Query 008341
Match_columns 569
No_of_seqs 179 out of 952
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 23:55:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008341.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008341hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nxc_A Mannosyl-oligosaccharid 100.0 3E-141 9E-146 1149.9 37.4 430 102-538 11-471 (478)
2 1x9d_A Endoplasmic reticulum m 100.0 7E-141 2E-145 1155.7 35.3 442 83-535 47-537 (538)
3 1hcu_A Alpha-1,2-mannosidase; 100.0 1E-139 4E-144 1142.7 31.5 421 102-536 6-496 (503)
4 2ri9_A Mannosyl-oligosaccharid 100.0 7E-139 3E-143 1130.7 33.6 411 108-533 2-474 (475)
5 1dl2_A Class I alpha-1,2-manno 100.0 1E-136 5E-141 1119.7 29.4 419 108-537 2-499 (511)
6 2gz6_A N-acetyl-D-glucosamine 98.3 1.4E-05 4.7E-10 83.4 16.9 275 177-475 54-342 (388)
7 2ahf_A Unsaturated glucuronyl 97.9 0.00029 1E-08 74.5 17.9 255 177-476 43-324 (377)
8 3gt5_A N-acetylglucosamine 2-e 97.8 0.0002 6.7E-09 75.8 15.0 303 150-475 12-348 (402)
9 1fp3_A N-acyl-D-glucosamine 2- 97.7 0.00071 2.4E-08 70.9 15.7 298 150-475 16-352 (402)
10 2zzr_A Unsaturated glucuronyl 97.6 0.00068 2.3E-08 72.2 14.2 252 177-476 69-349 (397)
11 2gz6_A N-acetyl-D-glucosamine 97.5 0.005 1.7E-07 63.9 18.9 250 201-474 13-275 (388)
12 3gt5_A N-acetylglucosamine 2-e 97.5 0.003 1E-07 66.6 17.2 245 246-506 55-319 (402)
13 2zbl_A Putative isomerase; N-a 97.3 0.0034 1.2E-07 66.7 16.0 277 177-475 52-354 (421)
14 1nc5_A Hypothetical protein YT 97.3 0.0085 2.9E-07 62.7 17.7 258 178-485 43-329 (373)
15 2ahf_A Unsaturated glucuronyl 97.2 0.0076 2.6E-07 63.7 16.0 221 176-411 88-323 (377)
16 3k7x_A LIN0763 protein; Q92DQ0 97.1 0.00033 1.1E-08 73.1 5.3 146 183-346 99-250 (349)
17 1nc5_A Hypothetical protein YT 97.1 0.0049 1.7E-07 64.6 13.6 217 182-416 93-323 (373)
18 3pmm_A Putative cytoplasmic pr 97.1 0.0084 2.9E-07 63.3 15.1 244 150-417 87-339 (382)
19 2zzr_A Unsaturated glucuronyl 96.9 0.0068 2.3E-07 64.5 13.2 217 177-411 115-348 (397)
20 3k7x_A LIN0763 protein; Q92DQ0 96.7 0.011 3.7E-07 61.7 12.4 245 181-475 51-304 (349)
21 1x9d_A Endoplasmic reticulum m 96.5 0.011 3.8E-07 65.1 11.4 181 261-473 85-271 (538)
22 1dl2_A Class I alpha-1,2-manno 96.1 0.026 9E-07 61.9 11.6 232 261-513 2-258 (511)
23 2zbl_A Putative isomerase; N-a 95.5 0.62 2.1E-05 49.1 19.0 252 197-475 13-291 (421)
24 2ri9_A Mannosyl-oligosaccharid 95.5 0.051 1.7E-06 59.1 10.5 168 150-325 253-450 (475)
25 1nxc_A Mannosyl-oligosaccharid 95.2 0.1 3.5E-06 56.7 11.6 219 264-512 20-253 (478)
26 1fp3_A N-acyl-D-glucosamine 2- 95.0 1.3 4.3E-05 46.0 19.0 247 202-474 20-285 (402)
27 1hcu_A Alpha-1,2-mannosidase; 94.6 0.044 1.5E-06 60.0 6.8 171 150-325 266-469 (503)
28 3k11_A Putative glycosyl hydro 94.2 0.28 9.5E-06 52.9 11.9 209 178-407 147-363 (445)
29 3pmm_A Putative cytoplasmic pr 92.0 3 0.0001 43.7 15.6 196 246-478 71-280 (382)
30 2v8i_A Pectate lyase; periplas 87.3 1.2 4.1E-05 48.0 7.8 100 197-296 2-116 (543)
31 3k11_A Putative glycosyl hydro 84.5 0.59 2E-05 50.3 3.9 254 181-485 87-374 (445)
32 1kwf_A Endoglucanase A; hydrol 84.5 3.8 0.00013 42.8 9.9 136 140-292 73-232 (363)
33 3e6u_A LANC-like protein 1; al 78.0 5.8 0.0002 41.8 8.7 115 185-325 240-355 (411)
34 1v5d_A Chitosanase; chitosan d 77.4 9.1 0.00031 40.2 9.9 132 150-291 94-248 (386)
35 1wzz_A Probable endoglucanase; 75.6 4.7 0.00016 41.6 7.0 146 139-296 58-224 (334)
36 1wu4_A Xylanase Y; (alpla/alph 74.4 14 0.00047 39.0 10.3 146 139-297 79-252 (396)
37 2v8i_A Pectate lyase; periplas 62.5 4.2 0.00014 43.9 3.2 99 172-285 369-468 (543)
38 3e6u_A LANC-like protein 1; al 61.4 1.6E+02 0.0054 30.7 20.5 276 155-484 54-342 (411)
39 2g0d_A Nisin biosynthesis prot 53.8 19 0.00064 37.2 6.4 110 194-325 225-345 (409)
40 3qxf_A Endoglucanase; cellulas 44.8 58 0.002 33.9 8.3 138 140-293 44-205 (355)
41 3ren_A Glycosyl hydrolase, fam 43.6 19 0.00064 37.5 4.4 67 442-509 119-185 (350)
42 1wzz_A Probable endoglucanase; 43.3 26 0.00087 36.0 5.4 94 378-479 114-210 (334)
43 3nnb_A Alginate lyase; structu 43.2 11 0.00039 39.6 2.7 62 213-277 75-136 (382)
44 1r76_A Pectate lyase; A-helica 41.7 77 0.0026 33.6 8.8 106 193-304 74-211 (408)
45 3eu8_A Putative glucoamylase; 41.7 59 0.002 34.7 7.9 75 215-297 40-121 (430)
46 3ren_A Glycosyl hydrolase, fam 36.1 1E+02 0.0035 32.0 8.5 133 150-297 78-224 (350)
47 1h12_A Endo-1,4-beta-xylanase; 34.9 74 0.0025 33.5 7.4 137 139-296 87-262 (405)
48 2g0d_A Nisin biosynthesis prot 34.9 23 0.0008 36.5 3.5 65 185-270 288-352 (409)
49 3h7l_A Endoglucanase; dehydrog 33.2 41 0.0014 37.4 5.2 86 182-275 309-395 (586)
50 2b4j_C PC4 and SFRS1 interacti 32.3 33 0.0011 29.3 3.4 48 439-486 49-96 (98)
51 1gxm_A Pectate lyase; mechanis 31.5 1.3E+02 0.0046 30.9 8.4 102 196-304 23-133 (332)
52 3qxf_A Endoglucanase; cellulas 30.1 69 0.0023 33.3 6.0 91 378-480 103-197 (355)
53 1wu4_A Xylanase Y; (alpla/alph 26.9 1.2E+02 0.0041 31.8 7.3 97 378-481 136-242 (396)
54 1kwf_A Endoglucanase A; hydrol 23.3 1.5E+02 0.0051 30.6 7.1 93 378-478 128-223 (363)
55 1h12_A Endo-1,4-beta-xylanase; 22.4 90 0.0031 32.9 5.3 88 378-478 152-245 (405)
56 1rh5_C Secbeta; protein transl 21.7 62 0.0021 24.6 2.8 44 1-44 1-46 (53)
No 1
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=100.00 E-value=2.7e-141 Score=1149.85 Aligned_cols=430 Identities=41% Similarity=0.772 Sum_probs=404.2
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHhHhhccCchhhhH-------------------------HHHhcCCCCCChhHHHHH
Q 008341 102 FAEDPIDIQRKQKVKDAMIHAWSSYEKYAWGQDELQL-------------------------LYSMCLFWRISDYSFSSE 156 (569)
Q Consensus 102 ~~~~~~~~~rr~~Vk~af~haw~~Y~~~Awg~DEL~P-------------------------L~IMgl~~~~~~eEF~~A 156 (569)
.+.++...+||++||+||+|||++|++||||||||+| |||||+ ++||++|
T Consensus 11 ~~~~~~~~~rr~~Vk~~F~haw~~Y~~~Awg~DEl~P~S~~g~~~~~fg~~~g~TlVDsLDTL~IMgl-----~~Ef~~A 85 (478)
T 1nxc_A 11 EPADATIREKRAKIKEMMTHAWNNYKRYAWGLNELKPISKEGHSSSLFGNIKGATIVDALDTLFIMGM-----KTEFQEA 85 (478)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEETTTTEEECCGGGTTCCCHHHHHHHHHHHHTTC-----HHHHHHH
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCcCCCccCCcccchheecccceeecCC-----HHHHHHH
Confidence 4457788899999999999999999999999999999 999999 9999999
Q ss_pred HHHHHhhcCCCCCccccccchhhhhccccceeeccCCChhHHHHHHHHHHHHhhcccCCCCCCcceeecCCCCCCCCCCC
Q 008341 157 FMWIANSLDFNKSYDASVFETTIRVVGGLLSAYDLSGDKVFLEKARDIADRLLPAWNTRTGIPYNVINLAHGNPHNPSWT 236 (569)
Q Consensus 157 ~~~V~~~ldF~~~~~vsvFEttIR~LGGLLSAY~LSgd~~lL~KA~eLadrLlpAFdTptGiP~~~iNl~~g~~~~~~~~ 236 (569)
++||+++++|+++..|||||||||+||||||||+||+|++||+||+||||+||||||||||||+++||+++|.+.++.|.
T Consensus 86 ~~~v~~~l~f~~~~~vsvFETtIR~LGGLLSAy~Lsgd~~lL~kA~dLad~LlpAFdTptgiP~~~vnl~~g~~~~~~~~ 165 (478)
T 1nxc_A 86 KSWIKKYLDFNVNAEVSVFEVNIRFVGGLLSAYYLSGEEIFRKKAVELGVKLLPAFHTPSGIPWALLNMKSGIGRNWPWA 165 (478)
T ss_dssp HHHHHHHCCCCCSSEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHGGGGCSSSSCCCSEEETTTCCEECCTTS
T ss_pred HHHHHhhcCccCCCccchhheehhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccccCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998877776
Q ss_pred C-CCccccccccchhhHHHHHHHhCCchHHHHHHHHHHHHhhcCCCCCCcceeecCCCCCCCCCeeeecccCchHHHHHH
Q 008341 237 G-GESILADSGTEQLELIALSQRTGDPKYRQKAEKVIVELNKTFPADGLLPIYISPDRGTPSYSTITFGAMGDSFYEYLL 315 (569)
Q Consensus 237 ~-~~s~lAe~GSl~LEF~~LS~lTGd~kY~~~a~~i~~~L~~~~~~~GL~p~~id~~tg~~~~~~~t~Ga~~DSyYEYLL 315 (569)
. +++++||+||++|||++|||+||||+|+++|+++++.|++..+.+||+|++||+.+|+|.+..+++||++|||||||+
T Consensus 166 ~~~~s~lAe~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~~l~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYLl 245 (478)
T 1nxc_A 166 SGGSSILAEFGTLHLEFMHLSHLSGDPVFAEKVMKIRTVLNKLDKPEGLYPNYLNPSSGQWGQHHVSVGGLGDSFYEYLL 245 (478)
T ss_dssp GGGCEEHHHHTTCHHHHHHHHHHHCCTHHHHHHHHHHHHHHHSCCGGGCCCSEECTTTCCBCSCEECSSTTTHHHHHHHH
T ss_pred CCCCcccccccchhhhHHHHHHHHCChHHHHHHHHHHHHHHhcCCCCCccccccCCCCCCccCceeeecCCCchHHHHHH
Confidence 3 478999999999999999999999999999999999999987789999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCcchHHHHHHHHHHHHHHhccccCCCCCeeeeccCCCcccccccccccccchhhhhhcCCCCCCCchHHH
Q 008341 316 KVWIQGNKTSAVKPYRDMWETSMKGLLSLVRRSTPSSFTYICEKNGDSLIDKMDELACFAPGMIALGSSGYGPGDSEKFL 395 (569)
Q Consensus 316 K~~iL~g~~~~~~~~~~my~~a~~~i~~ll~~~~~~~~~~v~~~~g~~~~~~m~hLsCF~pGmlaLGa~~~~~~~~~~~l 395 (569)
|+|+|+|+.+ +.|++||.+||++|++||.+..+++++|+++..++.+.++|+||+||+|||++||++..+....++++
T Consensus 246 K~~il~g~~d--~~~~~m~~~a~~~i~~~l~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~gG~~aLg~~~~~~~~~~~~l 323 (478)
T 1nxc_A 246 KAWLMSDKTD--LEAKKMYFDAVQAIETHLIRKSSGGLTYIAEWKGGLLEHKMGHLTCFAGGMFALGADGAPEARAQHYL 323 (478)
T ss_dssp HHHHHTTTCC--HHHHHHHHHHHHHHHHHTEEECTTSCEEECEEETTEEECEEETGGGGHHHHHHHTSTTSCTTCHHHHH
T ss_pred HHHHHcCCch--HHHHHHHHHHHHHHHHHhcccCCCCcEEEEeccCCcccccccchhhhhHHHHHhccccccccchHHHH
Confidence 9999999999 99999999999999998766667899999999888899999999999999999999887655678999
Q ss_pred HHHHHHHHHHHHhhccCCCCccceeEeecCCCc---cccccCCCCCchhHHHHHHHHHhhcCcchHHHHHHHHHHHHHHH
Q 008341 396 SLAEELAWTCYNFYQSTPTKLAGENYFFRDGQD---MSVGTSWNILRPETVESLFYLWRLTGNKTYKEWGWNIFQAFEKN 472 (569)
Q Consensus 396 ~lA~~L~~tC~~~y~~t~tGl~PE~~~f~~~~~---~~~~~~~y~LRPE~IESlfyLyR~TGD~~yre~gW~if~ai~k~ 472 (569)
++|++|++||+++|.++|||++||+|.|+.+.. ..+.+++|+||||+|||+|||||+||||+||||||+||++|+++
T Consensus 324 ~~a~~l~~tC~~~y~~~~tgl~PE~~~~~~~~~~~~~~~~~~~y~LRPE~iES~fylyR~TgD~~yre~gw~~f~ai~k~ 403 (478)
T 1nxc_A 324 ELGAEIARTCHESYNRTYVKLGPEAFRFDGGVEAIATRQNEKYYILRPEVIETYMYMWRLTHDPKYRTWAWEAVEALESH 403 (478)
T ss_dssp HHHHHHHHHHHHHHHTSSSSSCCSEEESSTTCSSBCCSGGGCCBCSCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCCCeEEEeccCcccccccccccccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999986532 34578899999999999999999999999999999999999999
Q ss_pred cccCcCccccccCCC--CCCCCCcchHHHHHHHHHHHHhcCCCCccCCCCeeeccCCCccccccCCCC
Q 008341 473 SRIESGYVGLKDVNT--GDKDNMMQSFFLAETLKYLYLLFSPTTVISLDEWVFNTEAHPLKIVTQHDG 538 (569)
Q Consensus 473 ~r~~~Gya~l~dV~~--~~~~D~meSFflaETLKYLYLLFsd~~~isLd~~VFnTEaHPl~i~~~~~~ 538 (569)
|||+|||++|+||+. +.++|+|||||||||||||||||||+++||||+||||||||||||......
T Consensus 404 ~r~~~G~a~i~dV~~~~~~~~D~meSF~laETLKYlYLLFsd~~~i~ld~~VFnTEAHPl~i~~~~~~ 471 (478)
T 1nxc_A 404 CRVNGGYSGLRDVYIARESYDDVQQSFFLAETLKYLYLIFSDDDLLPLEHWIFNTEAHPFPILREQKK 471 (478)
T ss_dssp TEETTEECCBSCTTSSSCCBCCCBCHHHHHTHHHHHHHHTSCTTSSCTTTEEECTTSCEEECCC----
T ss_pred hhcccccccccccCCCCCCcCCCCCchHHHHHHHHHHeeccCCccCCCCCeeecCCCCceecCCCCcc
Confidence 999999999999985 456999999999999999999999999999999999999999999876554
No 2
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=100.00 E-value=6.5e-141 Score=1155.69 Aligned_cols=442 Identities=41% Similarity=0.731 Sum_probs=394.2
Q ss_pred ccCccccccccCCCCCCCCC--C-----------CChhHHHHHHHHHHHHHHHHHHhHhhccCchhhhH-----------
Q 008341 83 VIGKIDHIKQAKQPPGNKAF--A-----------EDPIDIQRKQKVKDAMIHAWSSYEKYAWGQDELQL----------- 138 (569)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~--~-----------~~~~~~~rr~~Vk~af~haw~~Y~~~Awg~DEL~P----------- 138 (569)
.+|++++|+|+.+++..+.. + ....+.+||++||+||+|||++|++||||||||+|
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~Vk~~F~haW~~Y~~~Awg~DEL~PlS~~g~d~fg~ 126 (538)
T 1x9d_A 47 WRGAVIEPEQGTELPSRRAEVPTKPPLPPARTQGTPVHLNYRQKGVIDVFLHAWKGYRKFAWGHDELKPVSRSFSEWFGL 126 (538)
T ss_dssp -------------------------------------CCCHHHHHHHHHHHHHHHHHHHHCTTSSEEETTTTEEECSSSS
T ss_pred ccCcccccccccCCccccccccccCcccCCccccCCccHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCCCcccccCC
Confidence 37999999998887665421 0 11236689999999999999999999999999999
Q ss_pred ----------HHHhcCCCCCChhHHHHHHHHHHhhcCCCCCccccccchhhhhccccceeeccCCChhHHHHHHHHHHHH
Q 008341 139 ----------LYSMCLFWRISDYSFSSEFMWIANSLDFNKSYDASVFETTIRVVGGLLSAYDLSGDKVFLEKARDIADRL 208 (569)
Q Consensus 139 ----------L~IMgl~~~~~~eEF~~A~~~V~~~ldF~~~~~vsvFEttIR~LGGLLSAY~LSgd~~lL~KA~eLadrL 208 (569)
|||||+ ++||++|++||.++++|+++..|||||||||+||||||||+||+|++||+||+||||+|
T Consensus 127 g~TLVDSLDTL~IMgl-----~~EF~~A~~~V~~~~~f~~d~~VsvFETtIR~LGGLLSAy~Lsgd~~lL~kA~dLadrL 201 (538)
T 1x9d_A 127 GLTLIDALDTMWILGL-----RKEFEEARKWVSKKLHFEKDVDVNLFESTIRILGGLLSAYHLSGDSLFLRKAEDFGNRL 201 (538)
T ss_dssp CHHHHHHHHHHHHTTC-----HHHHHHHHHHHHHHCCCCSSCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred ceeeeeccceeeecCC-----HHHHHHHHHHHHHhcCCCCCceeehhheehhhhhhhhhHHHhcCCHHHHHHHHHHHHHH
Confidence 999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHHhCCchHHHHHHHHHHHHhhcC-CCCCCcce
Q 008341 209 LPAWNTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQRTGDPKYRQKAEKVIVELNKTF-PADGLLPI 287 (569)
Q Consensus 209 lpAFdTptGiP~~~iNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lTGd~kY~~~a~~i~~~L~~~~-~~~GL~p~ 287 (569)
|||||||||||+++||+++|.+.++.|.. .+++||+||++|||++||++||||+|+++|++|++.|++.. +.+||+|+
T Consensus 202 lpAFdTptgiP~~~vnl~~g~~~~~~~~~-~s~lAe~GSl~LEF~~LS~LTGd~~Y~~~a~r~~~~l~~~~~~~~GL~p~ 280 (538)
T 1x9d_A 202 MPAFRTPSKIPYSDVNIGTGVAHPPRWTS-DSTVAEVTSIQLEFRELSRLTGDKKFQEAVEKVTQHIHGLSGKKDGLVPM 280 (538)
T ss_dssp GGGGCSTTSCCCSEEETTTCCEECCTTCS-EEEHHHHHSSHHHHHHHHHHHCCTHHHHHHHHHHHHHHTCSCCBTTBCCS
T ss_pred HHhhcCCCCCCcceeeecccccCCCCcCC-CceeccccceeeeHHHHHHHhCCcHHHHHHHHHHHHHHhcccCCCCCcce
Confidence 99999999999999999999887777764 58999999999999999999999999999999999999977 78999999
Q ss_pred eecCCCCCCCCC-eeeecccCchHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHhcc-ccCCCCCeeeeccCCCccc
Q 008341 288 YISPDRGTPSYS-TITFGAMGDSFYEYLLKVWIQGNKTSAVKPYRDMWETSMKGLLSLVR-RSTPSSFTYICEKNGDSLI 365 (569)
Q Consensus 288 ~id~~tg~~~~~-~~t~Ga~~DSyYEYLLK~~iL~g~~~~~~~~~~my~~a~~~i~~ll~-~~~~~~~~~v~~~~g~~~~ 365 (569)
+||+++|+|+.. .+++||++|||||||+|+|+|+|+.+ +.|++||.+||++|++||. ++.+.+++|+++..++.+.
T Consensus 281 ~i~~~tG~~~~~~~~~lGa~~DS~YEYLlK~~il~g~~d--~~y~~my~~a~~~i~~~L~~~~~~~~~~~v~~~~~g~~~ 358 (538)
T 1x9d_A 281 FINTHSGLFTHLGVFTLGARADSYYEYLLKQWIQGGKQE--TQLLEDYVEAIEGVRTHLLRHSEPSKLTFVGELAHGRFS 358 (538)
T ss_dssp EEETTTCCEESTTEECSSTTTHHHHHHHHHHHHHTTSCC--HHHHHHHHHHHHHHHHHTEEECTTTCCEEECEEETTEEE
T ss_pred EEeCCCCCccCCcceeecCCccHHHHHHHHHHHHcCCch--HHHHHHHHHHHHHHHHHhccCCCCCCceEEEeccCCccC
Confidence 999999999988 99999999999999999999999999 9999999999999999764 4557889999999888899
Q ss_pred ccccccccccchhhhhhcCCCCCCCchHHHHHHHHHHHHHHHhhccCCCCccceeEeecCC-----Cc--cccccCCCCC
Q 008341 366 DKMDELACFAPGMIALGSSGYGPGDSEKFLSLAEELAWTCYNFYQSTPTKLAGENYFFRDG-----QD--MSVGTSWNIL 438 (569)
Q Consensus 366 ~~m~hLsCF~pGmlaLGa~~~~~~~~~~~l~lA~~L~~tC~~~y~~t~tGl~PE~~~f~~~-----~~--~~~~~~~y~L 438 (569)
++|+||+||+|||++||++... +++++++|++|++||+++|.+++||++||+|.|+.. ++ +.+.+++|+|
T Consensus 359 ~~~~hL~cF~gG~~aLgg~~~~---~~~~l~~a~~L~~tC~~~Y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~d~~y~L 435 (538)
T 1x9d_A 359 AKMDHLVCFLPGTLALGVYHGL---PASHMELAQELMETCYQMNRQMETGLSPEIVHFNLYPQPGRRDVEVKPADRHNLL 435 (538)
T ss_dssp CEEEGGGGHHHHHHHHHHHTTC---CHHHHHHHHHHHHHHHHHHHTSTTSCCCSEEECCSSCCTTCCSCBCCGGGCCBCC
T ss_pred cccchHhhhhhhHHHhcCcccC---cHHHHHHHHHHHHHHHHHHHhcccCCCceEEEeccCCCccccceeeeccCcccCC
Confidence 9999999999999999998654 578999999999999999999999999999999863 11 3457889999
Q ss_pred chhHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHcccCcC-ccccccCCC---CCCCCCcchHHHHHHHHHHHHhcCCC-
Q 008341 439 RPETVESLFYLWRLTGNKTYKEWGWNIFQAFEKNSRIESG-YVGLKDVNT---GDKDNMMQSFFLAETLKYLYLLFSPT- 513 (569)
Q Consensus 439 RPE~IESlfyLyR~TGD~~yre~gW~if~ai~k~~r~~~G-ya~l~dV~~---~~~~D~meSFflaETLKYLYLLFsd~- 513 (569)
|||+|||+|||||+||||+||||||+||++|+++|||+|| |++|+||++ +.++|+|||||||||||||||||||+
T Consensus 436 RPE~IES~fylyR~TgD~~yre~gw~~f~ai~k~~rt~~Ggya~i~dV~~~~~~~~~D~mESFfLAETLKYlYLLFsd~~ 515 (538)
T 1x9d_A 436 RPETVESLFYLYRVTGDRKYQDWGWEILQSFSRFTRVPSGGYSSINNVQDPQKPEPRDKMESFFLGETLKYLFLLFSDDP 515 (538)
T ss_dssp CCHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHTBCTTSCBCCBSCTTCSSCCCBCSCBCHHHHHTHHHHHHHHHCCC-
T ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcccccCCccccccccCCCCCCcCCCcccHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999999999999999999999 999999987 56799999999999999999999999
Q ss_pred CccCCCCeeeccCCCccccccC
Q 008341 514 TVISLDEWVFNTEAHPLKIVTQ 535 (569)
Q Consensus 514 ~~isLd~~VFnTEaHPl~i~~~ 535 (569)
+++|||+||||||||||||+..
T Consensus 516 ~~i~Ld~~VFNTEAHPl~i~~~ 537 (538)
T 1x9d_A 516 NLLSLDAYVFNTEAHPLPIWTP 537 (538)
T ss_dssp CCSCTTTEEECTTSCEEECC--
T ss_pred CcCcCCCeeecCCCccccCCCC
Confidence 9999999999999999999754
No 3
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=100.00 E-value=1.3e-139 Score=1142.66 Aligned_cols=421 Identities=30% Similarity=0.515 Sum_probs=390.7
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHhHhhccCchhhhH----------------------HHHhcCCCCCChhHHHHHHHH
Q 008341 102 FAEDPIDIQRKQKVKDAMIHAWSSYEKYAWGQDELQL----------------------LYSMCLFWRISDYSFSSEFMW 159 (569)
Q Consensus 102 ~~~~~~~~~rr~~Vk~af~haw~~Y~~~Awg~DEL~P----------------------L~IMgl~~~~~~eEF~~A~~~ 159 (569)
.+..+.+.+||++||+||+|||++|++||||||||+| |+|||+ ++||++|++|
T Consensus 6 ~~~~~~~~~rr~~Vk~~F~haw~~Y~~~Awg~DEL~PlS~~g~d~~gg~g~TlVDsLDTL~IMgl-----~~Ef~~A~~~ 80 (503)
T 1hcu_A 6 TKRGSPNPTRAAAVKAAFQTSWNAYHHFAFPHDDLHPVSNSFDDERNGWGSSAIDGLDTAILMGD-----ADIVNTILQY 80 (503)
T ss_dssp -CBCCCCHHHHHHHHHHHHHHHHHHHHHTTTSSEEETTTTEEECTTTTSCHHHHHHHHHHHHTTC-----HHHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHHhCCCccccccCcCCccCCCCCcceeehhhccchhhcCC-----HHHHHHHHHH
Confidence 3455678899999999999999999999999999999 999999 9999999999
Q ss_pred HHhhcCCCC----CccccccchhhhhccccceeeccCCCh------------hHHHHHHHHHHHHhhcccCCCCCCccee
Q 008341 160 IANSLDFNK----SYDASVFETTIRVVGGLLSAYDLSGDK------------VFLEKARDIADRLLPAWNTRTGIPYNVI 223 (569)
Q Consensus 160 V~~~ldF~~----~~~vsvFEttIR~LGGLLSAY~LSgd~------------~lL~KA~eLadrLlpAFdTptGiP~~~i 223 (569)
|. +++|++ +..|||||||||+||||||||+||+|+ +||+||+||||+||||||||||||+++|
T Consensus 81 v~-~l~f~~~~~~~~~VsvFETtIR~LGGLLSAy~Ls~~~~~~~~~~~~~~~~lL~kA~dLadrLlpAFdTptgiP~~~v 159 (503)
T 1hcu_A 81 VP-QINFTTTAVANQGSSVFETNIRYLGGLLSAYDLLRGPFSSLATNQTLVNSLLRQAQTLANGLKVAFTTPSGVPDPTV 159 (503)
T ss_dssp GG-GCCTTCCSSTTCCEEHHHHHHHHHHHHHHHHHHHHTTTGGGCCCHHHHHHHHHHHHHHHHHHGGGGCSSSSCCCSEE
T ss_pred HH-hCCCCcccccCCccchheeehhhHhHHHHHHHHccCccccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCccee
Confidence 97 599998 889999999999999999999999995 9999999999999999999999999999
Q ss_pred ecCCCCCCCCCCCCCCccccccccchhhHHHHHHHhCCchHHHHHHHHHHHHhhcC----CCCCCcceeecCCCCCCCCC
Q 008341 224 NLAHGNPHNPSWTGGESILADSGTEQLELIALSQRTGDPKYRQKAEKVIVELNKTF----PADGLLPIYISPDRGTPSYS 299 (569)
Q Consensus 224 Nl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lTGd~kY~~~a~~i~~~L~~~~----~~~GL~p~~id~~tg~~~~~ 299 (569)
|+++|.+ .|..+++++||+||++|||++||++||||+|+++|++|++.|++.. +.+||+|++||+++|+|.+.
T Consensus 160 nl~~~~~---~~~~~~~~~Ae~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~ 236 (503)
T 1hcu_A 160 FFNPTVR---RSGASSNNVAEIGSLVLEWTRLSDLTGNPQYAQLAQKGESYLLNPKGSPEAWPGLIGTFVSTSNGTFQDS 236 (503)
T ss_dssp ECSSSCE---ECCCSEEEHHHHTTSHHHHHHHHHHHSCTHHHHHHHHHHHHHHSCCBSCCSBTTBCCSEEETTTCCBCCC
T ss_pred ecccCCC---CCCCCccccccccceeeehHHHHHHhCChHHHHHHHHHHHHHHhhhcccCCCCCceeeEEeCCCCcccCC
Confidence 9998654 3444678999999999999999999999999999999999999954 37999999999999999999
Q ss_pred eeeecccCchHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHhcccc--CCCCCeeeeccCCCcccccccccccccch
Q 008341 300 TITFGAMGDSFYEYLLKVWIQGNKTSAVKPYRDMWETSMKGLLSLVRRS--TPSSFTYICEKNGDSLIDKMDELACFAPG 377 (569)
Q Consensus 300 ~~t~Ga~~DSyYEYLLK~~iL~g~~~~~~~~~~my~~a~~~i~~ll~~~--~~~~~~~v~~~~g~~~~~~m~hLsCF~pG 377 (569)
.+++||++|||||||+|+|+|+|+.+ +.|++||.+||++|++||.+. .+++++|+++.+++.+.++|+||+||+||
T Consensus 237 ~~~~Ga~~DS~YEYLlK~~il~g~~~--~~y~~m~~~a~~~i~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~G 314 (503)
T 1hcu_A 237 SGSWSGLMDSFYEYLIKMYLYDPVAF--AHYKDRWVLGADSTIGHLGSHPSTRKDLTFLSSYNGQSTSPNSGHLASFGGG 314 (503)
T ss_dssp EECSSTTTHHHHHHHHHHHHHCTTTT--HHHHHHHHHHHHHHHHHTEECBTTCTTCCEECEEETTEEESEEEGGGGGHHH
T ss_pred eeeecCCCccHHHHHHHHHHHcCCch--HHHHHHHHHHHHHHHHHhccCCCCCCCceEEEeccCCccccccchhhhhhhH
Confidence 99999999999999999999999998 899999999999999976543 35789999999999999999999999999
Q ss_pred hhhhhcCCCCCCCchHHHHHHHHHHHHHHHhhccCCCCccceeEeecCCC------------------ccccccCCCCCc
Q 008341 378 MIALGSSGYGPGDSEKFLSLAEELAWTCYNFYQSTPTKLAGENYFFRDGQ------------------DMSVGTSWNILR 439 (569)
Q Consensus 378 mlaLGa~~~~~~~~~~~l~lA~~L~~tC~~~y~~t~tGl~PE~~~f~~~~------------------~~~~~~~~y~LR 439 (569)
|++|||+..+ .++++++|++|++||+++|.++|||++||+|.|..+. ++.+.+++|+||
T Consensus 315 ~~aLgg~~~~---~~~~~~~a~~L~~tC~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~y~LR 391 (503)
T 1hcu_A 315 NFILGGILLN---EQKYIDFGIKLASSYFGTYTQTASGIGPEGFAWVDSVTGAGGSPPSSQSGFYSSAGFWVTAPYYILR 391 (503)
T ss_dssp HHHHHHHHHT---CHHHHHHHHHHHHHHHHHHHTSSSSCCCSEEECCBTTTCCSCCCCGGGHHHHHHHSCEEEECCBCCC
T ss_pred HHHhcCcccc---cHHHHHHHHHHHHHHHHHHHhCccCCCceEEEeecCccccccCCcccccccccCCCceeccccccCC
Confidence 9999997543 5789999999999999999999999999999997654 133456889999
Q ss_pred hhHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHcccCcCccccccCCC---CCCCCCcchHHHHHHHHHHHHhcCCCCcc
Q 008341 440 PETVESLFYLWRLTGNKTYKEWGWNIFQAFEKNSRIESGYVGLKDVNT---GDKDNMMQSFFLAETLKYLYLLFSPTTVI 516 (569)
Q Consensus 440 PE~IESlfyLyR~TGD~~yre~gW~if~ai~k~~r~~~Gya~l~dV~~---~~~~D~meSFflaETLKYLYLLFsd~~~i 516 (569)
||+|||+|||||+||||+||||||+||++|+++|||+|||++|+||++ +.++|+|||||||||||||||||||++++
T Consensus 392 PE~iES~fylyR~TgD~~yre~gw~if~ai~k~~r~~~Gya~i~dV~~~~~~~~~D~meSF~laETLKYlYLLFsd~~~i 471 (503)
T 1hcu_A 392 PETLESLYYAYRVTGDSKWQDLAWEALSAIEDACRAGSAYSSINDVTQANGGGASDDMESFWFAEALKYAYLIFAEESDV 471 (503)
T ss_dssp CHHHHHHHHHHHHHCBHHHHHHHHHHHHHHHHHHEETTEECCBSCTTSTTCSCBCSCBCHHHHHTHHHHHHHHHSCCCSS
T ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhccCCcccccccCCCCCCcCCccchHHHHHHHHHHheeccCCccc
Confidence 999999999999999999999999999999999999999999999987 66799999999999999999999999999
Q ss_pred CC-----CCeeeccCCCccccccCC
Q 008341 517 SL-----DEWVFNTEAHPLKIVTQH 536 (569)
Q Consensus 517 sL-----d~~VFnTEaHPl~i~~~~ 536 (569)
+| |+||||||||||||+...
T Consensus 472 ~L~~~~~d~~VFNTEAHPl~i~~~~ 496 (503)
T 1hcu_A 472 QVQATGGNKFVFNTEAHPFSIRSSS 496 (503)
T ss_dssp SCCTTSCCCEEECTTSCEEECCC--
T ss_pred ccccCCCCCeEEcCCCccccCCCcc
Confidence 99 999999999999998643
No 4
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=100.00 E-value=7.5e-139 Score=1130.68 Aligned_cols=411 Identities=33% Similarity=0.557 Sum_probs=385.8
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhccCchhhhH----------------------HHHhcCCCCCChhHHHHHHHHHHhhcC
Q 008341 108 DIQRKQKVKDAMIHAWSSYEKYAWGQDELQL----------------------LYSMCLFWRISDYSFSSEFMWIANSLD 165 (569)
Q Consensus 108 ~~~rr~~Vk~af~haw~~Y~~~Awg~DEL~P----------------------L~IMgl~~~~~~eEF~~A~~~V~~~ld 165 (569)
+.+||++||+||+|||++|++||||||||+| |+|||+ ++||++|++||. +++
T Consensus 2 ~~~r~~~Vk~~F~haw~~Y~~~Awg~DEl~PlS~~~~d~~gg~g~TlVDsLDTL~IMgl-----~~Ef~~a~~~v~-~~~ 75 (475)
T 2ri9_A 2 NQAKADAVKEAFQHAWNGYMKYAFPHDELTPVSNGHADSRNGWGASAVDALSTAVIMGK-----ADVVNAILEHVA-DID 75 (475)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTSSEEETTTTEEECTTTTSCHHHHHHHHHHHHHTC-----HHHHHHHHHHHH-HCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCccCCCCCcceeehhhccchhhcCC-----HHHHHHHHHHHH-hCC
Confidence 5689999999999999999999999999999 999999 999999999998 599
Q ss_pred CCC-CccccccchhhhhccccceeeccC-CC-----------hhHHHHHHHHHHHHhhcccCCCCCCcceeecCCCCCCC
Q 008341 166 FNK-SYDASVFETTIRVVGGLLSAYDLS-GD-----------KVFLEKARDIADRLLPAWNTRTGIPYNVINLAHGNPHN 232 (569)
Q Consensus 166 F~~-~~~vsvFEttIR~LGGLLSAY~LS-gd-----------~~lL~KA~eLadrLlpAFdTptGiP~~~iNl~~g~~~~ 232 (569)
|++ +..|||||||||+||||||||+|| +| ++||+||+||||+||||||||||||+++||+++|..
T Consensus 76 f~~~~~~vsvFETtIR~LGGLLSAy~Ls~g~~~~~~~~~~~~~~lL~kA~dLadrLlpAF~TptgiP~~~vnl~~~~~-- 153 (475)
T 2ri9_A 76 FSKTSDTVSLFETTIRYLAGMLSGYDLLQGPAKNLVDNQDLIDGLLDQSRNLADVLKFAFDTPSGVPYNNINITSHGN-- 153 (475)
T ss_dssp TTCCSSCEEHHHHHHHHHHHHHHHHHHHHTTTTTSCCCHHHHHHHHHHHHHHHHHHGGGGCSSSSCCCSEECTTTCCB--
T ss_pred CCcCCCccchhheehHhHhHHhHHHHhccCccccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCCceeecccCCC--
Confidence 999 999999999999999999999999 77 799999999999999999999999999999998643
Q ss_pred CCCCCCCccccccccchhhHHHHHHHhCCchHHHHHHHHHHHHhhcC-----CCCCCcceeecCCCCCCCCCeeeecccC
Q 008341 233 PSWTGGESILADSGTEQLELIALSQRTGDPKYRQKAEKVIVELNKTF-----PADGLLPIYISPDRGTPSYSTITFGAMG 307 (569)
Q Consensus 233 ~~~~~~~s~lAe~GSl~LEF~~LS~lTGd~kY~~~a~~i~~~L~~~~-----~~~GL~p~~id~~tg~~~~~~~t~Ga~~ 307 (569)
|..+++++||+||++|||++|||+||||+|+++|++|++.|++.+ +.+||+|++||+++|+|.+..+++||++
T Consensus 154 --~~~~~~~~Ae~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~~l~~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~ 231 (475)
T 2ri9_A 154 --DGATTNGLAVTGTLVLEWTRLSDLTGDEEYAKLSQKAESYLLKPQPSSSEPFPGLVGSSININDGQFADSRVSWNGGD 231 (475)
T ss_dssp --CCCSEEEHHHHHSCHHHHHHHHHHHSCTHHHHHHHHHHHHHHSCSSGGGCSBTTBCCSEEETTTCCBCCCCBCSSTTT
T ss_pred --cCCCccchhccccceeeHHHHHHHhCCHHHHHHHHHHHHHHHhhccccccCCCCCcceEEeCCCCcccCCceeecCCc
Confidence 334578999999999999999999999999999999999999865 4689999999999999999999999999
Q ss_pred chHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHhccccC--CCCCeeeeccCCCcccccccccccccchhhhhhcCC
Q 008341 308 DSFYEYLLKVWIQGNKTSAVKPYRDMWETSMKGLLSLVRRST--PSSFTYICEKNGDSLIDKMDELACFAPGMIALGSSG 385 (569)
Q Consensus 308 DSyYEYLLK~~iL~g~~~~~~~~~~my~~a~~~i~~ll~~~~--~~~~~~v~~~~g~~~~~~m~hLsCF~pGmlaLGa~~ 385 (569)
|||||||+|+|+|+|+.+ +.|++||.+||++|++||.+.+ +++++|+++..++.+.++|+||+||+|||++|||+.
T Consensus 232 DS~YEYLlK~~il~g~~~--~~~~~m~~~a~~~i~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~G~~aLgg~~ 309 (475)
T 2ri9_A 232 DSFYEYLIKMYVYDPKRF--ETYKDRWVLAAESTIKHLKSHPKSRPDLTFLSSYSNRNYDLSSQHLTCFDGGSFLLGGTV 309 (475)
T ss_dssp HHHHHHHHHHHHHCTTTT--HHHHHHHHHHHHHHHHHTEECCSSCTTCCEECEEETTEEECEEETGGGGHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHcCCch--HHHHHHHHHHHHHHHHHhccCCCCCCCceEEEeccCCccccccchHHHhHHHHHHhcccc
Confidence 999999999999999998 8999999999999999765443 578999999999999999999999999999999975
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhhccCCCCccceeEeecCCCc------------cccccCCCCCchhHHHHHHHHHhhc
Q 008341 386 YGPGDSEKFLSLAEELAWTCYNFYQSTPTKLAGENYFFRDGQD------------MSVGTSWNILRPETVESLFYLWRLT 453 (569)
Q Consensus 386 ~~~~~~~~~l~lA~~L~~tC~~~y~~t~tGl~PE~~~f~~~~~------------~~~~~~~y~LRPE~IESlfyLyR~T 453 (569)
.+ .++++++|++|++||+++|.++|||++||+|.|..+.. +.+.+++|+||||+|||+|||||+|
T Consensus 310 ~~---~~~~~~~a~~l~~tC~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~g~~~~~~~y~LRPE~iES~fylyR~T 386 (475)
T 2ri9_A 310 LD---RQDFIDFGLELVDGCEATYNSTLTKIGPDSWGWDPKKVPSDQKEFYEKAGFYISSGSYVLRPEVIESFYYAHRVT 386 (475)
T ss_dssp HT---CHHHHHHHHHHHHHHHHHHHTSSSSCCCSEEECCTTCCCGGGHHHHHHHSCEEEECCBCSCCHHHHHHHHHHHHH
T ss_pred cc---cHHHHHHHHHHHHHHHHHHHhcccCCCCcEEEeecCcccccccccccCCCceecccccCCChHHHHHHHHHHHHh
Confidence 43 57899999999999999999999999999999986532 2345689999999999999999999
Q ss_pred CcchHHHHHHHHHHHHHHHcccCcCccccccCCC---CCCCCCcchHHHHHHHHHHHHhcCCCCccCC-----CCeeecc
Q 008341 454 GNKTYKEWGWNIFQAFEKNSRIESGYVGLKDVNT---GDKDNMMQSFFLAETLKYLYLLFSPTTVISL-----DEWVFNT 525 (569)
Q Consensus 454 GD~~yre~gW~if~ai~k~~r~~~Gya~l~dV~~---~~~~D~meSFflaETLKYLYLLFsd~~~isL-----d~~VFnT 525 (569)
|||+||||||+||++|+++|||+|||++|+||++ +.++|+|||||||||||||||||||+++++| |+|||||
T Consensus 387 gD~~yr~~gw~~f~ai~k~~rt~~G~a~i~dV~~~~~~~~~D~meSF~laETLKYlYLLFsd~~~i~l~~~~~d~~VFNT 466 (475)
T 2ri9_A 387 GKEIYRDWVWNAFVAINSTCRTDSGFAAVSDVNKANGGSKYDNQESFLFAEVMKYSYLAHSEDAAWQVQKGGKNTFVYNT 466 (475)
T ss_dssp CCHHHHHHHHHHHHHHHHHTBCSSSBCCBSCTTSGGGSSBBSCCCTHHHHTHHHHHHHTTSCCCTTSCCSTTCCSEEECT
T ss_pred CCHHHHHHHHHHHHHHHHHHccccCCcccccccCCCCCCcCCccchHHHHHHHHHHHhcccCCcccccccCCCCCeEEcC
Confidence 9999999999999999999999999999999987 6779999999999999999999999999999 9999999
Q ss_pred CCCccccc
Q 008341 526 EAHPLKIV 533 (569)
Q Consensus 526 EaHPl~i~ 533 (569)
|||||||.
T Consensus 467 EAHPl~i~ 474 (475)
T 2ri9_A 467 EAHPISVA 474 (475)
T ss_dssp TSCEEECC
T ss_pred CCCCCCCC
Confidence 99999985
No 5
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=100.00 E-value=1.4e-136 Score=1119.67 Aligned_cols=419 Identities=40% Similarity=0.650 Sum_probs=388.8
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhccCchhhhH-------------------------HHHh---------cCCCCCChhHH
Q 008341 108 DIQRKQKVKDAMIHAWSSYEKYAWGQDELQL-------------------------LYSM---------CLFWRISDYSF 153 (569)
Q Consensus 108 ~~~rr~~Vk~af~haw~~Y~~~Awg~DEL~P-------------------------L~IM---------gl~~~~~~eEF 153 (569)
..+||++||+||+|||++|++||||||||+| |+|| |+ ++||
T Consensus 2 ~~~rr~~Vk~~F~haw~~Y~~~Awg~DEL~PlS~~g~~~~~~g~g~G~TlVDSLDTL~IM~~~~~~~~~gl-----~~Ef 76 (511)
T 1dl2_A 2 AGEMRDRIESMFLESWRDYSKHGWGYDVYGPIEHTSHNMPRGNQPLGWIIVDSVDTLMLMYNSSTLYKSEF-----EAEI 76 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTTCSEEETTTTEEECSSTTCCCCCTTHHHHHHHHHHHHHHCSSSHHHH-----HHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCcCCCCccCCccceeeeecccceEEeccccccccCCc-----HHHH
Confidence 4689999999999999999999999999998 9999 99 9999
Q ss_pred HHHHHHHHhhcCCCCCccccccchhhhhccccceeeccC------CChhHHHHHHHHHHHHhhccc-CCCCCCcceeecC
Q 008341 154 SSEFMWIANSLDFNKSYDASVFETTIRVVGGLLSAYDLS------GDKVFLEKARDIADRLLPAWN-TRTGIPYNVINLA 226 (569)
Q Consensus 154 ~~A~~~V~~~ldF~~~~~vsvFEttIR~LGGLLSAY~LS------gd~~lL~KA~eLadrLlpAFd-TptGiP~~~iNl~ 226 (569)
++|++||.++++|+++..|||||||||+||||||||+|| +|++||+||+||||||||||| ||||||+++||++
T Consensus 77 ~~A~~~V~~~l~F~~d~~VsvFETtIR~LGGLLSAy~Ls~~~~~~~d~~lL~kA~dLadrLlpAFd~TptgiP~~~vnl~ 156 (511)
T 1dl2_A 77 QRSEHWINDVLDFDIDAEVNVFETTIRMLGGLLSAYHLSDVLEVGNKTVYLNKAIDLGDRLALAFLSTQTGIPYSSINLH 156 (511)
T ss_dssp HHHHHHHHHTCCCCCSSEEEHHHHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHGGGGSSSSSCCCSEEETT
T ss_pred HHHHHHHHHhcCCCCCceechhheehhhhhhhhhHHHhcccccCCCcHHHHHHHHHHHHHHHHhhcCCCCCCCCceeecc
Confidence 999999999899999999999999999999999999999 999999999999999999999 9999999999999
Q ss_pred CCCCCCCCCCCCCccccccccchhhHHHHHHHhCCchHHHHHHHHHHHHhhcC----CCCCCcceeecCCCCCCCCCeee
Q 008341 227 HGNPHNPSWTGGESILADSGTEQLELIALSQRTGDPKYRQKAEKVIVELNKTF----PADGLLPIYISPDRGTPSYSTIT 302 (569)
Q Consensus 227 ~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lTGd~kY~~~a~~i~~~L~~~~----~~~GL~p~~id~~tg~~~~~~~t 302 (569)
+|.+..+.|.++.+++||+||++|||++|||+||||+|+++|++|++.|++.. +.+||+|++||+++|+|.+..++
T Consensus 157 ~g~~~~~~~~~~~s~~Ae~gSl~LEF~~LS~LTGd~~Y~~~a~r~~~~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~ 236 (511)
T 1dl2_A 157 SGQAVKNHADGGASSTAEFTTLQMEFKYLAYLTGNRTYWELVERVYEPLYKNNDLLNTYDGLVPIYTFPDTGKFGASTIR 236 (511)
T ss_dssp TCCEECCSSGGGCEEHHHHSSCHHHHHHHHHHHTCHHHHHHHHTTHHHHHHHHTHHHHHTTCCBSEECTTTCCBCSCCBC
T ss_pred cCCCCCCCCCCcccccccccceeeeHHHHHHHHCChHHHHHHHHHHHHHHhcccccCCCCCCcceEEcCCCCCccCCeee
Confidence 99988888887889999999999999999999999999999999999999966 67999999999999999999999
Q ss_pred ecccCchHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHhccc-cCCCCCeeeeccC---CCcccccccccccccchh
Q 008341 303 FGAMGDSFYEYLLKVWIQGNKTSAVKPYRDMWETSMKGLLSLVRR-STPSSFTYICEKN---GDSLIDKMDELACFAPGM 378 (569)
Q Consensus 303 ~Ga~~DSyYEYLLK~~iL~g~~~~~~~~~~my~~a~~~i~~ll~~-~~~~~~~~v~~~~---g~~~~~~m~hLsCF~pGm 378 (569)
+||++|||||||+|+|+|+ .+ +.|++||.+||++|++||.+ +.+.+++|+++.. ++.+.++|+||+||+|||
T Consensus 237 lGa~~DS~YEYLlK~~il~--~d--~~y~~m~~~a~~~i~~~L~~~~~~~~~~~~~~~~~~~~g~~~~~~~hL~cF~gG~ 312 (511)
T 1dl2_A 237 FGSRGDSFYEYLLKQYLLT--HE--TLYYDLYRKSMEGMKKHLLAQSKPSSLWYIGEREQGLHGQLSPKMDHLVCFMGGL 312 (511)
T ss_dssp SSTTTHHHHHHHHHHHHHH--CC--HHHHHHHHHHHHHHHHHTEEECTTTCCEEECBBTTCTTSCCBCEEEGGGGGHHHH
T ss_pred ecCCCCcHHHHHHHHHHhc--CC--HHHHHHHHHHHHHHHHHhccCCCCCCcEEEEEeecCCCCccccccchhhhchhHH
Confidence 9999999999999999999 45 78999999999999997654 4477899999873 677889999999999999
Q ss_pred hhhhcCCC-C-------CCCchHHHHHHHHHHHHHHHhhccCCCCccceeEeecCCC------------c--cccccCCC
Q 008341 379 IALGSSGY-G-------PGDSEKFLSLAEELAWTCYNFYQSTPTKLAGENYFFRDGQ------------D--MSVGTSWN 436 (569)
Q Consensus 379 laLGa~~~-~-------~~~~~~~l~lA~~L~~tC~~~y~~t~tGl~PE~~~f~~~~------------~--~~~~~~~y 436 (569)
++||+... + ....++++++|++|++||+++|.++|||++||+|.|.... + +.+.+++|
T Consensus 313 ~aLg~~~~~~~~~a~~~~~~~~~~~~~a~~l~~tC~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~d~~~~~~d~~y 392 (511)
T 1dl2_A 313 LASGSTEGLSIHEARRRPFFSKSDWDLAKGITDTCYQMYKQSSSGLAPEIVVFNDGNIKQDGWWRSSVGDFFVKPLDRHN 392 (511)
T ss_dssp HHHHHHTTCCHHHHTTSTTCCHHHHHHHHHHHHHHHHHHHTSTTSCCCSEEEECCSCCC-CCCEECSSSSEEECGGGCCB
T ss_pred HHhccccCCChhhhhhcccccHHHHHHHHHHHHHHHHHHhcCccCCCceEEEeecCCccccccccccccceeeccCCccc
Confidence 99999421 1 1123479999999999999999999999999999997532 1 34578999
Q ss_pred CCchhHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHcccCcC------ccccccCCCC--CCCCCcchHHHHHHHHHHHH
Q 008341 437 ILRPETVESLFYLWRLTGNKTYKEWGWNIFQAFEKNSRIESG------YVGLKDVNTG--DKDNMMQSFFLAETLKYLYL 508 (569)
Q Consensus 437 ~LRPE~IESlfyLyR~TGD~~yre~gW~if~ai~k~~r~~~G------ya~l~dV~~~--~~~D~meSFflaETLKYLYL 508 (569)
+||||+|||+|||||+||||+||||||+||++|+++|||+|| |++|+||++. .++|+|||||||||||||||
T Consensus 393 ~LRPE~iES~fylyR~TgD~~yre~gw~~f~ai~k~~rt~~G~~~~~gya~i~dV~~~~~~~~D~mESF~laETLKYlYL 472 (511)
T 1dl2_A 393 LQRPETVESIMFMYHLSHDHKYREWGAEIATSFFENTCVDCNDPKLRRFTSLSDCITLPTKKSNNMESFWLAETLKYLYI 472 (511)
T ss_dssp CCCCHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHEESTTCTTTCEECCEEESSSSSCEECSCCCHHHHHTHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhccccCCccccccccccccccCCCCcCCCcchhhHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999 9999999875 45999999999999999999
Q ss_pred hcCCCCccCCCCeeeccCCCccccccCCC
Q 008341 509 LFSPTTVISLDEWVFNTEAHPLKIVTQHD 537 (569)
Q Consensus 509 LFsd~~~isLd~~VFnTEaHPl~i~~~~~ 537 (569)
|||| ++|||+||||||||||||.+...
T Consensus 473 LFsd--~i~Ld~~VFNTEAHPl~i~~~~~ 499 (511)
T 1dl2_A 473 LFLD--EFDLTKVVFNTEAHPFPVLDEEI 499 (511)
T ss_dssp HTCS--CCCTTSEEECTTSCEEECCCHHH
T ss_pred Hccc--cccCCceeecCCCcceecCCCCc
Confidence 9999 99999999999999999976543
No 6
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=98.30 E-value=1.4e-05 Score=83.39 Aligned_cols=275 Identities=12% Similarity=0.034 Sum_probs=153.3
Q ss_pred hhhhhccccceeecc-CCChhHHHHHHHHHHHHhhcccCCCCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHH
Q 008341 177 TTIRVVGGLLSAYDL-SGDKVFLEKARDIADRLLPAWNTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIAL 255 (569)
Q Consensus 177 ttIR~LGGLLSAY~L-Sgd~~lL~KA~eLadrLlpAFdTptGiP~~~iNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~L 255 (569)
.+-|.|-.+.-||.. ++++.+++.|++.++.|+..+-.|.|--+..++ ..|.+... ...+-+-+-+.+-+..+
T Consensus 54 ~nar~i~~~a~a~~~~~~~~~~~~~A~~~~~~l~~~~~~~~Gg~~~~~d-~dg~~~~~-----~~~~~~~af~i~al~~~ 127 (388)
T 2gz6_A 54 LQNRQVWTFSMLCNQLEKRENWLKIARNGAKFLAQHGRDDEGNWYFALT-RGGEPLVQ-----PYNIFSDCFAAMAFSQY 127 (388)
T ss_dssp HHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHSBCTTSCBCSEEC-TTSCBCCC-----CCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCCCCCCEEEEEc-CCCCcccC-----CcchHHHHHHHHHHHHH
Confidence 778888889999998 899999999999999999986555664454444 23433221 12234455566778888
Q ss_pred HHHhCCchHHHHHHHHHHHHhhcC-CCCCCcceeecCCCCCCCCCeeeecccCchHHHHHHHHHHhcCCCCCcchHHHHH
Q 008341 256 SQRTGDPKYRQKAEKVIVELNKTF-PADGLLPIYISPDRGTPSYSTITFGAMGDSFYEYLLKVWIQGNKTSAVKPYRDMW 334 (569)
Q Consensus 256 S~lTGd~kY~~~a~~i~~~L~~~~-~~~GL~p~~id~~tg~~~~~~~t~Ga~~DSyYEYLLK~~iL~g~~~~~~~~~~my 334 (569)
.+.|||++|.+.|.++.+.|.+.. ...|++....+... .. -+..+.+ -.-+-|+..+-++|+ +.|++.=
T Consensus 128 y~~tg~~~~l~~A~~~~~~i~~~~~d~~g~~~~~~~~~~--~~---~~~~~~~-~~~~all~l~~~t~d----~~~~~~A 197 (388)
T 2gz6_A 128 ALASGEEWAKDVAMQAYNNVLRRKDNPKGKYTKTYPGTR--PM---KALAVPM-ILANLTLEMEWLLPQ----ETLENVL 197 (388)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHTC--------------CC--CC---EETHHHH-HHHHHHHHTGGGSCH----HHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHhcCCCcccCcccCCCC--CC---CCCCHHH-HHHHHHHHHHHHcCC----HHHHHHH
Confidence 999999999999999999998854 23465433322111 11 1111111 134667777777764 3466666
Q ss_pred HHHHHHHHHhccccCCCCCe--eeeccCCCcccccccccccccch-------hhhhhcCCCCCCCchHHHHHHHHHHHHH
Q 008341 335 ETSMKGLLSLVRRSTPSSFT--YICEKNGDSLIDKMDELACFAPG-------MIALGSSGYGPGDSEKFLSLAEELAWTC 405 (569)
Q Consensus 335 ~~a~~~i~~ll~~~~~~~~~--~v~~~~g~~~~~~m~hLsCF~pG-------mlaLGa~~~~~~~~~~~l~lA~~L~~tC 405 (569)
.+.++.+.+.+... +.+.. +........-....+ -.-|| +|.-.+... ..+++++.|+++.+.+
T Consensus 198 ~~~~~~~~~~~~~~-~~g~~~e~~~~~w~~~~~~~~~---~~~pgh~~e~a~lL~~~~~~t---gd~~~~~~A~~~~~~~ 270 (388)
T 2gz6_A 198 AATVQEVMGDFLDQ-EQGLMYENVAPDGSHIDCFEGR---LINPGHGIEAMWFIMDIARRK---NDSKTINQAVDVVLNI 270 (388)
T ss_dssp HHHHHHHHHTTEET-TTTEECSEECTTSCCCCSTTTT---EECHHHHHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcc-CCCeEEEEECCCCCCCCCcccC---cCCCCHHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHH
Confidence 66666665544332 22221 222211100000011 12334 122111111 2468999999999887
Q ss_pred HHhhccCCCCccceeEeecCCCccc---cccCCCCCchhHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHccc
Q 008341 406 YNFYQSTPTKLAGENYFFRDGQDMS---VGTSWNILRPETVESLFYLWRLTGNKTYKEWGWNIFQAFEKNSRI 475 (569)
Q Consensus 406 ~~~y~~t~tGl~PE~~~f~~~~~~~---~~~~~y~LRPE~IESlfyLyR~TGD~~yre~gW~if~ai~k~~r~ 475 (569)
.+.--...+|-.-..+.++ |+... ..++..----|.|=.+..+|++|||++|.+++-++++-+.++..-
T Consensus 271 ~~~g~d~~~Gg~~~~~~~~-g~~~~~~~~~~~~~W~qae~i~a~~~ly~~tgd~~yl~~a~~~~~~~~~~~~D 342 (388)
T 2gz6_A 271 LNFAWDNEYGGLYYFMDAA-GHPPQQLEWDQKLWWVHLESLVALAMGYRLTGRDACWAWYQKMHDYSWQHFAD 342 (388)
T ss_dssp HHHHBCTTTCSBCSCEETT-SCCCSCTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHBC
T ss_pred HHHhccCCCCCEEEeecCC-CCccccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCcC
Confidence 6432121123222222222 21100 011111111377778889999999999999999999988888754
No 7
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=97.92 E-value=0.00029 Score=74.49 Aligned_cols=255 Identities=16% Similarity=0.086 Sum_probs=151.5
Q ss_pred hhhhhccccceeeccCCChhHHHHHHHHHHHHhhcccCCCCCCcceeecCCCCCCCCCCCCCCccccccccch-hhHHHH
Q 008341 177 TTIRVVGGLLSAYDLSGDKVFLEKARDIADRLLPAWNTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQ-LELIAL 255 (569)
Q Consensus 177 ttIR~LGGLLSAY~LSgd~~lL~KA~eLadrLlpAFdTptGiP~~~iNl~~g~~~~~~~~~~~s~lAe~GSl~-LEF~~L 255 (569)
|.-=..|+|.-+|++|||+.+++.|++-.++|.+..+.... +...+.|-+. +=+..+
T Consensus 43 t~GF~~g~lw~~ye~Tgd~~~~~~a~~~~~~l~~~~~~~~~----------------------~~~HD~Gf~~~~s~~~~ 100 (377)
T 2ahf_A 43 TDGFWSGILWLCYEYTGDEQYREGAVRTVASFRERLDRFEN----------------------LDHHNIGFLYSLSAKAQ 100 (377)
T ss_dssp CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTTTTT----------------------CCBSTHHHHHHTTHHHH
T ss_pred CcchHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhcccC----------------------CCCCCchHhhHHHHHHH
Confidence 44556799999999999999999999999999876532211 1123455444 457789
Q ss_pred HHHhCCchHHHHHHHHHHHHhhcCCCC-CCcceeecCCCCCCCCCeeeecccCchHHHHHHHHHHhcCCCCCcchHHHHH
Q 008341 256 SQRTGDPKYRQKAEKVIVELNKTFPAD-GLLPIYISPDRGTPSYSTITFGAMGDSFYEYLLKVWIQGNKTSAVKPYRDMW 334 (569)
Q Consensus 256 S~lTGd~kY~~~a~~i~~~L~~~~~~~-GL~p~~id~~tg~~~~~~~t~Ga~~DSyYEYLLK~~iL~g~~~~~~~~~~my 334 (569)
-++|||++|.+.+.++-+.|..+.++. |.+... +...+.-....+-++.+-- -+-|.+.+.++|+.+ |.+.=
T Consensus 101 y~ltg~~~~~~~~~~aA~~L~~r~~~~~g~i~sw-~~~~~~~~~~~~iID~mmn--i~~L~~A~~~~gd~~----y~~~A 173 (377)
T 2ahf_A 101 WIVEKDESARKLALDAADVLMRRWRADAGIIQAW-GPKGDPENGGRIIIDCLLN--LPLLLWAGEQTGDPE----YRRVA 173 (377)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHTTEETTTTEECCB-SSTTCTTTTTEEEGGGGGG--HHHHHHHHHHHCCTH----HHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHhCCCCCCeEEec-cCCCCCCCCceEEechHHH--HHHHHHHHHHhCCHH----HHHHH
Confidence 999999999999999999999865543 665543 2211111112333433322 477889999999755 55555
Q ss_pred HHHHHHHHHhccccCCC-CCeeeeccCCCccccc------ccc------cccccchhhhhhcCCCCCCCchHHHHHHHHH
Q 008341 335 ETSMKGLLSLVRRSTPS-SFTYICEKNGDSLIDK------MDE------LACFAPGMIALGSSGYGPGDSEKFLSLAEEL 401 (569)
Q Consensus 335 ~~a~~~i~~ll~~~~~~-~~~~v~~~~g~~~~~~------m~h------LsCF~pGmlaLGa~~~~~~~~~~~l~lA~~L 401 (569)
.++.+-+.+++.+...+ ..++.-+...|...+. .+- .+.++=|.+.+=-. ...+++|+.|+++
T Consensus 174 ~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly~~----T~d~~yL~~A~~l 249 (377)
T 2ahf_A 174 EAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRY----LGNADLLETAKRM 249 (377)
T ss_dssp HHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHH----HTCHHHHHHHHHH
T ss_pred HHHHHHHHHhCcCCCCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHHHH----HCChHHHHHHHHH
Confidence 55555555544432111 1222211112222111 111 12222233322111 1257899999999
Q ss_pred HHHHHHhhccCCCCccceeEeecCCCccccccCCCCCch-------hHHHHHHHHHhhcC-----cchHHHHHHHHHHHH
Q 008341 402 AWTCYNFYQSTPTKLAGENYFFRDGQDMSVGTSWNILRP-------ETVESLFYLWRLTG-----NKTYKEWGWNIFQAF 469 (569)
Q Consensus 402 ~~tC~~~y~~t~tGl~PE~~~f~~~~~~~~~~~~y~LRP-------E~IESlfyLyR~TG-----D~~yre~gW~if~ai 469 (569)
++.+.+.. |....| .+++.... -+.|| =++-.+.-|.++|+ +++|++.|-++++++
T Consensus 250 a~~~l~~~---~~d~~p-ywd~~~~~--------~~~~~~d~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~l~~l 317 (377)
T 2ahf_A 250 ARHFLARV---PEDGVV-YWDFEVPQ--------EPSSYRDSSASAITACGLLEIASQLDESDPERQRFIDAAKTTVTAL 317 (377)
T ss_dssp HHHHHTTC---CTTSSC-BSBTTSCC--------CTTSCBCHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhh---HHhCCc-ccccCCCc--------cCCCccCCCHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHH
Confidence 88777654 322233 22222110 01222 13455777899996 889999999999999
Q ss_pred HHHcccC
Q 008341 470 EKNSRIE 476 (569)
Q Consensus 470 ~k~~r~~ 476 (569)
...+.+.
T Consensus 318 ~~~y~~~ 324 (377)
T 2ahf_A 318 RDGYAER 324 (377)
T ss_dssp HHHTBCC
T ss_pred HHHHhcC
Confidence 9988664
No 8
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=97.84 E-value=0.0002 Score=75.80 Aligned_cols=303 Identities=12% Similarity=0.060 Sum_probs=168.2
Q ss_pred hhHHHHHHHHH-HhhcC----C----CCCccc-cccc----hhhhhccccceeeccCCChhHHHHHHHHHHHHhhcccCC
Q 008341 150 DYSFSSEFMWI-ANSLD----F----NKSYDA-SVFE----TTIRVVGGLLSAYDLSGDKVFLEKARDIADRLLPAWNTR 215 (569)
Q Consensus 150 ~eEF~~A~~~V-~~~ld----F----~~~~~v-svFE----ttIR~LGGLLSAY~LSgd~~lL~KA~eLadrLlpAFdTp 215 (569)
..|.++++.+= ...+| | +.++.+ ..+| .+-|.|-++--||.+++++.+++.|++..+.|...+-.|
T Consensus 12 ~~~~~~~l~fw~~~~~D~~GGf~~~l~~dg~~~~~~~k~l~~n~r~i~~~a~a~~~~g~~~~l~~A~~~~~fl~~~~~d~ 91 (402)
T 3gt5_A 12 RTHISDTMAFYHPRCIDSAGGFFHYFRDDGSIYNATHRHLVSSTRFVFNYAMAYLQFGTAEYLDAVHHGLSYVRDVHRNP 91 (402)
T ss_dssp HHHHHHHHHHHTTTTBCTTSSBCCEECTTSCEEESSEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTBCT
T ss_pred HHHHHHHHHHHHhcCCCCCcCeeeEECCCCCCCCCCchhHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHhCccC
Confidence 56667777743 33344 1 223432 3343 467999999999999999999999999999998865445
Q ss_pred C-CCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHHhCCchHHHHHHHHHHHHhhcC--CCCCCcceeecCC
Q 008341 216 T-GIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQRTGDPKYRQKAEKVIVELNKTF--PADGLLPIYISPD 292 (569)
Q Consensus 216 t-GiP~~~iNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lTGd~kY~~~a~~i~~~L~~~~--~~~GL~p~~id~~ 292 (569)
. |--+..+ +.|.+.... ..+=.-.-+.+=+.. .+.|||+.|.+.|.++++.|.+.+ +..|++-...++.
T Consensus 92 ~~Gg~~~~~--~dG~~~~~~-----~~lyd~Af~i~al~~-~~~tgd~~~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~ 163 (402)
T 3gt5_A 92 ATGGYAWTL--CDDRVEDDT-----NHCYGLAFVMLAYSC-GLKVGIKQAREWMDETWCLLERHFWDAEYGLYKDEADAQ 163 (402)
T ss_dssp TTSCBCSEE--ETTEEEECC-----EEHHHHHHHHHHHHH-HHHTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTT
T ss_pred CCCcEEEEe--eCCCCCcCC-----cchHHHHHHHHHHHH-HHHhCChhHHHHHHHHHHHHHHHhcCCcCCCchhhhCCC
Confidence 4 4434333 555542111 111112222333444 456999999999999999998853 3457665444443
Q ss_pred CCCCCCCeeeecccC-chHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHhccccCCCC-Ceeeec-cCCCcccc-cc
Q 008341 293 RGTPSYSTITFGAMG-DSFYEYLLKVWIQGNKTSAVKPYRDMWETSMKGLLSLVRRSTPSS-FTYICE-KNGDSLID-KM 368 (569)
Q Consensus 293 tg~~~~~~~t~Ga~~-DSyYEYLLK~~iL~g~~~~~~~~~~my~~a~~~i~~ll~~~~~~~-~~~v~~-~~g~~~~~-~m 368 (569)
.. ... .. +.++ --.-|-++..+-++|+. .|.+.=.+.++.+.+.+....... ..++.. .+.. ... ..
T Consensus 164 ~~--~~~-~~-~~n~~m~l~eall~L~~~tgd~----~~~~~a~~l~~~~~~~f~~~~~g~l~e~~~~dw~~~-~~~~~~ 234 (402)
T 3gt5_A 164 WN--FTR-YR-GQNANMHMCEAMLAAYEASGEQ----RYLERALVLADRITRRQAAKADGLVWEHYDMRWEVD-WDYNRD 234 (402)
T ss_dssp CC--BCS-CE-EHHHHHHHHHHHHHHHHHHCCH----HHHHHHHHHHHHHHTHHHHTTTTSCCSEECTTSCBC-TTTTTT
T ss_pred CC--CCC-CC-CCCHHHHHHHHHHHHHHhhCCH----HHHHHHHHHHHHHHHHhhCccCCeeEEEECCCCCCc-cccccC
Confidence 11 111 11 1111 11468899999999864 356555556666554332221111 112211 1000 000 00
Q ss_pred ccccc-----ccchhhh--------hhcCCCCCCCchHHHHHHHHHHHHHHHhhccCCCCccceeEeecCCCccccccCC
Q 008341 369 DELAC-----FAPGMIA--------LGSSGYGPGDSEKFLSLAEELAWTCYNFYQSTPTKLAGENYFFRDGQDMSVGTSW 435 (569)
Q Consensus 369 ~hLsC-----F~pGmla--------LGa~~~~~~~~~~~l~lA~~L~~tC~~~y~~t~tGl~PE~~~f~~~~~~~~~~~~ 435 (569)
+.-.. +-||=.. ++.. . ..+.+++.|.+|.+.+.+.--....|..--.... +|+.......+
T Consensus 235 ~~~~~~~~~~~~pGH~iE~awlLl~~~~~-~---~~~~~~~~A~~l~~~~~~~gwd~~~Gg~~~~~d~-~g~~~~~~k~~ 309 (402)
T 3gt5_A 235 NPKHLFRPWGFQPGHQTEWAKLLLILDRY-I---EVEWLVPVARSLFDVAVARSWDAVRGGLCYGFAP-DGTICDDDKYF 309 (402)
T ss_dssp STTCSSSCSSBCHHHHHHHHHHHHHHHHH-C---CCTTHHHHHHHHHHHHHHHHBCTTTCSBCSEECT-TSCEEECCEEH
T ss_pred CcccccCcCCCCCChHHHHHHHHHHHHHh-h---CcHHHHHHHHHHHHHHHHhcccCCCCcEEEEEcC-CCCeeeCCcce
Confidence 00001 2334321 1111 1 1356999999999888654322222322111111 11111111122
Q ss_pred CCCchhHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHccc
Q 008341 436 NILRPETVESLFYLWRLTGNKTYKEWGWNIFQAFEKNSRI 475 (569)
Q Consensus 436 y~LRPE~IESlfyLyR~TGD~~yre~gW~if~ai~k~~r~ 475 (569)
+. --|.|=.+..||++|||++|.+|+-++++-+.++..-
T Consensus 310 W~-qaEal~a~l~ly~~tgd~~yl~~a~~~~~~~~~~~~D 348 (402)
T 3gt5_A 310 WV-QAESLAAAALLATRSGDERYWQWYDRLWAYAWQHMVD 348 (402)
T ss_dssp HH-HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBC
T ss_pred eH-HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCcC
Confidence 22 2478888899999999999999999999999888875
No 9
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=97.66 E-value=0.00071 Score=70.94 Aligned_cols=298 Identities=12% Similarity=0.060 Sum_probs=156.3
Q ss_pred hhHHHHHHHHHH-hhcC-----C----CCCccccccch----hhhhccccceeeccC---CChhHHHHHHHHHHHHhhcc
Q 008341 150 DYSFSSEFMWIA-NSLD-----F----NKSYDASVFET----TIRVVGGLLSAYDLS---GDKVFLEKARDIADRLLPAW 212 (569)
Q Consensus 150 ~eEF~~A~~~V~-~~ld-----F----~~~~~vsvFEt----tIR~LGGLLSAY~LS---gd~~lL~KA~eLadrLlpAF 212 (569)
.+|+++++.+.. ..+| | +.++.+.-+|- +-|.|=.+..||.+. +++.+|+.|+...+.|...+
T Consensus 16 ~~~~~~~l~~w~~~~~D~~~GGf~~~~~~dg~~~~~~k~l~~nar~l~~~a~a~~~~~~~~~~~~l~~A~~~~~fl~~~~ 95 (402)
T 1fp3_A 16 GQELDRVMAFWLEHSHDREHGGFFTCLGRDGRVYDDLKYVWLQGRQVWMYCRLYRKLERFHRPELLDAAKAGGEFLLRHA 95 (402)
T ss_dssp HHHHHHHHHHHHHHSBCTTTSSBCCCBCTTSCBSCCCEEHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhccCCCCCCCCEeeEECCCCCCCCCccchhhhHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHhc
Confidence 455566666554 2233 2 22333323444 556688888888876 99999999999999999985
Q ss_pred -cCCC--CCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHHhCCchHHHHHHHHHHHHhhcC--CCCCCcce
Q 008341 213 -NTRT--GIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQRTGDPKYRQKAEKVIVELNKTF--PADGLLPI 287 (569)
Q Consensus 213 -dTpt--GiP~~~iNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lTGd~kY~~~a~~i~~~L~~~~--~~~GL~p~ 287 (569)
|... |+- ..++ ..|.+... .-.+=+-+-+.+-+..+.+.|||+.|.+.|.++++.+.+.. ...|++.
T Consensus 96 ~d~~gg~g~~-~s~d-~dg~~~~~-----~~~lyd~af~~~a~~~~~~atgd~~~~~~A~~l~~~~~~~~~d~~~G~f~- 167 (402)
T 1fp3_A 96 RVAPPEKKCA-FVLT-RDGRPVKV-----QRSIFSECFYTMAMNELWRVTAEARYQSEAVDMMDQIVHWVREDPSGLGR- 167 (402)
T ss_dssp BSSTTSCCBC-SEEC-TTSCEEEC-----CSSSHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTCGGGGCC-
T ss_pred cCcCCCCceE-EEEC-CCCCcccc-----ccchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhccCCCcccC-
Confidence 5444 443 3443 33332210 11122233445668889999999999999999999888743 4457652
Q ss_pred eecCCCCCCCCCeeeecccCchHHHHHHH---HHHhcCCCCCcchHHHHHHHHHHHHHHhccccCCCCC--eeeeccCCC
Q 008341 288 YISPDRGTPSYSTITFGAMGDSFYEYLLK---VWIQGNKTSAVKPYRDMWETSMKGLLSLVRRSTPSSF--TYICEKNGD 362 (569)
Q Consensus 288 ~id~~tg~~~~~~~t~Ga~~DSyYEYLLK---~~iL~g~~~~~~~~~~my~~a~~~i~~ll~~~~~~~~--~~v~~~~g~ 362 (569)
.....+. ..-++++.. --.|-++. .+.+++ +.|.+.-.+.++.+.+. ... ..+. .+++.. ..
T Consensus 168 ---~~~~~~~-~~~~~~~~m-~~~~~~l~l~~l~~~~~-----~~~~~~a~~~~~~~~~~-~~~-~~~~~~e~~d~d-w~ 234 (402)
T 1fp3_A 168 ---PQLPGAV-ASESMAVPM-MLLCLVEQLGEEDEELA-----GRYAQLGHWCARRILQH-VQR-DGQAVLENVSED-GE 234 (402)
T ss_dssp ---CCCTTSC-CEEETHHHH-HHHHHHHHHHTTCHHHH-----HHTHHHHHHHHHHHHTT-EET-TTTEECSEEETT-SC
T ss_pred ---ccccCcc-CCCCcchHH-HHHHHHHHHHHHHHhcC-----cHHHHHHHHHHHHHHHH-hCc-CCCeEEEEECCC-CC
Confidence 1111121 111121110 11233444 223332 22444444444445444 221 1111 112110 00
Q ss_pred cccccccccccccch-------hhhhhcCCCCCCCchHHHHHHHHHHHHH-HH-hhccCCCCccceeEeecCCCccc-cc
Q 008341 363 SLIDKMDELACFAPG-------MIALGSSGYGPGDSEKFLSLAEELAWTC-YN-FYQSTPTKLAGENYFFRDGQDMS-VG 432 (569)
Q Consensus 363 ~~~~~m~hLsCF~pG-------mlaLGa~~~~~~~~~~~l~lA~~L~~tC-~~-~y~~t~tGl~PE~~~f~~~~~~~-~~ 432 (569)
......+. -.-|| +|+-.+...+ .+++++.|+++++.+ .+ .+.. .+|-.--...+ +|+... ..
T Consensus 235 ~~~~~~g~--~~~pgh~ie~~wlL~~a~~~~~---~~~~l~~A~~~~~~~~~~~~~d~-~~gg~~~~~~~-~g~~~~~l~ 307 (402)
T 1fp3_A 235 ELSGCLGR--HQNPGHALEAGWFLLRHSSRSG---DAKLRAHVIDTFLLLPFRSGWDA-DHGGLFYFQDA-DGLCPTQLE 307 (402)
T ss_dssp BCCHHHHH--EECHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHTHHHHHHHBCT-TTCSBCSCEET-TSCCCSSTT
T ss_pred ccCCCCCC--CCCCCcHHHHHHHHHHHHHHcC---ChHHHHHHHHHHHHHHHHHhccC-CCCCEEEeecC-CCCccccCc
Confidence 00000000 02233 2333333222 568999999999887 53 3332 12322211122 222100 00
Q ss_pred cCCCCCc--hhHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHccc
Q 008341 433 TSWNILR--PETVESLFYLWRLTGNKTYKEWGWNIFQAFEKNSRI 475 (569)
Q Consensus 433 ~~~y~LR--PE~IESlfyLyR~TGD~~yre~gW~if~ai~k~~r~ 475 (569)
+...... -|.|-.+..||++|||++|.+++-++++-+.++..-
T Consensus 308 d~~~~~W~qaea~~a~l~ly~~tgd~~yl~~a~~~~~~~~~~f~D 352 (402)
T 1fp3_A 308 WAMKLWWPHSEAMIAFLMGYSESGDPALLRLFYQVAEYTFRQFRD 352 (402)
T ss_dssp TTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBC
T ss_pred CCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCcC
Confidence 1111111 288999999999999999999999999999888864
No 10
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=97.58 E-value=0.00068 Score=72.19 Aligned_cols=252 Identities=15% Similarity=0.075 Sum_probs=149.2
Q ss_pred hhhhhccccceeeccCCChhHHHHHHHHHHHHhhcccCCCCCCcceeecCCCCCCCCCCCCCCccccccccch-hhHHHH
Q 008341 177 TTIRVVGGLLSAYDLSGDKVFLEKARDIADRLLPAWNTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQ-LELIAL 255 (569)
Q Consensus 177 ttIR~LGGLLSAY~LSgd~~lL~KA~eLadrLlpAFdTptGiP~~~iNl~~g~~~~~~~~~~~s~lAe~GSl~-LEF~~L 255 (569)
|.-=..|+|.-+|++|||+.+++.|++-.++|.+..... + .+...++|-+. +=+..+
T Consensus 69 t~GF~~G~lw~~ye~Tgd~~~~~~a~~~~~~l~~~~~~~-------~---------------~~~~HD~GF~~~~s~~~~ 126 (397)
T 2zzr_A 69 TNGFWTGCLWLAYEYNQDKKLKNIAHKNVLSFLNRINNR-------I---------------ALDHHDLGFLYTPSCTAE 126 (397)
T ss_dssp CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTT-------C---------------SCCSSTHHHHHTTTHHHH
T ss_pred CcchHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhhhc-------c---------------cCCCCCchHHHHHHHHHH
Confidence 444467999999999999999999999999988755321 1 11223445444 337889
Q ss_pred HHHhCCchHHHHHHHHHHHHhhcC-CCCCCcceeecCCCCCCCCCeeeecccCchHH--HHHHHHHHhcCCCCCcchHHH
Q 008341 256 SQRTGDPKYRQKAEKVIVELNKTF-PADGLLPIYISPDRGTPSYSTITFGAMGDSFY--EYLLKVWIQGNKTSAVKPYRD 332 (569)
Q Consensus 256 S~lTGd~kY~~~a~~i~~~L~~~~-~~~GL~p~~id~~tg~~~~~~~t~Ga~~DSyY--EYLLK~~iL~g~~~~~~~~~~ 332 (569)
-++|||++|.+.+.++.+.|..+. +..|.+... +...... ...+- .|.-. +-|.+.+.++|+.+ |.+
T Consensus 127 y~ltg~~~~~~~~~~aA~~L~~r~~~~~g~iqsw-~~~~~~~-~~~~i----ID~~mni~~L~~A~~~~gd~~----y~~ 196 (397)
T 2zzr_A 127 YRINGDVKALEATIKAADKLMERYQEKGGFIQAW-GELGYKE-HYRLI----IDCLLNIQLLFFAYEQTGDEK----YRQ 196 (397)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHTTEETTTTEECCS-SSTTCGG-GCEEE----TTHHHHTHHHHHHHHHHCCHH----HHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHhCcCCCEEEec-ccCCCCC-CCcee----echHhHHHHHHHHHHHhCCHH----HHH
Confidence 999999999999999999999865 344555543 2221111 11222 34433 56788888888654 555
Q ss_pred HHHHHHHHHHHhccccCCC-CCeeeeccCCCccc-----cccccc-------ccccchhhhhhcCCCCCCCchHHHHHHH
Q 008341 333 MWETSMKGLLSLVRRSTPS-SFTYICEKNGDSLI-----DKMDEL-------ACFAPGMIALGSSGYGPGDSEKFLSLAE 399 (569)
Q Consensus 333 my~~a~~~i~~ll~~~~~~-~~~~v~~~~g~~~~-----~~m~hL-------sCF~pGmlaLGa~~~~~~~~~~~l~lA~ 399 (569)
.=.++.+-+.+++.+...+ -.++.-+...|... .-...- +.++=|++.+=-.. ..+++|+.|+
T Consensus 197 ~A~~ha~~~l~~~~r~dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T----~d~~yL~~A~ 272 (397)
T 2zzr_A 197 VAVNHFYASANNVVRDDSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKM----KDYQQIILFK 272 (397)
T ss_dssp HHHHHHHHHHHHTBCTTSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHH----CCHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHH----CCHHHHHHHH
Confidence 5554555555544432111 11222111112221 111111 22223333321111 2578999999
Q ss_pred HHHHHHHHhhccCCCCccceeEeecCCCccccccCCCCCc---h----hHHHHHHHHHhhcCc---ch--HHHHHHHHHH
Q 008341 400 ELAWTCYNFYQSTPTKLAGENYFFRDGQDMSVGTSWNILR---P----ETVESLFYLWRLTGN---KT--YKEWGWNIFQ 467 (569)
Q Consensus 400 ~L~~tC~~~y~~t~tGl~PE~~~f~~~~~~~~~~~~y~LR---P----E~IESlfyLyR~TGD---~~--yre~gW~if~ 467 (569)
++++.+.+.. |....| .|++.... -+.| | =++..+.-|.++|++ ++ |++.|.++++
T Consensus 273 ~la~~~l~~~---~~d~~p-ywdt~~~~--------~~~~~~D~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~l~ 340 (397)
T 2zzr_A 273 GMTNYFLNRL---PEDKVS-YWDLIFTD--------GSGQPRDTSATATAVCGIHEMLKYLPEVDPDKETYKYAMHTMLR 340 (397)
T ss_dssp HHHHHHHHTC---CTTSCC-BSBTTCCT--------TSCCCBCHHHHHHHHHHHHHHHTTSCTTCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHhh---HHhCCc-cccCCCCC--------CCCCcCCCCHHHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHH
Confidence 9988777654 333333 22322211 0112 2 134557779999998 88 9999999999
Q ss_pred HHHHHcccC
Q 008341 468 AFEKNSRIE 476 (569)
Q Consensus 468 ai~k~~r~~ 476 (569)
++...+.+.
T Consensus 341 ~l~~~y~~~ 349 (397)
T 2zzr_A 341 SLIEQYSNN 349 (397)
T ss_dssp HHHHHTBCC
T ss_pred HHHHHHhcc
Confidence 999988654
No 11
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=97.48 E-value=0.005 Score=63.89 Aligned_cols=250 Identities=10% Similarity=0.099 Sum_probs=135.5
Q ss_pred HHHHHHHHhhcc-----cCCCCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHH-hCCchHHHHHHHHHHH
Q 008341 201 ARDIADRLLPAW-----NTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQR-TGDPKYRQKAEKVIVE 274 (569)
Q Consensus 201 A~eLadrLlpAF-----dTptGiP~~~iNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~l-TGd~kY~~~a~~i~~~ 274 (569)
..+|.+.+||-| |. .|=.+.+++.. |.. .+. +-.+=.-|-+..=|..+.+. ||||.|.+.|+++.+.
T Consensus 13 ~~~l~~~~l~fw~~~~~D~-~GGf~~~~~~d-~~~-~~~----eK~l~~nar~i~~~a~a~~~~~~~~~~~~~A~~~~~~ 85 (388)
T 2gz6_A 13 KNALLNDVLPFWENHSLDS-EGGYFTCLDRQ-GKV-YDT----DKFIWLQNRQVWTFSMLCNQLEKRENWLKIARNGAKF 85 (388)
T ss_dssp HHHHHHTHHHHHHHHCBCT-TSSBCCEEBTT-SCE-EEC----CEEHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHhcCCCC-CCCEEeEECCC-CCc-CCc----chhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 356677777755 65 66666666543 221 111 11222334444557777888 8999999999999999
Q ss_pred Hhhc-CCCCCCcceeecCCCCCCCCC-eeeecccCchHH-HHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHhccccCCC
Q 008341 275 LNKT-FPADGLLPIYISPDRGTPSYS-TITFGAMGDSFY-EYLLKVWIQGNKTSAVKPYRDMWETSMKGLLSLVRRSTPS 351 (569)
Q Consensus 275 L~~~-~~~~GL~p~~id~~tg~~~~~-~~t~Ga~~DSyY-EYLLK~~iL~g~~~~~~~~~~my~~a~~~i~~ll~~~~~~ 351 (569)
|.+. ...+|-+-..+|.++ ++... .... ...|. .=|+..|..+|+.+ |.+.=.+..+.|.+++.. +.
T Consensus 86 l~~~~~~~~Gg~~~~~d~dg-~~~~~~~~~~---~~af~i~al~~~y~~tg~~~----~l~~A~~~~~~i~~~~~d--~~ 155 (388)
T 2gz6_A 86 LAQHGRDDEGNWYFALTRGG-EPLVQPYNIF---SDCFAAMAFSQYALASGEEW----AKDVAMQAYNNVLRRKDN--PK 155 (388)
T ss_dssp HHHHSBCTTSCBCSEECTTS-CBCCCCCCHH---HHHHHHHHHHHHHHHHCCHH----HHHHHHHHHHHHHTC-------
T ss_pred HHHhcCCCCCCEEEEEcCCC-CcccCCcchH---HHHHHHHHHHHHHHHhCCHH----HHHHHHHHHHHHHHHhcC--CC
Confidence 9994 444555555666543 33211 1111 12222 12345667777643 555555555555554432 12
Q ss_pred CCeeeeccCCCcccccccccccccchhhhhhcCCCCCCCchHHHHHHHHHHHHHHHhhccCCCCccceeEeecCCCcccc
Q 008341 352 SFTYICEKNGDSLIDKMDELACFAPGMIALGSSGYGPGDSEKFLSLAEELAWTCYNFYQSTPTKLAGENYFFRDGQDMSV 431 (569)
Q Consensus 352 ~~~~v~~~~g~~~~~~m~hLsCF~pGmlaLGa~~~~~~~~~~~l~lA~~L~~tC~~~y~~t~tGl~PE~~~f~~~~~~~~ 431 (569)
++ +.....+......++.-+..+-+++.|.... ..+++++.|+++++.+...+...+.|..+|.+.=+. +.. .
T Consensus 156 g~-~~~~~~~~~~~~~~~~~~~~~~all~l~~~t----~d~~~~~~A~~~~~~~~~~~~~~~~g~~~e~~~~~w-~~~-~ 228 (388)
T 2gz6_A 156 GK-YTKTYPGTRPMKALAVPMILANLTLEMEWLL----PQETLENVLAATVQEVMGDFLDQEQGLMYENVAPDG-SHI-D 228 (388)
T ss_dssp ----------CCCCEETHHHHHHHHHHHHTGGGS----CHHHHHHHHHHHHHHHHHTTEETTTTEECSEECTTS-CCC-C
T ss_pred cc-cCcccCCCCCCCCCCHHHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCCC-CCC-C
Confidence 22 1111111111111222223344556655432 246899999999999988777767787777664221 110 0
Q ss_pred ccCCCCCch-hHHHH---HHHHHhhcCcchHHHHHHHHHHHHHHHcc
Q 008341 432 GTSWNILRP-ETVES---LFYLWRLTGNKTYKEWGWNIFQAFEKNSR 474 (569)
Q Consensus 432 ~~~~y~LRP-E~IES---lfyLyR~TGD~~yre~gW~if~ai~k~~r 474 (569)
.......-| ..+|. ++-++++|||++|++.|-++++.+.++.-
T Consensus 229 ~~~~~~~~pgh~~e~a~lL~~~~~~tgd~~~~~~A~~~~~~~~~~g~ 275 (388)
T 2gz6_A 229 CFEGRLINPGHGIEAMWFIMDIARRKNDSKTINQAVDVVLNILNFAW 275 (388)
T ss_dssp STTTTEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHB
T ss_pred CcccCcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhc
Confidence 010111223 24554 55556679999999999999999876543
No 12
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=97.46 E-value=0.003 Score=66.64 Aligned_cols=245 Identities=13% Similarity=0.024 Sum_probs=130.9
Q ss_pred ccchhhHHHHHHHhCCchHHHHHHHHHHHHhhc-CCC--CCCcceeecCCCCCCCCCeeeecccCchHHHHHHHHHHhcC
Q 008341 246 GTEQLELIALSQRTGDPKYRQKAEKVIVELNKT-FPA--DGLLPIYISPDRGTPSYSTITFGAMGDSFYEYLLKVWIQGN 322 (569)
Q Consensus 246 GSl~LEF~~LS~lTGd~kY~~~a~~i~~~L~~~-~~~--~GL~p~~id~~tg~~~~~~~t~Ga~~DSyYEYLLK~~iL~g 322 (569)
|-+.-=|....++||+|.|.++|+++.+.|.+. ... .|++-. + ..|++...... .....|.=+-+-.|..+|
T Consensus 55 ~r~i~~~a~a~~~~g~~~~l~~A~~~~~fl~~~~~d~~~Gg~~~~-~--~dG~~~~~~~~--lyd~Af~i~al~~~~~tg 129 (402)
T 3gt5_A 55 TRFVFNYAMAYLQFGTAEYLDAVHHGLSYVRDVHRNPATGGYAWT-L--CDDRVEDDTNH--CYGLAFVMLAYSCGLKVG 129 (402)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTBCTTTSCBCSE-E--ETTEEEECCEE--HHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHhCccCCCCcEEEE-e--eCCCCCcCCcc--hHHHHHHHHHHHHHHHhC
Confidence 444455677778899999999999999999883 222 244433 3 34443211100 111223322233355677
Q ss_pred CCCCcchHHHHHHHHHHHHHHhccccCCCCCeeeeccCC-Cccc--ccccccccccchhhhhhcCCCCCCCchHHHHHHH
Q 008341 323 KTSAVKPYRDMWETSMKGLLSLVRRSTPSSFTYICEKNG-DSLI--DKMDELACFAPGMIALGSSGYGPGDSEKFLSLAE 399 (569)
Q Consensus 323 ~~~~~~~~~~my~~a~~~i~~ll~~~~~~~~~~v~~~~g-~~~~--~~m~hLsCF~pGmlaLGa~~~~~~~~~~~l~lA~ 399 (569)
+.+ +.+.=.+.++.|.+++..... +. |...... ..+. +.+..-...+-+++.|.... ..+++++.|+
T Consensus 130 d~~----~l~~A~~l~~~i~~~f~d~~~-G~-~~~~~~~~~~~~~~~~~n~~m~l~eall~L~~~t----gd~~~~~~a~ 199 (402)
T 3gt5_A 130 IKQ----AREWMDETWCLLERHFWDAEY-GL-YKDEADAQWNFTRYRGQNANMHMCEAMLAAYEAS----GEQRYLERAL 199 (402)
T ss_dssp CTT----HHHHHHHHHHHHHHHTEETTT-TE-ECCEECTTCCBCSCEEHHHHHHHHHHHHHHHHHH----CCHHHHHHHH
T ss_pred Chh----HHHHHHHHHHHHHHHhcCCcC-CC-chhhhCCCCCCCCCCCCCHHHHHHHHHHHHHHhh----CCHHHHHHHH
Confidence 655 566666666677666543222 22 2211111 0111 11111111122344444322 2468999999
Q ss_pred HHHHHHHHhhccCCCCccceeEeecCCCc---cccccCCCCCch------hHHHHHHHHHhh---cCcchHHHHHHHHHH
Q 008341 400 ELAWTCYNFYQSTPTKLAGENYFFRDGQD---MSVGTSWNILRP------ETVESLFYLWRL---TGNKTYKEWGWNIFQ 467 (569)
Q Consensus 400 ~L~~tC~~~y~~t~tGl~PE~~~f~~~~~---~~~~~~~y~LRP------E~IESlfyLyR~---TGD~~yre~gW~if~ 467 (569)
++++.+..-.....+|..+|.|+-+ ++. .+..++.++.|| -.||..+.|.++ |||++|.+.|-++++
T Consensus 200 ~l~~~~~~~f~~~~~g~l~e~~~~d-w~~~~~~~~~~~~~~~~~~~~~pGH~iE~awlLl~~~~~~~~~~~~~~A~~l~~ 278 (402)
T 3gt5_A 200 VLADRITRRQAAKADGLVWEHYDMR-WEVDWDYNRDNPKHLFRPWGFQPGHQTEWAKLLLILDRYIEVEWLVPVARSLFD 278 (402)
T ss_dssp HHHHHHHTHHHHTTTTSCCSEECTT-SCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHCCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHhhCccCCeeEEEECCC-CCCccccccCCcccccCcCCCCCChHHHHHHHHHHHHHhhCcHHHHHHHHHHHH
Confidence 9998877544445679999998622 211 012233344444 478887776555 999999999999999
Q ss_pred HHHHHcccC--cCccccccCCCCCCCCCcchHHHHHHHHHH
Q 008341 468 AFEKNSRIE--SGYVGLKDVNTGDKDNMMQSFFLAETLKYL 506 (569)
Q Consensus 468 ai~k~~r~~--~Gya~l~dV~~~~~~D~meSFflaETLKYL 506 (569)
...++.--+ .|+.--.|......++...-..-+|.++=+
T Consensus 279 ~~~~~gwd~~~Gg~~~~~d~~g~~~~~~k~~W~qaEal~a~ 319 (402)
T 3gt5_A 279 VAVARSWDAVRGGLCYGFAPDGTICDDDKYFWVQAESLAAA 319 (402)
T ss_dssp HHHHHHBCTTTCSBCSEECTTSCEEECCEEHHHHHHHHHHH
T ss_pred HHHHhcccCCCCcEEEEEcCCCCeeeCCcceeHHHHHHHHH
Confidence 887765432 343322233221112333333446666643
No 13
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=97.35 E-value=0.0034 Score=66.68 Aligned_cols=277 Identities=14% Similarity=0.032 Sum_probs=156.5
Q ss_pred hhhhhccccceeeccCCChhHHHHHHHHHHHHhhcccCC--CCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHH
Q 008341 177 TTIRVVGGLLSAYDLSGDKVFLEKARDIADRLLPAWNTR--TGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIA 254 (569)
Q Consensus 177 ttIR~LGGLLSAY~LSgd~~lL~KA~eLadrLlpAFdTp--tGiP~~~iNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~ 254 (569)
.+-|.+-++.-||. +|++.+++.|+...+.|+..+-.+ .|+- ..++ ..|.+..+. .+=+-+-+..=+..
T Consensus 52 ~nar~i~~~a~a~~-~g~~~~l~~A~~~~~fl~~~~~D~~~GG~~-~s~d-~dg~~~~~k------~lyd~Af~i~al~~ 122 (421)
T 2zbl_A 52 ITARMLHVYSVAAS-MGRPGAYDLVDHGIKAMNGALRDKKYGGWY-ACVN-DQGVVDASK------QGYQHFFALLGAAS 122 (421)
T ss_dssp HHHHHHHHHHHHHH-TTCTTHHHHHHHHHHHHTTTTBCTTTSSBC-SEEE-TTEEEECCE------EHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-cCChhHHHHHHHHHHHHHHhccCcCCCeEE-EEeC-CCCCcCCch------hHHHHHHHHHHHHH
Confidence 77888899999987 899999999999999998876443 3444 3333 223221111 11112222223334
Q ss_pred HHHHhCCchHHHHHHHHHHHHhhcC--CCCCCcceeecCCCCCCCCCeeeecccCch-HHHHHHHHHHhcCCCCCcchHH
Q 008341 255 LSQRTGDPKYRQKAEKVIVELNKTF--PADGLLPIYISPDRGTPSYSTITFGAMGDS-FYEYLLKVWIQGNKTSAVKPYR 331 (569)
Q Consensus 255 LS~lTGd~kY~~~a~~i~~~L~~~~--~~~GL~p~~id~~tg~~~~~~~t~Ga~~DS-yYEYLLK~~iL~g~~~~~~~~~ 331 (569)
.+.||++.|.+.|+.+.+.+.+.. +..|++-...+.+... .....++ ++-+ .-|-|++.+.++|+.+ |.
T Consensus 123 -~~~tg~~~~l~~a~~~~~~l~~~~~d~~~Ggf~~~~d~d~~~-~~~~~~~--n~~m~~~~al~~l~~~tgd~~----~~ 194 (421)
T 2zbl_A 123 -AVTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFSQ-TEDYRGG--NANMHAVEAFLIVYDVTHDKK----WL 194 (421)
T ss_dssp -HHTTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTTSCS-BCSCEEH--HHHHHHHHHHHHHHHTTCCTH----HH
T ss_pred -HHHhCCccHHHHHHHHHHHHHHHhccCCCCCeeeeecCCCCc-ccccCCC--cHHHHHHHHHHHHHHhhCCHH----HH
Confidence 588999999999999999998843 2367777777766422 2222222 2222 3688999999998654 55
Q ss_pred HHHHHHHHHHHHhccccCCCCC--eeeeccCCCcccc-cccccccc-----cchhh--------hhhcCCCC-CCCch-H
Q 008341 332 DMWETSMKGLLSLVRRSTPSSF--TYICEKNGDSLID-KMDELACF-----APGMI--------ALGSSGYG-PGDSE-K 393 (569)
Q Consensus 332 ~my~~a~~~i~~ll~~~~~~~~--~~v~~~~g~~~~~-~m~hLsCF-----~pGml--------aLGa~~~~-~~~~~-~ 393 (569)
+.-.+.++.+.+.+.......+ .|-.+.+. .... .-+.-.+| -||-. -++..... .++.+ +
T Consensus 195 ~~A~~~~~~~~~~~~~~~~~~l~~~f~~~~~~-~~~~~~dd~~~r~~~~~~~pgh~iE~~wlLl~~~~~~~~~~~~~~~~ 273 (421)
T 2zbl_A 195 DRALRIASVIIHDVARNGDYRVNEHFDSQWNP-IRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEARFETPPAW 273 (421)
T ss_dssp HHHHHHHHHHCCCCCGGGTTCCCCEECTTSCB-CTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHHHHTTCCCCTH
T ss_pred HHHHHHHHHHHHHhccCCCCchhhhcCCcccc-chhccCCCcccccccCCCCCChHHHHHHHHHHHHHHcccccccchHH
Confidence 5555555555543332111111 12111110 0000 00011233 24432 22221100 01113 7
Q ss_pred HHHHHHHHHHHHHHhhccCC--CCccceeEeecC-CCccccccCCCCCchhHHHHHHHHHhhcCcchHHHHHHHHHHHHH
Q 008341 394 FLSLAEELAWTCYNFYQSTP--TKLAGENYFFRD-GQDMSVGTSWNILRPETVESLFYLWRLTGNKTYKEWGWNIFQAFE 470 (569)
Q Consensus 394 ~l~lA~~L~~tC~~~y~~t~--tGl~PE~~~f~~-~~~~~~~~~~y~LRPE~IESlfyLyR~TGD~~yre~gW~if~ai~ 470 (569)
+++.|.++++.+....-... .|+--. .+. +........++. --|.+..+..||++|||++|++++-++++.+.
T Consensus 274 ~l~~A~~l~~~~~~~g~d~~~~GG~~~~---~~~~g~~~~~~k~~w~-~aea~~all~l~~~tgd~~yl~~a~~~~~~~~ 349 (421)
T 2zbl_A 274 LLEDAKGLFHATIRDAWAPDGADGFVYS---VDWDGKPIVRERVRWP-IVEAMGTAYALYTLTDDSQYEEWYQKWWDYCI 349 (421)
T ss_dssp HHHHHHHHHHHHHHHHBSCSSSSSBCSC---BCTTSCBSCCCEEHHH-HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCcEEEe---ecCCCCccCCCcccHH-HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 99999999988865432211 232211 111 111000001111 35899999999999999999999999999999
Q ss_pred HHccc
Q 008341 471 KNSRI 475 (569)
Q Consensus 471 k~~r~ 475 (569)
++...
T Consensus 350 ~~~~d 354 (421)
T 2zbl_A 350 KYLMD 354 (421)
T ss_dssp HHTBC
T ss_pred HhCCC
Confidence 88875
No 14
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=97.26 E-value=0.0085 Score=62.72 Aligned_cols=258 Identities=16% Similarity=0.219 Sum_probs=140.4
Q ss_pred hhhhccccceeeccCCChhHHHHHHHHHHHHhhcccCCCCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHH
Q 008341 178 TIRVVGGLLSAYDLSGDKVFLEKARDIADRLLPAWNTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQ 257 (569)
Q Consensus 178 tIR~LGGLLSAY~LSgd~~lL~KA~eLadrLlpAFdTptGiP~~~iNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~ 257 (569)
+-=+++||+-+|++++|+.+++.|++.++.++. +.|-.. .+.+. -+. .+ +| .=+..|.+
T Consensus 43 ~G~~~~gl~~~y~~tgd~~y~~~a~~~~~~~~~----~~g~l~----~~~~~--------lDd-~~-~g---~~ll~lY~ 101 (373)
T 1nc5_A 43 QGVFLCGVLRLWEATGEKRYFEYAKAYADLLID----DNGNLL----FRRDE--------LDA-IQ-AG---LILFPLYE 101 (373)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHBC----TTCCBC----CCTTC--------GGG-TG-GG---GGHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhC----CCCccc----CCCCC--------cch-HH-HH---HHHHHHHH
Confidence 445689999999999999999999999999862 233111 11111 011 11 23 33677889
Q ss_pred HhCCchHHHHHHHHHHHHhhcC-CCCCCcceeecCCCCCCCCCeeeecccCchHH---HHHHHHHHhcCCCCCcchHHHH
Q 008341 258 RTGDPKYRQKAEKVIVELNKTF-PADGLLPIYISPDRGTPSYSTITFGAMGDSFY---EYLLKVWIQGNKTSAVKPYRDM 333 (569)
Q Consensus 258 lTGd~kY~~~a~~i~~~L~~~~-~~~GL~p~~id~~tg~~~~~~~t~Ga~~DSyY---EYLLK~~iL~g~~~~~~~~~~m 333 (569)
+|||++|.+.|..+.+.|...+ ...|-+- +.. .. .... -.|.-| ..|.+.+.++|+.+ |.+.
T Consensus 102 ~Tgd~~yl~~a~~la~~l~~~~r~~~G~fw---~~~--~~-~~~~----w~D~l~m~~p~L~~l~~~tgd~~----y~d~ 167 (373)
T 1nc5_A 102 QTKDERYVKAAKRLRSLYGTLNRTSEGGFW---HKD--GY-PYQM----WLDGLYMGGPFALKYANLKQETE----LFDQ 167 (373)
T ss_dssp HHCCHHHHHHHHHHHGGGGTSCBCTTSCBC---SCT--TS-TTEE----ETHHHHHHHHHHHHHHHHHTCTH----HHHH
T ss_pred HhCCHHHHHHHHHHHHHHHhccCCCCCCee---ccC--CC-CCeE----EeCcHHHHHHHHHHHHHHHCCHH----HHHH
Confidence 9999999999999999996643 2233221 100 00 0111 134443 56899999999765 3333
Q ss_pred HHHHHHHHHHhccccCCCCCeeeeccCCCcccccc----cccccccc-hh--hhhhc----CCCCC--CCchHHHHHHHH
Q 008341 334 WETSMKGLLSLVRRSTPSSFTYICEKNGDSLIDKM----DELACFAP-GM--IALGS----SGYGP--GDSEKFLSLAEE 400 (569)
Q Consensus 334 y~~a~~~i~~ll~~~~~~~~~~v~~~~g~~~~~~m----~hLsCF~p-Gm--laLGa----~~~~~--~~~~~~l~lA~~ 400 (569)
=.+.++...+++... ..++.| .........++- ..-.+||+ |+ .+.|- +..+. ...+++++.+++
T Consensus 168 A~~~~~~~~~~l~D~-~tGl~~-h~~~~~~~~~w~d~~tg~~~~~WaRg~gW~~~gl~~~l~~lp~~~~~~~~~~~~~~~ 245 (373)
T 1nc5_A 168 VVLQESLMRKHTKDA-KTGLFY-HAWDEAKKMPWANEETGCSPEFWARSIGWYVMSLADMIEELPKKHPNRHVWKNTLQD 245 (373)
T ss_dssp HHHHHHHHHHHHBCT-TTSCBC-SEEETTCCSTTSCTTTCBCSCCBHHHHHHHHHHHHHHGGGSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCC-CCCCEE-eecCCccccccccccCCCCCCcccchHhHHHHHHHHHHHhCCccchhHHHHHHHHHH
Confidence 333333333444322 234433 211111111110 01123442 22 11111 12221 134678999999
Q ss_pred HHHHHHHhhccCC-CCccceeEe--ecCCCccccccCCCCCchhHHHHHHHHHhhc-----C--cchHHHHHHHHHHHHH
Q 008341 401 LAWTCYNFYQSTP-TKLAGENYF--FRDGQDMSVGTSWNILRPETVESLFYLWRLT-----G--NKTYKEWGWNIFQAFE 470 (569)
Q Consensus 401 L~~tC~~~y~~t~-tGl~PE~~~--f~~~~~~~~~~~~y~LRPE~IESlfyLyR~T-----G--D~~yre~gW~if~ai~ 470 (569)
+++.+.+.- .| +|+ ++ ++.+. ....| +|+==|.++.|-+- | |++|++.+.++++++.
T Consensus 246 ~a~~l~~~q--~~~dG~----W~~~ld~~~----~~~~~---~EsSatA~~ay~l~~g~~~g~l~~~Y~~~a~k~~~~l~ 312 (373)
T 1nc5_A 246 MIKSICRYQ--DKETGL----WYQIVDKGD----RSDNW---LESSGSCLYMYAIAKGINKGYLDRAYETTLLKAYQGLI 312 (373)
T ss_dssp HHHHHHTTS--CTTTSC----CBSBTTCTT----STTCC---BCHHHHHHHHHHHHHHHHHTSSCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHhc--CCCCCc----eeeecCCCC----CCCCC---ccccHHHHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHH
Confidence 999987643 23 663 22 11110 00122 46544555444332 2 7899999999999998
Q ss_pred HHc--ccCcCccccccC
Q 008341 471 KNS--RIESGYVGLKDV 485 (569)
Q Consensus 471 k~~--r~~~Gya~l~dV 485 (569)
+++ ..+.|.-.+.+|
T Consensus 313 ~~~~~~~~dG~l~~~~~ 329 (373)
T 1nc5_A 313 QHKTETSEDGAFLVKDI 329 (373)
T ss_dssp HHHEEECTTSCEEECCE
T ss_pred HhceeECCCCCEEecce
Confidence 865 356687655554
No 15
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=97.15 E-value=0.0076 Score=63.70 Aligned_cols=221 Identities=17% Similarity=0.138 Sum_probs=126.7
Q ss_pred chhhhhccccceeeccCCChhHHHHHHHHHHHHhhcccCCCCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHH
Q 008341 176 ETTIRVVGGLLSAYDLSGDKVFLEKARDIADRLLPAWNTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIAL 255 (569)
Q Consensus 176 EttIR~LGGLLSAY~LSgd~~lL~KA~eLadrLlpAFdTptGiP~~~iNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~L 255 (569)
+..-=+.-++..+|.|+||+.+++-|.+-|+.|+.-|+...|.-.++ +.. + .+.|. +..++--+-. ..=+...
T Consensus 88 D~Gf~~~~s~~~~y~ltg~~~~~~~~~~aA~~L~~r~~~~~g~i~sw-~~~-~---~~~~~-~~~iID~mmn-i~~L~~A 160 (377)
T 2ahf_A 88 NIGFLYSLSAKAQWIVEKDESARKLALDAADVLMRRWRADAGIIQAW-GPK-G---DPENG-GRIIIDCLLN-LPLLLWA 160 (377)
T ss_dssp THHHHHHTTHHHHHHHHCCHHHHHHHHHHHHHHHTTEETTTTEECCB-SST-T---CTTTT-TEEEGGGGGG-HHHHHHH
T ss_pred CchHhhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCCCCCeEEec-cCC-C---CCCCC-ceEEechHHH-HHHHHHH
Confidence 33334455777899999999999999999999999998432433322 111 1 11221 1222222211 1225566
Q ss_pred HHHhCCchHHHHHHHHHHHHhhc-CCCC-CCcce-eecCCCCCCCCCeeeecccCchH---------HHHHHHHHHhcCC
Q 008341 256 SQRTGDPKYRQKAEKVIVELNKT-FPAD-GLLPI-YISPDRGTPSYSTITFGAMGDSF---------YEYLLKVWIQGNK 323 (569)
Q Consensus 256 S~lTGd~kY~~~a~~i~~~L~~~-~~~~-GL~p~-~id~~tg~~~~~~~t~Ga~~DSy---------YEYLLK~~iL~g~ 323 (569)
+++||||+|.+.|.+..+.+.+. ...+ .++-. ..|+.+|++..+ .++-+..|.+ -.-++-.|-.+++
T Consensus 161 ~~~~gd~~y~~~A~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~~-~t~qG~~dds~WaRGqAw~i~gl~~ly~~T~d 239 (377)
T 2ahf_A 161 GEQTGDPEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRG-GTHQGNTDGSTWTRGQAWGIYGFALNSRYLGN 239 (377)
T ss_dssp HHHHCCTHHHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEE-ECSSSSSTTSCBHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHhCCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCeeeC-CCcCCcCCcchhHHHHHHHHHHHHHHHHHHCC
Confidence 79999999999999988888873 3333 33333 368889987432 1232333332 1334555666664
Q ss_pred CCCcchHHHHHHHHHHHHHHhccccCCCCCeeeeccCC-Ccccc-cccccccccchhhhhhcCCCC-CCCchHHHHHHHH
Q 008341 324 TSAVKPYRDMWETSMKGLLSLVRRSTPSSFTYICEKNG-DSLID-KMDELACFAPGMIALGSSGYG-PGDSEKFLSLAEE 400 (569)
Q Consensus 324 ~~~~~~~~~my~~a~~~i~~ll~~~~~~~~~~v~~~~g-~~~~~-~m~hLsCF~pGmlaLGa~~~~-~~~~~~~l~lA~~ 400 (569)
..|.+.-.+..+.+.+++. ..+..|-..... ....+ .-+.-++++-|++-|+..... ....+++.+.|++
T Consensus 240 ----~~yL~~A~~la~~~l~~~~---~d~~pywd~~~~~~~~~~~d~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~ 312 (377)
T 2ahf_A 240 ----ADLLETAKRMARHFLARVP---EDGVVYWDFEVPQEPSSYRDSSASAITACGLLEIASQLDESDPERQRFIDAAKT 312 (377)
T ss_dssp ----HHHHHHHHHHHHHHHTTCC---TTSSCBSBTTSCCCTTSCBCHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHH
T ss_pred ----hHHHHHHHHHHHHHHHhhH---HhCCcccccCCCccCCCccCCCHHHHHHHHHHHHHHhcCccccchHHHHHHHHH
Confidence 3355555555555555541 112212111111 11111 234556777888888775321 1124679999999
Q ss_pred HHHHHHHhhcc
Q 008341 401 LAWTCYNFYQS 411 (569)
Q Consensus 401 L~~tC~~~y~~ 411 (569)
+.++...-|..
T Consensus 313 ~l~~l~~~y~~ 323 (377)
T 2ahf_A 313 TVTALRDGYAE 323 (377)
T ss_dssp HHHHHHHHTBC
T ss_pred HHHHHHHHHhc
Confidence 99988887754
No 16
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=97.13 E-value=0.00033 Score=73.15 Aligned_cols=146 Identities=18% Similarity=0.151 Sum_probs=93.2
Q ss_pred cccceeeccCCChhHHHHHHHHHHHH-hhcccCC--CCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHHh
Q 008341 183 GGLLSAYDLSGDKVFLEKARDIADRL-LPAWNTR--TGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQRT 259 (569)
Q Consensus 183 GGLLSAY~LSgd~~lL~KA~eLadrL-lpAFdTp--tGiP~~~iNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lT 259 (569)
=+++.||++++|+..|++|+++++.+ ...||++ .||++.. . .+.+..++ .-|-+..=+.+|+++|
T Consensus 99 la~~~aye~t~~~~yL~~A~~l~~~l~~~~wd~~~gGGi~W~~---~-------~~~~knai--sN~~~~~~la~l~~~t 166 (349)
T 3k7x_A 99 LAAYRLYKATGKSIYLEDAQLVWQDLVDTGWNDIMGGGFAWRR---P-------QMYYKNTP--VNAPFIILSCWLYNEL 166 (349)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCSGGGSCBEEET---T-------EEEEEEHH--HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCchHHHHHHHHHHHHHHhCCCCCCCCceEecC---C-------Cccccchh--hHHHHHHHHHHHHHHh
Confidence 38999999999999999999999999 7999975 3564421 1 01111122 1223334467899999
Q ss_pred CCchHHHHHHHHHHHHhh-cCCCCCCcceeecCC-CCCCCC-CeeeecccCchHHHHHHHHHHhcCCCCCcchHHHHHHH
Q 008341 260 GDPKYRQKAEKVIVELNK-TFPADGLLPIYISPD-RGTPSY-STITFGAMGDSFYEYLLKVWIQGNKTSAVKPYRDMWET 336 (569)
Q Consensus 260 Gd~kY~~~a~~i~~~L~~-~~~~~GL~p~~id~~-tg~~~~-~~~t~Ga~~DSyYEYLLK~~iL~g~~~~~~~~~~my~~ 336 (569)
||++|.+.|+++++-+.+ ....+|++-+-++.. .|.... ...|.+.+. +..=+.-+|-.+|+ +.|.+.-.+
T Consensus 167 gd~~Yl~~A~~~~~w~~~~l~d~~g~v~Dg~~~~~~g~~~~~~~~tYnqg~--~l~g~~~LY~~T~d----~~yl~~a~~ 240 (349)
T 3k7x_A 167 NETKYLEWAMKTYEWQTKVLVREDGFVEDGINRLEDGTIDYEWKFTYNQGV--YIGANLELYRITKE----AIYLDTANK 240 (349)
T ss_dssp CCHHHHHHHHHHHHHHHHHHBCTTSCBCCEECTTSSSCBCTTCCCHHHHHH--HHHHHHHHHHHHCC----HHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcCCCCCCeEecCCccCCCCccCCcCeeeHHHHH--HHHHHHHHHHhhCc----HHHHHHHHH
Confidence 999999999999999987 233347775555432 233211 122222111 33445566777775 447777777
Q ss_pred HHHHHHHhcc
Q 008341 337 SMKGLLSLVR 346 (569)
Q Consensus 337 a~~~i~~ll~ 346 (569)
.++.+.+++.
T Consensus 241 l~~~~~~~f~ 250 (349)
T 3k7x_A 241 TAAISLKELT 250 (349)
T ss_dssp HHHHHHHHHE
T ss_pred HHHHHHHHhc
Confidence 7777666543
No 17
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=97.07 E-value=0.0049 Score=64.56 Aligned_cols=217 Identities=9% Similarity=0.018 Sum_probs=116.8
Q ss_pred ccccceeeccCCChhHHHHHHHHHHHHhhcccCCCCCCcceeecCCCCCCCCCCCCCCccccccccchhh-HHHHHHHhC
Q 008341 182 VGGLLSAYDLSGDKVFLEKARDIADRLLPAWNTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLE-LIALSQRTG 260 (569)
Q Consensus 182 LGGLLSAY~LSgd~~lL~KA~eLadrLlpAFdTptGiP~~~iNl~~g~~~~~~~~~~~s~lAe~GSl~LE-F~~LS~lTG 260 (569)
.=+|+.+|++++|+.+++.|+++++.|...|+++.|--+.. . .++ .....+.--|.++ +.+|+++||
T Consensus 93 g~~ll~lY~~Tgd~~yl~~a~~la~~l~~~~r~~~G~fw~~-------~---~~~--~~~w~D~l~m~~p~L~~l~~~tg 160 (373)
T 1nc5_A 93 GLILFPLYEQTKDERYVKAAKRLRSLYGTLNRTSEGGFWHK-------D---GYP--YQMWLDGLYMGGPFALKYANLKQ 160 (373)
T ss_dssp GGGHHHHHHHHCCHHHHHHHHHHHGGGGTSCBCTTSCBCSC-------T---TST--TEEETHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHhccCCCCCCeecc-------C---CCC--CeEEeCcHHHHHHHHHHHHHHHC
Confidence 34688899999999999999999999998888877643321 1 111 1122222113333 568999999
Q ss_pred CchHHHHHHHHHHHHhhc--CCCCCCcceeecCCCCC-CCCC----eeeecccCchHHHH-HHHHHHhcCCCC-CcchHH
Q 008341 261 DPKYRQKAEKVIVELNKT--FPADGLLPIYISPDRGT-PSYS----TITFGAMGDSFYEY-LLKVWIQGNKTS-AVKPYR 331 (569)
Q Consensus 261 d~kY~~~a~~i~~~L~~~--~~~~GL~p~~id~~tg~-~~~~----~~t~Ga~~DSyYEY-LLK~~iL~g~~~-~~~~~~ 331 (569)
|++|.+.|.+.++...+. -+..||+-.-.+..... |.+. .-++=++|..-+=| |...+-.....+ .-+.|.
T Consensus 161 d~~y~d~A~~~~~~~~~~l~D~~tGl~~h~~~~~~~~~w~d~~tg~~~~~WaRg~gW~~~gl~~~l~~lp~~~~~~~~~~ 240 (373)
T 1nc5_A 161 ETELFDQVVLQESLMRKHTKDAKTGLFYHAWDEAKKMPWANEETGCSPEFWARSIGWYVMSLADMIEELPKKHPNRHVWK 240 (373)
T ss_dssp CTHHHHHHHHHHHHHHHHHBCTTTSCBCSEEETTCCSTTSCTTTCBCSCCBHHHHHHHHHHHHHHGGGSCTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCCCCEEeecCCccccccccccCCCCCCcccchHhHHHHHHHHHHHhCCccchhHHHHH
Confidence 999999999988888773 35678887766665432 1110 01122233332222 222332222211 003355
Q ss_pred HHHHHHHHHHHHhccccCC-CCCee--eeccCCCcccccccccccccchhhhhhcCCCCCCCchHHHHHHHHHHHHHHHh
Q 008341 332 DMWETSMKGLLSLVRRSTP-SSFTY--ICEKNGDSLIDKMDELACFAPGMIALGSSGYGPGDSEKFLSLAEELAWTCYNF 408 (569)
Q Consensus 332 ~my~~a~~~i~~ll~~~~~-~~~~~--v~~~~g~~~~~~m~hLsCF~pGmlaLGa~~~~~~~~~~~l~lA~~L~~tC~~~ 408 (569)
+.+++.++++.++. .+ +++-+ ++.-.........+.-++|+-|++-+--.++- .++|.+.|++..+.-..-
T Consensus 241 ~~~~~~a~~l~~~q---~~~dG~W~~~ld~~~~~~~~~EsSatA~~ay~l~~g~~~g~l---~~~Y~~~a~k~~~~l~~~ 314 (373)
T 1nc5_A 241 NTLQDMIKSICRYQ---DKETGLWYQIVDKGDRSDNWLESSGSCLYMYAIAKGINKGYL---DRAYETTLLKAYQGLIQH 314 (373)
T ss_dssp HHHHHHHHHHHTTS---CTTTSCCBSBTTCTTSTTCCBCHHHHHHHHHHHHHHHHHTSS---CGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc---CCCCCceeeecCCCCCCCCCccccHHHHHHHHHHHHHHCCCC---cHHHHHHHHHHHHHHHHh
Confidence 66666666665543 22 34322 21111001112233344566666542111221 247988888777766554
Q ss_pred hc-cCCCCc
Q 008341 409 YQ-STPTKL 416 (569)
Q Consensus 409 y~-~t~tGl 416 (569)
|. ..+.|.
T Consensus 315 ~~~~~~dG~ 323 (373)
T 1nc5_A 315 KTETSEDGA 323 (373)
T ss_dssp HEEECTTSC
T ss_pred ceeECCCCC
Confidence 42 344454
No 18
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=97.05 E-value=0.0084 Score=63.28 Aligned_cols=244 Identities=11% Similarity=0.063 Sum_probs=128.8
Q ss_pred hhHHHHHHHHHHhhcCCCCCccccccchhhhhccccceeeccCCChhHHHHHHHHHHHHhhcc-cCCCCCCcceeecCCC
Q 008341 150 DYSFSSEFMWIANSLDFNKSYDASVFETTIRVVGGLLSAYDLSGDKVFLEKARDIADRLLPAW-NTRTGIPYNVINLAHG 228 (569)
Q Consensus 150 ~eEF~~A~~~V~~~ldF~~~~~vsvFEttIR~LGGLLSAY~LSgd~~lL~KA~eLadrLlpAF-dTptGiP~~~iNl~~g 228 (569)
++-++.|.+|+...++ .++.+.-.+ ++-....|+-+|++++|+.+++.|+++||.|+.-+ +|+.|--.... .+
T Consensus 87 ~~y~~~a~~~~~~~~~--~~~~~~n~D-~~~~~~~l~~lY~~Tgd~~Yl~~a~~~ad~L~~~~~r~~~Ggf~~~~---~~ 160 (382)
T 3pmm_A 87 IEMRDIIDRWFADRFA--EGATTKNVN-TMAPFLTLAYRFEETGRMAYLPWLESWAEWAMHEMPRTEQGGMQHMT---LA 160 (382)
T ss_dssp HHHHHHHHHHHHHHHH--HCCCCCCTT-TTTTHHHHHHHHHHHCCGGGHHHHHHHHHHHHHTSCBCGGGCBCCCC---SS
T ss_pred HHHHHHHHHHHHHHHc--CCCCcCccc-chHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhCCCCcCCCeeeec---CC
Confidence 4445666667754321 111111011 12334578999999999999999999999998644 56665433210 00
Q ss_pred CCCCCCCCCCCccccccccchhhH-HHHHHHhCCchHHHHHHHHHHHHhh-cC-CCCCCcceeecCCCCCCCCCeeeecc
Q 008341 229 NPHNPSWTGGESILADSGTEQLEL-IALSQRTGDPKYRQKAEKVIVELNK-TF-PADGLLPIYISPDRGTPSYSTITFGA 305 (569)
Q Consensus 229 ~~~~~~~~~~~s~lAe~GSl~LEF-~~LS~lTGd~kY~~~a~~i~~~L~~-~~-~~~GL~p~~id~~tg~~~~~~~t~Ga 305 (569)
+........+.--|.++| ..++++|||++|.+.|.+-++...+ .+ +..||+-.-.+...+... ....|+
T Consensus 161 ------~~~~~~~WiDgl~M~~p~La~~~~~tgd~~y~d~A~~q~~~~~~~l~D~~tGl~~h~~~~~~~~~~-~~~~Wa- 232 (382)
T 3pmm_A 161 ------EENHQQMWDDTLMMTVLPLAKIGKLLNRPQYVEEATYQFLLHVQNLMDRETGLWFHGWNYEGRHNF-ARARWA- 232 (382)
T ss_dssp ------CCCTTEEETTHHHHTHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHBCTTTSCBCSEEETTTTBCT-TCCCBH-
T ss_pred ------CCCCCcEEecchhhhHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHccCCCCCCeeeeccCCCCCCC-Ccceec-
Confidence 011112233433456666 6799999999999988877777776 33 457887776665432211 112221
Q ss_pred cCchHHHH-HHHHHHh--cCCCC-CcchHHHHHHHHHHHHHHhccccCCCCCeeeeccCCCcccccccccccccchhhhh
Q 008341 306 MGDSFYEY-LLKVWIQ--GNKTS-AVKPYRDMWETSMKGLLSLVRRSTPSSFTYICEKNGDSLIDKMDELACFAPGMIAL 381 (569)
Q Consensus 306 ~~DSyYEY-LLK~~iL--~g~~~-~~~~~~~my~~a~~~i~~ll~~~~~~~~~~v~~~~g~~~~~~m~hLsCF~pGmlaL 381 (569)
+|..-+=| |...+-. ..... .-+.+.+.+++.++++.++.. ++++-+.. ..........+.-++|+-|++-
T Consensus 233 RG~gW~~~gl~~~l~~l~~p~~~~~~~~~~~~~~~~a~~~~~~q~---~~G~W~~~-~d~~~~y~EsSatA~~ay~ll~- 307 (382)
T 3pmm_A 233 RGNSWLTMVIPDFLELVDLPEGNAVRRYLITVLDAQIAALAECQD---DSGLWHTL-LDDPHSYLEASATAGFAYGILK- 307 (382)
T ss_dssp HHHHHHHHHHHHHHHHHCCCTTCHHHHHHHHHHHHHHHHHHHHCC---TTSCEESB-TTCTTSCEEHHHHHHHHHHHHH-
T ss_pred ccccHHHHHHHHHHHhhcCCcchhhHHHHHHHHHHHHHHHHHcCC---CCCChhhc-cCCCCCCccccHHHHHHHHHHH-
Confidence 22222211 1222211 11111 013466777777777777543 34443311 1111111233334455555544
Q ss_pred hcC-CCCCCCchHHHHHHHHHHHHHHHhhccCCCCcc
Q 008341 382 GSS-GYGPGDSEKFLSLAEELAWTCYNFYQSTPTKLA 417 (569)
Q Consensus 382 Ga~-~~~~~~~~~~l~lA~~L~~tC~~~y~~t~tGl~ 417 (569)
|.+ ++- .++|...|++..+++..- ..+.|..
T Consensus 308 ~~~~g~l---~~~Y~~~a~ka~~~l~~~--i~~dG~l 339 (382)
T 3pmm_A 308 AVRKRYV---GQHYAGVAEKAIRGIVQN--ISPQGEL 339 (382)
T ss_dssp HHHTTSS---CGGGHHHHHHHHHHHHHT--BCTTSCB
T ss_pred HHHcCCC---cHHHHHHHHHHHHHHHhh--CCCCCCE
Confidence 343 222 257999998888877643 3455543
No 19
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=96.93 E-value=0.0068 Score=64.51 Aligned_cols=217 Identities=16% Similarity=0.115 Sum_probs=125.0
Q ss_pred hhhhhccccceeeccCCChhHHHHHHHHHHHHhhcccCCCCCCcceeecCCCCCCCCCCCCCCccccccccchh-hHHHH
Q 008341 177 TTIRVVGGLLSAYDLSGDKVFLEKARDIADRLLPAWNTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQL-ELIAL 255 (569)
Q Consensus 177 ttIR~LGGLLSAY~LSgd~~lL~KA~eLadrLlpAFdTptGiP~~~iNl~~g~~~~~~~~~~~s~lAe~GSl~L-EF~~L 255 (569)
..--+.=++..+|.|+||+..++-|.+-|+.|+.-|++..|.-.++-... ..+.+ ...+-.+ |.+ =+..-
T Consensus 115 ~GF~~~~s~~~~y~ltg~~~~~~~~~~aA~~L~~r~~~~~g~iqsw~~~~------~~~~~-~~iID~~--mni~~L~~A 185 (397)
T 2zzr_A 115 LGFLYTPSCTAEYRINGDVKALEATIKAADKLMERYQEKGGFIQAWGELG------YKEHY-RLIIDCL--LNIQLLFFA 185 (397)
T ss_dssp HHHHHTTTHHHHHHHHCCHHHHHHHHHHHHHHHTTEETTTTEECCSSSTT------CGGGC-EEETTHH--HHTHHHHHH
T ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhCcCCCEEEecccCC------CCCCC-ceeechH--hHHHHHHHH
Confidence 33344556777999999999999999999999999987666444331111 11111 1111111 112 24445
Q ss_pred HHHhCCchHHHHHHHHHHHHhh-cCCCC-CCcce-eecCCCCCCCCCeeeecccCchH-----H----HHHHHHHHhcCC
Q 008341 256 SQRTGDPKYRQKAEKVIVELNK-TFPAD-GLLPI-YISPDRGTPSYSTITFGAMGDSF-----Y----EYLLKVWIQGNK 323 (569)
Q Consensus 256 S~lTGd~kY~~~a~~i~~~L~~-~~~~~-GL~p~-~id~~tg~~~~~~~t~Ga~~DSy-----Y----EYLLK~~iL~g~ 323 (569)
+++||||+|.+.|.+..+.+.+ ....+ +++-. ..|+.+|++..+ .++-+..|.+ + .-++-.|-.+++
T Consensus 186 ~~~~gd~~y~~~A~~ha~~~l~~~~r~dgs~~h~~~~d~~~G~~~~~-~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d 264 (397)
T 2zzr_A 186 YEQTGDEKYRQVAVNHFYASANNVVRDDSSAFHTFYFDPETGEPLKG-VTRQGYSDESSWARGQAWGIYGIPLSYRKMKD 264 (397)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHTBCTTSCBCSEEEECTTTCCEEEE-ECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHhCCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCcccC-CcccccCcchhhHHHHHHHHHHHHHHHHHHCC
Confidence 7999999999999988888877 33333 33333 347778886422 2333333332 2 233445666775
Q ss_pred CCCcchHHHHHHHHHHHHHHhccccCCCCCeeeeccCC-Cccc-ccccccccccchhhhhhcCCCCCCCchH--HHHHHH
Q 008341 324 TSAVKPYRDMWETSMKGLLSLVRRSTPSSFTYICEKNG-DSLI-DKMDELACFAPGMIALGSSGYGPGDSEK--FLSLAE 399 (569)
Q Consensus 324 ~~~~~~~~~my~~a~~~i~~ll~~~~~~~~~~v~~~~g-~~~~-~~m~hLsCF~pGmlaLGa~~~~~~~~~~--~l~lA~ 399 (569)
.+ |.+.-.+..+-+.+++. ..+..|-..... .... ..-+.-++.+-|++-|+..... .+.++ +.+.|+
T Consensus 265 ~~----yL~~A~~la~~~l~~~~---~d~~pywdt~~~~~~~~~~D~Sa~aiaA~~Ll~L~~~~~~-~~~~~~~Y~~~A~ 336 (397)
T 2zzr_A 265 YQ----QIILFKGMTNYFLNRLP---EDKVSYWDLIFTDGSGQPRDTSATATAVCGIHEMLKYLPE-VDPDKETYKYAMH 336 (397)
T ss_dssp HH----HHHHHHHHHHHHHHTCC---TTSCCBSBTTCCTTSCCCBCHHHHHHHHHHHHHHHTTSCT-TCTTHHHHHHHHH
T ss_pred HH----HHHHHHHHHHHHHHhhH---HhCCccccCCCCCCCCCcCCCCHHHHHHHHHHHHHHhcCc-cchhhHHHHHHHH
Confidence 44 55555555555555441 112112111111 1111 1234456677888888875322 22356 999999
Q ss_pred HHHHHHHHhhcc
Q 008341 400 ELAWTCYNFYQS 411 (569)
Q Consensus 400 ~L~~tC~~~y~~ 411 (569)
++.++....|..
T Consensus 337 ~~l~~l~~~y~~ 348 (397)
T 2zzr_A 337 TMLRSLIEQYSN 348 (397)
T ss_dssp HHHHHHHHHTBC
T ss_pred HHHHHHHHHHhc
Confidence 999999888854
No 20
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=96.71 E-value=0.011 Score=61.71 Aligned_cols=245 Identities=16% Similarity=0.079 Sum_probs=149.5
Q ss_pred hccccceeeccCCChhHHHHHHHHHHHHhhcccCCCCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHHhC
Q 008341 181 VVGGLLSAYDLSGDKVFLEKARDIADRLLPAWNTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQRTG 260 (569)
Q Consensus 181 ~LGGLLSAY~LSgd~~lL~KA~eLadrLlpAFdTptGiP~~~iNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lTG 260 (569)
.+|+|+-+|..++|+.+++.|.+..+.+... ....+| +. ..-+.|-+.+-+..+.++||
T Consensus 51 ~~~~l~d~~~~tgd~~y~~~a~~~~~~~~~~--~~~~~~-------------~~------~~DD~a~~~la~~~aye~t~ 109 (349)
T 3k7x_A 51 LVEVRLDAYLRTKKQADLEVAEKTYLHNKNR--NGGTLI-------------HD------FYDDMLWNALAAYRLYKATG 109 (349)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH--TTSSSC-------------CS------BHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHhc--CCCCCC-------------cc------CccHHHHHHHHHHHHHHHHC
Confidence 4699999999999999999999999988752 111111 11 13556667789999999999
Q ss_pred CchHHHHHHHHHHHH-hhcCCC--CCCcceeecCCCCCCCCCeeeecccCc-hHHHHHHHHHHhcCCCCCcchHHHHHHH
Q 008341 261 DPKYRQKAEKVIVEL-NKTFPA--DGLLPIYISPDRGTPSYSTITFGAMGD-SFYEYLLKVWIQGNKTSAVKPYRDMWET 336 (569)
Q Consensus 261 d~kY~~~a~~i~~~L-~~~~~~--~GL~p~~id~~tg~~~~~~~t~Ga~~D-SyYEYLLK~~iL~g~~~~~~~~~~my~~ 336 (569)
|++|.+.|.++++.+ ...... .|-+. .++.. .-.-.+.+. -+..-+.+.+..+|+.. |.+.=++
T Consensus 110 ~~~yL~~A~~l~~~l~~~~wd~~~gGGi~--W~~~~------~~~knaisN~~~~~~la~l~~~tgd~~----Yl~~A~~ 177 (349)
T 3k7x_A 110 KSIYLEDAQLVWQDLVDTGWNDIMGGGFA--WRRPQ------MYYKNTPVNAPFIILSCWLYNELNETK----YLEWAMK 177 (349)
T ss_dssp CHHHHHHHHHHHHHHHHHTBCSGGGSCBE--EETTE------EEEEEHHHHHHHHHHHHHHHHHHCCHH----HHHHHHH
T ss_pred CchHHHHHHHHHHHHHHhCCCCCCCCceE--ecCCC------ccccchhhHHHHHHHHHHHHHHhCCHH----HHHHHHH
Confidence 999999999999999 553322 23332 22211 001111122 34577889999999754 5555555
Q ss_pred HHHHHHHhccccCCCCCeeeeccC--CCccccccc---ccccccchhhhhhcCCCCCCCchHHHHHHHHHHHHHHHhhcc
Q 008341 337 SMKGLLSLVRRSTPSSFTYICEKN--GDSLIDKMD---ELACFAPGMIALGSSGYGPGDSEKFLSLAEELAWTCYNFYQS 411 (569)
Q Consensus 337 a~~~i~~ll~~~~~~~~~~v~~~~--g~~~~~~m~---hLsCF~pGmlaLGa~~~~~~~~~~~l~lA~~L~~tC~~~y~~ 411 (569)
.++-+.+.+... .+..|=+... .+....... --..++.|...|=-.. ..+++++.|.+|++.+.+.+.
T Consensus 178 ~~~w~~~~l~d~--~g~v~Dg~~~~~~g~~~~~~~~tYnqg~~l~g~~~LY~~T----~d~~yl~~a~~l~~~~~~~f~- 250 (349)
T 3k7x_A 178 TYEWQTKVLVRE--DGFVEDGINRLEDGTIDYEWKFTYNQGVYIGANLELYRIT----KEAIYLDTANKTAAISLKELT- 250 (349)
T ss_dssp HHHHHHHHHBCT--TSCBCCEECTTSSSCBCTTCCCHHHHHHHHHHHHHHHHHH----CCHHHHHHHHHHHHHHHHHHE-
T ss_pred HHHHHHhcCCCC--CCeEecCCccCCCCccCCcCeeeHHHHHHHHHHHHHHHhh----CcHHHHHHHHHHHHHHHHHhc-
Confidence 555565555443 2333322111 111111000 1123444444432111 247899999999999877654
Q ss_pred CCCCccceeEeecCCCccccccCCCCCchhHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHccc
Q 008341 412 TPTKLAGENYFFRDGQDMSVGTSWNILRPETVESLFYLWRLTGNKTYKEWGWNIFQAFEKNSRI 475 (569)
Q Consensus 412 t~tGl~PE~~~f~~~~~~~~~~~~y~LRPE~IESlfyLyR~TGD~~yre~gW~if~ai~k~~r~ 475 (569)
+.|+.+|.- .+.+. ..-+.+ ++--+-.+.++++++.|+.+--.--++.-++|+.
T Consensus 251 -~~gi~~~~~---~~~D~-~sFkgi-----~~r~L~~l~~~~p~~~~~~~l~~sa~aa~~~~~~ 304 (349)
T 3k7x_A 251 -EDGIFKDEG---NGGDE-GLFKGI-----FYRYFTDLIEETANKTYRDFVLNSCQILVENAKL 304 (349)
T ss_dssp -ETTEECCCC---SSSGG-GGHHHH-----HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHCEE
T ss_pred -cCCcccCCC---CCccH-HHHHHH-----HHHHHHHHHHHCChHHHHHHHHHHHHHHHHhCCC
Confidence 468776631 11110 011111 4445667889999999999999999999999954
No 21
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=96.52 E-value=0.011 Score=65.14 Aligned_cols=181 Identities=18% Similarity=0.155 Sum_probs=116.0
Q ss_pred CchHHHHHHHHHHHHhhcCCCCCCcceeecCCCCCCCCCeeeecccCchHHHHHHHHHHhcCCCCCcchHHHHHHHHHHH
Q 008341 261 DPKYRQKAEKVIVELNKTFPADGLLPIYISPDRGTPSYSTITFGAMGDSFYEYLLKVWIQGNKTSAVKPYRDMWETSMKG 340 (569)
Q Consensus 261 d~kY~~~a~~i~~~L~~~~~~~GL~p~~id~~tg~~~~~~~t~Ga~~DSyYEYLLK~~iL~g~~~~~~~~~~my~~a~~~ 340 (569)
+....+++++++.+-|+.....+.--+-+.|-+|...+ .+|+ +-+.-+-|==.||++-+ +-|++|++-
T Consensus 85 ~~~rr~~Vk~~F~haW~~Y~~~Awg~DEL~PlS~~g~d---~fg~-g~TLVDSLDTL~IMgl~--------~EF~~A~~~ 152 (538)
T 1x9d_A 85 LNYRQKGVIDVFLHAWKGYRKFAWGHDELKPVSRSFSE---WFGL-GLTLIDALDTMWILGLR--------KEFEEARKW 152 (538)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHCTTSSEEETTTTEEEC---SSSS-CHHHHHHHHHHHHTTCH--------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccccccCCCCccc---ccCC-ceeeeeccceeeecCCH--------HHHHHHHHH
Confidence 45678899999999998433333333566677776543 3555 56666777777888642 468899998
Q ss_pred HHHhccccCCCCCeeeeccCCCcccccccccccccchhhhhhcCCCCCCCchHHHHHHHHHHHHHHHhhccCCCCcccee
Q 008341 341 LLSLVRRSTPSSFTYICEKNGDSLIDKMDELACFAPGMIALGSSGYGPGDSEKFLSLAEELAWTCYNFYQSTPTKLAGEN 420 (569)
Q Consensus 341 i~~ll~~~~~~~~~~v~~~~g~~~~~~m~hLsCF~pGmlaLGa~~~~~~~~~~~l~lA~~L~~tC~~~y~~t~tGl~PE~ 420 (569)
|.+.+..... . ....++----++||+|. |+... ..+.+|+.|.+|++--.-.++ ||||+.--.
T Consensus 153 V~~~~~f~~d-~-----------~VsvFETtIR~LGGLLS--Ay~Ls--gd~~lL~kA~dLadrLlpAFd-TptgiP~~~ 215 (538)
T 1x9d_A 153 VSKKLHFEKD-V-----------DVNLFESTIRILGGLLS--AYHLS--GDSLFLRKAEDFGNRLMPAFR-TPSKIPYSD 215 (538)
T ss_dssp HHHHCCCCSS-C-----------EEEHHHHHHHHHHHHHH--HHHHH--CCHHHHHHHHHHHHHHGGGGC-STTSCCCSE
T ss_pred HHHhcCCCCC-c-----------eeehhheehhhhhhhhh--HHHhc--CCHHHHHHHHHHHHHHHHhhc-CCCCCCcce
Confidence 8764332211 0 11112222235677765 22221 145799999999998888885 799998888
Q ss_pred EeecCCCccccccCCCCCchhHHHH------HHHHHhhcCcchHHHHHHHHHHHHHHHc
Q 008341 421 YFFRDGQDMSVGTSWNILRPETVES------LFYLWRLTGNKTYKEWGWNIFQAFEKNS 473 (569)
Q Consensus 421 ~~f~~~~~~~~~~~~y~LRPE~IES------lfyLyR~TGD~~yre~gW~if~ai~k~~ 473 (569)
+++..|......... ..-+.|. .-+|-|+||||+|.+.+-.+++.+.+.-
T Consensus 216 vnl~~g~~~~~~~~~---~s~lAe~GSl~LEF~~LS~LTGd~~Y~~~a~r~~~~l~~~~ 271 (538)
T 1x9d_A 216 VNIGTGVAHPPRWTS---DSTVAEVTSIQLEFRELSRLTGDKKFQEAVEKVTQHIHGLS 271 (538)
T ss_dssp EETTTCCEECCTTCS---EEEHHHHHSSHHHHHHHHHHHCCTHHHHHHHHHHHHHHTCS
T ss_pred eeecccccCCCCcCC---CceeccccceeeeHHHHHHHhCCcHHHHHHHHHHHHHHhcc
Confidence 888776421110000 0112222 4578999999999999999999998754
No 22
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=96.14 E-value=0.026 Score=61.87 Aligned_cols=232 Identities=18% Similarity=0.166 Sum_probs=132.4
Q ss_pred CchHHHHHHHHHHHHhhcCCCCCCcceeecCCCCCCCCCeeee-c-ccCchHHHHHHHHHHhc---CCCCCcchHHHHHH
Q 008341 261 DPKYRQKAEKVIVELNKTFPADGLLPIYISPDRGTPSYSTITF-G-AMGDSFYEYLLKVWIQG---NKTSAVKPYRDMWE 335 (569)
Q Consensus 261 d~kY~~~a~~i~~~L~~~~~~~GL~p~~id~~tg~~~~~~~t~-G-a~~DSyYEYLLK~~iL~---g~~~~~~~~~~my~ 335 (569)
.....++|+.++.+-|+.....+.--+-+.|-+|...+.. + | +.|-..-+-|==.||+. .... ....+-|+
T Consensus 2 ~~~rr~~Vk~~F~haw~~Y~~~Awg~DEL~PlS~~g~~~~--~~g~g~G~TlVDSLDTL~IM~~~~~~~~--~gl~~Ef~ 77 (511)
T 1dl2_A 2 AGEMRDRIESMFLESWRDYSKHGWGYDVYGPIEHTSHNMP--RGNQPLGWIIVDSVDTLMLMYNSSTLYK--SEFEAEIQ 77 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTTCSEEETTTTEEECSS--TTCCCCCTTHHHHHHHHHHHHHHCSSSH--HHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCcCCCC--ccCCccceeeeecccceEEecccccccc--CCcHHHHH
Confidence 3456788999999999843333333345666666654321 3 3 33445555576778882 1111 24567899
Q ss_pred HHHHHHHHhccccCCCCCeeeeccCCCcccccccccccccchhhhhhcCCCC----CCCchHHHHHHHHHHHHHHHhhcc
Q 008341 336 TSMKGLLSLVRRSTPSSFTYICEKNGDSLIDKMDELACFAPGMIALGSSGYG----PGDSEKFLSLAEELAWTCYNFYQS 411 (569)
Q Consensus 336 ~a~~~i~~ll~~~~~~~~~~v~~~~g~~~~~~m~hLsCF~pGmlaLGa~~~~----~~~~~~~l~lA~~L~~tC~~~y~~ 411 (569)
+|++-|.+.+..... . -| ..++---=++||+|. |+... ......+|+.|.+|++--.-.+..
T Consensus 78 ~A~~~V~~~l~F~~d-~--~V---------svFETtIR~LGGLLS--Ay~Ls~~~~~~~d~~lL~kA~dLadrLlpAFd~ 143 (511)
T 1dl2_A 78 RSEHWINDVLDFDID-A--EV---------NVFETTIRMLGGLLS--AYHLSDVLEVGNKTVYLNKAIDLGDRLALAFLS 143 (511)
T ss_dssp HHHHHHHHTCCCCCS-S--EE---------EHHHHHHHHHHHHHH--HHHHHHHHTCSCHHHHHHHHHHHHHHHHGGGGS
T ss_pred HHHHHHHHhcCCCCC-c--ee---------chhheehhhhhhhhh--HHHhcccccCCCcHHHHHHHHHHHHHHHHhhcC
Confidence 999988874433211 0 11 111111224666654 21111 113468999999999999999976
Q ss_pred CCCCccceeEeecCCCcccccc-CCCCCchh----HHHHHHHHHhhcCcchHHHHHHHHHHHHHHHcc---cCcC-cccc
Q 008341 412 TPTKLAGENYFFRDGQDMSVGT-SWNILRPE----TVESLFYLWRLTGNKTYKEWGWNIFQAFEKNSR---IESG-YVGL 482 (569)
Q Consensus 412 t~tGl~PE~~~f~~~~~~~~~~-~~y~LRPE----~IESlfyLyR~TGD~~yre~gW~if~ai~k~~r---~~~G-ya~l 482 (569)
||||++--.+++..|....... .....=.| .+| .-+|-|+||||+|.+.+-.+++.+.+.-. ...| +...
T Consensus 144 TptgiP~~~vnl~~g~~~~~~~~~~~s~~Ae~gSl~LE-F~~LS~LTGd~~Y~~~a~r~~~~l~~~~~~~~~~~GL~p~~ 222 (511)
T 1dl2_A 144 TQTGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQME-FKYLAYLTGNRTYWELVERVYEPLYKNNDLLNTYDGLVPIY 222 (511)
T ss_dssp SSSSCCCSEEETTTCCEECCSSGGGCEEHHHHSSCHHH-HHHHHHHHTCHHHHHHHHTTHHHHHHHHTHHHHHTTCCBSE
T ss_pred CCCCCCCceeecccCCCCCCCCCCcccccccccceeee-HHHHHHHHCChHHHHHHHHHHHHHHhcccccCCCCCCcceE
Confidence 8999998888888764211100 00000001 234 45789999999999999999999988631 2234 3333
Q ss_pred ccCCCCCC-------CCCcchHHHHHHHHHHHHhcCCC
Q 008341 483 KDVNTGDK-------DNMMQSFFLAETLKYLYLLFSPT 513 (569)
Q Consensus 483 ~dV~~~~~-------~D~meSFflaETLKYLYLLFsd~ 513 (569)
-|+.++.. .-...||+ |-|==-|+++.|+
T Consensus 223 i~~~tg~~~~~~~~lGa~~DS~Y--EYLlK~~il~~d~ 258 (511)
T 1dl2_A 223 TFPDTGKFGASTIRFGSRGDSFY--EYLLKQYLLTHET 258 (511)
T ss_dssp ECTTTCCBCSCCBCSSTTTHHHH--HHHHHHHHHHCCH
T ss_pred EcCCCCCccCCeeeecCCCCcHH--HHHHHHHHhcCCH
Confidence 35544321 34556774 4432234555443
No 23
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=95.54 E-value=0.62 Score=49.12 Aligned_cols=252 Identities=10% Similarity=-0.006 Sum_probs=132.9
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHHhCCchHHHHHHHHHHHHh
Q 008341 197 FLEKARDIADRLLPAWNTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQRTGDPKYRQKAEKVIVELN 276 (569)
Q Consensus 197 lL~KA~eLadrLlpAFdTptGiP~~~iNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lTGd~kY~~~a~~i~~~L~ 276 (569)
|.+.+..|.+.-..++|.. |. ..++.. |.+.+.. .--+---|-+.-=|....+ ||++.|.+.|+++.+.|.
T Consensus 13 l~~~~~~ll~f~~~~~d~~-GF--~~ld~~-g~~~~~~----~k~~~~nar~i~~~a~a~~-~g~~~~l~~A~~~~~fl~ 83 (421)
T 2zbl_A 13 LEQETDRIFNFGKNAVVPT-GF--GWLGNK-GQIKEEM----GTHLWITARMLHVYSVAAS-MGRPGAYDLVDHGIKAMN 83 (421)
T ss_dssp HHHHHHHHHHHHGGGEETT-EE--CCBCTT-SCBCGGG----CEEHHHHHHHHHHHHHHHH-TTCTTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCcCCC-Cc--ceECCC-CCCCCCc----hhhHHHHHHHHHHHHHHHH-cCChhHHHHHHHHHHHHH
Confidence 4456666666666677744 63 233332 3221110 0111112222333555555 999999999999999999
Q ss_pred hc-CCC--CCCcceeecCCCCCCCCCeeeecccCc--hHH-HHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHhccccCC
Q 008341 277 KT-FPA--DGLLPIYISPDRGTPSYSTITFGAMGD--SFY-EYLLKVWIQGNKTSAVKPYRDMWETSMKGLLSLVRRSTP 350 (569)
Q Consensus 277 ~~-~~~--~GL~p~~id~~tg~~~~~~~t~Ga~~D--SyY-EYLLK~~iL~g~~~~~~~~~~my~~a~~~i~~ll~~~~~ 350 (569)
+. ... .|++ -.+|.+. ... -..+.+ .|. .-++- |..+|+.+ +.+.=.+..+.+.+++.....
T Consensus 84 ~~~~D~~~GG~~-~s~d~dg-~~~-----~~k~lyd~Af~i~al~~-~~~tg~~~----~l~~a~~~~~~l~~~~~d~~~ 151 (421)
T 2zbl_A 84 GALRDKKYGGWY-ACVNDQG-VVD-----ASKQGYQHFFALLGAAS-AVTTGHPE----ARKLLDYTIEVIEKYFWSEEE 151 (421)
T ss_dssp TTTBCTTTSSBC-SEEETTE-EEE-----CCEEHHHHHHHHHHHHH-HHTTTCTT----HHHHHHHHHHHHHHHTEETTT
T ss_pred HhccCcCCCeEE-EEeCCCC-CcC-----CchhHHHHHHHHHHHHH-HHHhCCcc----HHHHHHHHHHHHHHHhccCCC
Confidence 84 222 2455 4455332 111 111111 111 11222 66777655 556666666677766543322
Q ss_pred CCCeeeeccCCCcc--cccccccccccchhhhhhcCCCCCCCchHHHHHHHHHHHHHHHhhccCCCCccceeEeecCCCc
Q 008341 351 SSFTYICEKNGDSL--IDKMDELACFAPGMIALGSSGYGPGDSEKFLSLAEELAWTCYNFYQSTPTKLAGENYFFRDGQD 428 (569)
Q Consensus 351 ~~~~~v~~~~g~~~--~~~m~hLsCF~pGmlaLGa~~~~~~~~~~~l~lA~~L~~tC~~~y~~t~tGl~PE~~~f~~~~~ 428 (569)
+++........... ...+..+...+-+++.++... ..+++++.|+++.+.|.......++|..+|.|. .+..
T Consensus 152 Ggf~~~~d~d~~~~~~~~~~n~~m~~~~al~~l~~~t----gd~~~~~~A~~~~~~~~~~~~~~~~~~l~~~f~--~~~~ 225 (421)
T 2zbl_A 152 QMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVT----HDKKWLDRALRIASVIIHDVARNGDYRVNEHFD--SQWN 225 (421)
T ss_dssp TEECCEECTTSCSBCSCEEHHHHHHHHHHHHHHHHTT----CCTHHHHHHHHHHHHHCCCCCGGGTTCCCCEEC--TTSC
T ss_pred CCeeeeecCCCCcccccCCCcHHHHHHHHHHHHHHhh----CCHHHHHHHHHHHHHHHHHhccCCCCchhhhcC--Cccc
Confidence 22211111111001 111222222244445555432 246899999999998876555556788888863 3211
Q ss_pred ----cccccCCCCCc-----hhH-HHHHHH---HHhhc---Cc--c-hHHHHHHHHHHHHHHHccc
Q 008341 429 ----MSVGTSWNILR-----PET-VESLFY---LWRLT---GN--K-TYKEWGWNIFQAFEKNSRI 475 (569)
Q Consensus 429 ----~~~~~~~y~LR-----PE~-IESlfy---LyR~T---GD--~-~yre~gW~if~ai~k~~r~ 475 (569)
....++....| |-. ||..+. ++++| || + .|.++|-++++.+.++...
T Consensus 226 ~~~~~~~dd~~~r~~~~~~~pgh~iE~~wlLl~~~~~~~~~~~~~~~~~l~~A~~l~~~~~~~g~d 291 (421)
T 2zbl_A 226 PIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHATIRDAWA 291 (421)
T ss_dssp BCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHBS
T ss_pred cchhccCCCcccccccCCCCCChHHHHHHHHHHHHHHcccccccchHHHHHHHHHHHHHHHHHhcC
Confidence 01122334443 533 776654 47888 67 7 8999999999999777654
No 24
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=95.51 E-value=0.051 Score=59.10 Aligned_cols=168 Identities=14% Similarity=0.118 Sum_probs=100.3
Q ss_pred hhHHHHHHHHHHhhcCCCC--Ccc------------ccccchhhhhccccceee-ccCCChhHHHHHHHHHHHHhhccc-
Q 008341 150 DYSFSSEFMWIANSLDFNK--SYD------------ASVFETTIRVVGGLLSAY-DLSGDKVFLEKARDIADRLLPAWN- 213 (569)
Q Consensus 150 ~eEF~~A~~~V~~~ldF~~--~~~------------vsvFEttIR~LGGLLSAY-~LSgd~~lL~KA~eLadrLlpAFd- 213 (569)
.+-|++|++-|.+++-+.. ... ...++.-.=++||+++-- ++.+.+..++.|++|++--.-+++
T Consensus 253 ~~m~~~a~~~i~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~G~~aLgg~~~~~~~~~~~a~~l~~tC~~~y~~ 332 (475)
T 2ri9_A 253 KDRWVLAAESTIKHLKSHPKSRPDLTFLSSYSNRNYDLSSQHLTCFDGGSFLLGGTVLDRQDFIDFGLELVDGCEATYNS 332 (475)
T ss_dssp HHHHHHHHHHHHHHTEECCSSCTTCCEECEEETTEEECEEETGGGGHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhccCCCCCCCceEEEeccCCccccccchHHHhHHHHHHhcccccccHHHHHHHHHHHHHHHHHHHh
Confidence 4568889998888765542 111 112333333556654311 233456778888888888777775
Q ss_pred CCCCCCcceeecCCCCCCCC--CCCC-CCccccccccch--hh----HHHHHHHhCCchHHHHHHHHHHHHhhcCCCCCC
Q 008341 214 TRTGIPYNVINLAHGNPHNP--SWTG-GESILADSGTEQ--LE----LIALSQRTGDPKYRQKAEKVIVELNKTFPADGL 284 (569)
Q Consensus 214 TptGiP~~~iNl~~g~~~~~--~~~~-~~s~lAe~GSl~--LE----F~~LS~lTGd~kY~~~a~~i~~~L~~~~~~~GL 284 (569)
||+|+.--.+++..+..... .|.. ....... +... -| .-+|-|+||||+|.+.+-++++.|.+....++=
T Consensus 333 ~~tGl~PE~~~~~~~~~~~~~~~~~~~~g~~~~~-~~y~LRPE~iES~fylyR~TgD~~yr~~gw~~f~ai~k~~rt~~G 411 (475)
T 2ri9_A 333 TLTKIGPDSWGWDPKKVPSDQKEFYEKAGFYISS-GSYVLRPEVIESFYYAHRVTGKEIYRDWVWNAFVAINSTCRTDSG 411 (475)
T ss_dssp SSSSCCCSEEECCTTCCCGGGHHHHHHHSCEEEE-CCBCSCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCSSS
T ss_pred cccCCCCcEEEeecCcccccccccccCCCceecc-cccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHccccC
Confidence 69998777777764432110 0000 0000011 1111 23 357999999999999999999999995544444
Q ss_pred cceeecCCC---CCCCCCeeeecccCchHH--HHHHHHHHhcCCCC
Q 008341 285 LPIYISPDR---GTPSYSTITFGAMGDSFY--EYLLKVWIQGNKTS 325 (569)
Q Consensus 285 ~p~~id~~t---g~~~~~~~t~Ga~~DSyY--EYLLK~~iL~g~~~ 325 (569)
+...-|+.+ ++.. -.-.||+ |-|-=.|+|+.+.+
T Consensus 412 ~a~i~dV~~~~~~~~~-------D~meSF~laETLKYlYLLFsd~~ 450 (475)
T 2ri9_A 412 FAAVSDVNKANGGSKY-------DNQESFLFAEVMKYSYLAHSEDA 450 (475)
T ss_dssp BCCBSCTTSGGGSSBB-------SCCCTHHHHTHHHHHHHTTSCCC
T ss_pred CcccccccCCCCCCcC-------CccchHHHHHHHHHHHhcccCCc
Confidence 555556655 3222 3357887 76666688888766
No 25
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=95.19 E-value=0.1 Score=56.74 Aligned_cols=219 Identities=16% Similarity=0.174 Sum_probs=127.5
Q ss_pred HHHHHHHHHHHHhhcCCCCCCcceeecCCCCCCCCCeeeeccc-CchHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHH
Q 008341 264 YRQKAEKVIVELNKTFPADGLLPIYISPDRGTPSYSTITFGAM-GDSFYEYLLKVWIQGNKTSAVKPYRDMWETSMKGLL 342 (569)
Q Consensus 264 Y~~~a~~i~~~L~~~~~~~GL~p~~id~~tg~~~~~~~t~Ga~-~DSyYEYLLK~~iL~g~~~~~~~~~~my~~a~~~i~ 342 (569)
..++|++++.+-|+.....+.--+-+.|-+|..... -.+|+. +-+.-+-|==.||++-+ +-|++|++-|.
T Consensus 20 rr~~Vk~~F~haw~~Y~~~Awg~DEl~P~S~~g~~~-~~fg~~~g~TlVDsLDTL~IMgl~--------~Ef~~A~~~v~ 90 (478)
T 1nxc_A 20 KRAKIKEMMTHAWNNYKRYAWGLNELKPISKEGHSS-SLFGNIKGATIVDALDTLFIMGMK--------TEFQEAKSWIK 90 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSSEEETTTTEEECC-GGGTTCCCHHHHHHHHHHHHTTCH--------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccccccccCCCcCC-CccCCcccchheecccceeecCCH--------HHHHHHHHHHH
Confidence 457888899998884322222224556666553321 135654 66666777778888642 46889999888
Q ss_pred HhccccCCCCCeeeeccCCCcccccccccccccchhhhhhcCCCCCCCchHHHHHHHHHHHHHHHhhccCCCCccceeEe
Q 008341 343 SLVRRSTPSSFTYICEKNGDSLIDKMDELACFAPGMIALGSSGYGPGDSEKFLSLAEELAWTCYNFYQSTPTKLAGENYF 422 (569)
Q Consensus 343 ~ll~~~~~~~~~~v~~~~g~~~~~~m~hLsCF~pGmlaLGa~~~~~~~~~~~l~lA~~L~~tC~~~y~~t~tGl~PE~~~ 422 (569)
+.+..... . ..+.++----++||+|. |+... ..+.+++.|.+|++--.-.++ ||||++--.++
T Consensus 91 ~~l~f~~~-~-----------~vsvFETtIR~LGGLLS--Ay~Ls--gd~~lL~kA~dLad~LlpAFd-TptgiP~~~vn 153 (478)
T 1nxc_A 91 KYLDFNVN-A-----------EVSVFEVNIRFVGGLLS--AYYLS--GEEIFRKKAVELGVKLLPAFH-TPSGIPWALLN 153 (478)
T ss_dssp HHCCCCCS-S-----------EEEHHHHHHHHHHHHHH--HHHHH--CCHHHHHHHHHHHHHHGGGGC-SSSSCCCSEEE
T ss_pred hhcCccCC-C-----------ccchhheehhhhhhhhh--hhhcc--CCHHHHHHHHHHHHHHHHhhc-CCCCCCcceee
Confidence 74433211 0 11112222235777755 22221 235789999999998888885 79999888888
Q ss_pred ecCCCccccccCCCCCchhHHHH------HHHHHhhcCcchHHHHHHHHHHHHHHHcccCcC-ccccccCCCCCC-----
Q 008341 423 FRDGQDMSVGTSWNILRPETVES------LFYLWRLTGNKTYKEWGWNIFQAFEKNSRIESG-YVGLKDVNTGDK----- 490 (569)
Q Consensus 423 f~~~~~~~~~~~~y~LRPE~IES------lfyLyR~TGD~~yre~gW~if~ai~k~~r~~~G-ya~l~dV~~~~~----- 490 (569)
+..|......... .-..-+.|. .=+|-|+||||+|.+.+..+.+.+.+.-+. .| +...-|+.++..
T Consensus 154 l~~g~~~~~~~~~-~~~s~lAe~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~~l~~~~~~-~GL~p~~i~~~tg~~~~~~~ 231 (478)
T 1nxc_A 154 MKSGIGRNWPWAS-GGSSILAEFGTLHLEFMHLSHLSGDPVFAEKVMKIRTVLNKLDKP-EGLYPNYLNPSSGQWGQHHV 231 (478)
T ss_dssp TTTCCEECCTTSG-GGCEEHHHHTTCHHHHHHHHHHHCCTHHHHHHHHHHHHHHHSCCG-GGCCCSEECTTTCCBCSCEE
T ss_pred cccccCCCCcccC-CCCcccccccchhhhHHHHHHHHCChHHHHHHHHHHHHHHhcCCC-CCccccccCCCCCCccCcee
Confidence 8776321100000 000112222 357899999999999999999999876543 34 333345544331
Q ss_pred --CCCcchHHHHHHHHHHHHhcCC
Q 008341 491 --DNMMQSFFLAETLKYLYLLFSP 512 (569)
Q Consensus 491 --~D~meSFflaETLKYLYLLFsd 512 (569)
.-...||+ |-|==-|+++..
T Consensus 232 ~~Ga~~DS~Y--EYLlK~~il~g~ 253 (478)
T 1nxc_A 232 SVGGLGDSFY--EYLLKAWLMSDK 253 (478)
T ss_dssp CSSTTTHHHH--HHHHHHHHHTTT
T ss_pred eecCCCchHH--HHHHHHHHHcCC
Confidence 34456664 433223566654
No 26
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=94.99 E-value=1.3 Score=46.05 Aligned_cols=247 Identities=15% Similarity=0.109 Sum_probs=126.5
Q ss_pred HHHHHHHh-hcccCCCCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHHh---CCchHHHHHHHHHHHHhh
Q 008341 202 RDIADRLL-PAWNTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQRT---GDPKYRQKAEKVIVELNK 277 (569)
Q Consensus 202 ~eLadrLl-pAFdTptGiP~~~iNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lT---Gd~kY~~~a~~i~~~L~~ 277 (569)
.++....+ ..||...|=.+..++. .|.+. +. ...+---|-+..-|..+.+++ |++.|.+.|+++.+.|.+
T Consensus 20 ~~~l~~w~~~~~D~~~GGf~~~~~~-dg~~~-~~----~k~l~~nar~l~~~a~a~~~~~~~~~~~~l~~A~~~~~fl~~ 93 (402)
T 1fp3_A 20 DRVMAFWLEHSHDREHGGFFTCLGR-DGRVY-DD----LKYVWLQGRQVWMYCRLYRKLERFHRPELLDAAKAGGEFLLR 93 (402)
T ss_dssp HHHHHHHHHHSBCTTTSSBCCCBCT-TSCBS-CC----CEEHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhccCCCCCCCCEeeEECC-CCCCC-CC----ccchhhhHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHH
Confidence 34455556 5788777766666664 34433 21 122222333455677777876 999999999999999998
Q ss_pred c-CCC-C--CCcceeecCCCCCCCCCeeeecccCc--hHH-HHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHhccccCC
Q 008341 278 T-FPA-D--GLLPIYISPDRGTPSYSTITFGAMGD--SFY-EYLLKVWIQGNKTSAVKPYRDMWETSMKGLLSLVRRSTP 350 (569)
Q Consensus 278 ~-~~~-~--GL~p~~id~~tg~~~~~~~t~Ga~~D--SyY-EYLLK~~iL~g~~~~~~~~~~my~~a~~~i~~ll~~~~~ 350 (569)
. ... . |++ ..+|.+. ... ......+ .|+ .-++-.|..+|+.+ +++.=.+.++.+.+++... +
T Consensus 94 ~~~d~~gg~g~~-~s~d~dg-~~~----~~~~~lyd~af~~~a~~~~~~atgd~~----~~~~A~~l~~~~~~~~~d~-~ 162 (402)
T 1fp3_A 94 HARVAPPEKKCA-FVLTRDG-RPV----KVQRSIFSECFYTMAMNELWRVTAEAR----YQSEAVDMMDQIVHWVRED-P 162 (402)
T ss_dssp HTBSSTTSCCBC-SEECTTS-CEE----ECCSSSHHHHHHHHHHHHHHHHHCCHH----HHHHHHHHHHHHHHHHHTC-G
T ss_pred hccCcCCCCceE-EEECCCC-Ccc----ccccchHHHHHHHHHHHHHHHHhCCHH----HHHHHHHHHHHHHHHhccC-C
Confidence 4 332 2 455 5566433 221 1112211 222 12344556677544 5554455555555544311 2
Q ss_pred CCCeeeeccCCCccccccc---ccccccchhhhhhcCCCCCCCchHHHHHHHHHHHHHHHhhccCCCCccceeEeecCCC
Q 008341 351 SSFTYICEKNGDSLIDKMD---ELACFAPGMIALGSSGYGPGDSEKFLSLAEELAWTCYNFYQSTPTKLAGENYFFRDGQ 427 (569)
Q Consensus 351 ~~~~~v~~~~g~~~~~~m~---hLsCF~pGmlaLGa~~~~~~~~~~~l~lA~~L~~tC~~~y~~t~tGl~PE~~~f~~~~ 427 (569)
.++ |-......+....+. |+. ..++++. ..+... ...+++.++++.+.+... ....+|..+|.++- +++
T Consensus 163 ~G~-f~~~~~~~~~~~~~~~~m~~~---~~~l~l~-~l~~~~-~~~~~~~a~~~~~~~~~~-~~~~~~~~~e~~d~-dw~ 234 (402)
T 1fp3_A 163 SGL-GRPQLPGAVASESMAVPMMLL---CLVEQLG-EEDEEL-AGRYAQLGHWCARRILQH-VQRDGQAVLENVSE-DGE 234 (402)
T ss_dssp GGG-CCCCCTTSCCEEETHHHHHHH---HHHHHHH-TTCHHH-HHHTHHHHHHHHHHHHTT-EETTTTEECSEEET-TSC
T ss_pred Ccc-cCccccCccCCCCcchHHHHH---HHHHHHH-HHHHhc-CcHHHHHHHHHHHHHHHH-hCcCCCeEEEEECC-CCC
Confidence 232 211111111001110 111 1122210 000000 123667777777777666 44456777887652 111
Q ss_pred ccccccCCCCCchh-HHHH---HHHHHhhcCcchHHHHHHHHHHHH-HHHcc
Q 008341 428 DMSVGTSWNILRPE-TVES---LFYLWRLTGNKTYKEWGWNIFQAF-EKNSR 474 (569)
Q Consensus 428 ~~~~~~~~y~LRPE-~IES---lfyLyR~TGD~~yre~gW~if~ai-~k~~r 474 (569)
. .+.....+.+|- -||. +.-++++|||+.|.+.|-++++.+ .++..
T Consensus 235 ~-~~~~~g~~~~pgh~ie~~wlL~~a~~~~~~~~~l~~A~~~~~~~~~~~~~ 285 (402)
T 1fp3_A 235 E-LSGCLGRHQNPGHALEAGWFLLRHSSRSGDAKLRAHVIDTFLLLPFRSGW 285 (402)
T ss_dssp B-CCHHHHHEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTHHHHHHHB
T ss_pred c-cCCCCCCCCCCCcHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHhc
Confidence 1 000011234554 4885 555577799999999999999998 55543
No 27
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=94.60 E-value=0.044 Score=59.96 Aligned_cols=171 Identities=13% Similarity=0.030 Sum_probs=98.7
Q ss_pred hhHHHHHHHHHHhhcCCCC--Ccc------------ccccchhhhhcccccee-eccCCChhHHHHHHHHHHHHhhccc-
Q 008341 150 DYSFSSEFMWIANSLDFNK--SYD------------ASVFETTIRVVGGLLSA-YDLSGDKVFLEKARDIADRLLPAWN- 213 (569)
Q Consensus 150 ~eEF~~A~~~V~~~ldF~~--~~~------------vsvFEttIR~LGGLLSA-Y~LSgd~~lL~KA~eLadrLlpAFd- 213 (569)
.+-|++|++-|.+++-+.. ... ...++.-.=++||+++- -++-+++..++.|++|++--.-+++
T Consensus 266 ~~m~~~a~~~i~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~G~~aLgg~~~~~~~~~~~a~~L~~tC~~~y~~ 345 (503)
T 1hcu_A 266 KDRWVLGADSTIGHLGSHPSTRKDLTFLSSYNGQSTSPNSGHLASFGGGNFILGGILLNEQKYIDFGIKLASSYFGTYTQ 345 (503)
T ss_dssp HHHHHHHHHHHHHHTEECBTTCTTCCEECEEETTEEESEEEGGGGGHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhccCCCCCCCceEEEeccCCccccccchhhhhhhHHHHhcCcccccHHHHHHHHHHHHHHHHHHHh
Confidence 4568899998888775542 111 11233333455665431 1233466778888888888777775
Q ss_pred CCCCCCcceeecCCCCCCC-CCCCC-C-------Cccccccccch--hhH----HHHHHHhCCchHHHHHHHHHHHHhhc
Q 008341 214 TRTGIPYNVINLAHGNPHN-PSWTG-G-------ESILADSGTEQ--LEL----IALSQRTGDPKYRQKAEKVIVELNKT 278 (569)
Q Consensus 214 TptGiP~~~iNl~~g~~~~-~~~~~-~-------~s~lAe~GSl~--LEF----~~LS~lTGd~kY~~~a~~i~~~L~~~ 278 (569)
||+||.--.+++..+.+.. +.-.. + .....+ +... -|+ -+|-|+||||+|.+.+-++++.|.+.
T Consensus 346 ~~tGl~PE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~y~LRPE~iES~fylyR~TgD~~yre~gw~if~ai~k~ 424 (503)
T 1hcu_A 346 TASGIGPEGFAWVDSVTGAGGSPPSSQSGFYSSAGFWVTA-PYYILRPETLESLYYAYRVTGDSKWQDLAWEALSAIEDA 424 (503)
T ss_dssp SSSSCCCSEEECCBTTTCCSCCCCGGGHHHHHHHSCEEEE-CCBCCCCHHHHHHHHHHHHHCBHHHHHHHHHHHHHHHHH
T ss_pred CccCCCceEEEeecCccccccCCcccccccccCCCceecc-ccccCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 6999977677775443110 00000 0 000111 1111 233 46999999999999999999999994
Q ss_pred CCCCCCcceeecCCCCCCCCCeeeecccCchHH--HHHHHHHHhcCCCC
Q 008341 279 FPADGLLPIYISPDRGTPSYSTITFGAMGDSFY--EYLLKVWIQGNKTS 325 (569)
Q Consensus 279 ~~~~GL~p~~id~~tg~~~~~~~t~Ga~~DSyY--EYLLK~~iL~g~~~ 325 (569)
...++=+...-|+.+..- -...-.-.||+ |-|-=.|+|+.+.+
T Consensus 425 ~r~~~Gya~i~dV~~~~~----~~~~D~meSF~laETLKYlYLLFsd~~ 469 (503)
T 1hcu_A 425 CRAGSAYSSINDVTQANG----GGASDDMESFWFAEALKYAYLIFAEES 469 (503)
T ss_dssp HEETTEECCBSCTTSTTC----SCBCSCBCHHHHHTHHHHHHHHHSCCC
T ss_pred HhhccCCcccccccCCCC----CCcCCccchHHHHHHHHHHheeccCCc
Confidence 333333444445554110 11223357887 76666688998766
No 28
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.21 E-value=0.28 Score=52.87 Aligned_cols=209 Identities=10% Similarity=0.028 Sum_probs=115.6
Q ss_pred hhhhccccceeeccCCChhHHHHHHHHHHHHhhccc-CCCCCCcceeecCCCCCCCCCCCCCCccccccccchhhH-HHH
Q 008341 178 TIRVVGGLLSAYDLSGDKVFLEKARDIADRLLPAWN-TRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLEL-IAL 255 (569)
Q Consensus 178 tIR~LGGLLSAY~LSgd~~lL~KA~eLadrLlpAFd-TptGiP~~~iNl~~g~~~~~~~~~~~s~lAe~GSl~LEF-~~L 255 (569)
.-.++=+|+-+|.+++|+.+++.|.++||.|+.-|. |+.|.-+.. .+ . ......+.--|.+.| ..+
T Consensus 147 ~g~~~~~Li~lY~~T~d~~yl~~a~~~ad~L~~~~pRt~~Ggf~h~------~~-~-----~~q~WiD~lyM~~pfla~~ 214 (445)
T 3k11_A 147 AGAVCTAMIKLRLKDESLPVDGLIQNYFDFIINKEYRLADGTFARN------RP-Q-----RNTLWLDDMFMGIPAVAQM 214 (445)
T ss_dssp THHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHTSCBCTTCCBCBC------SS-S-----TTEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHcCCCCCCCceeec------CC-C-----CCceEecchhhHHHHHHHH
Confidence 344556789999999999999999999999999884 777766521 11 1 112334433345555 458
Q ss_pred HHHhCCch--HHHHHHHHHHHHhh-cC-CCCCCcceeecCCCCCCCCCeeeecccCchHHHH-HHHHHHhcCCC-CCcch
Q 008341 256 SQRTGDPK--YRQKAEKVIVELNK-TF-PADGLLPIYISPDRGTPSYSTITFGAMGDSFYEY-LLKVWIQGNKT-SAVKP 329 (569)
Q Consensus 256 S~lTGd~k--Y~~~a~~i~~~L~~-~~-~~~GL~p~~id~~tg~~~~~~~t~Ga~~DSyYEY-LLK~~iL~g~~-~~~~~ 329 (569)
+++|||++ |.+.|.+-+....+ .+ +..||+-.-.+.+.+.. ....|| +|..-|=| |...+-...+. ..-..
T Consensus 215 ~~~tgd~~~~y~d~A~~q~~~~~~~l~D~~tGL~~Hg~~~~~~~~--~~~~Wa-RGnGW~~~gl~~~l~~lp~~~~~r~~ 291 (445)
T 3k11_A 215 SRYDKEAKNKYLAEAVKQFLQFADRMFIPEKGLYRHGWVESSTDH--PAFCWA-RANGWALLTACELLDVLPEDYPQRPK 291 (445)
T ss_dssp HHHCGGGHHHHHHHHHHHHHHHHHHHEETTTTEECSEEETTCSSC--CCCCBH-HHHHHHHHHHHHHHHHSCTTCTTHHH
T ss_pred HHHHCCcchHHHHHHHHHHHHHHHhcccCCCCCEeeeecCCCCCC--Ccceec-ccchHHHHHHHHHHHhcccccccHHH
Confidence 99999999 99988887666665 22 45677766555433211 111121 12222111 22223222211 11144
Q ss_pred HHHHHHHHHHHHHHhccccCCCCCeeeeccCCCcccccccccccccchhhhhhcCCCCCCCchHHHHHHHHHHHHHHH
Q 008341 330 YRDMWETSMKGLLSLVRRSTPSSFTYICEKNGDSLIDKMDELACFAPGMIALGSSGYGPGDSEKFLSLAEELAWTCYN 407 (569)
Q Consensus 330 ~~~my~~a~~~i~~ll~~~~~~~~~~v~~~~g~~~~~~m~hLsCF~pGmlaLGa~~~~~~~~~~~l~lA~~L~~tC~~ 407 (569)
+.+.+.+.++++.++.. ++++-+.. ..........+.-++|+-||+- |.+..- .+++.+...|++..++...
T Consensus 292 l~~~~~~~a~~l~~~Q~---~~G~W~~v-ld~~~~y~EsSaTAmfaygllk-gvr~G~-Ld~~~Y~~~A~ka~~~L~~ 363 (445)
T 3k11_A 292 VMDYFRAHVRGVTALQS---GEGFWHQL-LDCNDSYLETSATAIYVYCLAH-AINKGW-IDAIAYGPVAQLGWHAVAG 363 (445)
T ss_dssp HHHHHHHHHHHHHTTCC---TTSCEESB-TTCTTSCEEHHHHHHHHHHHHH-HHHHTS-SCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCC---CCCchhhc-cCCCCCCCCccHHHHHHHHHHH-HHHcCC-CCHHHHHHHHHHHHHHHHH
Confidence 66777777777776542 24442211 1111111233334455556544 333211 1245788888887777653
No 29
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=92.02 E-value=3 Score=43.68 Aligned_cols=196 Identities=12% Similarity=0.082 Sum_probs=109.1
Q ss_pred ccchhhHHHHHHHhCCchHHHHHHHHHHHHhhcCCCCCCcceeecCCCCCCCCCeeeecccCchHHHHHHHHHHhcCCCC
Q 008341 246 GTEQLELIALSQRTGDPKYRQKAEKVIVELNKTFPADGLLPIYISPDRGTPSYSTITFGAMGDSFYEYLLKVWIQGNKTS 325 (569)
Q Consensus 246 GSl~LEF~~LS~lTGd~kY~~~a~~i~~~L~~~~~~~GL~p~~id~~tg~~~~~~~t~Ga~~DSyYEYLLK~~iL~g~~~ 325 (569)
|-+.--+..+.++|||++|.+.|++.++.+.+.... . .|.+++ + .++ -|+..|-++|+..
T Consensus 71 G~~~~gl~~~ye~Tgd~~y~~~a~~~~~~~~~~~~~---~---~n~D~~----------~---~~~-~l~~lY~~Tgd~~ 130 (382)
T 3pmm_A 71 GVGLYGIYQYYQQTGDIEMRDIIDRWFADRFAEGAT---T---KNVNTM----------A---PFL-TLAYRFEETGRMA 130 (382)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC---C---CCTTTT----------T---THH-HHHHHHHHHCCGG
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHcCCCC---c---Ccccch----------H---HHH-HHHHHHHHhCCHH
Confidence 445566888999999999999999999877663211 0 122221 1 122 3578899999754
Q ss_pred CcchHHHHHHHHHHHHHHhccccCCCCCeeeeccCCCccccccccccccc--chhhhhhcCCCCCCCchHHHHHHHHHHH
Q 008341 326 AVKPYRDMWETSMKGLLSLVRRSTPSSFTYICEKNGDSLIDKMDELACFA--PGMIALGSSGYGPGDSEKFLSLAEELAW 403 (569)
Q Consensus 326 ~~~~~~~my~~a~~~i~~ll~~~~~~~~~~v~~~~g~~~~~~m~hLsCF~--pGmlaLGa~~~~~~~~~~~l~lA~~L~~ 403 (569)
|++.-.++.+.+.+...+...+++..........-..+.| .||. |.+.-++.. . +.+++++.|..-..
T Consensus 131 ----Yl~~a~~~ad~L~~~~~r~~~Ggf~~~~~~~~~~~~~WiD--gl~M~~p~La~~~~~-t---gd~~y~d~A~~q~~ 200 (382)
T 3pmm_A 131 ----YLPWLESWAEWAMHEMPRTEQGGMQHMTLAEENHQQMWDD--TLMMTVLPLAKIGKL-L---NRPQYVEEATYQFL 200 (382)
T ss_dssp ----GHHHHHHHHHHHHHTSCBCGGGCBCCCCSSCCCTTEEETT--HHHHTHHHHHHHHHH-T---TCHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHhhCCCCcCCCeeeecCCCCCCCcEEec--chhhhHHHHHHHHHH-H---CCHHHHHHHHHHHH
Confidence 6655555555554322222222222111000000011222 1332 222223322 2 25789999977777
Q ss_pred HHHHhhccCCCCccceeEeecCCCcc---c--cccCCCCCchhHHHHHHHHHhh-------cCcchHHHHHHHHHHHHHH
Q 008341 404 TCYNFYQSTPTKLAGENYFFRDGQDM---S--VGTSWNILRPETVESLFYLWRL-------TGNKTYKEWGWNIFQAFEK 471 (569)
Q Consensus 404 tC~~~y~~t~tGl~PE~~~f~~~~~~---~--~~~~~y~LRPE~IESlfyLyR~-------TGD~~yre~gW~if~ai~k 471 (569)
++.+......||+--..+++...+.. . -+..|++ =.+=-++|. |+++.|.++.-++..++.+
T Consensus 201 ~~~~~l~D~~tGl~~h~~~~~~~~~~~~~~WaRG~gW~~------~gl~~~l~~l~~p~~~~~~~~~~~~~~~~a~~~~~ 274 (382)
T 3pmm_A 201 LHVQNLMDRETGLWFHGWNYEGRHNFARARWARGNSWLT------MVIPDFLELVDLPEGNAVRRYLITVLDAQIAALAE 274 (382)
T ss_dssp HHHHHHBCTTTSCBCSEEETTTTBCTTCCCBHHHHHHHH------HHHHHHHHHHCCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHccCCCCCCeeeeccCCCCCCCCcceecccccHHH------HHHHHHHHhhcCCcchhhHHHHHHHHHHHHHHHHH
Confidence 77776666678998777776643210 0 1233321 112222333 7788999999999999999
Q ss_pred HcccCcC
Q 008341 472 NSRIESG 478 (569)
Q Consensus 472 ~~r~~~G 478 (569)
+-. +.|
T Consensus 275 ~q~-~~G 280 (382)
T 3pmm_A 275 CQD-DSG 280 (382)
T ss_dssp HCC-TTS
T ss_pred cCC-CCC
Confidence 865 556
No 30
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=87.30 E-value=1.2 Score=47.99 Aligned_cols=100 Identities=20% Similarity=0.313 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHhhcccC------CCCCCcceeecCCCCCCCCCCCCC-Cccccccccch---hhHHHHHHHhCCchHHH
Q 008341 197 FLEKARDIADRLLPAWNT------RTGIPYNVINLAHGNPHNPSWTGG-ESILADSGTEQ---LELIALSQRTGDPKYRQ 266 (569)
Q Consensus 197 lL~KA~eLadrLlpAFdT------ptGiP~~~iNl~~g~~~~~~~~~~-~s~lAe~GSl~---LEF~~LS~lTGd~kY~~ 266 (569)
+|..-.+-+|.++..... ||-+-..-+|..++++....++.| ...++-+.|=| ==+..||.+||||+|.+
T Consensus 2 ~L~~v~~y~d~vl~~~~s~~~g~~~TPLlADG~D~~t~~pV~W~~pdg~~~~iSNfAsQQN~lR~L~~LS~lTgd~~Y~q 81 (543)
T 2v8i_A 2 RLTVVKQYVDNVLNKASDTYHGDKPSPLLADGVDPRTGQQLEWIFPDGRRAVLSNFSAQQNLMRVMSGLSQLSGDPRYQK 81 (543)
T ss_dssp HHHHHHHHHHHHHHHTBCCSSTTSCCSCBCSEECTTTCCBCEEECTTSCEEEEECGGGCHHHHHHHHHHHHHHCCTHHHH
T ss_pred hHHHHHHHHHHHHHhccCcccCCCCCceeccccccCCCCceeeeCCCCCccccccHHHHHHHHHHHHHHhhccCCHHHHH
Confidence 355556667777665543 233334566777766644333322 33455555443 33567999999999999
Q ss_pred HHHHHHHHHhhc-CCCCCCcc----eeecCCCCCC
Q 008341 267 KAEKVIVELNKT-FPADGLLP----IYISPDRGTP 296 (569)
Q Consensus 267 ~a~~i~~~L~~~-~~~~GL~p----~~id~~tg~~ 296 (569)
.|..+.+-.... ....||+= .+||-+|.+.
T Consensus 82 ~A~~~~~yf~dh~vd~sGL~~WGGHrFi~L~tl~~ 116 (543)
T 2v8i_A 82 RAEDIVRYHFQNYQDPSGLLYWGGHRFVDLKTLQP 116 (543)
T ss_dssp HHHHHHHHHHHHSBCTTSCBSCSTTCEEETTTCCE
T ss_pred HHHHHHHHHHHcccCCCCceeecCceeEeccccCc
Confidence 999999999884 35567752 4677666553
No 31
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=84.50 E-value=0.59 Score=50.33 Aligned_cols=254 Identities=15% Similarity=0.108 Sum_probs=143.1
Q ss_pred hccccceeeccCCChhHHHHHHHHHHHHh---hcccC---CCC-C--CcceeecCCCCCCCCCCCCCCccccccccchhh
Q 008341 181 VVGGLLSAYDLSGDKVFLEKARDIADRLL---PAWNT---RTG-I--PYNVINLAHGNPHNPSWTGGESILADSGTEQLE 251 (569)
Q Consensus 181 ~LGGLLSAY~LSgd~~lL~KA~eLadrLl---pAFdT---ptG-i--P~~~iNl~~g~~~~~~~~~~~s~lAe~GSl~LE 251 (569)
.+.||+-||..+||+.+++.|++-.|.|. |.|+. .+| + |+.. + . ..-.+-+.|.+.+-
T Consensus 87 ~l~gl~~ay~~Tgd~kY~~ya~~~~dfi~~~~p~~~~~~~~~G~l~~~~r~-----~-~-------~~~~LDD~g~~~~~ 153 (445)
T 3k11_A 87 TYSALIAAAETTGDKRYTDYVQNRFRFLAEVAPHFKRVYEEKGKTDSQLLQ-----I-L-------TPHALDDAGAVCTA 153 (445)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHH-----H-H-------SCCSGGGTHHHHHH
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccchhhhhhhccCCeeccccc-----c-c-------CCCcchhHHHHHHH
Confidence 58899999999999999999999888765 43320 111 1 1111 1 0 01246778999999
Q ss_pred HHHHHHHhCCchHHHHHHHHHHHHhhcC--CCCCCcceeecCCCCCCCCCeeeecccCchHH---HHHHHHHHhcCCCCC
Q 008341 252 LIALSQRTGDPKYRQKAEKVIVELNKTF--PADGLLPIYISPDRGTPSYSTITFGAMGDSFY---EYLLKVWIQGNKTSA 326 (569)
Q Consensus 252 F~~LS~lTGd~kY~~~a~~i~~~L~~~~--~~~GL~p~~id~~tg~~~~~~~t~Ga~~DSyY---EYLLK~~iL~g~~~~ 326 (569)
+..+.+.|+|++|.++|....+.|.... ...|-+-.. ++..+ .+= .|..| ..|.+...++|+.+
T Consensus 154 Li~lY~~T~d~~yl~~a~~~ad~L~~~~pRt~~Ggf~h~-~~~~~-----q~W----iD~lyM~~pfla~~~~~tgd~~- 222 (445)
T 3k11_A 154 MIKLRLKDESLPVDGLIQNYFDFIINKEYRLADGTFARN-RPQRN-----TLW----LDDMFMGIPAVAQMSRYDKEAK- 222 (445)
T ss_dssp HHHHHHHCTTCCCHHHHHHHHHHHHHTSCBCTTCCBCBC-SSSTT-----EEE----THHHHHHHHHHHHHHHHCGGGH-
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHcCCCCCCCceeec-CCCCC-----ceE----ecchhhHHHHHHHHHHHHCCcc-
Confidence 9999999999999999999999998854 334544331 21111 111 35555 56788888898653
Q ss_pred cchHHHHHHHHHHHHH---HhccccCCCCCeeeeccCCCcccccccccccccc---hhhhhhcC----CCC--CCCchHH
Q 008341 327 VKPYRDMWETSMKGLL---SLVRRSTPSSFTYICEKNGDSLIDKMDELACFAP---GMIALGSS----GYG--PGDSEKF 394 (569)
Q Consensus 327 ~~~~~~my~~a~~~i~---~ll~~~~~~~~~~v~~~~g~~~~~~m~hLsCF~p---GmlaLGa~----~~~--~~~~~~~ 394 (569)
. ..+++|+..+. +++.. +..++.| ....... . .+-.+||+ |-.++|-. ..+ ....+++
T Consensus 223 -~---~y~d~A~~q~~~~~~~l~D-~~tGL~~-Hg~~~~~---~-~~~~~~WaRGnGW~~~gl~~~l~~lp~~~~~r~~l 292 (445)
T 3k11_A 223 -N---KYLAEAVKQFLQFADRMFI-PEKGLYR-HGWVESS---T-DHPAFCWARANGWALLTACELLDVLPEDYPQRPKV 292 (445)
T ss_dssp -H---HHHHHHHHHHHHHHHHHEE-TTTTEEC-SEEETTC---S-SCCCCCBHHHHHHHHHHHHHHHHHSCTTCTTHHHH
T ss_pred -h---HHHHHHHHHHHHHHHhccc-CCCCCEe-eeecCCC---C-CCCcceecccchHHHHHHHHHHHhcccccccHHHH
Confidence 1 13344444332 23332 2234432 2111100 0 11234552 11112111 111 2245778
Q ss_pred HHHHHHHHHHHHHhhccCCCCccceeEeecCCCccccccCCCCCchhHHHHHHHHHhh-----cC--c-chHHHHHHHHH
Q 008341 395 LSLAEELAWTCYNFYQSTPTKLAGENYFFRDGQDMSVGTSWNILRPETVESLFYLWRL-----TG--N-KTYKEWGWNIF 466 (569)
Q Consensus 395 l~lA~~L~~tC~~~y~~t~tGl~PE~~~f~~~~~~~~~~~~y~LRPE~IESlfyLyR~-----TG--D-~~yre~gW~if 466 (569)
++..+++++.+.+.- .++| .++..-+ .. ..| +|+==|.++.|-+ -| | .+|+++|.+++
T Consensus 293 ~~~~~~~a~~l~~~Q--~~~G----~W~~vld----~~-~~y---~EsSaTAmfaygllkgvr~G~Ld~~~Y~~~A~ka~ 358 (445)
T 3k11_A 293 MDYFRAHVRGVTALQ--SGEG----FWHQLLD----CN-DSY---LETSATAIYVYCLAHAINKGWIDAIAYGPVAQLGW 358 (445)
T ss_dssp HHHHHHHHHHHHTTC--CTTS----CEESBTT----CT-TSC---EEHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC--CCCC----chhhccC----CC-CCC---CCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 899999998887643 2455 2221111 11 122 5665555554332 11 3 46999999999
Q ss_pred HHHHHHcccCcCccccccC
Q 008341 467 QAFEKNSRIESGYVGLKDV 485 (569)
Q Consensus 467 ~ai~k~~r~~~Gya~l~dV 485 (569)
+++..+. .+.|. |.+|
T Consensus 359 ~~L~~~i-~~dG~--l~~v 374 (445)
T 3k11_A 359 HAVAGKI-NEEGQ--VEGT 374 (445)
T ss_dssp HHHHTTB-CTTSC--BCSC
T ss_pred HHHHHhC-CCCCC--Eece
Confidence 9998743 35574 4444
No 32
>1kwf_A Endoglucanase A; hydrolase, inverting glycosidase, atomic resolution, protein-carbohydrate interactions, reaction mechanism, cellulase; HET: BGC; 0.94A {Clostridium thermocellum} SCOP: a.102.1.2 PDB: 1is9_A 1cem_A
Probab=84.49 E-value=3.8 Score=42.82 Aligned_cols=136 Identities=18% Similarity=0.262 Sum_probs=89.1
Q ss_pred HHhcCCCCCChhHHHHHHHHHHhhcCCC--------CCcc--------ccccchhhhhccccceeeccCCCh---hHHHH
Q 008341 140 YSMCLFWRISDYSFSSEFMWIANSLDFN--------KSYD--------ASVFETTIRVVGGLLSAYDLSGDK---VFLEK 200 (569)
Q Consensus 140 ~IMgl~~~~~~eEF~~A~~~V~~~ldF~--------~~~~--------vsvFEttIR~LGGLLSAY~LSgd~---~lL~K 200 (569)
..|+- +++|++-.+|..+++.=+ .++. .|--+-=+++.=+||=|..+=+++ .++..
T Consensus 73 v~~~d-----~~~Fd~l~~wt~~~~~~~~l~aW~~~~~g~~~~~~d~~~~AtDgDl~IA~ALl~A~~~W~~~g~~~Y~~~ 147 (363)
T 1kwf_A 73 VCFNE-----QALFDDLYRYVKSHFNGNGLMHWHIDANNNVTSHDGGDGAATDADEDIALALIFADKLWGSSGAINYGQE 147 (363)
T ss_dssp HHTTC-----HHHHHHHHHHHHTTBCTTSSBCSEECTTSCBCTTTTTTSCBHHHHHHHHHHHHHHHHHHCSSSSSCHHHH
T ss_pred HHcCC-----HHHHHHHHHHHHHhcCCCCCeEEEECCCCCcccCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcchhHHHH
Confidence 45788 999999999998765311 1121 123334467777888888777776 79999
Q ss_pred HHHHHHHHhhcccCCCCCCcceeecCCCCCCCCCCCC-CCccccccccchhh-HHHHHHHhCCchHHHHHHHHHHHHhhc
Q 008341 201 ARDIADRLLPAWNTRTGIPYNVINLAHGNPHNPSWTG-GESILADSGTEQLE-LIALSQRTGDPKYRQKAEKVIVELNKT 278 (569)
Q Consensus 201 A~eLadrLlpAFdTptGiP~~~iNl~~g~~~~~~~~~-~~s~lAe~GSl~LE-F~~LS~lTGd~kY~~~a~~i~~~L~~~ 278 (569)
|+.|++.|+.-=-.| |.. .+.+ |. .|.. ..++++-. .+. |..+++.||++...+.+++..+.|.+.
T Consensus 148 A~~i~~~i~~~~~~~-~~~--~l~p--g~----~~~~~~~~npSY~---~p~~~~~fa~~~~~~~W~~~~~~~~~~l~~~ 215 (363)
T 1kwf_A 148 ARTLINNLYNHCVEH-GSY--VLKP--GD----RWGGSSVTNPSYF---APAWYKVYAQYTGDTRWNQVADKCYQIVEEV 215 (363)
T ss_dssp HHHHHHHHHHHHBCT-TTC--CBCS--BS----SSCBTTBBCGGGC---CHHHHHHHHHHHCCTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccC-CCe--EEec--cc----cCCCCCEecchhc---CHHHHHHHHHccCCchHHHHHHHHHHHHHHH
Confidence 999999988642223 321 1111 11 1211 12233222 233 478899999999999999998888874
Q ss_pred ---CCCCCCcceeecCC
Q 008341 279 ---FPADGLLPIYISPD 292 (569)
Q Consensus 279 ---~~~~GL~p~~id~~ 292 (569)
.+..||+|+.++.+
T Consensus 216 ~~~~~~tGL~PDw~~~~ 232 (363)
T 1kwf_A 216 KKYNNGTGLVPDWCTAS 232 (363)
T ss_dssp TTTSTTSCCCCSSBCTT
T ss_pred hhhcCCCCCCCcceeec
Confidence 45789999999764
No 33
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=78.04 E-value=5.8 Score=41.77 Aligned_cols=115 Identities=13% Similarity=0.055 Sum_probs=72.4
Q ss_pred cceeeccCCChhHHHHHHHHHHHHhhcccCCCC-CCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHHhCCch
Q 008341 185 LLSAYDLSGDKVFLEKARDIADRLLPAWNTRTG-IPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQRTGDPK 263 (569)
Q Consensus 185 LLSAY~LSgd~~lL~KA~eLadrLlpAFdTptG-iP~~~iNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lTGd~k 263 (569)
|+.++..++++.+++.+++..+.++.-+. ++| .|... ..+......|-.|.+-++ +=+..+.+.++|++
T Consensus 240 Ll~~~~~~~~~~~~~~i~~~l~~l~~~~~-~~g~wp~~~---~~~~~~~~~wChG~~Gi~------~~l~~~~~~~~~~~ 309 (411)
T 3e6u_A 240 LMQPSLQVSQGKLHSLVKPSVDYVCQLKF-PSGNYPPCI---GDNRDLLVHWCHGAPGVI------YMLIQAYKVFREEK 309 (411)
T ss_dssp HTCGGGCCCHHHHHHTHHHHHHHHHHTCC-TTSCCCSBT---TCCCCCCCSSSSSHHHHH------HHHHHHHHHHCCHH
T ss_pred HHHHHhhcChHHHHHHHHHHHHHHHHhhc-cCCCCCCCC---CcccCccccccCCcHHHH------HHHHHHHHHcCCHH
Confidence 66777788899999999999999987654 344 33211 111122334544433222 23667788999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCcceeecCCCCCCCCCeeeecccCchHHHHHHHHHHhcCCCC
Q 008341 264 YRQKAEKVIVELNKTFPADGLLPIYISPDRGTPSYSTITFGAMGDSFYEYLLKVWIQGNKTS 325 (569)
Q Consensus 264 Y~~~a~~i~~~L~~~~~~~GL~p~~id~~tg~~~~~~~t~Ga~~DSyYEYLLK~~iL~g~~~ 325 (569)
|.+.|.++.+.+++. |+. ..+..+..+.. .--+.|++.|..+|+.+
T Consensus 310 ~~~~a~~~~~~~~~~----g~~-----~~~~~lChG~a-------G~~~~ll~~~~~t~~~~ 355 (411)
T 3e6u_A 310 YLCDAYQCADVIWQY----GLL-----KKGYGLCHGSA-------GNAYAFLTLYNLTQDMK 355 (411)
T ss_dssp HHHHHHHHHHHHHHH----CSB-----TTCSCSTTSHH-------HHHHHHHHHHHHHCCHH
T ss_pred HHHHHHHHHHHHHhc----Ccc-----CCCCceecChH-------HHHHHHHHHHHHhCCHH
Confidence 999999999999884 221 01111222222 23467899999998644
No 34
>1v5d_A Chitosanase; chitosan degradation, hydrolase, glycosil hydrolase, family 8; HET: PIN; 1.50A {Bacillus SP} SCOP: a.102.1.2 PDB: 1v5c_A*
Probab=77.40 E-value=9.1 Score=40.22 Aligned_cols=132 Identities=17% Similarity=0.177 Sum_probs=84.8
Q ss_pred hhHHHHHHHHHHhhcCCCCC----------c-----cccccchhhhhccccceeeccCCCh---hHHHHHHHHHHHHhhc
Q 008341 150 DYSFSSEFMWIANSLDFNKS----------Y-----DASVFETTIRVVGGLLSAYDLSGDK---VFLEKARDIADRLLPA 211 (569)
Q Consensus 150 ~eEF~~A~~~V~~~ldF~~~----------~-----~vsvFEttIR~LGGLLSAY~LSgd~---~lL~KA~eLadrLlpA 211 (569)
+++|++..+|..+++.=..+ + ..|--+-=+++.=+||=|..+=+++ .++..|+.|.+.|+.-
T Consensus 94 ~~~FD~l~~wt~~~l~~~~~~L~aW~~~~~g~~~~d~n~AtDgDl~IA~ALl~A~~~Wg~~g~~~Y~~~A~~il~~i~~~ 173 (386)
T 1v5d_A 94 QKIYDGLFKTARTFKSSQNPNLMGWVVADSKKAQGHFDSATDGDLDIAYSLLLAHKQWGSNGTVNYLKEAQDMITKGIKA 173 (386)
T ss_dssp HHHHHHHHHHHHHTBCSSCTTSBCSEECSSGGGTTTSCCCHHHHHHHHHHHHHHHHHHCSSSSSCHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCeEEEECCCCCcCCCCCCCCHHHHHHHHHHHHHHHHcCCCchHhHHHHHHHHHHHHHHh
Confidence 89999999999886541111 1 1233444466677777777777776 8999999999988764
Q ss_pred c-cCCCCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHHhCCchHHHHHHHHHHHHhhc---C-CCCCCcc
Q 008341 212 W-NTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQRTGDPKYRQKAEKVIVELNKT---F-PADGLLP 286 (569)
Q Consensus 212 F-dTptGiP~~~iNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lTGd~kY~~~a~~i~~~L~~~---~-~~~GL~p 286 (569)
= ...+++ +.+.... .... ..++++-+ +.-=|..+.++||++.+.+++++..+.|.+. . +..||+|
T Consensus 174 ~~~~~~~~----l~~g~~~-~~~~---~~~npSY~--~p~~l~~f~~~~~~~~W~~v~~~~~~~l~~~~~~~~~~tGL~P 243 (386)
T 1v5d_A 174 SNVTNNNQ----LNLGDWD-SKSS---LDTRPSDW--MMSHLRAFYEFTGDKTWLTVINNLYDVYTQFSNKYSPNTGLIS 243 (386)
T ss_dssp HHBCTTSS----BCSSTTS-CTTC---CCBCGGGC--CHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHCTTTCCCC
T ss_pred cccCCCCe----eeecccC-CCCC---Ceechhhc--cHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhcCCCcCCCC
Confidence 2 222222 2221110 0011 12233321 1133888999999999988988888887663 2 5789999
Q ss_pred eeecC
Q 008341 287 IYISP 291 (569)
Q Consensus 287 ~~id~ 291 (569)
+++..
T Consensus 244 Dw~~~ 248 (386)
T 1v5d_A 244 DFVVK 248 (386)
T ss_dssp SSEET
T ss_pred cceec
Confidence 99988
No 35
>1wzz_A Probable endoglucanase; glycoside hydrolase family 8 (GH-8), (alpha/alpha)6 barrel, structural genomics; 1.65A {Gluconacetobacter xylinus} SCOP: a.102.1.2
Probab=75.64 E-value=4.7 Score=41.59 Aligned_cols=146 Identities=18% Similarity=0.101 Sum_probs=94.4
Q ss_pred HHHhcCCCCCChhHHHHHHHHHHhhcCCCCCc----------------cccccchhhhhccccceeeccCCChhHHHHHH
Q 008341 139 LYSMCLFWRISDYSFSSEFMWIANSLDFNKSY----------------DASVFETTIRVVGGLLSAYDLSGDKVFLEKAR 202 (569)
Q Consensus 139 L~IMgl~~~~~~eEF~~A~~~V~~~ldF~~~~----------------~vsvFEttIR~LGGLLSAY~LSgd~~lL~KA~ 202 (569)
..+|+- +++|++-.+|..+++....++ ..|--+-=+++.=+||=|..+=+++.++..|+
T Consensus 58 Av~~~d-----~~~FD~l~~wt~~~l~~~~~~L~aW~~~~~~~~~v~d~n~AtDgDl~IA~ALl~A~~~Wg~~~Y~~~A~ 132 (334)
T 1wzz_A 58 AASAGD-----LASFQSMWMWARTNLQHTNDKLFSWRFLKGHQPPVPDKNNATDGDLLIALALGRAGKRFQRPDYIQDAM 132 (334)
T ss_dssp HHHHTC-----HHHHHHHHHHHHHHTBCSSSSCBCSEEETTSSSSSCCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHhCC-----HHHHHHHHHHHHHHhccCCCCceEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 345888 999999999999876433221 12334444677778888888888999999999
Q ss_pred HHHHHHhhc-ccCCCCCCcceeecCCCCCCCCCCCC-CCccccccccchhhHHHHHHHhCCchHHHHHHHHHHHHhhc-C
Q 008341 203 DIADRLLPA-WNTRTGIPYNVINLAHGNPHNPSWTG-GESILADSGTEQLELIALSQRTGDPKYRQKAEKVIVELNKT-F 279 (569)
Q Consensus 203 eLadrLlpA-FdTptGiP~~~iNl~~g~~~~~~~~~-~~s~lAe~GSl~LEF~~LS~lTGd~kY~~~a~~i~~~L~~~-~ 279 (569)
.|.+.|+.- ..+.+|.+. |..|... ..++. ..++++-. +.-=|..+++.++|....+++++..+.|.+. .
T Consensus 133 ~il~~i~~~~v~~~~g~~~----llPg~~g-f~~~~~~~~npSY~--~p~~~~~fa~~~~~~~W~~~~~~~~~ll~~~~~ 205 (334)
T 1wzz_A 133 AIYGDVLNLMTMKAGPYVV----LMPGAVG-FTKKDSVILNLSYY--VMPSLLQAFDLTADPRWRQVMEDGIRLVSAGRF 205 (334)
T ss_dssp HHHHHHHHHHEEEETTEEE----ECSCSSS-CBCSSEEEECGGGC--CHHHHHHHHHHHCCTHHHHHHHHHHHHHHHSCB
T ss_pred HHHHHHHHhcccCCCCeEE----ECCCccc-ccCCCCCeechhhc--CHHHHHHHHHccCCchHHHHHHHHHHHHHHccc
Confidence 999998763 222234321 2111100 00000 01122221 1123777899999999999999999999873 4
Q ss_pred CCCCCcceeecC-C-CCCC
Q 008341 280 PADGLLPIYISP-D-RGTP 296 (569)
Q Consensus 280 ~~~GL~p~~id~-~-tg~~ 296 (569)
+..||.|+++.. + +|.+
T Consensus 206 ~~tGL~pDw~~~~~~~g~~ 224 (334)
T 1wzz_A 206 GQWRLPPDWLAVNRATGAL 224 (334)
T ss_dssp TTTTBCCSSEEEETTTCCE
T ss_pred CCCCCCccceeeecCCCCc
Confidence 578999999987 4 4554
No 36
>1wu4_A Xylanase Y; (alpla/alpha)6 barrel, glycoside hydrolase family 8, hydrola; 1.35A {Bacillus halodurans} SCOP: a.102.1.2 PDB: 1wu5_A* 3a3v_A 2drr_A 2drs_A 1wu6_A* 2drq_A 2dro_A
Probab=74.36 E-value=14 Score=39.03 Aligned_cols=146 Identities=19% Similarity=0.140 Sum_probs=92.3
Q ss_pred HHHhcCCCCCChhHHHHHHHHHHhhcCCCC-------------Cc----cccccchhhhhccccceeeccCC-----Chh
Q 008341 139 LYSMCLFWRISDYSFSSEFMWIANSLDFNK-------------SY----DASVFETTIRVVGGLLSAYDLSG-----DKV 196 (569)
Q Consensus 139 L~IMgl~~~~~~eEF~~A~~~V~~~ldF~~-------------~~----~vsvFEttIR~LGGLLSAY~LSg-----d~~ 196 (569)
..+|+- ++.|++..+|..+++.... ++ ..|--+-=+++.=+||=|..+=+ +..
T Consensus 79 Av~~~d-----~~~FD~l~~wt~~~l~~~~~~~~~L~aW~~~~~~~~~~~n~AtDgDl~IA~ALl~A~~~Wg~~~g~~~~ 153 (396)
T 1wu4_A 79 AVQMDR-----KDIFDRIWNWTMKNMYMTEGVHAGYFAWSCQPDGTKNSWGPAPDGEEYFALALFFASHRWGDGDEQPFN 153 (396)
T ss_dssp HHHTTC-----HHHHHHHHHHHHHHTBCCSSTTTTSBCSEECTTSCBSCSCCCHHHHHHHHHHHHHHHHHHCCCSSTTCC
T ss_pred HHHcCC-----HHHHHHHHHHHHHHhccCCcccCCCceEEECCCCCcCCCCCCCHHHHHHHHHHHHHHHHhCCCCCCcHH
Confidence 345788 9999999999988652221 11 23445555777778888887777 578
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCcceeecCCC-CCCCCCCCCCCccccccccchhhHHHH-HH---HhCCchHHHHHHHH
Q 008341 197 FLEKARDIADRLLPAWNTRTGIPYNVINLAHG-NPHNPSWTGGESILADSGTEQLELIAL-SQ---RTGDPKYRQKAEKV 271 (569)
Q Consensus 197 lL~KA~eLadrLlpAFdTptGiP~~~iNl~~g-~~~~~~~~~~~s~lAe~GSl~LEF~~L-S~---lTGd~kY~~~a~~i 271 (569)
++..|+.|++.|+.-=-...|-|. +++... ....+. +..++++-. ..-|.++ ++ .++++.+.+++++.
T Consensus 154 Y~~~A~~il~~i~~~~~~~~~~~~--l~p~~~~~~f~~~--~~~~npSY~---~pa~~~~fa~~~~~~~~~~W~~~~~~~ 226 (396)
T 1wu4_A 154 YSEQARKLLHTCVHNGEGGPGHPM--WNRDNKLIKFIPE--VEFSDPSYH---LPHFYELFSLWANEEDRVFWKEAAEAS 226 (396)
T ss_dssp HHHHHHHHHHHHHHTTSSSSCCCS--BCTTTCCBCSSTT--CSEECGGGC---CHHHHHHHHHHSCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccCCCcce--ecCCCceeeecCC--CCeeChhhc---cHHHHHHHHHhcccccChhHHHHHHHH
Confidence 999999999999863211112222 222221 001111 112333332 2345555 55 67888899999999
Q ss_pred HHHHhhc-CCCCCCcceeecCCCCCCC
Q 008341 272 IVELNKT-FPADGLLPIYISPDRGTPS 297 (569)
Q Consensus 272 ~~~L~~~-~~~~GL~p~~id~~tg~~~ 297 (569)
.+.|.+. .+..||+|+++..+ |++.
T Consensus 227 ~~lL~~~~~~~tGL~PDw~~~d-g~~~ 252 (396)
T 1wu4_A 227 REYLKIACHPETGLAPEYAYYD-GTPN 252 (396)
T ss_dssp HHHHHHHSCTTTCCCCSSEETT-SSBC
T ss_pred HHHHHhcccCCCCCCCceeeec-Cccc
Confidence 9998884 56789999999875 5543
No 37
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=62.48 E-value=4.2 Score=43.88 Aligned_cols=99 Identities=23% Similarity=0.279 Sum_probs=71.6
Q ss_pred ccccchhhhhccccceeeccCCChhHHHHHHHHHHHH-hhcccCCCCCCcceeecCCCCCCCCCCCCCCccccccccchh
Q 008341 172 ASVFETTIRVVGGLLSAYDLSGDKVFLEKARDIADRL-LPAWNTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQL 250 (569)
Q Consensus 172 vsvFEttIR~LGGLLSAY~LSgd~~lL~KA~eLadrL-lpAFdTptGiP~~~iNl~~g~~~~~~~~~~~s~lAe~GSl~L 250 (569)
+.-|..---+|=.++-||.+|+|+.|.+.|..++.++ +-.++++.|= -..||..+-. |+ --+.+
T Consensus 369 l~~~p~~~~yll~~vra~~~s~D~~Lw~~~~~ma~~~~lgdi~~~~~~-~~~~~~~~~~-------------~s-p~lL~ 433 (543)
T 2v8i_A 369 LKPYKAGNEFLISYARAYAIDNDPLLWKVARGIANDQGLGDIGTAPGK-EVKVNMDTTN-------------SD-PYALF 433 (543)
T ss_dssp ECCEECCHHHHHHHHHHHHHSCCHHHHHHHHHHHHHTTCEECTTBTTB-SCEECTTCCC-------------CC-HHHHH
T ss_pred eccccCCchhhHHHHHHHHcCCCHHHHHHHHHHHhhCCccccCCCcCc-ccccccCCCC-------------cC-HHHHH
Confidence 4556666667778899999999999999999999987 4455554332 1224443211 11 11345
Q ss_pred hHHHHHHHhCCchHHHHHHHHHHHHhhcCCCCCCc
Q 008341 251 ELIALSQRTGDPKYRQKAEKVIVELNKTFPADGLL 285 (569)
Q Consensus 251 EF~~LS~lTGd~kY~~~a~~i~~~L~~~~~~~GL~ 285 (569)
-...|.+.|++++|...|+++-+.|.++.-.+|||
T Consensus 434 allEL~~atq~~~~l~lA~~~g~nl~~~~~~~G~F 468 (543)
T 2v8i_A 434 ALLDLYHASQVADYRKLAEKIGDNIIKIRYIDGFF 468 (543)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHHHHEETTEE
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcCcee
Confidence 67889999999999999999999999866667775
No 38
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=61.38 E-value=1.6e+02 Score=30.65 Aligned_cols=276 Identities=16% Similarity=0.138 Sum_probs=132.4
Q ss_pred HHHHHHHhhcCCCCCccccccchhhhhccccceeeccCCChhHHHHHHHHHHHHhhcccCCCCCCcceeecCCCCCCCCC
Q 008341 155 SEFMWIANSLDFNKSYDASVFETTIRVVGGLLSAYDLSGDKVFLEKARDIADRLLPAWNTRTGIPYNVINLAHGNPHNPS 234 (569)
Q Consensus 155 ~A~~~V~~~ldF~~~~~vsvFEttIR~LGGLLSAY~LSgd~~lL~KA~eLadrLlpAFdTptGiP~~~iNl~~g~~~~~~ 234 (569)
+-++.|.+.+.=..+.+.++|.-..=+.=-|+-.|.+++|+.+++.|.++.+.+....+.. ...
T Consensus 54 ~ll~~~~~~~~~~~~~~~~lY~G~~Gia~~l~~l~~~t~d~~yl~~a~~~l~~~~~~l~~~----------------~~~ 117 (411)
T 3e6u_A 54 ELLQQMERGLKSADPRDGTGYTGWAGIAVLYLHLYDVFGDPAYLQLAHGYVKQSLNCLTKR----------------SIT 117 (411)
T ss_dssp HHHHHHHHHTTTSCTTCCCSSSSHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCCSC----------------CCC
T ss_pred HHHHHHHhhcccCCCCCCCeeeChHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccc----------------CCc
Confidence 3334444333222234567777555444457777889999999999999999987654310 111
Q ss_pred CCCCCccccccccchhhHHHHHHHhCCchHHHHHHHHHHHHhhcCCCCCCcceeecCCCCCCCCCeeeecccCchHHHHH
Q 008341 235 WTGGESILADSGTEQLELIALSQRTGDPKYRQKAEKVIVELNKTFPADGLLPIYISPDRGTPSYSTITFGAMGDSFYEYL 314 (569)
Q Consensus 235 ~~~~~s~lAe~GSl~LEF~~LS~lTGd~kY~~~a~~i~~~L~~~~~~~GL~p~~id~~tg~~~~~~~t~Ga~~DSyYEYL 314 (569)
+ ....+| ...=...|.+.+||++ .+.+..+.+.+.... +.+. ...+-.|.. .+-=.|
T Consensus 118 ~-----~~G~aG-~l~~l~~ly~~~g~~~---~a~~~~~~l~~~~~~--------~~~~----~~dll~G~A--G~l~aL 174 (411)
T 3e6u_A 118 F-----LCGDAG-PLAVAAVLYHKMNNEK---QAEDCITRLIHLNKI--------DPHA----PNEMLYGRI--GYIYAL 174 (411)
T ss_dssp T-----TTSTHH-HHHHHHHHHHHTTCHH---HHHHHHHHHHGGGGG--------CTTC----CSSTTTSHH--HHHHHH
T ss_pred c-----ccCcHH-HHHHHHHHHHHhCCHH---HHHHHHHHHHHHhcc--------cccC----ChhhhcCcH--HHHHHH
Confidence 1 112222 2223566788999986 344445544442110 0000 001111222 233346
Q ss_pred HHHHHhcCCCCCcchH-HHHHHHHHHHHHHhcccc---CCCCCeeeeccCCCccccccccccccc---chhhhhhcCCCC
Q 008341 315 LKVWIQGNKTSAVKPY-RDMWETSMKGLLSLVRRS---TPSSFTYICEKNGDSLIDKMDELACFA---PGMIALGSSGYG 387 (569)
Q Consensus 315 LK~~iL~g~~~~~~~~-~~my~~a~~~i~~ll~~~---~~~~~~~v~~~~g~~~~~~m~hLsCF~---pGmlaLGa~~~~ 387 (569)
+..+-.+++..+.+.. .+.-+..++..+++.... .+..+.| .+.+ .. ...|. +|.+.+=.+...
T Consensus 175 l~L~~~~~~~~~~~~~i~~i~~~ii~~g~~~~~~~~~~~~~pl~~--~w~~-~~------~~G~aHG~aGI~~~Ll~~~~ 245 (411)
T 3e6u_A 175 LFVNKNFGVEKIPQSHIQQICETILTSGENLARKRNFTAKSPLMY--EWYQ-EY------YVGAAHGLAGIYYYLMQPSL 245 (411)
T ss_dssp HHHHHHHSSCCSCHHHHHHHHHHHHHHHHHHHHHTTTTTTCSCCC--CBTT-BC------BCSTTTSHHHHHHHHTCGGG
T ss_pred HHHHHHcCCccchHHHHHHHHHHHHHHHHHHHHhccccCCCCcce--eecC-cc------CCcccccHHHHHHHHHHHHh
Confidence 6677667776644321 222233333322221110 0111111 0000 00 01111 232211111111
Q ss_pred CCCchHHHHHHHHHHHHHHHhhccCCCCccceeEeecCCCccccccCCCCCchhHHHHHHHHHhhcCcchHHHHHHHHHH
Q 008341 388 PGDSEKFLSLAEELAWTCYNFYQSTPTKLAGENYFFRDGQDMSVGTSWNILRPETVESLFYLWRLTGNKTYKEWGWNIFQ 467 (569)
Q Consensus 388 ~~~~~~~l~lA~~L~~tC~~~y~~t~tGl~PE~~~f~~~~~~~~~~~~y~LRPE~IESlfyLyR~TGD~~yre~gW~if~ 467 (569)
.-+.+++.+.+++..+....... +.|--|.... .+. .....|=---|=++-++..++++++|++|++.+-+..+
T Consensus 246 ~~~~~~~~~~i~~~l~~l~~~~~--~~g~wp~~~~--~~~--~~~~~wChG~~Gi~~~l~~~~~~~~~~~~~~~a~~~~~ 319 (411)
T 3e6u_A 246 QVSQGKLHSLVKPSVDYVCQLKF--PSGNYPPCIG--DNR--DLLVHWCHGAPGVIYMLIQAYKVFREEKYLCDAYQCAD 319 (411)
T ss_dssp CCCHHHHHHTHHHHHHHHHHTCC--TTSCCCSBTT--CCC--CCCCSSSSSHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred hcChHHHHHHHHHHHHHHHHhhc--cCCCCCCCCC--ccc--CccccccCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 11245566666555544433322 3343332210 000 11223445578899999999999999999999999888
Q ss_pred HHHHHcc--cC----cCcccccc
Q 008341 468 AFEKNSR--IE----SGYVGLKD 484 (569)
Q Consensus 468 ai~k~~r--~~----~Gya~l~d 484 (569)
.+-+..- .. +|.+|+-.
T Consensus 320 ~~~~~g~~~~~~~lChG~aG~~~ 342 (411)
T 3e6u_A 320 VIWQYGLLKKGYGLCHGSAGNAY 342 (411)
T ss_dssp HHHHHCSBTTCSCSTTSHHHHHH
T ss_pred HHHhcCccCCCCceecChHHHHH
Confidence 8766531 11 26666633
No 39
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=53.81 E-value=19 Score=37.23 Aligned_cols=110 Identities=12% Similarity=0.006 Sum_probs=66.9
Q ss_pred ChhHHHHHHHHHHHHhh-cccCCCCCCcce--eec--------CCCCCCCCCCCCCCccccccccchhhHHHHHHHhCCc
Q 008341 194 DKVFLEKARDIADRLLP-AWNTRTGIPYNV--INL--------AHGNPHNPSWTGGESILADSGTEQLELIALSQRTGDP 262 (569)
Q Consensus 194 d~~lL~KA~eLadrLlp-AFdTptGiP~~~--iNl--------~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lTGd~ 262 (569)
++.+++.|+++.+.++. .|+.++|.-++. +.. .......+.|-+|.+-+ .+=+..+.+.|+|+
T Consensus 225 ~~~~~~~~~~~~~~l~~~~~~~~~g~~wp~g~~~~~~~~~~~~~~~~~~~~~WChG~~Gi------~~~l~~~~~~~~d~ 298 (409)
T 2g0d_A 225 NEASLSALQKIIFIYEKFELERKKQFLWKDGLVADELKKEKVIREASFIRDAWCYGGPGI------SLLYLYGGLALDND 298 (409)
T ss_dssp CHHHHHHHHHHHHHHHHHCCCGGGTTCCCSEECHHHHHHTSCCSCCSCCCCCSSSSHHHH------HHHHHHHHHHTTCH
T ss_pred ChhHHHHHHHHHHHHHHHHhcCCCCCcCCCccccHhhhcccccccCCCCCCcCCCCCHHH------HHHHHHHHHHcCCH
Confidence 89999999999999964 354455632222 221 11122345565444322 24467788899999
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCcceeecCCCCCCCCCeeeecccCchHHHHHHHHHHhcCCCC
Q 008341 263 KYRQKAEKVIVELNKTFPADGLLPIYISPDRGTPSYSTITFGAMGDSFYEYLLKVWIQGNKTS 325 (569)
Q Consensus 263 kY~~~a~~i~~~L~~~~~~~GL~p~~id~~tg~~~~~~~t~Ga~~DSyYEYLLK~~iL~g~~~ 325 (569)
+|.+.|+++.+.+++. +.. .....+..+.. .-.+.|+..+-.+++.+
T Consensus 299 ~~~~~a~~~~~~~~~~----~~~-----~~~~~LCHG~a-------G~~~~l~~l~~~~~~~~ 345 (409)
T 2g0d_A 299 YFVDKAEKILESAMQR----KLG-----IDSYMICHGYS-------GLIEICSLFKRLLNTKK 345 (409)
T ss_dssp HHHHHHHHHHHHHHHH----CTT-----CCSCCTTTSHH-------HHHHHHHHHHHHHCCCT
T ss_pred HHHHHHHHHHHHHHHh----ccC-----CCCCCCCChHH-------HHHHHHHHHHHHhCCHH
Confidence 9999999999999985 111 01111222222 23467888888888766
No 40
>3qxf_A Endoglucanase; cellulase, GH8, cellulose synthesis, cellulose degradation,; 1.85A {Escherichia coli k-12} PDB: 3qxq_A*
Probab=44.75 E-value=58 Score=33.91 Aligned_cols=138 Identities=14% Similarity=0.133 Sum_probs=84.2
Q ss_pred HHhcCCCCCChhHHHHHHHHHHhhcCCC--------------CCcc--c----cccchhhhhccccceeeccCCChhHHH
Q 008341 140 YSMCLFWRISDYSFSSEFMWIANSLDFN--------------KSYD--A----SVFETTIRVVGGLLSAYDLSGDKVFLE 199 (569)
Q Consensus 140 ~IMgl~~~~~~eEF~~A~~~V~~~ldF~--------------~~~~--v----svFEttIR~LGGLLSAY~LSgd~~lL~ 199 (569)
.+|+- +++|++..+|..+++.=. .++. | |--+-=+++-=+||=|..+=+++.++.
T Consensus 44 v~~~d-----r~~FD~Lw~wt~~~l~~~d~~~~L~aW~w~~~~~g~~~v~D~nsAtDGDl~IA~ALl~A~~~Wg~~~Y~~ 118 (355)
T 3qxf_A 44 LAAND-----RAAFDNILDWTQNNLAQGSLKERLPAWLWGKKENSKWEVLDSNSASDGDVWMAWSLLEAGRLWKEQRYTD 118 (355)
T ss_dssp HHTTC-----HHHHHHHHHHHHHHHSTTCTTTSCCCSEEEECTTSCEEEEECSCCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHhCC-----HHHHHHHHHHHHHHhccCCcccCCceEEEcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 45788 999999999998766421 1121 1 223333666667888888888999999
Q ss_pred HHHHHHHHHhhcccCC-CCCCcceeecCCCCCCCCCCCCC---CccccccccchhhHHHHHHHhCCchHHHHHHHHHHHH
Q 008341 200 KARDIADRLLPAWNTR-TGIPYNVINLAHGNPHNPSWTGG---ESILADSGTEQLELIALSQRTGDPKYRQKAEKVIVEL 275 (569)
Q Consensus 200 KA~eLadrLlpAFdTp-tGiP~~~iNl~~g~~~~~~~~~~---~s~lAe~GSl~LEF~~LS~lTGd~kY~~~a~~i~~~L 275 (569)
.|+.|++.|+.-=-.+ +|. ...+.+ |. .+|... .++++- +.+-+.++-... ++...++++...+.|
T Consensus 119 ~A~~il~~I~~~~v~~~~g~-~~~Llp--G~---~gF~~~~~~~~nPSY---~~p~~~~~fa~~-~~~W~~l~~~~~~lL 188 (355)
T 3qxf_A 119 IGSALLKRIAREEVVTVPGL-GSMLLP--GK---VGFAEDNSWRFNPSY---LPPTLAQYFTRF-GAPWTTLRETNQRLL 188 (355)
T ss_dssp HHHHHHHHHHHHHEEEETTT-EEEECS--SS---SSSEETTEEEECTTS---SCHHHHHHHGGG-CTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccCCCC-ceeecC--cc---cCccCCCCCeechhh---ccHHHHHHHHHh-CChHHHHHHHHHHHH
Confidence 9999999997632111 130 001111 10 011100 122222 224344333333 888888888888888
Q ss_pred hhcCCCCCCcceeecCCC
Q 008341 276 NKTFPADGLLPIYISPDR 293 (569)
Q Consensus 276 ~~~~~~~GL~p~~id~~t 293 (569)
.+.. ..||.|++++.+.
T Consensus 189 ~~~~-~tGL~PDwv~~~~ 205 (355)
T 3qxf_A 189 LETA-PKGFSPDWVRYEK 205 (355)
T ss_dssp HHTC-TTSCCCSSEEEET
T ss_pred HHhh-hcCCCCceEEecC
Confidence 8854 7899999998763
No 41
>3ren_A Glycosyl hydrolase, family 8; (alpha/alpha)6-barrel fold, alpha-amylase; 2.00A {Clostridium perfringens}
Probab=43.60 E-value=19 Score=37.54 Aligned_cols=67 Identities=16% Similarity=0.140 Sum_probs=51.9
Q ss_pred HHHHHHHHHhhcCcchHHHHHHHHHHHHHHHcccCcCccccccCCCCCCCCCcchHHHHHHHHHHHHh
Q 008341 442 TVESLFYLWRLTGNKTYKEWGWNIFQAFEKNSRIESGYVGLKDVNTGDKDNMMQSFFLAETLKYLYLL 509 (569)
Q Consensus 442 ~IESlfyLyR~TGD~~yre~gW~if~ai~k~~r~~~Gya~l~dV~~~~~~D~meSFflaETLKYLYLL 509 (569)
++.+|....+.=+++.|++.|-+|.++|.++|-.+....+-.|.... ..-.-+|||.=.+||.|+-.
T Consensus 119 IA~ALl~A~~~W~~~~Y~~~A~~I~~~i~~~~~~~g~l~~~~d~~~~-~~~ln~SY~~~~a~~~f~~~ 185 (350)
T 3ren_A 119 IIKALLLANNRWNSFYYKFYAINIANSLLKHAEENETLVDYIDNYGK-GNTTTLCYLDLPTMKLLSQV 185 (350)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEETTEECSEECSSCB-CSEEEGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHccccCcccCCCCccCC-CCEeehHhcCHHHHHHHHHh
Confidence 68888888888899999999999999999999876322222344333 33445899999999999965
No 42
>1wzz_A Probable endoglucanase; glycoside hydrolase family 8 (GH-8), (alpha/alpha)6 barrel, structural genomics; 1.65A {Gluconacetobacter xylinus} SCOP: a.102.1.2
Probab=43.30 E-value=26 Score=36.03 Aligned_cols=94 Identities=9% Similarity=0.018 Sum_probs=62.2
Q ss_pred hhhhhcCCCCCCCchHHHHHHHHHHHHHHHhhccCCCC---ccceeEeecCCCccccccCCCCCchhHHHHHHHHHhhcC
Q 008341 378 MIALGSSGYGPGDSEKFLSLAEELAWTCYNFYQSTPTK---LAGENYFFRDGQDMSVGTSWNILRPETVESLFYLWRLTG 454 (569)
Q Consensus 378 mlaLGa~~~~~~~~~~~l~lA~~L~~tC~~~y~~t~tG---l~PE~~~f~~~~~~~~~~~~y~LRPE~IESlfyLyR~TG 454 (569)
-|.++++..+ ..+|.+.|+.|...|.+--.....| |.|....|..... ...++.|.+- +.+-.+.+.|+
T Consensus 114 ALl~A~~~Wg---~~~Y~~~A~~il~~i~~~~v~~~~g~~~llPg~~gf~~~~~-~~~npSY~~p----~~~~~fa~~~~ 185 (334)
T 1wzz_A 114 ALGRAGKRFQ---RPDYIQDAMAIYGDVLNLMTMKAGPYVVLMPGAVGFTKKDS-VILNLSYYVM----PSLLQAFDLTA 185 (334)
T ss_dssp HHHHHHHHHT---CHHHHHHHHHHHHHHHHHHEEEETTEEEECSCSSSCBCSSE-EEECGGGCCH----HHHHHHHHHHC
T ss_pred HHHHHHHHhC---CHHHHHHHHHHHHHHHHhcccCCCCeEEECCCcccccCCCC-CeechhhcCH----HHHHHHHHccC
Confidence 3555665443 3689999999999888755443333 3344444433221 3455666543 44555678899
Q ss_pred cchHHHHHHHHHHHHHHHcccCcCc
Q 008341 455 NKTYKEWGWNIFQAFEKNSRIESGY 479 (569)
Q Consensus 455 D~~yre~gW~if~ai~k~~r~~~Gy 479 (569)
|+.|++..-...+-+.+.|..+.|+
T Consensus 186 ~~~W~~~~~~~~~ll~~~~~~~tGL 210 (334)
T 1wzz_A 186 DPRWRQVMEDGIRLVSAGRFGQWRL 210 (334)
T ss_dssp CTHHHHHHHHHHHHHHHSCBTTTTB
T ss_pred CchHHHHHHHHHHHHHHcccCCCCC
Confidence 9999999999999998887766673
No 43
>3nnb_A Alginate lyase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 1.60A {Bacteroides ovatus} PDB: 3nfv_A*
Probab=43.24 E-value=11 Score=39.56 Aligned_cols=62 Identities=23% Similarity=0.175 Sum_probs=34.3
Q ss_pred cCCCCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHHhCCchHHHHHHHHHHHHhh
Q 008341 213 NTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQRTGDPKYRQKAEKVIVELNK 277 (569)
Q Consensus 213 dTptGiP~~~iNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lTGd~kY~~~a~~i~~~L~~ 277 (569)
++|.|+||-+ +.|+..+....+..+.+.....-.--..-.-.+|||.+|.++|.+++++-..
T Consensus 75 ~~~dg~Pyi~---rDG~~nP~~~~~d~~~l~~~~~a~~~LALAW~~TGd~~YA~kA~~iL~aWf~ 136 (382)
T 3nnb_A 75 SKPDGLPYIR---KDGQRNPELDKLDRNKLGDMSKAVTTLGLAYYFSGDEKYAQKAVDFLNVWFL 136 (382)
T ss_dssp TSTTCCSCEE---CTTCCCGGGGGSSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCccc---ccCCCCCccccccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHC
Confidence 6788999943 3444322211111111111111112233345789999999999999988765
No 44
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=41.73 E-value=77 Score=33.61 Aligned_cols=106 Identities=23% Similarity=0.234 Sum_probs=65.2
Q ss_pred CChhHH-HHHHHHHHHHhhcccCCCC-CCcceeecCCC-----CC-------------------CCCCCCCCCccccccc
Q 008341 193 GDKVFL-EKARDIADRLLPAWNTRTG-IPYNVINLAHG-----NP-------------------HNPSWTGGESILADSG 246 (569)
Q Consensus 193 gd~~lL-~KA~eLadrLlpAFdTptG-iP~~~iNl~~g-----~~-------------------~~~~~~~~~s~lAe~G 246 (569)
+|.-|. +.|+.+||.|+ +|++|+| =|+. ++...- .. ..+.+. ...+=+.+
T Consensus 74 ~~~~y~s~~A~~iAd~ll-~~Q~~~GGW~kn-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~T~Dnd 149 (408)
T 1r76_A 74 PAAWYTSKAARHVADVIV-SFQTPAGGWGKN-QPRDGALRLPGQHYTGENVAKVKSGSNDLDAARDRDWH--YVGTIDND 149 (408)
T ss_dssp CGGGGGSHHHHHHHHHHH-HHCCTTSCCCSS-CCSSSCCCCTTCCSSCCCCCCCC---------CCCCCS--SSSBCGGG
T ss_pred chhhhchHHHHHHHHHHH-HccccCCCCCCc-cccccccchhhhhcccccccccccccccchhhcccccC--CCCCCCCc
Confidence 356677 47999999999 5788875 4442 232111 00 000111 11122223
Q ss_pred cchhhHHHHHHH----h--CCchHHHHHHHHHHHHhhcCCCCCCcceeecCCCCCCCCCeeeec
Q 008341 247 TEQLELIALSQR----T--GDPKYRQKAEKVIVELNKTFPADGLLPIYISPDRGTPSYSTITFG 304 (569)
Q Consensus 247 Sl~LEF~~LS~l----T--Gd~kY~~~a~~i~~~L~~~~~~~GL~p~~id~~tg~~~~~~~t~G 304 (569)
.-..|...|.++ | ++++|.+++.|..+-|..+...+|=+|.+- ++++.+ .++|+|.
T Consensus 150 dTa~vl~aL~rv~~~~t~~~~~~y~~Ai~Rgl~wlL~mQ~~nGGWpqFd-pdn~~y-~~~IpFn 211 (408)
T 1r76_A 150 ATVTEIRFLAQVVSQLAPEEAAPYRDAALKGIEYLLASQFPNGGWPQVW-PLEGGY-HDAITYN 211 (408)
T ss_dssp TTHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHSCTTSCCBSBS-SCCCGG-GGSEECG
T ss_pred hHHHHHHHHHHHHhhccccccHHHHHHHHHHHHHHHHccCCCCCCcCcC-cccccc-ccCCCcC
Confidence 334455555553 6 899999999999999999888899998874 454433 3567774
No 45
>3eu8_A Putative glucoamylase; YP_210071.1, structural genomics, JOI for structural genomics, JCSG; 2.12A {Bacteroides fragilis nctc 9343}
Probab=41.66 E-value=59 Score=34.70 Aligned_cols=75 Identities=16% Similarity=0.175 Sum_probs=47.0
Q ss_pred CCCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHHhCC-------chHHHHHHHHHHHHhhcCCCCCCcce
Q 008341 215 RTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQRTGD-------PKYRQKAEKVIVELNKTFPADGLLPI 287 (569)
Q Consensus 215 ptGiP~~~iNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lTGd-------~kY~~~a~~i~~~L~~~~~~~GL~p~ 287 (569)
.||+|..++....-.+.+. ...++++.+| |.-+|-+.+- ..-.+.++++.+.|.+...-.|.+++
T Consensus 40 ~~gL~~Dn~~~~~~~p~~~---a~~tS~tniG-----fgL~A~~vA~e~G~I~r~ea~~R~~~tL~~l~~~~r~~G~fyh 111 (430)
T 3eu8_A 40 NSGLARERYHMDGEYPAGG---PEIVTSGGSG-----FGIMAILAGIDRGYVSREEGLRRMEKIVGFLEKADRFKGAYPH 111 (430)
T ss_dssp TTCCCBSEEETTCCCTTSC---TTEEEHHHHH-----HHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHSCCBTTBCCS
T ss_pred cCCCCCCCccccCCCCCCC---CCccCCHHHH-----HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhchhcCCcCcc
Confidence 3799998776542111111 1235666666 6666665532 23344555566666666777899999
Q ss_pred eecCCCCCCC
Q 008341 288 YISPDRGTPS 297 (569)
Q Consensus 288 ~id~~tg~~~ 297 (569)
++|..||+..
T Consensus 112 wyD~~Tg~~l 121 (430)
T 3eu8_A 112 WWNGETGHVQ 121 (430)
T ss_dssp EEETTTCCBC
T ss_pred ccCCCCCCcC
Confidence 9999999954
No 46
>3ren_A Glycosyl hydrolase, family 8; (alpha/alpha)6-barrel fold, alpha-amylase; 2.00A {Clostridium perfringens}
Probab=36.13 E-value=1e+02 Score=31.96 Aligned_cols=133 Identities=17% Similarity=0.077 Sum_probs=91.1
Q ss_pred hhHHHHHHHHHHhhcCCCCCc------------cccccchhhhhccccceeeccCCChhHHHHHHHHHHHHhhcccCCCC
Q 008341 150 DYSFSSEFMWIANSLDFNKSY------------DASVFETTIRVVGGLLSAYDLSGDKVFLEKARDIADRLLPAWNTRTG 217 (569)
Q Consensus 150 ~eEF~~A~~~V~~~ldF~~~~------------~vsvFEttIR~LGGLLSAY~LSgd~~lL~KA~eLadrLlpAFdTptG 217 (569)
++.|++..+|..+++. + ++ .+|--.-=+|+.-.|+=|...=+++.+...|++|+..|+. ....+|
T Consensus 78 ~~~Fd~l~~~t~~~l~-~-~~L~sWr~~~~~~~~nNAtdgDl~IA~ALl~A~~~W~~~~Y~~~A~~I~~~i~~-~~~~~g 154 (350)
T 3ren_A 78 KELFDEHFDIVKEMRL-K-NGLISWRKEGDENSPSSATIDELRIIKALLLANNRWNSFYYKFYAINIANSLLK-HAEENE 154 (350)
T ss_dssp HHHHHHHHHHHHTTBC-T-TSSBCSEEETTEECSCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-HHEETT
T ss_pred HHHHHHHHHHHHHHhc-c-CCceEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHH-HccccC
Confidence 9999999999988765 2 21 2344445588889999999999999999999999999987 232334
Q ss_pred CCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHHhCCchHHHHHHHHHHHHhhcCCC--CCCcceeecCCCCC
Q 008341 218 IPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQRTGDPKYRQKAEKVIVELNKTFPA--DGLLPIYISPDRGT 295 (569)
Q Consensus 218 iP~~~iNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lTGd~kY~~~a~~i~~~L~~~~~~--~GL~p~~id~~tg~ 295 (569)
......+..++ +...+++-+ +.-=|..|.+. ++...+.+++..+.|.+..+. .+|+|...++.+++
T Consensus 155 ~l~~~~d~~~~--------~~~ln~SY~--~~~a~~~f~~~--~~~W~~l~~~g~~lL~~g~p~D~~~l~~~~~~~~~~~ 222 (350)
T 3ren_A 155 TLVDYIDNYGK--------GNTTTLCYL--DLPTMKLLSQV--DKKWEGIYEKSNSIIENGKISEEVPLYRKVFYEETQK 222 (350)
T ss_dssp EECSEECSSCB--------CSEEEGGGC--CHHHHHHHHHH--CTHHHHHHHHHHHHHHTTBCCSSSCCBCSEEETTTTE
T ss_pred cccCCCCccCC--------CCEeehHhc--CHHHHHHHHHh--cchHHHHHHHHHHHHHhCCCCcccccCCcccccCCCC
Confidence 43333333221 111222221 12346777777 578899999999999985444 37899988887755
Q ss_pred CC
Q 008341 296 PS 297 (569)
Q Consensus 296 ~~ 297 (569)
+.
T Consensus 223 y~ 224 (350)
T 3ren_A 223 YD 224 (350)
T ss_dssp EC
T ss_pred cc
Confidence 43
No 47
>1h12_A Endo-1,4-beta-xylanase; hydrolase, xylan degradation, psychrophilic, cold adaptation, temperature, glycosyl hydrolase, family 8; HET: XYP XYS; 1.2A {Pseudoalteromonas haloplanktis} SCOP: a.102.1.2 PDB: 1h13_A 1xw2_A 1xwq_A* 1h14_A 1xwt_A 2b4f_A* 2a8z_A*
Probab=34.92 E-value=74 Score=33.54 Aligned_cols=137 Identities=15% Similarity=0.148 Sum_probs=86.3
Q ss_pred HHHhcCCCCCChhHHHHHHHHHHhhc----CC---------------CCCccc------cccchhhhhccccceeeccCC
Q 008341 139 LYSMCLFWRISDYSFSSEFMWIANSL----DF---------------NKSYDA------SVFETTIRVVGGLLSAYDLSG 193 (569)
Q Consensus 139 L~IMgl~~~~~~eEF~~A~~~V~~~l----dF---------------~~~~~v------svFEttIR~LGGLLSAY~LSg 193 (569)
-.+|+- ++.|++..+|+.+++ .- +.++.+ |--+-=+++-=+||=|..+=+
T Consensus 87 Av~~~d-----r~~FD~L~~wtk~~l~~~~~~~~g~~~~l~aW~~g~~~~g~~~d~n~~sAtDgDl~IA~ALl~A~~~Wg 161 (405)
T 1h12_A 87 AVMLNK-----QEEFDNLWRFAKAYQKNPDNHPDAKKQGVYAWKLKLNQNGFVYKVDEGPAPDGEEYFAFALLNASARWG 161 (405)
T ss_dssp HHHTTC-----HHHHHHHHHHHHHHTBCCTTCSSGGGTTCBEEEEEECTTSCEEEEEEEECHHHHHHHHHHHHHHHHHHC
T ss_pred HHHcCC-----HHHHHHHHHHHHHHhccccccccCCcccceEEEeccCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHcC
Confidence 345888 999999999998877 11 112221 122222666667777776666
Q ss_pred ---ChhHHHHHHHHHHHHhhcccCCCCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHH-HHHHhCC----chHH
Q 008341 194 ---DKVFLEKARDIADRLLPAWNTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIA-LSQRTGD----PKYR 265 (569)
Q Consensus 194 ---d~~lL~KA~eLadrLlpAFdTptGiP~~~iNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~-LS~lTGd----~kY~ 265 (569)
+..++..|+.|.+.|+.-= |.. ..+.+..+.. ..++++-. .+-|.+ +++.|++ +.+.
T Consensus 162 ~~g~~~Y~~~A~~il~~I~~~~--~~~---~~~~f~p~~~-------~~~npSY~---~pa~~~~fa~~~~~~~~~~~W~ 226 (405)
T 1h12_A 162 NSGEFNYYNDAITMLNTIKNKL--MEN---QIIRFSPYID-------NLTDPSYH---IPAFYDYFANNVTNQADKNYWR 226 (405)
T ss_dssp SSSSCCHHHHHHHHHHHHHHHS--EET---TEECSCTTCS-------SCBCGGGC---CHHHHHHHHHHCSSHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHHHhC--CCC---CeeEEecCCC-------CeeChhhc---CHHHHHHHHHhcccccCchhHH
Confidence 6789999999999998742 211 1233322211 11222322 234444 4889988 7788
Q ss_pred HHHHHHHHHHhhcC-CCCC----Ccceeec-CCCCCC
Q 008341 266 QKAEKVIVELNKTF-PADG----LLPIYIS-PDRGTP 296 (569)
Q Consensus 266 ~~a~~i~~~L~~~~-~~~G----L~p~~id-~~tg~~ 296 (569)
+++++..+.|.+.. +..| |+|+++. .+ |++
T Consensus 227 ~v~~~~~~lL~~~~~~~tG~~~~L~PDw~~~~d-g~p 262 (405)
T 1h12_A 227 QVATKSRTLLKNHFTKVSGSPHWNLPTFLSRLD-GSP 262 (405)
T ss_dssp HHHHHHHHHHHHHHHHHSSTTTTTCCCSCBCTT-SCB
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCchhHHhcC-CCc
Confidence 88888888887743 3478 9999998 65 554
No 48
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=34.87 E-value=23 Score=36.49 Aligned_cols=65 Identities=14% Similarity=0.055 Sum_probs=44.8
Q ss_pred cceeeccCCChhHHHHHHHHHHHHhhcccCCCCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHHhCCchH
Q 008341 185 LLSAYDLSGDKVFLEKARDIADRLLPAWNTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQRTGDPKY 264 (569)
Q Consensus 185 LLSAY~LSgd~~lL~KA~eLadrLlpAFdTptGiP~~~iNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lTGd~kY 264 (569)
|+.+|...+|+.+++.|++.++.++.. .+. ..++. -|=.-+|...+ |..+.+.|+|++|
T Consensus 288 l~~~~~~~~d~~~~~~a~~~~~~~~~~----~~~-----------~~~~~-----LCHG~aG~~~~-l~~l~~~~~~~~~ 346 (409)
T 2g0d_A 288 YLYGGLALDNDYFVDKAEKILESAMQR----KLG-----------IDSYM-----ICHGYSGLIEI-CSLFKRLLNTKKF 346 (409)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHH----CTT-----------CCSCC-----TTTSHHHHHHH-HHHHHHHHCCCTT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHh----ccC-----------CCCCC-----CCChHHHHHHH-HHHHHHHhCCHHH
Confidence 577888899999999999999988863 000 01122 12222333322 7889999999999
Q ss_pred HHHHHH
Q 008341 265 RQKAEK 270 (569)
Q Consensus 265 ~~~a~~ 270 (569)
.+.|.+
T Consensus 347 ~~~a~~ 352 (409)
T 2g0d_A 347 DSYMEE 352 (409)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998887
No 49
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=33.15 E-value=41 Score=37.35 Aligned_cols=86 Identities=14% Similarity=0.189 Sum_probs=52.8
Q ss_pred ccccceeeccCCChhHHHHHHHHHHHHhhccc-CCCCCCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHHHhC
Q 008341 182 VGGLLSAYDLSGDKVFLEKARDIADRLLPAWN-TRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQRTG 260 (569)
Q Consensus 182 LGGLLSAY~LSgd~~lL~KA~eLadrLlpAFd-TptGiP~~~iNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~lTG 260 (569)
+=|.+--|.-|+|+.+|++|+++++.|..-|. .+.+-++ +-+-..+ ++ +-+ . -|..|--.+-+.+|.++|+
T Consensus 309 ~WAA~eLy~ATgd~~YL~~a~~~a~~l~~~~~~~~~~g~~-w~~~d~~-~r-~~~---d--~a~~gl~~iaLl~l~~~~~ 380 (586)
T 3h7l_A 309 LLASVELFKATKETRYLEESRLWAQRLVARQMSDEQIQHF-WSANQDG-SR-PYF---H--AAEAGLPTIALCEYLAIED 380 (586)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHTTEECCSSCSSE-EBSSSSS-SS-BCC---C--TTTTTHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccCCccCCCc-CCCcccC-Cc-ccc---c--ccccHHHHHHHHHhhhhcC
Confidence 44555667889999999999999999998774 3333222 2111111 11 111 1 1233333556778899999
Q ss_pred CchHHHHHHHHHHHH
Q 008341 261 DPKYRQKAEKVIVEL 275 (569)
Q Consensus 261 d~kY~~~a~~i~~~L 275 (569)
|+.+.+.|++.++.-
T Consensus 381 d~~~~~~a~~~i~~~ 395 (586)
T 3h7l_A 381 DSVQTESVKCIVNRA 395 (586)
T ss_dssp STTTTHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHH
Confidence 997777776655543
No 50
>2b4j_C PC4 and SFRS1 interacting protein; HIV, integration, transcription, viral protein, recombinatio; 2.02A {Homo sapiens} SCOP: a.48.4.1 PDB: 3f9k_C 3hpg_G 3u88_C* 3hph_E
Probab=32.29 E-value=33 Score=29.34 Aligned_cols=48 Identities=15% Similarity=0.160 Sum_probs=32.8
Q ss_pred chhHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHcccCcCccccccCC
Q 008341 439 RPETVESLFYLWRLTGNKTYKEWGWNIFQAFEKNSRIESGYVGLKDVN 486 (569)
Q Consensus 439 RPE~IESlfyLyR~TGD~~yre~gW~if~ai~k~~r~~~Gya~l~dV~ 486 (569)
-||.|+.+==+.|..|+...|+.|=.++..|.+.+-++-|..-+.+|.
T Consensus 49 npe~V~t~kklRry~g~q~Ir~kA~~iY~kfK~~f~~~eg~~~~~~~~ 96 (98)
T 2b4j_C 49 HTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVITQVL 96 (98)
T ss_dssp THHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHC--------------
T ss_pred ChHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHhcCCCchHHHHHh
Confidence 489999999999999999999999999999999998888887776653
No 51
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=31.52 E-value=1.3e+02 Score=30.88 Aligned_cols=102 Identities=27% Similarity=0.377 Sum_probs=63.6
Q ss_pred hHHHHH-----HHHHHHHhhcccCCCC-CCcceeecCCCCCCCCCCCCCCccccccccchhhHHHHHH---HhCCchHHH
Q 008341 196 VFLEKA-----RDIADRLLPAWNTRTG-IPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQ---RTGDPKYRQ 266 (569)
Q Consensus 196 ~lL~KA-----~eLadrLlpAFdTptG-iP~~~iNl~~g~~~~~~~~~~~s~lAe~GSl~LEF~~LS~---lTGd~kY~~ 266 (569)
..|+|+ ..+||.|+ +|++|+| =|+. ++..+-......+ ...+=+.+.-..|...|.+ .|++++|.+
T Consensus 23 ~~~~~~~~~w~~~~Ad~~l-~~Q~~~GGW~kn-~d~~~~~~~~~~~---~~~t~DnddTa~vl~~Larv~~~~~~~~y~~ 97 (332)
T 1gxm_A 23 NWLNNARTKWSASRADVVL-SYQQNNGGWPKN-LDYNSVGNGGGGN---ESGTIDNGATITEMVFLAEVYKSGGNTKYRD 97 (332)
T ss_dssp HHHHHHTTSSCGGGHHHHH-HTCCTTSCCCSC-CCTTTCCCCCCCC---SCEECGGGTTHHHHHHHHHHHHHHCCHHHHH
T ss_pred hhhcchHHHHHHHHHHHHH-HcCcCCCCCCcc-eecccccccCCCC---CCCCccCccHHHHHHHHHHHhccccchHHHH
Confidence 366666 45799988 5788875 5553 3332211111111 1222233333445555544 488999999
Q ss_pred HHHHHHHHHhhcCCCCCCcceeecCCCCCCCCCeeeec
Q 008341 267 KAEKVIVELNKTFPADGLLPIYISPDRGTPSYSTITFG 304 (569)
Q Consensus 267 ~a~~i~~~L~~~~~~~GL~p~~id~~tg~~~~~~~t~G 304 (569)
+++|+.+-|..+...+|=+|.+ +++++.+. ++|+|.
T Consensus 98 Ai~Rgl~wlL~mQ~~nGGWpqF-dpd~~~Yl-~~IpFn 133 (332)
T 1gxm_A 98 AVRKAANFLVNSQYSTGALPQF-YPLKGGYS-DHATFN 133 (332)
T ss_dssp HHHHHHHHHHHHCCTTSCCBSE-ESCCSGGG-GSEECG
T ss_pred HHHHHHHHHHhccCCCCCcccc-CCCccccc-ccCCcc
Confidence 9999999999988899999987 45554433 567774
No 52
>3qxf_A Endoglucanase; cellulase, GH8, cellulose synthesis, cellulose degradation,; 1.85A {Escherichia coli k-12} PDB: 3qxq_A*
Probab=30.09 E-value=69 Score=33.33 Aligned_cols=91 Identities=8% Similarity=0.024 Sum_probs=59.6
Q ss_pred hhhhhcCCCCCCCchHHHHHHHHHHHHHHHhhccCCCC----ccceeEeecCCCccccccCCCCCchhHHHHHHHHHhhc
Q 008341 378 MIALGSSGYGPGDSEKFLSLAEELAWTCYNFYQSTPTK----LAGENYFFRDGQDMSVGTSWNILRPETVESLFYLWRLT 453 (569)
Q Consensus 378 mlaLGa~~~~~~~~~~~l~lA~~L~~tC~~~y~~t~tG----l~PE~~~f~~~~~~~~~~~~y~LRPE~IESlfyLyR~T 453 (569)
-|.++++..+ ..+|.+.|+.|...|.+---....| |.|....|..+.. ...++.|.. |.+.|- |..+
T Consensus 103 ALl~A~~~Wg---~~~Y~~~A~~il~~I~~~~v~~~~g~~~~LlpG~~gF~~~~~-~~~nPSY~~-p~~~~~-fa~~--- 173 (355)
T 3qxf_A 103 SLLEAGRLWK---EQRYTDIGSALLKRIAREEVVTVPGLGSMLLPGKVGFAEDNS-WRFNPSYLP-PTLAQY-FTRF--- 173 (355)
T ss_dssp HHHHHHHHTT---CHHHHHHHHHHHHHHHHHHEEEETTTEEEECSSSSSSEETTE-EEECTTSSC-HHHHHH-HGGG---
T ss_pred HHHHHHHHhC---CHHHHHHHHHHHHHHHHhccccCCCCceeecCcccCccCCCC-Ceechhhcc-HHHHHH-HHHh---
Confidence 3556666554 4589999999999987643322234 2565545554432 456888855 766553 3332
Q ss_pred CcchHHHHHHHHHHHHHHHcccCcCcc
Q 008341 454 GNKTYKEWGWNIFQAFEKNSRIESGYV 480 (569)
Q Consensus 454 GD~~yre~gW~if~ai~k~~r~~~Gya 480 (569)
|+.|++.+-...+-|.+.| +.|+.
T Consensus 174 -~~~W~~l~~~~~~lL~~~~--~tGL~ 197 (355)
T 3qxf_A 174 -GAPWTTLRETNQRLLLETA--PKGFS 197 (355)
T ss_dssp -CTTHHHHHHHHHHHHHHTC--TTSCC
T ss_pred -CChHHHHHHHHHHHHHHhh--hcCCC
Confidence 8899999999999998876 55643
No 53
>1wu4_A Xylanase Y; (alpla/alpha)6 barrel, glycoside hydrolase family 8, hydrola; 1.35A {Bacillus halodurans} SCOP: a.102.1.2 PDB: 1wu5_A* 3a3v_A 2drr_A 2drs_A 1wu6_A* 2drq_A 2dro_A
Probab=26.91 E-value=1.2e+02 Score=31.80 Aligned_cols=97 Identities=18% Similarity=0.227 Sum_probs=63.1
Q ss_pred hhhhhcCCCCCC-C-chHHHHHHHHHHHHHHHhhccCC--CCcccee--EeecCCCccccccCCCCCchhHHHHHHHHHh
Q 008341 378 MIALGSSGYGPG-D-SEKFLSLAEELAWTCYNFYQSTP--TKLAGEN--YFFRDGQDMSVGTSWNILRPETVESLFYLWR 451 (569)
Q Consensus 378 mlaLGa~~~~~~-~-~~~~l~lA~~L~~tC~~~y~~t~--tGl~PE~--~~f~~~~~~~~~~~~y~LRPE~IESlfyLyR 451 (569)
-|.++++..+.. . ..+|.+.|+.|...|.+--...+ .-|.|+. +.|..+ -...++.|.+ |- +|-+|.
T Consensus 136 ALl~A~~~Wg~~~g~~~~Y~~~A~~il~~i~~~~~~~~~~~~l~p~~~~~~f~~~--~~~~npSY~~-pa----~~~~fa 208 (396)
T 1wu4_A 136 ALFFASHRWGDGDEQPFNYSEQARKLLHTCVHNGEGGPGHPMWNRDNKLIKFIPE--VEFSDPSYHL-PH----FYELFS 208 (396)
T ss_dssp HHHHHHHHHCCCSSTTCCHHHHHHHHHHHHHHTTSSSSCCCSBCTTTCCBCSSTT--CSEECGGGCC-HH----HHHHHH
T ss_pred HHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHhhccCCCcceecCCCceeeecCC--CCeeChhhcc-HH----HHHHHH
Confidence 344555543311 1 45799999999999986543322 1234554 345443 2556778877 73 444533
Q ss_pred ----hcCcchHHHHHHHHHHHHHHHcccCcCccc
Q 008341 452 ----LTGNKTYKEWGWNIFQAFEKNSRIESGYVG 481 (569)
Q Consensus 452 ----~TGD~~yre~gW~if~ai~k~~r~~~Gya~ 481 (569)
.++|+.|++.+-...+-+.+.|..+.|+..
T Consensus 209 ~~~~~~~~~~W~~~~~~~~~lL~~~~~~~tGL~P 242 (396)
T 1wu4_A 209 LWANEEDRVFWKEAAEASREYLKIACHPETGLAP 242 (396)
T ss_dssp HHSCGGGHHHHHHHHHHHHHHHHHHSCTTTCCCC
T ss_pred HhcccccChhHHHHHHHHHHHHHhcccCCCCCCC
Confidence 678999999999999999998877777543
No 54
>1kwf_A Endoglucanase A; hydrolase, inverting glycosidase, atomic resolution, protein-carbohydrate interactions, reaction mechanism, cellulase; HET: BGC; 0.94A {Clostridium thermocellum} SCOP: a.102.1.2 PDB: 1is9_A 1cem_A
Probab=23.28 E-value=1.5e+02 Score=30.64 Aligned_cols=93 Identities=15% Similarity=0.169 Sum_probs=57.6
Q ss_pred hhhhhcCCCCCCCchHHHHHHHHHHHHHHHhhccCCCC-ccceeEeecCCCccccccCCCCCchhHHHHHHHHHhhcCcc
Q 008341 378 MIALGSSGYGPGDSEKFLSLAEELAWTCYNFYQSTPTK-LAGENYFFRDGQDMSVGTSWNILRPETVESLFYLWRLTGNK 456 (569)
Q Consensus 378 mlaLGa~~~~~~~~~~~l~lA~~L~~tC~~~y~~t~tG-l~PE~~~f~~~~~~~~~~~~y~LRPE~IESlfyLyR~TGD~ 456 (569)
-|.++++..+.....+|.+.|+.|...|.+--....+. |.|... |.. -...++.|.+ |...+ .+.+.|||+
T Consensus 128 ALl~A~~~W~~~g~~~Y~~~A~~i~~~i~~~~~~~~~~~l~pg~~-~~~---~~~~npSY~~-p~~~~---~fa~~~~~~ 199 (363)
T 1kwf_A 128 ALIFADKLWGSSGAINYGQEARTLINNLYNHCVEHGSYVLKPGDR-WGG---SSVTNPSYFA-PAWYK---VYAQYTGDT 199 (363)
T ss_dssp HHHHHHHHHCSSSSSCHHHHHHHHHHHHHHHHBCTTTCCBCSBSS-SCB---TTBBCGGGCC-HHHHH---HHHHHHCCT
T ss_pred HHHHHHHHhCCCcchhHHHHHHHHHHHHHHHhccCCCeEEecccc-CCC---CCEecchhcC-HHHHH---HHHHccCCc
Confidence 35556654432222379999999998887643321111 233221 211 1345677877 77766 345678999
Q ss_pred hHHHHHHHHHHHHHHHc--ccCcC
Q 008341 457 TYKEWGWNIFQAFEKNS--RIESG 478 (569)
Q Consensus 457 ~yre~gW~if~ai~k~~--r~~~G 478 (569)
.|++..-...+-+.+.| -.+.|
T Consensus 200 ~W~~~~~~~~~~l~~~~~~~~~tG 223 (363)
T 1kwf_A 200 RWNQVADKCYQIVEEVKKYNNGTG 223 (363)
T ss_dssp HHHHHHHHHHHHHHHHTTTSTTSC
T ss_pred hHHHHHHHHHHHHHHHhhhcCCCC
Confidence 99999999999998888 33446
No 55
>1h12_A Endo-1,4-beta-xylanase; hydrolase, xylan degradation, psychrophilic, cold adaptation, temperature, glycosyl hydrolase, family 8; HET: XYP XYS; 1.2A {Pseudoalteromonas haloplanktis} SCOP: a.102.1.2 PDB: 1h13_A 1xw2_A 1xwq_A* 1h14_A 1xwt_A 2b4f_A* 2a8z_A*
Probab=22.35 E-value=90 Score=32.89 Aligned_cols=88 Identities=16% Similarity=0.104 Sum_probs=58.9
Q ss_pred hhhhhcCCCCCCCchHHHHHHHHHHHHHHHhhccCCCCcccee--EeecCCCccccccCCCCCchhHHHHHHHHHhhcCc
Q 008341 378 MIALGSSGYGPGDSEKFLSLAEELAWTCYNFYQSTPTKLAGEN--YFFRDGQDMSVGTSWNILRPETVESLFYLWRLTGN 455 (569)
Q Consensus 378 mlaLGa~~~~~~~~~~~l~lA~~L~~tC~~~y~~t~tGl~PE~--~~f~~~~~~~~~~~~y~LRPE~IESlfyLyR~TGD 455 (569)
-|.++++..+.....+|.+.|+.|...|.+-- |+. +.|.++.. ...++.|.+ |-+.| ++.++|+|
T Consensus 152 ALl~A~~~Wg~~g~~~Y~~~A~~il~~I~~~~--------~~~~~~~f~p~~~-~~~npSY~~-pa~~~---~fa~~~~~ 218 (405)
T 1h12_A 152 ALLNASARWGNSGEFNYYNDAITMLNTIKNKL--------MENQIIRFSPYID-NLTDPSYHI-PAFYD---YFANNVTN 218 (405)
T ss_dssp HHHHHHHHHCSSSSCCHHHHHHHHHHHHHHHS--------EETTEECSCTTCS-SCBCGGGCC-HHHHH---HHHHHCSS
T ss_pred HHHHHHHHcCCCCchhHHHHHHHHHHHHHHhC--------CCCCeeEEecCCC-CeeChhhcC-HHHHH---HHHHhccc
Confidence 35556654432224579999999999887654 332 55555443 556778877 75544 22567877
Q ss_pred ----chHHHHHHHHHHHHHHHcccCcC
Q 008341 456 ----KTYKEWGWNIFQAFEKNSRIESG 478 (569)
Q Consensus 456 ----~~yre~gW~if~ai~k~~r~~~G 478 (569)
+.|++.+-...+-|.+.|-.+.|
T Consensus 219 ~~~~~~W~~v~~~~~~lL~~~~~~~tG 245 (405)
T 1h12_A 219 QADKNYWRQVATKSRTLLKNHFTKVSG 245 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred ccCchhHHHHHHHHHHHHHHhcCCCCC
Confidence 88999999998888888764456
No 56
>1rh5_C Secbeta; protein translocation, SECY, membrane protein, protein channels, protein transport; 3.20A {Methanocaldococcus jannaschii} SCOP: f.23.29.1 PDB: 1rhz_C 2yxq_C 2yxr_C 3kcr_C 3dkn_C 3bo1_C 3bo0_C
Probab=21.74 E-value=62 Score=24.58 Aligned_cols=44 Identities=18% Similarity=0.465 Sum_probs=9.8
Q ss_pred CCCcCCCCCCCCCCcccccCc-ccccc-cchhHHHHHHHHHHHHHH
Q 008341 1 MARNRSSSSSSSSGKLRYCNP-AYYLK-RPKRLAMLLIVFVSVTLV 44 (569)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~l~~~~~~~~~~~~~ 44 (569)
|||++-+...||.|-+||..= .-=+| .|+..+.+.++|..++++
T Consensus 1 Mak~~~~~~~ssaGLvryy~ee~~giKi~P~~Vl~~si~~i~~V~~ 46 (53)
T 1rh5_C 1 MSKREETGLATSAGLIRYMDETFSKIRVKPEHVIGVTVAFVIIEAI 46 (53)
T ss_dssp --------------------CCCCSCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCccCCCCcccccchhhhhccCCccccCCeehhhhHHHHHHHHHH
Confidence 888876544456788998532 11233 344444444555544443
Done!