (175)
T 1xvq_A 19 AVGSPAPAFTLTGGDLGVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA---S-GATVLCVSKD-LPFAQKRFC 93 (175)
T ss_dssp CTTSBCCCCEEECTTSCEEEGGGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH---T-TCEEEEEESS-CHHHHTTCC
T ss_pred CcCCcCCCeEEECCCCCEEeHHHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh---c-CCEEEEEECC-CHHHHHHHH
Confidence 579999999 66789999999999999 999999999 99999999999999988 3 4999999997 466778888
Q ss_pred HhCCC-cccccCCchhHHHHHHhcCCCCc---------cEEEEECCCCcEEEc
Q 008336 91 SKMPW-LAVPFSDSETRDKLDELFKVMGI---------PHLVILDENGKVLSD 133 (569)
Q Consensus 91 ~~~~~-~~~~~~~~~~~~~l~~~~~v~~~---------P~~~lid~~G~i~~~ 133 (569)
+++++ .+..+.+.. ..+.+.|++... |+++|||++|+|+..
T Consensus 94 ~~~~~~~~~~l~D~~--~~~~~~~gv~~~~~~~~g~~~p~~~lid~~G~I~~~ 144 (175)
T 1xvq_A 94 GAEGTENVMPASAFR--DSFGEDYGVTIADGPMAGLLARAIVVIGADGNVAYT 144 (175)
T ss_dssp ------CEEEEECTT--SSHHHHTTCBBCSSTTTTSBCSEEEEECTTSBEEEE
T ss_pred HHcCCCCceEeeCCH--HHHHHHhCCcccccccCCcccceEEEECCCCeEEEE
Confidence 88877 455455544 468899999877 999999999999875
No 201
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=99.69 E-value=9.3e-18 Score=132.46 Aligned_cols=80 Identities=59% Similarity=1.174 Sum_probs=75.1
Q ss_pred CCCCCCCCHHHHHHHHHHhhhhhcCCCcccccccc-cceeeecccCeeeccCCCCCCCceeEEcCCCCCCccccccCCcC
Q 008336 463 GAEAYPFTEERMKEIDGQYNEMAKGWPENVKHALH-EHELVLDRCGVYSCDGCDEEGRVWAFSCDECDFCLHPNCALGED 541 (569)
Q Consensus 463 g~~~~p~~~~~~~~l~~~l~~l~~~~~~~~~~~~~-~~~l~~~~~~~~~c~~C~~~g~~~~~~~~~~~~~~~~~~~~~~~ 541 (569)
|++|||||++.+.+|.+.+.+.-+.+|.+++|..| +|+|.|....+|.|+.|++.+.+|.|+|..|+|+||+.||+...
T Consensus 1 ~~~a~pfte~~~~~~~~~lhe~Ca~lP~~i~Hp~Hp~H~L~L~~~~~~~C~~C~~~~~~~~Y~C~~C~f~lH~~Ca~~p~ 80 (89)
T 1v5n_A 1 GSSGSSGTEERLKEIEAKYDEIAKDWPKKVKHVLHEEHELELTRVQVYTCDKCEEEGTIWSYHCDECDFDLHAKCALNED 80 (89)
T ss_dssp CCCCCCCCSSCCSHHHHHHHHHTSSSCSEECCSTTTTSCEEEECCSSCCCTTTSCCCCSCEEECTTTCCCCCHHHHHCSS
T ss_pred CCcccccCHHHHHHHHHHHhHHHHcCCceecCCCCCCCccEEeeCCCeEeCCCCCcCCCcEEEcCCCCCeEcHHhcCCCC
Confidence 57899999999999999999999999999999999 79999988779999999999999999999999999999998654
Q ss_pred C
Q 008336 542 K 542 (569)
Q Consensus 542 ~ 542 (569)
.
T Consensus 81 ~ 81 (89)
T 1v5n_A 81 T 81 (89)
T ss_dssp C
T ss_pred c
Confidence 4
No 202
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.69 E-value=1.2e-16 Score=154.21 Aligned_cols=116 Identities=18% Similarity=0.231 Sum_probs=98.3
Q ss_pred cccCccCCcee----cCCCceeecCCCCCc-EEEEEe-cCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHH
Q 008336 14 LLSSSARDFLI----RSNGDQVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFK 87 (569)
Q Consensus 14 ~~g~~~pdf~~----~~~g~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~ 87 (569)
.+|.++|+|.+ +.+|+.++|++++|| +||+|| ++||++|+.++|.|.+++++|++.+ ++|++|++| +.+...
T Consensus 63 ~vG~~aPdF~l~~l~d~~G~~vsLsd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~g-v~vv~IS~D-~~~~~~ 140 (254)
T 3tjj_A 63 KISKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSIN-TEVVACSVD-SQFTHL 140 (254)
T ss_dssp CTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTT-EEEEEEESS-CHHHHH
T ss_pred CCCCCCCCcEeeeecCCCCcEEeHHHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcC-CEEEEEcCC-CHHHHH
Confidence 57999999953 236789999999999 999999 9999999999999999999999875 999999998 566778
Q ss_pred HHHHhC-------CCcccccCCchhHHHHHHhcCCC------CccEEEEECCCCcEEEc
Q 008336 88 GYFSKM-------PWLAVPFSDSETRDKLDELFKVM------GIPHLVILDENGKVLSD 133 (569)
Q Consensus 88 ~~~~~~-------~~~~~~~~~~~~~~~l~~~~~v~------~~P~~~lid~~G~i~~~ 133 (569)
+|+++. ++.+..+.|.. ..+++.|++. .+|++||||++|+|+..
T Consensus 141 ~~~~~~~~~~g~~~~~fp~l~D~~--~~va~~ygv~~~~~g~~~p~tflID~~G~I~~~ 197 (254)
T 3tjj_A 141 AWINTPRRQGGLGPIRIPLLSDLT--HQISKDYGVYLEDSGHTLRGLFIIDDKGILRQI 197 (254)
T ss_dssp HHHTSCGGGTSCCSCSSCEEECTT--SHHHHHHTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred HHHHHHHHhcCCcccccceeeCcH--HHHHHHcCCccccCCCccceEEEECCCCeEEEE
Confidence 888765 45555555544 4799999996 58999999999999874
No 203
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.68 E-value=1.1e-16 Score=151.79 Aligned_cols=136 Identities=17% Similarity=0.232 Sum_probs=107.0
Q ss_pred cCCcccee-cCCCCceecccCCCC--EEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHh
Q 008336 336 SGDLDFVV-GKNGGKVPVSDLAGK--TILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFK 412 (569)
Q Consensus 336 ~~~~~f~~-~~~g~~v~l~~~~gk--~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~ 412 (569)
...|+|.+ +.+| ++++++++|| +||++||++||++|..+++.|++++++|+++ +++||+||+|.. ...++|++
T Consensus 9 ~~aP~F~l~~~~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~--~v~vi~IS~D~~-~~~~~~~~ 84 (224)
T 1prx_A 9 DVAPNFEANTTVG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKR--NVKLIALSIDSV-EDHLAWSK 84 (224)
T ss_dssp CBCCCCEEEETTE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTT--TEEEEEEESSCH-HHHHHHHH
T ss_pred CCCCCcEEecCCC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHC--CCEEEEEcCCCH-HHHHHHHH
Confidence 34689988 8899 9999999998 5666678999999999999999999999875 799999999854 45556655
Q ss_pred cC---------CCcccccCchhhHHHHHhcCCC------------CccEEEEECCCCcEEEccchhhHhhcCCCCCCCCH
Q 008336 413 GM---------PWLALPFGDARKASLSRKFKVS------------GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTE 471 (569)
Q Consensus 413 ~~---------~~~~~~~~~d~~~~l~~~~~v~------------~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~ 471 (569)
.. ..+.||++.|....+++.|++. .+|++||||++|+|+....+.. ..+
T Consensus 85 ~i~~~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~----------~~g 154 (224)
T 1prx_A 85 DINAYNSEEPTEKLPFPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPA----------TTG 154 (224)
T ss_dssp HHHHHTTSCCCSCCSSCEEECTTCHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCT----------TBC
T ss_pred HHHHhhCcccccCcCcceeecCchHHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEEEecCC----------CCC
Confidence 30 2378899999889999999984 3799999999999999853211 112
Q ss_pred HHHHHHHHHhhhhh
Q 008336 472 ERMKEIDGQYNEMA 485 (569)
Q Consensus 472 ~~~~~l~~~l~~l~ 485 (569)
++.+++.+.|+.+.
T Consensus 155 r~~~eil~~i~~l~ 168 (224)
T 1prx_A 155 RNFDEILRVVISLQ 168 (224)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 34566777776654
No 204
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.68 E-value=7.1e-17 Score=145.05 Aligned_cols=114 Identities=18% Similarity=0.233 Sum_probs=98.8
Q ss_pred cccCccCCc-eecCCCceeecCCCCCc---EEEEEe-cCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHH
Q 008336 14 LLSSSARDF-LIRSNGDQVKLDSLKGK---IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKG 88 (569)
Q Consensus 14 ~~g~~~pdf-~~~~~g~~v~l~~~~gk---vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~ 88 (569)
.+|.++|+| +.+.+|+.+++++++|| ++|+|| ++||++|+.++|.|.+++++|++++ .|++|++| +.+.+++
T Consensus 8 ~~G~~~P~f~l~~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~--~vv~is~d-~~~~~~~ 84 (159)
T 2a4v_A 8 EIGDPIPDLSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA--AVFGLSAD-SVTSQKK 84 (159)
T ss_dssp CTTCBCCSCEEECTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC--EEEEEESC-CHHHHHH
T ss_pred CCCCCCCCeEEECCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC--cEEEEeCC-CHHHHHH
Confidence 579999999 56789999999999774 788887 9999999999999999999998875 99999998 5778899
Q ss_pred HHHhCCCcccccCCchhHHHHHHhcCCCCcc------EEEEECCCCcEEEc
Q 008336 89 YFSKMPWLAVPFSDSETRDKLDELFKVMGIP------HLVILDENGKVLSD 133 (569)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P------~~~lid~~G~i~~~ 133 (569)
|++++++.+..+.|.. ..+.+.|++...| +++|| ++|+|+..
T Consensus 85 ~~~~~~~~~~~l~D~~--~~~~~~~gv~~~p~~g~~~~~~li-~~G~i~~~ 132 (159)
T 2a4v_A 85 FQSKQNLPYHLLSDPK--REFIGLLGAKKTPLSGSIRSHFIF-VDGKLKFK 132 (159)
T ss_dssp HHHHHTCSSEEEECTT--CHHHHHHTCBSSSSSCBCCEEEEE-ETTEEEEE
T ss_pred HHHHhCCCceEEECCc--cHHHHHhCCcccccCCccceEEEE-cCCEEEEE
Confidence 9999887766566543 4688999999988 89999 99999874
No 205
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.67 E-value=1.8e-16 Score=152.75 Aligned_cols=139 Identities=10% Similarity=0.169 Sum_probs=111.8
Q ss_pred cCCcccee-cC-CCC--ceeccc-CCCCEEEEEEe-cCCChhHH-hhhHHHHHHHHHHhhcCCCe-EEEEEeCCCChhHH
Q 008336 336 SGDLDFVV-GK-NGG--KVPVSD-LAGKTILLYFS-AHWCPPCR-AFLPKLIDAYKKIKERNESL-EVVFISSDRDQTSF 407 (569)
Q Consensus 336 ~~~~~f~~-~~-~g~--~v~l~~-~~gk~vll~F~-a~wC~~C~-~~~~~l~~l~~~~~~~~~~~-~vv~is~d~~~~~~ 407 (569)
...|+|.+ +. +|+ .+++++ ++||++||+|| ++||++|+ .++|.|++++++++++ ++ .|++||.|. ....
T Consensus 7 ~~aP~f~l~~~~~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~--~~~~vv~is~d~-~~~~ 83 (241)
T 1nm3_A 7 KKVPQVTFRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKY--GVDDILVVSVND-TFVM 83 (241)
T ss_dssp SBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHT--TCCEEEEEESSC-HHHH
T ss_pred CCCCCeEEEcccCCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC--CCCEEEEEEcCC-HHHH
Confidence 34689988 64 677 999999 89999999999 99999999 9999999999999876 69 999999984 6788
Q ss_pred HHHHhcCCCcccccCchhhHHHHHhcCCC-----------CccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHH
Q 008336 408 DEFFKGMPWLALPFGDARKASLSRKFKVS-----------GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKE 476 (569)
Q Consensus 408 ~~~~~~~~~~~~~~~~d~~~~l~~~~~v~-----------~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~ 476 (569)
++|.++++...+|++.|.++.+++.||+. ..|+++|| ++|+|++...+.. ...-|+...+.++
T Consensus 84 ~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~t~li-~~G~i~~~~~~~~-----~~~~~~~~~~~~~ 157 (241)
T 1nm3_A 84 NAWKEDEKSENISFIPDGNGEFTEGMGMLVGKEDLGFGKRSWRYSMLV-KNGVVEKMFIEPN-----EPGDPFKVSDADT 157 (241)
T ss_dssp HHHHHHTTCTTSEEEECTTSHHHHHTTCEEECTTTTCCEEECCEEEEE-ETTEEEEEEECCS-----CSSCCCSSSSHHH
T ss_pred HHHHHhcCCCceEEEECCCcHHHHHhCceeecccccCcccceeEEEEE-ECCEEEEEEEecc-----CCCccceecCHHH
Confidence 89999888556999999999999999986 35999999 9999999854321 0001222356666
Q ss_pred HHHHhhh
Q 008336 477 IDGQYNE 483 (569)
Q Consensus 477 l~~~l~~ 483 (569)
+.+.|+.
T Consensus 158 il~~l~~ 164 (241)
T 1nm3_A 158 MLKYLAP 164 (241)
T ss_dssp HHHHHCT
T ss_pred HHHHhhh
Confidence 6666653
No 206
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.67 E-value=9.5e-17 Score=150.26 Aligned_cols=133 Identities=9% Similarity=0.046 Sum_probs=107.4
Q ss_pred cCCcccee-cCCCCceecccCCCCEEEEEEecCC-ChhHH-----hhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHH
Q 008336 336 SGDLDFVV-GKNGGKVPVSDLAGKTILLYFSAHW-CPPCR-----AFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFD 408 (569)
Q Consensus 336 ~~~~~f~~-~~~g~~v~l~~~~gk~vll~F~a~w-C~~C~-----~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~ 408 (569)
...|+|.+ +.+|+.++|++++||++||+||+.| ||+|. .+++.|.++ + .++.||+||.| ++...+
T Consensus 26 ~~APdFtL~d~~G~~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~----~gv~VvgIS~D-s~~~~~ 97 (224)
T 3keb_A 26 DYLPSFMLVDDQKHDAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W----PHLKLIVITVD-SPSSLA 97 (224)
T ss_dssp CBCCCCEEEETTSCEEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C----TTSEEEEEESS-CHHHHH
T ss_pred CCCCCeEEECCCCCEEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c----CCCEEEEEECC-CHHHHH
Confidence 34699988 9999999999999999999999888 99999 888888776 4 25899999998 567888
Q ss_pred HHHhcCCCcccccCchh-hHHHHHhcCCCC---------ccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHH
Q 008336 409 EFFKGMPWLALPFGDAR-KASLSRKFKVSG---------IPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEID 478 (569)
Q Consensus 409 ~~~~~~~~~~~~~~~d~-~~~l~~~~~v~~---------~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~ 478 (569)
+|.++++...||++.|. ...+++.|||.. .|++||||++|+|++...... +....+.+++.
T Consensus 98 ~f~~~~gl~~fplLsD~~~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~---------~~~~pd~~evl 168 (224)
T 3keb_A 98 RARHEHGLPNIALLSTLRGRDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYSERLAN---------TRDFFDFDAIE 168 (224)
T ss_dssp HHHHHHCCTTCEEEESTTCTTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSB---------TTCCCCHHHHH
T ss_pred HHHHHcCCCCceEEEcCCchHHHHHhCCccccccccCCccCEEEEEcCCCEEEEEEecCC---------CCCCCCHHHHH
Confidence 99998885479999998 689999999975 799999999999999864321 12233455555
Q ss_pred HHhhhhh
Q 008336 479 GQYNEMA 485 (569)
Q Consensus 479 ~~l~~l~ 485 (569)
+.|+++.
T Consensus 169 ~~L~~l~ 175 (224)
T 3keb_A 169 KLLQEGE 175 (224)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 6555554
No 207
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.67 E-value=1.4e-16 Score=150.78 Aligned_cols=135 Identities=16% Similarity=0.192 Sum_probs=105.8
Q ss_pred cCCcccee-cC--CCCceecccCCCC--EEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHH
Q 008336 336 SGDLDFVV-GK--NGGKVPVSDLAGK--TILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEF 410 (569)
Q Consensus 336 ~~~~~f~~-~~--~g~~v~l~~~~gk--~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~ 410 (569)
...|+|.+ +. +| ++++++++|| +||++||++||++|..+++.|++++++|+++ +++||+||+|.. ...++|
T Consensus 7 ~~aP~F~l~~~~~~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~--~v~vi~vS~D~~-~~~~~~ 82 (220)
T 1xcc_A 7 ATFPNFTAKASGIDG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKL--NCKLIGFSCNSK-ESHDKW 82 (220)
T ss_dssp CBCCCCEECBTTCSS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTT--TEEEEEEESSCH-HHHHHH
T ss_pred CCCCCcEeecccCCC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCCH-HHHHHH
Confidence 44689988 77 88 9999999998 4555568999999999999999999999875 799999999853 445555
Q ss_pred Hh-------cCCCcccccCchhhHHHHHhcCCC------------CccEEEEECCCCcEEEccchhhHhhcCCCCCCCCH
Q 008336 411 FK-------GMPWLALPFGDARKASLSRKFKVS------------GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTE 471 (569)
Q Consensus 411 ~~-------~~~~~~~~~~~d~~~~l~~~~~v~------------~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~ 471 (569)
.+ +. .+.||++.|....+++.|++. .+|++||||++|+|+....+.. -.+
T Consensus 83 ~~~i~~~~~~~-~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~----------~~g 151 (220)
T 1xcc_A 83 IEDIKYYGKLN-KWEIPIVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPA----------TTG 151 (220)
T ss_dssp HHHHHHHHTCS-CCCCCEEECTTSHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECT----------TBC
T ss_pred HHHHHHHhcCC-CCcceeEECchhHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEEEecCC----------CCC
Confidence 54 33 378899999999999999984 4799999999999999853211 112
Q ss_pred HHHHHHHHHhhhhh
Q 008336 472 ERMKEIDGQYNEMA 485 (569)
Q Consensus 472 ~~~~~l~~~l~~l~ 485 (569)
++.++|.+.|+.+.
T Consensus 152 ~~~~ell~~i~~lq 165 (220)
T 1xcc_A 152 RNAHEILRVLKSLQ 165 (220)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 35566777776654
No 208
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.66 E-value=1.2e-16 Score=145.16 Aligned_cols=116 Identities=16% Similarity=0.267 Sum_probs=93.0
Q ss_pred ccccCccCCcee-cC----CC-----ceeecCCC-CCc--EEEEEecCCCHhhHhh-HHHHHHHHHHhcCCCCEE-EEEE
Q 008336 13 SLLSSSARDFLI-RS----NG-----DQVKLDSL-KGK--IGLYFSASWCGPCQRF-TPILAEVYNELSRQGDFE-VIFV 77 (569)
Q Consensus 13 ~~~g~~~pdf~~-~~----~g-----~~v~l~~~-~gk--vlv~F~a~wC~~C~~~-~p~l~~~~~~~~~~g~~~-vv~v 77 (569)
..+|.++|+|.+ +. +| +.++++++ +|| ||++||++|||+|+.+ +|.|++++++|++++ +. |++|
T Consensus 7 ~~~g~~aP~f~l~~~~~~~~G~~~~~~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g-~~~vv~I 85 (171)
T 2pwj_A 7 TDILSAASNVSLQKARTWDEGVESKFSTTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKG-VDSVICV 85 (171)
T ss_dssp ---CCCSSSBCCCSCEECCCSSCTTCCCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTT-CSEEEEE
T ss_pred ccccCcCCCeEEecccccccCCccCcceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCC-CCEEEEE
Confidence 457889999944 44 47 89999996 996 6778899999999999 999999999998875 88 9999
Q ss_pred eCCCCHHHHHHHHHhCCC--cccccCCchhHHHHHHhcCCCC-----------ccEEEEECCCCcEEEc
Q 008336 78 SGDEDDEAFKGYFSKMPW--LAVPFSDSETRDKLDELFKVMG-----------IPHLVILDENGKVLSD 133 (569)
Q Consensus 78 ~~d~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~v~~-----------~P~~~lid~~G~i~~~ 133 (569)
+.| +.+..++|++++++ .+..+.|.+ ..+++.||+.. .|+.++|| +|+|++.
T Consensus 86 s~d-~~~~~~~~~~~~~~~~~fp~l~D~~--~~~~~~ygv~~~~~~~~~g~~~~~~t~~I~-~G~I~~~ 150 (171)
T 2pwj_A 86 AIN-DPYTVNAWAEKIQAKDAIEFYGDFD--GSFHKSLELTTDLSAGLLGIRSERWSAYVV-DGKVKAL 150 (171)
T ss_dssp ESS-CHHHHHHHHHHTTCTTTSEEEECTT--CHHHHHHTCEEECTTTTCCEEECCEEEEEE-TTEEEEE
T ss_pred eCC-CHHHHHHHHHHhCCCCceEEEECCc--cHHHHHhCCccccccccCCcccceeEEEEE-CCEEEEE
Confidence 998 56788999999986 344445544 46889999853 56888888 9999874
No 209
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.66 E-value=3.8e-16 Score=148.67 Aligned_cols=115 Identities=13% Similarity=0.147 Sum_probs=95.8
Q ss_pred cccCccCCc-eecCCCceeecCCCCCc--EEEEEe-cCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHH
Q 008336 14 LLSSSARDF-LIRSNGDQVKLDSLKGK--IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGY 89 (569)
Q Consensus 14 ~~g~~~pdf-~~~~~g~~v~l~~~~gk--vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~ 89 (569)
.+|+++|+| +.+.+| .+++++++|+ ++|+|| ++|||+|..+++.|++++++|++.+ ++||+|++|. .+..++|
T Consensus 4 ~iG~~aPdF~l~~~~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~-v~vigIS~D~-~~~~~~~ 80 (233)
T 2v2g_A 4 TLGEVFPNFEADSTIG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRG-VKLIALSCDN-VADHKEW 80 (233)
T ss_dssp CTTCBCCCCEEEETTC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTT-EEEEEEESSC-HHHHHHH
T ss_pred CCCCCCCCcEEecCCC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcC-CEEEEEcCCC-HHHHHHH
Confidence 479999999 556789 8999999887 888888 9999999999999999999998875 9999999984 5666777
Q ss_pred HH------hC--CCcccccCCchhHHHHHHhcCCC------------CccEEEEECCCCcEEEc
Q 008336 90 FS------KM--PWLAVPFSDSETRDKLDELFKVM------------GIPHLVILDENGKVLSD 133 (569)
Q Consensus 90 ~~------~~--~~~~~~~~~~~~~~~l~~~~~v~------------~~P~~~lid~~G~i~~~ 133 (569)
++ +. ++.+..+.|.. ..+++.|++. .+|++||||++|+|+..
T Consensus 81 ~~~i~~~~~~~~~~~fpil~D~~--~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~ 142 (233)
T 2v2g_A 81 SEDVKCLSGVKGDMPYPIIADET--RELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLS 142 (233)
T ss_dssp HHHHHHHHTCCSSCSSCEEECTT--CHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEE
T ss_pred HHHHHHhhCcccCCceEEEECCh--HHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEE
Confidence 76 45 55554455543 4689999985 57999999999999874
No 210
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.66 E-value=6.5e-16 Score=158.24 Aligned_cols=189 Identities=18% Similarity=0.210 Sum_probs=128.0
Q ss_pred EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCCCC--
Q 008336 40 IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMG-- 117 (569)
Q Consensus 40 vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~-- 117 (569)
++|.||++||++|.++.|.|.+++++++. .+.++.|+++.... ..+++.||+.+
T Consensus 138 ~~v~F~~~~~~~~~~~~~~~~~~A~~~~~--~i~f~~vd~~~~~~----------------------~~~~~~fgi~~~~ 193 (361)
T 3uem_A 138 HILLFLPKSVSDYDGKLSNFKTAAESFKG--KILFIFIDSDHTDN----------------------QRILEFFGLKKEE 193 (361)
T ss_dssp EEEEECCSSSSSHHHHHHHHHHHHGGGTT--TCEEEEECTTSGGG----------------------HHHHHHTTCCTTT
T ss_pred EEEEEEeCCchhHHHHHHHHHHHHHHccC--ceEEEEecCChHHH----------------------HHHHHHcCCCccC
Confidence 78999999999999999999999999975 47888888773211 36889999988
Q ss_pred ccEEEEECCCCcEEEcCCcceeecccCCCCCccHHHHHHHHHHHHHHHhhcccccccccC--CCceeecCCCceeeecc-
Q 008336 118 IPHLVILDENGKVLSDGGVEIIREYGVEGYPFTVERIKEMKEQEERAKREQSLRSVLTSH--SRDFVISSDGRKISVSD- 194 (569)
Q Consensus 118 ~P~~~lid~~G~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~--~~d~~~~~~~~~~~~~~- 194 (569)
+|++++++.++... .|......++.+.|.++++..........+.+-.... ....+...+++++....
T Consensus 194 ~P~~~~~~~~~~~~---------ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~~~ 264 (361)
T 3uem_A 194 CPAVRLITLEEEMT---------KYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAF 264 (361)
T ss_dssp CSEEEEEECC--CC---------EECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECTTTHHHHHT
T ss_pred CccEEEEEcCCccc---------ccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcccccCCcEEeecCchhhhcc
Confidence 99999997644321 1221223567788888776643211111111110000 11122333444443322
Q ss_pred ccCcEEEEEEecCCcccchhhhHHHHHHHHHHhcCCCceEEEEeeccccHHHHHHHhcCCCcccccCCchhHHHHHhhcc
Q 008336 195 LEGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLARYFE 274 (569)
Q Consensus 195 ~~gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ei~~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~f~ 274 (569)
..++.++++|+++||++|+.+.|.+.++++.++... . ++++.+|.+.. . ++.|+
T Consensus 265 ~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~-~--v~~~~vd~~~~---------------------~--~~~~~ 318 (361)
T 3uem_A 265 DEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHE-N--IVIAKMDSTAN---------------------E--VEAVK 318 (361)
T ss_dssp CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCS-S--EEEEEEETTTC---------------------B--CSSCC
T ss_pred cCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCC-c--EEEEEEECCcc---------------------c--hhhcC
Confidence 368999999999999999999999999999987642 2 55666665431 1 46789
Q ss_pred cCCCceEEEECCC
Q 008336 275 LSTLPTLVIIGPD 287 (569)
Q Consensus 275 v~~~Ptlvi~~~~ 287 (569)
|.++||++++..+
T Consensus 319 v~~~Pt~~~~~~~ 331 (361)
T 3uem_A 319 VHSFPTLKFFPAS 331 (361)
T ss_dssp CCSSSEEEEECSS
T ss_pred CcccCeEEEEECC
Confidence 9999999999655
No 211
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.66 E-value=2.8e-16 Score=145.86 Aligned_cols=139 Identities=19% Similarity=0.198 Sum_probs=112.9
Q ss_pred hccCCcccee----cCCCCceecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHH
Q 008336 334 LVSGDLDFVV----GKNGGKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFD 408 (569)
Q Consensus 334 ~~~~~~~f~~----~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~ 408 (569)
....+|+|.+ +.++++++|++++||++||+|| +.||+.|..+++.|++.+++|++. +++|++||+|.. ...+
T Consensus 25 VG~~APdF~l~a~~d~~~~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~--g~~vigiS~Ds~-~sh~ 101 (216)
T 3sbc_A 25 VQKQAPTFKKTAVVDGVFDEVSLDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQ--GAQVLFASTDSE-YSLL 101 (216)
T ss_dssp TTSBCCCCCEEEEETTEEEEECGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHT--TEEEEEEESSCH-HHHH
T ss_pred cCCcCCCCCCcceECCCCcEEehHHhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccC--CceEEEeecCch-hhHH
Confidence 4456799964 6677899999999999999999 999999999999999999999987 799999999954 5666
Q ss_pred HHHhcC------CCcccccCchhhHHHHHhcCCC------CccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHH
Q 008336 409 EFFKGM------PWLALPFGDARKASLSRKFKVS------GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKE 476 (569)
Q Consensus 409 ~~~~~~------~~~~~~~~~d~~~~l~~~~~v~------~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~ 476 (569)
+|.+.. ..+.||++.|.+.++++.|||- ..+++||||++|+|++...... -.++++++
T Consensus 102 aw~~~~~~~~~~~~l~fpllsD~~~~vak~YGv~~~~~g~~~R~tFiID~~G~Ir~~~v~~~----------~~grn~dE 171 (216)
T 3sbc_A 102 AWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRHITINDL----------PVGRNVDE 171 (216)
T ss_dssp HHHTSCGGGTCCCSCSSCEEECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECT----------TBCCCHHH
T ss_pred HHHHHHHHhCCccCcccceEeCCCCHHHHHcCCeeccCCceeeEEEEECCCCeEEEEEEcCC----------CCCCCHHH
Confidence 666543 2478999999999999999983 4689999999999998743211 23456777
Q ss_pred HHHHhhhhh
Q 008336 477 IDGQYNEMA 485 (569)
Q Consensus 477 l~~~l~~l~ 485 (569)
+++.|+.+.
T Consensus 172 iLr~l~AlQ 180 (216)
T 3sbc_A 172 ALRLVEAFQ 180 (216)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 777777653
No 212
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.66 E-value=8.8e-16 Score=145.66 Aligned_cols=115 Identities=16% Similarity=0.209 Sum_probs=93.3
Q ss_pred cccCccCCc-eecCCCceeecCCCCCc---EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHH
Q 008336 14 LLSSSARDF-LIRSNGDQVKLDSLKGK---IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGY 89 (569)
Q Consensus 14 ~~g~~~pdf-~~~~~g~~v~l~~~~gk---vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~ 89 (569)
.+|+++|+| +.+.+| .+++++++|+ ||++||++|||+|..+++.|++++++|++.+ ++||+|++|. .+..++|
T Consensus 6 ~~G~~aP~F~l~~~~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~-v~vi~IS~D~-~~~~~~~ 82 (224)
T 1prx_A 6 LLGDVAPNFEANTTVG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRN-VKLIALSIDS-VEDHLAW 82 (224)
T ss_dssp CTTCBCCCCEEEETTE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTT-EEEEEEESSC-HHHHHHH
T ss_pred CCcCCCCCcEEecCCC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCC-CEEEEEcCCC-HHHHHHH
Confidence 479999999 556789 9999999886 4455689999999999999999999999875 9999999984 4556667
Q ss_pred HHh----------CCCcccccCCchhHHHHHHhcCCC------------CccEEEEECCCCcEEEc
Q 008336 90 FSK----------MPWLAVPFSDSETRDKLDELFKVM------------GIPHLVILDENGKVLSD 133 (569)
Q Consensus 90 ~~~----------~~~~~~~~~~~~~~~~l~~~~~v~------------~~P~~~lid~~G~i~~~ 133 (569)
+++ .++.+..+.|.. ..+++.|++. .+|++||||++|+|+..
T Consensus 83 ~~~i~~~~~~~~~~~~~fpil~D~~--~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~ 146 (224)
T 1prx_A 83 SKDINAYNSEEPTEKLPFPIIDDRN--RELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLS 146 (224)
T ss_dssp HHHHHHHTTSCCCSCCSSCEEECTT--CHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEE
T ss_pred HHHHHHhhCcccccCcCcceeecCc--hHHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEE
Confidence 665 555554455543 4688999984 47999999999999874
No 213
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.65 E-value=7.2e-16 Score=147.65 Aligned_cols=116 Identities=17% Similarity=0.261 Sum_probs=93.1
Q ss_pred ccccCccCCc-eecCCCceeec-CCC--CCc--EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHH
Q 008336 13 SLLSSSARDF-LIRSNGDQVKL-DSL--KGK--IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAF 86 (569)
Q Consensus 13 ~~~g~~~pdf-~~~~~g~~v~l-~~~--~gk--vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~ 86 (569)
..+|+++|+| +.+.+| .+++ +++ +|| ||++||++||++|..+++.|.+++++|++.+ ++|++||+|. ....
T Consensus 5 ~~iG~~aPdF~l~~~~G-~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~g-v~VI~VS~Ds-~~~~ 81 (249)
T 3a2v_A 5 PLIGERFPEMEVTTDHG-VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLG-VDLIGLSVDS-VFSH 81 (249)
T ss_dssp CCTTSBCCCEEEEETTE-EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTT-EEEEEEESSC-HHHH
T ss_pred CCCCCCCCCeEEEcCCC-CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCC-cEEEEEECCC-HHHH
Confidence 3589999999 446778 7999 999 999 4557899999999999999999999998875 9999999985 3444
Q ss_pred HHHHHh------CCCcccccCCchhHHHHHHhcCCC-------CccEEEEECCCCcEEEc
Q 008336 87 KGYFSK------MPWLAVPFSDSETRDKLDELFKVM-------GIPHLVILDENGKVLSD 133 (569)
Q Consensus 87 ~~~~~~------~~~~~~~~~~~~~~~~l~~~~~v~-------~~P~~~lid~~G~i~~~ 133 (569)
.+|.+. .++.+..+.|.. ..+++.|++. ++|++||||++|+|+..
T Consensus 82 ~~w~~~~~~~~~~~i~fPil~D~~--~~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~ 139 (249)
T 3a2v_A 82 IKWKEWIERHIGVRIPFPIIADPQ--GTVARRLGLLHAESATHTVRGVFIVDARGVIRTM 139 (249)
T ss_dssp HHHHHHHHHHTCCCCCSCEEECTT--SHHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEE
T ss_pred HHHHHHHHHhcCCCCceeEEECCc--hHHHHHhCCccccCCCcccceEEEECCCCeEEEE
Confidence 445442 344444444533 4789999997 89999999999999874
No 214
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.64 E-value=2.3e-16 Score=151.11 Aligned_cols=137 Identities=14% Similarity=0.183 Sum_probs=106.9
Q ss_pred ccCCcccee-cCCCCceec-ccC--CCCE-EEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHH
Q 008336 335 VSGDLDFVV-GKNGGKVPV-SDL--AGKT-ILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDE 409 (569)
Q Consensus 335 ~~~~~~f~~-~~~g~~v~l-~~~--~gk~-vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~ 409 (569)
....|+|.+ +.+| ++++ +++ +||+ ||++||++||++|..+++.|++++++|+++ +++||+||+|.. ....+
T Consensus 8 G~~aPdF~l~~~~G-~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~--gv~VI~VS~Ds~-~~~~~ 83 (249)
T 3a2v_A 8 GERFPEMEVTTDHG-VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRL--GVDLIGLSVDSV-FSHIK 83 (249)
T ss_dssp TSBCCCEEEEETTE-EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHT--TEEEEEEESSCH-HHHHH
T ss_pred CCCCCCeEEEcCCC-CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhC--CcEEEEEECCCH-HHHHH
Confidence 345689988 7788 7999 999 9996 556789999999999999999999999876 699999999854 33444
Q ss_pred HHhc----C-CCcccccCchhhHHHHHhcCCC-------CccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHH
Q 008336 410 FFKG----M-PWLALPFGDARKASLSRKFKVS-------GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEI 477 (569)
Q Consensus 410 ~~~~----~-~~~~~~~~~d~~~~l~~~~~v~-------~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l 477 (569)
|.+. . ..+.||++.|....+++.|++. ++|++||||++|+|+....+.. -.+++.++|
T Consensus 84 w~~~~~~~~~~~i~fPil~D~~~~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~----------~~gr~~~El 153 (249)
T 3a2v_A 84 WKEWIERHIGVRIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPM----------ELGRLVDEI 153 (249)
T ss_dssp HHHHHHHHTCCCCCSCEEECTTSHHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECT----------TBCCCHHHH
T ss_pred HHHHHHHhcCCCCceeEEECCchHHHHHhCCccccCCCcccceEEEECCCCeEEEEEecCC----------cccchhHHH
Confidence 4432 1 1478899999999999999997 8999999999999999853221 112345666
Q ss_pred HHHhhhhh
Q 008336 478 DGQYNEMA 485 (569)
Q Consensus 478 ~~~l~~l~ 485 (569)
.+.|+.+.
T Consensus 154 lr~I~alq 161 (249)
T 3a2v_A 154 LRIVKALK 161 (249)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66666654
No 215
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.64 E-value=9.5e-16 Score=145.01 Aligned_cols=115 Identities=16% Similarity=0.239 Sum_probs=92.3
Q ss_pred cccCccCCce-ecC--CCceeecCCCCCc--EEEE-EecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHH
Q 008336 14 LLSSSARDFL-IRS--NGDQVKLDSLKGK--IGLY-FSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFK 87 (569)
Q Consensus 14 ~~g~~~pdf~-~~~--~g~~v~l~~~~gk--vlv~-F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~ 87 (569)
.+|+++|+|. .+. +| .+++++++|| ++|. ||++|||+|..+++.|++++++|++.+ ++|++|++|. .+..+
T Consensus 4 ~iG~~aP~F~l~~~~~~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~-v~vi~vS~D~-~~~~~ 80 (220)
T 1xcc_A 4 HLGATFPNFTAKASGIDG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLN-CKLIGFSCNS-KESHD 80 (220)
T ss_dssp CTTCBCCCCEECBTTCSS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTT-EEEEEEESSC-HHHHH
T ss_pred CCCCCCCCcEeecccCCC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcC-CEEEEEeCCC-HHHHH
Confidence 4799999994 456 88 8999999987 4444 589999999999999999999999875 9999999984 45556
Q ss_pred HHHH-------hCCCcccccCCchhHHHHHHhcCCC------------CccEEEEECCCCcEEEc
Q 008336 88 GYFS-------KMPWLAVPFSDSETRDKLDELFKVM------------GIPHLVILDENGKVLSD 133 (569)
Q Consensus 88 ~~~~-------~~~~~~~~~~~~~~~~~l~~~~~v~------------~~P~~~lid~~G~i~~~ 133 (569)
+|++ +.++.+..+.|.. ..+++.|++. .+|++||||++|+|+..
T Consensus 81 ~~~~~i~~~~~~~~~~fpil~D~~--~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~ 143 (220)
T 1xcc_A 81 KWIEDIKYYGKLNKWEIPIVCDES--RELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKAT 143 (220)
T ss_dssp HHHHHHHHHHTCSCCCCCEEECTT--SHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEE
T ss_pred HHHHHHHHHhcCCCCcceeEECch--hHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEE
Confidence 6655 3455555455543 4688999983 47999999999999874
No 216
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.63 E-value=8.9e-15 Score=140.74 Aligned_cols=171 Identities=16% Similarity=0.191 Sum_probs=112.2
Q ss_pred EEEEEecCC--CHhhHhhHHHHHHHHHHhcC-CCC--EEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcC
Q 008336 40 IGLYFSASW--CGPCQRFTPILAEVYNELSR-QGD--FEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFK 114 (569)
Q Consensus 40 vlv~F~a~w--C~~C~~~~p~l~~~~~~~~~-~g~--~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 114 (569)
|+|.||++| |++|+.+.|.+.++++.... +|+ +.++.++.+... .+++.|+
T Consensus 28 v~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~------------------------~~~~~~g 83 (243)
T 2hls_A 28 VEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDS------------------------DKFSEFK 83 (243)
T ss_dssp EEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTH------------------------HHHHHTT
T ss_pred EEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCH------------------------HHHHhcC
Confidence 999999999 99999999999999987531 233 888888888664 4889999
Q ss_pred CCCccEEEEECCCCcEEEcCCcceeecccCCCCCccHHHHHHHHHHHHH-HHhhcccccccccCCCceeecCCCceee-e
Q 008336 115 VMGIPHLVILDENGKVLSDGGVEIIREYGVEGYPFTVERIKEMKEQEER-AKREQSLRSVLTSHSRDFVISSDGRKIS-V 192 (569)
Q Consensus 115 v~~~P~~~lid~~G~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~l~~~~~~~~~d~~~~~~~~~~~-~ 192 (569)
|.++|++.++ +| ..... |.. +...+..++..... ......+ +.+... +
T Consensus 84 v~~~Pt~~i~--~g-~~~~~--------G~~----~~~~l~~fv~~~l~~~~~~~~l---------------~~~~~~~~ 133 (243)
T 2hls_A 84 VERVPTVAFL--GG-EVRWT--------GIP----AGEEIRALVEVIMRLSEDESGL---------------EDATKEAL 133 (243)
T ss_dssp CCSSSEEEET--TT-TEEEE--------SCC----CTTHHHHHHHHHHHHHTTCCCC---------------CHHHHHHH
T ss_pred CCcCCEEEEE--CC-ceeEc--------CCC----cHHHHHHHHHHHHhccCCCCCC---------------CHHHHHHH
Confidence 9999999998 35 22211 211 11233333322110 0000000 000000 1
Q ss_pred ccccCcEEEEEEecCCcccchhhhHHHHHHHHHHhcCC-CceEEEEeeccccHHHHHHHhcCCCcccccCCchhHHHHHh
Q 008336 193 SDLEGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKG-ESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLAR 271 (569)
Q Consensus 193 ~~~~gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~-~~~ei~~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~ 271 (569)
..+.++.+++.|+++||++|+.+.|.+.+++..+..++ .++.+..+.++. ...+++
T Consensus 134 ~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~-----------------------~~~~~~ 190 (243)
T 2hls_A 134 KSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYE-----------------------NPDIAD 190 (243)
T ss_dssp HHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTT-----------------------CHHHHH
T ss_pred HHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECcc-----------------------CHHHHH
Confidence 13457888999999999999999999999998874211 234444444433 346788
Q ss_pred hcccCCCceEEEECCCCCc
Q 008336 272 YFELSTLPTLVIIGPDGKT 290 (569)
Q Consensus 272 ~f~v~~~Ptlvi~~~~g~~ 290 (569)
.|+|.++||+++ +|+.
T Consensus 191 ~~~V~~vPt~~i---~G~~ 206 (243)
T 2hls_A 191 KYGVMSVPSIAI---NGYL 206 (243)
T ss_dssp HTTCCSSSEEEE---TTEE
T ss_pred HcCCeeeCeEEE---CCEE
Confidence 999999999988 5654
No 217
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.62 E-value=6.3e-16 Score=144.67 Aligned_cols=112 Identities=13% Similarity=0.092 Sum_probs=94.6
Q ss_pred cccCccCCc-eecCCCceeecCCCCCc-EEEEEecCC-CHhhH-----hhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHH
Q 008336 14 LLSSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASW-CGPCQ-----RFTPILAEVYNELSRQGDFEVIFVSGDEDDEA 85 (569)
Q Consensus 14 ~~g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~w-C~~C~-----~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~ 85 (569)
.+|.++|+| +.+.+|+.++|++++|| ++|+||++| ||+|. .+++.|.++ + .+ +.|++||.| +...
T Consensus 23 ~vG~~APdFtL~d~~G~~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~g-v~VvgIS~D-s~~~ 95 (224)
T 3keb_A 23 RKGDYLPSFMLVDDQKHDAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--PH-LKLIVITVD-SPSS 95 (224)
T ss_dssp CTTCBCCCCEEEETTSCEEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--TT-SEEEEEESS-CHHH
T ss_pred CCCCCCCCeEEECCCCCEEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--CC-CEEEEEECC-CHHH
Confidence 579999999 55789999999999999 999999988 99999 888888877 4 44 899999998 6788
Q ss_pred HHHHHHhCCCc-ccccCCchhHHHHHHhcCCCC---------ccEEEEECCCCcEEEc
Q 008336 86 FKGYFSKMPWL-AVPFSDSETRDKLDELFKVMG---------IPHLVILDENGKVLSD 133 (569)
Q Consensus 86 ~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~v~~---------~P~~~lid~~G~i~~~ 133 (569)
.++|.+++++. +..+.|.. ...+++.||+.. .|++||||++|+|++.
T Consensus 96 ~~~f~~~~gl~~fplLsD~~-~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~ 152 (224)
T 3keb_A 96 LARARHEHGLPNIALLSTLR-GRDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYS 152 (224)
T ss_dssp HHHHHHHHCCTTCEEEESTT-CTTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEE
T ss_pred HHHHHHHcCCCCceEEEcCC-chHHHHHhCCccccccccCCccCEEEEEcCCCEEEEE
Confidence 99999999884 55555542 136889999864 7999999999999975
No 218
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.62 E-value=3.5e-15 Score=138.53 Aligned_cols=117 Identities=21% Similarity=0.265 Sum_probs=95.8
Q ss_pred ccccCccCCcee----cCCCceeecCCCCCc-EEEEEe-cCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHH
Q 008336 13 SLLSSSARDFLI----RSNGDQVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAF 86 (569)
Q Consensus 13 ~~~g~~~pdf~~----~~~g~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~ 86 (569)
..||++||||.+ +.++++++|++++|| ++|+|| +.|||.|..+++.|++.+++|++.+ ++|++||+| +....
T Consensus 23 ~~VG~~APdF~l~a~~d~~~~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g-~~vigiS~D-s~~sh 100 (216)
T 3sbc_A 23 AQVQKQAPTFKKTAVVDGVFDEVSLDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQG-AQVLFASTD-SEYSL 100 (216)
T ss_dssp CCTTSBCCCCCEEEEETTEEEEECGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTT-EEEEEEESS-CHHHH
T ss_pred hhcCCcCCCCCCcceECCCCcEEehHHhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCC-ceEEEeecC-chhhH
Confidence 468999999943 346689999999999 999999 9999999999999999999999886 999999999 56677
Q ss_pred HHHHHhCC-------CcccccCCchhHHHHHHhcCCC------CccEEEEECCCCcEEEc
Q 008336 87 KGYFSKMP-------WLAVPFSDSETRDKLDELFKVM------GIPHLVILDENGKVLSD 133 (569)
Q Consensus 87 ~~~~~~~~-------~~~~~~~~~~~~~~l~~~~~v~------~~P~~~lid~~G~i~~~ 133 (569)
.+|..... ..+..+.|.+ ..+++.||+. ..+.+||||++|+|+..
T Consensus 101 ~aw~~~~~~~~~~~~l~fpllsD~~--~~vak~YGv~~~~~g~~~R~tFiID~~G~Ir~~ 158 (216)
T 3sbc_A 101 LAWTNIPRKEGGLGPINIPLLADTN--HSLSRDYGVLIEEEGVALRGLFIIDPKGVIRHI 158 (216)
T ss_dssp HHHHTSCGGGTCCCSCSSCEEECTT--SHHHHHHTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred HHHHHHHHHhCCccCcccceEeCCC--CHHHHHcCCeeccCCceeeEEEEECCCCeEEEE
Confidence 77776441 2333344444 4799999983 46899999999999873
No 219
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.61 E-value=1.6e-15 Score=125.76 Aligned_cols=71 Identities=18% Similarity=0.518 Sum_probs=62.9
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
.+|+|+|+|||+||+||+.+.|.+.++++.++ ++.++.|++|..+ ++++.|+|
T Consensus 19 ~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~----~~~~~~vd~d~~~-----------------------~l~~~~~V 71 (105)
T 3zzx_A 19 GNKLVVIDFYATWCGPCKMIAPKLEELSQSMS----DVVFLKVDVDECE-----------------------DIAQDNQI 71 (105)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT----TEEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred CCCEEEEEEECCCCCCccCCCcchhhhhhccC----CeEEEEEecccCH-----------------------HHHHHcCC
Confidence 47999999999999999999999999988875 4788888888665 58999999
Q ss_pred CCccEEEEECCCCcEEEcc
Q 008336 436 SGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~ 454 (569)
+++||++++ ++|+++.+.
T Consensus 72 ~~~PT~~~~-~~G~~v~~~ 89 (105)
T 3zzx_A 72 ACMPTFLFM-KNGQKLDSL 89 (105)
T ss_dssp CBSSEEEEE-ETTEEEEEE
T ss_pred CeecEEEEE-ECCEEEEEE
Confidence 999999999 799999874
No 220
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.61 E-value=1.9e-15 Score=140.63 Aligned_cols=139 Identities=18% Similarity=0.219 Sum_probs=112.9
Q ss_pred hccCCccce----e-cCCCCceecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHH
Q 008336 334 LVSGDLDFV----V-GKNGGKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSF 407 (569)
Q Consensus 334 ~~~~~~~f~----~-~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~ 407 (569)
....+|+|. + +.+|++++|++++||+|||+|| +.||+.|..++..|++++++|++. +++|++||+|.. ..-
T Consensus 28 vG~~APdF~~~a~l~d~~g~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~--g~~vigiS~Ds~-~sh 104 (219)
T 3tue_A 28 INSPAPSFEEVALMPNGSFKKISLSSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNEL--NCEVLACSIDSE-YAH 104 (219)
T ss_dssp TTSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTT--TEEEEEEESSCH-HHH
T ss_pred cCCcCCCCcccccccCCCCcEEehHHhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhccC--CcEEEEeeCCch-hhH
Confidence 455679996 5 7889999999999999999999 899999999999999999999977 799999999954 566
Q ss_pred HHHHhcC------CCcccccCchhhHHHHHhcCCC------CccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHH
Q 008336 408 DEFFKGM------PWLALPFGDARKASLSRKFKVS------GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMK 475 (569)
Q Consensus 408 ~~~~~~~------~~~~~~~~~d~~~~l~~~~~v~------~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~ 475 (569)
++|.... ..+.||++.|.++++++.|||- ....+||||++|+|+...... .-.+++++
T Consensus 105 ~~w~~~~~~~~~~~~l~fpllsD~~~~va~~yGv~~~~~g~~~R~tFiIDp~g~Ir~~~~~~----------~~~gr~~~ 174 (219)
T 3tue_A 105 LQWTLQDRKKGGLGTMAIPILADKTKNIARSYGVLEESQGVAYRGLFIIDPHGMLRQITVND----------MPVGRSVE 174 (219)
T ss_dssp HHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEEC----------TTCCCCHH
T ss_pred HHHhhhhHHhcCccccccccccCcccHHHHHcCCcccCCCeeEEEEEEECCCCeEEEEEEec----------CCCCCCHH
Confidence 6666543 2478999999999999999984 246899999999999874211 12345677
Q ss_pred HHHHHhhhhh
Q 008336 476 EIDGQYNEMA 485 (569)
Q Consensus 476 ~l~~~l~~l~ 485 (569)
++++.|+.+.
T Consensus 175 EvLr~l~aLQ 184 (219)
T 3tue_A 175 EVLRLLEAFQ 184 (219)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 7777777653
No 221
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.61 E-value=3e-15 Score=149.62 Aligned_cols=130 Identities=18% Similarity=0.156 Sum_probs=106.3
Q ss_pred CCcccee-cCCCCceecccCCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcC
Q 008336 337 GDLDFVV-GKNGGKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGM 414 (569)
Q Consensus 337 ~~~~f~~-~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~ 414 (569)
..|+|.+ +.+|++++|++++||+|||+|| +.|||.|..+++.|.+ ...++++|++||.| +....++|.+++
T Consensus 3 k~p~F~l~~~~G~~~~Lsd~~Gk~vvl~F~p~~~tp~C~~e~~~~~~------~~~~~~~v~gis~D-~~~~~~~f~~~~ 75 (322)
T 4eo3_A 3 RVKHFELLTDEGKTFTHVDLYGKYTILFFFPKAGTSGSTREAVEFSR------ENFEKAQVVGISRD-SVEALKRFKEKN 75 (322)
T ss_dssp BCCCCEEEETTSCEEEGGGTTTSEEEEEECSSTTSHHHHHHHHHHHH------SCCTTEEEEEEESC-CHHHHHHHHHHH
T ss_pred CCCCcEEECCCcCEEeHHHhCCCeEEEEEECCCCCCCCHHHHHHHHH------HhhCCCEEEEEeCC-CHHHHHHHHHhh
Confidence 4689998 9999999999999999999999 6799999999887753 12346999999998 557788899888
Q ss_pred CCcccccCchhhHHHHHhcCCC----CccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhh
Q 008336 415 PWLALPFGDARKASLSRKFKVS----GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMA 485 (569)
Q Consensus 415 ~~~~~~~~~d~~~~l~~~~~v~----~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~ 485 (569)
+ +.||++.|.++.+++.|||. .+|++||||++|+|++... + --...+.+++++.++++.
T Consensus 76 ~-l~fp~l~D~~~~v~~~ygv~~~~~~~r~tfiId~~G~i~~~~~-------~----v~~~~h~~~~l~~~~~~~ 138 (322)
T 4eo3_A 76 D-LKVTLLSDPEGILHEFFNVLENGKTVRSTFLIDRWGFVRKEWR-------R----VKVEGHVQEVKEALDRLI 138 (322)
T ss_dssp T-CCSEEEECTTCHHHHHTTCEETTEECCEEEEECTTSBEEEEEE-------S----CCSTTHHHHHHHHHHHHH
T ss_pred C-CceEEEEcCchHHHHhcCCCCCCcCccEEEEECCCCEEEEEEe-------C----CCccccHHHHHHHHhhhc
Confidence 7 78999999999999999994 5899999999999987631 1 023456667777766664
No 222
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.61 E-value=8.3e-15 Score=141.34 Aligned_cols=69 Identities=19% Similarity=0.406 Sum_probs=58.5
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCC-CEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQG-DFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFK 114 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g-~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 114 (569)
.++ ++|+|||+||++|+++.|.+.++++++.... .+.++.|+++.+.. ..+++.|+
T Consensus 29 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~----------------------~~l~~~~~ 86 (244)
T 3q6o_A 29 SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETN----------------------SAVCRDFN 86 (244)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTT----------------------HHHHHHTT
T ss_pred CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhh----------------------HHHHHHcC
Confidence 357 9999999999999999999999999998621 59999999964321 36999999
Q ss_pred CCCccEEEEECCC
Q 008336 115 VMGIPHLVILDEN 127 (569)
Q Consensus 115 v~~~P~~~lid~~ 127 (569)
|.++|++++++++
T Consensus 87 v~~~Pt~~~~~~g 99 (244)
T 3q6o_A 87 IPGFPTVRFFXAF 99 (244)
T ss_dssp CCSSSEEEEECTT
T ss_pred CCccCEEEEEeCC
Confidence 9999999999753
No 223
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.59 E-value=3.8e-15 Score=130.71 Aligned_cols=84 Identities=21% Similarity=0.430 Sum_probs=76.1
Q ss_pred ecCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccC
Q 008336 343 VGKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFG 422 (569)
Q Consensus 343 ~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~ 422 (569)
.+.+|....++.++|+++||+||++||++|+.+.|.|.+++++++++ +.++.|++|.+.
T Consensus 37 ~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~------------------ 95 (141)
T 3hxs_A 37 ADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGK---IYIYKVNVDKEP------------------ 95 (141)
T ss_dssp CCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT---CEEEEEETTTCH------------------
T ss_pred hccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCc---eEEEEEECCCCH------------------
Confidence 37788899999999999999999999999999999999999999764 899999988765
Q ss_pred chhhHHHHHhcCCCCccEEEEECCCCcEEE
Q 008336 423 DARKASLSRKFKVSGIPMLVAIGPSGRTIT 452 (569)
Q Consensus 423 ~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~ 452 (569)
.+++.|+|.++|++++++++|+++.
T Consensus 96 -----~~~~~~~v~~~Pt~~~~~~~g~~~~ 120 (141)
T 3hxs_A 96 -----ELARDFGIQSIPTIWFVPMKGEPQV 120 (141)
T ss_dssp -----HHHHHTTCCSSSEEEEECSSSCCEE
T ss_pred -----HHHHHcCCCCcCEEEEEeCCCCEEE
Confidence 4899999999999999999999873
No 224
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.57 E-value=1.5e-14 Score=134.48 Aligned_cols=116 Identities=19% Similarity=0.244 Sum_probs=95.4
Q ss_pred cccCccCCcee-----cCCCceeecCCCCCc-EEEEEe-cCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHH
Q 008336 14 LLSSSARDFLI-----RSNGDQVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAF 86 (569)
Q Consensus 14 ~~g~~~pdf~~-----~~~g~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~ 86 (569)
.||++||||.. +.+|+.++|++++|| ++|+|| +.|||.|..++..|++.+++|++.+ ++|++||+| +....
T Consensus 27 ~vG~~APdF~~~a~l~d~~g~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g-~~vigiS~D-s~~sh 104 (219)
T 3tue_A 27 KINSPAPSFEEVALMPNGSFKKISLSSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELN-CEVLACSID-SEYAH 104 (219)
T ss_dssp CTTSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTT-EEEEEEESS-CHHHH
T ss_pred ccCCcCCCCcccccccCCCCcEEehHHhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCC-cEEEEeeCC-chhhH
Confidence 68999999942 457889999999999 999999 9999999999999999999999886 999999999 56677
Q ss_pred HHHHHhC-------CCcccccCCchhHHHHHHhcCCC------CccEEEEECCCCcEEEc
Q 008336 87 KGYFSKM-------PWLAVPFSDSETRDKLDELFKVM------GIPHLVILDENGKVLSD 133 (569)
Q Consensus 87 ~~~~~~~-------~~~~~~~~~~~~~~~l~~~~~v~------~~P~~~lid~~G~i~~~ 133 (569)
.+|..+. ...+..+.|.+ ..+++.||+. ....+||||++|+|+..
T Consensus 105 ~~w~~~~~~~~~~~~l~fpllsD~~--~~va~~yGv~~~~~g~~~R~tFiIDp~g~Ir~~ 162 (219)
T 3tue_A 105 LQWTLQDRKKGGLGTMAIPILADKT--KNIARSYGVLEESQGVAYRGLFIIDPHGMLRQI 162 (219)
T ss_dssp HHHHHSCGGGTCCCSCSSCEEECTT--SHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred HHHhhhhHHhcCccccccccccCcc--cHHHHHcCCcccCCCeeEEEEEEECCCCeEEEE
Confidence 7787653 23333344444 4799999983 24688999999999863
No 225
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.56 E-value=9.8e-15 Score=125.41 Aligned_cols=107 Identities=14% Similarity=0.211 Sum_probs=79.8
Q ss_pred CCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCch
Q 008336 345 KNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDA 424 (569)
Q Consensus 345 ~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d 424 (569)
.+|........+||+++|+||++||++|+.+.|.|.+++++++. ++.++.|++|.+.
T Consensus 14 ~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~---~v~~~~v~~~~d~-------------------- 70 (126)
T 2l57_A 14 INVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREG---KFNIYYARLEEEK-------------------- 70 (126)
T ss_dssp CSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSS---SCEEEEEETTSSH--------------------
T ss_pred cchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcC---CeEEEEEeCCCCc--------------------
Confidence 33333334555689999999999999999999999999999863 4899999944222
Q ss_pred hhHHHHHhcCCCCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhhcCCC
Q 008336 425 RKASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWP 489 (569)
Q Consensus 425 ~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~~~~~ 489 (569)
..++++.|+|.++||+++++++|+++.+..+. .. .++|.+.|++++...+
T Consensus 71 -~~~~~~~~~v~~~Pt~~~~~~~G~~~~~~~G~-----------~~---~~~l~~~l~~~~~~~~ 120 (126)
T 2l57_A 71 -NIDLAYKYDANIVPTTVFLDKEGNKFYVHQGL-----------MR---KNNIETILNSLGVKEG 120 (126)
T ss_dssp -HHHHHHHTTCCSSSEEEEECTTCCEEEEEESC-----------CC---HHHHHHHHHHHCCCCC
T ss_pred -hHHHHHHcCCcceeEEEEECCCCCEEEEecCC-----------CC---HHHHHHHHHHHhcccc
Confidence 23689999999999999999999998873221 22 2456666776665443
No 226
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.54 E-value=2.1e-14 Score=152.50 Aligned_cols=80 Identities=21% Similarity=0.430 Sum_probs=63.5
Q ss_pred cCCCceeecCCC-CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCC-CCEEEEEEeCCCCHHHHHHHHHhCCCcccccC
Q 008336 25 RSNGDQVKLDSL-KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQ-GDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFS 101 (569)
Q Consensus 25 ~~~g~~v~l~~~-~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~-g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~ 101 (569)
.++++.+...-. .++ ++|+|||+||++|++++|.+.++++++++. ..+.++.|+++.+..
T Consensus 16 ~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~----------------- 78 (519)
T 3t58_A 16 LLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETN----------------- 78 (519)
T ss_dssp EECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGG-----------------
T ss_pred ECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCcccc-----------------
Confidence 344444433222 357 999999999999999999999999999862 259999999975321
Q ss_pred CchhHHHHHHhcCCCCccEEEEECC
Q 008336 102 DSETRDKLDELFKVMGIPHLVILDE 126 (569)
Q Consensus 102 ~~~~~~~l~~~~~v~~~P~~~lid~ 126 (569)
..+++.|+|.++|+++++++
T Consensus 79 -----~~l~~~~~V~~~PTl~~f~~ 98 (519)
T 3t58_A 79 -----SAVCREFNIAGFPTVRFFQA 98 (519)
T ss_dssp -----HHHHHHTTCCSBSEEEEECT
T ss_pred -----HHHHHHcCCcccCEEEEEcC
Confidence 46999999999999999986
No 227
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.54 E-value=6.3e-15 Score=131.46 Aligned_cols=115 Identities=18% Similarity=0.282 Sum_probs=84.0
Q ss_pred cCCCCceecccCCCCEEEEEEe-cCCChhHHhhhHHH---HHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCccc
Q 008336 344 GKNGGKVPVSDLAGKTILLYFS-AHWCPPCRAFLPKL---IDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLAL 419 (569)
Q Consensus 344 ~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l---~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~ 419 (569)
+..++.+.++..+||+++|+|| ++||++|+++.|.| .++.+.+..+ +.++.|+.+.... +.+
T Consensus 34 ~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~---~~~v~vd~~~~~~-----------~~~ 99 (154)
T 2ju5_A 34 ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVH---LHMVEVDFPQKNH-----------QPE 99 (154)
T ss_dssp ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHH---CEEEEEECCSSCC-----------CCH
T ss_pred CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCc---EEEEEecCccccC-----------CCh
Confidence 3345666777778999999999 99999999999999 6776655443 8888888876531 122
Q ss_pred ccCchhhHHHHHhcCCCCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhhc
Q 008336 420 PFGDARKASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAK 486 (569)
Q Consensus 420 ~~~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~~ 486 (569)
+. .+....+++.|+|.++||++|+|++|+++.+. + +.+...+++.+.|+++++
T Consensus 100 ~~-~~~~~~l~~~~~v~~~Pt~~~~d~~G~~~~~~-G------------~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 100 EQ-RQKNQELKAQYKVTGFPELVFIDAEGKQLARM-G------------FEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp HH-HHHHHHHHHHTTCCSSSEEEEECTTCCEEEEE-C------------CCTTCHHHHHHHHHHHHT
T ss_pred hh-HhhHHHHHHHcCCCCCCEEEEEcCCCCEEEEe-c------------CCCCCHHHHHHHHHHHHh
Confidence 21 34567899999999999999999999999873 2 112234556666666654
No 228
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.54 E-value=4.1e-14 Score=124.07 Aligned_cols=83 Identities=25% Similarity=0.451 Sum_probs=74.2
Q ss_pred ecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCC
Q 008336 24 IRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSD 102 (569)
Q Consensus 24 ~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~ 102 (569)
.+.+|..++++.++|+ ++|+||++||++|+.+.|.|.++++++.+ ++.++.|+++.+.
T Consensus 37 ~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~------------------- 95 (141)
T 3hxs_A 37 ADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAG--KIYIYKVNVDKEP------------------- 95 (141)
T ss_dssp CCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT--TCEEEEEETTTCH-------------------
T ss_pred hccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC--ceEEEEEECCCCH-------------------
Confidence 3467888999999999 99999999999999999999999999874 4899999998764
Q ss_pred chhHHHHHHhcCCCCccEEEEECCCCcEEE
Q 008336 103 SETRDKLDELFKVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 103 ~~~~~~l~~~~~v~~~P~~~lid~~G~i~~ 132 (569)
.+++.|+|.++|+++++|++|+++.
T Consensus 96 -----~~~~~~~v~~~Pt~~~~~~~g~~~~ 120 (141)
T 3hxs_A 96 -----ELARDFGIQSIPTIWFVPMKGEPQV 120 (141)
T ss_dssp -----HHHHHTTCCSSSEEEEECSSSCCEE
T ss_pred -----HHHHHcCCCCcCEEEEEeCCCCEEE
Confidence 4889999999999999999998764
No 229
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.53 E-value=5.8e-14 Score=120.96 Aligned_cols=84 Identities=21% Similarity=0.493 Sum_probs=73.0
Q ss_pred cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCc
Q 008336 344 GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGD 423 (569)
Q Consensus 344 ~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~ 423 (569)
..+++.+.....+||+++|+||++||++|+++.|.|.+++++++++ +.++.|++|..+
T Consensus 29 ~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~---v~~~~vd~d~~~------------------- 86 (128)
T 3ul3_B 29 QNGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKR---IYLLKVDLDKNE------------------- 86 (128)
T ss_dssp CCCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG---EEEEEEEGGGCH-------------------
T ss_pred cCCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC---eEEEEEECCCCH-------------------
Confidence 3455566666778999999999999999999999999999999864 899999888664
Q ss_pred hhhHHHHHhcCCCCccEEEEECCCCcEEEcc
Q 008336 424 ARKASLSRKFKVSGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 424 d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~ 454 (569)
.+++.|+|+++||++++ ++|+++.+.
T Consensus 87 ----~l~~~~~v~~~Pt~~~~-~~G~~~~~~ 112 (128)
T 3ul3_B 87 ----SLARKFSVKSLPTIILL-KNKTMLARK 112 (128)
T ss_dssp ----HHHHHTTCCSSSEEEEE-ETTEEEEEE
T ss_pred ----HHHHHcCCCCcCEEEEE-ECCEEEEEe
Confidence 58999999999999999 799998874
No 230
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.52 E-value=1.9e-14 Score=124.98 Aligned_cols=69 Identities=9% Similarity=0.173 Sum_probs=62.6
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008336 357 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 436 (569)
Q Consensus 357 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 436 (569)
+++|||+|||+||+||+.+.|.|.+++++++++ +.|+.|++|..+ +++..|+|+
T Consensus 41 ~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~---v~f~kVDVDe~~-----------------------e~a~~y~V~ 94 (160)
T 2av4_A 41 ERLVCIRFGHDYDPDCMKMDELLYKVADDIKNF---CVIYLVDITEVP-----------------------DFNTMYELY 94 (160)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT---EEEEEEETTTCC-----------------------TTTTTTTCC
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHccCC---cEEEEEECCCCH-----------------------HHHHHcCCC
Confidence 689999999999999999999999999999765 889999999876 489999999
Q ss_pred CccEEEEECCCCcEEE
Q 008336 437 GIPMLVAIGPSGRTIT 452 (569)
Q Consensus 437 ~~Pt~~lid~~G~i~~ 452 (569)
++||++++ ++|+.+.
T Consensus 95 siPT~~fF-k~G~~v~ 109 (160)
T 2av4_A 95 DPVSVMFF-YRNKHMM 109 (160)
T ss_dssp SSEEEEEE-ETTEEEE
T ss_pred CCCEEEEE-ECCEEEE
Confidence 99999999 7888873
No 231
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.51 E-value=5.9e-14 Score=121.73 Aligned_cols=77 Identities=31% Similarity=0.501 Sum_probs=66.4
Q ss_pred CCEEEEEEecCCChhHHhhhHHHH--HHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcC
Q 008336 357 GKTILLYFSAHWCPPCRAFLPKLI--DAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFK 434 (569)
Q Consensus 357 gk~vll~F~a~wC~~C~~~~~~l~--~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~ 434 (569)
||++||+||++||++|+.+.|.|. ++.+.++++ +.++.|+++.. +...++++.|+
T Consensus 29 ~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~---~~~~~vd~~~~--------------------~~~~~l~~~~~ 85 (133)
T 3fk8_A 29 HKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKH---FEVVKIDVGNF--------------------DRNLELSQAYG 85 (133)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHH---CEEEEEECTTT--------------------TSSHHHHHHTT
T ss_pred CCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCC---EEEEEEeCCcc--------------------cchHHHHHHhC
Confidence 899999999999999999999999 999988765 89999998421 11246899999
Q ss_pred C---CCccEEEEECCCCcEEEccch
Q 008336 435 V---SGIPMLVAIGPSGRTITKEAR 456 (569)
Q Consensus 435 v---~~~Pt~~lid~~G~i~~~~~~ 456 (569)
| .++||++++|++|+++.+..+
T Consensus 86 v~~~~~~Pt~~~~d~~G~~~~~~~g 110 (133)
T 3fk8_A 86 DPIQDGIPAVVVVNSDGKVRYTTKG 110 (133)
T ss_dssp CGGGGCSSEEEEECTTSCEEEECCS
T ss_pred CccCCccceEEEECCCCCEEEEecC
Confidence 9 999999999999999988654
No 232
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.51 E-value=1.4e-14 Score=125.95 Aligned_cols=92 Identities=18% Similarity=0.402 Sum_probs=74.8
Q ss_pred CCccce-e-cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHH---HHHHHHHhhcCCCeEEEEEeCCCChhHHHHHH
Q 008336 337 GDLDFV-V-GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKL---IDAYKKIKERNESLEVVFISSDRDQTSFDEFF 411 (569)
Q Consensus 337 ~~~~f~-~-~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l---~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~ 411 (569)
..|+|. + +.++....+++.+||++||+||++||++|+++.|.+ .++++.++ ++.++.|+++...
T Consensus 9 ~~~~f~~~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~----~~~~~~vd~~~~~------- 77 (134)
T 2fwh_A 9 THLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA----DTVLLQANVTAND------- 77 (134)
T ss_dssp -CCCCEECCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT----TSEEEEEECTTCC-------
T ss_pred cCCCcEEecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc----CcEEEEEeCCCCc-------
Confidence 346665 3 555556677777799999999999999999999998 88888775 3889999887542
Q ss_pred hcCCCcccccCchhhHHHHHhcCCCCccEEEEECCCCcEE
Q 008336 412 KGMPWLALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTI 451 (569)
Q Consensus 412 ~~~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~ 451 (569)
+....+++.|+|.++|+++++|++|+++
T Consensus 78 ------------~~~~~l~~~~~v~~~Pt~~~~d~~G~~v 105 (134)
T 2fwh_A 78 ------------AQDVALLKHLNVLGLPTILFFDGQGQEH 105 (134)
T ss_dssp ------------HHHHHHHHHTTCCSSSEEEEECTTSCBC
T ss_pred ------------chHHHHHHHcCCCCCCEEEEECCCCCEe
Confidence 2345789999999999999999999998
No 233
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.50 E-value=1.4e-13 Score=137.52 Aligned_cols=108 Identities=24% Similarity=0.296 Sum_probs=92.0
Q ss_pred CccCCc-eecCCCceeecCCCCCc-EEEEEe-cCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhC
Q 008336 17 SSARDF-LIRSNGDQVKLDSLKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKM 93 (569)
Q Consensus 17 ~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~ 93 (569)
+.+|+| +.+.+|++++|++++|| |+|+|| +.|||.|..+++.|.+. ..+ +++|++||.| +.+..++|.+++
T Consensus 2 ak~p~F~l~~~~G~~~~Lsd~~Gk~vvl~F~p~~~tp~C~~e~~~~~~~----~~~-~~~v~gis~D-~~~~~~~f~~~~ 75 (322)
T 4eo3_A 2 ARVKHFELLTDEGKTFTHVDLYGKYTILFFFPKAGTSGSTREAVEFSRE----NFE-KAQVVGISRD-SVEALKRFKEKN 75 (322)
T ss_dssp CBCCCCEEEETTSCEEEGGGTTTSEEEEEECSSTTSHHHHHHHHHHHHS----CCT-TEEEEEEESC-CHHHHHHHHHHH
T ss_pred CCCCCcEEECCCcCEEeHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHH----hhC-CCEEEEEeCC-CHHHHHHHHHhh
Confidence 468999 66799999999999999 999999 67999999998888642 223 4999999997 678889999999
Q ss_pred CCcccccCCchhHHHHHHhcCCC----CccEEEEECCCCcEEE
Q 008336 94 PWLAVPFSDSETRDKLDELFKVM----GIPHLVILDENGKVLS 132 (569)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~~~v~----~~P~~~lid~~G~i~~ 132 (569)
+..+..+.|.+. .+++.||+. .+|++||||++|+|++
T Consensus 76 ~l~fp~l~D~~~--~v~~~ygv~~~~~~~r~tfiId~~G~i~~ 116 (322)
T 4eo3_A 76 DLKVTLLSDPEG--ILHEFFNVLENGKTVRSTFLIDRWGFVRK 116 (322)
T ss_dssp TCCSEEEECTTC--HHHHHTTCEETTEECCEEEEECTTSBEEE
T ss_pred CCceEEEEcCch--HHHHhcCCCCCCcCccEEEEECCCCEEEE
Confidence 988777777654 799999994 5789999999999986
No 234
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.50 E-value=4.8e-14 Score=116.76 Aligned_cols=71 Identities=28% Similarity=0.593 Sum_probs=62.0
Q ss_pred CCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhc
Q 008336 35 SLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELF 113 (569)
Q Consensus 35 ~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 113 (569)
+..+| ++|+|||+||++|+.+.|.+.++++.+. ++.++.|++|..+ .+++.|
T Consensus 17 ~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~---~~~~~~vd~d~~~------------------------~l~~~~ 69 (105)
T 3zzx_A 17 EAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS---DVVFLKVDVDECE------------------------DIAQDN 69 (105)
T ss_dssp HTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT---TEEEEEEETTTCH------------------------HHHHHT
T ss_pred hcCCCEEEEEEECCCCCCccCCCcchhhhhhccC---CeEEEEEecccCH------------------------HHHHHc
Confidence 34578 9999999999999999999999998875 4889999998764 489999
Q ss_pred CCCCccEEEEECCCCcEEEc
Q 008336 114 KVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 114 ~v~~~P~~~lid~~G~i~~~ 133 (569)
+|+++||++++ ++|+++.+
T Consensus 70 ~V~~~PT~~~~-~~G~~v~~ 88 (105)
T 3zzx_A 70 QIACMPTFLFM-KNGQKLDS 88 (105)
T ss_dssp TCCBSSEEEEE-ETTEEEEE
T ss_pred CCCeecEEEEE-ECCEEEEE
Confidence 99999999988 78988763
No 235
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.49 E-value=2.3e-14 Score=124.64 Aligned_cols=96 Identities=23% Similarity=0.420 Sum_probs=74.4
Q ss_pred ccccCccCCce-ec-CCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHH---HHHHHHhcCCCCEEEEEEeCCCCHHHH
Q 008336 13 SLLSSSARDFL-IR-SNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPIL---AEVYNELSRQGDFEVIFVSGDEDDEAF 86 (569)
Q Consensus 13 ~~~g~~~pdf~-~~-~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l---~~~~~~~~~~g~~~vv~v~~d~~~~~~ 86 (569)
..+|.++|+|. +. .++....+++.+|| +||+|||+||++|+.+.|.+ .++++.++ ++.++.|+++...+
T Consensus 4 ~~~~~~~~~f~~~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~---~~~~~~vd~~~~~~-- 78 (134)
T 2fwh_A 4 TAQTQTHLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA---DTVLLQANVTANDA-- 78 (134)
T ss_dssp ------CCCCEECCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT---TSEEEEEECTTCCH--
T ss_pred ccccccCCCcEEecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc---CcEEEEEeCCCCcc--
Confidence 34678899995 33 35556677777899 99999999999999999999 88888875 38899999875311
Q ss_pred HHHHHhCCCcccccCCchhHHHHHHhcCCCCccEEEEECCCCcEE
Q 008336 87 KGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVL 131 (569)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~ 131 (569)
....+++.|+|.++|+++++|++|+++
T Consensus 79 ------------------~~~~l~~~~~v~~~Pt~~~~d~~G~~v 105 (134)
T 2fwh_A 79 ------------------QDVALLKHLNVLGLPTILFFDGQGQEH 105 (134)
T ss_dssp ------------------HHHHHHHHTTCCSSSEEEEECTTSCBC
T ss_pred ------------------hHHHHHHHcCCCCCCEEEEECCCCCEe
Confidence 224689999999999999999999886
No 236
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.49 E-value=1.3e-13 Score=118.29 Aligned_cols=83 Identities=19% Similarity=0.272 Sum_probs=68.3
Q ss_pred CCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCch
Q 008336 26 SNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSE 104 (569)
Q Consensus 26 ~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~ 104 (569)
.+|........+|| ++|+||++||++|+.+.|.|.+++++++ . ++.++.|+++.+..
T Consensus 14 ~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-~-~v~~~~v~~~~d~~-------------------- 71 (126)
T 2l57_A 14 INVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKERE-G-KFNIYYARLEEEKN-------------------- 71 (126)
T ss_dssp CSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSS-S-SCEEEEEETTSSHH--------------------
T ss_pred cchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhc-C-CeEEEEEeCCCCch--------------------
Confidence 45544446666889 9999999999999999999999999987 3 59999999442221
Q ss_pred hHHHHHHhcCCCCccEEEEECCCCcEEE
Q 008336 105 TRDKLDELFKVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 105 ~~~~l~~~~~v~~~P~~~lid~~G~i~~ 132 (569)
..+++.|+|.++|+++++|++|+++.
T Consensus 72 --~~~~~~~~v~~~Pt~~~~~~~G~~~~ 97 (126)
T 2l57_A 72 --IDLAYKYDANIVPTTVFLDKEGNKFY 97 (126)
T ss_dssp --HHHHHHTTCCSSSEEEEECTTCCEEE
T ss_pred --HHHHHHcCCcceeEEEEECCCCCEEE
Confidence 36889999999999999999999876
No 237
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.49 E-value=9.2e-14 Score=119.69 Aligned_cols=90 Identities=20% Similarity=0.423 Sum_probs=73.4
Q ss_pred cCccCCceecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCC
Q 008336 16 SSSARDFLIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMP 94 (569)
Q Consensus 16 g~~~pdf~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~ 94 (569)
..++|++. ..+++.++....+|| ++|+|||+||++|+++.|.+.++++++++ ++.++.|+++...
T Consensus 21 ~~~~~~~~-~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~--~v~~~~vd~d~~~----------- 86 (128)
T 3ul3_B 21 FKKVPRLQ-QNGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK--RIYLLKVDLDKNE----------- 86 (128)
T ss_dssp -----CCC-CCCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG--GEEEEEEEGGGCH-----------
T ss_pred hccCCccc-cCCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CeEEEEEECCCCH-----------
Confidence 45566664 456777888888999 99999999999999999999999999974 4999999988764
Q ss_pred CcccccCCchhHHHHHHhcCCCCccEEEEECCCCcEEEc
Q 008336 95 WLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 95 ~~~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 133 (569)
.+++.|+|.++|+++++ ++|+++.+
T Consensus 87 -------------~l~~~~~v~~~Pt~~~~-~~G~~~~~ 111 (128)
T 3ul3_B 87 -------------SLARKFSVKSLPTIILL-KNKTMLAR 111 (128)
T ss_dssp -------------HHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred -------------HHHHHcCCCCcCEEEEE-ECCEEEEE
Confidence 48899999999999999 68887753
No 238
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.48 E-value=5e-14 Score=117.70 Aligned_cols=71 Identities=23% Similarity=0.485 Sum_probs=63.2
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
++|+++|+||++||++|+++.|.|.+++++++ ++.++.|++|... .+++.|+|
T Consensus 23 ~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~----~~~~~~vd~~~~~-----------------------~l~~~~~v 75 (109)
T 3f3q_A 23 QDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP----QADFYKLDVDELG-----------------------DVAQKNEV 75 (109)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC----CCEEEEEECCCCH-----------------------HHHHHcCC
Confidence 48999999999999999999999999999885 3788999888664 48999999
Q ss_pred CCccEEEEECCCCcEEEcc
Q 008336 436 SGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~ 454 (569)
+++||+++++ +|+++.+.
T Consensus 76 ~~~Pt~~~~~-~G~~~~~~ 93 (109)
T 3f3q_A 76 SAMPTLLLFK-NGKEVAKV 93 (109)
T ss_dssp CSSSEEEEEE-TTEEEEEE
T ss_pred CccCEEEEEE-CCEEEEEE
Confidence 9999999996 99998873
No 239
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.48 E-value=1.4e-13 Score=120.01 Aligned_cols=70 Identities=24% Similarity=0.542 Sum_probs=63.4
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008336 357 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 436 (569)
Q Consensus 357 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 436 (569)
+|+++|+||++||++|+++.|.|.+++++++++ +.++.|++|.+. ++++.|+|.
T Consensus 38 ~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~---v~~~~vd~~~~~-----------------------~l~~~~~v~ 91 (136)
T 2l5l_A 38 DKPAIVDFYADWCGPCKMVAPILDELAKEYDGQ---IVIYKVDTEKEQ-----------------------ELAGAFGIR 91 (136)
T ss_dssp SSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTCH-----------------------HHHHHTTCC
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC---EEEEEEeCCCCH-----------------------HHHHHcCCC
Confidence 789999999999999999999999999998754 899999988664 488999999
Q ss_pred CccEEEEECCCCcEEE
Q 008336 437 GIPMLVAIGPSGRTIT 452 (569)
Q Consensus 437 ~~Pt~~lid~~G~i~~ 452 (569)
++||++++|++|+++.
T Consensus 92 ~~Pt~~~~~~~G~~~~ 107 (136)
T 2l5l_A 92 SIPSILFIPMEGKPEM 107 (136)
T ss_dssp SSCEEEEECSSSCCEE
T ss_pred CCCEEEEECCCCcEEE
Confidence 9999999999999873
No 240
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.47 E-value=5.7e-14 Score=118.77 Aligned_cols=71 Identities=20% Similarity=0.398 Sum_probs=62.8
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
++|+++|+||++||++|+++.|.|.+++++++ ++.++.|++|..+ ++++.|+|
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~----~v~~~~vd~d~~~-----------------------~l~~~~~v 82 (116)
T 3qfa_C 30 GDKLVVVDFSATWCGPSKMIKPFFHSLSEKYS----NVIFLEVDVDDCQ-----------------------DVASECEV 82 (116)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTCT----TSEEEEEETTTTH-----------------------HHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC----CCEEEEEECCCCH-----------------------HHHHHcCC
Confidence 48999999999999999999999999888874 3888999888664 58999999
Q ss_pred CCccEEEEECCCCcEEEcc
Q 008336 436 SGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~ 454 (569)
.++||++++ ++|+++.+.
T Consensus 83 ~~~Pt~~~~-~~G~~~~~~ 100 (116)
T 3qfa_C 83 KSMPTFQFF-KKGQKVGEF 100 (116)
T ss_dssp CSSSEEEEE-SSSSEEEEE
T ss_pred ccccEEEEE-eCCeEEEEE
Confidence 999999999 899998873
No 241
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.46 E-value=1.6e-13 Score=123.32 Aligned_cols=104 Identities=16% Similarity=0.338 Sum_probs=89.4
Q ss_pred CceecccC-CCCEEE-EEEecCCChhHHh-hhHHHHHHHHHHhhcCCCe-EEEEEeCCCChhHHHHHHhcCCCc-ccccC
Q 008336 348 GKVPVSDL-AGKTIL-LYFSAHWCPPCRA-FLPKLIDAYKKIKERNESL-EVVFISSDRDQTSFDEFFKGMPWL-ALPFG 422 (569)
Q Consensus 348 ~~v~l~~~-~gk~vl-l~F~a~wC~~C~~-~~~~l~~l~~~~~~~~~~~-~vv~is~d~~~~~~~~~~~~~~~~-~~~~~ 422 (569)
++++|+++ +||+++ ++||+.|||.|.. ++|.|.+.+++|+++ ++ +|++||+| ++...++|.++++.. .||++
T Consensus 37 ~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~--g~d~VigIS~D-~~~~~~~f~~~~~l~~~f~lL 113 (176)
T 4f82_A 37 NACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAA--GIDEIWCVSVN-DAFVMGAWGRDLHTAGKVRMM 113 (176)
T ss_dssp EEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHT--TCCEEEEEESS-CHHHHHHHHHHTTCTTTSEEE
T ss_pred eEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhC--CCCEEEEEeCC-CHHHHHHHHHHhCCCCCceEE
Confidence 68899997 998654 5666999999999 999999999999976 68 99999999 567888999888743 49999
Q ss_pred chhhHHHHHhcCCC------C-----ccEEEEECCCCcEEEccc
Q 008336 423 DARKASLSRKFKVS------G-----IPMLVAIGPSGRTITKEA 455 (569)
Q Consensus 423 ~d~~~~l~~~~~v~------~-----~Pt~~lid~~G~i~~~~~ 455 (569)
.|.+.++++.||+. + .|++||| ++|+|++...
T Consensus 114 sD~~~~va~ayGv~~~~~~~G~g~~s~R~tfII-~dG~I~~~~~ 156 (176)
T 4f82_A 114 ADGSAAFTHALGLTQDLSARGMGIRSLRYAMVI-DGGVVKTLAV 156 (176)
T ss_dssp ECTTCHHHHHHTCEEECGGGTCCEEECCEEEEE-ETTEEEEEEE
T ss_pred EcCchHHHHHhCCCccccccCCCcccccEEEEE-cCCEEEEEEE
Confidence 99999999999983 2 4889999 9999999854
No 242
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.45 E-value=1.6e-13 Score=114.25 Aligned_cols=72 Identities=24% Similarity=0.460 Sum_probs=65.1
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
.+++++|+||++||++|+.+.|.|.++++.++++ +.++.|++|..+ .+++.|+|
T Consensus 20 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~-----------------------~~~~~~~i 73 (109)
T 3tco_A 20 NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGK---AVFGRLNVDENQ-----------------------KIADKYSV 73 (109)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---SEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred cCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCC---ceEEEEccccCH-----------------------HHHHhcCc
Confidence 4899999999999999999999999999999764 899999988765 48999999
Q ss_pred CCccEEEEECCCCcEEEcc
Q 008336 436 SGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~ 454 (569)
.++|+++++ ++|+++.+.
T Consensus 74 ~~~Pt~~~~-~~g~~~~~~ 91 (109)
T 3tco_A 74 LNIPTTLIF-VNGQLVDSL 91 (109)
T ss_dssp CSSSEEEEE-ETTEEEEEE
T ss_pred ccCCEEEEE-cCCcEEEee
Confidence 999999999 999998874
No 243
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.45 E-value=3.3e-14 Score=122.14 Aligned_cols=94 Identities=9% Similarity=0.086 Sum_probs=71.1
Q ss_pred CCEEEEEEecCC--ChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcC
Q 008336 357 GKTILLYFSAHW--CPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFK 434 (569)
Q Consensus 357 gk~vll~F~a~w--C~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~ 434 (569)
+++|||+|||+| |++|+.+.|.|.+++++|.++ .+.|+.|++|.++ +++..|+
T Consensus 34 ~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~--~v~~~KVdvDe~~-----------------------~lA~~yg 88 (140)
T 2qgv_A 34 APDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDY--TWQVAIADLEQSE-----------------------AIGDRFG 88 (140)
T ss_dssp CSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTS--CCEEEECCHHHHH-----------------------HHHHHHT
T ss_pred CCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCC--eEEEEEEECCCCH-----------------------HHHHHcC
Confidence 568899999999 999999999999999998642 2778877777554 5999999
Q ss_pred CCCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhhcCCCc
Q 008336 435 VSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWPE 490 (569)
Q Consensus 435 v~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~~~~~~ 490 (569)
|+++||++++ ++|+++.+..|. .+ -++|.+.|+++++..+.
T Consensus 89 V~sIPTlilF-k~G~~v~~~~G~------------~~--k~~l~~~i~~~l~~~~~ 129 (140)
T 2qgv_A 89 AFRFPATLVF-TGGNYRGVLNGI------------HP--WAELINLMRGLVEPQQE 129 (140)
T ss_dssp CCSSSEEEEE-ETTEEEEEEESC------------CC--HHHHHHHHHHHHC----
T ss_pred CccCCEEEEE-ECCEEEEEEecC------------CC--HHHHHHHHHHHhcCCCC
Confidence 9999999999 899999984321 11 13466666666654443
No 244
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.45 E-value=1.3e-13 Score=117.95 Aligned_cols=72 Identities=22% Similarity=0.368 Sum_probs=65.1
Q ss_pred CCEEEEEEecCCC--hhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcC
Q 008336 357 GKTILLYFSAHWC--PPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFK 434 (569)
Q Consensus 357 gk~vll~F~a~wC--~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~ 434 (569)
+++|||+|||+|| +||+.+.|.|.+++++|.++ +.|+.|++|.++ ++++.|+
T Consensus 33 ~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~---v~~~KVdvDe~~-----------------------~la~~yg 86 (137)
T 2qsi_A 33 GKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGR---LVAAEVAAEAER-----------------------GLMARFG 86 (137)
T ss_dssp SSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTT---EEEEEECGGGHH-----------------------HHHHHHT
T ss_pred CCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCC---cEEEEEECCCCH-----------------------HHHHHcC
Confidence 4599999999999 99999999999999999765 899999888665 5999999
Q ss_pred CCCccEEEEECCCCcEEEccc
Q 008336 435 VSGIPMLVAIGPSGRTITKEA 455 (569)
Q Consensus 435 v~~~Pt~~lid~~G~i~~~~~ 455 (569)
|+++||++++ ++|+++.+..
T Consensus 87 V~siPTlilF-kdG~~v~~~v 106 (137)
T 2qsi_A 87 VAVCPSLAVV-QPERTLGVIA 106 (137)
T ss_dssp CCSSSEEEEE-ECCEEEEEEE
T ss_pred CccCCEEEEE-ECCEEEEEEe
Confidence 9999999999 8999999854
No 245
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.45 E-value=3.1e-13 Score=119.56 Aligned_cols=105 Identities=19% Similarity=0.394 Sum_probs=80.8
Q ss_pred cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCc
Q 008336 344 GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGD 423 (569)
Q Consensus 344 ~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~ 423 (569)
..++..+......+++++|+||++||++|+.+.|.|++++++++++ +.++.|++|..+
T Consensus 42 ~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~---~~~~~vd~~~~~------------------- 99 (148)
T 3p2a_A 42 NATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGK---VRFVKVNTEAEP------------------- 99 (148)
T ss_dssp ECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTCH-------------------
T ss_pred ecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCc---eEEEEEECcCCH-------------------
Confidence 4555555443346899999999999999999999999999998754 899999988765
Q ss_pred hhhHHHHHhcCCCCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhhcCCC
Q 008336 424 ARKASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWP 489 (569)
Q Consensus 424 d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~~~~~ 489 (569)
.+++.|+|.++||++++ ++|+++.+..+. .. .++|.+.|++++...|
T Consensus 100 ----~l~~~~~v~~~Pt~~~~-~~G~~~~~~~G~-----------~~---~~~l~~~l~~~l~~~~ 146 (148)
T 3p2a_A 100 ----ALSTRFRIRSIPTIMLY-RNGKMIDMLNGA-----------VP---KAPFDNWLDEQLSRDP 146 (148)
T ss_dssp ----HHHHHTTCCSSSEEEEE-ETTEEEEEESSC-----------CC---HHHHHHHHHHHHHSCC
T ss_pred ----HHHHHCCCCccCEEEEE-ECCeEEEEEeCC-----------CC---HHHHHHHHHHHhcccC
Confidence 48999999999999999 699998863221 22 3456666666665544
No 246
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.45 E-value=4.6e-13 Score=132.73 Aligned_cols=86 Identities=19% Similarity=0.342 Sum_probs=66.5
Q ss_pred CCceecCCCceeecCC-CCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcc
Q 008336 20 RDFLIRSNGDQVKLDS-LKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLA 97 (569)
Q Consensus 20 pdf~~~~~g~~v~l~~-~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~ 97 (569)
+.-.+.++.+.+.-.- -.++ ++|+|||+||++|++++|.|.++++++.. .+.++.|++|.+..
T Consensus 16 ~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~--~~~~~~v~~d~~~~------------- 80 (298)
T 3ed3_A 16 DPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDG--VVQVAAVNCDLNKN------------- 80 (298)
T ss_dssp CTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTSTTT-------------
T ss_pred CCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccC--CcEEEEEEccCccC-------------
Confidence 3335556655443321 2477 99999999999999999999999999964 48899999984321
Q ss_pred cccCCchhHHHHHHhcCCCCccEEEEECCCCcE
Q 008336 98 VPFSDSETRDKLDELFKVMGIPHLVILDENGKV 130 (569)
Q Consensus 98 ~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i 130 (569)
..+++.|+|.++|++++++. |++
T Consensus 81 ---------~~l~~~~~I~~~Pt~~~~~~-g~~ 103 (298)
T 3ed3_A 81 ---------KALCAKYDVNGFPTLMVFRP-PKI 103 (298)
T ss_dssp ---------HHHHHHTTCCBSSEEEEEEC-CCC
T ss_pred ---------HHHHHhCCCCccceEEEEEC-Cce
Confidence 36999999999999999965 543
No 247
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.44 E-value=2.2e-13 Score=122.45 Aligned_cols=116 Identities=13% Similarity=0.176 Sum_probs=94.8
Q ss_pred ccccCccCCceec-C-C-------C--ceeecCCC-CCc--EEEEEecCCCHhhHh-hHHHHHHHHHHhcCCCCE-EEEE
Q 008336 13 SLLSSSARDFLIR-S-N-------G--DQVKLDSL-KGK--IGLYFSASWCGPCQR-FTPILAEVYNELSRQGDF-EVIF 76 (569)
Q Consensus 13 ~~~g~~~pdf~~~-~-~-------g--~~v~l~~~-~gk--vlv~F~a~wC~~C~~-~~p~l~~~~~~~~~~g~~-~vv~ 76 (569)
-.+|+++|+..+. . + | ++++|+++ +|| ||+.||+.|||.|.. ++|.|++.+++|++.| + +|++
T Consensus 10 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g-~d~Vig 88 (176)
T 4f82_A 10 IQVGDALPDAQLFEFIDDAREGCTLGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAG-IDEIWC 88 (176)
T ss_dssp CCTTCBCCCCEEEEEECSCCTTCCSEEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTT-CCEEEE
T ss_pred hhcCCcCCceEEEEecccccccccCCceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCC-CCEEEE
Confidence 3579999998432 2 2 1 68899997 999 455678999999999 9999999999999886 8 9999
Q ss_pred EeCCCCHHHHHHHHHhCCCc--ccccCCchhHHHHHHhcCCC-----------CccEEEEECCCCcEEEc
Q 008336 77 VSGDEDDEAFKGYFSKMPWL--AVPFSDSETRDKLDELFKVM-----------GIPHLVILDENGKVLSD 133 (569)
Q Consensus 77 v~~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~v~-----------~~P~~~lid~~G~i~~~ 133 (569)
||+| +....++|.++.+.. +..+.|.+ ..+++.||+. ..|+++|| ++|+|++.
T Consensus 89 IS~D-~~~~~~~f~~~~~l~~~f~lLsD~~--~~va~ayGv~~~~~~~G~g~~s~R~tfII-~dG~I~~~ 154 (176)
T 4f82_A 89 VSVN-DAFVMGAWGRDLHTAGKVRMMADGS--AAFTHALGLTQDLSARGMGIRSLRYAMVI-DGGVVKTL 154 (176)
T ss_dssp EESS-CHHHHHHHHHHTTCTTTSEEEECTT--CHHHHHHTCEEECGGGTCCEEECCEEEEE-ETTEEEEE
T ss_pred EeCC-CHHHHHHHHHHhCCCCCceEEEcCc--hHHHHHhCCCccccccCCCcccccEEEEE-cCCEEEEE
Confidence 9999 678899999999876 55566654 4789999873 24889999 99999874
No 248
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.44 E-value=8.3e-14 Score=121.77 Aligned_cols=94 Identities=24% Similarity=0.471 Sum_probs=75.9
Q ss_pred CCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcC
Q 008336 355 LAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFK 434 (569)
Q Consensus 355 ~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~ 434 (569)
.+||+++|+||++||++|+.+.|.|++++++++ ++.++.|++|... ++++.|+
T Consensus 44 ~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~----~v~~~~v~~~~~~-----------------------~~~~~~~ 96 (139)
T 3d22_A 44 RDGKIVLANFSARWCGPSRQIAPYYIELSENYP----SLMFLVIDVDELS-----------------------DFSASWE 96 (139)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTSH-----------------------HHHHHTT
T ss_pred hcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC----CCEEEEEeCcccH-----------------------HHHHHcC
Confidence 348999999999999999999999999998874 4899999988664 5889999
Q ss_pred CCCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhhcCCCcc
Q 008336 435 VSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWPEN 491 (569)
Q Consensus 435 v~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~~~~~~~ 491 (569)
|.++||++++ ++|+++.+.. | .. .++|.+.|++++...|.+
T Consensus 97 v~~~Pt~~~~-~~G~~~~~~~-------G-----~~---~~~l~~~l~~~~~~~~~~ 137 (139)
T 3d22_A 97 IKATPTFFFL-RDGQQVDKLV-------G-----AN---KPELHKKITAILDSLPPS 137 (139)
T ss_dssp CCEESEEEEE-ETTEEEEEEE-------S-----CC---HHHHHHHHHHHHHTSCTT
T ss_pred CCcccEEEEE-cCCeEEEEEe-------C-----CC---HHHHHHHHHHHhccCCCC
Confidence 9999999999 8999988732 2 12 255677777777665543
No 249
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.44 E-value=3e-13 Score=113.45 Aligned_cols=72 Identities=26% Similarity=0.541 Sum_probs=65.0
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
.+++++|+||++||++|+.+.|.|.+++++++++ +.++.|++|.+. ++++.|+|
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~---v~~~~vd~~~~~-----------------------~l~~~~~v 69 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDK---LKIVKIDVDENQ-----------------------ETAGKYGV 69 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTT---CEEEEEETTTCC-----------------------SHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC---cEEEEEECCCCH-----------------------HHHHHcCC
Confidence 5899999999999999999999999999998754 899999988664 48899999
Q ss_pred CCccEEEEECCCCcEEEcc
Q 008336 436 SGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~ 454 (569)
.++||++++ ++|+++.+.
T Consensus 70 ~~~Pt~~~~-~~G~~~~~~ 87 (112)
T 2voc_A 70 MSIPTLLVL-KDGEVVETS 87 (112)
T ss_dssp CSBSEEEEE-ETTEEEEEE
T ss_pred CcccEEEEE-eCCEEEEEE
Confidence 999999999 999998874
No 250
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.44 E-value=2.1e-13 Score=112.82 Aligned_cols=72 Identities=25% Similarity=0.556 Sum_probs=64.2
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
.+|+++|+||++||++|+.+.|.|++++++++++ +.++.|++|.++ ++++.|+|
T Consensus 16 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~---v~~~~v~~~~~~-----------------------~~~~~~~v 69 (105)
T 1nsw_A 16 GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADK---VTVAKLNVDENP-----------------------ETTSQFGI 69 (105)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTT---CEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC---cEEEEEECcCCH-----------------------HHHHHcCC
Confidence 4789999999999999999999999999998754 899999988764 48899999
Q ss_pred CCccEEEEECCCCcEEEcc
Q 008336 436 SGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~ 454 (569)
.++||++++ ++|+++.+.
T Consensus 70 ~~~Pt~~~~-~~G~~~~~~ 87 (105)
T 1nsw_A 70 MSIPTLILF-KGGRPVKQL 87 (105)
T ss_dssp CSSSEEEEE-ETTEEEEEE
T ss_pred ccccEEEEE-eCCeEEEEE
Confidence 999999999 899998763
No 251
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.44 E-value=1.1e-13 Score=119.30 Aligned_cols=100 Identities=14% Similarity=0.280 Sum_probs=74.3
Q ss_pred eecccCCCCEEEEEEecCCChhHHhhhHHH---HHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhh
Q 008336 350 VPVSDLAGKTILLYFSAHWCPPCRAFLPKL---IDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARK 426 (569)
Q Consensus 350 v~l~~~~gk~vll~F~a~wC~~C~~~~~~l---~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~ 426 (569)
+.++..+||++||+||++||++|+.+.|.+ .++.+.+... +.++.|+++.+. .
T Consensus 20 ~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~---~~~~~vd~~~~~---------------------~ 75 (130)
T 2kuc_A 20 LKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRH---FVNLKMDMEKGE---------------------G 75 (130)
T ss_dssp HHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHH---SEEEEECSSSTT---------------------H
T ss_pred HHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcC---eEEEEEecCCcc---------------------h
Confidence 444445689999999999999999999998 6666666544 777777766422 2
Q ss_pred HHHHHhcCCCCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhhcC
Q 008336 427 ASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKG 487 (569)
Q Consensus 427 ~~l~~~~~v~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~~~ 487 (569)
..+++.|+|.++|+++++|++|+++.+..+. .. .++|.+.|++++..
T Consensus 76 ~~~~~~~~v~~~Pt~~~~d~~G~~~~~~~G~-----------~~---~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 76 VELRKKYGVHAYPTLLFINSSGEVVYRLVGA-----------ED---APELLKKVKLGVES 122 (130)
T ss_dssp HHHHHHTTCCSSCEEEEECTTSCEEEEEESC-----------CC---HHHHHHHHHHHHSC
T ss_pred HHHHHHcCCCCCCEEEEECCCCcEEEEecCC-----------CC---HHHHHHHHHHHHHh
Confidence 4689999999999999999999998873221 12 24566667766644
No 252
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.43 E-value=2.9e-12 Score=123.39 Aligned_cols=192 Identities=12% Similarity=0.098 Sum_probs=112.3
Q ss_pred cCcEEEEEEecCCcccchhhhHHHHHHHHHHhcCCCceEEEEeeccccHHHHHHHhcCCCcccccCCchhHHHHHhhccc
Q 008336 196 EGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLARYFEL 275 (569)
Q Consensus 196 ~gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ei~~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~f~v 275 (569)
.++.++++|+++||++|+.+.|.+.++++.+.+.+..+.++.++++.+. ...+++.|+|
T Consensus 29 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~---------------------~~~l~~~~~v 87 (244)
T 3q6o_A 29 SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEET---------------------NSAVCRDFNI 87 (244)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTT---------------------THHHHHHTTC
T ss_pred CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchh---------------------hHHHHHHcCC
Confidence 4589999999999999999999999999999764445666666664433 5688999999
Q ss_pred CCCceEEEECCCCCchhhhhHHHHHhhCCCCCCCChHHHHHHHHHHHHHHhhhhhhhhhccCCccceecCCCCce--ecc
Q 008336 276 STLPTLVIIGPDGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGDLDFVVGKNGGKV--PVS 353 (569)
Q Consensus 276 ~~~Ptlvi~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~f~~~~~g~~v--~l~ 353 (569)
.++||+++++.+++.-... .+ .++ ..+.+.+.+++........ .+.. ...|.+... +...+ -+.
T Consensus 88 ~~~Pt~~~~~~g~~~~~g~---~~-~~~----g~~~~~l~~~i~~~l~~~~----~~~p-~~~p~l~~~-~~~~l~~~~~ 153 (244)
T 3q6o_A 88 PGFPTVRFFXAFTXNGSGA---VF-PVA----GADVQTLRERLIDALESHH----DTWP-PACPPLEPA-XLEEIDGFFA 153 (244)
T ss_dssp CSSSEEEEECTTCCSSSCE---EC-CCT----TCCHHHHHHHHHHHHHTCT----TSCC-TTSCCCSCC-CHHHHHTHHH
T ss_pred CccCEEEEEeCCCcCCCCe---eE-ecC----CCCHHHHHHHHHHHHHhcc----ccCC-CCCCCcccc-cHHHHHHHhh
Confidence 9999999998643321000 00 011 1255666665554332111 0000 001111110 00000 001
Q ss_pred cCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhc
Q 008336 354 DLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKF 433 (569)
Q Consensus 354 ~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~ 433 (569)
.-..+++.+.|...-|..++. +...+... ..+.+..+. + ....+++.|
T Consensus 154 ~~~~~~~al~f~~~~~~~~~~-------~~~d~~~~-~~i~v~~~~-~-----------------------~~~~l~~~f 201 (244)
T 3q6o_A 154 RNNEEYLALIFEXGGSYLARE-------VALDLSQH-KGVAVRRVL-N-----------------------TEANVVRKF 201 (244)
T ss_dssp HCCCSEEEEEEECTTCCHHHH-------HHHHTTTC-TTEEEEEEE-T-----------------------TCHHHHHHH
T ss_pred cCCCceEEEEEEECCcchHHH-------HHHHhccC-CceEEEEEe-C-----------------------chHHHHHHc
Confidence 112456666666554432222 22223211 134443332 2 224689999
Q ss_pred CCCCccEEEEECCCCcEEEcc
Q 008336 434 KVSGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 434 ~v~~~Pt~~lid~~G~i~~~~ 454 (569)
+|+++|++++++++|++...+
T Consensus 202 ~v~~~Pslvl~~~~g~~~~~~ 222 (244)
T 3q6o_A 202 GVTDFPSCYLLFRNGSVSRVP 222 (244)
T ss_dssp TCCCSSEEEEEETTSCEEECC
T ss_pred CCCCCCeEEEEeCCCCeEeec
Confidence 999999999999999998875
No 253
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.43 E-value=4.8e-13 Score=111.19 Aligned_cols=72 Identities=28% Similarity=0.582 Sum_probs=64.2
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
.+++++|+||++||++|+.+.|.|.+++++++++ +.++.|++|.++ ++++.|+|
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~v~~~~~~-----------------------~~~~~~~v 72 (108)
T 2trx_A 19 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK---LTVAKLNIDQNP-----------------------GTAPKYGI 72 (108)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---EEEEEEETTTCT-----------------------THHHHTTC
T ss_pred cCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCC---cEEEEEECCCCH-----------------------HHHHHcCC
Confidence 4799999999999999999999999999998754 899999888664 48899999
Q ss_pred CCccEEEEECCCCcEEEcc
Q 008336 436 SGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~ 454 (569)
.++||++++ ++|+++.+.
T Consensus 73 ~~~Pt~~~~-~~G~~~~~~ 90 (108)
T 2trx_A 73 RGIPTLLLF-KNGEVAATK 90 (108)
T ss_dssp CSSSEEEEE-ETTEEEEEE
T ss_pred cccCEEEEE-eCCEEEEEE
Confidence 999999999 899998763
No 254
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.43 E-value=3.7e-13 Score=115.23 Aligned_cols=71 Identities=23% Similarity=0.558 Sum_probs=62.9
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
++++++|+||++||++|+.+.|.|.+++++++ ++.++.|++|... ++++.|+|
T Consensus 37 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~----~v~~~~vd~d~~~-----------------------~l~~~~~v 89 (124)
T 1xfl_A 37 SKTLVVVDFTASWCGPCRFIAPFFADLAKKLP----NVLFLKVDTDELK-----------------------SVASDWAI 89 (124)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS----SEEEEEEETTTSH-----------------------HHHHHTTC
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC----CcEEEEEECccCH-----------------------HHHHHcCC
Confidence 48999999999999999999999999988875 4889999888654 58899999
Q ss_pred CCccEEEEECCCCcEEEcc
Q 008336 436 SGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~ 454 (569)
.++||++++ ++|+++.+.
T Consensus 90 ~~~Pt~~~~-~~G~~~~~~ 107 (124)
T 1xfl_A 90 QAMPTFMFL-KEGKILDKV 107 (124)
T ss_dssp CSSSEEEEE-ETTEEEEEE
T ss_pred CccCEEEEE-ECCEEEEEE
Confidence 999999888 899998873
No 255
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.43 E-value=1e-13 Score=122.19 Aligned_cols=104 Identities=9% Similarity=0.105 Sum_probs=76.9
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHH--HHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhc
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYK--KIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKF 433 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~--~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~ 433 (569)
.||+|||+|||+||++|+.+.|.+.+..+ .+.. ..++.|++|.+.. +++..|
T Consensus 43 ~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~----~~fv~V~vD~e~~----------------------~~~~~~ 96 (151)
T 3ph9_A 43 SKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ----NKFIMLNLMHETT----------------------DKNLSP 96 (151)
T ss_dssp HTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH----HTCEEEEESSCCS----------------------CGGGCT
T ss_pred cCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh----cCeEEEEecCCch----------------------hhHhhc
Confidence 38999999999999999999999876422 2222 2356666663321 235678
Q ss_pred CCCCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhhcCCC
Q 008336 434 KVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWP 489 (569)
Q Consensus 434 ~v~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~~~~~ 489 (569)
+++++||+++++++|+++.+..| .++...|++...+.+++.+.+++.++...
T Consensus 97 ~v~~~PT~~f~~~~G~~v~~~~G----~~~~~~~~~~~~~~~~ll~~~~~al~~~~ 148 (151)
T 3ph9_A 97 DGQYVPRIMFVDPSLTVRADIAG----RYSNRLYTYEPRDLPLLIENMKKALRLIQ 148 (151)
T ss_dssp TCCCSSEEEEECTTSCBCTTCCC----SCTTSTTCCCGGGHHHHHHHHHHHHSCCC
T ss_pred CCCCCCEEEEECCCCCEEEEEeC----CcCCcccccchhhHHHHHHHHHHHHHHHh
Confidence 99999999999999999987432 33455677888888889998888776543
No 256
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.43 E-value=3e-13 Score=113.21 Aligned_cols=74 Identities=14% Similarity=0.380 Sum_probs=61.6
Q ss_pred cCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhc
Q 008336 354 DLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKF 433 (569)
Q Consensus 354 ~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~ 433 (569)
+.++++++|+||++||++|+.+.|.|.+++++++ ++.++.|+++.. ...+++.|
T Consensus 21 ~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~----~v~~~~vd~~~~----------------------~~~~~~~~ 74 (111)
T 2pu9_C 21 AAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL----DVIFLKLDCNQE----------------------NKTLAKEL 74 (111)
T ss_dssp TCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEECSST----------------------THHHHHHH
T ss_pred hcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC----CeEEEEEecCcc----------------------hHHHHHHc
Confidence 3358999999999999999999999999988875 378888888732 13588999
Q ss_pred CCCCccEEEEECCCCcEEEcc
Q 008336 434 KVSGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 434 ~v~~~Pt~~lid~~G~i~~~~ 454 (569)
+|+++||++++ ++|+++.+.
T Consensus 75 ~v~~~Pt~~~~-~~G~~~~~~ 94 (111)
T 2pu9_C 75 GIRVVPTFKIL-KENSVVGEV 94 (111)
T ss_dssp CCSBSSEEEEE-SSSSEEEEE
T ss_pred CCCeeeEEEEE-eCCcEEEEE
Confidence 99999996555 899998763
No 257
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.43 E-value=1e-13 Score=123.60 Aligned_cols=102 Identities=23% Similarity=0.475 Sum_probs=77.8
Q ss_pred ccCccCCceecCCCceeecCCCCCc-EEEEEe-cCCCHhhHhhHHHH---HHHHHHhcCCCCEEEEEEeCCCCHHHHHHH
Q 008336 15 LSSSARDFLIRSNGDQVKLDSLKGK-IGLYFS-ASWCGPCQRFTPIL---AEVYNELSRQGDFEVIFVSGDEDDEAFKGY 89 (569)
Q Consensus 15 ~g~~~pdf~~~~~g~~v~l~~~~gk-vlv~F~-a~wC~~C~~~~p~l---~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~ 89 (569)
++.+.++| +..++.++++..+|| ++|+|| |+||++|+.++|.+ .++.+.+.. ++.++.|+++....
T Consensus 26 ~~~~~~~~--~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~--~~~~v~vd~~~~~~----- 96 (154)
T 2ju5_A 26 IAAANLQW--ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV--HLHMVEVDFPQKNH----- 96 (154)
T ss_dssp SCCCCCCE--ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH--HCEEEEEECCSSCC-----
T ss_pred cccCCCCC--CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC--cEEEEEecCccccC-----
Confidence 45566666 445777888888999 999999 99999999999999 777665532 48899998886530
Q ss_pred HHhCCCcccccCCchhHHHHHHhcCCCCccEEEEECCCCcEEEc
Q 008336 90 FSKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 133 (569)
+ ++...+....+++.|+|.++|+++++|++|+++.+
T Consensus 97 -----~---~~~~~~~~~~l~~~~~v~~~Pt~~~~d~~G~~~~~ 132 (154)
T 2ju5_A 97 -----Q---PEEQRQKNQELKAQYKVTGFPELVFIDAEGKQLAR 132 (154)
T ss_dssp -----C---CHHHHHHHHHHHHHTTCCSSSEEEEECTTCCEEEE
T ss_pred -----C---ChhhHhhHHHHHHHcCCCCCCEEEEEcCCCCEEEE
Confidence 1 11112233578999999999999999999999874
No 258
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.43 E-value=5.2e-13 Score=110.47 Aligned_cols=72 Identities=24% Similarity=0.463 Sum_probs=64.8
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
.+++++|+||++||++|+.+.|.|.+++++++++ +.++.|++|.++ ++++.|+|
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~-----------------------~~~~~~~v 71 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEGK---ADILKLDVDENP-----------------------STAAKYEV 71 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC---cEEEEEECCcCH-----------------------HHHHhCCC
Confidence 5899999999999999999999999999999764 899999998775 48899999
Q ss_pred CCccEEEEECCCCcEEEcc
Q 008336 436 SGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~ 454 (569)
+++||++++ ++|+++.+.
T Consensus 72 ~~~Pt~~~~-~~G~~~~~~ 89 (106)
T 3die_A 72 MSIPTLIVF-KDGQPVDKV 89 (106)
T ss_dssp CSBSEEEEE-ETTEEEEEE
T ss_pred cccCEEEEE-eCCeEEEEE
Confidence 999999999 599988863
No 259
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.43 E-value=3.3e-13 Score=113.11 Aligned_cols=73 Identities=23% Similarity=0.538 Sum_probs=61.8
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
.+++++|+||++||++|+.+.|.|.+++++++.. ++.++.|++|..+ ++++.|+|
T Consensus 20 ~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~-----------------------~~~~~~~v 74 (112)
T 3d6i_A 20 GDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNS--NVSFLSIDADENS-----------------------EISELFEI 74 (112)
T ss_dssp TTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGT--TSEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCC--CEEEEEEecccCH-----------------------HHHHHcCC
Confidence 3799999999999999999999999999887433 5899999988764 48899999
Q ss_pred CCccEEEEECCCCcEEEcc
Q 008336 436 SGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~ 454 (569)
+++||++++ ++|+++.+.
T Consensus 75 ~~~Pt~~~~-~~G~~~~~~ 92 (112)
T 3d6i_A 75 SAVPYFIII-HKGTILKEL 92 (112)
T ss_dssp CSSSEEEEE-ETTEEEEEE
T ss_pred CcccEEEEE-ECCEEEEEe
Confidence 999999999 799998873
No 260
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.42 E-value=9.2e-13 Score=113.19 Aligned_cols=83 Identities=12% Similarity=0.202 Sum_probs=66.4
Q ss_pred eecCCCceeecCCC-CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcC---CCCEEEEEEeCCCCHHHHHHHHHhCCCcc
Q 008336 23 LIRSNGDQVKLDSL-KGK-IGLYFSASWCGPCQRFTPILAEVYNELSR---QGDFEVIFVSGDEDDEAFKGYFSKMPWLA 97 (569)
Q Consensus 23 ~~~~~g~~v~l~~~-~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~---~g~~~vv~v~~d~~~~~~~~~~~~~~~~~ 97 (569)
+..++++.+...-. .++ ++|+|||+||++|+.+.|.+.++++.+.. .+++.++.|+++...
T Consensus 17 v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~-------------- 82 (127)
T 3h79_A 17 VVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYP-------------- 82 (127)
T ss_dssp CEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCH--------------
T ss_pred eEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccH--------------
Confidence 44556665543332 478 99999999999999999999999998752 236999999998764
Q ss_pred cccCCchhHHHHHHhcCCCCccEEEEECCCCc
Q 008336 98 VPFSDSETRDKLDELFKVMGIPHLVILDENGK 129 (569)
Q Consensus 98 ~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~ 129 (569)
.+++.|+|.++|++++++++++
T Consensus 83 ----------~l~~~~~v~~~Pt~~~~~~g~~ 104 (127)
T 3h79_A 83 ----------DVIERMRVSGFPTMRYYTRIDK 104 (127)
T ss_dssp ----------HHHHHTTCCSSSEEEEECSSCS
T ss_pred ----------hHHHhcCCccCCEEEEEeCCCC
Confidence 4899999999999999976654
No 261
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.42 E-value=7.4e-13 Score=115.76 Aligned_cols=84 Identities=27% Similarity=0.500 Sum_probs=66.6
Q ss_pred cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCc
Q 008336 344 GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGD 423 (569)
Q Consensus 344 ~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~ 423 (569)
..++..+...-..+|++||+||++||++|+++.|.|.+++++++++...+.++.|+++.+.
T Consensus 21 ~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~------------------- 81 (140)
T 2dj1_A 21 VLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSAS------------------- 81 (140)
T ss_dssp ECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCH-------------------
T ss_pred EcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccH-------------------
Confidence 4445544433335899999999999999999999999999999865334777777766553
Q ss_pred hhhHHHHHhcCCCCccEEEEECCCCcEE
Q 008336 424 ARKASLSRKFKVSGIPMLVAIGPSGRTI 451 (569)
Q Consensus 424 d~~~~l~~~~~v~~~Pt~~lid~~G~i~ 451 (569)
.+++.|+|.++||++++ ++|++.
T Consensus 82 ----~~~~~~~v~~~Pt~~~~-~~G~~~ 104 (140)
T 2dj1_A 82 ----MLASKFDVSGYPTIKIL-KKGQAV 104 (140)
T ss_dssp ----HHHHHTTCCSSSEEEEE-ETTEEE
T ss_pred ----HHHHHCCCCccCeEEEE-ECCcEE
Confidence 58999999999999999 789843
No 262
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.42 E-value=1.5e-13 Score=123.70 Aligned_cols=76 Identities=21% Similarity=0.332 Sum_probs=63.3
Q ss_pred cccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHH
Q 008336 352 VSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSR 431 (569)
Q Consensus 352 l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~ 431 (569)
+++++|++++|+|||+|||||+.++|.|+++++.++ ++.++.|++|.++ ++++
T Consensus 49 l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~----~v~~~~v~~d~~~-----------------------~~~~ 101 (167)
T 1z6n_A 49 LQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP----NIELAIISKGRAE-----------------------DDLR 101 (167)
T ss_dssp HHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT----TEEEEEECHHHHH-----------------------HHTT
T ss_pred HHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC----CcEEEEEECCCCH-----------------------HHHH
Confidence 456679999999999999999999999999988764 4888888776443 3556
Q ss_pred hcC---CCCccEEEEECCCCcEEEcc
Q 008336 432 KFK---VSGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 432 ~~~---v~~~Pt~~lid~~G~i~~~~ 454 (569)
.|. ++++||++++|.+|+++.+.
T Consensus 102 ~~~~~~v~~iPt~i~~~~~G~~~~~~ 127 (167)
T 1z6n_A 102 QRLALERIAIPLVLVLDEEFNLLGRF 127 (167)
T ss_dssp TTTTCSSCCSSEEEEECTTCCEEEEE
T ss_pred HHHHcCCCCcCeEEEECCCCCEEEEE
Confidence 665 99999999999999998764
No 263
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.42 E-value=5.3e-13 Score=111.78 Aligned_cols=72 Identities=28% Similarity=0.538 Sum_probs=63.9
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
.+|+++|+||++||++|+.+.|.|.+++++++++ +.++.|++|.++ ++++.|+|
T Consensus 22 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~v~~~~~~-----------------------~~~~~~~v 75 (112)
T 1t00_A 22 NDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDK---IEIVKLNIDENP-----------------------GTAAKYGV 75 (112)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred CCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCC---eEEEEEEcCCCH-----------------------HHHHhCCC
Confidence 3789999999999999999999999999998654 899999988764 48899999
Q ss_pred CCccEEEEECCCCcEEEcc
Q 008336 436 SGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~ 454 (569)
.++||++++ ++|+++.+.
T Consensus 76 ~~~Pt~~~~-~~G~~~~~~ 93 (112)
T 1t00_A 76 MSIPTLNVY-QGGEVAKTI 93 (112)
T ss_dssp CSSSEEEEE-ETTEEEEEE
T ss_pred CcccEEEEE-eCCEEEEEE
Confidence 999999988 799998763
No 264
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.42 E-value=1.7e-13 Score=118.95 Aligned_cols=94 Identities=16% Similarity=0.342 Sum_probs=69.5
Q ss_pred eecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHH
Q 008336 350 VPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASL 429 (569)
Q Consensus 350 v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l 429 (569)
-.+++.+||++||+||++||++|+.+.|.|+++++++ ++.++.|++|... ++
T Consensus 33 ~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~-----~v~~~~vd~~~~~-----------------------~l 84 (133)
T 3cxg_A 33 QVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY-----YVTLVDIDVDIHP-----------------------KL 84 (133)
T ss_dssp HHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE-----ECEEEEEETTTCH-----------------------HH
T ss_pred HHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc-----CEEEEEEeccchH-----------------------HH
Confidence 3455667899999999999999999999998876655 2677777777553 58
Q ss_pred HHhcCCCCccEEEEE-CCCCc--EEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhhc
Q 008336 430 SRKFKVSGIPMLVAI-GPSGR--TITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAK 486 (569)
Q Consensus 430 ~~~~~v~~~Pt~~li-d~~G~--i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~~ 486 (569)
++.|+|+++||++++ +++|+ ++.+.. | .. .++|.+.|++++.
T Consensus 85 ~~~~~v~~~Pt~~~~~~~~g~g~~~~~~~-------G-----~~---~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 85 NDQHNIKALPTFEFYFNLNNEWVLVHTVE-------G-----AN---QNDIEKAFQKYCL 129 (133)
T ss_dssp HHHTTCCSSSEEEEEEEETTEEEEEEEEE-------S-----CC---HHHHHHHHHHHSE
T ss_pred HHhcCCCCCCEEEEEEecCCCeEEEEEEc-------C-----CC---HHHHHHHHHHHHH
Confidence 899999999999999 44666 777632 2 12 3456666766654
No 265
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.42 E-value=6.1e-13 Score=115.26 Aligned_cols=99 Identities=21% Similarity=0.355 Sum_probs=74.3
Q ss_pred ecCCCCCc-EEEEEecCCCHhhHhhHHHHH--HHHHHhcCCCCEEEEEEeC---CCCHHHHHHHHHhCCCcccccCCchh
Q 008336 32 KLDSLKGK-IGLYFSASWCGPCQRFTPILA--EVYNELSRQGDFEVIFVSG---DEDDEAFKGYFSKMPWLAVPFSDSET 105 (569)
Q Consensus 32 ~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~--~~~~~~~~~g~~~vv~v~~---d~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (569)
..+...|| ++|+||++||++|+.+.|.|. ++.+.+.. ++.++.|++ +..
T Consensus 23 ~~~~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~--~~~~~~vd~~~~~~~----------------------- 77 (133)
T 3fk8_A 23 AAGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK--HFEVVKIDVGNFDRN----------------------- 77 (133)
T ss_dssp HHHHHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH--HCEEEEEECTTTTSS-----------------------
T ss_pred HHHHhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC--CEEEEEEeCCcccch-----------------------
Confidence 33345689 999999999999999999999 99998864 489999999 433
Q ss_pred HHHHHHhcCC---CCccEEEEECCCCcEEEcCCcceeecccCCCCCccHHHHHHHHHH
Q 008336 106 RDKLDELFKV---MGIPHLVILDENGKVLSDGGVEIIREYGVEGYPFTVERIKEMKEQ 160 (569)
Q Consensus 106 ~~~l~~~~~v---~~~P~~~lid~~G~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 160 (569)
..+++.|+| .++|+++++|++|+++.......+... ...+.+.+.++++.
T Consensus 78 -~~l~~~~~v~~~~~~Pt~~~~d~~G~~~~~~~g~~~~~~----~~~~~~~l~~~l~~ 130 (133)
T 3fk8_A 78 -LELSQAYGDPIQDGIPAVVVVNSDGKVRYTTKGGELANA----RKMSDQGIYDFFAK 130 (133)
T ss_dssp -HHHHHHTTCGGGGCSSEEEEECTTSCEEEECCSCTTTTG----GGSCHHHHHHHHHH
T ss_pred -HHHHHHhCCccCCccceEEEECCCCCEEEEecCCccccc----ccCCHHHHHHHHHH
Confidence 358899999 999999999999999876332111111 12355666666543
No 266
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.42 E-value=7e-13 Score=115.14 Aligned_cols=68 Identities=10% Similarity=0.273 Sum_probs=60.6
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
.++ |+|+|||+|||+|+.+.|.|.++++++.+ .+.|+.|++|+.+ +++..|+|
T Consensus 40 ~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~--~v~f~kVDVDe~~------------------------e~a~~y~V 93 (160)
T 2av4_A 40 DERLVCIRFGHDYDPDCMKMDELLYKVADDIKN--FCVIYLVDITEVP------------------------DFNTMYEL 93 (160)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT--TEEEEEEETTTCC------------------------TTTTTTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHccC--CcEEEEEECCCCH------------------------HHHHHcCC
Confidence 456 99999999999999999999999999964 4889999999774 48899999
Q ss_pred CCccEEEEECCCCcEE
Q 008336 116 MGIPHLVILDENGKVL 131 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~ 131 (569)
+++||++++ ++|+.+
T Consensus 94 ~siPT~~fF-k~G~~v 108 (160)
T 2av4_A 94 YDPVSVMFF-YRNKHM 108 (160)
T ss_dssp CSSEEEEEE-ETTEEE
T ss_pred CCCCEEEEE-ECCEEE
Confidence 999999988 678776
No 267
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.42 E-value=4.9e-13 Score=111.06 Aligned_cols=71 Identities=14% Similarity=0.231 Sum_probs=62.9
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
.+++++|+||++||++|+++.|.|.+++++++ ++.++.|++|.++ ++++.|+|
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~----~~~~~~vd~~~~~-----------------------~~~~~~~v 72 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP----QAVFLEVDVHQCQ-----------------------GTAATNNI 72 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTSH-----------------------HHHHHTTC
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHHHHHCC----CcEEEEEECccCH-----------------------HHHHhcCC
Confidence 47999999999999999999999999999883 4899999988764 48899999
Q ss_pred CCccEEEEECCCCcEEEcc
Q 008336 436 SGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~ 454 (569)
+++||++++ ++|+++.+.
T Consensus 73 ~~~Pt~~~~-~~G~~~~~~ 90 (107)
T 1gh2_A 73 SATPTFQFF-RNKVRIDQY 90 (107)
T ss_dssp CSSSEEEEE-ETTEEEEEE
T ss_pred CcccEEEEE-ECCeEEEEE
Confidence 999999999 799988763
No 268
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.41 E-value=8.7e-13 Score=109.43 Aligned_cols=71 Identities=23% Similarity=0.556 Sum_probs=63.5
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008336 357 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 436 (569)
Q Consensus 357 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 436 (569)
+++++|+||++||++|+.+.|.|.+++++++++ +.++.|++|.++ ++++.|+|.
T Consensus 19 ~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~v~~~~~~-----------------------~~~~~~~v~ 72 (107)
T 1dby_A 19 SVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDK---LKCVKLNTDESP-----------------------NVASEYGIR 72 (107)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTCH-----------------------HHHHHHTCC
T ss_pred CCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCc---eEEEEEECCCCH-----------------------HHHHHCCCC
Confidence 789999999999999999999999999998754 899999988764 488999999
Q ss_pred CccEEEEECCCCcEEEcc
Q 008336 437 GIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 437 ~~Pt~~lid~~G~i~~~~ 454 (569)
++||++++ ++|+++.+.
T Consensus 73 ~~Pt~~~~-~~G~~~~~~ 89 (107)
T 1dby_A 73 SIPTIMVF-KGGKKCETI 89 (107)
T ss_dssp SSCEEEEE-SSSSEEEEE
T ss_pred cCCEEEEE-eCCEEEEEE
Confidence 99999998 799998764
No 269
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.41 E-value=4.5e-13 Score=112.20 Aligned_cols=71 Identities=17% Similarity=0.381 Sum_probs=62.9
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008336 357 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 436 (569)
Q Consensus 357 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 436 (569)
+++++|+||++||++|+.+.|.|.++++++++ ++.++.|++|... .+++.|+|+
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~vd~~~~~-----------------------~~~~~~~v~ 77 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAG---KVIFLKVDVDAVA-----------------------AVAEAAGIT 77 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TSEEEEEETTTTH-----------------------HHHHHHTCC
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC---CeEEEEEECCchH-----------------------HHHHHcCCC
Confidence 78999999999999999999999999998865 3899999988654 588999999
Q ss_pred CccEEEEECCCCcEEEcc
Q 008336 437 GIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 437 ~~Pt~~lid~~G~i~~~~ 454 (569)
++||++++ ++|+++.+.
T Consensus 78 ~~Pt~~~~-~~G~~~~~~ 94 (112)
T 1ep7_A 78 AMPTFHVY-KDGVKADDL 94 (112)
T ss_dssp BSSEEEEE-ETTEEEEEE
T ss_pred cccEEEEE-ECCeEEEEE
Confidence 99998888 899998763
No 270
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.41 E-value=4.4e-13 Score=115.42 Aligned_cols=72 Identities=26% Similarity=0.531 Sum_probs=64.2
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
.+++++|+||++||++|+.+.|.|++++++++++ +.++.|++|.++ ++++.|+|
T Consensus 39 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~---v~~~~vd~~~~~-----------------------~l~~~~~v 92 (128)
T 2o8v_B 39 ADGAILVDFWAEWCGPAKMIAPILDEIADEYQGK---LTVAKLNIDQNP-----------------------GTAPKYGI 92 (128)
T ss_dssp CSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTT---EEEEEEETTTCC-----------------------TTSGGGTC
T ss_pred cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC---eEEEEEECCCCH-----------------------HHHHHcCC
Confidence 4799999999999999999999999999998754 899999988664 37889999
Q ss_pred CCccEEEEECCCCcEEEcc
Q 008336 436 SGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~ 454 (569)
.++||++++ ++|+++.+.
T Consensus 93 ~~~Pt~~~~-~~G~~~~~~ 110 (128)
T 2o8v_B 93 RGIPTLLLF-KNGEVAATK 110 (128)
T ss_dssp CSSSEEEEE-ETTEEEEEE
T ss_pred CccCEEEEE-eCCEEEEEE
Confidence 999999999 899998763
No 271
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.41 E-value=1.4e-13 Score=125.01 Aligned_cols=103 Identities=17% Similarity=0.214 Sum_probs=67.0
Q ss_pred eecccCCCCEEEEEEecCCChhHHhhhHHH---HHHHHHHhhcCCCeEEEEEeCCCChhHHHH--HHhcCCCcccccCch
Q 008336 350 VPVSDLAGKTILLYFSAHWCPPCRAFLPKL---IDAYKKIKERNESLEVVFISSDRDQTSFDE--FFKGMPWLALPFGDA 424 (569)
Q Consensus 350 v~l~~~~gk~vll~F~a~wC~~C~~~~~~l---~~l~~~~~~~~~~~~vv~is~d~~~~~~~~--~~~~~~~~~~~~~~d 424 (569)
+.++..+||+|||+|||+||++|+.+.+.+ .++.+.++++ +.++.|++|...+.... +.....+..+....+
T Consensus 40 ~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~---~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (172)
T 3f9u_A 40 MEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINND---YVLITLYVDNKTPLTEPVKIMENGTERTLRTVGD 116 (172)
T ss_dssp HHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHH---CEEEEEETTCCCEEEEEEEEEETTEEEEEEEHHH
T ss_pred HHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCC---EEEEEEecCcccccchhhhhhhcchhhhhhhhhh
Confidence 344445699999999999999999975444 5555555544 89999999865421000 000011111222222
Q ss_pred hhHHH-HHhcCCCCccEEEEECCCCcEEEccc
Q 008336 425 RKASL-SRKFKVSGIPMLVAIGPSGRTITKEA 455 (569)
Q Consensus 425 ~~~~l-~~~~~v~~~Pt~~lid~~G~i~~~~~ 455 (569)
....+ .+.|+|.++||++|||++|+++.+..
T Consensus 117 ~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~~ 148 (172)
T 3f9u_A 117 KWSYLQRVKFGANAQPFYVLIDNEGNPLNKSY 148 (172)
T ss_dssp HHHHHHHHHHSCCCSSEEEEECTTSCBSSCCB
T ss_pred hhhHHHHHHcCCCCcceEEEECCCCCEEeecc
Confidence 22333 58899999999999999999988743
No 272
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.41 E-value=1e-12 Score=115.18 Aligned_cols=71 Identities=11% Similarity=0.274 Sum_probs=63.1
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008336 357 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 436 (569)
Q Consensus 357 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 436 (569)
+++++|+|||+||++|+.+.|.|++++++++++ +.++.|++|.++ ++++.|+|+
T Consensus 23 ~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~---v~~~~vd~d~~~-----------------------~~~~~~~i~ 76 (142)
T 1qgv_A 23 DRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNF---AVIYLVDITEVP-----------------------DFNKMYELY 76 (142)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT---EEEEEEETTTCC-----------------------TTTTSSCSC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC---eEEEEEccccCH-----------------------HHHHHcCCC
Confidence 799999999999999999999999999998654 899999988664 378899999
Q ss_pred CccEEEEECCCCcEEEcc
Q 008336 437 GIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 437 ~~Pt~~lid~~G~i~~~~ 454 (569)
++||++++ .+|+++...
T Consensus 77 ~~Pt~~~~-~~G~~v~~~ 93 (142)
T 1qgv_A 77 DPCTVMFF-FRNKHIMID 93 (142)
T ss_dssp SSCEEEEE-ETTEEEEEE
T ss_pred CCCEEEEE-ECCcEEEEe
Confidence 99999999 688888753
No 273
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.41 E-value=5.3e-13 Score=113.32 Aligned_cols=72 Identities=24% Similarity=0.558 Sum_probs=64.0
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
.++++||+||++||++|+++.|.|.+++++++++ +.++.|++|.+. ++++.|+|
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~---v~~~~vd~d~~~-----------------------~l~~~~~v 83 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGK---VVMAKVDIDDHT-----------------------DLAIEYEV 83 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTS---SEEEEEETTTTH-----------------------HHHHHTTC
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC---eEEEEEeCCCCH-----------------------HHHHHcCC
Confidence 3789999999999999999999999999988654 899999988664 48899999
Q ss_pred CCccEEEEECCCCcEEEcc
Q 008336 436 SGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~ 454 (569)
.++|+++++ ++|+++.+.
T Consensus 84 ~~~Pt~~~~-~~G~~~~~~ 101 (119)
T 1w4v_A 84 SAVPTVLAM-KNGDVVDKF 101 (119)
T ss_dssp CSSSEEEEE-ETTEEEEEE
T ss_pred CcccEEEEE-eCCcEEEEE
Confidence 999999999 899998763
No 274
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.41 E-value=7.5e-13 Score=117.16 Aligned_cols=70 Identities=20% Similarity=0.308 Sum_probs=62.0
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
.+++|||+|||+||++|+.+.|.|.+++++++++ +.++.|++|..+ ++++.|+|
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~---~~~~~vd~d~~~-----------------------~l~~~~~v 75 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM---AAIYLVDVDQTA-----------------------VYTQYFDI 75 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT---EEEEEEETTTCC-----------------------HHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc---eEEEEEECCcCH-----------------------HHHHHcCC
Confidence 3799999999999999999999999999988654 899999988665 48999999
Q ss_pred CCccEEEEECCCCcEEE
Q 008336 436 SGIPMLVAIGPSGRTIT 452 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~ 452 (569)
.++||++++ ++|+++.
T Consensus 76 ~~~Pt~~~~-~~G~~v~ 91 (149)
T 3gix_A 76 SYIPSTVFF-FNGQHMK 91 (149)
T ss_dssp CSSSEEEEE-ETTEEEE
T ss_pred CccCeEEEE-ECCeEEE
Confidence 999999965 7899883
No 275
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.41 E-value=6.7e-13 Score=109.89 Aligned_cols=71 Identities=20% Similarity=0.342 Sum_probs=55.6
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
.+++++|+||++||++|+.+.|.|.++++++. ++.++.|++|.++ ++++.|+|
T Consensus 17 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~----~~~~~~vd~~~~~-----------------------~l~~~~~v 69 (105)
T 4euy_A 17 EQQLVLLFIKTENCGVCDVMLRKVNYVLENYN----YVEKIEILLQDMQ-----------------------EIAGRYAV 69 (105)
T ss_dssp CSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT----TEEEEEEEECCC--------------------------------
T ss_pred cCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC----CceEEEEECCCCH-----------------------HHHHhcCC
Confidence 47999999999999999999999999998873 4899999988765 48899999
Q ss_pred CCccEEEEECCCCcEEEcc
Q 008336 436 SGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~ 454 (569)
+++||++++ ++|+++.+.
T Consensus 70 ~~~Pt~~~~-~~G~~~~~~ 87 (105)
T 4euy_A 70 FTGPTVLLF-YNGKEILRE 87 (105)
T ss_dssp CCCCEEEEE-ETTEEEEEE
T ss_pred CCCCEEEEE-eCCeEEEEE
Confidence 999999999 599998774
No 276
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.41 E-value=1.5e-12 Score=115.17 Aligned_cols=90 Identities=27% Similarity=0.532 Sum_probs=74.9
Q ss_pred cCccCCc-eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhC
Q 008336 16 SSSARDF-LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKM 93 (569)
Q Consensus 16 g~~~pdf-~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~ 93 (569)
|.++++. +.+++++.+......++ ++|+||++||++|+.+.|.|.++++++.. ++.++.|+++.+.
T Consensus 32 ~~~~~~~~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~--~~~~~~vd~~~~~---------- 99 (148)
T 3p2a_A 32 GHSLFDGEVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG--KVRFVKVNTEAEP---------- 99 (148)
T ss_dssp CCBTTCCCCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCH----------
T ss_pred CCccccCCceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC--ceEEEEEECcCCH----------
Confidence 5566666 55667776665556788 99999999999999999999999999864 4899999998764
Q ss_pred CCcccccCCchhHHHHHHhcCCCCccEEEEECCCCcEEE
Q 008336 94 PWLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~ 132 (569)
.+++.|+|.++|+++++ ++|+++.
T Consensus 100 --------------~l~~~~~v~~~Pt~~~~-~~G~~~~ 123 (148)
T 3p2a_A 100 --------------ALSTRFRIRSIPTIMLY-RNGKMID 123 (148)
T ss_dssp --------------HHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred --------------HHHHHCCCCccCEEEEE-ECCeEEE
Confidence 48899999999999999 6888775
No 277
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.41 E-value=2.2e-12 Score=110.83 Aligned_cols=72 Identities=13% Similarity=0.232 Sum_probs=61.0
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhc--CCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhc
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKER--NESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKF 433 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~--~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~ 433 (569)
.+++++|+||++||++|+.+.|.|.++++.+..+ ..++.++.|++|..+ ++++.|
T Consensus 32 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~-----------------------~l~~~~ 88 (127)
T 3h79_A 32 PEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYP-----------------------DVIERM 88 (127)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCH-----------------------HHHHHT
T ss_pred CCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccH-----------------------hHHHhc
Confidence 3799999999999999999999999999988632 235888888887664 589999
Q ss_pred CCCCccEEEEECCCCcE
Q 008336 434 KVSGIPMLVAIGPSGRT 450 (569)
Q Consensus 434 ~v~~~Pt~~lid~~G~i 450 (569)
+|+++||++++++++++
T Consensus 89 ~v~~~Pt~~~~~~g~~~ 105 (127)
T 3h79_A 89 RVSGFPTMRYYTRIDKQ 105 (127)
T ss_dssp TCCSSSEEEEECSSCSS
T ss_pred CCccCCEEEEEeCCCCC
Confidence 99999999999766653
No 278
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.40 E-value=1.1e-12 Score=114.16 Aligned_cols=70 Identities=29% Similarity=0.572 Sum_probs=62.4
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
.++ ++|+||++||++|+.+.|.|.+++++++. ++.++.|+++.+. .+++.|+|
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~------------------------~l~~~~~v 90 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYDG--QIVIYKVDTEKEQ------------------------ELAGAFGI 90 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCH------------------------HHHHHTTC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC--CEEEEEEeCCCCH------------------------HHHHHcCC
Confidence 467 99999999999999999999999999864 4899999998763 48899999
Q ss_pred CCccEEEEECCCCcEEE
Q 008336 116 MGIPHLVILDENGKVLS 132 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~ 132 (569)
.++|+++++|++|+++.
T Consensus 91 ~~~Pt~~~~~~~G~~~~ 107 (136)
T 2l5l_A 91 RSIPSILFIPMEGKPEM 107 (136)
T ss_dssp CSSCEEEEECSSSCCEE
T ss_pred CCCCEEEEECCCCcEEE
Confidence 99999999999998763
No 279
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.40 E-value=5.3e-13 Score=110.29 Aligned_cols=71 Identities=21% Similarity=0.442 Sum_probs=63.0
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
++++++|+||++||++|+.+.|.+.+++++++ ++.++.|+.|..+ ++++.|+|
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~----~~~~~~vd~~~~~-----------------------~~~~~~~v 71 (105)
T 3m9j_A 19 GDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS----NVIFLEVDVDDCQ-----------------------DVASESEV 71 (105)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHST----TSEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred CCCeEEEEEECCCChhhHHHHHHHHHHHHHcc----CeEEEEEEhhhhH-----------------------HHHHHcCC
Confidence 48999999999999999999999999998875 3888999888664 48899999
Q ss_pred CCccEEEEECCCCcEEEcc
Q 008336 436 SGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~ 454 (569)
+++||++++ ++|+++.+.
T Consensus 72 ~~~Pt~~~~-~~g~~~~~~ 89 (105)
T 3m9j_A 72 KSMPTFQFF-KKGQKVGEF 89 (105)
T ss_dssp CBSSEEEEE-ETTEEEEEE
T ss_pred CcCcEEEEE-ECCeEEEEE
Confidence 999999999 789988773
No 280
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.40 E-value=2.2e-14 Score=129.34 Aligned_cols=111 Identities=15% Similarity=0.367 Sum_probs=75.8
Q ss_pred eecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHH
Q 008336 350 VPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASL 429 (569)
Q Consensus 350 v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l 429 (569)
+.....+||+|||+||++||++|+.+.|.|.++.+.+... +.++.|++|.+.+ .+
T Consensus 39 ~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~---~~~~~v~~d~~~~----------------------~~ 93 (164)
T 1sen_A 39 KKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELS---HNFVMVNLEDEEE----------------------PK 93 (164)
T ss_dssp HHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHH---TTSEEEEEEGGGS----------------------CS
T ss_pred HHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcC---CeEEEEEecCCch----------------------HH
Confidence 3334445899999999999999999999999977666543 6677888775432 13
Q ss_pred HHhcCC--CCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhhcCCC
Q 008336 430 SRKFKV--SGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWP 489 (569)
Q Consensus 430 ~~~~~v--~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~~~~~ 489 (569)
+..|++ .++||++++|++|+++.+..+. .+...|.+.....++|.+.|++++....
T Consensus 94 ~~~~~~~~~~~Pt~~~~d~~G~~~~~~~G~----~~~~~~~~~~~~~~~l~~~l~~~l~~~~ 151 (164)
T 1sen_A 94 DEDFSPDGGYIPRILFLDPSGKVHPEIINE----NGNPSYKYFYVSAEQVVQGMKEAQERLT 151 (164)
T ss_dssp CGGGCTTCSCSSEEEEECTTSCBCTTCCCT----TSCTTSTTCCCSHHHHHHHHHHHHHHHG
T ss_pred HHHhcccCCcCCeEEEECCCCCEEEEEeCC----CCccchhcccCCHHHHHHHHHHHHHhcc
Confidence 456777 6699999999999998764321 1222222333445666666666654433
No 281
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.40 E-value=7.6e-13 Score=117.73 Aligned_cols=89 Identities=18% Similarity=0.380 Sum_probs=72.4
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
+++++||+||++||++|+++.|.|.+++++++ ++.++.|++|..+ .+++.|+|
T Consensus 31 ~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~----~v~~~~vd~~~~~-----------------------~l~~~~~v 83 (153)
T 2wz9_A 31 AKSLLVVHFWAPWAPQCAQMNEVMAELAKELP----QVSFVKLEAEGVP-----------------------EVSEKYEI 83 (153)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTSH-----------------------HHHHHTTC
T ss_pred CCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC----CeEEEEEECCCCH-----------------------HHHHHcCC
Confidence 48999999999999999999999999998873 4899999988764 48899999
Q ss_pred CCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhhcC
Q 008336 436 SGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKG 487 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~~~ 487 (569)
+++|++++++ +|+++.+.. | ... ++|.+.|++++..
T Consensus 84 ~~~Pt~~~~~-~G~~~~~~~-------G-----~~~---~~l~~~i~~~l~~ 119 (153)
T 2wz9_A 84 SSVPTFLFFK-NSQKIDRLD-------G-----AHA---PELTKKVQRHASS 119 (153)
T ss_dssp CSSSEEEEEE-TTEEEEEEE-------S-----SCH---HHHHHHHHHHSCT
T ss_pred CCCCEEEEEE-CCEEEEEEe-------C-----CCH---HHHHHHHHHHhcc
Confidence 9999999998 999987632 2 122 3466667776654
No 282
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.39 E-value=1.1e-12 Score=108.51 Aligned_cols=72 Identities=25% Similarity=0.619 Sum_probs=63.4
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
++++++|+||++||++|+.+.|.|++++++++. ++.++.|++|.++ .+++.|++
T Consensus 19 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~~~-----------------------~~~~~~~v 72 (106)
T 1xwb_A 19 SGKLVVLDFFATWCGPCKMISPKLVELSTQFAD---NVVVLKVDVDECE-----------------------DIAMEYNI 72 (106)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TEEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred CCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC---CeEEEEEeccchH-----------------------HHHHHcCC
Confidence 489999999999999999999999999998864 4899999988664 48899999
Q ss_pred CCccEEEEECCCCcEEEcc
Q 008336 436 SGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~ 454 (569)
.++||++++ ++|+++.+.
T Consensus 73 ~~~Pt~~~~-~~G~~~~~~ 90 (106)
T 1xwb_A 73 SSMPTFVFL-KNGVKVEEF 90 (106)
T ss_dssp CSSSEEEEE-ETTEEEEEE
T ss_pred CcccEEEEE-cCCcEEEEE
Confidence 999998888 789988763
No 283
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.39 E-value=8.4e-13 Score=113.80 Aligned_cols=72 Identities=25% Similarity=0.499 Sum_probs=62.7
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
.+++++|+||++||++|+++.|.|.++++++++. +.++.|++|... .+++.|+|
T Consensus 34 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~---~~~~~vd~~~~~-----------------------~l~~~~~v 87 (130)
T 2dml_A 34 SDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDV---VKVGAVNADKHQ-----------------------SLGGQYGV 87 (130)
T ss_dssp CSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTT---SEEEEEETTTCH-----------------------HHHHHHTC
T ss_pred CCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCc---eEEEEEeCCCCH-----------------------HHHHHcCC
Confidence 3789999999999999999999999999998754 888999888664 48899999
Q ss_pred CCccEEEEECCCCcEEEc
Q 008336 436 SGIPMLVAIGPSGRTITK 453 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~ 453 (569)
+++||+++++++|+++.+
T Consensus 88 ~~~Pt~~~~~~~~~~~~~ 105 (130)
T 2dml_A 88 QGFPTIKIFGANKNKPED 105 (130)
T ss_dssp CSSSEEEEESSCTTSCEE
T ss_pred CccCEEEEEeCCCCeEEE
Confidence 999999999988874443
No 284
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.39 E-value=2.5e-13 Score=122.12 Aligned_cols=75 Identities=20% Similarity=0.289 Sum_probs=62.4
Q ss_pred ecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHH
Q 008336 32 KLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLD 110 (569)
Q Consensus 32 ~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 110 (569)
.+++++|+ ++|+|||+|||+|+.++|.|.++++.++ ++.++.|++|.++ .+.
T Consensus 48 ~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~---~v~~~~v~~d~~~------------------------~~~ 100 (167)
T 1z6n_A 48 RLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP---NIELAIISKGRAE------------------------DDL 100 (167)
T ss_dssp HHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT---TEEEEEECHHHHH------------------------HHT
T ss_pred HHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC---CcEEEEEECCCCH------------------------HHH
Confidence 45678899 9999999999999999999999998764 4889988877443 355
Q ss_pred HhcC---CCCccEEEEECCCCcEEEc
Q 008336 111 ELFK---VMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 111 ~~~~---v~~~P~~~lid~~G~i~~~ 133 (569)
..|. +.++||++++|.+|+++..
T Consensus 101 ~~~~~~~v~~iPt~i~~~~~G~~~~~ 126 (167)
T 1z6n_A 101 RQRLALERIAIPLVLVLDEEFNLLGR 126 (167)
T ss_dssp TTTTTCSSCCSSEEEEECTTCCEEEE
T ss_pred HHHHHcCCCCcCeEEEECCCCCEEEE
Confidence 5565 9999999999998888764
No 285
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.39 E-value=1.1e-12 Score=110.17 Aligned_cols=72 Identities=31% Similarity=0.621 Sum_probs=64.8
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
.+++++|+||++||++|+.+.|.|.+++++++++ +.++.|++|.++ ++++.|+|
T Consensus 24 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~---v~~~~v~~~~~~-----------------------~~~~~~~v 77 (115)
T 1thx_A 24 AEQPVLVYFWASWCGPCQLMSPLINLAANTYSDR---LKVVKLEIDPNP-----------------------TTVKKYKV 77 (115)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT---CEEEEEESTTCH-----------------------HHHHHTTC
T ss_pred CCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCc---EEEEEEEcCCCH-----------------------HHHHHcCC
Confidence 4789999999999999999999999999998754 899999988764 48899999
Q ss_pred CCccEEEEECCCCcEEEcc
Q 008336 436 SGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~ 454 (569)
.++|+++++ ++|+++.+.
T Consensus 78 ~~~Pt~~~~-~~G~~~~~~ 95 (115)
T 1thx_A 78 EGVPALRLV-KGEQILDST 95 (115)
T ss_dssp CSSSEEEEE-ETTEEEEEE
T ss_pred CceeEEEEE-cCCEEEEEe
Confidence 999999999 899998863
No 286
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.39 E-value=2.2e-12 Score=110.59 Aligned_cols=68 Identities=18% Similarity=0.420 Sum_probs=59.8
Q ss_pred CEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCCC
Q 008336 358 KTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVSG 437 (569)
Q Consensus 358 k~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~ 437 (569)
+.++|+||++||++|+++.|.|.++++++++. ++.++.|++|.+. .+++.|+|++
T Consensus 23 ~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~--~v~~~~vd~~~~~-----------------------~~~~~~~v~~ 77 (126)
T 1x5e_A 23 GDWMIEFYAPWCPACQNLQPEWESFAEWGEDL--EVNIAKVDVTEQP-----------------------GLSGRFIINA 77 (126)
T ss_dssp SEEEEEEECSSCHHHHHHHHHHHHHHHHHGGG--TCEEEEEETTTCH-----------------------HHHHHTTCCS
T ss_pred CCEEEEEECCCCHHHHHHhHHHHHHHHHhccC--CeEEEEEECcCCH-----------------------HHHHHcCCcc
Confidence 35999999999999999999999999998753 4899999888664 4889999999
Q ss_pred ccEEEEECCCCcEE
Q 008336 438 IPMLVAIGPSGRTI 451 (569)
Q Consensus 438 ~Pt~~lid~~G~i~ 451 (569)
+||++++ ++|++.
T Consensus 78 ~Pt~~~~-~~G~~~ 90 (126)
T 1x5e_A 78 LPTIYHC-KDGEFR 90 (126)
T ss_dssp SSEEEEE-ETTEEE
T ss_pred cCEEEEE-eCCeEE
Confidence 9999999 899863
No 287
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.38 E-value=8.8e-13 Score=112.98 Aligned_cols=70 Identities=17% Similarity=0.459 Sum_probs=62.5
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
.++++||+||++||++|+.+.|.|.+++++++ ++.++.|++|... ++++.|+|
T Consensus 36 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~----~v~~~~vd~d~~~-----------------------~l~~~~~v 88 (125)
T 1r26_A 36 EDILTVAWFTAVWCGPCKTIERPMEKIAYEFP----TVKFAKVDADNNS-----------------------EIVSKCRV 88 (125)
T ss_dssp SSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT----TSEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC----CCEEEEEECCCCH-----------------------HHHHHcCC
Confidence 47899999999999999999999999998883 4899999988664 48899999
Q ss_pred CCccEEEEECCCCcEEEc
Q 008336 436 SGIPMLVAIGPSGRTITK 453 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~ 453 (569)
.++||++++ ++|+++.+
T Consensus 89 ~~~Pt~~i~-~~G~~~~~ 105 (125)
T 1r26_A 89 LQLPTFIIA-RSGKMLGH 105 (125)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CcccEEEEE-eCCeEEEE
Confidence 999999888 89999876
No 288
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.38 E-value=1.1e-12 Score=116.92 Aligned_cols=72 Identities=22% Similarity=0.585 Sum_probs=64.6
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
.++++||+||++||++|+.+.|.|++++++++++ +.++.|++|.++ ++++.|+|
T Consensus 63 ~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~---v~~~~vd~~~~~-----------------------~l~~~~~i 116 (155)
T 2ppt_A 63 DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQ---VRLAKIDTQAHP-----------------------AVAGRHRI 116 (155)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---CEEEEEETTTST-----------------------HHHHHTTC
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCC---EEEEEEeCCccH-----------------------HHHHHcCC
Confidence 4789999999999999999999999999999754 899999988664 48999999
Q ss_pred CCccEEEEECCCCcEEEcc
Q 008336 436 SGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~ 454 (569)
+++||++++ ++|+++.+.
T Consensus 117 ~~~Pt~~~~-~~G~~~~~~ 134 (155)
T 2ppt_A 117 QGIPAFILF-HKGRELARA 134 (155)
T ss_dssp CSSSEEEEE-ETTEEEEEE
T ss_pred CcCCEEEEE-eCCeEEEEe
Confidence 999999999 799998763
No 289
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.38 E-value=3e-12 Score=105.99 Aligned_cols=72 Identities=28% Similarity=0.565 Sum_probs=64.5
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
.+++++|+||++||++|+.+.|.|.+++++++++ +.++.|+++.++ .+++.|+|
T Consensus 19 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~-----------------------~~~~~~~v 72 (107)
T 2i4a_A 19 ASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGK---VTVAKVNIDDNP-----------------------ETPNAYQV 72 (107)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTS---EEEEEEETTTCC-----------------------HHHHHTTC
T ss_pred CCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCc---EEEEEEECCCCH-----------------------HHHHhcCC
Confidence 4789999999999999999999999999998754 899999988664 48899999
Q ss_pred CCccEEEEECCCCcEEEcc
Q 008336 436 SGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~ 454 (569)
.++|+++++ ++|+++.+.
T Consensus 73 ~~~Pt~~~~-~~G~~~~~~ 90 (107)
T 2i4a_A 73 RSIPTLMLV-RDGKVIDKK 90 (107)
T ss_dssp CSSSEEEEE-ETTEEEEEE
T ss_pred CccCEEEEE-eCCEEEEEe
Confidence 999999999 899998763
No 290
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.38 E-value=6.1e-13 Score=112.48 Aligned_cols=72 Identities=25% Similarity=0.552 Sum_probs=62.3
Q ss_pred cCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhc
Q 008336 354 DLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKF 433 (569)
Q Consensus 354 ~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~ 433 (569)
+.++++++|+||++||++|+++.|.|+++++++ ++.++.|++|... ++++.|
T Consensus 30 ~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~-----~~~~~~vd~~~~~-----------------------~~~~~~ 81 (117)
T 2xc2_A 30 QHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY-----DAIFVKVDVDKLE-----------------------ETARKY 81 (117)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS-----SSEEEEEETTTSH-----------------------HHHHHT
T ss_pred hCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc-----CcEEEEEECCccH-----------------------HHHHHc
Confidence 345899999999999999999999999988776 3888999888654 488999
Q ss_pred CCCCccEEEEECCCCcEEEcc
Q 008336 434 KVSGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 434 ~v~~~Pt~~lid~~G~i~~~~ 454 (569)
+|+++||++++ ++|+++.+.
T Consensus 82 ~v~~~Pt~~~~-~~G~~~~~~ 101 (117)
T 2xc2_A 82 NISAMPTFIAI-KNGEKVGDV 101 (117)
T ss_dssp TCCSSSEEEEE-ETTEEEEEE
T ss_pred CCCccceEEEE-eCCcEEEEE
Confidence 99999998888 799998763
No 291
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.38 E-value=4.6e-13 Score=114.09 Aligned_cols=67 Identities=18% Similarity=0.321 Sum_probs=60.4
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008336 357 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 436 (569)
Q Consensus 357 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 436 (569)
+++++|+||++||++|+.+.|.|.+++++++++ +.++.|+++..+ ++++.|+|+
T Consensus 21 ~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~---~~~~~vd~~~~~-----------------------~~~~~~~v~ 74 (122)
T 3aps_A 21 KTHWVVDFYAPWCGPCQNFAPEFELLARMIKGK---VRAGKVDCQAYP-----------------------QTCQKAGIK 74 (122)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---CEEEEEETTTCH-----------------------HHHHHTTCC
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCC---eEEEEEeCcCCH-----------------------HHHHHcCCC
Confidence 789999999999999999999999999998754 899999988764 488999999
Q ss_pred CccEEEEECCCCc
Q 008336 437 GIPMLVAIGPSGR 449 (569)
Q Consensus 437 ~~Pt~~lid~~G~ 449 (569)
++||+++++++|+
T Consensus 75 ~~Pt~~~~~~~~~ 87 (122)
T 3aps_A 75 AYPSVKLYQYERA 87 (122)
T ss_dssp SSSEEEEEEEEGG
T ss_pred ccceEEEEeCCCc
Confidence 9999999987776
No 292
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=4.1e-12 Score=109.85 Aligned_cols=74 Identities=19% Similarity=0.486 Sum_probs=62.5
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhc-CCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKER-NESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFK 434 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~ 434 (569)
.++++||+||++||++|+.+.|.|.+++++++.. ..++.++.|+++.+. .+++.|+
T Consensus 24 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-----------------------~l~~~~~ 80 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQ-----------------------VLASRYG 80 (133)
T ss_dssp SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCC-----------------------HHHHHHT
T ss_pred CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCH-----------------------HHHHhCC
Confidence 3789999999999999999999999999999731 124888888887654 5889999
Q ss_pred CCCccEEEEECCCCcEEEc
Q 008336 435 VSGIPMLVAIGPSGRTITK 453 (569)
Q Consensus 435 v~~~Pt~~lid~~G~i~~~ 453 (569)
|+++||++++++ |+++.+
T Consensus 81 v~~~Pt~~~~~~-g~~~~~ 98 (133)
T 1x5d_A 81 IRGFPTIKIFQK-GESPVD 98 (133)
T ss_dssp CCSSSEEEEEET-TEEEEE
T ss_pred CCeeCeEEEEeC-CCceEE
Confidence 999999999976 877665
No 293
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.37 E-value=2.8e-12 Score=107.05 Aligned_cols=71 Identities=23% Similarity=0.488 Sum_probs=63.9
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008336 357 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 436 (569)
Q Consensus 357 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 436 (569)
+++++|+||++||++|+.+.|.|.+++++++++ +.++.|++|..+ .+++.|+|.
T Consensus 22 ~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~---v~~~~vd~~~~~-----------------------~l~~~~~v~ 75 (111)
T 3gnj_A 22 GKACLVMFSRKNCHVCQKVTPVLEELRLNYEES---FGFYYVDVEEEK-----------------------TLFQRFSLK 75 (111)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT---SEEEEEETTTCH-----------------------HHHHHTTCC
T ss_pred CCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCc---eEEEEEECCcCh-----------------------hHHHhcCCC
Confidence 789999999999999999999999999998754 899999998765 489999999
Q ss_pred CccEEEEECCCCcEEEcc
Q 008336 437 GIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 437 ~~Pt~~lid~~G~i~~~~ 454 (569)
++||++++ ++|+++.+.
T Consensus 76 ~~Pt~~~~-~~g~~~~~~ 92 (111)
T 3gnj_A 76 GVPQILYF-KDGEYKGKM 92 (111)
T ss_dssp SSCEEEEE-ETTEEEEEE
T ss_pred cCCEEEEE-ECCEEEEEE
Confidence 99999999 789988763
No 294
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.37 E-value=2.6e-12 Score=112.25 Aligned_cols=85 Identities=24% Similarity=0.447 Sum_probs=68.2
Q ss_pred eecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCC-CEEEEEEeCCCCHHHHHHHHHhCCCccccc
Q 008336 23 LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQG-DFEVIFVSGDEDDEAFKGYFSKMPWLAVPF 100 (569)
Q Consensus 23 ~~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g-~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~ 100 (569)
+..++++.+...-..++ +||+||++||++|+.+.|.|.++++++...+ ++.++.|+++.+.
T Consensus 19 v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~----------------- 81 (140)
T 2dj1_A 19 VWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSAS----------------- 81 (140)
T ss_dssp EEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCH-----------------
T ss_pred CEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccH-----------------
Confidence 34456665554334678 9999999999999999999999999998653 4888888887653
Q ss_pred CCchhHHHHHHhcCCCCccEEEEECCCCcEEE
Q 008336 101 SDSETRDKLDELFKVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 101 ~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~ 132 (569)
.+++.|+|.++|+++++ ++|++..
T Consensus 82 -------~~~~~~~v~~~Pt~~~~-~~G~~~~ 105 (140)
T 2dj1_A 82 -------MLASKFDVSGYPTIKIL-KKGQAVD 105 (140)
T ss_dssp -------HHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHCCCCccCeEEEE-ECCcEEE
Confidence 48899999999999999 7787443
No 295
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.37 E-value=1.3e-12 Score=109.02 Aligned_cols=78 Identities=22% Similarity=0.503 Sum_probs=64.6
Q ss_pred CCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchh
Q 008336 27 NGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSET 105 (569)
Q Consensus 27 ~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (569)
+++.+...-.++| ++|+||++||++|+.+.|.|.+++++++ ++.++.|+++...
T Consensus 13 ~~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~---~~~~~~vd~~~~~---------------------- 67 (109)
T 3f3q_A 13 TASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP---QADFYKLDVDELG---------------------- 67 (109)
T ss_dssp SHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTCH----------------------
T ss_pred CHHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC---CCEEEEEECCCCH----------------------
Confidence 3334443334588 9999999999999999999999999985 3889999998764
Q ss_pred HHHHHHhcCCCCccEEEEECCCCcEEE
Q 008336 106 RDKLDELFKVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 106 ~~~l~~~~~v~~~P~~~lid~~G~i~~ 132 (569)
.+++.|+|.++|++++++ +|+++.
T Consensus 68 --~l~~~~~v~~~Pt~~~~~-~G~~~~ 91 (109)
T 3f3q_A 68 --DVAQKNEVSAMPTLLLFK-NGKEVA 91 (109)
T ss_dssp --HHHHHTTCCSSSEEEEEE-TTEEEE
T ss_pred --HHHHHcCCCccCEEEEEE-CCEEEE
Confidence 488999999999999996 888775
No 296
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.37 E-value=1.1e-12 Score=112.09 Aligned_cols=73 Identities=15% Similarity=0.438 Sum_probs=61.5
Q ss_pred CCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcC
Q 008336 355 LAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFK 434 (569)
Q Consensus 355 ~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~ 434 (569)
.++|+++|+||++||++|+++.|.+.+++++++ ++.++.|+++.. ..++++.|+
T Consensus 35 ~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~----~~~~~~vd~~~~----------------------~~~~~~~~~ 88 (124)
T 1faa_A 35 AGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL----DVIFLKLDCNQE----------------------NKTLAKELG 88 (124)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEECSST----------------------THHHHHHHC
T ss_pred cCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC----CCEEEEEecCcc----------------------hHHHHHHcC
Confidence 358999999999999999999999999988875 378888888732 135889999
Q ss_pred CCCccEEEEECCCCcEEEcc
Q 008336 435 VSGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 435 v~~~Pt~~lid~~G~i~~~~ 454 (569)
|+++||++++ ++|+++.+.
T Consensus 89 v~~~Pt~~~~-~~G~~~~~~ 107 (124)
T 1faa_A 89 IRVVPTFKIL-KENSVVGEV 107 (124)
T ss_dssp CSSSSEEEEE-ETTEEEEEE
T ss_pred CCeeeEEEEE-eCCcEEEEE
Confidence 9999997766 899998773
No 297
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.36 E-value=3.3e-12 Score=109.47 Aligned_cols=83 Identities=18% Similarity=0.300 Sum_probs=65.4
Q ss_pred eecCCCceeecCCCCCcEEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCC
Q 008336 23 LIRSNGDQVKLDSLKGKIGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSD 102 (569)
Q Consensus 23 ~~~~~g~~v~l~~~~gkvlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~ 102 (569)
+..++.+.+.. .++++++|+|||+||++|+.+.|.|.++++++.+. ++.++.|+++.+.
T Consensus 9 v~~l~~~~f~~-~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~-~v~~~~vd~~~~~------------------- 67 (126)
T 1x5e_A 9 VRVITDENWRE-LLEGDWMIEFYAPWCPACQNLQPEWESFAEWGEDL-EVNIAKVDVTEQP------------------- 67 (126)
T ss_dssp EEECCTTTHHH-HTSSEEEEEEECSSCHHHHHHHHHHHHHHHHHGGG-TCEEEEEETTTCH-------------------
T ss_pred cEEecHHHHHH-HhCCCEEEEEECCCCHHHHHHhHHHHHHHHHhccC-CeEEEEEECcCCH-------------------
Confidence 33444444431 22333999999999999999999999999998754 4899999998763
Q ss_pred chhHHHHHHhcCCCCccEEEEECCCCcEEE
Q 008336 103 SETRDKLDELFKVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 103 ~~~~~~l~~~~~v~~~P~~~lid~~G~i~~ 132 (569)
.+++.|+|.++|+++++ ++|++..
T Consensus 68 -----~~~~~~~v~~~Pt~~~~-~~G~~~~ 91 (126)
T 1x5e_A 68 -----GLSGRFIINALPTIYHC-KDGEFRR 91 (126)
T ss_dssp -----HHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -----HHHHHcCCcccCEEEEE-eCCeEEE
Confidence 48899999999999999 8898643
No 298
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.36 E-value=1.8e-12 Score=110.37 Aligned_cols=71 Identities=25% Similarity=0.557 Sum_probs=62.4
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
.+++++|+||++||++|+.+.|.|.+++++++ ++.++.|++|.++ ++++.|+|
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~vd~~~~~-----------------------~~~~~~~v 85 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMAPVFADLAKKFP----NAVFLKVDVDELK-----------------------PIAEQFSV 85 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC----CcEEEEEECCCCH-----------------------HHHHHcCC
Confidence 37899999999999999999999999988875 3788999888764 48899999
Q ss_pred CCccEEEEECCCCcEEEcc
Q 008336 436 SGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~ 454 (569)
+++||++++ ++|+++.+.
T Consensus 86 ~~~Pt~~~~-~~G~~~~~~ 103 (122)
T 2vlu_A 86 EAMPTFLFM-KEGDVKDRV 103 (122)
T ss_dssp CSSSEEEEE-ETTEEEEEE
T ss_pred CcccEEEEE-eCCEEEEEE
Confidence 999999888 899998763
No 299
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.36 E-value=1.6e-12 Score=109.45 Aligned_cols=70 Identities=23% Similarity=0.515 Sum_probs=62.1
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008336 357 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 436 (569)
Q Consensus 357 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 436 (569)
||+++|+||++||++|+++.|.|.+++++++ ++.++.|++|.++ ++++.|+|+
T Consensus 30 ~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~----~v~~~~vd~~~~~-----------------------~l~~~~~v~ 82 (114)
T 2oe3_A 30 NDKLVIDFYATWCGPCKMMQPHLTKLIQAYP----DVRFVKCDVDESP-----------------------DIAKECEVT 82 (114)
T ss_dssp CSEEEEEEECTTCHHHHHTHHHHHHHHHHCT----TSEEEEEETTTCH-----------------------HHHHHTTCC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHCC----CCEEEEEECCCCH-----------------------HHHHHCCCC
Confidence 7999999999999999999999999988875 3788999888664 488999999
Q ss_pred CccEEEEECCCCcEEEcc
Q 008336 437 GIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 437 ~~Pt~~lid~~G~i~~~~ 454 (569)
++||++++ ++|+++.+.
T Consensus 83 ~~Pt~~~~-~~G~~~~~~ 99 (114)
T 2oe3_A 83 AMPTFVLG-KDGQLIGKI 99 (114)
T ss_dssp SBSEEEEE-ETTEEEEEE
T ss_pred cccEEEEE-eCCeEEEEE
Confidence 99999988 899998763
No 300
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.36 E-value=6.5e-13 Score=115.03 Aligned_cols=83 Identities=22% Similarity=0.444 Sum_probs=65.6
Q ss_pred eecCCCceeecCCC-CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCccccc
Q 008336 23 LIRSNGDQVKLDSL-KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPF 100 (569)
Q Consensus 23 ~~~~~g~~v~l~~~-~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~ 100 (569)
+..++++.+...-. .++ ++|+|||+||++|+.+.|.|.+++++++..+++.++.|+++...
T Consensus 9 v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~----------------- 71 (133)
T 2dj3_A 9 VKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATAND----------------- 71 (133)
T ss_dssp SEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSC-----------------
T ss_pred eEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCH-----------------
Confidence 34455655554433 478 99999999999999999999999999986446888888887542
Q ss_pred CCchhHHHHHHhcCCCCccEEEEECCCCc
Q 008336 101 SDSETRDKLDELFKVMGIPHLVILDENGK 129 (569)
Q Consensus 101 ~~~~~~~~l~~~~~v~~~P~~~lid~~G~ 129 (569)
.+++.|+|.++|++++++.+|+
T Consensus 72 -------~~~~~~~v~~~Pt~~~~~~g~~ 93 (133)
T 2dj3_A 72 -------ITNDQYKVEGFPTIYFAPSGDK 93 (133)
T ss_dssp -------CCCSSCCCSSSSEEEEECTTCT
T ss_pred -------HHHhhcCCCcCCEEEEEeCCCc
Confidence 3567899999999999987664
No 301
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.36 E-value=1.8e-12 Score=106.82 Aligned_cols=71 Identities=30% Similarity=0.647 Sum_probs=62.5
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
.+++++|+||++||++|+.+.|.|.+++++++ ++.++.|++|..+ ++++.|++
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~-----------------------~~~~~~~v 70 (104)
T 2vim_A 18 KGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP----EVEFAKVDVDQNE-----------------------EAAAKYSV 70 (104)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC----CCEEEEEeccCCH-----------------------HHHHHcCC
Confidence 48999999999999999999999999988875 4899999988664 48899999
Q ss_pred CCccEEEEECCCCcEEEcc
Q 008336 436 SGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~ 454 (569)
.++|+++++ ++|+++.+.
T Consensus 71 ~~~Pt~~~~-~~g~~~~~~ 88 (104)
T 2vim_A 71 TAMPTFVFI-KDGKEVDRF 88 (104)
T ss_dssp CSSSEEEEE-ETTEEEEEE
T ss_pred ccccEEEEE-eCCcEEEEE
Confidence 999999888 589988773
No 302
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.36 E-value=2.4e-12 Score=106.85 Aligned_cols=71 Identities=25% Similarity=0.544 Sum_probs=63.8
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008336 357 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 436 (569)
Q Consensus 357 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 436 (569)
+++++|+||++||++|+.+.|.|.+++++++++ +.++.|++|.++ .+++.|++.
T Consensus 18 ~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~v~~~~~~-----------------------~~~~~~~v~ 71 (109)
T 2yzu_A 18 HPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGK---LLVAKLDVDENP-----------------------KTAMRYRVM 71 (109)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTT---BEEEEEETTTCH-----------------------HHHHHTTCC
T ss_pred CCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCc---eEEEEEECCCCH-----------------------hHHHhCCCC
Confidence 789999999999999999999999999998754 899999988764 488999999
Q ss_pred CccEEEEECCCCcEEEcc
Q 008336 437 GIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 437 ~~Pt~~lid~~G~i~~~~ 454 (569)
++|+++++ ++|+++.+.
T Consensus 72 ~~Pt~~~~-~~g~~~~~~ 88 (109)
T 2yzu_A 72 SIPTVILF-KDGQPVEVL 88 (109)
T ss_dssp SSSEEEEE-ETTEEEEEE
T ss_pred cCCEEEEE-eCCcEeeeE
Confidence 99999999 899988763
No 303
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.35 E-value=1.6e-12 Score=113.83 Aligned_cols=71 Identities=21% Similarity=0.343 Sum_probs=64.2
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008336 357 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 436 (569)
Q Consensus 357 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 436 (569)
++++||+||++||++|+.+.|.|.+++++++++ +.++.|++|..+ .+++.|+|+
T Consensus 24 ~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~---v~~~~vd~~~~~-----------------------~l~~~~~v~ 77 (140)
T 3hz4_A 24 KKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSS---AVFGRINIATNP-----------------------WTAEKYGVQ 77 (140)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---SEEEEEETTTCH-----------------------HHHHHHTCC
T ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhCCc---eEEEEEECCcCH-----------------------hHHHHCCCC
Confidence 789999999999999999999999999999764 899999988765 489999999
Q ss_pred CccEEEEECCCCcEEEcc
Q 008336 437 GIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 437 ~~Pt~~lid~~G~i~~~~ 454 (569)
++||++++ ++|+++.+.
T Consensus 78 ~~Pt~~~~-~~G~~~~~~ 94 (140)
T 3hz4_A 78 GTPTFKFF-CHGRPVWEQ 94 (140)
T ss_dssp EESEEEEE-ETTEEEEEE
T ss_pred cCCEEEEE-eCCcEEEEE
Confidence 99999999 789988763
No 304
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.04 E-value=6.8e-14 Score=120.78 Aligned_cols=83 Identities=22% Similarity=0.518 Sum_probs=66.4
Q ss_pred CCceecccCCCCEEEEEEecCCChhHHhhhHHH---HHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCc
Q 008336 347 GGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKL---IDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGD 423 (569)
Q Consensus 347 g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l---~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~ 423 (569)
.+.+.+....||++||+||++||++|+.+.|.+ .++.+.++.+ +.++.|+++.+.
T Consensus 9 ~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~---~~~~~vd~~~~~------------------- 66 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEAR---FVVASVSVDTPE------------------- 66 (130)
Confidence 455666666799999999999999999999999 8888777643 777777765332
Q ss_pred hhhHHHHHhcCCCCccEEEEECC-CCcE--EEc
Q 008336 424 ARKASLSRKFKVSGIPMLVAIGP-SGRT--ITK 453 (569)
Q Consensus 424 d~~~~l~~~~~v~~~Pt~~lid~-~G~i--~~~ 453 (569)
...+++.|+|.++||++++|+ +|++ +.+
T Consensus 67 --~~~~~~~~~v~~~Pt~~~~d~~~G~~~~~~~ 97 (130)
T 2lst_A 67 --GQELARRYRVPGTPTFVFLVPKAGAWEEVGR 97 (130)
Confidence 235889999999999999996 5888 665
No 305
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.35 E-value=2.2e-12 Score=108.14 Aligned_cols=70 Identities=17% Similarity=0.456 Sum_probs=61.8
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008336 357 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 436 (569)
Q Consensus 357 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 436 (569)
+|+++|+||++||++|+++.|.|.+++++++ ++.++.|+++..+ .+++.|+|.
T Consensus 26 ~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~----~v~~~~vd~~~~~-----------------------~~~~~~~v~ 78 (112)
T 1syr_A 26 NELVIVDFFAEWCGPCKRIAPFYEECSKTYT----KMVFIKVDVDEVS-----------------------EVTEKENIT 78 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTTH-----------------------HHHHHTTCC
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcC----CCEEEEEECCCCH-----------------------HHHHHcCCC
Confidence 8999999999999999999999999988875 3899999888664 488999999
Q ss_pred CccEEEEECCCCcEEEcc
Q 008336 437 GIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 437 ~~Pt~~lid~~G~i~~~~ 454 (569)
++||++++ ++|+++.+.
T Consensus 79 ~~Pt~~~~-~~G~~~~~~ 95 (112)
T 1syr_A 79 SMPTFKVY-KNGSSVDTL 95 (112)
T ss_dssp SSSEEEEE-ETTEEEEEE
T ss_pred cccEEEEE-ECCcEEEEE
Confidence 99998888 699998763
No 306
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.35 E-value=1e-12 Score=111.86 Aligned_cols=72 Identities=18% Similarity=0.449 Sum_probs=63.8
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
.+++++|+||++||++|+.+.|.|.+++++++++ ++.++.|++|..+ ++++.|+|
T Consensus 32 ~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~--~v~~~~vd~d~~~-----------------------~~~~~~~v 86 (121)
T 2j23_A 32 GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGD--KVGFYKVDVDEQS-----------------------QIAQEVGI 86 (121)
T ss_dssp SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHH--HSEEEEEETTTCH-----------------------HHHHHHTC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCC--cEEEEEEECcCCH-----------------------HHHHHcCC
Confidence 4789999999999999999999999999888764 4889999988764 48899999
Q ss_pred CCccEEEEECCCCcEEEc
Q 008336 436 SGIPMLVAIGPSGRTITK 453 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~ 453 (569)
.++||++++ ++|+++.+
T Consensus 87 ~~~Pt~~~~-~~G~~~~~ 103 (121)
T 2j23_A 87 RAMPTFVFF-KNGQKIDT 103 (121)
T ss_dssp CSSSEEEEE-ETTEEEEE
T ss_pred CcccEEEEE-ECCeEEee
Confidence 999999999 69999877
No 307
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.35 E-value=1.3e-12 Score=110.71 Aligned_cols=71 Identities=21% Similarity=0.399 Sum_probs=62.6
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008336 357 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 436 (569)
Q Consensus 357 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 436 (569)
++++||+||++||++|+.+.|.|.++++++ . ++.++.|++|.+. ++++.|+|.
T Consensus 23 ~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~---~v~~~~vd~~~~~-----------------------~~~~~~~i~ 75 (118)
T 2f51_A 23 PGLVLVDFFATWCGPCQRLGQILPSIAEAN-K---DVTFIKVDVDKNG-----------------------NAADAYGVS 75 (118)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHC-T---TSEEEEEETTTCH-----------------------HHHHHTTCC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHC-C---CeEEEEEECCCCH-----------------------HHHHhcCCC
Confidence 789999999999999999999999999888 3 4899999988764 488999999
Q ss_pred CccEEEEECC---CCcEEEcc
Q 008336 437 GIPMLVAIGP---SGRTITKE 454 (569)
Q Consensus 437 ~~Pt~~lid~---~G~i~~~~ 454 (569)
++||+++++. +|+++.+.
T Consensus 76 ~~Pt~~~~~~~~~~G~~~~~~ 96 (118)
T 2f51_A 76 SIPALFFVKKEGNEIKTLDQF 96 (118)
T ss_dssp SSSEEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEEeCCCCcceEEEee
Confidence 9999999965 38888873
No 308
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.35 E-value=5.3e-12 Score=104.09 Aligned_cols=72 Identities=18% Similarity=0.487 Sum_probs=63.7
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
.+++++|+||++||++|+.+.|.|.+++++++++ +.++.|++|.++ .+++.|+|
T Consensus 17 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~-----------------------~~~~~~~v 70 (105)
T 1fb6_A 17 SEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGK---IAVYKLNTDEAP-----------------------GIATQYNI 70 (105)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred CCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCc---eEEEEEcCcchH-----------------------HHHHhCCC
Confidence 3789999999999999999999999999998754 889999888664 48899999
Q ss_pred CCccEEEEECCCCcEEEcc
Q 008336 436 SGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~ 454 (569)
.++||++++ ++|+++.+.
T Consensus 71 ~~~Pt~~~~-~~g~~~~~~ 88 (105)
T 1fb6_A 71 RSIPTVLFF-KNGERKESI 88 (105)
T ss_dssp CSSSEEEEE-ETTEEEEEE
T ss_pred CcccEEEEE-eCCeEEEEE
Confidence 999999888 799998764
No 309
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.34 E-value=2.6e-12 Score=108.49 Aligned_cols=70 Identities=21% Similarity=0.475 Sum_probs=61.5
Q ss_pred CCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhc
Q 008336 35 SLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELF 113 (569)
Q Consensus 35 ~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 113 (569)
+.+++ ++|+|||+||++|+.+.|.|.+++++++ ++.++.|++|... .+++.|
T Consensus 28 ~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---~v~~~~vd~d~~~------------------------~l~~~~ 80 (116)
T 3qfa_C 28 AAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYS---NVIFLEVDVDDCQ------------------------DVASEC 80 (116)
T ss_dssp HHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCT---TSEEEEEETTTTH------------------------HHHHHT
T ss_pred hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CCEEEEEECCCCH------------------------HHHHHc
Confidence 34688 9999999999999999999999999875 3889999998763 488999
Q ss_pred CCCCccEEEEECCCCcEEE
Q 008336 114 KVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 114 ~v~~~P~~~lid~~G~i~~ 132 (569)
+|.++|+++++ ++|+++.
T Consensus 81 ~v~~~Pt~~~~-~~G~~~~ 98 (116)
T 3qfa_C 81 EVKSMPTFQFF-KKGQKVG 98 (116)
T ss_dssp TCCSSSEEEEE-SSSSEEE
T ss_pred CCccccEEEEE-eCCeEEE
Confidence 99999999999 7888775
No 310
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.34 E-value=1.6e-12 Score=112.59 Aligned_cols=83 Identities=20% Similarity=0.381 Sum_probs=63.1
Q ss_pred cCCCCceecccC-CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccC
Q 008336 344 GKNGGKVPVSDL-AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFG 422 (569)
Q Consensus 344 ~~~g~~v~l~~~-~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~ 422 (569)
..++..+..... .+++++|+||++||++|+.+.|.|.+++++++.+ .++.++.|+++...
T Consensus 11 ~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~-~~~~~~~vd~~~~~------------------ 71 (133)
T 2dj3_A 11 VVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQ-KDLVIAKMDATAND------------------ 71 (133)
T ss_dssp ECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTS-SSEEEEEECTTTSC------------------
T ss_pred EEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCC-CCEEEEEecCCcCH------------------
Confidence 344444443322 4899999999999999999999999999999742 24777777666442
Q ss_pred chhhHHHHHhcCCCCccEEEEECCCCcE
Q 008336 423 DARKASLSRKFKVSGIPMLVAIGPSGRT 450 (569)
Q Consensus 423 ~d~~~~l~~~~~v~~~Pt~~lid~~G~i 450 (569)
.+++.|+|+++||+++++.+|++
T Consensus 72 -----~~~~~~~v~~~Pt~~~~~~g~~~ 94 (133)
T 2dj3_A 72 -----ITNDQYKVEGFPTIYFAPSGDKK 94 (133)
T ss_dssp -----CCCSSCCCSSSSEEEEECTTCTT
T ss_pred -----HHHhhcCCCcCCEEEEEeCCCcc
Confidence 35678999999999999876653
No 311
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.34 E-value=3e-12 Score=106.80 Aligned_cols=74 Identities=19% Similarity=0.466 Sum_probs=63.3
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008336 357 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 436 (569)
Q Consensus 357 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 436 (569)
+++++|+||++||++|+.+.|.|.++++++.....++.++.|+++..+ ++++.|+|+
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-----------------------~l~~~~~v~ 77 (111)
T 3uvt_A 21 EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAER-----------------------NICSKYSVR 77 (111)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCH-----------------------HHHHHTTCC
T ss_pred CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccH-----------------------hHHHhcCCC
Confidence 789999999999999999999999998887644346888888888664 489999999
Q ss_pred CccEEEEECCCCcEEEcc
Q 008336 437 GIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 437 ~~Pt~~lid~~G~i~~~~ 454 (569)
++||++++ ++|+++.+.
T Consensus 78 ~~Pt~~~~-~~g~~~~~~ 94 (111)
T 3uvt_A 78 GYPTLLLF-RGGKKVSEH 94 (111)
T ss_dssp SSSEEEEE-ETTEEEEEE
T ss_pred cccEEEEE-eCCcEEEec
Confidence 99999999 789887763
No 312
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.34 E-value=3.5e-12 Score=105.97 Aligned_cols=81 Identities=22% Similarity=0.429 Sum_probs=66.8
Q ss_pred cCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCc
Q 008336 25 RSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDS 103 (569)
Q Consensus 25 ~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~ 103 (569)
.++++.+...-.+++ ++|+||++||++|+.+.|.+.++++.+++ ++.++.|+++..+
T Consensus 8 ~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~-------------------- 65 (109)
T 3tco_A 8 VLTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG--KAVFGRLNVDENQ-------------------- 65 (109)
T ss_dssp ECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTCH--------------------
T ss_pred EecHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC--CceEEEEccccCH--------------------
Confidence 344444443333578 99999999999999999999999999874 4889999998764
Q ss_pred hhHHHHHHhcCCCCccEEEEECCCCcEEE
Q 008336 104 ETRDKLDELFKVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 104 ~~~~~l~~~~~v~~~P~~~lid~~G~i~~ 132 (569)
.+++.|++.++|+++++ ++|+++.
T Consensus 66 ----~~~~~~~i~~~Pt~~~~-~~g~~~~ 89 (109)
T 3tco_A 66 ----KIADKYSVLNIPTTLIF-VNGQLVD 89 (109)
T ss_dssp ----HHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ----HHHHhcCcccCCEEEEE-cCCcEEE
Confidence 48899999999999999 8898875
No 313
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.34 E-value=2.5e-12 Score=105.69 Aligned_cols=71 Identities=17% Similarity=0.466 Sum_probs=62.7
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
.+++++|+||++||++|+.+.|.|.++++.+++ +.++.|++|.+. ++++.|++
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~----~~~~~v~~~~~~-----------------------~~~~~~~v 67 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ----VGFGKLNSDENP-----------------------DIAARYGV 67 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred cCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC----ceEEEEECCCCH-----------------------HHHHhCCc
Confidence 378999999999999999999999999888753 889999888664 48899999
Q ss_pred CCccEEEEECCCCcEEEcc
Q 008336 436 SGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~ 454 (569)
+++|+++++ ++|+++.+.
T Consensus 68 ~~~Pt~~~~-~~g~~~~~~ 85 (104)
T 2e0q_A 68 MSLPTVIFF-KDGEPVDEI 85 (104)
T ss_dssp CSSCEEEEE-ETTEEEEEE
T ss_pred cccCEEEEE-ECCeEhhhc
Confidence 999999999 899998763
No 314
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.33 E-value=3.2e-12 Score=109.95 Aligned_cols=90 Identities=29% Similarity=0.509 Sum_probs=68.9
Q ss_pred cCccCCceecCCCceeecCC-CCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhC
Q 008336 16 SSSARDFLIRSNGDQVKLDS-LKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKM 93 (569)
Q Consensus 16 g~~~pdf~~~~~g~~v~l~~-~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~ 93 (569)
+..+++-+..++++.+...- -.++ ++|+||++||++|+.+.|.+.++++++++ ++.++.|+++.+.
T Consensus 17 ~~~m~~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~~~~~---------- 84 (128)
T 2o8v_B 17 RGSHSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQG--KLTVAKLNIDQNP---------- 84 (128)
T ss_dssp ----CCCSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT--TEEEEEEETTTCC----------
T ss_pred ccccccccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CeEEEEEECCCCH----------
Confidence 44444444445555554322 3577 99999999999999999999999999864 4999999998653
Q ss_pred CCcccccCCchhHHHHHHhcCCCCccEEEEECCCCcEEE
Q 008336 94 PWLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~ 132 (569)
.+++.|+|.++|+++++ ++|+++.
T Consensus 85 --------------~l~~~~~v~~~Pt~~~~-~~G~~~~ 108 (128)
T 2o8v_B 85 --------------GTAPKYGIRGIPTLLLF-KNGEVAA 108 (128)
T ss_dssp --------------TTSGGGTCCSSSEEEEE-ETTEEEE
T ss_pred --------------HHHHHcCCCccCEEEEE-eCCEEEE
Confidence 37789999999999999 8998875
No 315
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.33 E-value=2.7e-12 Score=108.40 Aligned_cols=70 Identities=24% Similarity=0.582 Sum_probs=62.2
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008336 357 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 436 (569)
Q Consensus 357 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 436 (569)
+++++|+||++||++|+.+.|.|.+++++++ ++.++.|++|..+ .+++.|+|+
T Consensus 28 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~-----------------------~~~~~~~v~ 80 (118)
T 2vm1_A 28 GKLVIIDFTASWCGPCRVIAPVFAEYAKKFP----GAIFLKVDVDELK-----------------------DVAEAYNVE 80 (118)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTSH-----------------------HHHHHTTCC
T ss_pred CCEEEEEEECCCCHhHHHHhHHHHHHHHHCC----CcEEEEEEcccCH-----------------------HHHHHcCCC
Confidence 7899999999999999999999999998875 4889999888654 488999999
Q ss_pred CccEEEEECCCCcEEEcc
Q 008336 437 GIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 437 ~~Pt~~lid~~G~i~~~~ 454 (569)
++|+++++ ++|+++.+.
T Consensus 81 ~~Pt~~~~-~~g~~~~~~ 97 (118)
T 2vm1_A 81 AMPTFLFI-KDGEKVDSV 97 (118)
T ss_dssp SBSEEEEE-ETTEEEEEE
T ss_pred cCcEEEEE-eCCeEEEEe
Confidence 99999999 799998763
No 316
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.33 E-value=4.4e-12 Score=106.26 Aligned_cols=69 Identities=29% Similarity=0.644 Sum_probs=62.0
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
.++ ++|+||++||++|+.+.|.|.++++++++ ++.++.|+++.+. .+++.|+|
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~--~v~~~~vd~~~~~------------------------~l~~~~~v 69 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD--KLKIVKIDVDENQ------------------------ETAGKYGV 69 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT--TCEEEEEETTTCC------------------------SHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC--CcEEEEEECCCCH------------------------HHHHHcCC
Confidence 688 99999999999999999999999999874 4899999998652 48899999
Q ss_pred CCccEEEEECCCCcEEE
Q 008336 116 MGIPHLVILDENGKVLS 132 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~ 132 (569)
.++|+++++ ++|+++.
T Consensus 70 ~~~Pt~~~~-~~G~~~~ 85 (112)
T 2voc_A 70 MSIPTLLVL-KDGEVVE 85 (112)
T ss_dssp CSBSEEEEE-ETTEEEE
T ss_pred CcccEEEEE-eCCEEEE
Confidence 999999999 8999875
No 317
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.33 E-value=1.5e-12 Score=116.93 Aligned_cols=116 Identities=14% Similarity=0.223 Sum_probs=96.4
Q ss_pred cCCccceecCCC--Cceeccc-CCCCEEEEEEe-cCCChhHHhhhHHHHHHHHHHhhcCCCeE-EEEEeCCCChhHHHHH
Q 008336 336 SGDLDFVVGKNG--GKVPVSD-LAGKTILLYFS-AHWCPPCRAFLPKLIDAYKKIKERNESLE-VVFISSDRDQTSFDEF 410 (569)
Q Consensus 336 ~~~~~f~~~~~g--~~v~l~~-~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~-vv~is~d~~~~~~~~~ 410 (569)
...|+|.+..+| ++++|++ ++||++||+|| +.|||.|..+++.+++.+.+++++ +++ |++||+|. +...++|
T Consensus 18 d~aPdf~l~~~g~~~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~--gv~~VigIS~D~-~~~~~~w 94 (171)
T 2xhf_A 18 DIIPDVLVYEDVPSKSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEE--GYHTIACIAVND-PFVMAAW 94 (171)
T ss_dssp CBCCCCEEECSSTTCEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHT--TCCEEEEEESSC-HHHHHHH
T ss_pred CCCCCeEEecCCCCcEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHC--CCCEEEEEeCCC-HHHHHHH
Confidence 346899884444 8999999 59999999998 789999999999999999999876 685 99999994 4677778
Q ss_pred HhcCCC-cccccCchhhHHHHHhcCCC-----------CccEEEEECCCCcEEEccc
Q 008336 411 FKGMPW-LALPFGDARKASLSRKFKVS-----------GIPMLVAIGPSGRTITKEA 455 (569)
Q Consensus 411 ~~~~~~-~~~~~~~d~~~~l~~~~~v~-----------~~Pt~~lid~~G~i~~~~~ 455 (569)
.+..+. ..+|++.|.+.++++.||+. ....+|||| +|+|++...
T Consensus 95 ~~~~~~~~~f~lLSD~~~~~a~ayGv~~~~~~~g~g~~~~R~tfvId-dG~V~~~~v 150 (171)
T 2xhf_A 95 GKTVDPEHKIRMLADMHGEFTRALGTELDSSKMLGNNRSRRYAMLID-DNKIRSVST 150 (171)
T ss_dssp HHHHCTTCCSEEEECTTSHHHHHHTCBCCCHHHHSSCCBCCEEEEEE-TTEEEEEEE
T ss_pred HHhcCCCCCeEEEEeCCchHHHHhCCceeccccCCCcceEEEEEEEe-CCEEEEEEE
Confidence 776663 27899999999999999974 246789998 999999853
No 318
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.33 E-value=1.3e-12 Score=122.73 Aligned_cols=105 Identities=15% Similarity=0.192 Sum_probs=79.6
Q ss_pred cCCCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCc
Q 008336 344 GKNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGD 423 (569)
Q Consensus 344 ~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~ 423 (569)
+.++..+......++++||+||++||++|+.+.|.|.+++++++++ +.++.|+++..+
T Consensus 101 ~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~---v~~~~vd~~~~~------------------- 158 (210)
T 3apq_A 101 TLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGL---LRIGAVNCGDDR------------------- 158 (210)
T ss_dssp ECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTT---BEEEEEETTTCH-------------------
T ss_pred EecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCc---eEEEEEECCccH-------------------
Confidence 3444444333345899999999999999999999999999998754 899999988764
Q ss_pred hhhHHHHHhcCCCCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhhcCCC
Q 008336 424 ARKASLSRKFKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWP 489 (569)
Q Consensus 424 d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~~~~~ 489 (569)
.+++.|+|.++||++++ ++|+++.+..+ ....++|.+.|++++....
T Consensus 159 ----~l~~~~~v~~~Pt~~~~-~~G~~~~~~~G--------------~~~~~~l~~~i~~~l~~~~ 205 (210)
T 3apq_A 159 ----MLCRMKGVNSYPSLFIF-RSGMAAVKYNG--------------DRSKESLVAFAMQHVRSTV 205 (210)
T ss_dssp ----HHHHHTTCCSSSEEEEE-CTTSCCEECCS--------------CCCHHHHHHHHHHHHHCCS
T ss_pred ----HHHHHcCCCcCCeEEEE-ECCCceeEecC--------------CCCHHHHHHHHHHhCcccc
Confidence 48899999999999999 89998766321 1123456677777665544
No 319
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.32 E-value=2.4e-12 Score=107.86 Aligned_cols=71 Identities=24% Similarity=0.630 Sum_probs=62.9
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
.+++++|+||++||++|+.+.|.|++++++++ ++.++.|++|..+ .+++.|++
T Consensus 25 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~v~~~~v~~~~~~-----------------------~~~~~~~v 77 (113)
T 1ti3_A 25 SQKLIVVDFTASWCPPCKMIAPIFAELAKKFP----NVTFLKVDVDELK-----------------------AVAEEWNV 77 (113)
T ss_dssp SSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS----SEEEEEEETTTCH-----------------------HHHHHHHC
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC----CcEEEEEEccccH-----------------------HHHHhCCC
Confidence 48999999999999999999999999988875 4899999888664 48899999
Q ss_pred CCccEEEEECCCCcEEEcc
Q 008336 436 SGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~ 454 (569)
.++|+++++ ++|+++.+.
T Consensus 78 ~~~Pt~~~~-~~G~~~~~~ 95 (113)
T 1ti3_A 78 EAMPTFIFL-KDGKLVDKT 95 (113)
T ss_dssp SSTTEEEEE-ETTEEEEEE
T ss_pred CcccEEEEE-eCCEEEEEE
Confidence 999999999 799998774
No 320
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.32 E-value=3.4e-12 Score=108.33 Aligned_cols=72 Identities=28% Similarity=0.578 Sum_probs=63.6
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
.+++++|+||++||++|+.+.|.|.+++++++.+ +.++.|+++.++ .+++.|+|
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~-----------------------~~~~~~~i 82 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAPVLEEIATERATD---LTVAKLDVDTNP-----------------------ETARNFQV 82 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC---eEEEEEECCCCH-----------------------HHHHhcCC
Confidence 3789999999999999999999999999998654 899999988664 48899999
Q ss_pred CCccEEEEECCCCcEEEcc
Q 008336 436 SGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~ 454 (569)
.++||++++ ++|+++.+.
T Consensus 83 ~~~Pt~~~~-~~g~~~~~~ 100 (121)
T 2i1u_A 83 VSIPTLILF-KDGQPVKRI 100 (121)
T ss_dssp CSSSEEEEE-ETTEEEEEE
T ss_pred CcCCEEEEE-ECCEEEEEe
Confidence 999999999 699998763
No 321
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.32 E-value=1e-11 Score=103.00 Aligned_cols=81 Identities=30% Similarity=0.566 Sum_probs=65.6
Q ss_pred cCCCceeecC-CCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCC
Q 008336 25 RSNGDQVKLD-SLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSD 102 (569)
Q Consensus 25 ~~~g~~v~l~-~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~ 102 (569)
.++++.+... .-.++ ++|+||++||++|+.+.|.+.++++++.. ++.++.|+++.+.
T Consensus 6 ~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~------------------- 64 (108)
T 2trx_A 6 HLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNP------------------- 64 (108)
T ss_dssp ECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCT-------------------
T ss_pred ecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC--CcEEEEEECCCCH-------------------
Confidence 3444444322 22577 99999999999999999999999999864 4999999998653
Q ss_pred chhHHHHHHhcCCCCccEEEEECCCCcEEE
Q 008336 103 SETRDKLDELFKVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 103 ~~~~~~l~~~~~v~~~P~~~lid~~G~i~~ 132 (569)
.+++.|++.++|+++++ ++|+++.
T Consensus 65 -----~~~~~~~v~~~Pt~~~~-~~G~~~~ 88 (108)
T 2trx_A 65 -----GTAPKYGIRGIPTLLLF-KNGEVAA 88 (108)
T ss_dssp -----THHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -----HHHHHcCCcccCEEEEE-eCCEEEE
Confidence 47889999999999999 7898875
No 322
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.32 E-value=3e-12 Score=105.76 Aligned_cols=69 Identities=28% Similarity=0.617 Sum_probs=61.3
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
.++ ++|+||++||++|+.+.|.+.++++++.+ ++.++.|+++.+. .+++.|++
T Consensus 16 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~~~~------------------------~~~~~~~v 69 (105)
T 1nsw_A 16 GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD--KVTVAKLNVDENP------------------------ETTSQFGI 69 (105)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT--TCEEEEEETTTCH------------------------HHHHHTTC
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CcEEEEEECcCCH------------------------HHHHHcCC
Confidence 577 99999999999999999999999999864 4899999998764 48899999
Q ss_pred CCccEEEEECCCCcEEE
Q 008336 116 MGIPHLVILDENGKVLS 132 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~ 132 (569)
.++|+++++ ++|+++.
T Consensus 70 ~~~Pt~~~~-~~G~~~~ 85 (105)
T 1nsw_A 70 MSIPTLILF-KGGRPVK 85 (105)
T ss_dssp CSSSEEEEE-ETTEEEE
T ss_pred ccccEEEEE-eCCeEEE
Confidence 999999999 8898765
No 323
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.31 E-value=2.7e-12 Score=113.48 Aligned_cols=69 Identities=23% Similarity=0.340 Sum_probs=60.4
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
.++ ++|+|||+||++|+.+.|.|.++++++.+ .+.++.|++|... .+++.|+|
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~--~~~~~~vd~d~~~------------------------~l~~~~~v 75 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSK--MAAIYLVDVDQTA------------------------VYTQYFDI 75 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTT--TEEEEEEETTTCC------------------------HHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHccC--ceEEEEEECCcCH------------------------HHHHHcCC
Confidence 578 99999999999999999999999998864 3899999998663 48899999
Q ss_pred CCccEEEEECCCCcEEE
Q 008336 116 MGIPHLVILDENGKVLS 132 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~ 132 (569)
.++|+++++ ++|+++.
T Consensus 76 ~~~Pt~~~~-~~G~~v~ 91 (149)
T 3gix_A 76 SYIPSTVFF-FNGQHMK 91 (149)
T ss_dssp CSSSEEEEE-ETTEEEE
T ss_pred CccCeEEEE-ECCeEEE
Confidence 999999955 7898873
No 324
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.31 E-value=8e-12 Score=109.23 Aligned_cols=71 Identities=30% Similarity=0.544 Sum_probs=62.2
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008336 357 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 436 (569)
Q Consensus 357 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 436 (569)
++.++|+||++||++|+.+.|.|.+++++++++ +.++.|+++.+. .+++.|+|.
T Consensus 50 ~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~---v~~~~vd~~~~~-----------------------~l~~~~~v~ 103 (140)
T 1v98_A 50 APLTLVDFFAPWCGPCRLVSPILEELARDHAGR---LKVVKVNVDEHP-----------------------GLAARYGVR 103 (140)
T ss_dssp CCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---EEEEEEETTTCH-----------------------HHHHHTTCC
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHHccCc---eEEEEEECCCCH-----------------------HHHHHCCCC
Confidence 333999999999999999999999999998754 899999988764 488999999
Q ss_pred CccEEEEECCCCcEEEcc
Q 008336 437 GIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 437 ~~Pt~~lid~~G~i~~~~ 454 (569)
++||++++ ++|+++.+.
T Consensus 104 ~~Pt~~~~-~~G~~~~~~ 120 (140)
T 1v98_A 104 SVPTLVLF-RRGAPVATW 120 (140)
T ss_dssp SSSEEEEE-ETTEEEEEE
T ss_pred ccCEEEEE-eCCcEEEEE
Confidence 99999999 799998763
No 325
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.31 E-value=3.5e-12 Score=105.48 Aligned_cols=68 Identities=18% Similarity=0.317 Sum_probs=53.2
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
.++ ++|+|||+||++|+.+.|.+.++++++. ++.++.|+++.++ .+++.|+|
T Consensus 17 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~---~~~~~~vd~~~~~------------------------~l~~~~~v 69 (105)
T 4euy_A 17 EQQLVLLFIKTENCGVCDVMLRKVNYVLENYN---YVEKIEILLQDMQ------------------------EIAGRYAV 69 (105)
T ss_dssp CSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT---TEEEEEEEECCC---------------------------------
T ss_pred cCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC---CceEEEEECCCCH------------------------HHHHhcCC
Confidence 577 9999999999999999999999999883 4999999998764 48889999
Q ss_pred CCccEEEEECCCCcEEE
Q 008336 116 MGIPHLVILDENGKVLS 132 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~ 132 (569)
.++|+++++ ++|+++.
T Consensus 70 ~~~Pt~~~~-~~G~~~~ 85 (105)
T 4euy_A 70 FTGPTVLLF-YNGKEIL 85 (105)
T ss_dssp CCCCEEEEE-ETTEEEE
T ss_pred CCCCEEEEE-eCCeEEE
Confidence 999999999 5898875
No 326
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.31 E-value=2.4e-12 Score=110.04 Aligned_cols=69 Identities=20% Similarity=0.324 Sum_probs=62.1
Q ss_pred Cc-EEEEEecCCC--HhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcC
Q 008336 38 GK-IGLYFSASWC--GPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFK 114 (569)
Q Consensus 38 gk-vlv~F~a~wC--~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 114 (569)
++ +||+|||+|| ++|+.+.|.|.+++++|.. ++.++.|++|.++ .++..|+
T Consensus 33 ~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~--~v~~~KVdvDe~~------------------------~la~~yg 86 (137)
T 2qsi_A 33 GKIVVLFFRGDAVRFPEAADLAVVLPELINAFPG--RLVAAEVAAEAER------------------------GLMARFG 86 (137)
T ss_dssp SSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTT--TEEEEEECGGGHH------------------------HHHHHHT
T ss_pred CCcEEEEEeCCccCCCchhhHHhHHHHHHHHccC--CcEEEEEECCCCH------------------------HHHHHcC
Confidence 45 9999999999 9999999999999999864 5999999998664 5999999
Q ss_pred CCCccEEEEECCCCcEEEc
Q 008336 115 VMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 115 v~~~P~~~lid~~G~i~~~ 133 (569)
|+++||++++ ++|+.+.+
T Consensus 87 V~siPTlilF-kdG~~v~~ 104 (137)
T 2qsi_A 87 VAVCPSLAVV-QPERTLGV 104 (137)
T ss_dssp CCSSSEEEEE-ECCEEEEE
T ss_pred CccCCEEEEE-ECCEEEEE
Confidence 9999999999 89998874
No 327
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.31 E-value=5.6e-12 Score=114.68 Aligned_cols=141 Identities=13% Similarity=0.250 Sum_probs=104.4
Q ss_pred CCcccee-c--C---------CC----Cceeccc-CCCCEEEEEEe-cCCChhHH-hhhHHHHHHHHHH-hhcCCCe-EE
Q 008336 337 GDLDFVV-G--K---------NG----GKVPVSD-LAGKTILLYFS-AHWCPPCR-AFLPKLIDAYKKI-KERNESL-EV 395 (569)
Q Consensus 337 ~~~~f~~-~--~---------~g----~~v~l~~-~~gk~vll~F~-a~wC~~C~-~~~~~l~~l~~~~-~~~~~~~-~v 395 (569)
..|+|.+ + . +| +.+++++ ++||++||+|| +.|||.|. .+++.+++.+.++ ++. ++ .|
T Consensus 6 ~aPdf~l~~~~~~~~~~~~~~~G~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~--g~~~V 83 (182)
T 1xiy_A 6 LIPNVKVMIDVRNMNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKEN--NFDDI 83 (182)
T ss_dssp BCCCCEEEEEHHHHTC--------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTS--CCSEE
T ss_pred CCCCeEEEcccccccccccccCCCccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhC--CCcEE
Confidence 4588887 5 3 67 7999998 69999999888 78999999 9999999999999 776 67 49
Q ss_pred EEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCC------C-----ccEEEEECCCCcEEEccchhhHhhcCC
Q 008336 396 VFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS------G-----IPMLVAIGPSGRTITKEARDMIAVHGA 464 (569)
Q Consensus 396 v~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~------~-----~Pt~~lid~~G~i~~~~~~~~~~~~g~ 464 (569)
++||+| ++...++|.+.++.-.||++.|.+.++++.||+. + .+.+|||| +|+|++........ -+.
T Consensus 84 ~gvS~D-~~~~~~~~~~~~~~~~f~lLsD~~~~~a~~yGv~~~~~~~G~g~~~~R~tfvId-dG~V~~~~v~~~~~-~~~ 160 (182)
T 1xiy_A 84 YCITNN-DIYVLKSWFKSMDIKKIKYISDGNSSFTDSMNMLVDKSNFFMGMRPWRFVAIVE-NNILVKMFQEKDKQ-HNI 160 (182)
T ss_dssp EEEESS-CHHHHHHHHHHTTCCSSEEEECTTSHHHHHTTCEEECGGGTCCEEECCEEEEEE-TTEEEEEEECSSCC-TTC
T ss_pred EEEeCC-CHHHHHHHHHHcCCCCceEEEeCchHHHHHhCCceeccccCCCCceEEEEEEEc-CCEEEEEEEeCCcc-ccc
Confidence 999999 4467788888777326999999999999999973 2 57889998 99999985321000 000
Q ss_pred CCCCCCHHHHHHHHHHhh
Q 008336 465 EAYPFTEERMKEIDGQYN 482 (569)
Q Consensus 465 ~~~p~~~~~~~~l~~~l~ 482 (569)
+.-|+.....+++.+.|+
T Consensus 161 ~~~~~~~~~~~~vL~~L~ 178 (182)
T 1xiy_A 161 QTDPYDISTVNNVKEFLK 178 (182)
T ss_dssp SSCCCSTTSHHHHHHHHH
T ss_pred ccCcccCCCHHHHHHHHH
Confidence 011233456666766665
No 328
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.31 E-value=7e-12 Score=104.52 Aligned_cols=70 Identities=23% Similarity=0.470 Sum_probs=60.8
Q ss_pred Cc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCC-CCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 38 GK-IGLYFSASWCGPCQRFTPILAEVYNELSRQ-GDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 38 gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~-g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
++ ++|+||++||++|+.+.|.+.++++++... ..+.++.|+++... .+++.|+|
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~------------------------~l~~~~~v 76 (111)
T 3uvt_A 21 EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAER------------------------NICSKYSV 76 (111)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCH------------------------HHHHHTTC
T ss_pred CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccH------------------------hHHHhcCC
Confidence 77 999999999999999999999999987654 35899999998764 48899999
Q ss_pred CCccEEEEECCCCcEEE
Q 008336 116 MGIPHLVILDENGKVLS 132 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~ 132 (569)
.++|+++++ ++|+++.
T Consensus 77 ~~~Pt~~~~-~~g~~~~ 92 (111)
T 3uvt_A 77 RGYPTLLLF-RGGKKVS 92 (111)
T ss_dssp CSSSEEEEE-ETTEEEE
T ss_pred CcccEEEEE-eCCcEEE
Confidence 999999998 6787764
No 329
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.31 E-value=4.9e-12 Score=119.95 Aligned_cols=93 Identities=23% Similarity=0.463 Sum_probs=74.4
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
.+|+++|+||++||++|+.+.|.|.+++++++++ +.++.|++|.++ .+++.|+|
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~---v~~~~vd~d~~~-----------------------~l~~~~~v 82 (222)
T 3dxb_A 29 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK---LTVAKLNIDQNP-----------------------GTAPKYGI 82 (222)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTCT-----------------------TTGGGGTC
T ss_pred cCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC---cEEEEEECCCCH-----------------------HHHHHcCC
Confidence 4799999999999999999999999999999764 899999998764 37889999
Q ss_pred CCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhhcCCC
Q 008336 436 SGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWP 489 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~~~~~ 489 (569)
.++||++++ ++|+++.+..+. .+ .+.|.+.|++++....
T Consensus 83 ~~~Pt~~~~-~~G~~~~~~~G~-----------~~---~~~l~~~l~~~l~~~~ 121 (222)
T 3dxb_A 83 RGIPTLLLF-KNGEVAATKVGA-----------LS---KGQLKEFLDANLAGSA 121 (222)
T ss_dssp CSBSEEEEE-ETTEEEEEEESC-----------CC---HHHHHHHHHHHSCCSC
T ss_pred CcCCEEEEE-ECCeEEEEeccc-----------cC---hHHHHHHHHhhccccc
Confidence 999999999 589988764221 12 3456666666665443
No 330
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.31 E-value=4e-12 Score=114.15 Aligned_cols=120 Identities=11% Similarity=0.203 Sum_probs=96.2
Q ss_pred ccccccccCccCCceecCCC--ceeecCC-CCCc-EEEEEe-cCCCHhhHhhHHHHHHHHHHhcCCCCEE-EEEEeCCCC
Q 008336 9 HDIQSLLSSSARDFLIRSNG--DQVKLDS-LKGK-IGLYFS-ASWCGPCQRFTPILAEVYNELSRQGDFE-VIFVSGDED 82 (569)
Q Consensus 9 ~~~~~~~g~~~pdf~~~~~g--~~v~l~~-~~gk-vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~g~~~-vv~v~~d~~ 82 (569)
|...-.+|+.+|+|.+..+| +.++|++ ++|| ++|+|| +.|||.|..+++.|++.+.+|++.| +. |++||+| +
T Consensus 10 ~~~~~~vGd~aPdf~l~~~g~~~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~g-v~~VigIS~D-~ 87 (171)
T 2xhf_A 10 HGSPIKVGDIIPDVLVYEDVPSKSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEG-YHTIACIAVN-D 87 (171)
T ss_dssp -CCCCCTTCBCCCCEEECSSTTCEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTT-CCEEEEEESS-C
T ss_pred CCCcccCcCCCCCeEEecCCCCcEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCC-CCEEEEEeCC-C
Confidence 34555789999999554555 8999999 4999 888887 7899999999999999999999886 85 9999999 6
Q ss_pred HHHHHHHHHhCCC--cccccCCchhHHHHHHhcCCC-----------CccEEEEECCCCcEEEc
Q 008336 83 DEAFKGYFSKMPW--LAVPFSDSETRDKLDELFKVM-----------GIPHLVILDENGKVLSD 133 (569)
Q Consensus 83 ~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~v~-----------~~P~~~lid~~G~i~~~ 133 (569)
....++|.++.+. .+..++|.+ ..+++.||+. ....++||| +|+|+..
T Consensus 88 ~~~~~~w~~~~~~~~~f~lLSD~~--~~~a~ayGv~~~~~~~g~g~~~~R~tfvId-dG~V~~~ 148 (171)
T 2xhf_A 88 PFVMAAWGKTVDPEHKIRMLADMH--GEFTRALGTELDSSKMLGNNRSRRYAMLID-DNKIRSV 148 (171)
T ss_dssp HHHHHHHHHHHCTTCCSEEEECTT--SHHHHHHTCBCCCHHHHSSCCBCCEEEEEE-TTEEEEE
T ss_pred HHHHHHHHHhcCCCCCeEEEEeCC--chHHHHhCCceeccccCCCcceEEEEEEEe-CCEEEEE
Confidence 7788888888776 455556644 4789999873 346789998 9999874
No 331
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.31 E-value=6.2e-12 Score=105.08 Aligned_cols=72 Identities=18% Similarity=0.401 Sum_probs=59.9
Q ss_pred CCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHh
Q 008336 34 DSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDEL 112 (569)
Q Consensus 34 ~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 112 (569)
.+.+|+ ++|+||++||++|+.+.|.|.+++++++ ++.++.|+++... ..+++.
T Consensus 20 ~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~---~v~~~~vd~~~~~-----------------------~~~~~~ 73 (111)
T 2pu9_C 20 KAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL---DVIFLKLDCNQEN-----------------------KTLAKE 73 (111)
T ss_dssp TTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSTT-----------------------HHHHHH
T ss_pred HhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC---CeEEEEEecCcch-----------------------HHHHHH
Confidence 344688 9999999999999999999999999885 3889999988321 258899
Q ss_pred cCCCCccEEEEECCCCcEEE
Q 008336 113 FKVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 113 ~~v~~~P~~~lid~~G~i~~ 132 (569)
|++.++|++++ +++|+++.
T Consensus 74 ~~v~~~Pt~~~-~~~G~~~~ 92 (111)
T 2pu9_C 74 LGIRVVPTFKI-LKENSVVG 92 (111)
T ss_dssp HCCSBSSEEEE-ESSSSEEE
T ss_pred cCCCeeeEEEE-EeCCcEEE
Confidence 99999999554 58998875
No 332
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.31 E-value=4.1e-12 Score=107.92 Aligned_cols=81 Identities=15% Similarity=0.289 Sum_probs=61.6
Q ss_pred cCCCCceecc-cCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhc--CCCeEEEEEeCCCChhHHHHHHhcCCCcccc
Q 008336 344 GKNGGKVPVS-DLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKER--NESLEVVFISSDRDQTSFDEFFKGMPWLALP 420 (569)
Q Consensus 344 ~~~g~~v~l~-~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~--~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~ 420 (569)
..+++.+... ..++++++|+||++||++|+++.|.|.++++++++. ..++.++.|+++...
T Consensus 11 ~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~---------------- 74 (121)
T 2djj_A 11 VVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND---------------- 74 (121)
T ss_dssp ECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC----------------
T ss_pred EecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc----------------
Confidence 3444444433 135899999999999999999999999999999751 124788888877542
Q ss_pred cCchhhHHHHHhcCCCCccEEEEECCCCcE
Q 008336 421 FGDARKASLSRKFKVSGIPMLVAIGPSGRT 450 (569)
Q Consensus 421 ~~~d~~~~l~~~~~v~~~Pt~~lid~~G~i 450 (569)
+++ +|+++||+++++++|++
T Consensus 75 --------~~~--~v~~~Pt~~~~~~~~~~ 94 (121)
T 2djj_A 75 --------VPD--EIQGFPTIKLYPAGAKG 94 (121)
T ss_dssp --------CSS--CCSSSSEEEEECSSCTT
T ss_pred --------ccc--ccCcCCeEEEEeCcCCC
Confidence 233 99999999999887774
No 333
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.30 E-value=6.1e-12 Score=103.93 Aligned_cols=69 Identities=25% Similarity=0.547 Sum_probs=61.6
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
+++ ++|+||++||++|+.+.|.+.++++++++ ++.++.|+++.+. .+++.|++
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~------------------------~~~~~~~v 71 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEG--KADILKLDVDENP------------------------STAAKYEV 71 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCH------------------------HHHHHTTC
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CcEEEEEECCcCH------------------------HHHHhCCC
Confidence 788 99999999999999999999999999874 3899999998774 48899999
Q ss_pred CCccEEEEECCCCcEEE
Q 008336 116 MGIPHLVILDENGKVLS 132 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~ 132 (569)
.++|++++++ +|+++.
T Consensus 72 ~~~Pt~~~~~-~G~~~~ 87 (106)
T 3die_A 72 MSIPTLIVFK-DGQPVD 87 (106)
T ss_dssp CSBSEEEEEE-TTEEEE
T ss_pred cccCEEEEEe-CCeEEE
Confidence 9999999994 888775
No 334
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.30 E-value=2.5e-11 Score=100.52 Aligned_cols=69 Identities=23% Similarity=0.597 Sum_probs=60.8
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
.++ ++|+||++||++|+.+.|.+.+++++++. ++.++.|+++.+. .+++.|++
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~------------------------~~~~~~~v 71 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD--KLKCVKLNTDESP------------------------NVASEYGI 71 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCH------------------------HHHHHHTC
T ss_pred CCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC--ceEEEEEECCCCH------------------------HHHHHCCC
Confidence 477 99999999999999999999999999864 4899999998764 48899999
Q ss_pred CCccEEEEECCCCcEEE
Q 008336 116 MGIPHLVILDENGKVLS 132 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~ 132 (569)
.++|+++++ ++|+++.
T Consensus 72 ~~~Pt~~~~-~~G~~~~ 87 (107)
T 1dby_A 72 RSIPTIMVF-KGGKKCE 87 (107)
T ss_dssp CSSCEEEEE-SSSSEEE
T ss_pred CcCCEEEEE-eCCEEEE
Confidence 999999888 7898865
No 335
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=3.8e-12 Score=110.89 Aligned_cols=75 Identities=24% Similarity=0.406 Sum_probs=63.4
Q ss_pred cCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhc
Q 008336 354 DLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKF 433 (569)
Q Consensus 354 ~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~ 433 (569)
.-++++++|+||++||++|+.+.|.|+++++++++. ++.++.|+++..+ ++++.|
T Consensus 23 ~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~--~v~~~~vd~~~~~-----------------------~~~~~~ 77 (137)
T 2dj0_A 23 RDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCT--GLNFGKVDVGRYT-----------------------DVSTRY 77 (137)
T ss_dssp HSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSS--SCEEEECCTTTCH-----------------------HHHHHT
T ss_pred cCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC--CeEEEEEeCccCH-----------------------HHHHHc
Confidence 334679999999999999999999999999999742 4888888777654 478889
Q ss_pred CCC------CccEEEEECCCCcEEEcc
Q 008336 434 KVS------GIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 434 ~v~------~~Pt~~lid~~G~i~~~~ 454 (569)
+|. ++||++++ ++|+++.+.
T Consensus 78 ~v~~~~~~~~~Pt~~~~-~~G~~~~~~ 103 (137)
T 2dj0_A 78 KVSTSPLTKQLPTLILF-QGGKEAMRR 103 (137)
T ss_dssp TCCCCSSSSCSSEEEEE-SSSSEEEEE
T ss_pred cCcccCCcCCCCEEEEE-ECCEEEEEe
Confidence 998 99999999 789998764
No 336
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.30 E-value=6.3e-12 Score=105.18 Aligned_cols=71 Identities=30% Similarity=0.698 Sum_probs=59.9
Q ss_pred CCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcC
Q 008336 36 LKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFK 114 (569)
Q Consensus 36 ~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 114 (569)
.+++ ++|+||++||++|+.+.|.+.++++++... ++.++.|+++... .+++.|+
T Consensus 19 ~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~------------------------~~~~~~~ 73 (112)
T 3d6i_A 19 AGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNS-NVSFLSIDADENS------------------------EISELFE 73 (112)
T ss_dssp TTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGT-TSEEEEEETTTCH------------------------HHHHHTT
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCC-CEEEEEEecccCH------------------------HHHHHcC
Confidence 3478 999999999999999999999999987544 4999999998764 4889999
Q ss_pred CCCccEEEEECCCCcEEE
Q 008336 115 VMGIPHLVILDENGKVLS 132 (569)
Q Consensus 115 v~~~P~~~lid~~G~i~~ 132 (569)
+.++|+++++ ++|+++.
T Consensus 74 v~~~Pt~~~~-~~G~~~~ 90 (112)
T 3d6i_A 74 ISAVPYFIII-HKGTILK 90 (112)
T ss_dssp CCSSSEEEEE-ETTEEEE
T ss_pred CCcccEEEEE-ECCEEEE
Confidence 9999999998 6898875
No 337
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.30 E-value=1.5e-11 Score=105.92 Aligned_cols=67 Identities=30% Similarity=0.511 Sum_probs=59.8
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
.++ ++|+||++||++|+.+.|.|.++++++++ .+.++.|+++.+. .+++.|+|
T Consensus 34 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~------------------------~l~~~~~v 87 (130)
T 2dml_A 34 SDGLWLVEFYAPWCGHCQRLTPEWKKAATALKD--VVKVGAVNADKHQ------------------------SLGGQYGV 87 (130)
T ss_dssp CSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTT--TSEEEEEETTTCH------------------------HHHHHHTC
T ss_pred CCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcC--ceEEEEEeCCCCH------------------------HHHHHcCC
Confidence 477 99999999999999999999999999864 4889999998763 48899999
Q ss_pred CCccEEEEECCCCc
Q 008336 116 MGIPHLVILDENGK 129 (569)
Q Consensus 116 ~~~P~~~lid~~G~ 129 (569)
.++|++++++++|+
T Consensus 88 ~~~Pt~~~~~~~~~ 101 (130)
T 2dml_A 88 QGFPTIKIFGANKN 101 (130)
T ss_dssp CSSSEEEEESSCTT
T ss_pred CccCEEEEEeCCCC
Confidence 99999999988886
No 338
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.30 E-value=6.9e-12 Score=106.09 Aligned_cols=75 Identities=20% Similarity=0.401 Sum_probs=60.4
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008336 357 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 436 (569)
Q Consensus 357 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 436 (569)
|++++|+||++||++|+++.|.|.+++++++ ..++.++++...+ .+....+++.|+|.
T Consensus 29 ~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~-----~~v~~~~~~~~~~-----------------~~~~~~~~~~~~i~ 86 (118)
T 1zma_A 29 KETATFFIGRKTCPYCRKFAGTLSGVVAETK-----AHIYFINSEEPSQ-----------------LNDLQAFRSRYGIP 86 (118)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHHC-----CCCEEEETTCGGG-----------------HHHHHHHHHHHTCC
T ss_pred CCeEEEEEECCCCccHHHHHHHHHHHHHhcC-----CeEEEEECCCcCc-----------------HHHHHHHHHHcCCC
Confidence 7899999999999999999999999988874 3567777765421 01234688999999
Q ss_pred CccEEEEECCCCcEEEcc
Q 008336 437 GIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 437 ~~Pt~~lid~~G~i~~~~ 454 (569)
++||++++ ++|+++.+.
T Consensus 87 ~~Pt~~~~-~~G~~~~~~ 103 (118)
T 1zma_A 87 TVPGFVHI-TDGQINVRC 103 (118)
T ss_dssp SSCEEEEE-ETTEEEEEC
T ss_pred CCCeEEEE-ECCEEEEEe
Confidence 99999999 589988763
No 339
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.30 E-value=8.5e-12 Score=103.48 Aligned_cols=68 Identities=16% Similarity=0.311 Sum_probs=60.3
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
+++ ++|+||++||++|+.+.|.+.++++++. ++.++.|+++.+. .+++.|++
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~---~~~~~~vd~~~~~------------------------~~~~~~~v 72 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP---QAVFLEVDVHQCQ------------------------GTAATNNI 72 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSH------------------------HHHHHTTC
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHHHHHCC---CcEEEEEECccCH------------------------HHHHhcCC
Confidence 578 9999999999999999999999999983 4899999998763 48899999
Q ss_pred CCccEEEEECCCCcEEE
Q 008336 116 MGIPHLVILDENGKVLS 132 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~ 132 (569)
.++|+++++ ++|+++.
T Consensus 73 ~~~Pt~~~~-~~G~~~~ 88 (107)
T 1gh2_A 73 SATPTFQFF-RNKVRID 88 (107)
T ss_dssp CSSSEEEEE-ETTEEEE
T ss_pred CcccEEEEE-ECCeEEE
Confidence 999999999 7888765
No 340
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.29 E-value=2.1e-11 Score=103.35 Aligned_cols=69 Identities=25% Similarity=0.545 Sum_probs=61.4
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
.++ ++|+||++||++|+.+.|.|.++++++.. ++.++.|+++.+. .+++.|+|
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~--~v~~~~vd~d~~~------------------------~l~~~~~v 83 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG--KVVMAKVDIDDHT------------------------DLAIEYEV 83 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--SSEEEEEETTTTH------------------------HHHHHTTC
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEeCCCCH------------------------HHHHHcCC
Confidence 578 99999999999999999999999999864 4899999998663 48899999
Q ss_pred CCccEEEEECCCCcEEE
Q 008336 116 MGIPHLVILDENGKVLS 132 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~ 132 (569)
.++|+++++ ++|+++.
T Consensus 84 ~~~Pt~~~~-~~G~~~~ 99 (119)
T 1w4v_A 84 SAVPTVLAM-KNGDVVD 99 (119)
T ss_dssp CSSSEEEEE-ETTEEEE
T ss_pred CcccEEEEE-eCCcEEE
Confidence 999999999 8998875
No 341
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.29 E-value=2.3e-11 Score=101.40 Aligned_cols=69 Identities=28% Similarity=0.568 Sum_probs=61.2
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
.++ ++|+||++||++|+.+.|.+.++++++.+ ++.++.|+++..+ .+++.|+|
T Consensus 21 ~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~--~v~~~~vd~~~~~------------------------~l~~~~~v 74 (111)
T 3gnj_A 21 EGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE--SFGFYYVDVEEEK------------------------TLFQRFSL 74 (111)
T ss_dssp SCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTCH------------------------HHHHHTTC
T ss_pred cCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC--ceEEEEEECCcCh------------------------hHHHhcCC
Confidence 467 99999999999999999999999999864 4899999998764 48899999
Q ss_pred CCccEEEEECCCCcEEE
Q 008336 116 MGIPHLVILDENGKVLS 132 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~ 132 (569)
.++|+++++ ++|+++.
T Consensus 75 ~~~Pt~~~~-~~g~~~~ 90 (111)
T 3gnj_A 75 KGVPQILYF-KDGEYKG 90 (111)
T ss_dssp CSSCEEEEE-ETTEEEE
T ss_pred CcCCEEEEE-ECCEEEE
Confidence 999999999 6888764
No 342
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.29 E-value=4.6e-12 Score=113.97 Aligned_cols=80 Identities=10% Similarity=0.177 Sum_probs=58.6
Q ss_pred CCCEEEEEEecCCChhHHhhhHH---HHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHh
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPK---LIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRK 432 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~---l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~ 432 (569)
.||+|||+|||+||++|+.+.+. ..++++.+.+. +.++.|+.|..++....|.. .+...
T Consensus 38 ~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~---fv~ikVD~de~~~l~~~y~~---------------~~q~~ 99 (173)
T 3ira_A 38 ENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEA---FVSIKVDREERPDIDNIYMT---------------VCQII 99 (173)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHH---CEEEEEETTTCHHHHHHHHH---------------HHHHH
T ss_pred hCCCEEEecccchhHhhccccccccCCHHHHHHHHhc---CceeeeCCcccCcHHHHHHH---------------HHHHH
Confidence 48999999999999999999983 24566666554 77777777765542222221 11223
Q ss_pred cCCCCccEEEEECCCCcEEEc
Q 008336 433 FKVSGIPMLVAIGPSGRTITK 453 (569)
Q Consensus 433 ~~v~~~Pt~~lid~~G~i~~~ 453 (569)
+++.++|++++++++|+++..
T Consensus 100 ~gv~g~Pt~v~l~~dG~~v~~ 120 (173)
T 3ira_A 100 LGRGGWPLNIIMTPGKKPFFA 120 (173)
T ss_dssp HSCCCSSEEEEECTTSCEEEE
T ss_pred cCCCCCcceeeECCCCCceee
Confidence 599999999999999999986
No 343
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.29 E-value=6.6e-12 Score=104.86 Aligned_cols=71 Identities=17% Similarity=0.345 Sum_probs=61.7
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
.+++++|+||++||++|+.+.|.|.++++.++ ++.++.|+++... ++++.|+|
T Consensus 18 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~----~v~~~~vd~~~~~-----------------------~l~~~~~v 70 (110)
T 2l6c_A 18 GLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP----QVAISSVDSEARP-----------------------ELMKELGF 70 (110)
T ss_dssp TCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT----TSCEEEEEGGGCH-----------------------HHHHHTTC
T ss_pred cCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC----CcEEEEEcCcCCH-----------------------HHHHHcCC
Confidence 46899999999999999999999998887764 4788888877554 58899999
Q ss_pred CCccEEEEECCCCcEEEcc
Q 008336 436 SGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~ 454 (569)
+++||++++ ++|+++.+.
T Consensus 71 ~~~Pt~~~~-~~G~~v~~~ 88 (110)
T 2l6c_A 71 ERVPTLVFI-RDGKVAKVF 88 (110)
T ss_dssp CSSCEEEEE-ESSSEEEEE
T ss_pred cccCEEEEE-ECCEEEEEE
Confidence 999999999 899998874
No 344
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.29 E-value=2.9e-12 Score=110.41 Aligned_cols=80 Identities=21% Similarity=0.518 Sum_probs=64.0
Q ss_pred ceeecCCCCCc-EEEEEecCCCHhhHhhHHHH---HHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCch
Q 008336 29 DQVKLDSLKGK-IGLYFSASWCGPCQRFTPIL---AEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSE 104 (569)
Q Consensus 29 ~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l---~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~ 104 (569)
+.+.++..+|| ++|+||++||++|+.+.|.+ .++.+.+.. .+.++.|+++.+..
T Consensus 18 ~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~-------------------- 75 (130)
T 2kuc_A 18 EALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR--HFVNLKMDMEKGEG-------------------- 75 (130)
T ss_dssp HHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH--HSEEEEECSSSTTH--------------------
T ss_pred HHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc--CeEEEEEecCCcch--------------------
Confidence 34555666789 99999999999999999999 666665543 37778887774211
Q ss_pred hHHHHHHhcCCCCccEEEEECCCCcEEE
Q 008336 105 TRDKLDELFKVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 105 ~~~~l~~~~~v~~~P~~~lid~~G~i~~ 132 (569)
..+++.|+|.++|+++++|++|+++.
T Consensus 76 --~~~~~~~~v~~~Pt~~~~d~~G~~~~ 101 (130)
T 2kuc_A 76 --VELRKKYGVHAYPTLLFINSSGEVVY 101 (130)
T ss_dssp --HHHHHHTTCCSSCEEEEECTTSCEEE
T ss_pred --HHHHHHcCCCCCCEEEEECCCCcEEE
Confidence 36889999999999999999999876
No 345
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.29 E-value=7.6e-12 Score=123.53 Aligned_cols=72 Identities=17% Similarity=0.344 Sum_probs=65.1
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
++|+|+|+||++||++|+.+.|.|.+++++++++ +.++.|++|.++ .+++.|+|
T Consensus 25 ~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~---~~~~~vd~~~~~-----------------------~~~~~~~v 78 (287)
T 3qou_A 25 MTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQ---FILAKLDCDAEQ-----------------------MIAAQFGL 78 (287)
T ss_dssp TTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSS---SEEEEEETTTCH-----------------------HHHHTTTC
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCC---eEEEEEeCccCH-----------------------HHHHHcCC
Confidence 4899999999999999999999999999999764 899999998765 58999999
Q ss_pred CCccEEEEECCCCcEEEcc
Q 008336 436 SGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~ 454 (569)
+++||++++ ++|+++.+.
T Consensus 79 ~~~Pt~~~~-~~G~~~~~~ 96 (287)
T 3qou_A 79 RAIPTVYLF-QNGQPVDGF 96 (287)
T ss_dssp CSSSEEEEE-ETTEEEEEE
T ss_pred CCCCeEEEE-ECCEEEEEe
Confidence 999999999 799988764
No 346
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.28 E-value=4.7e-12 Score=110.26 Aligned_cols=88 Identities=22% Similarity=0.357 Sum_probs=68.6
Q ss_pred CCceecCCCceee--cCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCc
Q 008336 20 RDFLIRSNGDQVK--LDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWL 96 (569)
Q Consensus 20 pdf~~~~~g~~v~--l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~ 96 (569)
|+.+..++.+.+. +..-+++ ++|+|||+||++|+.+.|.|.++++++... ++.++.|+++...
T Consensus 6 ~~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~-~v~~~~vd~~~~~------------- 71 (137)
T 2dj0_A 6 SGYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCT-GLNFGKVDVGRYT------------- 71 (137)
T ss_dssp CSCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSS-SCEEEECCTTTCH-------------
T ss_pred CceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC-CeEEEEEeCccCH-------------
Confidence 3444444444332 3445677 999999999999999999999999999754 4888888888664
Q ss_pred ccccCCchhHHHHHHhcCCC------CccEEEEECCCCcEEEc
Q 008336 97 AVPFSDSETRDKLDELFKVM------GIPHLVILDENGKVLSD 133 (569)
Q Consensus 97 ~~~~~~~~~~~~l~~~~~v~------~~P~~~lid~~G~i~~~ 133 (569)
.+++.|+|. ++|+++++ ++|+++.+
T Consensus 72 -----------~~~~~~~v~~~~~~~~~Pt~~~~-~~G~~~~~ 102 (137)
T 2dj0_A 72 -----------DVSTRYKVSTSPLTKQLPTLILF-QGGKEAMR 102 (137)
T ss_dssp -----------HHHHHTTCCCCSSSSCSSEEEEE-SSSSEEEE
T ss_pred -----------HHHHHccCcccCCcCCCCEEEEE-ECCEEEEE
Confidence 478889998 99999999 78888754
No 347
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.28 E-value=8.9e-12 Score=105.78 Aligned_cols=80 Identities=18% Similarity=0.358 Sum_probs=62.8
Q ss_pred eecCCCceeecC-CCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCC---CCEEEEEEeCCCCHHHHHHHHHhCCCcc
Q 008336 23 LIRSNGDQVKLD-SLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQ---GDFEVIFVSGDEDDEAFKGYFSKMPWLA 97 (569)
Q Consensus 23 ~~~~~g~~v~l~-~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~---g~~~vv~v~~d~~~~~~~~~~~~~~~~~ 97 (569)
+..++++.+... ..+++ ++|+|||+||++|+.+.|.|.+++++++.. .++.++.|+++...
T Consensus 9 v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-------------- 74 (121)
T 2djj_A 9 VTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-------------- 74 (121)
T ss_dssp SEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC--------------
T ss_pred eEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc--------------
Confidence 344566666544 24678 999999999999999999999999999762 24889999887541
Q ss_pred cccCCchhHHHHHHhcCCCCccEEEEECCCCc
Q 008336 98 VPFSDSETRDKLDELFKVMGIPHLVILDENGK 129 (569)
Q Consensus 98 ~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~ 129 (569)
+++ +|.++|++++++++|+
T Consensus 75 -----------~~~--~v~~~Pt~~~~~~~~~ 93 (121)
T 2djj_A 75 -----------VPD--EIQGFPTIKLYPAGAK 93 (121)
T ss_dssp -----------CSS--CCSSSSEEEEECSSCT
T ss_pred -----------ccc--ccCcCCeEEEEeCcCC
Confidence 223 8999999999987776
No 348
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.28 E-value=6.6e-12 Score=105.85 Aligned_cols=88 Identities=11% Similarity=0.068 Sum_probs=66.6
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008336 357 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 436 (569)
Q Consensus 357 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 436 (569)
+++|+|+|||+||++|+.+.|.|+++++++. ++.++.|++|.. +..|+|+
T Consensus 23 ~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~----~v~f~kvd~d~~--------------------------~~~~~v~ 72 (118)
T 3evi_A 23 DVWVIIHLYRSSIPMCLLVNQHLSLLARKFP----ETKFVKAIVNSC--------------------------IQHYHDN 72 (118)
T ss_dssp TCEEEEEEECTTSHHHHHHHHHHHHHHHHCT----TSEEEEEEGGGT--------------------------STTCCGG
T ss_pred CCeEEEEEeCCCChHHHHHHHHHHHHHHHCC----CCEEEEEEhHHh--------------------------HHHCCCC
Confidence 4599999999999999999999999999885 378888876632 4679999
Q ss_pred CccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHH
Q 008336 437 GIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDG 479 (569)
Q Consensus 437 ~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~ 479 (569)
++||++++ ++|+.+.+..+.. ..|.. .++...++.+..
T Consensus 73 ~~PT~~~f-k~G~~v~~~~G~~--~~gg~--~~~~~~le~~L~ 110 (118)
T 3evi_A 73 CLPTIFVY-KNGQIEAKFIGII--ECGGI--NLKLEELEWKLA 110 (118)
T ss_dssp GCSEEEEE-ETTEEEEEEESTT--TTTCS--SCCHHHHHHHHH
T ss_pred CCCEEEEE-ECCEEEEEEeChh--hhCCC--CCCHHHHHHHHH
Confidence 99999999 8999998854321 11211 355555555443
No 349
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.28 E-value=1.3e-11 Score=107.91 Aligned_cols=81 Identities=15% Similarity=0.162 Sum_probs=65.7
Q ss_pred cCCCceee-cCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCC
Q 008336 25 RSNGDQVK-LDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSD 102 (569)
Q Consensus 25 ~~~g~~v~-l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~ 102 (569)
.++++.+. ...-.++ ++|+||++||++|+.+.|.|.++++++.. ++.++.|+++...
T Consensus 10 ~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~------------------- 68 (140)
T 3hz4_A 10 EFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS--SAVFGRINIATNP------------------- 68 (140)
T ss_dssp EECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TSEEEEEETTTCH-------------------
T ss_pred EcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCC--ceEEEEEECCcCH-------------------
Confidence 34444444 2222477 99999999999999999999999999975 4899999998764
Q ss_pred chhHHHHHHhcCCCCccEEEEECCCCcEEE
Q 008336 103 SETRDKLDELFKVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 103 ~~~~~~l~~~~~v~~~P~~~lid~~G~i~~ 132 (569)
.+++.|+|.++|+++++ ++|+++.
T Consensus 69 -----~l~~~~~v~~~Pt~~~~-~~G~~~~ 92 (140)
T 3hz4_A 69 -----WTAEKYGVQGTPTFKFF-CHGRPVW 92 (140)
T ss_dssp -----HHHHHHTCCEESEEEEE-ETTEEEE
T ss_pred -----hHHHHCCCCcCCEEEEE-eCCcEEE
Confidence 48899999999999998 7888764
No 350
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.28 E-value=2.5e-12 Score=109.78 Aligned_cols=72 Identities=28% Similarity=0.582 Sum_probs=58.8
Q ss_pred CCCEEEEEEecCCCh--------------hHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCccccc
Q 008336 356 AGKTILLYFSAHWCP--------------PCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPF 421 (569)
Q Consensus 356 ~gk~vll~F~a~wC~--------------~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~ 421 (569)
.+|+++|+||++||+ +|+.+.|.+.+++++++++ +.++.|++|.+.
T Consensus 20 ~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~---~~~~~vd~d~~~----------------- 79 (123)
T 1oaz_A 20 ADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGK---LTVAKLNIDQNP----------------- 79 (123)
T ss_dssp CSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC----------CEEEEEETTSCT-----------------
T ss_pred CCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCC---eEEEEEECCCCH-----------------
Confidence 489999999999999 9999999999999988754 889999988764
Q ss_pred CchhhHHHHHhcCCCCccEEEEECCCCcEEEcc
Q 008336 422 GDARKASLSRKFKVSGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 422 ~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~ 454 (569)
++++.|+|+++||++++ ++|+++.+.
T Consensus 80 ------~l~~~~~v~~~Pt~~~~-~~G~~~~~~ 105 (123)
T 1oaz_A 80 ------GTAPKYGIRGIPTLLLF-KNGEVAATK 105 (123)
T ss_dssp ------TTGGGGTCCBSSEEEEE-ESSSEEEEE
T ss_pred ------HHHHHcCCCccCEEEEE-ECCEEEEEE
Confidence 47899999999999999 999998763
No 351
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.28 E-value=5.2e-12 Score=110.71 Aligned_cols=70 Identities=10% Similarity=0.258 Sum_probs=60.9
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
.++ ++|+|||+||++|+.+.|.|.++++++.+ ++.++.|++|.+. .+++.|+|
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~d~~~------------------------~~~~~~~i 75 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN--FAVIYLVDITEVP------------------------DFNKMYEL 75 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT--TEEEEEEETTTCC------------------------TTTTSSCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC--CeEEEEEccccCH------------------------HHHHHcCC
Confidence 478 99999999999999999999999999864 4999999998653 37789999
Q ss_pred CCccEEEEECCCCcEEEc
Q 008336 116 MGIPHLVILDENGKVLSD 133 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~~ 133 (569)
.++|+++++ ++|+++..
T Consensus 76 ~~~Pt~~~~-~~G~~v~~ 92 (142)
T 1qgv_A 76 YDPCTVMFF-FRNKHIMI 92 (142)
T ss_dssp CSSCEEEEE-ETTEEEEE
T ss_pred CCCCEEEEE-ECCcEEEE
Confidence 999999999 57887753
No 352
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.27 E-value=1.1e-11 Score=112.73 Aligned_cols=114 Identities=14% Similarity=0.276 Sum_probs=91.5
Q ss_pred ccCccCCcee-c--C---------CC----ceeecCC-CCCc-EEEEEe-cCCCHhhH-hhHHHHHHHHHHh-cCCCCE-
Q 008336 15 LSSSARDFLI-R--S---------NG----DQVKLDS-LKGK-IGLYFS-ASWCGPCQ-RFTPILAEVYNEL-SRQGDF- 72 (569)
Q Consensus 15 ~g~~~pdf~~-~--~---------~g----~~v~l~~-~~gk-vlv~F~-a~wC~~C~-~~~p~l~~~~~~~-~~~g~~- 72 (569)
+|+.+|+|.+ + . +| +.+++++ ++|| ++|+|| +.|||.|. .+++.|++.+.+| +..| +
T Consensus 3 vGd~aPdf~l~~~~~~~~~~~~~~~G~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g-~~ 81 (182)
T 1xiy_A 3 ENDLIPNVKVMIDVRNMNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENN-FD 81 (182)
T ss_dssp TTCBCCCCEEEEEHHHHTC--------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSC-CS
T ss_pred CCCCCCCeEEEcccccccccccccCCCccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCC-Cc
Confidence 6999999954 3 2 67 7999998 6999 777775 89999999 9999999999999 8876 7
Q ss_pred EEEEEeCCCCHHHHHHHHHhCCC-cccccCCchhHHHHHHhcCCC-----------CccEEEEECCCCcEEEc
Q 008336 73 EVIFVSGDEDDEAFKGYFSKMPW-LAVPFSDSETRDKLDELFKVM-----------GIPHLVILDENGKVLSD 133 (569)
Q Consensus 73 ~vv~v~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~v~-----------~~P~~~lid~~G~i~~~ 133 (569)
.|++||+| +....++|.++.+. .+..++|.+ ..+++.||+. ..+.++||| +|+|++.
T Consensus 82 ~V~gvS~D-~~~~~~~~~~~~~~~~f~lLsD~~--~~~a~~yGv~~~~~~~G~g~~~~R~tfvId-dG~V~~~ 150 (182)
T 1xiy_A 82 DIYCITNN-DIYVLKSWFKSMDIKKIKYISDGN--SSFTDSMNMLVDKSNFFMGMRPWRFVAIVE-NNILVKM 150 (182)
T ss_dssp EEEEEESS-CHHHHHHHHHHTTCCSSEEEECTT--SHHHHHTTCEEECGGGTCCEEECCEEEEEE-TTEEEEE
T ss_pred EEEEEeCC-CHHHHHHHHHHcCCCCceEEEeCc--hHHHHHhCCceeccccCCCCceEEEEEEEc-CCEEEEE
Confidence 49999999 67788899988887 355556644 4789999973 256789998 9999875
No 353
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.27 E-value=1.5e-11 Score=102.81 Aligned_cols=69 Identities=30% Similarity=0.632 Sum_probs=60.9
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
.++ ++|+||++||++|+.+.|.+.++++++++ ++.++.|+++.+. .+++.|++
T Consensus 22 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~------------------------~~~~~~~v 75 (112)
T 1t00_A 22 NDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD--KIEIVKLNIDENP------------------------GTAAKYGV 75 (112)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCH------------------------HHHHHTTC
T ss_pred CCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC--CeEEEEEEcCCCH------------------------HHHHhCCC
Confidence 478 99999999999999999999999999864 4899999998764 48899999
Q ss_pred CCccEEEEECCCCcEEE
Q 008336 116 MGIPHLVILDENGKVLS 132 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~ 132 (569)
.++|+++++ ++|+++.
T Consensus 76 ~~~Pt~~~~-~~G~~~~ 91 (112)
T 1t00_A 76 MSIPTLNVY-QGGEVAK 91 (112)
T ss_dssp CSSSEEEEE-ETTEEEE
T ss_pred CcccEEEEE-eCCEEEE
Confidence 999998888 7898865
No 354
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.27 E-value=2.4e-11 Score=108.17 Aligned_cols=69 Identities=20% Similarity=0.552 Sum_probs=61.6
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
.++ ++|+||++||++|+.+.|.|.++++++.. ++.++.|+++.+. .+++.|+|
T Consensus 63 ~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~--~v~~~~vd~~~~~------------------------~l~~~~~i 116 (155)
T 2ppt_A 63 DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAG--QVRLAKIDTQAHP------------------------AVAGRHRI 116 (155)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TCEEEEEETTTST------------------------HHHHHTTC
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHccC--CEEEEEEeCCccH------------------------HHHHHcCC
Confidence 577 99999999999999999999999999974 4899999998663 48899999
Q ss_pred CCccEEEEECCCCcEEE
Q 008336 116 MGIPHLVILDENGKVLS 132 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~ 132 (569)
.++|+++++ ++|+++.
T Consensus 117 ~~~Pt~~~~-~~G~~~~ 132 (155)
T 2ppt_A 117 QGIPAFILF-HKGRELA 132 (155)
T ss_dssp CSSSEEEEE-ETTEEEE
T ss_pred CcCCEEEEE-eCCeEEE
Confidence 999999999 7898875
No 355
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.27 E-value=3.4e-11 Score=99.58 Aligned_cols=81 Identities=27% Similarity=0.539 Sum_probs=66.1
Q ss_pred cCCCceeecC-CCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCC
Q 008336 25 RSNGDQVKLD-SLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSD 102 (569)
Q Consensus 25 ~~~g~~v~l~-~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~ 102 (569)
.++++.+... .-.++ ++|+||++||++|+.+.|.+.+++++++. ++.++.|+++.+.
T Consensus 6 ~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~------------------- 64 (107)
T 2i4a_A 6 AVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG--KVTVAKVNIDDNP------------------- 64 (107)
T ss_dssp ECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT--SEEEEEEETTTCC-------------------
T ss_pred ecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC--cEEEEEEECCCCH-------------------
Confidence 3444444322 23577 99999999999999999999999999874 4999999998653
Q ss_pred chhHHHHHHhcCCCCccEEEEECCCCcEEE
Q 008336 103 SETRDKLDELFKVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 103 ~~~~~~l~~~~~v~~~P~~~lid~~G~i~~ 132 (569)
.+++.|++.++|+++++ ++|+++.
T Consensus 65 -----~~~~~~~v~~~Pt~~~~-~~G~~~~ 88 (107)
T 2i4a_A 65 -----ETPNAYQVRSIPTLMLV-RDGKVID 88 (107)
T ss_dssp -----HHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -----HHHHhcCCCccCEEEEE-eCCEEEE
Confidence 48899999999999999 8998875
No 356
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.27 E-value=1.5e-11 Score=105.05 Aligned_cols=70 Identities=27% Similarity=0.621 Sum_probs=61.6
Q ss_pred CCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhc
Q 008336 35 SLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELF 113 (569)
Q Consensus 35 ~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 113 (569)
..+++ ++|+||++||++|+.+.|.|.++++++. ++.++.|++|... .+++.|
T Consensus 35 ~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~---~v~~~~vd~d~~~------------------------~l~~~~ 87 (124)
T 1xfl_A 35 NESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP---NVLFLKVDTDELK------------------------SVASDW 87 (124)
T ss_dssp HHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS---SEEEEEEETTTSH------------------------HHHHHT
T ss_pred hhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CcEEEEEECccCH------------------------HHHHHc
Confidence 34688 9999999999999999999999999985 4999999998663 488999
Q ss_pred CCCCccEEEEECCCCcEEE
Q 008336 114 KVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 114 ~v~~~P~~~lid~~G~i~~ 132 (569)
+|.++|+++++ ++|+++.
T Consensus 88 ~v~~~Pt~~~~-~~G~~~~ 105 (124)
T 1xfl_A 88 AIQAMPTFMFL-KEGKILD 105 (124)
T ss_dssp TCCSSSEEEEE-ETTEEEE
T ss_pred CCCccCEEEEE-ECCEEEE
Confidence 99999998888 7898875
No 357
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.27 E-value=3.5e-11 Score=100.90 Aligned_cols=82 Identities=27% Similarity=0.551 Sum_probs=67.4
Q ss_pred ecCCCceeecCC-CCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccC
Q 008336 24 IRSNGDQVKLDS-LKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFS 101 (569)
Q Consensus 24 ~~~~g~~v~l~~-~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~ 101 (569)
..++++.+...- -.++ ++|+||++||++|+.+.|.|.++++.+++ ++.++.|+++.+.
T Consensus 10 ~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~~~~------------------ 69 (115)
T 1thx_A 10 ITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSD--RLKVVKLEIDPNP------------------ 69 (115)
T ss_dssp EECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT--TCEEEEEESTTCH------------------
T ss_pred EEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCC--cEEEEEEEcCCCH------------------
Confidence 344555554322 3577 99999999999999999999999999864 4899999998764
Q ss_pred CchhHHHHHHhcCCCCccEEEEECCCCcEEE
Q 008336 102 DSETRDKLDELFKVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 102 ~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~ 132 (569)
.+++.|++.++|+++++ ++|+++.
T Consensus 70 ------~~~~~~~v~~~Pt~~~~-~~G~~~~ 93 (115)
T 1thx_A 70 ------TTVKKYKVEGVPALRLV-KGEQILD 93 (115)
T ss_dssp ------HHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ------HHHHHcCCCceeEEEEE-cCCEEEE
Confidence 48899999999999999 8998875
No 358
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.27 E-value=1.1e-12 Score=119.18 Aligned_cols=101 Identities=15% Similarity=0.195 Sum_probs=60.9
Q ss_pred eecCCCCCc-EEEEEecCCCHhhHhhHHHH---HHHHHHhcCCCCEEEEEEeCCCCHHHHHHH-HHhCC-CcccccCCch
Q 008336 31 VKLDSLKGK-IGLYFSASWCGPCQRFTPIL---AEVYNELSRQGDFEVIFVSGDEDDEAFKGY-FSKMP-WLAVPFSDSE 104 (569)
Q Consensus 31 v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l---~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~-~~~~~-~~~~~~~~~~ 104 (569)
+.++..+|| |||+|||+||++|+.+.+.+ .++.+.+.+ ++.++.|++|...+....+ +...+ ..........
T Consensus 40 ~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (172)
T 3f9u_A 40 MEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN--DYVLITLYVDNKTPLTEPVKIMENGTERTLRTVGDK 117 (172)
T ss_dssp HHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH--HCEEEEEETTCCCEEEEEEEEEETTEEEEEEEHHHH
T ss_pred HHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC--CEEEEEEecCcccccchhhhhhhcchhhhhhhhhhh
Confidence 444556799 99999999999999974333 444444433 4899999998653200000 00000 0000000001
Q ss_pred hHHHHHHhcCCCCccEEEEECCCCcEEEc
Q 008336 105 TRDKLDELFKVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 105 ~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 133 (569)
......+.|++.++|+++++|++|+++.+
T Consensus 118 ~~~~~~~~~~v~~~Pt~~lid~~G~~~~~ 146 (172)
T 3f9u_A 118 WSYLQRVKFGANAQPFYVLIDNEGNPLNK 146 (172)
T ss_dssp HHHHHHHHHSCCCSSEEEEECTTSCBSSC
T ss_pred hhHHHHHHcCCCCcceEEEECCCCCEEee
Confidence 11122588999999999999999998764
No 359
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.26 E-value=5.4e-12 Score=109.31 Aligned_cols=73 Identities=19% Similarity=0.437 Sum_probs=59.8
Q ss_pred ecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHH
Q 008336 32 KLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLD 110 (569)
Q Consensus 32 ~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 110 (569)
.+++.+|| ++|+|||+||++|+.+.|.|.++++++ ++.++.|+++... .++
T Consensus 34 ~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~----~v~~~~vd~~~~~------------------------~l~ 85 (133)
T 3cxg_A 34 VFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY----YVTLVDIDVDIHP------------------------KLN 85 (133)
T ss_dssp HHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE----ECEEEEEETTTCH------------------------HHH
T ss_pred HHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc----CEEEEEEeccchH------------------------HHH
Confidence 45667899 999999999999999999999887765 3788888888653 488
Q ss_pred HhcCCCCccEEEEE-CCCCc--EEE
Q 008336 111 ELFKVMGIPHLVIL-DENGK--VLS 132 (569)
Q Consensus 111 ~~~~v~~~P~~~li-d~~G~--i~~ 132 (569)
+.|+|.++|+++++ +++|+ ++.
T Consensus 86 ~~~~v~~~Pt~~~~~~~~g~g~~~~ 110 (133)
T 3cxg_A 86 DQHNIKALPTFEFYFNLNNEWVLVH 110 (133)
T ss_dssp HHTTCCSSSEEEEEEEETTEEEEEE
T ss_pred HhcCCCCCCEEEEEEecCCCeEEEE
Confidence 99999999999998 44665 554
No 360
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.26 E-value=3.7e-12 Score=108.38 Aligned_cols=68 Identities=18% Similarity=0.292 Sum_probs=60.1
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
.++ ++|+||++||++|+.+.|.+.++++++.. ++.++.|+++... .+++.|+|
T Consensus 20 ~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~------------------------~~~~~~~v 73 (122)
T 3aps_A 20 GKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG--KVRAGKVDCQAYP------------------------QTCQKAGI 73 (122)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TCEEEEEETTTCH------------------------HHHHHTTC
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEeCcCCH------------------------HHHHHcCC
Confidence 577 99999999999999999999999999875 4899999998764 48899999
Q ss_pred CCccEEEEECCCCcE
Q 008336 116 MGIPHLVILDENGKV 130 (569)
Q Consensus 116 ~~~P~~~lid~~G~i 130 (569)
.++|++++++.+|++
T Consensus 74 ~~~Pt~~~~~~~~~~ 88 (122)
T 3aps_A 74 KAYPSVKLYQYERAK 88 (122)
T ss_dssp CSSSEEEEEEEEGGG
T ss_pred CccceEEEEeCCCcc
Confidence 999999999877653
No 361
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.26 E-value=2.2e-12 Score=109.11 Aligned_cols=72 Identities=26% Similarity=0.553 Sum_probs=60.1
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
.+++++|+||++||++|+++.|.|.+++++++....++.++.|+.+... .+++.|+|
T Consensus 23 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-----------------------~~~~~~~v 79 (120)
T 1mek_A 23 AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEES-----------------------DLAQQYGV 79 (120)
T ss_dssp HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCC-----------------------SSHHHHTC
T ss_pred cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCH-----------------------HHHHHCCC
Confidence 4799999999999999999999999999998754335777777766543 47889999
Q ss_pred CCccEEEEECCCCcEE
Q 008336 436 SGIPMLVAIGPSGRTI 451 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~ 451 (569)
+++|+++++ ++|+++
T Consensus 80 ~~~Pt~~~~-~~g~~~ 94 (120)
T 1mek_A 80 RGYPTIKFF-RNGDTA 94 (120)
T ss_dssp CSSSEEEEE-ESSCSS
T ss_pred CcccEEEEE-eCCCcC
Confidence 999999999 678754
No 362
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.26 E-value=2.8e-11 Score=104.54 Aligned_cols=83 Identities=20% Similarity=0.426 Sum_probs=64.7
Q ss_pred cCCCceeecCC-CCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcC--CCCEEEEEEeCCCCHHHHHHHHHhCCCccccc
Q 008336 25 RSNGDQVKLDS-LKGK-IGLYFSASWCGPCQRFTPILAEVYNELSR--QGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPF 100 (569)
Q Consensus 25 ~~~g~~v~l~~-~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~--~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~ 100 (569)
.++.+.+...- -.++ ++|+||++||++|+.+.|.+.++++++.. .+++.++.|+++.+.
T Consensus 11 ~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~----------------- 73 (133)
T 1x5d_A 11 ELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQ----------------- 73 (133)
T ss_dssp ECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCC-----------------
T ss_pred EcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCH-----------------
Confidence 34444443221 2467 99999999999999999999999999872 125999999988652
Q ss_pred CCchhHHHHHHhcCCCCccEEEEECCCCcEEE
Q 008336 101 SDSETRDKLDELFKVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 101 ~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~ 132 (569)
.+++.|+|.++|+++++++ |+++.
T Consensus 74 -------~l~~~~~v~~~Pt~~~~~~-g~~~~ 97 (133)
T 1x5d_A 74 -------VLASRYGIRGFPTIKIFQK-GESPV 97 (133)
T ss_dssp -------HHHHHHTCCSSSEEEEEET-TEEEE
T ss_pred -------HHHHhCCCCeeCeEEEEeC-CCceE
Confidence 5889999999999999976 76543
No 363
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.25 E-value=1.4e-11 Score=101.65 Aligned_cols=70 Identities=23% Similarity=0.519 Sum_probs=61.3
Q ss_pred CCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhc
Q 008336 35 SLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELF 113 (569)
Q Consensus 35 ~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 113 (569)
+.+++ ++|+||++||++|+.+.|.+.+++++++ ++.++.|+++... .+++.|
T Consensus 17 ~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~---~~~~~~vd~~~~~------------------------~~~~~~ 69 (105)
T 3m9j_A 17 AAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS---NVIFLEVDVDDCQ------------------------DVASES 69 (105)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHST---TSEEEEEETTTCH------------------------HHHHHT
T ss_pred hcCCCeEEEEEECCCChhhHHHHHHHHHHHHHcc---CeEEEEEEhhhhH------------------------HHHHHc
Confidence 34688 9999999999999999999999999885 3889999998764 488999
Q ss_pred CCCCccEEEEECCCCcEEE
Q 008336 114 KVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 114 ~v~~~P~~~lid~~G~i~~ 132 (569)
++.++|+++++ ++|+++.
T Consensus 70 ~v~~~Pt~~~~-~~g~~~~ 87 (105)
T 3m9j_A 70 EVKSMPTFQFF-KKGQKVG 87 (105)
T ss_dssp TCCBSSEEEEE-ETTEEEE
T ss_pred CCCcCcEEEEE-ECCeEEE
Confidence 99999999999 7787765
No 364
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.25 E-value=3.1e-12 Score=111.21 Aligned_cols=76 Identities=25% Similarity=0.304 Sum_probs=60.9
Q ss_pred EEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCCCc
Q 008336 359 TILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVSGI 438 (569)
Q Consensus 359 ~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~ 438 (569)
+++|+||++||++|+.+.|.|.+++++++ +.++.|+++..... ...+...++++.|+|.++
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-----v~~~~vd~~~~~~~--------------~~~d~~~~l~~~~~v~~~ 93 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEVD-----VPIVMFIWGSLIGE--------------RELSAARLEMNKAGVEGT 93 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTCC-----SCEEEEEECTTCCH--------------HHHHHHHHHHHHHTCCSS
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHCC-----CEEEEEECCCchhh--------------hhhhhhHHHHHHcCCcee
Confidence 89999999999999999999999887763 67888888643221 011234578999999999
Q ss_pred cEEEEECCCCcEEEcc
Q 008336 439 PMLVAIGPSGRTITKE 454 (569)
Q Consensus 439 Pt~~lid~~G~i~~~~ 454 (569)
||+++++ +|+++.+.
T Consensus 94 Pt~~~~~-~G~~v~~~ 108 (135)
T 3emx_A 94 PTLVFYK-EGRIVDKL 108 (135)
T ss_dssp SEEEEEE-TTEEEEEE
T ss_pred CeEEEEc-CCEEEEEE
Confidence 9999996 99998874
No 365
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.25 E-value=1.7e-11 Score=108.90 Aligned_cols=68 Identities=16% Similarity=0.452 Sum_probs=61.0
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
+++ ++|+||++||++|+.+.|.|.++++++. ++.++.|+++... .+++.|+|
T Consensus 31 ~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~---~v~~~~vd~~~~~------------------------~l~~~~~v 83 (153)
T 2wz9_A 31 AKSLLVVHFWAPWAPQCAQMNEVMAELAKELP---QVSFVKLEAEGVP------------------------EVSEKYEI 83 (153)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSH------------------------HHHHHTTC
T ss_pred CCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC---CeEEEEEECCCCH------------------------HHHHHcCC
Confidence 588 9999999999999999999999999873 4899999998763 48899999
Q ss_pred CCccEEEEECCCCcEEE
Q 008336 116 MGIPHLVILDENGKVLS 132 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~ 132 (569)
.++|++++++ +|+++.
T Consensus 84 ~~~Pt~~~~~-~G~~~~ 99 (153)
T 2wz9_A 84 SSVPTFLFFK-NSQKID 99 (153)
T ss_dssp CSSSEEEEEE-TTEEEE
T ss_pred CCCCEEEEEE-CCEEEE
Confidence 9999999998 898875
No 366
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.25 E-value=1.8e-11 Score=102.95 Aligned_cols=68 Identities=24% Similarity=0.602 Sum_probs=60.1
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
+|+ ++|+||++||++|+.+.|.|.++++++. ++.++.|+++.+. .+++.|++
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~---~v~~~~vd~~~~~------------------------~l~~~~~v 81 (114)
T 2oe3_A 29 QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYP---DVRFVKCDVDESP------------------------DIAKECEV 81 (114)
T ss_dssp HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCT---TSEEEEEETTTCH------------------------HHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CCEEEEEECCCCH------------------------HHHHHCCC
Confidence 578 9999999999999999999999999875 2889999998764 48899999
Q ss_pred CCccEEEEECCCCcEEE
Q 008336 116 MGIPHLVILDENGKVLS 132 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~ 132 (569)
.++|+++++ ++|+++.
T Consensus 82 ~~~Pt~~~~-~~G~~~~ 97 (114)
T 2oe3_A 82 TAMPTFVLG-KDGQLIG 97 (114)
T ss_dssp CSBSEEEEE-ETTEEEE
T ss_pred CcccEEEEE-eCCeEEE
Confidence 999999887 8898875
No 367
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.25 E-value=1.5e-11 Score=104.17 Aligned_cols=69 Identities=30% Similarity=0.561 Sum_probs=59.9
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
.++ ++|+||++||++|+.+.|.|.++++++ . ++.++.|+++.+. .+++.|+|
T Consensus 22 ~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~--~-~v~~~~vd~~~~~------------------------~~~~~~~i 74 (118)
T 2f51_A 22 APGLVLVDFFATWCGPCQRLGQILPSIAEAN--K-DVTFIKVDVDKNG------------------------NAADAYGV 74 (118)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHC--T-TSEEEEEETTTCH------------------------HHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHC--C-CeEEEEEECCCCH------------------------HHHHhcCC
Confidence 478 999999999999999999999999998 2 5899999998764 48899999
Q ss_pred CCccEEEEECC---CCcEEE
Q 008336 116 MGIPHLVILDE---NGKVLS 132 (569)
Q Consensus 116 ~~~P~~~lid~---~G~i~~ 132 (569)
.++|++++++. +|+++.
T Consensus 75 ~~~Pt~~~~~~~~~~G~~~~ 94 (118)
T 2f51_A 75 SSIPALFFVKKEGNEIKTLD 94 (118)
T ss_dssp CSSSEEEEEEEETTEEEEEE
T ss_pred CCCCEEEEEeCCCCcceEEE
Confidence 99999999965 266654
No 368
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.24 E-value=2.8e-11 Score=128.47 Aligned_cols=188 Identities=11% Similarity=0.107 Sum_probs=114.5
Q ss_pred cCcEEEEEEecCCcccchhhhHHHHHHHHHHhcCCCceEEEEeeccccHHHHHHHhcCCCcccccCCchhHHHHHhhccc
Q 008336 196 EGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLARYFEL 275 (569)
Q Consensus 196 ~gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ei~~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~f~v 275 (569)
.++.+++.|+++||++|+.+.|.+.++++++.+.+..+.++.++++.++ ...+++.|+|
T Consensus 29 ~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~---------------------~~~l~~~~~V 87 (519)
T 3t58_A 29 SSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEET---------------------NSAVCREFNI 87 (519)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGG---------------------GHHHHHHTTC
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccc---------------------cHHHHHHcCC
Confidence 4689999999999999999999999999999874445666666665433 5688999999
Q ss_pred CCCceEEEECC---CCCchhhhhHHHHHhhCCCCCCCChHHHHHHHHHHHHHHhhhhhhhhhccCCccceecCCCCce--
Q 008336 276 STLPTLVIIGP---DGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGDLDFVVGKNGGKV-- 350 (569)
Q Consensus 276 ~~~Ptlvi~~~---~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~f~~~~~g~~v-- 350 (569)
.++||+++++. +|+.... .+| ..+.+.+.+++........ .... ...|.+.. .+.+.+
T Consensus 88 ~~~PTl~~f~~g~~~G~~~~~-------~~g----~~~~~~L~~~l~~~l~~~~----~~~P-~~~p~l~~-it~~~l~~ 150 (519)
T 3t58_A 88 AGFPTVRFFQAFTKNGSGATL-------PGA----GANVQTLRMRLIDALESHR----DTWP-PACPPLEP-AKLNDIDG 150 (519)
T ss_dssp CSBSEEEEECTTCCSCCCEEE-------CCS----SCCHHHHHHHHHHHHTTCC----SCCC-TTCCCCSB-CCHHHHTT
T ss_pred cccCEEEEEcCcccCCCceeE-------ecC----CCCHHHHHHHHHHHHhhcc----ccCC-CCCCccCc-CCHHHHHH
Confidence 99999999986 3332111 111 2356666666554332111 0000 00111111 000000
Q ss_pred ecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHH
Q 008336 351 PVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLS 430 (569)
Q Consensus 351 ~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~ 430 (569)
-+..-..++++|.|.... .....++...+... ..+.|-.+ .+.+ ..++
T Consensus 151 ~l~~~~~~~vallF~~~~-------s~~~~~~~ldl~~~-~~v~v~~v-~~~~-----------------------~~l~ 198 (519)
T 3t58_A 151 FFTRNKADYLALVFERED-------SYLGREVTLDLSQY-HAVAVRRV-LNTE-----------------------SDLV 198 (519)
T ss_dssp GGGSCCCSEEEEEEECTT-------CCHHHHHHHHTTTC-TTEEEEEE-ETTC-----------------------HHHH
T ss_pred HhccCCCCeEEEEecCCc-------hHHHHHHHHHhhcc-CCeeEEEe-cCch-----------------------HHHH
Confidence 011123568888888543 12334444444432 23444333 2322 3589
Q ss_pred HhcCCCCccEEEEECCCCcEEEc
Q 008336 431 RKFKVSGIPMLVAIGPSGRTITK 453 (569)
Q Consensus 431 ~~~~v~~~Pt~~lid~~G~i~~~ 453 (569)
+.|+|+.+|++++++++|++...
T Consensus 199 ~kfgV~~~Pslvl~~~nGk~~~~ 221 (519)
T 3t58_A 199 NKFGVTDFPSCYLLLRNGSVSRV 221 (519)
T ss_dssp HHHTCCCSSEEEEEETTSCEEEC
T ss_pred HHcCCCCCCeEEEEeCCCceeec
Confidence 99999999999999999987544
No 369
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.24 E-value=2.2e-11 Score=99.90 Aligned_cols=68 Identities=22% Similarity=0.565 Sum_probs=60.5
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
+++ ++|+||++||++|+.+.|.+.++++.+++ +.++.|+++.+. .+++.|++
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~v~~~~~~------------------------~~~~~~~v 67 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ---VGFGKLNSDENP------------------------DIAARYGV 67 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT---SEEEEEETTTCH------------------------HHHHHTTC
T ss_pred cCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC---ceEEEEECCCCH------------------------HHHHhCCc
Confidence 578 99999999999999999999999998853 889999998763 48899999
Q ss_pred CCccEEEEECCCCcEEE
Q 008336 116 MGIPHLVILDENGKVLS 132 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~ 132 (569)
.++|+++++ ++|+++.
T Consensus 68 ~~~Pt~~~~-~~g~~~~ 83 (104)
T 2e0q_A 68 MSLPTVIFF-KDGEPVD 83 (104)
T ss_dssp CSSCEEEEE-ETTEEEE
T ss_pred cccCEEEEE-ECCeEhh
Confidence 999999999 8898865
No 370
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.24 E-value=5.4e-11 Score=97.95 Aligned_cols=69 Identities=26% Similarity=0.585 Sum_probs=60.6
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
.++ ++|+||++||++|+.+.|.+.+++++++. ++.++.|+++.+. .+++.|++
T Consensus 17 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~------------------------~~~~~~~v 70 (105)
T 1fb6_A 17 SEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG--KIAVYKLNTDEAP------------------------GIATQYNI 70 (105)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCH------------------------HHHHHTTC
T ss_pred CCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC--ceEEEEEcCcchH------------------------HHHHhCCC
Confidence 467 99999999999999999999999999864 4889999998763 48899999
Q ss_pred CCccEEEEECCCCcEEE
Q 008336 116 MGIPHLVILDENGKVLS 132 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~ 132 (569)
.++|+++++ ++|+++.
T Consensus 71 ~~~Pt~~~~-~~g~~~~ 86 (105)
T 1fb6_A 71 RSIPTVLFF-KNGERKE 86 (105)
T ss_dssp CSSSEEEEE-ETTEEEE
T ss_pred CcccEEEEE-eCCeEEE
Confidence 999998888 6898865
No 371
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.23 E-value=2.5e-11 Score=103.81 Aligned_cols=68 Identities=24% Similarity=0.584 Sum_probs=60.4
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
.++ ++|+|||+||++|+.+.|.|.++++++. ++.++.|+++... .+++.|+|
T Consensus 36 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~---~v~~~~vd~d~~~------------------------~l~~~~~v 88 (125)
T 1r26_A 36 EDILTVAWFTAVWCGPCKTIERPMEKIAYEFP---TVKFAKVDADNNS------------------------EIVSKCRV 88 (125)
T ss_dssp SSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT---TSEEEEEETTTCH------------------------HHHHHTTC
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC---CCEEEEEECCCCH------------------------HHHHHcCC
Confidence 678 9999999999999999999999999983 4899999998763 48899999
Q ss_pred CCccEEEEECCCCcEEE
Q 008336 116 MGIPHLVILDENGKVLS 132 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~ 132 (569)
.++|+++++ ++|+++.
T Consensus 89 ~~~Pt~~i~-~~G~~~~ 104 (125)
T 1r26_A 89 LQLPTFIIA-RSGKMLG 104 (125)
T ss_dssp CSSSEEEEE-ETTEEEE
T ss_pred CcccEEEEE-eCCeEEE
Confidence 999998888 7898865
No 372
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.23 E-value=1.8e-11 Score=103.15 Aligned_cols=87 Identities=13% Similarity=0.178 Sum_probs=67.1
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
+++ |+|+|||+||++|+.+.|.|.++++++. ++.++.|++|.. ...|+|
T Consensus 22 ~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~---~v~f~kvd~d~~---------------------------~~~~~v 71 (118)
T 3evi_A 22 EDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP---ETKFVKAIVNSC---------------------------IQHYHD 71 (118)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT---TSEEEEEEGGGT---------------------------STTCCG
T ss_pred CCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC---CCEEEEEEhHHh---------------------------HHHCCC
Confidence 356 9999999999999999999999999985 478888888732 267999
Q ss_pred CCccEEEEECCCCcEEEcC-CcceeecccCCCCCccHHHHHHHHH
Q 008336 116 MGIPHLVILDENGKVLSDG-GVEIIREYGVEGYPFTVERIKEMKE 159 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~ 159 (569)
.++||++++ ++|+.+.+- |.. ..+ +-.++.+.++.++.
T Consensus 72 ~~~PT~~~f-k~G~~v~~~~G~~---~~g--g~~~~~~~le~~L~ 110 (118)
T 3evi_A 72 NCLPTIFVY-KNGQIEAKFIGII---ECG--GINLKLEELEWKLA 110 (118)
T ss_dssp GGCSEEEEE-ETTEEEEEEESTT---TTT--CSSCCHHHHHHHHH
T ss_pred CCCCEEEEE-ECCEEEEEEeChh---hhC--CCCCCHHHHHHHHH
Confidence 999999999 789888752 111 111 12567778777664
No 373
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.23 E-value=2.9e-11 Score=100.95 Aligned_cols=68 Identities=24% Similarity=0.525 Sum_probs=60.2
Q ss_pred Cc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCCC
Q 008336 38 GK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVM 116 (569)
Q Consensus 38 gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 116 (569)
++ ++|+||++||++|+.+.|.|.++++++.. ++.++.|+++... .+++.|++.
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~~~~------------------------~~~~~~~v~ 77 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAG--KVIFLKVDVDAVA------------------------AVAEAAGIT 77 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTTH------------------------HHHHHHTCC
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC--CeEEEEEECCchH------------------------HHHHHcCCC
Confidence 78 99999999999999999999999999864 4899999998653 488999999
Q ss_pred CccEEEEECCCCcEEE
Q 008336 117 GIPHLVILDENGKVLS 132 (569)
Q Consensus 117 ~~P~~~lid~~G~i~~ 132 (569)
++|+++++ ++|+++.
T Consensus 78 ~~Pt~~~~-~~G~~~~ 92 (112)
T 1ep7_A 78 AMPTFHVY-KDGVKAD 92 (112)
T ss_dssp BSSEEEEE-ETTEEEE
T ss_pred cccEEEEE-ECCeEEE
Confidence 99998877 7898875
No 374
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.23 E-value=1.6e-11 Score=103.70 Aligned_cols=70 Identities=24% Similarity=0.608 Sum_probs=60.3
Q ss_pred CCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHh
Q 008336 34 DSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDEL 112 (569)
Q Consensus 34 ~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 112 (569)
++.+|+ ++|+|||+||++|+.+.|.+.++++++ ++.++.|+++... .+++.
T Consensus 29 ~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~----~~~~~~vd~~~~~------------------------~~~~~ 80 (117)
T 2xc2_A 29 EQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY----DAIFVKVDVDKLE------------------------ETARK 80 (117)
T ss_dssp HHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS----SSEEEEEETTTSH------------------------HHHHH
T ss_pred HhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc----CcEEEEEECCccH------------------------HHHHH
Confidence 334788 999999999999999999999998877 3889999998653 48899
Q ss_pred cCCCCccEEEEECCCCcEEE
Q 008336 113 FKVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 113 ~~v~~~P~~~lid~~G~i~~ 132 (569)
|+|.++|+++++ ++|+++.
T Consensus 81 ~~v~~~Pt~~~~-~~G~~~~ 99 (117)
T 2xc2_A 81 YNISAMPTFIAI-KNGEKVG 99 (117)
T ss_dssp TTCCSSSEEEEE-ETTEEEE
T ss_pred cCCCccceEEEE-eCCcEEE
Confidence 999999998888 7898875
No 375
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.23 E-value=1.6e-11 Score=115.24 Aligned_cols=82 Identities=20% Similarity=0.269 Sum_probs=67.9
Q ss_pred ecCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCC
Q 008336 24 IRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSD 102 (569)
Q Consensus 24 ~~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~ 102 (569)
.+++++.+......|+ ++|+|||+||++|+.+.|.+.++++++.. .+.++.|+++...
T Consensus 100 ~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~--~v~~~~vd~~~~~------------------- 158 (210)
T 3apq_A 100 ITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG--LLRIGAVNCGDDR------------------- 158 (210)
T ss_dssp EECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT--TBEEEEEETTTCH-------------------
T ss_pred EEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC--ceEEEEEECCccH-------------------
Confidence 3455555544445688 99999999999999999999999999864 4999999998764
Q ss_pred chhHHHHHHhcCCCCccEEEEECCCCcEEE
Q 008336 103 SETRDKLDELFKVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 103 ~~~~~~l~~~~~v~~~P~~~lid~~G~i~~ 132 (569)
.+++.|+|.++|+++++ ++|+++.
T Consensus 159 -----~l~~~~~v~~~Pt~~~~-~~G~~~~ 182 (210)
T 3apq_A 159 -----MLCRMKGVNSYPSLFIF-RSGMAAV 182 (210)
T ss_dssp -----HHHHHTTCCSSSEEEEE-CTTSCCE
T ss_pred -----HHHHHcCCCcCCeEEEE-ECCCcee
Confidence 48899999999999999 8887644
No 376
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.23 E-value=2.2e-11 Score=106.23 Aligned_cols=74 Identities=23% Similarity=0.518 Sum_probs=63.9
Q ss_pred eecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHH
Q 008336 31 VKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKL 109 (569)
Q Consensus 31 v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 109 (569)
+..+..+|+ ++|+||++||++|+.+.|.|.++++++. ++.++.|++|... .+
T Consensus 39 ~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~---~v~~~~v~~~~~~------------------------~~ 91 (139)
T 3d22_A 39 LSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP---SLMFLVIDVDELS------------------------DF 91 (139)
T ss_dssp HHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSH------------------------HH
T ss_pred HHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CCEEEEEeCcccH------------------------HH
Confidence 444445689 9999999999999999999999999874 4899999998663 48
Q ss_pred HHhcCCCCccEEEEECCCCcEEE
Q 008336 110 DELFKVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 110 ~~~~~v~~~P~~~lid~~G~i~~ 132 (569)
++.|+|.++|+++++ ++|+++.
T Consensus 92 ~~~~~v~~~Pt~~~~-~~G~~~~ 113 (139)
T 3d22_A 92 SASWEIKATPTFFFL-RDGQQVD 113 (139)
T ss_dssp HHHTTCCEESEEEEE-ETTEEEE
T ss_pred HHHcCCCcccEEEEE-cCCeEEE
Confidence 899999999999988 8998875
No 377
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.22 E-value=3.3e-11 Score=102.42 Aligned_cols=68 Identities=29% Similarity=0.654 Sum_probs=60.1
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
.++ ++|+||++||++|+.+.|.|.++++++. ++.++.|+++.+. .+++.|++
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~vd~~~~~------------------------~~~~~~~v 85 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMAPVFADLAKKFP---NAVFLKVDVDELK------------------------PIAEQFSV 85 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTCH------------------------HHHHHTTC
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CcEEEEEECCCCH------------------------HHHHHcCC
Confidence 578 9999999999999999999999999875 2889999998763 48899999
Q ss_pred CCccEEEEECCCCcEEE
Q 008336 116 MGIPHLVILDENGKVLS 132 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~ 132 (569)
.++|+++++ ++|+++.
T Consensus 86 ~~~Pt~~~~-~~G~~~~ 101 (122)
T 2vlu_A 86 EAMPTFLFM-KEGDVKD 101 (122)
T ss_dssp CSSSEEEEE-ETTEEEE
T ss_pred CcccEEEEE-eCCEEEE
Confidence 999998888 7898875
No 378
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.22 E-value=4.9e-12 Score=108.59 Aligned_cols=70 Identities=10% Similarity=0.200 Sum_probs=61.4
Q ss_pred CCc-EEEEEecCC--CHhhHhhHHHHHHHHHHhcCCCC-EEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHh
Q 008336 37 KGK-IGLYFSASW--CGPCQRFTPILAEVYNELSRQGD-FEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDEL 112 (569)
Q Consensus 37 ~gk-vlv~F~a~w--C~~C~~~~p~l~~~~~~~~~~g~-~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 112 (569)
.++ |||+|||+| |++|+.+.|.|.+++++|.. + +.|+.|++|.++ .++..
T Consensus 33 ~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g--~~v~~~KVdvDe~~------------------------~lA~~ 86 (140)
T 2qgv_A 33 QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPD--YTWQVAIADLEQSE------------------------AIGDR 86 (140)
T ss_dssp TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTT--SCCEEEECCHHHHH------------------------HHHHH
T ss_pred CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCC--CeEEEEEEECCCCH------------------------HHHHH
Confidence 456 999999999 99999999999999999864 4 889988888553 59999
Q ss_pred cCCCCccEEEEECCCCcEEEc
Q 008336 113 FKVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 113 ~~v~~~P~~~lid~~G~i~~~ 133 (569)
|+|+++||+++| ++|+++.+
T Consensus 87 ygV~sIPTlilF-k~G~~v~~ 106 (140)
T 2qgv_A 87 FGAFRFPATLVF-TGGNYRGV 106 (140)
T ss_dssp HTCCSSSEEEEE-ETTEEEEE
T ss_pred cCCccCCEEEEE-ECCEEEEE
Confidence 999999999999 89998864
No 379
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.22 E-value=1.9e-11 Score=96.59 Aligned_cols=64 Identities=19% Similarity=0.433 Sum_probs=56.4
Q ss_pred CEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCCC
Q 008336 358 KTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVSG 437 (569)
Q Consensus 358 k~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~ 437 (569)
.++++.||++||++|+++.|.|+++++++++ ++.++.|++|.++ ++++.|++++
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~vd~~~~~-----------------------~~~~~~~v~~ 56 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD---AVEVEYINVMENP-----------------------QKAMEYGIMA 56 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS---SEEEEEEESSSSC-----------------------CTTTSTTTCC
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC---ceEEEEEECCCCH-----------------------HHHHHCCCcc
Confidence 5789999999999999999999999998864 4899999988664 3788999999
Q ss_pred ccEEEEECCCCcE
Q 008336 438 IPMLVAIGPSGRT 450 (569)
Q Consensus 438 ~Pt~~lid~~G~i 450 (569)
+||+++ +|++
T Consensus 57 ~Pt~~~---~G~~ 66 (85)
T 1fo5_A 57 VPTIVI---NGDV 66 (85)
T ss_dssp SSEEEE---TTEE
T ss_pred cCEEEE---CCEE
Confidence 999999 7887
No 380
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.22 E-value=9.8e-11 Score=102.22 Aligned_cols=81 Identities=26% Similarity=0.516 Sum_probs=61.2
Q ss_pred cCCCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCc
Q 008336 25 RSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDS 103 (569)
Q Consensus 25 ~~~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~ 103 (569)
.++++.+...-..++ ++|+||++||++|+.+.|.|.++++++.. ++.++.|+++.+.
T Consensus 37 ~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~-------------------- 94 (140)
T 1v98_A 37 EADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAG--RLKVVKVNVDEHP-------------------- 94 (140)
T ss_dssp ------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCH--------------------
T ss_pred cCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccC--ceEEEEEECCCCH--------------------
Confidence 455655554444566 99999999999999999999999999864 4999999998764
Q ss_pred hhHHHHHHhcCCCCccEEEEECCCCcEEE
Q 008336 104 ETRDKLDELFKVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 104 ~~~~~l~~~~~v~~~P~~~lid~~G~i~~ 132 (569)
.+++.|++.++|+++++ ++|+++.
T Consensus 95 ----~l~~~~~v~~~Pt~~~~-~~G~~~~ 118 (140)
T 1v98_A 95 ----GLAARYGVRSVPTLVLF-RRGAPVA 118 (140)
T ss_dssp ----HHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ----HHHHHCCCCccCEEEEE-eCCcEEE
Confidence 48899999999999999 7898865
No 381
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.21 E-value=5.1e-12 Score=110.50 Aligned_cols=92 Identities=9% Similarity=0.126 Sum_probs=60.0
Q ss_pred CCEEEEEEecCC--ChhHHhhhHHHHHHHHHHhhcCCCeE--EEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHh
Q 008336 357 GKTILLYFSAHW--CPPCRAFLPKLIDAYKKIKERNESLE--VVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRK 432 (569)
Q Consensus 357 gk~vll~F~a~w--C~~C~~~~~~l~~l~~~~~~~~~~~~--vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~ 432 (569)
++.++|+||++| |++|+.+.|.|.++++++ ++ +. ++.|++|.. .++++.
T Consensus 34 ~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~---v~~~~~~Vd~d~~-----------------------~~la~~ 86 (142)
T 2es7_A 34 VGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQ---FDWQVAVADLEQS-----------------------EAIGDR 86 (142)
T ss_dssp CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TT---SCCEEEEECHHHH-----------------------HHHHHT
T ss_pred CCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cc---cceeEEEEECCCC-----------------------HHHHHh
Confidence 345788899887 999999999999999988 43 67 778776643 358999
Q ss_pred cCCCCccEEEEECCCCcEEEccchhhHhhcCCCCCCCCHHHHHHHHHHhhhhhcCCCc
Q 008336 433 FKVSGIPMLVAIGPSGRTITKEARDMIAVHGAEAYPFTEERMKEIDGQYNEMAKGWPE 490 (569)
Q Consensus 433 ~~v~~~Pt~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~l~~~l~~l~~~~~~ 490 (569)
|+|+++||+++| ++|+++.+..|. .. .++|.+.|++++...+.
T Consensus 87 ~~V~~iPT~~~f-k~G~~v~~~~G~-----------~~---~~~l~~~i~~~l~~~~~ 129 (142)
T 2es7_A 87 FNVRRFPATLVF-TDGKLRGALSGI-----------HP---WAELLTLMRSIVDTPAA 129 (142)
T ss_dssp TTCCSSSEEEEE-SCC----CEESC-----------CC---HHHHHHHHHHHHC----
T ss_pred cCCCcCCeEEEE-eCCEEEEEEeCC-----------CC---HHHHHHHHHHHhccccc
Confidence 999999999999 899998874321 12 24466666666654433
No 382
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.21 E-value=5.6e-11 Score=98.04 Aligned_cols=70 Identities=31% Similarity=0.657 Sum_probs=61.0
Q ss_pred CCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcC
Q 008336 36 LKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFK 114 (569)
Q Consensus 36 ~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 114 (569)
.+++ ++|+||++||++|+.+.|.+.+++++++. ++.++.|+++.+. .+++.|+
T Consensus 18 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~------------------------~~~~~~~ 71 (106)
T 1xwb_A 18 ASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD--NVVVLKVDVDECE------------------------DIAMEYN 71 (106)
T ss_dssp HTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCH------------------------HHHHHTT
T ss_pred cCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC--CeEEEEEeccchH------------------------HHHHHcC
Confidence 3688 99999999999999999999999999863 5999999998663 4889999
Q ss_pred CCCccEEEEECCCCcEEE
Q 008336 115 VMGIPHLVILDENGKVLS 132 (569)
Q Consensus 115 v~~~P~~~lid~~G~i~~ 132 (569)
+.++|+++++ ++|+++.
T Consensus 72 v~~~Pt~~~~-~~G~~~~ 88 (106)
T 1xwb_A 72 ISSMPTFVFL-KNGVKVE 88 (106)
T ss_dssp CCSSSEEEEE-ETTEEEE
T ss_pred CCcccEEEEE-cCCcEEE
Confidence 9999998887 6888765
No 383
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.21 E-value=1.8e-11 Score=96.73 Aligned_cols=63 Identities=17% Similarity=0.341 Sum_probs=55.3
Q ss_pred EEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCCCc
Q 008336 359 TILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVSGI 438 (569)
Q Consensus 359 ~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~ 438 (569)
+++++||++||++|+++.|.|++++++++++ +.++.|++|.++ ++++.|+++++
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~vd~~~~~-----------------------~~~~~~~v~~~ 56 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDK---IDVEKIDIMVDR-----------------------EKAIEYGLMAV 56 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSS---CCEEEECTTTCG-----------------------GGGGGTCSSCS
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCC---eEEEEEECCCCH-----------------------HHHHhCCceee
Confidence 4689999999999999999999999998753 889999888664 47889999999
Q ss_pred cEEEEECCCCcE
Q 008336 439 PMLVAIGPSGRT 450 (569)
Q Consensus 439 Pt~~lid~~G~i 450 (569)
||+++ +|++
T Consensus 57 Pt~~~---~G~~ 65 (85)
T 1nho_A 57 PAIAI---NGVV 65 (85)
T ss_dssp SEEEE---TTTE
T ss_pred CEEEE---CCEE
Confidence 99999 7887
No 384
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.21 E-value=2.7e-11 Score=103.33 Aligned_cols=78 Identities=24% Similarity=0.572 Sum_probs=61.1
Q ss_pred CCCEEEEEEecC-------CChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHH
Q 008336 356 AGKTILLYFSAH-------WCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKAS 428 (569)
Q Consensus 356 ~gk~vll~F~a~-------wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 428 (569)
.+++++|+||++ ||++|+.+.|.|.++++++++ ++.++.|+++... .| . +....
T Consensus 23 ~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~---~~~~~~vd~~~~~-~~---~------------d~~~~ 83 (123)
T 1wou_A 23 NGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE---GCVFIYCQVGEKP-YW---K------------DPNND 83 (123)
T ss_dssp TTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT---TEEEEEEECCCHH-HH---H------------CTTCH
T ss_pred CCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC---CcEEEEEECCCch-hh---h------------chhHH
Confidence 489999999999 999999999999999888754 4889999886321 11 1 22346
Q ss_pred HHHhcCCCCccEEEEECCCCcEEE
Q 008336 429 LSRKFKVSGIPMLVAIGPSGRTIT 452 (569)
Q Consensus 429 l~~~~~v~~~Pt~~lid~~G~i~~ 452 (569)
+++.|+|+++||+++++..+++..
T Consensus 84 ~~~~~~i~~~Pt~~~~~~~~~~~g 107 (123)
T 1wou_A 84 FRKNLKVTAVPTLLKYGTPQKLVE 107 (123)
T ss_dssp HHHHHCCCSSSEEEETTSSCEEEG
T ss_pred HHHHCCCCeeCEEEEEcCCceEec
Confidence 888899999999999987455543
No 385
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.21 E-value=5.4e-11 Score=98.55 Aligned_cols=69 Identities=29% Similarity=0.617 Sum_probs=61.5
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
.++ ++|+||++||++|+.+.|.+.++++++.. ++.++.|+++.+. .+++.|++
T Consensus 17 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~------------------------~~~~~~~v 70 (109)
T 2yzu_A 17 QHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG--KLLVAKLDVDENP------------------------KTAMRYRV 70 (109)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT--TBEEEEEETTTCH------------------------HHHHHTTC
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC--ceEEEEEECCCCH------------------------hHHHhCCC
Confidence 478 99999999999999999999999999874 4999999998764 48899999
Q ss_pred CCccEEEEECCCCcEEE
Q 008336 116 MGIPHLVILDENGKVLS 132 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~ 132 (569)
.++|+++++ ++|+++.
T Consensus 71 ~~~Pt~~~~-~~g~~~~ 86 (109)
T 2yzu_A 71 MSIPTVILF-KDGQPVE 86 (109)
T ss_dssp CSSSEEEEE-ETTEEEE
T ss_pred CcCCEEEEE-eCCcEee
Confidence 999999999 8898775
No 386
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.21 E-value=4e-11 Score=102.27 Aligned_cols=71 Identities=21% Similarity=0.495 Sum_probs=59.6
Q ss_pred CCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhc
Q 008336 35 SLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELF 113 (569)
Q Consensus 35 ~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 113 (569)
+.+|+ ++|+||++||++|+.+.|.+.+++++++ ++.++.|+++... ..+++.|
T Consensus 34 ~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~---~~~~~~vd~~~~~-----------------------~~~~~~~ 87 (124)
T 1faa_A 34 AAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL---DVIFLKLDCNQEN-----------------------KTLAKEL 87 (124)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSTT-----------------------HHHHHHH
T ss_pred hcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC---CCEEEEEecCcch-----------------------HHHHHHc
Confidence 34688 9999999999999999999999999875 3889999987321 2588999
Q ss_pred CCCCccEEEEECCCCcEEE
Q 008336 114 KVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 114 ~v~~~P~~~lid~~G~i~~ 132 (569)
++.++|+++++ ++|+++.
T Consensus 88 ~v~~~Pt~~~~-~~G~~~~ 105 (124)
T 1faa_A 88 GIRVVPTFKIL-KENSVVG 105 (124)
T ss_dssp CCSSSSEEEEE-ETTEEEE
T ss_pred CCCeeeEEEEE-eCCcEEE
Confidence 99999996666 7898875
No 387
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.20 E-value=2.6e-11 Score=119.72 Aligned_cols=71 Identities=20% Similarity=0.408 Sum_probs=63.2
Q ss_pred CCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhc
Q 008336 35 SLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELF 113 (569)
Q Consensus 35 ~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 113 (569)
..+|+ |+|+|||+||++|+.+.|.+.++++++++ ++.++.|+++.++ .+++.|
T Consensus 23 ~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~--~~~~~~vd~~~~~------------------------~~~~~~ 76 (287)
T 3qou_A 23 QSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNG--QFILAKLDCDAEQ------------------------MIAAQF 76 (287)
T ss_dssp TTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS--SSEEEEEETTTCH------------------------HHHHTT
T ss_pred hcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCC--CeEEEEEeCccCH------------------------HHHHHc
Confidence 34588 99999999999999999999999999974 4899999999764 488999
Q ss_pred CCCCccEEEEECCCCcEEE
Q 008336 114 KVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 114 ~v~~~P~~~lid~~G~i~~ 132 (569)
+|.++||++++ ++|+++.
T Consensus 77 ~v~~~Pt~~~~-~~G~~~~ 94 (287)
T 3qou_A 77 GLRAIPTVYLF-QNGQPVD 94 (287)
T ss_dssp TCCSSSEEEEE-ETTEEEE
T ss_pred CCCCCCeEEEE-ECCEEEE
Confidence 99999999999 7898875
No 388
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.20 E-value=5.2e-11 Score=97.86 Aligned_cols=70 Identities=29% Similarity=0.660 Sum_probs=60.8
Q ss_pred CCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhc
Q 008336 35 SLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELF 113 (569)
Q Consensus 35 ~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 113 (569)
+..++ ++|+||++||++|+.+.|.+.+++++++ ++.++.|+++... .+++.|
T Consensus 16 ~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~------------------------~~~~~~ 68 (104)
T 2vim_A 16 ENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP---EVEFAKVDVDQNE------------------------EAAAKY 68 (104)
T ss_dssp TTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTCH------------------------HHHHHT
T ss_pred hcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC---CCEEEEEeccCCH------------------------HHHHHc
Confidence 34688 9999999999999999999999999875 4899999998663 488999
Q ss_pred CCCCccEEEEECCCCcEEE
Q 008336 114 KVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 114 ~v~~~P~~~lid~~G~i~~ 132 (569)
++.++|+++++ ++|+++.
T Consensus 69 ~v~~~Pt~~~~-~~g~~~~ 86 (104)
T 2vim_A 69 SVTAMPTFVFI-KDGKEVD 86 (104)
T ss_dssp TCCSSSEEEEE-ETTEEEE
T ss_pred CCccccEEEEE-eCCcEEE
Confidence 99999998888 5888765
No 389
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.20 E-value=3.1e-11 Score=104.79 Aligned_cols=68 Identities=12% Similarity=0.104 Sum_probs=57.1
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008336 357 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 436 (569)
Q Consensus 357 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 436 (569)
|+++||+||++||++|+.+.|.|.++++++. ++.++.|+++.. .+.|+|.
T Consensus 30 ~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~----~v~~~~vd~~~~--------------------------~~~~~i~ 79 (135)
T 2dbc_A 30 DLWVVIHLYRSSVPMCLVVNQHLSVLARKFP----ETKFVKAIVNSC--------------------------IEHYHDN 79 (135)
T ss_dssp SCEEEEEECCTTCHHHHHHHHHHHHHHHHCS----SEEEEEECCSSS--------------------------CSSCCSS
T ss_pred CCEEEEEEECCCChHHHHHHHHHHHHHHHCC----CcEEEEEEhhcC--------------------------cccCCCC
Confidence 6899999999999999999999999988874 377777776643 1579999
Q ss_pred CccEEEEECCCCcEEEccc
Q 008336 437 GIPMLVAIGPSGRTITKEA 455 (569)
Q Consensus 437 ~~Pt~~lid~~G~i~~~~~ 455 (569)
++||+++++ +|+++.+..
T Consensus 80 ~~Pt~~~~~-~G~~v~~~~ 97 (135)
T 2dbc_A 80 CLPTIFVYK-NGQIEGKFI 97 (135)
T ss_dssp CCSEEEEES-SSSCSEEEE
T ss_pred CCCEEEEEE-CCEEEEEEE
Confidence 999999995 999887743
No 390
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.19 E-value=2.2e-11 Score=101.66 Aligned_cols=68 Identities=18% Similarity=0.343 Sum_probs=59.4
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
.++ ++|+||++||++|+.+.|.|.++++.+. ++.++.|+++... .+++.|++
T Consensus 18 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~---~v~~~~vd~~~~~------------------------~l~~~~~v 70 (110)
T 2l6c_A 18 GLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP---QVAISSVDSEARP------------------------ELMKELGF 70 (110)
T ss_dssp TCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT---TSCEEEEEGGGCH------------------------HHHHHTTC
T ss_pred cCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC---CcEEEEEcCcCCH------------------------HHHHHcCC
Confidence 467 9999999999999999999999988864 4788888887653 48899999
Q ss_pred CCccEEEEECCCCcEEE
Q 008336 116 MGIPHLVILDENGKVLS 132 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~ 132 (569)
.++|+++++ ++|+++.
T Consensus 71 ~~~Pt~~~~-~~G~~v~ 86 (110)
T 2l6c_A 71 ERVPTLVFI-RDGKVAK 86 (110)
T ss_dssp CSSCEEEEE-ESSSEEE
T ss_pred cccCEEEEE-ECCEEEE
Confidence 999999999 8898875
No 391
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.19 E-value=4.9e-11 Score=112.97 Aligned_cols=85 Identities=31% Similarity=0.572 Sum_probs=67.6
Q ss_pred CceecCCCceeecC-CCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCccc
Q 008336 21 DFLIRSNGDQVKLD-SLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAV 98 (569)
Q Consensus 21 df~~~~~g~~v~l~-~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~ 98 (569)
.....++.+.+... .-.++ ++|+|||+||++|+.+.|.|.++++++++ ++.++.|+++.+.
T Consensus 12 ~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~d~~~--------------- 74 (222)
T 3dxb_A 12 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNP--------------- 74 (222)
T ss_dssp CCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCT---------------
T ss_pred CCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC--CcEEEEEECCCCH---------------
Confidence 33445555555432 22577 99999999999999999999999999875 3899999998653
Q ss_pred ccCCchhHHHHHHhcCCCCccEEEEECCCCcEEE
Q 008336 99 PFSDSETRDKLDELFKVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 99 ~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~ 132 (569)
.+++.|+|.++|+++++ ++|+++.
T Consensus 75 ---------~l~~~~~v~~~Pt~~~~-~~G~~~~ 98 (222)
T 3dxb_A 75 ---------GTAPKYGIRGIPTLLLF-KNGEVAA 98 (222)
T ss_dssp ---------TTGGGGTCCSBSEEEEE-ETTEEEE
T ss_pred ---------HHHHHcCCCcCCEEEEE-ECCeEEE
Confidence 37789999999999999 5788765
No 392
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.19 E-value=6.1e-11 Score=99.19 Aligned_cols=68 Identities=26% Similarity=0.575 Sum_probs=59.7
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
.|+ ++|+||++||++|+.+.|.+.+++++++ ++.++.|+++... .+++.|+|
T Consensus 25 ~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~---~v~~~~vd~~~~~------------------------~~~~~~~v 77 (112)
T 1syr_A 25 QNELVIVDFFAEWCGPCKRIAPFYEECSKTYT---KMVFIKVDVDEVS------------------------EVTEKENI 77 (112)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTTH------------------------HHHHHTTC
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC---CCEEEEEECCCCH------------------------HHHHHcCC
Confidence 578 9999999999999999999999999875 3899999998663 48899999
Q ss_pred CCccEEEEECCCCcEEE
Q 008336 116 MGIPHLVILDENGKVLS 132 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~ 132 (569)
.++|+++++ ++|+++.
T Consensus 78 ~~~Pt~~~~-~~G~~~~ 93 (112)
T 1syr_A 78 TSMPTFKVY-KNGSSVD 93 (112)
T ss_dssp CSSSEEEEE-ETTEEEE
T ss_pred CcccEEEEE-ECCcEEE
Confidence 999998887 6888765
No 393
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.19 E-value=1.6e-12 Score=117.02 Aligned_cols=80 Identities=29% Similarity=0.511 Sum_probs=61.5
Q ss_pred ceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHH
Q 008336 29 DQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRD 107 (569)
Q Consensus 29 ~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (569)
+.++++..+|| +||+|||+||++|+.+.|.|.++.+.+.. ++.++.|+++.+.+
T Consensus 37 ~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~--~~~~~~v~~d~~~~----------------------- 91 (164)
T 1sen_A 37 DGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISEL--SHNFVMVNLEDEEE----------------------- 91 (164)
T ss_dssp HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHH--HTTSEEEEEEGGGS-----------------------
T ss_pred HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhc--CCeEEEEEecCCch-----------------------
Confidence 55666667899 99999999999999999999997765543 25577777764421
Q ss_pred HHHHhcCC--CCccEEEEECCCCcEEEc
Q 008336 108 KLDELFKV--MGIPHLVILDENGKVLSD 133 (569)
Q Consensus 108 ~l~~~~~v--~~~P~~~lid~~G~i~~~ 133 (569)
.+...|++ .++|+++++|++|+++.+
T Consensus 92 ~~~~~~~~~~~~~Pt~~~~d~~G~~~~~ 119 (164)
T 1sen_A 92 PKDEDFSPDGGYIPRILFLDPSGKVHPE 119 (164)
T ss_dssp CSCGGGCTTCSCSSEEEEECTTSCBCTT
T ss_pred HHHHHhcccCCcCCeEEEECCCCCEEEE
Confidence 13456777 669999999999998764
No 394
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.18 E-value=6.6e-12 Score=110.59 Aligned_cols=100 Identities=13% Similarity=0.128 Sum_probs=66.4
Q ss_pred ecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHH--HHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHH
Q 008336 32 KLDSLKGK-IGLYFSASWCGPCQRFTPILAEVY--NELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDK 108 (569)
Q Consensus 32 ~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~--~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (569)
..+...|| |||+|||+||++|+.+.|.+.+.. .++.+ ..++.|++|.+.. .
T Consensus 38 ~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~---~~fv~V~vD~e~~-----------------------~ 91 (151)
T 3ph9_A 38 FYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ---NKFIMLNLMHETT-----------------------D 91 (151)
T ss_dssp HHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH---HTCEEEEESSCCS-----------------------C
T ss_pred HHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh---cCeEEEEecCCch-----------------------h
Confidence 33444689 999999999999999999998642 22221 1255556653211 1
Q ss_pred HHHhcCCCCccEEEEECCCCcEEEcCCcceeecccCCCCCccHHHHHHHHHHH
Q 008336 109 LDELFKVMGIPHLVILDENGKVLSDGGVEIIREYGVEGYPFTVERIKEMKEQE 161 (569)
Q Consensus 109 l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 161 (569)
+...|++.++||++++|++|+++.+. +..++...+.+....+.++++..
T Consensus 92 ~~~~~~v~~~PT~~f~~~~G~~v~~~----~G~~~~~~~~~~~~~~~~ll~~~ 140 (151)
T 3ph9_A 92 KNLSPDGQYVPRIMFVDPSLTVRADI----AGRYSNRLYTYEPRDLPLLIENM 140 (151)
T ss_dssp GGGCTTCCCSSEEEEECTTSCBCTTC----CCSCTTSTTCCCGGGHHHHHHHH
T ss_pred hHhhcCCCCCCEEEEECCCCCEEEEE----eCCcCCcccccchhhHHHHHHHH
Confidence 34678999999999999999988642 22334444556666666666543
No 395
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.18 E-value=8.1e-11 Score=99.72 Aligned_cols=69 Identities=30% Similarity=0.675 Sum_probs=60.8
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
.++ ++|+||++||++|+.+.|.|.+++++++. ++.++.|+++.+. .+++.|+|
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~------------------------~~~~~~~i 82 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAPVLEEIATERAT--DLTVAKLDVDTNP------------------------ETARNFQV 82 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCH------------------------HHHHHTTC
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEECCCCH------------------------HHHHhcCC
Confidence 477 99999999999999999999999999864 4899999998763 48899999
Q ss_pred CCccEEEEECCCCcEEE
Q 008336 116 MGIPHLVILDENGKVLS 132 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~ 132 (569)
.++|+++++ ++|+++.
T Consensus 83 ~~~Pt~~~~-~~g~~~~ 98 (121)
T 2i1u_A 83 VSIPTLILF-KDGQPVK 98 (121)
T ss_dssp CSSSEEEEE-ETTEEEE
T ss_pred CcCCEEEEE-ECCEEEE
Confidence 999999988 5888765
No 396
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.18 E-value=4.2e-11 Score=101.18 Aligned_cols=73 Identities=16% Similarity=0.399 Sum_probs=57.5
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
.|+ ++|+|||+|||+|+++.|.|.++++++. ..++.++++...+ .+....+++.|+|
T Consensus 28 ~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~----~~v~~~~~~~~~~------------------~~~~~~~~~~~~i 85 (118)
T 1zma_A 28 KKETATFFIGRKTCPYCRKFAGTLSGVVAETK----AHIYFINSEEPSQ------------------LNDLQAFRSRYGI 85 (118)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHC----CCCEEEETTCGGG------------------HHHHHHHHHHHTC
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHhcC----CeEEEEECCCcCc------------------HHHHHHHHHHcCC
Confidence 478 9999999999999999999999999875 3466777764321 1122468899999
Q ss_pred CCccEEEEECCCCcEEE
Q 008336 116 MGIPHLVILDENGKVLS 132 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~ 132 (569)
.++|+++++ ++|+++.
T Consensus 86 ~~~Pt~~~~-~~G~~~~ 101 (118)
T 1zma_A 86 PTVPGFVHI-TDGQINV 101 (118)
T ss_dssp CSSCEEEEE-ETTEEEE
T ss_pred CCCCeEEEE-ECCEEEE
Confidence 999999999 5888764
No 397
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.80 E-value=2.2e-12 Score=111.16 Aligned_cols=79 Identities=27% Similarity=0.465 Sum_probs=65.3
Q ss_pred CceeecCCCCCc-EEEEEecCCCHhhHhhHHHH---HHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCc
Q 008336 28 GDQVKLDSLKGK-IGLYFSASWCGPCQRFTPIL---AEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDS 103 (569)
Q Consensus 28 g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l---~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~ 103 (569)
.+.++++..+|| +||+|||+||++|+.+.|.+ .++.+.+.. ++.++.|+++.+..
T Consensus 9 ~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~------------------- 67 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA--RFVVASVSVDTPEG------------------- 67 (130)
Confidence 667888888999 99999999999999999999 888877653 47788887753321
Q ss_pred hhHHHHHHhcCCCCccEEEEECC-CCcE
Q 008336 104 ETRDKLDELFKVMGIPHLVILDE-NGKV 130 (569)
Q Consensus 104 ~~~~~l~~~~~v~~~P~~~lid~-~G~i 130 (569)
..+++.|+|.++|+++++|+ +|++
T Consensus 68 ---~~~~~~~~v~~~Pt~~~~d~~~G~~ 92 (130)
T 2lst_A 68 ---QELARRYRVPGTPTFVFLVPKAGAW 92 (130)
Confidence 35889999999999999995 5877
No 398
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.17 E-value=6.5e-11 Score=98.95 Aligned_cols=72 Identities=31% Similarity=0.612 Sum_probs=62.2
Q ss_pred CCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHh
Q 008336 34 DSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDEL 112 (569)
Q Consensus 34 ~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 112 (569)
+...|+ ++|+||++||++|+.+.|.+.++++++. ++.++.|+++... .+++.
T Consensus 22 ~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~v~~~~v~~~~~~------------------------~~~~~ 74 (113)
T 1ti3_A 22 GKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP---NVTFLKVDVDELK------------------------AVAEE 74 (113)
T ss_dssp HTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS---SEEEEEEETTTCH------------------------HHHHH
T ss_pred hhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC---CcEEEEEEccccH------------------------HHHHh
Confidence 344688 9999999999999999999999999875 4999999998663 48889
Q ss_pred cCCCCccEEEEECCCCcEEEc
Q 008336 113 FKVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 113 ~~v~~~P~~~lid~~G~i~~~ 133 (569)
|++.++|+++++ ++|+++.+
T Consensus 75 ~~v~~~Pt~~~~-~~G~~~~~ 94 (113)
T 1ti3_A 75 WNVEAMPTFIFL-KDGKLVDK 94 (113)
T ss_dssp HHCSSTTEEEEE-ETTEEEEE
T ss_pred CCCCcccEEEEE-eCCEEEEE
Confidence 999999999998 68988753
No 399
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.17 E-value=6.2e-11 Score=97.11 Aligned_cols=74 Identities=9% Similarity=0.192 Sum_probs=63.2
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008336 357 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 436 (569)
Q Consensus 357 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 436 (569)
+++++|+|+|+|||+|+.+.|.++++++. . ++.++.|.+|..++ ...+++..|+|+
T Consensus 24 ~~~vvi~khatwCgpc~~~~~~~e~~~~~--~---~v~~~~vdVde~r~-------------------~Sn~IA~~~~V~ 79 (112)
T 3iv4_A 24 NKYVFVLKHSETCPISANAYDQFNKFLYE--R---DMDGYYLIVQQERD-------------------LSDYIAKKTNVK 79 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHH--H---TCCEEEEEGGGGHH-------------------HHHHHHHHHTCC
T ss_pred CCCEEEEEECCcCHhHHHHHHHHHHHhcc--C---CceEEEEEeecCch-------------------hhHHHHHHhCCc
Confidence 68999999999999999999999998874 3 48899999886642 234689999999
Q ss_pred C-ccEEEEECCCCcEEEccc
Q 008336 437 G-IPMLVAIGPSGRTITKEA 455 (569)
Q Consensus 437 ~-~Pt~~lid~~G~i~~~~~ 455 (569)
+ .|+++++ ++|+++++..
T Consensus 80 h~sPq~il~-k~G~~v~~~S 98 (112)
T 3iv4_A 80 HESPQAFYF-VNGEMVWNRD 98 (112)
T ss_dssp CCSSEEEEE-ETTEEEEEEE
T ss_pred cCCCeEEEE-ECCEEEEEee
Confidence 5 9999999 8999999853
No 400
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.17 E-value=2.9e-12 Score=110.27 Aligned_cols=71 Identities=28% Similarity=0.590 Sum_probs=61.1
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
.+++++|+||++||++|+.+.|.|.+++++++ ++.++.|++|... .+++.|+|
T Consensus 35 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~v~~~~v~~~~~~-----------------------~~~~~~~v 87 (130)
T 1wmj_A 35 AGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP----GAVFLKVDVDELK-----------------------EVAEKYNV 87 (130)
T ss_dssp TTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT----TBCCEECCTTTSG-----------------------GGHHHHTC
T ss_pred cCCEEEEEEECCCChhHHHHHHHHHHHHHHCC----CCEEEEEeccchH-----------------------HHHHHcCC
Confidence 48999999999999999999999999998875 3778888777554 47889999
Q ss_pred CCccEEEEECCCCcEEEcc
Q 008336 436 SGIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~ 454 (569)
.++||++++ ++|+++.+.
T Consensus 88 ~~~Pt~~~~-~~g~~~~~~ 105 (130)
T 1wmj_A 88 EAMPTFLFI-KDGAEADKV 105 (130)
T ss_dssp CSSCCCCBC-TTTTCCBCC
T ss_pred CccceEEEE-eCCeEEEEE
Confidence 999999888 899987763
No 401
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.16 E-value=2.9e-11 Score=102.82 Aligned_cols=70 Identities=23% Similarity=0.570 Sum_probs=61.2
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
.++ ++|+||++||++|+.+.|.|.++++.+... ++.++.|+++... .+++.|++
T Consensus 32 ~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~-~v~~~~vd~d~~~------------------------~~~~~~~v 86 (121)
T 2j23_A 32 GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGD-KVGFYKVDVDEQS------------------------QIAQEVGI 86 (121)
T ss_dssp SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHH-HSEEEEEETTTCH------------------------HHHHHHTC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCC-cEEEEEEECcCCH------------------------HHHHHcCC
Confidence 578 999999999999999999999999888754 3899999998763 48899999
Q ss_pred CCccEEEEECCCCcEEE
Q 008336 116 MGIPHLVILDENGKVLS 132 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~ 132 (569)
.++|+++++ ++|+++.
T Consensus 87 ~~~Pt~~~~-~~G~~~~ 102 (121)
T 2j23_A 87 RAMPTFVFF-KNGQKID 102 (121)
T ss_dssp CSSSEEEEE-ETTEEEE
T ss_pred CcccEEEEE-ECCeEEe
Confidence 999999998 5888765
No 402
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.16 E-value=1e-10 Score=98.62 Aligned_cols=68 Identities=29% Similarity=0.664 Sum_probs=60.1
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
.++ ++|+||++||++|+.+.|.|.+++++++ ++.++.|+++... .+++.|++
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~------------------------~~~~~~~v 79 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP---GAIFLKVDVDELK------------------------DVAEAYNV 79 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSH------------------------HHHHHTTC
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC---CcEEEEEEcccCH------------------------HHHHHcCC
Confidence 478 9999999999999999999999999885 4889999998653 48899999
Q ss_pred CCccEEEEECCCCcEEE
Q 008336 116 MGIPHLVILDENGKVLS 132 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~ 132 (569)
.++|+++++ ++|+++.
T Consensus 80 ~~~Pt~~~~-~~g~~~~ 95 (118)
T 2vm1_A 80 EAMPTFLFI-KDGEKVD 95 (118)
T ss_dssp CSBSEEEEE-ETTEEEE
T ss_pred CcCcEEEEE-eCCeEEE
Confidence 999999888 7898775
No 403
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.16 E-value=1.9e-11 Score=106.07 Aligned_cols=75 Identities=17% Similarity=0.209 Sum_probs=58.2
Q ss_pred cEEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCCCCc
Q 008336 39 KIGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGI 118 (569)
Q Consensus 39 kvlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~ 118 (569)
.++|+|||+||++|+.+.|.|.+++++++ +.++.|+++..... . ..+....+++.|+|.++
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~----v~~~~vd~~~~~~~--~-------------~~d~~~~l~~~~~v~~~ 93 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEVD----VPIVMFIWGSLIGE--R-------------ELSAARLEMNKAGVEGT 93 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTCC----SCEEEEEECTTCCH--H-------------HHHHHHHHHHHHTCCSS
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHCC----CEEEEEECCCchhh--h-------------hhhhhHHHHHHcCCcee
Confidence 48999999999999999999999998874 67888888543211 0 01122468899999999
Q ss_pred cEEEEECCCCcEEEc
Q 008336 119 PHLVILDENGKVLSD 133 (569)
Q Consensus 119 P~~~lid~~G~i~~~ 133 (569)
||+++++ +|+++.+
T Consensus 94 Pt~~~~~-~G~~v~~ 107 (135)
T 3emx_A 94 PTLVFYK-EGRIVDK 107 (135)
T ss_dssp SEEEEEE-TTEEEEE
T ss_pred CeEEEEc-CCEEEEE
Confidence 9988886 8988763
No 404
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.15 E-value=8.5e-11 Score=105.68 Aligned_cols=88 Identities=18% Similarity=0.172 Sum_probs=65.1
Q ss_pred CceeecCCCCCc-EEEEEecCCCHhhHhhHHH---HHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCc
Q 008336 28 GDQVKLDSLKGK-IGLYFSASWCGPCQRFTPI---LAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDS 103 (569)
Q Consensus 28 g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~---l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~ 103 (569)
.+.+..+..+|| |||+|||+||++|+.+.|+ ..++++.+.+ ++.++.|+.+..++....|..
T Consensus 29 ~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~--~fv~ikVD~de~~~l~~~y~~------------ 94 (173)
T 3ira_A 29 EEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE--AFVSIKVDREERPDIDNIYMT------------ 94 (173)
T ss_dssp HHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH--HCEEEEEETTTCHHHHHHHHH------------
T ss_pred HHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHh--cCceeeeCCcccCcHHHHHHH------------
Confidence 345566666799 9999999999999999883 2455565543 378888888877664444421
Q ss_pred hhHHHHHHhcCCCCccEEEEECCCCcEEEc
Q 008336 104 ETRDKLDELFKVMGIPHLVILDENGKVLSD 133 (569)
Q Consensus 104 ~~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 133 (569)
.+...+++.++|++++++++|+++..
T Consensus 95 ----~~q~~~gv~g~Pt~v~l~~dG~~v~~ 120 (173)
T 3ira_A 95 ----VCQIILGRGGWPLNIIMTPGKKPFFA 120 (173)
T ss_dssp ----HHHHHHSCCCSSEEEEECTTSCEEEE
T ss_pred ----HHHHHcCCCCCcceeeECCCCCceee
Confidence 12233699999999999999999875
No 405
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.15 E-value=4.5e-12 Score=104.95 Aligned_cols=73 Identities=19% Similarity=0.315 Sum_probs=52.4
Q ss_pred ceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHH
Q 008336 349 KVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKAS 428 (569)
Q Consensus 349 ~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 428 (569)
.+++++..+|+++|+|||+||++|+.+.|.|.++++++ ..|-+..|... +...+
T Consensus 4 ~~~la~~~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~-------~~v~~~~~~~~-------------------~~~~~ 57 (106)
T 3kp8_A 4 AVGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQV-------PYVECSPNGPG-------------------TPQAQ 57 (106)
T ss_dssp HHHHHHHHHHHTCEEEECTTCHHHHHHHHHHGGGGGGS-------CEEESCTTCTT-------------------SCCCH
T ss_pred hhHHHHhcCCCEEEEEECCCCHHHHHHHHHHHHHHHhC-------CEEEEeccccc-------------------chhHH
Confidence 34556666888999999999999999999998877544 22333322110 01246
Q ss_pred HHHhcCCCCccEEEEECCCCcE
Q 008336 429 LSRKFKVSGIPMLVAIGPSGRT 450 (569)
Q Consensus 429 l~~~~~v~~~Pt~~lid~~G~i 450 (569)
+++.|+|+++||+++ +|+.
T Consensus 58 l~~~~~V~~~PT~~i---~G~~ 76 (106)
T 3kp8_A 58 ECTEAGITSYPTWII---NGRT 76 (106)
T ss_dssp HHHHTTCCSSSEEEE---TTEE
T ss_pred HHHHcCCeEeCEEEE---CCEE
Confidence 899999999999777 7764
No 406
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.14 E-value=1.2e-10 Score=115.21 Aligned_cols=70 Identities=26% Similarity=0.525 Sum_probs=60.2
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008336 357 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 436 (569)
Q Consensus 357 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 436 (569)
++++||+|||+||++|+.+.|.|.++++++++. +.|+.|++|.+. ...+++.|+|.
T Consensus 35 ~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~---~~~~~v~~d~~~---------------------~~~l~~~~~I~ 90 (298)
T 3ed3_A 35 NYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGV---VQVAAVNCDLNK---------------------NKALCAKYDVN 90 (298)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---SEEEEEETTSTT---------------------THHHHHHTTCC
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHccCC---cEEEEEEccCcc---------------------CHHHHHhCCCC
Confidence 789999999999999999999999999999764 899999998543 24689999999
Q ss_pred CccEEEEECCCCcEE
Q 008336 437 GIPMLVAIGPSGRTI 451 (569)
Q Consensus 437 ~~Pt~~lid~~G~i~ 451 (569)
++||+++++. |+++
T Consensus 91 ~~Pt~~~~~~-g~~v 104 (298)
T 3ed3_A 91 GFPTLMVFRP-PKID 104 (298)
T ss_dssp BSSEEEEEEC-CCC-
T ss_pred ccceEEEEEC-Ccee
Confidence 9999999964 5543
No 407
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.14 E-value=1.8e-10 Score=103.52 Aligned_cols=90 Identities=22% Similarity=0.283 Sum_probs=67.2
Q ss_pred cccCccCCceecCCCceeec--CCCCCc-EEEEEec-------CCCHhhHhhHHHHHHHHHHhcCC---CCEEEEEEeCC
Q 008336 14 LLSSSARDFLIRSNGDQVKL--DSLKGK-IGLYFSA-------SWCGPCQRFTPILAEVYNELSRQ---GDFEVIFVSGD 80 (569)
Q Consensus 14 ~~g~~~pdf~~~~~g~~v~l--~~~~gk-vlv~F~a-------~wC~~C~~~~p~l~~~~~~~~~~---g~~~vv~v~~d 80 (569)
++....++-++.++...+.. ..-++. |||+||| +||++|+.+.|.|.++++++... +++.++.|++|
T Consensus 11 l~~l~~~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d 90 (178)
T 3ga4_A 11 ILQLKDDTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVN 90 (178)
T ss_dssp HHTTCCTTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETT
T ss_pred HHHhhccCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECc
Confidence 33333345555555544432 222455 9999999 49999999999999999998621 46999999999
Q ss_pred CCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCCCCccEEEEECCC
Q 008336 81 EDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILDEN 127 (569)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~ 127 (569)
.++ .++..|+|+++||++++.+.
T Consensus 91 ~~~------------------------~la~~~~I~siPtl~~F~~g 113 (178)
T 3ga4_A 91 EVP------------------------QLVKDLKLQNVPHLVVYPPA 113 (178)
T ss_dssp TCH------------------------HHHHHTTCCSSCEEEEECCC
T ss_pred cCH------------------------HHHHHcCCCCCCEEEEEcCC
Confidence 875 48999999999999999443
No 408
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=98.75 E-value=4.3e-12 Score=104.64 Aligned_cols=71 Identities=25% Similarity=0.595 Sum_probs=61.1
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008336 357 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 436 (569)
Q Consensus 357 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 436 (569)
+++++|+||++||++|+.+.|.+++++++++++ +.++.|++|.+. .+++.|++.
T Consensus 19 ~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~-----------------------~~~~~~~v~ 72 (106)
T 2yj7_A 19 DKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGK---VKVVKVNVDENP-----------------------NTAAQYGIR 72 (106)
Confidence 789999999999999999999999999988653 777777776543 478899999
Q ss_pred CccEEEEECCCCcEEEcc
Q 008336 437 GIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 437 ~~Pt~~lid~~G~i~~~~ 454 (569)
++|+++++ ++|+++.+.
T Consensus 73 ~~Pt~~~~-~~g~~~~~~ 89 (106)
T 2yj7_A 73 SIPTLLLF-KNGQVVDRL 89 (106)
Confidence 99999999 899987763
No 409
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.13 E-value=5.1e-12 Score=104.63 Aligned_cols=73 Identities=18% Similarity=0.388 Sum_probs=53.3
Q ss_pred ceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHH
Q 008336 29 DQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRD 107 (569)
Q Consensus 29 ~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (569)
+.+++++..|+ ++|+|||+|||+|+++.|.|.++++++. .|+++.+.. .+...
T Consensus 3 ~~~~la~~~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~--------~v~~~~~~~------------------~~~~~ 56 (106)
T 3kp8_A 3 LAVGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQVP--------YVECSPNGP------------------GTPQA 56 (106)
T ss_dssp HHHHHHHHHHHHTCEEEECTTCHHHHHHHHHHGGGGGGSC--------EEESCTTCT------------------TSCCC
T ss_pred HhhHHHHhcCCCEEEEEECCCCHHHHHHHHHHHHHHHhCC--------EEEEecccc------------------cchhH
Confidence 45667777889 9999999999999999999999986653 334441100 00113
Q ss_pred HHHHhcCCCCccEEEEECCCCcE
Q 008336 108 KLDELFKVMGIPHLVILDENGKV 130 (569)
Q Consensus 108 ~l~~~~~v~~~P~~~lid~~G~i 130 (569)
.+++.|+|+++||+++ +|+.
T Consensus 57 ~l~~~~~V~~~PT~~i---~G~~ 76 (106)
T 3kp8_A 57 QECTEAGITSYPTWII---NGRT 76 (106)
T ss_dssp HHHHHTTCCSSSEEEE---TTEE
T ss_pred HHHHHcCCeEeCEEEE---CCEE
Confidence 6899999999999766 6764
No 410
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.13 E-value=1.8e-10 Score=99.90 Aligned_cols=88 Identities=14% Similarity=0.166 Sum_probs=65.3
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
+|+ ++|+|||+||++|+.+.|.|.++++++. ++.++.|+++.. .+.|+|
T Consensus 29 ~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~---~v~~~~vd~~~~---------------------------~~~~~i 78 (135)
T 2dbc_A 29 KDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP---ETKFVKAIVNSC---------------------------IEHYHD 78 (135)
T ss_dssp SSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS---SEEEEEECCSSS---------------------------CSSCCS
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC---CcEEEEEEhhcC---------------------------cccCCC
Confidence 468 9999999999999999999999999874 488888888753 157999
Q ss_pred CCccEEEEECCCCcEEEcC-CcceeecccCCCCCccHHHHHHHHHH
Q 008336 116 MGIPHLVILDENGKVLSDG-GVEIIREYGVEGYPFTVERIKEMKEQ 160 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~ 160 (569)
.++||+++++ +|+++.+. |.. .++. ..++.+.++.+++.
T Consensus 79 ~~~Pt~~~~~-~G~~v~~~~G~~---~~~~--~~~~~~~l~~~l~~ 118 (135)
T 2dbc_A 79 NCLPTIFVYK-NGQIEGKFIGII---ECGG--INLKLEELEWKLSE 118 (135)
T ss_dssp SCCSEEEEES-SSSCSEEEESTT---TTTC--TTCCHHHHHHHHHH
T ss_pred CCCCEEEEEE-CCEEEEEEEeEE---eeCC--CcCCHHHHHHHHHH
Confidence 9999999995 88776531 111 1111 13466777776654
No 411
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.12 E-value=2e-10 Score=103.19 Aligned_cols=70 Identities=19% Similarity=0.322 Sum_probs=58.4
Q ss_pred CCCEEEEEEec-------CCChhHHhhhHHHHHHHHHHhhcC--CCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhh
Q 008336 356 AGKTILLYFSA-------HWCPPCRAFLPKLIDAYKKIKERN--ESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARK 426 (569)
Q Consensus 356 ~gk~vll~F~a-------~wC~~C~~~~~~l~~l~~~~~~~~--~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~ 426 (569)
++.+|||+||| +||++|+.+.|.|+++++++.... +++.++.|++|.++
T Consensus 36 ~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~---------------------- 93 (178)
T 3ga4_A 36 PGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVP---------------------- 93 (178)
T ss_dssp TTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCH----------------------
T ss_pred CCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCH----------------------
Confidence 45689999999 499999999999999999997221 24888888888765
Q ss_pred HHHHHhcCCCCccEEEEECCCC
Q 008336 427 ASLSRKFKVSGIPMLVAIGPSG 448 (569)
Q Consensus 427 ~~l~~~~~v~~~Pt~~lid~~G 448 (569)
++++.|+|+++||++++.+.+
T Consensus 94 -~la~~~~I~siPtl~~F~~g~ 114 (178)
T 3ga4_A 94 -QLVKDLKLQNVPHLVVYPPAE 114 (178)
T ss_dssp -HHHHHTTCCSSCEEEEECCCC
T ss_pred -HHHHHcCCCCCCEEEEEcCCC
Confidence 589999999999999995443
No 412
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.12 E-value=2.7e-11 Score=102.29 Aligned_cols=69 Identities=28% Similarity=0.601 Sum_probs=58.7
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCC-CEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQG-DFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFK 114 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g-~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 114 (569)
+++ ++|+||++||++|+.+.|.+.++++.++..+ ++.++.|+++.+. .+++.|+
T Consensus 23 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~------------------------~~~~~~~ 78 (120)
T 1mek_A 23 AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEES------------------------DLAQQYG 78 (120)
T ss_dssp HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCC------------------------SSHHHHT
T ss_pred cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCH------------------------HHHHHCC
Confidence 578 9999999999999999999999999987653 5788888887542 4788899
Q ss_pred CCCccEEEEECCCCcE
Q 008336 115 VMGIPHLVILDENGKV 130 (569)
Q Consensus 115 v~~~P~~~lid~~G~i 130 (569)
+.++|+++++ ++|++
T Consensus 79 v~~~Pt~~~~-~~g~~ 93 (120)
T 1mek_A 79 VRGYPTIKFF-RNGDT 93 (120)
T ss_dssp CCSSSEEEEE-ESSCS
T ss_pred CCcccEEEEE-eCCCc
Confidence 9999999999 67764
No 413
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.11 E-value=2.5e-11 Score=103.51 Aligned_cols=81 Identities=30% Similarity=0.566 Sum_probs=60.5
Q ss_pred cCCCceeecC-CCCCc-EEEEEecCCCH--------------hhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHH
Q 008336 25 RSNGDQVKLD-SLKGK-IGLYFSASWCG--------------PCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKG 88 (569)
Q Consensus 25 ~~~g~~v~l~-~~~gk-vlv~F~a~wC~--------------~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~ 88 (569)
.++++.+... .-.|| ++|+|||+||+ +|+.+.|.+.++++++++ ++.++.|++|.+.
T Consensus 7 ~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~--~~~~~~vd~d~~~----- 79 (123)
T 1oaz_A 7 HLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNP----- 79 (123)
T ss_dssp ECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC---------CEEEEEETTSCT-----
T ss_pred ecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC--CeEEEEEECCCCH-----
Confidence 3444444322 22578 99999999999 999999999999998864 4899999998653
Q ss_pred HHHhCCCcccccCCchhHHHHHHhcCCCCccEEEEECCCCcEEE
Q 008336 89 YFSKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i~~ 132 (569)
.+++.|+|.++|+++++ ++|+++.
T Consensus 80 -------------------~l~~~~~v~~~Pt~~~~-~~G~~~~ 103 (123)
T 1oaz_A 80 -------------------GTAPKYGIRGIPTLLLF-KNGEVAA 103 (123)
T ss_dssp -------------------TTGGGGTCCBSSEEEEE-ESSSEEE
T ss_pred -------------------HHHHHcCCCccCEEEEE-ECCEEEE
Confidence 47889999999999999 8998875
No 414
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.11 E-value=3.6e-10 Score=115.42 Aligned_cols=178 Identities=11% Similarity=0.141 Sum_probs=111.4
Q ss_pred eecCCCceeeeccccCcEEEEEEecCCcccchh---hh---HHHHHHHHHHhcCCCceEEEEeeccccHHHHHHHhcCCC
Q 008336 182 VISSDGRKISVSDLEGKTIGLYFSMSSYKASAE---FT---PRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMP 255 (569)
Q Consensus 182 ~~~~~~~~~~~~~~~gk~v~l~f~~~~~~~c~~---~~---~~~~~~~~~~~~~~~~~ei~~v~~d~~~~~~~~~~~~~~ 255 (569)
++..+.+++.....+++.+++.|+++||++|.. +. |.+.+++..+++. . +.++.+|.++
T Consensus 15 v~~lt~~~f~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~--~--v~~~~Vd~~~----------- 79 (367)
T 3us3_A 15 VINVNAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDK--G--VGFGLVDSEK----------- 79 (367)
T ss_dssp CEECCTTTHHHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTT--T--EEEEEEETTT-----------
T ss_pred cEECCHHHHHHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcC--C--ceEEEEeCcc-----------
Confidence 444444444432245689999999999999632 22 5788888888643 2 5566666554
Q ss_pred cccccCCchhHHHHHhhcccCCCceEEEECCCCCchhhhhHHHHHhhCCCCCCCChHHHHHHHHHHHHHHhhhhhhhhhc
Q 008336 256 WLALPFKDKSREKLARYFELSTLPTLVIIGPDGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLV 335 (569)
Q Consensus 256 ~~~~~~~d~~~~~l~~~f~v~~~Ptlvi~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 335 (569)
.+.+++.|+|+++||++++. +|+... +.| +.+.+.+.+++..... +...
T Consensus 80 ----------~~~l~~~~~V~~~PTl~~f~-~G~~~~--------y~G----~~~~~~i~~~i~~~~~----~~v~---- 128 (367)
T 3us3_A 80 ----------DAAVAKKLGLTEEDSIYVFK-EDEVIE--------YDG----EFSADTLVEFLLDVLE----DPVE---- 128 (367)
T ss_dssp ----------THHHHHHHTCCSTTEEEEEE-TTEEEE--------CCS----CCSHHHHHHHHHHHHS----CSEE----
T ss_pred ----------cHHHHHHcCCCcCceEEEEE-CCcEEE--------eCC----CCCHHHHHHHHHHhcC----CCcE----
Confidence 56899999999999999997 454321 112 4577787777764321 1100
Q ss_pred cCCccceec-C-CCCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhc
Q 008336 336 SGDLDFVVG-K-NGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKG 413 (569)
Q Consensus 336 ~~~~~f~~~-~-~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~ 413 (569)
.+. . +-+.+ +. ...++++|.|+++||. ...+.+.+++..+++. +.+..++ +.
T Consensus 129 ------~i~~~~~~~~~-~~-~~~~~~vv~ff~~~~~---~~~~~f~~~A~~~~~~---~~F~~~~---~~--------- 182 (367)
T 3us3_A 129 ------LIEGERELQAF-EN-IEDEIKLIGYFKNKDS---EHYKAFKEAAEEFHPY---IPFFATF---DS--------- 182 (367)
T ss_dssp ------ECCSHHHHHHH-HH-CCSSCEEEEECSCTTC---HHHHHHHHHHHHHTTT---SCEEEEC---CH---------
T ss_pred ------EcCCHHHHHHH-hc-cCCCcEEEEEECCCCc---hHHHHHHHHHHhhcCC---cEEEEEC---CH---------
Confidence 010 0 00011 11 0146788999999876 4566788888888754 5554442 22
Q ss_pred CCCcccccCchhhHHHHHhcCCCCccEEEEECC
Q 008336 414 MPWLALPFGDARKASLSRKFKVSGIPMLVAIGP 446 (569)
Q Consensus 414 ~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~lid~ 446 (569)
.+++.|+++. |+++++.+
T Consensus 183 --------------~~~~~~~v~~-p~i~lf~~ 200 (367)
T 3us3_A 183 --------------KVAKKLTLKL-NEIDFYEA 200 (367)
T ss_dssp --------------HHHHHHTCCT-TCEEEECT
T ss_pred --------------HHHHHcCCCC-CeEEEEcC
Confidence 4788899985 99999965
No 415
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.11 E-value=6e-11 Score=113.07 Aligned_cols=71 Identities=15% Similarity=0.189 Sum_probs=60.2
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
++++|||+||++||++|+.+.|.|.+++++++ ++.++.|+++. . .++..|+|
T Consensus 132 ~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~----~v~f~kVd~d~-~-----------------------~l~~~~~I 183 (245)
T 1a0r_P 132 KITTIVVHIYEDGIKGCDALNSSLICLAAEYP----MVKFCKIKASN-T-----------------------GAGDRFSS 183 (245)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT----TSEEEEEEHHH-H-----------------------CCTTSSCT
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC----CCEEEEEeCCc-H-----------------------HHHHHCCC
Confidence 48999999999999999999999999999885 37888887653 1 25778999
Q ss_pred CCccEEEEECCCCcEEEccc
Q 008336 436 SGIPMLVAIGPSGRTITKEA 455 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~~ 455 (569)
.++||++++ ++|+++.+..
T Consensus 184 ~~~PTll~~-~~G~~v~~~v 202 (245)
T 1a0r_P 184 DVLPTLLVY-KGGELLSNFI 202 (245)
T ss_dssp TTCSEEEEE-ETTEEEEEET
T ss_pred CCCCEEEEE-ECCEEEEEEe
Confidence 999999999 5999988743
No 416
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.10 E-value=1.9e-11 Score=101.71 Aligned_cols=75 Identities=16% Similarity=0.179 Sum_probs=55.9
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008336 357 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 436 (569)
Q Consensus 357 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 436 (569)
...+||+|||+||++|+.+.+.+...++.... ...+.|+.|+++.+.. ..++..|+|.
T Consensus 18 ~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~-~~~~~l~~vdv~~~~~---------------------~~la~~~~V~ 75 (116)
T 3dml_A 18 AELRLLMFEQPGCLYCARWDAEIAPQYPLTDE-GRAAPVQRLQMRDPLP---------------------PGLELARPVT 75 (116)
T ss_dssp -CEEEEEEECTTCHHHHHHHHHTTTTGGGSHH-HHHSCEEEEETTSCCC---------------------TTCBCSSCCC
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHhhHHHhhh-cccceEEEEECCCCCc---------------------hhHHHHCCCC
Confidence 46899999999999999998766544332110 0126788888886531 2467789999
Q ss_pred CccEEEEECCCCcEEEcc
Q 008336 437 GIPMLVAIGPSGRTITKE 454 (569)
Q Consensus 437 ~~Pt~~lid~~G~i~~~~ 454 (569)
++||+++++ +|+.+.+-
T Consensus 76 g~PT~i~f~-~G~ev~Ri 92 (116)
T 3dml_A 76 FTPTFVLMA-GDVESGRL 92 (116)
T ss_dssp SSSEEEEEE-TTEEEEEE
T ss_pred CCCEEEEEE-CCEEEeee
Confidence 999999997 99999983
No 417
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.10 E-value=1.4e-10 Score=117.87 Aligned_cols=165 Identities=16% Similarity=0.221 Sum_probs=106.3
Q ss_pred ccCcEEEEEEecCCcccchhhhHH-------HHHHHHHHhcCCCceEEEEeeccccHHHHHHHhcCCCcccccCCchhHH
Q 008336 195 LEGKTIGLYFSMSSYKASAEFTPR-------LVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSRE 267 (569)
Q Consensus 195 ~~gk~v~l~f~~~~~~~c~~~~~~-------~~~~~~~~~~~~~~~ei~~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~ 267 (569)
.+++.+++.|+++||+ |+.+.|. +.++++.+++. . +.++.+|.+. ..
T Consensus 26 ~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~--~--v~~~~Vd~~~---------------------~~ 79 (350)
T 1sji_A 26 KKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHK--D--IGFVMVDAKK---------------------EA 79 (350)
T ss_dssp TTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGS--S--EEEEEEETTT---------------------TH
T ss_pred hhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhc--C--cEEEEEeCCC---------------------CH
Confidence 3568999999999999 9999998 88888888654 2 5555555543 45
Q ss_pred HHHhhcccCCCceEEEECCCCCchhhhhHHHHHhhCCCCCCCChHHHHHHHHHHHHHHhhhhhhhhhccCCccceecCCC
Q 008336 268 KLARYFELSTLPTLVIIGPDGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGDLDFVVGKNG 347 (569)
Q Consensus 268 ~l~~~f~v~~~Ptlvi~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~f~~~~~g 347 (569)
.+++.|+|.++||++++. +|+.. ...| +.+.+.+.++...... +... .++ +.
T Consensus 80 ~l~~~~~v~~~Pt~~~~~-~g~~~--------~~~G----~~~~~~l~~~i~~~~~----~~~~----------~l~-~~ 131 (350)
T 1sji_A 80 KLAKKLGFDEEGSLYVLK-GDRTI--------EFDG----EFAADVLVEFLLDLIE----DPVE----------IIN-SK 131 (350)
T ss_dssp HHHHHHTCCSTTEEEEEE-TTEEE--------EECS----CCCHHHHHHHHHTTSS----CSEE----------ECC-SH
T ss_pred HHHHhcCCCccceEEEEE-CCcEE--------EecC----CCCHHHHHHHHHHhcC----Ccce----------ecc-ch
Confidence 789999999999999994 45422 1112 3466666665542111 0000 010 00
Q ss_pred Ccee-cccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhh
Q 008336 348 GKVP-VSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARK 426 (569)
Q Consensus 348 ~~v~-l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~ 426 (569)
+.+. +-....+.++|.|+++||.+ ..+.+.++++.++++ +.+..++ ++
T Consensus 132 ~~~~~~~~~~~~~~vv~ff~~~~~~---~~~~~~~~A~~~~~~---~~f~~~~---~~---------------------- 180 (350)
T 1sji_A 132 LEVQAFERIEDQIKLIGFFKSEESE---YYKAFEEAAEHFQPY---IKFFATF---DK---------------------- 180 (350)
T ss_dssp HHHHHHHHCCSSCEEEEECSCTTSH---HHHHHHHHHHHTTTT---SEEEEEC---CH----------------------
T ss_pred HHHHHHhccCCCcEEEEEECCCCcH---HHHHHHHHHHhhccC---cEEEEEC---CH----------------------
Confidence 0000 00012456788899998754 457788888888654 6655542 22
Q ss_pred HHHHHhcCCCCccEEEEECC
Q 008336 427 ASLSRKFKVSGIPMLVAIGP 446 (569)
Q Consensus 427 ~~l~~~~~v~~~Pt~~lid~ 446 (569)
++++.|++. .|+++++.+
T Consensus 181 -~~~~~~~v~-~p~i~~~~~ 198 (350)
T 1sji_A 181 -GVAKKLSLK-MNEVDFYEP 198 (350)
T ss_dssp -HHHHHHTCC-TTCEEEECT
T ss_pred -HHHHHcCCC-CCcEEEEeC
Confidence 478899999 999999976
No 418
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.10 E-value=1.1e-10 Score=92.04 Aligned_cols=62 Identities=21% Similarity=0.292 Sum_probs=54.2
Q ss_pred EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCCCCcc
Q 008336 40 IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIP 119 (569)
Q Consensus 40 vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P 119 (569)
+++.||++||++|+.+.|.+.++++++++ ++.++.|+++.+. .+++.|++.++|
T Consensus 4 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~~~~------------------------~~~~~~~v~~~P 57 (85)
T 1nho_A 4 NIEVFTSPTCPYCPMAIEVVDEAKKEFGD--KIDVEKIDIMVDR------------------------EKAIEYGLMAVP 57 (85)
T ss_dssp CEEEESCSSSCCSTTHHHHHHHHHHHHCS--SCCEEEECTTTCG------------------------GGGGGTCSSCSS
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHhcC--CeEEEEEECCCCH------------------------HHHHhCCceeeC
Confidence 57899999999999999999999999874 4889999988653 477899999999
Q ss_pred EEEEECCCCcE
Q 008336 120 HLVILDENGKV 130 (569)
Q Consensus 120 ~~~lid~~G~i 130 (569)
++++ +|++
T Consensus 58 t~~~---~G~~ 65 (85)
T 1nho_A 58 AIAI---NGVV 65 (85)
T ss_dssp EEEE---TTTE
T ss_pred EEEE---CCEE
Confidence 9988 7876
No 419
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.09 E-value=1.4e-10 Score=91.41 Aligned_cols=62 Identities=27% Similarity=0.480 Sum_probs=54.3
Q ss_pred EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCCCCcc
Q 008336 40 IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIP 119 (569)
Q Consensus 40 vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P 119 (569)
+++.||++||++|+.+.|.|.++++++++ ++.++.|+++.+. .+++.|++.++|
T Consensus 5 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~~~~------------------------~~~~~~~v~~~P 58 (85)
T 1fo5_A 5 KIELFTSPMCPHCPAAKRVVEEVANEMPD--AVEVEYINVMENP------------------------QKAMEYGIMAVP 58 (85)
T ss_dssp EEEEEECCCSSCCCTHHHHHHHHHHHCSS--SEEEEEEESSSSC------------------------CTTTSTTTCCSS
T ss_pred EEEEEeCCCCCchHHHHHHHHHHHHHcCC--ceEEEEEECCCCH------------------------HHHHHCCCcccC
Confidence 78999999999999999999999999863 5999999998652 367889999999
Q ss_pred EEEEECCCCcE
Q 008336 120 HLVILDENGKV 130 (569)
Q Consensus 120 ~~~lid~~G~i 130 (569)
++++ +|++
T Consensus 59 t~~~---~G~~ 66 (85)
T 1fo5_A 59 TIVI---NGDV 66 (85)
T ss_dssp EEEE---TTEE
T ss_pred EEEE---CCEE
Confidence 9988 7876
No 420
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.08 E-value=1.6e-10 Score=98.52 Aligned_cols=77 Identities=25% Similarity=0.491 Sum_probs=59.7
Q ss_pred CCCCc-EEEEEecC-------CCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhH
Q 008336 35 SLKGK-IGLYFSAS-------WCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETR 106 (569)
Q Consensus 35 ~~~gk-vlv~F~a~-------wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (569)
+..|+ ++|+|||+ ||++|+.+.|.|.++++++++ ++.++.|+++... .| . +..
T Consensus 21 ~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~--~~~~~~vd~~~~~-~~---~-------------d~~ 81 (123)
T 1wou_A 21 QHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE--GCVFIYCQVGEKP-YW---K-------------DPN 81 (123)
T ss_dssp TTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT--TEEEEEEECCCHH-HH---H-------------CTT
T ss_pred HhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC--CcEEEEEECCCch-hh---h-------------chh
Confidence 33588 99999999 999999999999999988864 4999999996421 11 0 011
Q ss_pred HHHHHhcCCCCccEEEEECCCCcE
Q 008336 107 DKLDELFKVMGIPHLVILDENGKV 130 (569)
Q Consensus 107 ~~l~~~~~v~~~P~~~lid~~G~i 130 (569)
..+++.|+|.++||+++++..+++
T Consensus 82 ~~~~~~~~i~~~Pt~~~~~~~~~~ 105 (123)
T 1wou_A 82 NDFRKNLKVTAVPTLLKYGTPQKL 105 (123)
T ss_dssp CHHHHHHCCCSSSEEEETTSSCEE
T ss_pred HHHHHHCCCCeeCEEEEEcCCceE
Confidence 358888999999999999764433
No 421
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.07 E-value=2.7e-10 Score=117.11 Aligned_cols=73 Identities=21% Similarity=0.442 Sum_probs=62.1
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcC---CCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhc
Q 008336 357 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERN---ESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKF 433 (569)
Q Consensus 357 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~---~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~ 433 (569)
+++++|+|||+||++|+++.|.|.++++.+++.. .++.++.|+++... .+++.|
T Consensus 22 ~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~-----------------------~l~~~~ 78 (382)
T 2r2j_A 22 ADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHS-----------------------DIAQRY 78 (382)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCH-----------------------HHHHHT
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccH-----------------------HHHHhc
Confidence 7899999999999999999999999999996431 24788888877654 589999
Q ss_pred CCCCccEEEEECCCCcEEEc
Q 008336 434 KVSGIPMLVAIGPSGRTITK 453 (569)
Q Consensus 434 ~v~~~Pt~~lid~~G~i~~~ 453 (569)
+|+++||++++ ++|+++.+
T Consensus 79 ~v~~~Pt~~~f-~~G~~~~~ 97 (382)
T 2r2j_A 79 RISKYPTLKLF-RNGMMMKR 97 (382)
T ss_dssp TCCEESEEEEE-ETTEEEEE
T ss_pred CCCcCCEEEEE-eCCcEeee
Confidence 99999999999 68887753
No 422
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.04 E-value=6.6e-10 Score=85.80 Aligned_cols=61 Identities=18% Similarity=0.211 Sum_probs=51.4
Q ss_pred EEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCCCCccE
Q 008336 41 GLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPH 120 (569)
Q Consensus 41 lv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P~ 120 (569)
.|+||++||++|+.+.|.+.++++++.. ++.++.|+ + ..+++.|+|.++|+
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~~--~~~~~~v~---~------------------------~~~~~~~~v~~~Pt 53 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELGI--DAEFEKIK---E------------------------MDQILEAGLTALPG 53 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTTC--CEEEEEEC---S------------------------HHHHHHHTCSSSSC
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcCC--ceEEEEec---C------------------------HHHHHHCCCCcCCE
Confidence 5899999999999999999999998863 47777776 2 25788999999999
Q ss_pred EEEECCCCcEEEc
Q 008336 121 LVILDENGKVLSD 133 (569)
Q Consensus 121 ~~lid~~G~i~~~ 133 (569)
+++ +|+++..
T Consensus 54 ~~~---~G~~~~~ 63 (77)
T 1ilo_A 54 LAV---DGELKIM 63 (77)
T ss_dssp EEE---TTEEEEC
T ss_pred EEE---CCEEEEc
Confidence 988 7888764
No 423
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.03 E-value=7.5e-10 Score=114.49 Aligned_cols=82 Identities=15% Similarity=0.219 Sum_probs=64.6
Q ss_pred ecCCCceeec--CCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCC------CEEEEEEeCCCCHHHHHHHHHhCC
Q 008336 24 IRSNGDQVKL--DSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQG------DFEVIFVSGDEDDEAFKGYFSKMP 94 (569)
Q Consensus 24 ~~~~g~~v~l--~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g------~~~vv~v~~d~~~~~~~~~~~~~~ 94 (569)
..++.+.+.. ..-.++ +||+|||+||++|+.+.|.+.++++++.... ++.++.|+++...
T Consensus 26 ~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~----------- 94 (470)
T 3qcp_A 26 VDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEV----------- 94 (470)
T ss_dssp EECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCH-----------
T ss_pred EECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCH-----------
Confidence 3444444432 222347 9999999999999999999999999997442 4899999999764
Q ss_pred CcccccCCchhHHHHHHhcCCCCccEEEEECCCCc
Q 008336 95 WLAVPFSDSETRDKLDELFKVMGIPHLVILDENGK 129 (569)
Q Consensus 95 ~~~~~~~~~~~~~~l~~~~~v~~~P~~~lid~~G~ 129 (569)
.+++.|+|.++||+++++++|.
T Consensus 95 -------------~la~~y~V~~~PTlilf~~gg~ 116 (470)
T 3qcp_A 95 -------------DLCRKYDINFVPRLFFFYPRDS 116 (470)
T ss_dssp -------------HHHHHTTCCSSCEEEEEEESSC
T ss_pred -------------HHHHHcCCCccCeEEEEECCCc
Confidence 4899999999999999976553
No 424
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.03 E-value=1.9e-10 Score=109.51 Aligned_cols=91 Identities=14% Similarity=0.131 Sum_probs=66.6
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
+++ |||+|||+||++|+.+.|.|.++++++. ++.++.|+++. . .++..|+|
T Consensus 132 ~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~---~v~f~kVd~d~--~-----------------------~l~~~~~I 183 (245)
T 1a0r_P 132 KITTIVVHIYEDGIKGCDALNSSLICLAAEYP---MVKFCKIKASN--T-----------------------GAGDRFSS 183 (245)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT---TSEEEEEEHHH--H-----------------------CCTTSSCT
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC---CCEEEEEeCCc--H-----------------------HHHHHCCC
Confidence 478 9999999999999999999999999985 37888887753 1 25678999
Q ss_pred CCccEEEEECCCCcEEEcCCcceeecccCCCCCccHHHHHHHHHH
Q 008336 116 MGIPHLVILDENGKVLSDGGVEIIREYGVEGYPFTVERIKEMKEQ 160 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 160 (569)
.++||++++ ++|+++...... ...+ +-.++...+..++..
T Consensus 184 ~~~PTll~~-~~G~~v~~~vG~--~~~~--g~~~~~e~Le~~L~~ 223 (245)
T 1a0r_P 184 DVLPTLLVY-KGGELLSNFISV--TEQL--AEEFFTGDVESFLNE 223 (245)
T ss_dssp TTCSEEEEE-ETTEEEEEETTG--GGGS--CTTCCHHHHHHHHHT
T ss_pred CCCCEEEEE-ECCEEEEEEeCC--cccc--cccccHHHHHHHHHH
Confidence 999999998 589887642110 0111 113566677766643
No 425
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.03 E-value=5.5e-10 Score=86.27 Aligned_cols=62 Identities=15% Similarity=0.194 Sum_probs=52.1
Q ss_pred EEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCCCcc
Q 008336 360 ILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVSGIP 439 (569)
Q Consensus 360 vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~P 439 (569)
+.|.||++||++|+.+.|.|++++++++.+ +.++.|+ +. ++++.|+|+++|
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~~---~~~~~v~---~~-----------------------~~~~~~~v~~~P 52 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGID---AEFEKIK---EM-----------------------DQILEAGLTALP 52 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTCC---EEEEEEC---SH-----------------------HHHHHHTCSSSS
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCCc---eEEEEec---CH-----------------------HHHHHCCCCcCC
Confidence 468999999999999999999999888643 6777665 22 478899999999
Q ss_pred EEEEECCCCcEEEc
Q 008336 440 MLVAIGPSGRTITK 453 (569)
Q Consensus 440 t~~lid~~G~i~~~ 453 (569)
|+++ +|+++.+
T Consensus 53 t~~~---~G~~~~~ 63 (77)
T 1ilo_A 53 GLAV---DGELKIM 63 (77)
T ss_dssp CEEE---TTEEEEC
T ss_pred EEEE---CCEEEEc
Confidence 9998 8998876
No 426
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.01 E-value=7.2e-10 Score=90.78 Aligned_cols=72 Identities=13% Similarity=0.178 Sum_probs=60.9
Q ss_pred Cc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCCC
Q 008336 38 GK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVM 116 (569)
Q Consensus 38 gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 116 (569)
++ ++|+|+|+|||+|+...|.|.++++. . ++.++.|++|..++. ...++..|+|+
T Consensus 24 ~~~vvi~khatwCgpc~~~~~~~e~~~~~-~---~v~~~~vdVde~r~~--------------------Sn~IA~~~~V~ 79 (112)
T 3iv4_A 24 NKYVFVLKHSETCPISANAYDQFNKFLYE-R---DMDGYYLIVQQERDL--------------------SDYIAKKTNVK 79 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHH-H---TCCEEEEEGGGGHHH--------------------HHHHHHHHTCC
T ss_pred CCCEEEEEECCcCHhHHHHHHHHHHHhcc-C---CceEEEEEeecCchh--------------------hHHHHHHhCCc
Confidence 67 99999999999999999999999874 2 488999999976541 12589999999
Q ss_pred C-ccEEEEECCCCcEEEcC
Q 008336 117 G-IPHLVILDENGKVLSDG 134 (569)
Q Consensus 117 ~-~P~~~lid~~G~i~~~~ 134 (569)
+ .|+++++ ++|+++...
T Consensus 80 h~sPq~il~-k~G~~v~~~ 97 (112)
T 3iv4_A 80 HESPQAFYF-VNGEMVWNR 97 (112)
T ss_dssp CCSSEEEEE-ETTEEEEEE
T ss_pred cCCCeEEEE-ECCEEEEEe
Confidence 5 9999999 899998763
No 427
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.01 E-value=2.1e-10 Score=107.76 Aligned_cols=71 Identities=15% Similarity=0.184 Sum_probs=60.5
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
+|++|||+||++||++|+.+.|.|.++++++. ++.++.|+++ ++ .++..|+|
T Consensus 119 ~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~----~v~f~~vd~~-~~-----------------------~l~~~~~i 170 (217)
T 2trc_P 119 KVTTIVVNIYEDGVRGCDALNSSLECLAAEYP----MVKFCKIRAS-NT-----------------------GAGDRFSS 170 (217)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT----TSEEEEEEHH-HH-----------------------TCSTTSCG
T ss_pred CCcEEEEEEECCCCccHHHHHHHHHHHHHHCC----CeEEEEEECC-cH-----------------------HHHHHCCC
Confidence 46999999999999999999999999988874 4788888776 22 36788999
Q ss_pred CCccEEEEECCCCcEEEccc
Q 008336 436 SGIPMLVAIGPSGRTITKEA 455 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~~~ 455 (569)
.++||++++ ++|+++.+..
T Consensus 171 ~~~PTl~~~-~~G~~v~~~~ 189 (217)
T 2trc_P 171 DVLPTLLVY-KGGELISNFI 189 (217)
T ss_dssp GGCSEEEEE-ETTEEEEEET
T ss_pred CCCCEEEEE-ECCEEEEEEe
Confidence 999999999 6999987643
No 428
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.01 E-value=2e-10 Score=118.79 Aligned_cols=70 Identities=16% Similarity=0.276 Sum_probs=59.9
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCC-----CeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHH
Q 008336 357 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNE-----SLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSR 431 (569)
Q Consensus 357 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~-----~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~ 431 (569)
+|++||+|||+||++|+.+.|.|.+++++++.+.. .+.++.|++|..+ ++++
T Consensus 42 ~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~-----------------------~la~ 98 (470)
T 3qcp_A 42 LCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEV-----------------------DLCR 98 (470)
T ss_dssp GSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCH-----------------------HHHH
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCH-----------------------HHHH
Confidence 58999999999999999999999999999874321 4888999888664 5899
Q ss_pred hcCCCCccEEEEECCCCc
Q 008336 432 KFKVSGIPMLVAIGPSGR 449 (569)
Q Consensus 432 ~~~v~~~Pt~~lid~~G~ 449 (569)
.|+|.++||+++|+++|.
T Consensus 99 ~y~V~~~PTlilf~~gg~ 116 (470)
T 3qcp_A 99 KYDINFVPRLFFFYPRDS 116 (470)
T ss_dssp HTTCCSSCEEEEEEESSC
T ss_pred HcCCCccCeEEEEECCCc
Confidence 999999999999976553
No 429
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.00 E-value=3.3e-11 Score=100.24 Aligned_cols=71 Identities=17% Similarity=0.117 Sum_probs=52.4
Q ss_pred EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCCCCcc
Q 008336 40 IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIP 119 (569)
Q Consensus 40 vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P 119 (569)
+||+|||+||++|+.+.+.+...++.......+.++.|+++.+.. ..++..|+|.++|
T Consensus 21 ~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~~----------------------~~la~~~~V~g~P 78 (116)
T 3dml_A 21 RLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPLP----------------------PGLELARPVTFTP 78 (116)
T ss_dssp EEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCCC----------------------TTCBCSSCCCSSS
T ss_pred EEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCCc----------------------hhHHHHCCCCCCC
Confidence 999999999999999987665443321100026688888886521 2366789999999
Q ss_pred EEEEECCCCcEEEc
Q 008336 120 HLVILDENGKVLSD 133 (569)
Q Consensus 120 ~~~lid~~G~i~~~ 133 (569)
|+++++ +|+.+.+
T Consensus 79 T~i~f~-~G~ev~R 91 (116)
T 3dml_A 79 TFVLMA-GDVESGR 91 (116)
T ss_dssp EEEEEE-TTEEEEE
T ss_pred EEEEEE-CCEEEee
Confidence 999997 8988763
No 430
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.00 E-value=7.6e-09 Score=109.76 Aligned_cols=170 Identities=16% Similarity=0.183 Sum_probs=110.5
Q ss_pred hHHHHHHHHHHhcCCC-CEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCCC----CccEEEEECCCCc
Q 008336 55 FTPILAEVYNELSRQG-DFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVM----GIPHLVILDENGK 129 (569)
Q Consensus 55 ~~p~l~~~~~~~~~~g-~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~----~~P~~~lid~~G~ 129 (569)
....+.+++++++.++ .+.++.++.+... ...+.||+. ..|.+++++.++.
T Consensus 255 ~~~~~~~vA~~~~~k~~~i~F~~~D~~~~~------------------------~~l~~~gl~~~~~~~P~~~i~~~~~~ 310 (481)
T 3f8u_A 255 WRNRVMMVAKKFLDAGHKLNFAVASRKTFS------------------------HELSDFGLESTAGEIPVVAIRTAKGE 310 (481)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEEETTTTH------------------------HHHGGGTCCCCTTCSCEEEEECSSSC
T ss_pred HHHHHHHHHHHhcCCCceEEEEEEcHHHHH------------------------HHHHHcCCCcccCCCcEEEEEcCCCc
Confidence 4667888888887652 3777777766542 356788887 6899999986664
Q ss_pred EEEcCCcceeecccCCCCCccHH--HHHHHHHHHHHHHhhcccccccccCCC-----ceeecCCCceeeecc-ccCcEEE
Q 008336 130 VLSDGGVEIIREYGVEGYPFTVE--RIKEMKEQEERAKREQSLRSVLTSHSR-----DFVISSDGRKISVSD-LEGKTIG 201 (569)
Q Consensus 130 i~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~l~~~~~~~~~-----d~~~~~~~~~~~~~~-~~gk~v~ 201 (569)
..... -.++.+ .|.+++...... .+...+.+... ..+...+++.+.... .+++.++
T Consensus 311 ky~~~------------~~~t~e~~~l~~f~~~~~~g----~~~~~~~s~~~p~~~~~~v~~~~~~~~~~~~~~~~k~vl 374 (481)
T 3f8u_A 311 KFVMQ------------EEFSRDGKALERFLQDYFDG----NLKRYLKSEPIPESNDGPVKVVVAENFDEIVNNENKDVL 374 (481)
T ss_dssp EEECC------------SCCCTTSHHHHHHHHHHHHT----CCCCCCCCCCCCSCCCSSSEEECTTTHHHHHTCTTCEEE
T ss_pred ccCCC------------cccCccHHHHHHHHHHHhcC----CcccccccCCCCCCCCCCeEEecccCHHHHhhcCCCcEE
Confidence 33211 134555 777777654332 22222222211 112223333333222 2589999
Q ss_pred EEEecCCcccchhhhHHHHHHHHHHhcCCCceEEEEeeccccHHHHHHHhcCCCcccccCCchhHHHHHhhcccCCCceE
Q 008336 202 LYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLARYFELSTLPTL 281 (569)
Q Consensus 202 l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ei~~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~f~v~~~Ptl 281 (569)
++|+++||++|+.+.|.+.++++.+.... . ++++.+|.+. . .+++.|+|.++||+
T Consensus 375 v~f~a~wC~~C~~~~p~~~~l~~~~~~~~-~--v~~~~id~~~---------------------~-~~~~~~~v~~~Pt~ 429 (481)
T 3f8u_A 375 IEFYAPWCGHCKNLEPKYKELGEKLSKDP-N--IVIAKMDATA---------------------N-DVPSPYEVRGFPTI 429 (481)
T ss_dssp EEEECTTBHHHHHHHHHHHHHHHHTTTCS-S--EEEEEEETTS---------------------S-CCCTTCCCCSSSEE
T ss_pred EEEecCcChhHHHhhHHHHHHHHHhccCC-C--EEEEEEECCc---------------------h-hhHhhCCCcccCEE
Confidence 99999999999999999999999987642 3 5555555442 1 34578999999999
Q ss_pred EEECCCCC
Q 008336 282 VIIGPDGK 289 (569)
Q Consensus 282 vi~~~~g~ 289 (569)
+++..+++
T Consensus 430 ~~~~~~~~ 437 (481)
T 3f8u_A 430 YFSPANKK 437 (481)
T ss_dssp EEECTTCT
T ss_pred EEEeCCCe
Confidence 99987776
No 431
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.98 E-value=1.6e-09 Score=115.78 Aligned_cols=69 Identities=22% Similarity=0.501 Sum_probs=60.6
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
.+++++|+|||+||++|+++.|.|.++++.+++. ++.++.|+++..+ .+++.|+|
T Consensus 30 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~--~v~~~~vd~~~~~-----------------------~l~~~~~v 84 (504)
T 2b5e_A 30 SHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEK--NITLAQIDCTENQ-----------------------DLCMEHNI 84 (504)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT--TCEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccC--CeEEEEEECCCCH-----------------------HHHHhcCC
Confidence 4789999999999999999999999999999764 5889999888764 58999999
Q ss_pred CCccEEEEECCCCcE
Q 008336 436 SGIPMLVAIGPSGRT 450 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i 450 (569)
+++||++++. +|+.
T Consensus 85 ~~~Pt~~~~~-~g~~ 98 (504)
T 2b5e_A 85 PGFPSLKIFK-NSDV 98 (504)
T ss_dssp CSSSEEEEEE-TTCT
T ss_pred CcCCEEEEEe-CCcc
Confidence 9999999994 5663
No 432
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=98.96 E-value=3.9e-10 Score=105.91 Aligned_cols=89 Identities=15% Similarity=0.187 Sum_probs=66.6
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
+|+ |+|+|||+||++|+.+.|.|.++++++. ++.++.|+++ + ..++..|+|
T Consensus 119 ~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~---~v~f~~vd~~-~------------------------~~l~~~~~i 170 (217)
T 2trc_P 119 KVTTIVVNIYEDGVRGCDALNSSLECLAAEYP---MVKFCKIRAS-N------------------------TGAGDRFSS 170 (217)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT---TSEEEEEEHH-H------------------------HTCSTTSCG
T ss_pred CCcEEEEEEECCCCccHHHHHHHHHHHHHHCC---CeEEEEEECC-c------------------------HHHHHHCCC
Confidence 468 9999999999999999999999999884 4888888876 2 136678999
Q ss_pred CCccEEEEECCCCcEEEc-CCcceeecccCCCCCccHHHHHHHHH
Q 008336 116 MGIPHLVILDENGKVLSD-GGVEIIREYGVEGYPFTVERIKEMKE 159 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~ 159 (569)
.++||++++ ++|+++.. .|.. ..+ +..++.+.+..++.
T Consensus 171 ~~~PTl~~~-~~G~~v~~~~G~~---~~~--g~~~~~~~Le~~L~ 209 (217)
T 2trc_P 171 DVLPTLLVY-KGGELISNFISVA---EQF--AEDFFAADVESFLN 209 (217)
T ss_dssp GGCSEEEEE-ETTEEEEEETTGG---GGS--CSSCCHHHHHHHHH
T ss_pred CCCCEEEEE-ECCEEEEEEeCCc---ccC--cccCCHHHHHHHHH
Confidence 999999999 58988753 2211 111 12355567766654
No 433
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=98.95 E-value=3.7e-10 Score=98.59 Aligned_cols=67 Identities=16% Similarity=0.280 Sum_probs=50.2
Q ss_pred Cc-EEEEEecCC--CHhhHhhHHHHHHHHHHhcCCCCEE--EEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHh
Q 008336 38 GK-IGLYFSASW--CGPCQRFTPILAEVYNELSRQGDFE--VIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDEL 112 (569)
Q Consensus 38 gk-vlv~F~a~w--C~~C~~~~p~l~~~~~~~~~~g~~~--vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 112 (569)
++ ++|+||++| |++|+.+.|.|.++++++ + ++. ++.|++|.. ..+++.
T Consensus 34 ~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~--~v~~~~~~Vd~d~~------------------------~~la~~ 86 (142)
T 2es7_A 34 VGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P--QFDWQVAVADLEQS------------------------EAIGDR 86 (142)
T ss_dssp CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T--TSCCEEEEECHHHH------------------------HHHHHT
T ss_pred CCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c--ccceeEEEEECCCC------------------------HHHHHh
Confidence 45 888999887 999999999999999998 3 467 888887743 358899
Q ss_pred cCCCCccEEEEECCCCcEEE
Q 008336 113 FKVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 113 ~~v~~~P~~~lid~~G~i~~ 132 (569)
|+|+++||++++ ++|+++.
T Consensus 87 ~~V~~iPT~~~f-k~G~~v~ 105 (142)
T 2es7_A 87 FNVRRFPATLVF-TDGKLRG 105 (142)
T ss_dssp TTCCSSSEEEEE-SCC----
T ss_pred cCCCcCCeEEEE-eCCEEEE
Confidence 999999999999 8998875
No 434
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=98.47 E-value=9.6e-11 Score=96.43 Aligned_cols=69 Identities=32% Similarity=0.684 Sum_probs=58.7
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
.++ ++|+||++||++|+.+.|.+.++++++.. ++.++.|+++.+. .+++.|++
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~------------------------~~~~~~~v 71 (106)
T 2yj7_A 18 SDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG--KVKVVKVNVDENP------------------------NTAAQYGI 71 (106)
Confidence 467 99999999999999999999999998864 4778888777542 47889999
Q ss_pred CCccEEEEECCCCcEEE
Q 008336 116 MGIPHLVILDENGKVLS 132 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~ 132 (569)
.++|+++++ ++|+++.
T Consensus 72 ~~~Pt~~~~-~~g~~~~ 87 (106)
T 2yj7_A 72 RSIPTLLLF-KNGQVVD 87 (106)
Confidence 999999999 7888765
No 435
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=98.90 E-value=1.2e-10 Score=99.95 Aligned_cols=71 Identities=28% Similarity=0.594 Sum_probs=59.8
Q ss_pred CCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHh
Q 008336 34 DSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDEL 112 (569)
Q Consensus 34 ~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 112 (569)
+...++ ++|+||++||++|+.+.|.|.+++++++ ++.++.|+++... .+++.
T Consensus 32 ~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~v~~~~v~~~~~~------------------------~~~~~ 84 (130)
T 1wmj_A 32 AKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP---GAVFLKVDVDELK------------------------EVAEK 84 (130)
T ss_dssp HHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT---TBCCEECCTTTSG------------------------GGHHH
T ss_pred HhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC---CCEEEEEeccchH------------------------HHHHH
Confidence 334688 9999999999999999999999999885 3788888887542 47889
Q ss_pred cCCCCccEEEEECCCCcEEE
Q 008336 113 FKVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 113 ~~v~~~P~~~lid~~G~i~~ 132 (569)
|++.++|+++++ ++|+++.
T Consensus 85 ~~v~~~Pt~~~~-~~g~~~~ 103 (130)
T 1wmj_A 85 YNVEAMPTFLFI-KDGAEAD 103 (130)
T ss_dssp HTCCSSCCCCBC-TTTTCCB
T ss_pred cCCCccceEEEE-eCCeEEE
Confidence 999999998887 7888764
No 436
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.88 E-value=4.6e-09 Score=92.42 Aligned_cols=73 Identities=12% Similarity=0.247 Sum_probs=55.9
Q ss_pred CCEEEEEEecCCChhHHhhhHHH---HHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhc
Q 008336 357 GKTILLYFSAHWCPPCRAFLPKL---IDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKF 433 (569)
Q Consensus 357 gk~vll~F~a~wC~~C~~~~~~l---~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~ 433 (569)
+|+|+|+|+++||.+|+.+.... .++.+.+.+. +.++.++++.. + ...+.+.|
T Consensus 42 ~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~---fv~v~~d~~~~-~--------------------~~~l~~~y 97 (153)
T 2dlx_A 42 NKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREH---FIFWQVYHDSE-E--------------------GQRYIQFY 97 (153)
T ss_dssp TCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHT---EEEEEEESSSH-H--------------------HHHHHHHH
T ss_pred CCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcC---eEEEEEecCCH-h--------------------HHHHHHHc
Confidence 89999999999999999987654 4445555443 77777766532 1 34678899
Q ss_pred CCCCccEEEEECCC-CcEEEc
Q 008336 434 KVSGIPMLVAIGPS-GRTITK 453 (569)
Q Consensus 434 ~v~~~Pt~~lid~~-G~i~~~ 453 (569)
++.++|++++||++ |+.+.+
T Consensus 98 ~v~~~P~~~fld~~~G~~l~~ 118 (153)
T 2dlx_A 98 KLGDFPYVSILDPRTGQKLVE 118 (153)
T ss_dssp TCCSSSEEEEECTTTCCCCEE
T ss_pred CCCCCCEEEEEeCCCCcEeee
Confidence 99999999999998 866554
No 437
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.84 E-value=8e-09 Score=97.98 Aligned_cols=192 Identities=14% Similarity=0.114 Sum_probs=124.6
Q ss_pred Cc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCCC
Q 008336 38 GK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVM 116 (569)
Q Consensus 38 gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 116 (569)
.+ ++|-|+++|| ..+.+.+.++++.+. ++.+... .+ ..+++.|++.
T Consensus 27 ~~v~vVgff~~~~---~~~~~~f~~~A~~l~---~~~F~~t-~~--------------------------~~v~~~~~v~ 73 (227)
T 4f9z_D 27 TEVAVIGFFQDLE---IPAVPILHSMVQKFP---GVSFGIS-TD--------------------------SEVLTHYNIT 73 (227)
T ss_dssp SSEEEEEECSCSC---STHHHHHHHHTTTCT---TSEEEEE-CC--------------------------HHHHHHTTCC
T ss_pred CCeEEEEEecCCC---chhHHHHHHHHHhCC---CceEEEE-CC--------------------------HHHHHHcCCC
Confidence 45 8889999985 578899999999883 3555432 22 2488899999
Q ss_pred CccEEEEECCCC-cEEEcCCcceeecccCCCCCccHHHHHHHHHHHHHHHhhcccccccccCCCceeecCCCceeeeccc
Q 008336 117 GIPHLVILDENG-KVLSDGGVEIIREYGVEGYPFTVERIKEMKEQEERAKREQSLRSVLTSHSRDFVISSDGRKISVSDL 195 (569)
Q Consensus 117 ~~P~~~lid~~G-~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~~~~ 195 (569)
+ |+++++.+.. +....++ .+. .+++.+.|..++ ..+..+++...+.+++...-.
T Consensus 74 ~-p~i~lfk~~~~~~~~~~~-----~~~---g~~~~~~l~~fi----------------~~~~~plv~e~t~~n~~~~~~ 128 (227)
T 4f9z_D 74 G-NTICLFRLVDNEQLNLED-----EDI---ESIDATKLSRFI----------------EINSLHMVTEYNPVTVIGLFN 128 (227)
T ss_dssp S-SEEEEEETTTTEEEEECH-----HHH---HTCCHHHHHHHH----------------HHHCCCSEEECCHHHHHHHHH
T ss_pred C-CeEEEEEecCcccccccc-----ccc---CCCCHHHHHHHH----------------HHhCCCceeecCcccHHHHhc
Confidence 8 9999985422 1111110 000 023444555444 333455565555554433222
Q ss_pred cC-cEEEEEEecCCcccchhhhHHHHHHHHHHhcCCCceEEEEeeccccHHHHHHHhcCCCcccccCCchhHHHHHhhcc
Q 008336 196 EG-KTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLARYFE 274 (569)
Q Consensus 196 ~g-k~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ei~~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~f~ 274 (569)
.+ +.++++|..+||+.|..+.+.+.+++++++++ +.|+.+|.+... +++++++||
T Consensus 129 ~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~-----i~F~~vd~~~~~-------------------~~~~l~~fg 184 (227)
T 4f9z_D 129 SVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQGK-----ILFILVDSGMKE-------------------NGKVISFFK 184 (227)
T ss_dssp SSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTT-----CEEEEEETTSGG-------------------GHHHHHHTT
T ss_pred cCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhCC-----EEEEEeCCccHh-------------------HHHHHHHcC
Confidence 33 55667788889999999999999999999875 566666654211 456789999
Q ss_pred cC--CCceEEEECCCCC--chhhhhHHHHHhhCCCCCCCChHHHHHHHHHHHH
Q 008336 275 LS--TLPTLVIIGPDGK--TLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRA 323 (569)
Q Consensus 275 v~--~~Ptlvi~~~~g~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 323 (569)
+. ++|++++++..+. +.... -.++.+.+.+|.....+
T Consensus 185 l~~~~~P~~~i~~~~~~~ky~~~~------------~~~t~~~i~~Fv~~~~~ 225 (227)
T 4f9z_D 185 LKESQLPALAIYQTLDDEWDTLPT------------AEVSVEHVQNFCDGFLS 225 (227)
T ss_dssp CCGGGCSEEEEEESSSCCEEEETT------------CCCCHHHHHHHHHHHHT
T ss_pred CCcccCCEEEEEECCCCccccCCc------------CCCCHHHHHHHHHHHhC
Confidence 98 7999999985443 22111 14789999999887654
No 438
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.76 E-value=1.8e-08 Score=82.48 Aligned_cols=65 Identities=22% Similarity=0.408 Sum_probs=54.4
Q ss_pred EEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCCCc
Q 008336 359 TILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVSGI 438 (569)
Q Consensus 359 ~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~ 438 (569)
.+|+.||++||++|+...+.|.++.+++ ++.+..|++|.++ +++..|+++ +
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~-----~i~~~~vDId~d~-----------------------~l~~~ygv~-V 80 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKS-----WFELEVINIDGNE-----------------------HLTRLYNDR-V 80 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHS-----CCCCEEEETTTCH-----------------------HHHHHSTTS-C
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhc-----CCeEEEEECCCCH-----------------------HHHHHhCCC-C
Confidence 5789999999999999999999988776 3677888888775 377889997 9
Q ss_pred cEEEEECCCCcEEEc
Q 008336 439 PMLVAIGPSGRTITK 453 (569)
Q Consensus 439 Pt~~lid~~G~i~~~ 453 (569)
|+++++ .+|+.+..
T Consensus 81 P~l~~~-~dG~~v~~ 94 (107)
T 2fgx_A 81 PVLFAV-NEDKELCH 94 (107)
T ss_dssp SEEEET-TTTEEEEC
T ss_pred ceEEEE-ECCEEEEe
Confidence 999888 67888743
No 439
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.75 E-value=6.5e-09 Score=95.99 Aligned_cols=117 Identities=20% Similarity=0.277 Sum_probs=69.8
Q ss_pred HHHHHhhcccCCCceEEEECCCCCchhhhhHHHHHhhCCCCCCCChHHHHHHHHHHHHHHhhhhhhhhhccCC-ccceec
Q 008336 266 REKLARYFELSTLPTLVIIGPDGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGD-LDFVVG 344 (569)
Q Consensus 266 ~~~l~~~f~v~~~Ptlvi~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~f~~~ 344 (569)
....++.+||.++|++++ +|++..... +++.+.++.|.+.... ..+.+.+...+.. ..++.+
T Consensus 39 ~~~~a~~~gi~gvP~fvi---ngk~~~~~~------------~~~~~~~~~f~~~~~~--l~~~L~s~~~p~~~~~~~~g 101 (197)
T 1un2_A 39 QEKAAADVQLRGVPAMFV---NGKYQLNPQ------------GMDTSNMDVFVQQYAD--TVKYLSEKKGGGTGAQYEDG 101 (197)
T ss_dssp HHHHHHHTTCCSSSEEEE---TTTEEECGG------------GSCCSSHHHHHHHHHH--HHHHHTC---------CCBT
T ss_pred HHHHHHHcCCCcCCEEEE---cceEecCcc------------ccccccHHHHHHHHHH--HHHHHHhCcccccccccCCC
Confidence 456789999999999976 455432211 2233445544443333 3333433332221 122223
Q ss_pred CCCCceecccCCCCEEEEEEecCCChhHHhhhHHH---HHHHHHHhhcCCCeEEEEEeCCCC
Q 008336 345 KNGGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKL---IDAYKKIKERNESLEVVFISSDRD 403 (569)
Q Consensus 345 ~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l---~~l~~~~~~~~~~~~vv~is~d~~ 403 (569)
.+...+... ..++++||.||+.|||||+++.|.| .++.++++++ +.+..+.++..
T Consensus 102 ~~y~~l~~p-~~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~---v~~~~~~v~~~ 159 (197)
T 1un2_A 102 KQYTTLEKP-VAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEG---VKMTKYHVNFM 159 (197)
T ss_dssp TTEEECSSC-CTTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTT---CCEEEEECSSS
T ss_pred CCceEccCC-CCCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCC---CEEEEeccCcC
Confidence 333333211 2368999999999999999999998 8888888654 88888888754
No 440
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.74 E-value=1.4e-08 Score=80.10 Aligned_cols=58 Identities=22% Similarity=0.415 Sum_probs=45.9
Q ss_pred EEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCCCccE
Q 008336 361 LLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVSGIPM 440 (569)
Q Consensus 361 ll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~Pt 440 (569)
++.||++||++|+.+.|.|.++..++ +..|++|.++ ++++.|+++ +|+
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~--------~~~vdid~~~-----------------------~l~~~~g~~-vPt 50 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA--------FFSVFIDDDA-----------------------ALESAYGLR-VPV 50 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC--------EEEEECTTCH-----------------------HHHHHHTTT-CSE
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh--------eEEEECCCCH-----------------------HHHHHhCCC-cCe
Confidence 68899999999999999886543221 4567888765 478889998 999
Q ss_pred EEEECCCCcEEE
Q 008336 441 LVAIGPSGRTIT 452 (569)
Q Consensus 441 ~~lid~~G~i~~ 452 (569)
+++ .+|+.+.
T Consensus 51 l~~--~~G~~v~ 60 (87)
T 1ttz_A 51 LRD--PMGRELD 60 (87)
T ss_dssp EEC--TTCCEEE
T ss_pred EEE--ECCEEEe
Confidence 988 6788874
No 441
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=98.74 E-value=1.2e-08 Score=87.96 Aligned_cols=67 Identities=9% Similarity=0.109 Sum_probs=58.2
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008336 357 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 436 (569)
Q Consensus 357 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 436 (569)
+++|+|+||++ |++|+.+.|.|.+++++++++ +.++.|++|..+ .++..|||+
T Consensus 23 ~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk---~~f~~vd~d~~~-----------------------~~a~~~gi~ 75 (133)
T 2djk_A 23 GIPLAYIFAET-AEERKELSDKLKPIAEAQRGV---INFGTIDAKAFG-----------------------AHAGNLNLK 75 (133)
T ss_dssp TSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTT---SEEEEECTTTTG-----------------------GGTTTTTCC
T ss_pred CCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCe---EEEEEEchHHhH-----------------------HHHHHcCCC
Confidence 57899999999 899999999999999999875 889999888664 478899999
Q ss_pred C--ccEEEEECC-CCcE
Q 008336 437 G--IPMLVAIGP-SGRT 450 (569)
Q Consensus 437 ~--~Pt~~lid~-~G~i 450 (569)
+ +||+++++. +|+.
T Consensus 76 ~~~iPtl~i~~~~~g~~ 92 (133)
T 2djk_A 76 TDKFPAFAIQEVAKNQK 92 (133)
T ss_dssp SSSSSEEEEECTTTCCB
T ss_pred cccCCEEEEEecCcCcc
Confidence 9 999999964 4665
No 442
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.73 E-value=3.1e-08 Score=81.10 Aligned_cols=62 Identities=19% Similarity=0.343 Sum_probs=52.8
Q ss_pred EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCCCCcc
Q 008336 40 IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIP 119 (569)
Q Consensus 40 vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P 119 (569)
+++.||++||++|+...|.|.++++++. +.+..|+++.+++ +...|+++ +|
T Consensus 31 ~vv~y~~~~C~~C~~a~~~L~~l~~e~~----i~~~~vDId~d~~------------------------l~~~ygv~-VP 81 (107)
T 2fgx_A 31 KLVVYGREGCHLCEEMIASLRVLQKKSW----FELEVINIDGNEH------------------------LTRLYNDR-VP 81 (107)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHHHHSC----CCCEEEETTTCHH------------------------HHHHSTTS-CS
T ss_pred EEEEEeCCCChhHHHHHHHHHHHHHhcC----CeEEEEECCCCHH------------------------HHHHhCCC-Cc
Confidence 7899999999999999999999988852 7788889987754 77789997 99
Q ss_pred EEEEECCCCcEE
Q 008336 120 HLVILDENGKVL 131 (569)
Q Consensus 120 ~~~lid~~G~i~ 131 (569)
+++++ .+|+.+
T Consensus 82 ~l~~~-~dG~~v 92 (107)
T 2fgx_A 82 VLFAV-NEDKEL 92 (107)
T ss_dssp EEEET-TTTEEE
T ss_pred eEEEE-ECCEEE
Confidence 99877 578776
No 443
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.72 E-value=3.8e-08 Score=90.88 Aligned_cols=43 Identities=28% Similarity=0.363 Sum_probs=38.3
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSD 401 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d 401 (569)
.++++|+.||++|||+|+++.|.|.++.+++.++ +.++.+.++
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~---v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQD---VVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTT---EEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCC---eEEEEEecc
Confidence 4799999999999999999999999998888654 888888886
No 444
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.72 E-value=3e-08 Score=78.29 Aligned_cols=57 Identities=21% Similarity=0.283 Sum_probs=45.8
Q ss_pred EEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCCCCccE
Q 008336 41 GLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPH 120 (569)
Q Consensus 41 lv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P~ 120 (569)
++.||++||++|+...|.|.++..++ +..|++|.+++ +...|+++ +|+
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-------~~~vdid~~~~------------------------l~~~~g~~-vPt 50 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-------FFSVFIDDDAA------------------------LESAYGLR-VPV 50 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-------EEEEECTTCHH------------------------HHHHHTTT-CSE
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-------eEEEECCCCHH------------------------HHHHhCCC-cCe
Confidence 68899999999999999988764321 46788887754 77889998 999
Q ss_pred EEEECCCCcEE
Q 008336 121 LVILDENGKVL 131 (569)
Q Consensus 121 ~~lid~~G~i~ 131 (569)
+++ .+|+.+
T Consensus 51 l~~--~~G~~v 59 (87)
T 1ttz_A 51 LRD--PMGREL 59 (87)
T ss_dssp EEC--TTCCEE
T ss_pred EEE--ECCEEE
Confidence 887 678776
No 445
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=98.71 E-value=6.4e-09 Score=89.73 Aligned_cols=105 Identities=16% Similarity=0.200 Sum_probs=80.6
Q ss_pred cCcEEEEEEecCCcccchhhhHHHHHHHHHHhcCCCceEEEEeeccccHHHHHHHhcCCCcccccCCchhHHHHHhhccc
Q 008336 196 EGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLARYFEL 275 (569)
Q Consensus 196 ~gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ei~~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~f~v 275 (569)
.+.+++++|+++ |++|+.+.|.+.+++++++++ +.|+.+|.++ ...++++|||
T Consensus 22 ~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk-----~~f~~vd~d~---------------------~~~~a~~~gi 74 (133)
T 2djk_A 22 AGIPLAYIFAET-AEERKELSDKLKPIAEAQRGV-----INFGTIDAKA---------------------FGAHAGNLNL 74 (133)
T ss_dssp TTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTT-----SEEEEECTTT---------------------TGGGTTTTTC
T ss_pred CCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCe-----EEEEEEchHH---------------------hHHHHHHcCC
Confidence 446788999999 899999999999999988765 5566665543 4567899999
Q ss_pred CC--CceEEEECC-CCCchhhhhHHHHHhhCCCCCCCChHHHHHHHHHHHHHHhhhhhhhhhccC
Q 008336 276 ST--LPTLVIIGP-DGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSG 337 (569)
Q Consensus 276 ~~--~Ptlvi~~~-~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 337 (569)
++ +||+++++. +|+..... ..-.++.+.+.++......+...+.++|+.++.
T Consensus 75 ~~~~iPtl~i~~~~~g~~~~~~----------~~g~~~~~~l~~fi~~~l~Gkl~p~~kSe~iP~ 129 (133)
T 2djk_A 75 KTDKFPAFAIQEVAKNQKFPFD----------QEKEITFEAIKAFVDDFVAGKIEPSIKSEPIPE 129 (133)
T ss_dssp CSSSSSEEEEECTTTCCBCCCC----------SSSCCCHHHHHHHHHHHHHTCCCCSSCCCCCCT
T ss_pred CcccCCEEEEEecCcCcccCCC----------CccccCHHHHHHHHHHHHcCCcCccccCCCCCC
Confidence 98 999999985 45442110 001457889999999999999999998887655
No 446
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=98.69 E-value=6.9e-08 Score=91.96 Aligned_cols=84 Identities=11% Similarity=0.138 Sum_probs=61.1
Q ss_pred cCccCCceecCCCceeecCCCCCc-EEEEEe--cCCCHhhHhhHHHHHHHHHHhcC-CCCEEEEEEeCCC-----CHHHH
Q 008336 16 SSSARDFLIRSNGDQVKLDSLKGK-IGLYFS--ASWCGPCQRFTPILAEVYNELSR-QGDFEVIFVSGDE-----DDEAF 86 (569)
Q Consensus 16 g~~~pdf~~~~~g~~v~l~~~~gk-vlv~F~--a~wC~~C~~~~p~l~~~~~~~~~-~g~~~vv~v~~d~-----~~~~~ 86 (569)
|...+...+.++...+.----.++ |||.|| ||||+ +.|.|.++++++.. .+++.|+.|+++. +
T Consensus 11 ~~~~~~~v~~Lt~~nF~~vi~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n---- 82 (248)
T 2c0g_A 11 GSVTCTGCVDLDELSFEKTVERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELEN---- 82 (248)
T ss_dssp ----CTTCEECCTTTHHHHHTTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTT----
T ss_pred CCCCCCCcEECCHHHHHHHHhcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCccccccc----
Confidence 444444444444444432112456 999999 99999 99999999999965 3469999999886 3
Q ss_pred HHHHHhCCCcccccCCchhHHHHHHhcCCC--CccEEEEECCCCc
Q 008336 87 KGYFSKMPWLAVPFSDSETRDKLDELFKVM--GIPHLVILDENGK 129 (569)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~--~~P~~~lid~~G~ 129 (569)
..++..|+|+ ++||++++ + |+
T Consensus 83 --------------------~~la~~~~V~~~~~PTl~~F-~-G~ 105 (248)
T 2c0g_A 83 --------------------KALGDRYKVDDKNFPSIFLF-K-GN 105 (248)
T ss_dssp --------------------HHHHHHTTCCTTSCCEEEEE-S-SS
T ss_pred --------------------HHHHHHhCCCcCCCCeEEEE-e-CC
Confidence 3599999999 99999999 4 76
No 447
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.67 E-value=2.1e-07 Score=87.32 Aligned_cols=91 Identities=21% Similarity=0.335 Sum_probs=59.4
Q ss_pred cccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC---Ch----------------hHHHHHHh
Q 008336 352 VSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR---DQ----------------TSFDEFFK 412 (569)
Q Consensus 352 l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~---~~----------------~~~~~~~~ 412 (569)
+....+|++|+.||++|||+|+++.|.|.++.+. ++.|+.+.... .+ ..+.+++.
T Consensus 81 ~g~~~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~------~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~ 154 (216)
T 1eej_A 81 YKAPQEKHVITVFTDITCGYCHKLHEQMADYNAL------GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMA 154 (216)
T ss_dssp ECCTTCCEEEEEEECTTCHHHHHHHTTHHHHHHT------TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHT
T ss_pred ecCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhC------CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHh
Confidence 3344589999999999999999999999887542 37777765531 11 12333333
Q ss_pred cCCCc--ccccCchhhHHHHHhcCCCCccEEEEECCCCcE
Q 008336 413 GMPWL--ALPFGDARKASLSRKFKVSGIPMLVAIGPSGRT 450 (569)
Q Consensus 413 ~~~~~--~~~~~~d~~~~l~~~~~v~~~Pt~~lid~~G~i 450 (569)
..+.. ......+....+++.|||+++||+++. +|..
T Consensus 155 ~~~~~~~~~~~~v~~~~~l~~~~gV~gtPt~v~~--dG~~ 192 (216)
T 1eej_A 155 GKSVAPASCDVDIADHYALGVQLGVSGTPAVVLS--NGTL 192 (216)
T ss_dssp TCCCCCCCCSCCHHHHHHHHHHHTCCSSSEEECT--TSCE
T ss_pred CCCCChhHHHHHHHHHHHHHHHcCCCccCEEEEc--CCeE
Confidence 32210 122233566788999999999999654 5654
No 448
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.67 E-value=1.8e-07 Score=84.67 Aligned_cols=50 Identities=14% Similarity=0.250 Sum_probs=39.2
Q ss_pred CCceecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeC
Q 008336 347 GGKVPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISS 400 (569)
Q Consensus 347 g~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~ 400 (569)
+....+.+..++++|+.||.+|||+|+++.|.|.++.++++ ++.|++..+
T Consensus 12 ~~~~~~G~~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~----~v~~~~~~~ 61 (175)
T 3gyk_A 12 PNAPVLGNPEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADP----NVRLVYREW 61 (175)
T ss_dssp TTSCEEECTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT----TEEEEEEEC
T ss_pred CCCCCcCCCCCCEEEEEEECCCCccHHHHHHHHHHHHHhCC----CEEEEEEeC
Confidence 33445555568999999999999999999999999888764 366666654
No 449
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.66 E-value=1.6e-08 Score=78.67 Aligned_cols=65 Identities=22% Similarity=0.317 Sum_probs=48.0
Q ss_pred EEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCCCccE
Q 008336 361 LLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVSGIPM 440 (569)
Q Consensus 361 ll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~Pt 440 (569)
++.||++|||+|+++.+.|+++.+++. +.+..+.+|.+.+ ..++++.||++++|+
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~-----~~~~~~~v~~~~~--------------------~~~~~~~~gv~~vPt 58 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSK-----YTVEIVHLGTDKA--------------------RIAEAEKAGVKSVPA 58 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTT-----EEEEEEETTTCSS--------------------THHHHHHHTCCEEEE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcC-----CeEEEEEecCChh--------------------hHHHHHHcCCCcCCE
Confidence 567999999999999999988765542 4555666664311 124678899999999
Q ss_pred EEEECCCCcEEEc
Q 008336 441 LVAIGPSGRTITK 453 (569)
Q Consensus 441 ~~lid~~G~i~~~ 453 (569)
+++ +|+++..
T Consensus 59 ~~i---~g~~~~~ 68 (80)
T 2k8s_A 59 LVI---DGAAFHI 68 (80)
T ss_dssp EEE---TTEEEEE
T ss_pred EEE---CCEEEEe
Confidence 877 7887654
No 450
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.60 E-value=3.5e-08 Score=76.76 Aligned_cols=64 Identities=23% Similarity=0.302 Sum_probs=46.9
Q ss_pred EEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCCCCccE
Q 008336 41 GLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPH 120 (569)
Q Consensus 41 lv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P~ 120 (569)
++.||++|||+|+++.|.+.++.+++ ++.+..++++.+.+ ...+.+.||++++|+
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~----~~~~~~~~v~~~~~---------------------~~~~~~~~gv~~vPt 58 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPS----KYTVEIVHLGTDKA---------------------RIAEAEKAGVKSVPA 58 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTT----TEEEEEEETTTCSS---------------------THHHHHHHTCCEEEE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhc----CCeEEEEEecCChh---------------------hHHHHHHcCCCcCCE
Confidence 57799999999999999998876553 25555666663210 024678899999999
Q ss_pred EEEECCCCcEEE
Q 008336 121 LVILDENGKVLS 132 (569)
Q Consensus 121 ~~lid~~G~i~~ 132 (569)
+++ +|+++.
T Consensus 59 ~~i---~g~~~~ 67 (80)
T 2k8s_A 59 LVI---DGAAFH 67 (80)
T ss_dssp EEE---TTEEEE
T ss_pred EEE---CCEEEE
Confidence 876 787654
No 451
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.60 E-value=8.6e-08 Score=84.26 Aligned_cols=75 Identities=20% Similarity=0.287 Sum_probs=54.5
Q ss_pred CCCCCc-EEEEEecCCCHhhHhhHHHH---HHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHH
Q 008336 34 DSLKGK-IGLYFSASWCGPCQRFTPIL---AEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKL 109 (569)
Q Consensus 34 ~~~~gk-vlv~F~a~wC~~C~~~~p~l---~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 109 (569)
+.-.|| +||+|+++||+.|+.+.... .++.+.+.+ ++.++.++++.... ..+
T Consensus 38 Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~--~fv~v~~d~~~~~~----------------------~~l 93 (153)
T 2dlx_A 38 GQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE--HFIFWQVYHDSEEG----------------------QRY 93 (153)
T ss_dssp HHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH--TEEEEEEESSSHHH----------------------HHH
T ss_pred HHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc--CeEEEEEecCCHhH----------------------HHH
Confidence 334589 99999999999999985443 333333332 47888888764221 367
Q ss_pred HHhcCCCCccEEEEECCC-CcEEE
Q 008336 110 DELFKVMGIPHLVILDEN-GKVLS 132 (569)
Q Consensus 110 ~~~~~v~~~P~~~lid~~-G~i~~ 132 (569)
.+.|++.++|+++++|++ |+.+.
T Consensus 94 ~~~y~v~~~P~~~fld~~~G~~l~ 117 (153)
T 2dlx_A 94 IQFYKLGDFPYVSILDPRTGQKLV 117 (153)
T ss_dssp HHHHTCCSSSEEEEECTTTCCCCE
T ss_pred HHHcCCCCCCEEEEEeCCCCcEee
Confidence 889999999999999998 75543
No 452
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.57 E-value=1.8e-06 Score=92.33 Aligned_cols=68 Identities=15% Similarity=0.178 Sum_probs=58.5
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
.++..++.||++||++|+.+.|.|++++..+. ++.+..|++|..+ +++..|+|
T Consensus 116 ~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~----~v~~~~vd~~~~~-----------------------~~~~~~~i 168 (521)
T 1hyu_A 116 DGDFEFETYYSLSCHNCPDVVQALNLMAVLNP----RIKHTAIDGGTFQ-----------------------NEITERNV 168 (521)
T ss_dssp CSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT----TEEEEEEETTTCH-----------------------HHHHHTTC
T ss_pred CCCcceEEEECCCCcCcHHHHHHHHHHHhHcC----ceEEEEEechhhH-----------------------HHHHHhCC
Confidence 36788999999999999999999999887764 3888888888665 58999999
Q ss_pred CCccEEEEECCCCcEEEc
Q 008336 436 SGIPMLVAIGPSGRTITK 453 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~ 453 (569)
+++|++++ +|+.+..
T Consensus 169 ~svPt~~i---~g~~~~~ 183 (521)
T 1hyu_A 169 MGVPAVFV---NGKEFGQ 183 (521)
T ss_dssp CSSSEEEE---TTEEEEE
T ss_pred CccCEEEE---CCEEEec
Confidence 99999977 7888765
No 453
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=98.55 E-value=2.5e-07 Score=88.11 Aligned_cols=67 Identities=12% Similarity=0.205 Sum_probs=54.4
Q ss_pred CCEEEEEEe--cCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC--ChhHHHHHHhcCCCcccccCchhhHHHHHh
Q 008336 357 GKTILLYFS--AHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR--DQTSFDEFFKGMPWLALPFGDARKASLSRK 432 (569)
Q Consensus 357 gk~vll~F~--a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~--~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~ 432 (569)
+++|||.|| ||||+ +.|.|.++++.++....++.|+.|++|. ..+ +.++++.
T Consensus 33 ~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~--------------------n~~la~~ 88 (248)
T 2c0g_A 33 FPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELE--------------------NKALGDR 88 (248)
T ss_dssp SSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCT--------------------THHHHHH
T ss_pred CCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccc--------------------cHHHHHH
Confidence 689999999 99998 9999999999997511358888888776 100 1359999
Q ss_pred cCCC--CccEEEEECCCCc
Q 008336 433 FKVS--GIPMLVAIGPSGR 449 (569)
Q Consensus 433 ~~v~--~~Pt~~lid~~G~ 449 (569)
|+|+ ++||++++ + |+
T Consensus 89 ~~V~~~~~PTl~~F-~-G~ 105 (248)
T 2c0g_A 89 YKVDDKNFPSIFLF-K-GN 105 (248)
T ss_dssp TTCCTTSCCEEEEE-S-SS
T ss_pred hCCCcCCCCeEEEE-e-CC
Confidence 9999 99999999 4 76
No 454
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.54 E-value=3.9e-08 Score=82.40 Aligned_cols=68 Identities=21% Similarity=0.320 Sum_probs=46.5
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008336 357 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 436 (569)
Q Consensus 357 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 436 (569)
++++++ ||++||++|+++.|.|.++.. .+.++.|+.+.... +....+++.|++.
T Consensus 19 ~~~vv~-f~a~~C~~C~~~~~~l~~~~~-------~~~~v~v~~~~~~~------------------~~~~~l~~~~~v~ 72 (116)
T 2e7p_A 19 SAPVVV-FSKTYCGYCNRVKQLLTQVGA-------SYKVVELDELSDGS------------------QLQSALAHWTGRG 72 (116)
T ss_dssp SSSEEE-EECTTCHHHHHHHHHHHHHTC-------CCEEEEGGGSTTHH------------------HHHHHHHHHHSCC
T ss_pred CCCEEE-EECCCChhHHHHHHHHHHcCC-------CeEEEEccCCCChH------------------HHHHHHHHHhCCC
Confidence 455666 999999999999998876532 24444444333211 1123578899999
Q ss_pred CccEEEEECCCCcEEEc
Q 008336 437 GIPMLVAIGPSGRTITK 453 (569)
Q Consensus 437 ~~Pt~~lid~~G~i~~~ 453 (569)
++|++ ++ +|+++..
T Consensus 73 ~~Pt~-~~--~g~~v~~ 86 (116)
T 2e7p_A 73 TVPNV-FI--GGKQIGG 86 (116)
T ss_dssp SSCEE-EE--TTEEEEC
T ss_pred CcCEE-EE--CCEEECC
Confidence 99999 55 6888775
No 455
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=98.53 E-value=4.3e-07 Score=86.12 Aligned_cols=66 Identities=17% Similarity=0.231 Sum_probs=54.5
Q ss_pred CCc-EEEEEec--CCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCC---CHHHHHHHHHhCCCcccccCCchhHHHHH
Q 008336 37 KGK-IGLYFSA--SWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDE---DDEAFKGYFSKMPWLAVPFSDSETRDKLD 110 (569)
Q Consensus 37 ~gk-vlv~F~a--~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 110 (569)
.++ |||.||| |||+ +.|.|.++++.+...+++.|+.|++|+ +.. ..++
T Consensus 21 ~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~----------------------~~l~ 74 (240)
T 2qc7_A 21 KSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLN----------------------MELS 74 (240)
T ss_dssp GCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCS----------------------HHHH
T ss_pred CCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhh----------------------HHHH
Confidence 356 9999999 9999 999999999999754469999999764 111 3599
Q ss_pred HhcCCC--CccEEEEECCCCc
Q 008336 111 ELFKVM--GIPHLVILDENGK 129 (569)
Q Consensus 111 ~~~~v~--~~P~~~lid~~G~ 129 (569)
+.|+|+ ++||++++ ++|+
T Consensus 75 ~~~~V~~~~~PTl~~f-~~G~ 94 (240)
T 2qc7_A 75 EKYKLDKESYPVFYLF-RDGD 94 (240)
T ss_dssp HHTTCCGGGCSEEEEE-ETTC
T ss_pred HHcCCCCCCCCEEEEE-eCCC
Confidence 999999 99999999 5665
No 456
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.51 E-value=4.6e-07 Score=81.91 Aligned_cols=50 Identities=12% Similarity=0.201 Sum_probs=41.0
Q ss_pred CCceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeC
Q 008336 27 NGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSG 79 (569)
Q Consensus 27 ~g~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~ 79 (569)
++....+.+..++ +|+.||.+|||+|+++.|.+.++.+++. ++.++...+
T Consensus 11 ~~~~~~~G~~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~---~v~~~~~~~ 61 (175)
T 3gyk_A 11 DPNAPVLGNPEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADP---NVRLVYREW 61 (175)
T ss_dssp CTTSCEEECTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT---TEEEEEEEC
T ss_pred CCCCCCcCCCCCCEEEEEEECCCCccHHHHHHHHHHHHHhCC---CEEEEEEeC
Confidence 4555677778899 9999999999999999999999988754 466666654
No 457
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.51 E-value=3.5e-07 Score=85.82 Aligned_cols=92 Identities=20% Similarity=0.307 Sum_probs=59.7
Q ss_pred eecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCC---CH----------------HHHHHHH
Q 008336 31 VKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDE---DD----------------EAFKGYF 90 (569)
Q Consensus 31 v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~---~~----------------~~~~~~~ 90 (569)
+.+....++ +++.||++|||+|+++.|.+.++.+. ++.|+.+.... .. ..+.+++
T Consensus 79 ~~~g~~~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~-----~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~ 153 (216)
T 1eej_A 79 IVYKAPQEKHVITVFTDITCGYCHKLHEQMADYNAL-----GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVM 153 (216)
T ss_dssp EEECCTTCCEEEEEEECTTCHHHHHHHTTHHHHHHT-----TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHH
T ss_pred eeecCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhC-----CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHH
Confidence 444555788 99999999999999999999988652 37777765531 11 2233444
Q ss_pred HhCCCccccc-CCchhHHHHHHhcCCCCccEEEEECCCCc
Q 008336 91 SKMPWLAVPF-SDSETRDKLDELFKVMGIPHLVILDENGK 129 (569)
Q Consensus 91 ~~~~~~~~~~-~~~~~~~~l~~~~~v~~~P~~~lid~~G~ 129 (569)
...+...... ...+....+++.|||+++|++++. +|.
T Consensus 154 ~~~~~~~~~~~~~v~~~~~l~~~~gV~gtPt~v~~--dG~ 191 (216)
T 1eej_A 154 AGKSVAPASCDVDIADHYALGVQLGVSGTPAVVLS--NGT 191 (216)
T ss_dssp TTCCCCCCCCSCCHHHHHHHHHHHTCCSSSEEECT--TSC
T ss_pred hCCCCChhHHHHHHHHHHHHHHHcCCCccCEEEEc--CCe
Confidence 4433221111 122344678899999999998553 564
No 458
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.50 E-value=1.4e-06 Score=82.42 Aligned_cols=169 Identities=12% Similarity=0.119 Sum_probs=106.3
Q ss_pred CcEEEEEEecCCcccchhhhHHHHHHHHHHhcCCCceEEEEeeccccHHHHHHHhcCCCcccccCCchhHHHHHhhcccC
Q 008336 197 GKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLARYFELS 276 (569)
Q Consensus 197 gk~v~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ei~~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~f~v~ 276 (569)
.+.+++-|+.+| |....+.+.+++..+. . +.|.... ...+++.|+++
T Consensus 27 ~~v~vVgff~~~---~~~~~~~f~~~A~~l~-~-----~~F~~t~------------------------~~~v~~~~~v~ 73 (227)
T 4f9z_D 27 TEVAVIGFFQDL---EIPAVPILHSMVQKFP-G-----VSFGIST------------------------DSEVLTHYNIT 73 (227)
T ss_dssp SSEEEEEECSCS---CSTHHHHHHHHTTTCT-T-----SEEEEEC------------------------CHHHHHHTTCC
T ss_pred CCeEEEEEecCC---CchhHHHHHHHHHhCC-C-----ceEEEEC------------------------CHHHHHHcCCC
Confidence 356667777776 5678888888888773 2 3333321 23567889998
Q ss_pred CCceEEEECCCC-Cc-hhhhhHHHHHhhCCCCCCCChHHHHHHHHHHHHHHhhhhhhhhhccCCccceecCCCCce-ecc
Q 008336 277 TLPTLVIIGPDG-KT-LHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGDLDFVVGKNGGKV-PVS 353 (569)
Q Consensus 277 ~~Ptlvi~~~~g-~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~f~~~~~g~~v-~l~ 353 (569)
+ |+++++.+.. +. .+..... | +++.+.+..++..... |-+. ..+.... .+-
T Consensus 74 ~-p~i~lfk~~~~~~~~~~~~~~-----g----~~~~~~l~~fi~~~~~---------------plv~-e~t~~n~~~~~ 127 (227)
T 4f9z_D 74 G-NTICLFRLVDNEQLNLEDEDI-----E----SIDATKLSRFIEINSL---------------HMVT-EYNPVTVIGLF 127 (227)
T ss_dssp S-SEEEEEETTTTEEEEECHHHH-----H----TCCHHHHHHHHHHHCC---------------CSEE-ECCHHHHHHHH
T ss_pred C-CeEEEEEecCccccccccccc-----C----CCCHHHHHHHHHHhCC---------------Ccee-ecCcccHHHHh
Confidence 8 9999998532 21 1111000 0 4577777777764321 1111 1111110 000
Q ss_pred cCCC-CEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHh
Q 008336 354 DLAG-KTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRK 432 (569)
Q Consensus 354 ~~~g-k~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~ 432 (569)
+ .+ +.++|.|..+||+.|...++.+.+++++++++ +.++.++.+... ...+.+.
T Consensus 128 ~-~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~---i~F~~vd~~~~~---------------------~~~~l~~ 182 (227)
T 4f9z_D 128 N-SVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQGK---ILFILVDSGMKE---------------------NGKVISF 182 (227)
T ss_dssp H-SSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTT---CEEEEEETTSGG---------------------GHHHHHH
T ss_pred c-cCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhCC---EEEEEeCCccHh---------------------HHHHHHH
Confidence 1 13 45666777899999999999999999999875 888888776432 1246688
Q ss_pred cCCC--CccEEEEECCCCc
Q 008336 433 FKVS--GIPMLVAIGPSGR 449 (569)
Q Consensus 433 ~~v~--~~Pt~~lid~~G~ 449 (569)
||+. .+|++.+++..+.
T Consensus 183 fgl~~~~~P~~~i~~~~~~ 201 (227)
T 4f9z_D 183 FKLKESQLPALAIYQTLDD 201 (227)
T ss_dssp TTCCGGGCSEEEEEESSSC
T ss_pred cCCCcccCCEEEEEECCCC
Confidence 9998 8999999986554
No 459
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.46 E-value=1.8e-07 Score=78.30 Aligned_cols=67 Identities=21% Similarity=0.472 Sum_probs=46.3
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
.++ +++ ||++|||+|+.+.|.|.++.. .+.++.|+.+...... ...+.+.|++
T Consensus 18 ~~~~vv~-f~a~~C~~C~~~~~~l~~~~~------~~~~v~v~~~~~~~~~-------------------~~~l~~~~~v 71 (116)
T 2e7p_A 18 SSAPVVV-FSKTYCGYCNRVKQLLTQVGA------SYKVVELDELSDGSQL-------------------QSALAHWTGR 71 (116)
T ss_dssp TSSSEEE-EECTTCHHHHHHHHHHHHHTC------CCEEEEGGGSTTHHHH-------------------HHHHHHHHSC
T ss_pred cCCCEEE-EECCCChhHHHHHHHHHHcCC------CeEEEEccCCCChHHH-------------------HHHHHHHhCC
Confidence 345 666 999999999999999888742 2445555444332111 1358889999
Q ss_pred CCccEEEEECCCCcEEE
Q 008336 116 MGIPHLVILDENGKVLS 132 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~ 132 (569)
.++|++ ++ +|+++.
T Consensus 72 ~~~Pt~-~~--~g~~v~ 85 (116)
T 2e7p_A 72 GTVPNV-FI--GGKQIG 85 (116)
T ss_dssp CSSCEE-EE--TTEEEE
T ss_pred CCcCEE-EE--CCEEEC
Confidence 999999 44 677764
No 460
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.45 E-value=9.6e-07 Score=81.11 Aligned_cols=43 Identities=23% Similarity=0.372 Sum_probs=37.0
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSD 401 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d 401 (569)
.++++|+.||++|||+|+.+.|.|.++.+++.++ +.+..+.+.
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~---v~~~~~p~~ 66 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPAD---VHFVRLPAL 66 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTT---EEEEEEECC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCCC---eEEEEEehh
Confidence 4899999999999999999999999988888654 777777664
No 461
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.45 E-value=1.7e-06 Score=79.70 Aligned_cols=42 Identities=24% Similarity=0.290 Sum_probs=37.5
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD 80 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d 80 (569)
.++ +|+.||++|||+|+++.|.+.++.+++.+ ++.++.+.++
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ--DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT--TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC--CeEEEEEecc
Confidence 578 99999999999999999999999998875 4888888876
No 462
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.43 E-value=9.3e-07 Score=81.37 Aligned_cols=43 Identities=23% Similarity=0.305 Sum_probs=37.0
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSD 401 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d 401 (569)
.++++|+.||.+|||+|..+.|.|.++.++++.+ +.+..+.+.
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~---v~~~~~p~~ 63 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSD---AYLRTEHVV 63 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCTT---EEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCCc---eEEEEeccc
Confidence 4789999999999999999999999998888643 777777764
No 463
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=98.41 E-value=8e-07 Score=84.25 Aligned_cols=66 Identities=17% Similarity=0.251 Sum_probs=54.3
Q ss_pred CCEEEEEEec--CCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC---ChhHHHHHHhcCCCcccccCchhhHHHHH
Q 008336 357 GKTILLYFSA--HWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR---DQTSFDEFFKGMPWLALPFGDARKASLSR 431 (569)
Q Consensus 357 gk~vll~F~a--~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~---~~~~~~~~~~~~~~~~~~~~~d~~~~l~~ 431 (569)
+++|||.||| |||+ +.|.|.++++.+++. .++.|+.|++|. +. ..++++
T Consensus 22 ~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~-~~v~~akVDvd~~g~~~---------------------~~~l~~ 75 (240)
T 2qc7_A 22 SKFVLVKFDTQYPYGE----KQDEFKRLAENSASS-DDLLVAEVGISDYGDKL---------------------NMELSE 75 (240)
T ss_dssp CSEEEEEECCSSCCSH----HHHHHHHHHHHHTTC-TTEEEEEECCCCSSSCC---------------------SHHHHH
T ss_pred CCCEEEEEeCCCCCCc----chHHHHHHHHHhcCC-CCeEEEEEeCCcccchh---------------------hHHHHH
Confidence 6899999999 9999 999999999999742 358888888663 11 236999
Q ss_pred hcCCC--CccEEEEECCCCc
Q 008336 432 KFKVS--GIPMLVAIGPSGR 449 (569)
Q Consensus 432 ~~~v~--~~Pt~~lid~~G~ 449 (569)
.|+|+ ++||++++ ++|+
T Consensus 76 ~~~V~~~~~PTl~~f-~~G~ 94 (240)
T 2qc7_A 76 KYKLDKESYPVFYLF-RDGD 94 (240)
T ss_dssp HTTCCGGGCSEEEEE-ETTC
T ss_pred HcCCCCCCCCEEEEE-eCCC
Confidence 99999 99999999 6676
No 464
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.39 E-value=1.1e-07 Score=92.40 Aligned_cols=62 Identities=18% Similarity=0.420 Sum_probs=43.4
Q ss_pred EEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCCCcc
Q 008336 360 ILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVSGIP 439 (569)
Q Consensus 360 vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~P 439 (569)
.+++|||+|||||+++.|.++++++++ . .+.+|.... .+...+++++|+|+++|
T Consensus 200 ~vV~F~A~WC~~Ck~l~p~le~lA~~l-------~--~Vd~d~~d~-----------------~~~~~~la~~~gI~~vP 253 (291)
T 3kp9_A 200 GGTMYGAYWCPHCQDQKELFGAAFDQV-------P--YVECSPNGP-----------------GTPQAQECTEAGITSYP 253 (291)
T ss_dssp TCEEEECTTCHHHHHHHHHHGGGGGGS-------C--EEESCSSCS-----------------SSCCCHHHHTTTCCSTT
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHc-------C--EEEEeecCc-----------------hhhHHHHHHHcCCcccC
Confidence 468999999999999999998876443 2 344442100 00124689999999999
Q ss_pred EEEEECCCCcE
Q 008336 440 MLVAIGPSGRT 450 (569)
Q Consensus 440 t~~lid~~G~i 450 (569)
|+++ +|+.
T Consensus 254 T~~i---~G~~ 261 (291)
T 3kp9_A 254 TWII---NGRT 261 (291)
T ss_dssp EEEE---TTEE
T ss_pred eEEE---CCEE
Confidence 9655 6764
No 465
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.38 E-value=6.6e-07 Score=70.10 Aligned_cols=66 Identities=15% Similarity=0.270 Sum_probs=49.6
Q ss_pred EEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcC--CCCc
Q 008336 361 LLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFK--VSGI 438 (569)
Q Consensus 361 ll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~--v~~~ 438 (569)
++.|+++|||+|++..+.|.++..+++ ++.+..++++.++. ...++.+.++ +.++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~----~i~~~~vdi~~~~~-------------------~~~~l~~~~~~~~~~v 59 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD----DFQYQYVDIRAEGI-------------------TKEDLQQKAGKPVETV 59 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS----SCEEEEECHHHHTC-------------------CSHHHHHHTCCCSCCS
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC----CceEEEEecccChH-------------------HHHHHHHHhCCCCcee
Confidence 677999999999999999999887753 47788777653321 0135788888 9999
Q ss_pred cEEEEECCCCcEEE
Q 008336 439 PMLVAIGPSGRTIT 452 (569)
Q Consensus 439 Pt~~lid~~G~i~~ 452 (569)
|+++ + +|+.+.
T Consensus 60 P~i~-~--~g~~i~ 70 (85)
T 1ego_A 60 PQIF-V--DQQHIG 70 (85)
T ss_dssp CEEE-E--TTEEEE
T ss_pred CeEE-E--CCEEEE
Confidence 9984 4 577765
No 466
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=98.37 E-value=1.8e-05 Score=75.98 Aligned_cols=206 Identities=10% Similarity=0.118 Sum_probs=119.1
Q ss_pred EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCCCCcc
Q 008336 40 IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIP 119 (569)
Q Consensus 40 vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P 119 (569)
++|-|+++|| ....+.+.++++.+++. +.+..+ .+ ..+++.|++.+ |
T Consensus 27 ~vvgff~~~~---~~~~~~f~~~A~~lr~~--~~F~~~-~~--------------------------~~v~~~~~~~~-p 73 (252)
T 2h8l_A 27 SIVGFFDDSF---SEAHSEFLKAASNLRDN--YRFAHT-NV--------------------------ESLVNEYDDNG-E 73 (252)
T ss_dssp EEEEEESCTT---SHHHHHHHHHHHHTTTT--SCEEEE-CC--------------------------HHHHHHHCSSS-E
T ss_pred EEEEEECCCC---ChHHHHHHHHHHhcccC--cEEEEE-Ch--------------------------HHHHHHhCCCC-C
Confidence 7888999985 45677899999998654 444433 22 24788899997 9
Q ss_pred EEEEECCCCcEEEc-CCcceeecc-cCCCCCccHHHHHHHHHHHHHHHhhcccccccccCCCceeecCCCceeeeccccC
Q 008336 120 HLVILDENGKVLSD-GGVEIIREY-GVEGYPFTVERIKEMKEQEERAKREQSLRSVLTSHSRDFVISSDGRKISVSDLEG 197 (569)
Q Consensus 120 ~~~lid~~G~i~~~-~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~~~~~g 197 (569)
+++++.+ +++... +... ..| .. .++.+.|..++.. +..+.+...+.++.... ..+
T Consensus 74 ~i~~fk~-~~~~~kf~e~~--~~y~~g---~~~~~~l~~fi~~----------------~~~Plv~e~t~~n~~~~-~~~ 130 (252)
T 2h8l_A 74 GIILFRP-SHLTNKFEDKT--VAYTEQ---KMTSGKIKKFIQE----------------NIFGICPHMTEDNKDLI-QGK 130 (252)
T ss_dssp EEEEECC-GGGCCTTSCSE--EECCCS---SCCHHHHHHHHHH----------------HSSCSSCEECTTTHHHH-SSS
T ss_pred cEEEEcc-hhhcccccccc--cccCCC---CcCHHHHHHHHHh----------------cccCCeeecccccHhhh-cCC
Confidence 9998853 221111 0000 112 11 2455666655533 23344544444443332 233
Q ss_pred cEEEEEEecCCcccc----hhhhHHHHHHHHHHhcCCCceEEEEeeccccHHHHHHHhcCCCcccccCCchhHHHHHhhc
Q 008336 198 KTIGLYFSMSSYKAS----AEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLARYF 273 (569)
Q Consensus 198 k~v~l~f~~~~~~~c----~~~~~~~~~~~~~~~~~~~~~ei~~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~f 273 (569)
. +++.|+...+... ..+...+.++++++++++..+ .|+.+|.+. ..+++++|
T Consensus 131 ~-~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~~--~F~~~d~~~---------------------~~~~~~~f 186 (252)
T 2h8l_A 131 D-LLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKL--NFAVASRKT---------------------FSHELSDF 186 (252)
T ss_dssp S-EEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCCC--EEEEEETTT---------------------THHHHGGG
T ss_pred C-eEEEEeecchhhcchhHHHHHHHHHHHHHHccccCceE--EEEEEchHH---------------------HHHHHHHc
Confidence 3 3444443322211 246777888999998765444 455555443 45678999
Q ss_pred cc--C--CCceEEEECCCCCchhhhhHHHHHhhCCCCCCCChHH--HHHHHHHHHHHHhhhhhhhhhccC
Q 008336 274 EL--S--TLPTLVIIGPDGKTLHSNVAEAIEEHGVGAFPFTPEK--FAELAEIQRAKEESQTLESVLVSG 337 (569)
Q Consensus 274 ~v--~--~~Ptlvi~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~ 337 (569)
|+ . .+|.+++++.+++.... . -.++.+. +.+|......+...+.++|+.++.
T Consensus 187 gl~~~~~~~P~v~i~~~~~~ky~~-----------~-~~~t~~~~~i~~F~~~~~~Gkl~~~~kSe~iPe 244 (252)
T 2h8l_A 187 GLESTAGEIPVVAIRTAKGEKFVM-----------Q-EEFSRDGKALERFLQDYFDGNLKRYLKSEPIPE 244 (252)
T ss_dssp TCCCCSCSSCEEEEECTTSCEEEC-----------C-SCCCTTSHHHHHHHHHHHHTCSCCCC-------
T ss_pred CCCCccCCCCEEEEEeCcCcEecC-----------C-cccCcchHHHHHHHHHHHCCCccccccCCCCCC
Confidence 99 3 69999999765432110 0 1467777 999999999999988888877655
No 467
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.36 E-value=1.4e-06 Score=83.16 Aligned_cols=93 Identities=10% Similarity=0.153 Sum_probs=59.2
Q ss_pred ccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC---C-------------hhH-HHHHHhcCC
Q 008336 353 SDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR---D-------------QTS-FDEFFKGMP 415 (569)
Q Consensus 353 ~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~---~-------------~~~-~~~~~~~~~ 415 (569)
..-.++++|+.|+.+|||+|+++.+.+.++.+. + ++.|+.+.+.. . +.. |..+...+.
T Consensus 93 G~~~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g---~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~ 167 (241)
T 1v58_A 93 GKKDAPVIVYVFADPFCPYCKQFWQQARPWVDS--G---KVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGG 167 (241)
T ss_dssp SCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHT--T---SEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTT
T ss_pred CCCCCCeEEEEEECCCChhHHHHHHHHHHHHhC--C---cEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhc
Confidence 333478999999999999999999998876553 2 47777766521 1 111 111111110
Q ss_pred --Ccc--------cccCchhhHHHHHhcCCCCccEEEEECCCCcE
Q 008336 416 --WLA--------LPFGDARKASLSRKFKVSGIPMLVAIGPSGRT 450 (569)
Q Consensus 416 --~~~--------~~~~~d~~~~l~~~~~v~~~Pt~~lid~~G~i 450 (569)
.+. .....+....+++.++|+++||+++.+.+|++
T Consensus 168 ~~~l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~ 212 (241)
T 1v58_A 168 KLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTL 212 (241)
T ss_dssp CCCCCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEE
T ss_pred cCCCCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCE
Confidence 000 00012344567889999999999999888975
No 468
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.33 E-value=1e-06 Score=71.53 Aligned_cols=63 Identities=16% Similarity=0.314 Sum_probs=46.8
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCC
Q 008336 357 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVS 436 (569)
Q Consensus 357 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~ 436 (569)
.+++++.|+++||++|+...+.|.++. . ++.+..|++|... ..++++.|+ .
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~----~---~i~~~~vdi~~~~---------------------~~el~~~~g-~ 65 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYK----D---RFILQEVDITLPE---------------------NSTWYERYK-F 65 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTS----S---SSEEEEEETTSST---------------------THHHHHHSS-S
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhh----h---CCeEEEEECCCcc---------------------hHHHHHHHC-C
Confidence 457888999999999999999886543 2 2678888887211 135888999 9
Q ss_pred CccEEEEECCCCcEE
Q 008336 437 GIPMLVAIGPSGRTI 451 (569)
Q Consensus 437 ~~Pt~~lid~~G~i~ 451 (569)
++|+++ + +|+.+
T Consensus 66 ~vP~l~-~--~g~~~ 77 (100)
T 1wjk_A 66 DIPVFH-L--NGQFL 77 (100)
T ss_dssp SCSEEE-E--SSSEE
T ss_pred CCCEEE-E--CCEEE
Confidence 999864 4 57664
No 469
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.33 E-value=6e-07 Score=70.34 Aligned_cols=66 Identities=21% Similarity=0.390 Sum_probs=49.3
Q ss_pred EEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcC--CCCc
Q 008336 41 GLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFK--VMGI 118 (569)
Q Consensus 41 lv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--v~~~ 118 (569)
++.||++|||+|++..+.|.++..++. ++.+..++++.+.. ....+.+.++ +.++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~---~i~~~~vdi~~~~~--------------------~~~~l~~~~~~~~~~v 59 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD---DFQYQYVDIRAEGI--------------------TKEDLQQKAGKPVETV 59 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS---SCEEEEECHHHHTC--------------------CSHHHHHHTCCCSCCS
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC---CceEEEEecccChH--------------------HHHHHHHHhCCCCcee
Confidence 678999999999999999999988764 37788887653210 0125778888 9999
Q ss_pred cEEEEECCCCcEEE
Q 008336 119 PHLVILDENGKVLS 132 (569)
Q Consensus 119 P~~~lid~~G~i~~ 132 (569)
|+++ + +|+.+.
T Consensus 60 P~i~-~--~g~~i~ 70 (85)
T 1ego_A 60 PQIF-V--DQQHIG 70 (85)
T ss_dssp CEEE-E--TTEEEE
T ss_pred CeEE-E--CCEEEE
Confidence 9984 4 576653
No 470
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=98.30 E-value=1.3e-05 Score=76.74 Aligned_cols=208 Identities=13% Similarity=0.102 Sum_probs=120.4
Q ss_pred Cc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCCC
Q 008336 38 GK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVM 116 (569)
Q Consensus 38 gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 116 (569)
.+ ++|-|++++|. ...+.+.++++.+++. +.+... .+ ..+++.|++.
T Consensus 25 ~~v~vVgff~~~~~---~~~~~F~~~A~~lr~~--~~F~~t-~~--------------------------~~v~~~~~v~ 72 (250)
T 3ec3_A 25 DDVVILGVFQGVGD---PGYLQYQDAANTLRED--YKFHHT-FS--------------------------TEIAKFLKVS 72 (250)
T ss_dssp SSCEEEEECSCTTC---HHHHHHHHHHHHHTTT--CCEEEE-CC--------------------------HHHHHHHTCC
T ss_pred CCeEEEEEEcCCCc---hHHHHHHHHHHhhhcC--cEEEEE-Cc--------------------------HHHHHHcCCC
Confidence 45 88889998854 6778899999998754 444332 22 2477789998
Q ss_pred CccEEEEECCCCcEEEc-CCcceeecccCCCCCccHHHHHHHHHHHHHHHhhcccccccccCCCceeecCCCceeeeccc
Q 008336 117 GIPHLVILDENGKVLSD-GGVEIIREYGVEGYPFTVERIKEMKEQEERAKREQSLRSVLTSHSRDFVISSDGRKISVSDL 195 (569)
Q Consensus 117 ~~P~~~lid~~G~i~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~~~~ 195 (569)
+ |+++++.++ ....+ +.... .|... .+++.+.|..++ ..+..+++...+.++.....
T Consensus 73 ~-p~ivlfk~~-~~~~kfde~~~--~y~g~-~~~~~~~l~~fi----------------~~~~~Plv~e~t~~n~~~~~- 130 (250)
T 3ec3_A 73 L-GKLVLMQPE-KFQSKYEPRMH--VMDVQ-GSTEASAIKDYV----------------VKHALPLVGHRKTSNDAKRY- 130 (250)
T ss_dssp S-SEEEEECCG-GGCCTTSCSCE--EEECC-TTSCHHHHHHHH----------------HHHSSCTEEEECTTTHHHHS-
T ss_pred C-CeEEEEecc-hhhccccccce--eccCC-CCCCHHHHHHHH----------------HHcCCCceeecCccchhhhh-
Confidence 7 999999542 11100 00000 11100 134555555544 33445666555555443222
Q ss_pred cCcEEEEEEecCC-c----ccchhhhHHHHHHHHHHhcCCCceEEEEeeccccHHHHHHHhcCCCcccccCCchhHHHHH
Q 008336 196 EGKTIGLYFSMSS-Y----KASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLA 270 (569)
Q Consensus 196 ~gk~v~l~f~~~~-~----~~c~~~~~~~~~~~~~~~~~~~~~ei~~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~l~ 270 (569)
.++.+.+.|+... . .....+...+.+++++++ + +.|+.+|.+. ..+.+
T Consensus 131 ~~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k-k-----i~F~~~d~~~---------------------~~~~l 183 (250)
T 3ec3_A 131 SKRPLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP-E-----YTFAIADEED---------------------YATEV 183 (250)
T ss_dssp CSSSEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT-T-----SEEEEEETTT---------------------THHHH
T ss_pred ccCccEEEEEecccccccchhHHHHHHHHHHHHHhhc-c-----eeEEEEcHHH---------------------HHHHH
Confidence 3555556555432 2 223446677777777776 4 6666666543 44567
Q ss_pred hhcccCC--C-ceEEEECCCCC-chhhhhHHHHHhhCCCCCCCChHHHHHHHHHHHHHHhhhhhhhhhccCC
Q 008336 271 RYFELST--L-PTLVIIGPDGK-TLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGD 338 (569)
Q Consensus 271 ~~f~v~~--~-Ptlvi~~~~g~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 338 (569)
++||+.. . |.+++++.++. +... .-.++.+.+.+|.....+++..+.++|+.++..
T Consensus 184 ~~fgl~~~~~~p~~~~~~~~~~ky~~~------------~~~~t~~~i~~Fv~~~~~Gkl~p~~kSepiPe~ 243 (250)
T 3ec3_A 184 KDLGLSESGGDVNAAILDESGKKFAME------------PEEFDSDALREFVMAFKKGKLKPVIKSQPVPKN 243 (250)
T ss_dssp HHTTCSSCSCSCEEEEECTTSCEEECC------------CCSCCHHHHHHHHHHHHTTCCCCCC--------
T ss_pred HHcCCCccCCCcEEEEEcCCCceecCC------------cccCCHHHHHHHHHHHHCCCccceeecCCCCCC
Confidence 8999973 4 57888875543 2221 114799999999999999999999999877653
No 471
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=98.23 E-value=7.8e-06 Score=74.93 Aligned_cols=42 Identities=21% Similarity=0.337 Sum_probs=36.0
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISS 400 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~ 400 (569)
.++++|+.||.+|||+|..+.+.+.++.+++.. ++.+..+.+
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~---~v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK---DVRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT---TEEEEEEEC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCC---ceEEEEeCc
Confidence 478899999999999999999999988888754 377777776
No 472
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.23 E-value=1.7e-06 Score=70.18 Aligned_cols=60 Identities=23% Similarity=0.347 Sum_probs=45.0
Q ss_pred EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCCCCcc
Q 008336 40 IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIP 119 (569)
Q Consensus 40 vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P 119 (569)
+++.||++|||+|+...|.|.++.+ ++.+..|+++.... .++.+.|+ .++|
T Consensus 18 ~v~~f~~~~C~~C~~~~~~L~~l~~------~i~~~~vdi~~~~~----------------------~el~~~~g-~~vP 68 (100)
T 1wjk_A 18 VLTLFTKAPCPLCDEAKEVLQPYKD------RFILQEVDITLPEN----------------------STWYERYK-FDIP 68 (100)
T ss_dssp EEEEEECSSCHHHHHHHHHTSTTSS------SSEEEEEETTSSTT----------------------HHHHHHSS-SSCS
T ss_pred EEEEEeCCCCcchHHHHHHHHHhhh------CCeEEEEECCCcch----------------------HHHHHHHC-CCCC
Confidence 8888999999999999998876532 27788888882111 25788999 9999
Q ss_pred EEEEECCCCcEE
Q 008336 120 HLVILDENGKVL 131 (569)
Q Consensus 120 ~~~lid~~G~i~ 131 (569)
+++ + +|+.+
T Consensus 69 ~l~-~--~g~~~ 77 (100)
T 1wjk_A 69 VFH-L--NGQFL 77 (100)
T ss_dssp EEE-E--SSSEE
T ss_pred EEE-E--CCEEE
Confidence 764 4 56653
No 473
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.21 E-value=4.3e-06 Score=77.95 Aligned_cols=86 Identities=21% Similarity=0.304 Sum_probs=54.8
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC---Chh----------------HHHHHHhcCCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR---DQT----------------SFDEFFKGMPW 416 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~---~~~----------------~~~~~~~~~~~ 416 (569)
.++++|+.||++|||+|+++.|.|.++.+ . ++.|..+.... .+. .+..++.....
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~----~--~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~ 158 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYND----L--GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLP 158 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHH----T--TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHh----C--CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCC
Confidence 37899999999999999999999887543 1 36776654431 111 12222221110
Q ss_pred c--ccccCchhhHHHHHhcCCCCccEEEEECCCCc
Q 008336 417 L--ALPFGDARKASLSRKFKVSGIPMLVAIGPSGR 449 (569)
Q Consensus 417 ~--~~~~~~d~~~~l~~~~~v~~~Pt~~lid~~G~ 449 (569)
. ......+....+++.++|+++||+++ .+|+
T Consensus 159 ~~~~~~~~v~~~~~l~~~~gV~gTPt~vi--~nG~ 191 (211)
T 1t3b_A 159 KEVKTPNIVKKHYELGIQFGVRGTPSIVT--STGE 191 (211)
T ss_dssp SSCCCSSHHHHHHHHHHHHTCCSSCEEEC--TTSC
T ss_pred ChHHHHHHHHHHHHHHHHcCCCcCCEEEE--eCCE
Confidence 0 01112245567889999999999988 4676
No 474
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.21 E-value=1e-05 Score=77.15 Aligned_cols=97 Identities=10% Similarity=0.117 Sum_probs=60.7
Q ss_pred eeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCC---CCH-------------HH-HHHHHH
Q 008336 30 QVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD---EDD-------------EA-FKGYFS 91 (569)
Q Consensus 30 ~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d---~~~-------------~~-~~~~~~ 91 (569)
.+.+..-.++ +|+.|+.+|||+|+++.+.+.++.+. +++.|+.+.+. ... .. |..+..
T Consensus 89 ~i~~G~~~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~----g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~ 164 (241)
T 1v58_A 89 WLLDGKKDAPVIVYVFADPFCPYCKQFWQQARPWVDS----GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEA 164 (241)
T ss_dssp CEEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHT----TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHH
T ss_pred CceECCCCCCeEEEEEECCCChhHHHHHHHHHHHHhC----CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHH
Confidence 3455555678 99999999999999999999887664 35777777653 111 11 111111
Q ss_pred hCC---CcccccC------CchhHHHHHHhcCCCCccEEEEECCCCcE
Q 008336 92 KMP---WLAVPFS------DSETRDKLDELFKVMGIPHLVILDENGKV 130 (569)
Q Consensus 92 ~~~---~~~~~~~------~~~~~~~l~~~~~v~~~P~~~lid~~G~i 130 (569)
.+. +...... .-+....+.+.+||+++|++++.+.+|++
T Consensus 165 ~~~~~~l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~ 212 (241)
T 1v58_A 165 SGGKLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTL 212 (241)
T ss_dssp TTTCCCCCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEE
T ss_pred HhccCCCCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCE
Confidence 111 0000000 11123467789999999999999878864
No 475
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.20 E-value=7.8e-06 Score=74.93 Aligned_cols=42 Identities=19% Similarity=0.252 Sum_probs=36.2
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD 80 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d 80 (569)
.++ +|+.||.+|||+|+.+.|.+.++.+++.+ ++.+..+.+.
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p~~ 66 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA--DVHFVRLPAL 66 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT--TEEEEEEECC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC--CeEEEEEehh
Confidence 578 99999999999999999999999998875 4777767663
No 476
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.17 E-value=4e-07 Score=88.40 Aligned_cols=72 Identities=18% Similarity=0.412 Sum_probs=49.5
Q ss_pred eeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHH
Q 008336 30 QVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDK 108 (569)
Q Consensus 30 ~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (569)
.+.+++.-++ .+++|||+|||||+++.|.+.+++++++ .|++|.... .+...+
T Consensus 189 ~~~la~~l~~~~vV~F~A~WC~~Ck~l~p~le~lA~~l~--------~Vd~d~~d~------------------~~~~~~ 242 (291)
T 3kp9_A 189 AVGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQVP--------YVECSPNGP------------------GTPQAQ 242 (291)
T ss_dssp HHHHHHHHHHTTCEEEECTTCHHHHHHHHHHGGGGGGSC--------EEESCSSCS------------------SSCCCH
T ss_pred HHHHHHHhCCCCEEEEECCCCHHHHHHHHHHHHHHHHcC--------EEEEeecCc------------------hhhHHH
Confidence 4455554555 7899999999999999999999876542 344441100 001136
Q ss_pred HHHhcCCCCccEEEEECCCCcE
Q 008336 109 LDELFKVMGIPHLVILDENGKV 130 (569)
Q Consensus 109 l~~~~~v~~~P~~~lid~~G~i 130 (569)
++++|+|+++||+++ +|+.
T Consensus 243 la~~~gI~~vPT~~i---~G~~ 261 (291)
T 3kp9_A 243 ECTEAGITSYPTWII---NGRT 261 (291)
T ss_dssp HHHTTTCCSTTEEEE---TTEE
T ss_pred HHHHcCCcccCeEEE---CCEE
Confidence 899999999999655 6753
No 477
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.16 E-value=4.5e-06 Score=89.13 Aligned_cols=66 Identities=18% Similarity=0.212 Sum_probs=56.8
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKV 115 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 115 (569)
.++ .++.||++|||+|+.+.|.+.+++..+. ++.+..|+++..+ +++..|+|
T Consensus 116 ~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~---~v~~~~vd~~~~~------------------------~~~~~~~i 168 (521)
T 1hyu_A 116 DGDFEFETYYSLSCHNCPDVVQALNLMAVLNP---RIKHTAIDGGTFQ------------------------NEITERNV 168 (521)
T ss_dssp CSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT---TEEEEEEETTTCH------------------------HHHHHTTC
T ss_pred CCCcceEEEECCCCcCcHHHHHHHHHHHhHcC---ceEEEEEechhhH------------------------HHHHHhCC
Confidence 466 8999999999999999999999988764 4889999988764 48899999
Q ss_pred CCccEEEEECCCCcEEE
Q 008336 116 MGIPHLVILDENGKVLS 132 (569)
Q Consensus 116 ~~~P~~~lid~~G~i~~ 132 (569)
+++|++++ +|+.+.
T Consensus 169 ~svPt~~i---~g~~~~ 182 (521)
T 1hyu_A 169 MGVPAVFV---NGKEFG 182 (521)
T ss_dssp CSSSEEEE---TTEEEE
T ss_pred CccCEEEE---CCEEEe
Confidence 99999977 787764
No 478
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.13 E-value=1.3e-05 Score=73.56 Aligned_cols=44 Identities=27% Similarity=0.386 Sum_probs=37.6
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR 402 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~ 402 (569)
.++++|+.||+.|||+|+++.|.+.++.+++.++ +.+..+.++.
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~~---v~~~~~p~~~ 66 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDD---MYLRTEHVVW 66 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCTT---EEEEEEECCC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCCC---eEEEEecCCC
Confidence 3799999999999999999999999988887654 7777777753
No 479
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.09 E-value=1.1e-05 Score=75.28 Aligned_cols=86 Identities=20% Similarity=0.198 Sum_probs=53.3
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCC---CH----------------HHHHHHHHhCCCc
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDE---DD----------------EAFKGYFSKMPWL 96 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~---~~----------------~~~~~~~~~~~~~ 96 (569)
.++ +++.||++|||+|+++.|.+.++.+ .+ +.+..+...- .. ..+.+++......
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~----~~-v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~ 159 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYND----LG-ITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPK 159 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHH----TT-EEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCS
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHh----CC-cEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCC
Confidence 567 9999999999999999999998654 23 6776654431 11 1122222222111
Q ss_pred ccc-cCCchhHHHHHHhcCCCCccEEEEECCCCc
Q 008336 97 AVP-FSDSETRDKLDELFKVMGIPHLVILDENGK 129 (569)
Q Consensus 97 ~~~-~~~~~~~~~l~~~~~v~~~P~~~lid~~G~ 129 (569)
... -..-+....+++.+||+++|++++ .+|+
T Consensus 160 ~~~~~~~v~~~~~l~~~~gV~gTPt~vi--~nG~ 191 (211)
T 1t3b_A 160 EVKTPNIVKKHYELGIQFGVRGTPSIVT--STGE 191 (211)
T ss_dssp SCCCSSHHHHHHHHHHHHTCCSSCEEEC--TTSC
T ss_pred hHHHHHHHHHHHHHHHHcCCCcCCEEEE--eCCE
Confidence 000 011123457889999999999887 4675
No 480
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=98.07 E-value=3.1e-05 Score=69.63 Aligned_cols=51 Identities=14% Similarity=0.292 Sum_probs=40.6
Q ss_pred eecccCCCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCC
Q 008336 350 VPVSDLAGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSD 401 (569)
Q Consensus 350 v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d 401 (569)
+.+....++++|+.|+..+||+|..+.+.+.++.+++.+. .++.+++....
T Consensus 20 ~~~G~~~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~-~~v~~~~~~~~ 70 (175)
T 1z6m_A 20 LHIGESNAPVKMIEFINVRCPYCRKWFEESEELLAQSVKS-GKVERIIKLFD 70 (175)
T ss_dssp EEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHT-TSEEEEEEECC
T ss_pred cccCCCCCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhC-CcEEEEEEeCC
Confidence 4455556899999999999999999999999988888322 24888887764
No 481
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.05 E-value=1.3e-05 Score=73.55 Aligned_cols=42 Identities=26% Similarity=0.357 Sum_probs=36.1
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD 80 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d 80 (569)
.++ +|+.||.+|||+|..+.|.+.++.++++. ++.+..+.+.
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p~~ 63 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS--DAYLRTEHVV 63 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT--TEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC--ceEEEEeccc
Confidence 578 99999999999999999999999998864 4778777763
No 482
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=98.01 E-value=5.6e-05 Score=67.98 Aligned_cols=52 Identities=15% Similarity=0.224 Sum_probs=42.9
Q ss_pred ceeecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCC
Q 008336 29 DQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD 80 (569)
Q Consensus 29 ~~v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d 80 (569)
..+.+.+..++ +|+.|+..|||+|+.+.|.+.++.++|.+.+++.++...+.
T Consensus 18 ~~~~~G~~~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 70 (175)
T 1z6m_A 18 TGLHIGESNAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLFD 70 (175)
T ss_dssp SSEEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCcccCCCCCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeCC
Confidence 34566777889 99999999999999999999999998854456888887764
No 483
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=97.99 E-value=1.1e-05 Score=62.44 Aligned_cols=59 Identities=15% Similarity=0.295 Sum_probs=41.3
Q ss_pred EEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCCCccE
Q 008336 361 LLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVSGIPM 440 (569)
Q Consensus 361 ll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~Pt 440 (569)
++.|+++|||+|++..+.|.++ ++.+..++++.+++. .+..+.+++.++|+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~---------~i~~~~vdi~~~~~~--------------------~~~~~~~g~~~vP~ 53 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR---------GFDFEMINVDRVPEA--------------------AEALRAQGFRQLPV 53 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT---------TCCCEEEETTTCHHH--------------------HHHHHHTTCCSSCE
T ss_pred EEEEcCCCChhHHHHHHHHHHC---------CCCeEEEECCCCHHH--------------------HHHHHHhCCCccCE
Confidence 5679999999999999887642 256677888866431 11223589999999
Q ss_pred EEEECCCCcEE
Q 008336 441 LVAIGPSGRTI 451 (569)
Q Consensus 441 ~~lid~~G~i~ 451 (569)
++ + +|+.+
T Consensus 54 ~~-~--~g~~~ 61 (81)
T 1h75_A 54 VI-A--GDLSW 61 (81)
T ss_dssp EE-E--TTEEE
T ss_pred EE-E--CCEEE
Confidence 84 4 46543
No 484
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=97.95 E-value=3.7e-05 Score=58.18 Aligned_cols=59 Identities=15% Similarity=0.231 Sum_probs=41.3
Q ss_pred EEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCCCccE
Q 008336 361 LLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVSGIPM 440 (569)
Q Consensus 361 ll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~Pt 440 (569)
++.|+++||++|++..+.|+++ ++.+..++++.+++. ...+ +.+++.++|+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~---------~i~~~~~di~~~~~~-------------------~~~~-~~~~~~~vP~ 53 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA---------GLAYNTVDISLDDEA-------------------RDYV-MALGYVQAPV 53 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT---------TCCCEEEETTTCHHH-------------------HHHH-HHTTCBCCCE
T ss_pred EEEEeCCCChHHHHHHHHHHHc---------CCCcEEEECCCCHHH-------------------HHHH-HHcCCCccCE
Confidence 5679999999999999987653 255666777765421 1122 4689999999
Q ss_pred EEEECCCCcEE
Q 008336 441 LVAIGPSGRTI 451 (569)
Q Consensus 441 ~~lid~~G~i~ 451 (569)
+++ +|+.+
T Consensus 54 l~~---~g~~~ 61 (75)
T 1r7h_A 54 VEV---DGEHW 61 (75)
T ss_dssp EEE---TTEEE
T ss_pred EEE---CCeEE
Confidence 873 56653
No 485
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=97.94 E-value=2.3e-05 Score=60.47 Aligned_cols=58 Identities=14% Similarity=0.202 Sum_probs=41.3
Q ss_pred EEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCCCCccE
Q 008336 41 GLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPH 120 (569)
Q Consensus 41 lv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P~ 120 (569)
++.||++|||+|++..+.|.+. + +.+..++++.+++. ....+.+++.++|+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~-------~-i~~~~vdi~~~~~~---------------------~~~~~~~g~~~vP~ 53 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR-------G-FDFEMINVDRVPEA---------------------AEALRAQGFRQLPV 53 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------T-CCCEEEETTTCHHH---------------------HHHHHHTTCCSSCE
T ss_pred EEEEcCCCChhHHHHHHHHHHC-------C-CCeEEEECCCCHHH---------------------HHHHHHhCCCccCE
Confidence 5779999999999998888752 2 66777888876541 11223589999999
Q ss_pred EEEECCCCcE
Q 008336 121 LVILDENGKV 130 (569)
Q Consensus 121 ~~lid~~G~i 130 (569)
++ + +|+.
T Consensus 54 ~~-~--~g~~ 60 (81)
T 1h75_A 54 VI-A--GDLS 60 (81)
T ss_dssp EE-E--TTEE
T ss_pred EE-E--CCEE
Confidence 84 4 4654
No 486
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=97.87 E-value=6e-05 Score=57.01 Aligned_cols=58 Identities=22% Similarity=0.311 Sum_probs=41.3
Q ss_pred EEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHhcCCCCccE
Q 008336 41 GLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPH 120 (569)
Q Consensus 41 lv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~P~ 120 (569)
++.|+++||++|++..+.|.++ + +.+..++++.+++. ...+ +.+++.++|+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~-i~~~~~di~~~~~~--------------------~~~~-~~~~~~~vP~ 53 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-------G-LAYNTVDISLDDEA--------------------RDYV-MALGYVQAPV 53 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------T-CCCEEEETTTCHHH--------------------HHHH-HHTTCBCCCE
T ss_pred EEEEeCCCChHHHHHHHHHHHc-------C-CCcEEEECCCCHHH--------------------HHHH-HHcCCCccCE
Confidence 5679999999999998888754 2 56677788765431 0122 4689999999
Q ss_pred EEEECCCCcE
Q 008336 121 LVILDENGKV 130 (569)
Q Consensus 121 ~~lid~~G~i 130 (569)
+++ +|+.
T Consensus 54 l~~---~g~~ 60 (75)
T 1r7h_A 54 VEV---DGEH 60 (75)
T ss_dssp EEE---TTEE
T ss_pred EEE---CCeE
Confidence 873 5654
No 487
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.84 E-value=7.3e-05 Score=68.31 Aligned_cols=41 Identities=20% Similarity=0.264 Sum_probs=35.4
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSG 79 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~ 79 (569)
.++ +|+.||.+|||+|..+.|.+.++.+++.. ++.+..+.+
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK--DVRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT--TEEEEEEEC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCC--ceEEEEeCc
Confidence 578 89999999999999999999999988753 477777765
No 488
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=97.83 E-value=6.4e-05 Score=68.87 Aligned_cols=42 Identities=21% Similarity=0.333 Sum_probs=36.7
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCC
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD 80 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d 80 (569)
.++ +|+.||+.|||+|+++.|.+.++.+++.+ ++.+..+.++
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~--~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD--DMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT--TEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC--CeEEEEecCC
Confidence 478 99999999999999999999999988875 4778777775
No 489
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.77 E-value=5.3e-05 Score=61.74 Aligned_cols=66 Identities=15% Similarity=0.266 Sum_probs=43.6
Q ss_pred EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCCH--HHHHHHHHhCCCcccccCCchhHHHHHHhcCCCC
Q 008336 40 IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDD--EAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMG 117 (569)
Q Consensus 40 vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~ 117 (569)
.++.|+++|||+|++..+.|.++...+. + +..++++.+. ... ...+.+.+++.+
T Consensus 13 ~v~~f~~~~C~~C~~~~~~L~~~~~~~~---~--~~~vdi~~~~~~~~~-------------------~~~l~~~~g~~~ 68 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKTQELLSQLPFKEG---L--LEFVDITATSDTNEI-------------------QDYLQQLTGART 68 (105)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHSCBCTT---S--EEEEEGGGSTTHHHH-------------------HHHHHHHHSCCC
T ss_pred CEEEEEcCCCHhHHHHHHHHHHcCCCCC---c--cEEEEccCCCCHHHH-------------------HHHHHHHhCCCC
Confidence 5677999999999999998886533321 2 4445655431 111 124777899999
Q ss_pred ccEEEEECCCCcEEE
Q 008336 118 IPHLVILDENGKVLS 132 (569)
Q Consensus 118 ~P~~~lid~~G~i~~ 132 (569)
+|+++ + +|+.+.
T Consensus 69 vP~i~-~--~g~~i~ 80 (105)
T 1kte_A 69 VPRVF-I--GKECIG 80 (105)
T ss_dssp SCEEE-E--TTEEEE
T ss_pred cCeEE-E--CCEEEe
Confidence 99974 4 576653
No 490
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.76 E-value=2.3e-05 Score=65.19 Aligned_cols=68 Identities=18% Similarity=0.227 Sum_probs=44.9
Q ss_pred CCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEE---EEEEeCCCCHHHHHHHHHhCCCcccccCCchhHHHHHHh
Q 008336 37 KGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFE---VIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDEL 112 (569)
Q Consensus 37 ~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~---vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 112 (569)
..+ .++.|+++|||+|++..+.|.++. +. +..++++.+++. ......+.+.
T Consensus 16 i~~~~vv~f~~~~Cp~C~~~~~~L~~~~--------~~~~~~~~vdi~~~~~~-----------------~~~~~~l~~~ 70 (114)
T 2hze_A 16 LANNKVTIFVKYTCPFCRNALDILNKFS--------FKRGAYEIVDIKEFKPE-----------------NELRDYFEQI 70 (114)
T ss_dssp CCTTCEEEEECTTCHHHHHHHHHHTTSC--------BCTTSEEEEEGGGSSSH-----------------HHHHHHHHHH
T ss_pred hccCCEEEEEeCCChhHHHHHHHHHHcC--------CCcCceEEEEccCCCCh-----------------HHHHHHHHHH
Confidence 344 677799999999999888776532 33 566666644200 0111357788
Q ss_pred cCCCCccEEEEECCCCcEEE
Q 008336 113 FKVMGIPHLVILDENGKVLS 132 (569)
Q Consensus 113 ~~v~~~P~~~lid~~G~i~~ 132 (569)
+++.++|++++ +|+.+.
T Consensus 71 ~g~~~vP~v~i---~g~~ig 87 (114)
T 2hze_A 71 TGGKTVPRIFF---GKTSIG 87 (114)
T ss_dssp HSCCSSCEEEE---TTEEEE
T ss_pred hCCCCcCEEEE---CCEEEe
Confidence 99999998754 576653
No 491
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=97.69 E-value=3.9e-05 Score=66.88 Aligned_cols=124 Identities=17% Similarity=0.142 Sum_probs=82.0
Q ss_pred CCceeecCCCceeeeccccCcEE-EEEEecCCcccchhhhHHHHHHHHHHhcCCCceEEEEeeccccHHHHHHHhcCCCc
Q 008336 178 SRDFVISSDGRKISVSDLEGKTI-GLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPW 256 (569)
Q Consensus 178 ~~d~~~~~~~~~~~~~~~~gk~v-~l~f~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ei~~v~~d~~~~~~~~~~~~~~~ 256 (569)
..+++...+.++...+...+..+ .++|....-+....+.+.+.+++++++++ ++|+.+|.+.+.
T Consensus 12 ~~PLV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgk-----i~Fv~vd~~~~~---------- 76 (147)
T 3bj5_A 12 QLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGK-----ILFAFIDSDHTD---------- 76 (147)
T ss_dssp ---CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTT-----CEEEEECTTCGG----------
T ss_pred cCCeeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCc-----eEEEEEecchHh----------
Confidence 44556555555544332233333 34455444444667888999999999876 677777763211
Q ss_pred ccccCCchhHHHHHhhcccCC--CceEEEECC--CC-CchhhhhHHHHHhhCCCCCCCChHHHHHHHHHHHHHHhhhhhh
Q 008336 257 LALPFKDKSREKLARYFELST--LPTLVIIGP--DG-KTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLE 331 (569)
Q Consensus 257 ~~~~~~d~~~~~l~~~f~v~~--~Ptlvi~~~--~g-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 331 (569)
..+++++||++. +|+++|++. ++ ++.. ..-.++.+.+.+|.....++...+.++
T Consensus 77 ---------~~~~l~~fGl~~~~~P~v~i~~~~~~~~Ky~~------------~~~~~t~~~i~~Fv~d~l~GkL~p~~K 135 (147)
T 3bj5_A 77 ---------NQRILEFFGLKKEECPAVRLITLEEEMTKYKP------------ESEELTAERITEFCHRFLEGKIKPHLM 135 (147)
T ss_dssp ---------GHHHHHHTTCCGGGCSEEEEEECSSSCEEECC------------SCCCCCHHHHHHHHHHHHTTCSCEEEC
T ss_pred ---------HHHHHHHcCCCcccCCEEEEEecccccccCCC------------CcccCCHHHHHHHHHHHHcCCcccccc
Confidence 456789999984 999999975 23 2221 112578999999999999999999999
Q ss_pred hhhccC
Q 008336 332 SVLVSG 337 (569)
Q Consensus 332 ~~~~~~ 337 (569)
|+.++.
T Consensus 136 SEpiPe 141 (147)
T 3bj5_A 136 SQELPE 141 (147)
T ss_dssp CSCCCG
T ss_pred CCCCCC
Confidence 987765
No 492
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.65 E-value=0.00011 Score=62.43 Aligned_cols=62 Identities=18% Similarity=0.291 Sum_probs=42.3
Q ss_pred EEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCC--HHHHHHHHHhCCCcccccCCchhHHHHHHhcCCCCc
Q 008336 41 GLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDED--DEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGI 118 (569)
Q Consensus 41 lv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~ 118 (569)
++.|+++|||+|++..+.|.++. +.+..+++|.+ ... ....+.+.+++.++
T Consensus 29 vvvf~~~~Cp~C~~~~~~L~~~~--------i~~~~vdid~~~~~~~-------------------~~~~l~~~~g~~~v 81 (130)
T 2cq9_A 29 VVIFSKTSCSYCTMAKKLFHDMN--------VNYKVVELDLLEYGNQ-------------------FQDALYKMTGERTV 81 (130)
T ss_dssp EEEEECSSCSHHHHHHHHHHHHT--------CCCEEEETTTSTTHHH-------------------HHHHHHHHHSSCCS
T ss_pred EEEEEcCCChHHHHHHHHHHHcC--------CCcEEEECcCCcCcHH-------------------HHHHHHHHhCCCCc
Confidence 34499999999999999888752 33455666644 111 11247788999999
Q ss_pred cEEEEECCCCcEEE
Q 008336 119 PHLVILDENGKVLS 132 (569)
Q Consensus 119 P~~~lid~~G~i~~ 132 (569)
|+++ + +|+.+.
T Consensus 82 P~l~-i--~G~~ig 92 (130)
T 2cq9_A 82 PRIF-V--NGTFIG 92 (130)
T ss_dssp SEEE-E--TTEEEE
T ss_pred CEEE-E--CCEEEc
Confidence 9985 4 576653
No 493
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.64 E-value=2.3e-05 Score=63.92 Aligned_cols=68 Identities=18% Similarity=0.219 Sum_probs=43.5
Q ss_pred EEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCCCccE
Q 008336 361 LLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVSGIPM 440 (569)
Q Consensus 361 ll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~Pt 440 (569)
++.|+++|||+|++..+.|.++...+ .+ +..+++|.+.+. ......+.+.+++.++|+
T Consensus 14 v~~f~~~~C~~C~~~~~~L~~~~~~~----~~--~~~vdi~~~~~~----------------~~~~~~l~~~~g~~~vP~ 71 (105)
T 1kte_A 14 VVVFIKPTCPFCRKTQELLSQLPFKE----GL--LEFVDITATSDT----------------NEIQDYLQQLTGARTVPR 71 (105)
T ss_dssp EEEEECSSCHHHHHHHHHHHHSCBCT----TS--EEEEEGGGSTTH----------------HHHHHHHHHHHSCCCSCE
T ss_pred EEEEEcCCCHhHHHHHHHHHHcCCCC----Cc--cEEEEccCCCCH----------------HHHHHHHHHHhCCCCcCe
Confidence 56699999999999999886543222 12 445566544200 001135777899999999
Q ss_pred EEEECCCCcEEEc
Q 008336 441 LVAIGPSGRTITK 453 (569)
Q Consensus 441 ~~lid~~G~i~~~ 453 (569)
++ + +|+.+..
T Consensus 72 i~-~--~g~~i~g 81 (105)
T 1kte_A 72 VF-I--GKECIGG 81 (105)
T ss_dssp EE-E--TTEEEES
T ss_pred EE-E--CCEEEec
Confidence 74 4 5777653
No 494
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.64 E-value=0.0003 Score=61.14 Aligned_cols=86 Identities=23% Similarity=0.353 Sum_probs=54.7
Q ss_pred CCCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCC---Chh----------------HHHHHHhcCCC
Q 008336 356 AGKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDR---DQT----------------SFDEFFKGMPW 416 (569)
Q Consensus 356 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~---~~~----------------~~~~~~~~~~~ 416 (569)
.++.+|+.|+.++||+|+++.+.|.++ .++.|+++..-. .+. .|..++..-..
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l--------~~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~ 84 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKM--------TDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKF 84 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTC--------CSEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhc--------CceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCC
Confidence 478999999999999999999987643 247777664321 111 12222221110
Q ss_pred c----ccccCchhhHHHHHhcCCCCccEEEEECCCCcEE
Q 008336 417 L----ALPFGDARKASLSRKFKVSGIPMLVAIGPSGRTI 451 (569)
Q Consensus 417 ~----~~~~~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~ 451 (569)
. ......+.+..+++.+||+++||+++ .+|+++
T Consensus 85 ~~~~~~~~~~v~~~~~la~~~gI~gtPt~vi--~nG~~i 121 (147)
T 3gv1_A 85 PVGGSICDNPVAETTSLGEQFGFNGTPTLVF--PNGRTQ 121 (147)
T ss_dssp CTTCCCCSCSHHHHHHHHHHTTCCSSCEEEC--TTSCEE
T ss_pred CCccHHHHHHHHHHHHHHHHhCCCccCEEEE--ECCEEe
Confidence 0 01112245678899999999999998 477753
No 495
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.60 E-value=5.9e-05 Score=62.63 Aligned_cols=67 Identities=13% Similarity=0.168 Sum_probs=44.8
Q ss_pred EEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeE---EEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCC
Q 008336 359 TILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLE---VVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKV 435 (569)
Q Consensus 359 ~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~---vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v 435 (569)
..++.|+++|||+|++..+.|.++. +. +..+++|.+++. ......+.+.+++
T Consensus 19 ~~vv~f~~~~Cp~C~~~~~~L~~~~---------~~~~~~~~vdi~~~~~~----------------~~~~~~l~~~~g~ 73 (114)
T 2hze_A 19 NKVTIFVKYTCPFCRNALDILNKFS---------FKRGAYEIVDIKEFKPE----------------NELRDYFEQITGG 73 (114)
T ss_dssp TCEEEEECTTCHHHHHHHHHHTTSC---------BCTTSEEEEEGGGSSSH----------------HHHHHHHHHHHSC
T ss_pred CCEEEEEeCCChhHHHHHHHHHHcC---------CCcCceEEEEccCCCCh----------------HHHHHHHHHHhCC
Confidence 3567799999999999998875421 33 556666654210 0112357788999
Q ss_pred CCccEEEEECCCCcEEEc
Q 008336 436 SGIPMLVAIGPSGRTITK 453 (569)
Q Consensus 436 ~~~Pt~~lid~~G~i~~~ 453 (569)
.++|++++ +|+.+..
T Consensus 74 ~~vP~v~i---~g~~igg 88 (114)
T 2hze_A 74 KTVPRIFF---GKTSIGG 88 (114)
T ss_dssp CSSCEEEE---TTEEEES
T ss_pred CCcCEEEE---CCEEEeC
Confidence 99998754 5877653
No 496
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.60 E-value=0.00025 Score=61.60 Aligned_cols=91 Identities=24% Similarity=0.298 Sum_probs=56.3
Q ss_pred eecCCCCCc-EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCC-----CCH--------------HHHHHHH
Q 008336 31 VKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGD-----EDD--------------EAFKGYF 90 (569)
Q Consensus 31 v~l~~~~gk-vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d-----~~~--------------~~~~~~~ 90 (569)
+.+..-.++ +|+.|+.++||+|+++.+.+.++ +++.|+.+..- .+. ..|.+++
T Consensus 7 i~~~~~~a~~~vv~f~D~~Cp~C~~~~~~l~~l-------~~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~ 79 (147)
T 3gv1_A 7 IKEVRGNGKLKVAVFSDPDCPFCKRLEHEFEKM-------TDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWM 79 (147)
T ss_dssp EEEEETTCCEEEEEEECTTCHHHHHHHHHHTTC-------CSEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHH
T ss_pred eeeecCCCCEEEEEEECCCChhHHHHHHHHhhc-------CceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHH
Confidence 444444678 99999999999999999987653 34777766432 111 1233333
Q ss_pred HhCCCcc-cc--cCCchhHHHHHHhcCCCCccEEEEECCCCcE
Q 008336 91 SKMPWLA-VP--FSDSETRDKLDELFKVMGIPHLVILDENGKV 130 (569)
Q Consensus 91 ~~~~~~~-~~--~~~~~~~~~l~~~~~v~~~P~~~lid~~G~i 130 (569)
....... .. -..-+....+++.+||+++|++++ .+|++
T Consensus 80 ~~g~~~~~~~~~~~~v~~~~~la~~~gI~gtPt~vi--~nG~~ 120 (147)
T 3gv1_A 80 RKGKFPVGGSICDNPVAETTSLGEQFGFNGTPTLVF--PNGRT 120 (147)
T ss_dssp HHCCCCTTCCCCSCSHHHHHHHHHHTTCCSSCEEEC--TTSCE
T ss_pred hCCCCCCccHHHHHHHHHHHHHHHHhCCCccCEEEE--ECCEE
Confidence 3221110 01 112234567889999999999988 46764
No 497
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.56 E-value=0.00041 Score=56.22 Aligned_cols=60 Identities=13% Similarity=0.276 Sum_probs=38.0
Q ss_pred EEEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCC-CHHHHHHHHHhCCCcccccCCchhHHHHHHhcCCCCc
Q 008336 40 IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDE-DDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGI 118 (569)
Q Consensus 40 vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~ 118 (569)
.++.|+++|||+|++..+.|.+.. +.+-.++++. +.+...++. ..+.+.++..++
T Consensus 23 ~v~ly~~~~Cp~C~~ak~~L~~~~--------i~y~~vdI~~~~~~~~~~~~----------------~~l~~~~g~~~v 78 (103)
T 3nzn_A 23 KVIMYGLSTCVWCKKTKKLLTDLG--------VDFDYVYVDRLEGKEEEEAV----------------EEVRRFNPSVSF 78 (103)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHT--------BCEEEEEGGGCCHHHHHHHH----------------HHHHHHCTTCCS
T ss_pred eEEEEcCCCCchHHHHHHHHHHcC--------CCcEEEEeeccCcccHHHHH----------------HHHHHhCCCCcc
Confidence 566699999999999998887651 3334445553 222111111 134456789999
Q ss_pred cEEEE
Q 008336 119 PHLVI 123 (569)
Q Consensus 119 P~~~l 123 (569)
|++++
T Consensus 79 P~l~i 83 (103)
T 3nzn_A 79 PTTII 83 (103)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 99776
No 498
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.55 E-value=0.00015 Score=63.01 Aligned_cols=62 Identities=19% Similarity=0.341 Sum_probs=41.6
Q ss_pred EEEEecCCCHhhHhhHHHHHHHHHHhcCCCCEEEEEEeCCCC--HHHHHHHHHhCCCcccccCCchhHHHHHHhcCCCCc
Q 008336 41 GLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDED--DEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGI 118 (569)
Q Consensus 41 lv~F~a~wC~~C~~~~p~l~~~~~~~~~~g~~~vv~v~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~ 118 (569)
++.|+++|||+|++..+.|.++. +.+..+++|.+ ...+ ...+.+.+++.++
T Consensus 51 Vvvf~~~~Cp~C~~~k~~L~~~~--------i~~~~vdId~~~~~~~~-------------------~~~L~~~~g~~tv 103 (146)
T 2ht9_A 51 VVIFSKTSCSYCTMAKKLFHDMN--------VNYKVVELDLLEYGNQF-------------------QDALYKMTGERTV 103 (146)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHT--------CCCEEEEGGGCTTHHHH-------------------HHHHHHHHSCCCS
T ss_pred EEEEECCCChhHHHHHHHHHHcC--------CCeEEEECccCcCCHHH-------------------HHHHHHHhCCCCc
Confidence 34499999999999999888752 23444555533 1111 1357788999999
Q ss_pred cEEEEECCCCcEEE
Q 008336 119 PHLVILDENGKVLS 132 (569)
Q Consensus 119 P~~~lid~~G~i~~ 132 (569)
|+++ + +|+.+.
T Consensus 104 P~if-i--~G~~ig 114 (146)
T 2ht9_A 104 PRIF-V--NGTFIG 114 (146)
T ss_dssp CEEE-E--TTEEEE
T ss_pred CeEE-E--CCEEEe
Confidence 9985 4 676653
No 499
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.55 E-value=0.00017 Score=61.31 Aligned_cols=63 Identities=16% Similarity=0.208 Sum_probs=42.0
Q ss_pred EEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeCCCChhHHHHHHhcCCCcccccCchhhHHHHHhcCCCCccEEE
Q 008336 363 YFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISSDRDQTSFDEFFKGMPWLALPFGDARKASLSRKFKVSGIPMLV 442 (569)
Q Consensus 363 ~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~ 442 (569)
.|+++|||+|++..+.|.++. +.+..+.+|.+.+. .....++.+.+++.++|+++
T Consensus 31 vf~~~~Cp~C~~~~~~L~~~~---------i~~~~vdid~~~~~----------------~~~~~~l~~~~g~~~vP~l~ 85 (130)
T 2cq9_A 31 IFSKTSCSYCTMAKKLFHDMN---------VNYKVVELDLLEYG----------------NQFQDALYKMTGERTVPRIF 85 (130)
T ss_dssp EEECSSCSHHHHHHHHHHHHT---------CCCEEEETTTSTTH----------------HHHHHHHHHHHSSCCSSEEE
T ss_pred EEEcCCChHHHHHHHHHHHcC---------CCcEEEECcCCcCc----------------HHHHHHHHHHhCCCCcCEEE
Confidence 399999999999999887641 33445666654110 01123577889999999985
Q ss_pred EECCCCcEEEc
Q 008336 443 AIGPSGRTITK 453 (569)
Q Consensus 443 lid~~G~i~~~ 453 (569)
+ +|+.+..
T Consensus 86 -i--~G~~igg 93 (130)
T 2cq9_A 86 -V--NGTFIGG 93 (130)
T ss_dssp -E--TTEEEEE
T ss_pred -E--CCEEEcC
Confidence 4 6777653
No 500
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.53 E-value=0.00032 Score=63.29 Aligned_cols=41 Identities=17% Similarity=0.398 Sum_probs=34.3
Q ss_pred CCEEEEEEecCCChhHHhhhHHHHHHHHHHhhcCCCeEEEEEeC
Q 008336 357 GKTILLYFSAHWCPPCRAFLPKLIDAYKKIKERNESLEVVFISS 400 (569)
Q Consensus 357 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~ 400 (569)
++++||.|+.-.||+|+++.+.+.++.+++.+. +.++.+..
T Consensus 21 ~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~---~~~~~~~~ 61 (184)
T 4dvc_A 21 SSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEG---AKFQKNHV 61 (184)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTT---CEEEEEEC
T ss_pred CCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCc---eEEEEEec
Confidence 688999999999999999999999988888654 56666554
Done!