Query 008342
Match_columns 569
No_of_seqs 178 out of 2271
Neff 10.4
Searched_HMMs 46136
Date Thu Mar 28 22:36:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008342.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008342hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176 Acyl-CoA synthetase [L 100.0 3.4E-80 7.4E-85 622.9 47.9 519 9-561 5-535 (537)
2 COG0365 Acs Acyl-coenzyme A sy 100.0 2.4E-76 5.3E-81 591.4 49.3 491 25-558 14-522 (528)
3 KOG1177 Long chain fatty acid 100.0 9.9E-77 2.1E-81 555.1 42.7 522 15-561 45-590 (596)
4 COG0318 CaiC Acyl-CoA syntheta 100.0 2.9E-75 6.3E-80 609.8 52.0 509 16-558 7-527 (534)
5 COG1021 EntE Peptide arylation 100.0 3.2E-73 7E-78 519.5 34.0 506 16-560 24-540 (542)
6 PLN03102 acyl-activating enzym 100.0 5.1E-71 1.1E-75 586.1 55.8 546 7-560 1-556 (579)
7 PTZ00237 acetyl-CoA synthetase 100.0 3.9E-71 8.4E-76 591.9 52.5 518 22-560 61-625 (647)
8 PRK07788 acyl-CoA synthetase; 100.0 2.5E-71 5.3E-76 587.1 50.3 496 20-555 49-548 (549)
9 PLN02479 acetate-CoA ligase 100.0 1.9E-70 4E-75 581.6 55.9 563 1-563 1-563 (567)
10 TIGR02316 propion_prpE propion 100.0 5.1E-70 1.1E-74 584.0 55.1 517 23-560 55-606 (628)
11 PLN02654 acetate-CoA ligase 100.0 4.5E-70 9.7E-75 585.7 53.6 520 20-559 87-641 (666)
12 PLN02860 o-succinylbenzoate-Co 100.0 7.8E-70 1.7E-74 576.4 51.0 525 15-559 2-555 (563)
13 PRK07529 AMP-binding domain pr 100.0 1.5E-69 3.1E-74 579.9 53.4 517 17-562 22-574 (632)
14 PLN02736 long-chain acyl-CoA s 100.0 7.4E-70 1.6E-74 584.7 46.4 521 16-559 40-642 (651)
15 PRK13295 cyclohexanecarboxylat 100.0 1.6E-68 3.6E-73 565.0 54.3 508 12-559 16-545 (547)
16 PRK08162 acyl-CoA synthetase; 100.0 3.4E-68 7.3E-73 563.3 55.6 540 7-563 5-544 (545)
17 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 1.7E-68 3.7E-73 573.3 53.4 513 21-559 58-603 (625)
18 PLN02614 long-chain acyl-CoA s 100.0 3.4E-69 7.5E-74 577.6 46.0 517 20-559 45-650 (666)
19 PRK06334 long chain fatty acid 100.0 1.6E-68 3.5E-73 562.0 49.8 505 9-559 8-536 (539)
20 PRK13382 acyl-CoA synthetase; 100.0 3.3E-68 7.1E-73 560.7 51.8 492 19-554 42-536 (537)
21 PRK06839 acyl-CoA synthetase; 100.0 8E-68 1.7E-72 554.6 53.0 490 21-558 3-495 (496)
22 PRK00174 acetyl-CoA synthetase 100.0 7.9E-68 1.7E-72 568.9 53.7 510 23-559 70-611 (637)
23 PRK07470 acyl-CoA synthetase; 100.0 1.1E-67 2.4E-72 557.1 53.8 517 17-566 4-526 (528)
24 PRK06187 long-chain-fatty-acid 100.0 1.3E-67 2.8E-72 556.9 53.9 517 16-559 2-520 (521)
25 PRK05605 long-chain-fatty-acid 100.0 9E-68 1.9E-72 562.9 52.9 517 16-559 28-570 (573)
26 PRK06155 crotonobetaine/carnit 100.0 1.6E-67 3.5E-72 555.7 52.9 510 12-561 13-527 (542)
27 PRK04319 acetyl-CoA synthetase 100.0 7.3E-68 1.6E-72 562.5 50.6 505 20-559 42-560 (570)
28 PRK03640 O-succinylbenzoic aci 100.0 1.6E-67 3.4E-72 550.3 52.1 480 20-558 2-482 (483)
29 PRK08314 long-chain-fatty-acid 100.0 1.2E-67 2.6E-72 559.4 51.8 515 16-558 6-542 (546)
30 PRK10524 prpE propionyl-CoA sy 100.0 2.2E-67 4.8E-72 565.0 54.3 517 22-559 55-606 (629)
31 PRK05857 acyl-CoA synthetase; 100.0 7.9E-68 1.7E-72 558.2 49.8 520 11-561 5-534 (540)
32 PRK05677 long-chain-fatty-acid 100.0 2.5E-67 5.4E-72 557.5 53.4 513 19-560 23-559 (562)
33 PLN02246 4-coumarate--CoA liga 100.0 2.3E-67 4.9E-72 555.3 52.3 504 19-558 22-536 (537)
34 PRK07008 long-chain-fatty-acid 100.0 4.6E-67 9.9E-72 552.6 53.1 520 18-561 8-536 (539)
35 PRK07656 long-chain-fatty-acid 100.0 5.2E-67 1.1E-71 551.0 53.3 505 18-554 3-512 (513)
36 PLN02574 4-coumarate--CoA liga 100.0 1.9E-67 4.1E-72 557.8 49.8 507 20-563 40-559 (560)
37 TIGR01217 ac_ac_CoA_syn acetoa 100.0 4.5E-67 9.8E-72 561.7 52.3 505 27-559 91-627 (652)
38 PLN02861 long-chain-fatty-acid 100.0 1.1E-67 2.5E-72 566.5 46.0 518 19-560 42-648 (660)
39 PRK07638 acyl-CoA synthetase; 100.0 4.8E-67 1E-71 546.6 49.5 480 20-560 1-483 (487)
40 PLN03052 acetate--CoA ligase; 100.0 1.6E-66 3.6E-71 559.0 54.0 515 20-561 174-724 (728)
41 PRK07786 long-chain-fatty-acid 100.0 1.3E-66 2.8E-71 549.9 52.3 511 18-565 15-531 (542)
42 PRK03584 acetoacetyl-CoA synth 100.0 1.2E-66 2.6E-71 561.1 53.0 511 21-562 87-629 (655)
43 PRK08316 acyl-CoA synthetase; 100.0 4E-66 8.7E-71 545.6 54.0 509 18-560 9-521 (523)
44 PRK05852 acyl-CoA synthetase; 100.0 1.1E-66 2.3E-71 549.8 49.1 509 18-558 14-532 (534)
45 PRK06018 putative acyl-CoA syn 100.0 5E-66 1.1E-70 545.4 53.4 521 17-559 7-535 (542)
46 PRK09274 peptide synthase; Pro 100.0 7.4E-67 1.6E-71 553.6 47.2 509 19-559 5-549 (552)
47 PRK08315 AMP-binding domain pr 100.0 5.2E-66 1.1E-70 548.5 53.3 525 14-565 10-558 (559)
48 PRK05620 long-chain-fatty-acid 100.0 4.5E-66 9.7E-71 549.5 52.0 530 16-562 6-561 (576)
49 PRK06145 acyl-CoA synthetase; 100.0 9.3E-66 2E-70 538.8 53.1 491 20-557 2-496 (497)
50 PRK06188 acyl-CoA synthetase; 100.0 1.1E-65 2.4E-70 541.4 53.3 509 18-562 10-521 (524)
51 PRK06087 short chain acyl-CoA 100.0 1.1E-65 2.4E-70 544.0 53.4 510 16-560 19-538 (547)
52 PRK12583 acyl-CoA synthetase; 100.0 1.8E-65 4E-70 544.4 55.2 515 17-559 15-553 (558)
53 PRK06060 acyl-CoA synthetase; 100.0 2E-66 4.4E-71 563.6 48.6 477 21-556 5-490 (705)
54 PRK07867 acyl-CoA synthetase; 100.0 1.2E-65 2.6E-70 539.5 52.8 489 19-559 4-508 (529)
55 PTZ00342 acyl-CoA synthetase; 100.0 1.6E-66 3.5E-71 554.9 46.9 516 17-558 58-734 (746)
56 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 1.3E-65 2.8E-70 540.7 52.6 501 16-553 19-527 (527)
57 PRK07769 long-chain-fatty-acid 100.0 4.2E-66 9.1E-71 554.9 48.0 506 18-560 19-616 (631)
58 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 1.6E-65 3.5E-70 541.4 51.5 502 16-553 18-537 (538)
59 TIGR03098 ligase_PEP_1 acyl-Co 100.0 3.2E-65 7E-70 537.5 51.8 499 21-554 1-514 (515)
60 PLN02330 4-coumarate--CoA liga 100.0 2.3E-65 4.9E-70 540.9 50.6 502 18-559 26-542 (546)
61 PRK07514 malonyl-CoA synthase; 100.0 1E-64 2.2E-69 532.1 53.7 496 19-559 2-502 (504)
62 PRK08008 caiC putative crotono 100.0 9.8E-65 2.1E-69 533.5 52.0 499 20-553 7-517 (517)
63 PLN02387 long-chain-fatty-acid 100.0 1.1E-65 2.4E-70 553.3 45.2 520 19-560 57-691 (696)
64 PRK10946 entE enterobactin syn 100.0 1.4E-64 3E-69 533.3 52.4 501 16-560 21-534 (536)
65 PRK13388 acyl-CoA synthetase; 100.0 1.1E-64 2.5E-69 533.8 51.6 488 20-561 3-509 (540)
66 PRK12492 long-chain-fatty-acid 100.0 1.1E-64 2.3E-69 537.4 51.6 508 19-555 23-561 (562)
67 PRK06164 acyl-CoA synthetase; 100.0 1.5E-64 3.2E-69 534.9 52.2 521 16-563 6-537 (540)
68 PRK12476 putative fatty-acid-- 100.0 3E-65 6.6E-70 545.9 47.3 504 18-560 32-608 (612)
69 PRK09088 acyl-CoA synthetase; 100.0 8.7E-65 1.9E-69 530.0 49.2 477 27-559 2-486 (488)
70 PLN02430 long-chain-fatty-acid 100.0 4.1E-65 9E-70 545.5 45.8 518 18-559 40-647 (660)
71 TIGR03443 alpha_am_amid L-amin 100.0 2.8E-65 6E-70 594.4 48.2 517 19-554 235-824 (1389)
72 PRK06178 acyl-CoA synthetase; 100.0 5.9E-64 1.3E-68 532.9 53.5 522 16-559 29-566 (567)
73 PRK08279 long-chain-acyl-CoA s 100.0 4.1E-64 8.9E-69 537.1 51.0 506 16-561 33-567 (600)
74 PRK06710 long-chain-fatty-acid 100.0 7.5E-64 1.6E-68 531.6 51.8 514 19-560 23-557 (563)
75 PRK13383 acyl-CoA synthetase; 100.0 7.7E-64 1.7E-68 525.8 49.6 478 18-553 33-515 (516)
76 PRK05851 long-chain-fatty-acid 100.0 9.7E-65 2.1E-69 532.8 42.7 489 20-559 1-523 (525)
77 PRK08043 bifunctional acyl-[ac 100.0 2.9E-64 6.2E-69 546.9 47.5 495 18-560 202-715 (718)
78 KOG1175 Acyl-CoA synthetase [L 100.0 3.9E-64 8.5E-69 503.4 43.6 506 24-559 68-603 (626)
79 PRK07059 Long-chain-fatty-acid 100.0 2E-63 4.3E-68 527.7 51.5 511 16-555 19-555 (557)
80 PRK08751 putative long-chain f 100.0 1.7E-63 3.7E-68 528.8 50.9 508 19-555 24-557 (560)
81 PRK08633 2-acyl-glycerophospho 100.0 4.2E-64 9E-69 577.4 49.7 515 16-559 611-1144(1146)
82 TIGR03205 pimA dicarboxylate-- 100.0 6.6E-63 1.4E-67 521.8 53.1 509 19-553 20-541 (541)
83 TIGR01734 D-ala-DACP-lig D-ala 100.0 2.1E-63 4.6E-68 521.8 48.4 490 21-557 1-501 (502)
84 PRK12467 peptide synthase; Pro 100.0 6.8E-65 1.5E-69 627.6 43.1 488 19-558 3094-3594(3956)
85 TIGR02262 benz_CoA_lig benzoat 100.0 5.7E-63 1.2E-67 518.7 50.3 496 22-554 6-507 (508)
86 PRK10252 entF enterobactin syn 100.0 9.9E-64 2.1E-68 579.7 48.8 492 16-555 454-964 (1296)
87 COG1022 FAA1 Long-chain acyl-C 100.0 1E-63 2.2E-68 507.1 40.3 503 18-560 14-603 (613)
88 PRK07798 acyl-CoA synthetase; 100.0 3.2E-62 7E-67 517.2 52.8 503 19-558 2-532 (533)
89 PRK13390 acyl-CoA synthetase; 100.0 2.8E-62 6E-67 512.6 48.0 482 28-553 5-501 (501)
90 PRK08180 feruloyl-CoA synthase 100.0 7.2E-63 1.6E-67 527.4 44.2 507 11-560 30-598 (614)
91 PRK12467 peptide synthase; Pro 100.0 3.4E-63 7.4E-68 612.5 47.6 495 17-557 509-1017(3956)
92 PRK04813 D-alanine--poly(phosp 100.0 3E-62 6.5E-67 513.6 47.1 491 20-557 2-502 (503)
93 PRK12316 peptide synthase; Pro 100.0 4.9E-63 1.1E-67 620.3 48.5 483 19-557 510-1005(5163)
94 PTZ00216 acyl-CoA synthetase; 100.0 1.4E-62 3.1E-67 530.6 45.6 511 19-560 68-693 (700)
95 PRK08974 long-chain-fatty-acid 100.0 1.6E-61 3.5E-66 513.4 52.9 511 20-559 23-556 (560)
96 PRK07787 acyl-CoA synthetase; 100.0 1.7E-62 3.8E-67 509.6 44.3 454 31-554 11-469 (471)
97 PRK12316 peptide synthase; Pro 100.0 6.3E-63 1.4E-67 619.4 47.1 488 19-556 2002-2502(5163)
98 KOG1256 Long-chain acyl-CoA sy 100.0 1.8E-62 3.9E-67 489.5 40.6 522 16-560 71-682 (691)
99 PRK09029 O-succinylbenzoic aci 100.0 5.6E-62 1.2E-66 504.2 44.9 446 27-561 10-456 (458)
100 PRK07445 O-succinylbenzoic aci 100.0 4.8E-62 1E-66 500.4 43.8 431 44-561 18-450 (452)
101 PRK13391 acyl-CoA synthetase; 100.0 3.2E-61 6.9E-66 505.7 51.0 494 26-558 3-509 (511)
102 PRK12406 long-chain-fatty-acid 100.0 3.4E-61 7.4E-66 505.4 50.8 492 37-562 3-507 (509)
103 PRK05691 peptide synthase; Val 100.0 1.2E-62 2.7E-67 612.9 46.7 493 19-555 3719-4225(4334)
104 PLN03051 acyl-activating enzym 100.0 2.2E-61 4.8E-66 503.8 44.6 459 77-562 1-495 (499)
105 PRK07868 acyl-CoA synthetase; 100.0 7.6E-61 1.6E-65 531.7 51.1 492 17-557 444-957 (994)
106 PRK08276 long-chain-fatty-acid 100.0 2E-60 4.3E-65 499.0 49.2 485 37-560 3-498 (502)
107 PRK05691 peptide synthase; Val 100.0 1.3E-61 2.7E-66 603.9 46.3 484 17-555 1128-1625(4334)
108 PRK06814 acylglycerophosphoeth 100.0 2.6E-60 5.6E-65 543.6 51.8 497 19-562 630-1136(1140)
109 PRK12582 acyl-CoA synthetase; 100.0 1.6E-60 3.4E-65 510.3 44.8 501 17-560 46-609 (624)
110 PRK05850 acyl-CoA synthetase; 100.0 8.6E-60 1.9E-64 502.1 47.3 507 20-563 1-573 (578)
111 TIGR01923 menE O-succinylbenzo 100.0 1E-59 2.3E-64 485.0 42.6 435 47-552 1-436 (436)
112 PRK09192 acyl-CoA synthetase; 100.0 2.8E-59 6.1E-64 497.4 45.4 500 19-561 20-569 (579)
113 KOG1180 Acyl-CoA synthetase [L 100.0 3.4E-59 7.4E-64 444.7 33.5 520 19-560 40-671 (678)
114 PRK08308 acyl-CoA synthetase; 100.0 8.9E-58 1.9E-62 466.0 44.0 406 38-553 1-408 (414)
115 PRK07768 long-chain-fatty-acid 100.0 1.6E-57 3.4E-62 481.5 44.7 494 21-557 3-544 (545)
116 KOG1179 Very long-chain acyl-C 100.0 8.1E-55 1.8E-59 416.8 40.5 501 17-555 74-610 (649)
117 PF00501 AMP-binding: AMP-bind 100.0 2.2E-55 4.8E-60 450.1 35.1 400 26-459 1-417 (417)
118 TIGR01733 AA-adenyl-dom amino 100.0 6.3E-51 1.4E-55 416.1 37.5 393 47-483 1-408 (408)
119 PRK07824 O-succinylbenzoic aci 100.0 9.5E-47 2.1E-51 377.3 34.4 320 192-558 32-357 (358)
120 PTZ00297 pantothenate kinase; 100.0 4E-46 8.7E-51 413.1 42.0 481 19-560 426-997 (1452)
121 COG1020 EntF Non-ribosomal pep 100.0 1.1E-38 2.4E-43 344.0 38.2 409 19-476 226-642 (642)
122 TIGR02372 4_coum_CoA_lig 4-cou 100.0 2.3E-38 4.9E-43 314.4 31.0 287 195-548 95-386 (386)
123 TIGR02155 PA_CoA_ligase phenyl 100.0 1.2E-36 2.6E-41 310.3 28.5 323 193-550 73-418 (422)
124 KOG1178 Non-ribosomal peptide 100.0 2.3E-32 4.9E-37 288.3 25.2 505 21-560 37-581 (1032)
125 KOG3628 Predicted AMP-binding 100.0 8.2E-30 1.8E-34 260.4 39.2 513 20-566 770-1359(1363)
126 TIGR03335 F390_ftsA coenzyme F 100.0 6.3E-30 1.4E-34 260.7 29.1 322 193-549 84-440 (445)
127 COG1541 PaaK Coenzyme F390 syn 100.0 9.8E-28 2.1E-32 231.1 28.2 323 192-549 87-430 (438)
128 TIGR03089 conserved hypothetic 99.9 6.9E-26 1.5E-30 208.3 20.9 218 26-285 2-227 (227)
129 PRK09188 serine/threonine prot 99.9 5.3E-21 1.1E-25 185.7 14.3 119 426-558 205-328 (365)
130 KOG3628 Predicted AMP-binding 99.8 1.6E-18 3.5E-23 178.5 24.4 500 21-561 95-707 (1363)
131 TIGR02304 aden_form_hyp probab 99.8 6E-17 1.3E-21 161.3 25.6 254 197-502 101-378 (430)
132 PF13193 AMP-binding_C: AMP-bi 99.2 2.5E-11 5.5E-16 89.8 6.4 69 467-546 1-73 (73)
133 PF04443 LuxE: Acyl-protein sy 99.0 4.7E-08 1E-12 95.7 18.6 227 193-454 87-350 (365)
134 PF03321 GH3: GH3 auxin-respon 98.6 3.9E-07 8.5E-12 94.6 13.2 89 400-504 355-452 (528)
135 PF14535 AMP-binding_C_2: AMP- 97.9 4.5E-05 9.7E-10 59.5 7.5 85 460-549 1-91 (96)
136 PLN02247 indole-3-acetic acid- 97.8 0.0028 6.2E-08 65.8 20.5 59 401-475 402-464 (606)
137 PLN02249 indole-3-acetic acid- 97.8 0.0018 3.8E-08 67.9 18.6 58 401-474 395-456 (597)
138 PLN02620 indole-3-acetic acid- 97.5 0.0055 1.2E-07 63.6 16.6 58 401-474 408-469 (612)
139 COG1541 PaaK Coenzyme F390 syn 95.9 0.084 1.8E-06 52.6 11.0 94 44-138 108-203 (438)
140 TIGR03335 F390_ftsA coenzyme F 87.6 4.7 0.0001 41.5 10.6 80 45-127 105-186 (445)
141 TIGR02155 PA_CoA_ligase phenyl 87.4 4.3 9.4E-05 41.5 10.3 88 45-133 94-183 (422)
142 TIGR03089 conserved hypothetic 79.9 9.9 0.00022 35.0 8.3 76 34-118 149-226 (227)
143 PLN02736 long-chain acyl-CoA s 76.6 49 0.0011 36.1 13.8 99 213-317 77-179 (651)
144 PRK02261 methylaspartate mutas 73.2 23 0.00049 29.6 7.8 100 238-343 6-119 (137)
145 PRK07656 long-chain-fatty-acid 72.8 26 0.00056 36.7 10.3 84 44-131 184-269 (513)
146 TIGR03590 PseG pseudaminic aci 72.2 50 0.0011 31.5 11.1 99 44-158 10-113 (279)
147 PF00501 AMP-binding: AMP-bind 68.5 53 0.0012 33.2 11.2 88 193-289 8-99 (417)
148 KOG1177 Long chain fatty acid 68.3 62 0.0013 33.0 10.5 93 32-127 231-334 (596)
149 PRK08315 AMP-binding domain pr 66.9 48 0.0011 35.2 10.9 82 44-128 217-300 (559)
150 PLN02387 long-chain-fatty-acid 66.0 61 0.0013 35.7 11.6 102 212-319 104-209 (696)
151 PRK12583 acyl-CoA synthetase; 65.6 58 0.0013 34.6 11.2 82 44-128 219-302 (558)
152 PRK06334 long chain fatty acid 65.4 59 0.0013 34.5 11.1 97 33-132 181-288 (539)
153 PRK06187 long-chain-fatty-acid 65.2 37 0.0008 35.5 9.5 84 45-132 186-270 (521)
154 PLN02556 cysteine synthase/L-3 64.9 1.3E+02 0.0029 29.9 12.6 62 64-125 103-165 (368)
155 PTZ00342 acyl-CoA synthetase; 62.9 79 0.0017 35.1 11.6 101 213-319 90-208 (746)
156 PTZ00237 acetyl-CoA synthetase 61.0 84 0.0018 34.2 11.5 78 213-291 91-172 (647)
157 PLN03052 acetate--CoA ligase; 59.3 1E+02 0.0022 34.3 11.7 97 194-292 189-289 (728)
158 PRK09274 peptide synthase; Pro 59.2 97 0.0021 32.8 11.5 80 211-291 38-121 (552)
159 TIGR01923 menE O-succinylbenzo 58.3 60 0.0013 33.0 9.4 80 44-129 129-209 (436)
160 PRK04319 acetyl-CoA synthetase 58.3 79 0.0017 33.7 10.6 85 44-131 223-309 (570)
161 TIGR01733 AA-adenyl-dom amino 58.1 99 0.0021 31.0 10.9 98 34-134 119-228 (408)
162 PLN02614 long-chain acyl-CoA s 56.6 1.3E+02 0.0028 33.0 11.9 86 213-299 78-167 (666)
163 TIGR03098 ligase_PEP_1 acyl-Co 56.3 70 0.0015 33.4 9.7 84 44-131 179-263 (515)
164 cd00640 Trp-synth-beta_II Tryp 54.9 1.8E+02 0.0038 26.9 12.5 94 34-130 14-109 (244)
165 PLN02654 acetate-CoA ligase 54.7 1.2E+02 0.0026 33.1 11.4 79 213-292 119-201 (666)
166 PLN03051 acyl-activating enzym 54.4 73 0.0016 33.3 9.4 85 44-131 137-222 (499)
167 COG0399 WecE Predicted pyridox 54.3 44 0.00095 33.3 7.0 65 55-123 59-128 (374)
168 TIGR02370 pyl_corrinoid methyl 54.0 1.2E+02 0.0027 27.0 9.4 90 238-330 86-185 (197)
169 TIGR01217 ac_ac_CoA_syn acetoa 53.6 1.3E+02 0.0028 32.8 11.4 78 213-291 113-194 (652)
170 PRK03584 acetoacetyl-CoA synth 53.4 1.4E+02 0.0029 32.7 11.6 79 213-292 113-195 (655)
171 PF01041 DegT_DnrJ_EryC1: DegT 53.4 59 0.0013 32.4 8.1 65 57-125 52-121 (363)
172 PRK11761 cysM cysteine synthas 53.0 1.7E+02 0.0036 28.2 10.8 88 35-125 27-117 (296)
173 PLN03102 acyl-activating enzym 52.9 77 0.0017 33.9 9.4 82 214-296 39-124 (579)
174 COG0436 Aspartate/tyrosine/aro 52.9 2.6E+02 0.0056 28.2 13.1 67 56-124 72-141 (393)
175 PLN02565 cysteine synthase 52.6 2.3E+02 0.005 27.6 11.8 89 36-126 31-122 (322)
176 COG4009 Uncharacterized protei 52.6 53 0.0012 23.9 5.2 66 44-120 8-76 (88)
177 PLN02860 o-succinylbenzoate-Co 51.9 1.2E+02 0.0026 32.2 10.7 96 33-132 170-275 (563)
178 PF09580 Spore_YhcN_YlaJ: Spor 51.3 55 0.0012 28.6 6.6 57 464-527 76-132 (177)
179 COG2062 SixA Phosphohistidine 50.9 53 0.0011 28.3 6.1 90 26-117 6-98 (163)
180 TIGR02188 Ac_CoA_lig_AcsA acet 50.7 1.5E+02 0.0032 32.1 11.3 95 194-292 71-169 (625)
181 PRK07529 AMP-binding domain pr 49.8 1.3E+02 0.0029 32.5 10.7 94 194-290 39-136 (632)
182 PRK08308 acyl-CoA synthetase; 49.5 1.7E+02 0.0037 29.5 11.0 84 44-131 119-204 (414)
183 PRK03640 O-succinylbenzoic aci 49.5 1.3E+02 0.0029 31.0 10.4 83 45-131 160-243 (483)
184 PRK06155 crotonobetaine/carnit 49.1 1.2E+02 0.0026 32.1 10.1 85 214-299 46-134 (542)
185 PRK07788 acyl-CoA synthetase; 49.0 1.1E+02 0.0024 32.4 9.9 84 214-298 74-161 (549)
186 PLN02861 long-chain-fatty-acid 48.8 1.3E+02 0.0029 32.8 10.5 85 213-298 76-164 (660)
187 PRK00174 acetyl-CoA synthetase 48.8 1.6E+02 0.0035 31.9 11.2 80 212-292 96-179 (637)
188 PRK06381 threonine synthase; V 48.7 1.9E+02 0.004 28.2 10.6 99 26-130 21-122 (319)
189 PRK08316 acyl-CoA synthetase; 48.6 1.5E+02 0.0033 31.0 10.8 85 213-298 35-123 (523)
190 PLN02430 long-chain-fatty-acid 48.3 2E+02 0.0043 31.5 11.8 84 214-298 76-163 (660)
191 PRK10877 protein disulfide iso 47.6 1.3E+02 0.0027 27.8 8.6 90 435-542 55-147 (232)
192 TIGR02316 propion_prpE propion 46.3 1.8E+02 0.0039 31.5 11.0 78 213-291 82-163 (628)
193 cd02069 methionine_synthase_B1 46.1 1.2E+02 0.0026 27.5 8.1 90 236-330 89-187 (213)
194 PRK06164 acyl-CoA synthetase; 45.7 1.6E+02 0.0034 31.1 10.4 94 34-131 180-283 (540)
195 PRK13295 cyclohexanecarboxylat 45.4 1.8E+02 0.004 30.7 10.8 82 210-292 51-136 (547)
196 PRK07638 acyl-CoA synthetase; 44.9 1.4E+02 0.0031 30.8 9.8 85 44-132 161-246 (487)
197 KOG1176 Acyl-CoA synthetase [L 44.6 83 0.0018 33.2 7.6 88 212-300 43-136 (537)
198 TIGR02379 ECA_wecE TDP-4-keto- 44.5 89 0.0019 31.3 7.7 59 62-124 63-126 (376)
199 COG0365 Acs Acyl-coenzyme A sy 44.4 1.4E+02 0.003 31.5 9.2 96 196-296 25-125 (528)
200 TIGR02898 spore_YhcN_YlaJ spor 44.1 1.3E+02 0.0027 25.8 7.3 57 465-526 56-112 (158)
201 PRK05857 acyl-CoA synthetase; 44.0 1.6E+02 0.0036 31.0 10.2 80 213-293 40-123 (540)
202 PRK10524 prpE propionyl-CoA sy 43.6 2.2E+02 0.0047 30.9 11.2 78 213-291 83-164 (629)
203 PRK07798 acyl-CoA synthetase; 43.5 3.6E+02 0.0079 28.1 12.8 86 213-300 27-117 (533)
204 PRK06839 acyl-CoA synthetase; 43.4 3E+02 0.0065 28.4 12.0 86 212-298 25-115 (496)
205 PRK05850 acyl-CoA synthetase; 43.1 3.1E+02 0.0066 29.2 12.2 84 213-298 34-124 (578)
206 PLN02246 4-coumarate--CoA liga 42.9 1.6E+02 0.0035 31.0 9.9 84 213-297 49-136 (537)
207 cd06448 L-Ser-dehyd Serine deh 42.9 2.8E+02 0.0061 27.0 10.7 89 35-126 16-106 (316)
208 PRK13388 acyl-CoA synthetase; 42.7 2.7E+02 0.006 29.3 11.6 83 214-297 26-113 (540)
209 PRK08314 long-chain-fatty-acid 42.5 1.5E+02 0.0032 31.4 9.5 84 214-298 35-123 (546)
210 PRK02261 methylaspartate mutas 42.5 2E+02 0.0043 23.9 10.1 44 83-126 20-63 (137)
211 PRK11706 TDP-4-oxo-6-deoxy-D-g 42.0 99 0.0021 30.9 7.7 57 64-124 65-126 (375)
212 TIGR02262 benz_CoA_lig benzoat 41.9 2E+02 0.0043 30.0 10.4 94 33-128 159-263 (508)
213 PRK05605 long-chain-fatty-acid 41.6 1.5E+02 0.0033 31.5 9.6 83 214-297 57-143 (573)
214 PRK13383 acyl-CoA synthetase; 41.2 1.8E+02 0.0039 30.5 9.9 84 214-298 60-147 (516)
215 PLN02550 threonine dehydratase 41.0 4.5E+02 0.0098 28.2 12.3 99 30-133 119-219 (591)
216 PLN02330 4-coumarate--CoA liga 40.8 1.8E+02 0.0039 30.8 9.9 83 213-296 54-140 (546)
217 PF05728 UPF0227: Uncharacteri 40.3 1.7E+02 0.0036 26.0 7.9 97 6-113 4-101 (187)
218 KOG0023 Alcohol dehydrogenase, 39.9 1.6E+02 0.0034 28.6 7.8 76 61-139 173-248 (360)
219 PLN03013 cysteine synthase 39.9 3.4E+02 0.0073 27.8 10.8 65 62-126 165-230 (429)
220 cd01445 TST_Repeats Thiosulfat 39.7 79 0.0017 26.3 5.5 41 56-96 81-124 (138)
221 KOG1250 Threonine/serine dehyd 39.6 3.8E+02 0.0082 26.8 10.4 56 72-129 117-172 (457)
222 PRK08043 bifunctional acyl-[ac 39.5 2.1E+02 0.0045 31.7 10.4 92 33-127 363-465 (718)
223 PRK06188 acyl-CoA synthetase; 39.0 1.7E+02 0.0037 30.7 9.3 82 44-129 186-267 (524)
224 PRK07514 malonyl-CoA synthase; 38.8 2E+02 0.0044 29.8 9.9 84 213-297 27-114 (504)
225 PRK05620 long-chain-fatty-acid 38.5 2.5E+02 0.0053 30.0 10.6 86 44-130 199-285 (576)
226 COG0031 CysK Cysteine synthase 38.5 3.7E+02 0.008 25.9 12.7 60 65-125 56-116 (300)
227 PRK08162 acyl-CoA synthetase; 37.6 1.6E+02 0.0036 31.0 9.0 83 214-297 43-129 (545)
228 COG1064 AdhP Zn-dependent alco 37.2 2.7E+02 0.0058 27.4 9.2 60 62-125 159-218 (339)
229 TIGR01136 cysKM cysteine synth 37.0 3.8E+02 0.0082 25.7 10.6 89 35-126 22-113 (299)
230 PRK10696 tRNA 2-thiocytidine b 36.9 3.1E+02 0.0067 25.7 9.7 78 48-125 5-95 (258)
231 PRK08279 long-chain-acyl-CoA s 36.9 2.2E+02 0.0048 30.5 9.9 83 214-297 62-148 (600)
232 COG0318 CaiC Acyl-CoA syntheta 36.8 3.1E+02 0.0066 29.0 10.8 78 214-292 38-119 (534)
233 PLN00011 cysteine synthase 36.6 2.4E+02 0.0052 27.5 9.2 90 36-126 33-124 (323)
234 PRK08751 putative long-chain f 36.3 1.9E+02 0.0041 30.7 9.2 82 214-296 50-136 (560)
235 PRK09088 acyl-CoA synthetase; 35.5 3.5E+02 0.0075 28.0 10.9 77 214-291 22-102 (488)
236 TIGR02370 pyl_corrinoid methyl 35.2 3.3E+02 0.0071 24.3 12.4 99 41-139 47-160 (197)
237 PRK07787 acyl-CoA synthetase; 34.9 3.5E+02 0.0076 27.8 10.8 82 44-130 146-229 (471)
238 PRK07476 eutB threonine dehydr 34.7 2.8E+02 0.0061 27.0 9.3 57 78-134 74-130 (322)
239 PF00818 Ice_nucleation: Ice n 34.5 19 0.00042 17.3 0.5 9 340-348 1-9 (16)
240 cd02070 corrinoid_protein_B12- 34.2 3.4E+02 0.0074 24.2 11.3 89 237-328 84-181 (201)
241 PRK10946 entE enterobactin syn 34.1 2.9E+02 0.0062 29.1 10.1 84 44-131 200-286 (536)
242 PF01276 OKR_DC_1: Orn/Lys/Arg 34.0 1.8E+02 0.0038 29.6 7.8 81 67-157 103-205 (417)
243 COG1171 IlvA Threonine dehydra 33.9 4.5E+02 0.0098 25.9 10.2 114 21-138 26-141 (347)
244 PF06258 Mito_fiss_Elm1: Mitoc 33.8 4.5E+02 0.0098 25.5 11.0 98 34-136 146-247 (311)
245 PRK07786 long-chain-fatty-acid 33.8 3.4E+02 0.0073 28.6 10.6 83 214-297 42-128 (542)
246 PRK08276 long-chain-fatty-acid 33.7 2.7E+02 0.0058 29.0 9.8 83 214-297 11-97 (502)
247 PRK13391 acyl-CoA synthetase; 33.6 4.3E+02 0.0093 27.5 11.3 95 194-296 11-109 (511)
248 PRK08633 2-acyl-glycerophospho 33.4 3E+02 0.0066 32.3 11.1 95 33-130 780-885 (1146)
249 TIGR01139 cysK cysteine syntha 33.4 4.4E+02 0.0095 25.3 11.4 92 35-127 21-113 (298)
250 KOG0025 Zn2+-binding dehydroge 33.2 1.4E+02 0.003 28.5 6.2 64 66-129 157-221 (354)
251 PLN02574 4-coumarate--CoA liga 33.0 2.6E+02 0.0056 29.7 9.6 84 214-298 66-154 (560)
252 PRK06178 acyl-CoA synthetase; 32.9 2.7E+02 0.0058 29.6 9.7 84 214-298 58-145 (567)
253 PRK07059 Long-chain-fatty-acid 32.8 2.5E+02 0.0054 29.7 9.5 83 213-296 47-133 (557)
254 PRK07470 acyl-CoA synthetase; 32.7 3.9E+02 0.0084 28.0 10.8 98 33-131 161-268 (528)
255 PRK13382 acyl-CoA synthetase; 32.4 2.9E+02 0.0063 29.1 9.8 81 214-295 68-152 (537)
256 COG1022 FAA1 Long-chain acyl-C 32.4 4.3E+02 0.0093 28.5 10.6 102 30-135 186-297 (613)
257 TIGR03588 PseC UDP-4-keto-6-de 32.3 2.2E+02 0.0047 28.5 8.4 66 56-124 55-128 (380)
258 PTZ00297 pantothenate kinase; 32.3 4.3E+02 0.0093 32.0 11.6 97 213-319 456-556 (1452)
259 PLN02479 acetate-CoA ligase 32.2 3E+02 0.0065 29.2 10.0 81 214-295 45-129 (567)
260 PRK12406 long-chain-fatty-acid 32.2 2.5E+02 0.0054 29.2 9.3 84 214-298 11-98 (509)
261 PRK11658 UDP-4-amino-4-deoxy-L 31.8 2E+02 0.0044 28.7 8.1 62 57-122 60-126 (379)
262 PRK05677 long-chain-fatty-acid 31.7 2.4E+02 0.0052 29.9 9.1 82 213-295 48-134 (562)
263 cd01561 CBS_like CBS_like: Thi 31.5 4.7E+02 0.01 25.0 10.8 90 35-127 17-109 (291)
264 PRK05852 acyl-CoA synthetase; 31.3 3.4E+02 0.0074 28.5 10.2 86 44-132 194-282 (534)
265 TIGR02275 DHB_AMP_lig 2,3-dihy 31.3 3.9E+02 0.0084 28.0 10.5 94 33-130 181-286 (527)
266 COG2236 Predicted phosphoribos 30.8 80 0.0017 28.0 4.3 34 44-77 5-38 (192)
267 PRK06087 short chain acyl-CoA 30.6 2.3E+02 0.0051 29.8 8.8 77 213-290 48-128 (547)
268 TIGR01734 D-ala-DACP-lig D-ala 30.5 4.1E+02 0.0089 27.5 10.5 83 44-129 159-244 (502)
269 PRK12476 putative fatty-acid-- 30.5 7.1E+02 0.015 26.8 12.5 84 213-297 67-156 (612)
270 PRK06382 threonine dehydratase 30.5 3.1E+02 0.0068 27.8 9.1 92 34-130 39-132 (406)
271 PRK10717 cysteine synthase A; 30.4 3.5E+02 0.0075 26.5 9.2 89 35-126 28-119 (330)
272 cd01519 RHOD_HSP67B2 Member of 30.2 1.4E+02 0.0029 23.1 5.3 53 44-96 36-92 (106)
273 COG1167 ARO8 Transcriptional r 30.1 6.4E+02 0.014 26.1 14.4 59 67-126 176-235 (459)
274 COG1021 EntE Peptide arylation 30.1 2.8E+02 0.0061 27.9 8.0 107 215-327 54-169 (542)
275 cd00754 MoaD Ubiquitin domain 30.1 1.4E+02 0.0029 21.8 4.9 45 19-78 25-76 (80)
276 TIGR03443 alpha_am_amid L-amin 29.9 3.3E+02 0.0072 32.9 10.7 97 193-290 249-349 (1389)
277 cd02070 corrinoid_protein_B12- 29.8 4.1E+02 0.0088 23.7 12.4 99 41-139 46-158 (201)
278 PRK08008 caiC putative crotono 29.8 2.9E+02 0.0063 28.8 9.3 82 214-296 37-122 (517)
279 COG2879 Uncharacterized small 29.7 70 0.0015 22.2 2.8 27 24-57 27-53 (65)
280 TIGR03208 cyc_hxne_CoA_lg cycl 29.7 4.5E+02 0.0098 27.6 10.8 79 213-292 52-134 (538)
281 PRK12582 acyl-CoA synthetase; 28.9 2.6E+02 0.0057 30.2 8.9 78 213-291 79-165 (624)
282 TIGR03595 Obg_CgtA_exten Obg f 28.3 60 0.0013 23.2 2.5 19 58-76 45-63 (69)
283 KOG1138 Predicted cleavage and 28.2 1E+02 0.0022 31.5 4.8 70 59-128 407-477 (653)
284 TIGR02372 4_coum_CoA_lig 4-cou 28.2 6.2E+02 0.014 25.4 13.1 108 17-130 77-197 (386)
285 PRK10252 entF enterobactin syn 27.8 4.1E+02 0.0089 31.8 11.0 96 33-131 596-703 (1296)
286 cd02069 methionine_synthase_B1 27.7 4.6E+02 0.01 23.7 12.2 99 41-139 50-164 (213)
287 PRK06060 acyl-CoA synthetase; 26.9 3.5E+02 0.0077 29.7 9.6 81 214-295 30-114 (705)
288 PRK11493 sseA 3-mercaptopyruva 26.5 1E+02 0.0022 29.4 4.6 53 44-96 200-257 (281)
289 PRK15400 lysine decarboxylase 26.5 1.5E+02 0.0033 32.4 6.2 63 67-132 232-313 (714)
290 PRK15407 lipopolysaccharide bi 26.4 2.8E+02 0.0061 28.5 8.1 55 66-124 107-166 (438)
291 TIGR01137 cysta_beta cystathio 26.3 3.9E+02 0.0084 27.5 9.2 89 35-126 26-117 (454)
292 TIGR01138 cysM cysteine syntha 26.3 5.8E+02 0.013 24.4 11.5 90 35-126 23-114 (290)
293 cd01449 TST_Repeat_2 Thiosulfa 26.1 1.4E+02 0.0031 23.6 4.8 41 56-96 64-104 (118)
294 PRK12492 long-chain-fatty-acid 25.9 2.9E+02 0.0063 29.3 8.5 80 213-293 48-132 (562)
295 PRK06702 O-acetylhomoserine am 25.8 6E+02 0.013 26.1 10.1 32 91-123 122-153 (432)
296 PF09269 DUF1967: Domain of un 25.6 68 0.0015 23.0 2.4 23 53-75 40-62 (69)
297 PTZ00216 acyl-CoA synthetase; 25.6 4.2E+02 0.0091 29.2 9.8 86 211-298 118-208 (700)
298 PRK07867 acyl-CoA synthetase; 25.5 4.9E+02 0.011 27.3 10.1 83 214-297 28-115 (529)
299 cd02067 B12-binding B12 bindin 25.5 3.5E+02 0.0075 21.5 7.6 56 84-139 17-75 (119)
300 PRK06814 acylglycerophosphoeth 25.3 5.7E+02 0.012 30.1 11.4 94 33-129 791-895 (1140)
301 TIGR00936 ahcY adenosylhomocys 25.2 7.3E+02 0.016 25.2 11.3 59 69-127 31-91 (406)
302 PF06564 YhjQ: YhjQ protein; 25.1 2.6E+02 0.0056 26.0 6.7 80 25-105 67-152 (243)
303 PLN02356 phosphateglycerate ki 25.0 4.5E+02 0.0098 26.8 8.9 64 61-125 94-158 (423)
304 PRK07008 long-chain-fatty-acid 24.9 2E+02 0.0044 30.3 7.0 86 44-131 194-281 (539)
305 cd01563 Thr-synth_1 Threonine 24.8 3.3E+02 0.0072 26.4 8.0 91 35-131 38-130 (324)
306 PRK08526 threonine dehydratase 24.7 3.2E+02 0.007 27.7 8.0 98 34-136 34-133 (403)
307 PRK13390 acyl-CoA synthetase; 24.6 7.3E+02 0.016 25.7 11.1 78 214-292 24-105 (501)
308 TIGR02035 D_Ser_am_lyase D-ser 24.4 4.9E+02 0.011 26.7 9.2 62 75-136 156-217 (431)
309 KOG1175 Acyl-CoA synthetase [L 24.1 5.2E+02 0.011 27.9 9.5 96 194-293 79-178 (626)
310 KOG0257 Kynurenine aminotransf 24.0 5E+02 0.011 26.2 8.6 92 23-114 46-137 (420)
311 PRK06018 putative acyl-CoA syn 23.9 3.6E+02 0.0078 28.4 8.7 84 213-297 38-125 (542)
312 PRK06710 long-chain-fatty-acid 23.6 3.4E+02 0.0073 28.8 8.5 81 214-295 49-133 (563)
313 TIGR01127 ilvA_1Cterm threonin 23.6 5.6E+02 0.012 25.6 9.5 94 33-131 13-108 (380)
314 cd01562 Thr-dehyd Threonine de 23.2 4.7E+02 0.01 25.1 8.6 59 71-130 66-124 (304)
315 cd01019 ZnuA Zinc binding prot 23.1 4.9E+02 0.011 24.8 8.5 87 48-134 156-245 (286)
316 COG0379 NadA Quinolinate synth 23.0 2.8E+02 0.006 26.7 6.4 103 19-133 107-225 (324)
317 cd02067 B12-binding B12 bindin 22.9 1.9E+02 0.0041 23.0 5.0 46 246-291 11-58 (119)
318 PRK05851 long-chain-fatty-acid 22.6 6.1E+02 0.013 26.5 10.1 88 33-123 150-251 (525)
319 PRK07768 long-chain-fatty-acid 22.6 7.1E+02 0.015 26.1 10.7 92 33-127 150-256 (545)
320 cd07050 BMC_EutL_repeat2 ethan 22.5 1.4E+02 0.003 22.0 3.4 40 59-98 3-43 (87)
321 TIGR02544 III_secr_YscJ type I 21.9 5.7E+02 0.012 22.7 8.1 76 463-542 107-189 (193)
322 PRK05939 hypothetical protein; 21.8 3.6E+02 0.0078 27.3 7.7 37 89-125 81-118 (397)
323 PRK06721 threonine synthase; R 21.7 4.6E+02 0.01 25.9 8.3 88 36-129 44-134 (352)
324 PRK09192 acyl-CoA synthetase; 21.7 6.5E+02 0.014 26.8 10.2 85 213-298 48-143 (579)
325 PRK08180 feruloyl-CoA synthase 21.6 4.2E+02 0.009 28.6 8.7 78 213-291 68-154 (614)
326 PF00291 PALP: Pyridoxal-phosp 21.6 6.1E+02 0.013 24.1 9.2 56 70-126 56-111 (306)
327 PF09153 DUF1938: Domain of un 21.5 2.4E+02 0.0053 20.9 4.4 40 37-80 16-62 (86)
328 cd02071 MM_CoA_mut_B12_BD meth 21.3 4.4E+02 0.0095 21.2 8.5 56 84-139 17-75 (122)
329 PRK12483 threonine dehydratase 21.1 6.4E+02 0.014 26.6 9.4 97 35-136 52-150 (521)
330 PRK08813 threonine dehydratase 21.1 8.2E+02 0.018 24.2 10.3 57 75-131 85-141 (349)
331 cd06447 D-Ser-dehyd D-Serine d 21.0 5.1E+02 0.011 26.3 8.4 61 74-134 137-197 (404)
332 PRK08574 cystathionine gamma-s 21.0 4.1E+02 0.0089 26.7 7.9 9 47-55 54-62 (385)
333 PRK10595 SOS cell division inh 20.9 3.9E+02 0.0085 23.1 6.4 15 109-123 98-112 (164)
334 PRK08974 long-chain-fatty-acid 20.9 4.1E+02 0.0088 28.1 8.4 80 214-294 48-132 (560)
335 TIGR03205 pimA dicarboxylate-- 20.8 4.8E+02 0.01 27.4 8.9 77 214-291 46-126 (541)
336 PF02073 Peptidase_M29: Thermo 20.8 2E+02 0.0042 29.1 5.5 51 51-101 3-57 (398)
337 PF01037 AsnC_trans_reg: AsnC 20.8 2.9E+02 0.0062 19.4 5.1 24 463-486 10-33 (74)
338 PRK15399 lysine decarboxylase 20.5 2.3E+02 0.0051 31.0 6.2 63 67-132 232-313 (713)
339 PRK05638 threonine synthase; V 20.4 3.9E+02 0.0085 27.5 7.7 91 36-132 81-173 (442)
340 PLN02409 serine--glyoxylate am 20.4 6.6E+02 0.014 25.3 9.4 74 51-125 40-115 (401)
341 TIGR01124 ilvA_2Cterm threonin 20.3 7.7E+02 0.017 25.9 9.8 93 33-130 30-124 (499)
342 TIGR02080 O_succ_thio_ly O-suc 20.3 4.5E+02 0.0099 26.3 8.0 17 89-105 85-101 (382)
343 PRK11070 ssDNA exonuclease Rec 20.3 1E+03 0.022 25.5 10.8 102 44-158 48-161 (575)
344 PRK08638 threonine dehydratase 20.2 7.6E+02 0.017 24.2 9.4 58 77-134 81-138 (333)
345 COG5012 Predicted cobalamin bi 20.2 3.9E+02 0.0084 24.4 6.5 82 246-330 116-205 (227)
346 PRK07769 long-chain-fatty-acid 20.2 1.1E+03 0.024 25.4 12.7 83 213-296 54-142 (631)
347 PRK06110 hypothetical protein; 20.1 6.6E+02 0.014 24.4 9.0 62 75-136 74-135 (322)
No 1
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=3.4e-80 Score=622.88 Aligned_cols=519 Identities=38% Similarity=0.587 Sum_probs=443.3
Q ss_pred ccccccccccccCHHHHHHHhhhhCCCc-eeeeeCC---eeeeHHHHHHHHHHHHHHHHhcC--CCCCCEEEEEcCCchh
Q 008342 9 DLPKISANYTALTPLWFINRAATLHPTR-KSVVYGS---KHYTWHQTYRRCRRFASALSKLS--IGLGTTVSVIAPNVPA 82 (569)
Q Consensus 9 ~~~~~~~~~~~~~l~~~l~~~a~~~p~~-~a~~~~~---~~~Ty~el~~~~~~la~~L~~~g--~~~g~~V~i~~~~~~~ 82 (569)
.+........+.+....+.+.+..++++ +.+++.. +.+||+|+.+++.++|..|.++| +++||+|++.+||+++
T Consensus 5 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~ 84 (537)
T KOG1176|consen 5 KLWKGPANNTPLTPITFLGRPAFVYLDRNTSLVYQDSDGRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPE 84 (537)
T ss_pred ccccCcccCccccccccccccccccccCcceEEEecCCCcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHH
Confidence 3333344555556566666666666666 7777765 99999999999999999999876 8999999999999999
Q ss_pred HHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchh
Q 008342 83 MYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSK 162 (569)
Q Consensus 83 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 162 (569)
++.++|||+.+|+++.++||.+.+.++.+.++.++++++|++.+....+.++...+. ..++.+........
T Consensus 85 ~~~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~---------~~i~~l~~~~~~~~ 155 (537)
T KOG1176|consen 85 FVELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLA---------LKIIVLTGDEGVIS 155 (537)
T ss_pred HHHHHHHHHHcCccccccCcccCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcC---------CceEEEecccCccc
Confidence 999999999999999999999999999999999999999999999888877655432 44444444311000
Q ss_pred hhHHhhhcchhh-HHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEE
Q 008342 163 QLEYALARGAIE-YEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLW 241 (569)
Q Consensus 163 ~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~ 241 (569)
. ........ +..+.....+.. ..+...+|+++++|||||||.||||.+||++++.........+.+...|+.++
T Consensus 156 -~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~~~v~l~ 230 (537)
T KOG1176|consen 156 -I--SDLVEDLDAFEDLMPEGLPDG--IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTSDDVYLC 230 (537)
T ss_pred -c--ccccccccchhhccccCCCcc--cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCCCceEEE
Confidence 0 00001111 445544444433 45567899999999999999999999999999999887777788888999999
Q ss_pred cCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCC
Q 008342 242 TLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGA 320 (569)
Q Consensus 242 ~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~ 320 (569)
.+|++|.+|+...+.+.+.+++.++. ..+++..+++.|++|++|++.++|.++..|++.+.....+ +++++.+.+||+
T Consensus 231 ~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~-l~sl~~v~~gga 309 (537)
T KOG1176|consen 231 TLPLFHIYGLITLLLSLLAGGTTIICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYD-LSSLRSVLSGGA 309 (537)
T ss_pred echHHHHhHHHHHHHHHHhCCceEEECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCccCccc-CCccEEEEecCC
Confidence 99999999999999977777766666 5679999999999999999999999999999998555555 999999999999
Q ss_pred CCCHHHHHHhhhc-C-CeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCC
Q 008342 321 PPPPSLLFAMSQK-G-FRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPAD 398 (569)
Q Consensus 321 ~l~~~~~~~~~~~-~-~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~ 398 (569)
+++++..+++.+. + ..+.+.||+||+++.++.+...+. ...+++|.+++++ ..++++++|+.++.+
T Consensus 310 ~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e----------~k~~svG~~~~g~--~~~v~~e~g~~l~~~ 377 (537)
T KOG1176|consen 310 PLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGPE----------RKPGSVGRLLPGV--RVKVLDETGVSLGPN 377 (537)
T ss_pred CCCHHHHHHHHHhCCCceEEEeeccccccCceeecCCCcc----------CcccccCccccce--EEEeeCCCCCCCCCC
Confidence 9999999999854 6 899999999999988888764332 4569999999966 455555679999988
Q ss_pred CCceEEEEEecCcccccccCCcchhhhhhcC-CeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCC
Q 008342 399 GKTIGEIVMRGSCVMKGYLKNPKANEEAFAN-GWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPL 477 (569)
Q Consensus 399 ~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~ 477 (569)
+.||||++|+.++.||+++|+.|.+.|.+ ||++|||+|++|+||+++|.+|++|+||.+|++|+|.|||++|..||.
T Consensus 378 --~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~DG~l~IvdR~KdlIk~~G~qv~P~EiE~vL~~hP~ 455 (537)
T KOG1176|consen 378 --QTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDEDGYLYIVDRSKDLIKYGGEQVSPAEIEAVLLTHPD 455 (537)
T ss_pred --CceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEcCCCeEEEecchhhheeeCCEEeCHHHHHHHHHhCCC
Confidence 78999999999999999999999999977 999999999999999999999999999999999999999999999999
Q ss_pred ceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHH
Q 008342 478 VLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKA 556 (569)
Q Consensus 478 v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~ 556 (569)
|.||+|++.+++.+|+.+.|+|+.+++... .+++|.++|+++++.|++|..+.|++ ||+|++|||+|+.|++.+
T Consensus 456 V~eaaVvgipDe~~Ge~p~A~VV~k~g~~l-----te~di~~~v~k~l~~y~~~~~V~Fvd~lPKs~~GKi~R~~lr~~~ 530 (537)
T KOG1176|consen 456 VLEAAVVGIPDEVWGETPAAFVVLKKGSTL-----TEKDIIEYVRKKLPAYKLPGGVVFVDELPKTPNGKILRRKLRDIA 530 (537)
T ss_pred ccEEEEEcccccccCCcceEEEEecCCCcC-----CHHHHHHHHHhhCChhhccCeEEEeccCCCCCcchHHHHHHHHHH
Confidence 999999999999999999999999986655 78999999999999999999999987 999999999999999999
Q ss_pred HhcCC
Q 008342 557 KEMGP 561 (569)
Q Consensus 557 ~~~~~ 561 (569)
.+...
T Consensus 531 ~~~~~ 535 (537)
T KOG1176|consen 531 KKLGS 535 (537)
T ss_pred Hhccc
Confidence 88654
No 2
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=2.4e-76 Score=591.42 Aligned_cols=491 Identities=27% Similarity=0.383 Sum_probs=417.7
Q ss_pred HHHHhhh-hCCCceeeeeCC-----eeeeHHHHHHHHHHHHHHHHh-cCCCCCCEEEEEcCCchhHHHHHHHhhhcCceE
Q 008342 25 FINRAAT-LHPTRKSVVYGS-----KHYTWHQTYRRCRRFASALSK-LSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVL 97 (569)
Q Consensus 25 ~l~~~a~-~~p~~~a~~~~~-----~~~Ty~el~~~~~~la~~L~~-~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 97 (569)
.++++.+ ..+++.|+++.+ +++||+||.+.++++|+.|++ .|+ +||||+|++|+.+++++++|||+++|++.
T Consensus 14 ~~dr~~~~~~~~~~aii~~~e~~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA~~riGAI~ 92 (528)
T COG0365 14 ALDRHLEADRPDDTAIIFDGEDGLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLATARIGAIP 92 (528)
T ss_pred hhhhhhhccCCCceEEEEEcCCCCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHHHHHcCCEE
Confidence 5777765 357899999874 689999999999999999987 668 99999999999999999999999999999
Q ss_pred eeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHH--HHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhH
Q 008342 98 NSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEA--LKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEY 175 (569)
Q Consensus 98 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 175 (569)
+|+.+.++++.+..++++++++++|+.+......+.. ...... ....++++.... ..|
T Consensus 93 ~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~------~~~~~iv~~r~~--------------~~~ 152 (528)
T COG0365 93 AVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADA------VLSSVVVVPRLG--------------LWY 152 (528)
T ss_pred eecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHH------hhcceEEecccc--------------ccH
Confidence 9999999999999999999999999988754433221 010000 000033333321 677
Q ss_pred HhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhH-hHhCCCCCcEEEEcCCccchhhHHHH
Q 008342 176 EKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGA-LIWGMNEGAVFLWTLPMFHGNGWSYT 254 (569)
Q Consensus 176 ~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~-~~~~~~~~d~~~~~~p~~~~~g~~~~ 254 (569)
.+++......+.... ...+|+++|+|||||||+||+|+++|.+++....... ..+.+.++|++.+..++.|++|.++.
T Consensus 153 ~~~~~~~~~~~~~~~-~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~~ad~GW~~g~~~~ 231 (528)
T COG0365 153 DEAVEKASEKFEFEP-LPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWNSSDPGWIYGLWYS 231 (528)
T ss_pred HHHhhccCCCCCccc-cCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEeCCCchhhhCchHH
Confidence 777777665554433 7889999999999999999999999998766665544 46788899999999999999999886
Q ss_pred HHHH-HhcceEEEecc--C-ChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHh
Q 008342 255 WSLA-ALCGTSICLRQ--V-TAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAM 330 (569)
Q Consensus 255 ~~~~-~~g~~~~~~~~--~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~ 330 (569)
+..+ +.|++++++.. + +++.++++|+++++|++++.|+.++.|.+.......+ +++||.+.+.|||++++..+++
T Consensus 232 v~~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~~d-lssLr~~~SaGEPLnpe~~~w~ 310 (528)
T COG0365 232 VFSPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEPYD-LSSLRVLGSAGEPLNPEAFEWF 310 (528)
T ss_pred HHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCccccc-chhheeeeccCCCCCHHHHHHH
Confidence 5555 45666666632 3 3899999999999999999999999999987633444 9999999999999999999999
Q ss_pred hhc-CCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEec
Q 008342 331 SQK-GFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRG 409 (569)
Q Consensus 331 ~~~-~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~ 409 (569)
.+. |++|.+.||+||+|++.....+ ...+++.|.|.|+. +++++|++ |++++.+ + |+|+++.
T Consensus 311 ~~~~g~~i~d~~gqTEtg~~~~~~~~------------~~~~g~~g~p~pG~-~~~vvdd~-g~~~~~~--~-G~Lvi~~ 373 (528)
T COG0365 311 YSALGVWILDIYGQTETGMGFIAGRP------------PVKNGSSGLPLPGY-AVRRVDDE-GNPVPPG--V-GELVVRL 373 (528)
T ss_pred HHHhCCCEeccccccccCccccCCCC------------CcCCCCCCCCCCCc-eeEEECCC-CCcCCCC--c-eEEEEeC
Confidence 955 9999999999999955544321 22336669999999 69999999 9999988 6 9999998
Q ss_pred C--cccccccCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeec
Q 008342 410 S--CVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARP 487 (569)
Q Consensus 410 ~--~~~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~ 487 (569)
+ .++++||++++...+.+...||.|||.+.+|+||+++|+||.||+|++.|.++.+.|||++|.+||.|.||+|++.+
T Consensus 374 ~~p~~~~~~w~d~er~~~~y~~~~y~tGD~~~~DedGy~~i~GR~DDvI~vsG~Rig~~EvE~~l~~hP~VaEaAvVg~p 453 (528)
T COG0365 374 PWPGMALTYWNDPERYKEAYFGRWYRTGDWAERDEDGYFWLHGRSDDVIKVSGKRIGPLEIESVLLAHPAVAEAAVVGVP 453 (528)
T ss_pred CCchhhhhhhCCHHHHHHHHhhceeecCceeEEccCCCEEEEeeccceEeccCeeccHHHHHHHHHhCcceeeeEEEecc
Confidence 7 88999999999998888777999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHh
Q 008342 488 DERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKE 558 (569)
Q Consensus 488 ~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~ 558 (569)
++..|+.+.+||+++++.... ++.++|++++++.+.++..|..+.|++ ||||.+|||.|+.||+.+.+
T Consensus 454 d~~kg~~v~afVvL~~g~~~~---~L~~ei~~~vr~~~~~~~~p~~i~fv~~LPkT~sGKI~R~~lr~~~~~ 522 (528)
T COG0365 454 DPGKGQIVLAFVVLAAGVEPN---ELAEEIRRHVARNIGPHAIPRKIRFVDELPKTASGKIQRRLLRKILHK 522 (528)
T ss_pred CCCCCcEEEEEEEecCCCChH---HHHHHHHHHHHhccCcccCCceEEEecCCCCCCcccHHHHHHHHHHhh
Confidence 999999999999999987442 589999999988888899999999887 99999999999999999885
No 3
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=9.9e-77 Score=555.12 Aligned_cols=522 Identities=26% Similarity=0.364 Sum_probs=451.4
Q ss_pred ccccccCHHHHHHHhhhhCCCceeeeeC--CeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhh
Q 008342 15 ANYTALTPLWFINRAATLHPTRKSVVYG--SKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPM 92 (569)
Q Consensus 15 ~~~~~~~l~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 92 (569)
.+....|++++++..+++-||+.|+++. +.++||+|+.+.+.++|++|..+|+++||||++..||+.+|+..+|||.+
T Consensus 45 ipl~~~Tigq~l~~~t~~v~dkea~Vf~~eg~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~ 124 (596)
T KOG1177|consen 45 IPLDSETIGQLLETTTERVPDKEAAVFDHEGIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACAR 124 (596)
T ss_pred CCcccccHHHHHHHHhhccCcceEEEEeeccchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHHH
Confidence 3455779999999999999999998875 46799999999999999999999999999999999999999999999999
Q ss_pred cCceEeeccccCCHHHHHHHHhcCCceEEEEcccc-----hHHHHHHHHHHhhhcCCCC------CcCeEEEecCCCcch
Q 008342 93 AGAVLNSINIRLNATVVAFILSHASSAVVIVDQEF-----FSLAEEALKMMEANSEGKL------KTPHLIVIGDESCDS 161 (569)
Q Consensus 93 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~~~~~~~~~------~~~~~i~~~~~~~~~ 161 (569)
+|.+.+++||.+...+++..|+..+++++|+.+.+ ...+.+.+.++.+...+.+ +..+++..++..
T Consensus 125 AG~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed~--- 201 (596)
T KOG1177|consen 125 AGLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADEDH--- 201 (596)
T ss_pred hceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCCC---
Confidence 99999999999999999999999999999997653 4556666666654433332 345566666332
Q ss_pred hhhHHhhhcchhhHHhhhhcCCCCCC----C-CCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCC
Q 008342 162 KQLEYALARGAIEYEKFLETGDPEFA----W-KPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEG 236 (569)
Q Consensus 162 ~~~~~~~~~~~~~~~~~l~~~~~~~~----~-~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~ 236 (569)
...+...+++++........ + ....++++++.|.|||||||.||++.+||.++++++......+++.+.
T Consensus 202 ------~~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g~~e~ 275 (596)
T KOG1177|consen 202 ------PLPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAGYNEK 275 (596)
T ss_pred ------cCCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhCcCcc
Confidence 34566777777766554321 1 122577999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCccchhhHHHHHHH-HHhcceEEEe-ccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCccccee
Q 008342 237 AVFLWTLPMFHGNGWSYTWSL-AALCGTSICL-RQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVN 314 (569)
Q Consensus 237 d~~~~~~p~~~~~g~~~~~~~-~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~ 314 (569)
+++++..|++|.+|.....++ +..|.+++++ +.|++...+++|+++++|.++++|.+|..|++.+.....+ ++++|.
T Consensus 276 ~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~-~s~lr~ 354 (596)
T KOG1177|consen 276 HRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVD-LSSLRK 354 (596)
T ss_pred eEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCc-hhhhhh
Confidence 999999999999996555554 4556666664 5699999999999999999999999999999999888888 999999
Q ss_pred eeecCCCCCHHHHHHhhh-cCC-eEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCC
Q 008342 315 VNTAGAPPPPSLLFAMSQ-KGF-RITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTN 392 (569)
Q Consensus 315 ~~~~g~~l~~~~~~~~~~-~~~-~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~ 392 (569)
.+.||+++++++.+.+.. .++ .+...||+||+++..+....+ ....+...++|+.+++. +..++|.+ |
T Consensus 355 ~vigGa~~s~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~--------D~~~~~~ksVG~~m~h~-Ea~iv~~~-g 424 (596)
T KOG1177|consen 355 GVIGGAPVSPELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLG--------DPPEERIKSVGHLMDHY-EAAIVDKD-G 424 (596)
T ss_pred heeCCCCCCHHHHHHHHHhhCceeeEEEeeccccCcceeeecCC--------CCHHHHHhhhhhccccc-ccccccCC-C
Confidence 999999999999999874 344 477889999999887775543 33445558899999999 69999955 9
Q ss_pred cccCCCCCceEEEEEecCcccccccCCcchhhhhh-cCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHH
Q 008342 393 QPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAF-ANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKV 471 (569)
Q Consensus 393 ~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~ 471 (569)
..+|.+ +.|||+++|.+.|.|||++++.+.+.. .+.||+|||++.+|++|.+++.||++|+|+.+|++|+|.|||+.
T Consensus 425 ~~v~~~--~~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~ElE~f 502 (596)
T KOG1177|consen 425 SEVPLG--TKGELLIRGYSTMLGYWGEEEKTKETIGNDRWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPTELEDF 502 (596)
T ss_pred CccccC--CCceEEEEechhheeecCCcccchhhcccccceecCceEEEcCCCcEEEEEcccCeEEeCCcccChHHHHHH
Confidence 999999 679999999999999999888877766 57799999999999999999999999999999999999999999
Q ss_pred HhcCCCceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHH
Q 008342 472 LYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKH 550 (569)
Q Consensus 472 l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~ 550 (569)
|-+||.|.++.|+++++...|+.++|++.+..+.... .+.++|.++|+.++..|++|+.+.+++ +|+|.+|||+|-
T Consensus 503 L~~hp~V~~a~VVGV~D~R~GE~VCA~vRLqe~~e~~---~t~E~lKa~Ck~klaHFKiPky~vf~~~FPlT~tGKIqKF 579 (596)
T KOG1177|consen 503 LNKHPLVKEAHVVGVPDERLGEEVCACVRLQEGAEGK---TTAETLKAMCKGKLAHFKIPKYFVFVDEFPLTTTGKIQKF 579 (596)
T ss_pred HhhCCCeeeEEEEccCCCcccceEEEEEEeecccccc---ccHHHHHHHHhcccccccCCcEEEEeccCcccccccchhH
Confidence 9999999999999999999999999999998876532 367899999999999999999999887 999999999999
Q ss_pred HHHHHHHhcCC
Q 008342 551 LLRAKAKEMGP 561 (569)
Q Consensus 551 ~l~~~~~~~~~ 561 (569)
+++++....-.
T Consensus 580 eir~~~k~~l~ 590 (596)
T KOG1177|consen 580 EIREMSKGHLG 590 (596)
T ss_pred HHHHHHHhhcc
Confidence 99999985543
No 4
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.9e-75 Score=609.78 Aligned_cols=509 Identities=35% Similarity=0.504 Sum_probs=433.2
Q ss_pred cccccCHHHHHHHhhhhCCCceeeeeCCee--eeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhc
Q 008342 16 NYTALTPLWFINRAATLHPTRKSVVYGSKH--YTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMA 93 (569)
Q Consensus 16 ~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~--~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~ 93 (569)
.+..+++.+++++++..+|+++|+.+.+.. +||+||.++++++|++|++.|+++||+|+|+++|++++++++|||+++
T Consensus 7 ~~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~~~~ 86 (534)
T COG0318 7 MTAELTLASLLERAARRNPDRPALIFLGRGGRLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAALRA 86 (534)
T ss_pred ccccccHHHHHHHHHHhCCCceEEEEcCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 456789999999999999999999998877 999999999999999999999999999999999999999999999999
Q ss_pred CceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchh
Q 008342 94 GAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAI 173 (569)
Q Consensus 94 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 173 (569)
|++++|++|.+...++.++++.+++++++++.+..+.........+ ....+........... .
T Consensus 87 Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~----------~ 149 (534)
T COG0318 87 GAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALP-------VVLVVLLVGDADDRLP----------I 149 (534)
T ss_pred CEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCC-------cceEEEeccccccccc----------c
Confidence 9999999999999999999999999999999884444443322211 1122222221111000 2
Q ss_pred hHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhC--CCCCcEEEEcCCccchhhH
Q 008342 174 EYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWG--MNEGAVFLWTLPMFHGNGW 251 (569)
Q Consensus 174 ~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~--~~~~d~~~~~~p~~~~~g~ 251 (569)
.++++...............++++++++|||||||.||+|++||+++..+.......++ +++.|++++.+|++|.+|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl 229 (534)
T COG0318 150 TLEALAAEGPGPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGL 229 (534)
T ss_pred cHHHHhhccCCcccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHH
Confidence 45555433333322222357889999999999999999999999999999888888888 8999999999999999999
Q ss_pred HHHHHHHHhcc-eEEEec--cCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCccc-ceeeeecCCCCCHHHH
Q 008342 252 SYTWSLAALCG-TSICLR--QVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTN-VVNVNTAGAPPPPSLL 327 (569)
Q Consensus 252 ~~~~~~~~~g~-~~~~~~--~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~-l~~~~~~g~~l~~~~~ 327 (569)
...+..++.+| +.++.. .+++..++..+.++++|++.++|.++..+++........ +.+ +|.++.||+++++++.
T Consensus 230 ~~~~~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~-~~~~lr~~~~gg~~~~~~~~ 308 (534)
T COG0318 230 IVGLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDD-LSSSLRLVLSGGAPLPPELL 308 (534)
T ss_pred HHHHHHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCccc-cccceEEEEecCCcCCHHHH
Confidence 98888855554 555555 499999999999999999999999999999887766554 454 9999999999999999
Q ss_pred HHhhhc-C-CeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEE
Q 008342 328 FAMSQK-G-FRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEI 405 (569)
Q Consensus 328 ~~~~~~-~-~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel 405 (569)
+++.+. + .++.+.||+||+++.++.+...+ . ....++.|.|.+++ +++|+|++++.+.| | ++|||
T Consensus 309 ~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~-~--------~~~~~~~G~~~pg~-~v~Ivd~~~~~~~p-g--~vGei 375 (534)
T COG0318 309 ERFEERFGPIAILEGYGLTETSPVVTINPPDD-L--------LAKPGSVGRPLPGV-EVRIVDPDGGEVLP-G--EVGEI 375 (534)
T ss_pred HHHHHHhCCCceEEeecccccCceeecCCCch-h--------hhcCCcccccCCCc-EEEEEeCCCCccCC-C--CceEE
Confidence 999944 5 57999999999997777654322 0 23446679999999 69999999776777 5 69999
Q ss_pred EEecCcccccccCCcchhhhhhcC-CeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEE
Q 008342 406 VMRGSCVMKGYLKNPKANEEAFAN-GWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVV 484 (569)
Q Consensus 406 ~v~~~~~~~gy~~~~~~~~~~~~~-g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~ 484 (569)
+++||+++.|||++++.+...|.+ |||+|||+|++|++|+++|.||.+|+|+.+|++|+|.+||+++.+||.|.+++|+
T Consensus 376 ~irgp~v~~GY~~~pe~t~~~f~~~gW~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~eiE~~l~~~~~V~~aavv 455 (534)
T COG0318 376 WVRGPNVMKGYWNRPEATAEAFDEDGWLRTGDLGYVDEDGYLYIVGRLKDLIISGGENIYPEEIEAVLAEHPAVAEAAVV 455 (534)
T ss_pred EEECchhhhhhcCChHHHHHhhccCCeeeecceEEEcCCccEEEEeccceEEEeCCeEECHHHHHHHHHhCCCcceEEEE
Confidence 999999999999999999998886 9999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHh
Q 008342 485 ARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKE 558 (569)
Q Consensus 485 ~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~ 558 (569)
+.+++.+|+.++++++..++.. .....++|.++|+.+++.|++|+.+.+++ ||+|++||++|+.|++.+.+
T Consensus 456 gvpd~~~Ge~~~a~v~~~~~~~---~~~~~~~i~~~~~~~l~~~~~P~~v~~v~~lP~t~sGKi~r~~lr~~~~~ 527 (534)
T COG0318 456 GVPDERWGERVVAVVVLKPGGD---AELTAEELRAFLRKRLALYKVPRIVVFVDELPRTASGKIDRRALREEYRA 527 (534)
T ss_pred eCCCCccCceEEEEEEEcCCCC---CCCCHHHHHHHHHhhhhcccCCeEEEEeCCCCCCCchhhhHHHHHHHHHh
Confidence 9999999999999999998743 01156899999999999999999999877 99999999999999999987
No 5
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.2e-73 Score=519.47 Aligned_cols=506 Identities=28% Similarity=0.409 Sum_probs=445.7
Q ss_pred cccccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCc
Q 008342 16 NYTALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGA 95 (569)
Q Consensus 16 ~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 95 (569)
=|.+.|+.++|.++|.++||++|+++.++++||+||++++.++|..|.++|+++||+|.+.+||..+|++++||++++|+
T Consensus 24 yW~d~~l~d~L~~~A~~~pdriAv~d~~~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FALlrlGv 103 (542)
T COG1021 24 YWQDRTLTDILTDHAARYPDRIAVIDGERRLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFALLRLGV 103 (542)
T ss_pred cccCCcHHHHHHHHHhhcCCceEEecCcccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHHHHHcCc
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeeccccCCHHHHHHHHhcCCceEEEEccc-----chHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhc
Q 008342 96 VLNSINIRLNATVVAFILSHASSAVVIVDQE-----FFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALAR 170 (569)
Q Consensus 96 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 170 (569)
.+|.-=|.....+|.++.+...++.+|++.. ......+.....+ ..+++++.++.+..
T Consensus 104 ~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~-------tlr~v~v~ge~~~~---------- 166 (542)
T COG1021 104 APVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHP-------TLRHVIVAGEAEHP---------- 166 (542)
T ss_pred chhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCC-------cceEEEEccCCCCc----------
Confidence 9998888888999999999999999998764 3344455554444 45777777554322
Q ss_pred chhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhh
Q 008342 171 GAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNG 250 (569)
Q Consensus 171 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g 250 (569)
......+........+..+..+++++++..+.||||.||.|+.||.....+..+..+.++++..++.++.+|..|.+.
T Consensus 167 --~~~~~~~~~~a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~~tvyL~~LP~AHNfp 244 (542)
T COG1021 167 --SVLEAALCHPAGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQQTVYLCALPAAHNFP 244 (542)
T ss_pred --chhhhhhhCccccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhCcCccceEEEecccccCCC
Confidence 122233333444444445678889999999999999999999999999999998999999999999999999999988
Q ss_pred HH--HHHHHHHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHH
Q 008342 251 WS--YTWSLAALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLF 328 (569)
Q Consensus 251 ~~--~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~ 328 (569)
+. ..+..++.||++++.+..+|+..+.+|+++++|+...+|.....+++..+....+ +++||.+-+||..++++..+
T Consensus 245 lssPG~LGv~~agG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~~~-LsSLrllQVGGarl~~~~Ar 323 (542)
T COG1021 245 LSSPGALGVFLAGGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWERAD-LSSLRLLQVGGARLSATLAR 323 (542)
T ss_pred CCCcchhheeeeccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcccCC-chheeEEeecCcccCHHHHh
Confidence 75 6677788899999999999999999999999999999999999999998887777 99999999999999999999
Q ss_pred Hhh-hcCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEE
Q 008342 329 AMS-QKGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVM 407 (569)
Q Consensus 329 ~~~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v 407 (569)
++. .+||.+-+.|||.|.-...+ ... .+.+....+.|+|+...|++.|+|.+ |++++.| ++|+|..
T Consensus 324 rv~~~lgC~LQQVFGMAEGLvnyT--RLD--------Dp~E~i~~TQGrPlsP~DEvrvvD~d-g~pv~pG--E~G~Llt 390 (542)
T COG1021 324 RVPAVLGCQLQQVFGMAEGLVNYT--RLD--------DPPEIIIHTQGRPLSPDDEVRVVDAD-GNPVAPG--EVGELLT 390 (542)
T ss_pred hchhhhCchHHHHhhhhhhhhccc--ccC--------CchHheeecCCCcCCCcceeEEecCC-CCCCCCC--Ccceeee
Confidence 998 55999999999999643222 221 22334457889999999999999998 9999999 8999999
Q ss_pred ecCcccccccCCcchhhhhh-cCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEee
Q 008342 408 RGSCVMKGYLKNPKANEEAF-ANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVAR 486 (569)
Q Consensus 408 ~~~~~~~gy~~~~~~~~~~~-~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~ 486 (569)
+||+..+|||+.++-+.+.| .+|+|+|||+++.++||++.+.||.+|+|+.+|+||..+|||+.|..||.|.++++++.
T Consensus 391 RGPYTirGYyrap~HNa~aF~a~GFYrsGD~V~~~~dGyl~V~GR~KDQINRgGEKIAAeEvEn~LL~HP~V~~AAlVam 470 (542)
T COG1021 391 RGPYTIRGYYRAPEHNARAFDADGFYRSGDLVRRDPDGYLVVEGRVKDQINRGGEKIAAEEVENLLLRHPAVHDAALVAM 470 (542)
T ss_pred cCCeeeeeeccCchhhhhccCcCCceecCceeEecCCceEEEEeeehhhhccccchhhHHHHHHHHhhCchhhhhhhhcC
Confidence 99999999999999999999 58999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhc-CCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHhcC
Q 008342 487 PDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAK-MPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKEMG 560 (569)
Q Consensus 487 ~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~-l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~ 560 (569)
++.-.||+.++||+.++..- ...+++.++++. +..|++|..+.+++ +|.|+-|||++|.|++.+....
T Consensus 471 pDelLGEksCAfiv~~~~~~------~~~qlr~~L~~~GlAa~K~PDrie~v~~~P~T~VGKIdKk~Lr~~l~~~~ 540 (542)
T COG1021 471 PDELLGEKSCAFIVVKEPPL------RAAQLRRFLRERGLAAFKLPDRIEFVDSLPLTAVGKIDKKALRRRLASRL 540 (542)
T ss_pred chhhcCcceeEEEEecCCCC------CHHHHHHHHHHcchhhhcCCcceeecccCCCcccccccHHHHHHHhhhhc
Confidence 99999999999999988753 457888888876 88999999999888 9999999999999998887543
No 6
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=5.1e-71 Score=586.07 Aligned_cols=546 Identities=48% Similarity=0.838 Sum_probs=433.6
Q ss_pred CCccccccccccccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHH
Q 008342 7 IDDLPKISANYTALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEA 86 (569)
Q Consensus 7 ~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~ 86 (569)
|+......+...+.|+.++|+++++.+|+++|+.+.+.++||+||.++++++|++|.++|+++||+|+|+++|+++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~Al~~~~~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~ 80 (579)
T PLN03102 1 MDNLALCEANNVPLTPITFLKRASECYPNRTSIIYGKTRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEM 80 (579)
T ss_pred CCCccCCccccccccHHHHHHHHHHhCCCCeEEEECCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHH
Confidence 34556666777788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHH
Q 008342 87 QFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEY 166 (569)
Q Consensus 87 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 166 (569)
+|||+++|++++|+++.++.+++.++++.++++++|++++....+.+....++.. +.. ....++.+++......
T Consensus 81 ~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~---- 154 (579)
T PLN03102 81 HFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSE-DSN-LNLPVIFIHEIDFPKR---- 154 (579)
T ss_pred HHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhcccc-ccc-cCceEEEecccccccC----
Confidence 9999999999999999999999999999999999999988766655544333210 000 1123444443211000
Q ss_pred hhhcchhhHHhhhhcCCCCCCC----CCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEc
Q 008342 167 ALARGAIEYEKFLETGDPEFAW----KPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWT 242 (569)
Q Consensus 167 ~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~ 242 (569)
......+|.+++......... .....++++++|+|||||||.||+|.++|.++..........+.+...+++++.
T Consensus 155 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~ 233 (579)
T PLN03102 155 -PSSEELDYECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGTCPVYLWT 233 (579)
T ss_pred -CcccccCHHHHHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcCCCCCCeEEec
Confidence 001234556555433221110 112356899999999999999999999999976555444445567778899999
Q ss_pred CCccchhhHHHHHHHHHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCC
Q 008342 243 LPMFHGNGWSYTWSLAALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPP 322 (569)
Q Consensus 243 ~p~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l 322 (569)
+|++|..|+...+.++..|+++++...+++.++++.|+++++|++.++|+++..|.+........ .++++.+++||+++
T Consensus 234 ~pl~h~~g~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~~~~~~~gg~~~ 312 (579)
T PLN03102 234 LPMFHCNGWTFTWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSP-RSGPVHVLTGGSPP 312 (579)
T ss_pred CChhhhcchhHHHHHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCC-cccceEEEECCCCC
Confidence 99999999887777788899998888888999999999999999999999999998865333222 56788899999999
Q ss_pred CHHHHHHhhhcCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCce
Q 008342 323 PPSLLFAMSQKGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTI 402 (569)
Q Consensus 323 ~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~ 402 (569)
++.+.+++++.|+++++.||+||+++.++.+.....+...+...........|.+......+++.+.+++++++.++++.
T Consensus 313 ~~~~~~~~~~~g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~i~~~~~~~~v~~~~~~~ 392 (579)
T PLN03102 313 PAALVKKVQRLGFQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLADVDVKNKETQESVPRDGKTM 392 (579)
T ss_pred CHHHHHHHHHcCCeEEeecCccccCccccccccccccccCCcccccccccCCCcccccccceEEeccccccccCCCCCCc
Confidence 99999998888999999999999987665443222221111111011112233333322257788877788887654468
Q ss_pred EEEEEecCcccccccCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeE
Q 008342 403 GEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAA 482 (569)
Q Consensus 403 Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~ 482 (569)
|||+++|+.++.||+++++.+...|.+|||+|||+|+++++|++++.||.+|+|+.+|.+|+|.+||.+|.+||.|.+++
T Consensus 393 GEl~v~g~~~~~GY~~~~~~t~~~f~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~a~ 472 (579)
T PLN03102 393 GEIVIKGSSIMKGYLKNPKATSEAFKHGWLNTGDVGVIHPDGHVEIKDRSKDIIISGGENISSVEVENVLYKYPKVLETA 472 (579)
T ss_pred eEEEEECcchhhhhcCChhhhHhhhccCceecCceEEEcCCCeEEEEeccCcEEEECCEEECHHHHHHHHHhCCCcceeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCCceeeEEEEecCCcchhh-----hhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHH
Q 008342 483 VVARPDERWGESPCAFVTLKPEADELD-----KGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKA 556 (569)
Q Consensus 483 v~~~~~~~~g~~~~~~v~~~~~~~~~~-----~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~ 556 (569)
|++.+++..++.+.++|++.++....+ ......+++++++++|+.|++|..+++.+ ||+|++||++|++|++++
T Consensus 473 vv~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i~~~~~~P~t~~gKi~r~~L~~~~ 552 (579)
T PLN03102 473 VVAMPHPTWGETPCAFVVLEKGETTKEDRVDKLVTRERDLIEYCRENLPHFMCPRKVVFLQELPKNGNGKILKPKLRDIA 552 (579)
T ss_pred EEeccCccccceeEEEEEecCcccccccccccccccHHHHHHHHHhhcccccCCeEEEEcccCCCCCcccccHHHHHHHH
Confidence 999999988999999998876543210 01135689999999999999999998777 999999999999999988
Q ss_pred HhcC
Q 008342 557 KEMG 560 (569)
Q Consensus 557 ~~~~ 560 (569)
.+..
T Consensus 553 ~~~~ 556 (579)
T PLN03102 553 KGLV 556 (579)
T ss_pred HHhh
Confidence 7643
No 7
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.9e-71 Score=591.94 Aligned_cols=518 Identities=19% Similarity=0.259 Sum_probs=409.9
Q ss_pred HHHHHHHhhhh--CCCceeeeeC------CeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhc
Q 008342 22 PLWFINRAATL--HPTRKSVVYG------SKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMA 93 (569)
Q Consensus 22 l~~~l~~~a~~--~p~~~a~~~~------~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~ 93 (569)
..++++++++. +|+++|+++. .+++||+||.+++.++|+.|.++|+++||+|+++++|++++++++|||+++
T Consensus 61 ~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~~lA~~~~ 140 (647)
T PTZ00237 61 CYNVLDIHVKNPLKRDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAMLSCARI 140 (647)
T ss_pred HHHHHHHhhcccCCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHh
Confidence 46778888754 7999999873 368999999999999999999999999999999999999999999999999
Q ss_pred CceEeeccccCCHHHHHHHHhcCCceEEEEcccc---------hHHHHHHHHHHhhhcCCCCCcCeEEEecCCCc-chhh
Q 008342 94 GAVLNSINIRLNATVVAFILSHASSAVVIVDQEF---------FSLAEEALKMMEANSEGKLKTPHLIVIGDESC-DSKQ 163 (569)
Q Consensus 94 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~ 163 (569)
|++++|+++.++.+++.++|++++++++|+++.. .+.+.++.. .. .....+++.+..... ....
T Consensus 141 Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~vi~~~~~~~~~~~~ 214 (647)
T PTZ00237 141 GATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIE-LS-----TFKPSNVITLFRNDITSESD 214 (647)
T ss_pred CcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHh-cc-----cCCCCEEEEEEcCCcccccc
Confidence 9999999999999999999999999999997631 222222222 11 001234554422110 0000
Q ss_pred h----HHhhhcchhhHHhhhhcCC----CCCCCCCCCCcCceEEEEeccCCCCCCcceeecchH-HHHHHHHhHhHhCCC
Q 008342 164 L----EYALARGAIEYEKFLETGD----PEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRG-AYLMSLNGALIWGMN 234 (569)
Q Consensus 164 ~----~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~-~~~~~~~~~~~~~~~ 234 (569)
. ..........|++++.... ..........++++++|+|||||||.||+|+++|.+ +..........+...
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~ 294 (647)
T PTZ00237 215 LKKIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSIIEKD 294 (647)
T ss_pred cccccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhcCCC
Confidence 0 0000112345666654321 111111235678999999999999999999999998 443333333445677
Q ss_pred CCcEEEEcCCccchhhHHHHHHHHHhcceEEEecc--CC----hHHHHHHHHhcCccEEeehHHHHHHHHccCCC-----
Q 008342 235 EGAVFLWTLPMFHGNGWSYTWSLAALCGTSICLRQ--VT----AKAVYTAIATHGVTHFCAAPVVLNAIANASPE----- 303 (569)
Q Consensus 235 ~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~--~~----~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~----- 303 (569)
.++++++..|+.|+.+....+.+++.|+++++... +. +..+++.|+++++|++.++|++++.|.+....
T Consensus 295 ~~d~~~~~~~~~w~~~~~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~ 374 (647)
T PTZ00237 295 IPTVVFSHSSIGWVSFHGFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEATIIR 374 (647)
T ss_pred CCcEEEEcCCCceEeeHHHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCccccccc
Confidence 88999999999998877666777778888877643 12 67899999999999999999999999875422
Q ss_pred CCCCCcccceeeeecCCCCCHHHHHHhhh-cCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccC
Q 008342 304 DTILPLTNVVNVNTAGAPPPPSLLFAMSQ-KGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLD 382 (569)
Q Consensus 304 ~~~~~l~~l~~~~~~g~~l~~~~~~~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 382 (569)
.... +++||.++++|+++++++.+++++ +|+++++.||+||+++..+..... .....+++|.|.+++
T Consensus 375 ~~~~-l~~Lr~i~~~G~~l~~~~~~~~~~~~g~~i~~~yG~TE~~~~~~~~~~~----------~~~~~~s~G~p~~g~- 442 (647)
T PTZ00237 375 SKYD-LSNLKEIWCGGEVIEESIPEYIENKLKIKSSRGYGQTEIGITYLYCYGH----------INIPYNATGVPSIFI- 442 (647)
T ss_pred cccC-cchheEEEecCccCCHHHHHHHHHhcCCCEEeeechHHhChhhhccCCC----------CCCCCCCCccCcCCc-
Confidence 1223 789999999999999999999885 599999999999998654432210 111237899999999
Q ss_pred CceeeeCCCCcccCCCCCceEEEEEecC---cccccccCCcchhhhhhc--CCeeecCceeEEcCCCeEEEecccCceEE
Q 008342 383 GLDVIDARTNQPVPADGKTIGEIVMRGS---CVMKGYLKNPKANEEAFA--NGWFHSGDLAVKHPDNYIEIKDRLKDVII 457 (569)
Q Consensus 383 ~~~i~d~~~~~~~~~~~~~~Gel~v~~~---~~~~gy~~~~~~~~~~~~--~g~~~tGD~~~~~~~g~l~~~GR~~d~i~ 457 (569)
+++|+|++ |++++.| +.|||+++++ +++.|||++++.+...|. +|||+|||+|+++++|+++++||.||+|+
T Consensus 443 ~~~i~d~~-g~~~~~g--e~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d~dG~l~i~GR~dd~i~ 519 (647)
T PTZ00237 443 KPSILSED-GKELNVN--EIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKDENGYYTIVSRSDDQIK 519 (647)
T ss_pred eEEEECCC-CCCCCCC--CceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEECCCCeEEEEeccCCEEE
Confidence 69999984 8999877 7899999986 788999999998887775 79999999999999999999999999999
Q ss_pred eCceeechHHHHHHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcc--hhhhhhHHHHHHHHHHhcCCCCcCCceEE
Q 008342 458 SGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEAD--ELDKGKLAEDVSKFCRAKMPSYWVPKSVV 535 (569)
Q Consensus 458 ~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~--~~~~~~~~~~l~~~~~~~l~~~~~p~~i~ 535 (569)
++|++|+|.+||++|.+||.|.+++|++.+++..|+.++++|++.++.. ..+.++..++|.++++++|+++++|..++
T Consensus 520 ~~G~rI~p~eIE~~l~~~p~V~eaavvg~~~~~~g~~~~a~Vv~~~~~~~~~~~~~~l~~~i~~~~~~~l~~~~~P~~i~ 599 (647)
T PTZ00237 520 ISGNKVQLNTIETSILKHPLVLECCSIGIYDPDCYNVPIGLLVLKQDQSNQSIDLNKLKNEINNIITQDIESLAVLRKII 599 (647)
T ss_pred ECCEEeCHHHHHHHHHhCCCceeeEEEeeEcCCCCCEEEEEEEeccCccccCCCHHHHHHHHHHHHHhhcCccccCcEEE
Confidence 9999999999999999999999999999999998999999999875421 11223466889999999999999999999
Q ss_pred ecc-CCCCCCCcccHHHHHHHHHhcC
Q 008342 536 FAA-LPKSATGKIQKHLLRAKAKEMG 560 (569)
Q Consensus 536 ~~~-lP~t~~GKi~r~~l~~~~~~~~ 560 (569)
+++ ||+|++||++|+.|++++....
T Consensus 600 ~v~~lP~T~sGKi~R~~Lr~~~~~~~ 625 (647)
T PTZ00237 600 IVNQLPKTKTGKIPRQIISKFLNDSN 625 (647)
T ss_pred EcCCCCCCCCccEeHHHHHHHHcCCC
Confidence 877 9999999999999999986543
No 8
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.5e-71 Score=587.12 Aligned_cols=496 Identities=24% Similarity=0.317 Sum_probs=419.7
Q ss_pred cCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEee
Q 008342 20 LTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNS 99 (569)
Q Consensus 20 ~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 99 (569)
.++.++++++++.+|+++|+++.++++||+||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 49 ~~~~~~~~~~a~~~pd~~Al~~~~~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~ 128 (549)
T PRK07788 49 GPFAGLVAHAARRAPDRAALIDERGTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGKVGARIIL 128 (549)
T ss_pred chHHHHHHHHHHHCCCceEEEECCCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEE
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHhhh
Q 008342 100 INIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEKFL 179 (569)
Q Consensus 100 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l 179 (569)
+++.++.+++.+++++++++++|++.+....+........ ....++...+... ....++..+++++
T Consensus 129 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 194 (549)
T PRK07788 129 LNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLG-------RLRAWGGNPDDDE-------PSGSTDETLDDLI 194 (549)
T ss_pred eCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccc-------cceEEEEecCccc-------cCCcCcccHHHHh
Confidence 9999999999999999999999999876555443211111 1111211111110 0113445677776
Q ss_pred hcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHHHHHHH
Q 008342 180 ETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTWSLAA 259 (569)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~ 259 (569)
....... .+...+++++++|||||||.||+|.++|.++..........+++..+++++...|++|.+|+...+.++.
T Consensus 195 ~~~~~~~---~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l~ 271 (549)
T PRK07788 195 AGSSTAP---LPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFRAGETTLLPAPMFHATGWAHLTLAMA 271 (549)
T ss_pred cCCCCCC---CCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCCCCcCCeEEEccchHHHHHHHHHHHHHH
Confidence 5433221 1234567899999999999999999999999988777777888899999999999999999987777777
Q ss_pred hcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCC--CCCCCcccceeeeecCCCCCHHHHHHhhh-cCCe
Q 008342 260 LCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPE--DTILPLTNVVNVNTAGAPPPPSLLFAMSQ-KGFR 336 (569)
Q Consensus 260 ~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~--~~~~~l~~l~~~~~~g~~l~~~~~~~~~~-~~~~ 336 (569)
.|+++++...+++..+++.++++++|++.++|+++..+++.... .... ++++|.+++||+++++++.+++.+ ++.+
T Consensus 272 ~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~-~~~lr~i~~gG~~l~~~~~~~~~~~~~~~ 350 (549)
T PRK07788 272 LGSTVVLRRRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYD-TSSLKIIFVSGSALSPELATRALEAFGPV 350 (549)
T ss_pred hCCEEEECCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCC-CCceeEEEEeCCCCCHHHHHHHHHHhCcc
Confidence 78887777788999999999999999999999999999887554 3333 789999999999999999999985 5889
Q ss_pred EecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccccc
Q 008342 337 ITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGY 416 (569)
Q Consensus 337 i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy 416 (569)
+++.||+||++..+..+.. .......++|.|.+++ +++++|++ +++++.| +.|||+++|+.++.||
T Consensus 351 l~~~YG~TE~~~~~~~~~~----------~~~~~~~~vG~~~~~~-~~~i~d~~-~~~~~~g--~~Gel~v~g~~~~~gY 416 (549)
T PRK07788 351 LYNLYGSTEVAFATIATPE----------DLAEAPGTVGRPPKGV-TVKILDEN-GNEVPRG--VVGRIFVGNGFPFEGY 416 (549)
T ss_pred ceeccCcchhchhhccChh----------hhhhcCCCcccCCCCc-EEEEECCC-cCCCCCC--CeEEEEEeCCCccccc
Confidence 9999999999865443221 1112346899999999 69999986 8888887 8999999999999999
Q ss_pred cCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCCCCceee
Q 008342 417 LKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGESPC 496 (569)
Q Consensus 417 ~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~ 496 (569)
++++.. ...+|||+|||+++++++|.+++.||.||+|+++|++|+|.+||++|.++|.|.+++|++.+++..|+.+.
T Consensus 417 ~~~~~~---~~~~g~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~ 493 (549)
T PRK07788 417 TDGRDK---QIIDGLLSSGDVGYFDEDGLLFVDGRDDDMIVSGGENVFPAEVEDLLAGHPDVVEAAVIGVDDEEFGQRLR 493 (549)
T ss_pred cCCCcc---cccCCceecCceEEEcCCCCEEEeccCcceEEECCEEECHHHHHHHHHhCCCeeEEEEECCcCcccccEEE
Confidence 988765 34589999999999999999999999999999999999999999999999999999999999998899999
Q ss_pred EEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHH
Q 008342 497 AFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAK 555 (569)
Q Consensus 497 ~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~ 555 (569)
++|++.++... ..++|.++++++|+.|++|..+.+++ ||+|++||++|++|+++
T Consensus 494 a~vv~~~~~~~-----~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~ 548 (549)
T PRK07788 494 AFVVKAPGAAL-----DEDAIKDYVRDNLARYKVPRDVVFLDELPRNPTGKVLKRELREM 548 (549)
T ss_pred EEEEeCCCCCC-----CHHHHHHHHHHhhhcCCCCcEEEEeCCCCCCCCcCEeHHHhhcc
Confidence 99998775443 45789999999999999999999777 99999999999999753
No 9
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=1.9e-70 Score=581.63 Aligned_cols=563 Identities=77% Similarity=1.272 Sum_probs=454.5
Q ss_pred CCCcccCCccccccccccccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCc
Q 008342 1 MVGVKDIDDLPKISANYTALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNV 80 (569)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~ 80 (569)
|.-+.+++.+...-+.+.++++..++++.+..+|+++|+.+.+.++||+||.++++++|.+|.+.|+++||+|+++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~ 80 (567)
T PLN02479 1 MAKERDIDDLPKNAANYTALTPLWFLERAAVVHPTRKSVVHGSVRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNI 80 (567)
T ss_pred CccccccccccCccccccccCHHHHHHHHHhhCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCc
Confidence 44567788888888888889999999999999999999999989999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcc
Q 008342 81 PAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCD 160 (569)
Q Consensus 81 ~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 160 (569)
++++++++||+++|++++|+++.++.+++.++++.++++++|++++..+...++...+............++.+.+....
T Consensus 81 ~~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (567)
T PLN02479 81 PAMYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCD 160 (567)
T ss_pred HHHHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCC
Confidence 99999999999999999999999999999999999999999999887665555443332110111122344554432211
Q ss_pred hhhhHHhhhcchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEE
Q 008342 161 SKQLEYALARGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFL 240 (569)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~ 240 (569)
..........+...|.+++....+..........+++++++|||||||.||+|.+||+++..........+++.++++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~ 240 (567)
T PLN02479 161 PKSLQYALGKGAIEYEKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWGMNEGAVYL 240 (567)
T ss_pred ccccccccccCcccHHHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcCCCCCCEEE
Confidence 11111111234456777765543322222223345678899999999999999999999877666666677888999999
Q ss_pred EcCCccchhhHHHHHHHHHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCC
Q 008342 241 WTLPMFHGNGWSYTWSLAALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGA 320 (569)
Q Consensus 241 ~~~p~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~ 320 (569)
+.+|++|.+++...+...+.+|..+++..+++..+++.++++++|++.++|.++..|...........+++++.++++|+
T Consensus 241 ~~~p~~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~~G~ 320 (567)
T PLN02479 241 WTLPMFHCNGWCFTWTLAALCGTNICLRQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILPLPRVVHVMTAGA 320 (567)
T ss_pred EecchhhhhhHHHHHHHHhhcCceEeccCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcccccccceeEEEEcCC
Confidence 99999999998777766667777777788899999999999999999999999999987644332212788999999999
Q ss_pred CCCHHHHHHhhhcCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCC
Q 008342 321 PPPPSLLFAMSQKGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGK 400 (569)
Q Consensus 321 ~l~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~ 400 (569)
++++.+.+++.+.++++++.||+||+++.++.+...+.|...+.........+.|.+.++++.++|+|++++.+++.+++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~ 400 (567)
T PLN02479 321 APPPSVLFAMSEKGFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGK 400 (567)
T ss_pred CCCHHHHHHHHhcCCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCC
Confidence 99999999998779999999999999766555433333222222111122245677888775588999777888887554
Q ss_pred ceEEEEEecCcccccccCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCcee
Q 008342 401 TIGEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLE 480 (569)
Q Consensus 401 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~ 480 (569)
+.|||+++|++++.|||++++.+...|.+|||+|||+++++++|.++++||.||+|+.+|.+|+|.+||.+|.++|.|.+
T Consensus 401 ~~GEl~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~ 480 (567)
T PLN02479 401 TMGEIVMRGNMVMKGYLKNPKANEEAFANGWFHSGDLGVKHPDGYIEIKDRSKDIIISGGENISSLEVENVVYTHPAVLE 480 (567)
T ss_pred CceEEEEeccchhhhhhcCcccccchhcCCceecceeEEEcCCccEEEeccccceEEeCCEEEcHHHHHHHHHhCcccce
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEeccCCCCCCCcccHHHHHHHHHhcC
Q 008342 481 AAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAALPKSATGKIQKHLLRAKAKEMG 560 (569)
Q Consensus 481 ~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~lP~t~~GKi~r~~l~~~~~~~~ 560 (569)
++|++.+++..++.+.+++++.++....+.....++|.++++++|+.|++|..+.+.+||+|++||++|+.|++.+..+.
T Consensus 481 ~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~~~iP~t~~gKv~r~~L~~~~~~~~ 560 (567)
T PLN02479 481 ASVVARPDERWGESPCAFVTLKPGVDKSDEAALAEDIMKFCRERLPAYWVPKSVVFGPLPKTATGKIQKHVLRAKAKEMG 560 (567)
T ss_pred eeEEeccchhcCceeEEEEEecCcccccchhhhHHHHHHHHHhhcccccCCceEEeccCCCCCccCeeHHHHHHHHHhhC
Confidence 99999988887889999998876643222223567899999999999999999888669999999999999999988766
Q ss_pred Ccc
Q 008342 561 PVK 563 (569)
Q Consensus 561 ~~~ 563 (569)
...
T Consensus 561 ~~~ 563 (567)
T PLN02479 561 PVK 563 (567)
T ss_pred Ccc
Confidence 543
No 10
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=5.1e-70 Score=584.04 Aligned_cols=517 Identities=20% Similarity=0.246 Sum_probs=413.4
Q ss_pred HHHHHHhhhhCCCceeeeeC------CeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCce
Q 008342 23 LWFINRAATLHPTRKSVVYG------SKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAV 96 (569)
Q Consensus 23 ~~~l~~~a~~~p~~~a~~~~------~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 96 (569)
.+++++++..+|+++|+++. ++++||+||.+++.++|++|.++|+++||+|+++++|++++++++|||+++|++
T Consensus 55 ~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~~~~Gav 134 (628)
T TIGR02316 55 HNALDRHLDERGEQLALVTVSSETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLACARIGAI 134 (628)
T ss_pred HHHHHHHhCcCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCCE
Confidence 57888888899999999872 378999999999999999999999999999999999999999999999999999
Q ss_pred EeeccccCCHHHHHHHHhcCCceEEEEcccch---------HHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHh
Q 008342 97 LNSINIRLNATVVAFILSHASSAVVIVDQEFF---------SLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYA 167 (569)
Q Consensus 97 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 167 (569)
++|+++.++.+++.+++++++++++|+++... ..+..+..... ....+++.++....... .
T Consensus 135 ~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~vi~~~~~~~~~~----~ 204 (628)
T TIGR02316 135 HSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQ------HPPPHVLLVDRGLAPMR----L 204 (628)
T ss_pred EEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcC------CCCCEEEEEeCCCCCcC----c
Confidence 99999999999999999999999999976431 22222222111 02355666654211100 0
Q ss_pred hhcchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHH-HHHhHhHhCCCCCcEEEEcCCcc
Q 008342 168 LARGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLM-SLNGALIWGMNEGAVFLWTLPMF 246 (569)
Q Consensus 168 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~-~~~~~~~~~~~~~d~~~~~~p~~ 246 (569)
.......|.+++..............++++++|+|||||||.||+|+++|.+++.. .......++++++|++++..|++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 284 (628)
T TIGR02316 205 IPGRDVDYAALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVMFSASDVG 284 (628)
T ss_pred ccCccccHHHHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCC
Confidence 01112456665544322111112246789999999999999999999999997544 34445567899999999999999
Q ss_pred chhhHHH-HHHHHHhcceEEEec----cCChHHHHHHHHhcCccEEeehHHHHHHHHccCCC--CCCCCcccceeeeecC
Q 008342 247 HGNGWSY-TWSLAALCGTSICLR----QVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPE--DTILPLTNVVNVNTAG 319 (569)
Q Consensus 247 ~~~g~~~-~~~~~~~g~~~~~~~----~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~--~~~~~l~~l~~~~~~g 319 (569)
|..|+.. .+..++.|+++++.. .+++..+++.|+++++|++.++|++++.|.+.... .... +++||.+++||
T Consensus 285 ~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~-l~~lr~~~~gG 363 (628)
T TIGR02316 285 WVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHD-LSSLHWLFLAG 363 (628)
T ss_pred eeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCC-ccceeEEEEec
Confidence 9998755 444556666766664 24788999999999999999999999998876432 2223 88999999999
Q ss_pred CCCCHHHHHHhhh-cCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCC
Q 008342 320 APPPPSLLFAMSQ-KGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPAD 398 (569)
Q Consensus 320 ~~l~~~~~~~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~ 398 (569)
+++++++.+++++ ++.++++.||+||++..++....... ......+++|.|++++ +++|+|+++|++++.+
T Consensus 364 e~l~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~-------~~~~~~gs~G~p~~g~-~v~i~d~~~g~~~~~g 435 (628)
T TIGR02316 364 EPLDEPTAHWITDGLGKPVIDNYWQTETGWPVLAIMPGLD-------LKPVKLGSPGLPMYGY-HLRVLDEATGRPCGPN 435 (628)
T ss_pred CCCCHHHHHHHHHHhCCCEEecccccccCceeecCCCCCC-------cCCCCCCCcccCcCCc-eEEEEECCCCCCCCCC
Confidence 9999999998874 58999999999999854433221110 0112347889999999 6999999779999887
Q ss_pred CCceEEEEEecC---cccccccCCcchhhhhh----cCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHH
Q 008342 399 GKTIGEIVMRGS---CVMKGYLKNPKANEEAF----ANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKV 471 (569)
Q Consensus 399 ~~~~Gel~v~~~---~~~~gy~~~~~~~~~~~----~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~ 471 (569)
+.|||+++|| ..+.+||++++.+...+ .++||+|||+|++|+||+++++||.||+||++|.+|+|.+||++
T Consensus 436 --~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv~~~eIE~~ 513 (628)
T TIGR02316 436 --EKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDEDGYTFILGRTDDVINVAGHRLGTREIEES 513 (628)
T ss_pred --CcEEEEEecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEcCCCcEEEEEcCcceEEeCCEEeCHHHHHHH
Confidence 7899999998 46789999887665543 56799999999999999999999999999999999999999999
Q ss_pred HhcCCCceeeEEEeecCCCCCceeeEEEEecCCcchh---hhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcc
Q 008342 472 LYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADEL---DKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKI 547 (569)
Q Consensus 472 l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~---~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi 547 (569)
|.+||.|.+++|++.+++..|+.++++|++.++.... +.....++|+++++++|+.|++|..+.+++ ||+|++||+
T Consensus 514 l~~~p~V~ea~Vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~L~~~~~P~~v~~v~~lP~t~sGKi 593 (628)
T TIGR02316 514 VSSHPSVAEVAVVGVHDELKGQVAVVFAILKESDSAGDAHDPHAVETGMMDCVVRQLGAVARPARVYFVAALPKTRSGKL 593 (628)
T ss_pred HHhCCCcceEEEEeeecCCCCeEEEEEEEEcCCcccccccchHHHHHHHHHHHHHhcCCCcCCCEEEEcCCCCCCCchHH
Confidence 9999999999999999999899999999987654311 122366889999999999999999999877 999999999
Q ss_pred cHHHHHHHHHhcC
Q 008342 548 QKHLLRAKAKEMG 560 (569)
Q Consensus 548 ~r~~l~~~~~~~~ 560 (569)
+|+.|++++....
T Consensus 594 ~r~~L~~~~~~~~ 606 (628)
T TIGR02316 594 LRRSIQALAEGRD 606 (628)
T ss_pred HHHHHHHHHcCCC
Confidence 9999999886543
No 11
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=4.5e-70 Score=585.67 Aligned_cols=520 Identities=19% Similarity=0.230 Sum_probs=411.0
Q ss_pred cCH-HHHHHHhhh-hCCCceeeeeC------CeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhh
Q 008342 20 LTP-LWFINRAAT-LHPTRKSVVYG------SKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAP 91 (569)
Q Consensus 20 ~~l-~~~l~~~a~-~~p~~~a~~~~------~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~ 91 (569)
.|+ .++|++++. .+|+++|+++. .+++||+||.+++.++|++|++.|+++||+|+++++|++++++++|||+
T Consensus 87 ~N~~~~~l~~~~~~~~~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA~~ 166 (666)
T PLN02654 87 TNICYNCLDRNVEAGNGDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLACA 166 (666)
T ss_pred eeHHHHHHHHhhccCCCCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 444 578888875 48999999874 2689999999999999999999999999999999999999999999999
Q ss_pred hcCceEeeccccCCHHHHHHHHhcCCceEEEEcccchH---------HHHHHHHHHhhhcCCCCCcCeEEEecCCCcchh
Q 008342 92 MAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFS---------LAEEALKMMEANSEGKLKTPHLIVIGDESCDSK 162 (569)
Q Consensus 92 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 162 (569)
++|++++|+++.++.+++..++++++++++|+++.... .+..+..... ........++.+........
T Consensus 167 ~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 243 (666)
T PLN02654 167 RIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESA---KNGVSVGICLTYENQLAMKR 243 (666)
T ss_pred HcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhcc---ccCCCccEEEEecccccccc
Confidence 99999999999999999999999999999999876432 1222211110 00001122233222110000
Q ss_pred hhHHhhhcchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHH-HHHhHhHhCCCCCcEEEE
Q 008342 163 QLEYALARGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLM-SLNGALIWGMNEGAVFLW 241 (569)
Q Consensus 163 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~-~~~~~~~~~~~~~d~~~~ 241 (569)
............|++++...... ........+++++|+|||||||.||+|+++|.+++.. .......++++++|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~~~~d~~~~ 322 (666)
T PLN02654 244 EDTKWQEGRDVWWQDVVPNYPTK-CEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPTDVYWC 322 (666)
T ss_pred cccccccCCcccHHHHhhcCCCC-CCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcCCCCCcEEEE
Confidence 00000001123355554332211 1112246789999999999999999999999997644 344555678999999999
Q ss_pred cCCccchhhHHHHH-HHHHhcceEEEecc----CChHHHHHHHHhcCccEEeehHHHHHHHHccCCC--CCCCCccccee
Q 008342 242 TLPMFHGNGWSYTW-SLAALCGTSICLRQ----VTAKAVYTAIATHGVTHFCAAPVVLNAIANASPE--DTILPLTNVVN 314 (569)
Q Consensus 242 ~~p~~~~~g~~~~~-~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~--~~~~~l~~l~~ 314 (569)
..|+.|++|..+.+ ..++.|+++++... +++..+++.|+++++|++.++|++++.|.+.... .... +++||.
T Consensus 323 ~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~-l~~Lr~ 401 (666)
T PLN02654 323 TADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHS-RKSLRV 401 (666)
T ss_pred cCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCC-hhheeE
Confidence 99999999976554 44566777777643 5789999999999999999999999999876532 2223 789999
Q ss_pred eeecCCCCCHHHHHHhhh-cC---CeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCC
Q 008342 315 VNTAGAPPPPSLLFAMSQ-KG---FRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDAR 390 (569)
Q Consensus 315 ~~~~g~~l~~~~~~~~~~-~~---~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~ 390 (569)
++++|++++++..+++.+ +| +++.+.||+||+++..+..... ......+++|.|.+++ +++|+|++
T Consensus 402 i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~~---------~~~~~~gs~G~p~~g~-~v~i~d~~ 471 (666)
T PLN02654 402 LGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPG---------AWPQKPGSATFPFFGV-QPVIVDEK 471 (666)
T ss_pred EEEecCCCCHHHHHHHHHHhCCCCCceeccccccccCCeeeccCCC---------CCCCCCCccCCCCCCc-eEEEECCC
Confidence 999999999999998874 46 7899999999998765432211 0112347899999999 69999976
Q ss_pred CCcccCCCCCceEEEEEec--CcccccccCCcchhhhhh---cCCeeecCceeEEcCCCeEEEecccCceEEeCceeech
Q 008342 391 TNQPVPADGKTIGEIVMRG--SCVMKGYLKNPKANEEAF---ANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISS 465 (569)
Q Consensus 391 ~~~~~~~~~~~~Gel~v~~--~~~~~gy~~~~~~~~~~~---~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~ 465 (569)
|++++.+ +.|||++++ |.++.|||++++.+...+ .+|||+|||++++|+||+++++||.||+|+++|++|+|
T Consensus 472 -g~~~~~~--~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~p 548 (666)
T PLN02654 472 -GKEIEGE--CSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGT 548 (666)
T ss_pred -CCCCCCC--CceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECCCCcEEEeeeccCeEEeCCEEECH
Confidence 8888765 689999999 789999999998877655 27999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCC
Q 008342 466 VEVEKVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSAT 544 (569)
Q Consensus 466 ~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~ 544 (569)
.+||.+|.+||.|.+++|++.+++..|+.++++|++.++... ..+..++|.++++++|+.+++|..+.+++ ||+|++
T Consensus 549 ~EIE~~l~~~p~V~eaaVvg~~d~~~ge~~~a~Vvl~~~~~~--~~~l~~~l~~~~~~~L~~~~~P~~i~~v~~lP~T~s 626 (666)
T PLN02654 549 AEVESALVSHPQCAEAAVVGIEHEVKGQGIYAFVTLVEGVPY--SEELRKSLILTVRNQIGAFAAPDKIHWAPGLPKTRS 626 (666)
T ss_pred HHHHHHHHhCCCeeeEEEEeeEcCCCCeEEEEEEEECCCCCC--CHHHHHHHHHHHHHhCCCCcCCCEEEECCCCCCCCC
Confidence 999999999999999999999999999999999999876432 12256789999999999999999999887 999999
Q ss_pred CcccHHHHHHHHHhc
Q 008342 545 GKIQKHLLRAKAKEM 559 (569)
Q Consensus 545 GKi~r~~l~~~~~~~ 559 (569)
||++|+.|++.+.+.
T Consensus 627 GKi~r~~l~~~~~~~ 641 (666)
T PLN02654 627 GKIMRRILRKIASRQ 641 (666)
T ss_pred cCchHHHHHHHHcCC
Confidence 999999999998753
No 12
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=7.8e-70 Score=576.38 Aligned_cols=525 Identities=22% Similarity=0.286 Sum_probs=417.8
Q ss_pred ccccccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcC
Q 008342 15 ANYTALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAG 94 (569)
Q Consensus 15 ~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 94 (569)
++..+.++.++|++.+.++|+++|+++.++++||+||.++++++|++|.++|+++||+|+++++|++++++++|||+++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~G 81 (563)
T PLN02860 2 ANHSQAHICQCLTRLATLRGNAVVTISGNRRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVACAG 81 (563)
T ss_pred cchhhhHHHHHHHHHHHhcCCceEEecCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhcc
Confidence 35668899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHH-HHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchh
Q 008342 95 AVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEAL-KMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAI 173 (569)
Q Consensus 95 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 173 (569)
++++|+++.++.+++.++++++++++++++++......... ..++ ....++.+++...... .......
T Consensus 82 av~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-------~~~~~i~~~~~~~~~~----~~~~~~~ 150 (563)
T PLN02860 82 GIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLP-------SLMWQVFLESPSSSVF----IFLNSFL 150 (563)
T ss_pred EEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCC-------ceeEEEEecCcccccc----cchhhcc
Confidence 99999999999999999999999999999876533222221 0011 1222333332210000 0000111
Q ss_pred hHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHH
Q 008342 174 EYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSY 253 (569)
Q Consensus 174 ~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~ 253 (569)
.++++...............++++++++|||||||.||+|.++|.++..+.......+++.++|+++...|++|.+|+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~ 230 (563)
T PLN02860 151 TTEMLKQRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 230 (563)
T ss_pred ccchhccCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcCCCCCCEEEEecCchhhccHHH
Confidence 11221111101111112235689999999999999999999999999887777667788999999999999999999988
Q ss_pred HHHHHHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCC-CCCcccceeeeecCCCCCHHHHHHhhh
Q 008342 254 TWSLAALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDT-ILPLTNVVNVNTAGAPPPPSLLFAMSQ 332 (569)
Q Consensus 254 ~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~-~~~l~~l~~~~~~g~~l~~~~~~~~~~ 332 (569)
.+..+..|+++++.+.+++..+++.|+++++|++.++|+++..|++...... ...++++|.+++||+++++++.+++++
T Consensus 231 ~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~ 310 (563)
T PLN02860 231 ALAMLMVGACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDAKK 310 (563)
T ss_pred HHHHHHcCceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCCcCCHHHHHHHHH
Confidence 8888888999888888999999999999999999999999999987643211 122789999999999999999999985
Q ss_pred c--CCeEecccccccCCCCccccccCCCCCC-C-----------CchhhhhccccCCceeeccCCceeeeCCCCcccCCC
Q 008342 333 K--GFRITHTYGLTELTGPASVCAWKPEWDS-L-----------PFETQARLNARQGVRTICLDGLDVIDARTNQPVPAD 398 (569)
Q Consensus 333 ~--~~~i~~~YG~tE~~~~~~~~~~~~~~~~-~-----------~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~ 398 (569)
. ++++++.||+||+++.++.......... . ..........++|.|.+++ +++|++++ .+
T Consensus 311 ~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~-~v~i~~~~------~g 383 (563)
T PLN02860 311 LFPNAKLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHV-ELKIGLDE------SS 383 (563)
T ss_pred hcCCCceecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCc-EEEEecCC------CC
Confidence 4 7899999999999865543322111000 0 0000011123689999999 69998865 23
Q ss_pred CCceEEEEEecCcccccccCCcchhhhhh-cCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCC
Q 008342 399 GKTIGEIVMRGSCVMKGYLKNPKANEEAF-ANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPL 477 (569)
Q Consensus 399 ~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~ 477 (569)
+.|||+++|+.++.|||++++.+...| .+|||+|||+|+++++|++++.||.+|+|+++|++|+|.+||++|.+||.
T Consensus 384 --~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~ 461 (563)
T PLN02860 384 --RVGRILTRGPHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDKAGNLWLIGRSNDRIKTGGENVYPEEVEAVLSQHPG 461 (563)
T ss_pred --ceeEEEEecCcccccccCCccccchhccCCCeEEccceEEEcCCCCEEEeecccceeEECCEEccHHHHHHHHHhCCC
Confidence 789999999999999999999888877 48999999999999999999999999999999999999999999999999
Q ss_pred ceeeEEEeecCCCCCceeeEEEEecCCcchh---------hhhhHHHHHHHHHHh-cCCCCcCCceEEe-cc-CCCCCCC
Q 008342 478 VLEAAVVARPDERWGESPCAFVTLKPEADEL---------DKGKLAEDVSKFCRA-KMPSYWVPKSVVF-AA-LPKSATG 545 (569)
Q Consensus 478 v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~---------~~~~~~~~l~~~~~~-~l~~~~~p~~i~~-~~-lP~t~~G 545 (569)
|.+++|++.+++..++.+++++++.++.... ......++|.+++++ .|+.|++|..+++ .+ ||+|++|
T Consensus 462 V~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~~~~~~~~lP~t~~G 541 (563)
T PLN02860 462 VASVVVVGVPDSRLTEMVVACVRLRDGWIWSDNEKENAKKNLTLSSETLRHHCREKNLSRFKIPKLFVQWRKPFPLTTTG 541 (563)
T ss_pred cceeEEEEEecCcCCceEEEEEEECCccccccccchhhcccccccHHHHHHHHhhCcccccccceEEEEEecCCCCCccc
Confidence 9999999999998899999999987652110 011245788999987 5999999998864 45 9999999
Q ss_pred cccHHHHHHHHHhc
Q 008342 546 KIQKHLLRAKAKEM 559 (569)
Q Consensus 546 Ki~r~~l~~~~~~~ 559 (569)
|++|++|++++.+.
T Consensus 542 Ki~r~~L~~~~~~~ 555 (563)
T PLN02860 542 KIRRDEVRREVLSH 555 (563)
T ss_pred chhHHHHHHHHHHH
Confidence 99999999988654
No 13
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.5e-69 Score=579.92 Aligned_cols=517 Identities=26% Similarity=0.366 Sum_probs=416.9
Q ss_pred ccccCHHHHHHHhhhhCCCceeeeeC--------CeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHH
Q 008342 17 YTALTPLWFINRAATLHPTRKSVVYG--------SKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQF 88 (569)
Q Consensus 17 ~~~~~l~~~l~~~a~~~p~~~a~~~~--------~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~l 88 (569)
..+.|++++|+++++++|+++|+++. .+++||+||.+++.++|++|.++|+++||+|+++++|++++++++|
T Consensus 22 ~~~~t~~~~l~~~a~~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~l 101 (632)
T PRK07529 22 DLPASTYELLSRAAARHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALW 101 (632)
T ss_pred cCCCCHHHHHHHHHHHCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 34669999999999999999999862 4789999999999999999999999999999999999999999999
Q ss_pred HhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccch-----HHHHHHHHHHhhhcCCCCCcCeEEEecCCCcc--h
Q 008342 89 GAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFF-----SLAEEALKMMEANSEGKLKTPHLIVIGDESCD--S 161 (569)
Q Consensus 89 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~ 161 (569)
||+++| +++|+++.++.+++.++++.++++++|++.... ..+.......+ ....++.++..... .
T Consensus 102 A~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~ 173 (632)
T PRK07529 102 GGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALP-------ELRTVVEVDLARYLPGP 173 (632)
T ss_pred HHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCC-------cceeEEEecCccccccc
Confidence 999999 569999999999999999999999999986542 22222222222 34455555433210 0
Q ss_pred hhhHH-----hhhcchhhHHhhhhcCCCCCC-CCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCC
Q 008342 162 KQLEY-----ALARGAIEYEKFLETGDPEFA-WKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNE 235 (569)
Q Consensus 162 ~~~~~-----~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~ 235 (569)
+.+.. ....+...|.+.+........ ......++++++++|||||||.||+|.+||++++.........+++.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~ 253 (632)
T PRK07529 174 KRLAVPLIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLLGLGP 253 (632)
T ss_pred ccccccccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhcCCCC
Confidence 00000 011234556666555432221 112346789999999999999999999999999888877777788899
Q ss_pred CcEEEEcCCccchhhHHHHHHHH-HhcceEEEecc--C----ChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCC
Q 008342 236 GAVFLWTLPMFHGNGWSYTWSLA-ALCGTSICLRQ--V----TAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILP 308 (569)
Q Consensus 236 ~d~~~~~~p~~~~~g~~~~~~~~-~~g~~~~~~~~--~----~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~ 308 (569)
+|++++.+|++|.+++...+... ..|+++++.++ + ....+++.++++++|++.++|+++..|.+..... ..
T Consensus 254 ~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~-~~- 331 (632)
T PRK07529 254 GDTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPVDG-HD- 331 (632)
T ss_pred CCEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcccC-CC-
Confidence 99999999999999987655554 45666655532 1 1367899999999999999999999998875432 23
Q ss_pred cccceeeeecCCCCCHHHHHHhhh-cCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceee
Q 008342 309 LTNVVNVNTAGAPPPPSLLFAMSQ-KGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVI 387 (569)
Q Consensus 309 l~~l~~~~~~g~~l~~~~~~~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~ 387 (569)
++++|.+++||+++++++.+++++ +++++++.||+||++.++..+... .....+++|.|.+++ .++++
T Consensus 332 ~~slr~v~~gg~~l~~~l~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~----------~~~~~~svG~~~p~~-~v~i~ 400 (632)
T PRK07529 332 ISSLRYALCGAAPLPVEVFRRFEAATGVRIVEGYGLTEATCVSSVNPPD----------GERRIGSVGLRLPYQ-RVRVV 400 (632)
T ss_pred ccceEEEEEcCCCCCHHHHHHHHHHhCCcEeeeecccccCcccccCCcc----------ccccCCCcccccCCc-eEEEE
Confidence 789999999999999999999985 499999999999998766543211 112347899999998 58885
Q ss_pred --eCCCC---cccCCCCCceEEEEEecCcccccccCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCcee
Q 008342 388 --DARTN---QPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGEN 462 (569)
Q Consensus 388 --d~~~~---~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~ 462 (569)
|++ + ++++.| +.|||+++|++++.||++++......+.+|||+|||+|++++||.+++.||.||+|+++|.+
T Consensus 401 ~~d~~-g~~~~~~~~g--~~Gel~v~gp~v~~GY~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~ 477 (632)
T PRK07529 401 ILDDA-GRYLRDCAVD--EVGVLCIAGPNVFSGYLEAAHNKGLWLEDGWLNTGDLGRIDADGYFWLTGRAKDLIIRGGHN 477 (632)
T ss_pred EcCCC-CcccccCCCC--CceEEEEECCCccccccCCccccccccCCCceEcCcEEEEcCCceEEEEecccCEEEeCCEE
Confidence 544 5 677777 78999999999999999876544433468999999999999999999999999999999999
Q ss_pred echHHHHHHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCC-CCcCCceEEecc-CC
Q 008342 463 ISSVEVEKVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMP-SYWVPKSVVFAA-LP 540 (569)
Q Consensus 463 v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~-~~~~p~~i~~~~-lP 540 (569)
|+|.+||+.|.+||.|.+++|++.+++..|+.++++|++.++... ..+++.++++++++ .+++|..+.+++ ||
T Consensus 478 i~p~eIE~~l~~~p~V~~a~vvg~~d~~~ge~~~a~v~l~~~~~~-----~~~~l~~~~~~~l~~~~~~P~~i~~v~~lP 552 (632)
T PRK07529 478 IDPAAIEEALLRHPAVALAAAVGRPDAHAGELPVAYVQLKPGASA-----TEAELLAFARDHIAERAAVPKHVRILDALP 552 (632)
T ss_pred ECHHHHHHHHHhCCCeeEEEEEeccCCCCCceeEEEEEEcCCCCC-----CHHHHHHHHHHhcchhccCCcEEEEecCCC
Confidence 999999999999999999999999999889999999998876544 45789999999987 479999999877 99
Q ss_pred CCCCCcccHHHHHHHHHhcCCc
Q 008342 541 KSATGKIQKHLLRAKAKEMGPV 562 (569)
Q Consensus 541 ~t~~GKi~r~~l~~~~~~~~~~ 562 (569)
+|++||++|++|++.+.+....
T Consensus 553 ~t~~GKi~r~~Lr~~~~~~~~~ 574 (632)
T PRK07529 553 KTAVGKIFKPALRRDAIRRVLR 574 (632)
T ss_pred CCCCCcccHHHHHHHHHHHHHH
Confidence 9999999999999988765443
No 14
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=7.4e-70 Score=584.71 Aligned_cols=521 Identities=21% Similarity=0.226 Sum_probs=406.0
Q ss_pred cccccCHHHHHHHhhhhCCCceeeee---CC------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHH
Q 008342 16 NYTALTPLWFINRAATLHPTRKSVVY---GS------KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEA 86 (569)
Q Consensus 16 ~~~~~~l~~~l~~~a~~~p~~~a~~~---~~------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~ 86 (569)
.....|++++++++++++|+++|+.+ .+ +.+||+||.++++++|++|.++|+++||+|+|+++|+++|+++
T Consensus 40 ~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~ 119 (651)
T PLN02736 40 HPEIGTLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIV 119 (651)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHH
Confidence 34456899999999999999999943 11 4699999999999999999999999999999999999999999
Q ss_pred HHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHH
Q 008342 87 QFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEY 166 (569)
Q Consensus 87 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 166 (569)
++||+++|++++|+++.++.+++.+++++++++++|++.+....+......++ ....++.+++..........
T Consensus 120 ~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~-------~l~~ii~~~~~~~~~~~~~~ 192 (651)
T PLN02736 120 DHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIP-------SVRLIVVVGGADEPLPSLPS 192 (651)
T ss_pred HHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCC-------CceEEEEECCCchhhhhhhc
Confidence 99999999999999999999999999999999999999876655544433332 34455555432111000000
Q ss_pred hhhcchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCcc
Q 008342 167 ALARGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMF 246 (569)
Q Consensus 167 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~ 246 (569)
.......+|++++..............++++++|+|||||||.||+|++||+++..........+++.++|++++.+|++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~~~~~~d~~l~~lPl~ 272 (651)
T PLN02736 193 GTGVEIVTYSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTKFYPSDVHISYLPLA 272 (651)
T ss_pred cCCcEEEEHHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhccCCCCCCEEEEeCCHH
Confidence 01112356777665433222112235678999999999999999999999999999888888888899999999999999
Q ss_pred chhhHHHHHHHHHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCC------------------------
Q 008342 247 HGNGWSYTWSLAALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASP------------------------ 302 (569)
Q Consensus 247 ~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~------------------------ 302 (569)
|.+++...+.++..|+++++.. .++..+++.|+++++|++.++|.+++.+.+...
T Consensus 273 h~~~~~~~~~~l~~G~~i~~~~-~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (651)
T PLN02736 273 HIYERVNQIVMLHYGVAVGFYQ-GDNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQA 351 (651)
T ss_pred HHHHHHHHHHHHHcCCEEEEeC-CCHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 9999987776666777766554 478899999999999999999999988765310
Q ss_pred ----CCCCC------------Cc-ccceeeeecCCCCCHHHHHHhh-hcCCeEecccccccCCCCccccccCCCCCCCCc
Q 008342 303 ----EDTIL------------PL-TNVVNVNTAGAPPPPSLLFAMS-QKGFRITHTYGLTELTGPASVCAWKPEWDSLPF 364 (569)
Q Consensus 303 ----~~~~~------------~l-~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~ 364 (569)
..... .+ +++|.+++||+++++++.+++. .+|+++++.||+||+++.++.....
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g~~~~~~YG~TE~~~~~~~~~~~-------- 423 (651)
T PLN02736 352 LENGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFGGRVLEGYGMTETSCVISGMDEG-------- 423 (651)
T ss_pred HHcCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhCCCeEEEechHHhchheeccCCC--------
Confidence 00000 01 4799999999999999999988 4599999999999998665543211
Q ss_pred hhhhhccccCCceeeccCCceeeeCCCCcccCCC-CCceEEEEEecCcccccccCCcchhhhhh-cCCeeecCceeEEcC
Q 008342 365 ETQARLNARQGVRTICLDGLDVIDARTNQPVPAD-GKTIGEIVMRGSCVMKGYLKNPKANEEAF-ANGWFHSGDLAVKHP 442 (569)
Q Consensus 365 ~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~-~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~tGD~~~~~~ 442 (569)
....+++|.|.+++ +++|+|.+++.....+ ....|||+++|++++.|||++++.+.+.| .+|||+|||+|++++
T Consensus 424 ---~~~~~~vG~p~pg~-~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~~d~ 499 (651)
T PLN02736 424 ---DNLSGHVGSPNPAC-EVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGLWLP 499 (651)
T ss_pred ---CCCCCccCCccCce-EEEEEEccccCcccCCCCCCCceEEecCCccccccccCHHHHHhhhccCCCeeccceEEEcC
Confidence 12347899999999 6999985433211111 01369999999999999999999999988 489999999999999
Q ss_pred CCeEEEecccCceEEe-CceeechHHHHHHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCc----------chhhh-
Q 008342 443 DNYIEIKDRLKDVIIS-GGENISSVEVEKVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEA----------DELDK- 510 (569)
Q Consensus 443 ~g~l~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~----------~~~~~- 510 (569)
||+++|+||.+|+|++ +|++|+|.+||.+|.+||.|.+|+|++. ..++.++|+|++.++. ...+.
T Consensus 500 dG~l~i~GR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~---~~~~~~~A~vv~~~~~~~~~~~~~~~~~~~~~ 576 (651)
T PLN02736 500 GGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVYGD---SLNSSLVAVVVVDPEVLKAWAASEGIKYEDLK 576 (651)
T ss_pred CCcEEEEEechhheEcCCCcEechHHHHHHHhcCCCeeEEEEEec---CCCceeEEEEEeCHHHHHHHHHHcCCCccCHH
Confidence 9999999999999995 7999999999999999999999999983 2467899999987531 10000
Q ss_pred -----hhHHHHHHHHHH-----hcCCCCcCCceEEecc-CC------CCCCCcccHHHHHHHHHhc
Q 008342 511 -----GKLAEDVSKFCR-----AKMPSYWVPKSVVFAA-LP------KSATGKIQKHLLRAKAKEM 559 (569)
Q Consensus 511 -----~~~~~~l~~~~~-----~~l~~~~~p~~i~~~~-lP------~t~~GKi~r~~l~~~~~~~ 559 (569)
....+.+.+.++ ..|+.|++|+.+.+.+ .| +|++||++|+.+++.|.++
T Consensus 577 ~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lT~~~Ki~R~~i~~~~~~~ 642 (651)
T PLN02736 577 QLCNDPRVRAAVLADMDAVGREAQLRGFEFAKAVTLVPEPFTVENGLLTPTFKVKRPQAKAYFAKA 642 (651)
T ss_pred HHhcCHHHHHHHHHHHHHHHHhcCCCcceeeeEEEEeCCCCcCCCCcCChhhhhhHHHHHHHHHHH
Confidence 001122222222 2599999999999877 54 7999999999999998764
No 15
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=1.6e-68 Score=564.96 Aligned_cols=508 Identities=30% Similarity=0.440 Sum_probs=423.0
Q ss_pred cccccccccCHHHHHHHhhhhCCCceeeeeCC------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHH
Q 008342 12 KISANYTALTPLWFINRAATLHPTRKSVVYGS------KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYE 85 (569)
Q Consensus 12 ~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~ 85 (569)
-....|.+.++.++|++.++.+|+++|+++.+ +.+||.||.++++++|++|.+.|+++||+|+++++|++++++
T Consensus 16 ~~~~~~~~~~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~ 95 (547)
T PRK13295 16 IAAGHWHDRTINDDLDACVASCPDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTV 95 (547)
T ss_pred hcCCCCcCCCHHHHHHHHHHHCCCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHH
Confidence 34456778899999999999999999999876 899999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccch-----HHHHHHHHHHhhhcCCCCCcCeEEEecCCCcc
Q 008342 86 AQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFF-----SLAEEALKMMEANSEGKLKTPHLIVIGDESCD 160 (569)
Q Consensus 86 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 160 (569)
++|||+++|++++|++|.++.+++.++++.+++++++++++.. ..+.+...... ....++.++....
T Consensus 96 ~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~- 167 (547)
T PRK13295 96 LYLACSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELP-------ALRHVVVVGGDGA- 167 (547)
T ss_pred HHHHHHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCC-------CcceEEEecCCCc-
Confidence 9999999999999999999999999999999999999987642 11222211111 2344555443211
Q ss_pred hhhhHHhhhcchhhHHhhhhcC-----CC--CCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCC
Q 008342 161 SKQLEYALARGAIEYEKFLETG-----DP--EFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGM 233 (569)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~-----~~--~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~ 233 (569)
.++.+++... .. ..........+++++++|||||||.||+|.++|.++..........+++
T Consensus 168 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~ 235 (547)
T PRK13295 168 ------------DSFEALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLGL 235 (547)
T ss_pred ------------cCHHHHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhCC
Confidence 2233333211 00 0111122456899999999999999999999999998888887778899
Q ss_pred CCCcEEEEcCCccchhhHHH-HHHHHHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccc
Q 008342 234 NEGAVFLWTLPMFHGNGWSY-TWSLAALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNV 312 (569)
Q Consensus 234 ~~~d~~~~~~p~~~~~g~~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l 312 (569)
.+++++++..|++|.+|+.. .+..+..|+++++.+.+++..+++.++++++|++.++|.++..+.......... ++++
T Consensus 236 ~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~-~~~l 314 (547)
T PRK13295 236 GADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRP-VSSL 314 (547)
T ss_pred CCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCC-cccc
Confidence 99999999999999998765 444556677777777789999999999999999999999999998776544444 8899
Q ss_pred eeeeecCCCCCHHHHHHhhh-cCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCC
Q 008342 313 VNVNTAGAPPPPSLLFAMSQ-KGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDART 391 (569)
Q Consensus 313 ~~~~~~g~~l~~~~~~~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~ 391 (569)
|.+++||+++++++.+++.+ +++++++.||+||++.+++.+.... ......++|.|.+++ .++|+|++
T Consensus 315 ~~~~~~G~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~---------~~~~~~~~G~~~~~~-~v~i~d~~- 383 (547)
T PRK13295 315 RTFLCAGAPIPGALVERARAALGAKIVSAWGMTENGAVTLTKLDDP---------DERASTTDGCPLPGV-EVRVVDAD- 383 (547)
T ss_pred eEEEEecCCCCHHHHHHHHHHhCCCeEEeccCCCCCCeeeccCCCc---------chhccCccccccCCc-EEEEECCC-
Confidence 99999999999999999874 5999999999999986554432111 111235789999999 69999976
Q ss_pred CcccCCCCCceEEEEEecCcccccccCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHH
Q 008342 392 NQPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKV 471 (569)
Q Consensus 392 ~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~ 471 (569)
+++++.| +.|||+++|+.++.||+++++.+... .+|||+|||+|+++++|++++.||.+|+++++|.+|+|.+||++
T Consensus 384 ~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~-~~g~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~~IE~~ 460 (547)
T PRK13295 384 GAPLPAG--QIGRLQVRGCSNFGGYLKRPQLNGTD-ADGWFDTGDLARIDADGYIRISGRSKDVIIRGGENIPVVEIEAL 460 (547)
T ss_pred CCCCCCC--CCCeEEEEcCcccccccCCccccccC-CCCCeecceEEEEcCCceEEEEeccCCeEEECCEEECHHHHHHH
Confidence 8888887 78999999999999999998887766 68899999999999999999999999999999999999999999
Q ss_pred HhcCCCceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHh-cCCCCcCCceEEecc-CCCCCCCcccH
Q 008342 472 LYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRA-KMPSYWVPKSVVFAA-LPKSATGKIQK 549 (569)
Q Consensus 472 l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~-~l~~~~~p~~i~~~~-lP~t~~GKi~r 549 (569)
|.+++.|.+++|++.+++..|+.+++++++.++... ..+++.+++++ .++.|++|..+.+++ ||+|++||++|
T Consensus 461 l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~-----~~~~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~sgK~~r 535 (547)
T PRK13295 461 LYRHPAIAQVAIVAYPDERLGERACAFVVPRPGQSL-----DFEEMVEFLKAQKVAKQYIPERLVVRDALPRTPSGKIQK 535 (547)
T ss_pred HHhCCCeeeEEEEeeecCCCCcEEEEEEEeCCCCCC-----CHHHHHHHHHhccCccccCCcEEEEeccCCCCCCccccH
Confidence 999999999999999988888999999998765432 45688889986 799999999999877 99999999999
Q ss_pred HHHHHHHHhc
Q 008342 550 HLLRAKAKEM 559 (569)
Q Consensus 550 ~~l~~~~~~~ 559 (569)
++|++++++.
T Consensus 536 ~~L~~~~~~~ 545 (547)
T PRK13295 536 FRLREMLRGE 545 (547)
T ss_pred HHHHHHHhcC
Confidence 9999988764
No 16
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.4e-68 Score=563.27 Aligned_cols=540 Identities=56% Similarity=0.982 Sum_probs=442.9
Q ss_pred CCccccccccccccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHH
Q 008342 7 IDDLPKISANYTALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEA 86 (569)
Q Consensus 7 ~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~ 86 (569)
+..+....+..-++++.++|++.++.+|+++|+.+.+..+||+||.+++.++|.+|.+.|+++||+|+++++|+++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~ 84 (545)
T PRK08162 5 EQGLDRNAANYVPLTPLSFLERAAEVYPDRPAVIHGDRRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEA 84 (545)
T ss_pred hcccCccccccccCCHHHHHHHHHHHCCCCeEEEECCeEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHH
Confidence 33444445556678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHH
Q 008342 87 QFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEY 166 (569)
Q Consensus 87 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 166 (569)
+|||+++|++++|++++++.+++..+++.++++.++++.+..+.+.+.....+ ..+.+.+........ .
T Consensus 85 ~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~---~ 153 (545)
T PRK08162 85 HFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLP--------GPKPLVIDVDDPEYP---G 153 (545)
T ss_pred HHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCC--------CCceEEEecCccccc---c
Confidence 99999999999999999999999999999999999999987766655433222 122222322111000 0
Q ss_pred hhhcchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCcc
Q 008342 167 ALARGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMF 246 (569)
Q Consensus 167 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~ 246 (569)
....+..++++++....+......+...+++++++|||||||.||+|+++|+++..........+.+..++++++.+|++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~ 233 (545)
T PRK08162 154 GRFIGALDYEAFLASGDPDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWGMPKHPVYLWTLPMF 233 (545)
T ss_pred CCCcccccHHHHhccCCccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeeEeccCcH
Confidence 01112345666665543333322234556899999999999999999999999877766666677888899999999999
Q ss_pred chhhHHHHHHHHHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHH
Q 008342 247 HGNGWSYTWSLAALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSL 326 (569)
Q Consensus 247 ~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~ 326 (569)
|.+++...+...+.+++.++...+++..+++.++++++|++.++|+++..|++........ +.+.+.++++|+.+++++
T Consensus 234 h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~~~~~~~~g~~~~~~~ 312 (545)
T PRK08162 234 HCNGWCFPWTVAARAGTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAG-IDHPVHAMVAGAAPPAAV 312 (545)
T ss_pred hhhhHHHHHHHHHHccEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccC-CccceEEEECCCCCCHHH
Confidence 9999887777777888888888899999999999999999999999999999765443333 566777889999999999
Q ss_pred HHHhhhcCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEE
Q 008342 327 LFAMSQKGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIV 406 (569)
Q Consensus 327 ~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~ 406 (569)
.+.+.+.++++++.||+||+++.+..+...+.+...+.........+.|.+.+..+.++++|++++.+++.++++.|||+
T Consensus 313 ~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~ 392 (545)
T PRK08162 313 IAKMEEIGFDLTHVYGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIM 392 (545)
T ss_pred HHHHHHhCCceeecccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEE
Confidence 99988779999999999999766666544333333222222223356677766554688999877888887544679999
Q ss_pred EecCcccccccCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEee
Q 008342 407 MRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVAR 486 (569)
Q Consensus 407 v~~~~~~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~ 486 (569)
++|+.++.||+++++.+...|.+|||+|||+++++++|.+++.||.||+++++|.+|+|.+||..|.++|.|.+++|++.
T Consensus 393 v~g~~~~~gY~~~~~~~~~~~~~g~~~TGDl~~~d~dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~ 472 (545)
T PRK08162 393 FRGNIVMKGYLKNPKATEEAFAGGWFHTGDLAVLHPDGYIKIKDRSKDIIISGGENISSIEVEDVLYRHPAVLVAAVVAK 472 (545)
T ss_pred EecCcchhhhcCChhhhHHHhhCCCcccCceEEEcCCccEEEEecccceEEeCCEEECHHHHHHHHHhCCcccEEEEEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEeccCCCCCCCcccHHHHHHHHHhcCCcc
Q 008342 487 PDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAALPKSATGKIQKHLLRAKAKEMGPVK 563 (569)
Q Consensus 487 ~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~lP~t~~GKi~r~~l~~~~~~~~~~~ 563 (569)
+++..++.+.+++++.++... ..+++.+++++.|+.|++|..+.+.+||+|++||++|+.|++++.++...+
T Consensus 473 ~~~~~~~~~~~~v~~~~~~~~-----~~~~l~~~~~~~l~~~~~P~~~~~~~iP~t~~gK~~r~~l~~~~~~l~~~~ 544 (545)
T PRK08162 473 PDPKWGEVPCAFVELKDGASA-----TEEEIIAHCREHLAGFKVPKAVVFGELPKTSTGKIQKFVLREQAKSLKAID 544 (545)
T ss_pred eccccCceEEEEEEeCCCCCC-----CHHHHHHHHHHhcccccCCcEEEecccCCCCCcCCcHHHHHHHHhhhhhhc
Confidence 888878889999988766443 457899999999999999999887779999999999999999988765543
No 17
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=1.7e-68 Score=573.25 Aligned_cols=513 Identities=23% Similarity=0.343 Sum_probs=412.5
Q ss_pred CHHHHHHHhhhhCCCceeeeeCC------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcC
Q 008342 21 TPLWFINRAATLHPTRKSVVYGS------KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAG 94 (569)
Q Consensus 21 ~l~~~l~~~a~~~p~~~a~~~~~------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 94 (569)
...++|+++++.+|+++|+++.+ +++||+||.+++.++|++|.++|+++||+|+++++|++++++++|||+++|
T Consensus 58 ~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G 137 (625)
T TIGR02188 58 VSYNCVDRHLEARPDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACARIG 137 (625)
T ss_pred HHHHHHHHhhccCCCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhC
Confidence 45678888888999999998743 589999999999999999999999999999999999999999999999999
Q ss_pred ceEeeccccCCHHHHHHHHhcCCceEEEEcccch---------HHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhH
Q 008342 95 AVLNSINIRLNATVVAFILSHASSAVVIVDQEFF---------SLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLE 165 (569)
Q Consensus 95 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 165 (569)
++++|+++.++.+++.+++++++++++|+++... ..+.++....+. ...+++.++.......
T Consensus 138 av~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~--- 208 (625)
T TIGR02188 138 AIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPV------SVEHVLVVRRTGNPVP--- 208 (625)
T ss_pred CEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCC------CccEEEEEcCCCCCcC---
Confidence 9999999999999999999999999999987532 222222222110 1234555443211100
Q ss_pred HhhhcchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHH-hHhHhCCCCCcEEEEcCC
Q 008342 166 YALARGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLN-GALIWGMNEGAVFLWTLP 244 (569)
Q Consensus 166 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~-~~~~~~~~~~d~~~~~~p 244 (569)
........|++++........ .....++++++|+|||||||.||+|+++|.+++..... ....++++++|++++..|
T Consensus 209 -~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 286 (625)
T TIGR02188 209 -WVEGRDVWWHDLMAKASAYCE-PEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFWCTAD 286 (625)
T ss_pred -ccccccccHHHHHhhcCCCCC-ceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEEECCC
Confidence 001112345666544322221 22356789999999999999999999999997655433 344568899999999999
Q ss_pred ccchhhHHH-HHHHHHhcceEEEecc----CChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCC-CCCcccceeeeec
Q 008342 245 MFHGNGWSY-TWSLAALCGTSICLRQ----VTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDT-ILPLTNVVNVNTA 318 (569)
Q Consensus 245 ~~~~~g~~~-~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~-~~~l~~l~~~~~~ 318 (569)
++|..+..+ .+..+..|+++++... +++..+++.|+++++|++.++|++++.|.+...... ...+++||.++++
T Consensus 287 ~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~ 366 (625)
T TIGR02188 287 VGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGSV 366 (625)
T ss_pred chhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEe
Confidence 999988765 4445556777766642 478999999999999999999999999987653321 1227899999999
Q ss_pred CCCCCHHHHHHhhhc----CCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcc
Q 008342 319 GAPPPPSLLFAMSQK----GFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQP 394 (569)
Q Consensus 319 g~~l~~~~~~~~~~~----~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~ 394 (569)
|+++++++.+++.+. ++++++.||+||+++.++..... ......+++|.|.+++ +++|+|++ |++
T Consensus 367 G~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~---------~~~~~~~~~G~p~~g~-~~~i~d~~-g~~ 435 (625)
T TIGR02188 367 GEPINPEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLPG---------ATPTKPGSATLPFFGI-EPAVVDEE-GNP 435 (625)
T ss_pred cCCCCHHHHHHHHHHcCCCCCceEecccccccCCceeecCCC---------CCCcCCCcccCCcCCc-eEEEECCC-CCC
Confidence 999999999888743 37899999999998765443211 0112347899999999 69999965 888
Q ss_pred cC-CCCCceEEEEEec--CcccccccCCcchhhhhh---cCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHH
Q 008342 395 VP-ADGKTIGEIVMRG--SCVMKGYLKNPKANEEAF---ANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEV 468 (569)
Q Consensus 395 ~~-~~~~~~Gel~v~~--~~~~~gy~~~~~~~~~~~---~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~i 468 (569)
++ .+ +.|||++++ ++++.|||++++.+...+ .+|||+|||+++++++|+++++||.||+|+++|++|+|.+|
T Consensus 436 ~~~~g--~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eI 513 (625)
T TIGR02188 436 VEGPG--EGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARRDKDGYIWITGRVDDVINVSGHRLGTAEI 513 (625)
T ss_pred CCCCC--CeEEEEEccCCCcccccccCChHHHHHHHhccCCCEEECCceEEEcCCCcEEEEecccCEEEeCCEEECHHHH
Confidence 87 66 789999999 589999999998776655 37899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcc
Q 008342 469 EKVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKI 547 (569)
Q Consensus 469 E~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi 547 (569)
|++|.+||.|.+++|++.+++..|+.+++++++.++.... ....++|+++++++|+.+++|+.+.+++ ||+|++||+
T Consensus 514 E~~l~~~p~V~e~~vvg~~~~~~g~~~~a~vv~~~~~~~~--~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sGKi 591 (625)
T TIGR02188 514 ESALVSHPAVAEAAVVGIPDDIKGQAIYAFVTLKDGYEPD--DELRKELRKHVRKEIGPIAKPDKIRFVPGLPKTRSGKI 591 (625)
T ss_pred HHHHHhCCCcceEEEEeeEcCCCCeEEEEEEEeCCCCCCC--HHHHHHHHHHHHhhcCCCccCcEEEECCCCCCCCCccc
Confidence 9999999999999999999998899999999988765421 1256789999999999999999998777 999999999
Q ss_pred cHHHHHHHHHhc
Q 008342 548 QKHLLRAKAKEM 559 (569)
Q Consensus 548 ~r~~l~~~~~~~ 559 (569)
+|+.|++++...
T Consensus 592 ~r~~l~~~~~~~ 603 (625)
T TIGR02188 592 MRRLLRKIAAGE 603 (625)
T ss_pred hHHHHHHHHcCC
Confidence 999999997754
No 18
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=3.4e-69 Score=577.60 Aligned_cols=517 Identities=19% Similarity=0.217 Sum_probs=395.6
Q ss_pred cCHHHHHHHhhhhCCCceeeeeC----C-----eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHh
Q 008342 20 LTPLWFINRAATLHPTRKSVVYG----S-----KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGA 90 (569)
Q Consensus 20 ~~l~~~l~~~a~~~p~~~a~~~~----~-----~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~ 90 (569)
.|+.++|+++++++|+++|+.+. + ..+||+||.++++++|++|.++|+++||+|+|+++|+++|++++|||
T Consensus 45 ~t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA~ 124 (666)
T PLN02614 45 DSCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEAC 124 (666)
T ss_pred CcHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 49999999999999999999742 1 34899999999999999999999999999999999999999999999
Q ss_pred hhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhc
Q 008342 91 PMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALAR 170 (569)
Q Consensus 91 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 170 (569)
+++|++++|+++.++.+++.+++++++++++|++.+....+. ..++.. ......++.+++..............
T Consensus 125 ~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~---~~~~~~---~~~l~~vi~~~~~~~~~~~~~~~~~~ 198 (666)
T PLN02614 125 NAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELF---KTCPNS---TEYMKTVVSFGGVSREQKEEAETFGL 198 (666)
T ss_pred HHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHH---Hhcccc---cccceEEEEeCCCChHHhhhhhhcCc
Confidence 999999999999999999999999999999999876433322 111100 00134566664321100000000011
Q ss_pred chhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHh-----CCCCCcEEEEcCCc
Q 008342 171 GAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIW-----GMNEGAVFLWTLPM 245 (569)
Q Consensus 171 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~-----~~~~~d~~~~~~p~ 245 (569)
...+|++++..............++++++|+|||||||.||||++||++++..+......+ ++.++|++++.+|+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl 278 (666)
T PLN02614 199 VIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPL 278 (666)
T ss_pred EEEEHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccH
Confidence 1345666665432211111224578999999999999999999999999988776554433 57789999999999
Q ss_pred cchhhHHHHHHHHHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCC----C-----------------
Q 008342 246 FHGNGWSYTWSLAALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPE----D----------------- 304 (569)
Q Consensus 246 ~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~----~----------------- 304 (569)
+|.+++......+..|+++++. .+++..+++.|++++||+++++|++++.+...... .
T Consensus 279 ~H~~~~~~~~~~l~~G~~v~~~-~~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 357 (666)
T PLN02614 279 AHIFDRVIEECFIQHGAAIGFW-RGDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFG 357 (666)
T ss_pred HHHHHHHHHHHHHHhCCEEEEe-CCCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 9999987655555667766555 46899999999999999999999999988642100 0
Q ss_pred ----------CCC------------Cc-ccceeeeecCCCCCHHHHHHhhhc-CCeEecccccccCCCCccccccCCCCC
Q 008342 305 ----------TIL------------PL-TNVVNVNTAGAPPPPSLLFAMSQK-GFRITHTYGLTELTGPASVCAWKPEWD 360 (569)
Q Consensus 305 ----------~~~------------~l-~~l~~~~~~g~~l~~~~~~~~~~~-~~~i~~~YG~tE~~~~~~~~~~~~~~~ 360 (569)
... .+ +++|.+++||+++++.+.+.+..+ ++++++.||+||+++..+.....
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~---- 433 (666)
T PLN02614 358 NMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHVESFLRVVACCHVLQGYGLTESCAGTFVSLPD---- 433 (666)
T ss_pred HHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHhcCCCEEeeCchHhhhhheeeeccc----
Confidence 000 01 589999999999998865544455 58999999999997644332211
Q ss_pred CCCchhhhhccccCCceeeccCCceeeeCC--CCcccCCCCCceEEEEEecCcccccccCCcchhhhhhcCCeeecCcee
Q 008342 361 SLPFETQARLNARQGVRTICLDGLDVIDAR--TNQPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLA 438 (569)
Q Consensus 361 ~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~--~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~tGD~~ 438 (569)
.....+++|.|++++ +++|+|.+ .+.+++.| +.|||+++|++++.|||++++.+.+.|.+|||+|||+|
T Consensus 434 ------~~~~~gsvG~p~pg~-evki~d~~~~~~~~~~~g--~~GEl~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg 504 (666)
T PLN02614 434 ------ELDMLGTVGPPVPNV-DIRLESVPEMEYDALAST--PRGEICIRGKTLFSGYYKREDLTKEVLIDGWLHTGDVG 504 (666)
T ss_pred ------cCCcCCcccCcCCce-EEEEeeecccCcccCCCC--CCceEEEcCCcccccccCCHHHhhhhhccCCcccceEE
Confidence 011247899999999 69999833 24667766 78999999999999999999999999999999999999
Q ss_pred EEcCCCeEEEecccCceEE-eCceeechHHHHHHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcch----------
Q 008342 439 VKHPDNYIEIKDRLKDVII-SGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADE---------- 507 (569)
Q Consensus 439 ~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~---------- 507 (569)
++|+||+++|+||.+|+|+ .+|++|+|.+||++|.+||.|.+++|++.+... .++|+|++....-.
T Consensus 505 ~~d~dG~l~i~gR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~~~V~g~~~~~---~l~alvv~~~~~~~~~~~~~~~~~ 581 (666)
T PLN02614 505 EWQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYGEVQAVDSVWVYGNSFES---FLVAIANPNQQILERWAAENGVSG 581 (666)
T ss_pred EEcCCCCEEEEEcchhceecCCCeeecHHHHHHHHhcCCCeeEEEEEecCCcc---eEEEEEeCCHHHHHHHHHhcCCCc
Confidence 9999999999999999999 579999999999999999999999999986432 38888887653110
Q ss_pred -----hhhhhHHHHHHHHH-----HhcCCCCcCCceEEeccCC-------CCCCCcccHHHHHHHHHhc
Q 008342 508 -----LDKGKLAEDVSKFC-----RAKMPSYWVPKSVVFAALP-------KSATGKIQKHLLRAKAKEM 559 (569)
Q Consensus 508 -----~~~~~~~~~l~~~~-----~~~l~~~~~p~~i~~~~lP-------~t~~GKi~r~~l~~~~~~~ 559 (569)
.......+.+.+.+ ++.|+.|.+++.+.+..-| +|+++|++|+.+.+.|.++
T Consensus 582 ~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~l~~~~f~~~ng~lTpt~K~kR~~i~~~y~~~ 650 (666)
T PLN02614 582 DYNALCQNEKAKEFILGELVKMAKEKKMKGFEIIKAIHLDPVPFDMERDLLTPTFKKKRPQLLKYYQSV 650 (666)
T ss_pred CHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCCcCCcCCHhhhhhHHHHHHHHHHH
Confidence 00111233333433 3569999999999876622 8999999999999998865
No 19
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.6e-68 Score=562.03 Aligned_cols=505 Identities=18% Similarity=0.200 Sum_probs=401.7
Q ss_pred ccccccccccccCHHHHHHHhhhhCCCceeeeeCC-eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHH
Q 008342 9 DLPKISANYTALTPLWFINRAATLHPTRKSVVYGS-KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQ 87 (569)
Q Consensus 9 ~~~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~-~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~ 87 (569)
..++.-..+...++.+.|.+.++++|+++|+.+.+ +++||+||.++++++|+.|.+ .+||+|+++++|++++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~---~~gd~Val~~~n~~e~~~~~ 84 (539)
T PRK06334 8 ARSKRGKLRSGKTVLESFLKLCSEMTTATVCWDEQLGKLSYNQVRKAVIALATKVSK---YPDQHIGIMMPASAGAYIAY 84 (539)
T ss_pred hhhhccccCcCCcHHHHHHHHHHhCCCceEEEeCCCCcccHHHHHHHHHHHHHHHhh---ccCCeEEEEcCCchHHHHHH
Confidence 34555566777899999999999999999998776 799999999999999999987 38999999999999999999
Q ss_pred HHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHh
Q 008342 88 FGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYA 167 (569)
Q Consensus 88 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 167 (569)
|||+++|++++|+++.++.+++.+++++++++++|++.+....+.+...... . ....++.+++....
T Consensus 85 lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~-----~-~~~~~i~~~~~~~~------- 151 (539)
T PRK06334 85 FATLLSGKIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDA-----E-YPFSLIYMEEVRKE------- 151 (539)
T ss_pred HHHHhcCCeeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccc-----c-ccccEEEEehhhhh-------
Confidence 9999999999999999999999999999999999998776544433221100 0 01233433321100
Q ss_pred hhcchhhHHhhhhc----CCCC-----CCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcE
Q 008342 168 LARGAIEYEKFLET----GDPE-----FAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAV 238 (569)
Q Consensus 168 ~~~~~~~~~~~l~~----~~~~-----~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~ 238 (569)
..+.+.+.. ..+. ........++++++|+|||||||.||+|.+||+++..........++++++|+
T Consensus 152 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~ 226 (539)
T PRK06334 152 -----LSFWEKCRIGIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSPKEDDV 226 (539)
T ss_pred -----ccHHHhhhhhhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCCCce
Confidence 000000000 0000 00012346789999999999999999999999999888777777788999999
Q ss_pred EEEcCCccchhhHHH-HHHHHHhcceEEEec-cCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeee
Q 008342 239 FLWTLPMFHGNGWSY-TWSLAALCGTSICLR-QVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVN 316 (569)
Q Consensus 239 ~~~~~p~~~~~g~~~-~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~ 316 (569)
+++.+|++|.+|+.. .+..+..|+++++.. .+++..+++.|+++++|++.++|++++.|++........ ++++|.++
T Consensus 227 ~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~lr~i~ 305 (539)
T PRK06334 227 MMSFLPPFHAYGFNSCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESC-LPSLRFVV 305 (539)
T ss_pred EEEecchHhhhhhHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccc-cccccEEE
Confidence 999999999999865 344556677766654 578999999999999999999999999998765444334 78999999
Q ss_pred ecCCCCCHHHHHHhhhc--CCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcc
Q 008342 317 TAGAPPPPSLLFAMSQK--GFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQP 394 (569)
Q Consensus 317 ~~g~~l~~~~~~~~~~~--~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~ 394 (569)
+||+++++++.+++.+. ++++++.||+||++.+++...... .....++|.|++++ +++|+|++++.+
T Consensus 306 ~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~----------~~~~~~vG~p~~g~-~v~i~d~~~~~~ 374 (539)
T PRK06334 306 IGGDAFKDSLYQEALKTFPHIQLRQGYGTTECSPVITINTVNS----------PKHESCVGMPIRGM-DVLIVSEETKVP 374 (539)
T ss_pred ECCccCCHHHHHHHHHHCCCCeEEecccccccCceEEeccCCC----------CCCCCcCceecCCC-EEEEEcCCCCcc
Confidence 99999999999999854 789999999999986655432110 11235789999999 699999888899
Q ss_pred cCCCCCceEEEEEecCcccccccCCcchhhhhh--cCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHH
Q 008342 395 VPADGKTIGEIVMRGSCVMKGYLKNPKANEEAF--ANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVL 472 (569)
Q Consensus 395 ~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~--~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l 472 (569)
++.| +.|||+++|++++.||+++++.+.... .+|||+|||+|+++++|.+++.||.+|+|+++|++|+|.|||++|
T Consensus 375 ~~~g--~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~eIE~~l 452 (539)
T PRK06334 375 VSSG--ETGLVLTRGTSLFSGYLGEDFGQGFVELGGETWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLEALESIL 452 (539)
T ss_pred CCCC--ceEEEEEecCcccccccCCcccccceeeCCceeEECCCEEEECCCCeEEEEeccCCeEEECCEEECHHHHHHHH
Confidence 9988 799999999999999999987644322 367999999999999999999999999999999999999999999
Q ss_pred hcCCCcee------eEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhc-CCCCcCCceEEecc-CCCCCC
Q 008342 473 YLHPLVLE------AAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAK-MPSYWVPKSVVFAA-LPKSAT 544 (569)
Q Consensus 473 ~~~~~v~~------~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~-l~~~~~p~~i~~~~-lP~t~~ 544 (569)
.+||+|.+ ++|++.++.. ..++++++.. . ..+++.++|++. ++.|++|+.+.+++ ||+|++
T Consensus 453 ~~~~~v~~~~~~~~~~v~~~~~~~--~~~~~~~~~~--~-------~~~~~~~~l~~~~~~~~~~P~~i~~v~~lP~t~~ 521 (539)
T PRK06334 453 MEGFGQNAADHAGPLVVCGLPGEK--VRLCLFTTFP--T-------SISEVNDILKNSKTSSILKISYHHQVESIPMLGT 521 (539)
T ss_pred HHccCCccccccCceEEEcCCCCc--eEEEEEEecc--C-------ChHHHHHHHHhcCCcccccchheeeecccccccC
Confidence 99999987 6777766432 2344444421 1 236788889886 78999999988777 999999
Q ss_pred CcccHHHHHHHHHhc
Q 008342 545 GKIQKHLLRAKAKEM 559 (569)
Q Consensus 545 GKi~r~~l~~~~~~~ 559 (569)
||++|+.|+++....
T Consensus 522 GKi~r~~L~~~~~~~ 536 (539)
T PRK06334 522 GKPDYCSLNALAKSL 536 (539)
T ss_pred CcccHHHHHHHHHHh
Confidence 999999999987653
No 20
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.3e-68 Score=560.72 Aligned_cols=492 Identities=26% Similarity=0.358 Sum_probs=413.2
Q ss_pred ccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEe
Q 008342 19 ALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLN 98 (569)
Q Consensus 19 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (569)
+.++.++|.++++++|+++|+++.++++||+||.++++++|++|.++|+++|++|+++++|+++++++++||+++|++++
T Consensus 42 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v 121 (537)
T PRK13382 42 GMGPTSGFAIAAQRCPDRPGLIDELGTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRIGADIL 121 (537)
T ss_pred cCCHHHHHHHHHHhCCCCeEEEeCCCeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHcCcEEE
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHhh
Q 008342 99 SINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEKF 178 (569)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (569)
|+++.++.+++.++++.++++++|++.+....+.......+ ....++.+.+.. ....++.+
T Consensus 122 pl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~------------~~~~~~~~ 182 (537)
T PRK13382 122 LLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCP-------QATRIVAWTDED------------HDLTVEVL 182 (537)
T ss_pred ecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhcc-------ccceEEEecCCc------------ccccHHHH
Confidence 99999999999999999999999999876655544322211 122233332211 01233333
Q ss_pred hhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHHHHHH
Q 008342 179 LETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTWSLA 258 (569)
Q Consensus 179 l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~ 258 (569)
....... ......++.++++|||||||.||+|.++|.+++.........+.+..+++++...|++|.+|+...+..+
T Consensus 183 ~~~~~~~---~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l 259 (537)
T PRK13382 183 IAAHAGQ---RPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTPWRAEEPTVIVAPMFHAWGFSQLVLAA 259 (537)
T ss_pred hhccCcC---CCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhCCCCCCeEEEecChHhhhHHHHHHHHH
Confidence 3322111 1123457889999999999999999999998888777777777888999999999999999997777777
Q ss_pred HhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCC-CCCCcccceeeeecCCCCCHHHHHHhhh-cCCe
Q 008342 259 ALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPED-TILPLTNVVNVNTAGAPPPPSLLFAMSQ-KGFR 336 (569)
Q Consensus 259 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-~~~~l~~l~~~~~~g~~l~~~~~~~~~~-~~~~ 336 (569)
..|+++++...+++..+++.|+++++|++.++|++++.|.+..... ....++++|.+++||+++++++.+.|.+ ++.+
T Consensus 260 ~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~ 339 (537)
T PRK13382 260 SLACTIVTRRRFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQFGDV 339 (537)
T ss_pred hcCcEEEECCCcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCCCHHHHHHHHHHcCCc
Confidence 7888877777889999999999999999999999999998764321 1112568999999999999999999985 5889
Q ss_pred EecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccccc
Q 008342 337 ITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGY 416 (569)
Q Consensus 337 i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy 416 (569)
+++.||+||++.+++.+... .....+++|.|++++ .++|+|++ +++++.| +.|||+++|++++.||
T Consensus 340 i~~~YG~TE~~~~~~~~~~~----------~~~~~~~vG~p~~~~-~~~i~d~~-~~~~~~g--~~GEl~v~g~~~~~gY 405 (537)
T PRK13382 340 IYNNYNATEAGMIATATPAD----------LRAAPDTAGRPAEGT-EIRILDQD-FREVPTG--EVGTIFVRNDTQFDGY 405 (537)
T ss_pred EEecccccccCcceecChhH----------hccCCCCccccCcCc-EEEEECCC-CCCCCCC--CeeEEEEEcCCcccCc
Confidence 99999999998765543211 112346899999999 69999986 8888877 7899999999999999
Q ss_pred cCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCCCCceee
Q 008342 417 LKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGESPC 496 (569)
Q Consensus 417 ~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~ 496 (569)
+ ++.+ ..|.+|||+|||+++++++|++++.||.||+|+.+|.+|+|.+||..|.++|+|.+++|++.+++..|+.+.
T Consensus 406 ~--~~~~-~~~~~g~~~TGDl~~~~~~g~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~ 482 (537)
T PRK13382 406 T--SGST-KDFHDGFMASGDVGYLDENGRLFVVGRDDEMIVSGGENVYPIEVEKTLATHPDVAEAAVIGVDDEQYGQRLA 482 (537)
T ss_pred c--ccch-hhccCCCEeeCceEEEeCCCcEEEeccccceeEECCEEECHHHHHHHHHhCCCEeeEEEEccCccccCCEEE
Confidence 8 3333 345689999999999999999999999999999999999999999999999999999999999988889999
Q ss_pred EEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHH
Q 008342 497 AFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRA 554 (569)
Q Consensus 497 ~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~ 554 (569)
+++++.++... ..+++++++++.|+.|++|..+.+++ ||+|++||++|++|++
T Consensus 483 a~vv~~~~~~~-----~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~gK~~r~~L~~ 536 (537)
T PRK13382 483 AFVVLKPGASA-----TPETLKQHVRDNLANYKVPRDIVVLDELPRGATGKILRRELQA 536 (537)
T ss_pred EEEEECCCCCC-----CHHHHHHHHHHhccCCCCCcEEEEeccCCCCCCCCCcHHhhCC
Confidence 99988765433 55789999999999999999999876 9999999999999864
No 21
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8e-68 Score=554.63 Aligned_cols=490 Identities=29% Similarity=0.444 Sum_probs=417.7
Q ss_pred CHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHh-cCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEee
Q 008342 21 TPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSK-LSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNS 99 (569)
Q Consensus 21 ~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~-~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 99 (569)
.+.+.|+++|+.+|+++|++++++.+||.||.++++++|++|.+ .|+++|++|+++++|+++++++++||+++|++++|
T Consensus 3 ~~~~~~~~~a~~~p~~~a~~~~~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~ 82 (496)
T PRK06839 3 GIAYWIEKRAYLHPDRIAIITEEEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVECIAVP 82 (496)
T ss_pred cHHHHHHHHHHHCCCCeEEEECCceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEe
Confidence 47889999999999999999999999999999999999999985 79999999999999999999999999999999999
Q ss_pred ccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHhhh
Q 008342 100 INIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEKFL 179 (569)
Q Consensus 100 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l 179 (569)
+++.++.+++..+++.+++++++++++....+....... ....++.+.+ +.++.
T Consensus 83 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~--------~~~~~~~~~~------------------~~~~~ 136 (496)
T PRK06839 83 LNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVS--------YVQRVISITS------------------LKEIE 136 (496)
T ss_pred cCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhcc--------CcceEEEecc------------------hHhhh
Confidence 999999999999999999999999887655443322111 1223333322 11221
Q ss_pred hcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHHH-HHH
Q 008342 180 ETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTW-SLA 258 (569)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~-~~~ 258 (569)
..... .......+++++++|||||||.||+|.++|.++..........+++..+|++++.+|++|.+|+.... ..+
T Consensus 137 ~~~~~---~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l 213 (496)
T PRK06839 137 DRKID---NFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTL 213 (496)
T ss_pred ccCCC---CCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcCCCCCCeEEEeeCCcchhhHHHHHHHHH
Confidence 11111 11224567899999999999999999999999887776666777889999999999999999986554 445
Q ss_pred HhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhhcCCeEe
Q 008342 259 ALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQKGFRIT 338 (569)
Q Consensus 259 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~~~~i~ 338 (569)
..|++.++...+++..+++.++++++|++.++|.+++.+.+........ ++++|.+++||+++++++.+.+.+.|++++
T Consensus 214 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~lr~~~~gG~~~~~~~~~~~~~~g~~~~ 292 (496)
T PRK06839 214 FAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETTN-LQSVRWFYNGGAPCPEELMREFIDRGFLFG 292 (496)
T ss_pred hcCcEEEEccCCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccccCC-CcccceEEECCCCCCHHHHHHHHHhCCeeE
Confidence 5677766667889999999999999999999999999999876554444 889999999999999999999987799999
Q ss_pred cccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccccccC
Q 008342 339 HTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGYLK 418 (569)
Q Consensus 339 ~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~ 418 (569)
+.||+||++..++.+.... .....+++|.|.+++ .++|+|++ ++.++.| +.|||+++|+.++.||++
T Consensus 293 ~~YG~tE~~~~~~~~~~~~---------~~~~~~~~G~p~~~~-~~~i~d~~-~~~~~~g--~~Gel~v~~~~~~~gy~~ 359 (496)
T PRK06839 293 QGFGMTETSPTVFMLSEED---------ARRKVGSIGKPVLFC-DYELIDEN-KNKVEVG--EVGELLIRGPNVMKEYWN 359 (496)
T ss_pred eeccCCCCCcceEeccccc---------ccccCCCCcccCCCc-eEEEECCC-cCCCCCC--CceEEEEECCCcchhhcC
Confidence 9999999987554432111 112347899999999 69999987 6668877 789999999999999999
Q ss_pred CcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCCCCceeeEE
Q 008342 419 NPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGESPCAF 498 (569)
Q Consensus 419 ~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~ 498 (569)
+++.+...+.+|||+|||+++++++|.+++.||.+|+|+.+|.+|+|.+||++|.++|+|.+++|++.+++..|+.++++
T Consensus 360 ~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~ 439 (496)
T PRK06839 360 RPDATEETIQDGWLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGEIPIAF 439 (496)
T ss_pred ChHHHHHHHcCCCeeecceEEEcCCCcEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEE
Confidence 99999988999999999999999999999999999999999999999999999999999999999999999989999999
Q ss_pred EEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHh
Q 008342 499 VTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKE 558 (569)
Q Consensus 499 v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~ 558 (569)
++..++... ..+++++++++.|+.+++|..+.+++ +|+|.+||++|++|+++.++
T Consensus 440 v~~~~~~~~-----~~~~l~~~~~~~l~~~~~P~~~~~v~~~P~t~~GKi~r~~l~~~~~~ 495 (496)
T PRK06839 440 IVKKSSSVL-----IEKDVIEHCRLFLAKYKIPKEIVFLKELPKNATGKIQKAQLVNQLKS 495 (496)
T ss_pred EEECCCCCC-----CHHHHHHHHHhhCcCCCCCcEEEEeccCCCCccccccHHHHHHHhhc
Confidence 998876543 45789999999999999999999777 99999999999999987654
No 22
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.9e-68 Score=568.92 Aligned_cols=510 Identities=24% Similarity=0.338 Sum_probs=410.7
Q ss_pred HHHHHHhhhhCCCceeeeeCC------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCce
Q 008342 23 LWFINRAATLHPTRKSVVYGS------KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAV 96 (569)
Q Consensus 23 ~~~l~~~a~~~p~~~a~~~~~------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 96 (569)
.++|+++++.+|+++|+++.+ +++||+||.+++.++|++|.+.|+++||+|+++++|++++++++|||+++|++
T Consensus 70 ~~~l~~~~~~~p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav 149 (637)
T PRK00174 70 YNCLDRHLKTRGDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACARIGAV 149 (637)
T ss_pred HHHHHHhhccCCCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCE
Confidence 577888999999999999743 47999999999999999999999999999999999999999999999999999
Q ss_pred EeeccccCCHHHHHHHHhcCCceEEEEcccch---------HHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHh
Q 008342 97 LNSINIRLNATVVAFILSHASSAVVIVDQEFF---------SLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYA 167 (569)
Q Consensus 97 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 167 (569)
++|+++.++.+++.+++++++++++|+++... ..+.......+ ....++.++...... .+
T Consensus 150 ~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-~~--- 218 (637)
T PRK00174 150 HSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCP-------SVEKVIVVRRTGGDV-DW--- 218 (637)
T ss_pred EEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCC-------CccEEEEEcCCCCCc-Cc---
Confidence 99999999999999999999999999976532 22222222222 234455544321100 00
Q ss_pred hhcchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHH-hHhHhCCCCCcEEEEcCCcc
Q 008342 168 LARGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLN-GALIWGMNEGAVFLWTLPMF 246 (569)
Q Consensus 168 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~-~~~~~~~~~~d~~~~~~p~~ 246 (569)
.......|++++........ ......+++++|+|||||||.||+|+++|.+++..... ....+++.++|++++..|++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 297 (637)
T PRK00174 219 VEGRDLWWHELVAGASDECE-PEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWCTADVG 297 (637)
T ss_pred CCCCcccHHHHHhhcCCCCC-ccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEEcCCch
Confidence 01122445565543322221 22346789999999999999999999999998655433 33456888999999999999
Q ss_pred chhhHHHHH-HHHHhcceEEEecc----CChHHHHHHHHhcCccEEeehHHHHHHHHccCCCC-CCCCcccceeeeecCC
Q 008342 247 HGNGWSYTW-SLAALCGTSICLRQ----VTAKAVYTAIATHGVTHFCAAPVVLNAIANASPED-TILPLTNVVNVNTAGA 320 (569)
Q Consensus 247 ~~~g~~~~~-~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-~~~~l~~l~~~~~~g~ 320 (569)
|..++.+.+ .+++.|+++++... +++..+++.|+++++|++.++|++++.|++..... ....+++||.++++|+
T Consensus 298 ~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~Ge 377 (637)
T PRK00174 298 WVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSVGE 377 (637)
T ss_pred HhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEEeCC
Confidence 999876544 44556777666542 47899999999999999999999999998865431 1122789999999999
Q ss_pred CCCHHHHHHhhhc-C---CeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccC
Q 008342 321 PPPPSLLFAMSQK-G---FRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVP 396 (569)
Q Consensus 321 ~l~~~~~~~~~~~-~---~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~ 396 (569)
++++++.+++.+. + +++++.||+||+++.++...... .....+++|.|++++ +++|+|++ +++++
T Consensus 378 ~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~---------~~~~~~~vG~p~~g~-~~~i~d~~-g~~~~ 446 (637)
T PRK00174 378 PINPEAWEWYYKVVGGERCPIVDTWWQTETGGIMITPLPGA---------TPLKPGSATRPLPGI-QPAVVDEE-GNPLE 446 (637)
T ss_pred CCCHHHHHHHHHHhCCCCCceEecccccccCCceEecCCCC---------CCcCCCcccCCCCCc-eEEEECCC-CCCCC
Confidence 9999999888743 3 78999999999987654322110 111236899999999 69999976 88888
Q ss_pred CCCCceEEEEEec--CcccccccCCcchhhhhh---cCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHH
Q 008342 397 ADGKTIGEIVMRG--SCVMKGYLKNPKANEEAF---ANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKV 471 (569)
Q Consensus 397 ~~~~~~Gel~v~~--~~~~~gy~~~~~~~~~~~---~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~ 471 (569)
.+ +.|||+++| ++++.|||++++.+...+ .+|||+|||+++++++|+++++||.||+|+++|++|+|.+||++
T Consensus 447 ~g--~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~ 524 (637)
T PRK00174 447 GG--EGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESA 524 (637)
T ss_pred CC--CcEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEcCCCcEEEEEecccEEEeCCEEECHHHHHHH
Confidence 77 789999999 689999999998776665 37899999999999999999999999999999999999999999
Q ss_pred HhcCCCceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHH
Q 008342 472 LYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKH 550 (569)
Q Consensus 472 l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~ 550 (569)
|.++|.|.+++|++.+++..|+.+++++++.++... .....++|+++++++|+.+++|..+.+++ ||+|++||++|+
T Consensus 525 l~~~~~V~~~~Vvg~~~~~~g~~~~a~vv~~~~~~~--~~~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GKi~R~ 602 (637)
T PRK00174 525 LVAHPKVAEAAVVGRPDDIKGQGIYAFVTLKGGEEP--SDELRKELRNWVRKEIGPIAKPDVIQFAPGLPKTRSGKIMRR 602 (637)
T ss_pred HHhCCCcceEEEEeeEcCCCCeEEEEEEEECCCCCC--CHHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCCCcchHHH
Confidence 999999999999999999889999999998876432 12246789999999999999999999877 999999999999
Q ss_pred HHHHHHHhc
Q 008342 551 LLRAKAKEM 559 (569)
Q Consensus 551 ~l~~~~~~~ 559 (569)
+|++.+...
T Consensus 603 ~L~~~~~~~ 611 (637)
T PRK00174 603 ILRKIAEGE 611 (637)
T ss_pred HHHHHHcCC
Confidence 999987654
No 23
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-67 Score=557.12 Aligned_cols=517 Identities=26% Similarity=0.402 Sum_probs=428.4
Q ss_pred ccccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCce
Q 008342 17 YTALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAV 96 (569)
Q Consensus 17 ~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 96 (569)
..++|+.+++.+.++++|+++|+.+.++++||+||.+++.++|..|.+.|+++|++|+++++|+++++++++||+++|++
T Consensus 4 ~~~~~~~~~~~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~ 83 (528)
T PRK07470 4 RRVMNLAHFLRQAARRFPDRIALVWGDRSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRLGAV 83 (528)
T ss_pred ccCCCHHHHHHHHHHHCCCceEEEECCccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhCCeE
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHH
Q 008342 97 LNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYE 176 (569)
Q Consensus 97 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 176 (569)
++++++.++.+++.++++.++++.++++++..+.......... ....++.++.... ...+.
T Consensus 84 ~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~------------~~~~~ 144 (528)
T PRK07470 84 WVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASP-------DLTHVVAIGGARA------------GLDYE 144 (528)
T ss_pred EEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCC-------cCceEEEeCCCcc------------cccHH
Confidence 9999999999999999999999999999876555443322221 2344555543211 13455
Q ss_pred hhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHh--CCCCCcEEEEcCCccchhhHHHH
Q 008342 177 KFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIW--GMNEGAVFLWTLPMFHGNGWSYT 254 (569)
Q Consensus 177 ~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~--~~~~~d~~~~~~p~~~~~g~~~~ 254 (569)
+++..............++++++|+|||||||.||+|.++|.++...+......+ +..++|+++..+|++|.+++...
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~ 224 (528)
T PRK07470 145 ALVARHLGARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIHQL 224 (528)
T ss_pred HHHhcCCCCCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHHHH
Confidence 5544322222222234668899999999999999999999999876554433322 56788999999999999998654
Q ss_pred HHHHHhcceEEEec--cCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhh-
Q 008342 255 WSLAALCGTSICLR--QVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMS- 331 (569)
Q Consensus 255 ~~~~~~g~~~~~~~--~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~- 331 (569)
+ ..+.|+++++.+ .+++..+++.|+++++|++.++|++++.+.+........ ++++|.+++||+++++....++.
T Consensus 225 ~-~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~lr~~~~gG~~l~~~~~~~~~~ 302 (528)
T PRK07470 225 C-QVARGAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYD-HSSLRYVIYAGAPMYRADQKRALA 302 (528)
T ss_pred H-HHhcCceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCC-CcceEEEEEcCCCCCHHHHHHHHH
Confidence 4 456677776664 578999999999999999999999999998876544444 78999999999999999988887
Q ss_pred hcCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCc
Q 008342 332 QKGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSC 411 (569)
Q Consensus 332 ~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~ 411 (569)
.++.++++.||+||+++.+..+..... . .........+++|.|.+++ .++++|++ +++++.+ +.|||+++|+.
T Consensus 303 ~~g~~~~~~YG~TE~~~~~~~~~~~~~-~--~~~~~~~~~~~~G~~~~g~-~~~i~d~~-~~~~~~g--~~Gel~i~~~~ 375 (528)
T PRK07470 303 KLGKVLVQYFGLGEVTGNITVLPPALH-D--AEDGPDARIGTCGFERTGM-EVQIQDDE-GRELPPG--ETGEICVIGPA 375 (528)
T ss_pred HhCcHHHHhCCCcccCCceeecchhhc-c--ccccccceeeccCcccCCc-EEEEECCC-CCCCCCC--CceEEEEeCCc
Confidence 458899999999999876654432100 0 0000122347889999999 69999975 8888877 78999999999
Q ss_pred ccccccCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCCC
Q 008342 412 VMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDERW 491 (569)
Q Consensus 412 ~~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~ 491 (569)
++.||+++++.+...|.+|||+|||+++++++|++++.||.||+++++|.+++|.+||..|.+++.|.+++|++.+++..
T Consensus 376 ~~~gy~~~~~~~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~ 455 (528)
T PRK07470 376 VFAGYYNNPEANAKAFRDGWFRTGDLGHLDARGFLYITGRASDMYISGGSNVYPREIEEKLLTHPAVSEVAVLGVPDPVW 455 (528)
T ss_pred cchhhcCCHHHHHhhhcCCcEecceeEEEccCCeEEEeCCccceEEeCCEEECHHHHHHHHHhCCCceEEEEEeccCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHhcCCccccc
Q 008342 492 GESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKEMGPVKMIK 566 (569)
Q Consensus 492 g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~~~~~~~ 566 (569)
|+.+.++++..++... +.+++.++|+++|+.+++|..+++.+ ||+|++||++|+.|++++.+....+.-+
T Consensus 456 ~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~l~~~~~~~~~~~~~~ 526 (528)
T PRK07470 456 GEVGVAVCVARDGAPV-----DEAELLAWLDGKVARYKLPKRFFFWDALPKSGYGKITKKMVREELEERGLLDLER 526 (528)
T ss_pred CceeEEEEEECCCCCC-----CHHHHHHHHHHhhhcCCCCcEEEEeccCCCCCcccccHHHHHHHHHhcccccccc
Confidence 8888888887765432 45789999999999999999988776 9999999999999999999888766543
No 24
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.3e-67 Score=556.91 Aligned_cols=517 Identities=35% Similarity=0.557 Sum_probs=446.3
Q ss_pred cccccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCc
Q 008342 16 NYTALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGA 95 (569)
Q Consensus 16 ~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 95 (569)
.+.+.++.++|.++++.+|+++|+.+.++.+||+||++++.++|+.|.+.|+++|++|+++++|+++++++++||+++|+
T Consensus 2 ~~~~~~l~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~~G~ 81 (521)
T PRK06187 2 QDYPLTIGRILRHGARKHPDKEAVYFDGRRTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVPKIGA 81 (521)
T ss_pred CcccCCHHHHHHHHHHHCCCceEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCe
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhH
Q 008342 96 VLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEY 175 (569)
Q Consensus 96 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 175 (569)
+++++++.++.+++..+++.+++++++++.+..+.+......++ ....++.+++.... ........+
T Consensus 82 ~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~------~~~~~~~~~ 148 (521)
T PRK06187 82 VLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLP-------TVRTVIVEGDGPAA------PLAPEVGEY 148 (521)
T ss_pred EEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccC-------CccEEEEecCcccc------ccccccccH
Confidence 99999999999999999999999999999987776665544333 23456655543311 011234556
Q ss_pred HhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHHH
Q 008342 176 EKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTW 255 (569)
Q Consensus 176 ~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~ 255 (569)
.+++........ ......+++++++|||||||.||+|.+||.++..........++++++|++++..|++|.+++...+
T Consensus 149 ~~~~~~~~~~~~-~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 227 (521)
T PRK06187 149 EELLAAASDTFD-FPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLKLSRDDVYLVIVPMFHVHAWGLPY 227 (521)
T ss_pred HHHhhcCCccCC-CCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhCCCCCCEEEEeCCchHHhhHHHHH
Confidence 666554433322 2234667899999999999999999999999998888888888999999999999999999998877
Q ss_pred HHHHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhhc-C
Q 008342 256 SLAALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQK-G 334 (569)
Q Consensus 256 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~-~ 334 (569)
.++..|+++++.+..++..+++.++++++|++.++|++++.+.......... ++++|.+++||+++++++.+.+.+. +
T Consensus 228 ~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~-~~~l~~v~~~Ge~l~~~~~~~~~~~~~ 306 (521)
T PRK06187 228 LALMAGAKQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVD-FSSLRLVIYGGAALPPALLREFKEKFG 306 (521)
T ss_pred HHHHhCCEEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccC-cchhhEEEEcCcCCCHHHHHHHHHHhC
Confidence 7778888888887789999999999999999999999999999887664444 8899999999999999999999865 9
Q ss_pred CeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccc
Q 008342 335 FRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMK 414 (569)
Q Consensus 335 ~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~ 414 (569)
+++++.||+||++++...+....... .......++|.|.+++ .++|+|++ +.+++.+.++.|||+++|+.+..
T Consensus 307 ~~v~~~YG~tE~~~~~~~~~~~~~~~-----~~~~~~~~~G~~~~~~-~~~i~~~~-~~~~~~~~g~~Gel~v~~~~~~~ 379 (521)
T PRK06187 307 IDLVQGYGMTETSPVVSVLPPEDQLP-----GQWTKRRSAGRPLPGV-EARIVDDD-GDELPPDGGEVGEIIVRGPWLMQ 379 (521)
T ss_pred cchheeeccCccCcccccCCcccccc-----cccccCCccccccCCe-EEEEECCC-CCCCCCCCCCeeEEEEECcchhh
Confidence 99999999999987766654322110 0112447899999999 69999987 78888833489999999999999
Q ss_pred cccCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCCCCce
Q 008342 415 GYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGES 494 (569)
Q Consensus 415 gy~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~ 494 (569)
||+++++.+...|.++||+|||+++++++|.+++.||.+|+++.+|.++++.+||++|.++++|.+++|++.+++..++.
T Consensus 380 ~y~~~~~~~~~~~~~~~~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~ 459 (521)
T PRK06187 380 GYWNRPEATAETIDGGWLHTGDVGYIDEDGYLYITDRIKDVIISGGENIYPRELEDALYGHPAVAEVAVIGVPDEKWGER 459 (521)
T ss_pred hhcCCHHHHHHHhhCCceeccceEEEcCCCCEEEeecccceEEcCCeEECHHHHHHHHHhCCCceEEEEEeccCCCcCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988888899
Q ss_pred eeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHhc
Q 008342 495 PCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKEM 559 (569)
Q Consensus 495 ~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~ 559 (569)
+.++++..++... ..+++.++++++++.+.+|..+.+++ ||+|++||++|+.|+++|.+.
T Consensus 460 ~~~~v~~~~~~~~-----~~~~l~~~l~~~l~~~~~p~~i~~v~~~P~t~~gK~~r~~l~~~~~~~ 520 (521)
T PRK06187 460 PVAVVVLKPGATL-----DAKELRAFLRGRLAKFKLPKRIAFVDELPRTSVGKILKRVLREQYAEG 520 (521)
T ss_pred EEEEEEECCCCCC-----CHHHHHHHHHHhccCCCCceEEEEccCCCCCCCCCeeHHHHHHHHhcC
Confidence 9999998776543 45789999999999999999998776 999999999999999998764
No 25
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9e-68 Score=562.86 Aligned_cols=517 Identities=26% Similarity=0.372 Sum_probs=425.7
Q ss_pred cccccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCc
Q 008342 16 NYTALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGA 95 (569)
Q Consensus 16 ~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 95 (569)
...++++.++++++++++|+++|+.+.++.+||.||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 28 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~ 107 (573)
T PRK05605 28 DYGDTTLVDLYDNAVARFGDRPALDFFGATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAVLRLGA 107 (573)
T ss_pred CCCcCCHHHHHHHHHHHCCCCeEEEeCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCc
Confidence 34457999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhh--h---------
Q 008342 96 VLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQ--L--------- 164 (569)
Q Consensus 96 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~--------- 164 (569)
+++|++|.++.+++.+++++++++++|+++............. ....++.++........ .
T Consensus 108 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~--------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 179 (573)
T PRK05605 108 VVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTT--------PLETIVSVNMIAAMPLLQRLALRLPIPAL 179 (573)
T ss_pred EEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhcc--------ccceeEeeecccccccccccccccccccc
Confidence 9999999999999999999999999999887655544432211 12233333211000000 0
Q ss_pred ------HHhhhcchhhHHhhhhcCCCCC---CCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhC-C-
Q 008342 165 ------EYALARGAIEYEKFLETGDPEF---AWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWG-M- 233 (569)
Q Consensus 165 ------~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~-~- 233 (569)
......+...|+++........ ........+++++++|||||||.||+|.+||++++.........+. +
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~ 259 (573)
T PRK05605 180 RKARAALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGLG 259 (573)
T ss_pred cccccccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccccC
Confidence 0001123455666554422110 1112345789999999999999999999999999877665443332 2
Q ss_pred CCCcEEEEcCCccchhhHHHHHH-HHHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccc
Q 008342 234 NEGAVFLWTLPMFHGNGWSYTWS-LAALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNV 312 (569)
Q Consensus 234 ~~~d~~~~~~p~~~~~g~~~~~~-~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l 312 (569)
..++++++..|++|.+|+...+. .+..|+++++.+.+++..+++.++++++|++.++|.+++.+.+........ ++++
T Consensus 260 ~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~l 338 (573)
T PRK05605 260 DGPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVD-LSGV 338 (573)
T ss_pred CCCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCC-chhc
Confidence 34789999999999999865444 456677777777889999999999999999999999999999876555444 7899
Q ss_pred eeeeecCCCCCHHHHHHhhh-cCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCC
Q 008342 313 VNVNTAGAPPPPSLLFAMSQ-KGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDART 391 (569)
Q Consensus 313 ~~~~~~g~~l~~~~~~~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~ 391 (569)
|.+++||+++++++.+++.+ .+.++++.||+||+++++..+.... ....+++|.|.+++ .++|+|+++
T Consensus 339 r~i~~gg~~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~----------~~~~~~~G~~~~~~-~~~i~d~~~ 407 (573)
T PRK05605 339 RNAFSGAMALPVSTVELWEKLTGGLLVEGYGLTETSPIIVGNPMSD----------DRRPGYVGVPFPDT-EVRIVDPED 407 (573)
T ss_pred cEEEECCCcCCHHHHHHHHHHhCCCeecccccchhchhhhcCCccc----------CCcCCccccCCCCC-EEEEEcCCC
Confidence 99999999999999999885 4899999999999987665543211 12236889999999 699999886
Q ss_pred -CcccCCCCCceEEEEEecCcccccccCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHH
Q 008342 392 -NQPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEK 470 (569)
Q Consensus 392 -~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~ 470 (569)
+.+++.+ +.|||+++|+.++.||++++..+...|.+|||+|||+++++++|.+++.||.||+++.+|.+|+|.+||+
T Consensus 408 ~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~~v~p~eIE~ 485 (573)
T PRK05605 408 PDETMPDG--EEGELLVRGPQVFKGYWNRPEETAKSFLDGWFRTGDVVVMEEDGFIRIVDRIKELIITGGFNVYPAEVEE 485 (573)
T ss_pred CCccCCCC--CeeEEEEecCchhhhhcCChhHhhhcccCCCcccCCEEEEcCCCcEEEEeccccceeeCCEEECHHHHHH
Confidence 6788877 7899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccH
Q 008342 471 VLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQK 549 (569)
Q Consensus 471 ~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r 549 (569)
++.+++.|.+++|++.+++..++.+++++++.++... ..++|.++++++|+.+++|..+++.+ ||+|++||++|
T Consensus 486 ~l~~~~~i~~~~v~~~~~~~~~~~~~~~vv~~~~~~~-----~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r 560 (573)
T PRK05605 486 VLREHPGVEDAAVVGLPREDGSEEVVAAVVLEPGAAL-----DPEGLRAYCREHLTRYKVPRRFYHVDELPRDQLGKVRR 560 (573)
T ss_pred HHHhCcccceEEEEeeecccCCeEEEEEEEECCCCCC-----CHHHHHHHHHHhCccccCCcEEEEeccCCCCCcccccH
Confidence 9999999999999999988888999999988776433 45789999999999999999998776 99999999999
Q ss_pred HHHHHHHHhc
Q 008342 550 HLLRAKAKEM 559 (569)
Q Consensus 550 ~~l~~~~~~~ 559 (569)
++|++++.+.
T Consensus 561 ~~L~~~~~~~ 570 (573)
T PRK05605 561 REVREELLEK 570 (573)
T ss_pred HHHHHHHHHH
Confidence 9999988654
No 26
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=1.6e-67 Score=555.68 Aligned_cols=510 Identities=25% Similarity=0.346 Sum_probs=424.9
Q ss_pred cccccccccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhh
Q 008342 12 KISANYTALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAP 91 (569)
Q Consensus 12 ~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~ 91 (569)
..+.+..+.++.++|+++++.+|+++|+++.++++||+||.+++.++|..|.+.|+++|++|+++++|++++++++|||+
T Consensus 13 ~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~ 92 (542)
T PRK06155 13 VDPLPPSERTLPAMLARQAERYPDRPLLVFGGTRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCA 92 (542)
T ss_pred cccCCccccCHHHHHHHHHHHCCCCeEEEeCCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHH
Confidence 34556678899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcc
Q 008342 92 MAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARG 171 (569)
Q Consensus 92 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 171 (569)
++|++++|+++.++.+++.++++++++++++++.+....+....... .....++.++..... . ...
T Consensus 93 ~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-~------~~~ 158 (542)
T PRK06155 93 WLGAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGD-------LPLPAVWLLDAPASV-S------VPA 158 (542)
T ss_pred HhCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhcccc-------cCcceEEEecCcccc-c------ccc
Confidence 99999999999999999999999999999999987665554322111 023445555432110 0 000
Q ss_pred hhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhH
Q 008342 172 AIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGW 251 (569)
Q Consensus 172 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~ 251 (569)
.....++.... .........++++++++|||||||.||+|.++|.++..........+++++++++++.+|++|..++
T Consensus 159 ~~~~~~~~~~~--~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~~~ 236 (542)
T PRK06155 159 GWSTAPLPPLD--APAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLEIGADDVLYTTLPLFHTNAL 236 (542)
T ss_pred ccchhhhcccC--CCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcCCCCCCEEEEecCHHHHHHH
Confidence 00000111000 1111123456889999999999999999999999998887777778899999999999999999999
Q ss_pred HHHHHHHHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhh
Q 008342 252 SYTWSLAALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMS 331 (569)
Q Consensus 252 ~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~ 331 (569)
...+..+..|+++++...+++..+++.|+++++|++.++|+++..|.+........ ..+++.++.+| +++.+.+.++
T Consensus 237 ~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~-~~~l~~~~~g~--~~~~~~~~~~ 313 (542)
T PRK06155 237 NAFFQALLAGATYVLEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDR-AHRVRVALGPG--VPAALHAAFR 313 (542)
T ss_pred HHHHHHHHcCceEEeeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccc-cCceEEEEEcC--CCHHHHHHHH
Confidence 87777788888888888889999999999999999999999999998876544443 67888777555 5788888887
Q ss_pred h-cCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecC
Q 008342 332 Q-KGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGS 410 (569)
Q Consensus 332 ~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~ 410 (569)
+ +++++++.||+||++.++..+.. ....+++|.+.+++ .++|+|++ +++++.+ +.|||+++|+
T Consensus 314 ~~~~~~v~~~YG~tE~~~~~~~~~~------------~~~~~~vG~~~~~~-~~~i~d~~-~~~~~~g--~~Gei~v~~~ 377 (542)
T PRK06155 314 ERFGVDLLDGYGSTETNFVIAVTHG------------SQRPGSMGRLAPGF-EARVVDEH-DQELPDG--EPGELLLRAD 377 (542)
T ss_pred HHcCCCEEeeecccccCccccCCCC------------CCCCCCcCccCCCc-eEEEECCC-CCCCCCC--CceEEEEecC
Confidence 4 59999999999999876654321 12236789999999 69999976 8888887 7899999998
Q ss_pred ---cccccccCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeec
Q 008342 411 ---CVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARP 487 (569)
Q Consensus 411 ---~~~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~ 487 (569)
.++.||+++++.+...|.++||+|||+|+++++|.+++.||.+|+|+++|.+++|.+||++|.++|+|.+++|++.+
T Consensus 378 ~~~~~~~GY~~~~~~~~~~~~~~~~~TGD~~~~~~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~v~ 457 (542)
T PRK06155 378 EPFAFATGYFGMPEKTVEAWRNLWFHTGDRVVRDADGWFRFVDRIKDAIRRRGENISSFEVEQVLLSHPAVAAAAVFPVP 457 (542)
T ss_pred CccccchhhcCCHHHHHHhhcCCcEeccceEEEcCCceEEEEecCCCEEEeCCEEECHHHHHHHHHhCCCeeEEEEEeec
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHhcCC
Q 008342 488 DERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKEMGP 561 (569)
Q Consensus 488 ~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~~ 561 (569)
++..++.+.+++++..+... +..++.++|+++++.+++|..+.+++ ||+|++||++|++|++++.+.+.
T Consensus 458 ~~~~~~~~~~~v~~~~~~~~-----~~~~~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~l~~~~~~~~~ 527 (542)
T PRK06155 458 SELGEDEVMAAVVLRDGTAL-----EPVALVRHCEPRLAYFAVPRYVEFVAALPKTENGKVQKFVLREQGVTADT 527 (542)
T ss_pred ccccCceEEEEEEECCCCCC-----CHHHHHHHHHhhCcCccCCcEEEEeccCCCCcccceeHHHHHhhccCCch
Confidence 88878888888887765443 55789999999999999999998777 99999999999999998765443
No 27
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.3e-68 Score=562.53 Aligned_cols=505 Identities=24% Similarity=0.385 Sum_probs=419.2
Q ss_pred cCHH-HHHHHhhh-hCCCceeeeeCC----eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhc
Q 008342 20 LTPL-WFINRAAT-LHPTRKSVVYGS----KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMA 93 (569)
Q Consensus 20 ~~l~-~~l~~~a~-~~p~~~a~~~~~----~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~ 93 (569)
+++. +++++++. .+|+++|+.+.+ +++||+||.+++.++|.+|.+.|+++||+|+++++|++++++++|||+++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~ 121 (570)
T PRK04319 42 VNIAYEAIDRHADGGRKDKVALRYLDASRKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELYFALLGALKN 121 (570)
T ss_pred eeHHHHHHHHhhccCCCCceEEEEECCCCceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 3444 68888877 579999998753 68999999999999999999999999999999999999999999999999
Q ss_pred CceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchh
Q 008342 94 GAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAI 173 (569)
Q Consensus 94 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 173 (569)
|++++|+++.++.+++.++++.++++++|++......... ..++ ....++.+++... ...+..
T Consensus 122 G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~--~~~~-------~~~~~~~~~~~~~--------~~~~~~ 184 (570)
T PRK04319 122 GAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPA--DDLP-------SLKHVLLVGEDVE--------EGPGTL 184 (570)
T ss_pred CcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccch--hcCC-------CceEEEEECCCcC--------CCcCcc
Confidence 9999999999999999999999999999998765433221 1111 2344555543221 112234
Q ss_pred hHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHH
Q 008342 174 EYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSY 253 (569)
Q Consensus 174 ~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~ 253 (569)
.+.+++........ .....++++++++|||||||.||+|.++|++++.........+++.++|++++..|++|.+|+..
T Consensus 185 ~~~~~~~~~~~~~~-~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~ 263 (570)
T PRK04319 185 DFNALMEQASDEFD-IEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLDLHEDDVYWCTADPGWVTGTSY 263 (570)
T ss_pred CHHHHHhhcCCcCC-ccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCCCceEEecCChHHhhCchH
Confidence 56666544332221 12345678999999999999999999999999888877777888999999999999999888754
Q ss_pred -HHHHHHhcceEEEec-cCChHHHHHHHHhcCccEEeehHHHHHHHHccCCC--CCCCCcccceeeeecCCCCCHHHHHH
Q 008342 254 -TWSLAALCGTSICLR-QVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPE--DTILPLTNVVNVNTAGAPPPPSLLFA 329 (569)
Q Consensus 254 -~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~--~~~~~l~~l~~~~~~g~~l~~~~~~~ 329 (569)
.+.++..|+++++.. .+++..+++.|+++++|++.++|++++.+.+.... .... ++++|.++++|+++++++.++
T Consensus 264 ~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~-~~~lr~~~~gG~~l~~~~~~~ 342 (570)
T PRK04319 264 GIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYD-LSSLRHILSVGEPLNPEVVRW 342 (570)
T ss_pred HHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCC-cccceEEEEcccCCCHHHHHH
Confidence 445556677766664 58899999999999999999999999999876432 1223 789999999999999999999
Q ss_pred hhh-cCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEe
Q 008342 330 MSQ-KGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMR 408 (569)
Q Consensus 330 ~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~ 408 (569)
+++ ++.++++.||+||+++.++..... .....+++|.|.+++ +++|+|++ +.+++.| +.|||+++
T Consensus 343 ~~~~~g~~i~~~YG~tE~~~~~~~~~~~----------~~~~~~~~G~p~~g~-~~~i~d~~-~~~~~~g--~~Gel~i~ 408 (570)
T PRK04319 343 GMKVFGLPIHDNWWMTETGGIMIANYPA----------MDIKPGSMGKPLPGI-EAAIVDDQ-GNELPPN--RMGNLAIK 408 (570)
T ss_pred HHHHhCCCeEeceeecccCCEEEecCCC----------CCCCCCcCcCCCCCC-EEEEECCC-CCCCCCC--CceEEEEc
Confidence 885 599999999999998755432111 011236899999999 69999976 7788777 89999999
Q ss_pred c--CcccccccCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEee
Q 008342 409 G--SCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVAR 486 (569)
Q Consensus 409 ~--~~~~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~ 486 (569)
| +.++.||+++++.+...|.+|||+|||+++++++|.++++||.||+|+.+|++|+|.+||+.|.++|.|.+++|++.
T Consensus 409 ~~~~~~~~GY~~~~~~~~~~~~~gw~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~V~~~~v~g~ 488 (570)
T PRK04319 409 KGWPSMMRGIWNNPEKYESYFAGDWYVSGDSAYMDEDGYFWFQGRVDDVIKTSGERVGPFEVESKLMEHPAVAEAGVIGK 488 (570)
T ss_pred CCCChHHhHhcCCHHHhhhhhcCCceEeCcEEEECCCeeEEEEecCCCEEEECCEEECHHHHHHHHhhCCCeeecceecc
Confidence 7 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHhc
Q 008342 487 PDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKEM 559 (569)
Q Consensus 487 ~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~ 559 (569)
+++..|+.+.+++++.++... .+...++|.++++++|+.|++|..+++++ ||+|++||++|++|+++..+.
T Consensus 489 ~~~~~g~~~~a~v~~~~~~~~--~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~~~ 560 (570)
T PRK04319 489 PDPVRGEIIKAFVALRPGYEP--SEELKEEIRGFVKKGLGAHAAPREIEFKDKLPKTRSGKIMRRVLKAWELGL 560 (570)
T ss_pred cCcCCceEEEEEEEECCCCCC--CHHHHHHHHHHHHHhcccccCCcEEEEeCCCCCCCchhhhHHHHHHHHhCC
Confidence 999889999999998775432 12256789999999999999999999877 999999999999999987643
No 28
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.6e-67 Score=550.32 Aligned_cols=480 Identities=28% Similarity=0.443 Sum_probs=413.1
Q ss_pred cCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEee
Q 008342 20 LTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNS 99 (569)
Q Consensus 20 ~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 99 (569)
+|+.++|++++.++|+++|+++.++.+||+||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 2 ~~~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 81 (483)
T PRK03640 2 ETMPNWLKQRAFLTPDRTAIEFEEKKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQLGAVAVL 81 (483)
T ss_pred CcHHHHHHHHHHhCCCceEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhCCcEEEe
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHhhh
Q 008342 100 INIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEKFL 179 (569)
Q Consensus 100 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l 179 (569)
+++.++.+++..++++++++.++++.+......... . ..++++.
T Consensus 82 i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~---~---------------------------------~~~~~~~ 125 (483)
T PRK03640 82 LNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGI---S---------------------------------VKFAELM 125 (483)
T ss_pred cCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhc---c---------------------------------ccHHHHh
Confidence 999999999999999999999999876543322100 0 1122222
Q ss_pred hcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHHHHHHH
Q 008342 180 ETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTWSLAA 259 (569)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~ 259 (569)
...............+++++++|||||||.||+|.++|.++..........++++++|++++.+|++|.+++...+..+.
T Consensus 126 ~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~ 205 (483)
T PRK03640 126 NGPKEEAEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLGLTEDDCWLAAVPIFHISGLSILMRSVI 205 (483)
T ss_pred hcccccCCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcCCCcCcEEEEecCHHHHHHHHHHHHHHh
Confidence 22111111112345678999999999999999999999999888777777789999999999999999999987777788
Q ss_pred hcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhhcCCeEec
Q 008342 260 LCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQKGFRITH 339 (569)
Q Consensus 260 ~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~~~~i~~ 339 (569)
.|+++++.+.+++.++++.++++++|++.++|+++..+.+...... . ..++|.++++|+++++...+.+++.++++++
T Consensus 206 ~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~-~-~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~ 283 (483)
T PRK03640 206 YGMRVVLVEKFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEGT-Y-PSSFRCMLLGGGPAPKPLLEQCKEKGIPVYQ 283 (483)
T ss_pred cCCEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCccc-c-CCcceEEEEcCCCCCHHHHHHHHHhCCCeee
Confidence 8888888888999999999999999999999999999987654332 2 4689999999999999999998888999999
Q ss_pred ccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccccccCC
Q 008342 340 TYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGYLKN 419 (569)
Q Consensus 340 ~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~ 419 (569)
.||+||++..+..+... ......+++|.|.+++ ++.+.++ +++++.+ +.|||+++|++++.||+++
T Consensus 284 ~YG~tE~~~~~~~~~~~---------~~~~~~~~vG~p~~~~-~~~i~~~--~~~~~~g--~~Gel~v~g~~~~~gy~~~ 349 (483)
T PRK03640 284 SYGMTETASQIVTLSPE---------DALTKLGSAGKPLFPC-ELKIEKD--GVVVPPF--EEGEIVVKGPNVTKGYLNR 349 (483)
T ss_pred eeccCcccccccccCcc---------cccccCCCcccccCCc-EEEEecC--CCcCCCC--CceEEEEECcchhhhhcCC
Confidence 99999987644332211 1112347899999999 6888875 4677776 7899999999999999999
Q ss_pred cchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCCCCceeeEEE
Q 008342 420 PKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGESPCAFV 499 (569)
Q Consensus 420 ~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v 499 (569)
++.+...|.+|||+|||+++++++|.+++.||.+|+++.+|.++++.+||+.+.+++.|.++++++.+++..++.+.+++
T Consensus 350 ~~~~~~~~~~~~~~tGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~ie~~i~~~~~v~~~~v~~~~~~~~~~~~~~~~ 429 (483)
T PRK03640 350 EDATRETFQDGWFKTGDIGYLDEEGFLYVLDRRSDLIISGGENIYPAEIEEVLLSHPGVAEAGVVGVPDDKWGQVPVAFV 429 (483)
T ss_pred HHHHHHHHhcCCeeccceEEEcCCCCEEEeecccCeEEeCCEEECHHHHHHHHHhCCCeeEEEEEeCCCcccCCceEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888788888877
Q ss_pred EecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHh
Q 008342 500 TLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKE 558 (569)
Q Consensus 500 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~ 558 (569)
+..... ..+++++++++.|+.+++|..+++++ ||+|++||++|++|++++++
T Consensus 430 ~~~~~~-------~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~gK~~r~~l~~~~~~ 482 (483)
T PRK03640 430 VKSGEV-------TEEELRHFCEEKLAKYKVPKRFYFVEELPRNASGKLLRHELKQLVEE 482 (483)
T ss_pred EeCCCC-------CHHHHHHHHHHhccCCCCCcEEEEeCCCCCCCccceeHHHHHHHHhh
Confidence 754432 34789999999999999999998777 99999999999999999875
No 29
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.2e-67 Score=559.42 Aligned_cols=515 Identities=26% Similarity=0.376 Sum_probs=427.6
Q ss_pred cccccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhc-CCCCCCEEEEEcCCchhHHHHHHHhhhcC
Q 008342 16 NYTALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKL-SIGLGTTVSVIAPNVPAMYEAQFGAPMAG 94 (569)
Q Consensus 16 ~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~-g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 94 (569)
..++.|+.++|.+.+.++|+++|+++.++++||+||.+++.++|..|.+. |+++|++|+++++|+++++++++||+++|
T Consensus 6 ~~~~~tl~~~l~~~a~~~~~~~a~~~~~~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 85 (546)
T PRK08314 6 TLPETSLFHNLEVSARRYPDKTAIVFYGRAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAILRAN 85 (546)
T ss_pred CCCCCCHHHHHHHHHHHcCCCcceeecCceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHHHHcC
Confidence 35577999999999999999999999999999999999999999999998 99999999999999999999999999999
Q ss_pred ceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCc--ch-----------
Q 008342 95 AVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESC--DS----------- 161 (569)
Q Consensus 95 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~----------- 161 (569)
++++|+++.++.+++.++++.++++++|++.+....+....... ....++....... ..
T Consensus 86 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (546)
T PRK08314 86 AVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNL--------RLRHVIVAQYSDYLPAEPEIAVPAWLRA 157 (546)
T ss_pred cEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhcc--------CcceEEEecchhhcccccccCccccccc
Confidence 99999999999999999999999999999988766554432221 1222332211000 00
Q ss_pred -hhhHHhhhcchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEE
Q 008342 162 -KQLEYALARGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFL 240 (569)
Q Consensus 162 -~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~ 240 (569)
.........++..|++.+..... .......++++++++|||||||.||+|.++|++++.........+++..+|+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l 235 (546)
T PRK08314 158 EPPLQALAPGGVVAWKEALAAGLA--PPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNSTPESVVL 235 (546)
T ss_pred ccccccccccccccHHHHhcccCC--CCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCceEE
Confidence 00000111234456665543221 122335678999999999999999999999999999888877788899999999
Q ss_pred EcCCccchhhHHHHH-HHHHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecC
Q 008342 241 WTLPMFHGNGWSYTW-SLAALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAG 319 (569)
Q Consensus 241 ~~~p~~~~~g~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g 319 (569)
+.+|++|.+|+...+ .++..|+++++.+.+++..+++.++++++|++.++|.++..++......... ++++|.+++||
T Consensus 236 ~~~p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~-~~~l~~~~~gG 314 (546)
T PRK08314 236 AVLPLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERD-LSSLRYIGGGG 314 (546)
T ss_pred EEcCchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccC-chhhheeeecc
Confidence 999999999986554 4556677777778889999999999999999999999999988765433333 78899999999
Q ss_pred CCCCHHHHHHhhh-cCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCC
Q 008342 320 APPPPSLLFAMSQ-KGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPAD 398 (569)
Q Consensus 320 ~~l~~~~~~~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~ 398 (569)
+++++++.+++.+ ++.++++.||+||++......... .....++|.|.+++ +++|+|++++.+++.+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~-----------~~~~~~~G~~~~g~-~~~i~d~~~~~~~~~g 382 (546)
T PRK08314 315 AAMPEAVAERLKELTGLDYVEGYGLTETMAQTHSNPPD-----------RPKLQCLGIPTFGV-DARVIDPETLEELPPG 382 (546)
T ss_pred ccCCHHHHHHHHHHcCCcEEecccccccccceecCCCc-----------CCCCCccCcccCCe-EEEEEeCCCCcCCCCC
Confidence 9999999999884 599999999999998655432210 11236789999999 6999998889999888
Q ss_pred CCceEEEEEecCcccccccCCcchhhhhhc----CCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhc
Q 008342 399 GKTIGEIVMRGSCVMKGYLKNPKANEEAFA----NGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYL 474 (569)
Q Consensus 399 ~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~----~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~ 474 (569)
+.|||+++|++++.||+++++.+...|. ++||+|||+|+++++|.+++.||.||+|+++|.+|+|.+||.+|.+
T Consensus 383 --~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~i~~ 460 (546)
T PRK08314 383 --EVGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPAEVENLLYK 460 (546)
T ss_pred --CceEEEEECCchhccccCChhHhhhhhhhcCCCceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHHHHHHHHHh
Confidence 7899999999999999999988888773 3599999999999999999999999999999999999999999999
Q ss_pred CCCceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHH
Q 008342 475 HPLVLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLR 553 (569)
Q Consensus 475 ~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~ 553 (569)
+|+|.+++|++.++...++.++++++..++.... ...+++.++|+++|++|++|..+++++ ||+|++||++|+.|+
T Consensus 461 ~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~---~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~r~~L~ 537 (546)
T PRK08314 461 HPAIQEACVIATPDPRRGETVKAVVVLRPEARGK---TTEEEIIAWAREHMAAYKYPRIVEFVDSLPKSGSGKILWRQLQ 537 (546)
T ss_pred CcchheEEEEeCCCcccCceeEEEEEECCCCCCC---CCHHHHHHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHH
Confidence 9999999999999988889999999987764321 134789999999999999999999877 999999999999998
Q ss_pred HHHHh
Q 008342 554 AKAKE 558 (569)
Q Consensus 554 ~~~~~ 558 (569)
+...+
T Consensus 538 ~~~~~ 542 (546)
T PRK08314 538 EQEKA 542 (546)
T ss_pred HHHhh
Confidence 76554
No 30
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.2e-67 Score=565.00 Aligned_cols=517 Identities=20% Similarity=0.249 Sum_probs=410.0
Q ss_pred HHHHHHHhhhhCCCceeeeeC------CeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCc
Q 008342 22 PLWFINRAATLHPTRKSVVYG------SKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGA 95 (569)
Q Consensus 22 l~~~l~~~a~~~p~~~a~~~~------~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 95 (569)
..++|++++..+|+++|+++. .+++||+||.+++.++|++|.+.|+++||+|+++++|++++++++|||+++|+
T Consensus 55 ~~~~l~~~~~~~p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Ga 134 (629)
T PRK10524 55 CHNAVDRHLAKRPEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACARIGA 134 (629)
T ss_pred HHHHHHHhhccCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCc
Confidence 377888998899999999872 36899999999999999999999999999999999999999999999999999
Q ss_pred eEeeccccCCHHHHHHHHhcCCceEEEEcccc---------hHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHH
Q 008342 96 VLNSINIRLNATVVAFILSHASSAVVIVDQEF---------FSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEY 166 (569)
Q Consensus 96 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 166 (569)
+++|+++.++.+++.+++++++++++|+++.. .+.+.++..... .....++.++.......
T Consensus 135 v~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~vi~~~~~~~~~~---- 204 (629)
T PRK10524 135 IHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQ------HKPRHVLLVDRGLAPMA---- 204 (629)
T ss_pred EEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcC------CCCCEEEEEeCCCCCcC----
Confidence 99999999999999999999999999997642 223333332221 02345665553211100
Q ss_pred hhhcchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHH-hHhHhCCCCCcEEEEcCCc
Q 008342 167 ALARGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLN-GALIWGMNEGAVFLWTLPM 245 (569)
Q Consensus 167 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~-~~~~~~~~~~d~~~~~~p~ 245 (569)
........|.++...............++++++++|||||||.||+|.++|.+++..... ....+++.++|++++..|+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 284 (629)
T PRK10524 205 RVAGRDVDYATLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETFFCASDI 284 (629)
T ss_pred cccCCcccHHHHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEEEEcCCC
Confidence 011112345555443222111112245688999999999999999999999987554433 3445688899999999999
Q ss_pred cchhhHHHHHH-HHHhcceEEEec----cCChHHHHHHHHhcCccEEeehHHHHHHHHccCCC--CCCCCcccceeeeec
Q 008342 246 FHGNGWSYTWS-LAALCGTSICLR----QVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPE--DTILPLTNVVNVNTA 318 (569)
Q Consensus 246 ~~~~g~~~~~~-~~~~g~~~~~~~----~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~--~~~~~l~~l~~~~~~ 318 (569)
.|..++.+.+. +++.|+++++.. .+++..+++.|+++++|++.++|++++.|.+.... .... ++++|.++++
T Consensus 285 ~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~-l~~lr~i~~~ 363 (629)
T PRK10524 285 GWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHD-LSSLRALFLA 363 (629)
T ss_pred CeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccC-hhheeEEEEe
Confidence 99988755444 455566666654 35788999999999999999999999998875432 1223 7899999999
Q ss_pred CCCCCHHHHHHhhh-cCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCC
Q 008342 319 GAPPPPSLLFAMSQ-KGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPA 397 (569)
Q Consensus 319 g~~l~~~~~~~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~ 397 (569)
|+++++++.+++.+ +++++++.||+||+++.+........ ......+++|.|.+++ +++|+|+++|++++.
T Consensus 364 Ge~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~-------~~~~~~~~~G~p~~g~-~~~i~d~~~g~~~~~ 435 (629)
T PRK10524 364 GEPLDEPTASWISEALGVPVIDNYWQTETGWPILAIARGVE-------DRPTRLGSPGVPMYGY-NVKLLNEVTGEPCGP 435 (629)
T ss_pred CCCCCHHHHHHHHHhcCCCeEeccccccccchhhcCCCCcc-------cCcCCCCCcccCcCCc-eEEEEeCCCCCCCCC
Confidence 99999999998874 58999999999999854433221100 0112347899999999 699999866999988
Q ss_pred CCCceEEEEEecC---cccccccCCcchhhhhh----cCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHH
Q 008342 398 DGKTIGEIVMRGS---CVMKGYLKNPKANEEAF----ANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEK 470 (569)
Q Consensus 398 ~~~~~Gel~v~~~---~~~~gy~~~~~~~~~~~----~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~ 470 (569)
| +.|||+++|+ ..+.+||++++.....+ .++||+|||+|+++++|+++++||.||+|+++|.+|+|.+||+
T Consensus 436 g--~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~ 513 (629)
T PRK10524 436 N--EKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRDADGYYFILGRTDDVINVAGHRLGTREIEE 513 (629)
T ss_pred C--CcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEEeCHHHHHH
Confidence 7 7899999998 57789999887665443 4689999999999999999999999999999999999999999
Q ss_pred HHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcchh---hhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCc
Q 008342 471 VLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADEL---DKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGK 546 (569)
Q Consensus 471 ~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~---~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GK 546 (569)
+|.+||.|.+++|++.+++..|+.+++++++.++.... ......++|+++++++|+.+++|..+.+++ ||+|++||
T Consensus 514 ~l~~~p~V~e~~vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~i~~v~~lP~T~sGK 593 (629)
T PRK10524 514 SISSHPAVAEVAVVGVKDALKGQVAVAFVVPKDSDSLADREARLALEKEIMALVDSQLGAVARPARVWFVSALPKTRSGK 593 (629)
T ss_pred HHHhCCCcceEEEEccccCCCCeEEEEEEEECCCCccccccchHHHHHHHHHHHHhhcCCCcCCCEEEEcCCCCCCCCcc
Confidence 99999999999999999998899999999987653211 122356889999999999999999999887 99999999
Q ss_pred ccHHHHHHHHHhc
Q 008342 547 IQKHLLRAKAKEM 559 (569)
Q Consensus 547 i~r~~l~~~~~~~ 559 (569)
++|+.|++++...
T Consensus 594 i~R~~L~~~~~~~ 606 (629)
T PRK10524 594 LLRRAIQAIAEGR 606 (629)
T ss_pred hHHHHHHHHHcCC
Confidence 9999999987643
No 31
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.9e-68 Score=558.16 Aligned_cols=520 Identities=20% Similarity=0.240 Sum_probs=410.9
Q ss_pred ccccccccccCHHHHHHHhhhhCCCceeeeeCC--eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHH
Q 008342 11 PKISANYTALTPLWFINRAATLHPTRKSVVYGS--KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQF 88 (569)
Q Consensus 11 ~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~--~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~l 88 (569)
...+..-.+.++.+.|.+.|+++|+++|+++.+ +.+||+||.++++++|+.|.+.|+++|++|+++++|++++++++|
T Consensus 5 ~~~~~~~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~l 84 (540)
T PRK05857 5 KFQAMPQLPSTVLDRVFEQARQQPEAIALRRCDGTSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVL 84 (540)
T ss_pred cccccccCCcchHHHHHHHHhhCCCcEEEeecCCCceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHH
Confidence 344555667799999999999999999998643 689999999999999999999999999999999999999999999
Q ss_pred HhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhh
Q 008342 89 GAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYAL 168 (569)
Q Consensus 89 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 168 (569)
||+++|++++|+++.++.+++.++++.++++++|+++.............. ...++.++......
T Consensus 85 A~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~------- 149 (540)
T PRK05857 85 ACAKLGAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEALH--------SIPVIAVDIAAVTR------- 149 (540)
T ss_pred HHHHcCeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhcccccccccc--------ccceeEeecccccc-------
Confidence 999999999999999999999999999999999998865322111111111 11233332211000
Q ss_pred hcchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhH----hHhCCCCCcEEEEcCC
Q 008342 169 ARGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGA----LIWGMNEGAVFLWTLP 244 (569)
Q Consensus 169 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~----~~~~~~~~d~~~~~~p 244 (569)
.+...+..... ........+++++++|||||||.||+|.++|+++.++..... ..+.+..++++++.+|
T Consensus 150 -----~~~~~~~~~~~--~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 222 (540)
T PRK05857 150 -----ESEHSLDAASL--AGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLP 222 (540)
T ss_pred -----ccccccccccc--ccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCC
Confidence 00000000000 011224668899999999999999999999999876654322 1235667889999999
Q ss_pred ccchhhHHHHHHHHHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCH
Q 008342 245 MFHGNGWSYTWSLAALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPP 324 (569)
Q Consensus 245 ~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~ 324 (569)
++|.+++...+..++.|++++ +...++..+++.|+++++|++.++|+++..+.......... ++++|.+++||++++.
T Consensus 223 ~~h~~~l~~~~~~l~~G~~~v-~~~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~-~~~lr~~~~gG~~~~~ 300 (540)
T PRK05857 223 ATHIGGLWWILTCLMHGGLCV-TGGENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANAT-VPSLRLVGYGGSRAIA 300 (540)
T ss_pred ccccchHHHHHHHhhcceeEE-ecCCChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCc-CccceEEEEcCccCCc
Confidence 999999987777777788765 45678899999999999999999999999998775444444 8899999999999998
Q ss_pred HHHHHhhhcCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCC---CCCc
Q 008342 325 SLLFAMSQKGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPA---DGKT 401 (569)
Q Consensus 325 ~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~---~~~~ 401 (569)
...+++...++++++.||+||++.....+..... .......+++|.|.+++ +++|+|+++..+++. ..++
T Consensus 301 ~~~~~~~~~g~~i~~~YG~TE~~~~~~~~~~~~~------~~~~~~~~~~G~~~~g~-~v~i~d~~~~~~~~~~~~~~~~ 373 (540)
T PRK05857 301 ADVRFIEATGVRTAQVYGLSETGCTALCLPTDDG------SIVKIEAGAVGRPYPGV-DVYLAATDGIGPTAPGAGPSAS 373 (540)
T ss_pred hhHHHHHHhCCeeecccCCCcCCceeeecccccc------cccccccCCcCcccCCc-EEEEECccccCccccccCCCCC
Confidence 8776555669999999999999854332221110 00111236899999999 699999874434432 1237
Q ss_pred eEEEEEecCcccccccCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceee
Q 008342 402 IGEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEA 481 (569)
Q Consensus 402 ~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~ 481 (569)
.|||+++|++++.||+++++.+.+.|.+|||+|||+|+++++|++++.||.||+|+++|.+|+|.+||.+|..||.|.++
T Consensus 374 ~Gel~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~V~~~ 453 (540)
T PRK05857 374 FGTLWIKSPANMLGYWNNPERTAEVLIDGWVNTGDLLERREDGFFYIKGRSSEMIICGGVNIAPDEVDRIAEGVSGVREA 453 (540)
T ss_pred cceEEEeCcchhhhhhCCccchhhhcCCCceeccceEEEcCCceEEEeccccccEecCCEEECHHHHHHHHHhCCCeeEE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHhcC
Q 008342 482 AVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKEMG 560 (569)
Q Consensus 482 ~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~ 560 (569)
+|++.++...++.+.++++..+.......++..+.+.+.+++.+++|++|..+.+.+ ||+|++||++|++|++.+++..
T Consensus 454 ~v~~~~~~~~~~~~~~~vv~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~P~~v~~~~~iP~t~~GKi~r~~l~~~~~~~~ 533 (540)
T PRK05857 454 ACYEIPDEEFGALVGLAVVASAELDESAARALKHTIAARFRRESEPMARPSTIVIVTDIPRTQSGKVMRASLAAAATADK 533 (540)
T ss_pred EEEecCccccccceEEEEEeCCCCChhhHHHHHHHHHHHHHhhhccccCCeEEEEhhcCCCCCCcceeHHHHHHhhhhcc
Confidence 999999888788888888766543322222355677778888899999999999877 9999999999999999988654
Q ss_pred C
Q 008342 561 P 561 (569)
Q Consensus 561 ~ 561 (569)
.
T Consensus 534 ~ 534 (540)
T PRK05857 534 A 534 (540)
T ss_pred c
Confidence 3
No 32
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.5e-67 Score=557.50 Aligned_cols=513 Identities=25% Similarity=0.351 Sum_probs=414.7
Q ss_pred ccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHh-cCCCCCCEEEEEcCCchhHHHHHHHhhhcCceE
Q 008342 19 ALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSK-LSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVL 97 (569)
Q Consensus 19 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~-~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 97 (569)
..|+.++|+++++.+|+++|+++.++++||+||.++++++|+.|.+ .|+++||+|+++++|++++++++|||+++|+++
T Consensus 23 ~~~~~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~~Ga~~ 102 (562)
T PRK05677 23 YPNIQAVLKQSCQRFADKPAFSNLGKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIV 102 (562)
T ss_pred cCcHHHHHHHHHHhCCCCeeEEECCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEE
Confidence 3589999999999999999999999999999999999999999997 699999999999999999999999999999999
Q ss_pred eeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcch--hh------------
Q 008342 98 NSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDS--KQ------------ 163 (569)
Q Consensus 98 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~------------ 163 (569)
+|++|.++.+++.+++++++++++|++.+....+.+..... ..+.++..+...... ..
T Consensus 103 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (562)
T PRK05677 103 VNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKT--------GVKHVIVTEVADMLPPLKRLLINAVVKHVKK 174 (562)
T ss_pred eecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhcc--------CcceeEEecccccccchhhhhcccchhhccc
Confidence 99999999999999999999999999877655444332211 122222221110000 00
Q ss_pred -hHHhhhcchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhC--CC-CCcEE
Q 008342 164 -LEYALARGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWG--MN-EGAVF 239 (569)
Q Consensus 164 -~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~--~~-~~d~~ 239 (569)
...........+.+.+..............++++++++|||||||.||+|.++|.++..........++ +. ..+++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~ 254 (562)
T PRK05677 175 MVPAYHLPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEGCEIL 254 (562)
T ss_pred cccccCCcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCCCccEE
Confidence 000001122344444433322211122346789999999999999999999999999877665554443 33 34688
Q ss_pred EEcCCccchhhHHHHHHHH-HhcceEEEec-cCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeee
Q 008342 240 LWTLPMFHGNGWSYTWSLA-ALCGTSICLR-QVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNT 317 (569)
Q Consensus 240 ~~~~p~~~~~g~~~~~~~~-~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~ 317 (569)
++.+|++|.+++...+... ..|++.++.+ ..++..+++.|+++++|++.++|+++..+.......... ++++|.+++
T Consensus 255 ~~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~-~~~lr~v~~ 333 (562)
T PRK05677 255 IAPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLD-FSALKLTLS 333 (562)
T ss_pred EEcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCC-hhhceEEEE
Confidence 9999999999986544444 4455555553 468899999999999999999999999998765433333 678999999
Q ss_pred cCCCCCHHHHHHhhhc-CCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccC
Q 008342 318 AGAPPPPSLLFAMSQK-GFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVP 396 (569)
Q Consensus 318 ~g~~l~~~~~~~~~~~-~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~ 396 (569)
||+++++++.+++.+. ++++++.||+||+++++..+... ....+++|.|.+++ +++|+|++ +++++
T Consensus 334 gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~-----------~~~~~~vG~~~~~~-~v~i~d~~-~~~~~ 400 (562)
T PRK05677 334 GGMALQLATAERWKEVTGCAICEGYGMTETSPVVSVNPSQ-----------AIQVGTIGIPVPST-LCKVIDDD-GNELP 400 (562)
T ss_pred cCccCCHHHHHHHHHHcCCCeeccCCccccCcceeecCcc-----------CCCCCccCccCCCC-EEEEECCC-CCCCC
Confidence 9999999999998854 99999999999998766543211 11236799999999 69999986 88888
Q ss_pred CCCCceEEEEEecCcccccccCCcchhhhhhc-CCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcC
Q 008342 397 ADGKTIGEIVMRGSCVMKGYLKNPKANEEAFA-NGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLH 475 (569)
Q Consensus 397 ~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 475 (569)
.| +.|||+++|+.++.||+++++.+...|. +|||+|||+|+++++|.+++.||.+|+|+++|.+|+|.+||+.|.++
T Consensus 401 ~g--~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p~eiE~~l~~~ 478 (562)
T PRK05677 401 LG--EVGELCVKGPQVMKGYWQRPEATDEILDSDGWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYPNELEDVLAAL 478 (562)
T ss_pred CC--CCeEEEEecCccchhhcCCchhhhhccCCCCcccccceEEECCCCcEEEEecCcCeEEeCCEEECHHHHHHHHHhC
Confidence 88 7899999999999999999999988885 89999999999999999999999999999999999999999999999
Q ss_pred CCceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHH
Q 008342 476 PLVLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRA 554 (569)
Q Consensus 476 ~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~ 554 (569)
|.|.+++|++.+++..++.+++++++.++... ..+++.+++++.|++|++|..+.+++ ||+|++||++|++|++
T Consensus 479 ~~v~~~~v~g~~~~~~g~~~~~~v~~~~~~~~-----~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~sGKi~r~~L~~ 553 (562)
T PRK05677 479 PGVLQCAAIGVPDEKSGEAIKVFVVVKPGETL-----TKEQVMEHMRANLTGYKVPKAVEFRDELPTTNVGKILRRELRD 553 (562)
T ss_pred CCccEEEEEeccCccCCceEEEEEEeCCCCCC-----CHHHHHHHHHHhhhhccCCcEEEEeccCCCCCcccccHHHHHH
Confidence 99999999999998888889999887755333 45789999999999999999999877 9999999999999998
Q ss_pred HHHhcC
Q 008342 555 KAKEMG 560 (569)
Q Consensus 555 ~~~~~~ 560 (569)
++..+.
T Consensus 554 ~~~~~~ 559 (562)
T PRK05677 554 EELKKA 559 (562)
T ss_pred HHHHhc
Confidence 776543
No 33
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=2.3e-67 Score=555.34 Aligned_cols=504 Identities=26% Similarity=0.374 Sum_probs=421.2
Q ss_pred ccCHHHHHHHhhhhCCCceeeeeC--CeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCce
Q 008342 19 ALTPLWFINRAATLHPTRKSVVYG--SKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAV 96 (569)
Q Consensus 19 ~~~l~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 96 (569)
.+++.+++.+++.++|+++|+++. ++++||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 22 ~~~~~~~l~~~~~~~~~~~a~~~~~~~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~la~~~~G~~ 101 (537)
T PLN02246 22 HLPLHDYCFERLSEFSDRPCLIDGATGRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAFLGASRRGAV 101 (537)
T ss_pred CCcHHHHHHHHHHhCCCCeEEEecCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHHcCEE
Confidence 568999999999999999999875 478999999999999999999999999999999999999999999999999999
Q ss_pred EeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHH
Q 008342 97 LNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYE 176 (569)
Q Consensus 97 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 176 (569)
++|+++.++.+++..+++.++++++|++......+...... ....++.+++.. .....+.
T Consensus 102 ~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~---------~~~~~i~~~~~~-----------~~~~~~~ 161 (537)
T PLN02246 102 TTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAED---------DGVTVVTIDDPP-----------EGCLHFS 161 (537)
T ss_pred EecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhc---------CCceEEEeCCCC-----------CCceeHH
Confidence 99999999999999999999999999988766555433210 112344444321 1123344
Q ss_pred hhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHh----HhCCCCCcEEEEcCCccchhhHH
Q 008342 177 KFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGAL----IWGMNEGAVFLWTLPMFHGNGWS 252 (569)
Q Consensus 177 ~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~----~~~~~~~d~~~~~~p~~~~~g~~ 252 (569)
++........+ .....++++++++|||||||.||+|.++|+++......... .+++.++|++++..|++|.+++.
T Consensus 162 ~~~~~~~~~~~-~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~ 240 (537)
T PLN02246 162 ELTQADENELP-EVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLN 240 (537)
T ss_pred HHhcCCCCCCC-CCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHH
Confidence 44433222221 12346789999999999999999999999999877655433 46788999999999999999986
Q ss_pred HHHH-HHHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhh
Q 008342 253 YTWS-LAALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMS 331 (569)
Q Consensus 253 ~~~~-~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~ 331 (569)
..+. .+..|+++++.+.+++..+++.|+++++|++.++|+++..|.+........ ++++|.+++||+++++++.+.+.
T Consensus 241 ~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~-~~~lr~~~~gg~~l~~~~~~~~~ 319 (537)
T PLN02246 241 SVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYD-LSSIRMVLSGAAPLGKELEDAFR 319 (537)
T ss_pred HHHHHHHhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccC-ccceeEEEEecCcCCHHHHHHHH
Confidence 5544 455677777778889999999999999999999999999998765544444 78999999999999999999998
Q ss_pred hc--CCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEec
Q 008342 332 QK--GFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRG 409 (569)
Q Consensus 332 ~~--~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~ 409 (569)
+. +..+++.||+||++++++.+..... .......+++|.|++++ +++++|++++++++.| +.|||+++|
T Consensus 320 ~~~~~~~~~~~YG~tE~~~~~~~~~~~~~------~~~~~~~~~~G~~~~~~-~~~i~d~~~~~~~~~g--~~Gel~v~g 390 (537)
T PLN02246 320 AKLPNAVLGQGYGMTEAGPVLAMCLAFAK------EPFPVKSGSCGTVVRNA-ELKIVDPETGASLPRN--QPGEICIRG 390 (537)
T ss_pred HHcCCCeEeccccccccCcccccccccCC------CCccccCCccccccCCc-EEEEecCCCCCcCCCC--CceEEEEEC
Confidence 54 7889999999999876554321100 00112236789999999 6999998889999988 789999999
Q ss_pred CcccccccCCcchhhhhh-cCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecC
Q 008342 410 SCVMKGYLKNPKANEEAF-ANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPD 488 (569)
Q Consensus 410 ~~~~~gy~~~~~~~~~~~-~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~ 488 (569)
++++.||+++++.+...| .+|||+|||+|+++++|.+++.||.||+|+.+|.+|+|.+||+.|.++|.|.+++|++.++
T Consensus 391 ~~~~~GY~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~ 470 (537)
T PLN02246 391 PQIMKGYLNDPEATANTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLISHPSIADAAVVPMKD 470 (537)
T ss_pred CchhccccCCchhhhhcccCCCCeeecceEEEeCCCeEEEEecccceEEECCEEECcHHHHHHHHhCCCeeEEEEEcccC
Confidence 999999999999988887 4899999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHh
Q 008342 489 ERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKE 558 (569)
Q Consensus 489 ~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~ 558 (569)
...++.++++++..++... ..++|+++++++++.|++|..+.+++ ||+|++||++|++|++++.+
T Consensus 471 ~~~~~~~~~~v~~~~~~~~-----~~~~l~~~l~~~l~~~~~p~~i~~~~~~P~t~~GKi~r~~L~~~~~~ 536 (537)
T PLN02246 471 EVAGEVPVAFVVRSNGSEI-----TEDEIKQFVAKQVVFYKRIHKVFFVDSIPKAPSGKILRKDLRAKLAA 536 (537)
T ss_pred ccCCceeEEEEEeCCCCCC-----CHHHHHHHHHhhCcCccccceEEEeccCCCCCcchhhHHHHHHHHhc
Confidence 8888889999887765433 45789999999999999999888776 99999999999999988753
No 34
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.6e-67 Score=552.62 Aligned_cols=520 Identities=30% Similarity=0.502 Sum_probs=423.6
Q ss_pred cccCHHHHHHHhhhhCCCceeeeeC--C--eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhc
Q 008342 18 TALTPLWFINRAATLHPTRKSVVYG--S--KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMA 93 (569)
Q Consensus 18 ~~~~l~~~l~~~a~~~p~~~a~~~~--~--~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~ 93 (569)
-+.++.++|++++..+|++.++.+. + +.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++
T Consensus 8 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~~~~ 87 (539)
T PRK07008 8 MPLLISSLIAHAARHAGDTEIVSRRVEGDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGVSGS 87 (539)
T ss_pred CCCCHHHHHHHHHhhCCCceEEEeeccCcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhc
Confidence 4458899999999999999888752 2 68999999999999999999999999999999999999999999999999
Q ss_pred CceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchh
Q 008342 94 GAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAI 173 (569)
Q Consensus 94 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 173 (569)
|++++|+++.++.+++..+++.+++++++++.+....+.+...... ....++.+.+...... ......
T Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~-----~~~~~~ 155 (539)
T PRK07008 88 GAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCP-------NVKGWVAMTDAAHLPA-----GSTPLL 155 (539)
T ss_pred CcEEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCC-------CceEEEEEccCCcccc-----CCcccc
Confidence 9999999999999999999999999999999877665544433322 2344444443221000 012245
Q ss_pred hHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHH--HhHhHhCCCCCcEEEEcCCccchhhH
Q 008342 174 EYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSL--NGALIWGMNEGAVFLWTLPMFHGNGW 251 (569)
Q Consensus 174 ~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~--~~~~~~~~~~~d~~~~~~p~~~~~g~ 251 (569)
.+++++......... ....++++++++|||||||.||+|.+||.+++.... .....+++.++|++++..|++|.+++
T Consensus 156 ~~~~l~~~~~~~~~~-~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~ 234 (539)
T PRK07008 156 CYETLVGAQDGDYDW-PRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHVNAW 234 (539)
T ss_pred cHHHHhcccCCCcCc-ccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHhhhH
Confidence 666665443322221 234567899999999999999999999999865432 23346778899999999999998887
Q ss_pred HHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHh
Q 008342 252 SYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAM 330 (569)
Q Consensus 252 ~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~ 330 (569)
...+..+..|+++++. ..+++..+++.++++++|++.++|+++..+++........ +++++.++++|+++++++.+++
T Consensus 235 ~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~-~~~l~~~~~~G~~l~~~~~~~~ 313 (539)
T PRK07008 235 GLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLR-FSTLRRTVIGGSACPPAMIRTF 313 (539)
T ss_pred HHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCC-cccceEEEEcCCCCCHHHHHHH
Confidence 7666667778887776 4578999999999999999999999999998876554444 7899999999999999999999
Q ss_pred h-hcCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEec
Q 008342 331 S-QKGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRG 409 (569)
Q Consensus 331 ~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~ 409 (569)
. .+++++++.||+||++..++.+.........+.........++|.|.+++ .++|+|++ +++++.++++.|||+++|
T Consensus 314 ~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~-~~~i~d~~-~~~~~~~~~~~Gei~v~g 391 (539)
T PRK07008 314 EDEYGVEVIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGV-DMKIVGDD-GRELPWDGKAFGDLQVRG 391 (539)
T ss_pred HHHhCCceecccccccccccceecccccccccCCchhhhhhcccCCccccce-EEEEECCC-CCccCCCCCcceEEEEeC
Confidence 7 45999999999999997665543221111111111122346789999999 69999975 888876654689999999
Q ss_pred CcccccccCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCC
Q 008342 410 SCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDE 489 (569)
Q Consensus 410 ~~~~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~ 489 (569)
++++.||++++. ..+.+|||+|||++++++||++++.||.+|+|+.+|.+|+|.+||..|..+|.|.++++++.+++
T Consensus 392 ~~~~~gy~~~~~---~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~v~~~~v~~~~~~ 468 (539)
T PRK07008 392 PWVIDRYFRGDA---SPLVDGWFPTGDVATIDADGFMQITDRSKDVIKSGGEWISSIDIENVAVAHPAVAEAACIACAHP 468 (539)
T ss_pred CccchhhcCChh---hhhcCCCcccCceEEEcCCCcEEEeecccCEEEeCCeEEcHHHHHHHHHhCCceeEEEEEecCCc
Confidence 999999999873 34568999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHhcCC
Q 008342 490 RWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKEMGP 561 (569)
Q Consensus 490 ~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~~ 561 (569)
..++.++++++..++... ..+++.+++++++++|.+|..+++++ ||+|++||++|++|++++.+-..
T Consensus 469 ~~~~~~~~~v~~~~~~~~-----~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sgKi~r~~l~~~~~~~~~ 536 (539)
T PRK07008 469 KWDERPLLVVVKRPGAEV-----TREELLAFYEGKVAKWWIPDDVVFVDAIPHTATGKLQKLKLREQFRDYVL 536 (539)
T ss_pred hhccceEEEEEeCCCCcc-----CHHHHHHHHHhhcccccCCeEEEEecCCCCCCccceeHHHHHHHHHhhcc
Confidence 888889998887765433 45789999999999999999998777 99999999999999999887543
No 35
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.2e-67 Score=551.00 Aligned_cols=505 Identities=32% Similarity=0.495 Sum_probs=428.0
Q ss_pred cccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceE
Q 008342 18 TALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVL 97 (569)
Q Consensus 18 ~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 97 (569)
..+++.++|++.++.+|+++|+.+.++++||+||.+.+.++|+.|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 3 ~~~~i~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~G~~~ 82 (513)
T PRK07656 3 EWMTLPELLARAARRFGDKEAYVFGDQRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKAGAVV 82 (513)
T ss_pred ccccHHHHHHHHHHHCCCCeEEEeCCCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEE
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHh
Q 008342 98 NSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEK 177 (569)
Q Consensus 98 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (569)
+|+++.++.+.+..++++++++++++++............+. ....++.+....... ......+|++
T Consensus 83 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~------~~~~~~~~~~ 149 (513)
T PRK07656 83 VPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLP-------ALEHVVICETEEDDP------HTEKMKTFTD 149 (513)
T ss_pred EecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccC-------CccEEEEEcCccccc------CccccccHHH
Confidence 999999999999999999999999999887665544332222 234444444332110 0012245666
Q ss_pred hhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHHHHH
Q 008342 178 FLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTWSL 257 (569)
Q Consensus 178 ~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~ 257 (569)
++...... .......++++++++|||||||.||+|.++|.++..........+++++++++++.+|++|.+++...+..
T Consensus 150 ~~~~~~~~-~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (513)
T PRK07656 150 FLAAGDPA-ERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTEGDRYLAANPFFHVFGYKAGVNA 228 (513)
T ss_pred HHhcCCCC-CCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhCCCCCCeEEEccchHHHHHHHHHHHH
Confidence 65543321 12233577899999999999999999999999999888888888899999999999999999998765544
Q ss_pred -HHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhh-hcCC
Q 008342 258 -AALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMS-QKGF 335 (569)
Q Consensus 258 -~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~~ 335 (569)
+..|+++++...+++..+++.|+++++|++.++|+++..+.+........ ++++|.+++||+++++++.+++. .++.
T Consensus 229 ~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~-~~~l~~v~~~g~~~~~~~~~~~~~~~~~ 307 (513)
T PRK07656 229 PLMRGATILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAED-LSSLRLAVTGAASMPVALLERFESELGV 307 (513)
T ss_pred HHHcCceEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCC-ccceeeEEecCCCCCHHHHHHHHHHcCC
Confidence 45566665656788999999999999999999999999999886655444 88999999999999999999988 4587
Q ss_pred -eEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccc
Q 008342 336 -RITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMK 414 (569)
Q Consensus 336 -~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~ 414 (569)
++++.||+||++++++.+...... .....++|.|.+++ .++|+|++ +++++.| +.|||+++|+.++.
T Consensus 308 ~~~~~~YG~tE~~~~~~~~~~~~~~--------~~~~~~vG~~~~~~-~~~i~d~~-~~~~~~g--~~Gel~v~~~~~~~ 375 (513)
T PRK07656 308 DIVLTGYGLSEASGVTTFNRLDDDR--------KTVAGTIGTAIAGV-ENKIVNEL-GEEVPVG--EVGELLVRGPNVMK 375 (513)
T ss_pred CceEeEEccccCCCceeecCccccc--------cccCCCccccCCCc-EEEEECCC-CCCCCCC--CceEEEEEcchhhh
Confidence 899999999998887766532211 01136899999999 69999976 8888877 78999999999999
Q ss_pred cccCCcchhhhhhc-CCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCCCCc
Q 008342 415 GYLKNPKANEEAFA-NGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGE 493 (569)
Q Consensus 415 gy~~~~~~~~~~~~-~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~ 493 (569)
||++++..+...+. +|||+|||+|+++++|.++++||.||+++++|.++++.+||+.|.++++|.+++|++.+++..|+
T Consensus 376 gy~~~~~~~~~~~~~~~~~~tGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~ 455 (513)
T PRK07656 376 GYYDDPEATAAAIDADGWLHTGDLGRLDEEGYLYIVDRKKDMFIVGGFNVYPAEVEEVLYEHPAVAEAAVIGVPDERLGE 455 (513)
T ss_pred hhcCCHHHHhhhhccCCceeccceEEEcCCeeEEEEecccceEEeCCEEeCHHHHHHHHHhCCCeeEEEEEecCCcccCc
Confidence 99999988888886 89999999999999999999999999999999999999999999999999999999998888888
Q ss_pred eeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHH
Q 008342 494 SPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRA 554 (569)
Q Consensus 494 ~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~ 554 (569)
.+.++++..+.... ..+++.+++++.|+.+++|..+.+++ ||+|++||++|+.|++
T Consensus 456 ~~~~~v~~~~~~~~-----~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~gK~~r~~l~~ 512 (513)
T PRK07656 456 VGKAYVVLKPGAEL-----TEEELIAYCREHLAKYKVPRSIEFLDELPKNATGKVLKRALRE 512 (513)
T ss_pred eEEEEEEECCCCCC-----CHHHHHHHHHhhcccccCCCEEEEecCCCCCCccceeHHHHhc
Confidence 89999988754333 45789999999999999999998777 9999999999999974
No 36
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=1.9e-67 Score=557.81 Aligned_cols=507 Identities=25% Similarity=0.326 Sum_probs=410.8
Q ss_pred cCHHHHHHHhhhhCCCceeeeeCC--eeeeHHHHHHHHHHHHHHHHh-cCCCCCCEEEEEcCCchhHHHHHHHhhhcCce
Q 008342 20 LTPLWFINRAATLHPTRKSVVYGS--KHYTWHQTYRRCRRFASALSK-LSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAV 96 (569)
Q Consensus 20 ~~l~~~l~~~a~~~p~~~a~~~~~--~~~Ty~el~~~~~~la~~L~~-~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 96 (569)
.++.+.+... ..+|+++|+++.. .++||+||.++++++|++|.+ .|+++||+|+++++|++++++++|||+++|++
T Consensus 40 ~~~~~~l~~~-~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~~~~la~~~~G~v 118 (560)
T PLN02574 40 LDAVSFIFSH-HNHNGDTALIDSSTGFSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFPVIFLAVLSLGGI 118 (560)
T ss_pred CCHHHHHhcC-cccCCCCEEEECCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHHHHHhCeE
Confidence 4444444443 5799999999864 379999999999999999998 99999999999999999999999999999999
Q ss_pred EeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHH
Q 008342 97 LNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYE 176 (569)
Q Consensus 97 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 176 (569)
++|++|.++.+++.++++.++++++|++.+....+.. . ...++.+.+...... .......|.
T Consensus 119 ~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~----~---------~~~~~~~~~~~~~~~-----~~~~~~~~~ 180 (560)
T PLN02574 119 VTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSP----L---------GVPVIGVPENYDFDS-----KRIEFPKFY 180 (560)
T ss_pred EeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHh----c---------CCcEEecCccccccc-----CccCcccHH
Confidence 9999999999999999999999999998765443321 1 112333321100000 001123445
Q ss_pred hhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHh----HhC-CCCCcEEEEcCCccchhhH
Q 008342 177 KFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGAL----IWG-MNEGAVFLWTLPMFHGNGW 251 (569)
Q Consensus 177 ~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~----~~~-~~~~d~~~~~~p~~~~~g~ 251 (569)
+++....... ......++++++++|||||||.||+|.+||+++...+..... .+. ...+++++..+|++|.+|+
T Consensus 181 ~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~ 259 (560)
T PLN02574 181 ELIKEDFDFV-PKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGL 259 (560)
T ss_pred HHhhcCCccc-ccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHH
Confidence 5444432221 122345789999999999999999999999998877665433 122 2356888999999999998
Q ss_pred HHHHHHH-HhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHh
Q 008342 252 SYTWSLA-ALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAM 330 (569)
Q Consensus 252 ~~~~~~~-~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~ 330 (569)
...+... ..|++.++...+++..+++.|+++++|++.++|+++..|.+.........++++|.+++||+++++++.+++
T Consensus 260 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~ 339 (560)
T PLN02574 260 SLFVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSLKQVSCGAAPLSGKFIQDF 339 (560)
T ss_pred HHHHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccceEEEEecccCCHHHHHHH
Confidence 7655544 457777777888999999999999999999999999999887543222227899999999999999999998
Q ss_pred hh-c-CCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEe
Q 008342 331 SQ-K-GFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMR 408 (569)
Q Consensus 331 ~~-~-~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~ 408 (569)
.+ + ++++++.||+||++.+.+..... ......+++|.+.+++ +++|+|++++++++.| +.|||+++
T Consensus 340 ~~~~~~~~v~~~YG~tE~~~~~~~~~~~---------~~~~~~~~vG~~~~~~-~v~i~d~~~g~~~~~g--~~Gei~v~ 407 (560)
T PLN02574 340 VQTLPHVDFIQGYGMTESTAVGTRGFNT---------EKLSKYSSVGLLAPNM-QAKVVDWSTGCLLPPG--NCGELWIQ 407 (560)
T ss_pred HHHCCCCcEEecccccccCceeecCCCc---------cccCCCCceeeeCCCc-EEEEEeCCCCcCCCCC--CCeEEEEE
Confidence 74 4 78999999999998654322111 0112347899999999 6999998889999988 78999999
Q ss_pred cCcccccccCCcchhhhhh-cCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeec
Q 008342 409 GSCVMKGYLKNPKANEEAF-ANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARP 487 (569)
Q Consensus 409 ~~~~~~gy~~~~~~~~~~~-~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~ 487 (569)
|++++.||+++++.+...| .+|||+|||+|+++++|.+++.||.+|+|+++|++|++.+||++|.+||.|.+++|++.+
T Consensus 408 g~~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~V~~~~v~~~~ 487 (560)
T PLN02574 408 GPGVMKGYLNNPKATQSTIDKDGWLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPADLEAVLISHPEIIDAAVTAVP 487 (560)
T ss_pred CcchhhhhcCChhHhhhhccCCCCcccceEEEEECCCeEEEEecchhheEECCEEECHHHHHHHHHhCCCcceEEEEccc
Confidence 9999999999999988877 489999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHhcCCcc
Q 008342 488 DERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKEMGPVK 563 (569)
Q Consensus 488 ~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~~~~ 563 (569)
++..|+.++++++..++... ..+++.++++++|+.|++|..+.+++ ||+|++||++|+.|++++.+..+.|
T Consensus 488 ~~~~g~~~~a~v~~~~~~~~-----~~~~l~~~~~~~l~~~~~p~~v~~v~~iP~t~~GKi~r~~L~~~~~~~~~~~ 559 (560)
T PLN02574 488 DKECGEIPVAFVVRRQGSTL-----SQEAVINYVAKQVAPYKKVRKVVFVQSIPKSPAGKILRRELKRSLTNSVSSR 559 (560)
T ss_pred cCCCCcceEEEEEeCCCCCC-----CHHHHHHHHHHhccCcccCcEEEEeeccCCCCcchhhHHHHHHHHhhccccC
Confidence 98888989999987765433 44789999999999999999888776 9999999999999999998877655
No 37
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=4.5e-67 Score=561.66 Aligned_cols=505 Identities=18% Similarity=0.202 Sum_probs=394.5
Q ss_pred HHhhhhCCCceeeeeCC-----eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeecc
Q 008342 27 NRAATLHPTRKSVVYGS-----KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSIN 101 (569)
Q Consensus 27 ~~~a~~~p~~~a~~~~~-----~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~ 101 (569)
+...+.+++++|+++.+ +++||+||.+++.++|++|.++|+++||+|+++++|++++++++|||+++|++++|++
T Consensus 91 ~~~~~~~~~~~a~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~~lA~~~~Gav~vp~~ 170 (652)
T TIGR01217 91 ENLLRAAGTEPALLYVDETHEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVAMLATASVGAIWSSCS 170 (652)
T ss_pred HHHhccCCCCeEEEEECCCCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCeEEEecC
Confidence 33333467899988743 5899999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHhcCCceEEEEcccc---------hHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcch
Q 008342 102 IRLNATVVAFILSHASSAVVIVDQEF---------FSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGA 172 (569)
Q Consensus 102 ~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 172 (569)
+.++.+++.+++++++|+++|+++.. .+.+.++.+.++ ....++.+.......... ....+.
T Consensus 171 ~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~~--~~~~~~ 241 (652)
T TIGR01217 171 PDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELP-------TLRAVVHIPYLGPRETEA--PKIDGA 241 (652)
T ss_pred CCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCC-------CccEEEEEeCCCCccccc--ccccCc
Confidence 99999999999999999999998753 233333333222 234555554321100000 001123
Q ss_pred hhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHH-HHHhHhHhCCCCCcEEEEcCCccchhhH
Q 008342 173 IEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLM-SLNGALIWGMNEGAVFLWTLPMFHGNGW 251 (569)
Q Consensus 173 ~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~-~~~~~~~~~~~~~d~~~~~~p~~~~~g~ 251 (569)
..|++++...............+++++|+|||||||.||+|+++|.+++.. .......++++++|++++..|+.|+.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~- 320 (652)
T TIGR01217 242 LDLEDFTAAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDLGPGDRLFYYTTTGWMMW- 320 (652)
T ss_pred ccHHHHHhcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCCCCCcEEEEeCCcchhhh-
Confidence 557776654221111112345689999999999999999999999986543 344445678899999999999988753
Q ss_pred HHHHHHHHhcceEEEecc----CChHHHHHHHHhcCccEEeehHHHHHHHHccCC--CCCCCCcccceeeeecCCCCCHH
Q 008342 252 SYTWSLAALCGTSICLRQ----VTAKAVYTAIATHGVTHFCAAPVVLNAIANASP--EDTILPLTNVVNVNTAGAPPPPS 325 (569)
Q Consensus 252 ~~~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~--~~~~~~l~~l~~~~~~g~~l~~~ 325 (569)
.+.+.+++.|+++++... .++..++++++++++|++...|.++..+..... ....+ +++||.+++||++++++
T Consensus 321 ~~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~-l~sLr~i~~gGe~l~~~ 399 (652)
T TIGR01217 321 NWLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHD-LSALQCVASTGSPLPPD 399 (652)
T ss_pred HHHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCC-hhheeEEEeecCCCCHH
Confidence 334566677888877742 367899999999999999888888777765421 12233 89999999999999999
Q ss_pred HHHHhhh-c--CCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCce
Q 008342 326 LLFAMSQ-K--GFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTI 402 (569)
Q Consensus 326 ~~~~~~~-~--~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~ 402 (569)
+.+++.+ + +..+.+.||+||+++....... ......+++|.|.+++ +++|+|++ |++++ | +.
T Consensus 400 ~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~----------~~~~~~g~~g~p~~g~-~v~ivd~~-g~~~~-g--~~ 464 (652)
T TIGR01217 400 GFRWVYDEIKADVWLASISGGTDICSCFAGANP----------TLPVHIGEIQAPGLGT-AVQSWDPE-GKPVT-G--EV 464 (652)
T ss_pred HHHHHHHHhCCCceEEeccCHHHHhccccCCCC----------CCCCcCCccCCCcCCC-ceEEECCC-CCCCC-C--Cc
Confidence 9988874 3 3567899999997543322110 0112236788999999 69999986 77774 4 78
Q ss_pred EEEEEecC--cccccccCCcchhh---hhhc--CCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcC
Q 008342 403 GEIVMRGS--CVMKGYLKNPKANE---EAFA--NGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLH 475 (569)
Q Consensus 403 Gel~v~~~--~~~~gy~~~~~~~~---~~~~--~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 475 (569)
|||+++|+ .++.|||++++.+. ..|. +|||+|||+|++|+||+++++||.||+|+++|++|+|.|||++|.+|
T Consensus 465 GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~ 544 (652)
T TIGR01217 465 GELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRMGSAEIYNAVERL 544 (652)
T ss_pred cEEEEecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECCCCcEEEEecccCeEecCCEEcCHHHHHHHHHhC
Confidence 99999996 58899999987553 2222 68999999999999999999999999999999999999999999999
Q ss_pred CCceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHH
Q 008342 476 PLVLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRA 554 (569)
Q Consensus 476 ~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~ 554 (569)
|.|.+++|++.+++..|+.++++|++.++... .+...++|+++++++|+.|++|..+.+++ ||+|++||++|+.|++
T Consensus 545 p~V~eaavvg~~~~~~ge~~~afVv~~~~~~~--~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~r~~Lr~ 622 (652)
T TIGR01217 545 DEVRESLCIGQEQPDGGYRVVLFVHLAPGATL--DDALLDRIKRTIRAGLSPRHVPDEIIEVPGIPHTLTGKRVEVAVKR 622 (652)
T ss_pred CCcceEEEEeeecCCCCEEEEEEEEECCCCCC--CHHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCccChHHHHHH
Confidence 99999999999999999999999998876432 12256789999999999999999999887 9999999999999999
Q ss_pred HHHhc
Q 008342 555 KAKEM 559 (569)
Q Consensus 555 ~~~~~ 559 (569)
.++..
T Consensus 623 ~~~~~ 627 (652)
T TIGR01217 623 VLQGT 627 (652)
T ss_pred HHcCC
Confidence 87644
No 38
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1.1e-67 Score=566.50 Aligned_cols=518 Identities=21% Similarity=0.262 Sum_probs=395.9
Q ss_pred ccCHHHHHHHhhhhCCCceeeeeC-------C--eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHH
Q 008342 19 ALTPLWFINRAATLHPTRKSVVYG-------S--KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFG 89 (569)
Q Consensus 19 ~~~l~~~l~~~a~~~p~~~a~~~~-------~--~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA 89 (569)
-.|++++|++.++++|+++|+... + +.+||+||.++++++|++|.++|+++||+|+|+++|+++|++++||
T Consensus 42 ~~t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA 121 (660)
T PLN02861 42 IDSPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (660)
T ss_pred CCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 358999999999999999999641 1 4799999999999999999999999999999999999999999999
Q ss_pred hhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhh
Q 008342 90 APMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALA 169 (569)
Q Consensus 90 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 169 (569)
|+++|++++|+++.++.+++.+++++++++++|++.+....+.......+ .....++.+++.............
T Consensus 122 ~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~------~~l~~ii~~~~~~~~~~~~~~~~~ 195 (660)
T PLN02861 122 CNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCS------SNLKTIVSFGDVSSEQKEEAEELG 195 (660)
T ss_pred HHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCC------CCCEEEEEECCCChhhhhhhhcCC
Confidence 99999999999999999999999999999999998765443333222111 024556666542110000000001
Q ss_pred cchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhC-----CCCCcEEEEcCC
Q 008342 170 RGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWG-----MNEGAVFLWTLP 244 (569)
Q Consensus 170 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~-----~~~~d~~~~~~p 244 (569)
....+|.+++....... ...+..++++++|+|||||||.||||++||++++.........++ +.++|++++.+|
T Consensus 196 ~~~~~~~~~~~~~~~~~-~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lP 274 (660)
T PLN02861 196 VSCFSWEEFSLMGSLDC-ELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLP 274 (660)
T ss_pred cEEEEHHHHHHhCcccC-CCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECc
Confidence 12345666654432211 112346789999999999999999999999999888766554443 468899999999
Q ss_pred ccchhhHHHHHHHHHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccC-----------------------
Q 008342 245 MFHGNGWSYTWSLAALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANAS----------------------- 301 (569)
Q Consensus 245 ~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~----------------------- 301 (569)
++|.+++...+.++..|+++++. .+++..+++.|++++||+++++|++++.+.+..
T Consensus 275 l~H~~~~~~~~~~l~~G~~v~~~-~~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~ 353 (660)
T PLN02861 275 LAHVYDQVIETYCISKGASIGFW-QGDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKL 353 (660)
T ss_pred HHHHHHHHHHHHHHHhCCEEEEe-CCCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 99999987666666666666555 568899999999999999999999999886410
Q ss_pred -------C----CCCCC---------Cc-ccceeeeecCCCCCHHHHHHhhhcC-CeEecccccccCCCCccccccCCCC
Q 008342 302 -------P----EDTIL---------PL-TNVVNVNTAGAPPPPSLLFAMSQKG-FRITHTYGLTELTGPASVCAWKPEW 359 (569)
Q Consensus 302 -------~----~~~~~---------~l-~~l~~~~~~g~~l~~~~~~~~~~~~-~~i~~~YG~tE~~~~~~~~~~~~~~ 359 (569)
. ..... .+ .++|.+++||+++++++.+.++..+ .++++.||+||+++.++......
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~-- 431 (660)
T PLN02861 354 GNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVEEFLRVTSCSVLSQGYGLTESCGGCFTSIANV-- 431 (660)
T ss_pred HHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHcCCCeeEecchhhhhhceeeccccc--
Confidence 0 00000 01 5789999999999999866554555 47999999999986554322110
Q ss_pred CCCCchhhhhccccCCceeeccCCceeeeC-CCC-cccCCCCCceEEEEEecCcccccccCCcchhhhhhcCCeeecCce
Q 008342 360 DSLPFETQARLNARQGVRTICLDGLDVIDA-RTN-QPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDL 437 (569)
Q Consensus 360 ~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~-~~~-~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~tGD~ 437 (569)
....+++|.|++++ +++|+|. +.| ...+.+ +.|||+++|++++.|||++++.+.+.|.+|||+|||+
T Consensus 432 --------~~~~gsvG~p~p~~-ev~i~d~~~~g~~~~~~~--~~GEi~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDl 500 (660)
T PLN02861 432 --------FSMVGTVGVPMTTI-EARLESVPEMGYDALSDV--PRGEICLRGNTLFSGYHKRQDLTEEVLIDGWFHTGDI 500 (660)
T ss_pred --------CCCCCCccCccCce-EEEEEEccccCcccCCCC--CceeEEEcCCcccccccCCHHHHHhhhhccCcccCce
Confidence 11247899999999 6999983 323 222322 5799999999999999999999999999999999999
Q ss_pred eEEcCCCeEEEecccCceEEe-CceeechHHHHHHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcch---------
Q 008342 438 AVKHPDNYIEIKDRLKDVIIS-GGENISSVEVEKVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADE--------- 507 (569)
Q Consensus 438 ~~~~~~g~l~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~--------- 507 (569)
|++|+||+++|.||.||+|+. +|++|+|.+||++|.+||.|.+++|++.+. ++.++|+|++....-.
T Consensus 501 g~~d~dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l~~~p~V~~a~V~G~~~---~~~~~A~vv~~~~~l~~~~~~~~~~ 577 (660)
T PLN02861 501 GEWQPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYSRCPLIASIWVYGNSF---ESFLVAVVVPDRQALEDWAANNNKT 577 (660)
T ss_pred EEECCCCcEEEEeccccceEcCCCeEEcHHHHHHHHhcCCCeeEEEEEecCC---cceeEEEEEcCHHHHHHHHHHcCCC
Confidence 999999999999999999995 899999999999999999999999999763 3568888887643100
Q ss_pred hhhh------hHHHHHHHHHHh-----cCCCCcCCceEEecc--C-----CCCCCCcccHHHHHHHHHhcC
Q 008342 508 LDKG------KLAEDVSKFCRA-----KMPSYWVPKSVVFAA--L-----PKSATGKIQKHLLRAKAKEMG 560 (569)
Q Consensus 508 ~~~~------~~~~~l~~~~~~-----~l~~~~~p~~i~~~~--l-----P~t~~GKi~r~~l~~~~~~~~ 560 (569)
.+.. .....+.+.+++ .++.+.+++.+.+.+ + .+|+++|+.|+.+.+.|.++-
T Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~i~~~~l~~~~ft~~ng~lT~t~K~~R~~i~~~y~~~I 648 (660)
T PLN02861 578 GDFKSLCKNLKARKYILDELNSTGKKLQLRGFEMLKAIHLEPNPFDIERDLITPTFKLKRPQLLKYYKDCI 648 (660)
T ss_pred CCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCcccCcCCHHHhhhHHHHHHHHHHHH
Confidence 0000 122334444443 488999999988754 6 799999999999999998653
No 39
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.8e-67 Score=546.62 Aligned_cols=480 Identities=19% Similarity=0.286 Sum_probs=409.3
Q ss_pred cCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEee
Q 008342 20 LTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNS 99 (569)
Q Consensus 20 ~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 99 (569)
|++.++|+++++++|+++|+.+.+.++||.||.++++++|++|.+.|. +|++|+|+++|++++++++|||+++|++++|
T Consensus 1 ~~~~~~~~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 79 (487)
T PRK07638 1 MGITKEYKKHASLQPNKIAIKENDRVLTYKDWFESVCKVANWLNEKES-KNKTIAILLENRIEFLQLFAGAAMAGWTCVP 79 (487)
T ss_pred CChHHHHHHHHHhCCCCeEEecCCcEeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCHHHHHHHHHHHHcCeEEEe
Confidence 678999999999999999999999999999999999999999999884 7999999999999999999999999999999
Q ss_pred ccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHhhh
Q 008342 100 INIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEKFL 179 (569)
Q Consensus 100 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l 179 (569)
+++.++.+++.++++.++++++|++......+.. ....++.+++ +.+.+
T Consensus 80 l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~-------------~~~~~~~~~~------------------~~~~~ 128 (487)
T PRK07638 80 LDIKWKQDELKERLAISNADMIVTERYKLNDLPD-------------EEGRVIEIDE------------------WKRMI 128 (487)
T ss_pred cCccCCHHHHHHHHHhCCCCEEEEecccccchhh-------------ccceEEEehh------------------hhhhh
Confidence 9999999999999999999999998765433321 1122332221 11111
Q ss_pred hcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHHHHHHH
Q 008342 180 ETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTWSLAA 259 (569)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~ 259 (569)
....+... ......+++++|+|||||||.||+|.++|++++.........+++.++|+++...|++|..++...+..+.
T Consensus 129 ~~~~~~~~-~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~ 207 (487)
T PRK07638 129 EKYLPTYA-PIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFHMKREDSVLIAGTLVHSLFLYGAISTLY 207 (487)
T ss_pred hhcccccc-ccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCcCCCCEEEEeecchHHHHHHHHHHHHc
Confidence 11111111 11234567899999999999999999999999988888888889999999999999999988877777788
Q ss_pred hcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhhc--CCeE
Q 008342 260 LCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQK--GFRI 337 (569)
Q Consensus 260 ~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~--~~~i 337 (569)
.|+++++.+.+++..+++.++++++|++.++|+++..+.+.... ..+.+.++++|+++++++.+++.+. ++++
T Consensus 208 ~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-----~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~ 282 (487)
T PRK07638 208 VGQTVHLMRKFIPNQVLDKLETENISVMYTVPTMLESLYKENRV-----IENKMKIISSGAKWEAEAKEKIKNIFPYAKL 282 (487)
T ss_pred cCcEEEEcCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCcCc-----CCceeEEEEcCCCCCHHHHHHHHHHcCCCeE
Confidence 89888888889999999999999999999999999999887321 3456678889999999999998854 7899
Q ss_pred ecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCccccccc
Q 008342 338 THTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGYL 417 (569)
Q Consensus 338 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~ 417 (569)
++.||+||++..+..+... ......++|.|++++ .++|+|++ +.+++.| +.|||+++|+.++.||+
T Consensus 283 ~~~YG~tE~~~~~~~~~~~----------~~~~~~~~G~~~~~~-~~~i~d~~-g~~~~~g--~~Gel~v~~~~~~~gy~ 348 (487)
T PRK07638 283 YEFYGASELSFVTALVDEE----------SERRPNSVGRPFHNV-QVRICNEA-GEEVQKG--EIGTVYVKSPQFFMGYI 348 (487)
T ss_pred EEEecCCccCceEEecccc----------cCCCCCCCCcccCCc-EEEEECCC-CCCCCCC--CCeEEEEecccceeeec
Confidence 9999999998655443211 112346889999999 69999986 8888887 78999999999999999
Q ss_pred CCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCCCCceeeE
Q 008342 418 KNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGESPCA 497 (569)
Q Consensus 418 ~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~ 497 (569)
+++..+...+.+|||+|||+++++++|++++.||.+|+|+++|.+|+|.+||++|.++|.|.+++|++.+++..|+.+.+
T Consensus 349 ~~~~~~~~~~~~g~~~TGDl~~~d~~g~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~ 428 (487)
T PRK07638 349 IGGVLARELNADGWMTVRDVGYEDEEGFIYIVGREKNMILFGGINIFPEEIESVLHEHPAVDEIVVIGVPDSYWGEKPVA 428 (487)
T ss_pred CCHHHHhhhccCCcEecCccEeEcCCCeEEEEecCCCeEEeCCEEECHHHHHHHHHhCCCeeeEEEEecCchhcCCeeEE
Confidence 99988887788999999999999999999999999999999999999999999999999999999999999888888888
Q ss_pred EEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHhcC
Q 008342 498 FVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKEMG 560 (569)
Q Consensus 498 ~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~ 560 (569)
+++.. . ..+++.+++++.++.|++|..+++++ ||+|++||++|++|++++.++.
T Consensus 429 ~v~~~----~-----~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~GKv~r~~L~~~~~~~~ 483 (487)
T PRK07638 429 IIKGS----A-----TKQQLKSFCLQRLSSFKIPKEWHFVDEIPYTNSGKIARMEAKSWIENQE 483 (487)
T ss_pred EEECC----C-----CHHHHHHHHHHHhhcccCCcEEEEecccCCCCcccccHHHHHHHHhccc
Confidence 87631 1 45789999999999999999999876 9999999999999999987654
No 40
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=1.6e-66 Score=559.04 Aligned_cols=515 Identities=18% Similarity=0.230 Sum_probs=401.4
Q ss_pred cCHH-HHHHHhhhhCCCceeeeeCC--------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHh
Q 008342 20 LTPL-WFINRAATLHPTRKSVVYGS--------KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGA 90 (569)
Q Consensus 20 ~~l~-~~l~~~a~~~p~~~a~~~~~--------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~ 90 (569)
.++. ++|++++.++|+++|+++.+ +++||+||.+++.++|++|.++|+++||+|+++++|++++++++|||
T Consensus 174 ln~~~~~l~~~~~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~via~LA~ 253 (728)
T PLN03052 174 LNVAECCLTPKPSKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVIIYLAI 253 (728)
T ss_pred eEHHHHHHHHHhccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 4443 46777766789999999864 37999999999999999999999999999999999999999999999
Q ss_pred hhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccch------HHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhh
Q 008342 91 PMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFF------SLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQL 164 (569)
Q Consensus 91 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 164 (569)
+++|++++|+++.++.+++.+++++++++++|+++... +....+.... ...++++....... ..
T Consensus 254 ~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~---------~~~~iv~~~~~~~~-~~ 323 (728)
T PLN03052 254 ILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAK---------APKAIVLPADGKSV-RV 323 (728)
T ss_pred HHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhc---------CCcEEEEeCCCCcc-cc
Confidence 99999999999999999999999999999999987542 1122221111 12344443211100 00
Q ss_pred HHhhhcchhhHHhhhhcCCCC---CCC-CCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEE
Q 008342 165 EYALARGAIEYEKFLETGDPE---FAW-KPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFL 240 (569)
Q Consensus 165 ~~~~~~~~~~~~~~l~~~~~~---~~~-~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~ 240 (569)
........|++++...... ... ......+++++|+|||||||.||+|+++|.+++.........++++++|+++
T Consensus 324 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~d~~~ 401 (728)
T PLN03052 324 --KLREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDIVC 401 (728)
T ss_pred --ccccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCCcEEE
Confidence 0011235677766543211 111 1123568999999999999999999999999877666555567889999999
Q ss_pred EcCCccchhhHHHHHHHHHhcceEEEecc-CChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecC
Q 008342 241 WTLPMFHGNGWSYTWSLAALCGTSICLRQ-VTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAG 319 (569)
Q Consensus 241 ~~~p~~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g 319 (569)
+..|+.|+++....+..++.|+++++... +++..++++++++++|++.++|+++..+.+.......+ +++||.++++|
T Consensus 402 ~~~~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~d-lssLr~i~s~G 480 (728)
T PLN03052 402 WPTNLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLD-WSSIRCFGSTG 480 (728)
T ss_pred ECCCcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCC-hhheeEEEecC
Confidence 99999999998766677778888888753 56678999999999999999999999998765433344 89999999999
Q ss_pred CCCCHHHHHHhhhc-C-CeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCC
Q 008342 320 APPPPSLLFAMSQK-G-FRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPA 397 (569)
Q Consensus 320 ~~l~~~~~~~~~~~-~-~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~ 397 (569)
++++++...++.+. + .++.+.||+||+++.+...... .....+++|.|.+++ +++|+|++ |++++.
T Consensus 481 e~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~----------~~~~~g~~g~p~~g~-~v~v~d~~-g~~v~~ 548 (728)
T PLN03052 481 EASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLL----------QPQAFAAFSTPAMGC-KLFILDDS-GNPYPD 548 (728)
T ss_pred CCCCHHHHHHHHHhcCCCCeEeeccChhhCcccccCCCC----------CCCCCCccccCCCCc-eEEEECCC-CCCCCC
Confidence 99999988777643 4 5799999999998654432210 112347899999999 69999976 899987
Q ss_pred CCCceEEEEEecCc--ccccccCCcchhhhhhc-----CC--eeecCceeEEcCCCeEEEecccCceEEeCceeechHHH
Q 008342 398 DGKTIGEIVMRGSC--VMKGYLKNPKANEEAFA-----NG--WFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEV 468 (569)
Q Consensus 398 ~~~~~Gel~v~~~~--~~~gy~~~~~~~~~~~~-----~g--~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~i 468 (569)
|..+.|||++.++. ...+|+++.. ....|. .| ||+|||+++++++|+++++||+||+|+++|.+|.+.||
T Consensus 549 g~~~~GEL~v~~~~~~~~~~~~~~~~-~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~EI 627 (728)
T PLN03052 549 DAPCTGELALFPLMFGASSTLLNADH-YKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVEI 627 (728)
T ss_pred CCCceEEEEEeCCCCCCCccccCchh-hhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHHHH
Confidence 63236999998653 3345665532 222231 23 89999999999999999999999999999999999999
Q ss_pred HHHHh-cCCCceeeEEEeecCCCCC-ceeeEEEEec--CCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCC
Q 008342 469 EKVLY-LHPLVLEAAVVARPDERWG-ESPCAFVTLK--PEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSA 543 (569)
Q Consensus 469 E~~l~-~~~~v~~~~v~~~~~~~~g-~~~~~~v~~~--~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~ 543 (569)
|++|. .||.|.+++|++.+++..| +.+++||++. ++.. .+.+++.+.+.+.++++|+++.+|..|++++ ||+|+
T Consensus 628 E~~l~~~~p~V~eaaVvg~~d~~~g~e~~~afVvl~~~~g~~-~~~~~L~~~i~~~i~~~l~~~~~p~~i~~v~~lP~T~ 706 (728)
T PLN03052 628 ERVCNAADESVLETAAIGVPPPGGGPEQLVIAAVLKDPPGSN-PDLNELKKIFNSAIQKKLNPLFKVSAVVIVPSFPRTA 706 (728)
T ss_pred HHHHHhcCCCcceEEEEeeecCCCCcEEEEEEEEEecCCCCC-CCHHHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCC
Confidence 99995 7899999999999988766 8899999987 3322 2233467788888999999999999988877 99999
Q ss_pred CCcccHHHHHHHHHhcCC
Q 008342 544 TGKIQKHLLRAKAKEMGP 561 (569)
Q Consensus 544 ~GKi~r~~l~~~~~~~~~ 561 (569)
+||++|+.|++.+.+...
T Consensus 707 sGKi~Rr~Lr~~~~~~~~ 724 (728)
T PLN03052 707 SNKVMRRVLRQQLAQELS 724 (728)
T ss_pred chHHHHHHHHHHHHhhhh
Confidence 999999999999877654
No 41
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.3e-66 Score=549.90 Aligned_cols=511 Identities=28% Similarity=0.422 Sum_probs=431.9
Q ss_pred cccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceE
Q 008342 18 TALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVL 97 (569)
Q Consensus 18 ~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 97 (569)
..+++.+.+++++..+|+++|+.+.++.+||.||.++++++|.+|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 15 ~~~n~~~~~~~~a~~~~~~~a~~~~~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~a~~~~G~~~ 94 (542)
T PRK07786 15 RRQNWVNQLARHALMQPDAPALRFLGNTTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVLAANMLGAIA 94 (542)
T ss_pred cccCHHHHHHHHHHHCCCCeEEEeCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEE
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHh
Q 008342 98 NSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEK 177 (569)
Q Consensus 98 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (569)
+|+++.++.+++..+++.+++++++++..............+ ....++.+++.. ..+..++++
T Consensus 95 vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~----------~~~~~~~~~ 157 (542)
T PRK07786 95 VPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVP-------LLSTVVVAGGSS----------DDSVLGYED 157 (542)
T ss_pred EEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccC-------ccceEEEecCCC----------cccccCHHH
Confidence 999999999999999999999999999876655443322222 234455554321 112245556
Q ss_pred hhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCC-CCCcEEEEcCCccchhhHHHHHH
Q 008342 178 FLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGM-NEGAVFLWTLPMFHGNGWSYTWS 256 (569)
Q Consensus 178 ~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~-~~~d~~~~~~p~~~~~g~~~~~~ 256 (569)
++....... .......+++++++|||||||.||+|.++|+++..........+++ ..++++++..|++|.+|+...+.
T Consensus 158 ~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~ 236 (542)
T PRK07786 158 LLAEAGPAH-APVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLFHIAGIGSMLP 236 (542)
T ss_pred HhhccCCCC-CCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchHHHHHHHHHHH
Confidence 554433222 1223456789999999999999999999999998888777777776 67899999999999999987777
Q ss_pred HHHhcceEEEec--cCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhhc-
Q 008342 257 LAALCGTSICLR--QVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQK- 333 (569)
Q Consensus 257 ~~~~g~~~~~~~--~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~- 333 (569)
.+..|+++++.+ .+++..+++.++++++|++.++|+++..+......... ..++|.+++||+++++++.+++.+.
T Consensus 237 ~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~--~~~lr~i~~gg~~~~~~~~~~~~~~~ 314 (542)
T PRK07786 237 GLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPR--DLALRVLSWGAAPASDTLLRQMAATF 314 (542)
T ss_pred HHHccCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCcc--CcceEEEEECCCCCCHHHHHHHHHHc
Confidence 788888888764 57899999999999999999999999999877544332 2368999999999999999998854
Q ss_pred -CCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcc
Q 008342 334 -GFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCV 412 (569)
Q Consensus 334 -~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~ 412 (569)
+.++++.||+||++++.+.+.... ......++|.|++++ .++|+|++ +..++.+ +.|||+++|+.+
T Consensus 315 ~~~~l~~~YG~tE~~~~~~~~~~~~---------~~~~~~~~G~~~~~~-~~~i~d~~-~~~~~~g--~~Gel~v~g~~~ 381 (542)
T PRK07786 315 PEAQILAAFGQTEMSPVTCMLLGED---------AIRKLGSVGKVIPTV-AARVVDEN-MNDVPVG--EVGEIVYRAPTL 381 (542)
T ss_pred CCCeEEeeecccccccceEecCccc---------ccccCCCccccCCCc-eEEEECCC-CCCCcCC--CceEEEEEChhh
Confidence 889999999999987655432111 112336789999999 69999965 7888877 789999999999
Q ss_pred cccccCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCCCC
Q 008342 413 MKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDERWG 492 (569)
Q Consensus 413 ~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g 492 (569)
+.||+++++.+...|.+|||+|||+++++++|.+++.||.+|+|+++|.++++.+||.+|.++|.|.+++|++.+++..+
T Consensus 382 ~~gy~~~~~~~~~~f~~~~~~TGDl~~~~~~g~~~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~ 461 (542)
T PRK07786 382 MSGYWNNPEATAEAFAGGWFHSGDLVRQDEEGYVWVVDRKKDMIISGGENIYCAEVENVLASHPDIVEVAVIGRADEKWG 461 (542)
T ss_pred hhhhcCCHHHHHHHhhCCcccccceEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCccEEEEEeccCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888878
Q ss_pred ceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHhcCCcccc
Q 008342 493 ESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKEMGPVKMI 565 (569)
Q Consensus 493 ~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~~~~~~ 565 (569)
+.+.++++..+..... ..+++.++++++++.|++|..+.+++ ||+|++||++|++|++++.+..+.+..
T Consensus 462 ~~~~~~v~~~~~~~~~----~~~~l~~~l~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~~~~~~~~~ 531 (542)
T PRK07786 462 EVPVAVAAVRNDDAAL----TLEDLAEFLTDRLARYKHPKALEIVDALPRNPAGKVLKTELRERYGACVNVERR 531 (542)
T ss_pred ceEEEEEEECCCCCCC----CHHHHHHHHHhhccCCCCCCEEEEeccCCCCCcccccHHHHHHHHHhhhchhhc
Confidence 8888888877553221 45789999999999999999999777 999999999999999999988776543
No 42
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.2e-66 Score=561.12 Aligned_cols=511 Identities=19% Similarity=0.241 Sum_probs=402.8
Q ss_pred CHHHHHHHhhhhCCCceeeeeCC-----eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCc
Q 008342 21 TPLWFINRAATLHPTRKSVVYGS-----KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGA 95 (569)
Q Consensus 21 ~l~~~l~~~a~~~p~~~a~~~~~-----~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 95 (569)
++.+.+.++ .+|+++|+++.+ +++||+||.+++.++|++|.+.|+++||+|+++++|++++++++|||+++|+
T Consensus 87 n~~~~~~~~--~~~~~~Al~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~~lA~~~~Ga 164 (655)
T PRK03584 87 NYAENLLRH--RRDDRPAIIFRGEDGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVAMLATASLGA 164 (655)
T ss_pred eHHHHhhcc--CCCCCeEEEEECCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCc
Confidence 444444332 589999999854 6899999999999999999999999999999999999999999999999999
Q ss_pred eEeeccccCCHHHHHHHHhcCCceEEEEcccch---------HHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHH
Q 008342 96 VLNSINIRLNATVVAFILSHASSAVVIVDQEFF---------SLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEY 166 (569)
Q Consensus 96 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 166 (569)
+++|+++.++.+++.+++++++++++|+++... ..+.++...++ ...+++.+....... ..
T Consensus 165 v~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~i~~~~~~~~~---~~ 234 (655)
T PRK03584 165 IWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALP-------SLEHVVVVPYLGPAA---AA 234 (655)
T ss_pred EEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCC-------CccEEEEEecCCCcc---cc
Confidence 999999999999999999999999999987532 22222222222 234555554321100 00
Q ss_pred hhhcchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHH-HHHhHhHhCCCCCcEEEEcCCc
Q 008342 167 ALARGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLM-SLNGALIWGMNEGAVFLWTLPM 245 (569)
Q Consensus 167 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~-~~~~~~~~~~~~~d~~~~~~p~ 245 (569)
........|++++...............+++++|+|||||||.||+|+++|.+++.. .......+++.++|++++..++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 314 (655)
T PRK03584 235 AALPGALLWEDFLAPAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGPGDRFFWYTTC 314 (655)
T ss_pred cccCCcccHHHHhhccccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCCCCEEEEcCCc
Confidence 011234556666652222111122346789999999999999999999999987644 4445556789999999999998
Q ss_pred cchhhHHHHHHHHHhcceEEEecc----CChHHHHHHHHhcCccEEeehHHHHHHHHccCCC--CCCCCcccceeeeecC
Q 008342 246 FHGNGWSYTWSLAALCGTSICLRQ----VTAKAVYTAIATHGVTHFCAAPVVLNAIANASPE--DTILPLTNVVNVNTAG 319 (569)
Q Consensus 246 ~~~~g~~~~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~--~~~~~l~~l~~~~~~g 319 (569)
.|+.+. +.+..++.|+++++... +++..++++++++++|++.++|+++..+.+.... .... +++||.++++|
T Consensus 315 ~~~~~~-~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~-l~sLr~i~~~G 392 (655)
T PRK03584 315 GWMMWN-WLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHD-LSALRTIGSTG 392 (655)
T ss_pred hHHhHH-HHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCC-hhheEEEEEec
Confidence 887543 34556677888777642 5789999999999999999999999998765321 2223 78999999999
Q ss_pred CCCCHHHHHHhhhc---CCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccC
Q 008342 320 APPPPSLLFAMSQK---GFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVP 396 (569)
Q Consensus 320 ~~l~~~~~~~~~~~---~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~ 396 (569)
+++++++.+++.+. +.++++.||+||+++....... ......+++|.|.+++ +++|+|++ |+++
T Consensus 393 e~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~----------~~~~~~g~~g~p~~g~-~~~ivd~~-g~~~- 459 (655)
T PRK03584 393 SPLPPEGFDWVYEHVKADVWLASISGGTDICSCFVGGNP----------LLPVYRGEIQCRGLGM-AVEAWDED-GRPV- 459 (655)
T ss_pred CCCCHHHHHHHHHHhCCCceEEeccChHhhhcccccCCC----------CCCcCCCccCCCcCCc-eeEEECCC-CCCC-
Confidence 99999999998743 5789999999998653322110 0112347789999999 69999976 7777
Q ss_pred CCCCceEEEEEecC--cccccccCCcchhh--hh-h--cCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHH
Q 008342 397 ADGKTIGEIVMRGS--CVMKGYLKNPKANE--EA-F--ANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVE 469 (569)
Q Consensus 397 ~~~~~~Gel~v~~~--~~~~gy~~~~~~~~--~~-~--~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE 469 (569)
.+ +.|||+++|+ +++.|||++++.+. .. | .+|||+|||+|++|+||+++++||.||+|+++|.+|+|.|||
T Consensus 460 ~g--~~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~p~EIE 537 (655)
T PRK03584 460 VG--EVGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIGTAEIY 537 (655)
T ss_pred CC--CceEEEEccCCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECCCCeEEEEeeccCeeecCcEEECHHHHH
Confidence 45 7899999996 78899999887543 11 2 268999999999999999999999999999999999999999
Q ss_pred HHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCccc
Q 008342 470 KVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQ 548 (569)
Q Consensus 470 ~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~ 548 (569)
++|.+||.|.+|+|++.+++..|+.++++|++.++... .+...++|.++++++|+.|++|..+++++ ||+|++||++
T Consensus 538 ~~l~~~p~V~ea~vvg~~~~~~g~~~~a~vv~~~~~~~--~~~~~~~l~~~~~~~L~~~~~P~~i~~v~~lP~t~sGKi~ 615 (655)
T PRK03584 538 RQVEALPEVLDSLVIGQEWPDGDVRMPLFVVLAEGVTL--DDALRARIRTTIRTNLSPRHVPDKIIAVPDIPRTLSGKKV 615 (655)
T ss_pred HHHHhCCCcceEEEEeeEcCCCCEEEEEEEEECCCCCC--cHHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCccch
Confidence 99999999999999999998889999999998876432 12255789999999999999999999887 9999999999
Q ss_pred HHHHHHHHHhcCCc
Q 008342 549 KHLLRAKAKEMGPV 562 (569)
Q Consensus 549 r~~l~~~~~~~~~~ 562 (569)
|+.|++++......
T Consensus 616 r~~lr~~~~~~~~~ 629 (655)
T PRK03584 616 ELPVKKLLHGRPVK 629 (655)
T ss_pred HHHHHHHHcCCCCC
Confidence 99999998765433
No 43
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4e-66 Score=545.61 Aligned_cols=509 Identities=29% Similarity=0.430 Sum_probs=430.6
Q ss_pred cccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceE
Q 008342 18 TALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVL 97 (569)
Q Consensus 18 ~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 97 (569)
...++.++|.+.++++|+++|+++.++.+||.||.+++.++|..|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 9 ~~~~l~~~l~~~a~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~~~G~~~ 88 (523)
T PRK08316 9 RRQTIGDILRRSARRYPDKTALVFGDRSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACARAGAVH 88 (523)
T ss_pred cCCCHHHHHHHHHHHCCCCeEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEE
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHh
Q 008342 98 NSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEK 177 (569)
Q Consensus 98 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (569)
+|+++.++.+++.++++.++++++|++.+....+........ ...+......... ........+.+
T Consensus 89 v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~------~~~~~~~~~~~ 154 (523)
T PRK08316 89 VPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLP--------VDTLILSLVLGGR------EAPGGWLDFAD 154 (523)
T ss_pred EecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcC--------ccceeeeeccccc------ccccchhhHHH
Confidence 999999999999999999999999999887666554332211 0111110000000 01122345555
Q ss_pred hhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHHHHH
Q 008342 178 FLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTWSL 257 (569)
Q Consensus 178 ~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~ 257 (569)
+....... ........+++++++|||||||.||+|.+||.+++.........+++.++++++..+|++|..|+...+..
T Consensus 155 ~~~~~~~~-~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~ 233 (523)
T PRK08316 155 WAEAGSVA-EPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGDMSADDIPLHALPLYHCAQLDVFLGP 233 (523)
T ss_pred HHhcCCCc-cCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCCceEEEccCCchhhhHHHHHHH
Confidence 54433222 12233567899999999999999999999999999888877788899999999999999999998665544
Q ss_pred -HHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhhc--C
Q 008342 258 -AALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQK--G 334 (569)
Q Consensus 258 -~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~--~ 334 (569)
...|+++++.+..++..+++.++++++|++.++|+++..+.+........ ++++|.+++||+.+++++.+.+.+. +
T Consensus 234 ~~~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~l~~~~~gg~~~~~~~~~~~~~~~~~ 312 (523)
T PRK08316 234 YLYVGATNVILDAPDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRD-LSSLRKGYYGASIMPVEVLKELRERLPG 312 (523)
T ss_pred HHhcCceEEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCC-cccceEEEEcCCcCCHHHHHHHHHHcCC
Confidence 45677777777889999999999999999999999999999876554444 7899999999999999999999864 7
Q ss_pred CeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccc
Q 008342 335 FRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMK 414 (569)
Q Consensus 335 ~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~ 414 (569)
+++++.||+||++.++..+.... .....+++|.|.+++ +++|+|++ +++++.+ +.|||+++|+.++.
T Consensus 313 ~~~~~~YG~tE~~~~~~~~~~~~---------~~~~~~~~G~~~~~~-~~~i~~~~-~~~~~~g--~~Gei~v~~~~~~~ 379 (523)
T PRK08316 313 LRFYNCYGQTEIAPLATVLGPEE---------HLRRPGSAGRPVLNV-ETRVVDDD-GNDVAPG--EVGEIVHRSPQLML 379 (523)
T ss_pred CceeeeecccccCccccccCccc---------cccccCCcccCCCCc-EEEEEcCC-CCCCCCC--CcceEEEECCchhh
Confidence 89999999999988766543211 112347889999999 69999966 8888887 78999999999999
Q ss_pred cccCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCCCCce
Q 008342 415 GYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGES 494 (569)
Q Consensus 415 gy~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~ 494 (569)
||+++++.+...|.+|||+|||+|+++++|.+++.||.||+|+++|.+++|.+||+.|.++++|.+++|++.+++..++.
T Consensus 380 ~y~~~~~~~~~~~~~~~~~TGDl~~~~~~g~l~i~gR~~~~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~ 459 (523)
T PRK08316 380 GYWDDPEKTAEAFRGGWFHSGDLGVMDEEGYITVVDRKKDMIKTGGENVASREVEEALYTHPAVAEVAVIGLPDPKWIEA 459 (523)
T ss_pred hhcCCHHHHHHHhhCCCeeccceEEEcCCceEEEecccccEEEeCCeEECHHHHHHHHHhCCChheEeEecccCcccCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988899
Q ss_pred eeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHhcC
Q 008342 495 PCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKEMG 560 (569)
Q Consensus 495 ~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~ 560 (569)
+.++++..++... ..+++.++++++++.+++|..+.+++ +|+|++||++|++|++.|.+..
T Consensus 460 ~~~~v~~~~~~~~-----~~~~l~~~~~~~l~~~~~p~~i~~v~~~p~t~~gKi~r~~l~~~~~~~~ 521 (523)
T PRK08316 460 VTAVVVPKAGATV-----TEDELIAHCRARLAGFKVPKRVIFVDELPRNPSGKILKRELRERYAGAF 521 (523)
T ss_pred EEEEEEECCCCCC-----CHHHHHHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHHHHHHhhc
Confidence 9999998766433 45779999999999999999998776 9999999999999999998654
No 44
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-66 Score=549.78 Aligned_cols=509 Identities=22% Similarity=0.319 Sum_probs=407.6
Q ss_pred cccCHHHHHHHhhhhCCCceeeeeCC--eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCc
Q 008342 18 TALTPLWFINRAATLHPTRKSVVYGS--KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGA 95 (569)
Q Consensus 18 ~~~~l~~~l~~~a~~~p~~~a~~~~~--~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 95 (569)
...++.++|+++++++|+++|+++.+ +.+||+||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|+
T Consensus 14 ~~~~l~~~l~~~a~~~p~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 93 (534)
T PRK05852 14 FGPRIADLVEVAATRLPEAPALVVTADRIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFVVALLAASRADL 93 (534)
T ss_pred hcccHHHHHHHHHHhCCCCcEEEecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCc
Confidence 35579999999999999999998754 5799999999999999999999999999999999999999999999999999
Q ss_pred eEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchh--
Q 008342 96 VLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAI-- 173 (569)
Q Consensus 96 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-- 173 (569)
+++++++.++.+++.++++.++++++|++........... .. .....+.+...... ..+..
T Consensus 94 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~--~~-------~~~~~~~~~~~~~~--------~~~~~~~ 156 (534)
T PRK05852 94 VVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPT--TR-------WWPLTVNVGGDSGP--------SGGTLSV 156 (534)
T ss_pred EEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhcccc--cc-------ccceeeeecccccc--------ccccccc
Confidence 9999999999999999999999999999875432111100 00 01111222111000 00000
Q ss_pred hHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHH
Q 008342 174 EYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSY 253 (569)
Q Consensus 174 ~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~ 253 (569)
.+.... .............++.++++|||||||.||+|.++|+++...+......+++.++|++++..|++|.+|+..
T Consensus 157 ~~~~~~--~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~ 234 (534)
T PRK05852 157 HLDAAT--EPTPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSPRDATVAVMPLYHGHGLIA 234 (534)
T ss_pred cccccc--CCCccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCcceEEEecCcchhHHHHH
Confidence 000000 000001111123467899999999999999999999999988888888889999999999999999999987
Q ss_pred HHHHHHhcceEEEec---cCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCC-CCCCcccceeeeecCCCCCHHHHHH
Q 008342 254 TWSLAALCGTSICLR---QVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPED-TILPLTNVVNVNTAGAPPPPSLLFA 329 (569)
Q Consensus 254 ~~~~~~~g~~~~~~~---~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-~~~~l~~l~~~~~~g~~l~~~~~~~ 329 (569)
.+...+.++..++++ .+++..+++.|+++++|++.++|.++..+.+..... .....+++|.++++|+++++++.++
T Consensus 235 ~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~ 314 (534)
T PRK05852 235 ALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFIRSCSAPLTAETAQA 314 (534)
T ss_pred HHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEEEECCCCCCHHHHHH
Confidence 666666655555542 478899999999999999999999999998865432 1122678999999999999999999
Q ss_pred hhh-cCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEe
Q 008342 330 MSQ-KGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMR 408 (569)
Q Consensus 330 ~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~ 408 (569)
+.+ ++.++++.||+||++..++.+....... ........+..|. .+++ .++++|++ +++++.+ +.|||+++
T Consensus 315 ~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~---~~~~~~~~g~~g~-~~g~-~~~i~d~~-g~~~~~g--~~Gel~v~ 386 (534)
T PRK05852 315 LQTEFAAPVVCAFGMTEATHQVTTTQIEGIGQ---TENPVVSTGLVGR-STGA-QIRIVGSD-GLPLPAG--AVGEVWLR 386 (534)
T ss_pred HHHHhCCChhhccCccccchhhhcCCcccccc---ccCcccccccCCC-CCCC-eEEEECCC-CCCCCCC--CceEEEEe
Confidence 884 5999999999999987665432210000 0000011233343 6788 69999987 7888887 78999999
Q ss_pred cCcccccccCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecC
Q 008342 409 GSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPD 488 (569)
Q Consensus 409 ~~~~~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~ 488 (569)
|+.++.||+++++.+...|.+|||+|||++++++||++++.||.+|+|+.+|.+++|.+||++|.++|+|.+|+|++.++
T Consensus 387 g~~v~~gY~~~~~~t~~~~~~g~~~TGD~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~V~~~~v~g~~~ 466 (534)
T PRK05852 387 GTTVVRGYLGDPTITAANFTDGWLRTGDLGSLSAAGDLSIRGRIKELINRGGEKISPERVEGVLASHPNVMEAAVFGVPD 466 (534)
T ss_pred cCcccchhcCCcccchhhhcCCCcccCceEEEeCCCcEEEEecchhhEEECCEEECHHHHHHHHHhCCCeeeEEEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHh
Q 008342 489 ERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKE 558 (569)
Q Consensus 489 ~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~ 558 (569)
+..++.+.++++..+.... ..++|.++++++|+.+++|..+.+++ ||+|++||++|++|++.+..
T Consensus 467 ~~~g~~~~~~vv~~~~~~~-----~~~~i~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~~~~~ 532 (534)
T PRK05852 467 QLYGEAVAAVIVPRESAPP-----TAEELVQFCRERLAAFEIPASFQEASGLPHTAKGSLDRRAVAEQFGH 532 (534)
T ss_pred cCcCceEEEEEEECCCCCC-----CHHHHHHHHHHhcccccCCeEEEEhhhcCCCCCccccHHHHHHHhcc
Confidence 8888999999887654333 45789999999999999999999877 99999999999999998853
No 45
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5e-66 Score=545.40 Aligned_cols=521 Identities=31% Similarity=0.483 Sum_probs=425.0
Q ss_pred ccccCHHHHHHHhhhhCCCceeeee--CC--eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhh
Q 008342 17 YTALTPLWFINRAATLHPTRKSVVY--GS--KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPM 92 (569)
Q Consensus 17 ~~~~~l~~~l~~~a~~~p~~~a~~~--~~--~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 92 (569)
..++|+.++|+++++++|++++++. .+ +++||+||.++++++|++|.+.|+++||+|+++++|+++++++++||++
T Consensus 7 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la~~~ 86 (542)
T PRK06018 7 DWPLLCHRIIDHAARIHGNREVVTRSVEGPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYGIMG 86 (542)
T ss_pred cCCCCHHHHHHHHHHhCCCceEEEeeccCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHh
Confidence 4578999999999999999999985 23 7899999999999999999999999999999999999999999999999
Q ss_pred cCceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcch
Q 008342 93 AGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGA 172 (569)
Q Consensus 93 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 172 (569)
+|++++|+++.++.+++.++++.+++++++++.+....+.+...... ....++.+.+..... .....+.
T Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~----~~~~~~~ 155 (542)
T PRK06018 87 IGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLP-------SVERYVVLTDAAHMP----QTTLKNA 155 (542)
T ss_pred cCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCC-------CccEEEEeccccccc----ccCcccc
Confidence 99999999999999999999999999999999887776665544333 234444443321100 0011233
Q ss_pred hhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHH--HHHhHhHhCCCCCcEEEEcCCccchhh
Q 008342 173 IEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLM--SLNGALIWGMNEGAVFLWTLPMFHGNG 250 (569)
Q Consensus 173 ~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~--~~~~~~~~~~~~~d~~~~~~p~~~~~g 250 (569)
..|.+++........ .....++++++++|||||||.||+|.+||++.+.. .......+++.++|+++...|++|.++
T Consensus 156 ~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~h~~~ 234 (542)
T PRK06018 156 VAYEEWIAEADGDFA-WKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLFHANS 234 (542)
T ss_pred ccHHHHhccCCcccC-cccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHHHHhh
Confidence 456666655433221 12345678999999999999999999999974322 223344677889999999999999999
Q ss_pred HHHHHHHHHhcceEEEec-cCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHH
Q 008342 251 WSYTWSLAALCGTSICLR-QVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFA 329 (569)
Q Consensus 251 ~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~ 329 (569)
+...+..+..|++.++.. .+++..+++.++++++|++.++|+++..+.+........ ++++|.++++|+++++++.++
T Consensus 235 ~~~~~~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~-~~~lr~~~~~G~~l~~~~~~~ 313 (542)
T PRK06018 235 WGIAFSAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLK-LPHLKMVVCGGSAMPRSMIKA 313 (542)
T ss_pred hHHHHhhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCC-cccceEEEEcCCCCCHHHHHH
Confidence 887777777787776653 578899999999999999999999999998776544444 789999999999999999999
Q ss_pred hhhcCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEec
Q 008342 330 MSQKGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRG 409 (569)
Q Consensus 330 ~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~ 409 (569)
+++.++++++.||+||++.+++.+...+.+.............++|.|.+++ +++|+|++ ++.++.++...|||+++|
T Consensus 314 ~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~-~i~v~d~~-~~~~~~~~~~~Gel~i~g 391 (542)
T PRK06018 314 FEDMGVEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGV-EMKITDDA-GKELPWDGKTFGRLKVRG 391 (542)
T ss_pred HHHhCCCeEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCc-EEEEECCC-CCCCCCCCCceeEEEEec
Confidence 9888899999999999998776654333332222222222345789999999 69999975 888877544689999999
Q ss_pred CcccccccCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCC
Q 008342 410 SCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDE 489 (569)
Q Consensus 410 ~~~~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~ 489 (569)
++++.||++... .....+|||+|||+++++++|.+++.||.+|+|+.+|.++++.+||.++.++|.|.+|+|++.+++
T Consensus 392 ~~~~~gy~~~~~--~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~ 469 (542)
T PRK06018 392 PAVAAAYYRVDG--EILDDDGFFDTGDVATIDAYGYMRITDRSKDVIKSGGEWISSIDLENLAVGHPKVAEAAVIGVYHP 469 (542)
T ss_pred CCcchhhhcCcc--cEecCCcEEEcCCEEEEcCCccEEEEecCCCeEEECCEEECHHHHHHHHHhCCcceeEEEEeccCC
Confidence 999999998321 122247899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHhc
Q 008342 490 RWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKEM 559 (569)
Q Consensus 490 ~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~ 559 (569)
..++.+.+++++.++... ..+++.++++++++.+++|..+.+++ ||+|++||++|++|++++.+.
T Consensus 470 ~~~~~~~~~v~~~~~~~~-----~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~~~~~~ 535 (542)
T PRK06018 470 KWDERPLLIVQLKPGETA-----TREEILKYMDGKIAKWWMPDDVAFVDAIPHTATGKILKTALREQFKDY 535 (542)
T ss_pred CcCceeEEEEEeCCCCCC-----CHHHHHHHHHhhCccccCCcEEEEeccCCCCCcchhhHHHHHHHHhcc
Confidence 888889999988776543 45789999999999999999998777 999999999999999999874
No 46
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=7.4e-67 Score=553.59 Aligned_cols=509 Identities=22% Similarity=0.250 Sum_probs=393.9
Q ss_pred ccCHHHHHHHhhhhCCCceeeeeCCe----------eeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHH
Q 008342 19 ALTPLWFINRAATLHPTRKSVVYGSK----------HYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQF 88 (569)
Q Consensus 19 ~~~l~~~l~~~a~~~p~~~a~~~~~~----------~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~l 88 (569)
.+++.++|++.++++|+++|+++.+. ++||+||.+++.++|++|.+.|+++||+|+++++|++++++++|
T Consensus 5 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~~l 84 (552)
T PRK09274 5 MANIARHLPRAAQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFALTF 84 (552)
T ss_pred hhhHHHHHHHHHHhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHHHH
Confidence 46889999999999999999998664 89999999999999999999999999999999999999999999
Q ss_pred HhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhh
Q 008342 89 GAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYAL 168 (569)
Q Consensus 89 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 168 (569)
||+++|++++|++|.++.+++.+++++++++++|++.+.. ......... ......++.++...
T Consensus 85 a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~--~~~~~~~~~-----~~~~~~~i~~~~~~---------- 147 (552)
T PRK09274 85 ALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAH--LARRLFGWG-----KPSVRRLVTVGGRL---------- 147 (552)
T ss_pred HHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHH--HHHHHhccC-----ccchhheecccccc----------
Confidence 9999999999999999999999999999999999875311 111110000 00122233332210
Q ss_pred hcchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccch
Q 008342 169 ARGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHG 248 (569)
Q Consensus 169 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~ 248 (569)
..+...+.++...............++++++++|||||||.||+|.++|+++..........+++.++++.++.+|++|.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~~~ 227 (552)
T PRK09274 148 LWGGTTLATLLRDGAAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEPGEIDLPTFPLFAL 227 (552)
T ss_pred ccCCccHHHhcccCccccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhCCCCCceeeeccCHHHh
Confidence 01112344443221111111123456899999999999999999999999999888888888899999999999998776
Q ss_pred hhHHHHHHHHHhcceEEEec-------cCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCC
Q 008342 249 NGWSYTWSLAALCGTSICLR-------QVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAP 321 (569)
Q Consensus 249 ~g~~~~~~~~~~g~~~~~~~-------~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~ 321 (569)
+++ ..|++.++.. .+++..+++.|+++++|+++++|++++.|.+........ ++++|.+++||++
T Consensus 228 ~~~-------~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~-~~~lr~~~~gG~~ 299 (552)
T PRK09274 228 FGP-------ALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANGIK-LPSLRRVISAGAP 299 (552)
T ss_pred hhh-------hhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcCCC-CchhhEEEecCCc
Confidence 543 3466665542 357899999999999999999999999998875444334 8899999999999
Q ss_pred CCHHHHHHhhhc---CCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCC--------
Q 008342 322 PPPSLLFAMSQK---GFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDAR-------- 390 (569)
Q Consensus 322 l~~~~~~~~~~~---~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~-------- 390 (569)
+++++.+++++. |+++++.||+||++++++...... ..............++|.|++++ +++|+|+.
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~-~~~~~~~~~~~~~~~vG~~~~~~-~~~ivd~~~~~~~~~~ 377 (552)
T PRK09274 300 VPIAVIERFRAMLPPDAEILTPYGATEALPISSIESREI-LFATRAATDNGAGICVGRPVDGV-EVRIIAISDAPIPEWD 377 (552)
T ss_pred CCHHHHHHHHHHcCCCceEEccccccccceeEeecchhh-hccccccccCCCCcccCccCCCc-eEEEEecccccccccc
Confidence 999999999854 579999999999987554332110 00000000011124689999999 69999863
Q ss_pred CCcccCCCCCceEEEEEecCcccccccCCcchhhhhh---cCC--eeecCceeEEcCCCeEEEecccCceEEeCceeech
Q 008342 391 TNQPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAF---ANG--WFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISS 465 (569)
Q Consensus 391 ~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~---~~g--~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~ 465 (569)
++++++.| +.|||+++|++++.||+++++.+...| .+| ||+|||+|+++++|+++++||.||+|+++|.+|+|
T Consensus 378 ~~~~~~~g--~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~p 455 (552)
T PRK09274 378 DALRLATG--EIGEIVVAGPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDAQGRLWFCGRKAHRVETAGGTLYT 455 (552)
T ss_pred ccccCCCC--CeeEEEEecCcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEccCCcEEEEeccCCeEEECCEEECc
Confidence 35677777 799999999999999999999888766 256 99999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCC--
Q 008342 466 VEVEKVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKS-- 542 (569)
Q Consensus 466 ~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t-- 542 (569)
.+||++|.+||.|.+|+|++.+++. ++.++++|++.++... +.++..+.+.+++.. ++.++.|..+.+++ ||+|
T Consensus 456 ~eIE~~l~~~p~V~~~~v~~~~~~~-~~~~~~~v~~~~~~~~-~~~~l~~~l~~~l~~-~~~~~~~~~~~~~~~lP~t~~ 532 (552)
T PRK09274 456 IPCERIFNTHPGVKRSALVGVGVPG-AQRPVLCVELEPGVAC-SKSALYQELRALAAA-HPHTAGIERFLIHPSFPVDIR 532 (552)
T ss_pred HHHHHHHHhCcccceeEEEEeCCCC-CceEEEEEEccCcccc-chHHHhhhhHHHHHh-cCCCcceeEEeccCCCCcccc
Confidence 9999999999999999999998764 6678888888776433 111123344443333 23446667788777 9999
Q ss_pred CCCcccHHHHHHHHHhc
Q 008342 543 ATGKIQKHLLRAKAKEM 559 (569)
Q Consensus 543 ~~GKi~r~~l~~~~~~~ 559 (569)
++||++|++|++++.+.
T Consensus 533 ~~GKi~r~~L~~~~~~~ 549 (552)
T PRK09274 533 HNAKIFREKLAVWAAKQ 549 (552)
T ss_pred ccccccHHHHHHHHHHh
Confidence 79999999999988765
No 47
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=5.2e-66 Score=548.50 Aligned_cols=525 Identities=28% Similarity=0.439 Sum_probs=427.0
Q ss_pred cccccccCHHHHHHHhhhhCCCceeeee--CCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhh
Q 008342 14 SANYTALTPLWFINRAATLHPTRKSVVY--GSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAP 91 (569)
Q Consensus 14 ~~~~~~~~l~~~l~~~a~~~p~~~a~~~--~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~ 91 (569)
.+...++++.++|++.++++|+++|+++ .++++||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+
T Consensus 10 ~~~~~~~~l~~~l~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~ 89 (559)
T PRK08315 10 DVPLLEQTIGQLLDRTAARYPDREALVYRDQGLRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFATA 89 (559)
T ss_pred cCChhhccHHHHHHHHHHHCCCCeEEEEcCCCeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHH
Confidence 3445567999999999999999999988 45789999999999999999999999999999999999999999999999
Q ss_pred hcCceEeeccccCCHHHHHHHHhcCCceEEEEcccchH-----HHHHHHHHHhhh------cCCCCCcCeEEEecCCCcc
Q 008342 92 MAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFS-----LAEEALKMMEAN------SEGKLKTPHLIVIGDESCD 160 (569)
Q Consensus 92 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-----~~~~~~~~~~~~------~~~~~~~~~~i~~~~~~~~ 160 (569)
++|++++|++|..+.+++..+++.++++++|++..... .+.+....+... .........++.++...
T Consensus 90 ~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 167 (559)
T PRK08315 90 KIGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDEK-- 167 (559)
T ss_pred HhCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeecccC--
Confidence 99999999999999999999999999999999875421 122221111000 00000122333333221
Q ss_pred hhhhHHhhhcchhhHHhhhhcCCCC-----CCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCC
Q 008342 161 SKQLEYALARGAIEYEKFLETGDPE-----FAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNE 235 (569)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~ 235 (569)
..+...+.++....... .........+++++++|||||||.||+|.++|+++...+......+++.+
T Consensus 168 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~ 239 (559)
T PRK08315 168 --------HPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAMKLTE 239 (559)
T ss_pred --------CcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhcCCCC
Confidence 11223444443322110 01112245678999999999999999999999999988888888889999
Q ss_pred CcEEEEcCCccchhhHHHHHHHHHh-cceEEEe-ccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccce
Q 008342 236 GAVFLWTLPMFHGNGWSYTWSLAAL-CGTSICL-RQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVV 313 (569)
Q Consensus 236 ~d~~~~~~p~~~~~g~~~~~~~~~~-g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~ 313 (569)
+|+++..+|++|.+|+...+...+. |++.++. ..+++..+++.++++++|++.++|+++..++......... ++++|
T Consensus 240 ~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~-~~~lr 318 (559)
T PRK08315 240 EDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFD-LSSLR 318 (559)
T ss_pred CceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCC-chhhh
Confidence 9999999999999998766555555 5555434 4678999999999999999999999998888765544444 88999
Q ss_pred eeeecCCCCCHHHHHHhhh-cCC-eEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCC
Q 008342 314 NVNTAGAPPPPSLLFAMSQ-KGF-RITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDART 391 (569)
Q Consensus 314 ~~~~~g~~l~~~~~~~~~~-~~~-~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~ 391 (569)
.++++|+++++++.+.+.+ ++. ++++.||+||++.+++.+..... ......++|.|++++ .++|+|+++
T Consensus 319 ~~~~~G~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~--------~~~~~~~vG~p~~~~-~v~i~d~~~ 389 (559)
T PRK08315 319 TGIMAGSPCPIEVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDP--------LEKRVTTVGRALPHL-EVKIVDPET 389 (559)
T ss_pred eeEecCCCCCHHHHHHHHHHcCCcceeEEEcccccccceeecCcccc--------hhhccCCCCccCCCc-EEEEEcCcc
Confidence 9999999999999998874 454 59999999999876655432211 112347889999999 699999988
Q ss_pred CcccCCCCCceEEEEEecCcccccccCCcchhhhhh-cCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHH
Q 008342 392 NQPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAF-ANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEK 470 (569)
Q Consensus 392 ~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~ 470 (569)
+++++.| +.|||+++|+.++.||++++..+...| .++||+|||+++++++|.++++||.||+++++|.++++.+||+
T Consensus 390 ~~~~~~g--~~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v~~~eIE~ 467 (559)
T PRK08315 390 GETVPRG--EQGELCTRGYSVMKGYWNDPEKTAEAIDADGWMHTGDLAVMDEEGYVNIVGRIKDMIIRGGENIYPREIEE 467 (559)
T ss_pred CCcCCCC--CceEEEEECchhhhhhcCChhHHhhcCCCCCCEEccceEEEcCCceEEEEeeccceEEECCEEEcHHHHHH
Confidence 9999887 789999999999999999998888887 6889999999999999999999999999999999999999999
Q ss_pred HHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccH
Q 008342 471 VLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQK 549 (569)
Q Consensus 471 ~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r 549 (569)
+|.++++|.+++|++.+++..++.+.++|+..++... ..+++.+++++.++.|++|..+.+++ ||+|++||++|
T Consensus 468 ~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~-----~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GK~~r 542 (559)
T PRK08315 468 FLYTHPKIQDVQVVGVPDEKYGEEVCAWIILRPGATL-----TEEDVRDFCRGKIAHYKIPRYIRFVDEFPMTVTGKIQK 542 (559)
T ss_pred HHHhCCCceEEEEEecCCCCCCeEEEEEEEeCCCCCC-----CHHHHHHHHHhhcccccCCcEEEEcccCCCCCCCceeH
Confidence 9999999999999999888878888898887765433 45789999999999999999999877 99999999999
Q ss_pred HHHHHHHHhcCCcccc
Q 008342 550 HLLRAKAKEMGPVKMI 565 (569)
Q Consensus 550 ~~l~~~~~~~~~~~~~ 565 (569)
.+|++++.+....+++
T Consensus 543 ~~L~~~~~~~~~~~~~ 558 (559)
T PRK08315 543 FKMREMMIEELGLQAA 558 (559)
T ss_pred HHHHHHHHhhhchhhc
Confidence 9999998887665543
No 48
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.5e-66 Score=549.51 Aligned_cols=530 Identities=26% Similarity=0.398 Sum_probs=425.6
Q ss_pred cccccCHHHHHHHhhhhCCCceeeeeCC---eeeeHHHHHHHHHHHHHHHHh-cCCCCCCEEEEEcCCchhHHHHHHHhh
Q 008342 16 NYTALTPLWFINRAATLHPTRKSVVYGS---KHYTWHQTYRRCRRFASALSK-LSIGLGTTVSVIAPNVPAMYEAQFGAP 91 (569)
Q Consensus 16 ~~~~~~l~~~l~~~a~~~p~~~a~~~~~---~~~Ty~el~~~~~~la~~L~~-~g~~~g~~V~i~~~~~~~~~~~~lA~~ 91 (569)
.+.++|+.++|++++..+|+++|+++.+ +.+||+||.+++.++|++|.+ .|+++||+|+++++|+++++++++||+
T Consensus 6 ~~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~~ 85 (576)
T PRK05620 6 QDVPLSLTRILEYGSTVHGDTTVTTWGGAEQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAVA 85 (576)
T ss_pred hcCCCcHHHHHHHHHHhCCCceEEEEcCCceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHH
Confidence 4567899999999999999999998753 799999999999999999986 799999999999999999999999999
Q ss_pred hcCceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcc
Q 008342 92 MAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARG 171 (569)
Q Consensus 92 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 171 (569)
++|++++++++.++.+++.++++.++++++|+++.....+......++ ....++.++................
T Consensus 86 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~~~~~~~~~~ 158 (576)
T PRK05620 86 CMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECP-------CVRAVVFIGPSDADSAAAHMPEGIK 158 (576)
T ss_pred hcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCc-------cccEEEEecCcccccchhccccccc
Confidence 999999999999999999999999999999999877666655544433 2344555443221110000011123
Q ss_pred hhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHh--HhHhCCCCCcEEEEcCCccchh
Q 008342 172 AIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNG--ALIWGMNEGAVFLWTLPMFHGN 249 (569)
Q Consensus 172 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~--~~~~~~~~~d~~~~~~p~~~~~ 249 (569)
..+|.+++........ .....++++++++|||||||.||+|.++|+++....... ...+++..++++++.+|++|.+
T Consensus 159 ~~~~~~l~~~~~~~~~-~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~ 237 (576)
T PRK05620 159 VYSYEALLDGRSTVYD-WPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPIYHVL 237 (576)
T ss_pred cccHHHHhhcCCCcCC-CCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCChHHhh
Confidence 4567777754332221 123466899999999999999999999999986554332 3356788999999999999999
Q ss_pred hHHHHHHHHHhcceEEEec-cCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHH
Q 008342 250 GWSYTWSLAALCGTSICLR-QVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLF 328 (569)
Q Consensus 250 g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~ 328 (569)
++...+.++..|+++++.. .+++..+++.++++++|++.++|+++..++......... ..++|.++++|+++++++.+
T Consensus 238 g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~l~~~~~gG~~~~~~~~~ 316 (576)
T PRK05620 238 SWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPE-RMSLQEIYVGGSAVPPILIK 316 (576)
T ss_pred hhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcc-cCceeEEEEcCCCCCHHHHH
Confidence 9987777777788777664 578999999999999999999999999887654332222 46799999999999999999
Q ss_pred Hhhh-cCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEE
Q 008342 329 AMSQ-KGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVM 407 (569)
Q Consensus 329 ~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v 407 (569)
++.+ +++++++.||+||++..++.....+.. ..........++|.+.+++ +++++|+ +..++...++.|||++
T Consensus 317 ~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~---~~~~~~~~~~~~G~~~~~~-~~~i~~~--g~~~~~~~~~~Gel~v 390 (576)
T PRK05620 317 AWEERYGVDVVHVWGMTETSPVGTVARPPSGV---SGEARWAYRVSQGRFPASL-EYRIVND--GQVMESTDRNEGEIQV 390 (576)
T ss_pred HHHHHhCCceeeeccccccccceeeeccCCcc---ccccccccccccCCcCCce-eEEEecC--CccccCCCCCceEEEE
Confidence 9874 489999999999998766544322110 0011111234788888888 6999985 6666543336899999
Q ss_pred ecCcccccccCCcchh----h------------hhh-cCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHH
Q 008342 408 RGSCVMKGYLKNPKAN----E------------EAF-ANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEK 470 (569)
Q Consensus 408 ~~~~~~~gy~~~~~~~----~------------~~~-~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~ 470 (569)
+|++++.||+++++.+ . ..| .+|||+|||++++++||.+++.||.+|+|+.+|.++++.+||.
T Consensus 391 ~g~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~i~~~eIE~ 470 (576)
T PRK05620 391 RGNWVTASYYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRARDVIRSGGEWIYSAQLEN 470 (576)
T ss_pred EcCcccccccCCccccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEechhhhhhcCCEEEcHHHHHH
Confidence 9999999999988776 2 223 3689999999999999999999999999999999999999999
Q ss_pred HHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccH
Q 008342 471 VLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQK 549 (569)
Q Consensus 471 ~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r 549 (569)
+|.+||.|.+++|++.+++..|+.+.+++++.++.... +...++|+++++++|+.|++|..+.+++ ||+|++||++|
T Consensus 471 ~l~~~p~v~~~~vv~~~~~~~g~~~~a~v~~~~~~~~~--~~~~~~l~~~l~~~L~~~~~P~~i~~v~~~P~t~~GKv~r 548 (576)
T PRK05620 471 YIMAAPEVVECAVIGYPDDKWGERPLAVTVLAPGIEPT--RETAERLRDQLRDRLPNWMLPEYWTFVDEIDKTSVGKFDK 548 (576)
T ss_pred HHhcCCCceEEEEEeccCCCcCceeEEEEEecCCCCcc--cccHHHHHHHHHhhCccccCCeEEEEeccCCCCCcccCcH
Confidence 99999999999999999998889999998887664321 1146889999999999999999999877 99999999999
Q ss_pred HHHHHHHHhcCCc
Q 008342 550 HLLRAKAKEMGPV 562 (569)
Q Consensus 550 ~~l~~~~~~~~~~ 562 (569)
++|++++.++...
T Consensus 549 ~~L~~~~~~~~~~ 561 (576)
T PRK05620 549 KDLRQHLADGDFE 561 (576)
T ss_pred HHHHHHHhcCCcc
Confidence 9999999976543
No 49
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.3e-66 Score=538.80 Aligned_cols=491 Identities=31% Similarity=0.460 Sum_probs=413.6
Q ss_pred cCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEee
Q 008342 20 LTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNS 99 (569)
Q Consensus 20 ~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 99 (569)
+++.++++++++.+|+++|+.+.++.+||.||.+++.++|.+|.+.|+++|++|+++++|+++++++++||+++|++++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~a~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 81 (497)
T PRK06145 2 FNLSASIAFHARRTPDRAALVYRDQEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYLGAVFLP 81 (497)
T ss_pred ccHHHHHHHHHHHCCCceEEEECCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEe
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHhhh
Q 008342 100 INIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEKFL 179 (569)
Q Consensus 100 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l 179 (569)
+++.++.+++.++++.+++++++++++....... ....+.++..... .+..+.
T Consensus 82 l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~--------------~~~~~~~~~~~~~-------------~~~~~~ 134 (497)
T PRK06145 82 INYRLAADEVAYILGDAGAKLLLVDEEFDAIVAL--------------ETPKIVIDAAAQA-------------DSRRLA 134 (497)
T ss_pred cccccCHHHHHHHHHhcCCcEEEEccchhhhhhc--------------ccceEEecCcccc-------------hhHHHh
Confidence 9999999999999999999999998765432110 1122223221100 011111
Q ss_pred hcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHH-HHHH
Q 008342 180 ETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYT-WSLA 258 (569)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~-~~~~ 258 (569)
.............++++++++|||||||.||+|.++|.++..........+++..+++++...|++|.+++... +..+
T Consensus 135 -~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l 213 (497)
T PRK06145 135 -QGGLEIPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALGLTASERLLVVGPLYHVGAFDLPGIAVL 213 (497)
T ss_pred -ccCCCCCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHH
Confidence 11111111123466899999999999999999999999988776666677889999999999999999988654 4455
Q ss_pred HhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhhc--CCe
Q 008342 259 ALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQK--GFR 336 (569)
Q Consensus 259 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~--~~~ 336 (569)
..|+++++.+.+++..+++.++++++|++.++|+++..++......... ++++|.+++||+++++++.+++.+. +.+
T Consensus 214 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~-~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~ 292 (497)
T PRK06145 214 WVGGTLRIHREFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRDRFD-LDSLAWCIGGGEKTPESRIRDFTRVFTRAR 292 (497)
T ss_pred hccCEEEECCcCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCccccc-cccceEEEecCCCCCHHHHHHHHHHcCCCc
Confidence 6677777777889999999999999999999999999998876544444 7889999999999999999998854 688
Q ss_pred EecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccccc
Q 008342 337 ITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGY 416 (569)
Q Consensus 337 i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy 416 (569)
+++.||+||+++..+...... .....+++|.|.+++ +++++|++ +++++.+ +.|||+++|++++.||
T Consensus 293 v~~~YG~tE~~~~~~~~~~~~---------~~~~~~~~G~~~~~~-~~~i~~~~-~~~~~~~--~~Gel~v~g~~~~~Gy 359 (497)
T PRK06145 293 YIDAYGLTETCSGDTLMEAGR---------EIEKIGSTGRALAHV-EIRIADGA-GRWLPPN--MKGEICMRGPKVTKGY 359 (497)
T ss_pred eEEeecCcccCCcceeccCcc---------ccccCCCcccCCCCc-eEEEECCC-CCCCCCC--CceEEEEECcchhhhh
Confidence 999999999987554332111 111236789999999 69999975 7888877 7899999999999999
Q ss_pred cCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCCCCceee
Q 008342 417 LKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGESPC 496 (569)
Q Consensus 417 ~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~ 496 (569)
+++++.+...|.++||+|||+++++++|.+++.||.||+|+++|.+++|.+||..|.++|+|.+++|++.+++..|+.+.
T Consensus 360 ~~~~~~~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~ 439 (497)
T PRK06145 360 WKDPEKTAEAFYGDWFRSGDVGYLDEEGFLYLTDRKKDMIISGGENIASSEVERVIYELPEVAEAAVIGVHDDRWGERIT 439 (497)
T ss_pred cCChHHHHHHHhCCCeeccceEEEcCCCcEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEecCCCccCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988888899
Q ss_pred EEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHH
Q 008342 497 AFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAK 557 (569)
Q Consensus 497 ~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~ 557 (569)
+++++.+.... ..++|.++++++|+.+++|..+.+++ ||+|++||++|++|++++.
T Consensus 440 ~~v~~~~~~~~-----~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~GKi~r~~l~~~~~ 496 (497)
T PRK06145 440 AVVVLNPGATL-----TLEALDRHCRQRLASFKVPRQLKVRDELPRNPSGKVLKRVLRDELN 496 (497)
T ss_pred EEEEECCCCCC-----CHHHHHHHHHHhhhcCCCCCEEEEeccCCCCCcccccHHHHHHHhc
Confidence 99988765433 45789999999999999999999877 9999999999999998753
No 50
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-65 Score=541.41 Aligned_cols=509 Identities=28% Similarity=0.364 Sum_probs=426.1
Q ss_pred cccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceE
Q 008342 18 TALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVL 97 (569)
Q Consensus 18 ~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 97 (569)
++.|+.++|.++++++|+++|+++.++.+||.||.+++.++|..|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~G~~~ 89 (524)
T PRK06188 10 SGATYGHLLVSALKRYPDRPALVLGDTRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQLAGLRR 89 (524)
T ss_pred CCccHHHHHHHHHHHCCCCeEEEECCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEE
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccCCHHHHHHHHhcCCceEEEEccc-chHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHH
Q 008342 98 NSINIRLNATVVAFILSHASSAVVIVDQE-FFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYE 176 (569)
Q Consensus 98 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 176 (569)
+++++.++.+++..+++.++++.+++++. ............. ...+++.+....... ..+.
T Consensus 90 v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-----------~~~~ 151 (524)
T PRK06188 90 TALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVP-------SLKHVLTLGPVPDGV-----------DLLA 151 (524)
T ss_pred EecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcC-------CceEEEEeCCccchh-----------hHHH
Confidence 99999999999999999999999999876 3333332222111 223445444321100 0011
Q ss_pred hhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHHHH
Q 008342 177 KFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTWS 256 (569)
Q Consensus 177 ~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~ 256 (569)
... ... .........++++++++|||||||.||+|.++|.++..........+++..++++++.+|++|.+++. .+.
T Consensus 152 ~~~-~~~-~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~-~~~ 228 (524)
T PRK06188 152 AAA-KFG-PAPLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWEWPADPRFLMCTPLSHAGGAF-FLP 228 (524)
T ss_pred hhh-ccC-cccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCcEEEEecCchhhhhHH-HHH
Confidence 111 111 11111123445699999999999999999999999999888888888999999999999999998875 455
Q ss_pred HHHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhh-hcCC
Q 008342 257 LAALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMS-QKGF 335 (569)
Q Consensus 257 ~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~~ 335 (569)
.++.|+++++.+.+++..+++.++++++|++.++|+++..+++........ ++++|.+++||++++++....+. .++.
T Consensus 229 ~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~-l~~lr~~~~gg~~~~~~~~~~~~~~~~~ 307 (524)
T PRK06188 229 TLLRGGTVIVLAKFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRD-LSSLETVYYGASPMSPVRLAEAIERFGP 307 (524)
T ss_pred HHHcCCEEEEcCCCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCC-CcceeEEEEcCCCCCHHHHHHHHHHhCc
Confidence 667788888888889999999999999999999999999998876555444 88999999999999999887776 4588
Q ss_pred eEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCccccc
Q 008342 336 RITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKG 415 (569)
Q Consensus 336 ~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~g 415 (569)
.+++.||+||++..+..+...... ........++|.|++++ .++++|++ +++++.| +.|||+++|+.++.|
T Consensus 308 ~~~~~YG~tE~~~~~~~~~~~~~~-----~~~~~~~~~~G~p~~g~-~v~i~~~~-~~~~~~g--~~Gel~v~~~~~~~g 378 (524)
T PRK06188 308 IFAQYYGQTEAPMVITYLRKRDHD-----PDDPKRLTSCGRPTPGL-RVALLDED-GREVAQG--EVGEICVRGPLVMDG 378 (524)
T ss_pred hhhheeCccccCCceeecCchhcc-----ccccccCCccccccCCc-EEEEEcCC-CCCCCCC--CeeEEEEECcchhhh
Confidence 899999999997666554322110 01123446789999999 59999976 8888887 789999999999999
Q ss_pred ccCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCCCCcee
Q 008342 416 YLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGESP 495 (569)
Q Consensus 416 y~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~ 495 (569)
|++++..+...|.+|||+|||+++++++|.+++.||.+|+++++|.+++|.+||++|.+++.|.+++|++.+++..++.+
T Consensus 379 y~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~ 458 (524)
T PRK06188 379 YWNRPEETAEAFRDGWLHTGDVAREDEDGFYYIVDRKKDMIVTGGFNVFPREVEDVLAEHPAVAQVAVIGVPDEKWGEAV 458 (524)
T ss_pred hcCChHHhhhhhcCCceeecceEEEcCCccEEEEeccccceecCCEEECHHHHHHHHHhCCCeeEEEEEeccCCCcCceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888888899
Q ss_pred eEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHhcCCc
Q 008342 496 CAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKEMGPV 562 (569)
Q Consensus 496 ~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~~~ 562 (569)
.+++++.+.... ..++|.+++++.++.+++|..+.+++ ||+|++||++|++|++.+.+....
T Consensus 459 ~~~v~~~~~~~~-----~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~gKi~r~~L~~~~~~~~~~ 521 (524)
T PRK06188 459 TAVVVLRPGAAV-----DAAELQAHVKERKGSVHAPKQVDFVDSLPLTALGKPDKKALRARYWEGRGR 521 (524)
T ss_pred EEEEEECCCCCC-----CHHHHHHHHHHhcccCCCCcEEEEecCCCCCccccccHHHHHHHHHhhccc
Confidence 999988765443 45789999999999999999999877 999999999999999999766543
No 51
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=1.1e-65 Score=544.04 Aligned_cols=510 Identities=25% Similarity=0.351 Sum_probs=422.3
Q ss_pred cccccCHHHHHHHhhhhCCCceeeeeCC-eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcC
Q 008342 16 NYTALTPLWFINRAATLHPTRKSVVYGS-KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAG 94 (569)
Q Consensus 16 ~~~~~~l~~~l~~~a~~~p~~~a~~~~~-~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 94 (569)
.|.+.|+.+++++.++.+|+++|+++.+ +++||+||++++.++|++|.+.|+++||+|+++++|+++++++++||+++|
T Consensus 19 ~~~~~~l~~~~~~~~~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~~G 98 (547)
T PRK06087 19 YWGDASLADYWQQTARAMPDKIAVVDNHGASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLKVG 98 (547)
T ss_pred CCCCCCHHHHHHHHHHHCCCceEEEcCCCCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcC
Confidence 5677899999999999999999999876 799999999999999999999999999999999999999999999999999
Q ss_pred ceEeeccccCCHHHHHHHHhcCCceEEEEcccch-----HHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhh
Q 008342 95 AVLNSINIRLNATVVAFILSHASSAVVIVDQEFF-----SLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALA 169 (569)
Q Consensus 95 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 169 (569)
++++|+++.++.+++.++++.+++++++++.... +.+......+. ...+++.++.....
T Consensus 99 ~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~--------- 162 (547)
T PRK06087 99 AVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLP-------QLQQIVGVDKLAPA--------- 162 (547)
T ss_pred cEEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCC-------CCcEEEEeCCcCCC---------
Confidence 9999999999999999999999999999976432 22222222222 23455555543211
Q ss_pred cchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchh
Q 008342 170 RGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGN 249 (569)
Q Consensus 170 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 249 (569)
.....+.+++....... .......+++++|+|||||||.||+|.++|.++..........+++.++|++++..|++|.+
T Consensus 163 ~~~~~~~~~~~~~~~~~-~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~ 241 (547)
T PRK06087 163 TSSLSLSQIIADYEPLT-TAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHAT 241 (547)
T ss_pred cCccCHHHHhccCCccc-CCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeEEEecchHHHH
Confidence 11234455544332211 11234678999999999999999999999999988887777778899999999999999999
Q ss_pred hHHHHHHH-HHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHH
Q 008342 250 GWSYTWSL-AALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLF 328 (569)
Q Consensus 250 g~~~~~~~-~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~ 328 (569)
|+...+.. ++.|+++++...+++..+++.++++++|++.++|+.+..+++........ ++++|.+++||+++++++.+
T Consensus 242 g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~-~~~lr~i~~gG~~~~~~~~~ 320 (547)
T PRK06087 242 GFLHGVTAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPAD-LSALRFFLCGGTTIPKKVAR 320 (547)
T ss_pred HHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCC-CCCeEEEEEcCCCCCHHHHH
Confidence 98655544 45567777777889999999999999999999888777777665444334 78999999999999999999
Q ss_pred HhhhcCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEe
Q 008342 329 AMSQKGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMR 408 (569)
Q Consensus 329 ~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~ 408 (569)
.+.+.++++++.||+||++++....... .......+.|.|.+++ .++++|++ +.+++.| +.|||+++
T Consensus 321 ~~~~~~~~l~~~YG~TE~~~~~~~~~~~---------~~~~~~~~~G~~~~~~-~~~i~d~~-~~~~~~g--~~Gel~v~ 387 (547)
T PRK06087 321 ECQQRGIKLLSVYGSTESSPHAVVNLDD---------PLSRFMHTDGYAAAGV-EIKVVDEA-RKTLPPG--CEGEEASR 387 (547)
T ss_pred HHHHcCCcEEEEecccccCCccccCCCc---------chhhcCCcCCccCCCc-eEEEEcCC-CCCCcCC--CcceEEEe
Confidence 8887899999999999998766543211 1111235689999999 69999965 8888877 78999999
Q ss_pred cCcccccccCCcchhhhhh-cCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeec
Q 008342 409 GSCVMKGYLKNPKANEEAF-ANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARP 487 (569)
Q Consensus 409 ~~~~~~gy~~~~~~~~~~~-~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~ 487 (569)
|++++.||+++++.+...| .+|||+|||+++++++|.+++.||.+|+|+.+|.+++|.+||++|.++|.|.++++++.+
T Consensus 388 g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~~ 467 (547)
T PRK06087 388 GPNVFMGYLDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVAMP 467 (547)
T ss_pred cccccccccCCHHHHHHHhCCCCCcCcCceEEECCCCCEEEEecchhhhhcCCEEECHHHHHHHHHhCCCeeEEEEEecC
Confidence 9999999999999888887 478999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHH-hcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHhcC
Q 008342 488 DERWGESPCAFVTLKPEADELDKGKLAEDVSKFCR-AKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKEMG 560 (569)
Q Consensus 488 ~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~-~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~ 560 (569)
++..|+.+.++++..+..... ..+++.+++. +.++.+++|..+.+++ ||+|++||++|++|++.+.+..
T Consensus 468 ~~~~g~~~~~~v~~~~~~~~~----~~~~~~~~~~~~~l~~~~~P~~i~~v~~iP~t~sGK~~r~~l~~~~~~~~ 538 (547)
T PRK06087 468 DERLGERSCAYVVLKAPHHSL----TLEEVVAFFSRKRVAKYKYPEHIVVIDKLPRTASGKIQKFLLRKDIMRRL 538 (547)
T ss_pred CCCcCceEEEEEEECCCCCCC----CHHHHHHHHHhccccccCCCeEEEEeccCCCCCCCcCcHHHHHHHHHHHh
Confidence 888899999999887632221 4467777764 6799999999999877 9999999999999999888763
No 52
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.8e-65 Score=544.42 Aligned_cols=515 Identities=27% Similarity=0.416 Sum_probs=421.2
Q ss_pred ccccCHHHHHHHhhhhCCCceeeeeC--CeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcC
Q 008342 17 YTALTPLWFINRAATLHPTRKSVVYG--SKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAG 94 (569)
Q Consensus 17 ~~~~~l~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 94 (569)
....++.++|++.++++|+++|+++. ++.+||.||.+++.++|++|.+.|+++|++|+++++|++++++++|||+++|
T Consensus 15 ~~~~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a~~~~G 94 (558)
T PRK12583 15 LLTQTIGDAFDATVARFPDREALVVRHQALRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFATARIG 94 (558)
T ss_pred cccCcHHHHHHHHHHHCCCCeEEEecCCCcEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhhC
Confidence 44568999999999999999999884 4789999999999999999999999999999999999999999999999999
Q ss_pred ceEeeccccCCHHHHHHHHhcCCceEEEEcccch-----HHHHHHHHHHhhhc------CCCCCcCeEEEecCCCcchhh
Q 008342 95 AVLNSINIRLNATVVAFILSHASSAVVIVDQEFF-----SLAEEALKMMEANS------EGKLKTPHLIVIGDESCDSKQ 163 (569)
Q Consensus 95 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~~~------~~~~~~~~~i~~~~~~~~~~~ 163 (569)
++++++++.++.+++.+++++++++++|++.... ..+......+.... ........++.......
T Consensus 95 ~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 170 (558)
T PRK12583 95 AILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAPP---- 170 (558)
T ss_pred CEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecCCCC----
Confidence 9999999999999999999999999999986532 22222222211000 00001223333332211
Q ss_pred hHHhhhcchhhHHhhhhcCCCC-----CCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcE
Q 008342 164 LEYALARGAIEYEKFLETGDPE-----FAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAV 238 (569)
Q Consensus 164 ~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~ 238 (569)
.+...|+++....... ........++++++++|||||||.||+|.++|.++...+......+++..+|+
T Consensus 171 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~ 244 (558)
T PRK12583 171 ------PGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLGLTEHDR 244 (558)
T ss_pred ------ccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhCCCCCCe
Confidence 1223344443322111 01112245678999999999999999999999999988888888889999999
Q ss_pred EEEcCCccchhhHHHHHHHHHhcceEEEe--ccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeee
Q 008342 239 FLWTLPMFHGNGWSYTWSLAALCGTSICL--RQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVN 316 (569)
Q Consensus 239 ~~~~~p~~~~~g~~~~~~~~~~g~~~~~~--~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~ 316 (569)
+++..|++|.+|....+..++.+|.++++ ..+++..+++.++++++|++.++|+++..++......... ++++|.++
T Consensus 245 ~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~-~~~lr~i~ 323 (558)
T PRK12583 245 LCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFD-LSSLRTGI 323 (558)
T ss_pred EEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCC-chhheEEE
Confidence 99999999999987766666665555553 3578999999999999999999999998888765444434 78999999
Q ss_pred ecCCCCCHHHHHHhhh-c-CCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcc
Q 008342 317 TAGAPPPPSLLFAMSQ-K-GFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQP 394 (569)
Q Consensus 317 ~~g~~l~~~~~~~~~~-~-~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~ 394 (569)
+||+++++++.+++.+ + +..+++.||+||++++++.+..... ......++|.|.+++ .++|+|++ +.+
T Consensus 324 ~~G~~~~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~--------~~~~~~~vG~p~~~~-~~~i~d~~-~~~ 393 (558)
T PRK12583 324 MAGAPCPIEVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADD--------LERRVETVGRTQPHL-EVKVVDPD-GAT 393 (558)
T ss_pred ecCCCCCHHHHHHHHHHcCCcceeccccccccccceeccCcccc--------cccccCCCCccCCCC-eEEEECCC-CCC
Confidence 9999999999999874 4 4579999999999987665432211 112347889999999 69999998 888
Q ss_pred cCCCCCceEEEEEecCcccccccCCcchhhhhh-cCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHh
Q 008342 395 VPADGKTIGEIVMRGSCVMKGYLKNPKANEEAF-ANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLY 473 (569)
Q Consensus 395 ~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~ 473 (569)
++.+ +.|||+++|+.++.||++++..+...| .++||+|||+|+++++|.+++.||.||+|+++|.+|+|.+||++|.
T Consensus 394 ~~~g--~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~dg~l~i~GR~~~~i~~~G~~v~~~~IE~~l~ 471 (558)
T PRK12583 394 VPRG--EIGELCTRGYSVMKGYWNNPEATAESIDEDGWMHTGDLATMDEQGYVRIVGRSKDMIIRGGENIYPREIEEFLF 471 (558)
T ss_pred CCCC--CeeEEEEEeCccchhhcCChHHHHhhcCCCCCeeccceEEECCCccEEEEecccceeEECCEEeCHHHHHHHHH
Confidence 8887 789999999999999999999888877 7899999999999999999999999999999999999999999999
Q ss_pred cCCCceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHH
Q 008342 474 LHPLVLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLL 552 (569)
Q Consensus 474 ~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l 552 (569)
++|.|.+++|++.++...++.++++++..++... ...+++++++++|+.+++|..+.+++ ||+|++||++|+.|
T Consensus 472 ~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~-----~~~~i~~~~~~~L~~~~~P~~i~~v~~lP~t~sGK~~r~~L 546 (558)
T PRK12583 472 THPAVADVQVFGVPDEKYGEEIVAWVRLHPGHAA-----SEEELREFCKARIAHFKVPRYFRFVDEFPMTVTGKVQKFRM 546 (558)
T ss_pred hCCCeeEEEEEeeecCCCCcEEEEEEEECCCCCC-----CHHHHHHHHHhhcccCcCCcEEEEeccCCCCCCCCccHHHH
Confidence 9999999999999988888889999988765433 45789999999999999999998777 99999999999999
Q ss_pred HHHHHhc
Q 008342 553 RAKAKEM 559 (569)
Q Consensus 553 ~~~~~~~ 559 (569)
+++..+.
T Consensus 547 ~~~~~~~ 553 (558)
T PRK12583 547 REISIEE 553 (558)
T ss_pred HHHHHhh
Confidence 9987764
No 53
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2e-66 Score=563.56 Aligned_cols=477 Identities=19% Similarity=0.233 Sum_probs=394.5
Q ss_pred CHHHHHHHhhhh--CCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEe
Q 008342 21 TPLWFINRAATL--HPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLN 98 (569)
Q Consensus 21 ~l~~~l~~~a~~--~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (569)
|+.++|.+++.. +|+++|++.. ..+||+||+++++++|++|.+.|+++|++|+++++|+++++++++||+++|++++
T Consensus 5 ~~~~~~~~~a~~~~~pd~~a~~~~-~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~aG~~~v 83 (705)
T PRK06060 5 NLAGLLAEQASEAGWYDRPAFYAA-DVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLARGVMAF 83 (705)
T ss_pred CHHHHHHHHHhhccCCCceEEEec-CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEE
Confidence 788999999886 7999999875 4899999999999999999999999999999999999999999999999999999
Q ss_pred eccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHhh
Q 008342 99 SINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEKF 178 (569)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (569)
|++|.++.+++.+++++++++++|++.+....+.. ..++. ...+
T Consensus 84 pi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~---------------~~~~~---------------------~~~~ 127 (705)
T PRK06060 84 LANPELHRDDHALAARNTEPALVVTSDALRDRFQP---------------SRVAE---------------------AAEL 127 (705)
T ss_pred ecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhcc---------------cccch---------------------hhhh
Confidence 99999999999999999999999998654322210 00000 0011
Q ss_pred hhcCCC-CCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhH-hHhCCCCCcEEEEcCCccchhhHHH-HH
Q 008342 179 LETGDP-EFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGA-LIWGMNEGAVFLWTLPMFHGNGWSY-TW 255 (569)
Q Consensus 179 l~~~~~-~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~-~~~~~~~~d~~~~~~p~~~~~g~~~-~~ 255 (569)
+..... ......+..++++++++|||||||.||+|.++|+++........ ..+++.++|++++..|++|.+++.. .+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 207 (705)
T PRK06060 128 MSEAARVAPGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMYFAYGLGNSVW 207 (705)
T ss_pred hhhccccCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCCCcceeEEeccchhhcchhHHHH
Confidence 111000 00011123567899999999999999999999999987766553 4678899999999999999888753 44
Q ss_pred HHHHhcceEEEec-cCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhhc-
Q 008342 256 SLAALCGTSICLR-QVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQK- 333 (569)
Q Consensus 256 ~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~- 333 (569)
..+..|+++++.+ .+++..+...++++++|+++++|+++..+.+..... . ++++|.+++||+++++++.+++.+.
T Consensus 208 ~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~--~-~~slr~i~~gGe~l~~~~~~~~~~~~ 284 (705)
T PRK06060 208 FPLATGGSAVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCSPD--S-FRSLRCVVSAGEALELGLAERLMEFF 284 (705)
T ss_pred HHHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcccc--c-ccceeEEEEecCcCCHHHHHHHHHHc
Confidence 5556677777765 478888999999999999999999999998754322 2 7899999999999999999998854
Q ss_pred -CCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcc
Q 008342 334 -GFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCV 412 (569)
Q Consensus 334 -~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~ 412 (569)
++++++.||+||++..+..+... .....++|+|++++ +++|+|++ +++++.| +.|||+++|+++
T Consensus 285 ~~~~~~~~YG~tE~~~~~~~~~~~-----------~~~~~~iG~p~~~~-~v~i~d~~-g~~~~~g--~~GEl~i~g~~v 349 (705)
T PRK06060 285 GGIPILDGIGSTEVGQTFVSNRVD-----------EWRLGTLGRVLPPY-EIRVVAPD-GTTAGPG--VEGDLWVRGPAI 349 (705)
T ss_pred CCCceEeeeeccccCceEEeccCC-----------CCCcCcccccCCCc-EEEEECCC-CCCCCCC--CceEEEEccchh
Confidence 58999999999998654332210 11236789999999 69999987 8888887 789999999999
Q ss_pred cccccCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCCCC
Q 008342 413 MKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDERWG 492 (569)
Q Consensus 413 ~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g 492 (569)
+.||+++++.+.. .+|||+|||+|++++||+++++||.||+||++|++|++.+||.+|.+|+.|.+++|++.++...+
T Consensus 350 ~~GY~~~~~~~~~--~~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~a~vv~~~~~~~~ 427 (705)
T PRK06060 350 AKGYWNRPDSPVA--NEGWLDTRDRVCIDSDGWVTYRCRADDTEVIGGVNVDPREVERLIIEDEAVAEAAVVAVRESTGA 427 (705)
T ss_pred hhhhhCCCccccc--CCCcEECCeeEEECCCceEEEecccCceEEECCEEECHHHHHHHHHhCCCeeEEEEEeecCccCC
Confidence 9999998876432 47899999999999999999999999999999999999999999999999999999999988888
Q ss_pred ceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHH
Q 008342 493 ESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKA 556 (569)
Q Consensus 493 ~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~ 556 (569)
+.++++++...+.... .....++.++++++|+.|++|..+.+++ ||+|++||++|++|++.+
T Consensus 428 ~~~~a~vv~~~~~~~~--~~~~~~i~~~l~~~L~~~~~P~~i~~v~~iP~t~~GKidr~~L~~~~ 490 (705)
T PRK06060 428 STLQAFLVATSGATID--GSVMRDLHRGLLNRLSAFKVPHRFAVVDRLPRTPNGKLVRGALRKQS 490 (705)
T ss_pred eeEEEEEEeccccCcC--hHHHHHHHHHHHHhCCCCcCCcEEEEeecCCCCcchhhHHHHHHhhc
Confidence 8899999876543221 1145688999999999999999999877 999999999999999865
No 54
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-65 Score=539.48 Aligned_cols=489 Identities=22% Similarity=0.261 Sum_probs=402.1
Q ss_pred ccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhc-CCCCCCEEEEEcCCchhHHHHHHHhhhcCceE
Q 008342 19 ALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKL-SIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVL 97 (569)
Q Consensus 19 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~-g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 97 (569)
+.++.++|++++. ++++|+++.++.+||.||.+++.++|++|.++ |+++|++|+++++|+++++++++||+++|+++
T Consensus 4 ~~~~~~~l~~~a~--~~~~a~~~~~~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~ 81 (529)
T PRK07867 4 APTVAELLLPLAE--DDDRGLYFEDSFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAALSGIVP 81 (529)
T ss_pred cccHHHHHHHhcc--cCCceEEECCcEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHhcCCEE
Confidence 4578999999884 88999999999999999999999999999996 89999999999999999999999999999999
Q ss_pred eeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHh
Q 008342 98 NSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEK 177 (569)
Q Consensus 98 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (569)
+|+++.++.+++.+++++++++++|++++....+.... + ...++.++. ..|.+
T Consensus 82 v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~---~--------~~~~~~~~~----------------~~~~~ 134 (529)
T PRK07867 82 VGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLD---P--------GVRVINVDS----------------PAWAD 134 (529)
T ss_pred EEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhc---c--------CceEEEecc----------------ccHHH
Confidence 99999999999999999999999999987655433221 1 112222221 12444
Q ss_pred hhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHHHHH
Q 008342 178 FLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTWSL 257 (569)
Q Consensus 178 ~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~ 257 (569)
++..............++++++++|||||||.||+|+++|+++..........+++.++|++++.+|++|.+++...+..
T Consensus 135 ~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~ 214 (529)
T PRK07867 135 ELAAHRDAEPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFGLGPDDVCYVSMPLFHSNAVMAGWAV 214 (529)
T ss_pred HhcccCCCCCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhCCCcccEEEEecchhHHHHHHHHHHH
Confidence 44322221112223567899999999999999999999999998888888888899999999999999999998766555
Q ss_pred HH-hcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhhcCCe
Q 008342 258 AA-LCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQKGFR 336 (569)
Q Consensus 258 ~~-~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~~~~ 336 (569)
.+ .|+++++...+++..+++.++++++|++.++|+.+..++......... ..++| +++||+.+++...+..+.+|++
T Consensus 215 ~l~~G~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~~-~~~lr-~~~gg~~~~~~~~~~~~~~g~~ 292 (529)
T PRK07867 215 ALAAGASIALRRKFSASGFLPDVRRYGATYANYVGKPLSYVLATPERPDDA-DNPLR-IVYGNEGAPGDIARFARRFGCV 292 (529)
T ss_pred HHhcCceEEecCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCccccc-ccceE-EEecCCCChHHHHHHHHHhCCc
Confidence 44 455555557789999999999999999999999999888765433222 45677 4568888887764444466999
Q ss_pred EecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCC----------CceEEEE
Q 008342 337 ITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADG----------KTIGEIV 406 (569)
Q Consensus 337 i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~----------~~~Gel~ 406 (569)
+++.||+||+++....+. . ....++|.|.++ ++++|++++.+++.+. +..|||+
T Consensus 293 l~~~YG~TE~~~~~~~~~---~----------~~~~~~g~~~~~---~~i~~~~~~~~~~~g~~~~~~~~~~~~~~Gel~ 356 (529)
T PRK07867 293 VVDGFGSTEGGVAITRTP---D----------TPPGALGPLPPG---VAIVDPDTGTECPPAEDADGRLLNADEAIGELV 356 (529)
T ss_pred EEEeecccccccccccCC---C----------CCCCCcCCCCCC---EEEEECCCCCCCCCCccccccccccCCcceEEE
Confidence 999999999986543221 0 112567888776 6788877788888762 1189999
Q ss_pred E-ecCcccccccCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEe
Q 008342 407 M-RGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVA 485 (569)
Q Consensus 407 v-~~~~~~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~ 485 (569)
+ +|++++.||+++++.+...|.+|||+|||+++++++|.+++.||.||+|+++|.+++|.+||++|.++|+|.+++|++
T Consensus 357 i~~g~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~V~g 436 (529)
T PRK07867 357 NTAGPGGFEGYYNDPEADAERMRGGVYWSGDLAYRDADGYAYFAGRLGDWMRVDGENLGTAPIERILLRYPDATEVAVYA 436 (529)
T ss_pred EecCCcccccccCChHhhhhhhcCCeEeeccEEEEeCCCcEEEeccccCeEEECCEEeCHHHHHHHHHhCCCeeEEEEEe
Confidence 9 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhc--CCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHhc
Q 008342 486 RPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAK--MPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKEM 559 (569)
Q Consensus 486 ~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~--l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~ 559 (569)
.+++..|+.+.+++++.++... ..+++.++++++ |+.+++|..+.+++ ||+|++||++|+.|+++....
T Consensus 437 ~~~~~~g~~~~a~vv~~~~~~~-----~~~~l~~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKv~r~~L~~~~~~~ 508 (529)
T PRK07867 437 VPDPVVGDQVMAALVLAPGAKF-----DPDAFAEFLAAQPDLGPKQWPSYVRVCAELPRTATFKVLKRQLSAEGVDC 508 (529)
T ss_pred ccCCCCCeeEEEEEEECCCCCC-----CHHHHHHHHHhhccCCcccCCeEEEEeeccCCCCCcceeHHHHHHhcCCC
Confidence 9999889999999998776443 457788888765 99999999998777 999999999999999877543
No 55
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.6e-66 Score=554.91 Aligned_cols=516 Identities=17% Similarity=0.186 Sum_probs=398.2
Q ss_pred ccccCHHHHHHHhhhhCCCceeeeeC--C---eeeeHHHHHHHHHHHHHHHHh---cCCCCC-----------CEEEEEc
Q 008342 17 YTALTPLWFINRAATLHPTRKSVVYG--S---KHYTWHQTYRRCRRFASALSK---LSIGLG-----------TTVSVIA 77 (569)
Q Consensus 17 ~~~~~l~~~l~~~a~~~p~~~a~~~~--~---~~~Ty~el~~~~~~la~~L~~---~g~~~g-----------~~V~i~~ 77 (569)
+...|+.++|.++++++|+++|+.+. + +.+||+|+.+++.++|++|.+ +|+++| |+|+|++
T Consensus 58 ~~~~~l~~~l~~~~~~~p~~~Al~~~~~g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~ 137 (746)
T PTZ00342 58 YVYKHIMKLLLEKYKLNNNKIAIVEHSCGEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYG 137 (746)
T ss_pred cccchHHHHHHHHHhhcCCceeEeccCCCCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEc
Confidence 44679999999999999999999873 2 689999999999999999997 499998 9999999
Q ss_pred CCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCC
Q 008342 78 PNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDE 157 (569)
Q Consensus 78 ~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 157 (569)
+|+++|+++.|||+++|++.+|+++.++.+++.++|++++++++|++.+....+.+....++ ..++++.+++.
T Consensus 138 ~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~~~~-------~l~~ii~~~~~ 210 (746)
T PTZ00342 138 SNSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKNELP-------HLKKLIILDTL 210 (746)
T ss_pred CCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhccCC-------CceEEEEECCC
Confidence 99999999999999999999999999999999999999999999998776665554443333 45677777642
Q ss_pred Ccc------------------hhh------------------------------------h---HHhhhcchhhHHhhhh
Q 008342 158 SCD------------------SKQ------------------------------------L---EYALARGAIEYEKFLE 180 (569)
Q Consensus 158 ~~~------------------~~~------------------------------------~---~~~~~~~~~~~~~~l~ 180 (569)
... ... + ..........|+++..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 290 (746)
T PTZ00342 211 IKSKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDDMTK 290 (746)
T ss_pred CcccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHHHHh
Confidence 110 000 0 0000001122333332
Q ss_pred cCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHh--CCCCCcEEEEcCCccchhhHHHHHHHH
Q 008342 181 TGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIW--GMNEGAVFLWTLPMFHGNGWSYTWSLA 258 (569)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~--~~~~~d~~~~~~p~~~~~g~~~~~~~~ 258 (569)
..... ....+..++++++|+|||||||.||||++||+++++.+....... ...+.+++++.+|++|++++...+.++
T Consensus 291 ~~~~~-~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~~~~~~l 369 (746)
T PTZ00342 291 NKTTN-YKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERVIAYLSF 369 (746)
T ss_pred hcccC-CCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHHHHHHHH
Confidence 21111 112234678999999999999999999999999988876554321 233568999999999999998777777
Q ss_pred HhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHcc--------CCCCC-------------------------
Q 008342 259 ALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANA--------SPEDT------------------------- 305 (569)
Q Consensus 259 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~--------~~~~~------------------------- 305 (569)
+.|+++++.+. ++..+++.|++++||++.++|.+++.|.+. +....
T Consensus 370 ~~G~~i~~~~~-~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 448 (746)
T PTZ00342 370 MLGGTINIWSK-DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNGGFSKFLEGI 448 (746)
T ss_pred HcCCEEEEeCC-CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCCcchHHHHH
Confidence 77777776654 889999999999999999999999998752 10000
Q ss_pred --------CCCcccceeeeecCCCCCHHHHHHhhh-cCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCc
Q 008342 306 --------ILPLTNVVNVNTAGAPPPPSLLFAMSQ-KGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGV 376 (569)
Q Consensus 306 --------~~~l~~l~~~~~~g~~l~~~~~~~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 376 (569)
..-.+++|.+++||+++++++.++++. +|+++++.||+||+++.++..... ....+++|.
T Consensus 449 ~~v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g~~i~~gYGlTEt~~~~~~~~~~-----------~~~~gsvG~ 517 (746)
T PTZ00342 449 THISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLLNVNYYQGYGLTETTGPIFVQHAD-----------DNNTESIGG 517 (746)
T ss_pred HHHHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcCCCEEEeeccCcccceeeeccCC-----------CCCcccccC
Confidence 000258999999999999999999984 599999999999998766543211 123478999
Q ss_pred ee-eccCCceeeeCCCCcccCCCCCceEEEEEecCcccccccCCcchhhhhhc-CCeeecCceeEEcCCCeEEEecccCc
Q 008342 377 RT-ICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAFA-NGWFHSGDLAVKHPDNYIEIKDRLKD 454 (569)
Q Consensus 377 ~~-~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~tGD~~~~~~~g~l~~~GR~~d 454 (569)
|+ +++ +++++|.+++.....+ ..|||+++|++++.|||++++.+.+.|. +|||+|||+|++++||+++|.||.+|
T Consensus 518 p~~pg~-e~ki~d~~~~~~~~~~--~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d~dG~l~i~gR~kd 594 (746)
T PTZ00342 518 PISPNT-KYKVRTWETYKATDTL--PKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQINKNGSLTFLDRSKG 594 (746)
T ss_pred cCCCcE-EEEEecccccccCCCC--CceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEECCCCeEEEEccCCC
Confidence 98 999 6999986544444333 4699999999999999999999999995 99999999999999999999999999
Q ss_pred eEE-eCceeechHHHHHHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcch----------------hhh-h-----
Q 008342 455 VII-SGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADE----------------LDK-G----- 511 (569)
Q Consensus 455 ~i~-~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~----------------~~~-~----- 511 (569)
+|+ .+|++|+|.+||++|.+||.|.+|+|++.+.. ..++|+|++....-. .+. +
T Consensus 595 lIkls~Ge~I~p~eIE~~l~~~p~V~~~~VvG~~~~---~~~~Alvv~d~~~~~~~a~~~~~~~~~~i~~~~~~~~~~~~ 671 (746)
T PTZ00342 595 LVKLSQGEYIETDMLNNLYSQISFINFCVVYGDDSM---DGPLAIISVDKYLLFKCLKDDNMLESTGINEKNYLEKLTDE 671 (746)
T ss_pred eEEeCCCEEEchHHHHHHHhcCCCccEEEEEccCCc---cccEEEEECCHHHHHHHHHhcCCccccccCcccHHHHhhhh
Confidence 999 58999999999999999999999999986432 248888887652110 000 0
Q ss_pred -----hHHHHHHHHH-----HhcCCCCcCCceEEecc--CC----CCCCCcccHHHHHHHHHh
Q 008342 512 -----KLAEDVSKFC-----RAKMPSYWVPKSVVFAA--LP----KSATGKIQKHLLRAKAKE 558 (569)
Q Consensus 512 -----~~~~~l~~~~-----~~~l~~~~~p~~i~~~~--lP----~t~~GKi~r~~l~~~~~~ 558 (569)
...+.+.+.+ +..|+.|.+++.|.+.. +- +||+-|+.|+.+.+.|+.
T Consensus 672 ~~~~~~~~~~v~~~~~~~~~~~~l~~~e~i~~~~l~~~~~t~~~~lTpt~KlkR~~v~~~y~~ 734 (746)
T PTZ00342 672 TINNNIYVDYVKGKMLEVYKKTNLNRYNIINDIYLTSKVWDTNNYLTPTFKVKRFYVFKDYAF 734 (746)
T ss_pred hhccHHHHHHHHHHHHHHHHHhCCccceeeeeEEEecCCCCCCCccChhhhhhHHHHHHHHHH
Confidence 0112222222 23599999999988654 32 799999999999998884
No 56
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=1.3e-65 Score=540.70 Aligned_cols=501 Identities=24% Similarity=0.368 Sum_probs=410.9
Q ss_pred cccccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCc
Q 008342 16 NYTALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGA 95 (569)
Q Consensus 16 ~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 95 (569)
-|...++.++++++++.+|+++|+++.++++||+||.++++++|.+|.+.|+++|++|+++++|+++++++++||+++|+
T Consensus 19 ~~~~~~l~~~~~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~ 98 (527)
T TIGR02275 19 YWQDKPLTDILRDQAARYPDAIAIICGNRQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALLKLGI 98 (527)
T ss_pred cccCCcHHHHHHHHHHHCCCceEEEeCCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHcCe
Confidence 46678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeeccccCCHHHHHHHHhcCCceEEEEcccchHH-HHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhh
Q 008342 96 VLNSINIRLNATVVAFILSHASSAVVIVDQEFFSL-AEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIE 174 (569)
Q Consensus 96 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 174 (569)
+++++++..+.+++.++++.+++++++++...... .....+..... ......++...+.... ..
T Consensus 99 ~~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~------------~~ 163 (527)
T TIGR02275 99 APVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSK---LPTLRNIIVAGQTRVE------------AE 163 (527)
T ss_pred EEeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhh---CCcceEEEEecCCCCc------------ch
Confidence 99999999999999999999999999998764211 11111111100 0012333333221100 00
Q ss_pred HHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHH-
Q 008342 175 YEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSY- 253 (569)
Q Consensus 175 ~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~- 253 (569)
+...+....... ......++++++++|||||||.||+|.+||.++..........+.++++|++++.+|++|.+++..
T Consensus 164 ~~~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~P~~h~~~~~~~ 242 (527)
T TIGR02275 164 LFLWLESPAEPV-KFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICWLTQQTRYLCALPAAHNYPLSSP 242 (527)
T ss_pred hhHHhhCcCccc-cCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCCEEEECCChHhhhhhhHH
Confidence 111111111111 112346789999999999999999999999999988887777888999999999999999999864
Q ss_pred -HHHHHHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhh
Q 008342 254 -TWSLAALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQ 332 (569)
Q Consensus 254 -~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~ 332 (569)
.+..+..|+++++.+.+++..+++.++++++|++.++|.++..+.+........ ++++|.+++||+++++++.+++.+
T Consensus 243 ~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~-~~~lr~~~~gG~~l~~~~~~~~~~ 321 (527)
T TIGR02275 243 GALGVFYAGGCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYD-LSSLKLLQVGGAKFSEAAARRVPA 321 (527)
T ss_pred HHHHHHhcCCeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCC-ccceEEEEEcCCCCCHHHHHHHHH
Confidence 556666777777767789999999999999999999999999998776554444 789999999999999999999985
Q ss_pred -cCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceee-ccCCceeeeCCCCcccCCCCCceEEEEEecC
Q 008342 333 -KGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTI-CLDGLDVIDARTNQPVPADGKTIGEIVMRGS 410 (569)
Q Consensus 333 -~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~-~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~ 410 (569)
+|+++++.||+||++....... . .......++|.|++ +. .++++|++ +++++.| +.|||+++|+
T Consensus 322 ~~g~~~~~~YG~tE~~~~~~~~~-~---------~~~~~~~~~G~~~~~~~-~v~i~d~~-g~~~~~g--~~Gei~v~g~ 387 (527)
T TIGR02275 322 VFGCQLQQVFGMAEGLVNYTRLD-D---------PAEIIFTTQGRPMSPDD-EVRVVDDH-GNPVAPG--ETGMLLTRGP 387 (527)
T ss_pred HhCCeEEeeeccCccCccccCCC-C---------ccccccccCCCCCCCCc-eEEEECCC-CCCCCCC--CceEEEecCC
Confidence 5999999999999653322111 0 01122357899985 55 68899876 8888877 7899999999
Q ss_pred cccccccCCcchhhhhh-cCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCC
Q 008342 411 CVMKGYLKNPKANEEAF-ANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDE 489 (569)
Q Consensus 411 ~~~~gy~~~~~~~~~~~-~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~ 489 (569)
+++.||+++++.+...| .+|||+|||+|+++++|++++.||.+|+|+++|.+|+|.+||++|.++|+|.+++|++.+++
T Consensus 388 ~~~~gY~~~~~~~~~~~~~dg~~~TGDl~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~ 467 (527)
T TIGR02275 388 YTFRGYYKAPEHNAAAFDAEGFYYTGDLVRLTPEGYIVVVGRAKDQINRGGEKIAAEEIENLLLAHPAVHDAALVSMPDE 467 (527)
T ss_pred ccchhhcCChhHhHhhcCcCCCEEcCceEEEcCCccEEEEecccceeecCCEEECHHHHHHHHHhCCCceEEEEEecCCc
Confidence 99999999999888887 47999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhc-CCCCcCCceEEecc-CCCCCCCcccHHHHH
Q 008342 490 RWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAK-MPSYWVPKSVVFAA-LPKSATGKIQKHLLR 553 (569)
Q Consensus 490 ~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~-l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~ 553 (569)
..++.+.+++++.++. . ...+|.+++++. ++.|++|..+.+++ ||+|++||++|+.|+
T Consensus 468 ~~~~~~~a~vv~~~~~-~-----~~~~l~~~l~~~~l~~~~~P~~i~~v~~iP~t~sGKv~r~~L~ 527 (527)
T TIGR02275 468 LLGEKSCAFIVVRDPA-L-----KAAQLRRFLRERGLAEYKLPDRVEFIDSLPLTAVGKIDKKALR 527 (527)
T ss_pred ccccEEEEEEEECCCC-C-----CHHHHHHHHHhCCCccccCCCEEEEeccCCCCCccceeHHhcC
Confidence 8889999999876653 2 457899999985 99999999999777 999999999999874
No 57
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.2e-66 Score=554.95 Aligned_cols=506 Identities=21% Similarity=0.258 Sum_probs=401.4
Q ss_pred cccCHHHHHHHhhhhCCCceeeeeCC---------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHH
Q 008342 18 TALTPLWFINRAATLHPTRKSVVYGS---------KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQF 88 (569)
Q Consensus 18 ~~~~l~~~l~~~a~~~p~~~a~~~~~---------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~l 88 (569)
...|+.++|+++++.+|+++|+++.+ +.+||+||.++++++|++|.+. +++||+|+++++|++++++++|
T Consensus 19 ~~~~l~~~l~~~a~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~~~~l 97 (631)
T PRK07769 19 PNTNLVRHVERWAKVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYLIAFF 97 (631)
T ss_pred ccCCHHHHHHHHHHhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHHHHHH
Confidence 45789999999999999999998732 5799999999999999999987 8999999999999999999999
Q ss_pred HhhhcCceEeec-cccCC--HHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhH
Q 008342 89 GAPMAGAVLNSI-NIRLN--ATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLE 165 (569)
Q Consensus 89 A~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 165 (569)
||+++|++++|+ ++..+ .+++.+++++++++++|++.+....+.......+. .....++.++....
T Consensus 98 A~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~------ 166 (631)
T PRK07769 98 GALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPA-----KERPRVIAVDAVPD------ 166 (631)
T ss_pred HHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccc-----cccceEEEcccccc------
Confidence 999999999999 55554 68899999999999999988765544433222210 01123333322100
Q ss_pred HhhhcchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCc
Q 008342 166 YALARGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPM 245 (569)
Q Consensus 166 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~ 245 (569)
... .. .......++++++|+|||||||.||+|++||+++..........+++.++|+++..+|+
T Consensus 167 ------------~~~---~~-~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl 230 (631)
T PRK07769 167 ------------EVG---AT-WVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEGQEGDRGVSWLPF 230 (631)
T ss_pred ------------ccc---cc-cCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcCCCCcceEEEeCCC
Confidence 000 00 00112456899999999999999999999999999888777778889999999999999
Q ss_pred cchhhHHHHHHHHHhcceEEEecc--C--ChHHHHHHHHhcCc---cEEeehHHHHHHHHcc---CCC--CCCCCcccce
Q 008342 246 FHGNGWSYTWSLAALCGTSICLRQ--V--TAKAVYTAIATHGV---THFCAAPVVLNAIANA---SPE--DTILPLTNVV 313 (569)
Q Consensus 246 ~~~~g~~~~~~~~~~g~~~~~~~~--~--~~~~~~~~i~~~~~---t~l~~~P~~~~~l~~~---~~~--~~~~~l~~l~ 313 (569)
+|.+|+...+.+++.|++++++.+ + ++..+++.++++++ +++.++|.++..+... ... .... ++++|
T Consensus 231 ~h~~gl~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~-l~~lr 309 (631)
T PRK07769 231 FHDMGLITVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLD-LSNVK 309 (631)
T ss_pred cCchhhHHHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcc-hhhee
Confidence 999999887778888888887743 4 88999999999986 7899999988766643 111 1223 78999
Q ss_pred eeeecCCCCCHHHHHHhhhc----CC---eEecccccccCCCCccccccCCCCCCC----------------Cchhhhhc
Q 008342 314 NVNTAGAPPPPSLLFAMSQK----GF---RITHTYGLTELTGPASVCAWKPEWDSL----------------PFETQARL 370 (569)
Q Consensus 314 ~~~~~g~~l~~~~~~~~~~~----~~---~i~~~YG~tE~~~~~~~~~~~~~~~~~----------------~~~~~~~~ 370 (569)
.+++||+++++++.+++.+. |+ .+++.||+||+++.++........... ........
T Consensus 310 ~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 389 (631)
T PRK07769 310 GLLNGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVA 389 (631)
T ss_pred eEEeccCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCcee
Confidence 99999999999999988753 33 599999999997655443221110000 00001112
Q ss_pred cccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccccccCCcchhhhhhc------------------CCee
Q 008342 371 NARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAFA------------------NGWF 432 (569)
Q Consensus 371 ~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~------------------~g~~ 432 (569)
..++|.|.++. .++|+|++++++++.| +.|||+++|++++.|||++++.+.+.|. +|||
T Consensus 390 ~~s~G~~~~~~-~~~ivd~~~g~~~~~g--e~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~ 466 (631)
T PRK07769 390 QVSAGKVGVSE-WAVIVDPETASELPDG--QIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWV 466 (631)
T ss_pred EEeCCCcCCCc-EEEEEcCCCCcCCCCC--CEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCee
Confidence 35789999999 6999998889999888 8999999999999999999999988884 3899
Q ss_pred ecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhc-CCCcee--eEEEeecC-------------------CC
Q 008342 433 HSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYL-HPLVLE--AAVVARPD-------------------ER 490 (569)
Q Consensus 433 ~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~-~~~v~~--~~v~~~~~-------------------~~ 490 (569)
+|||+|+++ +|+++|+||.||+|+++|++|+|.|||++|.+ ||.|.+ ++|++.++ +.
T Consensus 467 ~TGDlg~~~-dG~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~~~p~v~~~~~av~~v~d~~~~~~~~~~~~~~~~~~~~~ 545 (631)
T PRK07769 467 RTGDYGVYF-DGELYITGRVKDLVIIDGRNHYPQDLEYTAQEATKALRTGYVAAFSVPANQLPQVVFDDSHAGLKFDPED 545 (631)
T ss_pred eccccccEE-CCEEEEEcccccEEEECCeeeCHHHHHHHHHhccccccCCcEEEEEecccccccccccccccccccccCC
Confidence 999999996 99999999999999999999999999999986 899998 89998887 55
Q ss_pred CCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCC-Cc-CCceEEecc---CCCCCCCcccHHHHHHHHHhcC
Q 008342 491 WGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPS-YW-VPKSVVFAA---LPKSATGKIQKHLLRAKAKEMG 560 (569)
Q Consensus 491 ~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~-~~-~p~~i~~~~---lP~t~~GKi~r~~l~~~~~~~~ 560 (569)
.|+.+++++++.++.... ..++|.++|+++++. ++ .|..+.+++ ||+|++||++|++|++.+.+..
T Consensus 546 ~ge~~~a~v~~~~~~~~~----~~~~l~~~~~~~l~~~~~~~p~~~~~v~~~~lP~t~~GKi~r~~l~~~~~~~~ 616 (631)
T PRK07769 546 TSEQLVIVAERAPGAHKL----DPQPIADDIRAAIAVRHGVTVRDVLLVPAGSIPRTSSGKIARRACRAAYLDGS 616 (631)
T ss_pred CCccEEEEEEecCccccc----cHHHHHHHHHHHHHHHcCCCccEEEEECCCccccCCCcHHHHHHHHHHHHcCC
Confidence 788899999988753221 457899999999885 56 477776653 9999999999999999987553
No 58
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=1.6e-65 Score=541.39 Aligned_cols=502 Identities=29% Similarity=0.400 Sum_probs=409.2
Q ss_pred cccccCHHHHHHHhhhhCCCceeeeeC------CeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHH
Q 008342 16 NYTALTPLWFINRAATLHPTRKSVVYG------SKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFG 89 (569)
Q Consensus 16 ~~~~~~l~~~l~~~a~~~p~~~a~~~~------~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA 89 (569)
-|.+.++.+++++++..+|+++|++.. ++.+||+||++++.++|.+|.+.|+++|++|+++++|+++++++++|
T Consensus 18 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la 97 (538)
T TIGR03208 18 LWRDRTINDHFDAAVANCPDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLA 97 (538)
T ss_pred ccccCcHHHHHHHHHHHCCCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 345678999999999999999999862 36899999999999999999999999999999999999999999999
Q ss_pred hhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccchHH-HHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhh
Q 008342 90 APMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSL-AEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYAL 168 (569)
Q Consensus 90 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 168 (569)
|+++|++++|+++.++.+++.++++.++++++|+++..... .......... .......++.++....
T Consensus 98 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--------- 165 (538)
T TIGR03208 98 CARIGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQS---KLPALRQVVVIDGDGD--------- 165 (538)
T ss_pred HHhcCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhc---cCCcceEEEEecCCCC---------
Confidence 99999999999999999999999999999999998764311 0111111110 0002334555443211
Q ss_pred hcchhhHHhhhhcCCCC--C-----CCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEE
Q 008342 169 ARGAIEYEKFLETGDPE--F-----AWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLW 241 (569)
Q Consensus 169 ~~~~~~~~~~l~~~~~~--~-----~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~ 241 (569)
..++.++...... . .......++++++++|||||||.||+|.++|+++..........++++.+|++++
T Consensus 166 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~ 241 (538)
T TIGR03208 166 ----DSFDRVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLELGGGDVILM 241 (538)
T ss_pred ----cCHHHHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCCCCCCeEEE
Confidence 1233332211100 0 0112246689999999999999999999999999988888888888999999999
Q ss_pred cCCccchhhHHHH-HHHHHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCC
Q 008342 242 TLPMFHGNGWSYT-WSLAALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGA 320 (569)
Q Consensus 242 ~~p~~~~~g~~~~-~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~ 320 (569)
.+|++|..|+... +..+..|+++++...+++..+++.++++++|++.++|.++..+.......... ++++|.+++||+
T Consensus 242 ~~pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~-~~~l~~~~~gG~ 320 (538)
T TIGR03208 242 ASPMAHQTGFMYGLMMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAP-VPSLFTFLCAGA 320 (538)
T ss_pred eCCchhHHHHHHHHHHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCC-CCcceEEEEcCC
Confidence 9999999887654 44556677777667789999999999999999999999999888754333333 789999999999
Q ss_pred CCCHHHHHHhhh-cCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCC
Q 008342 321 PPPPSLLFAMSQ-KGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADG 399 (569)
Q Consensus 321 ~l~~~~~~~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~ 399 (569)
++++++.+++.+ +++++++.||+||++++.+.+.... ......++|.|.+++ .++|+|++ +++++.|
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~---------~~~~~~~~G~~~~g~-~v~i~~~~-~~~~~~g- 388 (538)
T TIGR03208 321 PIPGILVERAWELLGALIVSAWGMTENGAVTVTEPDDA---------LEKASTTDGRPLPGV-EVKVIDAN-GAKLSQG- 388 (538)
T ss_pred CCCHHHHHHHHHHcCCeEEeeeccCcCCCccccCcccc---------hhhccCcccccCCCC-EEEEECCC-CCCCcCC-
Confidence 999999998874 5899999999999987665432110 111235789999999 69999976 8888877
Q ss_pred CceEEEEEecCcccccccCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCce
Q 008342 400 KTIGEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVL 479 (569)
Q Consensus 400 ~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~ 479 (569)
+.|||+++|+.++.||+++++.+.. ..+|||+|||+|+++++|.++++||.+|+|+.+|.+|+|.+||++|.++|.|.
T Consensus 389 -~~Gel~v~g~~~~~gy~~~~~~~~~-~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~ 466 (538)
T TIGR03208 389 -ETGRLLVRGCSNFGGYLKRPHLNST-DAEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIPVVEIENLLYQHPAVA 466 (538)
T ss_pred -CCcEEEEecCcccccccCCcccccc-cCCCceeccceEEECCCCcEEEEeccCceEEECCEEECHHHHHHHHhcCccee
Confidence 7899999999999999999877653 36889999999999999999999999999999999999999999999999999
Q ss_pred eeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHh-cCCCCcCCceEEecc-CCCCCCCcccHHHHH
Q 008342 480 EAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRA-KMPSYWVPKSVVFAA-LPKSATGKIQKHLLR 553 (569)
Q Consensus 480 ~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~-~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~ 553 (569)
+++|++.++...|+.+.+++++.++... ..+++.+++++ +++.+++|..+.+++ ||+|++||++|++|+
T Consensus 467 ~~~v~~~~~~~~g~~~~a~v~~~~~~~~-----~~~~l~~~~~~~~l~~~~~P~~i~~v~~iP~t~~gKv~r~~L~ 537 (538)
T TIGR03208 467 QVAIVAYPDERLGERACAVVVPKPGCTL-----DFAAMVAFLKAQKVALQYIPERLEVVDALPATPAGKIQKFRLR 537 (538)
T ss_pred eEEEEeccCCCCCceEEEEEEECCCCCC-----CHHHHHHHHHhcchhhccCCcEEEEeccCCCCCccccchHhhc
Confidence 9999999988888999999998765433 45678889985 799999999998777 999999999999986
No 59
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=3.2e-65 Score=537.49 Aligned_cols=499 Identities=26% Similarity=0.336 Sum_probs=419.6
Q ss_pred CHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeec
Q 008342 21 TPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSI 100 (569)
Q Consensus 21 ~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 100 (569)
+++++|+++++.+|+++|+.+.++++||+||.+++.++|++|.+.|+++|++|+++++|++++++++|||+++|++++|+
T Consensus 1 ~~~~~~~~~~~~~p~~~a~~~~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l 80 (515)
T TIGR03098 1 LLHHLLEDAAARLPDATALVHHDRTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAGGVFVPI 80 (515)
T ss_pred CHHHHHHHHHHHCCCCeEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCEEEEeC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHhhhh
Q 008342 101 NIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEKFLE 180 (569)
Q Consensus 101 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 180 (569)
++.++.+++..+++.++++++|++.+....+........ ....++.+++...... .......|+++..
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 148 (515)
T TIGR03098 81 NPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCH-------DLRTLILVGEPAHASE-----GGGESPSWPKLLA 148 (515)
T ss_pred CCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhccc-------ccceEEEecCcccccC-----CccccccHHHhhc
Confidence 999999999999999999999998876655544332222 2344555554321100 1122345666554
Q ss_pred cCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHHHHHHHh
Q 008342 181 TGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTWSLAAL 260 (569)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~ 260 (569)
..... ...+...+++++++|||||||.||+|.+||.++..........+++..+|++++.+|++|.+|+...+.++..
T Consensus 149 ~~~~~--~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~ 226 (515)
T TIGR03098 149 LGDAD--PPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLENRPDDRLLAVLPLSFDYGFNQLTTAFYV 226 (515)
T ss_pred ccccc--ccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhCCCcccEEEEECchhhHhHHHHHHHHHHc
Confidence 33221 1123456789999999999999999999999999888877778889999999999999999999888888888
Q ss_pred cceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhhc--CCeEe
Q 008342 261 CGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQK--GFRIT 338 (569)
Q Consensus 261 g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~--~~~i~ 338 (569)
|+++++.+.+++..+++.++++++|++.++|+++..|.+..... .. +.++|.++++|+++++++.+.+++. +.+++
T Consensus 227 G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-~~-~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~ 304 (515)
T TIGR03098 227 GATVVLHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDWPE-SA-APSLRYLTNSGGAMPRATLSRLRSFLPNARLF 304 (515)
T ss_pred CCEEEEcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhcccCC-CC-ccceEEEEecCCcCCHHHHHHHHHHCCCCeEe
Confidence 99988888889999999999999999999999999998753222 22 7889999999999999999999854 78999
Q ss_pred cccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccccccC
Q 008342 339 HTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGYLK 418 (569)
Q Consensus 339 ~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~ 418 (569)
+.||+||++....... .......+++|.|.+++ +++|+|++ +++++.+ +.|||+++|+.++.||++
T Consensus 305 ~~YG~tE~~~~~~~~~----------~~~~~~~~~vG~~~~~~-~~~i~~~~-~~~~~~~--~~Gel~v~g~~~~~gy~~ 370 (515)
T TIGR03098 305 LMYGLTEAFRSTYLPP----------EEVDRRPDSIGKAIPNA-EVLVLRED-GSECAPG--EEGELVHRGALVAMGYWN 370 (515)
T ss_pred eeeccccccceEeccc----------ccccCCCCCcceecCCC-EEEEECCC-CCCCCCC--CceEEEEcCchhhccccC
Confidence 9999999875432211 11122347899999999 69999865 8888776 789999999999999999
Q ss_pred Ccchhhhhhc------------CCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEee
Q 008342 419 NPKANEEAFA------------NGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVAR 486 (569)
Q Consensus 419 ~~~~~~~~~~------------~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~ 486 (569)
+++.+...|. ++|++|||+|+++++|.+++.||.+|+|+.+|.+|+|.+||++|.++|.|.+++|++.
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~ 450 (515)
T TIGR03098 371 DPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPTEVEEVAYATGLVAEAVAFGV 450 (515)
T ss_pred CchhhhhhhhccCCccccccccccceeccceEEEcCCceEEEEeccccceecCCEEeCHHHHHHHHhcCCCeeEEEEEec
Confidence 9888766653 3489999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHH
Q 008342 487 PDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRA 554 (569)
Q Consensus 487 ~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~ 554 (569)
+++..|+.++++++....... ..+++.++++++++.+++|..+++++ ||+|++||++|++|++
T Consensus 451 ~~~~~g~~~~~~~~~~~~~~~-----~~~~l~~~l~~~l~~~~~p~~i~~v~~iP~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 451 PDPTLGQAIVLVVTPPGGEEL-----DRAALLAECRARLPNYMVPALIHVRQALPRNANGKIDRKALAA 514 (515)
T ss_pred cCcccCceEEEEEEeCCCCCC-----CHHHHHHHHHhhCccccCCCEEEEeccCCCCCCCCCcHHHhcc
Confidence 999889999998886554333 45789999999999999999999877 9999999999999964
No 60
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=2.3e-65 Score=540.91 Aligned_cols=502 Identities=28% Similarity=0.411 Sum_probs=413.7
Q ss_pred cccCHHHHHHHhhhhCCCceeeeeC--CeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCc
Q 008342 18 TALTPLWFINRAATLHPTRKSVVYG--SKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGA 95 (569)
Q Consensus 18 ~~~~l~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 95 (569)
..+|+.+++.+++..+|+++|+.+. ++.+||.||.+++.++|+.|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 26 ~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 105 (546)
T PLN02330 26 DKLTLPDFVLQDAELYADKVAFVEAVTGKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYGIVALGIMAAGG 105 (546)
T ss_pred CCCcHHHHHhhhhhcCCCccEEEecCCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCc
Confidence 3578999999999999999999874 57899999999999999999999999999999999999999999999999999
Q ss_pred eEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhH
Q 008342 96 VLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEY 175 (569)
Q Consensus 96 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 175 (569)
+++|+++..+.+++.++++.++++++++++...+.+... ...++.+.+... .....|
T Consensus 106 ~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~-------------~~~~i~~~~~~~----------~~~~~~ 162 (546)
T PLN02330 106 VFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGL-------------GLPVIVLGEEKI----------EGAVNW 162 (546)
T ss_pred EeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhc-------------CCcEEEecCCCC----------CCcccH
Confidence 999999999999999999999999999998866554321 122444433211 122445
Q ss_pred HhhhhcCCCCCC--CCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCC----CCcEEEEcCCccchh
Q 008342 176 EKFLETGDPEFA--WKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMN----EGAVFLWTLPMFHGN 249 (569)
Q Consensus 176 ~~~l~~~~~~~~--~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~----~~d~~~~~~p~~~~~ 249 (569)
.+++........ .......+++++++|||||||.||+|.++|.++....... .+++. ..++++..+|++|.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~p~~h~~ 240 (546)
T PLN02330 163 KELLEAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSS--LFSVGPEMIGQVVTLGLIPFFHIY 240 (546)
T ss_pred HHHHhhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHH--hhccCccccCceEEEEecChHHHH
Confidence 555544322111 1122456789999999999999999999999987765432 22332 346789999999999
Q ss_pred hHHHHHH-HHHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcc--cceeeeecCCCCCHHH
Q 008342 250 GWSYTWS-LAALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLT--NVVNVNTAGAPPPPSL 326 (569)
Q Consensus 250 g~~~~~~-~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~--~l~~~~~~g~~l~~~~ 326 (569)
|+...+. .+..|+++++...+++..+++.++++++|.+.++|+++..+.......... +. .+|.++++|+++++++
T Consensus 241 g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~-~~~~~l~~i~~~g~~l~~~~ 319 (546)
T PLN02330 241 GITGICCATLRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFD-LSKLKLQAIMTAAAPLAPEL 319 (546)
T ss_pred HHHHHHHHHhhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccc-cchheeeeEEEcCCcCCHHH
Confidence 8865444 445677777778899999999999999999999999999998765433332 33 5789999999999999
Q ss_pred HHHhhh-c-CCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEE
Q 008342 327 LFAMSQ-K-GFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGE 404 (569)
Q Consensus 327 ~~~~~~-~-~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Ge 404 (569)
.+++.+ + ++++++.||+||++.+...+..... ........++|.|++++ +++++|+++++++|.| +.||
T Consensus 320 ~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~------~~~~~~~~~vG~~~~~~-~v~i~d~~~~~~~p~g--~~Ge 390 (546)
T PLN02330 320 LTAFEAKFPGVQVQEAYGLTEHSCITLTHGDPEK------GHGIAKKNSVGFILPNL-EVKFIDPDTGRSLPKN--TPGE 390 (546)
T ss_pred HHHHHHHcCCCeEEecccccccccceecCCCccc------cccccccCccccccCCc-EEEEEeCCCCccCCCC--CceE
Confidence 999984 4 8999999999999865543321110 00112236799999999 6999998889999988 7899
Q ss_pred EEEecCcccccccCCcchhhhhh-cCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEE
Q 008342 405 IVMRGSCVMKGYLKNPKANEEAF-ANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAV 483 (569)
Q Consensus 405 l~v~~~~~~~gy~~~~~~~~~~~-~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v 483 (569)
|+++|+.++.||++++..+...+ .+|||+|||++++++||.+++.||.+|+|+++|.+|+|.+||.+|.+++.|.+++|
T Consensus 391 l~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v 470 (546)
T PLN02330 391 LCVRSQCVMQGYYNNKEETDRTIDEDGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAV 470 (546)
T ss_pred EEEecchhhhhhccCccchhhhccCCCceecccEEEEeCCCcEEEEechHHhhhcCCEEECHHHHHHHHHhCCchheEEE
Confidence 99999999999999998888777 47999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHhc
Q 008342 484 VARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKEM 559 (569)
Q Consensus 484 ~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~ 559 (569)
++.+++..|+.+.++++..++... ..+++.++++++|+.+++|..+.+++ ||+|++||++|++|++++...
T Consensus 471 ~~~~~~~~g~~~~a~v~~~~~~~~-----~~~~l~~~~~~~l~~~~~p~~~~~v~~iP~t~~GK~~r~~L~~~~~~~ 542 (546)
T PLN02330 471 VPLPDEEAGEIPAACVVINPKAKE-----SEEDILNFVAANVAHYKKVRVVQFVDSIPKSLSGKIMRRLLKEKMLSI 542 (546)
T ss_pred EeccccccCceeEEEEEECCCCCC-----CHHHHHHHHHHhcccccCceEEEEeccCCCCCCcceeHHHHHHHHHhh
Confidence 999998889999999988765433 45789999999999999999888766 999999999999999998765
No 61
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=1e-64 Score=532.11 Aligned_cols=496 Identities=24% Similarity=0.327 Sum_probs=416.8
Q ss_pred ccCHHHHHHHhhhhCCCceeeee-CCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceE
Q 008342 19 ALTPLWFINRAATLHPTRKSVVY-GSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVL 97 (569)
Q Consensus 19 ~~~l~~~l~~~a~~~p~~~a~~~-~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 97 (569)
..++.+++.+.+ .+|+++|+.+ .++.+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 2 ~~~l~~~~~~~~-~~~~~~a~~~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~G~~~ 80 (504)
T PRK07514 2 NNNLFDALRAAF-ADRDAPFIETPDGLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRAGAVF 80 (504)
T ss_pred CccHHHHHHHHh-hCCCCeEEEeCCCCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEE
Confidence 357899999999 9999999988 56889999999999999999999999999999999999999999999999999999
Q ss_pred eeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHh
Q 008342 98 NSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEK 177 (569)
Q Consensus 98 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (569)
+|+++.++.+++..+++.++++++++++.....+....... ....++.++.... ..+.+
T Consensus 81 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~-------------~~~~~ 139 (504)
T PRK07514 81 LPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAA--------GAPHVETLDADGT-------------GSLLE 139 (504)
T ss_pred EECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhcc--------CCceEEEecCCCc-------------ccHHH
Confidence 99999999999999999999999999987665554432221 1233444433211 01111
Q ss_pred hhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHHH-H
Q 008342 178 FLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTW-S 256 (569)
Q Consensus 178 ~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~-~ 256 (569)
....... .........+++++++|||||||.||+|.++|.++...+......+++.++|++++..|++|..|+.... .
T Consensus 140 ~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~ 218 (504)
T PRK07514 140 AAAAAPD-DFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTPDDVLIHALPIFHTHGLFVATNV 218 (504)
T ss_pred hhhhcCc-ccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCccEEEEecchHHHHHHHHHHHH
Confidence 1111111 1112234678999999999999999999999999999888877788999999999999999999986544 4
Q ss_pred HHHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhh-cCC
Q 008342 257 LAALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQ-KGF 335 (569)
Q Consensus 257 ~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~-~~~ 335 (569)
....|+++++.+..++..+++.+. ++|++.++|.++..++......... ++++|.+++||+++++++.+.+.+ .+.
T Consensus 219 ~l~~G~~~~~~~~~~~~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~~~~~-~~~lr~~~~gg~~~~~~~~~~~~~~~~~ 295 (504)
T PRK07514 219 ALLAGASMIFLPKFDPDAVLALMP--RATVMMGVPTFYTRLLQEPRLTREA-AAHMRLFISGSAPLLAETHREFQERTGH 295 (504)
T ss_pred HHhcCcEEEECCCCCHHHHHHHHH--hheeeecHHHHHHHHHcCCCCCccc-ccceeeEEecCCCCCHHHHHHHHHHhCC
Confidence 455677777777789999999993 7999999999999998775444444 789999999999999999999985 488
Q ss_pred eEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCccccc
Q 008342 336 RITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKG 415 (569)
Q Consensus 336 ~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~g 415 (569)
++++.||+||++....... .......++|.|.+++ +++|+|++++++++.| +.|||+++|+.++.|
T Consensus 296 ~~~~~YG~tE~~~~~~~~~-----------~~~~~~~~~G~~~~~~-~v~i~d~~~~~~~~~g--~~Gel~i~~~~~~~g 361 (504)
T PRK07514 296 AILERYGMTETNMNTSNPY-----------DGERRAGTVGFPLPGV-SLRVTDPETGAELPPG--EIGMIEVKGPNVFKG 361 (504)
T ss_pred cceeecccccccccccCCc-----------cccccCcccccCCCCc-EEEEEECCCCCCCCCC--CceEEEEecCCcccc
Confidence 9999999999975443211 0111236789999999 6999997889999987 789999999999999
Q ss_pred ccCCcchhhhhhc-CCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCCCCce
Q 008342 416 YLKNPKANEEAFA-NGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGES 494 (569)
Q Consensus 416 y~~~~~~~~~~~~-~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~ 494 (569)
|++++..+...|. ++||+|||+++++++|.+++.||.||+|+++|.+++|.+||..+.++++|.+++|++.+++..++.
T Consensus 362 y~~~~~~~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~ 441 (504)
T PRK07514 362 YWRMPEKTAEEFRADGFFITGDLGKIDERGYVHIVGRGKDLIISGGYNVYPKEVEGEIDELPGVVESAVIGVPHPDFGEG 441 (504)
T ss_pred ccCCchhhhhhcccCCCeeecceEEEcCCccEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEeCCCCCcCce
Confidence 9999999988886 889999999999999999999999999999999999999999999999999999999998888888
Q ss_pred eeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHhc
Q 008342 495 PCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKEM 559 (569)
Q Consensus 495 ~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~ 559 (569)
++++++..++... ..+++.+.++++++.+++|..+++++ +|+|++||++|++|++++.+.
T Consensus 442 ~~~~~~~~~~~~~-----~~~~l~~~~~~~l~~~~~p~~i~~v~~~p~t~~gK~~r~~l~~~~~~~ 502 (504)
T PRK07514 442 VTAVVVPKPGAAL-----DEAAILAALKGRLARFKQPKRVFFVDELPRNTMGKVQKNLLREQYADL 502 (504)
T ss_pred EEEEEEECCCCCC-----CHHHHHHHHHhhcccCCCCcEEEEeccCCCCCCcceeHHHHHHHHHhh
Confidence 9999988765543 45789999999999999999998777 999999999999999988764
No 62
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=9.8e-65 Score=533.49 Aligned_cols=499 Identities=23% Similarity=0.361 Sum_probs=409.0
Q ss_pred cCHHHHHHHhhhhCCCceeeeeCC-----eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcC
Q 008342 20 LTPLWFINRAATLHPTRKSVVYGS-----KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAG 94 (569)
Q Consensus 20 ~~l~~~l~~~a~~~p~~~a~~~~~-----~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 94 (569)
.++.+++++.++++|+++|+++.+ +.+||.||.++++++|++|.++|+++||+|+++++|+.++++++|||+++|
T Consensus 7 ~~l~~~~~~~a~~~p~~~a~~~~~~~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~~G 86 (517)
T PRK08008 7 QHLRQMWDDLADVYGHKTALIFESSGGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAKIG 86 (517)
T ss_pred ccHHHHHHHHHHHCCCceEEEcccCCCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence 479999999999999999999865 789999999999999999999999999999999999999999999999999
Q ss_pred ceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhh
Q 008342 95 AVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIE 174 (569)
Q Consensus 95 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 174 (569)
+++++++++++.+++.+++++++++++|++.+....+.+...... .....++....... ...+...
T Consensus 87 ~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~--------~~~~~~~ 152 (517)
T PRK08008 87 AIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDA------TPLRHICLTRVALP--------ADDGVSS 152 (517)
T ss_pred eEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcc------ccCcEEEEecCCCc--------ccccccC
Confidence 999999999999999999999999999999887665555433221 02334444433211 1122344
Q ss_pred HHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHH
Q 008342 175 YEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYT 254 (569)
Q Consensus 175 ~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~ 254 (569)
+.++............+...+++++++|||||||.||+|.+||.++............+.+++++++.+|++|..+....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 232 (517)
T PRK08008 153 FTQLKAQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTA 232 (517)
T ss_pred HHHHhccCCccccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcCCCCCCeEEEecCcHHHHHHHHH
Confidence 55444333222222233456899999999999999999999999987655433334457889999999999998776544
Q ss_pred HH-HHHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhh-
Q 008342 255 WS-LAALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQ- 332 (569)
Q Consensus 255 ~~-~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~- 332 (569)
+. .+..|+++++...+++..+++.++++++|++.++|.+++.+.......... ..+++.+.++ ++++++...++.+
T Consensus 233 ~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~l~~~~~~-~~~~~~~~~~~~~~ 310 (517)
T PRK08008 233 AMAAFSAGATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDR-QHCLREVMFY-LNLSDQEKDAFEER 310 (517)
T ss_pred HHHHHhcCcEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccccc-cccceeeEEe-cCCCHHHHHHHHHH
Confidence 44 455677777777889999999999999999999999999988765443322 4667777665 4788888888774
Q ss_pred cCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEec---
Q 008342 333 KGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRG--- 409 (569)
Q Consensus 333 ~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~--- 409 (569)
+++++++.||+||+++.++...... ....+++|.|.+++ +++++|++ +++++.+ +.|||+++|
T Consensus 311 ~~~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~~G~~~~g~-~~~i~d~~-~~~~~~g--~~Gel~v~g~~~ 376 (517)
T PRK08008 311 FGVRLLTSYGMTETIVGIIGDRPGD----------KRRWPSIGRPGFCY-EAEIRDDH-NRPLPAG--EIGEICIKGVPG 376 (517)
T ss_pred hCCeEEeeccccccccccccCCccc----------cccCCccccCCCCc-EEEEECCC-CCCCCCC--CcceEEEeCCCC
Confidence 4999999999999986554432211 12236899999999 69999976 8888887 789999998
Q ss_pred CcccccccCCcchhhhhhc-CCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecC
Q 008342 410 SCVMKGYLKNPKANEEAFA-NGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPD 488 (569)
Q Consensus 410 ~~~~~gy~~~~~~~~~~~~-~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~ 488 (569)
++++.||+++++.+.+.|. +|||+|||+++++++|.++++||.+|+|+.+|++++|.+||.++.+++.|.+++|++.++
T Consensus 377 ~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~iE~~l~~~~~v~~~~v~g~~~ 456 (517)
T PRK08008 377 KTIFKEYYLDPKATAKVLEADGWLHTGDTGYVDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKD 456 (517)
T ss_pred cchhhhHhCChHHHhhcccCCCCeeccceEEECCCCcEEEeecccceEEeCCEEECHHHHHHHHHhCCceeeEEEEccCC
Confidence 5899999999999988884 799999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHH
Q 008342 489 ERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLR 553 (569)
Q Consensus 489 ~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~ 553 (569)
+..++.+.+++++..+... ..+++.++++++++.+++|..+.+++ ||+|++||++|+.|+
T Consensus 457 ~~~~~~~~~~v~~~~~~~~-----~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~gK~~r~~l~ 517 (517)
T PRK08008 457 SIRDEAIKAFVVLNEGETL-----SEEEFFAFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIKKNLK 517 (517)
T ss_pred CCCCceEEEEEEECCCCCC-----CHHHHHHHHHhhcccccCCcEEEEeccCCCCCccceehhhcC
Confidence 8888889999998876443 45789999999999999999998777 999999999999874
No 63
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=1.1e-65 Score=553.31 Aligned_cols=520 Identities=22% Similarity=0.267 Sum_probs=398.1
Q ss_pred ccCHHHHHHHhhhhCCCceeeeeC------------C-----------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEE
Q 008342 19 ALTPLWFINRAATLHPTRKSVVYG------------S-----------KHYTWHQTYRRCRRFASALSKLSIGLGTTVSV 75 (569)
Q Consensus 19 ~~~l~~~l~~~a~~~p~~~a~~~~------------~-----------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i 75 (569)
-.|+.++|+++++.+|+++|+.+. + ..+||+|+.++++++|++|.++|+++||+|+|
T Consensus 57 ~~t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai 136 (696)
T PLN02387 57 ATTLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVALGHNKEERVAI 136 (696)
T ss_pred CCCHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 368999999999999999999431 1 23899999999999999999999999999999
Q ss_pred EcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEec
Q 008342 76 IAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIG 155 (569)
Q Consensus 76 ~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 155 (569)
+++|+++|++++|||+++|++++|+++.++.+++.++|++++++++|++.+....+......++ ...+++.++
T Consensus 137 ~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~-------~l~~ii~~~ 209 (696)
T PLN02387 137 FADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQLE-------TVKRVIYMD 209 (696)
T ss_pred EcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhhccC-------CceEEEEEC
Confidence 9999999999999999999999999999999999999999999999999876665554443333 456777776
Q ss_pred CCCcchhhh-HHhhhcchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHh-CC
Q 008342 156 DESCDSKQL-EYALARGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIW-GM 233 (569)
Q Consensus 156 ~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~-~~ 233 (569)
+........ .........+|++++..............++++++|+|||||||.||||++||++++.........+ ++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~ 289 (696)
T PLN02387 210 DEGVDSDSSLSGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVVPKL 289 (696)
T ss_pred CCCchhhhhhhccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhcCCC
Confidence 532211100 0001112345666655433222222234678999999999999999999999999988877665543 57
Q ss_pred CCCcEEEEcCCccchhhHHHHHHHHHhcceEEEeccCC--------hHHHHHHHHhcCccEEeehHHHHHHHHccCCCC-
Q 008342 234 NEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICLRQVT--------AKAVYTAIATHGVTHFCAAPVVLNAIANASPED- 304 (569)
Q Consensus 234 ~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~- 304 (569)
.++|++++.+|++|.+++.....++..|+++.+..... +..++..+++++||++.++|.+++.+.+.....
T Consensus 290 ~~~d~~l~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~ 369 (696)
T PLN02387 290 GKNDVYLAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKV 369 (696)
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHHH
Confidence 89999999999999999887666666666554432211 234567899999999999999999887532100
Q ss_pred ------------------------------CC---------------CCcccceeeeecCCCCCHHHHHHhhh-cCCeEe
Q 008342 305 ------------------------------TI---------------LPLTNVVNVNTAGAPPPPSLLFAMSQ-KGFRIT 338 (569)
Q Consensus 305 ------------------------------~~---------------~~l~~l~~~~~~g~~l~~~~~~~~~~-~~~~i~ 338 (569)
.. ...+++|.+++||+++++++.+.++. +|++++
T Consensus 370 ~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~g~~v~ 449 (696)
T PLN02387 370 DAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICLGAPIG 449 (696)
T ss_pred hcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHcCCCee
Confidence 00 00158999999999999999888874 599999
Q ss_pred cccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeC-CCCcccCCCCCceEEEEEecCccccccc
Q 008342 339 HTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDA-RTNQPVPADGKTIGEIVMRGSCVMKGYL 417 (569)
Q Consensus 339 ~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~-~~~~~~~~~~~~~Gel~v~~~~~~~gy~ 417 (569)
+.||+||+++.++.+... ....+++|.|++++ +++|+|. +.+..+.......|||+++|++++.|||
T Consensus 450 ~~YG~TEt~~~~~~~~~~-----------~~~~gsvG~p~p~~-evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~GY~ 517 (696)
T PLN02387 450 QGYGLTETCAGATFSEWD-----------DTSVGRVGPPLPCC-YVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLGYF 517 (696)
T ss_pred EeechhhcccceeecCcc-----------cCCCCccCCCCCce-EEEEeeccccCcccCCCCCCCceEEeccCcccchhc
Confidence 999999998766554321 11247899999999 6999994 4333322111136999999999999999
Q ss_pred CCcchhhhhhc---CC--eeecCceeEEcCCCeEEEecccCceEEe-CceeechHHHHHHHhcCCCceeeEEEeecCCCC
Q 008342 418 KNPKANEEAFA---NG--WFHSGDLAVKHPDNYIEIKDRLKDVIIS-GGENISSVEVEKVLYLHPLVLEAAVVARPDERW 491 (569)
Q Consensus 418 ~~~~~~~~~~~---~g--~~~tGD~~~~~~~g~l~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~ 491 (569)
++++.+.+.|. +| ||+|||+|++|+||+++|.||.+|+||. +|++|+|.+||++|.+||.|.+++|++.+..
T Consensus 518 ~~pe~T~~~f~~d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~~~p~V~~~~V~g~~~~-- 595 (696)
T PLN02387 518 KNQEKTDEVYKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVSPYVDNIMVHADPFH-- 595 (696)
T ss_pred CCHHHHhhhhccccCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHhcCCCeeEEEEEecCCc--
Confidence 99999999983 34 9999999999999999999999999996 6999999999999999999999999987633
Q ss_pred CceeeEEEEecCCcch----------h------hhhhHHHHHHHHH-----HhcCCCCcCCceEEecc--CC-----CCC
Q 008342 492 GESPCAFVTLKPEADE----------L------DKGKLAEDVSKFC-----RAKMPSYWVPKSVVFAA--LP-----KSA 543 (569)
Q Consensus 492 g~~~~~~v~~~~~~~~----------~------~~~~~~~~l~~~~-----~~~l~~~~~p~~i~~~~--lP-----~t~ 543 (569)
..++++|++.+..-. . ......+.+.+.+ +.+|+.+.+|+.+.+.. +- +|+
T Consensus 596 -~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~~~~i~l~~~~~t~~~g~lT~ 674 (696)
T PLN02387 596 -SYCVALVVPSQQALEKWAKKAGIDYSNFAELCEKEEAVKEVQQSLSKAAKAARLEKFEIPAKIKLLPEPWTPESGLVTA 674 (696)
T ss_pred -ceEEEEEEeCHHHHHHHHHHcCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEECCCCCCCCCcCCh
Confidence 247788877653210 0 0011223333333 34699999999998765 22 689
Q ss_pred CCcccHHHHHHHHHhcC
Q 008342 544 TGKIQKHLLRAKAKEMG 560 (569)
Q Consensus 544 ~GKi~r~~l~~~~~~~~ 560 (569)
+.|+.|+.+++.|+++-
T Consensus 675 t~K~~R~~i~~~y~~~i 691 (696)
T PLN02387 675 ALKLKREQIRKKFKDDL 691 (696)
T ss_pred hhhhhhHHHHHHHHHHH
Confidence 99999999999998753
No 64
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=1.4e-64 Score=533.34 Aligned_cols=501 Identities=24% Similarity=0.364 Sum_probs=411.7
Q ss_pred cccccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCc
Q 008342 16 NYTALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGA 95 (569)
Q Consensus 16 ~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 95 (569)
.|.+.++.++|+++++ |+++|+++.++++||+||.+++.++|+.|.+.|+++|++|+++++|+++++++++||+++|+
T Consensus 21 ~~~~~~~~~~~~~~a~--p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~~G~ 98 (536)
T PRK10946 21 YWQDLPLTDILTRHAA--SDAIAVICGERQFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFALLKLGV 98 (536)
T ss_pred eecCccHHHHHHHhhC--CCCeEEEeCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHHHHHcCe
Confidence 3567899999999997 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeeccccCCHHHHHHHHhcCCceEEEEcccchH-----HHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhc
Q 008342 96 VLNSINIRLNATVVAFILSHASSAVVIVDQEFFS-----LAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALAR 170 (569)
Q Consensus 96 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 170 (569)
+++++.+.....++..+++.+++++++++.+... .........+ ....++..++.
T Consensus 99 v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~~~------------- 158 (536)
T PRK10946 99 APVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHS-------SLRVVLLLNDD------------- 158 (536)
T ss_pred EEecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCC-------CceEEEEecCC-------------
Confidence 8887777777888999999999999999865321 1111111111 12223322211
Q ss_pred chhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhh
Q 008342 171 GAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNG 250 (569)
Q Consensus 171 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g 250 (569)
+...+.+++........ ..+..++++++++|||||||.||+|.+||.++..........+++.++|++++.+|++|.++
T Consensus 159 ~~~~~~~~~~~~~~~~~-~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~ 237 (536)
T PRK10946 159 GEHSLDDAINHPAEDFT-ATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICGFTPQTRYLCALPAAHNYP 237 (536)
T ss_pred CCccHHHHhhCcccccc-cCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCceEEEecCcccccc
Confidence 11223333333222111 22346789999999999999999999999999999888888889999999999999999988
Q ss_pred HHH--HHHHHHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCC-CCCCCcccceeeeecCCCCCHHHH
Q 008342 251 WSY--TWSLAALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPE-DTILPLTNVVNVNTAGAPPPPSLL 327 (569)
Q Consensus 251 ~~~--~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~-~~~~~l~~l~~~~~~g~~l~~~~~ 327 (569)
+.. .+..+..|+++++...+++..+++.++++++|++.++|.++..++..... .....+++++.+++||+++++++.
T Consensus 238 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~ 317 (536)
T PRK10946 238 MSSPGALGVFLAGGTVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGARLSETLA 317 (536)
T ss_pred chhhhHHHHhhcCcEEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCCCCCHHHH
Confidence 753 55566778887777788999999999999999999999999999876311 111227889999999999999999
Q ss_pred HHhhh-cCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCcee-eccCCceeeeCCCCcccCCCCCceEEE
Q 008342 328 FAMSQ-KGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRT-ICLDGLDVIDARTNQPVPADGKTIGEI 405 (569)
Q Consensus 328 ~~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~~~i~d~~~~~~~~~~~~~~Gel 405 (569)
+++.+ +++++++.||+||++.....+ .. .......++|.|+ +++ .++++|++ +++++.| +.|||
T Consensus 318 ~~~~~~~g~~~~~~YG~tE~~~~~~~~-~~---------~~~~~~~~~G~p~~~~~-~v~i~d~~-~~~~~~g--~~Gel 383 (536)
T PRK10946 318 RRIPAELGCQLQQVFGMAEGLVNYTRL-DD---------SDERIFTTQGRPMSPDD-EVWVADAD-GNPLPQG--EVGRL 383 (536)
T ss_pred HHHHHhcCCeEEEeecccccceeeecC-CC---------ccccccccCCcccCCCc-eEEEECCC-CCCCCCC--CccEE
Confidence 99874 599999999999965332211 11 1112346889998 666 69999975 8888887 89999
Q ss_pred EEecCcccccccCCcchhhhhh-cCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEE
Q 008342 406 VMRGSCVMKGYLKNPKANEEAF-ANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVV 484 (569)
Q Consensus 406 ~v~~~~~~~gy~~~~~~~~~~~-~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~ 484 (569)
+++|+.++.||+++++.+...| .++||+|||+|+++++|.+++.||.+|+++++|.+++|.+||+.|.++|+|.+++|+
T Consensus 384 ~v~g~~~~~GY~~~~~~t~~~~~~d~~~~TGDl~~~d~~G~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~ 463 (536)
T PRK10946 384 MTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLVSIDPDGYITVVGREKDQINRGGEKIAAEEIENLLLRHPAVIHAALV 463 (536)
T ss_pred EEecCccchhhcCCcccchhhcccCCceecCceEEECCCCcEEEeccccceeecCCEEEcHHHHHHHHHhCCCcceEEEE
Confidence 9999999999999999998888 479999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhc-CCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHhcC
Q 008342 485 ARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAK-MPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKEMG 560 (569)
Q Consensus 485 ~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~-l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~ 560 (569)
+.+++..|+.+++++++.++. ...++.+++++. +++|++|..+.+.+ +|+|++||++|++|++++.+..
T Consensus 464 ~~~~~~~g~~~~a~vv~~~~~-------~~~~l~~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKv~r~~L~~~~~~~~ 534 (536)
T PRK10946 464 SMEDELMGEKSCAFLVVKEPL-------KAVQLRRFLREQGIAEFKLPDRVECVDSLPLTAVGKVDKKQLRQWLASRA 534 (536)
T ss_pred cCCCcccCceEEEEEEeCCCC-------CHHHHHHHHHhCCccccccCcEEEEeccCCCCCCCcccHHHHHHHHHhhc
Confidence 999988888899999877642 346889999876 99999999998776 9999999999999999987654
No 65
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-64 Score=533.75 Aligned_cols=488 Identities=24% Similarity=0.309 Sum_probs=393.7
Q ss_pred cCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCC-CCCCEEEEEcCCchhHHHHHHHhhhcCceEe
Q 008342 20 LTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSI-GLGTTVSVIAPNVPAMYEAQFGAPMAGAVLN 98 (569)
Q Consensus 20 ~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (569)
.|+.++|.+++ +|+++|+++.+..+||.||.++++++|..|.+.|+ ++||+|+++++|+++++++++||+++|++++
T Consensus 3 ~~~~~~l~~~~--~p~~~Al~~~~~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~Ga~~v 80 (540)
T PRK13388 3 DTIAQLLRDRA--GDDTIAVRYGDRTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAALGGYVLV 80 (540)
T ss_pred hhHHHHHHhhc--cCCceEEEECCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHhCCCEEE
Confidence 57888898876 79999999999999999999999999999999999 7999999999999999999999999999999
Q ss_pred eccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHhh
Q 008342 99 SINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEKF 178 (569)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (569)
|++|.++.+++.++++.++++++|++++....+.... . ....++.+++ ..+.++
T Consensus 81 ~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~--~--------~~~~~i~~~~----------------~~~~~~ 134 (540)
T PRK13388 81 GLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLD--L--------PGVRVLDVDT----------------PAYAEL 134 (540)
T ss_pred EecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhc--c--------cCceEEEccc----------------hhhhhh
Confidence 9999999999999999999999999877654433210 1 1123333322 123333
Q ss_pred hhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHHHHH-
Q 008342 179 LETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTWSL- 257 (569)
Q Consensus 179 l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~- 257 (569)
+.......+ .....++++++++|||||||.||+|.++|.++..........+++.++|+++..+|++|.+++...+..
T Consensus 135 ~~~~~~~~~-~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~ 213 (540)
T PRK13388 135 VAAAGALTP-HREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFGLTRDDVCYVSMPLFHSNAVMAGWAPA 213 (540)
T ss_pred hccccCcCC-CCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhCCCCCCEEEEeeCchhhcchHHHHHHH
Confidence 322111111 122467899999999999999999999999998888877888899999999999999999988766654
Q ss_pred HHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhh-hcCCe
Q 008342 258 AALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMS-QKGFR 336 (569)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~~~ 336 (569)
+..|+++++.+.+++..+++.++++++|++..+|..+..++......... ..+++. ++ |+++++....++. .++++
T Consensus 214 l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~-~~~l~~-~~-G~~~~~~~~~~~~~~~~~~ 290 (540)
T PRK13388 214 VASGAAVALPAKFSASGFLDDVRRYGATYFNYVGKPLAYILATPERPDDA-DNPLRV-AF-GNEASPRDIAEFSRRFGCQ 290 (540)
T ss_pred HHcCcEEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCCcccc-ccceEE-EE-CCCCCHHHHHHHHHHhCCc
Confidence 44566665566788999999999999999999999999988765432222 345553 33 6667777777776 45999
Q ss_pred EecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCC------------CcccCCCCCceEE
Q 008342 337 ITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDART------------NQPVPADGKTIGE 404 (569)
Q Consensus 337 i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~------------~~~~~~~~~~~Ge 404 (569)
+++.||+||++.++.... . ...+++|.|.+++ +++++++ |+.+..+ +..||
T Consensus 291 l~~~YG~tE~~~~~~~~~---~----------~~~~~vG~p~~g~---~i~~~~~~~~~~~~~~d~~g~~~~~~-~~~GE 353 (540)
T PRK13388 291 VEDGYGSSEGAVIVVREP---G----------TPPGSIGRGAPGV---AIYNPETLTECAVARFDAHGALLNAD-EAIGE 353 (540)
T ss_pred eecccccccccceeecCC---C----------CCCCCCCCCCCCc---EEEcCCCCccccceeccCccccccCC-CcceE
Confidence 999999999986554321 0 1126788888764 3333332 4443222 26899
Q ss_pred EEEe-cCcccccccCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEE
Q 008342 405 IVMR-GSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAV 483 (569)
Q Consensus 405 l~v~-~~~~~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v 483 (569)
|+++ |+.++.||++++..+.+.|.+|||+|||+|+++++|.+++.||.+|+|+++|.+|+|.+||.+|.++|.|.+|+|
T Consensus 354 l~v~~g~~~~~gY~~~~~~t~~~~~~g~~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v 433 (540)
T PRK13388 354 LVNTAGAGFFEGYYNNPEATAERMRHGMYWSGDLAYRDADGWIYFAGRTADWMRVDGENLSAAPIERILLRHPAINRVAV 433 (540)
T ss_pred EEEecCCcccccccCChHHHHHHhhcCceeccceEEEcCCCcEEEeccCCceEEECCEEeCHHHHHHHHHhCCCceEEEE
Confidence 9998 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHh--cCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHhcC
Q 008342 484 VARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRA--KMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKEMG 560 (569)
Q Consensus 484 ~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~--~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~ 560 (569)
++.+++..|+.+++++++.++... ..+++.++++. .|+.+++|..+++++ ||+|++||++|++|++...+..
T Consensus 434 ~g~~~~~~g~~~~~~v~~~~~~~~-----~~~~l~~~l~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~R~~L~~~~~~~~ 508 (540)
T PRK13388 434 YAVPDERVGDQVMAALVLRDGATF-----DPDAFAAFLAAQPDLGTKAWPRYVRIAADLPSTATNKVLKRELIAQGWATG 508 (540)
T ss_pred EEccCCCCCceeEEEEEECCCCcC-----CHHHHHHHHHhhccCCcccCCcEEEEeccCCCCCcceeeHHhHHHhccCCC
Confidence 999998888888888888766443 34678888875 499999999998776 9999999999999999876553
Q ss_pred C
Q 008342 561 P 561 (569)
Q Consensus 561 ~ 561 (569)
.
T Consensus 509 ~ 509 (540)
T PRK13388 509 D 509 (540)
T ss_pred C
Confidence 3
No 66
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.1e-64 Score=537.38 Aligned_cols=508 Identities=25% Similarity=0.335 Sum_probs=407.1
Q ss_pred ccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhc-CCCCCCEEEEEcCCchhHHHHHHHhhhcCceE
Q 008342 19 ALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKL-SIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVL 97 (569)
Q Consensus 19 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~-g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 97 (569)
++++.++|++++..+|+++|+.+.++++||.||.++++++|++|.+. |+++||+|+++++|++++++++|||+++|+++
T Consensus 23 ~~~~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~~G~v~ 102 (562)
T PRK12492 23 YKSVVEVFERSCKKFADRPAFSNLGVTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALRAGLIV 102 (562)
T ss_pred cCcHHHHHHHHHHhCCCCeeEecCCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEE
Confidence 46899999999999999999999899999999999999999999984 99999999999999999999999999999999
Q ss_pred eeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCC-cch--------------h
Q 008342 98 NSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDES-CDS--------------K 162 (569)
Q Consensus 98 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~--------------~ 162 (569)
+++++.++.+++.+++++++++++++++...+......... ....++...... ... .
T Consensus 103 v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (562)
T PRK12492 103 VNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDT--------GIEYLIEAKMGDLLPAAKGWLVNTVVDKVKK 174 (562)
T ss_pred eccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhcc--------CceEEEeechhhccccccchhcccccccccc
Confidence 99999999999999999999999999876544443322110 011111110000 000 0
Q ss_pred hhHHhhhcchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhC---------C
Q 008342 163 QLEYALARGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWG---------M 233 (569)
Q Consensus 163 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~---------~ 233 (569)
..+.........|++++...............+++++|+|||||||.||+|.++|+++..........+. +
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~ 254 (562)
T PRK12492 175 MVPAYHLPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLM 254 (562)
T ss_pred cccccCCcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccccc
Confidence 0000001122345555433322211122345678999999999999999999999998777665544432 2
Q ss_pred CC-CcEEEEcCCccchhhHHHHHHHHH-hcceEEEe-ccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcc
Q 008342 234 NE-GAVFLWTLPMFHGNGWSYTWSLAA-LCGTSICL-RQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLT 310 (569)
Q Consensus 234 ~~-~d~~~~~~p~~~~~g~~~~~~~~~-~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~ 310 (569)
.. +++++..+|++|.+++...+...+ .|+..++. ..+++..+++.++++++|++.++|+++..+.......... ++
T Consensus 255 ~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~-~~ 333 (562)
T PRK12492 255 KEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLD-FS 333 (562)
T ss_pred cCCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCccccc-cc
Confidence 23 357788999999999865555444 45545544 3468899999999999999999999999998876544444 78
Q ss_pred cceeeeecCCCCCHHHHHHhhh-cCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeC
Q 008342 311 NVVNVNTAGAPPPPSLLFAMSQ-KGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDA 389 (569)
Q Consensus 311 ~l~~~~~~g~~l~~~~~~~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~ 389 (569)
++|.+++||+++++.+.+++.+ .++++++.||+||++++++.+.... ....+++|.|++++ .++|+|+
T Consensus 334 ~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~~G~p~~~~-~v~ivd~ 402 (562)
T PRK12492 334 ALKLTNSGGTALVKATAERWEQLTGCTIVEGYGLTETSPVASTNPYGE----------LARLGTVGIPVPGT-ALKVIDD 402 (562)
T ss_pred ceeEEEeccccCCHHHHHHHHHHhCCceeeccCccccCceeeecCCcc----------cccCCccceecCCC-EEEEECC
Confidence 9999999999999999999885 4999999999999987665443211 11236789999999 6999998
Q ss_pred CCCcccCCCCCceEEEEEecCcccccccCCcchhhhhh-cCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHH
Q 008342 390 RTNQPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAF-ANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEV 468 (569)
Q Consensus 390 ~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~i 468 (569)
+ +++++.| +.|||+++|+.++.||+++++.+...| .+|||+|||+|+++++|.+++.||.||+|+++|.+++|.+|
T Consensus 403 ~-~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i~~~eI 479 (562)
T PRK12492 403 D-GNELPLG--ERGELCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEI 479 (562)
T ss_pred C-CCCCCCC--CceEEEEeCCccccccccCchhhhhcccCCCceecCcEEEECCCCeEEEecccCCeEEECCEEECHHHH
Confidence 5 8888877 789999999999999999999998888 47999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcc
Q 008342 469 EKVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKI 547 (569)
Q Consensus 469 E~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi 547 (569)
|..|.++|.|.+++|++.++...++.+.++++...... ..+++.++++++++.|++|..+.+++ ||+|++||+
T Consensus 480 E~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~------~~~~i~~~~~~~l~~~~~P~~i~~~~~~P~t~~GK~ 553 (562)
T PRK12492 480 EDVVMAHPKVANCAAIGVPDERSGEAVKLFVVARDPGL------SVEELKAYCKENFTGYKVPKHIVLRDSLPMTPVGKI 553 (562)
T ss_pred HHHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCCCCC------CHHHHHHHHHHhcccccCCcEEEEeccCCCCCCCce
Confidence 99999999999999999998888888988887654321 35789999999999999999999777 999999999
Q ss_pred cHHHHHHH
Q 008342 548 QKHLLRAK 555 (569)
Q Consensus 548 ~r~~l~~~ 555 (569)
+|++|+++
T Consensus 554 ~r~~L~~~ 561 (562)
T PRK12492 554 LRRELRDI 561 (562)
T ss_pred eHHHHHhh
Confidence 99999865
No 67
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-64 Score=534.87 Aligned_cols=521 Identities=23% Similarity=0.255 Sum_probs=415.5
Q ss_pred cccccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCc
Q 008342 16 NYTALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGA 95 (569)
Q Consensus 16 ~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 95 (569)
....+++.++|++++..+|+++|++..++++||+||.+++.++|+.|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 6 ~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la~~~~G~ 85 (540)
T PRK06164 6 APRADTLASLLDAHARARPDAVALIDEDRPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLACARLGA 85 (540)
T ss_pred ccCCCCHHHHHHHHHHhCCCCeEEecCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHHHHHhCc
Confidence 44566999999999999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred eEeeccccCCHHHHHHHHhcCCceEEEEcccchH-HHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhh
Q 008342 96 VLNSINIRLNATVVAFILSHASSAVVIVDQEFFS-LAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIE 174 (569)
Q Consensus 96 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 174 (569)
+++|+++..+.+++.++++.++++++|++++... .+......... ........++.+++...... ......
T Consensus 86 ~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~------~~~~~~ 157 (540)
T PRK06164 86 TVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPP--DALPPLRAIAVVDDAADATP------APAPGA 157 (540)
T ss_pred EEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccc--cccCCcceEEEeccCcccCC------CCCccc
Confidence 9999999999999999999999999999876421 11111111100 00012334444442110000 000001
Q ss_pred HHhhhhcCCCCCC---CCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhH
Q 008342 175 YEKFLETGDPEFA---WKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGW 251 (569)
Q Consensus 175 ~~~~l~~~~~~~~---~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~ 251 (569)
+.++......... .......+++++++|||||||.||+|.++|.++..........+++..++++++.+|++|.+|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~ 237 (540)
T PRK06164 158 RVQLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYGYDPGAVLLAALPFCGVFGF 237 (540)
T ss_pred ccccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEcCCchhHHHH
Confidence 1111111111000 0112346789999999999999999999999999988888888899999999999999999999
Q ss_pred HHHHHHHHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecC-CCCCHHHHHHh
Q 008342 252 SYTWSLAALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAG-APPPPSLLFAM 330 (569)
Q Consensus 252 ~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g-~~l~~~~~~~~ 330 (569)
...+.++..|+++++.+.+++..+++.|+++++|++.++|+++..+.+... .... +++++.+..+| .+...++.+++
T Consensus 238 ~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~~-~~~~-~~~l~~~~~~~~~~~~~~~~~~~ 315 (540)
T PRK06164 238 STLLGALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDTAG-ERAD-FPSARLFGFASFAPALGELAALA 315 (540)
T ss_pred HHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhhc-ccCC-CcceeeeeeccCCcchHHHHHHH
Confidence 877777777878777788899999999999999999999999999988722 2223 78888876665 55566677777
Q ss_pred hhcCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCcee-eccCCceeeeCCCCcccCCCCCceEEEEEec
Q 008342 331 SQKGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRT-ICLDGLDVIDARTNQPVPADGKTIGEIVMRG 409 (569)
Q Consensus 331 ~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~ 409 (569)
...++++++.||+||++++++.+..... ......+.|.+. +++ .++|+|++++++++.| +.|||+++|
T Consensus 316 ~~~~~~~~~~YG~tE~~~~~~~~~~~~~--------~~~~~~~~g~~~~~~~-~~~i~d~~~~~~~~~g--~~Gel~v~g 384 (540)
T PRK06164 316 RARGVPLTGLYGSSEVQALVALQPATDP--------VSVRIEGGGRPASPEA-RVRARDPQDGALLPDG--ESGEIEIRA 384 (540)
T ss_pred hhcCCceecceeeccccceeeccCCCCC--------CcceeccCccccCCCe-EEEEecCCCCcCCCCC--CeeEEEEec
Confidence 6669999999999999876554432111 111124557765 677 5999998889999887 799999999
Q ss_pred CcccccccCCcchhhhhhc-CCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecC
Q 008342 410 SCVMKGYLKNPKANEEAFA-NGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPD 488 (569)
Q Consensus 410 ~~~~~gy~~~~~~~~~~~~-~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~ 488 (569)
++++.||+++++.+...|. +|||+|||+|+++++|.+++.||.+|+|+++|.+++|.+||+.|.+++.|.+++|++.+.
T Consensus 385 ~~~~~gY~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~~~~v~~~~v~~~~~ 464 (540)
T PRK06164 385 PSLMRGYLDNPDATARALTDDGYFRTGDLGYTRGDGQFVYQTRMGDSLRLGGFLVNPAEIEHALEALPGVAAAQVVGATR 464 (540)
T ss_pred ccccccccCCchhhhhcccCCCceecCCeEEEcCCceEEEEeecCCeEEECCEEcCHHHHHHHHHhCCCceeEEEEecCC
Confidence 9999999999999988884 789999999999999999999999999999999999999999999999999999999874
Q ss_pred CCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCC---cccHHHHHHHHHhcCCcc
Q 008342 489 ERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATG---KIQKHLLRAKAKEMGPVK 563 (569)
Q Consensus 489 ~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~G---Ki~r~~l~~~~~~~~~~~ 563 (569)
..++.++++++..++... ..+++.++|+++++.+++|..+.+.+ +|+|++| |++|+.|++++++..-.+
T Consensus 465 -~~~~~~~~~vv~~~~~~~-----~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~g~~~Ki~r~~L~~~~~~~~~~~ 537 (540)
T PRK06164 465 -DGKTVPVAFVIPTDGASP-----DEAGLMAACREALAGFKVPARVQVVEAFPVTESANGAKIQKHRLREMAQARLAAE 537 (540)
T ss_pred -CCceeEEEEEEeCCCCCC-----CHHHHHHHHHhhcccCcCCcEEEEecCCCCCCCCccccccHHHHHHHHHHhhhhh
Confidence 345678888887765433 56789999999999999999998777 9999999 999999999988765444
No 68
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=3e-65 Score=545.91 Aligned_cols=504 Identities=22% Similarity=0.274 Sum_probs=395.4
Q ss_pred cccCHHHHHHHhhhhCCCceeeeeCC---------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHH
Q 008342 18 TALTPLWFINRAATLHPTRKSVVYGS---------KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQF 88 (569)
Q Consensus 18 ~~~~l~~~l~~~a~~~p~~~a~~~~~---------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~l 88 (569)
..+|+.++++++++++|+++|+++.+ +.+||+||.++++++|++|.+. +++||+|+++++|++++++++|
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~~~l 110 (612)
T PRK12476 32 PGTTLISLIERNIANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVAGFF 110 (612)
T ss_pred ccCcHHHHHHHHHHhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHHHHH
Confidence 35799999999999999999998732 4899999999999999999986 9999999999999999999999
Q ss_pred HhhhcCceEeec-cccCC--HHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhH
Q 008342 89 GAPMAGAVLNSI-NIRLN--ATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLE 165 (569)
Q Consensus 89 A~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 165 (569)
||+++|++++|+ ++.++ .+++.+++++++++++|++++....+......+.. .....++.+++...
T Consensus 111 A~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~~~~~------ 179 (612)
T PRK12476 111 AAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPR-----LRRPRVIAIDAIPD------ 179 (612)
T ss_pred HHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhccc-----ccCceEEEeccccc------
Confidence 999999999999 57766 78999999999999999988766554433222210 01233444432110
Q ss_pred HhhhcchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhC-CCCCcEEEEcCC
Q 008342 166 YALARGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWG-MNEGAVFLWTLP 244 (569)
Q Consensus 166 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~-~~~~d~~~~~~p 244 (569)
...... ......++++++|+|||||||.||+|.++|+++..........++ +.+++++++.+|
T Consensus 180 ---------------~~~~~~-~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~P 243 (612)
T PRK12476 180 ---------------SAGESF-VPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDRNTHGVSWLP 243 (612)
T ss_pred ---------------cccccc-cCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhccCCCCceEEEeCC
Confidence 000000 011235689999999999999999999999999877776666677 788999999999
Q ss_pred ccchhhHHHHHHHHHhcceEEEecc--C--ChHHHHHHHH--hcCccEEeehHHHHHHHHccCC----CCCCCCccccee
Q 008342 245 MFHGNGWSYTWSLAALCGTSICLRQ--V--TAKAVYTAIA--THGVTHFCAAPVVLNAIANASP----EDTILPLTNVVN 314 (569)
Q Consensus 245 ~~~~~g~~~~~~~~~~g~~~~~~~~--~--~~~~~~~~i~--~~~~t~l~~~P~~~~~l~~~~~----~~~~~~l~~l~~ 314 (569)
++|.+|+...+..++.||+++++.+ + ++..+++.++ +++++++.++|.++..+..... ..... ++++|
T Consensus 244 l~h~~g~~~~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~-l~~lr- 321 (612)
T PRK12476 244 LYHDMGLSMIGFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDID-LSNVV- 321 (612)
T ss_pred cccccchHHHHHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcc-hhHhe-
Confidence 9999999887777788888887743 3 7899999995 5899999999998887776421 11223 78899
Q ss_pred eeecCCCCCHHHHHHhhhc----CC---eEecccccccCCCCccccccCCCCC----------------CCCchhhhhcc
Q 008342 315 VNTAGAPPPPSLLFAMSQK----GF---RITHTYGLTELTGPASVCAWKPEWD----------------SLPFETQARLN 371 (569)
Q Consensus 315 ~~~~g~~l~~~~~~~~~~~----~~---~i~~~YG~tE~~~~~~~~~~~~~~~----------------~~~~~~~~~~~ 371 (569)
+++||+++++++.+++.+. |+ ++++.||+||+++.++......... ..+........
T Consensus 322 ~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 401 (612)
T PRK12476 322 LIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAH 401 (612)
T ss_pred EEecccCCCHHHHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCccee
Confidence 9999999999999888753 43 4999999999876543322110000 00000011123
Q ss_pred ccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccccccCCcchhhhhhc-------------------CCee
Q 008342 372 ARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAFA-------------------NGWF 432 (569)
Q Consensus 372 ~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-------------------~g~~ 432 (569)
.++|.|++++ ++.|+|++++++++.| +.|||+++|++++.|||++++.+.+.|. ++||
T Consensus 402 ~~~G~~~~g~-~v~ivd~~~g~~~~~g--~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~ 478 (612)
T PRK12476 402 VSCGQVARSQ-WAVIVDPDTGAELPDG--EVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWL 478 (612)
T ss_pred EeCCCcCCCC-EEEEEeCCCCcCCCCC--CEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCee
Confidence 5789999999 6999998879999988 8999999999999999999999988884 2599
Q ss_pred ecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhc-CCCcee--eEEEeecCCCCCceeeEEEEecCCcchhh
Q 008342 433 HSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYL-HPLVLE--AAVVARPDERWGESPCAFVTLKPEADELD 509 (569)
Q Consensus 433 ~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~-~~~v~~--~~v~~~~~~~~g~~~~~~v~~~~~~~~~~ 509 (569)
+|||+|+++ ||+++|+||.||+|+++|++|+|.+||++|.+ ||.|.+ ++|++.+++. ++.+++++++.++....
T Consensus 479 ~TGDlg~~~-dG~l~i~GR~~d~I~~~G~~I~p~eIE~~l~~~~p~V~~~~v~v~~~~~~~-~~~~~~~v~~~~~~~~~- 555 (612)
T PRK12476 479 RTGDLGVYL-DGELYITGRIADLIVIDGRNHYPQDIEATVAEASPMVRRGYVTAFTVPAED-NERLVIVAERAAGTSRA- 555 (612)
T ss_pred eccccceeE-CCEEEEEeccCcEEEECCcccCHHHHHHHHHHhcccccCCcEEEEEecCCC-cceEEEEEEecCCcccc-
Confidence 999999985 99999999999999999999999999999985 799999 6777887776 78899998887653321
Q ss_pred hhhHHHHHHHHHHhcCC-CCcC-CceEEecc---CCCCCCCcccHHHHHHHHHhcC
Q 008342 510 KGKLAEDVSKFCRAKMP-SYWV-PKSVVFAA---LPKSATGKIQKHLLRAKAKEMG 560 (569)
Q Consensus 510 ~~~~~~~l~~~~~~~l~-~~~~-p~~i~~~~---lP~t~~GKi~r~~l~~~~~~~~ 560 (569)
..++|.+++++.+. .+++ |..+.|++ ||+|++||++|++|++++.+..
T Consensus 556 ---~~~~l~~~~~~~l~~~~~~~p~~v~~v~~~~lP~t~~GKi~r~~L~~~~~~~~ 608 (612)
T PRK12476 556 ---DPAPAIDAIRAAVSRRHGLAVADVRLVPAGAIPRTTSGKLARRACRAQYLDGR 608 (612)
T ss_pred ---cHHHHHHHHHHHHHHhhCCcceEEEEECCCCcCcCCchHHHHHHHHHHHHcCC
Confidence 33556667777665 3666 56676653 9999999999999999987654
No 69
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.7e-65 Score=530.00 Aligned_cols=477 Identities=26% Similarity=0.393 Sum_probs=396.9
Q ss_pred HHhhhhCCCceeeee--CCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccC
Q 008342 27 NRAATLHPTRKSVVY--GSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRL 104 (569)
Q Consensus 27 ~~~a~~~p~~~a~~~--~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~ 104 (569)
+.++..+|+++|+.+ .++.+||.||.+.+.++|.+|.+.|+++||+|+++++|++++++++|||+++|++++|+++.+
T Consensus 2 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~ 81 (488)
T PRK09088 2 AFHARLQPQRLAAVDLALGRRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVPLNWRL 81 (488)
T ss_pred chhhhhCCCceEEEecCCCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeCccC
Confidence 457788999999987 578999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHhhhhcCCC
Q 008342 105 NATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEKFLETGDP 184 (569)
Q Consensus 105 ~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 184 (569)
+.+++.+++++++++++|+++...... ... ..++++......
T Consensus 82 ~~~~~~~~~~~~~~~~ii~~~~~~~~~-----------------~~~---------------------~~~~~~~~~~~~ 123 (488)
T PRK09088 82 SASELDALLQDAEPRLLLGDDAVAAGR-----------------TDV---------------------EDLAAFIASADA 123 (488)
T ss_pred CHHHHHHHHHhCCCCEEEEcchhhccc-----------------ccc---------------------cchhhhhhhccc
Confidence 999999999999999999986532100 000 011111111000
Q ss_pred -CCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHHHHHHHh-cc
Q 008342 185 -EFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTWSLAAL-CG 262 (569)
Q Consensus 185 -~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~-g~ 262 (569)
..........+++++++|||||||.||+|.++|++++..+........+..+|++++.+|++|.+|+...+...+. |+
T Consensus 124 ~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~ 203 (488)
T PRK09088 124 LEPADTPSIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGG 203 (488)
T ss_pred cccccCCCCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEecchHHHHHHHHHHHHHHhcCC
Confidence 0011122356789999999999999999999999998877777767778899999999999999998776666555 55
Q ss_pred eEEEeccCChHHHHHHHH--hcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhhcCCeEecc
Q 008342 263 TSICLRQVTAKAVYTAIA--THGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQKGFRITHT 340 (569)
Q Consensus 263 ~~~~~~~~~~~~~~~~i~--~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~~~~i~~~ 340 (569)
++++...+.+..++..+. ++++|++.++|.+++.+.+........ +++++.+++||++++.+..+.+.+.++++++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~l~~~~~gG~~~~~~~~~~~~~~g~~v~~~ 282 (488)
T PRK09088 204 SILVSNGFEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPGFDAAA-LRHLTALFTGGAPHAAEDILGWLDDGIPMVDG 282 (488)
T ss_pred EEEEcCCCCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcCcCccc-cccceEEEecCCCCCHHHHHHHHHhCCceeee
Confidence 555556788888888886 489999999999999998765433333 78999999999999999888887779999999
Q ss_pred cccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccccccCCc
Q 008342 341 YGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGYLKNP 420 (569)
Q Consensus 341 YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~ 420 (569)
||+||++++....... .......+++|.|.+++ +++|+|++ +++++.+ +.|||+++|++++.||++++
T Consensus 283 YG~TE~~~~~~~~~~~--------~~~~~~~~~vG~~~~~~-~~~i~d~~-~~~~~~g--~~Gel~v~~~~~~~gY~~~~ 350 (488)
T PRK09088 283 FGMSEAGTVFGMSVDC--------DVIRAKAGAAGIPTPTV-QTRVVDDQ-GNDCPAG--VPGELLLRGPNLSPGYWRRP 350 (488)
T ss_pred ecccccccccccCCCc--------ccccccCCccccCCCCc-EEEEECCC-CCCCcCC--CceEEEEECCccchhhcCCh
Confidence 9999998654321110 01112336899999999 69999865 8888877 78999999999999999999
Q ss_pred chhhhhhc-CCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCCCCceeeEEE
Q 008342 421 KANEEAFA-NGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGESPCAFV 499 (569)
Q Consensus 421 ~~~~~~~~-~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v 499 (569)
+.+...|. +|||+|||+|+++++|.+++.||.+|+|+.+|.+++|.+||++|.++|.|.+++|++.+++..|+..++++
T Consensus 351 ~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v 430 (488)
T PRK09088 351 QATARAFTGDGWFRTGDIARRDADGFFWVVDRKKDMFISGGENVYPAEIEAVLADHPGIRECAVVGMADAQWGEVGYLAI 430 (488)
T ss_pred hhhhhhhcCCCCeeecceEEEcCCCcEEEeccccceEEeCCEEECHHHHHHHHHhCCCcceEEEEeCCCccCCceeEEEE
Confidence 88887774 89999999999999999999999999999999999999999999999999999999999887788888888
Q ss_pred EecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHhc
Q 008342 500 TLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKEM 559 (569)
Q Consensus 500 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~ 559 (569)
++.++... ..+++.++++++++.|++|..+.+++ ||+|++||++|++|++++.+.
T Consensus 431 ~~~~~~~~-----~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~~l~~~~~~~ 486 (488)
T PRK09088 431 VPADGAPL-----DLERIRSHLSTRLAKYKVPKHLRLVDALPRTASGKLQKARLRDALAAG 486 (488)
T ss_pred EECCCCCC-----CHHHHHHHHHhhCcCCCCCCEEEEcccCCCCCCCceeHHHHHHHHHhc
Confidence 87765432 45789999999999999999998777 999999999999999988764
No 70
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=4.1e-65 Score=545.55 Aligned_cols=518 Identities=21% Similarity=0.275 Sum_probs=394.7
Q ss_pred cccCHHHHHHHhhhhCCCceeeeeC----C-----eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHH
Q 008342 18 TALTPLWFINRAATLHPTRKSVVYG----S-----KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQF 88 (569)
Q Consensus 18 ~~~~l~~~l~~~a~~~p~~~a~~~~----~-----~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~l 88 (569)
...|++++|++.++++|+++|+.+. + ..+||+|+.++++++|.+|.+.|+++||+|+|+++|+++|++++|
T Consensus 40 ~~~t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~l 119 (660)
T PLN02430 40 DITTAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAME 119 (660)
T ss_pred CCCCHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 4568999999999999999998642 1 247999999999999999999999999999999999999999999
Q ss_pred HhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccchH-HHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHh
Q 008342 89 GAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFS-LAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYA 167 (569)
Q Consensus 89 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 167 (569)
||+++|++++|+++.++.+++.+++++++++++|+++.... .+.......+ ....++.+++...........
T Consensus 120 A~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~-------~l~~ii~~~~~~~~~~~~~~~ 192 (660)
T PLN02430 120 ACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAK-------RLKAIVSFTSVTEEESDKASQ 192 (660)
T ss_pred HHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCC-------CceEEEEECCCChHHhhhhhc
Confidence 99999999999999999999999999999999999875322 1111111111 345566665422111000000
Q ss_pred hhcchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhH---h--CCCCCcEEEEc
Q 008342 168 LARGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALI---W--GMNEGAVFLWT 242 (569)
Q Consensus 168 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~---~--~~~~~d~~~~~ 242 (569)
......+|++++...........+..++++++|+|||||||.||||++||+++.......... + +++++|++++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~ 272 (660)
T PLN02430 193 IGVKTYSWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYLSF 272 (660)
T ss_pred CCcEEEEHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEEEe
Confidence 111235677776544322222223467899999999999999999999999998876654322 1 46789999999
Q ss_pred CCccchhhHHHHHHHHHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCC-------------------
Q 008342 243 LPMFHGNGWSYTWSLAALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPE------------------- 303 (569)
Q Consensus 243 ~p~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~------------------- 303 (569)
+|++|.++.......+..|+++++.. .++..+++.+++++||++.++|.+++.+.+....
T Consensus 273 lPl~H~~~~~~~~~~l~~G~~i~~~~-~~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~ 351 (660)
T PLN02430 273 LPLAHILDRMIEEYFFRKGASVGYYH-GDLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYKY 351 (660)
T ss_pred CcHHHHHHHHHHHHHHHcCCEEEEeC-CChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 99999999877666666676666554 3778899999999999999999999887652100
Q ss_pred --------------CCC-----------CCcccceeeeecCCCCCHHHHHHhhhcC-CeEecccccccCCCCccccccCC
Q 008342 304 --------------DTI-----------LPLTNVVNVNTAGAPPPPSLLFAMSQKG-FRITHTYGLTELTGPASVCAWKP 357 (569)
Q Consensus 304 --------------~~~-----------~~l~~l~~~~~~g~~l~~~~~~~~~~~~-~~i~~~YG~tE~~~~~~~~~~~~ 357 (569)
... ...+++|.+++||+++++++.+.++..+ +.+++.||+||+++.++.....
T Consensus 352 ~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~- 430 (660)
T PLN02430 352 KLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLRVTSCAFVVQGYGLTETLGPTTLGFPD- 430 (660)
T ss_pred HHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHHHhcCCCeeeecchhhhhhceEeeccc-
Confidence 000 0015799999999999999977776664 6899999999998766543211
Q ss_pred CCCCCCchhhhhccccCCceeeccCCceeeeCC-CC-cccCCCCCceEEEEEecCcccccccCCcchhhhhhcCCeeecC
Q 008342 358 EWDSLPFETQARLNARQGVRTICLDGLDVIDAR-TN-QPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAFANGWFHSG 435 (569)
Q Consensus 358 ~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~-~~-~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~tG 435 (569)
.....+++|.|.+++ ++++.|.+ .+ .+.+.+ ..|||+++|++++.|||++++.+.+.|.+|||+||
T Consensus 431 ---------~~~~~gsvG~p~~~~-evki~d~~~~g~~~~~~~--~~GEi~vrg~~v~~GY~~~~e~t~~~~~dGw~~TG 498 (660)
T PLN02430 431 ---------EMCMLGTVGAPAVYN-ELRLEEVPEMGYDPLGEP--PRGEICVRGKCLFSGYYKNPELTEEVMKDGWFHTG 498 (660)
T ss_pred ---------cCCCCCCccCCCCce-EEEEEEcCCcCcccCCCC--CcceEEecCCCccccccCChHHhhhhhhccceecc
Confidence 112247899999999 69998732 22 333333 57999999999999999999999999999999999
Q ss_pred ceeEEcCCCeEEEecccCceEE-eCceeechHHHHHHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcch-------
Q 008342 436 DLAVKHPDNYIEIKDRLKDVII-SGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADE------- 507 (569)
Q Consensus 436 D~~~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~------- 507 (569)
|+|++++||++++.||.+|+|+ .+|++|+|.+||.+|.+||.|.+++|++.. .++.++|+|++.++.-.
T Consensus 499 Dig~~d~dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l~~~p~V~~~~V~G~~---~~~~~~A~vv~~~~~~~~~~~~~~ 575 (660)
T PLN02430 499 DIGEILPNGVLKIIDRKKNLIKLSQGEYVALEYLENVYGQNPIVEDIWVYGDS---FKSMLVAVVVPNEENTNKWAKDNG 575 (660)
T ss_pred ceEEECCCCcEEEEEcccccEEcCCCcEEchHHHHHHHhcCCCeeEEEEEecC---CcceEEEEEEcCHHHHHHHHHhCC
Confidence 9999999999999999999999 579999999999999999999999999843 24568888887653210
Q ss_pred --------hhhhhHHHHHHHHH-----HhcCCCCcCCceEEecc--C-----CCCCCCcccHHHHHHHHHhc
Q 008342 508 --------LDKGKLAEDVSKFC-----RAKMPSYWVPKSVVFAA--L-----PKSATGKIQKHLLRAKAKEM 559 (569)
Q Consensus 508 --------~~~~~~~~~l~~~~-----~~~l~~~~~p~~i~~~~--l-----P~t~~GKi~r~~l~~~~~~~ 559 (569)
.+.....+.+.+.+ ++.|+.|.+++.+.+.+ + .+|+++|++|+.+.+.|++.
T Consensus 576 ~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~l~~~e~i~~~~l~~~~~~~~~g~lT~t~K~~R~~i~~~y~~~ 647 (660)
T PLN02430 576 FTGSFEELCSLPELKEHILSELKSTAEKNKLRGFEYIKGVILETKPFDVERDLVTATLKKRRNNLLKYYQVE 647 (660)
T ss_pred CCCCHHHHhcCHHHHHHHHHHHHHHHHHhCCCCceeeeEEEEECCCCCCcCCcCChhhhhhhHHHHHHHHHH
Confidence 00011222333322 23599999999998765 3 38999999999999988864
No 71
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=2.8e-65 Score=594.40 Aligned_cols=517 Identities=22% Similarity=0.244 Sum_probs=405.1
Q ss_pred ccCHHHHHHHhhhhCCCceeeee---------CCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHH
Q 008342 19 ALTPLWFINRAATLHPTRKSVVY---------GSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFG 89 (569)
Q Consensus 19 ~~~l~~~l~~~a~~~p~~~a~~~---------~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA 89 (569)
..++.++|+++++.+|+++|+++ .++++||+||.++++++|++|.+.|+++|++|+++++|++++++++||
T Consensus 235 ~~~l~~~~~~~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~~lA 314 (1389)
T TIGR03443 235 RGAIHDIFADNAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLVVAVMG 314 (1389)
T ss_pred cCcHHHHHHHHHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHHHHHHH
Confidence 35799999999999999999986 347899999999999999999999999999999999999999999999
Q ss_pred hhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccch---HHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHH
Q 008342 90 APMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFF---SLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEY 166 (569)
Q Consensus 90 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 166 (569)
|+++|++++|++|.++.+++.++++.++++++|++.... ..+........ ........+ .+.+....
T Consensus 315 ~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~------ 384 (1389)
T TIGR03443 315 VLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKEL---ELRTEIPAL-ALQDDGSL------ 384 (1389)
T ss_pred HHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhccc---ccccccceE-Eecccccc------
Confidence 999999999999999999999999999999999876421 11111110000 000001111 11111000
Q ss_pred hhhcchhh--HHhhhhcCC--CCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEc
Q 008342 167 ALARGAIE--YEKFLETGD--PEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWT 242 (569)
Q Consensus 167 ~~~~~~~~--~~~~l~~~~--~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~ 242 (569)
..+... ..+.+.... ..........++++++|+|||||||.||||+++|+++.....+....+++.++|+++..
T Consensus 385 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~ 462 (1389)
T TIGR03443 385 --VGGSLEGGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFGLSENDKFTML 462 (1389)
T ss_pred --cccccccccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEe
Confidence 000000 001110000 00111122457899999999999999999999999999988888888899999999999
Q ss_pred CCccchhhHHHHHHHHHhcceEEEecc---CChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecC
Q 008342 243 LPMFHGNGWSYTWSLAALCGTSICLRQ---VTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAG 319 (569)
Q Consensus 243 ~p~~~~~g~~~~~~~~~~g~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g 319 (569)
.|++|..++...+.+++.|+++++.+. .++..+++.|+++++|++.++|++++.|..... .. ++++|.+++||
T Consensus 463 ~~~~~d~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~---~~-~~~lr~~~~gG 538 (1389)
T TIGR03443 463 SGIAHDPIQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQAT---TP-IPSLHHAFFVG 538 (1389)
T ss_pred cCceecchHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhccc---cc-CCCccEEEEec
Confidence 999999988888888888888877653 367899999999999999999999999875432 12 78999999999
Q ss_pred CCCCHHHHHHhhhc--CCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCC-CcccC
Q 008342 320 APPPPSLLFAMSQK--GFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDART-NQPVP 396 (569)
Q Consensus 320 ~~l~~~~~~~~~~~--~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~-~~~~~ 396 (569)
+++++...+++.+. ++++++.||+||++..++.....................++|.|++++ ++.|+|++. +++++
T Consensus 539 e~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~ivd~~~~~~~~~ 617 (1389)
T TIGR03443 539 DILTKRDCLRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNV-QLLVVNRNDRTQTCG 617 (1389)
T ss_pred ccCCHHHHHHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCC-EEEEECCccCCCcCC
Confidence 99999999888754 789999999999987655433211100000000011235689999999 699999753 56788
Q ss_pred CCCCceEEEEEecCcccccccCCcchhhhhhc-----------------------------CCeeecCceeEEcCCCeEE
Q 008342 397 ADGKTIGEIVMRGSCVMKGYLKNPKANEEAFA-----------------------------NGWFHSGDLAVKHPDNYIE 447 (569)
Q Consensus 397 ~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-----------------------------~g~~~tGD~~~~~~~g~l~ 447 (569)
.| +.|||+|+|++++.||+++++.+.+.|. ++||+|||+|++++||.++
T Consensus 618 ~G--~~GEL~i~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~~~~dG~l~ 695 (1389)
T TIGR03443 618 VG--EVGEIYVRAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGRYLPDGNVE 695 (1389)
T ss_pred CC--CceEEEecccccchhcCCChhHhhhhccCCcccCcccccccccccccccccccCCCccceeecCCceeEcCCCCEE
Confidence 87 7999999999999999999999988872 4799999999999999999
Q ss_pred EecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcchhh------------------
Q 008342 448 IKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADELD------------------ 509 (569)
Q Consensus 448 ~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~------------------ 509 (569)
|+||.||+||++|++|+|.+||.+|.+||.|.+++|++.++...++.+++++++........
T Consensus 696 ~~GR~dd~Iki~G~rI~p~eIE~~l~~~p~V~~a~v~~~~~~~~~~~lva~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 775 (1389)
T TIGR03443 696 CCGRADDQVKIRGFRIELGEIDTHLSQHPLVRENVTLVRRDKDEEPTLVSYIVPQDKSDELEEFKSEVDDEESSDPVVKG 775 (1389)
T ss_pred EecccCCEEEeCcEEecHHHHHHHHHhCcchheeEEEEeeCCCCCeEEEEEEeccCccccccccccccccccccccchhh
Confidence 99999999999999999999999999999999999998888777788999988763211100
Q ss_pred ---hhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHH
Q 008342 510 ---KGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRA 554 (569)
Q Consensus 510 ---~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~ 554 (569)
.....++++++++++||.|++|..+++.+ ||+|++||++|++|++
T Consensus 776 ~~~~~~~~~~l~~~l~~~Lp~y~~P~~~~~~~~lP~t~~GKidr~~L~~ 824 (1389)
T TIGR03443 776 LIKYRKLIKDIREYLKKKLPSYAIPTVIVPLKKLPLNPNGKVDKPALPF 824 (1389)
T ss_pred hhhhhhhHHHHHHHHHhhCCcccCCceEEEcccCCCCCCccccHhhcCC
Confidence 01135789999999999999999998777 9999999999999964
No 72
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.9e-64 Score=532.88 Aligned_cols=522 Identities=26% Similarity=0.317 Sum_probs=413.8
Q ss_pred cccccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCc
Q 008342 16 NYTALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGA 95 (569)
Q Consensus 16 ~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 95 (569)
.....++.++|+++++.+|+++|+.+.++++||.||.+++.++|.+|.+.|+++|++|+++++|+++++++++||+++|+
T Consensus 29 ~~~~~~l~~~l~~~a~~~p~~~al~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 108 (567)
T PRK06178 29 PHGERPLTEYLRAWARERPQRPAIIFYGHVITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFHIVFFGILKLGA 108 (567)
T ss_pred CcCcccHHHHHHHHHHHCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHHHHHHHHHHhCe
Confidence 34457899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchh--hhHHh--hh--
Q 008342 96 VLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSK--QLEYA--LA-- 169 (569)
Q Consensus 96 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~--~~-- 169 (569)
+++|++|..+..++.++++.++++++++++...+.+....... ....++.......... ..... ..
T Consensus 109 ~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~--------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 180 (567)
T PRK06178 109 VHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAET--------SLRHVIVTSLADVLPAEPTLPLPDSLRAP 180 (567)
T ss_pred EEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccC--------CcceEEEeccccccccccccccccccccc
Confidence 9999999999999999999999999999988766555443221 1223332221110000 00000 00
Q ss_pred -cchhhHHhhhhcCC--CCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHh-HhCCCCCcEEEEcCCc
Q 008342 170 -RGAIEYEKFLETGD--PEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGAL-IWGMNEGAVFLWTLPM 245 (569)
Q Consensus 170 -~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~-~~~~~~~d~~~~~~p~ 245 (569)
.....+.+++.... +..........+++++++|||||||.||+|.+||.+++........ .....++|+++..+|+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~ 260 (567)
T PRK06178 181 RLAAAGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVVGGEDSVFLSFLPE 260 (567)
T ss_pred cccccccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhccCCCCcEEEEecch
Confidence 00011111211111 1111122345789999999999999999999999998876555443 3567889999999999
Q ss_pred cchhhHHH-HHHHHHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeee--cCCCC
Q 008342 246 FHGNGWSY-TWSLAALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNT--AGAPP 322 (569)
Q Consensus 246 ~~~~g~~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~--~g~~l 322 (569)
+|.+|+.. .+..+..|+++++.+++++..+++.++++++|.+.++|..+..+.......... +.+++.+.. .++.+
T Consensus 261 ~~~~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~-l~~l~~~~~~~~~~~~ 339 (567)
T PRK06178 261 FWIAGENFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYD-LSSLRQVRVVSFVKKL 339 (567)
T ss_pred HHHHHHHHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCC-cchheeeeeccccccC
Confidence 99999854 445566777888878889999999999999999999999999888764333333 667777543 45899
Q ss_pred CHHHHHHhhhc-CCeEec-ccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCC
Q 008342 323 PPSLLFAMSQK-GFRITH-TYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGK 400 (569)
Q Consensus 323 ~~~~~~~~~~~-~~~i~~-~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~ 400 (569)
++++.+.+++. +..++. .||+||+++.+.......... ........++|.|++++ +++++|++++.+++.+
T Consensus 340 ~~~~~~~~~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~~~----~~~~~~~~~vG~p~~g~-~v~v~d~~~~~~~~~g-- 412 (567)
T PRK06178 340 NPDYRQRWRALTGSVLAEAAWGMTETHTCDTFTAGFQDDD----FDLLSQPVFVGLPVPGT-EFKICDFETGELLPLG-- 412 (567)
T ss_pred CHHHHHHHHHHhCCcccccccccccccccceeccccccCc----cccccCCcccccccCCc-EEEEEcCCCCCcCCCC--
Confidence 99999998854 766665 799999986544332111000 00112346789999999 6999997789999987
Q ss_pred ceEEEEEecCcccccccCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCcee
Q 008342 401 TIGEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLE 480 (569)
Q Consensus 401 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~ 480 (569)
+.|||+++|++++.||+++++.+...|.+|||+|||+++++++|++++.||.+|+|+.+|.+++|.+||+++.+++.|.+
T Consensus 413 ~~Gel~v~g~~v~~gY~~~~~~~~~~~~dg~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~eiE~~l~~~~~v~~ 492 (567)
T PRK06178 413 AEGEIVVRTPSLLKGYWNKPEATAEALRDGWLHTGDIGKIDEQGFLHYLGRRKEMLKVNGMSVFPSEVEALLGQHPAVLG 492 (567)
T ss_pred CceEEEEECCcccccccCChhhhhhcccCCceeecceEEEecCCeEEEEecccccEEECCEEECHHHHHHHHHhCCCeeE
Confidence 78999999999999999999999888999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHhc
Q 008342 481 AAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKEM 559 (569)
Q Consensus 481 ~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~ 559 (569)
+++++.+++..|+.+++++++.++... ..+++.++++++++.+++|. +.+++ ||+|++||++|++|++++.+.
T Consensus 493 ~~v~~~~~~~~g~~~~~~v~~~~~~~~-----~~~~l~~~~~~~l~~~~~p~-i~~v~~iP~t~~GKv~r~~l~~~~~~~ 566 (567)
T PRK06178 493 SAVVGRPDPDKGQVPVAFVQLKPGADL-----TAAALQAWCRENMAVYKVPE-IRIVDALPMTATGKVRKQDLQALAEEL 566 (567)
T ss_pred EEEEcCcCcccCcceEEEEEeCCCCcC-----CHHHHHHHHHhcCcccCCce-EEEeccCCCCCccceeHHHHHHHHHhh
Confidence 999999888888889999988765433 45789999999999999997 55555 999999999999999998765
No 73
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.1e-64 Score=537.07 Aligned_cols=506 Identities=23% Similarity=0.288 Sum_probs=395.8
Q ss_pred cccccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCc
Q 008342 16 NYTALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGA 95 (569)
Q Consensus 16 ~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 95 (569)
...+.|+.++|.++++++|+++|+++.++.+||+||.+++.++|.+|.+.|+++|++|+++++|++++++++|||+++|+
T Consensus 33 ~~~~~tl~~~l~~~a~~~p~~~Ai~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~~G~ 112 (600)
T PRK08279 33 PDSKRSLGDVFEEAAARHPDRPALLFEDQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAKLGA 112 (600)
T ss_pred CCCcccHHHHHHHHHHhCCCCcEEEeCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCc
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhH
Q 008342 96 VLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEY 175 (569)
Q Consensus 96 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 175 (569)
+++++++.++.+++.++++.++++++|++++....+........ ....++..++.... ....+..+
T Consensus 113 ~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~-------~~~~~~~~ 178 (600)
T PRK08279 113 VVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLA-------RPPRLWVAGGDTLD-------DPEGYEDL 178 (600)
T ss_pred EEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhc-------ccceEEEecCcccc-------ccccHHHH
Confidence 99999999999999999999999999999887666655433332 11222222221100 01111222
Q ss_pred HhhhhcCCCC-CCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHH
Q 008342 176 EKFLETGDPE-FAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYT 254 (569)
Q Consensus 176 ~~~l~~~~~~-~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~ 254 (569)
.++....... .........+++++|+|||||||.||+|.+||+++..........+++.++|++++.+|++|.+|+...
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~~~d~~l~~~pl~h~~g~~~~ 258 (600)
T PRK08279 179 AAAAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTPDDVLYCCLPLYHNTGGTVA 258 (600)
T ss_pred hhhcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCCCCcEEEEecCchhhhhHHHH
Confidence 2222211111 111223467899999999999999999999999999998888888899999999999999999999877
Q ss_pred HHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhh-
Q 008342 255 WSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQ- 332 (569)
Q Consensus 255 ~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~- 332 (569)
+..++.+|+.+++ +.+++..+++.++++++|++.++|++++.+.......... ..+++. ++|+.+++++.+++.+
T Consensus 259 ~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~-~~~l~~--~~g~~l~~~~~~~~~~~ 335 (600)
T PRK08279 259 WSSVLAAGATLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTDR-DHRLRL--MIGNGLRPDIWDEFQQR 335 (600)
T ss_pred HHHHHhcCcEEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCcccc-CcceeE--EecCCCCHHHHHHHHHH
Confidence 7776665555555 6789999999999999999999999999998765443333 456665 3477899999999885
Q ss_pred cCC-eEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceee----ccC--------CceeeeCCCCc--ccCC
Q 008342 333 KGF-RITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTI----CLD--------GLDVIDARTNQ--PVPA 397 (569)
Q Consensus 333 ~~~-~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~----~~~--------~~~i~d~~~~~--~~~~ 397 (569)
++. ++++.||+||++....... ....++|.+.+ ... +..+.+.+ +. .++.
T Consensus 336 ~~~~~l~~~YG~tE~~~~~~~~~--------------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~ 400 (600)
T PRK08279 336 FGIPRILEFYAASEGNVGFINVF--------------NFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDAD-GRCIKVKP 400 (600)
T ss_pred hCcceeeeeecccccceeecccC--------------CCCcccccccccccccceeeeeccCcCceeeCCC-CccccCCC
Confidence 454 6999999999875332211 01133443333 110 12233332 32 3444
Q ss_pred CCCceEEEE--EecCcccccccCCcchhhhhh-------cCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHH
Q 008342 398 DGKTIGEIV--MRGSCVMKGYLKNPKANEEAF-------ANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEV 468 (569)
Q Consensus 398 ~~~~~Gel~--v~~~~~~~gy~~~~~~~~~~~-------~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~i 468 (569)
+ +.||++ +.++.++.|| +++..+...| .++||+|||+|++++||.+++.||.||+|+++|.+|+|.+|
T Consensus 401 g--~~Gel~~~i~~~~~~~GY-~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik~~G~~i~p~eI 477 (600)
T PRK08279 401 G--EVGLLIGRITDRGPFDGY-TDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTFRWKGENVATTEV 477 (600)
T ss_pred C--CceeEEEEecCccccccc-CCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCCeEEECCcccCHHHH
Confidence 4 789998 6789999999 8887777665 25799999999999999999999999999999999999999
Q ss_pred HHHHhcCCCceeeEEEeecCCCC-CceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCc
Q 008342 469 EKVLYLHPLVLEAAVVARPDERW-GESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGK 546 (569)
Q Consensus 469 E~~l~~~~~v~~~~v~~~~~~~~-g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GK 546 (569)
|++|.++|+|.+|+|++.+.+.. +...+++++..++... ..+++.++|+++|+.|++|..+++++ ||+|++||
T Consensus 478 E~~l~~~p~V~~a~v~gv~~~~~~~~~~~~~vv~~~~~~~-----~~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GK 552 (600)
T PRK08279 478 ENALSGFPGVEEAVVYGVEVPGTDGRAGMAAIVLADGAEF-----DLAALAAHLYERLPAYAVPLFVRLVPELETTGTFK 552 (600)
T ss_pred HHHHhcCCCcceEEEEEeecCCCCCccceeEEEecCCccC-----CHHHHHHHHHhhCccccCCeEEEeecCCCCCcchh
Confidence 99999999999999999876653 4445666666543322 45789999999999999999999877 99999999
Q ss_pred ccHHHHHHHHHhcCC
Q 008342 547 IQKHLLRAKAKEMGP 561 (569)
Q Consensus 547 i~r~~l~~~~~~~~~ 561 (569)
++|++|++++.+...
T Consensus 553 i~r~~L~~~~~~~~~ 567 (600)
T PRK08279 553 YRKVDLRKEGFDPSK 567 (600)
T ss_pred hhHHHHhhcCCCccc
Confidence 999999988777643
No 74
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.5e-64 Score=531.64 Aligned_cols=514 Identities=26% Similarity=0.395 Sum_probs=411.7
Q ss_pred ccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEe
Q 008342 19 ALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLN 98 (569)
Q Consensus 19 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (569)
.+++.+++++++..+|+++|+++.++++||+||.+++.++|++|.+.|+++||+|+++++|++++++++|||+++|++++
T Consensus 23 ~~~~~~~~~~~a~~~p~~~a~~~~~~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 102 (563)
T PRK06710 23 IQPLHKYVEQMASRYPEKKALHFLGKDITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLAGGIVV 102 (563)
T ss_pred cccHHHHHHHHHHHCCCceEEEecCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHcCeEEe
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCc---chhh------------
Q 008342 99 SINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESC---DSKQ------------ 163 (569)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~------------ 163 (569)
|++|.++.+++.++++.++++++++++............. ....++....... ....
T Consensus 103 pi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (563)
T PRK06710 103 QTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSAT--------KIEHVIVTRIADFLPFPKNLLYPFVQKKQSNL 174 (563)
T ss_pred ccCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhh--------ccceeEEeccccccccccccccchhhcccccc
Confidence 9999999999999999999999999886554433221111 1122221110000 0000
Q ss_pred -hHHhhhcchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHh-HhCCC-CCcEEE
Q 008342 164 -LEYALARGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGAL-IWGMN-EGAVFL 240 (569)
Q Consensus 164 -~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~-~~~~~-~~d~~~ 240 (569)
...........|..+........ .......+++++++|||||||.||+|.++|++++........ .++.. .+++++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~l 253 (563)
T PRK06710 175 VVKVSESETIHLWNSVEKEVNTGV-EVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVL 253 (563)
T ss_pred cccccccchhhhhhhhhhcccccc-ccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCceEE
Confidence 00000000011222211111110 011123578999999999999999999999998765433333 23333 456888
Q ss_pred EcCCccchhhHHHHH-HHHHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecC
Q 008342 241 WTLPMFHGNGWSYTW-SLAALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAG 319 (569)
Q Consensus 241 ~~~p~~~~~g~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g 319 (569)
+.+|++|.+|+...+ ..+..|+++++.+.+++..+++.|+++++|++.++|+++..+.......... ++++|.+++||
T Consensus 254 ~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~lr~v~~gg 332 (563)
T PRK06710 254 GVLPFFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYD-ISSIRACISGS 332 (563)
T ss_pred EeCchHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCC-hhhhhheeeCC
Confidence 999999999886544 4455677777777889999999999999999999999999998765443333 78999999999
Q ss_pred CCCCHHHHHHhhh-cCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCC
Q 008342 320 APPPPSLLFAMSQ-KGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPAD 398 (569)
Q Consensus 320 ~~l~~~~~~~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~ 398 (569)
+++++++.+++.+ ++.++++.||+||+++.+..+... .....+++|.+.+++ .++++|++++.+++.|
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~----------~~~~~~~~G~~~~~~-~~~i~~~~~~~~~~~g 401 (563)
T PRK06710 333 APLPVEVQEKFETVTGGKLVEGYGLTESSPVTHSNFLW----------EKRVPGSIGVPWPDT-EAMIMSLETGEALPPG 401 (563)
T ss_pred CcCCHHHHHHHHHhhCCCEecccccccCccccccCccc----------ccccCCccCCCCCCC-eEEEEECCCCccCCCC
Confidence 9999999999885 489999999999998755432210 111235789999998 5999998889999888
Q ss_pred CCceEEEEEecCcccccccCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCc
Q 008342 399 GKTIGEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLV 478 (569)
Q Consensus 399 ~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v 478 (569)
+.|||+++|+.++.||+++++.+...|.+|||+|||+++++++|.+++.||.||+|+.+|.+|+|.+||++|.++|.|
T Consensus 402 --~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~eiE~~l~~~~~v 479 (563)
T PRK06710 402 --EIGEIVVKGPQIMKGYWNKPEETAAVLQDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKV 479 (563)
T ss_pred --CceEEEEecCccchhhhCChHHHhhhcccCcccccceEEEcCCCcEEEeeccccEEEECCEEECHHHHHHHHHhCcce
Confidence 789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHH
Q 008342 479 LEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAK 557 (569)
Q Consensus 479 ~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~ 557 (569)
.+++|++.+++..|+.+.++++..++... +.+++.++++++++.+++|..+.+++ ||+|++||++|+.|++++.
T Consensus 480 ~~~~v~~~~~~~~g~~~~~~v~~~~~~~~-----~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKi~r~~L~~~~~ 554 (563)
T PRK06710 480 QEVVTIGVPDPYRGETVKAFVVLKEGTEC-----SEEELNQFARKYLAAYKVPKVYEFRDELPKTTVGKILRRVLIEEEK 554 (563)
T ss_pred eeEEEEccccCCcCceeEEEEEECCCCCC-----CHHHHHHHHHHhcccccCCcEEEEcccCCCCccchhhHHHHHHHHh
Confidence 99999999988888999999988776433 45789999999999999999998877 9999999999999999887
Q ss_pred hcC
Q 008342 558 EMG 560 (569)
Q Consensus 558 ~~~ 560 (569)
...
T Consensus 555 ~~~ 557 (563)
T PRK06710 555 RKN 557 (563)
T ss_pred hcC
Confidence 543
No 75
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.7e-64 Score=525.84 Aligned_cols=478 Identities=25% Similarity=0.332 Sum_probs=398.0
Q ss_pred cccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceE
Q 008342 18 TALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVL 97 (569)
Q Consensus 18 ~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 97 (569)
.+.++.+.|.+++..+|+++|+.+.++.+||+||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 33 ~~~~~~~~~~~~a~~~p~~~a~~~~~~~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~v~ 112 (516)
T PRK13383 33 GGTNPYTLLAVTAARWPGRTAIIDDDGALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLLGADV 112 (516)
T ss_pred cCCcHHHHHHHHHHHCCCCcEEEeCCCcEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEE
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHh
Q 008342 98 NSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEK 177 (569)
Q Consensus 98 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (569)
+|+++.++.+++.++++.+++++++++++....+... ...++.++... ....
T Consensus 113 vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-------------~~~~~~~~~~~--------------~~~~- 164 (516)
T PRK13383 113 VPISTEFRSDALAAALRAHHISTVVADNEFAERIAGA-------------DDAVAVIDPAT--------------AGAE- 164 (516)
T ss_pred EEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhh-------------hcceEEeccch--------------hhhh-
Confidence 9999999999999999999999999988755443221 01222222110 0000
Q ss_pred hhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHH--HHHhHhHhCCCCCcEEEEcCCccchhhHHHHH
Q 008342 178 FLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLM--SLNGALIWGMNEGAVFLWTLPMFHGNGWSYTW 255 (569)
Q Consensus 178 ~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~--~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~ 255 (569)
.... .+...++.++++|||||||.||+|.++|...... .......+++.++|+++..+|++|.+|+...+
T Consensus 165 ----~~~~----~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~ 236 (516)
T PRK13383 165 ----ESGG----RPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLGMLM 236 (516)
T ss_pred ----cCCC----CCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHHHHH
Confidence 0000 1122346678999999999999999999743211 12233456788999999999999999998877
Q ss_pred HHHHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCC-CCCCcccceeeeecCCCCCHHHHHHhhh-c
Q 008342 256 SLAALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPED-TILPLTNVVNVNTAGAPPPPSLLFAMSQ-K 333 (569)
Q Consensus 256 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-~~~~l~~l~~~~~~g~~l~~~~~~~~~~-~ 333 (569)
.++..|++++....+++..+++.++++++|.+.++|.++..+....... ....++++|.+++||+++++++.+++.+ +
T Consensus 237 ~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~ 316 (516)
T PRK13383 237 LTIALGGTVLTHRHFDAEAALAQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSGDRLDPTLGQRFMDTY 316 (516)
T ss_pred HHHhcCCEEEECCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECCCCCCHHHHHHHHHHc
Confidence 7778888888777889999999999999999999999999998754321 1112789999999999999999999885 5
Q ss_pred CCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCccc
Q 008342 334 GFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVM 413 (569)
Q Consensus 334 ~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~ 413 (569)
+.++++.||+||++..+..+.. .......++|.|.+++ +++|+|++ +++++.+ +.|||+++|++++
T Consensus 317 g~~v~~~YG~tE~~~~~~~~~~----------~~~~~~~~~G~~~~~~-~~~i~d~~-~~~~~~g--~~Gel~v~g~~~~ 382 (516)
T PRK13383 317 GDILYNGYGSTEVGIGALATPA----------DLRDAPETVGKPVAGC-PVRILDRN-NRPVGPR--VTGRIFVGGELAG 382 (516)
T ss_pred Cchhhhcccccccccceecccc----------ccccCCCcccCCCCCc-EEEEECCC-CCCCCCC--CceEEEEecCccc
Confidence 8999999999999865443321 1112346899999999 69999976 8888877 7899999999999
Q ss_pred ccccCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCCCCc
Q 008342 414 KGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGE 493 (569)
Q Consensus 414 ~gy~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~ 493 (569)
.+|++.+. ..+.+|||+|||+++++++|++++.||.+|+|+++|.+|+|.+||++|.++|.|.++++++.+++..|+
T Consensus 383 ~~Y~~~~~---~~~~~g~~~TGDl~~~d~~G~l~i~GR~~~~i~~~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~g~ 459 (516)
T PRK13383 383 TRYTDGGG---KAVVDGMTSTGDMGYLDNAGRLFIVGREDDMIISGGENVYPRAVENALAAHPAVADNAVIGVPDERFGH 459 (516)
T ss_pred ccccCCch---hheecCceecceeEEEcCCccEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCc
Confidence 99998653 345689999999999999999999999999999999999999999999999999999999999888889
Q ss_pred eeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHH
Q 008342 494 SPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLR 553 (569)
Q Consensus 494 ~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~ 553 (569)
.+.++|++.+.... ..+++.++++++++.|++|..+.+++ ||+|++||++|++|+
T Consensus 460 ~~~~~v~~~~~~~~-----~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~gKi~r~~L~ 515 (516)
T PRK13383 460 RLAAFVVLHPGSGV-----DAAQLRDYLKDRVSRFEQPRDINIVSSIPRNPTGKVLRKELP 515 (516)
T ss_pred eEEEEEEECCCCCC-----CHHHHHHHHHHhcccCCCCcEEEEeCCCCCCCCCcCcHHHhC
Confidence 99999998765433 45789999999999999999998777 999999999999874
No 76
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=9.7e-65 Score=532.81 Aligned_cols=489 Identities=20% Similarity=0.202 Sum_probs=374.6
Q ss_pred cC-HHHHHHHhhhhCCCceeeeeCC----eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcC
Q 008342 20 LT-PLWFINRAATLHPTRKSVVYGS----KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAG 94 (569)
Q Consensus 20 ~~-l~~~l~~~a~~~p~~~a~~~~~----~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 94 (569)
|+ +.+.|++++.++|+++|+++.+ +++||+||.++++++|++|.++ ++||+|+++++|++++++++|||+++|
T Consensus 1 ~~~~~~~l~~~~~~~~~~~a~~~~~~~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~~~G 78 (525)
T PRK05851 1 MNELAAALSDAMTASGRDLVVLDRESGLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAWLAG 78 (525)
T ss_pred CchHHHHHHHHhcCCCCceEEeCCCCCcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHHHcC
Confidence 45 8899999999999999999987 8899999999999999999987 799999999999999999999999999
Q ss_pred ceEeecccc--------CCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHH
Q 008342 95 AVLNSINIR--------LNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEY 166 (569)
Q Consensus 95 ~~~v~l~~~--------~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 166 (569)
+++++ ++. ...+++.++++.++++++|++......+.... . . +.+.+.
T Consensus 79 ~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~---~--------~---~~~~~~--------- 134 (525)
T PRK05851 79 AAVSI-LPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVD---S--------S---VTVHDL--------- 134 (525)
T ss_pred CCCcC-CCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhh---c--------c---cccccc---------
Confidence 98653 332 22355667889999999999876544332211 0 0 001000
Q ss_pred hhhcchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCC-CCcEEEEcCCc
Q 008342 167 ALARGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMN-EGAVFLWTLPM 245 (569)
Q Consensus 167 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~-~~d~~~~~~p~ 245 (569)
........ .... ....++++++|+|||||||.||+|.++|.++...+......+++. ++|++++.+|+
T Consensus 135 ---------~~~~~~~~-~~~~-~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~d~~l~~~pl 203 (525)
T PRK05851 135 ---------ATAAHTNR-SASL-TPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLDAATDVGCSWLPL 203 (525)
T ss_pred ---------cccccccc-cccC-CCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCCCCeEEEcCCC
Confidence 00000000 0000 123568999999999999999999999999999888888888888 99999999999
Q ss_pred cchhhHHHHHHHHHhcceEEEecc--C--ChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCC
Q 008342 246 FHGNGWSYTWSLAALCGTSICLRQ--V--TAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAP 321 (569)
Q Consensus 246 ~~~~g~~~~~~~~~~g~~~~~~~~--~--~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~ 321 (569)
+|.+|+...+.+++.|+++++.+. + ++..+++.++++++|++...|.++..+.+.........++++|.+++||++
T Consensus 204 ~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~~~~l~~lr~~~~gG~~ 283 (525)
T PRK05851 204 YHDMGLAFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVSDVDLGALRVALNGGEP 283 (525)
T ss_pred ccCccHHHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccccCCCHHHhheeEecccc
Confidence 999999877777788888877652 3 577899999999999886555555555433222111227899999999999
Q ss_pred CCHHHHHHhhh----cCC---eEecccccccCCCCccccccCCCCCC--C--CchhhhhccccCCceeeccCCceeeeCC
Q 008342 322 PPPSLLFAMSQ----KGF---RITHTYGLTELTGPASVCAWKPEWDS--L--PFETQARLNARQGVRTICLDGLDVIDAR 390 (569)
Q Consensus 322 l~~~~~~~~~~----~~~---~i~~~YG~tE~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~G~~~~~~~~~~i~d~~ 390 (569)
+++++.+++.+ +|+ ++++.||+||++..++.......... . ..........++|.|++++ +++|+|++
T Consensus 284 l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~-~v~i~d~~ 362 (525)
T PRK05851 284 VDCDGFERFATAMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGM-EVRISPGD 362 (525)
T ss_pred CCHHHHHHHHHHHhhcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCc-EEEEECCC
Confidence 99999888864 344 59999999999765543221110000 0 0000112346799999999 69999988
Q ss_pred CCcccCCCCCceEEEEEecCcccccccCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHH
Q 008342 391 TNQPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEK 470 (569)
Q Consensus 391 ~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~ 470 (569)
++.+++.+ +.|||+++|++++.||++++..+ .+|||+|||+|+++ +|.++++||.||+|+++|++|+|.+||+
T Consensus 363 ~~~~~~~g--~~GEl~v~g~~~~~GY~~~~~~~----~~~~~~TGDl~~~~-~G~l~~~GR~dd~i~~~G~~v~p~eIE~ 435 (525)
T PRK05851 363 GAAGVAGR--EIGEIEIRGASMMSGYLGQAPID----PDDWFPTGDLGYLV-DGGLVVCGRAKELITVAGRNIFPTEIER 435 (525)
T ss_pred CCccCCCC--CeEEEEEecCchhhccccCCccC----CCCceeccceEEEE-CCEEEEEeecCCEEEECCEEeCHHHHHH
Confidence 66678877 78999999999999999988643 37899999999997 7999999999999999999999999999
Q ss_pred HHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCC--cCCceEEecc---CCCCCCC
Q 008342 471 VLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSY--WVPKSVVFAA---LPKSATG 545 (569)
Q Consensus 471 ~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~--~~p~~i~~~~---lP~t~~G 545 (569)
+|.+||.|.+++|++.+++..++.+.++++...... ..+.+.++++++++.+ ++|..+.+++ ||+|++|
T Consensus 436 ~l~~~p~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~------~~~~~~~~~~~~l~~~l~~~P~~~~~v~~~~lP~t~~G 509 (525)
T PRK05851 436 VAAQVRGVREGAVVAVGTGEGSARPGLVIAAEFRGP------DEAGARSEVVQRVASECGVVPSDVVFVAPGSLPRTSSG 509 (525)
T ss_pred HHHhCCCcccceEEEEEecCCCCceeEEEEEEecCc------chHHHHHHHHHHHHHHhCCCccEEEEECCCCcCcCcch
Confidence 999999999999999988887877776665442111 1234445555555554 8998888664 9999999
Q ss_pred cccHHHHHHHHHhc
Q 008342 546 KIQKHLLRAKAKEM 559 (569)
Q Consensus 546 Ki~r~~l~~~~~~~ 559 (569)
|++|++|++.+.+.
T Consensus 510 Ki~r~~L~~~~~~~ 523 (525)
T PRK05851 510 KLRRLAVKRSLEAA 523 (525)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999988764
No 77
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=2.9e-64 Score=546.93 Aligned_cols=495 Identities=18% Similarity=0.230 Sum_probs=389.7
Q ss_pred cccCHHHHHHHhhhhCCC-ceeeeeCC-eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCc
Q 008342 18 TALTPLWFINRAATLHPT-RKSVVYGS-KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGA 95 (569)
Q Consensus 18 ~~~~l~~~l~~~a~~~p~-~~a~~~~~-~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 95 (569)
+..|+.++|+++++++|+ ++|+.+.+ +++||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|+
T Consensus 202 ~~~t~~~~l~~~~~~~p~~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~lA~~~~G~ 280 (718)
T PRK08043 202 PRETLYEALLSAQYRYGAGKPCIEDVNFTPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVIFGASLRRR 280 (718)
T ss_pred CCCCHHHHHHHHHHHhCCCCcceEcCCCCcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHHHHHHHcCC
Confidence 457899999999999998 68887644 7899999999999999999887 59999999999999999999999999999
Q ss_pred eEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHH--HHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchh
Q 008342 96 VLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAE--EALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAI 173 (569)
Q Consensus 96 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 173 (569)
+++|+++.++.+++.+++++++++++|++.+..+... .....+. ...++.+++..... .. .....
T Consensus 281 v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~--------~~~~i~~~~~~~~~-~~----~~~~~ 347 (718)
T PRK08043 281 IPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLT--------QVRWVYLEDLKDDV-TT----ADKLW 347 (718)
T ss_pred cccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhc--------cccEEEhhhhhhhc-ch----hHHHH
Confidence 9999999999999999999999999999876543211 0000010 11222222210000 00 00000
Q ss_pred hHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHH
Q 008342 174 EYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSY 253 (569)
Q Consensus 174 ~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~ 253 (569)
...+... +. .......++++++++|||||||.||+|.+||.++..........+++.++|++++.+|++|.+|+..
T Consensus 348 ~~~~~~~---~~-~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~g~~~ 423 (718)
T PRK08043 348 IFAHLLM---PR-LAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTPNDRFMSALPLFHSFGLTV 423 (718)
T ss_pred HHHHHhC---Cc-cccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhCCCccCeEEEcCcchhhhhhHH
Confidence 0001000 00 0112245689999999999999999999999999988887777888999999999999999999865
Q ss_pred HH-HHHHhcceEEEecc-CChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhh
Q 008342 254 TW-SLAALCGTSICLRQ-VTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMS 331 (569)
Q Consensus 254 ~~-~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~ 331 (569)
.+ ..+..|+++++.+. +++..+++.++++++|++.++|+++..+.+... ... ++++|.+++||+++++++.+.++
T Consensus 424 ~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~--~~~-~~~lr~i~~gg~~l~~~~~~~~~ 500 (718)
T PRK08043 424 GLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFAN--PYD-FARLRYVVAGAEKLQESTKQLWQ 500 (718)
T ss_pred HHHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhcC--ccc-ccceEEEEEeCccCCHHHHHHHH
Confidence 44 44556776666653 567788999999999999999999988766421 222 78999999999999999999988
Q ss_pred h-cCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecC
Q 008342 332 Q-KGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGS 410 (569)
Q Consensus 332 ~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~ 410 (569)
+ +|+++++.||+||+++.++.... .....+++|.|++++ +++++|.+ +. + +.|||+++|+
T Consensus 501 ~~~g~~l~~~YG~TE~~~~~~~~~~-----------~~~~~~svG~p~pg~-~~~i~d~~-~~----~--~~Gel~v~g~ 561 (718)
T PRK08043 501 DKFGLRILEGYGVTECAPVVSINVP-----------MAAKPGTVGRILPGM-DARLLSVP-GI----E--QGGRLQLKGP 561 (718)
T ss_pred HHcCCCeecccCcccccceEEecCC-----------cccCCCCCCCcCCCC-eeEEecCC-CC----C--CceEEEEecC
Confidence 4 59999999999999866543221 012347899999999 69999865 32 2 4599999999
Q ss_pred cccccccCC--cch-------hhh-hhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCcee
Q 008342 411 CVMKGYLKN--PKA-------NEE-AFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLE 480 (569)
Q Consensus 411 ~~~~gy~~~--~~~-------~~~-~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~ 480 (569)
+++.||+++ ++. +.. .+.+|||+|||+|++|+||++++.||.||+|+++|++|+|.+||+++.+++.+.+
T Consensus 562 ~v~~GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~~~~~~ 641 (718)
T PRK08043 562 NIMNGYLRVEKPGVLEVPTAENARGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKQ 641 (718)
T ss_pred CccccccCCCCcccccccccccccccccCCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCHHHHHHHHHhCCccce
Confidence 999999983 332 111 2357999999999999999999999999999999999999999999999998888
Q ss_pred eEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhc-CCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHh
Q 008342 481 AAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAK-MPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKE 558 (569)
Q Consensus 481 ~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~-l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~ 558 (569)
++|++.+++..|+.+++++. .. .. ..+++.++++++ |+.|++|..+.+++ ||+|++||++|++|++++.+
T Consensus 642 ~avv~~~~~~~ge~~v~~~~-~~--~~-----~~~~l~~~~~~~~l~~~~vP~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 713 (718)
T PRK08043 642 HATAIKSDASKGEALVLFTT-DS--EL-----TREKLQQYAREHGVPELAVPRDIRYLKQLPLLGSGKPDFVTLKSMVDE 713 (718)
T ss_pred EEEEEccCCCCCceEEEEEc-Cc--cc-----CHHHHHHHHHhcCCCcccCCceEEEecccCcCCCCCcCHHHHHHHHhc
Confidence 88899888888888887764 11 11 346799999987 99999999999877 99999999999999998876
Q ss_pred cC
Q 008342 559 MG 560 (569)
Q Consensus 559 ~~ 560 (569)
..
T Consensus 714 ~~ 715 (718)
T PRK08043 714 PE 715 (718)
T ss_pred cc
Confidence 44
No 78
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=3.9e-64 Score=503.45 Aligned_cols=506 Identities=23% Similarity=0.322 Sum_probs=417.6
Q ss_pred HHHHHhhhhC-CCceeeeeCC------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCce
Q 008342 24 WFINRAATLH-PTRKSVVYGS------KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAV 96 (569)
Q Consensus 24 ~~l~~~a~~~-p~~~a~~~~~------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 96 (569)
.+++++.+.. ++.+++++.+ ..+||.|+.+++.++|+.|.+.|+++||+|++++|+.++++++++||.++|++
T Consensus 68 n~~~~~~~~~~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ia~lA~~r~Gai 147 (626)
T KOG1175|consen 68 NCLDRHIKEKGGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVIAMLACARIGAI 147 (626)
T ss_pred hhhhhhhhhcCCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHHHHHHHhhcCeE
Confidence 4556664444 8888988753 44999999999999999999999999999999999999999999999999999
Q ss_pred EeeccccCCHHHHHHHHhcCCceEEEEcccchH---------HHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHh
Q 008342 97 LNSINIRLNATVVAFILSHASSAVVIVDQEFFS---------LAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYA 167 (569)
Q Consensus 97 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 167 (569)
.+++...+++.++...+++.+++++|+.+.... ...++...+..... .....+.+.+..
T Consensus 148 ~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~---~~~~~~~~~~~~--------- 215 (626)
T KOG1175|consen 148 HSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSR---PVWLDLIVSRRN--------- 215 (626)
T ss_pred EEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhccccccc---ccceeeEEeccc---------
Confidence 999999999999999999999999999764322 22222222221100 111111111111
Q ss_pred hhcchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHH-HHHHHHhHhHhCCCCCcEEEEcCCcc
Q 008342 168 LARGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGA-YLMSLNGALIWGMNEGAVFLWTLPMF 246 (569)
Q Consensus 168 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~-~~~~~~~~~~~~~~~~d~~~~~~p~~ 246 (569)
....|+.++....+..+ ..+...+|+.+|+|||||||.||++.+++... +..+......++++++|++.+...+.
T Consensus 216 ---~d~~~~~~~~~a~~~~~-~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~G 291 (626)
T KOG1175|consen 216 ---RDLFWSLELKKASPEHP-CVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLG 291 (626)
T ss_pred ---ccccHHHHhhhcCCCCC-ceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccC
Confidence 13566776666666555 34567889999999999999999999999875 44445555678999999999999999
Q ss_pred chhhHHHHHH-HHHhcceEEEe--ccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCC-cccceeeeecCCCC
Q 008342 247 HGNGWSYTWS-LAALCGTSICL--RQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILP-LTNVVNVNTAGAPP 322 (569)
Q Consensus 247 ~~~g~~~~~~-~~~~g~~~~~~--~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~-l~~l~~~~~~g~~l 322 (569)
|+.|.++.+. .++.|++++++ .++++..+++++.++++|++++.|+.++.|.+......... +++||.+.++||++
T Consensus 292 Wi~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~Gepi 371 (626)
T KOG1175|consen 292 WITGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSVGEPI 371 (626)
T ss_pred eeeccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEeecCccC
Confidence 9999988777 45556666666 34589999999999999999999999998877755443321 47799999999999
Q ss_pred CHHHHHHhhhc-CC-eEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCC
Q 008342 323 PPSLLFAMSQK-GF-RITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGK 400 (569)
Q Consensus 323 ~~~~~~~~~~~-~~-~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~ 400 (569)
.++..+++.+. +. +|++.||+||+|+.++.+..+.. ...+++.+.|.++. .+.|+|++ |..++.++
T Consensus 372 ~~~~~ew~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~~---------p~~pg~~~~p~~g~-~v~i~de~-g~~~~~~~- 439 (626)
T KOG1175|consen 372 NPEAWEWWKRVTGLDPIYETYGQTETGGICITPKPGKL---------PIKPGSAGKPFPGY-DVQILDEN-GNELPPST- 439 (626)
T ss_pred CcchHHHHHHhcCccchhhceeeeccCceeeeccCCCC---------CcCccccCCCCCCc-ceEEECCC-CCCcCCCC-
Confidence 99999999855 66 69999999999999988764321 34568999999999 59999995 88888765
Q ss_pred ceEEEEEecC---cccccccCCcc-hhhhhhc--CCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhc
Q 008342 401 TIGEIVMRGS---CVMKGYLKNPK-ANEEAFA--NGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYL 474 (569)
Q Consensus 401 ~~Gel~v~~~---~~~~gy~~~~~-~~~~~~~--~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~ 474 (569)
+.|+|+++.+ +++++||++++ -...-|. .|+|+|||.+++|+||+++++||+||+|+++|.++.+.|||++|.+
T Consensus 440 ~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k~pg~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRigtaEIE~al~~ 519 (626)
T KOG1175|consen 440 GNGELRLKPPWPPGMFRTLWGNHERFRAAYFKKFPGYYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIGTAEIESALVE 519 (626)
T ss_pred ceeEEEEeCCCCccccccccCCHHHhhhhhcccCCceEEecCceEEcCCceEEEEecccccccccceeecHHHHHHHHhh
Confidence 6899999985 67899999988 3333343 8999999999999999999999999999999999999999999999
Q ss_pred CCCceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHH
Q 008342 475 HPLVLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLR 553 (569)
Q Consensus 475 ~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~ 553 (569)
||.|.|++|++.+++..||.+.+||+++++. .+.+.+.++|++.+|+.+.++..|+.|.+++ ||+|.+||+.|+.||
T Consensus 520 hp~VaEsAvVg~p~~~~ge~v~aFvvl~~g~--~~~~~L~kel~~~VR~~igp~a~P~~I~~v~~LPkTrSGKimRr~lr 597 (626)
T KOG1175|consen 520 HPAVAESAVVGSPDPIKGEVVLAFVVLKSGS--HDPEQLTKELVKHVRSVIGPYAVPRLIVFVPGLPKTRSGKIMRRALR 597 (626)
T ss_pred CcchhheeeecCCCCCCCeEEEEEEEEcCCC--CChHHHHHHHHHHHHhhcCcccccceeEecCCCCccccchhHHHHHH
Confidence 9999999999999999999999999999983 3455689999999999999999999999886 999999999999999
Q ss_pred HHHHhc
Q 008342 554 AKAKEM 559 (569)
Q Consensus 554 ~~~~~~ 559 (569)
++....
T Consensus 598 ki~~g~ 603 (626)
T KOG1175|consen 598 KIASGK 603 (626)
T ss_pred HHhccC
Confidence 998876
No 79
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2e-63 Score=527.72 Aligned_cols=511 Identities=24% Similarity=0.319 Sum_probs=411.1
Q ss_pred cccccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCc
Q 008342 16 NYTALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGA 95 (569)
Q Consensus 16 ~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 95 (569)
..++.++.++|.++++++|+++|+++.+..+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 19 ~~~~~~i~~~l~~~a~~~p~~~a~~~~~~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~ 98 (557)
T PRK07059 19 ASQYPSLADLLEESFRQYADRPAFICMGKAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIAAVLRAGY 98 (557)
T ss_pred CCCCCCHHHHHHHHHHHcCCCceEEEcCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCe
Confidence 44457899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCc-chh------------
Q 008342 96 VLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESC-DSK------------ 162 (569)
Q Consensus 96 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~------------ 162 (569)
+++|++|.++.+++.++++.++++++|+++.....+....... ....++....... ...
T Consensus 99 ~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (557)
T PRK07059 99 VVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKT--------AVKHVVVASMGDLLGFKGHIVNFVVRRVK 170 (557)
T ss_pred EEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhccc--------CCceeEEeccccccccccccccccccccc
Confidence 9999999999999999999999999999877655444432211 1222222211100 000
Q ss_pred -hhHHhhhcchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHh----CC---C
Q 008342 163 -QLEYALARGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIW----GM---N 234 (569)
Q Consensus 163 -~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~----~~---~ 234 (569)
............+.+++..............++++++++|||||||.||+|.++|.+++.+.......+ .. .
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~ 250 (557)
T PRK07059 171 KMVPAWSLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRP 250 (557)
T ss_pred ccccccCCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCC
Confidence 000011123344555554433222222335678999999999999999999999999876654333221 11 1
Q ss_pred CCcEEEEcCCccchhhHHH-HHHHHHhcceEEEec-cCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccc
Q 008342 235 EGAVFLWTLPMFHGNGWSY-TWSLAALCGTSICLR-QVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNV 312 (569)
Q Consensus 235 ~~d~~~~~~p~~~~~g~~~-~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l 312 (569)
....+++.+|++|.+++.. .+..+..|++.++.+ ..++..+++.++++++|.+.++|.++..+.......... ++++
T Consensus 251 ~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~-~~~l 329 (557)
T PRK07059 251 DQLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLD-FSKL 329 (557)
T ss_pred CCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCC-chhh
Confidence 2456788899999988754 344556677766664 457889999999999999999999999998876544444 7899
Q ss_pred eeeeecCCCCCHHHHHHhhh-cCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCC
Q 008342 313 VNVNTAGAPPPPSLLFAMSQ-KGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDART 391 (569)
Q Consensus 313 ~~~~~~g~~l~~~~~~~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~ 391 (569)
+.++.||+++++.+.++|.+ +++++++.||+||++.+++.+.... .....++|.|.+++ .++++|++
T Consensus 330 ~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~vG~p~~g~-~v~i~d~~- 397 (557)
T PRK07059 330 IVANGGGMAVQRPVAERWLEMTGCPITEGYGLSETSPVATCNPVDA----------TEFSGTIGLPLPST-EVSIRDDD- 397 (557)
T ss_pred eEEEeccccCCHHHHHHHHHHhCCCeeeccccccccchhhcCCCCC----------CCcCCcccCccCCc-EEEEECCC-
Confidence 99999999999999988875 4999999999999987665443111 11236899999999 69999976
Q ss_pred CcccCCCCCceEEEEEecCcccccccCCcchhhhhh-cCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHH
Q 008342 392 NQPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAF-ANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEK 470 (569)
Q Consensus 392 ~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~ 470 (569)
+++++.| +.|||+++|+.++.||+++++.+...| .+|||+|||+++++++|.+++.||.+|+++++|.+++|.+||.
T Consensus 398 ~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~p~~iE~ 475 (557)
T PRK07059 398 GNDLPLG--EPGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDERGYTKIVDRKKDMILVSGFNVYPNEIEE 475 (557)
T ss_pred CCCCCCC--CceEEEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcCCCcEEEecccccceEECCEEEcHHHHHH
Confidence 8888887 789999999999999999998888777 4799999999999999999999999999999999999999999
Q ss_pred HHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccH
Q 008342 471 VLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQK 549 (569)
Q Consensus 471 ~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r 549 (569)
+|.++++|.+++|++.++...|+.++++++..... . ..+++.+++.+.++.+++|..+.+++ +|+|++||++|
T Consensus 476 ~l~~~~~V~~~~v~~~~~~~~ge~~~~~v~~~~~~-~-----~~~~l~~~~~~~l~~~~~P~~i~~v~~~P~t~~GK~~r 549 (557)
T PRK07059 476 VVASHPGVLEVAAVGVPDEHSGEAVKLFVVKKDPA-L-----TEEDVKAFCKERLTNYKRPKFVEFRTELPKTNVGKILR 549 (557)
T ss_pred HHHhCCceeEEEEEecccCCCCeeEEEEEEeCCCC-C-----CHHHHHHHHHHhcccccCCcEEEEeccCCCCcccceeH
Confidence 99999999999999998888888888888865432 1 34689999999999999999999877 99999999999
Q ss_pred HHHHHH
Q 008342 550 HLLRAK 555 (569)
Q Consensus 550 ~~l~~~ 555 (569)
+.|+++
T Consensus 550 ~~L~~~ 555 (557)
T PRK07059 550 RELRDG 555 (557)
T ss_pred HHHHhh
Confidence 999864
No 80
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=1.7e-63 Score=528.79 Aligned_cols=508 Identities=24% Similarity=0.331 Sum_probs=409.2
Q ss_pred ccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHH-hcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceE
Q 008342 19 ALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALS-KLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVL 97 (569)
Q Consensus 19 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~-~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 97 (569)
..++.++|++++..+|+++|+++.++++||+||.+++.++|+.|. +.|+++||+|+++++|++++++++|||+++|+++
T Consensus 24 ~~~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 103 (560)
T PRK08751 24 FRTVAEVFATSVAKFADRPAYHSFGKTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLRAGLTV 103 (560)
T ss_pred CCcHHHHHHHHHHhCCCCceEEECCceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEE
Confidence 458999999999999999999999999999999999999999997 6899999999999999999999999999999999
Q ss_pred eeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCc---chh-----h------
Q 008342 98 NSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESC---DSK-----Q------ 163 (569)
Q Consensus 98 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~-----~------ 163 (569)
+|++|.++.+++.+++++++++++++++.....+....... ....++.+..... ... .
T Consensus 104 v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (560)
T PRK08751 104 VNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADT--------PVKQVITTGLGDMLGFPKAALVNFVVKYVKK 175 (560)
T ss_pred eccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCC--------CccEEEEechhhhcccccchhhhhhhhhhhc
Confidence 99999999999999999999999999987765554433222 1223333211000 000 0
Q ss_pred -hHHhhhcchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhC----CCCC-c
Q 008342 164 -LEYALARGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWG----MNEG-A 237 (569)
Q Consensus 164 -~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~----~~~~-d 237 (569)
.......+...+.+.+...............+++++++|||||||.||+|.++|.++..........++ +..+ +
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~ 255 (560)
T PRK08751 176 LVPEYRINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCE 255 (560)
T ss_pred cccccCCCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCc
Confidence 000001122334444433222111122346789999999999999999999999999877766555443 3333 5
Q ss_pred EEEEcCCccchhhHHHH-HHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceee
Q 008342 238 VFLWTLPMFHGNGWSYT-WSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNV 315 (569)
Q Consensus 238 ~~~~~~p~~~~~g~~~~-~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~ 315 (569)
++++..|++|.+++... +..+..|++.++. ..+++..+++.++++++|++.++|.++..+.+........ ++++|.+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~-l~~lr~v 334 (560)
T PRK08751 256 VVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQID-FSSLKMT 334 (560)
T ss_pred eEEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcCCcc-hhhheee
Confidence 67788999999987543 4445567777665 4578899999999999999999999999998875444444 7899999
Q ss_pred eecCCCCCHHHHHHhhhc-CCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcc
Q 008342 316 NTAGAPPPPSLLFAMSQK-GFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQP 394 (569)
Q Consensus 316 ~~~g~~l~~~~~~~~~~~-~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~ 394 (569)
++||+++++.+.+.+++. ++++++.||+||+++.++.+.... ....+++|.|.+++ .++++|++ +++
T Consensus 335 ~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~vG~~~~~~-~v~i~d~~-~~~ 402 (560)
T PRK08751 335 LGGGMAVQRSVAERWKQVTGLTLVEAYGLTETSPAACINPLTL----------KEYNGSIGLPIPST-DACIKDDA-GTV 402 (560)
T ss_pred eeCCCCCCHHHHHHHHHHhCCeEEEeeccccCCCceecccccc----------cccCCCcCccCCCc-eEEEECCC-CCC
Confidence 999999999999998854 899999999999987665443110 12236789999999 69999965 888
Q ss_pred cCCCCCceEEEEEecCcccccccCCcchhhhhh-cCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHh
Q 008342 395 VPADGKTIGEIVMRGSCVMKGYLKNPKANEEAF-ANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLY 473 (569)
Q Consensus 395 ~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~ 473 (569)
++.+ +.|||+++|+.++.||+++++.+...| .+|||+|||+|+++++|.+++.||.+|+|+++|.+++|.+||..|.
T Consensus 403 ~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~p~eiE~~l~ 480 (560)
T PRK08751 403 LAIG--EIGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNEIEDVIA 480 (560)
T ss_pred CCCC--CceEEEEecCccchhhcCChhhhhhccccCCCccccceEEEcCCceEEEEeechhheeECCEEEcHHHHHHHHH
Confidence 8877 789999999999999999999888777 4799999999999999999999999999999999999999999999
Q ss_pred cCCCceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHH
Q 008342 474 LHPLVLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLL 552 (569)
Q Consensus 474 ~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l 552 (569)
.++.|.+++|++.++...|+.+.++++.... .. ..+++.++++++++.+++|..+.+++ ||+|++||++|++|
T Consensus 481 ~~~~v~~~~v~~~~~~~~ge~~~~~v~~~~~-~~-----~~~~l~~~~~~~l~~~~~P~~v~~v~~lP~t~~gKv~r~~L 554 (560)
T PRK08751 481 MMPGVLEVAAVGVPDEKSGEIVKVVIVKKDP-AL-----TAEDVKAHARANLTGYKQPRIIEFRKELPKTNVGKILRREL 554 (560)
T ss_pred hCcCeeeeEEEecCCCCCCceEEEEEEcCCC-CC-----CHHHHHHHHHHhhhhccCCeEEEEhhhCCCCccccccHHHH
Confidence 9999999999999988888888777765432 22 45689999999999999999999877 99999999999999
Q ss_pred HHH
Q 008342 553 RAK 555 (569)
Q Consensus 553 ~~~ 555 (569)
++.
T Consensus 555 ~~~ 557 (560)
T PRK08751 555 RDA 557 (560)
T ss_pred HHh
Confidence 876
No 81
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=4.2e-64 Score=577.40 Aligned_cols=515 Identities=20% Similarity=0.265 Sum_probs=416.7
Q ss_pred cccccCHHHHHHHhhhhCCCceeeeeC-CeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcC
Q 008342 16 NYTALTPLWFINRAATLHPTRKSVVYG-SKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAG 94 (569)
Q Consensus 16 ~~~~~~l~~~l~~~a~~~p~~~a~~~~-~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 94 (569)
.....++.++++++++++|+++|+++. ++++||+||.++++++|++|.+ ++++||+|+++++|+++++++++||+++|
T Consensus 611 ~~~~~~l~~~~~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~-~~~~g~~V~i~~~n~~~~~~~~la~~~~G 689 (1146)
T PRK08633 611 KEALPPLAEAWIDTAKRNWSRLAVADSTGGELSYGKALTGALALARLLKR-ELKDEENVGILLPPSVAGALANLALLLAG 689 (1146)
T ss_pred cCCCCCHHHHHHHHHHhcCCCcEEEcCCCCcCcHHHHHHHHHHHHHHHHH-hCCCCCeEEEECCCchHHHHHHHHHHHcC
Confidence 344578999999999999999999874 5899999999999999999987 48999999999999999999999999999
Q ss_pred ceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHH--HHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcch
Q 008342 95 AVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALK--MMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGA 172 (569)
Q Consensus 95 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 172 (569)
++++|+++..+.+++.++++++++++++++++..+.+..... ..+ ....++.+++...... ..
T Consensus 690 ~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~--------~~ 754 (1146)
T PRK08633 690 KVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELP-------ENVKVIYLEDLKAKIS--------KV 754 (1146)
T ss_pred CEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcc-------cCceEEEeehhccccc--------hh
Confidence 999999999999999999999999999998765544331100 011 1234444433211000 00
Q ss_pred hhHHhhhhcCC-CC----CCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccc
Q 008342 173 IEYEKFLETGD-PE----FAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFH 247 (569)
Q Consensus 173 ~~~~~~l~~~~-~~----~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~ 247 (569)
..+.+...... +. ........++++++++|||||||.||+|.+||+++..........++..++|++++.+|++|
T Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h 834 (1146)
T PRK08633 755 DKLTALLAARLLPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNLRNDDVILSSLPFFH 834 (1146)
T ss_pred HHHHHHHHhccCCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCCCCCCEEEEcCcHHH
Confidence 11111111110 00 00012346789999999999999999999999999988888888888999999999999999
Q ss_pred hhhHHH-HHHHHHhcceEEEec-cCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHH
Q 008342 248 GNGWSY-TWSLAALCGTSICLR-QVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPS 325 (569)
Q Consensus 248 ~~g~~~-~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~ 325 (569)
.+|+.. .+.....|+++++.+ .+++..+++.++++++|++.++|++++.+.+........ ++++|.+++||++++++
T Consensus 835 ~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~lr~~~~gg~~~~~~ 913 (1146)
T PRK08633 835 SFGLTVTLWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLM-FASLRLVVAGAEKLKPE 913 (1146)
T ss_pred HHhHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCccc-CCCeeeEEEcCCcCCHH
Confidence 999876 445556677766654 478999999999999999999999999998765444344 78999999999999999
Q ss_pred HHHHhhh-cCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEE
Q 008342 326 LLFAMSQ-KGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGE 404 (569)
Q Consensus 326 ~~~~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Ge 404 (569)
+.+++++ +++++++.||+||++++++.+.......... ........++|.|.+++ +++|+|++++++++.| +.||
T Consensus 914 ~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~-~~~~~~~~~vG~p~~~~-~v~i~d~~~~~~~~~g--~~Ge 989 (1146)
T PRK08633 914 VADAFEEKFGIRILEGYGATETSPVASVNLPDVLAADFK-RQTGSKEGSVGMPLPGV-AVRIVDPETFEELPPG--EDGL 989 (1146)
T ss_pred HHHHHHHHhCCCeecccccccCcceEEEecCcccccccc-cccCCCCCCccccCCCC-EEEEEcCCCCccCCCC--CceE
Confidence 9999985 5999999999999987665443211100000 01112357899999999 6999998889999988 7899
Q ss_pred EEEecCcccccccCCcchhhhhhcC----CeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCC--Cc
Q 008342 405 IVMRGSCVMKGYLKNPKANEEAFAN----GWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHP--LV 478 (569)
Q Consensus 405 l~v~~~~~~~gy~~~~~~~~~~~~~----g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~--~v 478 (569)
|+++|++++.||+++++.+.+.|.+ |||+|||++++++||.+++.||.||+|+++|++|+|.+||++|.+|| .+
T Consensus 990 l~v~g~~~~~gY~~~~~~t~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~~~~ 1069 (1146)
T PRK08633 990 ILIGGPQVMKGYLGDPEKTAEVIKDIDGIGWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVPLGAVEEELAKALGGEE 1069 (1146)
T ss_pred EEEcCCCccccccCCccchHHHhhcCCCCCeEECCCEEEEcCCceEEEEecccchhhhCcEEECHHHHHHHHHhccCCCC
Confidence 9999999999999999999988877 99999999999999999999999999999999999999999999998 46
Q ss_pred eeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHh-cCCCCcCCceEEecc-CCCCCCCcccHHHHHHHH
Q 008342 479 LEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRA-KMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKA 556 (569)
Q Consensus 479 ~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~-~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~ 556 (569)
.+++|++.+++..|+.++++++... . ..+++.+++++ .++.|++|..+++++ ||+|++||++|++|+++.
T Consensus 1070 ~~~~v~~~~~~~~g~~~~~~v~~~~-~-------~~~~l~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~L~~~~ 1141 (1146)
T PRK08633 1070 VVFAVTAVPDEKKGEKLVVLHTCGA-E-------DVEELKRAIKESGLPNLWKPSRYFKVEALPLLGSGKLDLKGLKELA 1141 (1146)
T ss_pred ceEEEEeccCCCCCcEEEEEEecCc-c-------CHHHHHHHHHhcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHH
Confidence 6899999999988999998887621 1 34567777764 699999999998777 999999999999999987
Q ss_pred Hhc
Q 008342 557 KEM 559 (569)
Q Consensus 557 ~~~ 559 (569)
.+.
T Consensus 1142 ~~~ 1144 (1146)
T PRK08633 1142 LAL 1144 (1146)
T ss_pred HHh
Confidence 664
No 82
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=6.6e-63 Score=521.80 Aligned_cols=509 Identities=25% Similarity=0.375 Sum_probs=405.0
Q ss_pred ccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEe
Q 008342 19 ALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLN 98 (569)
Q Consensus 19 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (569)
+.++.++|+++++.+|+++|+.+.++.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 20 ~~~~~~~~~~~~~~~p~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v 99 (541)
T TIGR03205 20 RGTLPDLLSKAAADYGPRPALEFRDRPITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFFGALKAGARVV 99 (541)
T ss_pred CCCHHHHHHHHHHHcCCCceEEECCcEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEEE
Confidence 55899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhh---hHHhhhcchhhH
Q 008342 99 SINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQ---LEYALARGAIEY 175 (569)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~~~ 175 (569)
|++|.++.+++.++++.++++++|+++.. .......+.... . ....++.+......... ...........+
T Consensus 100 ~l~~~~~~~~l~~~i~~~~~~~vi~~~~~-~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (541)
T TIGR03205 100 HLSPLDGERALSHKLSDSGARLLITSDLA-ALLPMALKFLEK---G--LLDRLIVCEDDNWGKVGTPQAPIPADPRIVTY 173 (541)
T ss_pred ecCCCCCHHHHHHHHhhcCceEEEEeCch-hhhHHHHHhhhc---c--cceEEEEecccccccccccccccCCCcccccH
Confidence 99999999999999999999999998642 111111111110 0 12233333321100000 000011223456
Q ss_pred HhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHh------CCCCCcEEEEcCCccchh
Q 008342 176 EKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIW------GMNEGAVFLWTLPMFHGN 249 (569)
Q Consensus 176 ~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~------~~~~~d~~~~~~p~~~~~ 249 (569)
++++......... ....++++++++|||||||.||+|.++|.++....... ..+ .....+++++..|++|.+
T Consensus 174 ~~~~~~~~~~~~~-~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~~~p~~~~~ 251 (541)
T TIGR03205 174 ADFVKGAAAPAEW-PAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIY-DVWGKPSRATRGDVERVICVLPLFHIY 251 (541)
T ss_pred HHHHhcCCCCCCC-CCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHH-HhhcccccccCCCCceEEEeccHHHHH
Confidence 6665433222111 23456789999999999999999999999987654322 221 223457899999999998
Q ss_pred hHHHHHHH-HHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHH
Q 008342 250 GWSYTWSL-AALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLF 328 (569)
Q Consensus 250 g~~~~~~~-~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~ 328 (569)
++...+.. +..|++++....+++..+++.|+++++|++.++|+++..+.+........ +++++.+++||+++++++.+
T Consensus 252 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~l~~i~~gg~~~~~~~~~ 330 (541)
T TIGR03205 252 ALTVILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRD-LSSLATIGSGGAPLPVEVAN 330 (541)
T ss_pred HHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccC-ccccceEEEccccCCHHHHH
Confidence 88665544 44566665556789999999999999999999999999988754322233 78899999999999999998
Q ss_pred Hhhh-cCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeee-CCCCcccCCCCCceEEEE
Q 008342 329 AMSQ-KGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVID-ARTNQPVPADGKTIGEIV 406 (569)
Q Consensus 329 ~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d-~~~~~~~~~~~~~~Gel~ 406 (569)
++.+ .+.++++.||+||++..++.+.... .....++|.|.+++ .+++.+ ++++++++.+ +.|||+
T Consensus 331 ~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~----------~~~~~~~G~~~~~~-~~~v~~~d~~~~~~~~g--~~Gel~ 397 (541)
T TIGR03205 331 FFERKTGLKLKSGWGMTETCSPGTGHPPEG----------PDKPGSIGLMLPGI-ELDVVSLDDPTKVLPPG--EVGELR 397 (541)
T ss_pred HHHHHhCCCeecccccccCCcccccCCCCC----------CCCCCCcceeccCc-eeEEEecCCCCccCCCC--CeeEEE
Confidence 8875 4899999999999987666543211 11236789999998 587764 3457788877 789999
Q ss_pred EecCcccccccCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEee
Q 008342 407 MRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVAR 486 (569)
Q Consensus 407 v~~~~~~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~ 486 (569)
++|++++.||++++..+.+.|.++||+|||+++++++|++++.||.||+|+.+|.+++|.+||.++.+++.|.+++|++.
T Consensus 398 v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~ 477 (541)
T TIGR03205 398 IRGPNVTRGYWNRPEESAEAFVGDRFLTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQMIEQAIYEHPGVQEVIVIGI 477 (541)
T ss_pred EecCCccccccCChhhhHhhhccCCcccCceEEEcCCceEEEEccccCeEEECCEEECHHHHHHHHHhCCCeeeEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHH
Q 008342 487 PDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLR 553 (569)
Q Consensus 487 ~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~ 553 (569)
+++..++.+++++++.++.... ..+++.++++++|+.|++|..+.+++ ||+|++||++|++|+
T Consensus 478 ~~~~~~~~~~~~v~~~~~~~~~----~~~~l~~~~~~~l~~~~~P~~i~~~~~iP~t~~gK~~r~~l~ 541 (541)
T TIGR03205 478 PDQYRGEAAKAFVKLRPGAKPF----SLDELRAFLAGKLGKHELPVAVEFVDELPRTPVGKLSRHELR 541 (541)
T ss_pred CCcccCceEEEEEEECCCCCcC----CHHHHHHHHHhhcccccCCcEEEEeccCCCCcccceeHhhcC
Confidence 9888888899999887653211 35789999999999999999999877 999999999999874
No 83
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=2.1e-63 Score=521.79 Aligned_cols=490 Identities=22% Similarity=0.284 Sum_probs=405.7
Q ss_pred CHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeec
Q 008342 21 TPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSI 100 (569)
Q Consensus 21 ~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 100 (569)
++.+.|.+.+..+|+++|+...++++||+||.+++.++|+.|.+.|+++|++|+++++|+.++++++|||+++|++++|+
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~~ 80 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRYQGQELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSGHAYIPV 80 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEcCCcEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCEEeCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHhhhh
Q 008342 101 NIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEKFLE 180 (569)
Q Consensus 101 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 180 (569)
++.++.+++.++++..+++.++++.+...... ...++.+.. ...+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~---------------~~~~~~~~~------------------~~~~~~ 127 (502)
T TIGR01734 81 DTSIPSERIEMIIEAAGPELVIHTAELSIDAV---------------GTQIITLSA------------------LEQAET 127 (502)
T ss_pred CCcChHHHHHHHHHhcCCCEEEeccccccccc---------------CCceEEchH------------------hhhhhh
Confidence 99999999999999999999999876432211 011222211 011111
Q ss_pred cCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHHHHHHHh
Q 008342 181 TGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTWSLAAL 260 (569)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~ 260 (569)
...+ ........++++++++|||||||.||+|.++|+++.....+....++...+++++...|++|..++...+.++..
T Consensus 128 ~~~~-~~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~ 206 (502)
T TIGR01734 128 SGGP-VSFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFPLSEGKQFLNQAPFSFDLSVMDLYPCLAS 206 (502)
T ss_pred hcCC-ccccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCCCCCCceEEeecCceechhHHHHHHHHHC
Confidence 1111 111123467789999999999999999999999999888887778889999999999999999999888888888
Q ss_pred cceEEEecc---CChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhhc--CC
Q 008342 261 CGTSICLRQ---VTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQK--GF 335 (569)
Q Consensus 261 g~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~--~~ 335 (569)
|+++++.+. .++..+++.+++++++.+.++|.+++.++......... +++++.++++|+++++++.+++.+. ++
T Consensus 207 G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~-~~~l~~~~~~G~~~~~~~~~~~~~~~~~~ 285 (502)
T TIGR01734 207 GGTLHCLDKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNFNQEN-YPHLTHFLFCGEELPVKTAKALLERFPKA 285 (502)
T ss_pred CCEEEEcCHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhcccccccc-CCcccEEEEcCCcCCHHHHHHHHHHCCCc
Confidence 998888754 57899999999999999999999998877654333333 7899999999999999999998854 89
Q ss_pred eEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCccccc
Q 008342 336 RITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKG 415 (569)
Q Consensus 336 ~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~g 415 (569)
++++.||+||+++.++......+. .......++|.+.+++ +++|+|++ +++++.+ +.|||+++|+.++.|
T Consensus 286 ~~~~~yG~tE~~~~~~~~~~~~~~------~~~~~~~~vg~~~~~~-~~~i~~~~-~~~~~~g--~~Gel~v~g~~~~~g 355 (502)
T TIGR01734 286 TIYNTYGPTEATVAVTSVKITQEI------LDQYPRLPIGFAKPDM-NLFIMDEE-GEPLPEG--EKGEIVIVGPSVSKG 355 (502)
T ss_pred EEEeCccCCcceEEEEEEEccccc------cccCCccccccccCCC-EEEEECCC-CCCCCCC--CeeEEEEcccccccc
Confidence 999999999997544432211110 0111235689999999 69999987 8888877 799999999999999
Q ss_pred ccCCcchhhhhhc----CCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeec-CCC
Q 008342 416 YLKNPKANEEAFA----NGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARP-DER 490 (569)
Q Consensus 416 y~~~~~~~~~~~~----~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~-~~~ 490 (569)
|+++++.+...|. .+||+|||+|+++++ ++++.||.+|+|+++|++|+|.+||+.|.++|.|.++++++.. ...
T Consensus 356 y~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~~-~l~i~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~ 434 (502)
T TIGR01734 356 YLNNPEKTAEAFFSHEGQPAYRTGDAGTITDG-QLFYQGRLDFQIKLHGYRIELEDIEFNLRQSSYIESAVVVPKYNKDH 434 (502)
T ss_pred ccCCcccchHhheeCCCcEEEECCCEEEEECC-EEEEeccccCeEEECcEEeCHHHHHHHHHcCCCccEEEEEEEEcCCC
Confidence 9999988887763 359999999999966 9999999999999999999999999999999999999999865 444
Q ss_pred CCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHH
Q 008342 491 WGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAK 557 (569)
Q Consensus 491 ~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~ 557 (569)
.++.++++++....... +.....+++.+.++++++.+.+|..+++++ ||+|++||++|++|++++.
T Consensus 435 ~~~~~~~~v~~~~~~~~-~~~~~~~~i~~~~~~~l~~~~~P~~~~~v~~lP~t~~gKv~r~~l~~~~~ 501 (502)
T TIGR01734 435 KVEYLIAAIVPETEDFE-KEFQLTKAIKKELKKSLPAYMIPRKFIYRDQLPLTANGKIDRKALAEEVN 501 (502)
T ss_pred CceEEEEEEEecccccc-cchhhHHHHHHHHhhhChhhcCCcEEEEccccCCCCCCcccHHHHHHhhc
Confidence 56778888887764322 111244789999999999999999999887 9999999999999998764
No 84
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=6.8e-65 Score=627.57 Aligned_cols=488 Identities=20% Similarity=0.269 Sum_probs=416.0
Q ss_pred ccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEe
Q 008342 19 ALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLN 98 (569)
Q Consensus 19 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (569)
..++.++|+++++++|+++|+++.++++||+||+++++++|+.|.+.|+++|++|++++++++++++++|||+++|++++
T Consensus 3094 ~~~~~~l~~~~a~~~p~~~Av~~~~~~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~vv~~lavl~aGa~~v 3173 (3956)
T PRK12467 3094 ERLVHQLIEAQVARTPEAPALVFGDQQLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVERSVEMIVALLAVLKAGGAYV 3173 (3956)
T ss_pred cccHHHHHHHHHHhCCCcceEeeCCcccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeCCCHHHHHHHHHHHhhCcEee
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHhh
Q 008342 99 SINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEKF 178 (569)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (569)
|++|.++.+++.+++++++++++|++......+... ....++.++....
T Consensus 3174 pld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~------------~~~~~~~~~~~~~------------------- 3222 (3956)
T PRK12467 3174 PLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAP------------AGDTALTLDRLDL------------------- 3222 (3956)
T ss_pred cCCCCChHHHHHHHHhCCCCcEEEechhhhhhcccc------------cCCceeeecchhh-------------------
Confidence 999999999999999999999999987653322110 1122233322110
Q ss_pred hhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHHHHHH
Q 008342 179 LETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTWSLA 258 (569)
Q Consensus 179 l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~ 258 (569)
.............++++++|+|||||||.||||+++|+++.+........++++++|+++...|++|..+....+.++
T Consensus 3223 --~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~L 3300 (3956)
T PRK12467 3223 --NGYSENNPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAYELDANDRVLLFMSFSFDGAQERFLWTL 3300 (3956)
T ss_pred --cccCCCCCcccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhcCCCcCCEEEEecCccHhHHHHHHHHHH
Confidence 001111112235678999999999999999999999999999999888899999999999999999999988888888
Q ss_pred HhcceEEEecc--CChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhhc--C
Q 008342 259 ALCGTSICLRQ--VTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQK--G 334 (569)
Q Consensus 259 ~~g~~~~~~~~--~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~--~ 334 (569)
+.|+++++.+. +++..+++.|+++++|++.++|+++..+.+..... . ++++|.+++|||++++++.++|.+. +
T Consensus 3301 ~~G~~l~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~--~-~~~lr~~~~gGe~~~~~~~~~~~~~~~~ 3377 (3956)
T PRK12467 3301 ICGGCLVVRDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDAGGA--D-CASLDIYVFGGEAVPPAAFEQVKRKLKP 3377 (3956)
T ss_pred hCCCEEEECCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhccccc--C-CCCceEEEEecCCCCHHHHHHHHHhCCC
Confidence 99998888765 78999999999999999999999999997653221 2 7889999999999999999999854 7
Q ss_pred CeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccc
Q 008342 335 FRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMK 414 (569)
Q Consensus 335 ~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~ 414 (569)
+++++.||+||++..++......+ ........++|.|++++ ++.|+|++ ++++|.| +.|||+|+|+.+++
T Consensus 3378 ~~l~n~YG~TE~~~~~~~~~~~~~------~~~~~~~~~iG~p~~~~-~~~v~d~~-~~~vp~G--~~GEL~i~G~~v~~ 3447 (3956)
T PRK12467 3378 RGLTNGYGPTEAVVTVTLWKCGGD------AVCEAPYAPIGRPVAGR-SIYVLDGQ-LNPVPVG--VAGELYIGGVGLAR 3447 (3956)
T ss_pred CEEEeCcccchhEeeeEEEecccc------cccCCCCCCCccccCCC-EEEEECCC-CCCCCCC--CCceEEEcchhhhh
Confidence 889999999999876654432111 01112236799999999 69999976 8999988 89999999999999
Q ss_pred cccCCcchhhhhhc--------CCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEee
Q 008342 415 GYLKNPKANEEAFA--------NGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVAR 486 (569)
Q Consensus 415 gy~~~~~~~~~~~~--------~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~ 486 (569)
||+++++.+.++|. .+||+|||+|++++||.++++||.||+||++|++|.+.|||++|.++|+|.+++|++.
T Consensus 3448 GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rIe~~EIE~~l~~~p~V~~a~v~~~ 3527 (3956)
T PRK12467 3448 GYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLLQHPSVREAVVLAR 3527 (3956)
T ss_pred hccCCcccchhhccCCCCCCCCceeeccchhheecCCCcEEEeccccceEeeceEeecHHHHHHHHhhCcccceEEEEEe
Confidence 99999999999984 2479999999999999999999999999999999999999999999999999999987
Q ss_pred cCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHh
Q 008342 487 PDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKE 558 (569)
Q Consensus 487 ~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~ 558 (569)
+. ..++.+++|++....... ..++++++++++||.|++|..+++.+ ||+|++||++|++|++....
T Consensus 3528 ~~-~~~~~lva~v~~~~~~~~-----~~~~l~~~l~~~Lp~y~vP~~~~~l~~lP~t~~GKidR~~L~~~~~~ 3594 (3956)
T PRK12467 3528 DG-AGGKQLVAYVVPADPQGD-----WRETLRDHLAASLPDYMVPAQLLVLAAMPLGPNGKVDRKALPDPDAK 3594 (3956)
T ss_pred cC-CCCcEEEEEEeCCCCCcc-----cHHHHHHHHhccCChhhCCCeeeeeccCCCCCCCccchhhcCCCCcc
Confidence 54 357889999987765333 56789999999999999999998777 99999999999999876543
No 85
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=5.7e-63 Score=518.70 Aligned_cols=496 Identities=24% Similarity=0.335 Sum_probs=410.0
Q ss_pred HHHHHHHh-hhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeec
Q 008342 22 PLWFINRA-ATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSI 100 (569)
Q Consensus 22 l~~~l~~~-a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 100 (569)
..++++++ ++.+|+++|++..+..+||.||.++++++|++|.+.|+++|++|+++++|+++++++++||+++|++++|+
T Consensus 6 ~~~~~~~~~~~~~p~~~a~~~~~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~a~~~~G~~~v~l 85 (508)
T TIGR02262 6 AEDLLDRNVVEGRGGKTAFIDDISSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLGAIRAGIVPVAL 85 (508)
T ss_pred HHHHHHHHHhcccCCceEEEeCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeec
Confidence 34667776 67799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHhhhh
Q 008342 101 NIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEKFLE 180 (569)
Q Consensus 101 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 180 (569)
++.++.+++.++++.++++++|++++..+.+.+.....+ ...+++.++.... ....+.++..
T Consensus 86 ~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~-----------~~~~~~~~~~ 147 (508)
T TIGR02262 86 NTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSP-------HLEHRVVVGRPEA-----------GEVQLAELLA 147 (508)
T ss_pred cCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCC-------CccEEEEeCCCCc-----------ccccHHHHhh
Confidence 999999999999999999999999887666555443333 3344444443211 1123344433
Q ss_pred cCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHH-hHhHhCCCCCcEEEEcCCccchhhHHHHHHH-H
Q 008342 181 TGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLN-GALIWGMNEGAVFLWTLPMFHGNGWSYTWSL-A 258 (569)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~-~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~-~ 258 (569)
....... .....++++++++|||||||.||+|.++|+++...... ....++++++|+++..+|++|.+++...+.. +
T Consensus 148 ~~~~~~~-~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l 226 (508)
T TIGR02262 148 TESEQFK-PAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAAKLFFAYGLGNALTFPM 226 (508)
T ss_pred cCCCccC-CCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHH
Confidence 2222211 12345688999999999999999999999999877655 3456788999999999999999998655544 4
Q ss_pred HhcceEEEec-cCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhh-cCCe
Q 008342 259 ALCGTSICLR-QVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQ-KGFR 336 (569)
Q Consensus 259 ~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~-~~~~ 336 (569)
..|++.++.+ .+++..+++.|+++++|.+.++|.++..+.+........ ..++|.++++|+++++++.+.|.+ ++++
T Consensus 227 ~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~-~~~l~~~~~~G~~l~~~~~~~~~~~~~~~ 305 (508)
T TIGR02262 227 SVGATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAED-QVRLRLCTSAGEALPAEVGQRWQARFGVD 305 (508)
T ss_pred HcCceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCccccccc-cccceeEEEcCCCCCHHHHHHHHHHhCCc
Confidence 5566666654 368999999999999999999999998887654332223 678999999999999999999885 5999
Q ss_pred EecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccccc
Q 008342 337 ITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGY 416 (569)
Q Consensus 337 i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy 416 (569)
+++.||+||++++++.+... ....+++|.|.+++ .++++|+ ++.+++.+ +.|||+++|++++.||
T Consensus 306 v~~~YG~tE~~~~~~~~~~~-----------~~~~~~~G~~~~g~-~v~i~d~-~~~~~~~g--~~Gel~i~~~~~~~gY 370 (508)
T TIGR02262 306 IVDGIGSTEMLHIFLSNLPG-----------DVRYGTSGKPVPGY-RLRLVGD-GGQDVAAG--EPGELLISGPSSATMY 370 (508)
T ss_pred hhhCccccccCceeecCCcc-----------CCCCCCcCCCCCCc-EEEEECC-CCCCCCCC--CeeEEEEecCcccccc
Confidence 99999999998765543211 01236789999998 6999994 58889887 7999999999999999
Q ss_pred cCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCCCCceee
Q 008342 417 LKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGESPC 496 (569)
Q Consensus 417 ~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~ 496 (569)
+++++.+...|.++||+|||+++++++|.+++.||.+|+|+.+|.+++|.+||+.|.++++|.++++++.++...++.+.
T Consensus 371 ~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~gR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~ 450 (508)
T TIGR02262 371 WNNRAKTRDTFQGEWTRSGDKYVRNDDGSYTYAGRTDDMLKVSGIYVSPFEIESALIQHPAVLEAAVVGVEDEDGLIKPK 450 (508)
T ss_pred CCCHHHhHhhhhcCceeccceEEEcCCccEEEeccccceeeeCCEEECHHHHHHHHHhCCCeeEEEEEeccccCCCceeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988877778888
Q ss_pred EEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHH
Q 008342 497 AFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRA 554 (569)
Q Consensus 497 ~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~ 554 (569)
+++++.+.... .+...+++.+.++++|+.+++|..+.+++ ||+|++||++|+.|++
T Consensus 451 ~~v~~~~~~~~--~~~~~~~i~~~~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~~l~~ 507 (508)
T TIGR02262 451 AFIVLRPGQDI--DTALETELKEHVKDRLAPYKYPRWIVFVDDLPKTATGKIQRFKLRE 507 (508)
T ss_pred EEEEeCCCCcc--ccccHHHHHHHHHHhcccCCCCceEEEecCCCCCCCCcEehhhccC
Confidence 88887765432 12256789999999999999999988666 9999999999999875
No 86
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=9.9e-64 Score=579.73 Aligned_cols=492 Identities=19% Similarity=0.207 Sum_probs=408.0
Q ss_pred cccccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCc
Q 008342 16 NYTALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGA 95 (569)
Q Consensus 16 ~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 95 (569)
..+..++.++|+++++.+|+++|+++.++++||+||.++++++|+.|.+.|+++|++|++++++++++++++|||+++|+
T Consensus 454 ~~~~~~l~~~~~~~~~~~p~~~Al~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i~~~la~~~~G~ 533 (1296)
T PRK10252 454 EIPETTLSALVAQQAAKTPDAPALADARYQFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEAGA 533 (1296)
T ss_pred CCCcCCHHHHHHHHHHhCCCCeEEEcCCCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCC
Confidence 34457899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhH
Q 008342 96 VLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEY 175 (569)
Q Consensus 96 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 175 (569)
+++|++|.++.+++.++++++++++++++.+....+... + ...+..+..
T Consensus 534 ~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~----~--------~~~~~~~~~------------------- 582 (1296)
T PRK10252 534 AWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADV----P--------DLTSLCYNA------------------- 582 (1296)
T ss_pred EEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccC----C--------Cceeeeccc-------------------
Confidence 999999999999999999999999999987654322110 0 001111110
Q ss_pred HhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHHH
Q 008342 176 EKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTW 255 (569)
Q Consensus 176 ~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~ 255 (569)
....... .......++++++|+|||||||.||||+++|+++.+...+....+++.++|++++..|++|..++...+
T Consensus 583 --~~~~~~~--~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~ 658 (1296)
T PRK10252 583 --PLAPQGA--APLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTADDVVLQKTPCSFDVSVWEFF 658 (1296)
T ss_pred --ccccccC--CCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEeCCcchhhhHHHHH
Confidence 0000000 011123567899999999999999999999999999999888899999999999999999999988888
Q ss_pred HHHHhcceEEEec---cCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCC-CCCcccceeeeecCCCCCHHHHHHhh
Q 008342 256 SLAALCGTSICLR---QVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDT-ILPLTNVVNVNTAGAPPPPSLLFAMS 331 (569)
Q Consensus 256 ~~~~~g~~~~~~~---~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~-~~~l~~l~~~~~~g~~l~~~~~~~~~ 331 (569)
.++..|+++++.+ ..++..+++.++++++|++.++|+++..+++...... ...++++|.+++||+++++++.+++.
T Consensus 659 ~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~ 738 (1296)
T PRK10252 659 WPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGEALPADLCREWQ 738 (1296)
T ss_pred HHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecCCCCHHHHHHHH
Confidence 8888888888764 3688999999999999999999999998887643322 11267899999999999999999998
Q ss_pred hc-CCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecC
Q 008342 332 QK-GFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGS 410 (569)
Q Consensus 332 ~~-~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~ 410 (569)
+. ++++++.||+||++..++.+...... .........++|.|++++ ++.|+|+. ++++|.| +.|||+++|+
T Consensus 739 ~~~~~~l~n~YG~TE~~~~~~~~~~~~~~----~~~~~~~~~~iG~p~~~~-~~~i~d~~-~~~~~~g--~~Gel~i~g~ 810 (1296)
T PRK10252 739 QLTGAPLHNLYGPTEAAVDVSWYPAFGEE----LAAVRGSSVPIGYPVWNT-GLRILDAR-MRPVPPG--VAGDLYLTGI 810 (1296)
T ss_pred hcCCCEEEeCCCcchhhheeeeeeccccc----ccccCCCCCCcccccCCC-EEEEECCC-CCCCCCC--CceEEEeccc
Confidence 65 89999999999998766554322110 000112236789999999 69999975 8999988 8999999999
Q ss_pred cccccccCCcchhhhhhc-------CCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEE
Q 008342 411 CVMKGYLKNPKANEEAFA-------NGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAV 483 (569)
Q Consensus 411 ~~~~gy~~~~~~~~~~~~-------~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v 483 (569)
.++.||+++++.+..+|. ++||+|||+|++++||.++++||.||+||++|.+|++.+||++|.++|.|.++.|
T Consensus 811 ~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~l~~~GR~d~~ik~~G~ri~~~eIE~~l~~~~~v~~a~v 890 (1296)
T PRK10252 811 QLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDDGAVEYLGRSDDQLKIRGQRIELGEIDRAMQALPDVEQAVT 890 (1296)
T ss_pred ccchhhCCCcccchhhcccCCCCCCCEEEecCceEEEcCCCcEEEecccCCeEEEeeEEecHHHHHHHHHhCccccceEE
Confidence 999999999999998883 3499999999999999999999999999999999999999999999999999987
Q ss_pred Eeec----CCCCC--ceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHH
Q 008342 484 VARP----DERWG--ESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAK 555 (569)
Q Consensus 484 ~~~~----~~~~g--~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~ 555 (569)
+... +...| ..++++++...+... ..++|+++++++||.|++|..+.+++ ||+|++||++|++|++.
T Consensus 891 ~~~~~~~~~~~~~~~~~lva~v~~~~~~~~-----~~~~l~~~l~~~Lp~~~~P~~~~~~~~lP~t~~GKidr~~L~~~ 964 (1296)
T PRK10252 891 HACVINQAAATGGDARQLVGYLVSQSGLPL-----DTSALQAQLRERLPPHMVPVVLLQLDQLPLSANGKLDRKALPLP 964 (1296)
T ss_pred EEEeccccccCCCCccEEEEEEEcCCCCCC-----CHHHHHHHHHhhCchhcCCcEEEEecCCCCCCCcChhHHhcCCC
Confidence 6542 11112 368888887765432 45789999999999999999998776 99999999999999753
No 87
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=1e-63 Score=507.09 Aligned_cols=503 Identities=26% Similarity=0.321 Sum_probs=386.7
Q ss_pred cccCHHHHHHHhhhhCCCceeeeeCC----eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhc
Q 008342 18 TALTPLWFINRAATLHPTRKSVVYGS----KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMA 93 (569)
Q Consensus 18 ~~~~l~~~l~~~a~~~p~~~a~~~~~----~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~ 93 (569)
...++..++.+.++.+|+.+++.+.. ..+||+|+.+++.++|.+|+..|+..||+|+|++.|+++|+++.+||+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~a~~~~ 93 (613)
T COG1022 14 EIHTLPKRLAERVKDRPDGVALMYKELGGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADLAILAL 93 (613)
T ss_pred hcccHHHHHHHHhhcCCcceeEeeecCCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHHc
Confidence 35689999999999999999988654 88999999999999999999999977999999999999999999999999
Q ss_pred CceEeeccccCCHHHHHHHHhcCCceEEEEcccchH-HHHHHHHHHhhhcCCCCCcCeEEEecC----CCc-chhhhHHh
Q 008342 94 GAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFS-LAEEALKMMEANSEGKLKTPHLIVIGD----ESC-DSKQLEYA 167 (569)
Q Consensus 94 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~----~~~-~~~~~~~~ 167 (569)
|++.||+.++.+++++.++|+++.++++|+++.... .+......++ .....+...+ ... ....++..
T Consensus 94 g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (613)
T COG1022 94 GAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCP-------KVVDLIVIIDLVREAVEAKALVLEVF 166 (613)
T ss_pred CCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhcccc-------chhhhhhhhhhhhhccchhhcccccc
Confidence 999999999999999999999999999999985433 3332222111 0000000000 000 00000000
Q ss_pred hhcchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhC-CCCCcEEEEcCCcc
Q 008342 168 LARGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWG-MNEGAVFLWTLPMF 246 (569)
Q Consensus 168 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~-~~~~d~~~~~~p~~ 246 (569)
...+...+ . .... .......+..++|.|.|+|||||||.||||++||+|+++++........ .+++|++++.+|+.
T Consensus 167 ~~~~~~~~-~-~~~~-~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~LsfLPla 243 (613)
T COG1022 167 PDEGISLF-L-IDSA-GLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLSFLPLA 243 (613)
T ss_pred ccccchhh-h-hccc-ccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEEeCcHH
Confidence 01111111 1 1111 1111124578899999999999999999999999999999999999997 99999999999999
Q ss_pred chhhHHHHHHHHHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCC----C------------------
Q 008342 247 HGNGWSYTWSLAALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPE----D------------------ 304 (569)
Q Consensus 247 ~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~----~------------------ 304 (569)
|++...+.....+.++ ..+....++..+++.+++++||+++++|.+|+.+.+.... .
T Consensus 244 Hi~Er~~~~~~~~~~g-~~~~~~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~ 322 (613)
T COG1022 244 HIFERAFEGGLALYGG-VTVLFKEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKK 322 (613)
T ss_pred HHHHHHHHHHHHhhcc-eEEEecCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHH
Confidence 9999987544444443 4444456889999999999999999999999887654110 0
Q ss_pred -------------------------CCCCcccceeeeecCCCCCHHHHHHhhhcCCeEecccccccCCCCccccccCCCC
Q 008342 305 -------------------------TILPLTNVVNVNTAGAPPPPSLLFAMSQKGFRITHTYGLTELTGPASVCAWKPEW 359 (569)
Q Consensus 305 -------------------------~~~~l~~l~~~~~~g~~l~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~ 359 (569)
....-.++|.+++||+++++++...++..|++++++||+||+++.++++.+.
T Consensus 323 ~~~~~~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~lGi~i~eGYGlTEts~~~~v~~~~--- 399 (613)
T COG1022 323 ISRALLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSLGIPILEGYGLTETSAVVSVNPPD--- 399 (613)
T ss_pred HHhhhcccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHcCCCeEEEecccccccceEEcccc---
Confidence 0010237899999999999999999999999999999999999988887532
Q ss_pred CCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccccccCCcchhhhhhc-CCeeecCcee
Q 008342 360 DSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAFA-NGWFHSGDLA 438 (569)
Q Consensus 360 ~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~tGD~~ 438 (569)
....+++|.|+|++ +++|.| .|||+|+||++|.|||++|+.|.+.|. |||++|||+|
T Consensus 400 --------~~~~gtvG~p~p~~-evKI~d-------------~GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg 457 (613)
T COG1022 400 --------RFVLGTVGKPLPGI-EVKIAD-------------DGEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLG 457 (613)
T ss_pred --------CcccCCcCCcCCCc-eEEEcc-------------CceEEEecchhcchhcCChHHHhhhccccCCcccCcee
Confidence 23448999999999 699998 299999999999999999999999997 9999999999
Q ss_pred EEcCCCeEEEecccCceEE-eCceeechHHHHHHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcchh---------
Q 008342 439 VKHPDNYIEIKDRLKDVII-SGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADEL--------- 508 (569)
Q Consensus 439 ~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~--------- 508 (569)
.++++|+|+++||.+|+|+ .+|++|.|+.||..+.++|.|.+.+|++..++ .+.++|++..+.-..
T Consensus 458 ~~d~~g~L~i~gRkK~~i~l~~GknIaP~~IE~~l~~~~~I~qi~vvg~~k~----~~~AlIvp~~~~l~~~a~~~~~~~ 533 (613)
T COG1022 458 ELDEDGYLVITGRKKELIKLSNGKNIAPEPIESKLAKSPLIEQICVVGDDKK----FLVALIVPDFDALEKWAESLNKVI 533 (613)
T ss_pred EEcCCCcEEEeecccceEECCCCcccChHHHHHHHhcCCCeeEEEEEecCCc----ceEEEEeCCHHHHHHHHHhccccc
Confidence 9999999999999999999 89999999999999999999999999994444 388888877653220
Q ss_pred --hh------hhHHHHHHHHHHh---cCCCCcCCceEEecc--CC-----CCCCCcccHHHHHHHHHhcC
Q 008342 509 --DK------GKLAEDVSKFCRA---KMPSYWVPKSVVFAA--LP-----KSATGKIQKHLLRAKAKEMG 560 (569)
Q Consensus 509 --~~------~~~~~~l~~~~~~---~l~~~~~p~~i~~~~--lP-----~t~~GKi~r~~l~~~~~~~~ 560 (569)
+. ....+.+...+.. ....+..+..+.+.. +. .|++=|++|+.+.+.+.+..
T Consensus 534 ~~~~~~l~~~~~l~~~~~~~i~~~~~~~~~~E~i~~~~~~~~~~t~~~~~~t~t~klkR~~i~~~~~~~i 603 (613)
T COG1022 534 SASREELARDPKLLKLILPRVNKGNKRLFGFEQIKKFVLLPKEFTPENGELTPTLKLKRHVILDRYKDEI 603 (613)
T ss_pred cCCHHHHhhCHHHHHHHHHHHHHHhhcccchhhhheeeecccccccccCccccchhhhHHHHHHhhhhHH
Confidence 00 0111222222222 234445555555432 33 68999999999988877543
No 88
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.2e-62 Score=517.23 Aligned_cols=503 Identities=27% Similarity=0.367 Sum_probs=406.7
Q ss_pred ccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEe
Q 008342 19 ALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLN 98 (569)
Q Consensus 19 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (569)
++|+.++++++++++|+++|+.+.++.+||.||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|++++
T Consensus 2 ~~~l~~~~~~~a~~~p~~~a~~~~~~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G~~~v 81 (533)
T PRK07798 2 AWNIADLFEAVADAVPDRVALVCGDRRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKARAVPV 81 (533)
T ss_pred cccHHHHHHHHHHhCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCeEEE
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHhh
Q 008342 99 SINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEKF 178 (569)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (569)
++++.++.+++.++++++++++++++......+.+.....+ ....++.+++..... ...+.++++++
T Consensus 82 ~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~------~~~~~~~~~~~ 148 (533)
T PRK07798 82 NVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLP-------KLRTLVVVEDGSGND------LLPGAVDYEDA 148 (533)
T ss_pred ecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCC-------CccEEEEecCCcccc------cCCccccHHHH
Confidence 99999999999999999999999999876655554432222 344566665432111 11134567776
Q ss_pred hhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhH---------hCC------CCCcEEEEcC
Q 008342 179 LETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALI---------WGM------NEGAVFLWTL 243 (569)
Q Consensus 179 l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~---------~~~------~~~d~~~~~~ 243 (569)
+......... . ....+.++++|||||||.||+|+++|.++.......... +.+ ..+++++...
T Consensus 149 ~~~~~~~~~~-~-~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (533)
T PRK07798 149 LAAGSPERDF-G-ERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAP 226 (533)
T ss_pred HhccCCcCCC-C-CCCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEec
Confidence 6553322111 1 223345789999999999999999999987654432211 112 5678999999
Q ss_pred CccchhhHHHHHHHHHhcceEEEec--cCChHHHHHHHHhcCccEEeehHHHHH-HHHccCC-CCCCCCcccceeeeecC
Q 008342 244 PMFHGNGWSYTWSLAALCGTSICLR--QVTAKAVYTAIATHGVTHFCAAPVVLN-AIANASP-EDTILPLTNVVNVNTAG 319 (569)
Q Consensus 244 p~~~~~g~~~~~~~~~~g~~~~~~~--~~~~~~~~~~i~~~~~t~l~~~P~~~~-~l~~~~~-~~~~~~l~~l~~~~~~g 319 (569)
|++|..++...+.++..|+++++.+ .+++..+++.++++++|.+.++|..+. .+..... ..... +++++.+++||
T Consensus 227 pl~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~-~~~l~~i~~gG 305 (533)
T PRK07798 227 PLMHGAGQWAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYD-LSSLFAIASGG 305 (533)
T ss_pred chhhhhhHHHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCC-CCceEEEEECC
Confidence 9999999998888888899888887 789999999999999999999987654 3333322 22223 78999999999
Q ss_pred CCCCHHHHHHhhh-c-CCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCC--ceeeccCCceeeeCCCCccc
Q 008342 320 APPPPSLLFAMSQ-K-GFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQG--VRTICLDGLDVIDARTNQPV 395 (569)
Q Consensus 320 ~~l~~~~~~~~~~-~-~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G--~~~~~~~~~~i~d~~~~~~~ 395 (569)
+++++++.+++.+ + +..+++.||+||++.+........ ....| .+.++. .++++|++ ++++
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~-------------~~~~g~~~~~~~~-~~~i~~~~-~~~~ 370 (533)
T PRK07798 306 ALFSPSVKEALLELLPNVVLTDSIGSSETGFGGSGTVAKG-------------AVHTGGPRFTIGP-RTVVLDED-GNPV 370 (533)
T ss_pred CCCCHHHHHHHHHHcCCCeEEeeecccccccccccCCCCC-------------CccCCCCccCCCc-eEEEECCC-CCCC
Confidence 9999999999985 4 789999999999975544331110 01222 566677 69999987 7788
Q ss_pred CCCCCceEEEEEecCcccccccCCcchhhhhhc----CCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHH
Q 008342 396 PADGKTIGEIVMRGSCVMKGYLKNPKANEEAFA----NGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKV 471 (569)
Q Consensus 396 ~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~----~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~ 471 (569)
+.|....|+++. ++.++.||++++..+...|. .+||+|||+++++++|.+++.||.||+++.+|.+|+|.+||.+
T Consensus 371 ~~g~~~~g~l~~-~~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~eIE~~ 449 (533)
T PRK07798 371 EPGSGEIGWIAR-RGHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFPEEVEEA 449 (533)
T ss_pred CCCCCCeeEEEe-ecCccccccCChhhhHHhhccCCCCceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCHHHHHHH
Confidence 877422377765 56789999999998888874 2599999999999999999999999999999999999999999
Q ss_pred HhcCCCceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHH
Q 008342 472 LYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKH 550 (569)
Q Consensus 472 l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~ 550 (569)
|.++|.|.+++|++.+++..++.+.+++++.++... ..++|.++++++|+.|++|..+++.+ ||+|++||++|+
T Consensus 450 l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~-----~~~~l~~~l~~~l~~~~~P~~i~~~~~iP~t~~GK~~~~ 524 (533)
T PRK07798 450 LKAHPDVADALVVGVPDERWGQEVVAVVQLREGARP-----DLAELRAHCRSSLAGYKVPRAIWFVDEVQRSPAGKADYR 524 (533)
T ss_pred HHhCccceeEEEEeccCcccCceEEEEEEECCCCCC-----CHHHHHHHHhhhcccCCCCeEEEEcccCCCCCcchhhHH
Confidence 999999999999999888888889999888765433 56889999999999999999988776 999999999999
Q ss_pred HHHHHHHh
Q 008342 551 LLRAKAKE 558 (569)
Q Consensus 551 ~l~~~~~~ 558 (569)
.|+++.++
T Consensus 525 ~~~~~~~~ 532 (533)
T PRK07798 525 WAKEQAAE 532 (533)
T ss_pred HHhhhhcc
Confidence 99998875
No 89
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.8e-62 Score=512.63 Aligned_cols=482 Identities=25% Similarity=0.372 Sum_probs=386.6
Q ss_pred HhhhhCCCceeeeeC--CeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCC
Q 008342 28 RAATLHPTRKSVVYG--SKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLN 105 (569)
Q Consensus 28 ~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~ 105 (569)
.+|..+|+++|+.+. ++++||+||.++++++|+.|.++|+++||+|+++++|++++++++|||+++|++++++++.++
T Consensus 5 ~~a~~~p~~~a~~~~~~~~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~~~~~ 84 (501)
T PRK13390 5 THAQIAPDRPAVIVAETGEQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAINHHLT 84 (501)
T ss_pred hhhhhCCCCcEEEecCCCeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEeccccCCC
Confidence 467789999999874 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHhhhhcCCCC
Q 008342 106 ATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEKFLETGDPE 185 (569)
Q Consensus 106 ~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 185 (569)
.+++.++++++++++++++............ .....+.+.... .....+++......+.
T Consensus 85 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----------~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~ 143 (501)
T PRK13390 85 APEADYIVGDSGARVLVASAALDGLAAKVGA----------DLPLRLSFGGEI-----------DGFGSFEAALAGAGPR 143 (501)
T ss_pred HHHHHHHHHhcCCcEEEEcchhhhHHHHhhh----------ccceEEEecCcc-----------cccccHHHHhcccCCC
Confidence 9999999999999999998754332221100 011122222110 0112233332221111
Q ss_pred CCCCCCCCcCceEEEEeccCCCCCCcceee--cchHHHHHH----HHhHhHhCCCCCcEEEEcCCccchhhHHHHHHHHH
Q 008342 186 FAWKPPEDEWQSIALGYTSGTTASPKGVVV--SHRGAYLMS----LNGALIWGMNEGAVFLWTLPMFHGNGWSYTWSLAA 259 (569)
Q Consensus 186 ~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~--t~~~~~~~~----~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~ 259 (569)
.....+.++|+|||||||.||+|.+ +|.++.... ......+.+..++++++.+|++|.+++...+..+.
T Consensus 144 -----~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~~~~~~ 218 (501)
T PRK13390 144 -----LTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRWCSMVHA 218 (501)
T ss_pred -----CCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHHHHHHHh
Confidence 1122357999999999999999996 454443321 11233567889999999999999998866555566
Q ss_pred hcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCC--CCCCCcccceeeeecCCCCCHHHHHHhhh-cCCe
Q 008342 260 LCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPE--DTILPLTNVVNVNTAGAPPPPSLLFAMSQ-KGFR 336 (569)
Q Consensus 260 ~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~--~~~~~l~~l~~~~~~g~~l~~~~~~~~~~-~~~~ 336 (569)
.|+++++.+.+++..+++.|+++++|++.++|+++..+.+.... .... ++++|.++.+|+++++++.+.+.+ ++.+
T Consensus 219 ~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~-~~~l~~v~~~g~~~~~~~~~~~~~~~~~~ 297 (501)
T PRK13390 219 LGGTVVLAKRFDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYD-VSSLRAVIHAAAPCPVDVKHAMIDWLGPI 297 (501)
T ss_pred cCceEEEcCCcCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhcccCC-hhhhheEEEcCCCCCHHHHHHHHHhcCCc
Confidence 78888777788999999999999999999999999998865432 1222 678999999999999999999885 4889
Q ss_pred EecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccccc
Q 008342 337 ITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGY 416 (569)
Q Consensus 337 i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy 416 (569)
+++.||+||+++++.... . ......+++|.|.++ . ++|+|++ +++++.| +.|||+++|++++.||
T Consensus 298 ~~~~YG~tE~~~~~~~~~--~--------~~~~~~~~~G~~~~g-~-~~i~d~~-~~~~~~g--~~Gel~v~~~~~~~gy 362 (501)
T PRK13390 298 VYEYYSSTEAHGMTFIDS--P--------DWLAHPGSVGRSVLG-D-LHICDDD-GNELPAG--RIGTVYFERDRLPFRY 362 (501)
T ss_pred eeeeecccccCceEEecc--h--------hhccCCCCcCCcccc-e-EEEECCC-CCCCCCC--CceEEEEecCCccccc
Confidence 999999999986543221 1 111234678999988 3 8999865 8888887 8999999999999999
Q ss_pred cCCcchhhhhhc---CCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCCCCc
Q 008342 417 LKNPKANEEAFA---NGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGE 493 (569)
Q Consensus 417 ~~~~~~~~~~~~---~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~ 493 (569)
+++++.+...|. ++|++|||+|+++++|.+++.||.||+|+++|.+|+|.+||++|.++|.|.+++|++.+++..++
T Consensus 363 ~~~~~~t~~~~~~~~~~w~~tGDl~~~~~dg~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~~e 442 (501)
T PRK13390 363 LNDPEKTAAAQHPAHPFWTTVGDLGSVDEDGYLYLADRKSFMIISGGVNIYPQETENALTMHPAVHDVAVIGVPDPEMGE 442 (501)
T ss_pred cCChhhhHHhhccCCCceEEcCceEEECCCCeEEEeeccccceeECCeeeCHHHHHHHHHhCCCeeEEEEEeccCcccCc
Confidence 999999888774 57999999999999999999999999999999999999999999999999999999999998899
Q ss_pred eeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHH
Q 008342 494 SPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLR 553 (569)
Q Consensus 494 ~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~ 553 (569)
.+.+++++..+.... ....+++.++++++|+.|++|..+++++ ||+|++||++|++|+
T Consensus 443 ~~~~~v~~~~~~~~~--~~~~~~l~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~L~ 501 (501)
T PRK13390 443 QVKAVIQLVEGIRGS--DELARELIDYTRSRIAHYKAPRSVEFVDELPRTPTGKLVKGLLR 501 (501)
T ss_pred eeEEEEEecCCCCcc--hhhHHHHHHHHHHhcccCCCCcEEEEeccCCCCCccceehhhcC
Confidence 999998877653221 1245789999999999999999999777 999999999999874
No 90
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=7.2e-63 Score=527.42 Aligned_cols=507 Identities=17% Similarity=0.158 Sum_probs=387.1
Q ss_pred ccccccccccCHHHHHHHhhhhCCCceeeeeCC-----eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHH
Q 008342 11 PKISANYTALTPLWFINRAATLHPTRKSVVYGS-----KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYE 85 (569)
Q Consensus 11 ~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~-----~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~ 85 (569)
+.......+.++.++|++++..+|+++|+++.+ +++||+||.++++++|++|.+.|+++||+|+++++|++++++
T Consensus 30 ~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~ 109 (614)
T PRK08180 30 SAEPLGDYPRRLTDRLVHWAQEAPDRVFLAERGADGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHAL 109 (614)
T ss_pred cCCCCCCcCccHHHHHHHHHHHCCCCceeeeccCCCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHH
Confidence 334445567799999999999999999998752 689999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCceEeeccccCC-----HHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcc
Q 008342 86 AQFGAPMAGAVLNSINIRLN-----ATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCD 160 (569)
Q Consensus 86 ~~lA~~~~G~~~v~l~~~~~-----~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 160 (569)
++|||+++|++++|+++.++ .+++.+++++++++++|++.... .......... ....++.......
T Consensus 110 ~~lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~--~~~~~~~~~~------~~~~~i~~~~~~~- 180 (614)
T PRK08180 110 LALAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAA--FARALAAVVP------ADVEVVAVRGAVP- 180 (614)
T ss_pred HHHHHHHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHH--HHHHHhhhcc------CCceEEEecCCCC-
Confidence 99999999999999999998 79999999999999999986421 1111111110 1122333322110
Q ss_pred hhhhHHhhhcchhhHHhhhhcCCCCC--CCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCC--CC
Q 008342 161 SKQLEYALARGAIEYEKFLETGDPEF--AWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMN--EG 236 (569)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~--~~ 236 (569)
......|.+++....... .......++++++|+|||||||.||+|.+||+++..........+++. .+
T Consensus 181 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~ 252 (614)
T PRK08180 181 --------GRAATPFAALLATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEP 252 (614)
T ss_pred --------CcccccHHHHhccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCC
Confidence 011245566554322111 111224578999999999999999999999999988887766666653 56
Q ss_pred cEEEEcCCccchhhHHHHHH-HHHhcceEEEec-cCCh---HHHHHHHHhcCccEEeehHHHHHHHHccCCCC---CCCC
Q 008342 237 AVFLWTLPMFHGNGWSYTWS-LAALCGTSICLR-QVTA---KAVYTAIATHGVTHFCAAPVVLNAIANASPED---TILP 308 (569)
Q Consensus 237 d~~~~~~p~~~~~g~~~~~~-~~~~g~~~~~~~-~~~~---~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~---~~~~ 308 (569)
+++++.+|++|.+|+...+. ++..|+++++.+ .+++ .++++.++++++|+++++|.++..|++..... ....
T Consensus 253 ~~~l~~lPl~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~ 332 (614)
T PRK08180 253 PVLVDWLPWNHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRF 332 (614)
T ss_pred cEEEEecchHHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhh
Confidence 89999999999999865444 455666666654 2443 46788899999999999999999988753221 1112
Q ss_pred cccceeeeecCCCCCHHHHHHhhhc-------CCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeecc
Q 008342 309 LTNVVNVNTAGAPPPPSLLFAMSQK-------GFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICL 381 (569)
Q Consensus 309 l~~l~~~~~~g~~l~~~~~~~~~~~-------~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 381 (569)
++++|.+++||+++++++.+++.+. ++++++.||+||++++++.+... ....+++|.|++++
T Consensus 333 ~~~lr~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~-----------~~~~~svG~p~pg~ 401 (614)
T PRK08180 333 FSRLKLLFYAGAALSQDVWDRLDRVAEATCGERIRMMTGLGMTETAPSATFTTGP-----------LSRAGNIGLPAPGC 401 (614)
T ss_pred ccceeEEEEccCCCCHHHHHHHHHHHHhhcCCCceeeeeecccccCCceEecccc-----------cCCCCcccCccCCc
Confidence 6899999999999999999888752 37899999999998766543211 12347899999999
Q ss_pred CCceeeeCCCCcccCCCCCceEEEEEecCcccccccCCcchhhhhhc-CCeeecCceeEE----cCCCeEEEecccCceE
Q 008342 382 DGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAFA-NGWFHSGDLAVK----HPDNYIEIKDRLKDVI 456 (569)
Q Consensus 382 ~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~tGD~~~~----~~~g~l~~~GR~~d~i 456 (569)
+++++|+. ..|||+++|++++.|||++++.+...|. +|||+|||+|++ +++|+++|+||.+|+|
T Consensus 402 -~v~i~d~~----------~~GEi~vrg~~v~~GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i 470 (614)
T PRK08180 402 -EVKLVPVG----------GKLEVRVKGPNVTPGYWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLMFDGRIAEDF 470 (614)
T ss_pred -EEEEecCC----------CCcEEEEecCccchhhcCChhHhHhhcccCCceeccceEEecCCcCCCCceEEecchhhhE
Confidence 69998753 4699999999999999999999998884 899999999999 4679999999999988
Q ss_pred E-eCceeec--hHHHHHHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcch----------hhhhhHHHHHHHHHHh
Q 008342 457 I-SGGENIS--SVEVEKVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADE----------LDKGKLAEDVSKFCRA 523 (569)
Q Consensus 457 ~-~~G~~v~--~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~----------~~~~~~~~~l~~~~~~ 523 (569)
+ .+|++++ +.|+|.++.+||.|.+++|++.+++. +.++|++.++... .......++|.+++++
T Consensus 471 ~~~~G~~i~~~p~Eie~~l~~~p~V~~a~V~g~~~~~----~~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 546 (614)
T PRK08180 471 KLSSGTWVSVGPLRARAVSAGAPLVQDVVITGHDRDE----IGLLVFPNLDACRRLAGLLADASLAEVLAHPAVRAAFRE 546 (614)
T ss_pred EcCCCcEecchhhhHHHHhhcCchhheEEEEcCCCCc----eEEEEEcCHHHHHHHHhhcccCCHHHHhcCHHHHHHHHH
Confidence 8 6898777 77888999999999999999987764 7788887654210 0000123456666666
Q ss_pred cCCCCc--------CCceEEecc-CCC------CCCCcccHHHHHHHHHhcC
Q 008342 524 KMPSYW--------VPKSVVFAA-LPK------SATGKIQKHLLRAKAKEMG 560 (569)
Q Consensus 524 ~l~~~~--------~p~~i~~~~-lP~------t~~GKi~r~~l~~~~~~~~ 560 (569)
.|..+. +|..+.+.+ +|+ |++||+.|+++.+.|.++-
T Consensus 547 ~l~~~~~~~~~~~~~p~~~~~~~~~p~~~~gk~t~~~~~~R~~~~~~y~~~i 598 (614)
T PRK08180 547 RLARLNAQATGSSTRVARALLLDEPPSLDAGEITDKGYINQRAVLARRAALV 598 (614)
T ss_pred HHHHHHhhccccHhheeEEEEecCCCCCccCccCccccccHHHHHHHhHHHH
Confidence 665555 899988776 886 4566889999998888653
No 91
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=3.4e-63 Score=612.53 Aligned_cols=495 Identities=23% Similarity=0.282 Sum_probs=415.3
Q ss_pred ccccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCce
Q 008342 17 YTALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAV 96 (569)
Q Consensus 17 ~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 96 (569)
..+.++.++|+++++++|+++|+++.++++||+||+++++++|+.|.+.|+++|++|++++++++++++++|||+++|++
T Consensus 509 ~~~~~~~~~~~~~a~~~pd~~Al~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vv~~lail~aG~~ 588 (3956)
T PRK12467 509 YAPDCVHQLIEAQARQHPERPALVFGEQVLSYAELNRQANRLAHVLIAAGVGPDVLVGIAVERSIEMVVGLLAVLKAGGA 588 (3956)
T ss_pred CCCCCHHHHHHHHHHHCCCCeEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCcE
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHH
Q 008342 97 LNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYE 176 (569)
Q Consensus 97 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 176 (569)
++|++|.++.+++.++++++++++++++++....+.. . ....++.+.....
T Consensus 589 ~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~-----~-------~~~~~~~~~~~~~----------------- 639 (3956)
T PRK12467 589 YVPLDPEYPQDRLAYMLDDSGVRLLLTQSHLLAQLPV-----P-------AGLRSLCLDEPAD----------------- 639 (3956)
T ss_pred EeccCCCChHHHHHHHHHhcCCCEEEechhhhhhccc-----c-------cCccEEEeccccc-----------------
Confidence 9999999999999999999999999998743221110 0 1112222222110
Q ss_pred hhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHHHH
Q 008342 177 KFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTWS 256 (569)
Q Consensus 177 ~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~ 256 (569)
.+... ..........++++++|+|||||||.||||+++|+++.+...+....+++.++|+++...|++|..++...+.
T Consensus 640 -~~~~~-~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~ 717 (3956)
T PRK12467 640 -LLCGY-SGHNPEVALDPDNLAYVIYTSGSTGQPKGVAISHGALANYVCVIAERLQLAADDSMLMVSTFAFDLGVTELFG 717 (3956)
T ss_pred -ccccc-CCCCCCCCCCCCCeEEEEECCCCCCCcCEEEEecHHHHHHHHHHHHhcCCCCCCEEEEecCccHhHHHHHHHH
Confidence 00001 1111112346789999999999999999999999999999998888899999999999999999999988888
Q ss_pred HHHhcceEEEecc---CChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhhc
Q 008342 257 LAALCGTSICLRQ---VTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQK 333 (569)
Q Consensus 257 ~~~~g~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~ 333 (569)
++..|+++++.+. +++..+++.|+++++|++.++|+++..+.+...... ..++|.+++|||++++++.++|.+.
T Consensus 718 ~L~~G~~lv~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~---~~~lr~i~~gGe~l~~~~~~~~~~~ 794 (3956)
T PRK12467 718 ALASGATLHLLPPDCARDAEAFAALMADQGVTVLKIVPSHLQALLQASRVAL---PRPQRALVCGGEALQVDLLARVRAL 794 (3956)
T ss_pred HHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEcCHHHHHHHHhhhcccc---CCcccEEEEEeecCCHHHHHHHHHh
Confidence 8889999888753 689999999999999999999999999987543222 5678999999999999999999865
Q ss_pred --CCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCc
Q 008342 334 --GFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSC 411 (569)
Q Consensus 334 --~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~ 411 (569)
+++++|.||+||++..++.+...... ......++|.|++++ +++|+|++ ++++|.| +.|||+|+|+.
T Consensus 795 ~~~~~l~n~YG~TE~~~~~~~~~~~~~~-------~~~~~~~iG~p~~~~-~~~i~d~~-~~~vp~G--~~GEL~i~G~~ 863 (3956)
T PRK12467 795 GPGARLINHYGPTETTVGVSTYELSDEE-------RDFGNVPIGQPLANL-GLYILDHY-LNPVPVG--VVGELYIGGAG 863 (3956)
T ss_pred CCCCEEEeCcCCChhhhheeeEeccccc-------ccCCCCcccCCcCCC-EEEEECCC-CCCCCCC--CceEEEecccc
Confidence 68999999999998776654322110 001125799999999 69999986 8999988 89999999999
Q ss_pred ccccccCCcchhhhhhc--------CCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEE
Q 008342 412 VMKGYLKNPKANEEAFA--------NGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAV 483 (569)
Q Consensus 412 ~~~gy~~~~~~~~~~~~--------~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v 483 (569)
+++||+++++.+.++|. .+||+|||+|++++||.++++||.||+||++|++|+|.+||+.|.++|+|.+++|
T Consensus 864 v~~GYl~~p~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~vki~G~rI~~~eIE~~L~~~p~V~~a~v 943 (3956)
T PRK12467 864 LARGYHRRPALTAERFVPDPFGADGGRLYRTGDLARYRADGVIEYLGRMDHQVKIRGFRIELGEIEARLLAQPGVREAVV 943 (3956)
T ss_pred cchhhcCCccccHhhCcCCCCCCCCceeEecCceeEEcCCCcEEEeccccCeEEECCEecCHHHHHHHHHhCCCcceEEE
Confidence 99999999999999883 2399999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHH
Q 008342 484 VARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAK 557 (569)
Q Consensus 484 ~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~ 557 (569)
++.++. .++.++++++..............++|++++++.||.|++|..+++.+ ||+|++||++|++|++...
T Consensus 944 ~~~~~~-~~~~lva~vv~~~~~~~~~~~~~~~~l~~~l~~~Lp~y~vP~~~~~l~~lP~t~~GKidR~~L~~~~~ 1017 (3956)
T PRK12467 944 LAQPGD-AGLQLVAYLVPAAVADGAEHQATRDELKAQLRQVLPDYMVPAHLLLLDSLPLTPNGKLDRKALPKPDA 1017 (3956)
T ss_pred EEEcCC-CCcEEEEEEEecccccccccccCHHHHHHHHHhhCchhcCCceEeeecccCCCCCCCcCHhhcCCccc
Confidence 986544 467789998865433222222356889999999999999999998777 9999999999999987543
No 92
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=3e-62 Score=513.56 Aligned_cols=491 Identities=22% Similarity=0.266 Sum_probs=407.7
Q ss_pred cCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEee
Q 008342 20 LTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNS 99 (569)
Q Consensus 20 ~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 99 (569)
|++.++|++++..+|+++++.+.++++||.||.+++.++|.+|.+.|+++|++|+++++|+.+++++++||+++|+++++
T Consensus 2 ~~~~~~l~~~a~~~p~~~~~~~~~~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~~~~~ 81 (503)
T PRK04813 2 MDIIETIEEFAQTQPDFPAYDYLGEKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAGHAYIP 81 (503)
T ss_pred chHHHHHHHHHHhCCCceEEEeCCcEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEec
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHhhh
Q 008342 100 INIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEKFL 179 (569)
Q Consensus 100 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l 179 (569)
+++.++.+++.++++..++++++++.+..... .....+...+ +.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~------------------~~~~~ 128 (503)
T PRK04813 82 VDVSSPAERIEMIIEVAKPSLIIATEELPLEI---------------LGIPVITLDE------------------LKDIF 128 (503)
T ss_pred CCCCChHHHHHHHHHhcCCCEEEecccccccc---------------cCCcEEehHH------------------hhhhh
Confidence 99999999999999999999999987641100 0111111110 11111
Q ss_pred hcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHHHHHHH
Q 008342 180 ETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTWSLAA 259 (569)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~ 259 (569)
.. ...........++++++++|||||||.||+|.++|+++.....+....+++..+++++...|++|..++...+..+.
T Consensus 129 ~~-~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~ 207 (503)
T PRK04813 129 AT-GNPYDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFALPEGPQFLNQAPYSFDLSVMDLYPTLA 207 (503)
T ss_pred hc-cccccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcCCCcCceeeecCCcchhHhHHHHHHHHh
Confidence 10 11111122346678999999999999999999999999988887777888999999999999999999887777778
Q ss_pred hcceEEEecc---CChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhh-c-C
Q 008342 260 LCGTSICLRQ---VTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQ-K-G 334 (569)
Q Consensus 260 ~g~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~-~-~ 334 (569)
.|++++..+. .++..+++.++++++|++..+|++++.+.......... +++++.++++|+++++.+.+++.+ + +
T Consensus 208 ~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~-~~~l~~i~~~G~~l~~~~~~~~~~~~~~ 286 (503)
T PRK04813 208 SGGTLVALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFNEEH-LPNLTHFLFCGEELPHKTAKKLLERFPS 286 (503)
T ss_pred cCCEEEEcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccCccc-CCCceEEEEecCcCCHHHHHHHHHHCCC
Confidence 8888887754 57899999999999999999999998876654333333 789999999999999999999885 4 7
Q ss_pred CeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccc
Q 008342 335 FRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMK 414 (569)
Q Consensus 335 ~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~ 414 (569)
+++++.||+||++..++.....+.. .......++|.+.+++ +++|+|++ +.+++.+ +.|||+++|++++.
T Consensus 287 ~~~~~~yG~tE~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~-~~~i~d~~-~~~~~~g--~~Gel~v~~~~~~~ 356 (503)
T PRK04813 287 ATIYNTYGPTEATVAVTSIEITDEM------LDQYKRLPIGYAKPDS-PLLIIDEE-GTKLPDG--EQGEIVISGPSVSK 356 (503)
T ss_pred ceEEeCcccchheeEEEEEEecccc------cccCCCCcccccCCCC-EEEEECCC-CCCCCCC--CceEEEEecccccc
Confidence 8999999999997655433221110 1112235789999999 69999975 8888877 78999999999999
Q ss_pred cccCCcchhhhhhc--C--CeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCC
Q 008342 415 GYLKNPKANEEAFA--N--GWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDER 490 (569)
Q Consensus 415 gy~~~~~~~~~~~~--~--g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~ 490 (569)
||++++..+...|. + +||+|||++++ ++|.+++.||.+|+|+.+|.++++.+||+++.++|+|.+++|++.++..
T Consensus 357 gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~ 435 (503)
T PRK04813 357 GYLNNPEKTAEAFFTFDGQPAYHTGDAGYL-EDGLLFYQGRIDFQIKLNGYRIELEEIEQNLRQSSYVESAVVVPYNKDH 435 (503)
T ss_pred ccCCChhHhHHhhccCCCceeEECCceEEe-eCCeEEEeccccceEEECcEEeCHHHHHHHHHhCCCcceEEEEEeeCCC
Confidence 99999998888773 3 49999999999 8999999999999999999999999999999999999999999987776
Q ss_pred CCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHH
Q 008342 491 WGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAK 557 (569)
Q Consensus 491 ~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~ 557 (569)
.++.++++++..++... ......+++.++++++++.+++|..+.+++ ||+|++||++|++|++.++
T Consensus 436 ~~~~~~~~v~~~~~~~~-~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~ 502 (503)
T PRK04813 436 KVQYLIAYVVPKEEDFE-REFELTKAIKKELKERLMEYMIPRKFIYRDSLPLTPNGKIDRKALIEEVN 502 (503)
T ss_pred CccEEEEEEEecccccc-ccchhHHHHHHHHHhhCccccCCeEEEEeccCCCCCCCCCcHHHHHHHhc
Confidence 67888888887764221 112255789999999999999999999877 9999999999999998875
No 93
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=4.9e-63 Score=620.35 Aligned_cols=483 Identities=21% Similarity=0.253 Sum_probs=412.9
Q ss_pred ccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEe
Q 008342 19 ALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLN 98 (569)
Q Consensus 19 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (569)
+.++.++|+++++++|+++|+++.++++||+||.++++++|+.|.+.|+++|++|+++++|++++++++|||+++|++++
T Consensus 510 ~~~~~~~~~~~a~~~p~~~A~~~~~~~~TY~eL~~~~~~lA~~L~~~gv~~g~~V~l~~~~s~~~i~~~la~~~aG~~~v 589 (5163)
T PRK12316 510 QRGVHRLFEEQVERTPEAPALAFGEETLDYAELNRRANRLAHALIERGVGPDVLVGVAMERSIEMVVALLAILKAGGAYV 589 (5163)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCEEe
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHhh
Q 008342 99 SINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEKF 178 (569)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (569)
|++|.++.+++.+++++++++++|++......+.. . ....++.++.... +
T Consensus 590 pld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~----~--------~~~~~~~~~~~~~------------------~ 639 (5163)
T PRK12316 590 PLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLPL----A--------AGVQVLDLDRPAA------------------W 639 (5163)
T ss_pred ccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCCc----c--------cCceEEEecCcch------------------h
Confidence 99999999999999999999999998764322110 0 1122333332110 0
Q ss_pred hhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHHHHHH
Q 008342 179 LETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTWSLA 258 (569)
Q Consensus 179 l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~ 258 (569)
+... ..........++++++|+|||||||.||||+++|+++.+...+....++++++|+++...|++|..++...+.++
T Consensus 640 ~~~~-~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~p~~fd~~~~~~~~~L 718 (5163)
T PRK12316 640 LEGY-SEENPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAYGLGVGDTVLQKTPFSFDVSVWEFFWPL 718 (5163)
T ss_pred hccC-CCCCCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhcCCCCCCEEEeeCCeehHHHHHHHHHHH
Confidence 1111 111111234678999999999999999999999999999999988999999999999999999999998888888
Q ss_pred HhcceEEEec---cCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhh-c-
Q 008342 259 ALCGTSICLR---QVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQ-K- 333 (569)
Q Consensus 259 ~~g~~~~~~~---~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~-~- 333 (569)
+.|+++++.+ .+++..+++.++++++|++.++|++++.|.+..... . ++++|.+++||+++++++.+++.+ .
T Consensus 719 ~~G~~l~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~--~-~~~l~~~~~gGe~l~~~~~~~~~~~~~ 795 (5163)
T PRK12316 719 MSGARLVVAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDEDVA--S-CTSLRRIVCSGEALPADAQEQVFAKLP 795 (5163)
T ss_pred hCCCEEEECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhccccc--c-CCCccEEEEeeccCCHHHHHHHHHhCC
Confidence 8899988874 378999999999999999999999999998653322 2 789999999999999999999864 3
Q ss_pred CCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCccc
Q 008342 334 GFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVM 413 (569)
Q Consensus 334 ~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~ 413 (569)
+++++|.||+||++..++...... ......++|.|++++ +++|+|++ ++++|.| +.|||+|+|++++
T Consensus 796 ~~~l~n~YG~TE~~~~~~~~~~~~---------~~~~~~~iG~p~~~~-~~~i~d~~-~~~~p~G--~~GEl~i~G~~v~ 862 (5163)
T PRK12316 796 QAGLYNLYGPTEAAIDVTHWTCVE---------EGGDSVPIGRPIANL-ACYILDAN-LEPVPVG--VLGELYLAGRGLA 862 (5163)
T ss_pred CCeEEeCcCcChheeeeeEEeccc---------ccCCCCCCccccCCC-EEEEECCC-CCCCCCC--CceEEEecccccC
Confidence 789999999999986554332111 112236799999999 69999986 8999988 8999999999999
Q ss_pred ccccCCcchhhhhhc-------CCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEee
Q 008342 414 KGYLKNPKANEEAFA-------NGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVAR 486 (569)
Q Consensus 414 ~gy~~~~~~~~~~~~-------~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~ 486 (569)
.||+++++.+.+.|. ++||+|||+|++++||.++++||.||+||++|++|+|.|||++|.+||.|.+|+|++.
T Consensus 863 ~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~~ik~~G~rI~~~EIE~~l~~~p~V~~a~V~~~ 942 (5163)
T PRK12316 863 RGYHGRPGLTAERFVPSPFVAGERMYRTGDLARYRADGVIEYAGRIDHQVKLRGLRIELGEIEARLLEHPWVREAAVLAV 942 (5163)
T ss_pred hhhCCChhhhhhhCCCCCCCCCCeeEecCccEEECCCCCEEeecccCCEEEEceEEcChHHHHHHHHhCCCcceEEEEEc
Confidence 999999999998883 3599999999999999999999999999999999999999999999999999999988
Q ss_pred cCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHH
Q 008342 487 PDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAK 557 (569)
Q Consensus 487 ~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~ 557 (569)
+ ++.++++|+..++... ..+.++++++++||.|++|+.+++++ ||+|++||++|++|.+...
T Consensus 943 ~----~~~lva~vv~~~~~~~-----~~~~l~~~l~~~Lp~y~vP~~i~~v~~lP~t~~GKidr~~L~~~~~ 1005 (5163)
T PRK12316 943 D----GKQLVGYVVLESEGGD-----WREALKAHLAASLPEYMVPAQWLALERLPLTPNGKLDRKALPAPEA 1005 (5163)
T ss_pred C----CCeEEEEEEccCCCCC-----CHHHHHHHHHhhCCCccCCCeEEEHhhCCCCCCCChhHHhhcCccc
Confidence 6 5679999998765433 45789999999999999999999877 9999999999999986543
No 94
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.4e-62 Score=530.61 Aligned_cols=511 Identities=18% Similarity=0.259 Sum_probs=385.0
Q ss_pred ccCHHHHHHHhhhhCCCceeeeeC---------------------------CeeeeHHHHHHHHHHHHHHHHhcCCCCCC
Q 008342 19 ALTPLWFINRAATLHPTRKSVVYG---------------------------SKHYTWHQTYRRCRRFASALSKLSIGLGT 71 (569)
Q Consensus 19 ~~~l~~~l~~~a~~~p~~~a~~~~---------------------------~~~~Ty~el~~~~~~la~~L~~~g~~~g~ 71 (569)
..|+.++|.++++++|+++|+.+. .+.+||+||.++++++|++|.++|+++||
T Consensus 68 ~~t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd 147 (700)
T PTZ00216 68 GPNFLQRLERICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKGS 147 (700)
T ss_pred CCCHHHHHHHHHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 458999999999999999999873 37899999999999999999999999999
Q ss_pred EEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeE
Q 008342 72 TVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHL 151 (569)
Q Consensus 72 ~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (569)
+|+|+++|+++|++++|||+++|++++|+++.++.+++.+++++++++++|++.+....+........ .....+
T Consensus 148 ~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~------~~~~~i 221 (700)
T PTZ00216 148 NVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMKSGG------MPNTTI 221 (700)
T ss_pred EEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhhhcc------CCceEE
Confidence 99999999999999999999999999999999999999999999999999998765444333222110 012345
Q ss_pred EEecCCCcchhhhHHhhhcchhhHHhhhhcCC---CCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhH
Q 008342 152 IVIGDESCDSKQLEYALARGAIEYEKFLETGD---PEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGA 228 (569)
Q Consensus 152 i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~ 228 (569)
+.+++..... ........+|++++.... ...+...+..++++++|+|||||||.||||++||+++++......
T Consensus 222 i~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~ 297 (700)
T PTZ00216 222 IYLDSLPASV----DTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALE 297 (700)
T ss_pred EEECCCcccc----ccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHH
Confidence 5554321110 001123456777765541 111122334678999999999999999999999999988876655
Q ss_pred hHh----C-CCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEeccCChHHHHH-------HHHhcCccEEeehHHHHHH
Q 008342 229 LIW----G-MNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICLRQVTAKAVYT-------AIATHGVTHFCAAPVVLNA 296 (569)
Q Consensus 229 ~~~----~-~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~i~~~~~t~l~~~P~~~~~ 296 (569)
..+ + +.++|++++.+|++|.+++......+ .+|+.+.+. ++..+.+ .+++++||++.++|.+++.
T Consensus 298 ~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l-~~G~~v~~~--~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~ 374 (700)
T PTZ00216 298 DRLNDLIGPPEEDETYCSYLPLAHIMEFGVTNIFL-ARGALIGFG--SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDT 374 (700)
T ss_pred hhcccccCCCCCCCEEEEEChHHHHHHHHHHHHHH-HcCCEEEEC--CHHHhhhhhccccchHHHcCCcEEEechHHHHH
Confidence 433 2 46889999999999999986555444 444444442 3445544 6889999999999999988
Q ss_pred HHccCCCC-------------------------C-C--------------CCcccceeeeecCCCCCHHHHHHhhhc-CC
Q 008342 297 IANASPED-------------------------T-I--------------LPLTNVVNVNTAGAPPPPSLLFAMSQK-GF 335 (569)
Q Consensus 297 l~~~~~~~-------------------------~-~--------------~~l~~l~~~~~~g~~l~~~~~~~~~~~-~~ 335 (569)
+.+..... . . ...+++|.+++||+++++++.++++.. +
T Consensus 375 l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~~- 453 (700)
T PTZ00216 375 IKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVFG- 453 (700)
T ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHhh-
Confidence 76431100 0 0 001579999999999999998877754 6
Q ss_pred eEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcc-cCCCCCceEEEEEecCcccc
Q 008342 336 RITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQP-VPADGKTIGEIVMRGSCVMK 414 (569)
Q Consensus 336 ~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~-~~~~~~~~Gel~v~~~~~~~ 414 (569)
++++.||+||+++.++..... ....+++|.|++++ +++|+|.++... .+.+ ..|||+++|++++.
T Consensus 454 ~l~~~YG~TEt~~~~~~~~~~-----------~~~~~svG~p~~g~-evkI~d~~~~~~~~~~~--~~GEL~vrG~~v~~ 519 (700)
T PTZ00216 454 MVIQGWGLTETVCCGGIQRTG-----------DLEPNAVGQLLKGV-EMKLLDTEEYKHTDTPE--PRGEILLRGPFLFK 519 (700)
T ss_pred hHhhccCcccccccccccCCC-----------CCCCCCcCCcCCCe-EEEEeechhhccCCCCC--CCceEEEcCCcccc
Confidence 999999999998655443211 12247899999999 699999864221 2222 46999999999999
Q ss_pred cccCCcchhhhhh-cCCeeecCceeEEcCCCeEEEecccCceEE-eCceeechHHHHHHHhcCCCceee--EEEeecCCC
Q 008342 415 GYLKNPKANEEAF-ANGWFHSGDLAVKHPDNYIEIKDRLKDVII-SGGENISSVEVEKVLYLHPLVLEA--AVVARPDER 490 (569)
Q Consensus 415 gy~~~~~~~~~~~-~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~v~~~--~v~~~~~~~ 490 (569)
|||++++.+.+.| .+|||+|||+|++++||+++|+||.||+|| .+|++|.|.+||.+|.+||.|.++ +|++.++.
T Consensus 520 GY~~~pe~T~~~f~~dGw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~~~p~V~~~~~~v~~~~~~- 598 (700)
T PTZ00216 520 GYYKQEELTREVLDEDGWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYGQNELVVPNGVCVLVHPAR- 598 (700)
T ss_pred hhcCChhHhhhhccccCCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHhcCcCcccceEEEEEecCC-
Confidence 9999999999999 589999999999999999999999999998 999999999999999999999973 34443322
Q ss_pred CCceeeEEEEecCCcch---------------hhhhhHHHHHHHHH-----HhcCCCCcCCceEEecc--C-C----CCC
Q 008342 491 WGESPCAFVTLKPEADE---------------LDKGKLAEDVSKFC-----RAKMPSYWVPKSVVFAA--L-P----KSA 543 (569)
Q Consensus 491 ~g~~~~~~v~~~~~~~~---------------~~~~~~~~~l~~~~-----~~~l~~~~~p~~i~~~~--l-P----~t~ 543 (569)
..+++++++...... .+.....+.+.+.+ ++.+..|.+++.+.+.. + + +|+
T Consensus 599 --~~l~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~~~~~~f~~~~g~lT~ 676 (700)
T PTZ00216 599 --SYICALVLTDEAKAMAFAKEHGIEGEYPAILKDPEFQKKATESLQETARAAGRKSFEIVRHVRVLSDEWTPENGVLTA 676 (700)
T ss_pred --ceEEEEEecCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHhcCCCCceeEeEEEEECCCCCCCCCCCCh
Confidence 357888876532100 00011222333322 23588899999888654 2 2 599
Q ss_pred CCcccHHHHHHHHHhcC
Q 008342 544 TGKIQKHLLRAKAKEMG 560 (569)
Q Consensus 544 ~GKi~r~~l~~~~~~~~ 560 (569)
++|++|+.+++.|.+.-
T Consensus 677 t~K~~R~~i~~~y~~~i 693 (700)
T PTZ00216 677 AMKLKRRVIDERYADLI 693 (700)
T ss_pred hhccchHHHHHHHHHHH
Confidence 99999999999998753
No 95
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.6e-61 Score=513.41 Aligned_cols=511 Identities=24% Similarity=0.350 Sum_probs=408.1
Q ss_pred cCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHh-cCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEe
Q 008342 20 LTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSK-LSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLN 98 (569)
Q Consensus 20 ~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~-~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (569)
.++.++|+++++++|+++|+.+.++++||.||.++++++|.+|.+ .|+++|++|+++++|++++++++|||+++|++++
T Consensus 23 ~~l~~~l~~~a~~~p~~~a~~~~~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 102 (560)
T PRK08974 23 QSLVDMFEQAVARYADQPAFINMGEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILRAGMIVV 102 (560)
T ss_pred ccHHHHHHHHHHhCCCCceEEECCccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEe
Confidence 479999999999999999999999999999999999999999984 8999999999999999999999999999999999
Q ss_pred eccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCc--chhh--h----------
Q 008342 99 SINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESC--DSKQ--L---------- 164 (569)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~--~---------- 164 (569)
|++|.++.+++.++++.+++++++++++....+..+..... ...++....... .... .
T Consensus 103 ~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (560)
T PRK08974 103 NVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKTP--------VKHVILTRMGDQLSTAKGTLVNFVVKYIKRL 174 (560)
T ss_pred ccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhcC--------cceEEEecccccccccccccccchhhhcccc
Confidence 99999999999999999999999998876555544332211 111111110000 0000 0
Q ss_pred -HHhhhcchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhC---CCCCcEEE
Q 008342 165 -EYALARGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWG---MNEGAVFL 240 (569)
Q Consensus 165 -~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~---~~~~d~~~ 240 (569)
+....+....+.+.+...............+++++++|||||||.||+|.++|.++..+.......+. ...++.++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~ 254 (560)
T PRK08974 175 VPKYHLPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVV 254 (560)
T ss_pred cccccCCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEEE
Confidence 00000111222222222211111112245789999999999999999999999999876654433332 34567788
Q ss_pred EcCCccchhhHHH-HHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeec
Q 008342 241 WTLPMFHGNGWSY-TWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTA 318 (569)
Q Consensus 241 ~~~p~~~~~g~~~-~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~ 318 (569)
..+|++|.+++.. .+..+..|++.++. ...++..+++.++++++|.+.++|+++..+.......... ++++|.+++|
T Consensus 255 ~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~-~~~lr~~~~g 333 (560)
T PRK08974 255 TALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELD-FSSLKLSVGG 333 (560)
T ss_pred EeCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCC-ccceeEEEec
Confidence 8999999998754 33444566666665 3467889999999999999999999999998765444333 7899999999
Q ss_pred CCCCCHHHHHHhhhc-CCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCC
Q 008342 319 GAPPPPSLLFAMSQK-GFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPA 397 (569)
Q Consensus 319 g~~l~~~~~~~~~~~-~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~ 397 (569)
|+++++.+.++|++. |+++++.||+||++..++.+.... ....+++|.|.+++ .++++|++ +++++.
T Consensus 334 g~~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~~G~~~~~~-~~~i~~~~-~~~~~~ 401 (560)
T PRK08974 334 GMAVQQAVAERWVKLTGQYLLEGYGLTECSPLVSVNPYDL----------DYYSGSIGLPVPST-EIKLVDDD-GNEVPP 401 (560)
T ss_pred CccCCHHHHHHHHHHhCCcEEeeecccccCceeeccCCCC----------cccCCccccCcCCC-EEEEECCC-CCCCCC
Confidence 999999999998864 899999999999987766553221 12236789999999 69999975 888888
Q ss_pred CCCceEEEEEecCcccccccCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCC
Q 008342 398 DGKTIGEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPL 477 (569)
Q Consensus 398 ~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~ 477 (569)
| +.|||+++|+.++.||+++++.+...|.+|||+|||+++++++|.++++||.+|+|+++|.+++|.+||..|.+++.
T Consensus 402 g--~~Gel~v~g~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~IE~~l~~~~~ 479 (560)
T PRK08974 402 G--EPGELWVKGPQVMLGYWQRPEATDEVIKDGWLATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMLHPK 479 (560)
T ss_pred C--CceEEEEecCCcchhhcCChhhhhhhhhcCCcccCCEEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCC
Confidence 7 78999999999999999999999888989999999999999999999999999999999999999999999999999
Q ss_pred ceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHH
Q 008342 478 VLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKA 556 (569)
Q Consensus 478 v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~ 556 (569)
|.+++|++.++...|+.+.++++..+.. . ..+++.+++.++++.+.+|..+.+++ ||+|++||++|+.|++..
T Consensus 480 v~~~~v~~~~~~~~g~~~~~~v~~~~~~-~-----~~~~l~~~l~~~l~~~~~P~~~~~~~~lP~t~~GK~~r~~l~~~~ 553 (560)
T PRK08974 480 VLEVAAVGVPSEVSGEAVKIFVVKKDPS-L-----TEEELITHCRRHLTGYKVPKLVEFRDELPKSNVGKILRRELRDEA 553 (560)
T ss_pred eeEEEEEeeecCCcceEEEEEEECCCCC-C-----CHHHHHHHHHhhcccccCCcEEEEhhhCCCCCCCcEeHHHHHHHH
Confidence 9999999999888888788877654322 2 34678999999999999999999776 999999999999999877
Q ss_pred Hhc
Q 008342 557 KEM 559 (569)
Q Consensus 557 ~~~ 559 (569)
.+.
T Consensus 554 ~~~ 556 (560)
T PRK08974 554 RAK 556 (560)
T ss_pred Hhh
Confidence 654
No 96
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-62 Score=509.57 Aligned_cols=454 Identities=27% Similarity=0.365 Sum_probs=381.1
Q ss_pred hhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHH
Q 008342 31 TLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVA 110 (569)
Q Consensus 31 ~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~ 110 (569)
...++++|++++++++||+||.++++++|..|. ++|+|+++++|+++++++++||+++|++++|+++.++.+++.
T Consensus 11 ~~~~~~~a~~~~~~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~ 85 (471)
T PRK07787 11 AAADIADAVRIGGRVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSGVAERR 85 (471)
T ss_pred cccCCceEEEeCCcEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCChHHHH
Confidence 457889999999999999999999999999996 479999999999999999999999999999999999999999
Q ss_pred HHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHhhhhcCCCCCCCCC
Q 008342 111 FILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEKFLETGDPEFAWKP 190 (569)
Q Consensus 111 ~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 190 (569)
.+++++++++++++.+... . ....+ .+.... ..+. ...
T Consensus 86 ~~l~~~~~~~il~~~~~~~---------~-------~~~~~-~~~~~~--------------~~~~-----------~~~ 123 (471)
T PRK07787 86 HILADSGAQAWLGPAPDDP---------A-------GLPHV-PVRLHA--------------RSWH-----------RYP 123 (471)
T ss_pred HHHHhcCCCEEEecCCccc---------c-------cccce-eeeccc--------------cccc-----------cCC
Confidence 9999999999999764110 0 00000 000000 0000 001
Q ss_pred CCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHHHHH-HHhcceEEEecc
Q 008342 191 PEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTWSL-AALCGTSICLRQ 269 (569)
Q Consensus 191 ~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~-~~~g~~~~~~~~ 269 (569)
...++++++++|||||||.||+|.++|.++..........+++.++++++..+|++|.+|+...+.. +..|++++....
T Consensus 124 ~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~ 203 (471)
T PRK07787 124 EPDPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGR 203 (471)
T ss_pred CCCCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCC
Confidence 1356899999999999999999999999999988888888889999999999999999998765444 555666666677
Q ss_pred CChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhh-cCCeEecccccccCCC
Q 008342 270 VTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQ-KGFRITHTYGLTELTG 348 (569)
Q Consensus 270 ~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~-~~~~i~~~YG~tE~~~ 348 (569)
+++..+++.++ +++|++.++|+++..+.+..... .. ++++|.+++||+++++.+.+++.+ ++.++++.||+||++.
T Consensus 204 ~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~~~-~~-l~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~ 280 (471)
T PRK07787 204 PTPEAYAQALS-EGGTLYFGVPTVWSRIAADPEAA-RA-LRGARLLVSGSAALPVPVFDRLAALTGHRPVERYGMTETLI 280 (471)
T ss_pred CCHHHHHHHHh-hCceEEEcchHHHHHHHhCcccc-cc-ccceeEEEECCCCCCHHHHHHHHHHcCCCeecccCccccCc
Confidence 89999999999 99999999999999998754322 22 789999999999999999999885 5899999999999985
Q ss_pred CccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccccccCCcchhhhhhc
Q 008342 349 PASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAFA 428 (569)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~ 428 (569)
..+.... ......++|.|.+++ .++|+|++ +.+++..+++.|||+++|++++.||+++++.+...|.
T Consensus 281 ~~~~~~~-----------~~~~~~~vG~~~~g~-~~~i~d~~-~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~ 347 (471)
T PRK07787 281 TLSTRAD-----------GERRPGWVGLPLAGV-ETRLVDED-GGPVPHDGETVGELQVRGPTLFDGYLNRPDATAAAFT 347 (471)
T ss_pred ceecCCC-----------CcccCCcccccCCCc-EEEEECCC-CCCCCCCCCCceEEEEECcccchhhcCChhhchhccc
Confidence 4333211 112236799999999 69999987 7888743335899999999999999999999988885
Q ss_pred -CCeeecCceeEEcCCCeEEEeccc-CceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcc
Q 008342 429 -NGWFHSGDLAVKHPDNYIEIKDRL-KDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEAD 506 (569)
Q Consensus 429 -~g~~~tGD~~~~~~~g~l~~~GR~-~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~ 506 (569)
+|||+|||+|++++||.+++.||. ||+++.+|.+|+|.+||++|.+++.|.+++|++.++...++.++++++.....
T Consensus 348 ~~~~~~TGDlg~~~~dg~l~~~GR~~d~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~- 426 (471)
T PRK07787 348 ADGWFRTGDVAVVDPDGMHRIVGRESTDLIKSGGYRIGAGEIETALLGHPGVREAAVVGVPDDDLGQRIVAYVVGADDV- 426 (471)
T ss_pred CCCceecCceEEEcCCCCEEEeCCCCceeEeeCCEEECHHHHHHHHHhCCCcceEEEEcccccccCeEEEEEEEeCCCC-
Confidence 899999999999999999999996 89999999999999999999999999999999999888889999998873322
Q ss_pred hhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHH
Q 008342 507 ELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRA 554 (569)
Q Consensus 507 ~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~ 554 (569)
..+++.+++++.++++++|..+.+++ ||+|++||++|++|++
T Consensus 427 ------~~~~l~~~l~~~l~~~~~P~~i~~~~~iP~~~~GKi~r~~L~~ 469 (471)
T PRK07787 427 ------AADELIDFVAQQLSVHKRPREVRFVDALPRNAMGKVLKKQLLS 469 (471)
T ss_pred ------CHHHHHHHHHhhcccccCCcEEEEeccCCCCCCccccHHHhcc
Confidence 45789999999999999999998777 9999999999999975
No 97
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=6.3e-63 Score=619.37 Aligned_cols=488 Identities=21% Similarity=0.272 Sum_probs=413.2
Q ss_pred ccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEe
Q 008342 19 ALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLN 98 (569)
Q Consensus 19 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (569)
+.++.++|+++++++|+++|+++.++++||+||+++++++|+.|.+.|+++|++|++++++++++++++|||+++|++++
T Consensus 2002 ~~~~~~~~~~~a~~~p~~~A~~~~~~~lTy~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~~~~~lAil~aGa~~v 2081 (5163)
T PRK12316 2002 GPGVHQRIAEQAARAPEAIAVVFGDQHLSYAELDSRANRLAHRLRARGVGPEVRVAIAAERSFELVVALLAVLKAGGAYV 2081 (5163)
T ss_pred CCCHHHHHHHHHHhCCCCeEEEcCCCeEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhceEEe
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHhh
Q 008342 99 SINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEKF 178 (569)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (569)
|++|.++.+++.++++++++++++++.+....+... .....+.+... ..+.
T Consensus 2082 pld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~------------~~~~~~~~~~~---------------~~~~-- 2132 (5163)
T PRK12316 2082 PLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPLP------------AGVARLPLDRD---------------AEWA-- 2132 (5163)
T ss_pred ecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhcccc------------cccceEeccch---------------hhhh--
Confidence 999999999999999999999999987654322100 01111222110 0000
Q ss_pred hhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHHHHHH
Q 008342 179 LETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTWSLA 258 (569)
Q Consensus 179 l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~ 258 (569)
. .+.........++++++|+|||||||.||||+++|+++.+...+....++++++|+++...|++|..++...+.++
T Consensus 2133 --~-~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~L 2209 (5163)
T PRK12316 2133 --D-YPDTAPAVQLAGENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGERYELSPADCELQFMSFSFDGAHEQWFHPL 2209 (5163)
T ss_pred --c-cCccCCCCCCCCCCeEEEEeCccCCCCCCEeEEccHHHHHHHHHHHHhcCCCCcceEEEecCchHHHHHHHHHHHH
Confidence 0 0111111235678999999999999999999999999999999888899999999999999999998888888888
Q ss_pred HhcceEEEec--cCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhhc--C
Q 008342 259 ALCGTSICLR--QVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQK--G 334 (569)
Q Consensus 259 ~~g~~~~~~~--~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~--~ 334 (569)
+.|+++++.+ .+++..+++.|+++++|++.++|+++..+.+....... ..+||.+++|||++++++.++|.+. +
T Consensus 2210 ~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~--~~~lr~~~~gGe~l~~~~~~~~~~~~~~ 2287 (5163)
T PRK12316 2210 LNGARVLIRDDELWDPEQLYDEMERHGVTILDFPPVYLQQLAEHAERDGR--PPAVRVYCFGGEAVPAASLRLAWEALRP 2287 (5163)
T ss_pred hCCCEEEeCCcccCCHHHHHHHHHHcCCeEEEcChHHHHHHHhhhhcccC--CcceeEEEEecccCCHHHHHHHHHhCCC
Confidence 8888886654 36889999999999999999999999999876543322 4589999999999999999999853 7
Q ss_pred CeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccc
Q 008342 335 FRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMK 414 (569)
Q Consensus 335 ~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~ 414 (569)
.++++.||+||++..++....... ........++|.|++++ ++.|+|++ ++++|.| +.|||+|.|+++++
T Consensus 2288 ~~l~n~YG~TE~~~~~~~~~~~~~------~~~~~~~~~iG~p~~~~-~~~i~d~~-~~~vp~g--~~GEl~i~G~~v~~ 2357 (5163)
T PRK12316 2288 VYLFNGYGPTEAVVTPLLWKCRPQ------DPCGAAYVPIGRALGNR-RAYILDAD-LNLLAPG--MAGELYLGGEGLAR 2357 (5163)
T ss_pred cEEEECccchhheeeeeeeecccc------cccCCCcCCcccccCCC-EEEEECCC-CCCCCCC--CeeEEEecchhhcc
Confidence 899999999999866554322111 01111125799999999 69999986 8899988 89999999999999
Q ss_pred cccCCcchhhhhhc--------CCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEee
Q 008342 415 GYLKNPKANEEAFA--------NGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVAR 486 (569)
Q Consensus 415 gy~~~~~~~~~~~~--------~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~ 486 (569)
||+++++.+.+.|. .+||+|||+|++++||.++++||.||+||++|++|++.|||.+|.++|+|.+++|++.
T Consensus 2358 GY~~~p~~T~~~f~~~~~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rie~~eIE~~l~~~~~v~~a~v~~~ 2437 (5163)
T PRK12316 2358 GYLNRPGLTAERFVPDPFSASGERLYRTGDLARYRADGVVEYLGRIDHQVKIRGFRIELGEIEARLQAHPAVREAVVVAQ 2437 (5163)
T ss_pred cccCChhhhhhhccCCCCCCCCCeeEecccEEEEcCCCcEEEecCCCCeEEEcCccCChHHHHHHHhhCcccceEEEEEE
Confidence 99999999999983 3599999999999999999999999999999999999999999999999999999988
Q ss_pred cCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHH
Q 008342 487 PDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKA 556 (569)
Q Consensus 487 ~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~ 556 (569)
++. .++.++++++...+... ..+++++++++.||.|++|..+++.+ ||+|++||++|++|++..
T Consensus 2438 ~~~-~~~~l~a~v~~~~~~~~-----~~~~l~~~l~~~Lp~~~vP~~~~~l~~lP~t~~GKidR~~L~~~~ 2502 (5163)
T PRK12316 2438 DGA-SGKQLVAYVVPDDAAED-----LLAELRAWLAARLPAYMVPAHWVVLERLPLNPNGKLDRKALPKPD 2502 (5163)
T ss_pred ecC-CCeEEEEEEEecCCCcc-----CHHHHHHHHHhhCchhcCcceEeeecccCCCCCCccCHhhcCCCc
Confidence 766 67889999998766533 56889999999999999999998777 999999999999997654
No 98
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=1.8e-62 Score=489.48 Aligned_cols=522 Identities=21% Similarity=0.221 Sum_probs=419.6
Q ss_pred cccccCHHHHHHHhhhhCCCceeeeeCC--------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHH
Q 008342 16 NYTALTPLWFINRAATLHPTRKSVVYGS--------KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQ 87 (569)
Q Consensus 16 ~~~~~~l~~~l~~~a~~~p~~~a~~~~~--------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~ 87 (569)
.....|+++.+.+.+..+|+.+++-... ..+||.|..+++.+++..|.++|+++++.|+|+.-|+++|+++.
T Consensus 71 ~~~~~T~~~~f~~~~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~pEWiis~ 150 (691)
T KOG1256|consen 71 FDGPLTLYEGFRRSVEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNRPEWIISE 150 (691)
T ss_pred CCCcccHHHHhhcchhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCChhhHHhH
Confidence 3468899999999999999999986543 67999999999999999999999999999999999999999999
Q ss_pred HHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEccc-chHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHH
Q 008342 88 FGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQE-FFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEY 166 (569)
Q Consensus 88 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 166 (569)
+||...|.+.||+..+++++.+.++++.+...++|++++ ....+.+..... ....++.+|.+++....-+..+.
T Consensus 151 ~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~-----~~~~LK~iI~~~~~~~~~~~~~~ 225 (691)
T KOG1256|consen 151 MACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKEND-----SLPSLKAIIQLDEPSDELKEKAE 225 (691)
T ss_pred HHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccc-----cCccceeEEEecCCchhhhhhhh
Confidence 999999999999999999999999999999999999954 333333322210 01157888888887655444444
Q ss_pred hhhcchhhHHhhhhcCCCCCCCC-CCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhH------hCCCCCcEE
Q 008342 167 ALARGAIEYEKFLETGDPEFAWK-PPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALI------WGMNEGAVF 239 (569)
Q Consensus 167 ~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~------~~~~~~d~~ 239 (569)
.......+|+++++-+....... .++.++|.+.|.|||||||.||||++||+|+.......... ......|++
T Consensus 226 ~~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~ 305 (691)
T KOG1256|consen 226 NNGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVY 305 (691)
T ss_pred cCCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCceE
Confidence 45556899999998886554444 47899999999999999999999999999998865432221 123347999
Q ss_pred EEcCCccchhhHHHHHHHHHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCC----C-----------
Q 008342 240 LWTLPMFHGNGWSYTWSLAALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPE----D----------- 304 (569)
Q Consensus 240 ~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~----~----------- 304 (569)
++.+|+.|++...........|+++.+.. .|+..+.+.|++.+||++.++|.+|+++...... .
T Consensus 306 lSyLPLAHi~er~~~~~~~~~G~~IgF~~-gD~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A 384 (691)
T KOG1256|consen 306 LSYLPLAHIFERVVELYTFYIGAKIGFAR-GDILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFA 384 (691)
T ss_pred EEeCcHHHHHHHHHHHhHhhcccEEEEec-CChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 99999999999988888887888877776 5888888889999999999999999887644211 0
Q ss_pred --------------C-CCC--------------cccceeeeecCCCCCHHHHHHhhhc-CCeEecccccccCCCCccccc
Q 008342 305 --------------T-ILP--------------LTNVVNVNTAGAPPPPSLLFAMSQK-GFRITHTYGLTELTGPASVCA 354 (569)
Q Consensus 305 --------------~-~~~--------------l~~l~~~~~~g~~l~~~~~~~~~~~-~~~i~~~YG~tE~~~~~~~~~ 354 (569)
. ..+ -.++|.+++|++|+++++.+.++.. |++|+++||+||+.+.++...
T Consensus 385 ~~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g~~v~eGYGlTEts~g~~~~~ 464 (691)
T KOG1256|consen 385 MAYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALGCRVLEGYGLTETSAGTTLTL 464 (691)
T ss_pred HHHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcCceeeecccccccCCceEecc
Confidence 0 000 3478899999999999999999955 899999999999996666544
Q ss_pred cCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccccccCCcchhhhhh-cCCeee
Q 008342 355 WKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAF-ANGWFH 433 (569)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~ 433 (569)
..+. ..+++|.|+|++ +++++|.++-.--+.+ ..||||++|++++.||+++|+.|.+.+ .+||++
T Consensus 465 ~~d~-----------~lgsvG~p~p~~-~vKL~dvpe~ny~a~~--~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLh 530 (691)
T KOG1256|consen 465 PGDN-----------VLGSVGPPVPGN-EVKLVDVPEMNYDADG--SKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLH 530 (691)
T ss_pred CCCC-----------CCCCcCCcccCc-eEEEechHHhCcCcCC--CcceEEEecchhceeccCChHHHhhhhccccccc
Confidence 2221 348999999999 6999888866666666 469999999999999999999999999 799999
Q ss_pred cCceeEEcCCCeEEEecccCceEE-eCceeechHHHHHHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcchhh--h
Q 008342 434 SGDLAVKHPDNYIEIKDRLKDVII-SGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADELD--K 510 (569)
Q Consensus 434 tGD~~~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~--~ 510 (569)
|||+|+|+++|.+++.||.+++|| ..|++|.|..||++..+.+.|.+.+|.+..... .++++|++.++..... .
T Consensus 531 TGDiG~~~p~G~l~IidRkK~ifklaqGEyVaPe~IEniy~~~~~V~qi~V~g~s~~~---~LvaiVvpd~e~~~~~a~~ 607 (691)
T KOG1256|consen 531 TGDIGEWDPNGTLKIIDRKKNIFKLAQGEYVAPEKIENIYKRSLPVQQIFVLGDSLRS---FLVAIVVPDPEVLKSWAAK 607 (691)
T ss_pred cccceeECCCccEEEEecccceEEcCCCCccChHHHHHHHhcCCceEEEEEECCcchh---cEEEEEecChhhchhhHHH
Confidence 999999999999999999999999 789999999999999999999999999876543 5889888876543210 0
Q ss_pred -----------------hhHHHHHHHHHH-hcCCCCcCCceEEecc----CC---CCCCCcccHHHHHHHHHhcC
Q 008342 511 -----------------GKLAEDVSKFCR-AKMPSYWVPKSVVFAA----LP---KSATGKIQKHLLRAKAKEMG 560 (569)
Q Consensus 511 -----------------~~~~~~l~~~~~-~~l~~~~~p~~i~~~~----lP---~t~~GKi~r~~l~~~~~~~~ 560 (569)
+....++.++-+ +.+..+.....+.+.+ +. +||+=|+.|..|.+.|+++-
T Consensus 608 ~~~~~~~eelc~n~~~k~~vl~el~~~~~~~~l~~fe~vk~v~l~~~~FsienglltPTlK~KR~~l~~~yk~~I 682 (691)
T KOG1256|consen 608 DGVKGTFEELCRNLDVKEAVLSELVKVGKENGLKGFEQVKKVHLLPDPFSIENGLLTPTLKIKRPQLLKYYKKQI 682 (691)
T ss_pred ccCchhHHHHhcChhhHHHHHHHHHHHHhhhhccChhhEeeEEEecccccccCCccchhhhhhhHHHHHHHHHHH
Confidence 011122222222 1255566666666644 32 58999999999999998764
No 99
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=5.6e-62 Score=504.16 Aligned_cols=446 Identities=22% Similarity=0.302 Sum_probs=378.5
Q ss_pred HHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCH
Q 008342 27 NRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNA 106 (569)
Q Consensus 27 ~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~ 106 (569)
.++++++|+++|+.+.++.+||.||.++++++|.+|.+.|+++|++|+++++|+++++++++||+++|++++|+++..+.
T Consensus 10 ~~~a~~~~~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~ 89 (458)
T PRK09029 10 RHWAQVRPQAIALRLNDEVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARVLPLNPQLPQ 89 (458)
T ss_pred HHHHHhCCCceeeecCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEeecCCCCCH
Confidence 56688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHhhhhcCCCCC
Q 008342 107 TVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEKFLETGDPEF 186 (569)
Q Consensus 107 ~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 186 (569)
+++..+++++++++++++++... ... +. .. . .. ....
T Consensus 90 ~~~~~~~~~~~~~~~i~~~~~~~-~~~----~~----------~~-~---------------------~~----~~~~-- 126 (458)
T PRK09029 90 PLLEELLPSLTLDFALVLEGENT-FSA----LT----------SL-H---------------------LQ----LVEG-- 126 (458)
T ss_pred HHHHHHHHhcCCCEEEEcCcccc-hhh----cc----------cc-c---------------------cc----cccc--
Confidence 99999999999999998876432 100 00 00 0 00 0000
Q ss_pred CCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEE
Q 008342 187 AWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSIC 266 (569)
Q Consensus 187 ~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~ 266 (569)
.......++++++++|||||||.||+|.+||++++.........++..++|+++..+|++|.+|+...+..+..|+++++
T Consensus 127 ~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~l~~G~~v~~ 206 (458)
T PRK09029 127 AHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMPFTAQDSWLLSLPLFHVSGQGIVWRWLYAGATLVV 206 (458)
T ss_pred cCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCCCCccceEEEecCcHhhhhhHHHHHHHhCCceEEe
Confidence 00122456789999999999999999999999999988888888899999999999999999998766666667777666
Q ss_pred eccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhhcCCeEecccccccC
Q 008342 267 LRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQKGFRITHTYGLTEL 346 (569)
Q Consensus 267 ~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~~~~i~~~YG~tE~ 346 (569)
.+. ..+++.+. ++|.+..+|+++..+...... ..++|.+++||+++++.+.+.+.+.+.++++.||+||+
T Consensus 207 ~~~---~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~-----~~~l~~i~~gG~~~~~~~~~~~~~~g~~~~~~YG~tE~ 276 (458)
T PRK09029 207 RDK---QPLEQALA--GCTHASLVPTQLWRLLDNRSE-----PLSLKAVLLGGAAIPVELTEQAEQQGIRCWCGYGLTEM 276 (458)
T ss_pred CCh---HHHHHHHh--hceeeecChHHHHHHHhcccc-----CCcceEEEECCCCCCHHHHHHHHHcCCcEecccccccc
Confidence 543 45677774 799999999999998876543 34799999999999999999998889999999999999
Q ss_pred CCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccccccCCcchhhhh
Q 008342 347 TGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEA 426 (569)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~ 426 (569)
+...+.... ....++|.|++++ .+++.+ |||+++|+.++.||+++++.+...
T Consensus 277 ~~~~~~~~~-------------~~~~~~G~~~~~~-~~~i~~--------------gel~v~g~~~~~gY~~~~~~~~~~ 328 (458)
T PRK09029 277 ASTVCAKRA-------------DGLAGVGSPLPGR-EVKLVD--------------GEIWLRGASLALGYWRQGQLVPLV 328 (458)
T ss_pred CcceeccCC-------------CCCCCCCCCCCCC-EEEEeC--------------CEEEEecCceeeeeecCccccccc
Confidence 854432110 1125689999988 477753 899999999999999988877666
Q ss_pred hcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcc
Q 008342 427 FANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEAD 506 (569)
Q Consensus 427 ~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~ 506 (569)
..+|||+|||+|+++ +|.+++.||.||+|+++|.+|+|.+||+.|.++|.|.+++|++.+++..|+.++++++...+.
T Consensus 329 ~~~~~~~TGD~~~~~-~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~- 406 (458)
T PRK09029 329 NDEGWFATRDRGEWQ-NGELTILGRLDNLFFSGGEGIQPEEIERVINQHPLVQQVFVVPVADAEFGQRPVAVVESDSEA- 406 (458)
T ss_pred cCCCccCCCCcEEEe-CCEEEEecccccceeeCCEEeCHHHHHHHHhcCCCcceEEEEccCCcccCceEEEEEEcCccc-
Confidence 678999999999999 999999999999999999999999999999999999999999999999899999998876332
Q ss_pred hhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHhcCC
Q 008342 507 ELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKEMGP 561 (569)
Q Consensus 507 ~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~~ 561 (569)
..++|.++|+++|+.|++|..+.+.+ +|+|++||++|+.|++++.....
T Consensus 407 ------~~~~l~~~~~~~l~~~~~P~~~~~~~~~p~t~~gKi~r~~L~~~~~~~~~ 456 (458)
T PRK09029 407 ------AVVNLAEWLQDKLARFQQPVAYYLLPPELKNGGIKISRQALKEWVAQQLG 456 (458)
T ss_pred ------CHHHHHHHHHhhchhccCCeEEEEecccccCcCCCcCHHHHHHHHHhccC
Confidence 45789999999999999999999877 99999999999999999986543
No 100
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=4.8e-62 Score=500.35 Aligned_cols=431 Identities=18% Similarity=0.195 Sum_probs=356.5
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCC-CCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEE
Q 008342 44 KHYTWHQTYRRCRRFASALSKLSI-GLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVI 122 (569)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 122 (569)
.-+.|+||.++++++|++|.+.|+ ++|++|+++++|++++++++|||+++|++++|++|.++.+++.++++++++++++
T Consensus 18 ~~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i 97 (452)
T PRK07445 18 IGYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIW 97 (452)
T ss_pred eecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEE
Confidence 357899999999999999999988 5799999999999999999999999999999999999999999999999999999
Q ss_pred EcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHhhhhcCCCCCCCCCCCCcCceEEEEe
Q 008342 123 VDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEKFLETGDPEFAWKPPEDEWQSIALGY 202 (569)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~ 202 (569)
++.+..... .... .. ......++++++++|
T Consensus 98 ~~~~~~~~~----------------------~~~~-------------------------~~---~~~~~~~~~~~~i~~ 127 (452)
T PRK07445 98 GLDQLKLSH----------------------PPPL-------------------------PS---QGILPNLETGWIMIP 127 (452)
T ss_pred ecCcccccc----------------------CCCC-------------------------Cc---cccCCCCCCcEEEEe
Confidence 876532100 0000 00 001134578999999
Q ss_pred ccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEeccCChHHHHHHHHhc
Q 008342 203 TSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICLRQVTAKAVYTAIATH 282 (569)
Q Consensus 203 TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~ 282 (569)
||||||.||+|.+||+++..........+++.+ ++.++.+|++|.+|+...+.++..|+++++.+............++
T Consensus 128 TSGTTG~PKgV~~t~~~l~~~~~~~~~~~~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~ 206 (452)
T PRK07445 128 TGGSSGQIRFAIHTWETLTASVQGFQRYFQLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYKRLKSGQELPPNP 206 (452)
T ss_pred CCCCCCCCcEEEechHHHHHHHHHHHHHhcCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChHhccchhhhhhhc
Confidence 999999999999999999888877777777655 4678899999999998777777888888776533233333444578
Q ss_pred CccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhhcCCeEecccccccCCCCccccccCCCCCCC
Q 008342 283 GVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQKGFRITHTYGLTELTGPASVCAWKPEWDSL 362 (569)
Q Consensus 283 ~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~ 362 (569)
++|++.++|++++.+.+.. ... ++++|.+++||+++++++.+++.+.++++++.||+||+++.++.....
T Consensus 207 ~~t~~~~vP~~l~~l~~~~---~~~-l~~l~~i~~gG~~l~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~------ 276 (452)
T PRK07445 207 SDFFLSLVPTQLQRLLQLR---PQW-LAQFRTILLGGAPAWPSLLEQARQLQLRLAPTYGMTETASQIATLKPD------ 276 (452)
T ss_pred CceEEEehHHHHHHHHhhC---hhh-hhcceEEEECCccCCHHHHHHHHhcCCeEecCcchhhhcccccccCch------
Confidence 8999999999999998632 122 789999999999999999998887799999999999998654432211
Q ss_pred CchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccccccCCcchhhhhhcCCeeecCceeEEcC
Q 008342 363 PFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHP 442 (569)
Q Consensus 363 ~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~ 442 (569)
.......++|.|.+++ +++|+ .+ +.|||+++|++++.||+++... .+|||+|||+|++++
T Consensus 277 ---~~~~~~~~~G~~~p~~-~v~i~---------~g--~~Gel~v~g~~~~~gY~~~~~~-----~~g~~~TGDl~~~d~ 336 (452)
T PRK07445 277 ---DFLAGNNSSGQVLPHA-QITIP---------AN--QTGNITIQAQSLALGYYPQILD-----SQGIFETDDLGYLDA 336 (452)
T ss_pred ---hhccCCCcCCccCCCC-eEEEc---------CC--CcceEEEeCCccchhhcCCccC-----CCCEEECCCEEEEcC
Confidence 0011236789999998 58887 12 5799999999999999975431 378999999999999
Q ss_pred CCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHH
Q 008342 443 DNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCR 522 (569)
Q Consensus 443 ~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~ 522 (569)
||++++.||.||+|+++|++|+|.+||++|.+||.|.+|+|++.+++..|+.++++++..++.. ..++++++++
T Consensus 337 dG~l~~~GR~dd~I~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~~~~~~g~~~~a~vv~~~~~~------~~~~l~~~~~ 410 (452)
T PRK07445 337 QGYLHILGRNSQKIITGGENVYPAEVEAAILATGLVQDVCVLGLPDPHWGEVVTAIYVPKDPSI------SLEELKTAIK 410 (452)
T ss_pred CCCEEEEeecCCEEEECCEEECHHHHHHHHHhCCCcceEEEEeccCcCCCcEEEEEEEeCCCCC------CHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999988999999988765421 3578999999
Q ss_pred hcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHhcCC
Q 008342 523 AKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKEMGP 561 (569)
Q Consensus 523 ~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~~ 561 (569)
++|+.|++|..+.+++ ||+|++||++|++|++++.++..
T Consensus 411 ~~L~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~~ 450 (452)
T PRK07445 411 DQLSPFKQPKHWIPVPQLPRNPQGKINRQQLQQIAVQRLG 450 (452)
T ss_pred HhCCcccCCeEEEEecCCCCCCCcccCHHHHHHHHHHhhC
Confidence 9999999999998877 99999999999999999877543
No 101
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.2e-61 Score=505.65 Aligned_cols=494 Identities=26% Similarity=0.361 Sum_probs=402.4
Q ss_pred HHHhhhhCCCceeeee--CCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeecccc
Q 008342 26 INRAATLHPTRKSVVY--GSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIR 103 (569)
Q Consensus 26 l~~~a~~~p~~~a~~~--~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~ 103 (569)
.+.+++++|+++|+++ .++.+||.||.+++.++|++|.+.|+++|++|+++++|+++++++++||+++|++++++++.
T Consensus 3 ~~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~~~ 82 (511)
T PRK13391 3 PGIHAQTTPDKPAVIMASTGEVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVNSH 82 (511)
T ss_pred hhhhHhhCCCceEEEecCCCCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEeccccc
Confidence 3567889999999987 46889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHhhhhcCC
Q 008342 104 LNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEKFLETGD 183 (569)
Q Consensus 104 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 183 (569)
++.+.+.++++.++++.++++........+...... .....+.+.+.... .....+.+.+....
T Consensus 83 ~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~ 146 (511)
T PRK13391 83 LTPAEAAYIVDDSGARALITSAAKLDVARALLKQCP-------GVRHRLVLDGDGEL---------EGFVGYAEAVAGLP 146 (511)
T ss_pred cCHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCC-------CceEEEEecCCCCC---------cccccHHHHhcCCC
Confidence 999999999999999999999877655544433322 22333343321110 11223333332211
Q ss_pred CCCCCCCCCCcCceEEEEeccCCCCCCcceeec--chHHHH---HHHHhHhHhCCCCCcEEEEcCCccchhhHHHHHHHH
Q 008342 184 PEFAWKPPEDEWQSIALGYTSGTTASPKGVVVS--HRGAYL---MSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTWSLA 258 (569)
Q Consensus 184 ~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t--~~~~~~---~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~ 258 (569)
. ......++.+.++|||||||.||+|.++ |.+... ........+++.+++++++..|++|.+++...+..+
T Consensus 147 ~----~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~ 222 (511)
T PRK13391 147 A----TPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAPQRAVMLVI 222 (511)
T ss_pred C----CCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHHHHHHHHHH
Confidence 1 1112345678999999999999999964 555432 223344566788899999999999999988888888
Q ss_pred HhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCC--CCCCCcccceeeeecCCCCCHHHHHHhhh-cCC
Q 008342 259 ALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPE--DTILPLTNVVNVNTAGAPPPPSLLFAMSQ-KGF 335 (569)
Q Consensus 259 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~--~~~~~l~~l~~~~~~g~~l~~~~~~~~~~-~~~ 335 (569)
..|+++++.+.+++..+++.++++++|++.++|+++..+.+.... .... +++++.+++||+++++++.+++.+ +|.
T Consensus 223 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~-~~~l~~~~~gg~~~~~~~~~~~~~~~g~ 301 (511)
T PRK13391 223 RLGGTVIVMEHFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYD-LSSLEVAIHAAAPCPPQVKEQMIDWWGP 301 (511)
T ss_pred HcCceEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCC-ccceeEEEEccCCCCHHHHHHHHHHcCC
Confidence 889999888888999999999999999999999999988765432 1223 789999999999999999999885 488
Q ss_pred eEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCccccc
Q 008342 336 RITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKG 415 (569)
Q Consensus 336 ~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~g 415 (569)
.+++.||+||++++...... ......+++|.|.++. ++++|++ +++++.| +.|||+++|+ ++.|
T Consensus 302 ~v~~~YG~tE~~~~~~~~~~----------~~~~~~~~vG~~~~g~--~~i~d~~-~~~~~~g--~~Gel~~~g~-~~~g 365 (511)
T PRK13391 302 IIHEYYAATEGLGFTACDSE----------EWLAHPGTVGRAMFGD--LHILDDD-GAELPPG--EPGTIWFEGG-RPFE 365 (511)
T ss_pred ceeeeeccccccceEEecCc----------cccccCCCcCCcccce--EEEECCC-CCCCCCC--CceEEEEecC-cceE
Confidence 99999999999875433211 0112336889999883 8889875 8888877 7899999999 8899
Q ss_pred ccCCcchhhhhhc--CCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCCCCc
Q 008342 416 YLKNPKANEEAFA--NGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGE 493 (569)
Q Consensus 416 y~~~~~~~~~~~~--~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~ 493 (569)
|+++++.+...|. ++||+|||+|+++++|.+++.||.||+++++|.++++.+||++|.+||.|.+++|++.+++..|+
T Consensus 366 y~~~~~~~~~~~~~~~~w~~TGD~g~~~~~g~l~~~gR~~~~i~~~G~~v~~~eie~~l~~~~~v~~~~v~~~~~~~~g~ 445 (511)
T PRK13391 366 YLNDPAKTAEARHPDGTWSTVGDIGYVDEDGYLYLTDRAAFMIISGGVNIYPQEAENLLITHPKVADAAVFGVPNEDLGE 445 (511)
T ss_pred EcCChhHhHHhhccCCCEEecCCEEEECCCccEEEeccCCCEEEeCCEEECHHHHHHHHHhCCCcceEEEEecCCcccCc
Confidence 9999988888774 38999999999999999999999999999999999999999999999999999999999988888
Q ss_pred eeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHh
Q 008342 494 SPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKE 558 (569)
Q Consensus 494 ~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~ 558 (569)
.+.++++..++... .+...++++++++++++.|++|..+.+++ +|+|++||++|+.|++.+..
T Consensus 446 ~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~~ 509 (511)
T PRK13391 446 EVKAVVQPVDGVDP--GPALAAELIAFCRQRLSRQKCPRSIDFEDELPRLPTGKLYKRLLRDRYWG 509 (511)
T ss_pred eeEEEEEECCCCCc--ccchHHHHHHHHHhhcccCcCCcEEEEeecCCCCCccceeHHHHHHHhhc
Confidence 89998887664322 11255789999999999999999999776 99999999999999998764
No 102
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=3.4e-61 Score=505.39 Aligned_cols=492 Identities=26% Similarity=0.359 Sum_probs=400.1
Q ss_pred eeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcC
Q 008342 37 KSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHA 116 (569)
Q Consensus 37 ~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~ 116 (569)
.|++..++.+||.||.++++++|++|.+.|+++|++|+++++|+++++++++||+++|++++++++.++.+++.++++.+
T Consensus 3 ~~~~~~~~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~ 82 (509)
T PRK12406 3 ATIISGDRRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDS 82 (509)
T ss_pred eEEEECCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhcc
Confidence 46777889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhh-----HHhhhcchhhHHhhhhcCCCCCCCCCC
Q 008342 117 SSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQL-----EYALARGAIEYEKFLETGDPEFAWKPP 191 (569)
Q Consensus 117 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~~ 191 (569)
++++++++......+.... + ....++.+.......... ..........|++++...... ..
T Consensus 83 ~~~~i~~~~~~~~~~~~~~---~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 148 (509)
T PRK12406 83 GARVLIAHADLLHGLASAL---P-------AGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQEPY----DG 148 (509)
T ss_pred CCcEEEEccchhhhhhhhh---h-------cccceeecccccccccccccccccccCCCCccCHHHHhcccCcc----CC
Confidence 9999999887655443221 1 111122111110000000 000112334555554332211 12
Q ss_pred CCcCceEEEEeccCCCCCCcceeecchHH---HHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEec
Q 008342 192 EDEWQSIALGYTSGTTASPKGVVVSHRGA---YLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICLR 268 (569)
Q Consensus 192 ~~~~~~~~i~~TSGsTG~pk~v~~t~~~~---~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~ 268 (569)
...+++++++|||||||.||+|.++|.+. ..........+++.+++++++..|++|..+..+.+..+..|+++++.+
T Consensus 149 ~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~ 228 (509)
T PRK12406 149 PPVPQPQSMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQP 228 (509)
T ss_pred CCCCCceEEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEcc
Confidence 34679999999999999999999876653 333344455678899999999999999988877777777888888878
Q ss_pred cCChHHHHHHHHhcCccEEeehHHHHHHHHccCCC--CCCCCcccceeeeecCCCCCHHHHHHhhhc-CCeEeccccccc
Q 008342 269 QVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPE--DTILPLTNVVNVNTAGAPPPPSLLFAMSQK-GFRITHTYGLTE 345 (569)
Q Consensus 269 ~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~--~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~-~~~i~~~YG~tE 345 (569)
.+++..+++.++++++|++.++|+++..++..... .... +++++.+++||+++++++.+++.+. ++.+++.||+||
T Consensus 229 ~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~-~~~l~~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE 307 (509)
T PRK12406 229 RFDPEELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYD-VSSLRHVIHAAAPCPADVKRAMIEWWGPVIYEYYGSTE 307 (509)
T ss_pred CCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccCC-CCceeEEEEcCCCCCHHHHHHHHHHcCCcEEeeccccc
Confidence 88999999999999999999999999999875432 2223 7899999999999999999999864 899999999999
Q ss_pred CCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccc-cccCCcchhh
Q 008342 346 LTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMK-GYLKNPKANE 424 (569)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~-gy~~~~~~~~ 424 (569)
++.+++.+... .....+++|.|.+++ .++++|+. +++++.+ +.|||+++++.++. +|++++..+.
T Consensus 308 ~~~~~~~~~~~----------~~~~~~~~G~~~~~~-~~~i~d~~-~~~~~~g--~~Gel~v~~~~~~~~~y~~~~~~~~ 373 (509)
T PRK12406 308 SGAVTFATSED----------ALSHPGTVGKAAPGA-ELRFVDED-GRPLPQG--EIGEIYSRIAGNPDFTYHNKPEKRA 373 (509)
T ss_pred cCceEecCccc----------ccccCCCcCccCCCc-EEEEECCC-CCCCCCC--CceEEEEECCccccccccCCchhcc
Confidence 98755443211 112236789999999 59999975 8888887 78999999998775 8999998888
Q ss_pred hhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCCCCceeeEEEEecCC
Q 008342 425 EAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPE 504 (569)
Q Consensus 425 ~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~ 504 (569)
..+.++||+|||+++++++|.+++.||.||+++++|.+|++.+||++|.++|.|.++++++.++...++.+.+++++.+.
T Consensus 374 ~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~ik~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~ 453 (509)
T PRK12406 374 EIDRGGFITSGDVGYLDADGYLFLCDRKRDMVISGGVNIYPAEIEAVLHAVPGVHDCAVFGIPDAEFGEALMAVVEPQPG 453 (509)
T ss_pred cccCCCCeEEccEEEEcCCceEEEeecccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeeeccccCceeEEEEEECCC
Confidence 88889999999999999999999999999999999999999999999999999999999999888878889999988765
Q ss_pred cchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHhcCCc
Q 008342 505 ADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKEMGPV 562 (569)
Q Consensus 505 ~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~~~ 562 (569)
... ..+++.+++++.+++|++|..+.+.+ ||+|++||++|++|++.+.....+
T Consensus 454 ~~~-----~~~~l~~~l~~~l~~~~~P~~i~~~~~iP~t~~GK~~r~~L~~~~~~~~~~ 507 (509)
T PRK12406 454 ATL-----DEADIRAQLKARLAGYKVPKHIEIMAELPREDSGKIFKRRLRDPYWANAGR 507 (509)
T ss_pred CCC-----CHHHHHHHHHHhcccCCCCcEEEEeccCCCCCccchhHHHHHHHHHhhccc
Confidence 432 45789999999999999999998776 999999999999999988876554
No 103
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.2e-62 Score=612.91 Aligned_cols=493 Identities=20% Similarity=0.266 Sum_probs=415.0
Q ss_pred ccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEe
Q 008342 19 ALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLN 98 (569)
Q Consensus 19 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (569)
..+++++|++++.++|+++|+++.+.++||+||+++++++|+.|.+.|+++|++|++++++++++++++||++++|++++
T Consensus 3719 ~~~~~~~~~~~~~~~p~~~Av~~~~~~~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v~~lavlkaG~a~v 3798 (4334)
T PRK05691 3719 EQSYVRLFEAQVAAHPQRIAASCLDQQWSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLDLLGMIVGSFKAGAGYL 3798 (4334)
T ss_pred ccCHHHHHHHHHHhCCCceEEEcCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEe
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHhh
Q 008342 99 SINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEKF 178 (569)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (569)
|++|.++.+++.++++++++++++++.............+... ....++..++.
T Consensus 3799 pld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~--------------------- 3852 (4334)
T PRK05691 3799 PLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCA-----NRPRLLVWEEV--------------------- 3852 (4334)
T ss_pred CCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccc-----cccceeeeccc---------------------
Confidence 9999999999999999999999999987655443332222100 11112221111
Q ss_pred hhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHHHHHH
Q 008342 179 LETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTWSLA 258 (569)
Q Consensus 179 l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~ 258 (569)
...............+++.++|+|||||||.||||+++|+++.+...+....++++++|+++...++++..+++..+.++
T Consensus 3853 ~~~~~~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~s~~fd~s~~~~~~~l 3932 (4334)
T PRK05691 3853 QAGEVASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYLALSEADVIAQTASQSFDISVWQFLAAP 3932 (4334)
T ss_pred ccccccccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhcCCCccceEEEecCCchhHHHHHHHHHH
Confidence 00011111112234678999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HhcceEEEecc---CChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhhc--
Q 008342 259 ALCGTSICLRQ---VTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQK-- 333 (569)
Q Consensus 259 ~~g~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~-- 333 (569)
+.|+++++++. .++..+++.++++++|++.++|+++..++..... .+++||.+++|||++++++.++|.+.
T Consensus 3933 ~~G~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~~~----~~~~lr~~~~gGe~l~~~~~~~~~~~~~ 4008 (4334)
T PRK05691 3933 LFGARVEIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAEDRQ----ALDGLRWMLPTGEAMPPELARQWLQRYP 4008 (4334)
T ss_pred hCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhccc----cCCCceEEEecCCcCCHHHHHHHHHhCC
Confidence 99999988853 5789999999999999999999999988754322 27889999999999999999999754
Q ss_pred CCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCccc
Q 008342 334 GFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVM 413 (569)
Q Consensus 334 ~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~ 413 (569)
+++++|.||+||++..++....... ........+|.|++++ ++.|+|.. ++++|.| ..|||+|.|+.++
T Consensus 4009 ~~~l~n~YG~TE~t~~~~~~~~~~~-------~~~~~~~~iG~p~~~~-~~~v~d~~-~~~~p~g--~~GEL~i~G~~v~ 4077 (4334)
T PRK05691 4009 QIGLVNAYGPAECSDDVAFFRVDLA-------STRGSYLPIGSPTDNN-RLYLLDEA-LELVPLG--AVGELCVAGTGVG 4077 (4334)
T ss_pred CCeEEeCccCccceeEEEEEEcccc-------cccCCcCCCCCccCCC-EEEEECCC-CCCCCCC--CceEEEEeccccc
Confidence 8899999999999876654432211 1111235699999999 69999976 8999998 8999999999999
Q ss_pred ccccCCcchhhhhhc--------CCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEe
Q 008342 414 KGYLKNPKANEEAFA--------NGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVA 485 (569)
Q Consensus 414 ~gy~~~~~~~~~~~~--------~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~ 485 (569)
+||+++++.+.++|. ++||+|||++++++||.++++||.|++||++|.+|.+.|||..|.++|+|.+++|+.
T Consensus 4078 ~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~riel~eIE~~l~~~~~v~~a~v~~ 4157 (4334)
T PRK05691 4078 RGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRSDGVLEYVGRIDHQVKIRGYRIELGEIEARLHEQAEVREAAVAV 4157 (4334)
T ss_pred ccccCCcccchhhcccCCCCCCCceeeccCcceeecCCCcEEEecccCCcEEeceEEecHHHHHHHHHhCCCccEEEEEE
Confidence 999999999999983 469999999999999999999999999999999999999999999999999988876
Q ss_pred ecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHH
Q 008342 486 RPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAK 555 (569)
Q Consensus 486 ~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~ 555 (569)
... ..++.+++|++....... .....++|++++++.||.|++|+.+++++ ||+|++||+||++|++.
T Consensus 4158 ~~~-~~~~~l~a~~~~~~~~~~--~~~~~~~l~~~l~~~Lp~ymvP~~~~~~~~lP~t~~GKidr~~L~~~ 4225 (4334)
T PRK05691 4158 QEG-VNGKHLVGYLVPHQTVLA--QGALLERIKQRLRAELPDYMVPLHWLWLDRLPLNANGKLDRKALPAL 4225 (4334)
T ss_pred ecC-CCCcEEEEEEeCCccccc--chHHHHHHHHHHHhhCChhhcCcceeecccCCCCCCCcccHhhcCCC
Confidence 543 446788999887655322 12256789999999999999999998766 99999999999999865
No 104
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=2.2e-61 Score=503.79 Aligned_cols=459 Identities=17% Similarity=0.195 Sum_probs=346.6
Q ss_pred cCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccc------hHHHHHHHHHHhhhcCCCCCcCe
Q 008342 77 APNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEF------FSLAEEALKMMEANSEGKLKTPH 150 (569)
Q Consensus 77 ~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 150 (569)
++|++++++++|||+++|++++|+++.++.+++.++++.++++++|+++.. .+.+....... .. .
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~--------~~-~ 71 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAA--------PA-K 71 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcc--------cc-e
Confidence 589999999999999999999999999999999999999999999998642 12222211111 11 2
Q ss_pred EEEecCCCcchhhhHHhhhcchhhHHhhhhcCCC------CCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHH
Q 008342 151 LIVIGDESCDSKQLEYALARGAIEYEKFLETGDP------EFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMS 224 (569)
Q Consensus 151 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~ 224 (569)
.+.+........ . ........|.+++..... .........++++++|+|||||||.||+|.+||.+++...
T Consensus 72 ~i~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~ 148 (499)
T PLN03051 72 AIVLPAAGEPVA-V--PLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCA 148 (499)
T ss_pred EEEEeccCcccC-C--ccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHH
Confidence 222221100000 0 000112346665532110 0111111356899999999999999999999999988766
Q ss_pred HHhHhHhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEec-cCChHHHHHHHHhcCccEEeehHHHHHHHHccCC-
Q 008342 225 LNGALIWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICLR-QVTAKAVYTAIATHGVTHFCAAPVVLNAIANASP- 302 (569)
Q Consensus 225 ~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~- 302 (569)
......+++.++|++++.+|++|.+++...+.++..|+++++.. .+++..+++.|+++++|++.++|+++..|++...
T Consensus 149 ~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~ 228 (499)
T PLN03051 149 SDGWAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAF 228 (499)
T ss_pred HHHHHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCcc
Confidence 65556678889999999999999999876666677788887776 4788999999999999999999999999887543
Q ss_pred -CCCCCCcccceeeeecCCCCCHHHHHHhhh-c--CCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCcee
Q 008342 303 -EDTILPLTNVVNVNTAGAPPPPSLLFAMSQ-K--GFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRT 378 (569)
Q Consensus 303 -~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~-~--~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 378 (569)
....+ +++||.+++||++++++..+++++ . ++++++.||+||+++.+...... .....+++|.|.
T Consensus 229 ~~~~~~-~~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~----------~~~~~~~~G~p~ 297 (499)
T PLN03051 229 AMEGLD-WSKLRVFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTLL----------QPQAPGAFSTAS 297 (499)
T ss_pred ccccCC-chhheEEEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeeccccc----------CCCCCccccCCC
Confidence 22233 789999999999999999887776 3 47899999999987543321110 011236899999
Q ss_pred eccCCceeeeCCCCcccCCCCCceEEEEEecCcc--cccccCCcchhhhhhcCC----------eeecCceeEEcCCCeE
Q 008342 379 ICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCV--MKGYLKNPKANEEAFANG----------WFHSGDLAVKHPDNYI 446 (569)
Q Consensus 379 ~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~--~~gy~~~~~~~~~~~~~g----------~~~tGD~~~~~~~g~l 446 (569)
+++ +++|+|++ +++++.|.++.|||+++|+.+ +.||++++ .+ ..+.+| ||+|||+|++|+||++
T Consensus 298 ~~~-~~~ivd~~-g~~~~~g~~~~Gel~v~g~~~~~~~gy~~~~-~~-~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l 373 (499)
T PLN03051 298 LGT-RFVLLNDN-GVPYPDDQPCVGEVALAPPMLGASDRLLNAD-HD-KVYYKGMPMYGSKGMPLRRHGDIMKRTPGGYF 373 (499)
T ss_pred CCc-eEEEECCC-CCCCCCCCCcceEEEEecCcCCCCccccCCc-cc-ceeeecCCccccCCcceeecCCeEEECCCCcE
Confidence 999 69999975 888888744589999999976 57999754 22 233344 7999999999999999
Q ss_pred EEecccCceEEeCceeechHHHHHHHhc-CCCceeeEEEeecCCCCC-ceeeEEE---EecCCcchhhhhhHHHHHHHHH
Q 008342 447 EIKDRLKDVIISGGENISSVEVEKVLYL-HPLVLEAAVVARPDERWG-ESPCAFV---TLKPEADELDKGKLAEDVSKFC 521 (569)
Q Consensus 447 ~~~GR~~d~i~~~G~~v~~~~iE~~l~~-~~~v~~~~v~~~~~~~~g-~~~~~~v---~~~~~~~~~~~~~~~~~l~~~~ 521 (569)
+|.||.||+|+++|++|+|.|||++|.+ ||.|.+++|++.+++..| +.++++| ++.++....+.++..+.+++++
T Consensus 374 ~~~gR~~d~ik~~G~~v~p~EIE~~l~~~~p~V~~aavvg~~d~~~g~~~~~a~v~~~v~~~~~~~~~~~~l~~~~~~~l 453 (499)
T PLN03051 374 CVQGRADDTMNLGGIKTSSVEIERACDRAVAGIAETAAVGVAPPDGGPELLVIFLVLGEEKKGFDQARPEALQKKFQEAI 453 (499)
T ss_pred EEEeccCCEEeeCCEECCHHHHHHHHHhcCCCcceEEEEEecCCCCCceEEEEEEEcceecccccccchHHHHHHHHHHH
Confidence 9999999999999999999999999986 999999999999999888 6788888 6665431122223445566666
Q ss_pred HhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHhcCCc
Q 008342 522 RAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKEMGPV 562 (569)
Q Consensus 522 ~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~~~ 562 (569)
+++|+.+..|..+.+++ ||+|++||++|++|++.+.+....
T Consensus 454 ~~~l~~~~~~~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~~~ 495 (499)
T PLN03051 454 QTNLNPLFKVSRVKIVPELPRNASNKLLRRVLRDQLKKELSG 495 (499)
T ss_pred HhhcCCccCCceEEEcCCCCCCCCccHHHHHHHHHHHHhhcc
Confidence 77788766666777777 999999999999999988766553
No 105
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.6e-61 Score=531.72 Aligned_cols=492 Identities=17% Similarity=0.165 Sum_probs=379.2
Q ss_pred ccccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCce
Q 008342 17 YTALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAV 96 (569)
Q Consensus 17 ~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 96 (569)
.+.+++.++|+++++++|+++|+++.++++||+||+++++++|++|.+.|+++||+|+|+++|++++++++|||+++|++
T Consensus 444 ~~~~sl~~ll~~~a~~~pd~~Al~~~~~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aGav 523 (994)
T PRK07868 444 HTRISLGRIIAEQARDAPKGEFLLFDGRVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAV 523 (994)
T ss_pred CCCccHHHHHHHHHHHCCCCeEEEeCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCE
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHH
Q 008342 97 LNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYE 176 (569)
Q Consensus 97 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 176 (569)
++|++|. .++.++++.++++++|++.+....+.. . ...+++++......... ........++
T Consensus 524 ~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~----~---------~~~iiv~~~~~~~~~~~--~~~~~~~~~~ 585 (994)
T PRK07868 524 AVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQ----L---------PGRVLVLGGGESRDLDL--PDDADVIDME 585 (994)
T ss_pred EEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHh----c---------CceEEEecCCccccccC--Ccchhhhhhh
Confidence 9999985 678999999999999998765543321 1 23455554321100000 0000111222
Q ss_pred hhhhcCCCCCCCC--CCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHH
Q 008342 177 KFLETGDPEFAWK--PPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYT 254 (569)
Q Consensus 177 ~~l~~~~~~~~~~--~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~ 254 (569)
++........... .+..++++++|+|| ||||.||++.++|.+...........+++.++|++++.+|++|.+++...
T Consensus 586 ~~~~~~~~~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~l~~~d~~L~~~Pl~h~~gl~~~ 664 (994)
T PRK07868 586 KIDPDAVELPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAAALDRRDTVYCLTPLHHESGLLVS 664 (994)
T ss_pred hcCcccccCCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcCCCCCCeEEEecChHHHhHHHHH
Confidence 2111100000100 11235789999998 57888888888887766555555556788999999999999999999887
Q ss_pred HHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhhc
Q 008342 255 WSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQK 333 (569)
Q Consensus 255 ~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~ 333 (569)
+..++.+|+.+++ +.+++..+++.|+++++|++.++|+++..|++........ ++++|.++ |+.+++++.+++.+.
T Consensus 665 l~~~l~gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~-~~slr~~~--g~gl~~~l~~~~~~~ 741 (994)
T PRK07868 665 LGGAVVGGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHG-NHPVRLFI--GSGMPTGLWERVVEA 741 (994)
T ss_pred HHHHhccceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCC-CCceEEEe--cCCCCHHHHHHHHHH
Confidence 7777787776665 5689999999999999999999999999998764333223 67889766 334999999998854
Q ss_pred -C-CeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceee--e--------CCCC--cccCCCC
Q 008342 334 -G-FRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVI--D--------ARTN--QPVPADG 399 (569)
Q Consensus 334 -~-~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~--d--------~~~~--~~~~~~~ 399 (569)
+ +++++.||+||++...... + ....+++|.|++++.+++|. | .+.| +.++.|
T Consensus 742 ~~~~~l~~~YG~TE~~~~~~~~---~----------~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~g- 807 (994)
T PRK07868 742 FAPAHVVEFFATTDGQAVLANV---S----------GAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEVN- 807 (994)
T ss_pred hCchheeeeeeccccccccccc---C----------CCCCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCCC-
Confidence 4 8999999999986533211 0 11347899999997435543 2 1234 445555
Q ss_pred CceEEEEEecCcccccccCCcchhh--hhh--cCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcC
Q 008342 400 KTIGEIVMRGSCVMKGYLKNPKANE--EAF--ANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLH 475 (569)
Q Consensus 400 ~~~Gel~v~~~~~~~gy~~~~~~~~--~~~--~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 475 (569)
+.|||+++++.. + ++..+. ..| .+|||+|||+|++|+||+|+|+||.||+||++|.+|+|.|||++|.+|
T Consensus 808 -e~Gel~~~~~~~----~-~p~~t~~~~~~~~~dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~EIE~~L~~h 881 (994)
T PRK07868 808 -EVGVLLARARGP----I-DPTASVKRGVFAPADTWISTEYLFRRDDDGDYWLVDRRGSVIRTARGPVYTEPVTDALGRI 881 (994)
T ss_pred -CceEEEEecCCC----C-ChhhhhHhcccccCCEEEeccceEEEcCCCCEEEeccCCCEEEeCCceEcHHHHHHHHhcC
Confidence 789999998753 2 232221 123 378999999999999999999999999999999999999999999999
Q ss_pred CCceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHH
Q 008342 476 PLVLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRA 554 (569)
Q Consensus 476 ~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~ 554 (569)
|.|.+|+|++.+++. ++.++++|++.++... ..++|+++|++ ++.|++|..+++++ ||+|++||++|++|++
T Consensus 882 p~V~~aaVvg~~d~~-~~~~~a~Vv~~~~~~~-----~~~~L~~~l~~-l~~y~vP~~i~~v~~lP~T~sGKi~r~~L~~ 954 (994)
T PRK07868 882 GGVDLAVTYGVEVGG-RQLAVAAVTLRPGAAI-----TAADLTEALAS-LPVGLGPDIVHVVPEIPLSATYRPTVSALRA 954 (994)
T ss_pred CCeeEEEEEeecCCC-CceEEEEEEeCCCCcC-----CHHHHHHHHHh-CCCCcCCeEEEEeCCCCCCccccEehHHHHh
Confidence 999999999998875 6788999988766433 45789999986 99999999999887 9999999999999986
Q ss_pred HHH
Q 008342 555 KAK 557 (569)
Q Consensus 555 ~~~ 557 (569)
...
T Consensus 955 ~~l 957 (994)
T PRK07868 955 AGI 957 (994)
T ss_pred cCC
Confidence 644
No 106
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2e-60 Score=498.98 Aligned_cols=485 Identities=26% Similarity=0.355 Sum_probs=396.2
Q ss_pred eeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcC
Q 008342 37 KSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHA 116 (569)
Q Consensus 37 ~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~ 116 (569)
.++.+.++.+||.||.+++.++|++|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++.+
T Consensus 3 ~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~ 82 (502)
T PRK08276 3 VIMAPSGEVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDS 82 (502)
T ss_pred eEecCCCcEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcC
Confidence 45667789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHhhhhcCCCCCCCCCCCCcCc
Q 008342 117 SSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEKFLETGDPEFAWKPPEDEWQ 196 (569)
Q Consensus 117 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 196 (569)
+++++|+++.......+....... ....++...... .....|++........ .....++
T Consensus 83 ~~~~ii~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~----~~~~~~~ 141 (502)
T PRK08276 83 GAKVLIVSAALADTAAELAAELPA------GVPLLLVVAGPV-----------PGFRSYEEALAAQPDT----PIADETA 141 (502)
T ss_pred CCCEEEEccchhhHHHHHhhhccc------cccEEEEeCCCC-----------CccccHHHHHhcCCCC----CCCCCCc
Confidence 999999998776655544332210 122333332110 1223444444332211 1234567
Q ss_pred eEEEEeccCCCCCCcceeecchHHHHHH------HHhHhHhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEeccC
Q 008342 197 SIALGYTSGTTASPKGVVVSHRGAYLMS------LNGALIWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICLRQV 270 (569)
Q Consensus 197 ~~~i~~TSGsTG~pk~v~~t~~~~~~~~------~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~~ 270 (569)
.++++|||||||.||+|.++|.++.... ...........++++++..|++|.+++...+.....|+++++.+.+
T Consensus 142 ~a~i~~TSGtTG~PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~ 221 (502)
T PRK08276 142 GADMLYSSGTTGRPKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVMEKF 221 (502)
T ss_pred ceEEEECCCCCCCCceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcCCC
Confidence 8999999999999999999987754322 1111122234778999999999999988877777788888777888
Q ss_pred ChHHHHHHHHhcCccEEeehHHHHHHHHccCCCC--CCCCcccceeeeecCCCCCHHHHHHhhhc-CCeEecccccccCC
Q 008342 271 TAKAVYTAIATHGVTHFCAAPVVLNAIANASPED--TILPLTNVVNVNTAGAPPPPSLLFAMSQK-GFRITHTYGLTELT 347 (569)
Q Consensus 271 ~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~--~~~~l~~l~~~~~~g~~l~~~~~~~~~~~-~~~i~~~YG~tE~~ 347 (569)
++..+++.++++++|++.++|+++..+++..... ..+ ++++|.++++|+++++++.+++.+. +..+++.||+||++
T Consensus 222 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~-~~~lr~i~~~g~~~~~~~~~~~~~~~~~~~~~~yG~tE~~ 300 (502)
T PRK08276 222 DAEEALALIERYRVTHSQLVPTMFVRMLKLPEEVRARYD-VSSLRVAIHAAAPCPVEVKRAMIDWWGPIIHEYYASSEGG 300 (502)
T ss_pred CHHHHHHHHHHhCCeEEEehHHHHHHHHhCccccCCCCC-cccceEEEecCCCCCHHHHHHHHHHhCcHhhhhccccccc
Confidence 9999999999999999999999999998765322 223 7899999999999999999999854 88899999999998
Q ss_pred CCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccccccCCcchhhhhh
Q 008342 348 GPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAF 427 (569)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~ 427 (569)
++++..... .....+++|.|+ ++ .++++|++ +.+++.| +.|||+++|++++.||++++..+...+
T Consensus 301 ~~~~~~~~~----------~~~~~~~~G~~~-~~-~~~i~d~~-~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~ 365 (502)
T PRK08276 301 GVTVITSED----------WLAHPGSVGKAV-LG-EVRILDED-GNELPPG--EIGTVYFEMDGYPFEYHNDPEKTAAAR 365 (502)
T ss_pred ceeEecCcc----------ccccCCCcceec-cc-EEEEECCC-CCCCcCC--CceEEEEECCCccchhcCCHHHHHHHh
Confidence 755443210 112236789999 77 69999865 7888877 789999999999999999999998888
Q ss_pred cC-CeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcc
Q 008342 428 AN-GWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEAD 506 (569)
Q Consensus 428 ~~-g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~ 506 (569)
.+ +||+|||+++++++|.+++.||.||+++++|.++++.+||.+|.++|.|.++++++..++..++.+.++++..++..
T Consensus 366 ~~~~~~~TGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~iE~~i~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~ 445 (502)
T PRK08276 366 NPHGWVTVGDVGYLDEDGYLYLTDRKSDMIISGGVNIYPQEIENLLVTHPKVADVAVFGVPDEEMGERVKAVVQPADGAD 445 (502)
T ss_pred cCCCceeecceEEEcCCcCEEEeccCcceEEeCCEEeCHHHHHHHHHhCCCcceEEEEeCCCcccCceEEEEEEECCCCC
Confidence 65 99999999999999999999999999999999999999999999999999999999999888999999999876543
Q ss_pred hhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHhcC
Q 008342 507 ELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKEMG 560 (569)
Q Consensus 507 ~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~ 560 (569)
. .....+.+.++++++++.+++|..+++++ ||+|++||++|++|++.+.+..
T Consensus 446 ~--~~~~~~~i~~~~~~~l~~~~~p~~i~~~~~lP~t~~GKi~r~~L~~~~~~~~ 498 (502)
T PRK08276 446 A--GDALAAELIAWLRGRLAHYKCPRSIDFEDELPRTPTGKLYKRRLRDRYWEGR 498 (502)
T ss_pred C--ChhhHHHHHHHHHhhccCCCCCcEEEEecCCCCCcccchhHHHHHHHHHhhh
Confidence 2 11245689999999999999999999777 9999999999999999987654
No 107
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.3e-61 Score=603.91 Aligned_cols=484 Identities=19% Similarity=0.239 Sum_probs=410.4
Q ss_pred ccccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCce
Q 008342 17 YTALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAV 96 (569)
Q Consensus 17 ~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 96 (569)
....++.++|+++++.+|+++|+++.++++||+||.++++++|++|.+.|+++|++|++++++++++++++|||+++|++
T Consensus 1128 ~~~~~l~~~~~~~a~~~p~~~Al~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~s~~~iv~~lailkaG~~ 1207 (4334)
T PRK05691 1128 PAQAWLPELLNEQARQTPERIALVWDGGSLDYAELHAQANRLAHYLRDKGVGPDVCVAIAAERSPQLLVGLLAILKAGGA 1207 (4334)
T ss_pred CccCCHHHHHHHHHHhCCCCeEEEECCceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCE
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHH
Q 008342 97 LNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYE 176 (569)
Q Consensus 97 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 176 (569)
++|++|.++.+++.+++++++++++|++......+... .....+.++... ..
T Consensus 1208 ~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~------------~~~~~~~~~~~~----------------~~ 1259 (4334)
T PRK05691 1208 YVPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQA------------EGVSAIALDSLH----------------LD 1259 (4334)
T ss_pred EEecCcCChHHHHHHHHHhcCCCEEEecchhhhhcccc------------cCceEEeecccc----------------cc
Confidence 99999999999999999999999999987654322110 011122222110 00
Q ss_pred hhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHHHH
Q 008342 177 KFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTWS 256 (569)
Q Consensus 177 ~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~ 256 (569)
..+.........++++++++|||||||.||||.++|+++.....+....++++++|+++...|++|..++...+.
T Consensus 1260 -----~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~s~~~~~~ 1334 (4334)
T PRK05691 1260 -----SWPSQAPGLHLHGDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATYALDDSDVLMQKAPISFDVSVWECFW 1334 (4334)
T ss_pred -----ccCCCCCCCCCCCCCeEEEEEcCCCCCCCceeEeecHHHHHHHHHHHHhcCCCCCCEEEEeCCccHHHHHHHHHH
Confidence 000111112245689999999999999999999999999999888888899999999999999999999888888
Q ss_pred HHHhcceEEEec---cCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhhc
Q 008342 257 LAALCGTSICLR---QVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQK 333 (569)
Q Consensus 257 ~~~~g~~~~~~~---~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~ 333 (569)
+++.|+++++.+ ..++..+++.++++++|++.++|++++.+.+.... .. ++++|.+++||+++++++.++|.+.
T Consensus 1335 ~L~~G~~l~i~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~~--~~-~~~lr~~~~gGe~l~~~~~~~~~~~ 1411 (4334)
T PRK05691 1335 PLITGCRLVLAGPGEHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPLA--AA-CTSLRRLFSGGEALPAELRNRVLQR 1411 (4334)
T ss_pred HHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhCccc--cc-CCcccEEEEeecCCCHHHHHHHHHh
Confidence 888899888874 36889999999999999999999999999865332 22 7899999999999999999998854
Q ss_pred --CCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCc
Q 008342 334 --GFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSC 411 (569)
Q Consensus 334 --~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~ 411 (569)
+++++|.||+||++..++...... ......++|.|++++ .++|+|++ ++++|.| +.|||+|.|++
T Consensus 1412 ~~~~~l~n~YG~TE~~~~~~~~~~~~---------~~~~~~~iG~p~~~~-~~~i~d~~-~~~vp~G--~~GEL~i~G~~ 1478 (4334)
T PRK05691 1412 LPQVQLHNRYGPTETAINVTHWQCQA---------EDGERSPIGRPLGNV-LCRVLDAE-LNLLPPG--VAGELCIGGAG 1478 (4334)
T ss_pred CCCcEEEeCCCcChheeeeeeeeccc---------ccCCCCcccceeCCC-EEEEECCC-CCCCCCC--CceEEEecCcc
Confidence 789999999999986655432111 011236799999999 69999976 8999988 89999999999
Q ss_pred ccccccCCcchhhhhhcC--------CeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEE
Q 008342 412 VMKGYLKNPKANEEAFAN--------GWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAV 483 (569)
Q Consensus 412 ~~~gy~~~~~~~~~~~~~--------g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v 483 (569)
+++||+++++.+.+.|.. +||+|||+|++++||.++++||.||+||++|++|.|.|||.+|.++|+|.+++|
T Consensus 1479 v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~d~qiki~G~rie~~eIE~~l~~~~~V~~a~v 1558 (4334)
T PRK05691 1479 LARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNADGALEYLGRLDQQVKLRGFRVEPEEIQARLLAQPGVAQAAV 1558 (4334)
T ss_pred cchhhcCCccccHhhCCCCCCCCCCceEEEccceEEECCCCCEEEecccCcEEEECCEEcCHHHHHHHHHhCCCcceEEE
Confidence 999999999999998832 499999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHH
Q 008342 484 VARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAK 555 (569)
Q Consensus 484 ~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~ 555 (569)
++.++.. ++.++++++...+... ..++|+++++++||.|++|..+++.+ ||+|++||++|++|++.
T Consensus 1559 ~~~~~~~-~~~lva~~~~~~~~~~-----~~~~l~~~l~~~Lp~y~vP~~~~~~~~lP~t~~GKidr~~L~~~ 1625 (4334)
T PRK05691 1559 LVREGAA-GAQLVGYYTGEAGQEA-----EAERLKAALAAELPEYMVPAQLIRLDQMPLGPSGKLDRRALPEP 1625 (4334)
T ss_pred EEeeCCC-CCEEEEEEEeCCCCCC-----CHHHHHHHHHHhCccccCCcEEEEccccCCCCCCCcChhhcCcc
Confidence 8765543 5788999887665433 45689999999999999999999777 99999999999999764
No 108
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=2.6e-60 Score=543.60 Aligned_cols=497 Identities=21% Similarity=0.207 Sum_probs=394.3
Q ss_pred ccCHHHHHHHhhhhCC-Cceeeee-CCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCce
Q 008342 19 ALTPLWFINRAATLHP-TRKSVVY-GSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAV 96 (569)
Q Consensus 19 ~~~l~~~l~~~a~~~p-~~~a~~~-~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 96 (569)
+.++.+.+++.++++| ++.++.+ .++++||+||+++++++|++|.+ |+++||+|+++++|+++++++++||+++|++
T Consensus 630 ~~~~~~~l~~~~~~~~~~~~ai~~~~~~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v 708 (1140)
T PRK06814 630 DRTLFEALIEAAKIHGFKKLAVEDPVNGPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVTFFALQSAGRV 708 (1140)
T ss_pred cCCHHHHHHHHHHHcCCCCeEeECCCCCccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHHHHHHHHCCCE
Confidence 5678888999888886 5677776 36899999999999999999975 9999999999999999999999999999999
Q ss_pred EeeccccCCHHHHHHHHhcCCceEEEEcccchHHH--HHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhh
Q 008342 97 LNSINIRLNATVVAFILSHASSAVVIVDQEFFSLA--EEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIE 174 (569)
Q Consensus 97 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 174 (569)
++++++.++.+++.+++++++++++|++++..... ......+. ....++.+++..... .....
T Consensus 709 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-------~~~~~i~~~~~~~~~--------~~~~~ 773 (1140)
T PRK06814 709 PAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALE-------FGIRIIYLEDVRAQI--------GLADK 773 (1140)
T ss_pred EEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhc-------cCceEEEehHhhccC--------ChHHH
Confidence 99999999999999999999999999987654322 11111111 223445544321100 00011
Q ss_pred HHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHH-
Q 008342 175 YEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSY- 253 (569)
Q Consensus 175 ~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~- 253 (569)
+.+......+... .....++++++++|||||||.||+|.+||+++..........++++++|++++.+|++|.+++..
T Consensus 774 ~~~~~~~~~~~~~-~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~ 852 (1140)
T PRK06814 774 IKGLLAGRFPLVY-FCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARIDFSPEDKVFNALPVFHSFGLTGG 852 (1140)
T ss_pred HHHHhhccCCccc-cCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhCCCCcCEEEEecchHHHHHHHHH
Confidence 1122211111111 11346789999999999999999999999999988888888889999999999999999999854
Q ss_pred HHHHHHhcceEEEecc-CChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhh
Q 008342 254 TWSLAALCGTSICLRQ-VTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQ 332 (569)
Q Consensus 254 ~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~ 332 (569)
.+..+..|+++++.+. .+...+.+.++++++|++.++|++++.+.+... ..+ ++++|.+++||+++++++.+.+.+
T Consensus 853 ~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~--~~~-~~~lr~v~~gg~~l~~~~~~~~~~ 929 (1140)
T PRK06814 853 LVLPLLSGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYAH--PYD-FRSLRYVFAGAEKVKEETRQTWME 929 (1140)
T ss_pred HHHHHHcCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhcc--ccc-ccceeEEEEcCCcCCHHHHHHHHH
Confidence 4444556666666643 566788999999999999999999998876532 223 789999999999999999999884
Q ss_pred -cCCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCc
Q 008342 333 -KGFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSC 411 (569)
Q Consensus 333 -~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~ 411 (569)
.++++++.||+||+++.+..+... ....+++|.|.+++ ++++.+.+ + .+ +.|||+++|++
T Consensus 930 ~~~~~~~~~YG~TE~~~~~~~~~~~-----------~~~~~~vG~p~~g~-~~~~~~~~-~----~~--~~Gel~v~g~~ 990 (1140)
T PRK06814 930 KFGIRILEGYGVTETAPVIALNTPM-----------HNKAGTVGRLLPGI-EYRLEPVP-G----ID--EGGRLFVRGPN 990 (1140)
T ss_pred HhCCcEEeccccccccceEEecCCC-----------CCCCCcCCccCCCC-eEEEeecC-C----CC--CceEEEEeCCC
Confidence 489999999999998765443211 12246899999999 58887654 2 12 57999999999
Q ss_pred ccccccCCcchhh-hhhcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCC
Q 008342 412 VMKGYLKNPKANE-EAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDER 490 (569)
Q Consensus 412 ~~~gy~~~~~~~~-~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~ 490 (569)
++.||+++++... ....+|||+|||++++|+||.+++.||.||+|+++|++|+|.+||++|.+++.+.+++|++.+++.
T Consensus 991 ~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~ 1070 (1140)
T PRK06814 991 VMLGYLRAENPGVLEPPADGWYDTGDIVTIDEEGFITIKGRAKRFAKIAGEMISLAAVEELAAELWPDALHAAVSIPDAR 1070 (1140)
T ss_pred cchhhcCCCCCCccccCCCCeEecCCEEEECCCCeEEEEecccCeeeeCCEEECHHHHHHHHHhcCCcccEEEEEcccCC
Confidence 9999998764332 223689999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCceeeEEEEecCCcchhhhhhHHHHHHHHHHhc-CCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHhcCCc
Q 008342 491 WGESPCAFVTLKPEADELDKGKLAEDVSKFCRAK-MPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKEMGPV 562 (569)
Q Consensus 491 ~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~-l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~~~ 562 (569)
.|+.+++++. ..+ . ..+++.+++++. ++.|++|..+.+++ ||+|++||++|++|++++.+....
T Consensus 1071 ~g~~~~~~~~-~~~--~-----~~~~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~~~ 1136 (1140)
T PRK06814 1071 KGERIILLTT-ASD--A-----TRAAFLAHAKAAGASELMVPAEIITIDEIPLLGTGKIDYVAVTKLAEEAAAK 1136 (1140)
T ss_pred CCceEEEEEc-CCC--c-----CHHHHHHHHHHcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHHHhhcc
Confidence 8888776654 211 1 346788888864 99999999998777 999999999999999998876443
No 109
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.6e-60 Score=510.33 Aligned_cols=501 Identities=17% Similarity=0.151 Sum_probs=373.2
Q ss_pred ccccCHHHHHHHhhhhCCCceeeeeCC------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHh
Q 008342 17 YTALTPLWFINRAATLHPTRKSVVYGS------KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGA 90 (569)
Q Consensus 17 ~~~~~l~~~l~~~a~~~p~~~a~~~~~------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~ 90 (569)
....++.++|+++++++|+++|+++.+ +++||+||.++++++|++|.+.|+++||+|+++++|++++++++|||
T Consensus 46 ~~~~~l~~~l~~~a~~~pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~ 125 (624)
T PRK12582 46 PYPRSIPHLLAKWAAEAPDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMTLAA 125 (624)
T ss_pred CcccCHHHHHHHHHHHCCCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHH
Confidence 346789999999999999999998754 68999999999999999999999999999999999999999999999
Q ss_pred hhcCceEeeccccCCH-----HHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhH
Q 008342 91 PMAGAVLNSINIRLNA-----TVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLE 165 (569)
Q Consensus 91 ~~~G~~~v~l~~~~~~-----~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 165 (569)
+++|++++|++|.++. +++.++++.++++++|+++... .......+.. ....++.+......
T Consensus 126 ~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~--~~~~~~~~~~------~~~~~i~~~~~~~~----- 192 (624)
T PRK12582 126 MQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAP--FARALAALDL------LDVTVVHVTGPGEG----- 192 (624)
T ss_pred HHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHH--HHHHHHhhhh------cCceEEEEcCCCcc-----
Confidence 9999999999999885 8999999999999999986421 1111111110 01223444322110
Q ss_pred HhhhcchhhHHhhhhcCCCCC--CCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCC---CcEEE
Q 008342 166 YALARGAIEYEKFLETGDPEF--AWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNE---GAVFL 240 (569)
Q Consensus 166 ~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~---~d~~~ 240 (569)
.....+.++........ .......++++++|+|||||||.||+|.+||+++..........+.... .++++
T Consensus 193 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~l 268 (624)
T PRK12582 193 ----IASIAFADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRPREPDPPPPVSL 268 (624)
T ss_pred ----cccccHHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhccccCCCCCceEE
Confidence 11234555443322110 0112245689999999999999999999999999887766555444443 57999
Q ss_pred EcCCccchhhHHHHHHHH-HhcceEEEec-cCCh---HHHHHHHHhcCccEEeehHHHHHHHHccCCCCC---CCCcccc
Q 008342 241 WTLPMFHGNGWSYTWSLA-ALCGTSICLR-QVTA---KAVYTAIATHGVTHFCAAPVVLNAIANASPEDT---ILPLTNV 312 (569)
Q Consensus 241 ~~~p~~~~~g~~~~~~~~-~~g~~~~~~~-~~~~---~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~---~~~l~~l 312 (569)
..+|++|.+|+...+... ..|+++++.+ .+.+ .++++.++++++|++.++|.++..|.+...... ...++++
T Consensus 269 ~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~sl 348 (624)
T PRK12582 269 DWMPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSFFKNL 348 (624)
T ss_pred EechHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHHhhhe
Confidence 999999999987665554 4555555543 2333 456777899999999999999998876432211 0116789
Q ss_pred eeeeecCCCCCHHHHHHhhhc-------CCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCce
Q 008342 313 VNVNTAGAPPPPSLLFAMSQK-------GFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLD 385 (569)
Q Consensus 313 ~~~~~~g~~l~~~~~~~~~~~-------~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 385 (569)
|.+++||+++++++.+++.+. ++++++.||+||+++++...... ....+++|.|.+++ +++
T Consensus 349 r~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~-----------~~~~~svG~p~pg~-~v~ 416 (624)
T PRK12582 349 RLMAYGGATLSDDLYERMQALAVRTTGHRIPFYTGYGATETAPTTTGTHWD-----------TERVGLIGLPLPGV-ELK 416 (624)
T ss_pred eEEEecCCCCCHHHHHHHHHHHHhhcCCCceEEeccccccccceeecccCC-----------CCCCCCCCcCCCCc-EEE
Confidence 999999999999999998863 36899999999998655422110 12347899999999 588
Q ss_pred eeeCCCCcccCCCCCceEEEEEecCcccccccCCcchhhhhh-cCCeeecCceeEE-c---CCCeEEEecccCceEE-eC
Q 008342 386 VIDARTNQPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAF-ANGWFHSGDLAVK-H---PDNYIEIKDRLKDVII-SG 459 (569)
Q Consensus 386 i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~tGD~~~~-~---~~g~l~~~GR~~d~i~-~~ 459 (569)
+++ .| +.|||+++|++++.|||++++.+.+.| .+|||+|||+|++ + ++|++++.||.||+|+ .+
T Consensus 417 i~~--------~G--~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~ 486 (624)
T PRK12582 417 LAP--------VG--DKYEVRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLST 486 (624)
T ss_pred Ecc--------CC--CceEEEEECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhhEecCC
Confidence 753 23 689999999999999999999998888 5899999999998 4 4689999999999999 68
Q ss_pred ceeechHHHH--HHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCc----------c---hhhhhhHHHHH---HHHH
Q 008342 460 GENISSVEVE--KVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEA----------D---ELDKGKLAEDV---SKFC 521 (569)
Q Consensus 460 G~~v~~~~iE--~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~----------~---~~~~~~~~~~l---~~~~ 521 (569)
|++|+|.+|| .++.+||.|.+++|++.+++..| ++|++.... . ..+.++..+.+ .+..
T Consensus 487 G~~i~p~~iE~e~~l~~~p~V~~a~VvG~~~~~~g----~lv~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 562 (624)
T PRK12582 487 GTWVSVGTLRPDAVAACSPVIHDAVVAGQDRAFIG----LLAWPNPAACRQLAGDPDAAPEDVVKHPAVLAILREGLSAH 562 (624)
T ss_pred CcEechHHHHHHHHHhcCcchheEEEEcCCCCcEE----EEEecCHHHHHHHHhcCCCCHHHHhcCHHHHHHHHHHHHHH
Confidence 9999998885 68889999999999999877644 333322111 0 00111122222 2233
Q ss_pred HhcCCCCc-CCceEEecc-CC------CCCCCcccHHHHHHHHHhcC
Q 008342 522 RAKMPSYW-VPKSVVFAA-LP------KSATGKIQKHLLRAKAKEMG 560 (569)
Q Consensus 522 ~~~l~~~~-~p~~i~~~~-lP------~t~~GKi~r~~l~~~~~~~~ 560 (569)
++.++.+. +|..+.+.+ +| +|++||+.|+.+.+.|.++-
T Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~~R~~~~~~y~~~i 609 (624)
T PRK12582 563 NAEAGGSSSRIARALLMTEPPSIDAGEITDKGYINQRAVLERRAALV 609 (624)
T ss_pred HhhcCCChhheEEEEEeCCCCCccCCcCCccccccHHHHHHHHHHHH
Confidence 44466776 999888766 65 57888999999988888653
No 110
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.6e-60 Score=502.12 Aligned_cols=507 Identities=21% Similarity=0.267 Sum_probs=372.6
Q ss_pred cCHHHHHHHhhhhCCCceeeeeCC---------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHh
Q 008342 20 LTPLWFINRAATLHPTRKSVVYGS---------KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGA 90 (569)
Q Consensus 20 ~~l~~~l~~~a~~~p~~~a~~~~~---------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~ 90 (569)
|++.++|++++..+|+++|+++.+ +++||+||.+++.++|++|.+.| .+||+|+++++|++++++++|||
T Consensus 1 ~s~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~lA~ 79 (578)
T PRK05850 1 SSVPSLLRERASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFLGA 79 (578)
T ss_pred CcHHHHHHHHHhcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHHHH
Confidence 578899999999999999998643 78999999999999999999999 68999999999999999999999
Q ss_pred hhcCceEeeccc---cCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHh
Q 008342 91 PMAGAVLNSINI---RLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYA 167 (569)
Q Consensus 91 ~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 167 (569)
+++|++++|+++ ..+.+++.++|+++++++++++++..+.+........ ......++.++...
T Consensus 80 ~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~--------- 145 (578)
T PRK05850 80 LQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQP-----GQSAPPVIEVDLLD--------- 145 (578)
T ss_pred HHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcc-----cccccceEeecccc---------
Confidence 999999999997 4578999999999999999999876655543221111 00111222221110
Q ss_pred hhcchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHh-C-----CCCCcEEEE
Q 008342 168 LARGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIW-G-----MNEGAVFLW 241 (569)
Q Consensus 168 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~-~-----~~~~d~~~~ 241 (569)
+.... ........++++++++|||||||.||+|.++|.+++.........+ . ...++++++
T Consensus 146 ----------~~~~~---~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 212 (578)
T PRK05850 146 ----------LDSPR---GSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVS 212 (578)
T ss_pred ----------cccCC---ccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEE
Confidence 00000 0011224568999999999999999999999999988766554332 2 356889999
Q ss_pred cCCccchhhHHHH-HHHHHhcceEEEecc----CChHHHHHHHHhcCccEEeehHHHH-HHHHccCCC---CCCCCcccc
Q 008342 242 TLPMFHGNGWSYT-WSLAALCGTSICLRQ----VTAKAVYTAIATHGVTHFCAAPVVL-NAIANASPE---DTILPLTNV 312 (569)
Q Consensus 242 ~~p~~~~~g~~~~-~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~P~~~-~~l~~~~~~---~~~~~l~~l 312 (569)
.+|++|..|+... +.+++.|+++++... .++..+++.+++++++.+ .+|.++ ..+...... .... ++++
T Consensus 213 ~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~-~~~l 290 (578)
T PRK05850 213 WLPFYHDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMAGLD-LGGV 290 (578)
T ss_pred ECCCCCCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhcCcc-hhhh
Confidence 9999999998654 444556666666653 268999999999999865 556544 333322111 1122 6789
Q ss_pred eeeeecCCCCCHHHHHHhhhc----C---CeEecccccccCCCCccccccCCCCCC--CCchhh------------hhcc
Q 008342 313 VNVNTAGAPPPPSLLFAMSQK----G---FRITHTYGLTELTGPASVCAWKPEWDS--LPFETQ------------ARLN 371 (569)
Q Consensus 313 ~~~~~~g~~l~~~~~~~~~~~----~---~~i~~~YG~tE~~~~~~~~~~~~~~~~--~~~~~~------------~~~~ 371 (569)
|.+++||+++++++.+++.+. + ..+++.||+||++..+........... ...... ....
T Consensus 291 r~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~ 370 (578)
T PRK05850 291 LGIISGSERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPL 370 (578)
T ss_pred eeEEECcCCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceE
Confidence 999999999999998887642 3 369999999998754433211100000 000000 0011
Q ss_pred ccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccccccCCcchhhhhhc------------CCeeecCceeE
Q 008342 372 ARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAFA------------NGWFHSGDLAV 439 (569)
Q Consensus 372 ~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~------------~g~~~tGD~~~ 439 (569)
.+.|.|. +. +++++|++++.+++.| +.|||+++|++++.||+++++.+.+.|. ++||+|||+|+
T Consensus 371 ~~~g~p~-~~-~~~ivd~~~~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~ 446 (578)
T PRK05850 371 VSYGSPR-SP-TVRIVDPDTCIECPAG--TVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGF 446 (578)
T ss_pred EeccCCC-CC-EEEEEcCCCCcCCCCC--CEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceee
Confidence 1234433 34 5889998878889887 8999999999999999999999998883 47999999999
Q ss_pred EcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcchhh-hhhHHHHHH
Q 008342 440 KHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADELD-KGKLAEDVS 518 (569)
Q Consensus 440 ~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~-~~~~~~~l~ 518 (569)
++ +|+++++||.+|+|+++|++|+|.+||++|.+||.+ +++|++.++. .++.+++++++.++..... .......+.
T Consensus 447 ~~-~G~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~~-~~~v~~v~~~-~~~~~~a~v~~~~~~~~~~~~~~~~~~l~ 523 (578)
T PRK05850 447 IS-EGELFIVGRIKDLLIVDGRNHYPDDIEATIQEITGG-RVAAISVPDD-GTEKLVAIIELKKRGDSDEEAMDRLRTVK 523 (578)
T ss_pred EE-CCEEEEEcccccEEEECCeecCHHHHHHHHHHhcCC-cEEEEEecCC-CceEEEEEEEeccccCcchhhhhhHHHHH
Confidence 98 999999999999999999999999999999999985 4778888876 6788999998876543211 111234555
Q ss_pred HHHHhcCCC--CcCCceEEec---cCCCCCCCcccHHHHHHHHHhcCCcc
Q 008342 519 KFCRAKMPS--YWVPKSVVFA---ALPKSATGKIQKHLLRAKAKEMGPVK 563 (569)
Q Consensus 519 ~~~~~~l~~--~~~p~~i~~~---~lP~t~~GKi~r~~l~~~~~~~~~~~ 563 (569)
+.+...++. ...|..+.++ .||+|++||++|++|++.|.+....+
T Consensus 524 ~~v~~~l~~~~~~~~~~~~~~~~~~iP~t~~GKi~R~~l~~~~~~~~~~~ 573 (578)
T PRK05850 524 REVTSAISKSHGLSVADLVLVAPGSIPITTSGKIRRAACVEQYRQDEFTR 573 (578)
T ss_pred HHHHHHHHHHhCCCceEEEEeCCCCcCCCCCchHHHHHHHHHHHcCCccc
Confidence 555554432 2345555543 39999999999999999998876544
No 111
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=1e-59 Score=484.98 Aligned_cols=435 Identities=26% Similarity=0.386 Sum_probs=365.1
Q ss_pred eHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEccc
Q 008342 47 TWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQE 126 (569)
Q Consensus 47 Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 126 (569)
||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++++++++.++.+.+..++++++++.+++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred chHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCC
Q 008342 127 FFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGT 206 (569)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGs 206 (569)
...... .. ..+..+................+++++++|||||
T Consensus 81 ~~~~~~-----------------~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGt 122 (436)
T TIGR01923 81 LEEKDF-----------------QA---------------------DSLDRIEAAGRYETSLSASFNMDQIATLMFTSGT 122 (436)
T ss_pred ccccce-----------------ee---------------------cchHhhhhcccccccccccCCcCceEEEEeCCCC
Confidence 321000 00 0001111111111111123456789999999999
Q ss_pred CCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEeccCChHHHHHHHHhcCccE
Q 008342 207 TASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICLRQVTAKAVYTAIATHGVTH 286 (569)
Q Consensus 207 TG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~ 286 (569)
||.||+|.++|+++..........++++++|++++.+|++|.+++...+..+..|+++++.+.+ ..+++.++++++|+
T Consensus 123 TG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~--~~~~~~l~~~~~t~ 200 (436)
T TIGR01923 123 TGKPKAVPHTFRNHYASAVGSKENLGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF--NQLLEMIANERVTH 200 (436)
T ss_pred CCCCcEEEEehHHHHHHHHHHHhhcCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH--HHHHHHHHHhCCeE
Confidence 9999999999999998888888888999999999999999999998777777788887777554 38999999999999
Q ss_pred EeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhhcCCeEecccccccCCCCccccccCCCCCCCCchh
Q 008342 287 FCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQKGFRITHTYGLTELTGPASVCAWKPEWDSLPFET 366 (569)
Q Consensus 287 l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~ 366 (569)
+.++|+++..+.+.... .+++|.++++|+++++++.+++.+.++++++.||+||+++.++.+....
T Consensus 201 ~~~~P~~l~~l~~~~~~-----~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~--------- 266 (436)
T TIGR01923 201 ISLVPTQLNRLLDEGGH-----NENLRKILLGGSAIPAPLIEEAQQYGLPIYLSYGMTETCSQVTTATPEM--------- 266 (436)
T ss_pred EEeHHHHHHHHHhCcCC-----CCceEEEEECCCCCCHHHHHHHHHhCCceeeEecCCccchhccCcCccc---------
Confidence 99999999999876542 2679999999999999999998888999999999999987655432111
Q ss_pred hhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccccccCCcchhhhhhcCCeeecCceeEEcCCCeE
Q 008342 367 QARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYI 446 (569)
Q Consensus 367 ~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l 446 (569)
.....++|.|.+++ ++.+.+++.+ +.|||+++|+.++.||++++..+...+.+|||+|||++++++||.+
T Consensus 267 -~~~~~~~G~~~~~~-~~~i~~~~~~--------~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~ 336 (436)
T TIGR01923 267 -LHARPDVGRPLAGR-EIKIKVDNKE--------GHGEIMVKGANLMKGYLYQGELTPAFEQQGWFNTGDIGELDGEGFL 336 (436)
T ss_pred -cccccCCCccCCCc-EEEEEeCCCC--------CceEEEEECCccchhhCCChhhhhhhhcCCCeeccceEEEcCCCCE
Confidence 01113489999988 5877443321 4699999999999999998888877778899999999999999999
Q ss_pred EEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCC
Q 008342 447 EIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMP 526 (569)
Q Consensus 447 ~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~ 526 (569)
++.||.||+++++|.++++.+||++|.+++.|.+++|++.++...++.+.++++..++. ..+.+.+++++.++
T Consensus 337 ~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~-------~~~~l~~~l~~~l~ 409 (436)
T TIGR01923 337 YVLGRRDDLIISGGENIYPEEIETVLYQHPGIQEAVVVPKPDAEWGQVPVAYIVSESDI-------SQAKLIAYLTEKLA 409 (436)
T ss_pred EEeccccCeEEeCCEeeCHHHHHHHHHhCCCeeEEEEeCCcchhcCCeeEEEEEECCCC-------CHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999998887788888888877642 34688899999999
Q ss_pred CCcCCceEEecc-CCCCCCCcccHHHH
Q 008342 527 SYWVPKSVVFAA-LPKSATGKIQKHLL 552 (569)
Q Consensus 527 ~~~~p~~i~~~~-lP~t~~GKi~r~~l 552 (569)
.+++|..+.+++ ||+|++||++|++|
T Consensus 410 ~~~~p~~i~~~~~iP~t~~GK~~r~~L 436 (436)
T TIGR01923 410 KYKVPIAFEKLDELPYNASGKILRNQL 436 (436)
T ss_pred CCCCCeEEEEecCCCCCCCCceecccC
Confidence 999999998776 99999999999865
No 112
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.8e-59 Score=497.35 Aligned_cols=500 Identities=21% Similarity=0.240 Sum_probs=384.6
Q ss_pred ccCHHHHHHHhhhhCCCceeeeeCC---eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCc
Q 008342 19 ALTPLWFINRAATLHPTRKSVVYGS---KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGA 95 (569)
Q Consensus 19 ~~~l~~~l~~~a~~~p~~~a~~~~~---~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 95 (569)
-.++.++|+..++.+|+.+++...+ +.+||.||++++.++|++|.+.|+++||+|+++++|++++++++|||+++|+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~ 99 (579)
T PRK09192 20 FPTLVEALDYAALGEAGMNFYDRRGQLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEAFFACQYAGL 99 (579)
T ss_pred hhhHHHHHHHhhccCCceEEEecCCCEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHHHHHHHcCC
Confidence 4589999999999998777654333 6799999999999999999999999999999999999999999999999999
Q ss_pred eEeeccccCC-------HHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhh
Q 008342 96 VLNSINIRLN-------ATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYAL 168 (569)
Q Consensus 96 ~~v~l~~~~~-------~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 168 (569)
+++++++..+ .+++.++++.++++++|+++.....+....... ...+.
T Consensus 100 ~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~----------~~~~~--------------- 154 (579)
T PRK09192 100 VPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGN----------PLLHV--------------- 154 (579)
T ss_pred eeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhccc----------cccce---------------
Confidence 9999986443 588999999999999999987655444332111 00011
Q ss_pred hcchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHh-HhCCCCCcEEEEcCCccc
Q 008342 169 ARGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGAL-IWGMNEGAVFLWTLPMFH 247 (569)
Q Consensus 169 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~-~~~~~~~d~~~~~~p~~~ 247 (569)
..+.++........ ......++++++++|||||||.||+|.++|++++........ .+++.++|+++..+|++|
T Consensus 155 ----~~~~~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h 229 (579)
T PRK09192 155 ----LSHAWFKALPEADV-ALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLKVRPGDRCVSWLPFYH 229 (579)
T ss_pred ----eehhhhcccCCCcc-ccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcccCCCCCeEEEeCCCCC
Confidence 11222221111111 112245688999999999999999999999999988877776 788999999999999999
Q ss_pred hhhHHHHHHHHHh-cceEEEecc----CChHHHHHHHHhcCccEEeehHHHHHHHHccCCC---CCCCCcccceeeeecC
Q 008342 248 GNGWSYTWSLAAL-CGTSICLRQ----VTAKAVYTAIATHGVTHFCAAPVVLNAIANASPE---DTILPLTNVVNVNTAG 319 (569)
Q Consensus 248 ~~g~~~~~~~~~~-g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~---~~~~~l~~l~~~~~~g 319 (569)
.+|+...+...+. |+++++... .++..+++.+.+++++++...|..+..+...... .... ++++|.+++||
T Consensus 230 ~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~-l~~lr~~~~gG 308 (579)
T PRK09192 230 DMGLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELD-LSCWRVAGIGA 308 (579)
T ss_pred cchhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccc-hhhhheeEecC
Confidence 9998866665444 455544432 3688999999999999887766655555433211 1123 78999999999
Q ss_pred CCCCHHHHHHhhhc----C---CeEecccccccCCCCccccccCCCCCC------------CC-----chhhhhccccCC
Q 008342 320 APPPPSLLFAMSQK----G---FRITHTYGLTELTGPASVCAWKPEWDS------------LP-----FETQARLNARQG 375 (569)
Q Consensus 320 ~~l~~~~~~~~~~~----~---~~i~~~YG~tE~~~~~~~~~~~~~~~~------------~~-----~~~~~~~~~~~G 375 (569)
+++++.+.+.+.+. + ..+++.||+||+++.++.......... .. .........++|
T Consensus 309 ~~l~~~~~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG 388 (579)
T PRK09192 309 DMIRPDVLHQFAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCG 388 (579)
T ss_pred ccCCHHHHHHHHHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecC
Confidence 99999999888743 2 349999999999865554322111000 00 000011135789
Q ss_pred ceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccccccCCcchhhhhh-cCCeeecCceeEEcCCCeEEEecccCc
Q 008342 376 VRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAF-ANGWFHSGDLAVKHPDNYIEIKDRLKD 454 (569)
Q Consensus 376 ~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~tGD~~~~~~~g~l~~~GR~~d 454 (569)
.+.++. +++|+|++ +..++.+ +.|||+++|++++.||++++ .+...+ .+|||+|||+|++ ++|+++++||.||
T Consensus 389 ~~~p~~-~v~i~d~~-~~~~~~g--~~Gel~i~g~~~~~gY~~~~-~~~~~~~~dgw~~TGDlg~~-~~G~l~~~GR~dd 462 (579)
T PRK09192 389 KALPGH-EIEIRNEA-GMPLPER--VVGHICVRGPSLMSGYFRDE-ESQDVLAADGWLDTGDLGYL-LDGYLYITGRAKD 462 (579)
T ss_pred CcCCCc-EEEEECCC-CCCCCCC--CEEEEEecCCchhhhhcCCc-cccccccCCceeeccceeeE-ECCEEEEEecccc
Confidence 999999 69999976 7888877 79999999999999999984 444444 6899999999999 8999999999999
Q ss_pred eEEeCceeechHHHHHHHhcCCCce--eeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCC-CCcCC
Q 008342 455 VIISGGENISSVEVEKVLYLHPLVL--EAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMP-SYWVP 531 (569)
Q Consensus 455 ~i~~~G~~v~~~~iE~~l~~~~~v~--~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~-~~~~p 531 (569)
+|+++|.+|+|.+||++|++||.|. +++|++.+++. ++.++++++..+.... ..++|.+++++.+. .+++|
T Consensus 463 ~i~~~G~~v~p~eIE~~l~~~p~V~~~~~~v~~~~~~~-~~~~~~~v~~~~~~~~-----~~~~l~~~~~~~l~~~~~~~ 536 (579)
T PRK09192 463 LIIINGRNIWPQDIEWIAEQEPELRSGDAAAFSIAQEN-GEKIVLLVQCRISDEE-----RRGQLIHALAALVRSEFGVE 536 (579)
T ss_pred EEEECCCccCHHHHHHHHHhcCCccCCcEEEEEeccCC-CeeEEEEEEecCCChH-----HHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999998 89999988875 5577777776554322 45677888887764 57788
Q ss_pred ceEEec---cCCCCCCCcccHHHHHHHHHhcCC
Q 008342 532 KSVVFA---ALPKSATGKIQKHLLRAKAKEMGP 561 (569)
Q Consensus 532 ~~i~~~---~lP~t~~GKi~r~~l~~~~~~~~~ 561 (569)
..+.+. +||+|++||++|++|++++.....
T Consensus 537 ~~i~~~~~~~lP~t~~GKv~R~~l~~~~~~~~~ 569 (579)
T PRK09192 537 AAVELVPPHSLPRTSSGKLSRAKAKKRYLSGAF 569 (579)
T ss_pred ceEEEeCCCCcCCCCCcchhHHHHHHHHHcCCC
Confidence 776654 399999999999999999987655
No 113
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=3.4e-59 Score=444.69 Aligned_cols=520 Identities=21% Similarity=0.263 Sum_probs=425.9
Q ss_pred ccCHHHHHHHhhhhCCCceeeeeCC-----------------------eeeeHHHHHHHHHHHHHHHHhcCCCCCCE-EE
Q 008342 19 ALTPLWFINRAATLHPTRKSVVYGS-----------------------KHYTWHQTYRRCRRFASALSKLSIGLGTT-VS 74 (569)
Q Consensus 19 ~~~l~~~l~~~a~~~p~~~a~~~~~-----------------------~~~Ty~el~~~~~~la~~L~~~g~~~g~~-V~ 74 (569)
.-|+++++++.++++.++.++-..+ .-+||.|+..++.++|.+|.+.|++++++ |+
T Consensus 40 ~~Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~~~~~~~gsGL~~lG~k~~e~k~~ 119 (678)
T KOG1180|consen 40 ASTLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVYERVHNFGSGLVKLGLKPKETKIA 119 (678)
T ss_pred cccHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 6799999999999999999985422 45899999999999999999999997776 99
Q ss_pred EEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEe
Q 008342 75 VIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVI 154 (569)
Q Consensus 75 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 154 (569)
|+++.+.+|+++++||++.+.++|-+...+..+.+.+-|++++++.+|++.+.++.+...++..+ ..+++|.+
T Consensus 120 iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l~~~~-------~vk~II~~ 192 (678)
T KOG1180|consen 120 IFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPLKQAK-------TVKHIIYF 192 (678)
T ss_pred EEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHHhccC-------ceeEEEEe
Confidence 99999999999999999999999999999999999999999999999999999887777777666 67888888
Q ss_pred cCCCcch--hhhHHh--hhcchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhH
Q 008342 155 GDESCDS--KQLEYA--LARGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALI 230 (569)
Q Consensus 155 ~~~~~~~--~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~ 230 (569)
++.+... ...+.. ....+.+|++++..+.+...+..++.++|+|+|+|||||||.||||+++|.|+++........
T Consensus 193 d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~~~P~p~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~~~ 272 (678)
T KOG1180|consen 193 DPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENEIPPHPPKPSDIACIMYTSGSTGLPKGVMLTHSNIVAGVTGVGEN 272 (678)
T ss_pred cCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCCCCCCCCCCCceEEEEEcCCCCCCCceEEEecccHHhhhhhhccc
Confidence 8643222 222222 234578999999888877666666788999999999999999999999999999998877765
Q ss_pred h-CCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEeccCChHHH--------HHHHHhcCccEEeehHHHHHHHHccC
Q 008342 231 W-GMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICLRQVTAKAV--------YTAIATHGVTHFCAAPVVLNAIANAS 301 (569)
Q Consensus 231 ~-~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~--------~~~i~~~~~t~l~~~P~~~~~l~~~~ 301 (569)
. .+.+.|+++..+|+.|++-+.+-+.++..|+..-.-+..+...- --.+..++||++.++|.+|+++.+..
T Consensus 273 v~~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKgV 352 (678)
T KOG1180|consen 273 VPELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKGV 352 (678)
T ss_pred CcccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCcceecccchhhccCCcCccccccchhhhhhHHHHHHHHHHH
Confidence 5 68899999999999999999999999999988766544332222 22356789999999999999887552
Q ss_pred CCCC-----------------------------------------CCCcccceeeeecCCCCCHHHHHHhhhc-CCeEec
Q 008342 302 PEDT-----------------------------------------ILPLTNVVNVNTAGAPPPPSLLFAMSQK-GFRITH 339 (569)
Q Consensus 302 ~~~~-----------------------------------------~~~l~~l~~~~~~g~~l~~~~~~~~~~~-~~~i~~ 339 (569)
...- ...-.+||.+++||++++++..+.+.-. .+++.+
T Consensus 353 l~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF~nic~C~Pv~q 432 (678)
T KOG1180|consen 353 LSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQRFMNICFCCPVLQ 432 (678)
T ss_pred HHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHHHHHHhccccccc
Confidence 1100 0014489999999999999999998854 889999
Q ss_pred ccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccccccCC
Q 008342 340 TYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGYLKN 419 (569)
Q Consensus 340 ~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~ 419 (569)
+||.||+++.++...+. ....+.+|.|++.+ +++++|-+.+.=.+.+....||||++|++++.||+++
T Consensus 433 GYGLTEtca~~tv~e~~-----------d~~~g~vG~pl~c~-eiKLvdw~EgGY~~~~~PPrGEI~i~G~~vt~gY~kn 500 (678)
T KOG1180|consen 433 GYGLTETCAAATVLEPE-----------DFSTGRVGAPLPCC-EIKLVDWEEGGYFAKNKPPRGEILIGGPNVTMGYYKN 500 (678)
T ss_pred cccccchhcccEecChh-----------hcccccccCCccce-EEEEEEhhhcCccCCCCCCCceEEecCCccChhhhCC
Confidence 99999999888775422 22237899999999 6999998766655555445799999999999999999
Q ss_pred cchhhhhh--cCC--eeecCceeEEcCCCeEEEecccCceEE-eCceeechHHHHHHHhcCCCceeeEEEeecCCCCCce
Q 008342 420 PKANEEAF--ANG--WFHSGDLAVKHPDNYIEIKDRLKDVII-SGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGES 494 (569)
Q Consensus 420 ~~~~~~~~--~~g--~~~tGD~~~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~ 494 (569)
++.+.+.| .+| ||+|||+|++++||+|.+..|.+|++| .+|+.|.+..||++++..|.|.+.+|.+..... .
T Consensus 501 ~ekT~e~ft~~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~s~p~V~NICvyAd~~~s---~ 577 (678)
T KOG1180|consen 501 EEKTKEDFTVEDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLGKVEAALRSSPYVDNICVYADSNKS---K 577 (678)
T ss_pred hhhhhhhceecCCcEEEeccccceecCCCcEEEeechhhhhhhcccceeehHHHHHHHhcCcchhheEEecccccc---e
Confidence 99999999 378 999999999999999999999999999 899999999999999999999999999876654 6
Q ss_pred eeEEEEecCCcchh----------hhh----------hHHHHHHHHH-HhcCCCCcCCceEEeccCCC-------CCCCc
Q 008342 495 PCAFVTLKPEADEL----------DKG----------KLAEDVSKFC-RAKMPSYWVPKSVVFAALPK-------SATGK 546 (569)
Q Consensus 495 ~~~~v~~~~~~~~~----------~~~----------~~~~~l~~~~-~~~l~~~~~p~~i~~~~lP~-------t~~GK 546 (569)
++++|++.+..-.. +.+ +..++|.+.- .++|..+.+|..|++.+.|= |+.-|
T Consensus 578 ~VaiVVPn~~~lt~lA~k~Gi~~~~~e~lc~d~k~~~~v~k~L~~~ak~~~L~~iEip~~I~l~~e~WTPenGlvT~A~K 657 (678)
T KOG1180|consen 578 PVAIVVPNQKHLTKLAEKAGISGSTWEELCEDKKVVKAVLKELIEAAKSQKLERIEIPAKIVLSPEPWTPENGLVTAALK 657 (678)
T ss_pred eEEEEcCCchHHHHHHHHcCCChhhHHHHhccHHHHHHHHHHHHHHHHhcccccccccceeEecCCCcCCCccccHHHHH
Confidence 89999988753210 000 1223333333 44588999999999877553 55669
Q ss_pred ccHHHHHHHHHhcC
Q 008342 547 IQKHLLRAKAKEMG 560 (569)
Q Consensus 547 i~r~~l~~~~~~~~ 560 (569)
+.|+.++..|++..
T Consensus 658 LKRk~I~~~~k~ei 671 (678)
T KOG1180|consen 658 LKRKEILAAYKKEI 671 (678)
T ss_pred hhHHHHHHHHHHHH
Confidence 99999999888653
No 114
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.9e-58 Score=465.99 Aligned_cols=406 Identities=18% Similarity=0.209 Sum_probs=348.2
Q ss_pred eeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCC
Q 008342 38 SVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHAS 117 (569)
Q Consensus 38 a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 117 (569)
++++.++++||.||.++++++|+.|. .|+++|++|+++++|+++++++++||+++|++++|+++..+.+++..++++++
T Consensus 1 ~~~~~~~~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~ 79 (414)
T PRK08308 1 MLIVNDEEYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAG 79 (414)
T ss_pred CeEecCceecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCC
Confidence 46788899999999999999999985 68999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHhhhhcCCCCCCCCCCCCcCce
Q 008342 118 SAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEKFLETGDPEFAWKPPEDEWQS 197 (569)
Q Consensus 118 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 197 (569)
++.+++++.... .. . .....++++
T Consensus 80 ~~~~i~~~~~~~--------~~----------------~--------------------------------~~~~~~~~~ 103 (414)
T PRK08308 80 CHGLLYGESDFT--------KL----------------E--------------------------------AVNYLAEEP 103 (414)
T ss_pred CCEEEecCcccc--------cc----------------c--------------------------------CCCCCCCCc
Confidence 999998763100 00 0 001345689
Q ss_pred EEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHH-HHHHHHhcceEEEeccCChHHHH
Q 008342 198 IALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSY-TWSLAALCGTSICLRQVTAKAVY 276 (569)
Q Consensus 198 ~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~-~~~~~~~g~~~~~~~~~~~~~~~ 276 (569)
++++|||||||.||+|.+||+++..........+.+..+|+++..+|++|.+|+.. .+..+..|+++++...+++..++
T Consensus 104 ~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~ 183 (414)
T PRK08308 104 SLLQYSSGTTGEPKLIRRSWTEIDREIEAYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFAL 183 (414)
T ss_pred eEEEECCCCCCCCcEEEEehHhHHHHHHHHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHH
Confidence 99999999999999999999999988888778888899999999999999999854 45555678888888888999999
Q ss_pred HHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhhcCCeEecccccccCCCCccccccC
Q 008342 277 TAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQKGFRITHTYGLTELTGPASVCAWK 356 (569)
Q Consensus 277 ~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~ 356 (569)
+.++++++|++.++|+++..+.+.... ..+++.++++|+++++++.+++++.+.++++.||+||++.+.....
T Consensus 184 ~~l~~~~~t~~~~~P~~~~~l~~~~~~-----~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~-- 256 (414)
T PRK08308 184 NILRNTPQHILYAVPLMLHILGRLLPG-----TFQFHAVMTSGTPLPEAWFYKLRERTTYMMQQYGCSEAGCVSICPD-- 256 (414)
T ss_pred HHHHHhCCeEEEcCHHHHHHHHhcCCc-----cccccEEEEccCCCCHHHHHHHHHhCChhhhccCccccCCeeecCC--
Confidence 999999999999999999999876432 2367889999999999999999877889999999999985332211
Q ss_pred CCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccccccCCcchhhhhhcCCeeecCc
Q 008342 357 PEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGD 436 (569)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~tGD 436 (569)
.....++|.|.+++ ++++.+.+ + +.||+++++. ++||+|||
T Consensus 257 -----------~~~~~~~G~p~~~~-~~~~~~~~-------~--~~gel~v~~~------------------~~~~~TGD 297 (414)
T PRK08308 257 -----------MKSHLDLGNPLPHV-SVSAGSDE-------N--APEEIVVKMG------------------DKEIFTKD 297 (414)
T ss_pred -----------CCCCCccCccCCCe-EEEEecCC-------C--CCceEEEEcC------------------CceEECCc
Confidence 01236789999998 58776532 2 5699999752 57999999
Q ss_pred eeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHH
Q 008342 437 LAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAED 516 (569)
Q Consensus 437 ~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~ 516 (569)
+++++++|.+++.||.||+|+++|++|+|.+||++|.++|+|.+++|++.+++..++.+.++++..... ..++
T Consensus 298 l~~~~~dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~v~~~~~~-------~~~~ 370 (414)
T PRK08308 298 LGYKSERGTLHFMGRMDDVINVSGLNVYPIEVEDVMLRLPGVQEAVVYRGKDPVAGERVKAKVISHEEI-------DPVQ 370 (414)
T ss_pred eEEECCCccEEEecccCCeEEECCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCCCC-------CHHH
Confidence 999999999999999999999999999999999999999999999999999998889998888866432 3478
Q ss_pred HHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHH
Q 008342 517 VSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLR 553 (569)
Q Consensus 517 l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~ 553 (569)
+.++++++|+.|++|..+.+++ ||+|++||++|+.|+
T Consensus 371 l~~~l~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~~~ 408 (414)
T PRK08308 371 LREWCIQHLAPYQVPHEIESVTEIPKNANGKVSRKLLE 408 (414)
T ss_pred HHHHHHHhCccccCCcEEEEeccCCCCCCcCeehhhhh
Confidence 8999999999999999999877 999999999999654
No 115
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.6e-57 Score=481.51 Aligned_cols=494 Identities=21% Similarity=0.225 Sum_probs=375.9
Q ss_pred CHHHHHHHhhhhCCCceeeeeCC--eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEe
Q 008342 21 TPLWFINRAATLHPTRKSVVYGS--KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLN 98 (569)
Q Consensus 21 ~l~~~l~~~a~~~p~~~a~~~~~--~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (569)
++.+.|..+|..+|+.+++...+ +.+||.||+++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g~v~~ 82 (545)
T PRK07768 3 RFTEKMYANARTSPRGMVTGEPDAPVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRGASLT 82 (545)
T ss_pred hHHHHHHHHhhCCCcceEEecCCCceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcCcccc
Confidence 57788889999999999996654 6899999999999999999999999999999999999999999999999999999
Q ss_pred eccccCCHHHH-------HHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcc
Q 008342 99 SINIRLNATVV-------AFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARG 171 (569)
Q Consensus 99 ~l~~~~~~~~l-------~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 171 (569)
++++..+.+++ ..+++.++++.+++++........... ....
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~----------~~~~--------------------- 131 (545)
T PRK07768 83 MLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLEE----------KGIR--------------------- 131 (545)
T ss_pred ccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhcc----------cCCc---------------------
Confidence 99988776544 456777899999998765432221100 0001
Q ss_pred hhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCC-cEEEEcCCccchhh
Q 008342 172 AIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEG-AVFLWTLPMFHGNG 250 (569)
Q Consensus 172 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~-d~~~~~~p~~~~~g 250 (569)
...+++++..... ......++++++++|||||||.||+|.++|+++..........+++..+ |++++.+|++|..+
T Consensus 132 ~~~~~~l~~~~~~---~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g 208 (545)
T PRK07768 132 VLTVADLLAADPI---DPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAEFDVETDVMVSWLPLFHDMG 208 (545)
T ss_pred eeehhhhcccCCC---CcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcCCCCCCceeEEeCCCccchH
Confidence 1233333332211 1123457899999999999999999999999998888777777788876 89999999999999
Q ss_pred HHHHHHH-HHhcceEEEecc----CChHHHHHHHHhcCccEEeehHHHHHHHHccCC----CCCCCCcccceeeeecCCC
Q 008342 251 WSYTWSL-AALCGTSICLRQ----VTAKAVYTAIATHGVTHFCAAPVVLNAIANASP----EDTILPLTNVVNVNTAGAP 321 (569)
Q Consensus 251 ~~~~~~~-~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~----~~~~~~l~~l~~~~~~g~~ 321 (569)
+...+.. +..|++.+.... .++..+.+.+++++++++.+.|.++..+..... ..... ++++|.++++|++
T Consensus 209 ~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~lr~~~~~g~~ 287 (545)
T PRK07768 209 MVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFD-LSSLRFALNGAEP 287 (545)
T ss_pred HHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCC-chheeeEEeccCC
Confidence 8765554 455665555543 367889999999999999888887776654321 11223 7899999999999
Q ss_pred CCHHHHHHhhh----cCC---eEecccccccCCCCccccccCCCC-------CCC-------C-chhhhhccccCCceee
Q 008342 322 PPPSLLFAMSQ----KGF---RITHTYGLTELTGPASVCAWKPEW-------DSL-------P-FETQARLNARQGVRTI 379 (569)
Q Consensus 322 l~~~~~~~~~~----~~~---~i~~~YG~tE~~~~~~~~~~~~~~-------~~~-------~-~~~~~~~~~~~G~~~~ 379 (569)
+++.+.+++.+ +|. .+++.||+||++..++........ ... + .........++|.|.+
T Consensus 288 ~~~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 367 (545)
T PRK07768 288 IDPADVEDLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLP 367 (545)
T ss_pred CCHHHHHHHHHHHHhcCCCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCC
Confidence 99999988865 344 499999999998655443221110 000 0 0001223467999999
Q ss_pred ccCCceeeeCCCCcccCCCCCceEEEEEecCcccccccCCcchhhhhhcCCeeecCceeEEcCCCeEEEecccCceEEeC
Q 008342 380 CLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPDNYIEIKDRLKDVIISG 459 (569)
Q Consensus 380 ~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~ 459 (569)
++ +++++|++ +++++.+ +.|||+++|+.++.||++.+......+.+|||+|||+++++++|.++++||.||+|+.+
T Consensus 368 g~-~~~i~~~~-~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~ 443 (545)
T PRK07768 368 GL-EVRVVDED-GQVLPPR--GVGVIELRGESVTPGYLTMDGFIPAQDADGWLDTGDLGYLTEEGEVVVCGRVKDVIIMA 443 (545)
T ss_pred CC-EEEEECCC-CCCCCCC--CEEEEEEccCcccccccCCCCCcccccCCCeeeccceEEEecCCEEEEEccccceEEEC
Confidence 99 69999965 8888877 78999999999999999876655555568899999999999999999999999999999
Q ss_pred ceeechHHHHHHHhcCCCceeeEEEeec--CCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCC--cCCceEE
Q 008342 460 GENISSVEVEKVLYLHPLVLEAAVVARP--DERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSY--WVPKSVV 535 (569)
Q Consensus 460 G~~v~~~~iE~~l~~~~~v~~~~v~~~~--~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~--~~p~~i~ 535 (569)
|.++++.+||..|.++|+|.+++|++.. +...++...++++....... ....++.+++++.+..+ .+|..+.
T Consensus 444 G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~~v~~~~~~~~----~~~~~l~~~~~~~l~~~~~~~p~~v~ 519 (545)
T PRK07768 444 GRNIYPTDIERAAARVEGVRPGNAVAVRLDAGHSREGFAVAVESNAFEDP----AEVRRIRHQVAHEVVAEVGVRPRNVV 519 (545)
T ss_pred CEecCHHHHHHHHHhCcccccceEEEEEecCCCCceEEEEEEEecccccH----HHHHHHHHHHHHHHHHHhCCCccEEE
Confidence 9999999999999999999998777654 33334555555544433222 13345666666655433 5787776
Q ss_pred ec---cCCCCCCCcccHHHHHHHHH
Q 008342 536 FA---ALPKSATGKIQKHLLRAKAK 557 (569)
Q Consensus 536 ~~---~lP~t~~GKi~r~~l~~~~~ 557 (569)
++ +||+|++||++|+.|+++|.
T Consensus 520 ~v~~~~lP~t~~GKi~r~~l~~~~~ 544 (545)
T PRK07768 520 VLGPGSIPKTPSGKLRRANAAELVT 544 (545)
T ss_pred EeCCCcCCCCCchhHHHHHHHHhcC
Confidence 55 39999999999999998764
No 116
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=8.1e-55 Score=416.76 Aligned_cols=501 Identities=21% Similarity=0.257 Sum_probs=395.4
Q ss_pred ccccCHHHHHHHhhhhCCCceeeeeCC--eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcC
Q 008342 17 YTALTPLWFINRAATLHPTRKSVVYGS--KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAG 94 (569)
Q Consensus 17 ~~~~~l~~~l~~~a~~~p~~~a~~~~~--~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 94 (569)
-++.|+++++.++++++|+++|+++.+ +++||+|+++.++++|+.|...|++.||.|++.|+|.++++.++||++++|
T Consensus 74 r~~~ti~~~F~~~vrr~p~k~aii~~~~~~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLaKlG 153 (649)
T KOG1179|consen 74 RERRTIAELFLSQVRRQPDKPAIIYEGPFQSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLAKLG 153 (649)
T ss_pred ccCCcHHHHHHHHHHhCCCccEEEEeCCCceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHHhhC
Confidence 457799999999999999999999987 799999999999999999999999999999999999999999999999999
Q ss_pred ceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhh
Q 008342 95 AVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIE 174 (569)
Q Consensus 95 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 174 (569)
++.+.+|+++..+.|.|-|..++++++|++.+..+.+.+..+.+.. ...+++..+.... ..+..+
T Consensus 154 v~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~------~~i~~~~~~~~~~---------~~g~~~ 218 (649)
T KOG1179|consen 154 VITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIK------NGIHVFSLGPTSV---------PDGIES 218 (649)
T ss_pred ceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhh------ccceEEecCCCCC---------CchHHH
Confidence 9999999999999999999999999999999988777776444431 2344455543321 223345
Q ss_pred HHhhhhcCCCCC---CCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhH
Q 008342 175 YEKFLETGDPEF---AWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGW 251 (569)
Q Consensus 175 ~~~~l~~~~~~~---~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~ 251 (569)
+...++.....+ .........++++.+|||||||.||+.++||......+......++++++|+++..+|++|..|.
T Consensus 219 L~~~l~~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ 298 (649)
T KOG1179|consen 219 LLAKLSAAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTADDVVYTTLPLYHSAAG 298 (649)
T ss_pred HHHhhcccccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCccceEEEcchhHHHHHH
Confidence 555555544443 22234577789999999999999999999999988888778889999999999999999999988
Q ss_pred HHHHHH-HHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHh
Q 008342 252 SYTWSL-AALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAM 330 (569)
Q Consensus 252 ~~~~~~-~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~ 330 (569)
...... +..|+++++-.+|+...+|+...+|++|++.-...+.+.|++.+...... --.+| +.-|..+.+++++.|
T Consensus 299 ilGi~~~l~~GaT~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er-~HkVR--la~GNGLR~diW~~F 375 (649)
T KOG1179|consen 299 ILGIGGCLLHGATVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEER-QHKVR--LAYGNGLRPDIWQQF 375 (649)
T ss_pred HHHHHHHHhcCceEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhc-CceEE--EEecCCCCchHHHHH
Confidence 766555 45566666668899999999999999999999999999999997765443 33444 445666888888888
Q ss_pred h-hcCC-eEecccccccCCCCccccccCCCCCCCCchhhhhccccCCc------eeeccCCceeeeCCC--------Ccc
Q 008342 331 S-QKGF-RITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGV------RTICLDGLDVIDART--------NQP 394 (569)
Q Consensus 331 ~-~~~~-~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~------~~~~~~~~~i~d~~~--------~~~ 394 (569)
. ++|. +|.+.||+||..........+ .+.+|. .+..+ ++--.|+++ |-.
T Consensus 376 v~RFg~~~IgE~YgaTEgn~~~~N~d~~--------------vGA~G~~~~~~~~l~p~-~LIk~D~~t~E~iRd~~G~C 440 (649)
T KOG1179|consen 376 VKRFGIIKIGEFYGATEGNSNLVNYDGR--------------VGACGFMSRLLKLLYPF-RLIKVDPETGEPIRDSQGLC 440 (649)
T ss_pred HHHcCCCeEEEEeccccCcceeeeecCc--------------cccccchhhhhhhccce-EEEEecCCCCceeecCCceE
Confidence 7 5665 599999999986443332111 111111 11111 122233333 444
Q ss_pred cCCCCCceEEEEEe--cCcc---cccccCCcchhhhhh-----c--CCeeecCceeEEcCCCeEEEecccCceEEeCcee
Q 008342 395 VPADGKTIGEIVMR--GSCV---MKGYLKNPKANEEAF-----A--NGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGEN 462 (569)
Q Consensus 395 ~~~~~~~~Gel~v~--~~~~---~~gy~~~~~~~~~~~-----~--~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~ 462 (569)
+++..+|.|.++-+ ...- +.||.+....+.... . |-||+|||+-.+|+.|++||..|..|.++..|++
T Consensus 441 i~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGEN 520 (649)
T KOG1179|consen 441 IPCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGEN 520 (649)
T ss_pred EECCCCCCceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCCc
Confidence 44444588866543 2223 789998666665543 2 4599999999999999999999999999999999
Q ss_pred echHHHHHHHhcCCCceeeEEEeecCCCC-CceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CC
Q 008342 463 ISSVEVEKVLYLHPLVLEAAVVARPDERW-GESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LP 540 (569)
Q Consensus 463 v~~~~iE~~l~~~~~v~~~~v~~~~~~~~-g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP 540 (569)
|+..|||++|..+..+.|+.|.|+.-+.. |..=.|.|+..+.... +...+-+.+++.||+|.+|.++.+.+ |+
T Consensus 521 VsTtEVe~~l~~~~~~~dv~VYGV~VP~~EGRaGMAaI~~~p~~~~-----d~~~l~~~l~~~LP~YA~P~FlRl~~~i~ 595 (649)
T KOG1179|consen 521 VSTTEVEDVLSALDFLQDVNVYGVTVPGYEGRAGMAAIVLDPTTEK-----DLEKLYQHLRENLPSYARPRFLRLQDEIE 595 (649)
T ss_pred ccHHHHHHHHhhhccccceeEEEEecCCccCccceEEEEecCcccc-----hHHHHHHHHHhhCccccchHHHHHHhhhh
Confidence 99999999999999999999999976654 3333566666666555 78899999999999999999999887 99
Q ss_pred CCCCCcccHHHHHHH
Q 008342 541 KSATGKIQKHLLRAK 555 (569)
Q Consensus 541 ~t~~GKi~r~~l~~~ 555 (569)
+|.+=|..+..|.+.
T Consensus 596 ~TgTFKl~K~~L~~e 610 (649)
T KOG1179|consen 596 KTGTFKLQKTELQKE 610 (649)
T ss_pred cccchhhHHHHHHHc
Confidence 999999999988754
No 117
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=2.2e-55 Score=450.06 Aligned_cols=400 Identities=26% Similarity=0.395 Sum_probs=315.0
Q ss_pred HHHhhhhCCCceeeee-CCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccC
Q 008342 26 INRAATLHPTRKSVVY-GSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRL 104 (569)
Q Consensus 26 l~~~a~~~p~~~a~~~-~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~ 104 (569)
|+++|+++||++|+++ .++.+||+||+++++++|..|.++|+++|++|+++++|+++++++++||+++|++++|++|.+
T Consensus 1 f~~~a~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~l~~~~ 80 (417)
T PF00501_consen 1 FERQAQRYPDRIALIDDEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVPLDPSL 80 (417)
T ss_dssp HHHHHHHSTTSEEEEETTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS
T ss_pred ChhHHhhCCCceEEEECCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeeccccccccccccccccc
Confidence 6899999999999999 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCceEEEEc--ccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHhhhhcC
Q 008342 105 NATVVAFILSHASSAVVIVD--QEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEKFLETG 182 (569)
Q Consensus 105 ~~~~l~~~l~~~~~~~vi~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 182 (569)
+.+++.++++.++++++|++ .+... +......... ......++.++......... ..........
T Consensus 81 ~~~~~~~~l~~~~~~~ii~~~~~d~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 147 (417)
T PF00501_consen 81 SEDELRHILRQSGPKVIITSEAVDSEP-LKKLKSIFKQ----EDPSSSIIILDRDDLPKKEA--------LKSASLSDEP 147 (417)
T ss_dssp SHHHHHHHHHHHTESEEEECHHHSCHH-HHHHHHHHTT----STTTEEEEEESHSSCTTCHH--------HHHHHHCHCS
T ss_pred ccccccccccccceeEEEEeccccccc-cccchhhhcc----cccccccccccccccccccc--------cccccccccc
Confidence 99999999999999999981 01111 2222111110 00234455555433211100 0000000000
Q ss_pred CCCCCCCCC-CCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhH--hHhCCCCCcEEEEcCCccchhhH-HHHHHHH
Q 008342 183 DPEFAWKPP-EDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGA--LIWGMNEGAVFLWTLPMFHGNGW-SYTWSLA 258 (569)
Q Consensus 183 ~~~~~~~~~-~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~--~~~~~~~~d~~~~~~p~~~~~g~-~~~~~~~ 258 (569)
. .+ ..++++++++|||||||.||+|.++|+++++.+.... ..++++ |++++.+|++|.+|+ ...+.++
T Consensus 148 ~------~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~~l 219 (417)
T PF00501_consen 148 Q------SPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIFGLISALLAAL 219 (417)
T ss_dssp H------STTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHHHHHHHHHHHH
T ss_pred c------cCCCCccceeEeeccccccccccccccccccccccccccccccccccC--ceEEeeccccccccccccccccc
Confidence 0 00 0457999999999999999999999999988877754 223333 599999999999999 6666666
Q ss_pred HhcceEEEeccCC---hHHHHHHHHhcCccEEeehHHHHHHHHccCCCC----CCCCcccceeeeecCCCCCHHHHHHhh
Q 008342 259 ALCGTSICLRQVT---AKAVYTAIATHGVTHFCAAPVVLNAIANASPED----TILPLTNVVNVNTAGAPPPPSLLFAMS 331 (569)
Q Consensus 259 ~~g~~~~~~~~~~---~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~----~~~~l~~l~~~~~~g~~l~~~~~~~~~ 331 (569)
..|+++++.+... ++.+++.++++++|++.++|++++.+++..... ... ++++|.++++|+++++++.++++
T Consensus 220 ~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~-l~~lr~v~~~G~~l~~~~~~~~~ 298 (417)
T PF00501_consen 220 FSGATLVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKD-LSSLRTVISGGEPLPPDLLRRLR 298 (417)
T ss_dssp HCTSEEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTT-GTT-SEEEEESST-CHHHHHHHH
T ss_pred cccccccccccccccccccchhcccccccccccccccccccccccccccccccccc-cccccccccccccCChhhccccc
Confidence 6777777776543 477899999999999999999999999843221 123 88899999999999999999999
Q ss_pred hc-CC-eEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEec
Q 008342 332 QK-GF-RITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRG 409 (569)
Q Consensus 332 ~~-~~-~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~ 409 (569)
+. +. ++++.||+||++++++.... .......+++|.|++++ +++|+|++++++++.| +.|||+++|
T Consensus 299 ~~~~~~~i~~~YG~tE~~~~~~~~~~---------~~~~~~~~~~G~~~~~~-~~~ivd~~~~~~~~~g--~~Gei~i~~ 366 (417)
T PF00501_consen 299 KAFGNAPIINLYGSTETGSIATIRPP---------EDDIEKPGSVGKPLPGV-EVKIVDPNTGEPLPPG--EPGEIVIRG 366 (417)
T ss_dssp HHHTTSEEEEEEEEGGGSSEEEEEET---------TTHHSSTTSEBEESTTE-EEEEECTTTSSBESTT--SEEEEEEES
T ss_pred cccccccceecccccccceeeecccc---------ccccccccccccccccc-cccccccccccccccc--ccccccccC
Confidence 65 65 89999999999988865421 11222346889999999 6999999999999988 789999999
Q ss_pred CcccccccCCcchhhhhhcC-CeeecCceeEEcCCCeEEEecccCceEEeC
Q 008342 410 SCVMKGYLKNPKANEEAFAN-GWFHSGDLAVKHPDNYIEIKDRLKDVIISG 459 (569)
Q Consensus 410 ~~~~~gy~~~~~~~~~~~~~-g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~ 459 (569)
++++.||+++++.+...|.+ |||+|||+|++++||+++++||.||+||++
T Consensus 367 ~~~~~gy~~~~~~~~~~~~~~~~~~TGD~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 367 PNVFSGYYNDPELTAEAFIDDGWYRTGDLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp TTSBSEETTBHHHHHHHEETTSEEEEEEEEEEETTSEEEEEEEGSCEEEET
T ss_pred CccceeeeccccccccccccccceecceEEEECCCCeEEEEEeeCCEEEeC
Confidence 99999999999999999976 899999999999999999999999999864
No 118
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=6.3e-51 Score=416.05 Aligned_cols=393 Identities=25% Similarity=0.301 Sum_probs=327.2
Q ss_pred eHHHHHHHHHHHHHHHHh-cCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcc
Q 008342 47 TWHQTYRRCRRFASALSK-LSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQ 125 (569)
Q Consensus 47 Ty~el~~~~~~la~~L~~-~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 125 (569)
||.||.+.+.++|++|.+ .|+++||+|+++++|+++++++++||+++|++++++++.++.+.+.++++.+++++++++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 799999999999999998 8999999999999999999999999999999999999999999999999999999999998
Q ss_pred cchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHhhhhcCCCCCCCCCCCCcCceEEEEeccC
Q 008342 126 EFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSG 205 (569)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSG 205 (569)
+....+... ....+.+... +...................+++++++||||
T Consensus 81 ~~~~~~~~~-------------~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSG 130 (408)
T TIGR01733 81 ALASRLAGL-------------VLPIILVDPL-----------------ELAALDDAPAPPPPDAPSGPDDLAYVIYTSG 130 (408)
T ss_pred chhhhcccc-------------CCceEEechh-----------------hhhhcccccccccccCCCCCCCcEEEEEcCC
Confidence 765443221 1112222111 0000001000000111135688999999999
Q ss_pred CCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEeccC---ChHHHHHHHHhc
Q 008342 206 TTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICLRQV---TAKAVYTAIATH 282 (569)
Q Consensus 206 sTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~~---~~~~~~~~i~~~ 282 (569)
|||.||+|.+||+++..........+++.++|++++..|++|.+++...+..+..|+++++.+.. .+..+.+.++++
T Consensus 131 TtG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~ 210 (408)
T TIGR01733 131 STGRPKGVVVTHRSLVNLLAWLARRYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEH 210 (408)
T ss_pred CCCCCCEEEeccHHHHHHHHHHHHhcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHc
Confidence 99999999999999999998888888999999999999999999998888888888888887553 368899999999
Q ss_pred CccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhhc-C-CeEecccccccCCCCccccccCCCCC
Q 008342 283 GVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQK-G-FRITHTYGLTELTGPASVCAWKPEWD 360 (569)
Q Consensus 283 ~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~-~-~~i~~~YG~tE~~~~~~~~~~~~~~~ 360 (569)
++|.+.++|.+++.+.+... .. ++++|.++++|+++++++.+.+.+. + +.+++.||+||+++++..........
T Consensus 211 ~~t~l~~~p~~~~~l~~~~~---~~-~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~ 286 (408)
T TIGR01733 211 PVTVLNLTPSLLALLAAALP---PA-LASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDA 286 (408)
T ss_pred CceEEEeCHHHHHHHHHhhh---hc-ccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCcccc
Confidence 99999999999999998765 22 7899999999999999999999854 5 89999999999987665333222111
Q ss_pred CCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccccccCCcchhhhhhcC-------C--e
Q 008342 361 SLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAFAN-------G--W 431 (569)
Q Consensus 361 ~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-------g--~ 431 (569)
. .. ...++|.|.+++ +++|+|++ +++++.+ +.|||+++|+.++.||+++++.+...|.. | |
T Consensus 287 ~-----~~-~~~~~G~~~~~~-~~~i~~~~-~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~ 356 (408)
T TIGR01733 287 P-----RE-SPVPIGRPLANT-RLYVLDDD-LRPVPVG--VVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARL 356 (408)
T ss_pred C-----Cc-cccccCcccCCc-eEEEECCC-CCCCCCC--CceEEEecCccccccccCChhhhhcceeeCCCCCCCCceE
Confidence 0 00 257899999999 69999988 8888877 78999999999999999999888887743 2 9
Q ss_pred eecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEE
Q 008342 432 FHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAV 483 (569)
Q Consensus 432 ~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v 483 (569)
|+|||+++++++|++++.||.+|+++.+|++++|.+||++|.+++.|.+++|
T Consensus 357 ~~TGDl~~~d~~g~~~~~gR~~~~i~~~G~~v~~~~ie~~l~~~~~v~~~~v 408 (408)
T TIGR01733 357 YRTGDLVRYLPDGNLEFLGRIDDQVKIRGYRIELGEIEAALLRHPGVREAVV 408 (408)
T ss_pred EECCceEEEcCCCCEEEeeccCCEEEeCeEEechHHHHHHHhcCcchhhhcC
Confidence 9999999999999999999999999999999999999999999999998865
No 119
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=9.5e-47 Score=377.28 Aligned_cols=320 Identities=23% Similarity=0.313 Sum_probs=270.4
Q ss_pred CCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe---c
Q 008342 192 EDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL---R 268 (569)
Q Consensus 192 ~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~---~ 268 (569)
..++++++++|||||||.||+|.++|+++..........+ ...++++..+|++|.+|+...+..++.|++.+++ .
T Consensus 32 ~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~--~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v~~~~~~ 109 (358)
T PRK07824 32 PIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL--GGPGQWLLALPAHHIAGLQVLVRSVIAGSEPVELDVSA 109 (358)
T ss_pred CCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc--CCCCeEEEECChHHHHHHHHHHHHHHcCCeEEecCcCC
Confidence 4467999999999999999999999999988776555443 3567889999999999998777777888887763 4
Q ss_pred cCChHHHHHHHHhcC--ccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhhcCCeEecccccccC
Q 008342 269 QVTAKAVYTAIATHG--VTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQKGFRITHTYGLTEL 346 (569)
Q Consensus 269 ~~~~~~~~~~i~~~~--~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~~~~i~~~YG~tE~ 346 (569)
.+++..+++.+++++ .++...+|..+..++...... .. +++++.+++||+++++++.+++.+.++++++.||+||+
T Consensus 110 ~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~~~-~~-~~~l~~i~~gG~~l~~~~~~~~~~~~~~v~~~YG~TE~ 187 (358)
T PRK07824 110 GFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPAAT-AA-LAELDAVLVGGGPAPAPVLDAAAAAGINVVRTYGMSET 187 (358)
T ss_pred CcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCcccc-CC-cccceEEEECCCCCCHHHHHHHHhcCCcEEecccCCcc
Confidence 578999999999998 566677888887776654322 22 78999999999999999999988889999999999998
Q ss_pred CCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccccccCCcchhhhh
Q 008342 347 TGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEA 426 (569)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~ 426 (569)
++.+. ..|.|.+++ ++++. .|||+++|+.++.||++++.... .
T Consensus 188 ~~~~~---------------------~~G~~~~g~-~v~i~--------------~Gei~v~g~~~~~gY~~~~~~~~-~ 230 (358)
T PRK07824 188 SGGCV---------------------YDGVPLDGV-RVRVE--------------DGRIALGGPTLAKGYRNPVDPDP-F 230 (358)
T ss_pred CCCcC---------------------cCceeCCCC-EEEec--------------CCEEEEecCccccccCCCccccc-c
Confidence 75321 247777777 46662 19999999999999998876432 2
Q ss_pred hcCCeeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcc
Q 008342 427 FANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEAD 506 (569)
Q Consensus 427 ~~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~ 506 (569)
..+|||+|||++++ ++|.+++.||.||+|+.+|.+|+|.+||.+|.++|.|.+|+|++.+++..|+.++++++...+..
T Consensus 231 ~~~g~~~TGDl~~~-~~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~vv~~~~~~~g~~~~a~v~~~~~~~ 309 (358)
T PRK07824 231 AEPGWFRTDDLGAL-DDGVLTVLGRADDAISTGGLTVLPQVVEAALATHPAVADCAVFGLPDDRLGQRVVAAVVGDGGPA 309 (358)
T ss_pred cCCCceecccEEEE-eCCEEEEEeccCCeEEECCEEECHHHHHHHHHhCCCcceEEEEecCCCCCceEEEEEEEeCCCCC
Confidence 25789999999999 79999999999999999999999999999999999999999999999888999999987765433
Q ss_pred hhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHh
Q 008342 507 ELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKE 558 (569)
Q Consensus 507 ~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~ 558 (569)
. ..++|++++++.++.+++|..+.+++ ||+|++||++|++|+++|.+
T Consensus 310 ~-----~~~~i~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 357 (358)
T PRK07824 310 P-----TLEALRAHVARTLDRTAAPRELHVVDELPRRGIGKVDRRALVRRFAG 357 (358)
T ss_pred c-----CHHHHHHHHHhhCccccCCCEEEEecCCCCCCCccccHHHHHHHhhc
Confidence 3 56889999999999999999999877 99999999999999999865
No 120
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=4e-46 Score=413.07 Aligned_cols=481 Identities=14% Similarity=0.077 Sum_probs=350.7
Q ss_pred ccCHHHHHHHhhhhCCCceeeeeC---C--eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhc
Q 008342 19 ALTPLWFINRAATLHPTRKSVVYG---S--KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMA 93 (569)
Q Consensus 19 ~~~l~~~l~~~a~~~p~~~a~~~~---~--~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~ 93 (569)
-.|+.++|++.++++|+++|+... + +.+||+|+.+++.++|++|.++|+++||+|+|+++|+++|+++.+||+++
T Consensus 426 ~~Tl~dll~~~a~~~pd~~al~~~~~~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewvia~lA~~~~ 505 (1452)
T PTZ00297 426 VRSLGEMWERSVTRHSTFRCLGQTSESGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIVILEVACALY 505 (1452)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEEeccCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Confidence 358999999999999999999742 3 67999999999999999999999999999999999999999999999999
Q ss_pred CceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchh-hhHHhhhcch
Q 008342 94 GAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSK-QLEYALARGA 172 (569)
Q Consensus 94 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~ 172 (569)
|++.+|+++ +.+++.+++++++++++|++.+....+..... + ..++++++++...... ..+.......
T Consensus 506 GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~--~-------~Lr~IIv~d~~~~~~~~~~~~~~~i~~ 574 (1452)
T PTZ00297 506 GFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRS--R-------KLETVVYTHSFYDEDDHAVARDLNITL 574 (1452)
T ss_pred CCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhcc--c-------CCcEEEEECCCcccccccccccCCcce
Confidence 999999975 46789999999999999998776554443211 1 4678888864211000 0000001124
Q ss_pred hhHHhhhhcCCCCC-CCCCCCCcCceEEEEe---ccCCCCCCcceeecchHHHHHHHHhHhHh---CCCCCcEEEEcCCc
Q 008342 173 IEYEKFLETGDPEF-AWKPPEDEWQSIALGY---TSGTTASPKGVVVSHRGAYLMSLNGALIW---GMNEGAVFLWTLPM 245 (569)
Q Consensus 173 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~i~~---TSGsTG~pk~v~~t~~~~~~~~~~~~~~~---~~~~~d~~~~~~p~ 245 (569)
++|++++..+.... +......+++++.|+| ||||||.||||++||+|++..+....... ...++|++++.+|+
T Consensus 575 ~s~~~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~LPL 654 (1452)
T PTZ00297 575 IPYEFVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLMVHFTPF 654 (1452)
T ss_pred eeHHHHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEEEEechH
Confidence 67888887653211 1122346788998885 99999999999999999999888765432 35678999999999
Q ss_pred cchhhHHHHHHHHHhcceEEEeccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCC--------------------
Q 008342 246 FHGNGWSYTWSLAALCGTSICLRQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDT-------------------- 305 (569)
Q Consensus 246 ~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~-------------------- 305 (569)
+|+++....+.++..|+++.. +++..+++.|++++||++.++|.+|+.+.+......
T Consensus 655 aHI~er~~~~~~l~~G~~I~~---~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~~ 731 (1452)
T PTZ00297 655 AMLFNRVFVLGLFAHGSAVAT---VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLRSR 731 (1452)
T ss_pred HHHHHHHHHHHHHHcCCEEEe---CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Confidence 999997666666566666543 478999999999999999999999997765421100
Q ss_pred ------CCC---------------cccceeeeecCC--CCCHHHHHHhhhcCCeEecccccccCCCCccccccCCCCCCC
Q 008342 306 ------ILP---------------LTNVVNVNTAGA--PPPPSLLFAMSQKGFRITHTYGLTELTGPASVCAWKPEWDSL 362 (569)
Q Consensus 306 ------~~~---------------l~~l~~~~~~g~--~l~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~ 362 (569)
... -.++|.+++||. +++ .....+++++..||.||+. +..... .
T Consensus 732 ~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~-----~~l~~~i~i~~g~glTE~~---~~~~~~-~---- 798 (1452)
T PTZ00297 732 LINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTS-----FSLLEHISVCYVPCLREVF---FLPSEG-V---- 798 (1452)
T ss_pred HHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccC-----hHHhCCceEEEecceEEee---eecCCC-C----
Confidence 000 146888888873 444 3333467899999999953 222111 0
Q ss_pred CchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccccccCCcchhhhhhcCCeeecCceeEEcC
Q 008342 363 PFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHP 442 (569)
Q Consensus 363 ~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~ 442 (569)
....|.|+|++ +++|.+.+...-.+ ..|||+++ |+++++.|.+. .+||+ +
T Consensus 799 --------~~~~G~Plpgv-EvKI~~~~E~~~~~----~~GEIlvr-------~~kdpe~T~e~-~~gW~---------~ 848 (1452)
T PTZ00297 799 --------FCVDGTPAPSL-QVDLEPFDEPSDGA----GIGQLVLA-------KKGEPRRTLPI-AAQWK---------R 848 (1452)
T ss_pred --------cccCCeecCce-EEEEcccccccCCC----CCCeEEEE-------ECCChHHHHHh-hCcCc---------c
Confidence 01239999999 69998743211111 35999995 35778777763 35553 6
Q ss_pred CCeEEEecccCceEE-eCceeechHHHHHHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcch--------------
Q 008342 443 DNYIEIKDRLKDVII-SGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADE-------------- 507 (569)
Q Consensus 443 ~g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~-------------- 507 (569)
||+|+|.||.+|+|+ .+|++|.|+.||.++.++|.|.+++|+|...+. ++|+|++....-.
T Consensus 849 dG~L~IidRkKdlikls~GEyVaP~~IE~~l~~sp~I~qi~V~Gd~~k~----lvALVvpd~e~l~~~wa~~~gi~~~~~ 924 (1452)
T PTZ00297 849 DRTLRLLGPPLGILLPVAYEYVIAAELERIFSQSRYVNDIFLYADPSRP----IIAIVSPNRDTVEFEWRQSHCMGEGGG 924 (1452)
T ss_pred CCeEEEEeccccceECCCCcEEcHHHHHHHHhcCCCccEEEEEecCCCc----eEEEEEeCHHHHHHHHHHHcCCCcccc
Confidence 899999999999999 899999999999999999999999999987664 8888887653211
Q ss_pred ----hhhhhHHH----HHHHHH---H--hcCCCCcCCceEEecc--C-----CCCCCCcccHHHHHHHHHhcC
Q 008342 508 ----LDKGKLAE----DVSKFC---R--AKMPSYWVPKSVVFAA--L-----PKSATGKIQKHLLRAKAKEMG 560 (569)
Q Consensus 508 ----~~~~~~~~----~l~~~~---~--~~l~~~~~p~~i~~~~--l-----P~t~~GKi~r~~l~~~~~~~~ 560 (569)
.+..+..+ .+.+.+ . +.+..+.+++.+.+.. + -+||+.|+.|+.+.+.|.++-
T Consensus 925 ~~~~~~~~el~~~~~~~v~~~i~~V~~~n~l~~~ei~k~~~Ll~~~Ft~enGlLTPTlKlKR~~I~~kY~~~I 997 (1452)
T PTZ00297 925 PARQLGWTELVAYASSLLTADFACIAKENGLHPSNVPEYVHLHPHAFKDHSTFLTPYGKIRRDAVHSYFSSVI 997 (1452)
T ss_pred ccccCCHHHHHHhHHHHHHHHHHHHHHHhCcCccceeeEEEEeCCCCCCCCCcCChhhhhhHHHHHHHHHHHH
Confidence 01111111 233322 2 1256678888776643 3 279999999999999998653
No 121
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.1e-38 Score=344.01 Aligned_cols=409 Identities=22% Similarity=0.266 Sum_probs=338.1
Q ss_pred ccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEe
Q 008342 19 ALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLN 98 (569)
Q Consensus 19 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (569)
..++..++.+.+...|+++|+.+.+.++||+|+..+++++|+.|.+.|+++++.|+++++.+.++++.++|++++|..++
T Consensus 226 ~~~i~~~f~~~a~~~p~~~a~~~~~~~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~~i~~~l~ilkaG~~yv 305 (642)
T COG1020 226 RLTIHLLFEEQAATTPDAVALVRGGQQLTYAELDARANRLARLLISLGVGPGETVAILADRSLELVVALLAVLKAGAAYV 305 (642)
T ss_pred cchHHHHHHHHHHhCCCceeEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHHHHHHHHHHHhcCCeEe
Confidence 46899999999999999999999999999999999999999999999999999999999889999999999999999999
Q ss_pred eccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHhh
Q 008342 99 SINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEKF 178 (569)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (569)
|+++.++.+++..++++.+++.+++.......... ... +.++..
T Consensus 306 P~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~--------------~~~-~~~~~~--------------------- 349 (642)
T COG1020 306 PLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVG--------------LPG-LALDDA--------------------- 349 (642)
T ss_pred cCCCCChHHHHHHHHhhcCccEEEecccccccccc--------------CCc-cccccc---------------------
Confidence 99999999999999999999999988432211000 000 111110
Q ss_pred hhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHHHHHHH
Q 008342 179 LETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSYTWSLA 258 (569)
Q Consensus 179 l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~ 258 (569)
........+.......++.++++|||||||.||||..+|+++.....+....+.+..+|+++...++.+.......+...
T Consensus 350 ~~~~~~~~~~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~~~~~d~~l~~~s~~fD~~~~~~f~~l 429 (642)
T COG1020 350 LSEIPDTDPIPQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFGLDADDRVLALASLSFDASVFEIFGAL 429 (642)
T ss_pred cccCCccCcccccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcCCCcccEEeecCCcccchhHHHHHHHH
Confidence 00000000001223557899999999999999999999999998777777789999999999999998888888888888
Q ss_pred HhcceEEEecc---CChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCC-CCCcccceeeeecCCCCCHHHHHHhhhc-
Q 008342 259 ALCGTSICLRQ---VTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDT-ILPLTNVVNVNTAGAPPPPSLLFAMSQK- 333 (569)
Q Consensus 259 ~~g~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~-~~~l~~l~~~~~~g~~l~~~~~~~~~~~- 333 (569)
+.|+.++.... .++..+.+.+.++++|++..+|.++..+........ ......+|.+++||+.++..+..++...
T Consensus 430 ~~G~~l~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~ 509 (642)
T COG1020 430 LEGARLVLAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCERLRQLLSGGEALPLALVQRLLQLA 509 (642)
T ss_pred hCCCEEEecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccccCCcccccEEEEcCCCCCHHHHHHHHHhc
Confidence 89998888743 678999999999999999999999999887622211 1113359999999999999999988754
Q ss_pred --CCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCc
Q 008342 334 --GFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSC 411 (569)
Q Consensus 334 --~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~ 411 (569)
...+++.||.||+............. .. ...+|.|+++. .+.|+| +.++++|.+ ..||+++.|.+
T Consensus 510 ~~~~~l~~~ygpTe~~~~~~~~~~~~~~--------~~-~~piG~p~~n~-~~~ild-~~~~~~p~g--v~gel~i~g~~ 576 (642)
T COG1020 510 ALARRLLNLYGPTEATLDAPSFPISAEL--------ES-RVPIGRPVANT-QLYILD-QGLRPLPLG--VPGELYIAGLG 576 (642)
T ss_pred cccceEeeccCccHHhhheeeEEccccc--------CC-CCCcceeeCCC-eEEEEC-CCCCcCCCC--CCeeeEECCcc
Confidence 46899999999965544433211110 00 46899999998 699999 459999999 78999999999
Q ss_pred ccccccCCcchhhhhhcCC-eeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCC
Q 008342 412 VMKGYLKNPKANEEAFANG-WFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHP 476 (569)
Q Consensus 412 ~~~gy~~~~~~~~~~~~~g-~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~ 476 (569)
+..||+++++.+..+|... +|+|||++++.++|.+.++||.|+++|++|+++.+.+||..+.++|
T Consensus 577 ~a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~~dg~~e~lgr~D~qvki~g~Riel~eie~~l~~~~ 642 (642)
T COG1020 577 LALGYLNRPDLTAERFIALRLYRTGDLARPLADGALEYLGRKDSQVKIRGFRIELGEIEAALAEQP 642 (642)
T ss_pred hhhhhcCChhhhHHHhhhccCccCCCeeeECCCCeEEEeccccceeEeceEecCcHHHHHHHhcCC
Confidence 9999999999999999775 9999999999999999999999999999999999999999998765
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=100.00 E-value=2.3e-38 Score=314.37 Aligned_cols=287 Identities=22% Similarity=0.211 Sum_probs=224.4
Q ss_pred CceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCC--CcEEEEcCCccchhhHHHHHH-HHHhcceEEEeccCC
Q 008342 195 WQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNE--GAVFLWTLPMFHGNGWSYTWS-LAALCGTSICLRQVT 271 (569)
Q Consensus 195 ~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~--~d~~~~~~p~~~~~g~~~~~~-~~~~g~~~~~~~~~~ 271 (569)
+..++++|||||||.||+|.+||+++...+......+++.. .+++++.+|++|.+|+.+.+. .+..|++++....++
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~~~ 174 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAAAP 174 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCCCC
Confidence 35788999999999999999999999988877777777643 468999999999999865544 445566776667788
Q ss_pred hHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhhhcCC-eEecccccccCCCCc
Q 008342 272 AKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMSQKGF-RITHTYGLTELTGPA 350 (569)
Q Consensus 272 ~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~~~-~i~~~YG~tE~~~~~ 350 (569)
+..+++.++.+ |++.++|++++.+.+... . +++++. ++||+++++++.+.+++.+. ++++.||+||+++++
T Consensus 175 ~~~~l~~i~~~--t~~~~~P~~l~~l~~~~~----~-l~slr~-i~gGa~l~~~l~~~~~~~g~~~v~~~YG~TEt~~i~ 246 (386)
T TIGR02372 175 ASGIMRHARPG--DLIVGTPFIWEQLADLDY----R-LPGVVG-VSSGAPSTAATWRCLLAAGLARLLEVYGATETGGIG 246 (386)
T ss_pred hHHHHHhhccC--CEEEECcHHHHHHHhhCc----C-CCccee-EecCCCCCHHHHHHHHHhcccchhheeccccccccc
Confidence 88888887654 899999999999987531 2 567775 67899999999999987764 699999999998755
Q ss_pred cccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccccccCCcchhhhhhcCC
Q 008342 351 SVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGYLKNPKANEEAFANG 430 (569)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g 430 (569)
+.... ...|.+.++. ++.+ ++ +. + .|+ ..
T Consensus 247 ~~~~~----------------~~~~~~~p~~-~~~~--~~-~~----------~---~g~------------------~~ 275 (386)
T TIGR02372 247 LREAP----------------DDPFRLLPDL-ACFA--DT-LS----------S---AGL------------------AR 275 (386)
T ss_pred cccCC----------------CCCcccCCCc-cccC--CC-cc----------C---CCc------------------cc
Confidence 43211 1234455544 2221 11 10 0 011 12
Q ss_pred eeecCceeEEcCCCeEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcchhhh
Q 008342 431 WFHSGDLAVKHPDNYIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADELDK 510 (569)
Q Consensus 431 ~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~ 510 (569)
|++|||+++++++|++++.||.||+|+++|++|+|.+||+.|.+||.|.+++|.. .++.+.++|++.++...
T Consensus 276 ~~~tgD~g~~d~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~~p~V~~~~v~~-----~g~~~~a~vv~~~~~~~--- 347 (386)
T TIGR02372 276 RLDLQDRLAWDKDGGFTILGRKDEILQVGGVNVSPGHVRDILERNPRVRAAAVRL-----DGRRLKAFIVVAEDADE--- 347 (386)
T ss_pred eeecCceEEEcCCCcEEEecccCCEEEECCEEEcHHHHHHHHHcCCCceEEEEEc-----CCceEEEEEEECCCCCh---
Confidence 5889999999999999999999999999999999999999999999999998853 35678888888754322
Q ss_pred hhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCccc
Q 008342 511 GKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQ 548 (569)
Q Consensus 511 ~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~ 548 (569)
....++|.++++++++.|++|..+.+.+ ||+|++||++
T Consensus 348 ~~~~~~l~~~~~~~L~~~~~P~~i~~~~~lP~t~~GKi~ 386 (386)
T TIGR02372 348 AELEIELRATAARHLPAPARPDRFRFGTELPRTGAGKLA 386 (386)
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEcccCCCCCCCCcC
Confidence 1245789999999999999999999877 9999999985
No 123
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=100.00 E-value=1.2e-36 Score=310.29 Aligned_cols=323 Identities=19% Similarity=0.185 Sum_probs=237.2
Q ss_pred CcCceEEEEeccCCCCCCcceeecchHHHHHHHHh---HhHhCCCCCcEEEEcCCccchhh-HHHHHHHHHhcceEEEec
Q 008342 193 DEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNG---ALIWGMNEGAVFLWTLPMFHGNG-WSYTWSLAALCGTSICLR 268 (569)
Q Consensus 193 ~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~---~~~~~~~~~d~~~~~~p~~~~~g-~~~~~~~~~~g~~~~~~~ 268 (569)
..++.+.+++||||||.||++.++|.++....... ...+++.++|++++..++.+..+ +...+.....|++++.+.
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 152 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPIS 152 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecC
Confidence 44578889999999999999999999986654332 33468889999988766544333 333344455677777666
Q ss_pred cCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCC-CcccceeeeecCCCCCHHHHHHhhh-cCCeEecccccccC
Q 008342 269 QVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTIL-PLTNVVNVNTAGAPPPPSLLFAMSQ-KGFRITHTYGLTEL 346 (569)
Q Consensus 269 ~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~-~l~~l~~~~~~g~~l~~~~~~~~~~-~~~~i~~~YG~tE~ 346 (569)
..+++.+++.|++++||++.++|+++..|++........ ...++|.++++|+++++++.+.+.+ +|+++++.||+||+
T Consensus 153 ~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~g~~v~~~YG~tE~ 232 (422)
T TIGR02155 153 GGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARLGMKATDIYGLSEV 232 (422)
T ss_pred CCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHhCCceEecccchhh
Confidence 677899999999999999999999999888654322211 1358999999999999999999884 49999999999998
Q ss_pred CC--CccccccCCCCCCCCchhhhhccccCCceee--ccCCceeeeCCCCcccCCCCCceEEEEEecCcccccccCCcch
Q 008342 347 TG--PASVCAWKPEWDSLPFETQARLNARQGVRTI--CLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGYLKNPKA 422 (569)
Q Consensus 347 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~--~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~ 422 (569)
++ +...|.. ...|.+++ .+ .++|+|++++++++.| +.|||++++..
T Consensus 233 ~~~~~~~~~~~----------------~~~g~~~~~~~~-~~eivd~~~g~~v~~G--e~Gelvvt~~~----------- 282 (422)
T TIGR02155 233 IGPGVAMECVE----------------TQDGLHIWEDHF-YPEIIDPHTGEVLPDG--EEGELVFTTLT----------- 282 (422)
T ss_pred cCCceeecccc----------------cCCCceEecCee-EEEEECCCCCCCCCCC--CeeEEEEecCC-----------
Confidence 53 2222210 01122332 23 4789998789999888 78999999742
Q ss_pred hhhhhcCCeeecCceeEEcCC-C-----eEEEecccCceEEeCceeechHHHHHHHhcCCCceeeEEEeecCCCCCceee
Q 008342 423 NEEAFANGWFHSGDLAVKHPD-N-----YIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVLEAAVVARPDERWGESPC 496 (569)
Q Consensus 423 ~~~~~~~g~~~tGD~~~~~~~-g-----~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~ 496 (569)
...|..+||+|||+++++++ | .+++.||.+|+|+++|.+|+|.+||.+|.++|.|....++........+.+.
T Consensus 283 -~~~~p~~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~~~v~~~~q~~~~~~~~~~~~~ 361 (422)
T TIGR02155 283 -KEALPVIRYRTRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKMDELSPHYQLELTRNGHMDELT 361 (422)
T ss_pred -ccccceeeEEcCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHHHhCcCcCCCEEEEEEcCCCccEEE
Confidence 23345679999999999875 4 4689999999999999999999999999999999844444444444455677
Q ss_pred EEEEecCCcc----hhhhhhHHHHHHHHHHhcCCCCcCCceEEec---cCCCCCCCcccHH
Q 008342 497 AFVTLKPEAD----ELDKGKLAEDVSKFCRAKMPSYWVPKSVVFA---ALPKSATGKIQKH 550 (569)
Q Consensus 497 ~~v~~~~~~~----~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~---~lP~t~~GKi~r~ 550 (569)
+.++...+.. .++.....++|.+.+++.+..+. .+.+. +||+|+ ||+.|.
T Consensus 362 ~~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~v~~~~~~~lp~~~-GK~~~~ 418 (422)
T TIGR02155 362 LKVELKPESYTLRLHEQASLLAGEIQHTIKQEVGVSM---DVHLVEPGSLPRSE-GKARRV 418 (422)
T ss_pred EEEEEecCcccccchHHHHHHHHHHHHHHHhccCcEE---EEEEECCCCccCCC-CCceEE
Confidence 7777664431 12223346788889988887653 24433 399988 999863
No 124
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.3e-32 Score=288.33 Aligned_cols=505 Identities=18% Similarity=0.145 Sum_probs=331.2
Q ss_pred CHHHHHHHhhhhCCCceeeeeC---C-----eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhh
Q 008342 21 TPLWFINRAATLHPTRKSVVYG---S-----KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPM 92 (569)
Q Consensus 21 ~l~~~l~~~a~~~p~~~a~~~~---~-----~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 92 (569)
++...+.+.+...|...+..+- + ..+||++.+..++.+++.|...|..+|+.|++++..+.++++..++.++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~~~~ 116 (1032)
T KOG1178|consen 37 TLEDSFRRELAEAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFAVLA 116 (1032)
T ss_pred chhhHHHHHHhhcccCCCceEeecccccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeeehhh
Confidence 5666788888888888776542 1 6899999999999999999999999999999999999999999999999
Q ss_pred cCceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcch
Q 008342 93 AGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGA 172 (569)
Q Consensus 93 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 172 (569)
.|..+++++|.++.-++...+........-..-+....++ ........ ......+. ...
T Consensus 117 ~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~~~l~-i~~~~~~~---~~~~~sv~-----------------~~~ 175 (1032)
T KOG1178|consen 117 AGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIVRRLN-IIDILLNS---LFPKLSVE-----------------TIA 175 (1032)
T ss_pred cceEEEEecCCCcccccchHHHhhhhhheeccceehhhhh-hHHHHhhc---cccccchh-----------------hcc
Confidence 9999999999999211111111111101111111111111 11100000 00000000 001
Q ss_pred hhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHH
Q 008342 173 IEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWS 252 (569)
Q Consensus 173 ~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~ 252 (569)
..|..+...... ......-++..+++.||||+||.||+|..+|..++....+....+..+..+++-.....+......
T Consensus 176 ~~f~~~~~~~~~--r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~~t~s~~~~~~~~~~~~d~i~ 253 (1032)
T KOG1178|consen 176 DSFQMVLHNEDT--REIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFPPTGSDRFTFKTSVYFDDTIQ 253 (1032)
T ss_pred chhhhhhccCCC--cceeeecccccceEeecccccccccccchhHHHHHhhhhhccccCCcCccchhhhhheeecccchH
Confidence 112222211111 111224566788999999999999999999999999999988888888888763233332333334
Q ss_pred HHHHHHHhcceEEEe-cc---CChHHHHHHHHhcCccEEeehHHHHHHHHccCCCC---------CCC---Ccccceeee
Q 008342 253 YTWSLAALCGTSICL-RQ---VTAKAVYTAIATHGVTHFCAAPVVLNAIANASPED---------TIL---PLTNVVNVN 316 (569)
Q Consensus 253 ~~~~~~~~g~~~~~~-~~---~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~---------~~~---~l~~l~~~~ 316 (569)
..+.++++.+..+.. .. .++.++.+.+++++++..+.+|++.+.++...... ..+ ..+.|+...
T Consensus 254 ~~~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~Lkl~~ 333 (1032)
T KOG1178|consen 254 KFIGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKRSCLKLVV 333 (1032)
T ss_pred HHHhhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccchhheeee
Confidence 444555555554444 22 34789999999999999999999988777665442 001 134799999
Q ss_pred ecCCCCCHHHHHHhhhc---CCeEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceee--c--cCCceeeeC
Q 008342 317 TAGAPPPPSLLFAMSQK---GFRITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTI--C--LDGLDVIDA 389 (569)
Q Consensus 317 ~~g~~l~~~~~~~~~~~---~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~--~--~~~~~i~d~ 389 (569)
.+|++..-++...+... ++.... |++++..+.+......+.-.. ........++.-.. + . ..++...
T Consensus 334 ~~~ep~~v~l~~s~~~~~~~~~~~~~-y~s~~~~~~~s~~~~~~s~~l----l~~~~v~~~p~~~~~~~~~~-~~~~~~~ 407 (1032)
T KOG1178|consen 334 LGGEPLLVSLYTSTFDLLAEIFFGLP-YLSTDPTGLVSYDDFSPSKVL----LTNENVYSVPKFDSIIGSLT-VLESLYR 407 (1032)
T ss_pred ecCCccchhhhhhhhhcccceeeeec-ccCCCCccceeHHhhCcccce----ecceeEEeccchhhccCCCc-ceeeeec
Confidence 99999999888754433 222222 888888766654432221100 00000111111111 0 0 1222222
Q ss_pred CCCcccCCC--CCceEEEEEecCcccccccCCcchhhhhh------cCCeeecCceeEEcCCCeEEEecccCceEEeCce
Q 008342 390 RTNQPVPAD--GKTIGEIVMRGSCVMKGYLKNPKANEEAF------ANGWFHSGDLAVKHPDNYIEIKDRLKDVIISGGE 461 (569)
Q Consensus 390 ~~~~~~~~~--~~~~Gel~v~~~~~~~gy~~~~~~~~~~~------~~g~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~ 461 (569)
. +.+.+.+ .++.|+-+-.+.++..| +..++.....+ .+.+|+|||.|+.-++|.+.+.||.|++||.+|.
T Consensus 408 ~-~~~~~~~v~~~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~d~~~~r~y~tgD~gr~l~ng~l~~~GR~d~qIK~rG~ 485 (1032)
T KOG1178|consen 408 A-GGEGEGGVGKGCLGAEQNLSSWVVDG-YSTPENFLPNFLTVDGVKARIYRTGDNGRSLKNGGLEISGRADRQIKDRGV 485 (1032)
T ss_pred c-CcccCCcccceeecccccccceeecc-ccchhhcCCcccccccchhhcccccccceeecCCCEEEEEeccceEEEccE
Confidence 2 3333222 11222222223333344 22222222222 2448999999999889999999999999999999
Q ss_pred eechHHHHHHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CC
Q 008342 462 NISSVEVEKVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LP 540 (569)
Q Consensus 462 ~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP 540 (569)
++...+|+..+..+|.|.++.+....+...++++.+|++........ ....|++++..+|+.|++|+.+++.+ +|
T Consensus 486 Ri~L~ei~t~v~~~p~v~~~itl~~~~~~~~~~l~aFvv~~~~~~~~----~~~~i~~~l~~~La~y~vPs~~V~l~~vP 561 (1032)
T KOG1178|consen 486 RIELGELNTVVEVHPDVKEAITLARENSTVGQTLLAFVVERGGSKSV----LIRDIRNYLKKELASYMLPSLVVPLAKVP 561 (1032)
T ss_pred EEehhhhchhhccCcchhhhheeeeeccccCceEEEEEeccCCCCch----hHHHHHHhhcccccceecceEEEEhhhCC
Confidence 99999999999999999999999999988899999999988776543 57889999999999999999888777 99
Q ss_pred CCCCCcccHHHHHHHHHhcC
Q 008342 541 KSATGKIQKHLLRAKAKEMG 560 (569)
Q Consensus 541 ~t~~GKi~r~~l~~~~~~~~ 560 (569)
+|++||+|+++|.+......
T Consensus 562 l~~~GKvDkkaL~~~~s~~~ 581 (1032)
T KOG1178|consen 562 LNPNGKVDKKALLEYNSKLT 581 (1032)
T ss_pred cCCCCCcChhhhhhhhhhhc
Confidence 99999999999998555443
No 125
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=100.00 E-value=8.2e-30 Score=260.39 Aligned_cols=513 Identities=15% Similarity=0.151 Sum_probs=349.2
Q ss_pred cCHHHHHHHhhhhCCCceeeeeCC------eeeeHHHHHHHHHHHHHHHHhc-CCCCCCEEEEEcCCchhHHHHHHHhhh
Q 008342 20 LTPLWFINRAATLHPTRKSVVYGS------KHYTWHQTYRRCRRFASALSKL-SIGLGTTVSVIAPNVPAMYEAQFGAPM 92 (569)
Q Consensus 20 ~~l~~~l~~~a~~~p~~~a~~~~~------~~~Ty~el~~~~~~la~~L~~~-g~~~g~~V~i~~~~~~~~~~~~lA~~~ 92 (569)
.++.++|+..+..+|+.+|+...+ .++||++|..++.+++..|+.. -+++||.|++++++++|++++++||+.
T Consensus 770 ~~ile~Lq~R~a~tp~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cly 849 (1363)
T KOG3628|consen 770 LTILEILQWRAAKTPDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACLY 849 (1363)
T ss_pred HHHHHHHHHHhhcCCCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHHh
Confidence 689999999999999999998754 7899999999999999999975 479999999999999999999999999
Q ss_pred cCceEeeccccCC------HHHHHHHHhcCCceEEEEcccchHHHHH--HHHHHhhhcCCCCCcCeEEEecCCCcchhhh
Q 008342 93 AGAVLNSINIRLN------ATVVAFILSHASSAVVIVDQEFFSLAEE--ALKMMEANSEGKLKTPHLIVIGDESCDSKQL 164 (569)
Q Consensus 93 ~G~~~v~l~~~~~------~~~l~~~l~~~~~~~vi~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 164 (569)
+|++++|+.|.-. -..+..+++.+++..|+++......++. +..+.... -.+.++++++..
T Consensus 850 ~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s-----~~p~i~~~~~~~------ 918 (1363)
T KOG3628|consen 850 LGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQS-----AIPLILVLPKLP------ 918 (1363)
T ss_pred cCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhh-----cchhhhcccccc------
Confidence 9999999987533 4667889999999999999876554432 22222100 122233333221
Q ss_pred HHhhhcchhhHHhhhhcCCC--CCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEc
Q 008342 165 EYALARGAIEYEKFLETGDP--EFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWT 242 (569)
Q Consensus 165 ~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~ 242 (569)
.++..-...-.. ......-.....+|++-+.--++|.--++.++|.++++.++.....+.+.+..-++..
T Consensus 919 --------~t~~k~~~~~~k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~rpl~~~ 990 (1363)
T KOG3628|consen 919 --------ETIRKRKKNIKKLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKSRPLLGC 990 (1363)
T ss_pred --------hhhhhhhhhhhccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccCCceEEE
Confidence 001111111111 1111122466789999998889999999999999999999999999988888888888
Q ss_pred CCccchhhHHHHH-HHHHhcceEEEecc----CChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccc-----
Q 008342 243 LPMFHGNGWSYTW-SLAALCGTSICLRQ----VTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNV----- 312 (569)
Q Consensus 243 ~p~~~~~g~~~~~-~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l----- 312 (569)
.+.+-+.|+.... +..+.|...+++++ .++..+++.|+++++.-++.+=..+....+........ ++..
T Consensus 991 ~~~~sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~en-l~~~gnn~s 1069 (1363)
T KOG3628|consen 991 SSPYSGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVEN-LSKRGNNTS 1069 (1363)
T ss_pred ecCccchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccch-hhhhhcccc
Confidence 8887777775444 44455666666643 57899999999999999998888888777654433211 2211
Q ss_pred -eeeeecCCCCCHHHHHHhh----hcCC---eEecccccccCCCCccccccCCC----C-CC--CCc---hh------hh
Q 008342 313 -VNVNTAGAPPPPSLLFAMS----QKGF---RITHTYGLTELTGPASVCAWKPE----W-DS--LPF---ET------QA 368 (569)
Q Consensus 313 -~~~~~~g~~l~~~~~~~~~----~~~~---~i~~~YG~tE~~~~~~~~~~~~~----~-~~--~~~---~~------~~ 368 (569)
..++..-+...-.+.+-+. ..|. .+.-.|++.=-..++.....+++ + +. +.. .. ..
T Consensus 1070 ~s~vv~~~~RPr~ali~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~ 1149 (1363)
T KOG3628|consen 1070 SSIVVPAEERPRIALIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHS 1149 (1363)
T ss_pred cceeeecCCccHHHHHHHHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCc
Confidence 1122223333333333332 2232 13333433211111111000000 0 00 000 00 00
Q ss_pred hccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccccccCCcc-hhhhhh----------cCCeeecCce
Q 008342 369 RLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGYLKNPK-ANEEAF----------ANGWFHSGDL 437 (569)
Q Consensus 369 ~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~-~~~~~~----------~~g~~~tGD~ 437 (569)
...-.-|...+.+ ++.|+++++..+|..| +.||||+.|.+.+.+|+...+ .....| ..+|.||||+
T Consensus 1150 l~L~dSG~~~~~~-~i~IvnPEtk~pc~dg--e~GEIW~~S~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~L 1226 (1363)
T KOG3628|consen 1150 LLLYDSGKLPVYT-DIAIVNPETKGPCRDG--ELGEIWVNSAHNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGDL 1226 (1363)
T ss_pred cccccCCcccccc-eeEEeCCccccccccC--CcceEEeccccccccccccCchhhhhhhhhhccccccccccceeeeee
Confidence 0011136667777 5999999999999888 899999999999888875422 222223 2359999999
Q ss_pred eEEcC------C----CeEEEecccCceEEeCceeechHHHHHHHh-cCCCceeeEEEeecCCCCCceeeEEEEecCCcc
Q 008342 438 AVKHP------D----NYIEIKDRLKDVIISGGENISSVEVEKVLY-LHPLVLEAAVVARPDERWGESPCAFVTLKPEAD 506 (569)
Q Consensus 438 ~~~~~------~----g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~-~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~ 506 (569)
|++.. . ..+|++|-.++.+.++|.+.+|.+||..+. .||.|.+|+|+...+ .+++.+++..++.
T Consensus 1227 GFl~~t~~t~~~~e~~~~LyVlG~i~EtlEl~GL~h~p~DIE~TV~~vH~~I~~cavF~~~g-----lvVvviE~~gq~~ 1301 (1363)
T KOG3628|consen 1227 GFLRRTSLTDANVERHDLLYVLGAIDETLELNGLRHFPSDIETTVERVHPSIGGCAVFQATG-----LVVVVIECHGQQE 1301 (1363)
T ss_pred eeeeeeecccccceeeeeEEEeecccceeeecCcccCcchHHHHHHHhcccccceeeEeeCC-----eEEEEEEecCchh
Confidence 99853 1 359999999999999999999999998885 579999999997643 3666666665322
Q ss_pred hhhhhhHHHHHHHHHHhcCCCCcCCce-EEecc---CCCCCCCcccHHHHHHHHHhcCCccccc
Q 008342 507 ELDKGKLAEDVSKFCRAKMPSYWVPKS-VVFAA---LPKSATGKIQKHLLRAKAKEMGPVKMIK 566 (569)
Q Consensus 507 ~~~~~~~~~~l~~~~~~~l~~~~~p~~-i~~~~---lP~t~~GKi~r~~l~~~~~~~~~~~~~~ 566 (569)
..+-+--.++..|.+|.+... +.|++ +|+++.|..+|..+++.|.+++..-++.
T Consensus 1302 ------~~~LvPlIv~~vL~eH~iI~dvV~fV~~G~~p~~~~gEK~R~~I~~~w~~~kL~~~~v 1359 (1363)
T KOG3628|consen 1302 ------LADLVPLIVNVVLEEHYIILDVVAFVDKGVFPRNSRGEKQRAHILDSWLAGKLDPIYV 1359 (1363)
T ss_pred ------HhhhhHHHHHHHHhhcceEEEEEEEecCCccccCCchhhHHHHHHHHHHhcccceeee
Confidence 233333344555667666654 44776 9999999999999999999888765543
No 126
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.97 E-value=6.3e-30 Score=260.72 Aligned_cols=322 Identities=16% Similarity=0.101 Sum_probs=216.1
Q ss_pred CcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhH---hCCCCCcEEEEcCCccchhhHHHHHHH-HHhcceEEEec
Q 008342 193 DEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALI---WGMNEGAVFLWTLPMFHGNGWSYTWSL-AALCGTSICLR 268 (569)
Q Consensus 193 ~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~-~~~g~~~~~~~ 268 (569)
..++++.+++||||||.||+|.+||.++.......... .++.++|+++...+..+..+....... ...|+++ +..
T Consensus 84 ~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~v-i~~ 162 (445)
T TIGR03335 84 DWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSI-IPE 162 (445)
T ss_pred CHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEE-EcC
Confidence 45688899999999999999999999987766554443 488999999999888766555444333 3445544 332
Q ss_pred cCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCC-CcccceeeeecCCCCCHHHHHHhhh-cCCeEecccccccC
Q 008342 269 QVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTIL-PLTNVVNVNTAGAPPPPSLLFAMSQ-KGFRITHTYGLTEL 346 (569)
Q Consensus 269 ~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~-~l~~l~~~~~~g~~l~~~~~~~~~~-~~~~i~~~YG~tE~ 346 (569)
. .....++.|+++++|.+.++|+.+..|+......... ...++|.+++||+++++++.+++.+ +|+++++.||+||+
T Consensus 163 ~-~~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~g~~v~~~YG~TE~ 241 (445)
T TIGR03335 163 G-KCTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELWGCEVYNTYGSTEG 241 (445)
T ss_pred C-chhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHhCCcEEecCChhhh
Confidence 2 2346789999999999999999888777643322211 1468999999999999999988874 49999999999998
Q ss_pred CCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCccc-----ccccCCcc
Q 008342 347 TGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVM-----KGYLKNPK 421 (569)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~-----~gy~~~~~ 421 (569)
+ ++..|.... ....+.+.+ .++|+|++++.++|.| +.|||++|+-+.. ...+
T Consensus 242 ~-~~~~c~~~~---------------g~h~~~d~~-~vEIvDp~~~~~vp~G--e~GELvvT~L~~~~~r~~~Pli---- 298 (445)
T TIGR03335 242 T-MCGECQAVA---------------GLHVPEDLV-HLDVYDPRHQRFLPDG--ECGRIVLTTLLKPGERCGSLLI---- 298 (445)
T ss_pred h-heEEecCCC---------------CccccCCce-EEEEEcCCCCCCCcCC--CceEEEEEecCCCCccCCceEE----
Confidence 6 333332111 111222334 5899999988889988 8999999986431 1112
Q ss_pred hhhhhhcCCeeecCceeEEc-CC----C----eEEEecccCceEEeCceeechHHHHHHHhcC---CCce-eeEEEeecC
Q 008342 422 ANEEAFANGWFHSGDLAVKH-PD----N----YIEIKDRLKDVIISGGENISSVEVEKVLYLH---PLVL-EAAVVARPD 488 (569)
Q Consensus 422 ~~~~~~~~g~~~tGD~~~~~-~~----g----~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~---~~v~-~~~v~~~~~ 488 (569)
.|+|||++++. ++ | ++...||.||+++++|.+|+|.+||++|.++ +++. +..++....
T Consensus 299 ---------RYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~~~~~~~~~~~~~~~~ 369 (445)
T TIGR03335 299 ---------NYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQRENMDSLTGEYEAFLYGE 369 (445)
T ss_pred ---------EeecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccCCCCCCCccEEEEEecC
Confidence 39999999873 22 2 2445799999999999999999999999995 5554 445544333
Q ss_pred CCCCceeeEEEEecCCcchhhhhhHHHHHHHH-------HHhcCCCCcCCceEEecc---CCCC-CCCcccH
Q 008342 489 ERWGESPCAFVTLKPEADELDKGKLAEDVSKF-------CRAKMPSYWVPKSVVFAA---LPKS-ATGKIQK 549 (569)
Q Consensus 489 ~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~-------~~~~l~~~~~p~~i~~~~---lP~t-~~GKi~r 549 (569)
......+.+.++..+.... +.+...+++.+. +++.+....+...+.+++ ||++ +.||..|
T Consensus 370 ~~~~~~~~v~~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~r 440 (445)
T TIGR03335 370 EEGEITLRVSLECEDKDNC-SIHDIQENFTGTFLKYKPELIGSYDEGIFQILVNFTGPGELELHKIKGRPKR 440 (445)
T ss_pred CCCCceEEEEEEecCcccc-hHHHHHHHHHHHHhhhhhhhhhhhhcceEEEEEEEeCCCCccccccCCCcee
Confidence 2223356666666554321 111122333332 111121222333344443 9998 4688765
No 127
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.96 E-value=9.8e-28 Score=231.10 Aligned_cols=323 Identities=20% Similarity=0.235 Sum_probs=232.7
Q ss_pred CCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhH---hCCCCCcEEEEcCCcc-chhhHHHHHHHHHhcceEEEe
Q 008342 192 EDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALI---WGMNEGAVFLWTLPMF-HGNGWSYTWSLAALCGTSICL 267 (569)
Q Consensus 192 ~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~---~~~~~~d~~~~~~p~~-~~~g~~~~~~~~~~g~~~~~~ 267 (569)
...++...|-.||||||+|+.+.+|+..+..++....+. .+...+|++..+.... +..|+..-..+--.|.+++..
T Consensus 87 ~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~ 166 (438)
T COG1541 87 VPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPI 166 (438)
T ss_pred ccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEcc
Confidence 345566779999999999999999999987776665554 4788999987665521 222222222333355555555
Q ss_pred ccCChHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCC-CcccceeeeecCCCCCHHHHHHhh-hcCCeEeccccccc
Q 008342 268 RQVTAKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTIL-PLTNVVNVNTAGAPPPPSLLFAMS-QKGFRITHTYGLTE 345 (569)
Q Consensus 268 ~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~-~l~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~YG~tE 345 (569)
..-+-+.-+++++++++|++.++|+.+..|+......... .-.+++.+++|+|+.++++++.+. .+|+.+++.||+||
T Consensus 167 ~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~g~~~~diYGltE 246 (438)
T COG1541 167 SGGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRFGCKAFDIYGLTE 246 (438)
T ss_pred CCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHhCCceeecccccc
Confidence 5567789999999999999999999999999887665311 145899999999999999999999 55999999999999
Q ss_pred CCCCc-cccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccccccCCcchhh
Q 008342 346 LTGPA-SVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGYLKNPKANE 424 (569)
Q Consensus 346 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~ 424 (569)
..+.. ..|..... ....-+.+ .++|+|+++++.++.| +.|||++|.-..
T Consensus 247 ~~g~g~~eC~~~~g---------------lhi~eD~~-~~Ei~dP~t~e~l~dg--e~GelV~T~L~~------------ 296 (438)
T COG1541 247 GFGPGAGECTERNG---------------LHIWEDHF-IFEIVDPETGEQLPDG--ERGELVITTLTK------------ 296 (438)
T ss_pred ccCCcccccccccC---------------CCcchhhc-eeeeecCCcCccCCCC--CeeEEEEEeccc------------
Confidence 98773 55543321 11122233 6999999999999998 789999998531
Q ss_pred hhhcCCeeecCceeEEcCC----C-----eEEEecccCceEEeCceeechHHHHHHHhcCCCce-eeEEEeecCCCCCce
Q 008342 425 EAFANGWFHSGDLAVKHPD----N-----YIEIKDRLKDVIISGGENISSVEVEKVLYLHPLVL-EAAVVARPDERWGES 494 (569)
Q Consensus 425 ~~~~~g~~~tGD~~~~~~~----g-----~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~-~~~v~~~~~~~~g~~ 494 (569)
..+.-=.|+|||++.+.++ | ...+.||+||++.+.|.+|+|..||.+|.+.+.+. +.+++... ++..+.
T Consensus 297 ~~~PlIRYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~~~~~yqi~~~~-~~~~d~ 375 (438)
T COG1541 297 EGMPLIRYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPEVTPHYQIILTR-NGGLDE 375 (438)
T ss_pred cCcceEEEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhcccCCCceEEEEEec-CCCCce
Confidence 1111113999999999864 2 25699999999999999999999999999999998 77777666 555567
Q ss_pred eeEEEEecCCcch-hhhhhHHHHHHHHHHhcCCCCcCCceEEecc---CCCCCCCcccH
Q 008342 495 PCAFVTLKPEADE-LDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA---LPKSATGKIQK 549 (569)
Q Consensus 495 ~~~~v~~~~~~~~-~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~---lP~t~~GKi~r 549 (569)
+.+.|++.++... .+...+..++.+.+...+. ....+.++. +|+|. ||..|
T Consensus 376 L~V~vE~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~v~~v~~g~l~r~~-~K~kr 430 (438)
T COG1541 376 LTVRVELENEAEELEDERRLAKKLIKNIKSELG---VRVEVELVEPGELPRTE-GKAKR 430 (438)
T ss_pred EEEEEEecCcccchHHHHHHHHHHHHHHHhhcC---CceEEEEEeccceeccc-CceeE
Confidence 8888888765221 1111123445555554443 333444443 99995 46543
No 128
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.94 E-value=6.9e-26 Score=208.32 Aligned_cols=218 Identities=13% Similarity=0.093 Sum_probs=163.1
Q ss_pred HHHhhhhCCCceeeeeC-C-----eeeeHHHHHHHHHHHHHHHHh-cCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEe
Q 008342 26 INRAATLHPTRKSVVYG-S-----KHYTWHQTYRRCRRFASALSK-LSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLN 98 (569)
Q Consensus 26 l~~~a~~~p~~~a~~~~-~-----~~~Ty~el~~~~~~la~~L~~-~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (569)
|+..++.+|+++|+++. + +++||+||.++++++|++|.+ .|+++||+|+|+++|++++++++|||+++|++++
T Consensus 2 ~~~~~~~~p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~v 81 (227)
T TIGR03089 2 LSPLLAADPASPRLTFYDDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVV 81 (227)
T ss_pred hhhhhhhCCCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEE
Confidence 57788899999999753 2 369999999999999999998 7999999999999999999999999999999999
Q ss_pred eccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcchhhHHhh
Q 008342 99 SINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGAIEYEKF 178 (569)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (569)
|++ .+++++++++++....... ...++.+......... ......+..+|.+.
T Consensus 82 p~n-------------~s~a~~~v~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 133 (227)
T TIGR03089 82 LAG-------------DPDADVVVTGPDRLAAAAG--------------SGEVVALSLDPLGRRV-AGELPPGVIDFAPE 133 (227)
T ss_pred eCC-------------CCCCCEEEeCcchhhhccc--------------CCceEEEeccccccCC-CCCCCCcccchhhh
Confidence 995 6789999999876555320 1233333211000000 00001233466666
Q ss_pred hhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhHhCCCCCcEEEEcCCccchhhHHH-HHHH
Q 008342 179 LETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALIWGMNEGAVFLWTLPMFHGNGWSY-TWSL 257 (569)
Q Consensus 179 l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~-~~~~ 257 (569)
+..............++|++.++||||+ +|++++... ...+++++|+++ .+|++|.+|+.. .+..
T Consensus 134 ~~~~~~~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~ 199 (227)
T TIGR03089 134 VRVHGDQFAPYEPPDATAPALVAGGGEW---------TGAELVAAA----RAAGLPPGDRVL-VLAWTDLEDFLATLLAP 199 (227)
T ss_pred hhccCCCCCCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhcCCCCCCeEE-ecCCCchHHHHHHHHHH
Confidence 6543332222113456899999999986 566655544 566789999999 999999999965 5556
Q ss_pred HHhcceEEEeccCChHHHHHHHHhcCcc
Q 008342 258 AALCGTSICLRQVTAKAVYTAIATHGVT 285 (569)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~i~~~~~t 285 (569)
+..|+++++.++|++..+++.|+++|||
T Consensus 200 l~~G~t~v~~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 200 LAAGGSLVLVTHPDPARLDQIAETERVT 227 (227)
T ss_pred hccCceEEEecCCCHHHHHHHHHhhcCC
Confidence 6678888888999999999999999987
No 129
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.85 E-value=5.3e-21 Score=185.73 Aligned_cols=119 Identities=20% Similarity=0.248 Sum_probs=107.8
Q ss_pred hhcCCeeecCceeEE-cCCCeEEEecccCceEEeCc---eeechHHHHHHHhcCCCceeeEEEeecCCCCCceeeEEEEe
Q 008342 426 AFANGWFHSGDLAVK-HPDNYIEIKDRLKDVIISGG---ENISSVEVEKVLYLHPLVLEAAVVARPDERWGESPCAFVTL 501 (569)
Q Consensus 426 ~~~~g~~~tGD~~~~-~~~g~l~~~GR~~d~i~~~G---~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~ 501 (569)
.|.+|||+|||+|++ |++|+++|.||.+ +| ++|+|. ||++|.+||+|.+|+|++.+++.+|+.+.|+|++
T Consensus 205 ~~~dgW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~hp~V~eaaVvgvpd~~~ge~v~A~Vv~ 278 (365)
T PRK09188 205 LPSRIWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKSDPAVSDVAIALFSLPAKGVGLYAFVEA 278 (365)
T ss_pred cccCcEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH-HHHHHHhCCCccEEEEEEEEcCCCCeEEEEEEEE
Confidence 346899999999998 6999999999998 78 799999 9999999999999999999999999999999987
Q ss_pred cCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEEecc-CCCCCCCcccHHHHHHHHHh
Q 008342 502 KPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVVFAA-LPKSATGKIQKHLLRAKAKE 558 (569)
Q Consensus 502 ~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~ 558 (569)
.... +.++|.++|+++|+. ++|..+.+++ ||+|++||++|++|++++.+
T Consensus 279 ~~~~-------~~~el~~~l~~~L~~-kvP~~v~~v~~lP~t~~GKi~R~~Lr~~~~~ 328 (365)
T PRK09188 279 ELPA-------DEKSLRARLAGAKPP-KPPEHIQPVAALPRDADGTVRDDILRLIAMN 328 (365)
T ss_pred CCCC-------CHHHHHHHHHhhchh-cCCcEEEEECCCCCCCCCCccHHHHHHHhhc
Confidence 6421 447899999999999 9999998877 99999999999999998743
No 130
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.82 E-value=1.6e-18 Score=178.50 Aligned_cols=500 Identities=14% Similarity=0.066 Sum_probs=319.5
Q ss_pred CHHHHHHHhhhhCCCceeeeeCC-----eeeeHHHHHHHHHHHHH-HHHhcCCCCCCEEEEEcCCc--hhHHHHHHHhhh
Q 008342 21 TPLWFINRAATLHPTRKSVVYGS-----KHYTWHQTYRRCRRFAS-ALSKLSIGLGTTVSVIAPNV--PAMYEAQFGAPM 92 (569)
Q Consensus 21 ~l~~~l~~~a~~~p~~~a~~~~~-----~~~Ty~el~~~~~~la~-~L~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~ 92 (569)
.+..+++..-.+++...|.++-+ ..+||..+..++.++|+ .|-+-|+.++|+|.++...+ .++++..++|..
T Consensus 95 d~~avl~~~~nhs~~~ta~i~id~kgk~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~gc~l 174 (1363)
T KOG3628|consen 95 DIIAVLRYRRNHSATSTAHICIDKKGKATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLFGCFL 174 (1363)
T ss_pred chHHHHHhhccCCCCCceEEEEcCCCceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhccccc
Confidence 35566666667888888887744 67999999999999999 67778999999999998877 699999999999
Q ss_pred cCceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCCcchhhhHHhhhcch
Q 008342 93 AGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDESCDSKQLEYALARGA 172 (569)
Q Consensus 93 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 172 (569)
.|.+++|+.+..+.+++..+++..+.+++++................ ..+.-+++...+. .+.
T Consensus 175 ~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~s-----~~k~v~~w~t~~~------------k~~ 237 (1363)
T KOG3628|consen 175 LGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNSPVS-----LAKAVAWWKTNDF------------KGN 237 (1363)
T ss_pred cceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCccc-----HHHHHHhhhcccc------------cce
Confidence 99999999999999999999999999999988765443332110000 0000000000000 000
Q ss_pred hhHHhhhhcCCCCCCCCCCCCcCceEEEEeccCCCCCCcceeecchHHHHHHHHhH--------------------hHhC
Q 008342 173 IEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGA--------------------LIWG 232 (569)
Q Consensus 173 ~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~--------------------~~~~ 232 (569)
+.++ ....+...-. ..+|-||++++|.--+++++|. ++.+..... ..++
T Consensus 238 ~~~~---------k~~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~ 306 (1363)
T KOG3628|consen 238 YTKD---------KIKKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFP 306 (1363)
T ss_pred eehh---------hccCCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccc
Confidence 0000 0111112222 7889999999999999999998 443332211 1224
Q ss_pred CCCCcEEEEcCCccchhhHHHHHHHHH-hcceEEEecc---CChHHHHHHHHhcCccEEeehHHHHHHHHcc-CCC----
Q 008342 233 MNEGAVFLWTLPMFHGNGWSYTWSLAA-LCGTSICLRQ---VTAKAVYTAIATHGVTHFCAAPVVLNAIANA-SPE---- 303 (569)
Q Consensus 233 ~~~~d~~~~~~p~~~~~g~~~~~~~~~-~g~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~-~~~---- 303 (569)
....+.++.........|+.+.....+ .|.|.+.+++ +.|..+..++-+++++++..--.-++..... .+.
T Consensus 307 ~~~~~~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~ 386 (1363)
T KOG3628|consen 307 VPSEDVLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKAT 386 (1363)
T ss_pred cCcccceeeccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCCcccc
Confidence 456777777788888888876655554 4556666665 6789999999999999998764444333221 111
Q ss_pred -----CCCCCcccceeeeecCCCCCHHHHHHhhh-----cCC---e---------------EecccccccCCCCcccccc
Q 008342 304 -----DTILPLTNVVNVNTAGAPPPPSLLFAMSQ-----KGF---R---------------ITHTYGLTELTGPASVCAW 355 (569)
Q Consensus 304 -----~~~~~l~~l~~~~~~g~~l~~~~~~~~~~-----~~~---~---------------i~~~YG~tE~~~~~~~~~~ 355 (569)
....+++++|.+++.-..+.++..+-..+ .|. + ...+=+.+|.+......+.
T Consensus 387 ~s~~k~~t~d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~ 466 (1363)
T KOG3628|consen 387 LSFKKYKTPDLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIRRPE 466 (1363)
T ss_pred cchhhccCCCccceeeeEEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccccCcc
Confidence 01123889999999999999877654432 221 1 1111222344322221111
Q ss_pred C----CCCCC------CC---------chhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceEEEEEecCcccccc
Q 008342 356 K----PEWDS------LP---------FETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIGEIVMRGSCVMKGY 416 (569)
Q Consensus 356 ~----~~~~~------~~---------~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy 416 (569)
. ...+. +. ........-.+|...++--.+.++++++.+.|..+ ++|||||.++++...|
T Consensus 467 ~~~~~~~~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~--eVGEIwVsS~~~~~~~ 544 (1363)
T KOG3628|consen 467 QMADTLPGEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTD--EVGEIWVSSNSLGKLF 544 (1363)
T ss_pred cccccCccceeeeccccccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccC--cceeEEEecCCcccce
Confidence 0 00000 00 00001111123444444325788999999999888 8999999999999999
Q ss_pred cCCcchhhhhhc-------------CCeeecCceeEEcCCCeEEEecccCceEE-eCceeechHH----------HHHHH
Q 008342 417 LKNPKANEEAFA-------------NGWFHSGDLAVKHPDNYIEIKDRLKDVII-SGGENISSVE----------VEKVL 472 (569)
Q Consensus 417 ~~~~~~~~~~~~-------------~g~~~tGD~~~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~----------iE~~l 472 (569)
|..+..+...|. .-+.|||-+|+++ .|.+|++|-.+|.+. ..|..++..+ ++.+.
T Consensus 545 ~al~~~t~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv~-~gki~vl~~k~d~llq~~~~~h~~d~iv~thya~~~iktV~ 623 (1363)
T KOG3628|consen 545 YALDKQTENTFKATPVESSGKPPSNVPFMRTGLLGFVH-NGKIYVLGLKEDGLLQVSGWRHNADDIVATHYAVELIKTVM 623 (1363)
T ss_pred eeccccccceEEeeeccccCCCCccchhhhhcceeeee-CCeEEEEEechhhhhhhhhhhhhhhhhHhhHHHHHHHHHHH
Confidence 998888887772 1278999999999 555666666666665 8888777655 44555
Q ss_pred hcCCCceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEE--ecc---CCCCCCCcc
Q 008342 473 YLHPLVLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVV--FAA---LPKSATGKI 547 (569)
Q Consensus 473 ~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~--~~~---lP~t~~GKi 547 (569)
+..+.|-++.++- +|+.++.++-.+....++ .-+....+-+.+...+....+. ++. ||||+-|.+
T Consensus 624 R~v~~VF~~saf~------~E~~~Vv~~esP~a~e~~----~~q~~~~v~q~l~~iHqv~vyCilivP~~tLPrt~~~Gi 693 (1363)
T KOG3628|consen 624 RGVIAVFDVSAFE------DEHIVVVVLESPDATEEN----SFQWMSRVFQALDSIHQVGVYCILIVPANTLPRTPLGGI 693 (1363)
T ss_pred hccceEEEEeeee------cceEEEEEEeCcchhhhh----hhhHHHHHHHHHHHHhcccceEEEEeccccCCCcccccc
Confidence 6667788888875 344555555555543322 2222223333333333333322 333 999999999
Q ss_pred cHHHHHHHHHhcCC
Q 008342 548 QKHLLRAKAKEMGP 561 (569)
Q Consensus 548 ~r~~l~~~~~~~~~ 561 (569)
.-..+++.|.+...
T Consensus 694 ~~~~~k~~F~~G~L 707 (1363)
T KOG3628|consen 694 HNNECKQAFLEGSL 707 (1363)
T ss_pred ccHHHHHHHHcCCC
Confidence 99999999988764
No 131
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.78 E-value=6e-17 Score=161.33 Aligned_cols=254 Identities=16% Similarity=0.120 Sum_probs=163.8
Q ss_pred eEEEEeccCCCCCCcceeecchHHHHHHHHhHhH---hCCCCCcEEEEcCCccchhhHHHHHHHHHhcce-EEEe-ccCC
Q 008342 197 SIALGYTSGTTASPKGVVVSHRGAYLMSLNGALI---WGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGT-SICL-RQVT 271 (569)
Q Consensus 197 ~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~-~~~~-~~~~ 271 (569)
...+..||||||.|-.+..+.............. .++..++++.... ++.+..+.. ...... +..+ -..+
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~---~~~~~ly~~--~~~~~~~~~~~~l~~~ 175 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFL---RADNNLYQS--VNNRWISLDFFDLLAP 175 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEE---ccChhHHHH--HHhccceeeecCCCcC
Confidence 4567789999999999999998765443332222 2455555554432 111111111 111111 1111 1246
Q ss_pred hHHHHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHHHHhh-hcCCeEecccccccCCCCc
Q 008342 272 AKAVYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLLFAMS-QKGFRITHTYGLTELTGPA 350 (569)
Q Consensus 272 ~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~YG~tE~~~~~ 350 (569)
.+.+++.|++++|+++.++|+.+..|++........ .+++.++++||.+++...+.++ .+|+++++.||+|| |.++
T Consensus 176 ~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~--~~~k~ii~~~E~l~~~~r~~Ie~~fg~~V~~~YG~tE-g~la 252 (430)
T TIGR02304 176 FQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT--IKPKKVISVAEVLEPQDRELIRNVFKNTVHQIYQATE-GFLA 252 (430)
T ss_pred HHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC--CCceEEEEccCCCCHHHHHHHHHHhCCCeeEccCCch-hheE
Confidence 789999999999999999999999999875543322 4689999999999999998888 55999999999999 6666
Q ss_pred cccccCCCCCCCCchhhhhccccCCceeeccCCce--eeeCCCCcccCCCCCceEEEEEecCcc-cccccCCcchhhhhh
Q 008342 351 SVCAWKPEWDSLPFETQARLNARQGVRTICLDGLD--VIDARTNQPVPADGKTIGEIVMRGSCV-MKGYLKNPKANEEAF 427 (569)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~--i~d~~~~~~~~~~~~~~Gel~v~~~~~-~~gy~~~~~~~~~~~ 427 (569)
+.|..+ .+.... ..+ -++ ++|++ ++ +..++|+-.. ....+
T Consensus 253 ~eC~~g-~lHl~e---------------d~~-~vE~~ivD~~-~~---------~~~ViT~L~n~~~PlI---------- 295 (430)
T TIGR02304 253 STCRCG-TLHLNE---------------DLV-HIEKQYLDEH-KR---------FVPIITDFTRTTQPIV---------- 295 (430)
T ss_pred EecCCC-CEEEcc---------------ccE-EEEeeEECCC-Cc---------eEEEEecCCCccceEE----------
Confidence 666422 111100 001 233 67765 22 4457776432 12222
Q ss_pred cCCeeecCceeEEcCC----Ce----E-EEecccCceEEe---Cc--eeechHHHHHHH-hcCCCceeeEEEeecCCCCC
Q 008342 428 ANGWFHSGDLAVKHPD----NY----I-EIKDRLKDVIIS---GG--ENISSVEVEKVL-YLHPLVLEAAVVARPDERWG 492 (569)
Q Consensus 428 ~~g~~~tGD~~~~~~~----g~----l-~~~GR~~d~i~~---~G--~~v~~~~iE~~l-~~~~~v~~~~v~~~~~~~~g 492 (569)
.|+|||++.+.++ |. + .+.||.+|++++ +| ..++|..++..+ ...+.|.+.+++....
T Consensus 296 ---RYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~yQi~Q~~~---- 368 (430)
T TIGR02304 296 ---RYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLIVEYRVLQTGS---- 368 (430)
T ss_pred ---eeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCCceEEEEEccC----
Confidence 3999999888544 22 3 388999999984 45 445999998774 4578999998876432
Q ss_pred ceeeEEEEec
Q 008342 493 ESPCAFVTLK 502 (569)
Q Consensus 493 ~~~~~~v~~~ 502 (569)
+.+.+.++..
T Consensus 369 ~~l~v~~~~~ 378 (430)
T TIGR02304 369 AQLELIADCE 378 (430)
T ss_pred CeEEEEEEeC
Confidence 2356666553
No 132
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=99.22 E-value=2.5e-11 Score=89.83 Aligned_cols=69 Identities=49% Similarity=0.817 Sum_probs=59.2
Q ss_pred HHHHHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCce--EE-ecc-CCCC
Q 008342 467 EVEKVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKS--VV-FAA-LPKS 542 (569)
Q Consensus 467 ~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~--i~-~~~-lP~t 542 (569)
|||++|.+||+|.+|+|++.+++.+|+.+++++++ ..++|.++++++|+.|++|+. ++ +.+ ||+|
T Consensus 1 EIE~~l~~~~~V~~~~V~~~~d~~~g~~l~a~vv~-----------~~~~i~~~~~~~l~~~~~P~~~~~v~~~~~lP~t 69 (73)
T PF13193_consen 1 EIESVLRQHPGVAEAAVVGVPDEDWGERLVAFVVL-----------DEEEIRDHLRDKLPPYMVPRRIRFVRLDEELPRT 69 (73)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEE-----------HHHHHHHHHHHHS-GGGS-SEEEEEEESSSEEBE
T ss_pred CHHHHHhcCCCccEEEEEEEEcccccccceeEEEe-----------eecccccchhhhCCCcceeeEEEEccccCcCCCC
Confidence 79999999999999999999999999999999998 127899999999999999944 33 346 9999
Q ss_pred CCCc
Q 008342 543 ATGK 546 (569)
Q Consensus 543 ~~GK 546 (569)
++||
T Consensus 70 ~~GK 73 (73)
T PF13193_consen 70 PSGK 73 (73)
T ss_dssp TTSS
T ss_pred CCCC
Confidence 9998
No 133
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.96 E-value=4.7e-08 Score=95.67 Aligned_cols=227 Identities=20% Similarity=0.243 Sum_probs=131.0
Q ss_pred CcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHhH---h-CCCC-CcEEEEcCCccch-hhHH---HHHHHHHhcce
Q 008342 193 DEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALI---W-GMNE-GAVFLWTLPMFHG-NGWS---YTWSLAALCGT 263 (569)
Q Consensus 193 ~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~---~-~~~~-~d~~~~~~p~~~~-~g~~---~~~~~~~~g~~ 263 (569)
.++++..++.||||||.|.-+.+.+..+..+....... + +... ...++...|-... ..+. .........++
T Consensus 87 ~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (365)
T PF04443_consen 87 PEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGS 166 (365)
T ss_pred ChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCc
Confidence 34567789999999999877777666655444333322 2 2222 2233333333211 1111 11111122333
Q ss_pred EEEec--cCChHHHHHHHH----hcCccEEeehHHHHHHHHccCCCCCCC-Ccc-cceeeeecC------CCCCH-HHHH
Q 008342 264 SICLR--QVTAKAVYTAIA----THGVTHFCAAPVVLNAIANASPEDTIL-PLT-NVVNVNTAG------APPPP-SLLF 328 (569)
Q Consensus 264 ~~~~~--~~~~~~~~~~i~----~~~~t~l~~~P~~~~~l~~~~~~~~~~-~l~-~l~~~~~~g------~~l~~-~~~~ 328 (569)
...+. .++.+.++..+. +.++..+++.|.++-.++......... .++ ..+.+-.|| +.+++ ++.+
T Consensus 167 ~~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef~~ 246 (365)
T PF04443_consen 167 RFALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEFYA 246 (365)
T ss_pred eeeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHHHH
Confidence 44443 356666666654 456888999888666555443322221 033 334444554 44654 5555
Q ss_pred Hhhh-cCC----eEecccccccCCCCccccccCCCCCCCCchhhhhccccCCceeeccCCceeeeCCCCcccCCCCCceE
Q 008342 329 AMSQ-KGF----RITHTYGLTELTGPASVCAWKPEWDSLPFETQARLNARQGVRTICLDGLDVIDARTNQPVPADGKTIG 403 (569)
Q Consensus 329 ~~~~-~~~----~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~G 403 (569)
.+.+ +|+ ++++.||+||.....+.|... ....|. -+.|.|++|..+++.| +.|
T Consensus 247 ~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~~----------------~~~~p~----wV~iRDp~tl~~~~~G--e~G 304 (365)
T PF04443_consen 247 RLQEVFGVIPIENIYDMYGMTELNSQAYECGHG----------------HFHVPP----WVIIRDPETLEPLPPG--ETG 304 (365)
T ss_pred HHHHHHCCCCHHHeeeeeeccccchhheeCCCC----------------cccCCC----eEEEECCCCCcCCCCC--Cee
Confidence 5554 477 699999999987655554211 111122 2677799999999988 889
Q ss_pred EEEEecCcccccccCCcchhhhhhcCCeeecCceeEEcCC--------CeEEEecccCc
Q 008342 404 EIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHPD--------NYIEIKDRLKD 454 (569)
Q Consensus 404 el~v~~~~~~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~~--------g~l~~~GR~~d 454 (569)
-|.+-++.... | .+..-|.|+|.+..+ .++.++||.+.
T Consensus 305 li~vidl~~~s-~------------p~~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~ 350 (365)
T PF04443_consen 305 LIQVIDLANTS-Y------------PGFILTEDLGVLHGDDDCGCRKGKYFEVLGRADG 350 (365)
T ss_pred EEEEEcccccC-C------------CcEEEEcceeeecCCCCCCCccCCEEEEEeCCCC
Confidence 99887764321 1 233569999988654 26899999774
No 134
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.62 E-value=3.9e-07 Score=94.57 Aligned_cols=89 Identities=20% Similarity=0.223 Sum_probs=60.1
Q ss_pred CceEEEEEecCcccccccCCcchhhhhhcCCeeecCceeEEcC--CC--eEEEecccCceEEeCceeechHHHHHHHhcC
Q 008342 400 KTIGEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHP--DN--YIEIKDRLKDVIISGGENISSVEVEKVLYLH 475 (569)
Q Consensus 400 ~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~--~g--~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 475 (569)
|+.-||++|.. .|.|+ |+.||++++.. ++ .+.|+||.+.++.+.|++++-.+|++++.+.
T Consensus 355 G~~YelviTt~---~GLyR-------------Y~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l~gEkl~e~~v~~av~~~ 418 (528)
T PF03321_consen 355 GEEYELVITTN---SGLYR-------------YRIGDVVRVTGFYNQTPRIEFVGRRGQVLSLFGEKLSEEQVQEAVARA 418 (528)
T ss_dssp T-EEEEEEEST---TS-SS-------------EEECEEEEEEEEETTEEEEEEEEETTEEE-SSS--EEHHHHHHHHHHH
T ss_pred CCeEEEEEecc---cceee-------------eecCCEEEEeeccCCCcEEEEeccCCceeecceeecCHHHHHHHHHHH
Confidence 36789999985 35554 99999999863 23 7999999999999999999999999998764
Q ss_pred -----CCceeeEEEeecCCCCCceeeEEEEecCC
Q 008342 476 -----PLVLEAAVVARPDERWGESPCAFVTLKPE 504 (569)
Q Consensus 476 -----~~v~~~~v~~~~~~~~g~~~~~~v~~~~~ 504 (569)
-.+.+..+...........-+.++++...
T Consensus 419 ~~~~~~~~~~f~~~~~~~~~~~~~Y~~~~e~~~~ 452 (528)
T PF03321_consen 419 LQETGLELRDFTVAPDPSSGNPPHYVLFWELEGE 452 (528)
T ss_dssp HHCTT-EEEEEEEEEE--SSSSBEEEEEEEECS-
T ss_pred HHhcCCceeeEEEEeecccCCCCceEEEEEeCCC
Confidence 24567777655322222344666776665
No 135
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=97.92 E-value=4.5e-05 Score=59.49 Aligned_cols=85 Identities=28% Similarity=0.370 Sum_probs=56.1
Q ss_pred ceeechHHHHHHHhcCCCce-eeEEEeecCCCCCceeeEEEEecCCcch--hhhhhHHHHHHHHHHhcCCCCcCCceEEe
Q 008342 460 GENISSVEVEKVLYLHPLVL-EAAVVARPDERWGESPCAFVTLKPEADE--LDKGKLAEDVSKFCRAKMPSYWVPKSVVF 536 (569)
Q Consensus 460 G~~v~~~~iE~~l~~~~~v~-~~~v~~~~~~~~g~~~~~~v~~~~~~~~--~~~~~~~~~l~~~~~~~l~~~~~p~~i~~ 536 (569)
|.+|+|..||++|.++|++. +++++.. .....+.+.+.|++.++... .+...+.++|.+.+++.+. +...+.+
T Consensus 1 GvnvfP~~Ie~vl~~~~~~~~~y~i~v~-~~~~~D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~lk~~lg---v~~~V~l 76 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFPEVSPEYQIVVT-REGGLDELTVRVELRPGFSDDAEDLEALAERIAERLKERLG---VRPEVEL 76 (96)
T ss_dssp TEEE-HHHHHHHHCTSTTEEEEEEEEEE-EETTEEEEEEEEEESTTCCTTHHHHHHHHHHHHHHHHHHHS---S-EEEEE
T ss_pred CcEECHHHHHHHHHhCcCCCCcEEEEEE-cCCCCcEEEEEEEECCccCcchHHHHHHHHHHHHHHHhhcC---ceEEEEE
Confidence 78999999999999999999 5555544 33456778888998886532 2344567788888888774 2234554
Q ss_pred cc---CCCCCCCcccH
Q 008342 537 AA---LPKSATGKIQK 549 (569)
Q Consensus 537 ~~---lP~t~~GKi~r 549 (569)
++ ||++ .||..|
T Consensus 77 v~~gtLpr~-~~K~~R 91 (96)
T PF14535_consen 77 VPPGTLPRS-EGKAKR 91 (96)
T ss_dssp E-TT-S----SSSS-S
T ss_pred ECCCCccCC-CCcceE
Confidence 43 9998 688765
No 136
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=97.81 E-value=0.0028 Score=65.82 Aligned_cols=59 Identities=14% Similarity=0.186 Sum_probs=47.9
Q ss_pred ceEEEEEecCcccccccCCcchhhhhhcCCeeecCceeEEcC----CCeEEEecccCceEEeCceeechHHHHHHHhcC
Q 008342 401 TIGEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHP----DNYIEIKDRLKDVIISGGENISSVEVEKVLYLH 475 (569)
Q Consensus 401 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~----~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 475 (569)
+.-||++|.. .|.|+ ||.||++++.. ...+.|++|.+.+..+.|+|.+-.++..++.+.
T Consensus 402 ~~YelVvTt~---~GLYR-------------YrlGDvv~V~GF~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~a 464 (606)
T PLN02247 402 HYYELVVTTF---TGLYR-------------YRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQA 464 (606)
T ss_pred CeEEEEEEec---CceEE-------------EecCCEEEEeeecCCCceEEEEecCCceeecccccCCHHHHHHHHHHH
Confidence 6789999874 24443 99999998852 357999999999999999999999998888653
No 137
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=97.78 E-value=0.0018 Score=67.90 Aligned_cols=58 Identities=12% Similarity=0.184 Sum_probs=48.4
Q ss_pred ceEEEEEecCcccccccCCcchhhhhhcCCeeecCceeEEcC----CCeEEEecccCceEEeCceeechHHHHHHHhc
Q 008342 401 TIGEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHP----DNYIEIKDRLKDVIISGGENISSVEVEKVLYL 474 (569)
Q Consensus 401 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~----~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~ 474 (569)
+.-+|+++.. .|.|+ |+.||++++.. -..+.|+||.+.++.+.|++++-.+++.++.+
T Consensus 395 ~~Y~lVvTT~---~GLyR-------------Y~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~GEKl~e~~v~~Av~~ 456 (597)
T PLN02249 395 KEYELVITTY---AGLYR-------------YRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVEN 456 (597)
T ss_pred CeEEEEEEcc---cceeE-------------eecCCEEEEeeccCCCcEEEEEccCCcceecccccCCHHHHHHHHHH
Confidence 6789999874 34453 99999999863 24799999999999999999999999998876
No 138
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=97.46 E-value=0.0055 Score=63.61 Aligned_cols=58 Identities=16% Similarity=0.176 Sum_probs=47.2
Q ss_pred ceEEEEEecCcccccccCCcchhhhhhcCCeeecCceeEEcC----CCeEEEecccCceEEeCceeechHHHHHHHhc
Q 008342 401 TIGEIVMRGSCVMKGYLKNPKANEEAFANGWFHSGDLAVKHP----DNYIEIKDRLKDVIISGGENISSVEVEKVLYL 474 (569)
Q Consensus 401 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~tGD~~~~~~----~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~ 474 (569)
+.-||+||.. .|.|+ ||.||++++.. ...+.|++|.+-+..+.|+|.+-.++..++.+
T Consensus 408 ~~YelvvTt~---~GLyR-------------YrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~ 469 (612)
T PLN02620 408 QEYELVVTTY---AGLYR-------------YRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKN 469 (612)
T ss_pred CeEEEEEEec---CceEE-------------EecCCEEEEeeecCCCceEEEEeecCceeecccccCCHHHHHHHHHH
Confidence 6789999874 34443 99999998862 35799999999988999999999999877765
No 139
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=95.87 E-value=0.084 Score=52.56 Aligned_cols=94 Identities=16% Similarity=0.109 Sum_probs=78.5
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCch--hHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEE
Q 008342 44 KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVP--AMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVV 121 (569)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 121 (569)
-.+|+.|....+..+|+.|...|..+||+|.....-+. .-+-..+|+.++|++++|+.+. ..+.-..+++++++.++
T Consensus 108 ~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g-~~~~~~~l~~df~~tvI 186 (438)
T COG1541 108 FGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGG-NTERQLELMKDFKPTVI 186 (438)
T ss_pred eecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCc-cHHHHHHHHHhcCCcEE
Confidence 34999999999999999999999999999888776322 2267889999999999999884 56777889999999999
Q ss_pred EEcccchHHHHHHHHHH
Q 008342 122 IVDQEFFSLAEEALKMM 138 (569)
Q Consensus 122 i~~~~~~~~~~~~~~~~ 138 (569)
.+.+.+.-.+.+.+...
T Consensus 187 ~~tps~~l~lae~~~~~ 203 (438)
T COG1541 187 AATPSYLLYLAEEAEEE 203 (438)
T ss_pred EEChHHHHHHHHHHHHc
Confidence 99998876666655544
No 140
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=87.57 E-value=4.7 Score=41.54 Aligned_cols=80 Identities=13% Similarity=0.118 Sum_probs=61.9
Q ss_pred eeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchh--HHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEE
Q 008342 45 HYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPA--MYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVI 122 (569)
Q Consensus 45 ~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 122 (569)
-+|..++...+...+..+...|+++||++.+..+.... .....+++...|+.+++... ......++++.++.+++
T Consensus 105 ~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l~ 181 (445)
T TIGR03335 105 FLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGIV 181 (445)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEEE
Confidence 48999999888888888888899999999998776542 23456788899998776543 23457788999999988
Q ss_pred Ecccc
Q 008342 123 VDQEF 127 (569)
Q Consensus 123 ~~~~~ 127 (569)
.....
T Consensus 182 ~~ps~ 186 (445)
T TIGR03335 182 ASVFK 186 (445)
T ss_pred ECHHH
Confidence 76554
No 141
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=87.43 E-value=4.3 Score=41.47 Aligned_cols=88 Identities=13% Similarity=0.088 Sum_probs=66.7
Q ss_pred eeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCch--hHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEE
Q 008342 45 HYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVP--AMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVI 122 (569)
Q Consensus 45 ~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 122 (569)
.+|..++......++..+...|+++||++....+... ......+++...|+.+++++.. ..+.+...|+..++.+++
T Consensus 94 ~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~t~l~ 172 (422)
T TIGR02155 94 GYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGG-QTEKQVQLIQDFKPDIIM 172 (422)
T ss_pred ccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCC-CHHHHHHHHHHHCCCEEE
Confidence 3688888777777777787889999999887665432 2233457788999999988765 457788999999999999
Q ss_pred EcccchHHHHH
Q 008342 123 VDQEFFSLAEE 133 (569)
Q Consensus 123 ~~~~~~~~~~~ 133 (569)
..+.....+.+
T Consensus 173 ~~Ps~l~~L~~ 183 (422)
T TIGR02155 173 VTPSYMLNLLE 183 (422)
T ss_pred EcHHHHHHHHH
Confidence 98876655443
No 142
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=79.88 E-value=9.9 Score=34.96 Aligned_cols=76 Identities=13% Similarity=0.117 Sum_probs=54.4
Q ss_pred CCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCch--hHHHHHHHhhhcCceEeeccccCCHHHHHH
Q 008342 34 PTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVP--AMYEAQFGAPMAGAVLNSINIRLNATVVAF 111 (569)
Q Consensus 34 p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 111 (569)
++.+|++..-.-.|.+.+.... ...|+.++|++. .+|-.. .+...+++++..|++.+.+ ++++++.+-.
T Consensus 149 ~~D~a~l~yTsg~~~~~~~~~~-------~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~ 219 (227)
T TIGR03089 149 ATAPALVAGGGEWTGAELVAAA-------RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQ 219 (227)
T ss_pred CCcceeeeccccccHHHHHHHH-------hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHH
Confidence 3555665544334545444332 556889999999 888653 3445789999999998887 6899999999
Q ss_pred HHhcCCc
Q 008342 112 ILSHASS 118 (569)
Q Consensus 112 ~l~~~~~ 118 (569)
.+++.++
T Consensus 220 ~i~~~~v 226 (227)
T TIGR03089 220 IAETERV 226 (227)
T ss_pred HHHhhcC
Confidence 9988775
No 143
>PLN02736 long-chain acyl-CoA synthetase
Probab=76.55 E-value=49 Score=36.06 Aligned_cols=99 Identities=15% Similarity=0.039 Sum_probs=67.8
Q ss_pred eeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEe
Q 008342 213 VVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFC 288 (569)
Q Consensus 213 v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~ 288 (569)
..+|++.+......... ..|+.++|++...++-+.-+ ....+++...|+..+.+ +...++++...+++.++++++
T Consensus 77 ~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~ 155 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEW-LIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIF 155 (651)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEE
Confidence 44788887666655444 45899999998888764332 23344555566666655 557889999999999999999
Q ss_pred ehHHHHHHHHccCCCCCCCCcccceeeee
Q 008342 289 AAPVVLNAIANASPEDTILPLTNVVNVNT 317 (569)
Q Consensus 289 ~~P~~~~~l~~~~~~~~~~~l~~l~~~~~ 317 (569)
..+..+..+...... ++.++.++.
T Consensus 156 ~~~~~~~~~~~~~~~-----~~~l~~ii~ 179 (651)
T PLN02736 156 CVPQTLNTLLSCLSE-----IPSVRLIVV 179 (651)
T ss_pred ECHHHHHHHHHHhhc-----CCCceEEEE
Confidence 998887766553221 344555544
No 144
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=73.17 E-value=23 Score=29.55 Aligned_cols=100 Identities=11% Similarity=0.080 Sum_probs=56.3
Q ss_pred EEEEcCCc-cchhhHHHHHHHHHhcceEEEe-c-cCChHHHHHHHHhcCccEEeehHH------HHHHHHccCCCCCCCC
Q 008342 238 VFLWTLPM-FHGNGWSYTWSLAALCGTSICL-R-QVTAKAVYTAIATHGVTHFCAAPV------VLNAIANASPEDTILP 308 (569)
Q Consensus 238 ~~~~~~p~-~~~~g~~~~~~~~~~g~~~~~~-~-~~~~~~~~~~i~~~~~t~l~~~P~------~~~~l~~~~~~~~~~~ 308 (569)
+++...+- .|..|.......+-..|--++. . ...++++.+.+.+++++++..+-. .+..+.+......
T Consensus 6 vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~--- 82 (137)
T PRK02261 6 VVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAG--- 82 (137)
T ss_pred EEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcC---
Confidence 34444443 6888876555555555544444 3 467899999999999998866532 2223332222221
Q ss_pred cccceeeeecCCCC-C----HHHHHHhhhcCCeEeccccc
Q 008342 309 LTNVVNVNTAGAPP-P----PSLLFAMSQKGFRITHTYGL 343 (569)
Q Consensus 309 l~~l~~~~~~g~~l-~----~~~~~~~~~~~~~i~~~YG~ 343 (569)
++.+ .+++||... + ++..+++++.|+ -..|+.
T Consensus 83 ~~~~-~i~vGG~~~~~~~~~~~~~~~l~~~G~--~~vf~~ 119 (137)
T PRK02261 83 LGDI-LLYVGGNLVVGKHDFEEVEKKFKEMGF--DRVFPP 119 (137)
T ss_pred CCCC-eEEEECCCCCCccChHHHHHHHHHcCC--CEEECc
Confidence 3344 466777653 2 344556667663 334553
No 145
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=72.78 E-value=26 Score=36.65 Aligned_cols=84 Identities=13% Similarity=0.104 Sum_probs=63.1
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCch--hHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEE
Q 008342 44 KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVP--AMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVV 121 (569)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 121 (569)
-.+|+..+...+..+... .++++++++...++... .+...+++++..|+.+++. +..+.+.+...+++.++.++
T Consensus 184 v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~ 259 (513)
T PRK07656 184 AMLTHRQLLSNAADWAEY---LGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL-PVFDPDEVFRLIETERITVL 259 (513)
T ss_pred EEEecHHHHHHHHHHHHh---hCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-CcCCHHHHHHHHHHhCCeEE
Confidence 358899887766555443 47889999988877543 3345678999999987765 56788999999999999999
Q ss_pred EEcccchHHH
Q 008342 122 IVDQEFFSLA 131 (569)
Q Consensus 122 i~~~~~~~~~ 131 (569)
+..+.....+
T Consensus 260 ~~~p~~~~~l 269 (513)
T PRK07656 260 PGPPTMYNSL 269 (513)
T ss_pred echHHHHHHH
Confidence 8877655443
No 146
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=72.23 E-value=50 Score=31.47 Aligned_cols=99 Identities=20% Similarity=0.164 Sum_probs=62.9
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccC----CHHHHHHHHhcCCce
Q 008342 44 KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRL----NATVVAFILSHASSA 119 (569)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~----~~~~l~~~l~~~~~~ 119 (569)
..+-++-+. |+..||..|.+. |..|.+++.+....+.. .+...|..+..++... ..+++..++++.+++
T Consensus 10 ~~iG~GHv~-Rcl~LA~~l~~~----g~~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d 82 (279)
T TIGR03590 10 SEIGLGHVM-RCLTLARALHAQ----GAEVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEEKFD 82 (279)
T ss_pred ccccccHHH-HHHHHHHHHHHC----CCEEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCC
Confidence 444444443 577899999765 45777777776555433 3357777766664432 355788999999999
Q ss_pred EEEEcccc-hHHHHHHHHHHhhhcCCCCCcCeEEEecCCC
Q 008342 120 VVIVDQEF-FSLAEEALKMMEANSEGKLKTPHLIVIGDES 158 (569)
Q Consensus 120 ~vi~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 158 (569)
++|+|.-. ........+. ....++.++|..
T Consensus 83 ~vV~D~y~~~~~~~~~~k~---------~~~~l~~iDD~~ 113 (279)
T TIGR03590 83 ILIVDHYGLDADWEKLIKE---------FGRKILVIDDLA 113 (279)
T ss_pred EEEEcCCCCCHHHHHHHHH---------hCCeEEEEecCC
Confidence 99999843 3333333332 245778888753
No 147
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=68.50 E-value=53 Score=33.16 Aligned_cols=88 Identities=10% Similarity=0.005 Sum_probs=60.7
Q ss_pred CcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-c
Q 008342 193 DEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-R 268 (569)
Q Consensus 193 ~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~ 268 (569)
.++.++++. -....+|++.+...+..... ..++++++++....+-+. ..+...+++...|+..+.+ +
T Consensus 8 ~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~-~~~~~~~A~~~~G~~~v~l~~ 78 (417)
T PF00501_consen 8 YPDRIALID--------DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSI-EFVVAFLACLRAGAIPVPLDP 78 (417)
T ss_dssp STTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSH-HHHHHHHHHHHTT-EEEEEET
T ss_pred CCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccc-eeeeeeccccccccccccccc
Confidence 345566655 23456678877666554443 458899999988877642 3344555566667777776 4
Q ss_pred cCChHHHHHHHHhcCccEEee
Q 008342 269 QVTAKAVYTAIATHGVTHFCA 289 (569)
Q Consensus 269 ~~~~~~~~~~i~~~~~t~l~~ 289 (569)
....+++...+++.++++++.
T Consensus 79 ~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 79 SLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp TSSHHHHHHHHHHHTESEEEE
T ss_pred ccccccccccccccceeEEEE
Confidence 577899999999999999996
No 148
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=68.27 E-value=62 Score=33.02 Aligned_cols=93 Identities=10% Similarity=0.054 Sum_probs=71.3
Q ss_pred hCCCceeeeeC---------CeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcC--CchhHHHHHHHhhhcCceEeec
Q 008342 32 LHPTRKSVVYG---------SKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAP--NVPAMYEAQFGAPMAGAVLNSI 100 (569)
Q Consensus 32 ~~p~~~a~~~~---------~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~--~~~~~~~~~lA~~~~G~~~v~l 100 (569)
..||..+.+.. +.++|.-.+.+++..++..+ |+...+++.+-.| .+..+++..+|++.-|++.+.-
T Consensus 231 ~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~---g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp 307 (596)
T KOG1177|consen 231 LSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARA---GYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFP 307 (596)
T ss_pred cCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHh---CcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEee
Confidence 46677666553 26799999999998888755 6665445544333 2345577788999999999998
Q ss_pred cccCCHHHHHHHHhcCCceEEEEcccc
Q 008342 101 NIRLNATVVAFILSHASSAVVIVDQEF 127 (569)
Q Consensus 101 ~~~~~~~~l~~~l~~~~~~~vi~~~~~ 127 (569)
.|.+.+..+.+.+.+.+|..++..+..
T Consensus 308 ~~~f~~k~alqai~~ekcT~l~gtPtM 334 (596)
T KOG1177|consen 308 APSFDPKDALQAISNEKCTTLYGTPTM 334 (596)
T ss_pred CCCCChHHHHHHHHhhceEEEecChHH
Confidence 999999999999999999999987754
No 149
>PRK08315 AMP-binding domain protein; Validated
Probab=66.94 E-value=48 Score=35.16 Aligned_cols=82 Identities=9% Similarity=0.048 Sum_probs=61.7
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCc--hhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEE
Q 008342 44 KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNV--PAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVV 121 (569)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 121 (569)
-.+|+..+...+..+... .+++++|++...+|-. ..++..+++++..|+..+......++..+...+++.++.++
T Consensus 217 v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~ 293 (559)
T PRK08315 217 ATLTHRNILNNGYFIGEA---MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTAL 293 (559)
T ss_pred EEeeHHHHHHHHHHHHHh---cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEE
Confidence 458888887665555443 4789999998877753 34456678888999888766667788889999999999999
Q ss_pred EEcccch
Q 008342 122 IVDQEFF 128 (569)
Q Consensus 122 i~~~~~~ 128 (569)
+..+...
T Consensus 294 ~~~P~~~ 300 (559)
T PRK08315 294 YGVPTMF 300 (559)
T ss_pred ecchHHH
Confidence 8777644
No 150
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=66.03 E-value=61 Score=35.70 Aligned_cols=102 Identities=13% Similarity=-0.026 Sum_probs=69.0
Q ss_pred ceeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEE
Q 008342 212 GVVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHF 287 (569)
Q Consensus 212 ~v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l 287 (569)
-..+|++.+...+..... ..++.++|++...++-+.-. +...++++..|+..+.+ ....++++...+++.+++++
T Consensus 104 ~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~l 182 (696)
T PLN02387 104 YEWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAEW-LIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTV 182 (696)
T ss_pred cEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEE
Confidence 345788887666655444 56899999998888754322 23344455566666655 56788999999999999999
Q ss_pred eehHHHHHHHHccCCCCCCCCcccceeeeecC
Q 008342 288 CAAPVVLNAIANASPEDTILPLTNVVNVNTAG 319 (569)
Q Consensus 288 ~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g 319 (569)
+.....+..+...... +++++.++.-+
T Consensus 183 i~~~~~~~~l~~~~~~-----~~~l~~ii~~~ 209 (696)
T PLN02387 183 ICDSKQLKKLIDISSQ-----LETVKRVIYMD 209 (696)
T ss_pred EECHHHHHHHHHHhhc-----cCCceEEEEEC
Confidence 9988887777654321 44555555433
No 151
>PRK12583 acyl-CoA synthetase; Provisional
Probab=65.63 E-value=58 Score=34.55 Aligned_cols=82 Identities=16% Similarity=0.122 Sum_probs=61.3
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCc--hhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEE
Q 008342 44 KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNV--PAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVV 121 (569)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 121 (569)
-.+|+..+...+..+...+ +++++|++...+|-. ...+..+++++..|+.++......+...+...+++.++.++
T Consensus 219 v~~s~~~l~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l 295 (558)
T PRK12583 219 ATLSHHNILNNGYFVAESL---GLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTAL 295 (558)
T ss_pred EEeeHHHHHHHHHHHHHHh---CCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEE
Confidence 4588888876666555443 788899998877642 45566678888899887755556778888999999999998
Q ss_pred EEcccch
Q 008342 122 IVDQEFF 128 (569)
Q Consensus 122 i~~~~~~ 128 (569)
+..+...
T Consensus 296 ~~~P~~~ 302 (558)
T PRK12583 296 YGVPTMF 302 (558)
T ss_pred eccHHHH
Confidence 8776543
No 152
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=65.40 E-value=59 Score=34.46 Aligned_cols=97 Identities=11% Similarity=0.050 Sum_probs=67.6
Q ss_pred CCCceeeeeCC---------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCc--hhHHHHHHHhhhcCceEeecc
Q 008342 33 HPTRKSVVYGS---------KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNV--PAMYEAQFGAPMAGAVLNSIN 101 (569)
Q Consensus 33 ~p~~~a~~~~~---------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~ 101 (569)
.++.+|++..- -.+|++.+...+..... ..++.++|++...+|-. ..+...++..+..|+..+...
T Consensus 181 ~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~ 257 (539)
T PRK06334 181 DPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLK---FFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAY 257 (539)
T ss_pred CcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH---hcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEec
Confidence 45677766531 45898888766544433 34678899988877743 233334567778888877665
Q ss_pred ccCCHHHHHHHHhcCCceEEEEcccchHHHH
Q 008342 102 IRLNATVVAFILSHASSAVVIVDQEFFSLAE 132 (569)
Q Consensus 102 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 132 (569)
....+..+...|++.++.++...+.....+.
T Consensus 258 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 288 (539)
T PRK06334 258 NPLYPKKIVEMIDEAKVTFLGSTPVFFDYIL 288 (539)
T ss_pred CCCCHHHHHHHHHHhCCcEEEecHHHHHHHH
Confidence 5577899999999999999998877655443
No 153
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=65.20 E-value=37 Score=35.54 Aligned_cols=84 Identities=11% Similarity=0.068 Sum_probs=62.9
Q ss_pred eeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhH-HHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEE
Q 008342 45 HYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAM-YEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIV 123 (569)
Q Consensus 45 ~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 123 (569)
.+|++.+...+..... ..+++++|++...++....+ +...++++..|+..+..+.. +...+...+++.++..+++
T Consensus 186 ~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~-~~~~~~~~l~~~~~t~l~~ 261 (521)
T PRK06187 186 VLSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRRF-DPENLLDLIETERVTFFFA 261 (521)
T ss_pred EeehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCCC-CHHHHHHHHHHhCCeEEEc
Confidence 5788888876666555 44788999998887764322 34445688889988877654 8899999999999999998
Q ss_pred cccchHHHH
Q 008342 124 DQEFFSLAE 132 (569)
Q Consensus 124 ~~~~~~~~~ 132 (569)
.+.....+.
T Consensus 262 ~p~~~~~l~ 270 (521)
T PRK06187 262 VPTIWQMLL 270 (521)
T ss_pred hHHHHHHHH
Confidence 877555443
No 154
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=64.88 E-value=1.3e+02 Score=29.93 Aligned_cols=62 Identities=16% Similarity=0.083 Sum_probs=45.5
Q ss_pred hcC-CCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcc
Q 008342 64 KLS-IGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQ 125 (569)
Q Consensus 64 ~~g-~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 125 (569)
+.| +++|....+....+-.-+.+.++|...|..+..+-|......-..+++.+++++++++.
T Consensus 103 ~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 103 KKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 344 57785444445555666777778888899877777766666668999999999999975
No 155
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=62.85 E-value=79 Score=35.12 Aligned_cols=101 Identities=8% Similarity=0.026 Sum_probs=68.3
Q ss_pred eeecchHHHHHHHHhHhH------hCCCCC-----------cEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHH
Q 008342 213 VVVSHRGAYLMSLNGALI------WGMNEG-----------AVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKA 274 (569)
Q Consensus 213 v~~t~~~~~~~~~~~~~~------~~~~~~-----------d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~ 274 (569)
..+|.+.+...+...... .|+.++ |++...++-+. --+...++++..|+..+.+ +.+.+++
T Consensus 90 ~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~-ew~~~~lA~~~~Gav~Vpl~~~~~~~e 168 (746)
T PTZ00342 90 NYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSI-NWLVADLACMLSGVTTLVMHSKFSIDV 168 (746)
T ss_pred eeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCH-HHHHHHHHHHHcCCeEEEecCCCCHHH
Confidence 457888776665554432 378887 88887776432 2233445555667766666 5688999
Q ss_pred HHHHHHhcCccEEeehHHHHHHHHccCCCCCCCCcccceeeeecC
Q 008342 275 VYTAIATHGVTHFCAAPVVLNAIANASPEDTILPLTNVVNVNTAG 319 (569)
Q Consensus 275 ~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g 319 (569)
+...+++.++.+++..+..+..+...... ++.++.++.-+
T Consensus 169 l~~il~~s~~~~lv~~~~~~~~l~~~~~~-----~~~l~~ii~~~ 208 (746)
T PTZ00342 169 IVDILNETKLEWLCLDLDLVEGLLERKNE-----LPHLKKLIILD 208 (746)
T ss_pred HHHHHhcCCCCEEEEcHHHHHHHHHhhcc-----CCCceEEEEEC
Confidence 99999999999999988888777654322 45666665543
No 156
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=61.03 E-value=84 Score=34.23 Aligned_cols=78 Identities=12% Similarity=-0.015 Sum_probs=57.8
Q ss_pred eeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEe
Q 008342 213 VVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFC 288 (569)
Q Consensus 213 v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~ 288 (569)
..+|.+.+......... ..|++++|++...+|..--. +...+++...|+..+.+ +.+.++++...+++.++++++
T Consensus 91 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~-~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li 169 (647)
T PTZ00237 91 IKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEP-LIAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLII 169 (647)
T ss_pred EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEE
Confidence 56889888766655544 45899999999999875333 33445555666666555 568899999999999999998
Q ss_pred ehH
Q 008342 289 AAP 291 (569)
Q Consensus 289 ~~P 291 (569)
...
T Consensus 170 ~~~ 172 (647)
T PTZ00237 170 TTN 172 (647)
T ss_pred Ecc
Confidence 754
No 157
>PLN03052 acetate--CoA ligase; Provisional
Probab=59.32 E-value=1e+02 Score=34.25 Aligned_cols=97 Identities=9% Similarity=0.029 Sum_probs=64.2
Q ss_pred cCceEEEEeccCCCCCCcceeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-cc
Q 008342 194 EWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQ 269 (569)
Q Consensus 194 ~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~ 269 (569)
++.++++.-..+..+.+ ...+|...+......... ..|++++|++...+|..-- .....+++...|+..+.+ +.
T Consensus 189 pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e-~via~LA~~~~Gav~vpi~p~ 266 (728)
T PLN03052 189 DDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVH-AVIIYLAIILAGCVVVSIADS 266 (728)
T ss_pred CCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHH-HHHHHHHHHHcCCEEEeeCCC
Confidence 34566554332221222 345788887666555444 4689999999999986432 234455555666666655 56
Q ss_pred CChHHHHHHHHhcCccEEeehHH
Q 008342 270 VTAKAVYTAIATHGVTHFCAAPV 292 (569)
Q Consensus 270 ~~~~~~~~~i~~~~~t~l~~~P~ 292 (569)
+.++++...+++.++.+++....
T Consensus 267 ~~~~~l~~rl~~~~~k~lit~d~ 289 (728)
T PLN03052 267 FAPSEIATRLKISKAKAIFTQDV 289 (728)
T ss_pred CCHHHHHHHHHhcCceEEEEcCc
Confidence 88999999999999999988654
No 158
>PRK09274 peptide synthase; Provisional
Probab=59.19 E-value=97 Score=32.81 Aligned_cols=80 Identities=14% Similarity=0.035 Sum_probs=55.0
Q ss_pred cceeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccE
Q 008342 211 KGVVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTH 286 (569)
Q Consensus 211 k~v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~ 286 (569)
+...+|.+.+...+..... ..+++++|++...++-+..+ ....++++..|+..+.+ +....+++...+++.++..
T Consensus 38 ~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~-~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 116 (552)
T PRK09274 38 AYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEF-FALTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDA 116 (552)
T ss_pred ccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHH-HHHHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCE
Confidence 3346788888766655444 45889999999888754322 33344555566665555 4467788999999999999
Q ss_pred EeehH
Q 008342 287 FCAAP 291 (569)
Q Consensus 287 l~~~P 291 (569)
++..+
T Consensus 117 ~i~~~ 121 (552)
T PRK09274 117 FIGIP 121 (552)
T ss_pred EEecc
Confidence 88754
No 159
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=58.33 E-value=60 Score=33.00 Aligned_cols=80 Identities=10% Similarity=0.054 Sum_probs=60.0
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCch-hHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEE
Q 008342 44 KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVP-AMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVI 122 (569)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 122 (569)
-.+|++.+...+...+..+ +++++|++...++-.. ..+..+++++..|+..+..++. +.+...+++.++.++.
T Consensus 129 v~~s~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~l~~~~~t~~~ 202 (436)
T TIGR01923 129 VPHTFRNHYASAVGSKENL---GFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF---NQLLEMIANERVTHIS 202 (436)
T ss_pred EEEehHHHHHHHHHHHhhc---CCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH---HHHHHHHHHhCCeEEE
Confidence 4689999888777766544 7899999988777543 2234567888999988877543 4888899999999998
Q ss_pred EcccchH
Q 008342 123 VDQEFFS 129 (569)
Q Consensus 123 ~~~~~~~ 129 (569)
..+....
T Consensus 203 ~~P~~l~ 209 (436)
T TIGR01923 203 LVPTQLN 209 (436)
T ss_pred eHHHHHH
Confidence 8776543
No 160
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=58.27 E-value=79 Score=33.71 Aligned_cols=85 Identities=11% Similarity=-0.103 Sum_probs=61.3
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchh--HHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEE
Q 008342 44 KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPA--MYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVV 121 (569)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 121 (569)
-.+|++.+...+... ....+++++|++...++.... ....+++.+..|+..+......++..+...+++.++.++
T Consensus 223 V~~s~~~l~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~ 299 (570)
T PRK04319 223 VLHVHNAMLQHYQTG---KYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVW 299 (570)
T ss_pred EEEecHHHHHHHHHH---HHhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEE
Confidence 357887776544333 334578889987766654432 245577888899988877777889999999999999999
Q ss_pred EEcccchHHH
Q 008342 122 IVDQEFFSLA 131 (569)
Q Consensus 122 i~~~~~~~~~ 131 (569)
+..+.....+
T Consensus 300 ~~~P~~~~~l 309 (570)
T PRK04319 300 YTAPTAIRML 309 (570)
T ss_pred EeCHHHHHHH
Confidence 9887765544
No 161
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=58.08 E-value=99 Score=31.01 Aligned_cols=98 Identities=18% Similarity=0.150 Sum_probs=71.2
Q ss_pred CCceeeeeCC---------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchh-HHHHHHHhhhcCceEeecccc
Q 008342 34 PTRKSVVYGS---------KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPA-MYEAQFGAPMAGAVLNSINIR 103 (569)
Q Consensus 34 p~~~a~~~~~---------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~ 103 (569)
++.++++... -.+|++.+...+..+.. ..+++++|++....|.+.. .+..+++.+..|+..+..+..
T Consensus 119 ~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~ 195 (408)
T TIGR01733 119 PDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLAR---RYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPED 195 (408)
T ss_pred CCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChh
Confidence 5666665431 45788888877776665 3367789999888776543 355667888888887777665
Q ss_pred CC--HHHHHHHHhcCCceEEEEcccchHHHHHH
Q 008342 104 LN--ATVVAFILSHASSAVVIVDQEFFSLAEEA 134 (569)
Q Consensus 104 ~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 134 (569)
.. ...+..+++..++..++..+.....+...
T Consensus 196 ~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~ 228 (408)
T TIGR01733 196 EERDAALLAALIAEHPVTVLNLTPSLLALLAAA 228 (408)
T ss_pred hccCHHHHHHHHHHcCceEEEeCHHHHHHHHHh
Confidence 54 68899999999999999998876665543
No 162
>PLN02614 long-chain acyl-CoA synthetase
Probab=56.57 E-value=1.3e+02 Score=33.01 Aligned_cols=86 Identities=13% Similarity=-0.078 Sum_probs=60.3
Q ss_pred eeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEe
Q 008342 213 VVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFC 288 (569)
Q Consensus 213 v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~ 288 (569)
..+|++.+...+..... ..|+.++|++...++-+.-. +...++++..|+..+.+ +...++++...+++.++.+++
T Consensus 78 ~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~-~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi 156 (666)
T PLN02614 78 VWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEW-IISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVF 156 (666)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEE
Confidence 34688887666655444 45899999998888764322 23344455556655555 557889999999999999999
Q ss_pred ehHHHHHHHHc
Q 008342 289 AAPVVLNAIAN 299 (569)
Q Consensus 289 ~~P~~~~~l~~ 299 (569)
.....+..+..
T Consensus 157 ~~~~~~~~~~~ 167 (666)
T PLN02614 157 VEEKKISELFK 167 (666)
T ss_pred ECHHHHHHHHH
Confidence 98876666543
No 163
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=56.27 E-value=70 Score=33.42 Aligned_cols=84 Identities=11% Similarity=-0.040 Sum_probs=64.1
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchh-HHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEE
Q 008342 44 KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPA-MYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVI 122 (569)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 122 (569)
-.+|+..+...+..+...+ ++++||++...+|-+.. .+..+++++..|+..+.. +...++.+...+++.++.++.
T Consensus 179 v~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 254 (515)
T TIGR03098 179 VVLSHRNLVAGAQSVATYL---ENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLH-DYLLPRDVLKALEKHGITGLA 254 (515)
T ss_pred EEEecHHHHHHHHHHHHHh---CCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEc-CCCCHHHHHHHHHHcCCceEe
Confidence 4588888887777665543 57889999888886543 345667889999988765 456889999999999999999
Q ss_pred EcccchHHH
Q 008342 123 VDQEFFSLA 131 (569)
Q Consensus 123 ~~~~~~~~~ 131 (569)
..+.....+
T Consensus 255 ~~P~~~~~l 263 (515)
T TIGR03098 255 AVPPLWAQL 263 (515)
T ss_pred cChHHHHHH
Confidence 888765443
No 164
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=54.85 E-value=1.8e+02 Score=26.92 Aligned_cols=94 Identities=7% Similarity=-0.085 Sum_probs=55.8
Q ss_pred CCceeeeeCCeee--eHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHH
Q 008342 34 PTRKSVVYGSKHY--TWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAF 111 (569)
Q Consensus 34 p~~~a~~~~~~~~--Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 111 (569)
..++.+-.++..- ++++ +.+..+...+.+.|..++..|.... .+-....+.++|...|..+..+-|......-..
T Consensus 14 ~~~l~~K~e~~~ptgS~K~--R~a~~~l~~a~~~g~~~~~~vv~~s-sGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~ 90 (244)
T cd00640 14 GANIYLKLEFLNPTGSFKD--RGALNLILLAEEEGKLPKGVIIEST-GGNTGIALAAAAARLGLKCTIVMPEGASPEKVA 90 (244)
T ss_pred CCEEEEEecccCCcCCcHH--HHHHHHHHHHHHcCCCCCCEEEEeC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHH
Confidence 3456665555333 3332 2222333333344432455554443 345556666777778987777767666777788
Q ss_pred HHhcCCceEEEEcccchHH
Q 008342 112 ILSHASSAVVIVDQEFFSL 130 (569)
Q Consensus 112 ~l~~~~~~~vi~~~~~~~~ 130 (569)
.++..+++++.++......
T Consensus 91 ~~~~~Ga~v~~~~~~~~~~ 109 (244)
T cd00640 91 QMRALGAEVVLVPGDFDDA 109 (244)
T ss_pred HHHHCCCEEEEECCCHHHH
Confidence 8999999999998874433
No 165
>PLN02654 acetate-CoA ligase
Probab=54.72 E-value=1.2e+02 Score=33.14 Aligned_cols=79 Identities=11% Similarity=0.002 Sum_probs=57.1
Q ss_pred eeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEe
Q 008342 213 VVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFC 288 (569)
Q Consensus 213 v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~ 288 (569)
..+|.+.+......... ..|++++|++...+|..--+ ....+++...|+..+.+ +.+.++++...+++.++.+++
T Consensus 119 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~-v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li 197 (666)
T PLN02654 119 ASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMEL-PIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVI 197 (666)
T ss_pred EEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEE
Confidence 46888888766655444 56899999999998864322 33444555566665555 568889999999999999998
Q ss_pred ehHH
Q 008342 289 AAPV 292 (569)
Q Consensus 289 ~~P~ 292 (569)
+...
T Consensus 198 ~~~~ 201 (666)
T PLN02654 198 TCNA 201 (666)
T ss_pred EcCc
Confidence 7654
No 166
>PLN03051 acyl-activating enzyme; Provisional
Probab=54.40 E-value=73 Score=33.32 Aligned_cols=85 Identities=13% Similarity=-0.068 Sum_probs=58.7
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchh-HHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEE
Q 008342 44 KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPA-MYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVI 122 (569)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 122 (569)
-.+|++.+...+.... ...++.++|++...+|-... .+..+++++..|+..+..+.......+...+++.++.++.
T Consensus 137 V~~sh~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~ 213 (499)
T PLN03051 137 IPWTHLSPLRCASDGW---AHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLG 213 (499)
T ss_pred EEEccchHHHHHHHHH---HhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEE
Confidence 3577776655433322 33578889988776664321 2345678889999988776555678899999999999999
Q ss_pred EcccchHHH
Q 008342 123 VDQEFFSLA 131 (569)
Q Consensus 123 ~~~~~~~~~ 131 (569)
..+.....+
T Consensus 214 ~vP~~~~~l 222 (499)
T PLN03051 214 LVPSIVKAW 222 (499)
T ss_pred eCHHHHHHH
Confidence 877665443
No 167
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=54.33 E-value=44 Score=33.26 Aligned_cols=65 Identities=18% Similarity=0.234 Sum_probs=47.6
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeecccc-----CCHHHHHHHHhcCCceEEEE
Q 008342 55 CRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIR-----LNATVVAFILSHASSAVVIV 123 (569)
Q Consensus 55 ~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~ 123 (569)
...+.-.|+.+++++||-|.+ ++..|+...=+++..|+.+|.+|-+ .+++.+...|... .|+|+.
T Consensus 59 T~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIip 128 (374)
T COG0399 59 TAALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIP 128 (374)
T ss_pred HHHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEE
Confidence 344555566678999996644 3467888888999999999998754 5678888888764 566664
No 168
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=54.00 E-value=1.2e+02 Score=27.04 Aligned_cols=90 Identities=14% Similarity=0.157 Sum_probs=53.5
Q ss_pred EEEEcCCc--cchhhHHHHHHHHHhcceEEE-e-ccCChHHHHHHHHhcCccEEeehHH------HHHHHHccCCCCCCC
Q 008342 238 VFLWTLPM--FHGNGWSYTWSLAALCGTSIC-L-RQVTAKAVYTAIATHGVTHFCAAPV------VLNAIANASPEDTIL 307 (569)
Q Consensus 238 ~~~~~~p~--~~~~g~~~~~~~~~~g~~~~~-~-~~~~~~~~~~~i~~~~~t~l~~~P~------~~~~l~~~~~~~~~~ 307 (569)
+++...+. .|..|....-..+-..|--++ + ....++++.+.+++++++++..+-+ .+..+.+.......
T Consensus 86 ~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~- 164 (197)
T TIGR02370 86 KVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGY- 164 (197)
T ss_pred eEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCC-
Confidence 44444443 788888666666655554444 4 4467799999999999998876532 12233222222110
Q ss_pred CcccceeeeecCCCCCHHHHHHh
Q 008342 308 PLTNVVNVNTAGAPPPPSLLFAM 330 (569)
Q Consensus 308 ~l~~l~~~~~~g~~l~~~~~~~~ 330 (569)
.+.+ .+++||.+++++..+.+
T Consensus 165 -~~~v-~i~vGG~~~~~~~~~~~ 185 (197)
T TIGR02370 165 -RDSV-KFMVGGAPVTQDWADKI 185 (197)
T ss_pred -CCCC-EEEEEChhcCHHHHHHh
Confidence 1122 48899999987654433
No 169
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=53.56 E-value=1.3e+02 Score=32.83 Aligned_cols=78 Identities=12% Similarity=-0.026 Sum_probs=56.5
Q ss_pred eeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEe
Q 008342 213 VVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFC 288 (569)
Q Consensus 213 v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~ 288 (569)
..+|++.+......... ..|++++|++...+|..--+ ....+++...|+..+.+ +.+.++++...+++.++.+++
T Consensus 113 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~-~~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li 191 (652)
T TIGR01217 113 APVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQA-VVAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLF 191 (652)
T ss_pred eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEE
Confidence 45788887766655444 45899999999999875332 33445555666665555 557889999999999999998
Q ss_pred ehH
Q 008342 289 AAP 291 (569)
Q Consensus 289 ~~P 291 (569)
+..
T Consensus 192 ~~~ 194 (652)
T TIGR01217 192 TVD 194 (652)
T ss_pred Ecc
Confidence 754
No 170
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=53.42 E-value=1.4e+02 Score=32.66 Aligned_cols=79 Identities=13% Similarity=-0.043 Sum_probs=56.7
Q ss_pred eeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEe
Q 008342 213 VVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFC 288 (569)
Q Consensus 213 v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~ 288 (569)
..+|++.+......... ..+++++|++...+|... -.....+++...|+..+.+ +.+.++++...++..++..++
T Consensus 113 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~-e~v~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li 191 (655)
T PRK03584 113 RELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIP-ETVVAMLATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLI 191 (655)
T ss_pred EEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEE
Confidence 46788887666655444 458999999999988643 2234455556667666666 557889999999999999998
Q ss_pred ehHH
Q 008342 289 AAPV 292 (569)
Q Consensus 289 ~~P~ 292 (569)
+...
T Consensus 192 ~~~~ 195 (655)
T PRK03584 192 AVDG 195 (655)
T ss_pred Eccc
Confidence 7653
No 171
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=53.36 E-value=59 Score=32.37 Aligned_cols=65 Identities=20% Similarity=0.222 Sum_probs=43.6
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeecccc-----CCHHHHHHHHhcCCceEEEEcc
Q 008342 57 RFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIR-----LNATVVAFILSHASSAVVIVDQ 125 (569)
Q Consensus 57 ~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~~~ 125 (569)
.+-..|..+|+++||.|++-. ..+....-|+...|+.++.++-+ .+.+.+...+..-. ++|+...
T Consensus 52 Al~~al~~l~~~~gdeVi~p~---~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~~h 121 (363)
T PF01041_consen 52 ALHLALRALGLGPGDEVIVPA---YTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILVVH 121 (363)
T ss_dssp HHHHHHHHTTGGTTSEEEEES---SS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEEE-
T ss_pred HHHHHHHhcCCCcCceEecCC---CcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEEec
Confidence 444556668999999998754 44556778889999999888765 55788888876544 6666543
No 172
>PRK11761 cysM cysteine synthase B; Provisional
Probab=52.98 E-value=1.7e+02 Score=28.20 Aligned_cols=88 Identities=11% Similarity=0.001 Sum_probs=57.1
Q ss_pred CceeeeeCC--eeeeHHHHHHHHHHHHHHHHhcC-CCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHH
Q 008342 35 TRKSVVYGS--KHYTWHQTYRRCRRFASALSKLS-IGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAF 111 (569)
Q Consensus 35 ~~~a~~~~~--~~~Ty~el~~~~~~la~~L~~~g-~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 111 (569)
-++.+-.++ .+=||++ +-+..+...+.+.| +.+|+.|.. ...+-.-..+.++|...|..+..+-|...+.....
T Consensus 27 ~~i~~K~E~~nptGS~K~--R~a~~~~~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~ 103 (296)
T PRK11761 27 NTILAKLEGNNPAGSVKD--RPALSMIVQAEKRGEIKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRA 103 (296)
T ss_pred CEEEEEEcccCCCCCchh--HHHHHHHHHHHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHH
Confidence 356666655 3444544 33333333444455 467777655 34444556666788889987777766655667788
Q ss_pred HHhcCCceEEEEcc
Q 008342 112 ILSHASSAVVIVDQ 125 (569)
Q Consensus 112 ~l~~~~~~~vi~~~ 125 (569)
.++.+++++++++.
T Consensus 104 ~~~~~GA~v~~~~~ 117 (296)
T PRK11761 104 AMRAYGAELILVPK 117 (296)
T ss_pred HHHHcCCEEEEeCC
Confidence 99999999999986
No 173
>PLN03102 acyl-activating enzyme; Provisional
Probab=52.88 E-value=77 Score=33.94 Aligned_cols=82 Identities=6% Similarity=-0.022 Sum_probs=57.2
Q ss_pred eecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEee
Q 008342 214 VVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFCA 289 (569)
Q Consensus 214 ~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~ 289 (569)
.+|...+...+..... ..++.++|++...+|-.-.+ ....+++...|+..+.+ +..+++++...+++.+++.++.
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~-~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~ 117 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAM-YEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFV 117 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHH-HHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEE
Confidence 4788887766655544 45899999999888853322 23344455556655555 4578899999999999999998
Q ss_pred hHHHHHH
Q 008342 290 APVVLNA 296 (569)
Q Consensus 290 ~P~~~~~ 296 (569)
.+.....
T Consensus 118 ~~~~~~~ 124 (579)
T PLN03102 118 DRSFEPL 124 (579)
T ss_pred ChhhHHH
Confidence 7655443
No 174
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=52.86 E-value=2.6e+02 Score=28.23 Aligned_cols=67 Identities=13% Similarity=0.042 Sum_probs=44.8
Q ss_pred HHHHHHHHhc---CCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEc
Q 008342 56 RRFASALSKL---SIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVD 124 (569)
Q Consensus 56 ~~la~~L~~~---g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 124 (569)
+.+|.++.+. .+.+.+-|.+-.....-...++.+++..|=.++..+|.++.- ...+..++.+.+.+.
T Consensus 72 eaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a~~~pGDeVlip~P~Y~~y--~~~~~~~gg~~v~v~ 141 (393)
T COG0436 72 EAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVLIPDPGYPSY--EAAVKLAGGKPVPVP 141 (393)
T ss_pred HHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCcCH--HHHHHhcCCEEEEEe
Confidence 3455555542 355555577777777778888889999998777778887763 344555566666654
No 175
>PLN02565 cysteine synthase
Probab=52.61 E-value=2.3e+02 Score=27.64 Aligned_cols=89 Identities=13% Similarity=0.024 Sum_probs=58.3
Q ss_pred ceeeeeCC--eeeeHHHHHHHHHHHHHHHHhcCC-CCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHH
Q 008342 36 RKSVVYGS--KHYTWHQTYRRCRRFASALSKLSI-GLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFI 112 (569)
Q Consensus 36 ~~a~~~~~--~~~Ty~el~~~~~~la~~L~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 112 (569)
++.+-.+. .+-||++ +-+..+-..+.+.|. .+|....+.....-.-+...++|...|..+..+-|...+..-...
T Consensus 31 ~i~~K~E~~nPtGSfKd--R~A~~~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~ 108 (322)
T PLN02565 31 RIAAKLEMMEPCSSVKD--RIGYSMITDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRII 108 (322)
T ss_pred eEEEEecccCCccchHH--HHHHHHHHHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHH
Confidence 56666554 3344443 233333344445564 778554444445555566667788899988777777677777889
Q ss_pred HhcCCceEEEEccc
Q 008342 113 LSHASSAVVIVDQE 126 (569)
Q Consensus 113 l~~~~~~~vi~~~~ 126 (569)
++.++++++++++.
T Consensus 109 i~~~GA~V~~~~~~ 122 (322)
T PLN02565 109 LLAFGAELVLTDPA 122 (322)
T ss_pred HHHcCCEEEEeCCC
Confidence 99999999999864
No 176
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=52.61 E-value=53 Score=23.89 Aligned_cols=66 Identities=11% Similarity=0.118 Sum_probs=51.1
Q ss_pred eeeeHHHHHHHHHHHHH---HHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceE
Q 008342 44 KHYTWHQTYRRCRRFAS---ALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAV 120 (569)
Q Consensus 44 ~~~Ty~el~~~~~~la~---~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 120 (569)
...||+||.+.-+.++. .|.+..++..|-|+|+.=++...+ -++.++...+.+++...++..++++
T Consensus 8 gi~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~Sy-----------~V~Fl~~~~s~eev~~ele~mga~i 76 (88)
T COG4009 8 GIATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTSSY-----------YVVFLEEVESEEEVERELEDMGAEI 76 (88)
T ss_pred hheeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCceeE-----------EEEEEeccCCHHHHHHHHHHhCchh
Confidence 35799999988877665 466678888999999877665432 4577888889999999999888765
No 177
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=51.92 E-value=1.2e+02 Score=32.23 Aligned_cols=96 Identities=9% Similarity=0.034 Sum_probs=66.6
Q ss_pred CCCceeeeeC--C-------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCch-hHHHHHHHhhhcCceEeeccc
Q 008342 33 HPTRKSVVYG--S-------KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVP-AMYEAQFGAPMAGAVLNSINI 102 (569)
Q Consensus 33 ~p~~~a~~~~--~-------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~ 102 (569)
.++.++++.. + -.+|+..+...+..... ..++.++|++...+|-.. ..+...++.+..|+..+.. +
T Consensus 170 ~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~-~ 245 (563)
T PLN02860 170 APDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIA---IVGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL-P 245 (563)
T ss_pred CCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHh---hcCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec-C
Confidence 4566666543 1 35788877655444332 357888998888777533 2234567788888887665 5
Q ss_pred cCCHHHHHHHHhcCCceEEEEcccchHHHH
Q 008342 103 RLNATVVAFILSHASSAVVIVDQEFFSLAE 132 (569)
Q Consensus 103 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 132 (569)
......+...+++.++.+++..+.....+.
T Consensus 246 ~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~ 275 (563)
T PLN02860 246 KFDAKAALQAIKQHNVTSMITVPAMMADLI 275 (563)
T ss_pred CCCHHHHHHHHHHhCCeeEEeChHHHHHHH
Confidence 678899999999999999998887655443
No 178
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=51.27 E-value=55 Score=28.62 Aligned_cols=57 Identities=21% Similarity=0.241 Sum_probs=38.2
Q ss_pred chHHHHHHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCCC
Q 008342 464 SSVEVEKVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMPS 527 (569)
Q Consensus 464 ~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 527 (569)
-...|+..+.+.++|.++.|+...+. .++-|.+... ....+....++.+.+++..|.
T Consensus 76 ~a~~i~~~v~~~~~V~~A~vvv~~~~-----a~Vav~~~~~--~~~~~~i~~~V~~~v~~~~p~ 132 (177)
T PF09580_consen 76 LADRIANRVKKVPGVEDATVVVTDDN-----AYVAVDLDFN--RFNTKKIKKKVEKAVKSADPR 132 (177)
T ss_pred HHHHHHHHHhcCCCceEEEEEEECCE-----EEEEEEeccc--ccchhHHHHHHHHHHHHhCCC
Confidence 35678888899999999999987444 4444555522 222233667777777776765
No 179
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=50.89 E-value=53 Score=28.27 Aligned_cols=90 Identities=11% Similarity=-0.033 Sum_probs=56.7
Q ss_pred HHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCC-chhHHHHHHHhhhcC--ceEeeccc
Q 008342 26 INRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPN-VPAMYEAQFGAPMAG--AVLNSINI 102 (569)
Q Consensus 26 l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~-~~~~~~~~lA~~~~G--~~~v~l~~ 102 (569)
|-||++..+..+.+.+.++.+| .+=...+.++|++|..+|+. -|+|...-.- ..+..-.+..++... .++--+.|
T Consensus 6 LmRHgkA~~~~~~~~D~dR~Lt-~~G~~ea~~~a~~L~~~~~~-~D~VL~Spa~Ra~QTae~v~~~~~~~~~~~~~~l~p 83 (163)
T COG2062 6 LMRHGKAEWAAPGIADFDRPLT-ERGRKEAELVAAWLAGQGVE-PDLVLVSPAVRARQTAEIVAEHLGEKKVEVFEELLP 83 (163)
T ss_pred EeecccccccCCCCCCccCcCC-HHHHHHHHHHHHHHHhcCCC-CCEEEeChhHHHHHHHHHHHHhhCcccceeccccCC
Confidence 4577888888888889999999 55566789999999999884 4566542221 223333333333322 33344455
Q ss_pred cCCHHHHHHHHhcCC
Q 008342 103 RLNATVVAFILSHAS 117 (569)
Q Consensus 103 ~~~~~~l~~~l~~~~ 117 (569)
.-.+..+...|+...
T Consensus 84 ~~d~~~~l~~l~~~~ 98 (163)
T COG2062 84 NGDPGTVLDYLEALG 98 (163)
T ss_pred CCCHHHHHHHHHHhc
Confidence 666666666666554
No 180
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=50.72 E-value=1.5e+02 Score=32.11 Aligned_cols=95 Identities=13% Similarity=-0.004 Sum_probs=63.0
Q ss_pred cCceEEEEeccCCCCCCcceeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-cc
Q 008342 194 EWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQ 269 (569)
Q Consensus 194 ~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~ 269 (569)
++.++++... ..+|. ...+|...+......... ..+++++|++...+|....+ ....+++...|+..+.+ +.
T Consensus 71 p~~~Al~~~~-~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~Gav~v~i~~~ 146 (625)
T TIGR02188 71 PDKVAIIWEG-DEPGE--VRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEA-AIAMLACARIGAIHSVVFGG 146 (625)
T ss_pred CCCeEEEEEc-CCCCc--eEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCCEEeccCCC
Confidence 4456665432 11222 346788887666555444 45899999999998864322 34445555666666655 56
Q ss_pred CChHHHHHHHHhcCccEEeehHH
Q 008342 270 VTAKAVYTAIATHGVTHFCAAPV 292 (569)
Q Consensus 270 ~~~~~~~~~i~~~~~t~l~~~P~ 292 (569)
+.++++...+++.+++.++....
T Consensus 147 ~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 147 FSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CCHHHHHHHHHhcCCCEEEEcCc
Confidence 78899999999999999987653
No 181
>PRK07529 AMP-binding domain protein; Validated
Probab=49.78 E-value=1.3e+02 Score=32.53 Aligned_cols=94 Identities=10% Similarity=0.010 Sum_probs=60.4
Q ss_pred cCceEEEEeccCCCCCCcceeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-cc
Q 008342 194 EWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQ 269 (569)
Q Consensus 194 ~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~ 269 (569)
++.++++....+.. ..+...+|++.+......... ..+++++|++...+|-...+ ....+++...| ..+.+ +.
T Consensus 39 p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~-~~~~lA~~~~G-i~~pi~~~ 115 (632)
T PRK07529 39 PDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPET-HFALWGGEAAG-IANPINPL 115 (632)
T ss_pred CCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhC-EEEeCCCc
Confidence 34556655432211 123456888887666555444 45899999999999865433 23344444444 44433 45
Q ss_pred CChHHHHHHHHhcCccEEeeh
Q 008342 270 VTAKAVYTAIATHGVTHFCAA 290 (569)
Q Consensus 270 ~~~~~~~~~i~~~~~t~l~~~ 290 (569)
..++++...+++.++..++..
T Consensus 116 ~~~~~i~~~l~~~~~~~li~~ 136 (632)
T PRK07529 116 LEPEQIAELLRAAGAKVLVTL 136 (632)
T ss_pred CCHHHHHHHHHhcCCcEEEEe
Confidence 788999999999999999885
No 182
>PRK08308 acyl-CoA synthetase; Validated
Probab=49.54 E-value=1.7e+02 Score=29.54 Aligned_cols=84 Identities=15% Similarity=0.179 Sum_probs=60.9
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCch--hHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEE
Q 008342 44 KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVP--AMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVV 121 (569)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 121 (569)
-.+|++.+...+..+...+ ++..+|++...+|-.. .++..++.++..|+..+..+ ..++..+...+++.++.++
T Consensus 119 v~~s~~~l~~~~~~~~~~~---~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~~ 194 (414)
T PRK08308 119 IRRSWTEIDREIEAYNEAL---NCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT-NKNPKFALNILRNTPQHIL 194 (414)
T ss_pred EEEehHhHHHHHHHHHHhh---CCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC-CCCHHHHHHHHHHhCCeEE
Confidence 4589988887666555443 5677888877777543 34556788889999877664 4567888889999999988
Q ss_pred EEcccchHHH
Q 008342 122 IVDQEFFSLA 131 (569)
Q Consensus 122 i~~~~~~~~~ 131 (569)
+..+.....+
T Consensus 195 ~~~P~~~~~l 204 (414)
T PRK08308 195 YAVPLMLHIL 204 (414)
T ss_pred EcCHHHHHHH
Confidence 8776655443
No 183
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=49.54 E-value=1.3e+02 Score=31.01 Aligned_cols=83 Identities=8% Similarity=0.075 Sum_probs=59.8
Q ss_pred eeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCch-hHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEE
Q 008342 45 HYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVP-AMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIV 123 (569)
Q Consensus 45 ~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 123 (569)
.+|++.+...+... ....++.++|++...+|-.. ..+..+++.+..|+..+..+ ..+...+...+++.++.++..
T Consensus 160 ~~s~~~~~~~~~~~---~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 235 (483)
T PRK03640 160 IQTYGNHWWSAVGS---ALNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE-KFDAEKINKLLQTGGVTIISV 235 (483)
T ss_pred EEecHHHHHHHHHH---HHhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHhCCcEEEe
Confidence 58888776544332 23358899999999887532 22344577778899877664 568899999999999999998
Q ss_pred cccchHHH
Q 008342 124 DQEFFSLA 131 (569)
Q Consensus 124 ~~~~~~~~ 131 (569)
.+.....+
T Consensus 236 ~P~~~~~l 243 (483)
T PRK03640 236 VSTMLQRL 243 (483)
T ss_pred HHHHHHHH
Confidence 88765544
No 184
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=49.12 E-value=1.2e+02 Score=32.07 Aligned_cols=85 Identities=11% Similarity=0.009 Sum_probs=61.6
Q ss_pred eecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEee
Q 008342 214 VVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFCA 289 (569)
Q Consensus 214 ~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~ 289 (569)
.+|...+......... ..++.+++++....+-...+ +...+++...|+..+.+ +....+++...+++.+++.++.
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~ 124 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEF-LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVV 124 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEE
Confidence 5788887666655554 34788999998887765433 34455556667666666 4567899999999999999999
Q ss_pred hHHHHHHHHc
Q 008342 290 APVVLNAIAN 299 (569)
Q Consensus 290 ~P~~~~~l~~ 299 (569)
.+..+..+..
T Consensus 125 ~~~~~~~~~~ 134 (542)
T PRK06155 125 EAALLAALEA 134 (542)
T ss_pred ChhhHHHHHH
Confidence 8877766543
No 185
>PRK07788 acyl-CoA synthetase; Validated
Probab=49.02 E-value=1.1e+02 Score=32.36 Aligned_cols=84 Identities=11% Similarity=-0.015 Sum_probs=59.1
Q ss_pred eecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEec-cCChHHHHHHHHhcCccEEee
Q 008342 214 VVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICLR-QVTAKAVYTAIATHGVTHFCA 289 (569)
Q Consensus 214 ~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 289 (569)
.+|++.+...+..... ..++.++|++...++-.- --....++++..|+..+.++ ....+++...+++.+++.++.
T Consensus 74 ~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 152 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHR-GFVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVY 152 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEE
Confidence 5788887666555444 447889999988876532 22334455556666666664 467889999999999999999
Q ss_pred hHHHHHHHH
Q 008342 290 APVVLNAIA 298 (569)
Q Consensus 290 ~P~~~~~l~ 298 (569)
.+.....+.
T Consensus 153 ~~~~~~~~~ 161 (549)
T PRK07788 153 DDEFTDLLS 161 (549)
T ss_pred CchhHHHHH
Confidence 887766553
No 186
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=48.79 E-value=1.3e+02 Score=32.82 Aligned_cols=85 Identities=15% Similarity=-0.030 Sum_probs=59.9
Q ss_pred eeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEe
Q 008342 213 VVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFC 288 (569)
Q Consensus 213 v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~ 288 (569)
..+|++.+...+..... ..|+.++|++...++-+.-+ +...++++..|+..+.+ +....+++...+++.++++++
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~ 154 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEW-IIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAF 154 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEE
Confidence 45788887766655554 45899999999888764322 23344555566666655 457789999999999999999
Q ss_pred ehHHHHHHHH
Q 008342 289 AAPVVLNAIA 298 (569)
Q Consensus 289 ~~P~~~~~l~ 298 (569)
.....+..+.
T Consensus 155 ~~~~~~~~~~ 164 (660)
T PLN02861 155 VQESKISSIL 164 (660)
T ss_pred ECHHHHHHHH
Confidence 8776655543
No 187
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=48.78 E-value=1.6e+02 Score=31.90 Aligned_cols=80 Identities=15% Similarity=0.060 Sum_probs=57.2
Q ss_pred ceeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEE
Q 008342 212 GVVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHF 287 (569)
Q Consensus 212 ~v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l 287 (569)
...+|++.+......... ..++.++|++...+|-.-.+ ....+++...|+..+.+ +.+.++++...+++.++..+
T Consensus 96 ~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~l 174 (637)
T PRK00174 96 SRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEA-AVAMLACARIGAVHSVVFGGFSAEALADRIIDAGAKLV 174 (637)
T ss_pred eEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCCcEE
Confidence 456899988777655554 45889999999888764322 33444555666666655 45788999999999999999
Q ss_pred eehHH
Q 008342 288 CAAPV 292 (569)
Q Consensus 288 ~~~P~ 292 (569)
+....
T Consensus 175 i~~~~ 179 (637)
T PRK00174 175 ITADE 179 (637)
T ss_pred EEcCc
Confidence 87543
No 188
>PRK06381 threonine synthase; Validated
Probab=48.70 E-value=1.9e+02 Score=28.20 Aligned_cols=99 Identities=8% Similarity=0.011 Sum_probs=59.2
Q ss_pred HHHhhhhCC-CceeeeeCCee--eeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccc
Q 008342 26 INRAATLHP-TRKSVVYGSKH--YTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINI 102 (569)
Q Consensus 26 l~~~a~~~p-~~~a~~~~~~~--~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~ 102 (569)
+++..+... .++.+-.++.+ =||++ +.+..+...+.+.|. +.|. .....-.-..+.++|...|..+..+-|
T Consensus 21 ~~~l~~~~G~~~i~~K~E~~nptGS~K~--R~a~~~l~~a~~~g~---~~lv-~aSsGN~g~alA~~aa~~G~~~~ivvp 94 (319)
T PRK06381 21 ARKLEEELGLRKIYLKFEGANPTGTQKD--RIAEAHVRRAMRLGY---SGIT-VGTCGNYGASIAYFARLYGLKAVIFIP 94 (319)
T ss_pred hHhhHHhcCCceEEEEecCCCCccCcHH--HHHHHHHHHHHHcCC---CEEE-EeCCcHHHHHHHHHHHHcCCcEEEEEC
Confidence 334333333 46777776633 33433 222233333444442 3443 344556667777888899987776666
Q ss_pred cCCHHHHHHHHhcCCceEEEEcccchHH
Q 008342 103 RLNATVVAFILSHASSAVVIVDQEFFSL 130 (569)
Q Consensus 103 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 130 (569)
...+......++.++++++++..+....
T Consensus 95 ~~~~~~~~~~l~~~GA~V~~~~~~~~~~ 122 (319)
T PRK06381 95 RSYSNSRVKEMEKYGAEIIYVDGKYEEA 122 (319)
T ss_pred CCCCHHHHHHHHHcCCEEEEcCCCHHHH
Confidence 5555566678999999999998764433
No 189
>PRK08316 acyl-CoA synthetase; Validated
Probab=48.61 E-value=1.5e+02 Score=30.97 Aligned_cols=85 Identities=9% Similarity=-0.070 Sum_probs=59.8
Q ss_pred eeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEe
Q 008342 213 VVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFC 288 (569)
Q Consensus 213 v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~ 288 (569)
..+|+..+...+..... ..++.+++++....+-... .+...+++...|+..+.+ +.....++...+++.++..++
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~-~~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 113 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDA-YALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAFL 113 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEEE
Confidence 55788887666555444 3478899999988776443 344455566666666655 356788899999999999999
Q ss_pred ehHHHHHHHH
Q 008342 289 AAPVVLNAIA 298 (569)
Q Consensus 289 ~~P~~~~~l~ 298 (569)
........+.
T Consensus 114 ~~~~~~~~~~ 123 (523)
T PRK08316 114 VDPALAPTAE 123 (523)
T ss_pred EccchHHHHH
Confidence 8877665553
No 190
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=48.26 E-value=2e+02 Score=31.46 Aligned_cols=84 Identities=11% Similarity=-0.074 Sum_probs=57.8
Q ss_pred eecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEee
Q 008342 214 VVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFCA 289 (569)
Q Consensus 214 ~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~ 289 (569)
.+|++.+...+..... ..++.++|++...++-+.-. ....+++...|+..+.+ +...++++...+++.++++++.
T Consensus 76 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~ 154 (660)
T PLN02430 76 WKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQW-IVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFV 154 (660)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEE
Confidence 4688877766655444 45899999998888764322 22344455556655555 5678899999999999999998
Q ss_pred hHHHHHHHH
Q 008342 290 APVVLNAIA 298 (569)
Q Consensus 290 ~P~~~~~l~ 298 (569)
....+..++
T Consensus 155 ~~~~~~~~~ 163 (660)
T PLN02430 155 QDKKIKELL 163 (660)
T ss_pred CHHHHHHHH
Confidence 776544443
No 191
>PRK10877 protein disulfide isomerase II DsbC; Provisional
Probab=47.56 E-value=1.3e+02 Score=27.80 Aligned_cols=90 Identities=14% Similarity=0.105 Sum_probs=46.4
Q ss_pred CceeEEcCCCeEEEecccCceEEeCce---eechHHHHHHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcchhhhh
Q 008342 435 GDLAVKHPDNYIEIKDRLKDVIISGGE---NISSVEVEKVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADELDKG 511 (569)
Q Consensus 435 GD~~~~~~~g~l~~~GR~~d~i~~~G~---~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~ 511 (569)
|++.+.++||.+.|.|.. +...+. ++.-...+..+..++ .+..+++.++ ..-.+++|.-+..+
T Consensus 55 ~~i~Y~~~dg~y~i~G~l---~d~~~~~~~~~t~~~~~~~~~~l~--~~~i~~g~~~--~k~~I~vFtDp~Cp------- 120 (232)
T PRK10877 55 SGVLYITDDGKHIIQGPM---YDVSGTAPVNVTNQLLLKKLNALE--KEMIVYKAPQ--EKHVITVFTDITCG------- 120 (232)
T ss_pred CeEEEEcCCCCEEEeeee---EecCCCCCCChHHHHHHHHHHhhh--hhcEEecCCC--CCEEEEEEECCCCh-------
Confidence 457888899999999864 444332 333333334444444 3455555432 22334444444433
Q ss_pred hHHHHHHHHHHhcCCCCcCCceEEeccCCCC
Q 008342 512 KLAEDVSKFCRAKMPSYWVPKSVVFAALPKS 542 (569)
Q Consensus 512 ~~~~~l~~~~~~~l~~~~~p~~i~~~~lP~t 542 (569)
-++++.+.+.+.... . ..+.+..+|+.
T Consensus 121 -yCkkl~~~l~~~~~~-~--v~v~~~~~P~~ 147 (232)
T PRK10877 121 -YCHKLHEQMKDYNAL-G--ITVRYLAFPRQ 147 (232)
T ss_pred -HHHHHHHHHHHHhcC-C--eEEEEEeccCC
Confidence 455666655543321 1 23344457764
No 192
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=46.33 E-value=1.8e+02 Score=31.54 Aligned_cols=78 Identities=13% Similarity=0.024 Sum_probs=55.6
Q ss_pred eeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEe
Q 008342 213 VVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFC 288 (569)
Q Consensus 213 v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~ 288 (569)
-.+|.+.+...+..... ..|+.++|++...+|..-- .....+++...|+..+.+ +.+...++...+++.++.+++
T Consensus 82 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e-~v~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li 160 (628)
T TIGR02316 82 RTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAE-AVFAMLACARIGAIHSVVFGGFASHSLALRIDDATPKLIV 160 (628)
T ss_pred EEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEE
Confidence 35788887666554444 4589999999999987432 233444555566665555 567889999999999999988
Q ss_pred ehH
Q 008342 289 AAP 291 (569)
Q Consensus 289 ~~P 291 (569)
...
T Consensus 161 ~~~ 163 (628)
T TIGR02316 161 SAD 163 (628)
T ss_pred ECC
Confidence 754
No 193
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=46.11 E-value=1.2e+02 Score=27.52 Aligned_cols=90 Identities=16% Similarity=0.171 Sum_probs=54.7
Q ss_pred CcEEEEcCCc-cchhhHHHHHHHHHhcceEEE-e-ccCChHHHHHHHHhcCccEEeehHHH---HH---HHHccCCCCCC
Q 008342 236 GAVFLWTLPM-FHGNGWSYTWSLAALCGTSIC-L-RQVTAKAVYTAIATHGVTHFCAAPVV---LN---AIANASPEDTI 306 (569)
Q Consensus 236 ~d~~~~~~p~-~~~~g~~~~~~~~~~g~~~~~-~-~~~~~~~~~~~i~~~~~t~l~~~P~~---~~---~l~~~~~~~~~ 306 (569)
+.+++.+.+- .|..|....-..+-..|--++ + ....++++.+.+.+++++++..+-.+ +. .+.+......
T Consensus 89 ~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~~- 167 (213)
T cd02069 89 GKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRRG- 167 (213)
T ss_pred CeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhcC-
Confidence 3444444443 688887655555555554444 4 34678999999999999987664332 22 2222211111
Q ss_pred CCcccceeeeecCCCCCHHHHHHh
Q 008342 307 LPLTNVVNVNTAGAPPPPSLLFAM 330 (569)
Q Consensus 307 ~~l~~l~~~~~~g~~l~~~~~~~~ 330 (569)
. .+ .+++||.+++++..+..
T Consensus 168 --~-~~-~i~vGG~~~~~~~~~~~ 187 (213)
T cd02069 168 --I-KI-PLLIGGAATSRKHTAVK 187 (213)
T ss_pred --C-CC-eEEEEChhcCHHHHhhh
Confidence 1 22 37899999999888764
No 194
>PRK06164 acyl-CoA synthetase; Validated
Probab=45.69 E-value=1.6e+02 Score=31.06 Aligned_cols=94 Identities=17% Similarity=0.156 Sum_probs=68.3
Q ss_pred CCceeeeeC--C-------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCch-hHHHHHHHhhhcCceEeecccc
Q 008342 34 PTRKSVVYG--S-------KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVP-AMYEAQFGAPMAGAVLNSINIR 103 (569)
Q Consensus 34 p~~~a~~~~--~-------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~ 103 (569)
++.++++.. + -.+|...+...+..++..+ ++.+++++...+|-+. ..+..+++.+..|+..+.. +.
T Consensus 180 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~ 255 (540)
T PRK06164 180 PDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY---GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE-PV 255 (540)
T ss_pred CCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc---CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec-CC
Confidence 566676652 1 3578888877766666555 6788999988887643 2345678888889887765 56
Q ss_pred CCHHHHHHHHhcCCceEEEEcccchHHH
Q 008342 104 LNATVVAFILSHASSAVVIVDQEFFSLA 131 (569)
Q Consensus 104 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 131 (569)
.....+...|++.++.+++..+.....+
T Consensus 256 ~~~~~~~~~l~~~~~t~~~~~p~~l~~l 283 (540)
T PRK06164 256 FDAARTARALRRHRVTHTFGNDEMLRRI 283 (540)
T ss_pred CCHHHHHHHHHHhCCeeecCCHHHHHHH
Confidence 6788999999999999998877655444
No 195
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=45.37 E-value=1.8e+02 Score=30.69 Aligned_cols=82 Identities=10% Similarity=-0.008 Sum_probs=55.6
Q ss_pred CcceeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCcc
Q 008342 210 PKGVVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVT 285 (569)
Q Consensus 210 pk~v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t 285 (569)
++...+|...+...+..... ..++.+++++...++-...+ ....+++...|+..+.+ +....+++...++..++.
T Consensus 51 ~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~-~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~ 129 (547)
T PRK13295 51 GAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEF-TVLYLACSRIGAVLNPLMPIFRERELSFMLKHAESK 129 (547)
T ss_pred cccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHH-HHHHHHHHhcCcEEeccccccCHHHHHHHHHhcCce
Confidence 34456888887666555444 45889999999888764433 33344455556555555 446778899999999999
Q ss_pred EEeehHH
Q 008342 286 HFCAAPV 292 (569)
Q Consensus 286 ~l~~~P~ 292 (569)
.++....
T Consensus 130 ~li~~~~ 136 (547)
T PRK13295 130 VLVVPKT 136 (547)
T ss_pred EEEEecc
Confidence 9887553
No 196
>PRK07638 acyl-CoA synthetase; Validated
Probab=44.88 E-value=1.4e+02 Score=30.84 Aligned_cols=85 Identities=7% Similarity=-0.015 Sum_probs=60.9
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchh-HHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEE
Q 008342 44 KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPA-MYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVI 122 (569)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 122 (569)
-.+|.+.+...+...+. ..+++++|++....+-... ++...+..+..|++.+.. +..++..+...+++.++.++.
T Consensus 161 v~~s~~~~~~~~~~~~~---~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 236 (487)
T PRK07638 161 FLRAQQSWLHSFDCNVH---DFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVMY 236 (487)
T ss_pred EEEecHHHHHHHHHHHH---hcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEEE
Confidence 35777777665554433 4467889998877665433 345566777889887755 567889999999999999999
Q ss_pred EcccchHHHH
Q 008342 123 VDQEFFSLAE 132 (569)
Q Consensus 123 ~~~~~~~~~~ 132 (569)
..+.....+.
T Consensus 237 ~~P~~~~~l~ 246 (487)
T PRK07638 237 TVPTMLESLY 246 (487)
T ss_pred eCcHHHHHHH
Confidence 9887655443
No 197
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=44.55 E-value=83 Score=33.18 Aligned_cols=88 Identities=13% Similarity=0.010 Sum_probs=65.4
Q ss_pred ceeecchHHHHHHHHhHhHh-----CCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCcc
Q 008342 212 GVVVSHRGAYLMSLNGALIW-----GMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVT 285 (569)
Q Consensus 212 ~v~~t~~~~~~~~~~~~~~~-----~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t 285 (569)
+..+|+..+...+......+ +++.+|++...+|-+..+. ...++++..|+..... +.++..++...++..++.
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~-~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~k 121 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFV-ELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPK 121 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCccccccCcccCHHHHHHHHHhcCCe
Confidence 78899998877776655544 3788999999998754442 3344555566655555 568899999999999999
Q ss_pred EEeehHHHHHHHHcc
Q 008342 286 HFCAAPVVLNAIANA 300 (569)
Q Consensus 286 ~l~~~P~~~~~l~~~ 300 (569)
+++.....+..+...
T Consensus 122 iif~d~~~~~~i~~~ 136 (537)
T KOG1176|consen 122 LIFVDEDFYDKISEA 136 (537)
T ss_pred EEEEcCchHHHHHHH
Confidence 999988877777544
No 198
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=44.50 E-value=89 Score=31.32 Aligned_cols=59 Identities=17% Similarity=0.243 Sum_probs=35.5
Q ss_pred HHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeecccc-----CCHHHHHHHHhcCCceEEEEc
Q 008342 62 LSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIR-----LNATVVAFILSHASSAVVIVD 124 (569)
Q Consensus 62 L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~~ 124 (569)
+...++++||.|.+-.+. +.....++...|+.+++++.+ .+.+.+...+.. +.++|+..
T Consensus 63 l~al~~~pGd~Viv~~~t---~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~ 126 (376)
T TIGR02379 63 ALLLDIQPGDEVIMPSYT---FVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPV 126 (376)
T ss_pred HHHcCCCCcCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEe
Confidence 334467889988764443 334445556778877776543 345666666643 56666644
No 199
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=44.45 E-value=1.4e+02 Score=31.47 Aligned_cols=96 Identities=14% Similarity=0.010 Sum_probs=62.8
Q ss_pred ceEEEEeccCCCCCCcceeecchHHHHHHHHhHhH----hCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccC
Q 008342 196 QSIALGYTSGTTASPKGVVVSHRGAYLMSLNGALI----WGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQV 270 (569)
Q Consensus 196 ~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~~----~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~ 270 (569)
+...++|-+-.++. -.+|.+.+.......... .+. ++|++...+|..--. ...++++.-.|+..... +.+
T Consensus 25 ~~~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~-~~a~LA~~riGAI~~~vf~~f 99 (528)
T COG0365 25 DDTAIIFDGEDGLF---RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEA-VIALLATARIGAIPAVVSPGL 99 (528)
T ss_pred CceEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHH-HHHHHHHHHcCCEEeecccCC
Confidence 34455565544444 667888776665444443 456 999999999985433 23334444445544433 679
Q ss_pred ChHHHHHHHHhcCccEEeehHHHHHH
Q 008342 271 TAKAVYTAIATHGVTHFCAAPVVLNA 296 (569)
Q Consensus 271 ~~~~~~~~i~~~~~t~l~~~P~~~~~ 296 (569)
.++.+..-|.+.++.++++....++.
T Consensus 100 ~~~al~~Ri~d~~~k~vit~d~~~~~ 125 (528)
T COG0365 100 SAEAVADRIADLGPKVLIADDGTFRN 125 (528)
T ss_pred CHHHHHHHHHccCCCEEEEecccccc
Confidence 99999999999999999876665543
No 200
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=44.11 E-value=1.3e+02 Score=25.83 Aligned_cols=57 Identities=18% Similarity=0.061 Sum_probs=33.7
Q ss_pred hHHHHHHHhcCCCceeeEEEeecCCCCCceeeEEEEecCCcchhhhhhHHHHHHHHHHhcCC
Q 008342 465 SVEVEKVLYLHPLVLEAAVVARPDERWGESPCAFVTLKPEADELDKGKLAEDVSKFCRAKMP 526 (569)
Q Consensus 465 ~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~ 526 (569)
...|...+.+.|+|.++.++...+. .++-+.+.......-.+....++.+.+++.-|
T Consensus 56 A~~Ia~~v~~v~~V~dA~vvVtg~~-----A~Vgv~~~~~~~~~~~~~iK~~Va~~Vk~~dp 112 (158)
T TIGR02898 56 ADEIASEAAKVKGVKDATVVITGNY-----AYVGVDLTNGLEGSVTDELKEKVAETVKSTDN 112 (158)
T ss_pred HHHHHHHHhcCCCCceEEEEEECCE-----EEEEEEcCCCcchhhHHHHHHHHHHHHHhhCC
Confidence 4567788889999999999887444 33444444443322222344555555555343
No 201
>PRK05857 acyl-CoA synthetase; Validated
Probab=44.03 E-value=1.6e+02 Score=31.04 Aligned_cols=80 Identities=11% Similarity=-0.051 Sum_probs=56.3
Q ss_pred eeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEe
Q 008342 213 VVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFC 288 (569)
Q Consensus 213 v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~ 288 (569)
..+|...+......... ..++.+++++...++-+..+ +...++++..|+..+.+ .....+++...++..++..++
T Consensus 40 ~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~-~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii 118 (540)
T PRK05857 40 SALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPET-YLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAAL 118 (540)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHH-HHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEE
Confidence 45788888766655554 34788999999888764333 34455555666666655 346788899999999999888
Q ss_pred ehHHH
Q 008342 289 AAPVV 293 (569)
Q Consensus 289 ~~P~~ 293 (569)
..+..
T Consensus 119 ~~~~~ 123 (540)
T PRK05857 119 VAPGS 123 (540)
T ss_pred Eeccc
Confidence 87654
No 202
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=43.58 E-value=2.2e+02 Score=30.86 Aligned_cols=78 Identities=13% Similarity=0.032 Sum_probs=54.9
Q ss_pred eeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEe
Q 008342 213 VVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFC 288 (569)
Q Consensus 213 v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~ 288 (569)
-.+|.+.+...+..... ..+++++|++...+|..--. ....++++..|+..+.+ +.+.+.++...+++.++..++
T Consensus 83 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li 161 (629)
T PRK10524 83 RTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEA-AFAMLACARIGAIHSVVFGGFASHSLAARIDDAKPVLIV 161 (629)
T ss_pred EEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCcEEE
Confidence 45788887666544444 45899999999998764322 33444555566655555 557889999999999999998
Q ss_pred ehH
Q 008342 289 AAP 291 (569)
Q Consensus 289 ~~P 291 (569)
+..
T Consensus 162 ~~~ 164 (629)
T PRK10524 162 SAD 164 (629)
T ss_pred Ecc
Confidence 754
No 203
>PRK07798 acyl-CoA synthetase; Validated
Probab=43.51 E-value=3.6e+02 Score=28.09 Aligned_cols=86 Identities=5% Similarity=-0.121 Sum_probs=57.5
Q ss_pred eeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHH-HHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEE
Q 008342 213 VVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWS-YTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHF 287 (569)
Q Consensus 213 v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~-~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l 287 (569)
-.+|+..+......... ..++.++|++....+-. ..+. ..++++..|+..+.+ +.....++...+++.++..+
T Consensus 27 ~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~--~~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~ 104 (533)
T PRK07798 27 RRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNR--IEYVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVAL 104 (533)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC--HHHHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEE
Confidence 35788877665544443 45788999988877543 3333 334444455555545 44677889999999999999
Q ss_pred eehHHHHHHHHcc
Q 008342 288 CAAPVVLNAIANA 300 (569)
Q Consensus 288 ~~~P~~~~~l~~~ 300 (569)
+........+...
T Consensus 105 ~~~~~~~~~~~~~ 117 (533)
T PRK07798 105 VYEREFAPRVAEV 117 (533)
T ss_pred EEchhhHHHHHHH
Confidence 9988766665443
No 204
>PRK06839 acyl-CoA synthetase; Validated
Probab=43.35 E-value=3e+02 Score=28.42 Aligned_cols=86 Identities=9% Similarity=-0.001 Sum_probs=59.1
Q ss_pred ceeecchHHHHHHHHhHhH----hCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEec-cCChHHHHHHHHhcCccE
Q 008342 212 GVVVSHRGAYLMSLNGALI----WGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICLR-QVTAKAVYTAIATHGVTH 286 (569)
Q Consensus 212 ~v~~t~~~~~~~~~~~~~~----~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~ 286 (569)
...+|+..+.......... .++.+++++...++-+.. .....+++...|...+.+. ..++.++...+++.+++.
T Consensus 25 ~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~-~~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~ 103 (496)
T PRK06839 25 EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLE-YIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTV 103 (496)
T ss_pred CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCceE
Confidence 3567888887666555543 478899999888876533 2233444445565555553 467888999999999999
Q ss_pred EeehHHHHHHHH
Q 008342 287 FCAAPVVLNAIA 298 (569)
Q Consensus 287 l~~~P~~~~~l~ 298 (569)
++..+.....+.
T Consensus 104 i~~~~~~~~~~~ 115 (496)
T PRK06839 104 LFVEKTFQNMAL 115 (496)
T ss_pred EEEcHHHHHHHH
Confidence 998887665543
No 205
>PRK05850 acyl-CoA synthetase; Validated
Probab=43.09 E-value=3.1e+02 Score=29.24 Aligned_cols=84 Identities=12% Similarity=0.026 Sum_probs=57.5
Q ss_pred eeecchHHHHHHHHhHhH---hCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEecc----CChHHHHHHHHhcCcc
Q 008342 213 VVVSHRGAYLMSLNGALI---WGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICLRQ----VTAKAVYTAIATHGVT 285 (569)
Q Consensus 213 v~~t~~~~~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t 285 (569)
..+|+..+.......... .+ .++|++...++-+. --+...++++..|+..+.++. ...+++...+++.++.
T Consensus 34 ~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~-~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~ 111 (578)
T PRK05850 34 ETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGL-EYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPS 111 (578)
T ss_pred eeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcc-cHHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCC
Confidence 467888876665554443 35 57899988888543 223445555666766666643 3567899999999999
Q ss_pred EEeehHHHHHHHH
Q 008342 286 HFCAAPVVLNAIA 298 (569)
Q Consensus 286 ~l~~~P~~~~~l~ 298 (569)
.++..+.....+.
T Consensus 112 ~il~~~~~~~~~~ 124 (578)
T PRK05850 112 VVLTTSAVVDDVT 124 (578)
T ss_pred EEEEcHHHHHHHH
Confidence 9999887766553
No 206
>PLN02246 4-coumarate--CoA ligase
Probab=42.92 E-value=1.6e+02 Score=30.99 Aligned_cols=84 Identities=13% Similarity=0.073 Sum_probs=56.5
Q ss_pred eeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEe
Q 008342 213 VVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFC 288 (569)
Q Consensus 213 v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~ 288 (569)
..+|+..+......... ..++.++|++...++-+. -.....++++..|...+.+ +.....++...+++.++..++
T Consensus 49 ~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li 127 (537)
T PLN02246 49 RVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCP-EFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLII 127 (537)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCh-HHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEE
Confidence 35888888666555444 458899999988876542 2223344444555555555 446778899999999999998
Q ss_pred ehHHHHHHH
Q 008342 289 AAPVVLNAI 297 (569)
Q Consensus 289 ~~P~~~~~l 297 (569)
........+
T Consensus 128 ~~~~~~~~~ 136 (537)
T PLN02246 128 TQSCYVDKL 136 (537)
T ss_pred EccchHHHH
Confidence 876655443
No 207
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=42.92 E-value=2.8e+02 Score=26.96 Aligned_cols=89 Identities=11% Similarity=-0.008 Sum_probs=56.3
Q ss_pred CceeeeeCC--eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHH
Q 008342 35 TRKSVVYGS--KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFI 112 (569)
Q Consensus 35 ~~~a~~~~~--~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 112 (569)
.++.+-.++ -.-|+++- -....+.. +.+.|..+++.|.... .+-.-..+.++|...|..+..+-|..........
T Consensus 16 ~~i~~K~E~~nptGS~K~R-~a~~~l~~-a~~~g~~~~~~vv~aS-sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~ 92 (316)
T cd06448 16 CNVFLKLENLQPSGSFKIR-GIGHLCQK-SAKQGLNECVHVVCSS-GGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEK 92 (316)
T ss_pred CeEEEEeccCCCcCChHHH-HHHHHHHH-HHHhhcccCCeEEEeC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 456666554 33444432 12223333 3333434456665544 3455566678888999988777777666777889
Q ss_pred HhcCCceEEEEccc
Q 008342 113 LSHASSAVVIVDQE 126 (569)
Q Consensus 113 l~~~~~~~vi~~~~ 126 (569)
++.+++++++++..
T Consensus 93 l~~~GA~v~~~~~~ 106 (316)
T cd06448 93 LRDEGATVVVHGKV 106 (316)
T ss_pred HHHcCCEEEEECCc
Confidence 99999999998876
No 208
>PRK13388 acyl-CoA synthetase; Provisional
Probab=42.72 E-value=2.7e+02 Score=29.34 Aligned_cols=83 Identities=8% Similarity=-0.136 Sum_probs=57.6
Q ss_pred eecchHHHHHHHHhHh---HhCC-CCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEe
Q 008342 214 VVSHRGAYLMSLNGAL---IWGM-NEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFC 288 (569)
Q Consensus 214 ~~t~~~~~~~~~~~~~---~~~~-~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~ 288 (569)
.+|+..+......... ..++ .+++++...++-...+ ....++++..|+..+.+ +....+++...+++.+++.++
T Consensus 26 ~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~-v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i 104 (540)
T PRK13388 26 TWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEM-LFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLLV 104 (540)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHH-HHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEEE
Confidence 6788887776655554 3477 6889998888754432 23444555566666655 446778899999999999999
Q ss_pred ehHHHHHHH
Q 008342 289 AAPVVLNAI 297 (569)
Q Consensus 289 ~~P~~~~~l 297 (569)
........+
T Consensus 105 ~~~~~~~~~ 113 (540)
T PRK13388 105 TDAEHRPLL 113 (540)
T ss_pred EChhhhHHH
Confidence 877655443
No 209
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=42.50 E-value=1.5e+02 Score=31.37 Aligned_cols=84 Identities=10% Similarity=-0.025 Sum_probs=58.5
Q ss_pred eecchHHHHHHHHhHh---Hh-CCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEe
Q 008342 214 VVSHRGAYLMSLNGAL---IW-GMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFC 288 (569)
Q Consensus 214 ~~t~~~~~~~~~~~~~---~~-~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~ 288 (569)
.+|+..+...+..... .. ++.+++++...++-+. ..+...++++..|+..+.+ +...+.++...+++.+++.++
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 113 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSP-QFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAI 113 (546)
T ss_pred eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCh-HHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEE
Confidence 4678877655544433 33 8899999998887542 3344555556666666666 446788999999999999999
Q ss_pred ehHHHHHHHH
Q 008342 289 AAPVVLNAIA 298 (569)
Q Consensus 289 ~~P~~~~~l~ 298 (569)
..+.....+.
T Consensus 114 ~~~~~~~~~~ 123 (546)
T PRK08314 114 VGSELAPKVA 123 (546)
T ss_pred EccchhhhHH
Confidence 8877665543
No 210
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=42.48 E-value=2e+02 Score=23.93 Aligned_cols=44 Identities=7% Similarity=-0.041 Sum_probs=37.9
Q ss_pred HHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEccc
Q 008342 83 MYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQE 126 (569)
Q Consensus 83 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 126 (569)
..+..+.+-..|.-++.+..+.+.+++.....+.+|++|..+..
T Consensus 20 ~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~ 63 (137)
T PRK02261 20 NKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSL 63 (137)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCc
Confidence 34555666688999999999999999999999999999998754
No 211
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=42.00 E-value=99 Score=30.93 Aligned_cols=57 Identities=16% Similarity=0.220 Sum_probs=34.9
Q ss_pred hcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeecccc-----CCHHHHHHHHhcCCceEEEEc
Q 008342 64 KLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIR-----LNATVVAFILSHASSAVVIVD 124 (569)
Q Consensus 64 ~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~~ 124 (569)
..++++||.|.+-.+... ....++...|+.++.++.+ .+.+.+...+.. +.++|+..
T Consensus 65 ~~~~~~Gd~Viv~~~t~~---~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~ 126 (375)
T PRK11706 65 LLDIQPGDEVIMPSYTFV---STANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPV 126 (375)
T ss_pred HhCCCCCCEEEECCCCcH---HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEe
Confidence 346778888877555433 3344556678777766532 446777776654 56666643
No 212
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=41.93 E-value=2e+02 Score=30.01 Aligned_cols=94 Identities=16% Similarity=0.018 Sum_probs=65.5
Q ss_pred CCCceeeeeCC---------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchh--HHHHHHHhhhcCceEeecc
Q 008342 33 HPTRKSVVYGS---------KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPA--MYEAQFGAPMAGAVLNSIN 101 (569)
Q Consensus 33 ~p~~~a~~~~~---------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~ 101 (569)
.++.++++... -.+|++.+...+.... ....+++++|++...+|-... +...+++.+..|+.++..+
T Consensus 159 ~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~--~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 236 (508)
T TIGR02262 159 QADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYA--RNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMG 236 (508)
T ss_pred CCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHh--HHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeC
Confidence 35666665431 4578877766554322 233478999998877775443 3345667788898888777
Q ss_pred ccCCHHHHHHHHhcCCceEEEEcccch
Q 008342 102 IRLNATVVAFILSHASSAVVIVDQEFF 128 (569)
Q Consensus 102 ~~~~~~~l~~~l~~~~~~~vi~~~~~~ 128 (569)
...+...+...|++.++.+++..+...
T Consensus 237 ~~~~~~~~~~~i~~~~~t~~~~~P~~~ 263 (508)
T TIGR02262 237 ERPTPDAVFDRLRRHQPTIFYGVPTLY 263 (508)
T ss_pred CCCCHHHHHHHHHHHCCcEEecchHHH
Confidence 667788999999999999999887543
No 213
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=41.62 E-value=1.5e+02 Score=31.53 Aligned_cols=83 Identities=13% Similarity=0.042 Sum_probs=57.8
Q ss_pred eecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEee
Q 008342 214 VVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFCA 289 (569)
Q Consensus 214 ~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~ 289 (569)
.+|+..+...+..... ..+++++|++....+-.... +...+++...|+..+.+ +....+++...+++.++..++.
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 135 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQH-IVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIV 135 (573)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEe
Confidence 4688887666555444 45788999999888764332 23344445555555555 4578899999999999999998
Q ss_pred hHHHHHHH
Q 008342 290 APVVLNAI 297 (569)
Q Consensus 290 ~P~~~~~l 297 (569)
.......+
T Consensus 136 ~~~~~~~~ 143 (573)
T PRK05605 136 WDKVAPTV 143 (573)
T ss_pred chhhHHHH
Confidence 77765544
No 214
>PRK13383 acyl-CoA synthetase; Provisional
Probab=41.15 E-value=1.8e+02 Score=30.45 Aligned_cols=84 Identities=14% Similarity=0.047 Sum_probs=57.7
Q ss_pred eecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEee
Q 008342 214 VVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFCA 289 (569)
Q Consensus 214 ~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~ 289 (569)
.+|...+......... ..++.+++++...++-.- ......+++...|...+.+ +....+++...+++.+++.++.
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~-~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~ 138 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGR-GFVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVA 138 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH-HHHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEE
Confidence 4677777666555444 347889999988887533 2233344555556655555 4567899999999999999999
Q ss_pred hHHHHHHHH
Q 008342 290 APVVLNAIA 298 (569)
Q Consensus 290 ~P~~~~~l~ 298 (569)
.+...+.+.
T Consensus 139 ~~~~~~~~~ 147 (516)
T PRK13383 139 DNEFAERIA 147 (516)
T ss_pred chhHHHHHH
Confidence 887666543
No 215
>PLN02550 threonine dehydratase
Probab=40.99 E-value=4.5e+02 Score=28.20 Aligned_cols=99 Identities=9% Similarity=0.002 Sum_probs=60.0
Q ss_pred hhhCCCceeeeeCCeee--eHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHH
Q 008342 30 ATLHPTRKSVVYGSKHY--TWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNAT 107 (569)
Q Consensus 30 a~~~p~~~a~~~~~~~~--Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~ 107 (569)
.+....++.+-.++.+- ||+. +-..+++.+ |.+....+| .|. ...+-....+.++|.+.|+.+..+-|...+.
T Consensus 119 S~~~g~~IylK~E~lqptGSFK~-RGA~n~I~~-L~~e~~~~G-VV~--aSaGNhAqgvA~aA~~lGika~IvmP~~tp~ 193 (591)
T PLN02550 119 SERLGVKVLLKREDLQPVFSFKL-RGAYNMMAK-LPKEQLDKG-VIC--SSAGNHAQGVALSAQRLGCDAVIAMPVTTPE 193 (591)
T ss_pred hHhhCCEEEEEEcCCCCCCcHHH-HHHHHHHHH-HHHhcCCCC-EEE--ECCCHHHHHHHHHHHHcCCCEEEEECCCCCH
Confidence 33444567776666443 4544 333344433 323234556 444 3444556667778899998776666665555
Q ss_pred HHHHHHhcCCceEEEEcccchHHHHH
Q 008342 108 VVAFILSHASSAVVIVDQEFFSLAEE 133 (569)
Q Consensus 108 ~l~~~l~~~~~~~vi~~~~~~~~~~~ 133 (569)
.-...++.++++++++...+.+....
T Consensus 194 ~Kv~~~r~~GAeVvl~g~~~dea~~~ 219 (591)
T PLN02550 194 IKWQSVERLGATVVLVGDSYDEAQAY 219 (591)
T ss_pred HHHHHHHHcCCEEEEeCCCHHHHHHH
Confidence 55777899999999998765544333
No 216
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=40.81 E-value=1.8e+02 Score=30.76 Aligned_cols=83 Identities=12% Similarity=0.029 Sum_probs=57.0
Q ss_pred eeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEe
Q 008342 213 VVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFC 288 (569)
Q Consensus 213 v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~ 288 (569)
..+|+..+...+..... ..++.+++++...++-...+ ....++++..|+..+.+ +.....++...+++.++..++
T Consensus 54 ~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i 132 (546)
T PLN02330 54 KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEY-GIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIV 132 (546)
T ss_pred CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH-HHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEE
Confidence 45788887666655444 45788999998887765433 23445555666665555 345678899999999999998
Q ss_pred ehHHHHHH
Q 008342 289 AAPVVLNA 296 (569)
Q Consensus 289 ~~P~~~~~ 296 (569)
..+..+..
T Consensus 133 ~~~~~~~~ 140 (546)
T PLN02330 133 TNDTNYGK 140 (546)
T ss_pred Eccchhhh
Confidence 77655543
No 217
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=40.30 E-value=1.7e+02 Score=25.97 Aligned_cols=97 Identities=9% Similarity=0.042 Sum_probs=52.7
Q ss_pred cCCccccccccccccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHH
Q 008342 6 DIDDLPKISANYTALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYE 85 (569)
Q Consensus 6 ~~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~ 85 (569)
++|++.+....... ..+.+....+.-..-+.+.+-..+..+......++...+. ++.++++..+-=.+++
T Consensus 4 YlHGF~Ssp~S~Ka----~~l~~~~~~~~~~~~~~~p~l~~~p~~a~~~l~~~i~~~~------~~~~~liGSSlGG~~A 73 (187)
T PF05728_consen 4 YLHGFNSSPQSFKA----QALKQYFAEHGPDIQYPCPDLPPFPEEAIAQLEQLIEELK------PENVVLIGSSLGGFYA 73 (187)
T ss_pred EecCCCCCCCCHHH----HHHHHHHHHhCCCceEECCCCCcCHHHHHHHHHHHHHhCC------CCCeEEEEEChHHHHH
Confidence 34566555444444 3444444444333445556656666666554444333321 2236665554445555
Q ss_pred HHHHhhhcCceEeeccccCCHHH-HHHHH
Q 008342 86 AQFGAPMAGAVLNSINIRLNATV-VAFIL 113 (569)
Q Consensus 86 ~~lA~~~~G~~~v~l~~~~~~~~-l~~~l 113 (569)
.++| -+.|+..+.+||...+.. +...+
T Consensus 74 ~~La-~~~~~~avLiNPav~p~~~l~~~i 101 (187)
T PF05728_consen 74 TYLA-ERYGLPAVLINPAVRPYELLQDYI 101 (187)
T ss_pred HHHH-HHhCCCEEEEcCCCCHHHHHHHhh
Confidence 5555 566899999999988644 44444
No 218
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=39.90 E-value=1.6e+02 Score=28.58 Aligned_cols=76 Identities=14% Similarity=0.187 Sum_probs=57.9
Q ss_pred HHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHHh
Q 008342 61 ALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMME 139 (569)
Q Consensus 61 ~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~ 139 (569)
-|.+.|+.+|.+|+|..--....+...+|.+. |..++.++... ..-...++..+++..+...+.......+.+.+.
T Consensus 173 pLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAM-G~rV~vis~~~--~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~d 248 (360)
T KOG0023|consen 173 PLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAM-GMRVTVISTSS--KKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTD 248 (360)
T ss_pred hhHHcCCCCCcEEEEecCcccchHHHHHHHHh-CcEEEEEeCCc--hhHHHHHHhcCcceeEEecCCHHHHHHHHHhhc
Confidence 46778999999999999999999999998765 55556666542 234667888999999988776666766665544
No 219
>PLN03013 cysteine synthase
Probab=39.86 E-value=3.4e+02 Score=27.76 Aligned_cols=65 Identities=17% Similarity=0.057 Sum_probs=46.3
Q ss_pred HHhcC-CCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEccc
Q 008342 62 LSKLS-IGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQE 126 (569)
Q Consensus 62 L~~~g-~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 126 (569)
+.+.| +++|....+.....-.-+...++|...|..+..+-|...++.....++.+++++++++..
T Consensus 165 a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 165 AEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred HHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 44455 477855445555555566666777788987777766666777788999999999999765
No 220
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=39.70 E-value=79 Score=26.32 Aligned_cols=41 Identities=15% Similarity=0.169 Sum_probs=32.8
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCC---chhHHHHHHHhhhcCce
Q 008342 56 RRFASALSKLSIGLGTTVSVIAPN---VPAMYEAQFGAPMAGAV 96 (569)
Q Consensus 56 ~~la~~L~~~g~~~g~~V~i~~~~---~~~~~~~~lA~~~~G~~ 96 (569)
..++..|.+.|+.+++.|.+++.. ......+++.+-.+|..
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~ 124 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHP 124 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCC
Confidence 478888999999999999999875 55666677777788864
No 221
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=39.59 E-value=3.8e+02 Score=26.84 Aligned_cols=56 Identities=11% Similarity=0.075 Sum_probs=45.3
Q ss_pred EEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccchH
Q 008342 72 TVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFS 129 (569)
Q Consensus 72 ~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 129 (569)
.|+-...| ....+.|++.++|+.+..+=|...+..--+.++..++.+++.-++..+
T Consensus 117 ViasSaGN--ha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~~~de 172 (457)
T KOG1250|consen 117 VIASSAGN--HAQAAAYAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGEDWDE 172 (457)
T ss_pred eEEecCcc--HHHHHHHHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEecccHHH
Confidence 55555554 556788999999999999989989988899999999999887766544
No 222
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=39.53 E-value=2.1e+02 Score=31.65 Aligned_cols=92 Identities=10% Similarity=0.093 Sum_probs=62.6
Q ss_pred CCCceeeeeC--C-------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCc--hhHHHHHHHhhhcCceEeecc
Q 008342 33 HPTRKSVVYG--S-------KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNV--PAMYEAQFGAPMAGAVLNSIN 101 (569)
Q Consensus 33 ~p~~~a~~~~--~-------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~ 101 (569)
.++.+|++.. + -.+|++.+...+..+... .++.++|++...+|-. ..+...+++.+..|+..+..+
T Consensus 363 ~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~---~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~ 439 (718)
T PRK08043 363 QPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTI---ADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYP 439 (718)
T ss_pred CCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHh---hCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeC
Confidence 4466666543 1 458888887766655543 4788899998887753 334456778888999887665
Q ss_pred ccCCHHHHHHHHhcCCceEEEEcccc
Q 008342 102 IRLNATVVAFILSHASSAVVIVDQEF 127 (569)
Q Consensus 102 ~~~~~~~l~~~l~~~~~~~vi~~~~~ 127 (569)
.......+...+++.++.+++..+..
T Consensus 440 ~~~~~~~~~~~i~~~~vt~~~~~p~~ 465 (718)
T PRK08043 440 SPLHYRIVPELVYDRNCTVLFGTSTF 465 (718)
T ss_pred CcccHHHHHHHHHhcCCeEEEchHHH
Confidence 44455667778888888887765543
No 223
>PRK06188 acyl-CoA synthetase; Validated
Probab=39.00 E-value=1.7e+02 Score=30.68 Aligned_cols=82 Identities=6% Similarity=-0.037 Sum_probs=60.2
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEE
Q 008342 44 KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIV 123 (569)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 123 (569)
-.+|+..+...+.... ...++..++++...+|-+..+...+++.+..|+..+..+ ...+..+...++..++.+++.
T Consensus 186 v~~s~~~l~~~~~~~~---~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 261 (524)
T PRK06188 186 VMGTHRSIATMAQIQL---AEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLA-KFDPAEVLRAIEEQRITATFL 261 (524)
T ss_pred eeeehHHHHHHHHHHH---hhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcC-CCCHHHHHHHHHHhCCEEEEe
Confidence 3477877776554433 345778899998888876555555677788898877665 467888999999999999988
Q ss_pred cccchH
Q 008342 124 DQEFFS 129 (569)
Q Consensus 124 ~~~~~~ 129 (569)
.+....
T Consensus 262 ~P~~l~ 267 (524)
T PRK06188 262 VPTMIY 267 (524)
T ss_pred hHHHHH
Confidence 766543
No 224
>PRK07514 malonyl-CoA synthase; Validated
Probab=38.80 E-value=2e+02 Score=29.81 Aligned_cols=84 Identities=10% Similarity=-0.048 Sum_probs=57.7
Q ss_pred eeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEe
Q 008342 213 VVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFC 288 (569)
Q Consensus 213 v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~ 288 (569)
..+|...+......... ..++.++|++....+-.. -.....+++...|+..+.+ +.....++...+++.+++.++
T Consensus 27 ~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~-e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii 105 (504)
T PRK07514 27 LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSP-EALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALVV 105 (504)
T ss_pred CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEEE
Confidence 46788877655544443 458899999988887652 2233444555566666555 446788899999999999998
Q ss_pred ehHHHHHHH
Q 008342 289 AAPVVLNAI 297 (569)
Q Consensus 289 ~~P~~~~~l 297 (569)
..+.....+
T Consensus 106 ~~~~~~~~~ 114 (504)
T PRK07514 106 CDPANFAWL 114 (504)
T ss_pred EccchhHHH
Confidence 887766544
No 225
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=38.47 E-value=2.5e+02 Score=29.97 Aligned_cols=86 Identities=17% Similarity=0.195 Sum_probs=60.0
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhH-HHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEE
Q 008342 44 KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAM-YEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVI 122 (569)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 122 (569)
-.+|++.+...+..+.. ....++.+++++...+|-...+ +...++++..|...+...+..+++.+...+++.++.+++
T Consensus 199 v~~s~~~l~~~~~~~~~-~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~ 277 (576)
T PRK05620 199 VVYSHRSLYLQSLSLRT-TDSLAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAH 277 (576)
T ss_pred EEEEcHHHHHHHHHhhh-hhhcCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceee
Confidence 35788777554433221 2235778899998887765432 344577778888877766677899999999999999998
Q ss_pred EcccchHH
Q 008342 123 VDQEFFSL 130 (569)
Q Consensus 123 ~~~~~~~~ 130 (569)
..+.....
T Consensus 278 ~~P~~~~~ 285 (576)
T PRK05620 278 GVPTLWIQ 285 (576)
T ss_pred ecCHHHHH
Confidence 87765443
No 226
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=38.46 E-value=3.7e+02 Score=25.88 Aligned_cols=60 Identities=13% Similarity=0.024 Sum_probs=42.2
Q ss_pred cC-CCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcc
Q 008342 65 LS-IGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQ 125 (569)
Q Consensus 65 ~g-~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 125 (569)
.| +++|+.|.= ....-.-+...+.|...|..++.+=|..-..+-..+|+.+++.+++++.
T Consensus 56 ~G~l~pG~tIVE-~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 56 RGLLKPGGTIVE-ATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred cCCCCCCCEEEE-cCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 45 788985433 2223334556667777788777776665566668999999999999987
No 227
>PRK08162 acyl-CoA synthetase; Validated
Probab=37.57 E-value=1.6e+02 Score=30.98 Aligned_cols=83 Identities=10% Similarity=0.034 Sum_probs=58.7
Q ss_pred eecchHHHHHHHHhHhH---hCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEee
Q 008342 214 VVSHRGAYLMSLNGALI---WGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFCA 289 (569)
Q Consensus 214 ~~t~~~~~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~ 289 (569)
.+|...+.......... .++.++|++...++-...+ +...++++..|+..+.+ +.....++...+++.+++.++.
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~ 121 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAM-VEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIV 121 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH-HHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEE
Confidence 47888877666555543 4789999998888764322 23344555556655555 4567889999999999999998
Q ss_pred hHHHHHHH
Q 008342 290 APVVLNAI 297 (569)
Q Consensus 290 ~P~~~~~l 297 (569)
.+.....+
T Consensus 122 ~~~~~~~~ 129 (545)
T PRK08162 122 DTEFAEVA 129 (545)
T ss_pred ccchhhHH
Confidence 88766544
No 228
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=37.25 E-value=2.7e+02 Score=27.39 Aligned_cols=60 Identities=18% Similarity=0.168 Sum_probs=43.6
Q ss_pred HHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcc
Q 008342 62 LSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQ 125 (569)
Q Consensus 62 L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 125 (569)
|++.+++||++|+|+.--........+|-..- +.++.++.+... ....++.+++.++...
T Consensus 159 lk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~g-a~Via~~~~~~K---~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 159 LKKANVKPGKWVAVVGAGGLGHMAVQYAKAMG-AEVIAITRSEEK---LELAKKLGADHVINSS 218 (339)
T ss_pred hhhcCCCCCCEEEEECCcHHHHHHHHHHHHcC-CeEEEEeCChHH---HHHHHHhCCcEEEEcC
Confidence 55678999999999999999999888887544 777777655332 3445566777777654
No 229
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=37.01 E-value=3.8e+02 Score=25.72 Aligned_cols=89 Identities=11% Similarity=-0.035 Sum_probs=54.6
Q ss_pred CceeeeeCC--eeeeHHHHHHHHHHHHHHHHhcCC-CCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHH
Q 008342 35 TRKSVVYGS--KHYTWHQTYRRCRRFASALSKLSI-GLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAF 111 (569)
Q Consensus 35 ~~~a~~~~~--~~~Ty~el~~~~~~la~~L~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 111 (569)
.++.+-.++ .+-||+. +.....+. .+.+.|. .+|+.|. ....+-.-..+.++|...|..+..+-|...+..-..
T Consensus 22 ~~i~~K~E~~~ptGS~K~-R~a~~~~~-~a~~~g~~~~g~~vv-~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~ 98 (299)
T TIGR01136 22 ARVLAKLEGRNPSGSVKD-RIALSMIE-DAEKRGLLKPGDTII-EATSGNTGIALAMVAAAKGYKLILTMPETMSLERRK 98 (299)
T ss_pred ceEEEEEcccCCCCCccH-HHHHHHHH-HHHHcCCCCCCCEEE-EeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHH
Confidence 356666555 3334443 22233333 3444453 6777664 344445555666677788987776666555556667
Q ss_pred HHhcCCceEEEEccc
Q 008342 112 ILSHASSAVVIVDQE 126 (569)
Q Consensus 112 ~l~~~~~~~vi~~~~ 126 (569)
.++..++++++++.+
T Consensus 99 ~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 99 LLRAYGAELILTPAE 113 (299)
T ss_pred HHHHcCCEEEEeCCC
Confidence 899999999999865
No 230
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=36.92 E-value=3.1e+02 Score=25.70 Aligned_cols=78 Identities=15% Similarity=0.102 Sum_probs=47.0
Q ss_pred HHHHHH-HHHHHHHHHHhcC-CCCCCEEEEEcCCchhHHHHHHHhhhc------C--ceEeeccccC---CHHHHHHHHh
Q 008342 48 WHQTYR-RCRRFASALSKLS-IGLGTTVSVIAPNVPAMYEAQFGAPMA------G--AVLNSINIRL---NATVVAFILS 114 (569)
Q Consensus 48 y~el~~-~~~~la~~L~~~g-~~~g~~V~i~~~~~~~~~~~~lA~~~~------G--~~~v~l~~~~---~~~~l~~~l~ 114 (569)
+..+.. ..+++.+.+.+.+ +.+|++|++...-+.+.++++..+... | ..++.++... ..+.+..+.+
T Consensus 5 ~~~~~~~~~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~~ 84 (258)
T PRK10696 5 FNKLQKRLRRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYLE 84 (258)
T ss_pred hhHHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHHH
Confidence 333443 3344555666654 578999999999999998777666332 2 3444555432 3344455566
Q ss_pred cCCceEEEEcc
Q 008342 115 HASSAVVIVDQ 125 (569)
Q Consensus 115 ~~~~~~vi~~~ 125 (569)
..+..+.+.+.
T Consensus 85 ~lgI~~~v~~~ 95 (258)
T PRK10696 85 SLGVPYHIEEQ 95 (258)
T ss_pred HhCCCEEEEEe
Confidence 66666665543
No 231
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=36.90 E-value=2.2e+02 Score=30.52 Aligned_cols=83 Identities=14% Similarity=0.063 Sum_probs=57.4
Q ss_pred eecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEee
Q 008342 214 VVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFCA 289 (569)
Q Consensus 214 ~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~ 289 (569)
.+|+..+......... ..++.+++++...++-...+ +...+++...|+..+.+ +....+++...+++.+++.++.
T Consensus 62 ~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~-v~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~ 140 (600)
T PRK08279 62 SISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEY-LAAWLGLAKLGAVVALLNTQQRGAVLAHSLNLVDAKHLIV 140 (600)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEeecCCCCCHHHHHHHHHhcCCCEEEE
Confidence 4688887666555444 45788999999887654332 34455555566666555 3467788999999999999998
Q ss_pred hHHHHHHH
Q 008342 290 APVVLNAI 297 (569)
Q Consensus 290 ~P~~~~~l 297 (569)
.......+
T Consensus 141 ~~~~~~~~ 148 (600)
T PRK08279 141 GEELVEAF 148 (600)
T ss_pred ChHHHHHH
Confidence 77665544
No 232
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=36.77 E-value=3.1e+02 Score=29.02 Aligned_cols=78 Identities=12% Similarity=0.026 Sum_probs=54.9
Q ss_pred eecchHHHHHHHHhHhHh---CCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEec-cCChHHHHHHHHhcCccEEee
Q 008342 214 VVSHRGAYLMSLNGALIW---GMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICLR-QVTAKAVYTAIATHGVTHFCA 289 (569)
Q Consensus 214 ~~t~~~~~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 289 (569)
.+|++.+...+......+ ++.++|++...++-+.-+ +...+.++..|...+.++ ...+.++...++..++..++.
T Consensus 38 ~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~-~~~~~a~~~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~ 116 (534)
T COG0318 38 RLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEF-LIAFLAALRAGAVAVPLNPRLTPRELAYILNDAGAKVLIT 116 (534)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCEEEeecCcccCHHHHHHHHHhcCCeEEEE
Confidence 789998877776655543 577899998888765333 333444455566565554 357888889999999999988
Q ss_pred hHH
Q 008342 290 APV 292 (569)
Q Consensus 290 ~P~ 292 (569)
...
T Consensus 117 ~~~ 119 (534)
T COG0318 117 SAE 119 (534)
T ss_pred ccc
Confidence 765
No 233
>PLN00011 cysteine synthase
Probab=36.56 E-value=2.4e+02 Score=27.51 Aligned_cols=90 Identities=13% Similarity=-0.027 Sum_probs=55.2
Q ss_pred ceeeeeCCeeeeHHHHHHHHHHHHHHHHhcC-CCCC-CEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHH
Q 008342 36 RKSVVYGSKHYTWHQTYRRCRRFASALSKLS-IGLG-TTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFIL 113 (569)
Q Consensus 36 ~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g-~~~g-~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 113 (569)
++++-.++.+=|-.-=.+.+..+.....+.| +.+| +.|.. ...+-.-..+.++|...|..+..+-|...+.....++
T Consensus 33 ~i~~K~E~~nPtGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~-aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i 111 (323)
T PLN00011 33 RIAAKLEMMEPCSSVKDRIAYSMIKDAEDKGLITPGKSTLIE-ATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIIL 111 (323)
T ss_pred eEEEEecccCCccccchHHHHHHHHHHHHcCCCCCCCcEEEE-eCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHH
Confidence 5666555533222111122333333344444 6777 55544 5555566667778888998777766655556778899
Q ss_pred hcCCceEEEEccc
Q 008342 114 SHASSAVVIVDQE 126 (569)
Q Consensus 114 ~~~~~~~vi~~~~ 126 (569)
+..++++++++..
T Consensus 112 ~~~GA~V~~~~~~ 124 (323)
T PLN00011 112 RALGAEVHLTDQS 124 (323)
T ss_pred HHcCCEEEEECCC
Confidence 9999999998864
No 234
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=36.33 E-value=1.9e+02 Score=30.69 Aligned_cols=82 Identities=11% Similarity=0.020 Sum_probs=57.2
Q ss_pred eecchHHHHHHHHhHh----HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEe
Q 008342 214 VVSHRGAYLMSLNGAL----IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFC 288 (569)
Q Consensus 214 ~~t~~~~~~~~~~~~~----~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~ 288 (569)
.+|+..+......... ..++++++++...++-...+ ....+++...|+..+.+ +.+...++...+++.+++.++
T Consensus 50 ~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi 128 (560)
T PRK08751 50 TITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQY-PIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLV 128 (560)
T ss_pred eeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH-HHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEE
Confidence 4788887666555443 35889999999888765332 23445555566666655 456788999999999999999
Q ss_pred ehHHHHHH
Q 008342 289 AAPVVLNA 296 (569)
Q Consensus 289 ~~P~~~~~ 296 (569)
........
T Consensus 129 ~~~~~~~~ 136 (560)
T PRK08751 129 VIDNFGTT 136 (560)
T ss_pred EcchhHHH
Confidence 87665543
No 235
>PRK09088 acyl-CoA synthetase; Validated
Probab=35.52 E-value=3.5e+02 Score=27.95 Aligned_cols=77 Identities=8% Similarity=-0.099 Sum_probs=53.4
Q ss_pred eecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEee
Q 008342 214 VVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFCA 289 (569)
Q Consensus 214 ~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~ 289 (569)
.+|+..+......... ..++.+++++...++-...+ +...+++...|+..+.+ +...++++...+++.+++.++.
T Consensus 22 ~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~-~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~ 100 (488)
T PRK09088 22 RWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWL-VALHFACARVGAIYVPLNWRLSASELDALLQDAEPRLLLG 100 (488)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEEEE
Confidence 5788887666655444 44788999998887765432 23344555556666555 4567788999999999999987
Q ss_pred hH
Q 008342 290 AP 291 (569)
Q Consensus 290 ~P 291 (569)
..
T Consensus 101 ~~ 102 (488)
T PRK09088 101 DD 102 (488)
T ss_pred cc
Confidence 55
No 236
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=35.23 E-value=3.3e+02 Score=24.31 Aligned_cols=99 Identities=3% Similarity=-0.072 Sum_probs=61.2
Q ss_pred eCCeeeeHHHHHHHHHHHHHHHH---h-cC----CCCCCEEEEEcCCc-h---hHHHHHHHhhhcCceEeeccccCCHHH
Q 008342 41 YGSKHYTWHQTYRRCRRFASALS---K-LS----IGLGTTVSVIAPNV-P---AMYEAQFGAPMAGAVLNSINIRLNATV 108 (569)
Q Consensus 41 ~~~~~~Ty~el~~~~~~la~~L~---~-~g----~~~g~~V~i~~~~~-~---~~~~~~lA~~~~G~~~v~l~~~~~~~~ 108 (569)
+.+..+|-.|..-.++.+-..+. . .. -+...+|.+.+..+ . ...+....+-..|.-++.+.++.|.++
T Consensus 47 w~~gei~va~~~~a~~~~~~~l~~l~~~~~~~~~~~~~~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~ 126 (197)
T TIGR02370 47 FEDGELFLPHVMMSADAMLAGIKVLTPEMEKAVETEVLGKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDT 126 (197)
T ss_pred HcCCCccHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHH
Confidence 34467887766555544433322 1 11 12223555555443 2 334444555667999999999999999
Q ss_pred HHHHHhcCCceEEEEcccc---hHHHHHHHHHHh
Q 008342 109 VAFILSHASSAVVIVDQEF---FSLAEEALKMME 139 (569)
Q Consensus 109 l~~~l~~~~~~~vi~~~~~---~~~~~~~~~~~~ 139 (569)
+...+++.+|++|..+-.. ...+.+..+.+.
T Consensus 127 ~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~ 160 (197)
T TIGR02370 127 VVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLK 160 (197)
T ss_pred HHHHHHHcCCCEEEEccccccCHHHHHHHHHHHH
Confidence 9999999999999987543 333344444443
No 237
>PRK07787 acyl-CoA synthetase; Validated
Probab=34.95 E-value=3.5e+02 Score=27.81 Aligned_cols=82 Identities=12% Similarity=0.017 Sum_probs=59.1
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCc--hhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEE
Q 008342 44 KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNV--PAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVV 121 (569)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 121 (569)
-.+|+..+...+..++.. .++.++|++...+|-. ..++..+++++..|+.++... ..+...+...++ .++..+
T Consensus 146 v~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~-~~~t~~ 220 (471)
T PRK07787 146 VVLSRRAIAADLDALAEA---WQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTG-RPTPEAYAQALS-EGGTLY 220 (471)
T ss_pred EEEeHHHHHHHHHHHHHh---cCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecC-CCCHHHHHHHHh-hCceEE
Confidence 357888887776655544 4678888887666542 344566788999999888664 457888999999 899888
Q ss_pred EEcccchHH
Q 008342 122 IVDQEFFSL 130 (569)
Q Consensus 122 i~~~~~~~~ 130 (569)
...+.....
T Consensus 221 ~~~P~~~~~ 229 (471)
T PRK07787 221 FGVPTVWSR 229 (471)
T ss_pred EcchHHHHH
Confidence 877665433
No 238
>PRK07476 eutB threonine dehydratase; Provisional
Probab=34.66 E-value=2.8e+02 Score=27.00 Aligned_cols=57 Identities=14% Similarity=-0.013 Sum_probs=40.2
Q ss_pred CCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHH
Q 008342 78 PNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEA 134 (569)
Q Consensus 78 ~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 134 (569)
..+-.-..+.++|.+.|..+..+-|...+..-...++.++++++++..........+
T Consensus 74 SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~a 130 (322)
T PRK07476 74 STGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRSQDDAQAEV 130 (322)
T ss_pred CCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCCHHHHHHHH
Confidence 444455666778888998776666665556667888999999999987654443333
No 239
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=34.51 E-value=19 Score=17.27 Aligned_cols=9 Identities=44% Similarity=0.789 Sum_probs=6.9
Q ss_pred ccccccCCC
Q 008342 340 TYGLTELTG 348 (569)
Q Consensus 340 ~YG~tE~~~ 348 (569)
.||+|++.+
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 489998864
No 240
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=34.16 E-value=3.4e+02 Score=24.22 Aligned_cols=89 Identities=19% Similarity=0.231 Sum_probs=52.0
Q ss_pred cEEEEcCCc-cchhhHHHHHHHHHhcceEEE-e-ccCChHHHHHHHHhcCccEEeehHH---H---HHHHHccCCCCCCC
Q 008342 237 AVFLWTLPM-FHGNGWSYTWSLAALCGTSIC-L-RQVTAKAVYTAIATHGVTHFCAAPV---V---LNAIANASPEDTIL 307 (569)
Q Consensus 237 d~~~~~~p~-~~~~g~~~~~~~~~~g~~~~~-~-~~~~~~~~~~~i~~~~~t~l~~~P~---~---~~~l~~~~~~~~~~ 307 (569)
.+++.+.+- .|..|....-..+-..|--++ + ....++++.+.+.+++++++..+-+ . +..+.+.......
T Consensus 84 ~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~- 162 (201)
T cd02070 84 KVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGL- 162 (201)
T ss_pred eEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCC-
Confidence 344444543 688887666666655555544 3 3467799999999999998765432 1 2222222211110
Q ss_pred CcccceeeeecCCCCCHHHHH
Q 008342 308 PLTNVVNVNTAGAPPPPSLLF 328 (569)
Q Consensus 308 ~l~~l~~~~~~g~~l~~~~~~ 328 (569)
... -.+++||.+++++..+
T Consensus 163 -~~~-~~i~vGG~~~~~~~~~ 181 (201)
T cd02070 163 -RDK-VKVMVGGAPVNQEFAD 181 (201)
T ss_pred -CcC-CeEEEECCcCCHHHHH
Confidence 112 2378899898876443
No 241
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=34.11 E-value=2.9e+02 Score=29.14 Aligned_cols=84 Identities=17% Similarity=0.086 Sum_probs=60.6
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhH---HHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceE
Q 008342 44 KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAM---YEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAV 120 (569)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~---~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 120 (569)
-.+|.+.+...+...... .++.++|++...+|-...+ ....++++..|+..+.. +.........++++.++.+
T Consensus 200 V~~s~~~l~~~~~~~~~~---~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~~~~l~~~~~t~ 275 (536)
T PRK10946 200 IPRTHNDYYYSVRRSVEI---CGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLA-PDPSATLCFPLIEKHQVNV 275 (536)
T ss_pred EEEehHHHHHHHHHHHHh---cCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEEC-CCCCHHHHHHHHHHhCCcE
Confidence 458888888877665443 4688899998887764332 22467888899987754 4456777888999999999
Q ss_pred EEEcccchHHH
Q 008342 121 VIVDQEFFSLA 131 (569)
Q Consensus 121 vi~~~~~~~~~ 131 (569)
+...+.....+
T Consensus 276 ~~~~p~~~~~l 286 (536)
T PRK10946 276 TALVPPAVSLW 286 (536)
T ss_pred EEeChHHHHHH
Confidence 98877655444
No 242
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=33.96 E-value=1.8e+02 Score=29.59 Aligned_cols=81 Identities=15% Similarity=0.178 Sum_probs=48.2
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHhhhcCceEeecccc---------CCH-----HHHHHHHhcCC-ce----EEEEcccc
Q 008342 67 IGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIR---------LNA-----TVVAFILSHAS-SA----VVIVDQEF 127 (569)
Q Consensus 67 ~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~---------~~~-----~~l~~~l~~~~-~~----~vi~~~~~ 127 (569)
+++||.|++ -.|+-..+.. |+...|+.++.+.|. .+. +.+...|+... ++ ++|+++.+
T Consensus 103 ~~~gd~VLv-~RN~HkSv~~--alil~ga~Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY 179 (417)
T PF01276_consen 103 CRPGDKVLV-DRNCHKSVYN--ALILSGAIPVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY 179 (417)
T ss_dssp TTTTCEEEE-ETT--HHHHH--HHHHHTEEEEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T
T ss_pred cCCCCEEEE-cCCcHHHHHH--HHHHcCCeEEEecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC
Confidence 478998755 4555554444 999999999999884 223 78888887653 23 56677765
Q ss_pred hH---HHHHHHHHHhhhcCCCCCcCeEEEecCC
Q 008342 128 FS---LAEEALKMMEANSEGKLKTPHLIVIGDE 157 (569)
Q Consensus 128 ~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 157 (569)
.. .+....+.+. +....+.+++.
T Consensus 180 ~Gv~~di~~I~~~~h-------~~~~~llvDEA 205 (417)
T PF01276_consen 180 YGVCYDIKEIAEICH-------KHGIPLLVDEA 205 (417)
T ss_dssp TSEEE-HHHHHHHHC-------CTECEEEEE-T
T ss_pred CeEEECHHHHHHHhc-------ccCCEEEEEcc
Confidence 43 4444444444 33445556654
No 243
>COG1171 IlvA Threonine dehydratase [Amino acid transport and metabolism]
Probab=33.90 E-value=4.5e+02 Score=25.91 Aligned_cols=114 Identities=11% Similarity=0.030 Sum_probs=72.9
Q ss_pred CHHHHHHHhhhhCCCceeeeeCCe--eeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEe
Q 008342 21 TPLWFINRAATLHPTRKSVVYGSK--HYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLN 98 (569)
Q Consensus 21 ~l~~~l~~~a~~~p~~~a~~~~~~--~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (569)
|.........++...++.+-.++- .=+| .++-.-+++.+ |...+-++.-.|+-...|+-+ -..|||-+.|...+
T Consensus 26 TPL~~s~~Ls~~~g~~v~lK~E~lQ~~gSF-K~RGA~n~i~~-Ls~e~~~~~gViaaSaGNHaQ--GvA~aa~~lGi~a~ 101 (347)
T COG1171 26 TPLQRSPSLSERLGAEIYLKRENLQPVGSF-KIRGAYNKLSS-LSEEEERAAGVIAASAGNHAQ--GVAYAAKRLGIKAT 101 (347)
T ss_pred CCcccchhhHHhhCceEEEeeccCcccccc-hhhhHHHHHHh-cChhhhhcCceEEecCCcHHH--HHHHHHHHhCCCEE
Confidence 333444444556777888877772 2333 33334444444 442211222266666666555 45689999999777
Q ss_pred eccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHHHH
Q 008342 99 SINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALKMM 138 (569)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~ 138 (569)
.+=|..++..-...++.+++.++++...+.+....+.+..
T Consensus 102 IvMP~~tp~~Kv~a~r~~GaeVil~g~~~dda~~~a~~~a 141 (347)
T COG1171 102 IVMPETTPKIKVDATRGYGAEVILHGDNFDDAYAAAEELA 141 (347)
T ss_pred EEecCCCcHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHH
Confidence 7777777777788899999999999988766655554433
No 244
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=33.84 E-value=4.5e+02 Score=25.51 Aligned_cols=98 Identities=15% Similarity=0.136 Sum_probs=61.7
Q ss_pred CCceeeeeCC----eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHH
Q 008342 34 PTRKSVVYGS----KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVV 109 (569)
Q Consensus 34 p~~~a~~~~~----~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l 109 (569)
..++++..++ ..|+-.+..+.+.++.....+.| ++....-++.++.-+...|.-...+...+.+-...+..-+
T Consensus 146 ~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~---~~~~vttSRRTp~~~~~~L~~~~~~~~~~~~~~~~~~nPy 222 (311)
T PF06258_consen 146 RPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG---GSLLVTTSRRTPPEAEAALRELLKDNPGVYIWDGTGENPY 222 (311)
T ss_pred CCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC---CeEEEEcCCCCcHHHHHHHHHhhcCCCceEEecCCCCCcH
Confidence 4567766654 44555666777777777777754 4566666777777666666555533222211144445556
Q ss_pred HHHHhcCCceEEEEcccchHHHHHHHH
Q 008342 110 AFILSHASSAVVIVDQEFFSLAEEALK 136 (569)
Q Consensus 110 ~~~l~~~~~~~vi~~~~~~~~~~~~~~ 136 (569)
..+|.. ++.+++..+..+++.+++.
T Consensus 223 ~~~La~--ad~i~VT~DSvSMvsEA~~ 247 (311)
T PF06258_consen 223 LGFLAA--ADAIVVTEDSVSMVSEAAA 247 (311)
T ss_pred HHHHHh--CCEEEEcCccHHHHHHHHH
Confidence 666664 6678888888888888764
No 245
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=33.78 E-value=3.4e+02 Score=28.64 Aligned_cols=83 Identities=10% Similarity=-0.028 Sum_probs=57.0
Q ss_pred eecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEec-cCChHHHHHHHHhcCccEEee
Q 008342 214 VVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICLR-QVTAKAVYTAIATHGVTHFCA 289 (569)
Q Consensus 214 ~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 289 (569)
.+|+..+......... ..++.+++++...++-...+ +...++++..|+..+.+. .....++...+++.++..++.
T Consensus 42 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~-~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~ 120 (542)
T PRK07786 42 TTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEF-VESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVT 120 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEE
Confidence 5788887666555444 34788999998887754332 344555556666666553 457788999999999999988
Q ss_pred hHHHHHHH
Q 008342 290 APVVLNAI 297 (569)
Q Consensus 290 ~P~~~~~l 297 (569)
.+.....+
T Consensus 121 ~~~~~~~~ 128 (542)
T PRK07786 121 EAALAPVA 128 (542)
T ss_pred ccchHHHH
Confidence 77655443
No 246
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=33.72 E-value=2.7e+02 Score=28.95 Aligned_cols=83 Identities=16% Similarity=0.091 Sum_probs=57.0
Q ss_pred eecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEec-cCChHHHHHHHHhcCccEEee
Q 008342 214 VVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICLR-QVTAKAVYTAIATHGVTHFCA 289 (569)
Q Consensus 214 ~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 289 (569)
.+|...+......... ..++++++++....+-+. ......++++..|+..+.++ .....++...+++.+++.++.
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~-~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~ 89 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALGLREGDVVAILLENNP-EFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIV 89 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCH-HHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEE
Confidence 4677776555544433 457899999998887643 23344555566666666553 467788999999999999988
Q ss_pred hHHHHHHH
Q 008342 290 APVVLNAI 297 (569)
Q Consensus 290 ~P~~~~~l 297 (569)
.+.....+
T Consensus 90 ~~~~~~~~ 97 (502)
T PRK08276 90 SAALADTA 97 (502)
T ss_pred ccchhhHH
Confidence 87666554
No 247
>PRK13391 acyl-CoA synthetase; Provisional
Probab=33.58 E-value=4.3e+02 Score=27.52 Aligned_cols=95 Identities=14% Similarity=0.092 Sum_probs=62.1
Q ss_pred cCceEEEEeccCCCCCCcceeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-cc
Q 008342 194 EWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQ 269 (569)
Q Consensus 194 ~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~ 269 (569)
++.++++...++ -.+|...+......... ..++.+++++....+-...+ +...+.++..|...+.+ ..
T Consensus 11 p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~-~~~~~a~~~~G~~~~~l~~~ 82 (511)
T PRK13391 11 PDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRY-LEVCWAAERSGLYYTCVNSH 82 (511)
T ss_pred CCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhccEEeccccc
Confidence 445555544332 24788887666555444 34788999998887764332 33344555556655555 44
Q ss_pred CChHHHHHHHHhcCccEEeehHHHHHH
Q 008342 270 VTAKAVYTAIATHGVTHFCAAPVVLNA 296 (569)
Q Consensus 270 ~~~~~~~~~i~~~~~t~l~~~P~~~~~ 296 (569)
.....+...+++.++..++..+.....
T Consensus 83 ~~~~~l~~~l~~~~~~~li~~~~~~~~ 109 (511)
T PRK13391 83 LTPAEAAYIVDDSGARALITSAAKLDV 109 (511)
T ss_pred cCHHHHHHHHhccCCcEEEEchhhHHH
Confidence 677889999999999999887766544
No 248
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=33.45 E-value=3e+02 Score=32.34 Aligned_cols=95 Identities=9% Similarity=0.117 Sum_probs=67.1
Q ss_pred CCCceeeeeCC---------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCc--hhHHHHHHHhhhcCceEeecc
Q 008342 33 HPTRKSVVYGS---------KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNV--PAMYEAQFGAPMAGAVLNSIN 101 (569)
Q Consensus 33 ~p~~~a~~~~~---------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~ 101 (569)
.++.+|++... -.+|.+.+...+...... .++.++|++...+|-. ..+....++.+..|+..+...
T Consensus 780 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~ 856 (1146)
T PRK08633 780 KPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDV---FNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHP 856 (1146)
T ss_pred CCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHh---cCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeC
Confidence 45677766531 458888887766655443 4678889887776643 233344677778888877766
Q ss_pred ccCCHHHHHHHHhcCCceEEEEcccchHH
Q 008342 102 IRLNATVVAFILSHASSAVVIVDQEFFSL 130 (569)
Q Consensus 102 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 130 (569)
...+.+.+...+++.++.++...+.....
T Consensus 857 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 885 (1146)
T PRK08633 857 DPTDALGIAKLVAKHRATILLGTPTFLRL 885 (1146)
T ss_pred CCCCHHHHHHHHHHcCCeEEEecHHHHHH
Confidence 66788999999999999999988765543
No 249
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=33.44 E-value=4.4e+02 Score=25.26 Aligned_cols=92 Identities=11% Similarity=-0.053 Sum_probs=54.6
Q ss_pred CceeeeeCCeeeeHHHHHHHHHHHHHHHHhcC-CCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHH
Q 008342 35 TRKSVVYGSKHYTWHQTYRRCRRFASALSKLS-IGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFIL 113 (569)
Q Consensus 35 ~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g-~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 113 (569)
-++.+..++.+-|-.-=.+.+..+.....+.| +.+|++|.- ...+-.-..+.++|.+.|..+..+-|.........++
T Consensus 21 ~~i~~K~E~~nptGS~K~R~a~~~l~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~ 99 (298)
T TIGR01139 21 ANVFVKLEGRNPSGSVKDRIALNMIWDAEKRGLLKPGKTIVE-PTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLL 99 (298)
T ss_pred ceEEEEEcccCCCCcchHHHHHHHHHHHHHcCCCCCCCEEEE-eCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHH
Confidence 35666665533332111122222233344455 467777743 4344455555667777898777666655545568889
Q ss_pred hcCCceEEEEcccc
Q 008342 114 SHASSAVVIVDQEF 127 (569)
Q Consensus 114 ~~~~~~~vi~~~~~ 127 (569)
+..++++++++...
T Consensus 100 ~~~GA~v~~~~~~~ 113 (298)
T TIGR01139 100 KAYGAELVLTPGAE 113 (298)
T ss_pred HHcCCEEEEECCCC
Confidence 99999999998764
No 250
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=33.21 E-value=1.4e+02 Score=28.45 Aligned_cols=64 Identities=19% Similarity=0.121 Sum_probs=47.2
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHhhhcCc-eEeeccccCCHHHHHHHHhcCCceEEEEcccchH
Q 008342 66 SIGLGTTVSVIAPNVPAMYEAQFGAPMAGA-VLNSINIRLNATVVAFILSHASSAVVIVDQEFFS 129 (569)
Q Consensus 66 g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 129 (569)
.+.+||.|.=-..|+.---+.+-=|-..|. +...+..+-..+++...|+.++++.||++++...
T Consensus 157 ~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~ 221 (354)
T KOG0025|consen 157 QLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRD 221 (354)
T ss_pred hcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcc
Confidence 578899998888888644444433444454 4444566677899999999999999999988654
No 251
>PLN02574 4-coumarate--CoA ligase-like
Probab=32.99 E-value=2.6e+02 Score=29.69 Aligned_cols=84 Identities=14% Similarity=0.092 Sum_probs=56.8
Q ss_pred eecchHHHHHHHHhHh---H-hCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEec-cCChHHHHHHHHhcCccEEe
Q 008342 214 VVSHRGAYLMSLNGAL---I-WGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICLR-QVTAKAVYTAIATHGVTHFC 288 (569)
Q Consensus 214 ~~t~~~~~~~~~~~~~---~-~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 288 (569)
.+|+..+......... . .++.++|++....+-+..+ ....+.++..|+..+.+. .....++...+++.++..++
T Consensus 66 ~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~-~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~ 144 (560)
T PLN02574 66 SISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYF-PVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAF 144 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchH-HHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEE
Confidence 3677776555544333 3 6889999999888754322 333445555666665553 46778899999999999998
Q ss_pred ehHHHHHHHH
Q 008342 289 AAPVVLNAIA 298 (569)
Q Consensus 289 ~~P~~~~~l~ 298 (569)
..+.....+.
T Consensus 145 ~~~~~~~~~~ 154 (560)
T PLN02574 145 TSPENVEKLS 154 (560)
T ss_pred ECHHHHHHHH
Confidence 8877665553
No 252
>PRK06178 acyl-CoA synthetase; Validated
Probab=32.94 E-value=2.7e+02 Score=29.59 Aligned_cols=84 Identities=12% Similarity=0.042 Sum_probs=59.6
Q ss_pred eecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEee
Q 008342 214 VVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFCA 289 (569)
Q Consensus 214 ~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~ 289 (569)
.+|+..+...+..... ..++++++++...++-...+ ....++++..|+..+.+ +.....++...+++.++..++.
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~ 136 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQF-HIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLA 136 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHH-HHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEE
Confidence 5788887666554444 34788999998887765432 34455555666666655 4567789999999999999999
Q ss_pred hHHHHHHHH
Q 008342 290 APVVLNAIA 298 (569)
Q Consensus 290 ~P~~~~~l~ 298 (569)
.+.....+.
T Consensus 137 ~~~~~~~l~ 145 (567)
T PRK06178 137 LDQLAPVVE 145 (567)
T ss_pred ccchHHHHH
Confidence 888766554
No 253
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=32.81 E-value=2.5e+02 Score=29.72 Aligned_cols=83 Identities=10% Similarity=-0.017 Sum_probs=57.5
Q ss_pred eeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEe
Q 008342 213 VVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFC 288 (569)
Q Consensus 213 v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~ 288 (569)
..+|+.++......... ..++.++|++...++-.... ....++++..|+..+.+ +.....++...+++.+++.++
T Consensus 47 ~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~-~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi 125 (557)
T PRK07059 47 KAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQY-PVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIV 125 (557)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH-HHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEE
Confidence 36788888666555444 34788999998887764333 33345555666666655 446778999999999999999
Q ss_pred ehHHHHHH
Q 008342 289 AAPVVLNA 296 (569)
Q Consensus 289 ~~P~~~~~ 296 (569)
....+...
T Consensus 126 ~~~~~~~~ 133 (557)
T PRK07059 126 VLENFATT 133 (557)
T ss_pred EchhhHHH
Confidence 87665443
No 254
>PRK07470 acyl-CoA synthetase; Validated
Probab=32.65 E-value=3.9e+02 Score=27.98 Aligned_cols=98 Identities=11% Similarity=0.004 Sum_probs=59.9
Q ss_pred CCCceeeeeCC---------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeec-cc
Q 008342 33 HPTRKSVVYGS---------KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSI-NI 102 (569)
Q Consensus 33 ~p~~~a~~~~~---------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l-~~ 102 (569)
.++.++++... -.+|++.+...+......+. .++.++|++...+|-+..+-...+..+..|+..+.+ ..
T Consensus 161 ~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~-~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~~ 239 (528)
T PRK07470 161 DHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLM-PGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPSE 239 (528)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhc-cCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEeccc
Confidence 34556665532 35788877544332222111 256778888888876544322233334445544434 34
Q ss_pred cCCHHHHHHHHhcCCceEEEEcccchHHH
Q 008342 103 RLNATVVAFILSHASSAVVIVDQEFFSLA 131 (569)
Q Consensus 103 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 131 (569)
..+.+.+...++..++.+++..+.....+
T Consensus 240 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 268 (528)
T PRK07470 240 RFDPAEVWALVERHRVTNLFTVPTILKML 268 (528)
T ss_pred CcCHHHHHHHHHhcCCeEEechHHHHHHH
Confidence 67888999999999999999888766544
No 255
>PRK13382 acyl-CoA synthetase; Provisional
Probab=32.43 E-value=2.9e+02 Score=29.10 Aligned_cols=81 Identities=12% Similarity=-0.024 Sum_probs=55.0
Q ss_pred eecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEec-cCChHHHHHHHHhcCccEEee
Q 008342 214 VVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICLR-QVTAKAVYTAIATHGVTHFCA 289 (569)
Q Consensus 214 ~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 289 (569)
.+|...+...+..... ..++.+++++...++-+.. -+...+++...|...+.+. .....++...+++.+++.++.
T Consensus 68 ~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 146 (537)
T PRK13382 68 TLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRG-FVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTVIY 146 (537)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHH-HHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEEEE
Confidence 5777777666555444 4578899999988875443 2334444455566555553 456788999999999999988
Q ss_pred hHHHHH
Q 008342 290 APVVLN 295 (569)
Q Consensus 290 ~P~~~~ 295 (569)
......
T Consensus 147 ~~~~~~ 152 (537)
T PRK13382 147 DEEFSA 152 (537)
T ss_pred chhhHH
Confidence 665444
No 256
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=32.35 E-value=4.3e+02 Score=28.54 Aligned_cols=102 Identities=16% Similarity=0.135 Sum_probs=71.7
Q ss_pred hhhCCCceeeeeC--C-------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHH-HHhhhcCceEee
Q 008342 30 ATLHPTRKSVVYG--S-------KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQ-FGAPMAGAVLNS 99 (569)
Q Consensus 30 a~~~p~~~a~~~~--~-------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~-lA~~~~G~~~v~ 99 (569)
+...|+..|.+.. + --+||+-+...+..+...+. -++++|++..++|-.--+=-++ +++...|.+.+.
T Consensus 186 ~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~--~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~ 263 (613)
T COG1022 186 APPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP--PIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVL 263 (613)
T ss_pred CCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC--CCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEE
Confidence 3457888776542 2 45999999999988888775 3789999999999754332222 444444443332
Q ss_pred ccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHH
Q 008342 100 INIRLNATVVAFILSHASSAVVIVDQEFFSLAEEAL 135 (569)
Q Consensus 100 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~ 135 (569)
...+...+..-+...+|.+++.-+...+.+...+
T Consensus 264 --~~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I 297 (613)
T COG1022 264 --FKEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGI 297 (613)
T ss_pred --ecCCHHHHHHHHHHhCCeEEeechHHHHHHHHHH
Confidence 3346788899999999999998888877776543
No 257
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=32.28 E-value=2.2e+02 Score=28.48 Aligned_cols=66 Identities=15% Similarity=0.157 Sum_probs=40.2
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccc-----cCCHHHHHHHHhc---CCceEEEEc
Q 008342 56 RRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINI-----RLNATVVAFILSH---ASSAVVIVD 124 (569)
Q Consensus 56 ~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~l~~~l~~---~~~~~vi~~ 124 (569)
..+...+...++++||.|.+-.+.. ....-++...|+.++.++. ..+.+.+...+.. -+.++|+..
T Consensus 55 ~al~~~l~al~~~~Gd~Viv~~~~~---~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~ 128 (380)
T TIGR03588 55 SALHIACLALGVGPGDRVWTTPITF---VATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPV 128 (380)
T ss_pred HHHHHHHHHcCCCCCCEEEeCCcch---HHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEe
Confidence 3344444555788999877765543 3334556677877766544 2456778777763 356666643
No 258
>PTZ00297 pantothenate kinase; Provisional
Probab=32.25 E-value=4.3e+02 Score=32.01 Aligned_cols=97 Identities=13% Similarity=-0.015 Sum_probs=64.6
Q ss_pred eeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHH-HHHHHHhcceEEEeccCChHHHHHHHHhcCccEEe
Q 008342 213 VVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSY-TWSLAALCGTSICLRQVTAKAVYTAIATHGVTHFC 288 (569)
Q Consensus 213 v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~ 288 (569)
..+|++.+...+..... .+|+.++|++...++-.. -|.. .+++...|+..+.+. .+..++...+++.++.+++
T Consensus 456 ~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~--Ewvia~lA~~~~GaV~VPly-~t~~eL~yIL~~S~akvVf 532 (1452)
T PTZ00297 456 EWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASR--NIVILEVACALYGFTTLPLV-GKGSTMRTLIDEHKIKVVF 532 (1452)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCCEEEeCC-CCHHHHHHHHHhcCCcEEE
Confidence 35788877666555443 568999999988887542 2333 344445555555543 3567899999999999999
Q ss_pred ehHHHHHHHHccCCCCCCCCcccceeeeecC
Q 008342 289 AAPVVLNAIANASPEDTILPLTNVVNVNTAG 319 (569)
Q Consensus 289 ~~P~~~~~l~~~~~~~~~~~l~~l~~~~~~g 319 (569)
.....+..+..... +.++.+++-+
T Consensus 533 v~~~~l~kl~~i~~-------~~Lr~IIv~d 556 (1452)
T PTZ00297 533 ADRNSVAAILTCRS-------RKLETVVYTH 556 (1452)
T ss_pred EchhHHHHHHhhcc-------cCCcEEEEEC
Confidence 98888877765321 2466666543
No 259
>PLN02479 acetate-CoA ligase
Probab=32.24 E-value=3e+02 Score=29.24 Aligned_cols=81 Identities=7% Similarity=0.061 Sum_probs=56.2
Q ss_pred eecchHHHHHHHHhHhH---hCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEee
Q 008342 214 VVSHRGAYLMSLNGALI---WGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFCA 289 (569)
Q Consensus 214 ~~t~~~~~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~ 289 (569)
.+|...+.......... .++.++|++....+-.-.+ +...++++..|+..+.+ +.....++...+++.++..++.
T Consensus 45 ~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~-~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~ 123 (567)
T PLN02479 45 RYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAM-YEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMV 123 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHH-HHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEE
Confidence 47888876666555543 4889999999888753322 23344455556555555 4567889999999999999998
Q ss_pred hHHHHH
Q 008342 290 APVVLN 295 (569)
Q Consensus 290 ~P~~~~ 295 (569)
.+..+.
T Consensus 124 ~~~~~~ 129 (567)
T PLN02479 124 DQEFFT 129 (567)
T ss_pred chhhhh
Confidence 776544
No 260
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=32.17 E-value=2.5e+02 Score=29.24 Aligned_cols=84 Identities=11% Similarity=0.069 Sum_probs=56.7
Q ss_pred eecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEee
Q 008342 214 VVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFCA 289 (569)
Q Consensus 214 ~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~ 289 (569)
.+|...+...+..... ..++.+++++....|-... .....++++..|+..+.+ +.....++...+++.+++.++.
T Consensus 11 ~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~ 89 (509)
T PRK12406 11 RRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFA-FFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIA 89 (509)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEE
Confidence 4567776555544443 4578899999888776432 233444455556665555 4567889999999999999998
Q ss_pred hHHHHHHHH
Q 008342 290 APVVLNAIA 298 (569)
Q Consensus 290 ~P~~~~~l~ 298 (569)
.....+.+.
T Consensus 90 ~~~~~~~~~ 98 (509)
T PRK12406 90 HADLLHGLA 98 (509)
T ss_pred ccchhhhhh
Confidence 776666543
No 261
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=31.83 E-value=2e+02 Score=28.73 Aligned_cols=62 Identities=15% Similarity=0.179 Sum_probs=35.8
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeecccc-----CCHHHHHHHHhcCCceEEE
Q 008342 57 RFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIR-----LNATVVAFILSHASSAVVI 122 (569)
Q Consensus 57 ~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi 122 (569)
.+...|...++++||.|.+-.+. +.....++...|+.++.++.+ .+.+.+...+.. +.++|+
T Consensus 60 al~lal~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 60 GMHITLMALGIGPGDEVITPSLT---WVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHHHHcCCCCCCEEEECCCc---HHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 34444555567888887765443 333334555678777666532 346667776643 456665
No 262
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=31.74 E-value=2.4e+02 Score=29.92 Aligned_cols=82 Identities=11% Similarity=-0.010 Sum_probs=56.6
Q ss_pred eeecchHHHHHHHHhHhH----hCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEE
Q 008342 213 VVVSHRGAYLMSLNGALI----WGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHF 287 (569)
Q Consensus 213 v~~t~~~~~~~~~~~~~~----~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l 287 (569)
..+|+..+.......... .++.++|++...++-+..+ ....+++...|+..+.+ +....+++...+++.++..+
T Consensus 48 ~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~-~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~i 126 (562)
T PRK05677 48 KTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQY-PVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKAL 126 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEE
Confidence 357888887776655543 3788999999988764332 23344455556655555 45677899999999999999
Q ss_pred eehHHHHH
Q 008342 288 CAAPVVLN 295 (569)
Q Consensus 288 ~~~P~~~~ 295 (569)
+.......
T Consensus 127 i~~~~~~~ 134 (562)
T PRK05677 127 VCLANMAH 134 (562)
T ss_pred EEecchhh
Confidence 88665544
No 263
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=31.51 E-value=4.7e+02 Score=24.96 Aligned_cols=90 Identities=9% Similarity=-0.065 Sum_probs=55.5
Q ss_pred CceeeeeCCeee--eHHHHHHHHHHHHHHHHhcCC-CCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHH
Q 008342 35 TRKSVVYGSKHY--TWHQTYRRCRRFASALSKLSI-GLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAF 111 (569)
Q Consensus 35 ~~~a~~~~~~~~--Ty~el~~~~~~la~~L~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 111 (569)
-++.+-.++.+- |++. +.....+.. +.+.|. ++|+.|.. ...+-....+.++|.+.|..+..+-|.........
T Consensus 17 ~~i~~K~E~~~ptgS~K~-R~a~~~l~~-a~~~g~~~~~~~vv~-~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~ 93 (291)
T cd01561 17 AEIYAKLEFFNPGGSVKD-RIALYMIED-AEKRGLLKPGTTIIE-PTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRK 93 (291)
T ss_pred CeEEEEecccCCCCcchH-HHHHHHHHH-HHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHH
Confidence 356666655333 3222 222222333 334453 35666554 55556666777788889987777666655566678
Q ss_pred HHhcCCceEEEEcccc
Q 008342 112 ILSHASSAVVIVDQEF 127 (569)
Q Consensus 112 ~l~~~~~~~vi~~~~~ 127 (569)
.++..++++++++...
T Consensus 94 ~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 94 LLRALGAEVILTPEAE 109 (291)
T ss_pred HHHHcCCEEEEeCCCC
Confidence 8999999999998765
No 264
>PRK05852 acyl-CoA synthetase; Validated
Probab=31.32 E-value=3.4e+02 Score=28.49 Aligned_cols=86 Identities=8% Similarity=0.035 Sum_probs=60.6
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCch--hHHHHHHHhhhcCceEee-ccccCCHHHHHHHHhcCCceE
Q 008342 44 KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVP--AMYEAQFGAPMAGAVLNS-INIRLNATVVAFILSHASSAV 120 (569)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~-l~~~~~~~~l~~~l~~~~~~~ 120 (569)
-.+|+..+...+..+...+ +++++|++...+|-.. .++..+++++..|...+. -....++..+...++..++..
T Consensus 194 v~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~ 270 (534)
T PRK05852 194 VPWTHANIASSVRAIITGY---RLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATW 270 (534)
T ss_pred EEecHHHHHHHHHHHHHHh---CCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcE
Confidence 3478888877666665444 6788998887777543 445567777777776443 233566788889999999999
Q ss_pred EEEcccchHHHH
Q 008342 121 VIVDQEFFSLAE 132 (569)
Q Consensus 121 vi~~~~~~~~~~ 132 (569)
++..+.....+.
T Consensus 271 ~~~~P~~~~~l~ 282 (534)
T PRK05852 271 YTAVPTIHQILL 282 (534)
T ss_pred EEcChHHHHHHH
Confidence 998887655443
No 265
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=31.31 E-value=3.9e+02 Score=28.03 Aligned_cols=94 Identities=13% Similarity=0.031 Sum_probs=64.5
Q ss_pred CCCceeeeeC--C-------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhH--HH-HHHHhhhcCceEeec
Q 008342 33 HPTRKSVVYG--S-------KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAM--YE-AQFGAPMAGAVLNSI 100 (569)
Q Consensus 33 ~p~~~a~~~~--~-------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~--~~-~~lA~~~~G~~~v~l 100 (569)
.++.+|++.. + -.+|...+...+..... ..++.++|++...+|....+ .. ..++++..|++.+..
T Consensus 181 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~ 257 (527)
T TIGR02275 181 KSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVE---ICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLA 257 (527)
T ss_pred CCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHh---hcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEEC
Confidence 4566666543 1 45888887766554333 45678899998888754332 22 357778889887654
Q ss_pred cccCCHHHHHHHHhcCCceEEEEcccchHH
Q 008342 101 NIRLNATVVAFILSHASSAVVIVDQEFFSL 130 (569)
Q Consensus 101 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 130 (569)
+...+..+...+++.++.+++..+.....
T Consensus 258 -~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ 286 (527)
T TIGR02275 258 -PDPSPTDCFPLIERHKVTVTALVPPAVAL 286 (527)
T ss_pred -CCCCHHHHHHHHHHhCCeEEEecHHHHHH
Confidence 44567888889999999999988776543
No 266
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=30.85 E-value=80 Score=28.03 Aligned_cols=34 Identities=18% Similarity=0.351 Sum_probs=28.4
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEc
Q 008342 44 KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIA 77 (569)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~ 77 (569)
.-+||.++.+.+.++|..+.+-|.+|.-.|+|.-
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~s~~~PDvIiaiaR 38 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRASGFKPDVIVAIAR 38 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHHcCCCCCEEEEEcC
Confidence 4589999999999999999999998776665543
No 267
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=30.55 E-value=2.3e+02 Score=29.84 Aligned_cols=77 Identities=12% Similarity=0.006 Sum_probs=53.3
Q ss_pred eeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEe
Q 008342 213 VVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFC 288 (569)
Q Consensus 213 v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~ 288 (569)
..+|...+......... ..++.++|++...+|-+. -.....++++..|+..+.+ +.....++...++..++.+++
T Consensus 48 ~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~ 126 (547)
T PRK06087 48 ASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWC-EFTIIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAKMFF 126 (547)
T ss_pred CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCeEEE
Confidence 35788887666655554 358899999998876543 2234445555666666555 446778899999999999887
Q ss_pred eh
Q 008342 289 AA 290 (569)
Q Consensus 289 ~~ 290 (569)
..
T Consensus 127 ~~ 128 (547)
T PRK06087 127 AP 128 (547)
T ss_pred Ee
Confidence 64
No 268
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=30.53 E-value=4.1e+02 Score=27.49 Aligned_cols=83 Identities=11% Similarity=0.073 Sum_probs=60.0
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchh-HHHHHHHhhhcCceEeecccc--CCHHHHHHHHhcCCceE
Q 008342 44 KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPA-MYEAQFGAPMAGAVLNSINIR--LNATVVAFILSHASSAV 120 (569)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~--~~~~~l~~~l~~~~~~~ 120 (569)
-.+|+..+...+..+... .++..++++....|-+.. .+..+++++..|+..+..++. .+...+...++..++..
T Consensus 159 v~~s~~~~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 235 (502)
T TIGR01734 159 VQISHDNLVSFTNWMLAD---FPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLNV 235 (502)
T ss_pred EEEecHHHHHHHHHHHHh---CCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCeE
Confidence 458888887666544443 477788888777766532 355677889999998877654 35678888899999998
Q ss_pred EEEcccchH
Q 008342 121 VIVDQEFFS 129 (569)
Q Consensus 121 vi~~~~~~~ 129 (569)
+...+....
T Consensus 236 ~~~~p~~~~ 244 (502)
T TIGR01734 236 WVSTPSFVD 244 (502)
T ss_pred EEEChhHHH
Confidence 888776544
No 269
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=30.47 E-value=7.1e+02 Score=26.76 Aligned_cols=84 Identities=11% Similarity=-0.052 Sum_probs=56.1
Q ss_pred eeecchHHHHHHHHhHhHh--CCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-cc-CC--hHHHHHHHHhcCccE
Q 008342 213 VVVSHRGAYLMSLNGALIW--GMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQ-VT--AKAVYTAIATHGVTH 286 (569)
Q Consensus 213 v~~t~~~~~~~~~~~~~~~--~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~-~~--~~~~~~~i~~~~~t~ 286 (569)
..+|+..+...+......+ .+.++|++...++-...+ +...+++...|+..+.+ .. .. ++++...+++.++..
T Consensus 67 ~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~e~-~~~~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~ 145 (612)
T PRK12476 67 VELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGIDY-VAGFFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTV 145 (612)
T ss_pred eEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCChhH-HHHHHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCE
Confidence 4678888766665544433 268999999888876432 23344455556655555 22 22 678999999999999
Q ss_pred EeehHHHHHHH
Q 008342 287 FCAAPVVLNAI 297 (569)
Q Consensus 287 l~~~P~~~~~l 297 (569)
++..+..+..+
T Consensus 146 li~~~~~~~~~ 156 (612)
T PRK12476 146 VLTTTAAAEAV 156 (612)
T ss_pred EEEcHHHHHHH
Confidence 99987766543
No 270
>PRK06382 threonine dehydratase; Provisional
Probab=30.45 E-value=3.1e+02 Score=27.79 Aligned_cols=92 Identities=10% Similarity=0.080 Sum_probs=53.1
Q ss_pred CCceeeeeCCee--eeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHH
Q 008342 34 PTRKSVVYGSKH--YTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAF 111 (569)
Q Consensus 34 p~~~a~~~~~~~--~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 111 (569)
..++.+-.++.+ =||++= -....+. .+.+.+.++| | +....+-....+.++|...|..+..+-|...+..-..
T Consensus 39 g~~v~~K~E~~nptGSfK~R-ga~~~i~-~~~~~~~~~g--v-v~aSsGN~g~a~A~aa~~~G~~~~ivmp~~~~~~k~~ 113 (406)
T PRK06382 39 GGDIYFKLENFQKTGSFKSR-GAVFKFS-KLSEDELRNG--V-ITASAGNHAQGVAYAASINGIDAKIVMPEYTIPQKVN 113 (406)
T ss_pred CCEEEEEecCCCCCCCCHHH-HHHHHHH-hcchhccCCe--E-EEECCCHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHH
Confidence 345666666533 333321 1122222 2333333444 3 2333344555567888899987777766666566677
Q ss_pred HHhcCCceEEEEcccchHH
Q 008342 112 ILSHASSAVVIVDQEFFSL 130 (569)
Q Consensus 112 ~l~~~~~~~vi~~~~~~~~ 130 (569)
.++.++++++++.......
T Consensus 114 ~~~~~GA~Vv~~~~~~~~a 132 (406)
T PRK06382 114 AVEAYGAHVILTGRDYDEA 132 (406)
T ss_pred HHHHcCCEEEEECCCHHHH
Confidence 7999999999988754443
No 271
>PRK10717 cysteine synthase A; Provisional
Probab=30.38 E-value=3.5e+02 Score=26.48 Aligned_cols=89 Identities=10% Similarity=-0.089 Sum_probs=54.0
Q ss_pred CceeeeeCCee--eeHHHHHHHHHHHHHHHHhcC-CCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHH
Q 008342 35 TRKSVVYGSKH--YTWHQTYRRCRRFASALSKLS-IGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAF 111 (569)
Q Consensus 35 ~~~a~~~~~~~--~Ty~el~~~~~~la~~L~~~g-~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 111 (569)
-++.+-.++.+ =|++. +-....+...+ +.| +++|+.|.. ...+-.-..+.++|.+.|..+..+-|.........
T Consensus 28 ~~i~~K~E~~nptGS~K~-Rga~~~v~~a~-~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~ 104 (330)
T PRK10717 28 CEILGKAEFLNPGGSVKD-RAALNIIWDAE-KRGLLKPGGTIVE-GTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKD 104 (330)
T ss_pred CeEEEEeeccCCCCCchH-HHHHHHHHHHH-HcCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHH
Confidence 35666555432 33332 22223333333 344 467776655 44445556666777788987666666555566788
Q ss_pred HHhcCCceEEEEccc
Q 008342 112 ILSHASSAVVIVDQE 126 (569)
Q Consensus 112 ~l~~~~~~~vi~~~~ 126 (569)
.++..++++++++..
T Consensus 105 ~~~~~GA~V~~~~~~ 119 (330)
T PRK10717 105 LLRALGAELVLVPAA 119 (330)
T ss_pred HHHHcCCEEEEeCCc
Confidence 999999999999863
No 272
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=30.18 E-value=1.4e+02 Score=23.10 Aligned_cols=53 Identities=8% Similarity=-0.168 Sum_probs=38.0
Q ss_pred eeeeHHHHHHH----HHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCce
Q 008342 44 KHYTWHQTYRR----CRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAV 96 (569)
Q Consensus 44 ~~~Ty~el~~~----~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 96 (569)
..+.+.++... ...+...+...++.+++.|.+++.+......+...+..+|..
T Consensus 36 ~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 36 INIPLSSLPDALALSEEEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred EEechHHhhhhhCCCHHHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 45667776543 235666777777778889999999987776677777788863
No 273
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=30.11 E-value=6.4e+02 Score=26.09 Aligned_cols=59 Identities=17% Similarity=0.108 Sum_probs=38.5
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccc-cCCHHHHHHHHhcCCceEEEEccc
Q 008342 67 IGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINI-RLNATVVAFILSHASSAVVIVDQE 126 (569)
Q Consensus 67 ~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~-~~~~~~l~~~l~~~~~~~vi~~~~ 126 (569)
+.+||+|++=-|. .......+-...+-++.+|++. .+..+.+...++..++|++++.+.
T Consensus 176 ~~pGd~v~vE~Pt-Y~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~ 235 (459)
T COG1167 176 LDPGDTVLVEDPT-YPGALQALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPT 235 (459)
T ss_pred CCCCCEEEEcCCC-cHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCC
Confidence 3477888775443 3334444444444445555543 566899999999889999999765
No 274
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=30.09 E-value=2.8e+02 Score=27.86 Aligned_cols=107 Identities=18% Similarity=0.117 Sum_probs=57.2
Q ss_pred ecchHHHHHHH---HhHhHhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe--ccCChHHHHHHHHhcCccEEee
Q 008342 215 VSHRGAYLMSL---NGALIWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL--RQVTAKAVYTAIATHGVTHFCA 289 (569)
Q Consensus 215 ~t~~~~~~~~~---~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~--~~~~~~~~~~~i~~~~~t~l~~ 289 (569)
+|.+.+...+. +.....|++++|+++.-+|-. ..+...+.+++--|..-++ ++-...++-...+...++.++.
T Consensus 54 ~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~--~ef~~~~FALlrlGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~ 131 (542)
T COG1021 54 LSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNV--AEFYITFFALLRLGVAPVLALPSHRASELGAFASQIEAALLIV 131 (542)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCch--HHHHHHHHHHHHcCcchhhccchhhHHHHHHHHHhhcchheee
Confidence 67776655543 344567999999999888753 3444444444444433322 3333344444444444444432
Q ss_pred h----HHHHHHHHccCCCCCCCCcccceeeeecCCCCCHHHH
Q 008342 290 A----PVVLNAIANASPEDTILPLTNVVNVNTAGAPPPPSLL 327 (569)
Q Consensus 290 ~----P~~~~~l~~~~~~~~~~~l~~l~~~~~~g~~l~~~~~ 327 (569)
. +..++.+++..... .+++|.+++.|+.=.+...
T Consensus 132 ~~~~~gFd~~~~ar~~~a~----~~tlr~v~v~ge~~~~~~~ 169 (542)
T COG1021 132 ARQHSGFDYRPFARELVAK----HPTLRHVIVAGEAEHPSVL 169 (542)
T ss_pred chhhcccCcHHHHHHHHhh----CCcceEEEEccCCCCcchh
Confidence 1 12222232221111 5788999988888655333
No 275
>cd00754 MoaD Ubiquitin domain of MoaD-like proteins. MoaD family. Members of this family are involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor of a diverse group of redox enzymes. Moco biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. Moco contains a tricyclic pyranopterin, termed molybdopterin (MPT), that contains the cis-dithiolene group responsible for molybdenum ligation. This dithiolene group is generated by MPT synthase, the second major step in Moco biosynthesis. MPT synthase consists of a large (MoeE) and small (MoaD) subunit. The small subunit is inserted into the lare subunit to form the active site. The small subunit, which is structurally similar to ubiquitin, contains a C-terminal thiocarboxylated glycine residue that serves as a sulfur donor for the synthesis of the MPT dithiolene group.
Probab=30.08 E-value=1.4e+02 Score=21.76 Aligned_cols=45 Identities=16% Similarity=0.178 Sum_probs=32.5
Q ss_pred ccCHHHHHHHhhhhCCC-------ceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcC
Q 008342 19 ALTPLWFINRAATLHPT-------RKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAP 78 (569)
Q Consensus 19 ~~~l~~~l~~~a~~~p~-------~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~ 78 (569)
..|+.+++++...++|. ..++..+++.++ .+.-++.||+|+++-|
T Consensus 25 ~~tv~~ll~~l~~~~~~~~~~~~~~~~v~vNg~~v~---------------~~~~l~~gD~v~i~pp 76 (80)
T cd00754 25 GATVGELLDALEARYPGLLEELLARVRIAVNGEYVR---------------LDTPLKDGDEVAIIPP 76 (80)
T ss_pred CCcHHHHHHHHHHHCchHHHhhhhcEEEEECCeEcC---------------CCcccCCCCEEEEeCC
Confidence 67999999999988875 444555565555 2234788999999765
No 276
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=29.91 E-value=3.3e+02 Score=32.94 Aligned_cols=97 Identities=9% Similarity=-0.128 Sum_probs=60.2
Q ss_pred CcCceEEEEeccCCCCCCcceeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEec-
Q 008342 193 DEWQSIALGYTSGTTASPKGVVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICLR- 268 (569)
Q Consensus 193 ~~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~- 268 (569)
.++.++++...+...+......+|++.+...+..... ..++++++++...++-+..+ ....++++..|+..+.+.
T Consensus 249 ~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~-i~~~lA~l~~G~~~vpldp 327 (1389)
T TIGR03443 249 HPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDL-VVAVMGVLKAGATFSVIDP 327 (1389)
T ss_pred CCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHH-HHHHHHHHhhCcEEeccCC
Confidence 3455666543221111122346889888776655554 34889999999888765332 334445555666666554
Q ss_pred cCChHHHHHHHHhcCccEEeeh
Q 008342 269 QVTAKAVYTAIATHGVTHFCAA 290 (569)
Q Consensus 269 ~~~~~~~~~~i~~~~~t~l~~~ 290 (569)
...++++...+++.++..++..
T Consensus 328 ~~p~~~~~~~l~~~~~~~li~~ 349 (1389)
T TIGR03443 328 AYPPARQTIYLSVAKPRALIVI 349 (1389)
T ss_pred CCcHHHHHHHHHhcCCCEEEEe
Confidence 4566788888899898887764
No 277
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=29.82 E-value=4.1e+02 Score=23.74 Aligned_cols=99 Identities=5% Similarity=-0.045 Sum_probs=63.7
Q ss_pred eCCeeeeHHHHHHHHHHHHHHHHh-------cCCCCCCEEEEEcCCc-h---hHHHHHHHhhhcCceEeeccccCCHHHH
Q 008342 41 YGSKHYTWHQTYRRCRRFASALSK-------LSIGLGTTVSVIAPNV-P---AMYEAQFGAPMAGAVLNSINIRLNATVV 109 (569)
Q Consensus 41 ~~~~~~Ty~el~~~~~~la~~L~~-------~g~~~g~~V~i~~~~~-~---~~~~~~lA~~~~G~~~v~l~~~~~~~~l 109 (569)
+.+..++..|..-.+..+-..+.. ..-..+.+|.+....+ . ...++...+-..|.-++.+..+.+.+++
T Consensus 46 w~~~~i~va~e~~as~~~~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l 125 (201)
T cd02070 46 YEEGEIFVPELLMAADAMKAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEF 125 (201)
T ss_pred HccCCeeHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 345678888887776655554433 1211234665554443 2 2344444556789999999999999999
Q ss_pred HHHHhcCCceEEEEcccc---hHHHHHHHHHHh
Q 008342 110 AFILSHASSAVVIVDQEF---FSLAEEALKMME 139 (569)
Q Consensus 110 ~~~l~~~~~~~vi~~~~~---~~~~~~~~~~~~ 139 (569)
...+++.+|++|..+-.. ...+.+..+.+.
T Consensus 126 ~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr 158 (201)
T cd02070 126 VEAVKEHKPDILGLSALMTTTMGGMKEVIEALK 158 (201)
T ss_pred HHHHHHcCCCEEEEeccccccHHHHHHHHHHHH
Confidence 999999999999877543 334444444443
No 278
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=29.78 E-value=2.9e+02 Score=28.81 Aligned_cols=82 Identities=9% Similarity=-0.051 Sum_probs=55.5
Q ss_pred eecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEee
Q 008342 214 VVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFCA 289 (569)
Q Consensus 214 ~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~ 289 (569)
.+|+..+......... ..++.++|++....+-+.-+ ....+++...|...+.+ +...++++...+++.+++.++.
T Consensus 37 ~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~-~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~ 115 (517)
T PRK08008 37 RYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEF-IFCWFGLAKIGAIMVPINARLLREESAWILQNSQASLLVT 115 (517)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEE
Confidence 4677776655554443 45889999999887764332 23334445556555555 4578899999999999999988
Q ss_pred hHHHHHH
Q 008342 290 APVVLNA 296 (569)
Q Consensus 290 ~P~~~~~ 296 (569)
.+.....
T Consensus 116 ~~~~~~~ 122 (517)
T PRK08008 116 SAQFYPM 122 (517)
T ss_pred ecchhHH
Confidence 7765443
No 279
>COG2879 Uncharacterized small protein [Function unknown]
Probab=29.72 E-value=70 Score=22.18 Aligned_cols=27 Identities=19% Similarity=0.594 Sum_probs=19.0
Q ss_pred HHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHH
Q 008342 24 WFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRR 57 (569)
Q Consensus 24 ~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~ 57 (569)
..+++--..|||++. +||.|+.+..+.
T Consensus 27 nYVehmr~~hPd~p~-------mT~~EFfrec~d 53 (65)
T COG2879 27 NYVEHMRKKHPDKPP-------MTYEEFFRECQD 53 (65)
T ss_pred HHHHHHHHhCcCCCc-------ccHHHHHHHHHH
Confidence 567777778888764 678888776543
No 280
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=29.69 E-value=4.5e+02 Score=27.59 Aligned_cols=79 Identities=15% Similarity=0.029 Sum_probs=53.3
Q ss_pred eeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEe
Q 008342 213 VVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFC 288 (569)
Q Consensus 213 v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~ 288 (569)
..+|+..+......... ..++.+++++...++-.. -.....+.+...|+..+.+ +...++++...++..+++.++
T Consensus 52 ~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li 130 (538)
T TIGR03208 52 RRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRW-EFTALYLACARIGAVLNPLMPIFRERELSFMLNHADSKVFV 130 (538)
T ss_pred ceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHhcCEEEeccCcccCHHHHHHHHHhcCCeEEE
Confidence 45788887666544444 457889999998877543 2233444555566655555 346778899999999999988
Q ss_pred ehHH
Q 008342 289 AAPV 292 (569)
Q Consensus 289 ~~P~ 292 (569)
..+.
T Consensus 131 ~~~~ 134 (538)
T TIGR03208 131 VPSV 134 (538)
T ss_pred Eccc
Confidence 7553
No 281
>PRK12582 acyl-CoA synthetase; Provisional
Probab=28.87 E-value=2.6e+02 Score=30.22 Aligned_cols=78 Identities=9% Similarity=-0.154 Sum_probs=51.8
Q ss_pred eeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEecc-CC-----hHHHHHHHHhcC
Q 008342 213 VVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICLRQ-VT-----AKAVYTAIATHG 283 (569)
Q Consensus 213 v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~-~~-----~~~~~~~i~~~~ 283 (569)
-.+|++.+...+..... ..++.++|++...++-.. --....++++..|+..+.+.. .. .+++...+++.+
T Consensus 79 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~ 157 (624)
T PRK12582 79 RKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSI-EHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVK 157 (624)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCH-HHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcC
Confidence 46788887766655444 458899999998887432 223344455555666555543 33 378888999999
Q ss_pred ccEEeehH
Q 008342 284 VTHFCAAP 291 (569)
Q Consensus 284 ~t~l~~~P 291 (569)
+..++...
T Consensus 158 ~~~vi~~~ 165 (624)
T PRK12582 158 PRVVFAQS 165 (624)
T ss_pred CcEEEecC
Confidence 88887643
No 282
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=28.33 E-value=60 Score=23.24 Aligned_cols=19 Identities=32% Similarity=0.251 Sum_probs=14.8
Q ss_pred HHHHHHhcCCCCCCEEEEE
Q 008342 58 FASALSKLSIGLGTTVSVI 76 (569)
Q Consensus 58 la~~L~~~g~~~g~~V~i~ 76 (569)
+-..|.++|+++||.|-|.
T Consensus 45 v~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 45 VEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred HHHHHHHcCCCCCCEEEEc
Confidence 4455677899999999874
No 283
>KOG1138 consensus Predicted cleavage and polyadenylation specificity factor (CPSF subunit) [RNA processing and modification]
Probab=28.25 E-value=1e+02 Score=31.52 Aligned_cols=70 Identities=16% Similarity=0.201 Sum_probs=46.2
Q ss_pred HHHHHhcCCCCCCEEEEEcCC-chhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccch
Q 008342 59 ASALSKLSIGLGTTVSVIAPN-VPAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFF 128 (569)
Q Consensus 59 a~~L~~~g~~~g~~V~i~~~~-~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 128 (569)
++.+.-.|..+.-.|..--|+ +...+.+=|--+..-++.+|++.++.-+.+..++...+|+++++.+.+.
T Consensus 407 ~h~~e~~g~sp~NsvI~tdpD~~~~~vl~PfrpLamK~i~cpidtrlnfqql~kLlkelqPk~vlcpeayt 477 (653)
T KOG1138|consen 407 VHFLECWGLSPKNSVIFTDPDFSYLLVLAPFRPLAMKIIYCPIDTRLNFQQLPKLLKELQPKIVLCPEAYT 477 (653)
T ss_pred HHHHHHhcCCCCCceEEeCCCCchhhhhcCCccccceeEeccccccccHHHHHHHHHHhCCCEEEChhhhc
Confidence 333433455554455544443 3333444455555677888888899999999999999999999887653
No 284
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=28.24 E-value=6.2e+02 Score=25.39 Aligned_cols=108 Identities=7% Similarity=0.015 Sum_probs=65.7
Q ss_pred ccccCHHHHHHHhhhhCCCceeeeeC--C-------eeeeHHHHHHHHHHHHHHHHhcCCCC--CCEEEEEcCCch--hH
Q 008342 17 YTALTPLWFINRAATLHPTRKSVVYG--S-------KHYTWHQTYRRCRRFASALSKLSIGL--GTTVSVIAPNVP--AM 83 (569)
Q Consensus 17 ~~~~~l~~~l~~~a~~~p~~~a~~~~--~-------~~~Ty~el~~~~~~la~~L~~~g~~~--g~~V~i~~~~~~--~~ 83 (569)
....++.+.++-..+.+-+..++++. + -.+|++.+...+..++..+ ++.+ .+++...+|-.. .+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~~~dr~l~~~Pl~h~~g~ 153 (386)
T TIGR02372 77 LVRRRIGEWVDLIAHHSTPTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKIL---GERPPPVRRVISCVPAHHLYGF 153 (386)
T ss_pred hhhccHHHHHHHHHhcCCCCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHh---CcCCCCCCeEEEeCCcHHHHHH
Confidence 34557777777666666555555442 1 4589999988888777765 4433 457777777542 23
Q ss_pred HHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccchHH
Q 008342 84 YEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSL 130 (569)
Q Consensus 84 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 130 (569)
...++..+..|+.++... ..++..+...++.. .+++..+.....
T Consensus 154 ~~~~l~~l~~G~~vv~~~-~~~~~~~l~~i~~~--t~~~~~P~~l~~ 197 (386)
T TIGR02372 154 LFSCLLPSRRGLEAKQLA-AAPASGIMRHARPG--DLIVGTPFIWEQ 197 (386)
T ss_pred HHHHHHHHHCCCeEEecC-CCChHHHHHhhccC--CEEEECcHHHHH
Confidence 344566677898877664 45555555555432 466666655443
No 285
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=27.77 E-value=4.1e+02 Score=31.82 Aligned_cols=96 Identities=9% Similarity=0.005 Sum_probs=67.3
Q ss_pred CCCceeeeeCC---------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhH-HHHHHHhhhcCceEeeccc
Q 008342 33 HPTRKSVVYGS---------KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAM-YEAQFGAPMAGAVLNSINI 102 (569)
Q Consensus 33 ~p~~~a~~~~~---------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~ 102 (569)
.|+.+|++... -.+|.+.+...+.... ...++.++|++...++-+.+. +.-+++.+..|+..+..++
T Consensus 596 ~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~ 672 (1296)
T PRK10252 596 QPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQ---NHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEP 672 (1296)
T ss_pred CCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHH---HhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECCh
Confidence 46666765431 4578877765544333 345788999999888876554 3346777888998887664
Q ss_pred --cCCHHHHHHHHhcCCceEEEEcccchHHH
Q 008342 103 --RLNATVVAFILSHASSAVVIVDQEFFSLA 131 (569)
Q Consensus 103 --~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 131 (569)
...+..+..++++.++.++...+.....+
T Consensus 673 ~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l 703 (1296)
T PRK10252 673 EAHRDPLAMQQFFAEYGVTTTHFVPSMLAAF 703 (1296)
T ss_pred hccCCHHHHHHHHHHcCCeEEEeCHHHHHHH
Confidence 34678899999999999998877655433
No 286
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=27.70 E-value=4.6e+02 Score=23.73 Aligned_cols=99 Identities=7% Similarity=0.008 Sum_probs=63.8
Q ss_pred eCCeeeeHHHHHHHHHHHHHHHHh-------cC-C-CCCCEEEEEcCCc----hhHHHHHHHhhhcCceEeeccccCCHH
Q 008342 41 YGSKHYTWHQTYRRCRRFASALSK-------LS-I-GLGTTVSVIAPNV----PAMYEAQFGAPMAGAVLNSINIRLNAT 107 (569)
Q Consensus 41 ~~~~~~Ty~el~~~~~~la~~L~~-------~g-~-~~g~~V~i~~~~~----~~~~~~~lA~~~~G~~~v~l~~~~~~~ 107 (569)
+....+|=.|+.-.++.+...|.. .. - +...+|.+-++.. +...++-.-+-..|.-++.+..+.|.+
T Consensus 50 w~~gei~vaqe~~as~~~~~~l~~l~~~l~~~~~~~~~~~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e 129 (213)
T cd02069 50 FGAGKMFLPQVLKSARVMKAAVAYLEPYMEKEKGENSSKGKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIE 129 (213)
T ss_pred HccCCCcHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHH
Confidence 344677777777665555544322 21 1 1233566655553 233455556667899999999999999
Q ss_pred HHHHHHhcCCceEEEEcccch---HHHHHHHHHHh
Q 008342 108 VVAFILSHASSAVVIVDQEFF---SLAEEALKMME 139 (569)
Q Consensus 108 ~l~~~l~~~~~~~vi~~~~~~---~~~~~~~~~~~ 139 (569)
.+...+.+.+|++|..+-... ..+.+..+.+.
T Consensus 130 ~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~ 164 (213)
T cd02069 130 KILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMN 164 (213)
T ss_pred HHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHH
Confidence 999999999999999875533 33444444443
No 287
>PRK06060 acyl-CoA synthetase; Validated
Probab=26.92 E-value=3.5e+02 Score=29.74 Aligned_cols=81 Identities=12% Similarity=-0.019 Sum_probs=54.0
Q ss_pred eecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEee
Q 008342 214 VVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFCA 289 (569)
Q Consensus 214 ~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~ 289 (569)
.+|+..+......... ..++.+++++...++-+..+ +...+.++..|+..+.+ +.....++...+++.++..++.
T Consensus 30 ~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~-~~~~la~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~ 108 (705)
T PRK06060 30 VVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDL-VQLLLACLARGVMAFLANPELHRDDHALAARNTEPALVVT 108 (705)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEEEE
Confidence 3788887666555444 45789999999888764333 23344444555555555 3456788888899999999887
Q ss_pred hHHHHH
Q 008342 290 APVVLN 295 (569)
Q Consensus 290 ~P~~~~ 295 (569)
......
T Consensus 109 ~~~~~~ 114 (705)
T PRK06060 109 SDALRD 114 (705)
T ss_pred chHHhh
Confidence 665443
No 288
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=26.53 E-value=1e+02 Score=29.36 Aligned_cols=53 Identities=4% Similarity=0.045 Sum_probs=42.5
Q ss_pred eeeeHHHHHHH-----HHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCce
Q 008342 44 KHYTWHQTYRR-----CRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAV 96 (569)
Q Consensus 44 ~~~Ty~el~~~-----~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 96 (569)
..+.|.++... ...+...|.+.|+.+++.|.++|.++...-.+++++-.+|..
T Consensus 200 ~~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 200 LNVPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred CCCCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 35777777632 456667777889999999999999999998888888888875
No 289
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=26.47 E-value=1.5e+02 Score=32.37 Aligned_cols=63 Identities=16% Similarity=0.074 Sum_probs=44.3
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccC---------C-----HHHHHHHHhcC-Cce----EEEEcccc
Q 008342 67 IGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRL---------N-----ATVVAFILSHA-SSA----VVIVDQEF 127 (569)
Q Consensus 67 ~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~---------~-----~~~l~~~l~~~-~~~----~vi~~~~~ 127 (569)
+++||.|+ +-.||--.+.. |+...|+.++.+.|.. + .+.+...|+.. +++ ++|+++.+
T Consensus 232 ~~~Gd~VL-vdRN~HKSv~h--aLilsga~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY 308 (714)
T PRK15400 232 APAGSTVL-IDRNCHKSLTH--LMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY 308 (714)
T ss_pred cCCCCEEE-eecccHHHHHH--HHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCC
Confidence 57899776 46666666544 9999999999998764 3 57777777654 233 77777776
Q ss_pred hHHHH
Q 008342 128 FSLAE 132 (569)
Q Consensus 128 ~~~~~ 132 (569)
.....
T Consensus 309 dG~~y 313 (714)
T PRK15400 309 DGLLY 313 (714)
T ss_pred ccEec
Confidence 55443
No 290
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=26.45 E-value=2.8e+02 Score=28.46 Aligned_cols=55 Identities=13% Similarity=0.206 Sum_probs=32.0
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeecccc-----CCHHHHHHHHhcCCceEEEEc
Q 008342 66 SIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIR-----LNATVVAFILSHASSAVVIVD 124 (569)
Q Consensus 66 g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~~ 124 (569)
++++||.|.+-.+.. .....++...|+.+++++.+ .+.+.+...+.. +.++|++.
T Consensus 107 ~~~pGd~VIv~~~t~---~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 107 ALKPGDEVITVAAGF---PTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred CCCCCCEEEECCCCc---HHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 678888877655443 33344555667776665442 345666666643 45666654
No 291
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=26.31 E-value=3.9e+02 Score=27.53 Aligned_cols=89 Identities=9% Similarity=-0.115 Sum_probs=55.4
Q ss_pred CceeeeeCCee--eeHHHHHHHHHHHHHHHHhcCC-CCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHH
Q 008342 35 TRKSVVYGSKH--YTWHQTYRRCRRFASALSKLSI-GLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAF 111 (569)
Q Consensus 35 ~~~a~~~~~~~--~Ty~el~~~~~~la~~L~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 111 (569)
.++.+-.++.+ -|++. +-....+...+ +.|. .+|+.|.-. ..+-.-..+.++|.+.|..+..+-|...+..-..
T Consensus 26 ~~i~~K~E~~nptGS~K~-R~a~~~l~~a~-~~g~~~~g~~vv~~-ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~ 102 (454)
T TIGR01137 26 CELLAKCEFFNPGGSVKD-RIALRMIEDAE-ASGRLKPGDTIIEP-TSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVD 102 (454)
T ss_pred ceEEEEEhhcCCCcchHH-HHHHHHHHHHH-HcCCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHH
Confidence 35676666533 33332 22223333333 4454 677776554 4455666677788889987776666545556677
Q ss_pred HHhcCCceEEEEccc
Q 008342 112 ILSHASSAVVIVDQE 126 (569)
Q Consensus 112 ~l~~~~~~~vi~~~~ 126 (569)
.++.++++++++...
T Consensus 103 ~~~~~GA~v~~~~~~ 117 (454)
T TIGR01137 103 VLKALGAEIVRTPTA 117 (454)
T ss_pred HHHHCCCEEEEcCCc
Confidence 889999999998753
No 292
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=26.26 E-value=5.8e+02 Score=24.37 Aligned_cols=90 Identities=9% Similarity=-0.007 Sum_probs=55.0
Q ss_pred CceeeeeCCeeeeHH-HHHHHHHHHHHHHHhcC-CCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHH
Q 008342 35 TRKSVVYGSKHYTWH-QTYRRCRRFASALSKLS-IGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFI 112 (569)
Q Consensus 35 ~~~a~~~~~~~~Ty~-el~~~~~~la~~L~~~g-~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 112 (569)
.++.+-.++.+-|-. ..+.....+.. ..+.| +.+|+.|.. ...+-.-..+.++|.+.|..+..+-|......-...
T Consensus 23 ~~i~~K~E~~nptGS~K~R~a~~~v~~-a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~ 100 (290)
T TIGR01138 23 SEVWLKLEGNNPAGSVKDRPALSMIVE-AEKRGEIKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAA 100 (290)
T ss_pred CeEEEEEccCCCCccHHHHHHHHHHHH-HHHcCCCCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHH
Confidence 456666665333321 12222233333 33445 367776655 444455566667788899877766666555666778
Q ss_pred HhcCCceEEEEccc
Q 008342 113 LSHASSAVVIVDQE 126 (569)
Q Consensus 113 l~~~~~~~vi~~~~ 126 (569)
++..++++++++..
T Consensus 101 ~~~~GA~v~~v~~~ 114 (290)
T TIGR01138 101 MRAYGAELILVTKE 114 (290)
T ss_pred HHHcCCEEEEeCCC
Confidence 99999999998763
No 293
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=26.14 E-value=1.4e+02 Score=23.61 Aligned_cols=41 Identities=12% Similarity=0.075 Sum_probs=31.9
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCce
Q 008342 56 RRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAV 96 (569)
Q Consensus 56 ~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 96 (569)
..+...+...++.+++.|.+++.++.....+...+...|..
T Consensus 64 ~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~~ 104 (118)
T cd01449 64 EELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGYK 104 (118)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 45666777888888999999998877777777777777863
No 294
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=25.95 E-value=2.9e+02 Score=29.29 Aligned_cols=80 Identities=11% Similarity=-0.043 Sum_probs=53.4
Q ss_pred eeecchHHHHHHHHhHhHh----CCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEE
Q 008342 213 VVVSHRGAYLMSLNGALIW----GMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHF 287 (569)
Q Consensus 213 v~~t~~~~~~~~~~~~~~~----~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l 287 (569)
..+|...+..........+ ++.++|++...++-...+ ....++++..|...+.+ +.....++...+++.++..+
T Consensus 48 ~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~-~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~ 126 (562)
T PRK12492 48 VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQY-PIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARAL 126 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEE
Confidence 3678888766665555433 788999999887654322 23344444455544444 44677899999999999998
Q ss_pred eehHHH
Q 008342 288 CAAPVV 293 (569)
Q Consensus 288 ~~~P~~ 293 (569)
+..+.+
T Consensus 127 i~~~~~ 132 (562)
T PRK12492 127 VYLNMF 132 (562)
T ss_pred Eecccc
Confidence 876543
No 295
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=25.76 E-value=6e+02 Score=26.08 Aligned_cols=32 Identities=16% Similarity=0.169 Sum_probs=14.2
Q ss_pred hhcCceEeeccccCCHHHHHHHHhcCCceEEEE
Q 008342 91 PMAGAVLNSINIRLNATVVAFILSHASSAVVIV 123 (569)
Q Consensus 91 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 123 (569)
.+.|+.+..++...+.+.+...++. +.++|++
T Consensus 122 ~~~Gi~v~~vd~~~d~~~l~~~I~~-~Tk~I~~ 153 (432)
T PRK06702 122 RKLGIDVTFFNPNLTADEIVALAND-KTKLVYA 153 (432)
T ss_pred HHCCCEEEEECCCCCHHHHHHhCCc-CCeEEEE
Confidence 3445554444444444444444432 3344443
No 296
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=25.60 E-value=68 Score=22.98 Aligned_cols=23 Identities=26% Similarity=0.212 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHhcCCCCCCEEEE
Q 008342 53 RRCRRFASALSKLSIGLGTTVSV 75 (569)
Q Consensus 53 ~~~~~la~~L~~~g~~~g~~V~i 75 (569)
-+..-+-..|.++|++.||.|-|
T Consensus 40 L~~~Gv~~~L~~~G~~~GD~V~I 62 (69)
T PF09269_consen 40 LKKMGVEKALRKAGAKEGDTVRI 62 (69)
T ss_dssp HHHTTHHHHHHTTT--TT-EEEE
T ss_pred HHHCCHHHHHHHcCCCCCCEEEE
Confidence 33444556678889999999976
No 297
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=25.56 E-value=4.2e+02 Score=29.17 Aligned_cols=86 Identities=7% Similarity=0.015 Sum_probs=60.0
Q ss_pred cceeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHH-HHHHHHHhcceEEEe-ccCChHHHHHHHHhcCcc
Q 008342 211 KGVVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWS-YTWSLAALCGTSICL-RQVTAKAVYTAIATHGVT 285 (569)
Q Consensus 211 k~v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~-~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t 285 (569)
....+|++.+...+..... ..|++++|++...++-. .-+. ..++++..|+..+.+ ....++++...+++.++.
T Consensus 118 ~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~--~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~ 195 (700)
T PTZ00216 118 ETRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETR--WEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECK 195 (700)
T ss_pred CceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCC--HHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCcc
Confidence 3567888887776655544 45899999998888754 2333 334444556555554 557788999999999999
Q ss_pred EEeehHHHHHHHH
Q 008342 286 HFCAAPVVLNAIA 298 (569)
Q Consensus 286 ~l~~~P~~~~~l~ 298 (569)
.++.....+..+.
T Consensus 196 ~lv~~~~~~~~l~ 208 (700)
T PTZ00216 196 AIVCNGKNVPNLL 208 (700)
T ss_pred EEEECHHHHHHHH
Confidence 9998776665554
No 298
>PRK07867 acyl-CoA synthetase; Validated
Probab=25.55 E-value=4.9e+02 Score=27.32 Aligned_cols=83 Identities=12% Similarity=-0.132 Sum_probs=55.9
Q ss_pred eecchHHHHHHHHhHhHh----CCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEe
Q 008342 214 VVSHRGAYLMSLNGALIW----GMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFC 288 (569)
Q Consensus 214 ~~t~~~~~~~~~~~~~~~----~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~ 288 (569)
.+|+..+..........+ +..+++++...++-.. -.....+++...|...+.+ +...++++...+++.++..++
T Consensus 28 ~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li 106 (529)
T PRK07867 28 FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTP-EFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLVL 106 (529)
T ss_pred EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCH-HHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEE
Confidence 478888766665544433 5677888877776432 2233444555566666655 456788999999999999999
Q ss_pred ehHHHHHHH
Q 008342 289 AAPVVLNAI 297 (569)
Q Consensus 289 ~~P~~~~~l 297 (569)
........+
T Consensus 107 ~~~~~~~~~ 115 (529)
T PRK07867 107 TESAHAELL 115 (529)
T ss_pred ECHhHHHHH
Confidence 988766543
No 299
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=25.48 E-value=3.5e+02 Score=21.50 Aligned_cols=56 Identities=7% Similarity=0.068 Sum_probs=40.1
Q ss_pred HHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEccc---chHHHHHHHHHHh
Q 008342 84 YEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQE---FFSLAEEALKMME 139 (569)
Q Consensus 84 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~---~~~~~~~~~~~~~ 139 (569)
......+-..|..++.+.+..+.+++...+.+.+|++|..+-. ......+..+.+.
T Consensus 17 ~~~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~ 75 (119)
T cd02067 17 NIVARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELK 75 (119)
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHH
Confidence 3333445557999899999999999999999999999987654 3334444444443
No 300
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=25.28 E-value=5.7e+02 Score=30.11 Aligned_cols=94 Identities=9% Similarity=0.117 Sum_probs=64.8
Q ss_pred CCCceeeeeCC---------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCch--hHHHHHHHhhhcCceEeecc
Q 008342 33 HPTRKSVVYGS---------KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVP--AMYEAQFGAPMAGAVLNSIN 101 (569)
Q Consensus 33 ~p~~~a~~~~~---------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~ 101 (569)
.++.++++... -.+|.+.+...+...... .+++++|++...+|-.. .+...++..+..|...+..+
T Consensus 791 ~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~ 867 (1140)
T PRK06814 791 DPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAAR---IDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYP 867 (1140)
T ss_pred CCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHh---hCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEec
Confidence 45666665421 358888887776666544 36788999988877532 33345667777898877766
Q ss_pred ccCCHHHHHHHHhcCCceEEEEcccchH
Q 008342 102 IRLNATVVAFILSHASSAVVIVDQEFFS 129 (569)
Q Consensus 102 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 129 (569)
.......+...+++.++.++...+....
T Consensus 868 ~~~~~~~~~~~i~~~~~t~~~~~p~~l~ 895 (1140)
T PRK06814 868 SPLHYRIIPELIYDTNATILFGTDTFLN 895 (1140)
T ss_pred CcccHHHHHHHHHhcCCEEEEecHHHHH
Confidence 5555667788899999999888765543
No 301
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=25.25 E-value=7.3e+02 Score=25.19 Aligned_cols=59 Identities=17% Similarity=-0.027 Sum_probs=47.7
Q ss_pred CCCEEEEEcCCchhHHHHHHHhhhcCceEeec--cccCCHHHHHHHHhcCCceEEEEcccc
Q 008342 69 LGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSI--NIRLNATVVAFILSHASSAVVIVDQEF 127 (569)
Q Consensus 69 ~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l--~~~~~~~~l~~~l~~~~~~~vi~~~~~ 127 (569)
+|-+|+.+++=.++..+.+..+...|+-+... ||-...+.....|...+..++-...+.
T Consensus 31 ~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a~~~~~ 91 (406)
T TIGR00936 31 KGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFAWRGET 91 (406)
T ss_pred CCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEEecCCC
Confidence 48899999999999999999999999976655 777678888888988888866544443
No 302
>PF06564 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ protein is encoded immediately upstream of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae, and in several species is clearly part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm [], based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=25.11 E-value=2.6e+02 Score=26.01 Aligned_cols=80 Identities=19% Similarity=0.116 Sum_probs=55.9
Q ss_pred HHHHhhhhCCCceeeeeCC-----eeeeHHHHHHHHHHHHHHHHhcC-CCCCCEEEEEcCCchhHHHHHHHhhhcCceEe
Q 008342 25 FINRAATLHPTRKSVVYGS-----KHYTWHQTYRRCRRFASALSKLS-IGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLN 98 (569)
Q Consensus 25 ~l~~~a~~~p~~~a~~~~~-----~~~Ty~el~~~~~~la~~L~~~g-~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (569)
-+...+-++++.+.+.-.+ ++..+.++.+.-..+++.|.+.. ..+.+.|.+-+|..+.-+ .--++..+..+.+
T Consensus 67 ~W~~~~~~~~~g~~~LPfG~l~~~~~~~~~~l~~~~~~l~~~l~~l~~~~~~~~iliD~P~g~~~~-~~~al~~aD~vL~ 145 (243)
T PF06564_consen 67 DWQQAAYRYSDGVDFLPFGQLTEAEREAFEQLAQDPQWLARALAALKALGPYDWILIDTPPGPSPY-TRQALAAADLVLV 145 (243)
T ss_pred CHHHHhhccCCCCEEEcCCCCCHHHHHHHHHhhcCHHHHHHHHHHHhccCCCCEEEEeCCCCCcHH-HHHHHHhCCeEEE
Confidence 3456667788888877654 45666667777888888888877 567788999888865333 3335566667777
Q ss_pred eccccCC
Q 008342 99 SINIRLN 105 (569)
Q Consensus 99 ~l~~~~~ 105 (569)
.+.|+..
T Consensus 146 V~~~Da~ 152 (243)
T PF06564_consen 146 VVNPDAA 152 (243)
T ss_pred EeCCCHH
Confidence 7777644
No 303
>PLN02356 phosphateglycerate kinase
Probab=25.04 E-value=4.5e+02 Score=26.81 Aligned_cols=64 Identities=16% Similarity=-0.024 Sum_probs=42.9
Q ss_pred HHHhcCC-CCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcc
Q 008342 61 ALSKLSI-GLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQ 125 (569)
Q Consensus 61 ~L~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 125 (569)
.+.+.|. ++|..|+- ....-.-+.+.++|...|..++.+-|...+..-..+++.+++++++++.
T Consensus 94 ~a~~~g~~~~~g~Vve-aSSGN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~~ir~~GAeVi~v~~ 158 (423)
T PLN02356 94 EALESGQLFPGGVVTE-GSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVRP 158 (423)
T ss_pred HHHhCCccCCCCEEEE-eCCHHHHHHHHHHHHHcCCcEEEEECCCCcHHHHHHHHHcCCEEEEECC
Confidence 3444443 46766653 3333446677788888998776666665555557899999999999853
No 304
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=24.86 E-value=2e+02 Score=30.31 Aligned_cols=86 Identities=14% Similarity=0.188 Sum_probs=58.2
Q ss_pred eeeeHHHHHHHHHHHHHHHH-hcCCCCCCEEEEEcCCchh-HHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEE
Q 008342 44 KHYTWHQTYRRCRRFASALS-KLSIGLGTTVSVIAPNVPA-MYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVV 121 (569)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~-~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 121 (569)
-.+|...+.... .+..+. ..++.++|++...+|-... .....++++..|+.++...+......+..++++.++..+
T Consensus 194 v~~s~~~~~~~~--~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~ 271 (539)
T PRK07008 194 ALYSHRSTVLHA--YGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFS 271 (539)
T ss_pred EEEecHHHHHHH--HHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEE
Confidence 346766654322 222222 3577889998877765322 233346778899988877777888999999999999998
Q ss_pred EEcccchHHH
Q 008342 122 IVDQEFFSLA 131 (569)
Q Consensus 122 i~~~~~~~~~ 131 (569)
...+.....+
T Consensus 272 ~~~P~~~~~l 281 (539)
T PRK07008 272 AGVPTVWLGL 281 (539)
T ss_pred EechHHHHHH
Confidence 8777655433
No 305
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=24.81 E-value=3.3e+02 Score=26.45 Aligned_cols=91 Identities=13% Similarity=-0.068 Sum_probs=52.7
Q ss_pred CceeeeeCC--eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHH
Q 008342 35 TRKSVVYGS--KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFI 112 (569)
Q Consensus 35 ~~~a~~~~~--~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 112 (569)
.++.+-.++ ..=||++ +.+..+...+.+.| ++.|.... .+-.-..+.++|...|..+..+-|......-...
T Consensus 38 ~~i~~K~E~~nptGS~K~--R~a~~~l~~a~~~g---~~~vv~~S-sGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~ 111 (324)
T cd01563 38 KNLYVKDEGLNPTGSFKD--RGMTVAVSKAKELG---VKAVACAS-TGNTSASLAAYAARAGIKCVVFLPAGKALGKLAQ 111 (324)
T ss_pred CceEEEecCCCCcccHHH--hhHHHHHHHHHHcC---CCEEEEeC-CCHHHHHHHHHHHHcCCceEEEEeCCCCHHHHHH
Confidence 456666655 3333332 22333333333444 44554442 3334444557888889876666555455666788
Q ss_pred HhcCCceEEEEcccchHHH
Q 008342 113 LSHASSAVVIVDQEFFSLA 131 (569)
Q Consensus 113 l~~~~~~~vi~~~~~~~~~ 131 (569)
++..++++++++.......
T Consensus 112 l~~~GA~Vi~~~~~~~~~~ 130 (324)
T cd01563 112 ALAYGATVLAVEGNFDDAL 130 (324)
T ss_pred HHHcCCEEEEECCcHHHHH
Confidence 9999999999987644433
No 306
>PRK08526 threonine dehydratase; Provisional
Probab=24.74 E-value=3.2e+02 Score=27.67 Aligned_cols=98 Identities=8% Similarity=-0.032 Sum_probs=56.8
Q ss_pred CCceeeeeCCe--eeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHH
Q 008342 34 PTRKSVVYGSK--HYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAF 111 (569)
Q Consensus 34 p~~~a~~~~~~--~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 111 (569)
.-++.+-.++. +-||++ +-..+++.....+ +..+| .|. ...+-....+.++|.+.|..+..+-|...+..-..
T Consensus 34 g~~iylK~E~lqptGSfK~-RgA~n~i~~l~~~-~~~~g-VV~--aSaGNhg~avA~aa~~~Gi~~~IvmP~~~p~~k~~ 108 (403)
T PRK08526 34 GAEVYLKKENLQITGAYKI-RGAYNKIANLSEE-QKQHG-VIA--ASAGNHAQGVAISAKKFGIKAVIVMPEATPLLKVS 108 (403)
T ss_pred CCeEEEEecCCCCCCCCHH-HHHHHHHHhccHh-hcCCE-EEE--ECccHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHH
Confidence 34677777764 334332 2223333332222 22223 333 44445566777888899987766666555545556
Q ss_pred HHhcCCceEEEEcccchHHHHHHHH
Q 008342 112 ILSHASSAVVIVDQEFFSLAEEALK 136 (569)
Q Consensus 112 ~l~~~~~~~vi~~~~~~~~~~~~~~ 136 (569)
.++.++++++++.....+....+.+
T Consensus 109 ~~r~~GA~Vv~~g~~~~~a~~~a~~ 133 (403)
T PRK08526 109 GTKALGAEVILKGDNYDEAYAFALE 133 (403)
T ss_pred HHHhCCCEEEEECCCHHHHHHHHHH
Confidence 7899999999998765554444443
No 307
>PRK13390 acyl-CoA synthetase; Provisional
Probab=24.63 E-value=7.3e+02 Score=25.67 Aligned_cols=78 Identities=17% Similarity=0.023 Sum_probs=53.2
Q ss_pred eecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEee
Q 008342 214 VVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFCA 289 (569)
Q Consensus 214 ~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~ 289 (569)
.+|...+......... ..++.++|++....+-+..+ +...+++...|+..+.+ +...+.++...+++.+++.+..
T Consensus 24 ~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~-~~~~la~~~~Ga~~~~l~~~~~~~~~~~~~~~~~~~~~i~ 102 (501)
T PRK13390 24 QVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEA-LVVLWAALRSGLYITAINHHLTAPEADYIVGDSGARVLVA 102 (501)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH-HHHHHHHHHhCCEEeccccCCCHHHHHHHHHhcCCcEEEE
Confidence 5888888666655544 45788999998887754322 23344455556655555 4567788889999999888877
Q ss_pred hHH
Q 008342 290 APV 292 (569)
Q Consensus 290 ~P~ 292 (569)
...
T Consensus 103 ~~~ 105 (501)
T PRK13390 103 SAA 105 (501)
T ss_pred cch
Confidence 544
No 308
>TIGR02035 D_Ser_am_lyase D-serine ammonia-lyase. This family consists of D-serine ammonia-lyase (EC 4.3.1.18), a pyridoxal-phosphate enzyme that converts D-serine to pyruvate and NH3. This enzyme is also called D-serine dehydratase and D-serine deaminase and was previously designated EC 4.2.1.14. It is homologous to an enzyme that acts on threonine and may itself act weakly on threonine.
Probab=24.39 E-value=4.9e+02 Score=26.66 Aligned_cols=62 Identities=11% Similarity=-0.053 Sum_probs=43.4
Q ss_pred EEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHH
Q 008342 75 VIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALK 136 (569)
Q Consensus 75 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~ 136 (569)
+.....-.-..+.++|...|..+..+=|...+..-...++.++++++++..++......+.+
T Consensus 156 v~aSsGN~G~slA~~Aa~lG~~~~IvmP~~a~~~K~~~ir~~GAeVv~~~~~~~~a~~~A~~ 217 (431)
T TIGR02035 156 AVGSTGNLGLSIGIISAALGFQVTVHMSADAKQWKKDKLRSKGVTVVEYESDYGVAVEEGRK 217 (431)
T ss_pred EEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCHHHHHHHHHH
Confidence 34444455566677788888876666666566667888999999999999876555444433
No 309
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=24.14 E-value=5.2e+02 Score=27.88 Aligned_cols=96 Identities=9% Similarity=0.004 Sum_probs=61.5
Q ss_pred cCceEEEEeccCCCCCCcceeecchHHHHHHHH---hHhHhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-cc
Q 008342 194 EWQSIALGYTSGTTASPKGVVVSHRGAYLMSLN---GALIWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQ 269 (569)
Q Consensus 194 ~~~~~~i~~TSGsTG~pk~v~~t~~~~~~~~~~---~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~ 269 (569)
.+.++.+.---++.+.+- +|...++..... .....++.++|++...+|+.--. +...+++...|...... ..
T Consensus 79 ~~~~a~~~~~~~~~~~~~---~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~-~ia~lA~~r~Gai~~~v~~~ 154 (626)
T KOG1175|consen 79 GDKVAIIFEGNEGGDTEV---WTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEA-VIAMLACARIGAIHSSVFAG 154 (626)
T ss_pred CCCcEEEEEecCCCceEE---EEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHH-HHHHHHHhhcCeEEEEeecc
Confidence 345566666555555544 566665444333 23366899999999999985432 33444444445443333 67
Q ss_pred CChHHHHHHHHhcCccEEeehHHH
Q 008342 270 VTAKAVYTAIATHGVTHFCAAPVV 293 (569)
Q Consensus 270 ~~~~~~~~~i~~~~~t~l~~~P~~ 293 (569)
|.+.++...++.-++..++..-..
T Consensus 155 fs~~~l~~Rl~~~~~k~i~t~d~~ 178 (626)
T KOG1175|consen 155 FSAKELLDRLQDSKAKVIITQDVV 178 (626)
T ss_pred CCHHHHHHHHHhcCCCEEEEEeee
Confidence 999999999999998888765443
No 310
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=24.02 E-value=5e+02 Score=26.17 Aligned_cols=92 Identities=15% Similarity=0.075 Sum_probs=59.0
Q ss_pred HHHHHHhhhhCCCceeeeeCCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccc
Q 008342 23 LWFINRAATLHPTRKSVVYGSKHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINI 102 (569)
Q Consensus 23 ~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~ 102 (569)
++.+-.+++.--+.+.+....+.+-+-||.+...+.-..+...-+.+.+-|.+-..-...++.+++|....|-.++.+.|
T Consensus 46 P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP 125 (420)
T KOG0257|consen 46 PKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVFEP 125 (420)
T ss_pred cHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcCCCCEEEEecC
Confidence 34444444443344444444455666677766555444444444566667888777777788899999999999999999
Q ss_pred cCCHHHHHHHHh
Q 008342 103 RLNATVVAFILS 114 (569)
Q Consensus 103 ~~~~~~l~~~l~ 114 (569)
-+..-.-...+.
T Consensus 126 ~fd~Y~~~~~ma 137 (420)
T KOG0257|consen 126 FFDCYIPQVVMA 137 (420)
T ss_pred cchhhhhHHhhc
Confidence 887655444443
No 311
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=23.87 E-value=3.6e+02 Score=28.41 Aligned_cols=84 Identities=6% Similarity=-0.109 Sum_probs=55.6
Q ss_pred eeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEe
Q 008342 213 VVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFC 288 (569)
Q Consensus 213 v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~ 288 (569)
..+|...+......... ..++.++|++...++-...+- ...+.+...|+..+.+ +....+++...++..++..++
T Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~-~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~ 116 (542)
T PRK06018 38 VRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHL-EAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVI 116 (542)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHH-HHHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEEE
Confidence 35788887666655554 358899999988877543332 2333444455555555 456788999999999999998
Q ss_pred ehHHHHHHH
Q 008342 289 AAPVVLNAI 297 (569)
Q Consensus 289 ~~P~~~~~l 297 (569)
........+
T Consensus 117 ~~~~~~~~~ 125 (542)
T PRK06018 117 TDLTFVPIL 125 (542)
T ss_pred EccccHHHH
Confidence 766544333
No 312
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=23.61 E-value=3.4e+02 Score=28.78 Aligned_cols=81 Identities=11% Similarity=-0.011 Sum_probs=55.1
Q ss_pred eecchHHHHHHHHhHhH---hCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEee
Q 008342 214 VVSHRGAYLMSLNGALI---WGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFCA 289 (569)
Q Consensus 214 ~~t~~~~~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~ 289 (569)
.+|...+...+...... .++..+|++...++-...+ +...++++..|+..+.+ +.....++...+++.+++.++.
T Consensus 49 ~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~ 127 (563)
T PRK06710 49 DITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQA-VIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILC 127 (563)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEE
Confidence 47888776666554443 4788999999888764433 33444555556555555 4567788999999999999988
Q ss_pred hHHHHH
Q 008342 290 APVVLN 295 (569)
Q Consensus 290 ~P~~~~ 295 (569)
.+....
T Consensus 128 ~~~~~~ 133 (563)
T PRK06710 128 LDLVFP 133 (563)
T ss_pred eccchh
Confidence 765433
No 313
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form. A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.
Probab=23.56 E-value=5.6e+02 Score=25.62 Aligned_cols=94 Identities=9% Similarity=-0.040 Sum_probs=56.1
Q ss_pred CCCceeeeeCCe--eeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHH
Q 008342 33 HPTRKSVVYGSK--HYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVA 110 (569)
Q Consensus 33 ~p~~~a~~~~~~--~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~ 110 (569)
...++.+-.++. +=||++ +-....+.. +.+.+..+ . .+....+-....+.++|.+.|..+..+-|...+..-.
T Consensus 13 ~g~~i~~K~E~~~ptgS~K~-R~a~~~i~~-~~~~~~~~--~-vv~aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~ 87 (380)
T TIGR01127 13 TGSEVYLKLENLQKTGSFKI-RGALNKIAN-LSEDQRQR--G-VVAASAGNHAQGVAYAAKKFGIKAVIVMPESAPPSKV 87 (380)
T ss_pred hCCeEEEEecCCCCCCCcHH-HHHHHHHHh-cchhccCC--E-EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCcHHHH
Confidence 344677766653 444443 222223322 33333322 2 3333444555667778889998777776766666678
Q ss_pred HHHhcCCceEEEEcccchHHH
Q 008342 111 FILSHASSAVVIVDQEFFSLA 131 (569)
Q Consensus 111 ~~l~~~~~~~vi~~~~~~~~~ 131 (569)
..++.++++++++.....+..
T Consensus 88 ~~~~~~GA~V~~~~~~~~~a~ 108 (380)
T TIGR01127 88 KATKSYGAEVILHGDDYDEAY 108 (380)
T ss_pred HHHHHCCCEEEEECCCHHHHH
Confidence 889999999999876544433
No 314
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=23.17 E-value=4.7e+02 Score=25.08 Aligned_cols=59 Identities=10% Similarity=0.035 Sum_probs=40.1
Q ss_pred CEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccchHH
Q 008342 71 TTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSL 130 (569)
Q Consensus 71 ~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 130 (569)
+.|... ..+-.-..+.++|...|..++.+-|..........++..++++++++.+....
T Consensus 66 ~~iv~~-ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~~~~~~ 124 (304)
T cd01562 66 KGVVAA-SAGNHAQGVAYAAKLLGIPATIVMPETAPAAKVDATRAYGAEVVLYGEDFDEA 124 (304)
T ss_pred CcEEEE-CCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCCHHHH
Confidence 344443 34555566667777888866666565555566788999999999998864443
No 315
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=23.09 E-value=4.9e+02 Score=24.83 Aligned_cols=87 Identities=13% Similarity=0.162 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHH---HHHHHHhcCCceEEEEc
Q 008342 48 WHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNAT---VVAFILSHASSAVVIVD 124 (569)
Q Consensus 48 y~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~---~l~~~l~~~~~~~vi~~ 124 (569)
+.++.++...+-.++.+.--....+..+...+...++.-.|++-..+..-.--....++. ++...+++.+.++||++
T Consensus 156 ~~~~~~~L~~l~~~~~~~~~~~~~~~~v~~H~af~Yl~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e 235 (286)
T cd01019 156 LEAFNARLAELDATIKERLAPVKTKPFFVFHDAYGYFEKRYGLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFAE 235 (286)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCeEEEecccHHHHHHHcCCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCcEEEec
Confidence 444555555555555442111234566667778888877777655443211112233444 45556678899999998
Q ss_pred ccchHHHHHH
Q 008342 125 QEFFSLAEEA 134 (569)
Q Consensus 125 ~~~~~~~~~~ 134 (569)
........+.
T Consensus 236 ~~~~~~~~~~ 245 (286)
T cd01019 236 PQFHPKIAET 245 (286)
T ss_pred CCCChHHHHH
Confidence 8865554443
No 316
>COG0379 NadA Quinolinate synthase [Coenzyme metabolism]
Probab=23.02 E-value=2.8e+02 Score=26.72 Aligned_cols=103 Identities=15% Similarity=0.090 Sum_probs=62.7
Q ss_pred ccCHHHHHHHhhhhCCCceeeeeCCeeeeHHHHHH---------HHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHH
Q 008342 19 ALTPLWFINRAATLHPTRKSVVYGSKHYTWHQTYR---------RCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFG 89 (569)
Q Consensus 19 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~---------~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA 89 (569)
++--.+-+...-++||+.+.+.|-|.+ +++.. ++.++-.++ ..+++|.+.=..+...+++
T Consensus 107 ~~~~~~~~~~~~~~~P~~~vV~YvNts---A~vKA~~Di~cTSsNAvkvVe~~-----~~~~~Iif~PD~~Lg~yva--- 175 (324)
T COG0379 107 DMITAEEVRAFKEKHPDAPVVTYVNTS---AEVKAEADICCTSSNAVKVVESA-----LDGDKILFLPDKNLGRYVA--- 175 (324)
T ss_pred cCCCHHHHHHHHHHCCCCceEEEeeCh---HHHHhhcCeEEecchHHHHHHhc-----cCCCcEEEcCcHHHHHHHH---
Confidence 444556777778899999999887722 22222 233333333 2366665543333433332
Q ss_pred hhhcCc-------eEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHH
Q 008342 90 APMAGA-------VLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEE 133 (569)
Q Consensus 90 ~~~~G~-------~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 133 (569)
-..|. -.++++..++.+.+..+-+...--.|++.+++...+.+
T Consensus 176 -~~tg~k~ii~w~G~C~VH~~ft~~~i~~~k~~~Pda~vlvHPEC~~~Vv~ 225 (324)
T COG0379 176 -KQTGAKKIILWPGHCIVHEEFTAEDIEELKEKYPDAEVLVHPECPPEVVE 225 (324)
T ss_pred -HHcCCCcEEEECCccchhhhcCHHHHHHHHHHCCCCEEEECCCCCHHHHH
Confidence 22322 13456777888998888888877778888888765554
No 317
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=22.93 E-value=1.9e+02 Score=23.04 Aligned_cols=46 Identities=11% Similarity=-0.014 Sum_probs=33.2
Q ss_pred cchhhHHHHHHHHHhcceEEEe--ccCChHHHHHHHHhcCccEEeehH
Q 008342 246 FHGNGWSYTWSLAALCGTSICL--RQVTAKAVYTAIATHGVTHFCAAP 291 (569)
Q Consensus 246 ~~~~g~~~~~~~~~~g~~~~~~--~~~~~~~~~~~i~~~~~t~l~~~P 291 (569)
.|..|..+.-..+-..|--+.. ....++++.+.+.+.+++++..+.
T Consensus 11 ~H~lG~~~~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~ 58 (119)
T cd02067 11 GHDIGKNIVARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSG 58 (119)
T ss_pred hhhHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEec
Confidence 6888887666555555555444 346778999999999999887654
No 318
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=22.64 E-value=6.1e+02 Score=26.53 Aligned_cols=88 Identities=13% Similarity=0.041 Sum_probs=58.3
Q ss_pred CCCceeeeeCC---------eeeeHHHHHHHHHHHHHHHHhcCCC-CCCEEEEEcCCchh-HHHHHHHhhhcCceEeecc
Q 008342 33 HPTRKSVVYGS---------KHYTWHQTYRRCRRFASALSKLSIG-LGTTVSVIAPNVPA-MYEAQFGAPMAGAVLNSIN 101 (569)
Q Consensus 33 ~p~~~a~~~~~---------~~~Ty~el~~~~~~la~~L~~~g~~-~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~ 101 (569)
.++.+|++..- -.+|++.+...+..++.. .++. ++|++...+|-... .+..+++++..|+..+..+
T Consensus 150 ~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~ 226 (525)
T PRK05851 150 DSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNAR---VGLDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAP 226 (525)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHH---hCCCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcC
Confidence 44666665431 458998888776665543 3666 78888887776532 2345677888898877654
Q ss_pred c-cC--CHHHHHHHHhcCCceEEEE
Q 008342 102 I-RL--NATVVAFILSHASSAVVIV 123 (569)
Q Consensus 102 ~-~~--~~~~l~~~l~~~~~~~vi~ 123 (569)
. .+ .+..+..++++.++.++.+
T Consensus 227 ~~~~~~~~~~~~~~i~~~~~t~~~~ 251 (525)
T PRK05851 227 TTAFSASPFRWLSWLSDSRATLTAA 251 (525)
T ss_pred HHHHHHCHHHHHHHHHHhCCeEEeC
Confidence 3 12 4567788889999886644
No 319
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=22.58 E-value=7.1e+02 Score=26.15 Aligned_cols=92 Identities=10% Similarity=-0.014 Sum_probs=59.3
Q ss_pred CCCceeeeeCC---------eeeeHHHHHHHHHHHHHHHHhcCCCCC-CEEEEEcCCc--hhHHHHHHHhhhcCceEeec
Q 008342 33 HPTRKSVVYGS---------KHYTWHQTYRRCRRFASALSKLSIGLG-TTVSVIAPNV--PAMYEAQFGAPMAGAVLNSI 100 (569)
Q Consensus 33 ~p~~~a~~~~~---------~~~Ty~el~~~~~~la~~L~~~g~~~g-~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l 100 (569)
.++.++++... -.+|++.+...+..+.. ..++.++ |++...+|.. ..++..+++.+..|+..+.+
T Consensus 150 ~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 226 (545)
T PRK07768 150 GEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFV---AAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKV 226 (545)
T ss_pred CCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHH---hcCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEe
Confidence 34566665432 45888888765554433 3467666 7887777654 34444556677888887777
Q ss_pred ccc---CCHHHHHHHHhcCCceEEEEcccc
Q 008342 101 NIR---LNATVVAFILSHASSAVVIVDQEF 127 (569)
Q Consensus 101 ~~~---~~~~~l~~~l~~~~~~~vi~~~~~ 127 (569)
.+. ..+.....++++.++.++.+....
T Consensus 227 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 256 (545)
T PRK07768 227 TPMDFLRDPLLWAELISKYRGTMTAAPNFA 256 (545)
T ss_pred CHHHHHHhHHHHHHHHHHhCCEEEECchHH
Confidence 553 245667788999999887654433
No 320
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=22.50 E-value=1.4e+02 Score=22.00 Aligned_cols=40 Identities=23% Similarity=0.062 Sum_probs=32.7
Q ss_pred HHHHHh-cCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEe
Q 008342 59 ASALSK-LSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLN 98 (569)
Q Consensus 59 a~~L~~-~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 98 (569)
..+|.+ .|+++|+.++.+.....+....+=|++++.-+-+
T Consensus 3 GsYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~ 43 (87)
T cd07050 3 GSYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVEL 43 (87)
T ss_pred chhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceee
Confidence 345665 6999999999988888999999999998876543
No 321
>TIGR02544 III_secr_YscJ type III secretion apparatus lipoprotein, YscJ/HrcJ family. All members of this protein family are predicted lipoproteins with a conserved Cys near the N-terminus for cleavage and modification, and are part of known or predicted type III secretion systems. Members are found in both plant and animal pathogens, including the obligately intracellular chlamydial species and (non-pathogenic) root nodule bacteria. The most closely related proteins outside this family are examples of the flagellar M-ring protein FliF.
Probab=21.86 E-value=5.7e+02 Score=22.75 Aligned_cols=76 Identities=16% Similarity=0.231 Sum_probs=47.2
Q ss_pred echHHHHHHHhcCCCceeeEEEee-cCCCC----Ccee--eEEEEecCCcchhhhhhHHHHHHHHHHhcCCCCcCCceEE
Q 008342 463 ISSVEVEKVLYLHPLVLEAAVVAR-PDERW----GESP--CAFVTLKPEADELDKGKLAEDVSKFCRAKMPSYWVPKSVV 535 (569)
Q Consensus 463 v~~~~iE~~l~~~~~v~~~~v~~~-~~~~~----g~~~--~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~ 535 (569)
---.+++..|..+++|.++.|... |.+.. .+.+ .+++.+.++.... .....|...+..-++. .-|..+.
T Consensus 107 ale~EL~rtI~~i~~V~~ArVhl~~P~~~~f~~~~~~~sASV~l~~~~g~~l~---~qv~~I~~LVa~SV~~-L~~enVt 182 (193)
T TIGR02544 107 AIEQRLEQTLSQIDGVISARVHVVLPENDNNGRPKKPSSASVFIKYRPGLNLD---ALIPKIKRLVANSIPG-LDYDNVS 182 (193)
T ss_pred HHHHHHHHHHHhcCCeeeeEEEEECCCCCcccccCCCCcEEEEEEeCCCCCcH---HHHHHHHHHHHHhcCC-CCccceE
Confidence 344689999999999999988543 33311 1222 4455555554321 1567888888877754 3456777
Q ss_pred eccCCCC
Q 008342 536 FAALPKS 542 (569)
Q Consensus 536 ~~~lP~t 542 (569)
++..|..
T Consensus 183 Vv~~~~~ 189 (193)
T TIGR02544 183 VVLVPAE 189 (193)
T ss_pred EEEeccc
Confidence 6665554
No 322
>PRK05939 hypothetical protein; Provisional
Probab=21.83 E-value=3.6e+02 Score=27.26 Aligned_cols=37 Identities=22% Similarity=0.108 Sum_probs=15.4
Q ss_pred HhhhcCceEeeccccCCH-HHHHHHHhcCCceEEEEcc
Q 008342 89 GAPMAGAVLNSINIRLNA-TVVAFILSHASSAVVIVDQ 125 (569)
Q Consensus 89 A~~~~G~~~v~l~~~~~~-~~l~~~l~~~~~~~vi~~~ 125 (569)
+++..|-.++..++.++. ..+...+...+.++.+++.
T Consensus 81 all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~ 118 (397)
T PRK05939 81 TLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA 118 (397)
T ss_pred HHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECC
Confidence 444455444443333322 1222334445555555543
No 323
>PRK06721 threonine synthase; Reviewed
Probab=21.72 E-value=4.6e+02 Score=25.93 Aligned_cols=88 Identities=8% Similarity=-0.108 Sum_probs=50.5
Q ss_pred ceeeeeCCe--eeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccC-CHHHHHHH
Q 008342 36 RKSVVYGSK--HYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRL-NATVVAFI 112 (569)
Q Consensus 36 ~~a~~~~~~--~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~l~~~ 112 (569)
++.+-.++. .=||++-... ..+.. ..+.|. +.|... ..+-.-..+.++|...|..+..+-|.. .+..-..+
T Consensus 44 ~i~~K~E~~nptGS~KdR~a~-~~i~~-a~~~g~---~~vV~a-SsGN~G~alA~~aa~~G~~~~vvvp~~~~~~~k~~~ 117 (352)
T PRK06721 44 QLYGKYEGANPTGSFKDRGMV-MAVAK-AKEEGS---EAIICA-STGNTSASAAAYAARLGMKCIIVIPEGKIAHGKLAQ 117 (352)
T ss_pred eEEEEecCCCCccchHHHHHH-HHHHH-HHHCCC---CEEEEE-CCcHHHHHHHHHHHHCCCcEEEEECCCCCCHHHHHH
Confidence 567766653 3344432222 22222 334442 344333 344455666677888898766666653 34445567
Q ss_pred HhcCCceEEEEcccchH
Q 008342 113 LSHASSAVVIVDQEFFS 129 (569)
Q Consensus 113 l~~~~~~~vi~~~~~~~ 129 (569)
++..+++++++......
T Consensus 118 ~~~~GA~V~~~~~~~~~ 134 (352)
T PRK06721 118 AVAYGAEIISIEGNFDD 134 (352)
T ss_pred HHHcCCEEEEECCCHHH
Confidence 88999999999876544
No 324
>PRK09192 acyl-CoA synthetase; Validated
Probab=21.70 E-value=6.5e+02 Score=26.78 Aligned_cols=85 Identities=8% Similarity=-0.047 Sum_probs=57.1
Q ss_pred eeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEecc-CC-------hHHHHHHHHh
Q 008342 213 VVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICLRQ-VT-------AKAVYTAIAT 281 (569)
Q Consensus 213 v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~-~~-------~~~~~~~i~~ 281 (569)
-.+|...+...+..... ..+++++|++...++-+..+ +...++++..|+..+.+.. +. .+++...+++
T Consensus 48 ~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~-~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~ 126 (579)
T PRK09192 48 EALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDF-VEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLAS 126 (579)
T ss_pred EEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhH-HHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHh
Confidence 55788887655544444 35889999999888864322 3344455566666666632 11 5788999999
Q ss_pred cCccEEeehHHHHHHHH
Q 008342 282 HGVTHFCAAPVVLNAIA 298 (569)
Q Consensus 282 ~~~t~l~~~P~~~~~l~ 298 (569)
.++..++........+.
T Consensus 127 ~~~~~il~~~~~~~~~~ 143 (579)
T PRK09192 127 AQPAAIITPDELLPWVN 143 (579)
T ss_pred cCCCEEEeChHHHHHHH
Confidence 99999998776654444
No 325
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=21.63 E-value=4.2e+02 Score=28.59 Aligned_cols=78 Identities=5% Similarity=-0.208 Sum_probs=53.6
Q ss_pred eeecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEecc-CC-----hHHHHHHHHhcC
Q 008342 213 VVVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICLRQ-VT-----AKAVYTAIATHG 283 (569)
Q Consensus 213 v~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~-~~-----~~~~~~~i~~~~ 283 (569)
..+|+..+......... ..++.++|++...++-+.-+ +...++++..|+..+.++. .. +.++...+++.+
T Consensus 68 ~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~-~~~~lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~ 146 (614)
T PRK08180 68 RRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEH-ALLALAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLT 146 (614)
T ss_pred eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHH-HHHHHHHHHcCCeEeeeccccccccCCHHHHHHHHhcCC
Confidence 46788888776655554 34889999999888764322 2344455566666666643 33 578889999999
Q ss_pred ccEEeehH
Q 008342 284 VTHFCAAP 291 (569)
Q Consensus 284 ~t~l~~~P 291 (569)
+..++...
T Consensus 147 ~~~li~~~ 154 (614)
T PRK08180 147 PGLVFADD 154 (614)
T ss_pred CcEEEEcC
Confidence 99888753
No 326
>PF00291 PALP: Pyridoxal-phosphate dependent enzyme; InterPro: IPR001926 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. Pyridoxal-5'-phosphate-dependent enzymes (B6 enzymes) catalyze manifold reactions in the metabolism of amino acids. Most of these enzymes can be assigned to one of three different families of homologous proteins, the alpha, beta and gamma families. The alpha and gamma family might be distantly related with one another, but are clearly not homologous with the beta family. The beta family includes L- and D-serine dehydratase, threonine dehydratase, the beta subunit of tryptophan synthase, threonine synthase and cysteine synthase. These enzymes catalyze beta-replacement or beta-elimination reactions []. Comparison of sequences from eukaryotic, archebacterial, and eubacterial species indicates that the functional specialization of most B6 enzymes has occurred already in the universal ancestor cell. The cofactor pyridoxal-5-phosphate must have emerged very early in biological evolution; conceivably, organic cofactors and metal ions were the first biological catalysts []. The 3D structure of the beta-subunit of tryptophan synthase has been solved. The subunit has two domains that are approximately the same size and similar to each other in folding pattern. Each has a core containing a four-stranded parallel beta-sheet with three helices on its inner side and one on the outer side. The cofactor is bound at the interface between the domains [].; GO: 0003824 catalytic activity, 0030170 pyridoxal phosphate binding, 0008152 metabolic process; PDB: 1P5J_A 2D1F_B 3AEY_B 3AEX_B 3IAU_A 2Q3B_A 2Q3D_A 2Q3C_A 1TZJ_A 1RQX_D ....
Probab=21.56 E-value=6.1e+02 Score=24.13 Aligned_cols=56 Identities=16% Similarity=0.056 Sum_probs=42.0
Q ss_pred CCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEccc
Q 008342 70 GTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQE 126 (569)
Q Consensus 70 g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 126 (569)
++.| +....+-....+.++|...|..++.+-|......-...++..+++++.+...
T Consensus 56 ~~~v-v~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 111 (306)
T PF00291_consen 56 GRTV-VGASSGNHGRALAYAAARLGLKCTIVVPEDVSPEKLKQMRALGAEVILVPGD 111 (306)
T ss_dssp TSEE-EEESSSHHHHHHHHHHHHHTCEEEEEEETTSHHHHHHHHHHTTCEEEEESST
T ss_pred ccee-eeeccCCceehhhhhhhhccccceeeeccccccccccceeeecceEEEcccc
Confidence 4566 5555566666677788888987777777766677788899999999988764
No 327
>PF09153 DUF1938: Domain of unknown function (DUF1938); InterPro: IPR015236 This domain, which is predominantly found in the archaeal protein O6-alkylguanine-DNA alkyltransferase, adopts a secondary structure consisting of a three stranded antiparallel beta-sheet and three alpha helices. The exact function has not, as yet, been defined, though it has been postulated that this domain may confer thermostability to the protein []. ; GO: 0005737 cytoplasm; PDB: 1MGT_A.
Probab=21.50 E-value=2.4e+02 Score=20.95 Aligned_cols=40 Identities=20% Similarity=0.255 Sum_probs=23.0
Q ss_pred eeeeeCC--e----eeeHHHHHH-HHHHHHHHHHhcCCCCCCEEEEEcCCc
Q 008342 37 KSVVYGS--K----HYTWHQTYR-RCRRFASALSKLSIGLGTTVSVIAPNV 80 (569)
Q Consensus 37 ~a~~~~~--~----~~Ty~el~~-~~~~la~~L~~~g~~~g~~V~i~~~~~ 80 (569)
+|+++.+ + +++=.|+.+ ++.+++..|.+.|+ .|-+--.+|
T Consensus 16 I~vi~e~kIqGItfslDg~efl~eri~~L~~~L~kRgv----~v~L~~~~S 62 (86)
T PF09153_consen 16 IAVIFEEKIQGITFSLDGEEFLRERISRLIEFLKKRGV----SVSLDEEPS 62 (86)
T ss_dssp EEEEESSSEEEEEEESSHHHHHH-HHHHHHHHHHHTT----------B---
T ss_pred EEEEEcCceeeEEEEeccHHHHHHHHHHHHHHHHhcCc----eeEEeecCC
Confidence 5666666 2 344478887 99999999999876 454444433
No 328
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=21.26 E-value=4.4e+02 Score=21.18 Aligned_cols=56 Identities=11% Similarity=0.040 Sum_probs=40.8
Q ss_pred HHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccc---hHHHHHHHHHHh
Q 008342 84 YEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEF---FSLAEEALKMME 139 (569)
Q Consensus 84 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---~~~~~~~~~~~~ 139 (569)
..+...+-..|.-++.+.+..+.+++.....+.+|++|..+... .+.+.+..+.+.
T Consensus 17 ~~~~~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~ 75 (122)
T cd02071 17 KVIARALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLR 75 (122)
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHH
Confidence 33344455678999999999999999999999999999987543 334444444443
No 329
>PRK12483 threonine dehydratase; Reviewed
Probab=21.14 E-value=6.4e+02 Score=26.63 Aligned_cols=97 Identities=12% Similarity=0.097 Sum_probs=57.1
Q ss_pred CceeeeeCCee--eeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHH
Q 008342 35 TRKSVVYGSKH--YTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFI 112 (569)
Q Consensus 35 ~~~a~~~~~~~--~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 112 (569)
.++.+-.++.+ -||+ .+-..+.+.....+. .++| . +....+-....+.++|...|..+..+=|...+..-...
T Consensus 52 ~~IylK~E~lqptGSfK-~RGA~n~i~~l~~~~-~~~G-V--V~aSaGNha~gvA~aA~~lGi~~~IvmP~~tp~~Kv~~ 126 (521)
T PRK12483 52 NQVLLKREDLQPVFSFK-IRGAYNKMARLPAEQ-LARG-V--ITASAGNHAQGVALAAARLGVKAVIVMPRTTPQLKVDG 126 (521)
T ss_pred CEEEEEEcCCCCCCchH-HHHHHHHHHHhHHHH-hcCc-E--EEECCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHH
Confidence 35566555533 3453 333344444432222 2344 3 33444556666778888899877766665555555678
Q ss_pred HhcCCceEEEEcccchHHHHHHHH
Q 008342 113 LSHASSAVVIVDQEFFSLAEEALK 136 (569)
Q Consensus 113 l~~~~~~~vi~~~~~~~~~~~~~~ 136 (569)
++.++++++++...+.+....+.+
T Consensus 127 ~r~~GAeVil~g~~~d~a~~~A~~ 150 (521)
T PRK12483 127 VRAHGGEVVLHGESFPDALAHALK 150 (521)
T ss_pred HHHCCCEEEEECCCHHHHHHHHHH
Confidence 999999999998765554444433
No 330
>PRK08813 threonine dehydratase; Provisional
Probab=21.12 E-value=8.2e+02 Score=24.24 Aligned_cols=57 Identities=9% Similarity=-0.069 Sum_probs=39.6
Q ss_pred EEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHH
Q 008342 75 VIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLA 131 (569)
Q Consensus 75 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 131 (569)
+.....-.-..+.++|...|..+..+-|...+..-...++.+++.++.+..++.+..
T Consensus 85 V~aSsGN~G~alA~aa~~~Gi~~~IvvP~~~~~~K~~~i~~~GAeVv~~g~~~~~a~ 141 (349)
T PRK08813 85 ICASAGNHAQGVAWSAYRLGVQAITVMPHGAPQTKIAGVAHWGATVRQHGNSYDEAY 141 (349)
T ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECCCHHHHH
Confidence 344445566677788888898666655555555667778999999999977654443
No 331
>cd06447 D-Ser-dehyd D-Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- or D-serine to pyruvate and ammonia. D-serine dehydratase serves as a detoxifying enzyme in most E. coli strains where D-serine is a competitive antagonist of beta-alanine in the biosynthetic pathway to pentothenate and coenzyme A. D-serine dehydratase is different from other pyridoxal-5'-phosphate-dependent enzymes in that it catalyzes alpha, beta-elimination reactions on amino acids.
Probab=21.03 E-value=5.1e+02 Score=26.27 Aligned_cols=61 Identities=11% Similarity=-0.039 Sum_probs=43.6
Q ss_pred EEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHH
Q 008342 74 SVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEA 134 (569)
Q Consensus 74 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 134 (569)
.+.....-.-..+.++|...|..+..+=|...+..-...++.++++++++..+.......+
T Consensus 137 VV~aSsGN~G~alA~~a~~~G~~~~IvvP~~~~~~K~~~ira~GAeVv~v~~~~~~a~~~a 197 (404)
T cd06447 137 IAVGSTGNLGLSIGIMAAALGFKVTVHMSADAKQWKKDKLRSKGVTVVEYETDYSKAVEEG 197 (404)
T ss_pred EEEECccHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEECCCHHHHHHHH
Confidence 3444445556677788889998777666666666778889999999999987655544433
No 332
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=21.02 E-value=4.1e+02 Score=26.68 Aligned_cols=9 Identities=11% Similarity=-0.127 Sum_probs=4.1
Q ss_pred eHHHHHHHH
Q 008342 47 TWHQTYRRC 55 (569)
Q Consensus 47 Ty~el~~~~ 55 (569)
|+.+|.++.
T Consensus 54 ~~~~lE~~l 62 (385)
T PRK08574 54 TLRPLEEAL 62 (385)
T ss_pred cHHHHHHHH
Confidence 445544443
No 333
>PRK10595 SOS cell division inhibitor; Provisional
Probab=20.95 E-value=3.9e+02 Score=23.07 Aligned_cols=15 Identities=20% Similarity=0.180 Sum_probs=7.7
Q ss_pred HHHHHhcCCceEEEE
Q 008342 109 VAFILSHASSAVVIV 123 (569)
Q Consensus 109 l~~~l~~~~~~~vi~ 123 (569)
+...|+.-.+.+|++
T Consensus 98 ~EqaLrsG~~~aVL~ 112 (164)
T PRK10595 98 MERALRTGNYSVVLG 112 (164)
T ss_pred HHHHHhhCCCcEEEE
Confidence 444455555555555
No 334
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=20.87 E-value=4.1e+02 Score=28.15 Aligned_cols=80 Identities=11% Similarity=0.052 Sum_probs=54.1
Q ss_pred eecchHHHHHHHHhHhH----hCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEec-cCChHHHHHHHHhcCccEEe
Q 008342 214 VVSHRGAYLMSLNGALI----WGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICLR-QVTAKAVYTAIATHGVTHFC 288 (569)
Q Consensus 214 ~~t~~~~~~~~~~~~~~----~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 288 (569)
.+|...+.......... .++.+++++....+-...+ ....++++..|+..+.++ ...++++...+++.+++.++
T Consensus 48 ~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii 126 (560)
T PRK08974 48 VMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQY-PIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIV 126 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEEE
Confidence 56777776665544443 4788999998887654222 233445556666666664 46778899999999999998
Q ss_pred ehHHHH
Q 008342 289 AAPVVL 294 (569)
Q Consensus 289 ~~P~~~ 294 (569)
..+...
T Consensus 127 ~~~~~~ 132 (560)
T PRK08974 127 IVSNFA 132 (560)
T ss_pred Eecccc
Confidence 766543
No 335
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=20.83 E-value=4.8e+02 Score=27.40 Aligned_cols=77 Identities=10% Similarity=-0.006 Sum_probs=51.5
Q ss_pred eecchHHHHHHHHhHh---HhCCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCChHHHHHHHHhcCccEEee
Q 008342 214 VVSHRGAYLMSLNGAL---IWGMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVTAKAVYTAIATHGVTHFCA 289 (569)
Q Consensus 214 ~~t~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~ 289 (569)
.+|+..+......... ..++.+++++...++-...+ ....+++...|+..+.+ +.....++...+++.++..++.
T Consensus 46 ~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~-~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~ 124 (541)
T TIGR03205 46 PITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDH-PINFFGALKAGARVVHLSPLDGERALSHKLSDSGARLLIT 124 (541)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEE
Confidence 4788877555544333 45888999999888754322 23344444556655555 4467789999999999999886
Q ss_pred hH
Q 008342 290 AP 291 (569)
Q Consensus 290 ~P 291 (569)
..
T Consensus 125 ~~ 126 (541)
T TIGR03205 125 SD 126 (541)
T ss_pred eC
Confidence 53
No 336
>PF02073 Peptidase_M29: Thermophilic metalloprotease (M29); InterPro: IPR000787 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M29 (aminopeptidase T family, clan M-). The protein fold of the peptidase domain and the active site residues are not known for any members of the thermophilic metallo-aminopeptidases family.; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 2AYI_D 1ZJC_A.
Probab=20.82 E-value=2e+02 Score=29.14 Aligned_cols=51 Identities=27% Similarity=0.245 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHhc--CCCCCCEEEEEcCCc-hhHHHHH-HHhhhcCceEeecc
Q 008342 51 TYRRCRRFASALSKL--SIGLGTTVSVIAPNV-PAMYEAQ-FGAPMAGAVLNSIN 101 (569)
Q Consensus 51 l~~~~~~la~~L~~~--g~~~g~~V~i~~~~~-~~~~~~~-lA~~~~G~~~v~l~ 101 (569)
+.++.+++|..|.+. ++++|+.|.|..+-. .+++-.+ -.+.++|+..+.+.
T Consensus 3 ~~~~l~kyA~llV~~glnvq~Gq~v~I~~~~~~~~l~r~l~~~ay~aGA~~v~v~ 57 (398)
T PF02073_consen 3 FDERLEKYAELLVKYGLNVQPGQKVLIRAPVEAAPLARALVEEAYEAGAKYVIVN 57 (398)
T ss_dssp HHHHHHHHHHHHHHTTT---TT-EEEEEEETT-HHHHHHHHHHHHHTT-SCEEEE
T ss_pred chHHHHHHHHHHHHhccCCCCCCEEEEEecccHHHHHHHHHHHHHHcCCCceEEE
Confidence 567889999999874 679999999988875 3444444 47888998444443
No 337
>PF01037 AsnC_trans_reg: AsnC family; InterPro: IPR019887 The many bacterial transcription regulation proteins which bind DNA through a 'helix-turn-helix' motif can be classified into subfamilies on the basis of sequence similarities. One such family is the AsnC/Lrp subfamily []. The Lrp family of transcriptional regulators appears to be widely distributed among bacteria and archaea, as an important regulatory system of the amino acid metabolism and related processes []. Members of the Lrp family are small DNA-binding proteins with molecular masses of around 15 kDa. Target promoters often contain a number of binding sites that typically lack obvious inverted repeat elements, and to which binding is usually co-operative. LrpA from Pyrococcus furiosus is the first Lrp-like protein to date of which a three-dimensional structure has been solved. In the crystal structure LrpA forms an octamer consisting of four dimers. The structure revealed that the N-terminal part of the protein consists of a helix-turn-helix (HTH) domain, a fold generally involved in DNA binding. The C terminus of Lrp-like proteins has a beta-fold, where the two alpha-helices are located at one side of the four-stranded antiparallel beta-sheet. LrpA forms a homodimer mainly through interactions between the beta-strands of this C-terminal domain, and an octamer through further interactions between the second alpha-helix and fourth beta-strand of the motif. Hence, the C-terminal domain of Lrp-like proteins appears to be involved in ligand-response and activation [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2DJW_F 2GQQ_A 2ZNY_E 2ZNZ_G 1RI7_A 2CYY_A 2E1C_A 2CG4_B 2DBB_B 1I1G_A ....
Probab=20.77 E-value=2.9e+02 Score=19.40 Aligned_cols=24 Identities=25% Similarity=0.116 Sum_probs=19.8
Q ss_pred echHHHHHHHhcCCCceeeEEEee
Q 008342 463 ISSVEVEKVLYLHPLVLEAAVVAR 486 (569)
Q Consensus 463 v~~~~iE~~l~~~~~v~~~~v~~~ 486 (569)
-...++.+.|.++|+|.+|..+.-
T Consensus 10 ~~~~~~~~~l~~~p~V~~~~~vtG 33 (74)
T PF01037_consen 10 DAYDEFAEALAEIPEVVECYSVTG 33 (74)
T ss_dssp THHHHHHHHHHTSTTEEEEEEESS
T ss_pred chHHHHHHHHHcCCCEEEEEEEeC
Confidence 346788899999999999988754
No 338
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=20.47 E-value=2.3e+02 Score=31.04 Aligned_cols=63 Identities=14% Similarity=0.059 Sum_probs=43.2
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccC---------CH-----HHHHHHHhcCC-c----eEEEEcccc
Q 008342 67 IGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRL---------NA-----TVVAFILSHAS-S----AVVIVDQEF 127 (569)
Q Consensus 67 ~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~---------~~-----~~l~~~l~~~~-~----~~vi~~~~~ 127 (569)
+++||.|. +-.||--.+.. |+...|+.++.+.|.. +. +.+...|+... + .++|+++.+
T Consensus 232 ~~~Gd~VL-vdRN~HKSv~~--aLilsga~PVYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTY 308 (713)
T PRK15399 232 APAGSTLL-IDRNCHKSLAH--LLMMSDVVPIWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTY 308 (713)
T ss_pred cCCCCEEE-eecccHHHHHH--HHHHcCCeeEEecccccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCC
Confidence 57899876 46666666544 9999999999998864 23 77777776542 2 466677766
Q ss_pred hHHHH
Q 008342 128 FSLAE 132 (569)
Q Consensus 128 ~~~~~ 132 (569)
.....
T Consensus 309 dGi~y 313 (713)
T PRK15399 309 DGLLY 313 (713)
T ss_pred Cceee
Confidence 55443
No 339
>PRK05638 threonine synthase; Validated
Probab=20.41 E-value=3.9e+02 Score=27.47 Aligned_cols=91 Identities=9% Similarity=-0.051 Sum_probs=50.9
Q ss_pred ceeeeeCC--eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHH
Q 008342 36 RKSVVYGS--KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFIL 113 (569)
Q Consensus 36 ~~a~~~~~--~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 113 (569)
++.+-.++ -+-||++= .....+...+ +.| .+.|+. ...+-....+.+.|.+.|..+..+-|...+..-...+
T Consensus 81 ~l~~K~E~~nPtGSfKdR-~a~~~i~~a~-~~g---~~~vv~-aSsGN~g~alA~~aa~~G~~~~i~vp~~~~~~k~~~~ 154 (442)
T PRK05638 81 NVYIKDETRNPTGSFRDR-LATVAVSYGL-PYA---ANGFIV-ASDGNAAASVAAYSARAGKEAFVVVPRKVDKGKLIQM 154 (442)
T ss_pred eEEEEeCCCCCCCChHHH-HHHHHHHHHH-HcC---CCEEEE-eCCChHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHH
Confidence 55655544 45566552 2222233333 333 345544 3334444455556667887655555544445556788
Q ss_pred hcCCceEEEEcccchHHHH
Q 008342 114 SHASSAVVIVDQEFFSLAE 132 (569)
Q Consensus 114 ~~~~~~~vi~~~~~~~~~~ 132 (569)
+.+++++++++.+......
T Consensus 155 ~~~GA~vi~v~~~~~~~~~ 173 (442)
T PRK05638 155 IAFGAKIIRYGESVDEAIE 173 (442)
T ss_pred HhcCcEEEEECCCHHHHHH
Confidence 9999999999876544433
No 340
>PLN02409 serine--glyoxylate aminotransaminase
Probab=20.37 E-value=6.6e+02 Score=25.31 Aligned_cols=74 Identities=11% Similarity=0.022 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHh-cCCCCCCEEEEEcCCchhHH-HHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcc
Q 008342 51 TYRRCRRFASALSK-LSIGLGTTVSVIAPNVPAMY-EAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQ 125 (569)
Q Consensus 51 l~~~~~~la~~L~~-~g~~~g~~V~i~~~~~~~~~-~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 125 (569)
+.+...++...|.+ .|.+.++.|.+.. ++...+ .++..++..|-.++..++.........+++..+.+++.+..
T Consensus 40 ~~~~~~~~~~~l~~~~g~~~~~~vi~~~-~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~ 115 (401)
T PLN02409 40 FPALTKELLEDVKYIFKTKSGTPFIFPT-TGTGAWESALTNTLSPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVES 115 (401)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEeC-CcHHHHHHHHHhcCCCCCEEEEeCCCchhHHHHHHHHHcCCceEEEEC
Confidence 33334444444433 2444444444433 444443 34445666776666666555555556667777777777653
No 341
>TIGR01124 ilvA_2Cterm threonine ammonia-lyase, biosynthetic, long form. Forms scoring between the trusted and noise cutoff tend to branch with this subgroup of threonine ammonia-lyase phylogenetically but have only a single copy of the C-terminal domain.
Probab=20.30 E-value=7.7e+02 Score=25.88 Aligned_cols=93 Identities=11% Similarity=0.051 Sum_probs=55.2
Q ss_pred CCCceeeeeCCe--eeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHH
Q 008342 33 HPTRKSVVYGSK--HYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVA 110 (569)
Q Consensus 33 ~p~~~a~~~~~~--~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~ 110 (569)
...++.+-.++. .-||+. +-..+.++..-.+.+ .+| .|. ...+-....+.++|.+.|+.++.+-|...+..-.
T Consensus 30 ~g~~i~lK~E~lqptgSfK~-RgA~n~i~~l~~~~~-~~g-VV~--aSaGNha~~vA~aa~~~Gi~~~IvmP~~tp~~Kv 104 (499)
T TIGR01124 30 LGNRILIKREDLQPVFSFKL-RGAYNKMAQLSPEQK-ARG-VIA--ASAGNHAQGVAFSAARLGLKALIVMPETTPDIKV 104 (499)
T ss_pred hCCEEEEEecCCCCCCCCHH-HHHHHHHHHhhHHhc-CCE-EEE--ECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHH
Confidence 334677776663 335554 322333333212221 222 333 3445556667778889998777766666655566
Q ss_pred HHHhcCCceEEEEcccchHH
Q 008342 111 FILSHASSAVVIVDQEFFSL 130 (569)
Q Consensus 111 ~~l~~~~~~~vi~~~~~~~~ 130 (569)
..++..+++++++.....+.
T Consensus 105 ~~~r~~GA~Vvl~g~~~d~a 124 (499)
T TIGR01124 105 DAVRGFGGEVVLHGANFDDA 124 (499)
T ss_pred HHHHhCCCEEEEeCcCHHHH
Confidence 78999999999997665433
No 342
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=20.28 E-value=4.5e+02 Score=26.33 Aligned_cols=17 Identities=6% Similarity=-0.167 Sum_probs=8.8
Q ss_pred HhhhcCceEeeccccCC
Q 008342 89 GAPMAGAVLNSINIRLN 105 (569)
Q Consensus 89 A~~~~G~~~v~l~~~~~ 105 (569)
+++..|-.++..++.++
T Consensus 85 all~~GD~Vl~~~p~y~ 101 (382)
T TIGR02080 85 ALLGPDDLLVAPHDCYG 101 (382)
T ss_pred HHcCCCCEEEEcCCCcH
Confidence 44555555554455554
No 343
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=20.28 E-value=1e+03 Score=25.48 Aligned_cols=102 Identities=12% Similarity=0.025 Sum_probs=61.9
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchhH----HHHHHHhhhcCc--eEeeccc------cCCHHHHHH
Q 008342 44 KHYTWHQTYRRCRRFASALSKLSIGLGTTVSVIAPNVPAM----YEAQFGAPMAGA--VLNSINI------RLNATVVAF 111 (569)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~----~~~~lA~~~~G~--~~v~l~~------~~~~~~l~~ 111 (569)
......++.+.+.+++..+.+ +..|.|+..-..+- .+++.++-+.|+ +...++. .++.+.+..
T Consensus 48 ~P~~l~~m~~a~~ri~~ai~~-----~e~I~I~gDyD~DGitstail~~~L~~~g~~~~~~~IP~R~~eGYGl~~~~i~~ 122 (575)
T PRK11070 48 PWQQLSGIEKAVELLYNALRE-----GTRIIVVGDFDADGATSTALSVLALRSLGCSNVDYLVPNRFEDGYGLSPEVVDQ 122 (575)
T ss_pred ChHHhhCHHHHHHHHHHHHHC-----CCEEEEEEecCccHHHHHHHHHHHHHHcCCCceEEEeCCCCcCCCCCCHHHHHH
Confidence 345677888888888877755 67999998876543 344556777887 3334432 466777777
Q ss_pred HHhcCCceEEEEcccchHHHHHHHHHHhhhcCCCCCcCeEEEecCCC
Q 008342 112 ILSHASSAVVIVDQEFFSLAEEALKMMEANSEGKLKTPHLIVIGDES 158 (569)
Q Consensus 112 ~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 158 (569)
+.+ .+++++|+-+--.....+...... ....+|+.++..
T Consensus 123 ~~~-~~~~LiItvD~Gi~~~e~i~~a~~-------~gidvIVtDHH~ 161 (575)
T PRK11070 123 AHA-RGAQLIVTVDNGISSHAGVAHAHA-------LGIPVLVTDHHL 161 (575)
T ss_pred HHh-cCCCEEEEEcCCcCCHHHHHHHHH-------CCCCEEEECCCC
Confidence 655 477888876544333333221111 235566666653
No 344
>PRK08638 threonine dehydratase; Validated
Probab=20.22 E-value=7.6e+02 Score=24.18 Aligned_cols=58 Identities=7% Similarity=-0.019 Sum_probs=40.7
Q ss_pred cCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHH
Q 008342 77 APNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEA 134 (569)
Q Consensus 77 ~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 134 (569)
...+-.-..+.++|...|..+..+-|...+..-...++.++++++++.....+....+
T Consensus 81 ~SsGN~g~alA~~aa~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~a 138 (333)
T PRK08638 81 CSAGNHAQGVALSCALLGIDGKVVMPKGAPKSKVAATCGYGAEVVLHGDNFNDTIAKV 138 (333)
T ss_pred eCCcHHHHHHHHHHHHcCCCEEEEeCCCCcHHHHHHHHHcCCEEEEECcCHHHHHHHH
Confidence 3334556667778888998776666665556667789999999999976654444333
No 345
>COG5012 Predicted cobalamin binding protein [General function prediction only]
Probab=20.20 E-value=3.9e+02 Score=24.37 Aligned_cols=82 Identities=15% Similarity=0.170 Sum_probs=49.7
Q ss_pred cchhhHHHHHHHHHhcceEEE-e-ccCChHHHHHHHHhcCccEEeehHHHHHHHHcc------CCCCCCCCcccceeeee
Q 008342 246 FHGNGWSYTWSLAALCGTSIC-L-RQVTAKAVYTAIATHGVTHFCAAPVVLNAIANA------SPEDTILPLTNVVNVNT 317 (569)
Q Consensus 246 ~~~~g~~~~~~~~~~g~~~~~-~-~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~------~~~~~~~~l~~l~~~~~ 317 (569)
.|..|-.....++-..|--++ + ....+++|.+..++++++.+.++-.+-..+... ..... ++.--.+.+
T Consensus 116 vHdIGk~iV~~ml~~aGfevidLG~dvP~e~fve~a~e~k~d~v~~SalMTttm~~~~~viE~L~eeG---iRd~v~v~v 192 (227)
T COG5012 116 VHDIGKNIVATMLEAAGFEVIDLGRDVPVEEFVEKAKELKPDLVSMSALMTTTMIGMKDVIELLKEEG---IRDKVIVMV 192 (227)
T ss_pred HHHHHHHHHHHHHHhCCcEEEecCCCCCHHHHHHHHHHcCCcEEechHHHHHHHHHHHHHHHHHHHcC---CccCeEEee
Confidence 566776655555545553333 3 345679999999999999998765543333221 11111 223334677
Q ss_pred cCCCCCHHHHHHh
Q 008342 318 AGAPPPPSLLFAM 330 (569)
Q Consensus 318 ~g~~l~~~~~~~~ 330 (569)
||.|++.+....+
T Consensus 193 GGApvtq~~a~~i 205 (227)
T COG5012 193 GGAPVTQDWADKI 205 (227)
T ss_pred cCccccHHHHHHh
Confidence 9999997766544
No 346
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=20.18 E-value=1.1e+03 Score=25.38 Aligned_cols=83 Identities=4% Similarity=-0.153 Sum_probs=53.0
Q ss_pred eeecchHHHHHHHHhHhHh--CCCCCcEEEEcCCccchhhHHHHHHHHHhcceEEEe-ccCC---hHHHHHHHHhcCccE
Q 008342 213 VVVSHRGAYLMSLNGALIW--GMNEGAVFLWTLPMFHGNGWSYTWSLAALCGTSICL-RQVT---AKAVYTAIATHGVTH 286 (569)
Q Consensus 213 v~~t~~~~~~~~~~~~~~~--~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~---~~~~~~~i~~~~~t~ 286 (569)
..+|++.+...+......+ .+.++|++...++-+..+ +...++++..|+..+.+ .... ..++...+++.++..
T Consensus 54 ~~~Ty~el~~~v~~lA~~L~~~~~~gd~V~i~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~ 132 (631)
T PRK07769 54 RDLTWSQFGARNRAVGARLQQVTKPGDRVAILAPQNLDY-LIAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSA 132 (631)
T ss_pred eEeeHHHHHHHHHHHHHHHHHhcCCCCEEEEEcCCChHH-HHHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCE
Confidence 4578888766655544432 268899998888765322 23334445556555544 2222 467888999999999
Q ss_pred EeehHHHHHH
Q 008342 287 FCAAPVVLNA 296 (569)
Q Consensus 287 l~~~P~~~~~ 296 (569)
++........
T Consensus 133 vi~~~~~~~~ 142 (631)
T PRK07769 133 ILTTTDSAEG 142 (631)
T ss_pred EEEChHHHHH
Confidence 9988765543
No 347
>PRK06110 hypothetical protein; Provisional
Probab=20.10 E-value=6.6e+02 Score=24.42 Aligned_cols=62 Identities=15% Similarity=0.096 Sum_probs=40.5
Q ss_pred EEcCCchhHHHHHHHhhhcCceEeeccccCCHHHHHHHHhcCCceEEEEcccchHHHHHHHH
Q 008342 75 VIAPNVPAMYEAQFGAPMAGAVLNSINIRLNATVVAFILSHASSAVVIVDQEFFSLAEEALK 136 (569)
Q Consensus 75 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~ 136 (569)
+-...+-.-..+.++|...|..+..+-|...+..-...++.++++++.+..........+.+
T Consensus 74 v~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~~~~~~~~a~~ 135 (322)
T PRK06110 74 ISATRGNHGQSVAFAARRHGLAATIVVPHGNSVEKNAAMRALGAELIEHGEDFQAAREEAAR 135 (322)
T ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECCCHHHHHHHHHH
Confidence 33445556677778888999865555444333444588999999999997665544444433
Done!