Query 008343
Match_columns 569
No_of_seqs 501 out of 2808
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 23:58:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008343.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008343hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xzw_A Purple acid phosphatase 100.0 4.9E-69 1.7E-73 579.6 44.0 399 67-545 6-422 (426)
2 2qfp_A Purple acid phosphatase 100.0 3.7E-67 1.3E-71 564.5 44.8 397 69-545 2-415 (424)
3 2yeq_A Apased, PHOD, alkaline 100.0 2.4E-39 8.1E-44 356.1 39.5 314 95-427 16-389 (527)
4 3tgh_A Glideosome-associated p 100.0 9.2E-34 3.2E-38 295.1 25.1 253 208-548 3-310 (342)
5 1ute_A Protein (II purple acid 100.0 4.6E-29 1.6E-33 254.5 24.4 257 208-545 6-303 (313)
6 3ib7_A ICC protein; metallopho 99.9 4.2E-22 1.4E-26 205.2 21.3 197 207-449 24-242 (330)
7 3d03_A Phosphohydrolase; glyce 99.9 8.1E-21 2.8E-25 190.2 22.2 193 209-446 1-215 (274)
8 2nxf_A Putative dimetal phosph 99.9 2.9E-21 9.8E-26 197.3 16.1 206 208-446 5-286 (322)
9 2xmo_A LMO2642 protein; phosph 99.8 7.7E-18 2.6E-22 181.2 23.8 194 207-425 38-288 (443)
10 2yvt_A Hypothetical protein AQ 99.5 3.5E-13 1.2E-17 133.8 14.6 200 208-420 5-222 (260)
11 1uf3_A Hypothetical protein TT 99.5 1.9E-13 6.6E-18 132.4 12.4 173 208-420 5-190 (228)
12 2q8u_A Exonuclease, putative; 99.4 2.8E-13 9.7E-18 140.4 11.6 188 208-425 18-235 (336)
13 2a22_A Vacuolar protein sortin 99.2 2.5E-10 8.6E-15 110.7 16.5 143 208-448 25-171 (215)
14 1z2w_A Vacuolar protein sortin 99.2 1.1E-09 3.9E-14 104.1 19.5 134 208-448 10-147 (192)
15 1nnw_A Hypothetical protein; s 99.2 4.5E-11 1.5E-15 118.2 9.4 186 209-448 2-197 (252)
16 3rl5_A Metallophosphoesterase 99.2 1.3E-10 4.5E-15 117.8 12.5 199 208-449 59-278 (296)
17 3ck2_A Conserved uncharacteriz 99.2 9.3E-10 3.2E-14 103.1 17.4 58 375-448 78-135 (176)
18 3tho_B Exonuclease, putative; 99.1 3.4E-10 1.2E-14 119.3 13.8 189 209-425 1-217 (379)
19 3qfm_A SAPH, putative uncharac 99.1 2.2E-10 7.7E-15 115.1 11.6 186 207-449 10-196 (270)
20 3av0_A DNA double-strand break 99.1 6.2E-10 2.1E-14 117.6 15.4 174 208-424 20-212 (386)
21 1xm7_A Hypothetical protein AQ 99.0 1.7E-09 5.9E-14 102.9 10.9 48 375-425 107-154 (195)
22 2kkn_A Uncharacterized protein 98.9 2E-08 6.9E-13 94.4 15.5 62 208-303 22-86 (178)
23 1s3l_A Hypothetical protein MJ 98.9 6.6E-09 2.3E-13 98.8 11.7 140 209-448 26-167 (190)
24 3rqz_A Metallophosphoesterase; 98.9 6.2E-09 2.1E-13 102.8 11.2 151 208-422 3-154 (246)
25 1ii7_A MRE11 nuclease; RAD50, 98.8 1.3E-08 4.4E-13 105.2 10.8 73 209-303 1-88 (333)
26 3t1i_A Double-strand break rep 98.8 2.2E-07 7.7E-12 98.8 20.3 41 207-247 31-84 (431)
27 4fbw_A DNA repair protein RAD3 98.8 2.5E-07 8.7E-12 97.9 19.9 41 206-246 11-64 (417)
28 4fbk_A DNA repair and telomere 98.7 1.1E-06 3.7E-11 94.0 21.3 41 207-247 75-128 (472)
29 2z1a_A 5'-nucleotidase; metal- 98.5 4.3E-07 1.5E-11 100.2 13.6 174 207-424 28-244 (552)
30 1hp1_A 5'-nucleotidase; metall 98.5 4.3E-07 1.5E-11 99.4 11.4 190 207-424 7-233 (516)
31 3qfk_A Uncharacterized protein 98.4 2.8E-06 9.6E-11 93.2 15.3 188 208-424 19-253 (527)
32 1su1_A Hypothetical protein YF 98.4 6.3E-07 2.2E-11 86.2 8.6 76 208-303 25-101 (208)
33 4h2g_A 5'-nucleotidase; dimer, 98.3 1.9E-06 6.4E-11 95.0 11.9 176 207-423 24-245 (546)
34 3ztv_A NAD nucleotidase, NADN; 98.3 4E-06 1.4E-10 93.0 14.2 176 207-423 11-231 (579)
35 2wdc_A SOXB, sulfur oxidation 98.3 7.6E-06 2.6E-10 90.3 15.9 144 235-423 123-291 (562)
36 3ive_A Nucleotidase; structura 98.2 8.5E-06 2.9E-10 88.9 14.1 188 208-422 6-237 (509)
37 3c9f_A 5'-nucleotidase; 2',3'- 98.2 8.5E-05 2.9E-09 81.8 20.3 194 196-423 3-243 (557)
38 1t71_A Phosphatase, conserved 98.1 3.9E-05 1.3E-09 76.9 15.2 190 208-448 4-209 (281)
39 1g5b_A Serine/threonine protei 98.1 1.9E-06 6.5E-11 83.3 5.0 39 208-246 12-52 (221)
40 2z06_A Putative uncharacterize 98.1 6.6E-05 2.3E-09 74.0 15.4 188 209-449 1-197 (252)
41 1t70_A Phosphatase; crystal, X 98.0 0.0001 3.6E-09 72.8 15.7 188 209-449 1-200 (255)
42 3gve_A YFKN protein; alpha-bet 97.9 0.00015 5.2E-09 74.9 14.2 59 359-422 194-253 (341)
43 3jyf_A 2',3'-cyclic nucleotide 97.7 0.00082 2.8E-08 69.3 16.7 39 208-246 8-64 (339)
44 4h1s_A 5'-nucleotidase; hydrol 97.6 0.0008 2.7E-08 73.6 16.1 173 207-423 2-223 (530)
45 2ede_A Netrin receptor DCC; tu 96.6 0.018 6.1E-07 48.3 11.2 96 84-204 10-111 (114)
46 2crz_A Fibronectin type-III do 96.5 0.012 4.1E-07 49.3 9.2 92 85-202 11-105 (110)
47 1x4x_A Fibronectin type-III do 96.5 0.011 3.7E-07 49.4 8.8 37 166-202 62-101 (106)
48 1x4y_A Biregional cell adhesio 96.5 0.021 7E-07 48.2 10.5 40 165-204 69-111 (114)
49 1x5l_A Ephrin type-A receptor 96.4 0.016 5.3E-07 48.4 9.2 40 165-204 66-108 (111)
50 2edd_A Netrin receptor DCC; tu 96.3 0.061 2.1E-06 46.3 12.9 37 165-201 78-117 (123)
51 2qjc_A Diadenosine tetraphosph 96.2 0.0025 8.7E-08 63.1 3.8 38 209-246 19-58 (262)
52 1x5f_A Neogenin; RGM binding, 96.2 0.053 1.8E-06 45.7 11.7 93 85-203 20-116 (120)
53 2haz_A N-CAM 1, neural cell ad 96.1 0.024 8.2E-07 47.1 8.6 36 165-200 66-104 (105)
54 2dfj_A Diadenosinetetraphospha 96.0 0.0037 1.3E-07 62.6 3.9 38 209-246 1-40 (280)
55 1x5j_A Neogenin; RGM binding, 96.0 0.026 8.8E-07 48.0 8.6 95 84-201 10-107 (113)
56 1x5x_A Fibronectin type-III do 96.0 0.041 1.4E-06 45.8 9.8 37 166-202 65-104 (109)
57 2djs_A Ephrin type-B receptor 95.9 0.024 8.3E-07 47.1 8.0 39 165-203 63-104 (108)
58 2dm4_A Sortilin-related recept 95.9 0.053 1.8E-06 45.0 10.2 89 85-201 10-102 (108)
59 2edy_A Receptor-type tyrosine- 95.8 0.01 3.4E-07 48.8 5.3 35 166-200 65-102 (103)
60 3e0j_A DNA polymerase subunit 95.8 0.037 1.3E-06 59.1 10.6 180 208-425 200-420 (476)
61 2ed8_A Netrin receptor DCC; tu 95.8 0.073 2.5E-06 43.9 10.5 89 85-202 10-101 (106)
62 1x5g_A Neogenin; RGM binding, 95.8 0.049 1.7E-06 45.6 9.4 89 85-202 20-111 (116)
63 2e7h_A Ephrin type-B receptor 95.7 0.038 1.3E-06 46.1 8.4 39 166-204 65-106 (109)
64 2ee3_A Collagen alpha-1(XX) ch 95.6 0.075 2.6E-06 44.9 9.9 90 83-202 8-99 (108)
65 2ee2_A Contactin-1; neural cel 95.6 0.098 3.3E-06 44.1 10.8 39 165-203 74-115 (119)
66 1x5z_A Receptor-type tyrosine- 95.5 0.076 2.6E-06 44.3 9.6 38 165-202 70-110 (115)
67 2ed7_A Netrin receptor DCC; tu 95.5 0.13 4.4E-06 43.1 11.1 94 84-203 19-115 (119)
68 3teu_A Fibcon; FN3 domain, fib 95.4 0.068 2.3E-06 43.5 9.0 88 85-201 4-91 (98)
69 2edx_A Protein tyrosine phosph 95.4 0.13 4.5E-06 44.0 11.1 38 165-202 79-119 (134)
70 3b83_A Ten-D3; beta sheet, com 95.4 0.16 5.5E-06 41.7 11.1 80 85-193 4-83 (100)
71 2dju_A Receptor-type tyrosine- 95.3 0.065 2.2E-06 43.9 8.5 37 166-202 62-101 (106)
72 2cui_A Tenascin-X; fibronectin 95.3 0.065 2.2E-06 45.7 8.6 89 84-202 10-109 (112)
73 2ie4_C PP2A-alpha;, serine/thr 95.3 0.011 3.8E-07 59.9 4.3 38 209-246 50-88 (309)
74 2ed9_A Netrin receptor DCC; tu 95.2 0.11 3.6E-06 44.1 9.8 90 85-200 31-123 (124)
75 2kbg_A N-CAM 2, neural cell ad 95.1 0.068 2.3E-06 45.8 8.2 83 95-202 19-103 (114)
76 2crm_A Fibronectin type-III do 95.1 0.031 1.1E-06 47.4 6.0 37 166-202 76-115 (120)
77 2dkm_A Collagen alpha-1(XX) ch 95.1 0.084 2.9E-06 43.8 8.5 38 166-203 62-101 (104)
78 2rb8_A Tenascin; beta sheet,lo 95.1 0.11 3.8E-06 43.1 9.2 89 85-203 5-96 (104)
79 1wfo_A Sidekick 2; FN3, cell a 95.1 0.17 5.8E-06 43.2 10.7 94 85-203 30-126 (130)
80 2dbj_A Proto-oncogene tyrosine 95.0 0.25 8.6E-06 42.0 11.5 38 166-203 80-120 (124)
81 3p4l_A Neogenin; iron homeosta 94.9 0.24 8.4E-06 45.9 12.2 38 165-202 64-104 (211)
82 2db8_A Tripartite motif protei 94.8 0.055 1.9E-06 45.4 6.8 38 166-203 66-106 (110)
83 3lpw_A A77-A78 domain from tit 94.8 0.2 6.8E-06 45.4 11.1 76 85-186 8-83 (197)
84 2vkw_A Neural cell adhesion mo 94.8 0.15 5.1E-06 47.3 10.4 95 84-201 10-107 (209)
85 1va9_A DOWN syndrome cell adhe 94.8 0.16 5.4E-06 42.7 9.6 95 85-202 18-118 (122)
86 2z72_A Protein-tyrosine-phosph 94.8 0.02 6.9E-07 58.9 4.4 24 400-423 268-291 (342)
87 1x3d_A Fibronectin type-III do 94.7 0.15 5E-06 42.9 9.2 37 166-202 74-113 (118)
88 1k85_A Chitinase A1; fibronect 94.7 0.19 6.6E-06 39.9 9.4 33 166-198 52-88 (88)
89 2dmk_A Midline 2 isoform 2; mi 94.7 0.12 4E-06 44.6 8.7 36 166-201 81-118 (127)
90 1x5h_A Neogenin; RGM binding, 94.7 0.19 6.5E-06 43.0 10.0 37 165-201 77-116 (132)
91 3tes_A Tencon; fibronectin typ 94.7 0.1 3.6E-06 42.8 7.9 79 85-193 4-83 (98)
92 1wis_A KIAA1514 protein; FNIII 94.7 0.15 5.2E-06 43.5 9.3 38 165-202 79-120 (124)
93 2yux_A Myosin-binding protein 94.7 0.15 5.2E-06 43.2 9.2 81 85-191 20-100 (120)
94 1uc6_A CNTF receptor, ciliary 94.6 0.26 8.8E-06 41.1 10.5 92 84-199 9-106 (109)
95 1fjm_A Protein serine/threonin 94.6 0.02 7E-07 58.5 4.0 38 209-246 57-95 (330)
96 1x5a_A Ephrin type-A receptor 94.6 0.04 1.4E-06 46.1 5.2 38 167-204 64-104 (107)
97 2dlh_A Receptor-type tyrosine- 94.5 0.42 1.4E-05 39.9 11.7 38 165-202 76-116 (121)
98 2dle_A Receptor-type tyrosine- 94.5 0.38 1.3E-05 40.2 11.1 39 165-203 59-99 (104)
99 2cum_A Tenascin-X; hexabrachio 94.4 0.24 8.4E-06 41.0 9.8 86 85-201 10-97 (105)
100 2dn7_A Receptor-type tyrosine- 94.4 0.32 1.1E-05 39.7 10.5 87 86-201 11-100 (107)
101 3n1f_C Cell adhesion molecule- 94.4 0.23 8E-06 41.0 9.5 89 84-198 6-101 (102)
102 2gee_A Hypothetical protein; f 94.3 0.52 1.8E-05 43.5 13.0 103 85-216 25-127 (203)
103 2e3v_A Neural cell adhesion mo 94.3 0.14 4.8E-06 43.7 8.1 37 166-202 68-107 (122)
104 2cuh_A Tenascin-X; fibronectin 94.3 0.22 7.5E-06 41.9 9.3 38 165-202 59-98 (115)
105 3f7q_A Integrin beta-4, GP150; 94.2 0.35 1.2E-05 45.8 11.6 103 84-216 7-112 (234)
106 1x4z_A Biregional cell adhesio 94.1 0.16 5.6E-06 42.9 8.2 77 85-186 20-97 (121)
107 1qr4_A Protein (tenascin); fib 93.9 0.19 6.5E-06 45.6 8.8 88 84-201 96-185 (186)
108 1uen_A KIAA0343 protein; immun 93.9 0.12 4.2E-06 43.7 6.9 38 165-202 80-120 (125)
109 3h63_A Serine/threonine-protei 93.8 0.052 1.8E-06 55.1 5.1 23 399-421 233-255 (315)
110 3e7a_A PP-1A, serine/threonine 93.8 0.038 1.3E-06 55.7 4.0 23 399-421 228-250 (299)
111 1qr4_A Protein (tenascin); fib 93.8 0.25 8.7E-06 44.7 9.4 88 84-202 8-97 (186)
112 1wk0_A KIAA0970 protein; fibro 93.8 0.032 1.1E-06 49.5 3.1 47 165-211 82-131 (137)
113 1wao_1 Serine/threonine protei 93.7 0.075 2.6E-06 56.9 6.5 25 400-424 387-411 (477)
114 3icf_A PPT, serine/threonine-p 93.7 0.066 2.2E-06 54.7 5.6 23 399-421 237-259 (335)
115 3ll8_A Serine/threonine-protei 93.6 0.046 1.6E-06 56.3 4.3 37 210-246 71-108 (357)
116 1uem_A KIAA1568 protein; immun 93.6 0.16 5.5E-06 42.4 7.1 37 166-202 73-113 (117)
117 3up1_A Interleukin-7 receptor 93.5 0.43 1.5E-05 45.8 10.6 98 81-202 111-216 (223)
118 1bpv_A Titin, A71, connectin; 93.3 0.23 7.8E-06 42.0 7.5 24 166-189 69-92 (112)
119 1bqu_A Protein (GP130); cytoki 93.3 0.24 8.1E-06 46.0 8.4 96 83-201 104-206 (215)
120 2yuw_A Myosin binding protein 93.2 0.18 6.2E-06 41.7 6.7 23 165-187 65-87 (110)
121 1x5y_A Myosin binding protein 93.1 0.2 6.8E-06 41.6 6.8 78 84-186 10-87 (111)
122 3mpc_A FN3-like protein; fibro 93.0 0.69 2.4E-05 38.5 10.0 33 168-200 60-95 (103)
123 1cd9_B G-CSF-R, protein (G-CSF 92.9 0.53 1.8E-05 43.7 10.3 93 83-200 109-213 (215)
124 1i1r_A GP130, interleukin-6 re 92.7 0.41 1.4E-05 47.2 9.7 95 83-200 200-301 (303)
125 3n06_B PRL-R, prolactin recept 92.6 0.73 2.5E-05 42.7 10.7 94 83-199 103-203 (210)
126 1aui_A Calcineurin, serine/thr 92.4 0.088 3E-06 56.6 4.4 23 400-422 263-285 (521)
127 2b5i_B Interleukin-2 receptor 92.4 0.54 1.8E-05 44.5 9.6 96 84-202 107-209 (214)
128 3k2m_C Monobody HA4; engineere 92.2 0.55 1.9E-05 38.4 8.3 74 85-186 7-81 (101)
129 1eer_B Epobp, erythropoietin r 92.2 0.51 1.8E-05 44.7 9.3 92 83-198 122-221 (227)
130 2ibg_A CG9211-PA, GH03927P; IH 92.2 0.54 1.9E-05 43.4 9.2 35 166-200 175-212 (214)
131 1wfu_A Unnamed protein product 91.9 0.14 4.8E-06 44.1 4.4 37 166-202 76-115 (120)
132 3r8q_A Fibronectin; heparin, F 91.9 1.2 4E-05 43.3 11.8 91 83-202 21-113 (290)
133 1wj3_A KIAA1496 protein; beta 91.9 0.85 2.9E-05 38.5 9.3 36 166-202 74-112 (117)
134 1x5i_A Neogenin; RGM binding, 91.8 1.8 6E-05 36.8 11.4 89 85-202 30-120 (126)
135 1tdq_A Tenascin-R; extracellul 91.8 1.5 5.2E-05 42.2 12.3 91 84-201 106-198 (283)
136 3lpw_A A77-A78 domain from tit 91.7 0.48 1.6E-05 42.7 8.1 81 83-190 103-183 (197)
137 2ocf_D Fibronectin; estrogen r 91.3 0.56 1.9E-05 40.1 7.6 74 84-186 30-103 (121)
138 3l5i_A Interleukin-6 receptor 91.3 0.4 1.4E-05 46.6 7.6 36 165-200 253-290 (290)
139 1v5j_A KIAA1355 protein, RSGI 91.2 0.68 2.3E-05 38.9 7.9 93 84-203 9-104 (108)
140 1fnf_A Fibronectin; RGD, extra 91.2 0.73 2.5E-05 46.4 9.6 93 84-202 3-95 (368)
141 3p4l_A Neogenin; iron homeosta 91.2 0.53 1.8E-05 43.5 8.0 92 84-200 107-204 (211)
142 3fl7_A Ephrin receptor; ATP-bi 91.1 0.67 2.3E-05 50.4 9.8 37 166-202 496-535 (536)
143 3qwq_B Adnectin; cell surface 91.1 0.49 1.7E-05 40.0 7.0 71 85-185 6-77 (114)
144 1uey_A KIAA0343 protein; immun 91.1 1.2 4E-05 37.7 9.5 34 169-202 78-115 (127)
145 2d9q_B Granulocyte colony-stim 91.0 0.86 2.9E-05 45.1 9.8 94 83-201 203-308 (313)
146 2yrz_A Integrin beta-4; GP150, 90.9 1.5 5.1E-05 36.3 9.9 36 165-200 73-112 (118)
147 2qbw_A PDZ-fibronectin fusion 90.8 0.54 1.9E-05 43.5 7.6 22 165-186 157-178 (195)
148 3t1w_A Four-domain fibronectin 90.6 1 3.5E-05 45.4 10.1 91 84-201 4-95 (375)
149 1wf5_A Sidekick 2 protein; FNI 90.2 0.96 3.3E-05 37.7 8.0 37 165-201 76-116 (121)
150 3qht_C Monobody YSMB-1; fibron 90.0 0.61 2.1E-05 37.8 6.4 72 85-186 7-79 (97)
151 1tdq_A Tenascin-R; extracellul 89.9 2.1 7.1E-05 41.2 11.2 101 84-216 16-118 (283)
152 1cfb_A Drosophila neuroglian; 89.6 1.7 5.8E-05 39.7 10.0 91 85-202 8-103 (205)
153 2ic2_A CG9211-PA, GH03927P; IH 89.5 2.2 7.5E-05 35.9 9.7 23 164-186 70-92 (115)
154 3r8q_A Fibronectin; heparin, F 89.4 1.4 4.7E-05 42.8 9.6 88 84-201 114-203 (290)
155 2edb_A Netrin receptor DCC; tu 89.3 0.98 3.4E-05 37.9 7.4 88 85-201 20-109 (116)
156 1oww_A FN, fibronectin first t 89.2 2.2 7.4E-05 34.8 8.6 88 83-198 5-96 (98)
157 1j8k_A Fibronectin; EDA, TYPEI 88.4 0.84 2.9E-05 36.5 6.0 35 165-199 55-91 (94)
158 2jll_A NCAM2, neural cell adhe 88.2 2.1 7.3E-05 43.0 10.4 37 165-202 349-388 (389)
159 1wfn_A Sidekick 2; FN3, cell a 88.1 1.7 5.8E-05 36.1 8.1 23 165-187 74-96 (119)
160 2gee_A Hypothetical protein; f 88.0 1.8 6E-05 39.9 8.9 79 85-191 116-194 (203)
161 3t04_D Monobody 7C12; engineer 87.5 1.6 5.3E-05 35.8 7.3 76 85-186 10-85 (103)
162 2h41_A Fibronectin; beta sandw 87.4 0.53 1.8E-05 38.7 4.2 28 165-192 59-86 (95)
163 1ujt_A KIAA1568 protein; fibro 87.2 0.74 2.5E-05 39.4 5.2 38 165-202 75-115 (120)
164 2ekj_A Collagen alpha-1(XX) ch 86.7 0.24 8.1E-06 41.0 1.7 22 165-186 61-82 (105)
165 2q7n_A Leukemia inhibitory fac 86.6 0.96 3.3E-05 48.6 6.8 96 83-201 387-487 (488)
166 3v6o_A Leptin receptor; recept 86.1 2.3 7.7E-05 39.5 8.4 77 82-184 109-186 (206)
167 2vkw_A Neural cell adhesion mo 86.0 1.6 5.5E-05 40.0 7.3 33 165-197 165-200 (209)
168 2ha1_A Fibronectin; beta sandw 85.6 2.5 8.5E-05 38.5 8.3 88 85-200 2-93 (201)
169 1cfb_A Drosophila neuroglian; 85.5 4.3 0.00015 36.9 10.0 90 84-199 106-202 (205)
170 1n26_A IL-6 receptor alpha cha 85.4 3.8 0.00013 40.7 10.3 93 83-199 197-296 (325)
171 2w1n_A O-GLCNACASE NAGJ; hexos 84.5 3.7 0.00013 39.0 8.8 33 167-199 202-237 (238)
172 3csg_A MBP, maltose-binding pr 84.0 1.5 5E-05 46.2 6.7 74 85-186 372-445 (461)
173 1fnf_A Fibronectin; RGD, extra 83.9 3.1 0.00011 41.6 8.8 22 165-186 329-350 (368)
174 3t1w_A Four-domain fibronectin 83.7 3.8 0.00013 41.1 9.5 34 166-199 332-367 (375)
175 3e0g_A Leukemia inhibitory fac 83.6 0.96 3.3E-05 48.5 5.1 96 83-201 382-482 (483)
176 3f7q_A Integrin beta-4, GP150; 83.5 1 3.4E-05 42.5 4.7 38 165-202 160-201 (234)
177 3uto_A Twitchin; kinase, muscl 82.9 3.1 0.0001 45.5 8.9 69 97-191 23-91 (573)
178 3tgx_A Interleukin-21 receptor 82.0 4.9 0.00017 37.8 8.9 102 82-202 100-210 (219)
179 3s98_A Interferon alpha/beta r 81.3 10 0.00035 37.4 11.4 36 166-201 160-200 (306)
180 1zlg_A Anosmin 1; insulin-like 81.3 6.1 0.00021 43.9 10.7 34 166-199 224-261 (680)
181 3mtr_A N-CAM-1, NCAM-1, neural 81.0 1.2 4.2E-05 40.9 4.2 39 165-203 173-214 (215)
182 1axi_B HGHBP, growth hormone r 80.9 3.4 0.00012 39.4 7.4 35 165-199 195-234 (236)
183 3l5i_A Interleukin-6 receptor 80.9 15 0.00051 35.1 12.3 36 165-200 157-194 (290)
184 2ibg_A CG9211-PA, GH03927P; IH 80.0 6.7 0.00023 35.7 9.0 23 163-185 68-90 (214)
185 2erj_C Cytokine receptor commo 78.6 8.5 0.00029 37.0 9.5 89 83-201 137-234 (247)
186 3fl7_A Ephrin receptor; ATP-bi 78.1 5.6 0.00019 43.1 8.8 38 165-202 400-443 (536)
187 2b5i_C Cytokine receptor commo 77.9 8.1 0.00028 35.4 8.8 87 83-199 99-194 (199)
188 3l5h_A Interleukin-6 receptor 77.1 1.9 6.6E-05 46.4 4.8 97 83-202 199-302 (589)
189 3bpo_C Interleukin-13 receptor 76.4 6 0.00021 38.9 8.0 103 83-200 200-312 (314)
190 2v5y_A Receptor-type tyrosine- 75.0 12 0.00042 41.5 10.9 99 84-202 361-461 (731)
191 4go6_B HCF C-terminal chain 1; 74.1 2.5 8.5E-05 40.1 4.2 36 166-201 47-85 (232)
192 1iar_B Protein (interleukin-4 73.8 12 0.00042 34.5 9.0 100 81-201 96-201 (207)
193 2jll_A NCAM2, neural cell adhe 73.5 20 0.0007 35.5 11.2 37 165-201 252-291 (389)
194 1zlg_A Anosmin 1; insulin-like 72.7 18 0.00062 40.0 11.4 39 164-202 593-633 (680)
195 3se4_A Interferon alpha/beta r 70.7 21 0.00072 36.6 10.7 35 166-200 164-203 (414)
196 3flo_A DNA polymerase alpha su 69.9 7.5 0.00026 41.1 7.0 92 207-303 146-247 (460)
197 2gys_A Cytokine receptor commo 68.4 33 0.0011 35.1 11.6 113 82-216 108-229 (419)
198 4doh_R Interleukin-20 receptor 64.3 7.6 0.00026 36.6 5.2 38 165-202 173-215 (221)
199 3lqm_A Interleukin-10 receptor 60.0 7.4 0.00025 35.8 4.2 36 166-201 156-196 (201)
200 2ha1_A Fibronectin; beta sandw 59.0 7.5 0.00026 35.1 4.1 28 165-192 165-192 (201)
201 2nzi_A Titin; IG-domain, FNIII 55.6 28 0.00094 33.2 7.7 21 166-186 255-275 (305)
202 2dtg_E Insulin receptor; IR ec 54.0 6.4 0.00022 45.4 3.2 39 165-203 549-595 (897)
203 1q38_A Fibronectin; amyloid fi 53.3 8.9 0.00031 30.3 2.8 35 166-200 39-75 (89)
204 2v5y_A Receptor-type tyrosine- 52.0 62 0.0021 35.7 10.9 38 165-202 316-358 (731)
205 1bqu_A Protein (GP130); cytoki 49.3 22 0.00075 32.2 5.6 34 165-198 62-98 (215)
206 3b4n_A Endo-pectate lyase; pec 48.8 20 0.00067 36.0 5.2 17 170-186 76-92 (344)
207 2gys_A Cytokine receptor commo 44.2 8.6 0.00029 39.7 2.0 34 165-198 377-418 (419)
208 2uvf_A Exopolygalacturonase; G 44.0 21 0.00073 39.1 5.2 37 164-200 112-152 (608)
209 3lb6_C IL-13, interleukin-13 r 42.6 5.3 0.00018 41.0 0.0 35 167-201 292-336 (380)
210 4doh_B Interleukin-20 receptor 41.5 13 0.00043 34.5 2.5 35 166-200 161-200 (206)
211 3l5h_A Interleukin-6 receptor 39.0 5.9 0.0002 42.5 -0.3 35 165-199 552-588 (589)
212 2dtg_E Insulin receptor; IR ec 37.8 26 0.0009 40.2 4.9 37 165-201 747-789 (897)
213 2mcm_A Macromomycin; apoprotei 36.1 29 0.001 29.1 3.6 28 152-182 8-35 (112)
214 1noa_A Neocarzinostatin; antib 35.2 29 0.001 29.1 3.4 28 152-182 9-36 (113)
215 1i1r_A GP130, interleukin-6 re 30.9 56 0.0019 31.3 5.5 22 165-186 158-180 (303)
216 3se4_A Interferon alpha/beta r 27.2 13 0.00045 38.2 0.0 37 165-201 367-410 (414)
217 1cd9_B G-CSF-R, protein (G-CSF 27.0 1.9E+02 0.0065 25.7 8.1 96 84-198 6-103 (215)
218 3lb6_C IL-13, interleukin-13 r 25.5 5.1E+02 0.017 25.7 12.9 25 84-108 33-57 (380)
No 1
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=100.00 E-value=4.9e-69 Score=579.57 Aligned_cols=399 Identities=37% Similarity=0.687 Sum_probs=339.2
Q ss_pred CCCCCCCCCcccCCCCCCCCCeEEEEecCCC-CceEEEEEcC-cccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEE
Q 008343 67 AIDLPDTDPRVQRTVEGFEPEQISVSLSSAH-DSVWISWITG-EFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRS 144 (569)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~P~qi~ls~~~~p-~s~~I~W~T~-~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~ 144 (569)
++|+|.++|+++.+.....|+||||++++++ ++|+|+|+|. +. ...++|+|+++++.+..++.|++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~------------~~~~~V~y~~~~~~~~~~~~~~~ 73 (426)
T 1xzw_A 6 DVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDK------------AGANKVFYWSENSKSQKRAMGTV 73 (426)
T ss_dssp HHBCCTTCGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSCC------------TTTTEEEEEETTCCCCEEEECEE
T ss_pred cccCCCCCCcccCCCCCCCCceEEEEECCCCCCeEEEEEEeCCCC------------CCCCEEEEecCCCCCceEEEEEE
Confidence 6899999999998888899999999999987 9999999997 42 13579999999988888888887
Q ss_pred EEeeeecccCCccccccCeEEEEEeCCCCCCCEEEEEEecCCCCCccceeEEEcCCCCCCCCCCeEEEEEcccCCCCChH
Q 008343 145 LVYSQLYPFLGLQNYTSGIIHHVRLTGLKPDTLYHYQCGDPSIPAMSGTYCFRTMPDSSSTSYPSRIAIVGDVGLTYNTT 224 (569)
Q Consensus 145 ~~y~~~~p~~g~~~~~~~~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~P~~g~~~~~~rfavigD~g~~~~~~ 224 (569)
.+|+.. ++.++++|+|+|+||+|+|+|+|||+.+ .+|++++|+|+|.++.. .++||+++||+|......
T Consensus 74 ~~~~~~-------~~~~~~~~~v~l~gL~p~t~Y~Yrv~~g---~~s~~~~f~T~p~~~~~-~~~~f~~~gD~~~~~~~~ 142 (426)
T 1xzw_A 74 VTYKYY-------NYTSAFIHHCTIKDLEYDTKYYYRLGFG---DAKRQFWFVTPPKPGPD-VPYVFGLIGDIGQTHDSN 142 (426)
T ss_dssp ECCEET-------TEECCEEEEEEECCCCTTCEEEEEECCG---GGCEEEEEECCCCCCTT-CCEEEEEECSCTTBHHHH
T ss_pred EEEEec-------CCcCCEEEEEEECCCCCCCEEEEEECCC---CccceeEEECCCCCCCC-CCeEEEEEEeCCCCCchH
Confidence 776532 2457899999999999999999999873 58999999999986654 489999999999875556
Q ss_pred HHHHHHHhC--CCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHHhhhhhhccCCcEEecCCccc
Q 008343 225 STVSHMISN--RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEY 302 (569)
Q Consensus 225 ~~~~~l~~~--~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~~l~~l~~~~P~~~v~GNHD~ 302 (569)
.+++++.+. +|||||++||++|+++... ..+.+|+.|.+.++++.+.+|+|+++||||+
T Consensus 143 ~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~-------------------~~~~~~~~~~~~l~~l~~~~P~~~v~GNHD~ 203 (426)
T 1xzw_A 143 TTLTHYEQNSAKGQAVLFMGDLSYSNRWPN-------------------HDNNRWDTWGRFSERSVAYQPWIWTAGNHEI 203 (426)
T ss_dssp HHHHHHHHCTTCCSEEEECSCCCCGGGSGG-------------------GCTHHHHHHHHHHHHHHTTSCEECCCCGGGC
T ss_pred HHHHHHHhCCCCCCEEEeCCChhhcccCCc-------------------ccchHHHHHHHHHHHHHhcCCEEEecccccc
Confidence 778888876 8999999999999753210 0135789999999998889999999999999
Q ss_pred cccc---cchhhHHhhhccCCCCCCCCCCCceeEEEEeCcEEEEEEeccccCCCCHHHHHHHHHHHhccccCCCCEEEEE
Q 008343 303 EEQA---ENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFDKSGDQYKWLEEDLANVEREVTPWLVAT 379 (569)
Q Consensus 303 ~~~~---~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~LDt~~~~~~~~~Q~~WL~~~L~~~~~~~~~wvIv~ 379 (569)
.... ....+..|..+|.+|.++.+...+.||+|++|+++||+||++.++..+.+|++||+++|+++++++++|+||+
T Consensus 204 ~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~ 283 (426)
T 1xzw_A 204 DYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVL 283 (426)
T ss_dssp CCBGGGTBCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEE
T ss_pred ccCCccccccCChhheEEEeCCcccCCCCCCCeEEEEECCEEEEEeeCcccCCCCHHHHHHHHHHHHhhhhcCCCEEEEE
Confidence 7542 1246778999999998655556788999999999999999998777889999999999999877778999999
Q ss_pred eCCCccccCcccccchHHHHHHHHHHHHHcCCcEEEEccccCcceeeccccCc-----------cCCCCCeEEEECCCCc
Q 008343 380 WHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYT-----------LDPCGPVHITVGDGGN 448 (569)
Q Consensus 380 ~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~v~n~~-----------~~~~g~vyIv~G~gG~ 448 (569)
+|+|+|+....++.+...+|+.|+++|.+++|+++|+||+|.|+|++|+++.+ .+++|++||++|+||+
T Consensus 284 ~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~~~~~g~~yi~~G~gG~ 363 (426)
T 1xzw_A 284 VHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGN 363 (426)
T ss_dssp CSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCEECTTSCEEEEECCSCC
T ss_pred eccCceeCCCcccCCCHHHHHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccccCCccccccCCCccEEEEeCCCcc
Confidence 99999987654555567789999999999999999999999999999988765 3478999999999999
Q ss_pred cCCcCCCCCCCCCCCCCCCCCCCcccCCCcccccccccCCCCCCCCCCCCCCccceeeCCcceEEEEEecCCceEEEEEE
Q 008343 449 REKMAVPHADEPGNCPEPSTTPDKILGGGKFCGFNFTSGPASGKFCWDRQPDYSAFRESSFGHGILEVKNETHALWTWHR 528 (569)
Q Consensus 449 ~e~~~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~n~~~~p~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~ 528 (569)
.+.... . |. ..+|+||+|+..+|||++|+|.|+|+++|+|++
T Consensus 364 ~~~~~~-----------------~-----------~~----------~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~ 405 (426)
T 1xzw_A 364 SEGLAS-----------------E-----------MT----------QPQPSYSAFREASFGHGIFDIKNRTHAHFSWHR 405 (426)
T ss_dssp TTCCCC-----------------C-----------BC----------SSCCTTEEEEECCCEEEEEEECSSSEEEEEEEE
T ss_pred cccccc-----------------c-----------cC----------CCCCCceeEEecCCCeEEEEEEcCCeEEEEEEE
Confidence 875420 0 00 357999999999999999999999999999999
Q ss_pred ecCCcceeeEEEEEEeC
Q 008343 529 NQDFYEAAGDQIYIVRQ 545 (569)
Q Consensus 529 ~~~~~~~~~D~~~i~k~ 545 (569)
++|++..+.|+|||+|+
T Consensus 406 ~~dg~~~~~D~~~i~~~ 422 (426)
T 1xzw_A 406 NQDGASVEADSLWLLNR 422 (426)
T ss_dssp TTSCTTCCSEEEEEECS
T ss_pred CCCCCEEEeEEEEEEec
Confidence 99986669999999997
No 2
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=100.00 E-value=3.7e-67 Score=564.51 Aligned_cols=397 Identities=37% Similarity=0.685 Sum_probs=331.1
Q ss_pred CCCCCCCcccCCCCCCCCCeEEEEecCCC-CceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEe
Q 008343 69 DLPDTDPRVQRTVEGFEPEQISVSLSSAH-DSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVY 147 (569)
Q Consensus 69 ~~~~~~~~~~~~~~~~~P~qi~ls~~~~p-~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y 147 (569)
|+|.++++++.+.....|+||||++++++ ++|+|+|+|.+. ...++|+||++++.+..++.|++.+|
T Consensus 2 ~~~~~~~~~~~~~~~~~P~~v~l~~~~~~~~~~~v~W~t~~~------------~~~~~V~~~~~~~~~~~~~~g~~~~~ 69 (424)
T 2qfp_A 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDE------------PGSSAVRYWSEKNGRKRIAKGKMSTY 69 (424)
T ss_dssp BCCTTSGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSS------------CCCCCEEEEESSSCCCEEECCEEECC
T ss_pred CCCCCCCcccCCCCCCCCceEEEEecCCCCCeEEEEEECCCC------------CCCCEEEEEeCCCCCceEEEEEEEEE
Confidence 78999998888877779999999999876 899999999653 13578999999998888888887776
Q ss_pred eeecccCCccccccCeEEEEEeCCCCCCCEEEEEEecCCCCCccceeEEEcCCCCCCCCCCeEEEEEcccCCCCChHHHH
Q 008343 148 SQLYPFLGLQNYTSGIIHHVRLTGLKPDTLYHYQCGDPSIPAMSGTYCFRTMPDSSSTSYPSRIAIVGDVGLTYNTTSTV 227 (569)
Q Consensus 148 ~~~~p~~g~~~~~~~~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~P~~g~~~~~~rfavigD~g~~~~~~~~~ 227 (569)
+.. ++.++++|+|+|+||+|+|+|+|||+.+ .+|++++|+|+|.++.. .++||+++||+|.......++
T Consensus 70 ~~~-------~~~~~~~~~v~l~gL~p~t~Y~Yrv~~~---~~s~~~~f~T~p~~~~~-~~~~f~~igD~~~~~~~~~~l 138 (424)
T 2qfp_A 70 RFF-------NYSSGFIHHTTIRKLKYNTKYYYEVGLR---NTTRRFSFITPPQTGLD-VPYTFGLIGDLGQSFDSNTTL 138 (424)
T ss_dssp BCS-------SCBCCEEEEEEECSCCTTCEEEEEECCS---SSCEEEEEECCCCCCTT-CCEEEEEECSCTTBHHHHHHH
T ss_pred Eec-------CCCCCEEEEEEECCCCCCCEEEEEECCC---CccceEEEECCCCCCCC-CCeEEEEEEeCCCCCChHHHH
Confidence 531 2467899999999999999999999975 47899999999987654 489999999999875555677
Q ss_pred HHHHhC--CCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHHhhhhhhccCCcEEecCCcccccc
Q 008343 228 SHMISN--RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQ 305 (569)
Q Consensus 228 ~~l~~~--~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~~l~~l~~~~P~~~v~GNHD~~~~ 305 (569)
+++.+. ++||||++||++|++.+.. ....+|+.|.+.++++.+.+|+|+++||||+...
T Consensus 139 ~~~~~~~~~~D~vl~~GDl~y~~~~~~-------------------~~~~~~~~~~~~l~~~~~~~P~~~v~GNHD~~~~ 199 (424)
T 2qfp_A 139 SHYELSPKKGQTVLFVGDLSYADRYPN-------------------HDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFA 199 (424)
T ss_dssp HHHHTCSSCCCEEEECSCCSCGGGSGG-------------------GCTHHHHHHHHHHHHHHTTSCEEECCCHHHHCCB
T ss_pred HHHHhCCCCCCEEEEcCcccccccccc-------------------ccchHHHHHHHHHHHHHhcCCeEeecCCcccccC
Confidence 888765 8999999999999753210 0135788999999988888999999999999743
Q ss_pred cc---chhhHHhhhccCCCCCCCCCCCceeEEEEeCcEEEEEEeccccCCCCHHHHHHHHHHHhccccCCCCEEEEEeCC
Q 008343 306 AE---NRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFDKSGDQYKWLEEDLANVEREVTPWLVATWHA 382 (569)
Q Consensus 306 ~~---~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~LDt~~~~~~~~~Q~~WL~~~L~~~~~~~~~wvIv~~H~ 382 (569)
.. ...|..|..+|.+|........+.||+|++|+++||+||++..+....+|++||+++|+++++++++|+||++|+
T Consensus 200 ~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~ 279 (424)
T 2qfp_A 200 PEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHS 279 (424)
T ss_dssp GGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSS
T ss_pred CcccccccchhhhhhccCCccccCCCCCcEEEEEECCEEEEEecCCccCCCcHHHHHHHHHHHhhhcccCCCEEEEEeCc
Confidence 21 125778889999997654456788999999999999999987776677999999999999877778999999999
Q ss_pred CccccCcccccchHHHHHHHHHHHHHcCCcEEEEccccCcceeeccccCc-----------cCCCCCeEEEECCCCccCC
Q 008343 383 PWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYT-----------LDPCGPVHITVGDGGNREK 451 (569)
Q Consensus 383 P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~v~n~~-----------~~~~g~vyIv~G~gG~~e~ 451 (569)
|+++....++.+...+|+.|+++|.+++|+++|+||+|.|+|++|+++.. .+++|++||++|+||+.++
T Consensus 280 P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~vyi~~G~gg~~~~ 359 (424)
T 2qfp_A 280 PLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGV 359 (424)
T ss_dssp CSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEECCSCTTSC
T ss_pred CceecCcccccccHHHHHHHHHHHHHhCCcEEEECChhhhheeccccCcceeccCCccccccCCCCcEEEEecCCCCccc
Confidence 99987655555566789999999999999999999999999999886532 2567999999999999875
Q ss_pred cCCCCCCCCCCCCCCCCCCCcccCCCcccccccccCCCCCCCCCCCCCCccceeeCCcceEEEEEecCCceEEEEEEecC
Q 008343 452 MAVPHADEPGNCPEPSTTPDKILGGGKFCGFNFTSGPASGKFCWDRQPDYSAFRESSFGHGILEVKNETHALWTWHRNQD 531 (569)
Q Consensus 452 ~~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~n~~~~p~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~ 531 (569)
... +|+ .++|+||+|++.+|||++|+|.|+|++.|+|++++|
T Consensus 360 ~~~----------------------------~~~----------~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~ 401 (424)
T 2qfp_A 360 IDS----------------------------NMI----------QPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQD 401 (424)
T ss_dssp CCC----------------------------CBC----------SSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTS
T ss_pred cCc----------------------------cCC----------CCCCCcceEEecCCCEEEEEEEcCcEEEEEEEECCC
Confidence 420 011 357999999999999999999999999999999988
Q ss_pred CcceeeEEEEEEeC
Q 008343 532 FYEAAGDQIYIVRQ 545 (569)
Q Consensus 532 ~~~~~~D~~~i~k~ 545 (569)
+...+.|+|||+|+
T Consensus 402 g~~~~~D~~~i~~~ 415 (424)
T 2qfp_A 402 GVAVEADSVWFFNR 415 (424)
T ss_dssp CTTCCSEEEEEECT
T ss_pred CCEEeeeEEEEEec
Confidence 84335799999998
No 3
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=100.00 E-value=2.4e-39 Score=356.07 Aligned_cols=314 Identities=17% Similarity=0.214 Sum_probs=222.2
Q ss_pred CCC-CceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCc--eEEEeEEEEeeeecccCCccccccCeEEEEEeCC
Q 008343 95 SAH-DSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLN--RKATGRSLVYSQLYPFLGLQNYTSGIIHHVRLTG 171 (569)
Q Consensus 95 ~~p-~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~--~~~~g~~~~y~~~~p~~g~~~~~~~~~h~v~l~g 171 (569)
+|| ...+|.|++..+..-.. ..+ ...+.+|+|..+.+... .+..|...+. ...+++|+|+|+|
T Consensus 16 GDp~~~~vilWtr~~p~~~~~-~~~--~~~~~~v~~eva~d~~f~~~v~~g~~~a~-----------~~~~~t~~v~v~g 81 (527)
T 2yeq_A 16 GDPLSDSVVLWTRLAPDPLNG-GGM--PKQAVPVKWEVAKDEHFRKIVRKGTEMAK-----------PSLAHSVHVEADG 81 (527)
T ss_dssp ECCCSSCEEEEEECCSBGGGT-BCC--CSSCEEEEEEEESSTTSSSEEEEEEEEEC-----------GGGTTEEEEEECS
T ss_pred cCCCCCeEEEEEecCCcccCC-CCC--CCCceEEEEEEecCCccccceEeeeEEec-----------CCCceEEEeecCC
Confidence 566 45668899976521000 000 11346787877665543 4445554332 1357999999999
Q ss_pred CCCCCEEEEEEecCCCCCccceeEEEcCCCCCCCCCCeEEEEEcccCCCCChHHHHHHHHhCCCCEEEEcCCcccccccc
Q 008343 172 LKPDTLYHYQCGDPSIPAMSGTYCFRTMPDSSSTSYPSRIAIVGDVGLTYNTTSTVSHMISNRPDLILLVGDVTYANLYL 251 (569)
Q Consensus 172 L~P~T~Y~Yrvg~~~~~~~S~~~~F~T~P~~g~~~~~~rfavigD~g~~~~~~~~~~~l~~~~pDfvl~~GDl~Y~d~~~ 251 (569)
|+|+|+|+|||+.++ .+|++++|+|+|.++....++||+++||.+.......++++|.+.+||||||+||++|++...
T Consensus 82 L~P~t~Y~Yr~~~~~--~~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~g~~~~~~~ia~~~~D~vlhlGD~iY~d~~~ 159 (527)
T 2yeq_A 82 LEPNKVYYYRFKTGH--ELSPVGKTKTLPAPGANVPQMTFAFASCQQYEHGYYTAYKHMAKEKLDLVFHLGDYIYEYGPN 159 (527)
T ss_dssp CCTTCEEEEEEEETT--EECCCEEEECCCCTTCCCCCEEEEEECCCCGGGCCCHHHHHHTTSCCSEEEECSCSSCCCCTT
T ss_pred cCCCCEEEEEEEeCC--CcCCCceEEcCCCCCCCCCCeEEEEEecCCCCCCccHHHHHHHhcCCCEEEecCCcccCCCCC
Confidence 999999999999875 789999999999887654589999999998754556788888888999999999999997532
Q ss_pred cCCCCCccccccCC-CCCCccchhHHHHHHH--HhhhhhhccCCcEEecCCccccccccc-----------------hhh
Q 008343 252 TNGTGSDCYACSFA-NSPIHETYQPRWDYWG--RYMQPVLSKVPIMVVEGNHEYEEQAEN-----------------RTF 311 (569)
Q Consensus 252 ~~G~~~~~~~~~~~-~~~~~e~Y~~~wd~~~--~~l~~l~~~~P~~~v~GNHD~~~~~~~-----------------~~~ 311 (569)
..+.....-+.... +....+.|+.+|..+. ..++.+.+.+|+|+++||||+.++... ..+
T Consensus 160 ~~~~~~~~~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A~ 239 (527)
T 2yeq_A 160 EYVSKTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAY 239 (527)
T ss_dssp SSCCTTCCCSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHHH
T ss_pred cccccccccccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccccCCCCCCcccccCCcccHHHHHHHHH
Confidence 11100000010000 1112346777777765 347788889999999999999865321 134
Q ss_pred HHhhhccCCCCCC--CCCCCceeEEEEeCc-EEEEEEeccccCC----------------------CCHHHHHHHHHHHh
Q 008343 312 VAYTSRFAFPSKE--SGSLSKFYYSFNAGG-IHFLMLAAYVSFD----------------------KSGDQYKWLEEDLA 366 (569)
Q Consensus 312 ~~y~~~f~~P~~~--~~~~~~~yYsf~~G~-v~fI~LDt~~~~~----------------------~~~~Q~~WL~~~L~ 366 (569)
.+|.++++++... .+.....||+|++|+ ++||+|||+.... .+.+|++||+++|+
T Consensus 240 ~ay~e~~P~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L~ 319 (527)
T 2yeq_A 240 QAYYEHMPLRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLG 319 (527)
T ss_dssp HHHHHHSCCCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHHH
T ss_pred HHHHHhCCCCcccCCCCCCceEEEEEEcCCcceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHHh
Confidence 4555544443211 123457899999999 9999999975321 36899999999999
Q ss_pred ccccCCCCEEEEEeCCCccccCc----------ccccchHHHHHHHHHHHHHcCCc--EEEEccccCcceeec
Q 008343 367 NVEREVTPWLVATWHAPWYSTYK----------AHYREAECMRVAMEDLLYKYGVD--VVFNGHVHAYERSNR 427 (569)
Q Consensus 367 ~~~~~~~~wvIv~~H~P~y~s~~----------~~~~~~~~~r~~l~~ll~~~~Vd--lvlsGH~H~yeR~~~ 427 (569)
+ ++++|+||++|+|++.... ..|......|++|+++|.+++|+ +||+||+|.+++...
T Consensus 320 ~---s~a~W~Iv~s~~p~~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~~~~ 389 (527)
T 2yeq_A 320 S---STAHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWASNL 389 (527)
T ss_dssp H---CCSSEEEEECSSCCSCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEEEEEE
T ss_pred c---CCCCeEEEEeCCcccccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHhHhhc
Confidence 8 4578999999999987532 23444566799999999999984 999999999999864
No 4
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=9.2e-34 Score=295.07 Aligned_cols=253 Identities=17% Similarity=0.231 Sum_probs=182.4
Q ss_pred CeEEEEEcccCCCCChHHHH-H----HHHhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHH-HH
Q 008343 208 PSRIAIVGDVGLTYNTTSTV-S----HMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDY-WG 281 (569)
Q Consensus 208 ~~rfavigD~g~~~~~~~~~-~----~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~-~~ 281 (569)
++||+++||+|.+...+..+ + .+.+.+|||||++||++|. |... ....+|.. |.
T Consensus 3 ~l~f~~igD~g~g~~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~------G~~~--------------~~d~~~~~~f~ 62 (342)
T 3tgh_A 3 QLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFID------GVKG--------------LNDPAWKNLYE 62 (342)
T ss_dssp CEEEEECCSCBSCCHHHHHHHHHHHHHHHHTTCCEEEECSCSBTT------CCCS--------------TTCTHHHHHTT
T ss_pred eEEEEEEecCCCCCchHHHHHHHHHHHHhhcCCCEEEECCCcccC------CCCc--------------CccHHHHHHHH
Confidence 68999999999865443322 2 2335799999999999985 2100 01234543 22
Q ss_pred Hhhhhh--hccCCcEEecCCccccccccch-hhHH-------------------hhhccCCCCCCCCCCCceeEEE----
Q 008343 282 RYMQPV--LSKVPIMVVEGNHEYEEQAENR-TFVA-------------------YTSRFAFPSKESGSLSKFYYSF---- 335 (569)
Q Consensus 282 ~~l~~l--~~~~P~~~v~GNHD~~~~~~~~-~~~~-------------------y~~~f~~P~~~~~~~~~~yYsf---- 335 (569)
+.++.+ ..++||++++||||+..+...+ .+.. ...||.||. .||+|
T Consensus 63 ~~~~~~~~~~~~P~~~vlGNHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~--------~yY~~~~~f 134 (342)
T 3tgh_A 63 DVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPN--------YWYHYFTHF 134 (342)
T ss_dssp TTSCCGGGTTCSEEEECCCHHHHTSCHHHHHHHHHC---------------CCCSSCEEECSS--------SSEEEEEEE
T ss_pred HHhhhhhhhhCCCEEEeCCCCccCCCchHhhhhhhcccccccccccccccccccCCCCccCCc--------ceEEEEEEe
Confidence 333332 3579999999999998543211 1111 223455553 57765
Q ss_pred Ee---------C----cEEEEEEeccccCC----------CCHHHHHHHHHHHhccccCCCCEEEEEeCCCccccCcccc
Q 008343 336 NA---------G----GIHFLMLAAYVSFD----------KSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHY 392 (569)
Q Consensus 336 ~~---------G----~v~fI~LDt~~~~~----------~~~~Q~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~ 392 (569)
.. | .++||+|||..... ...+|++||+++|++ ++|+||++|||+|++...
T Consensus 135 ~~~~~~~~~~~g~~~~~v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~~~~~~~-- 207 (342)
T 3tgh_A 135 TVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPIYSSGYS-- 207 (342)
T ss_dssp EEC---------CEEEEEEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCSSCSSTT--
T ss_pred eccccccccccCCCCceEEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCCCCCCCC--
Confidence 32 3 49999999964321 135899999999943 479999999999987532
Q ss_pred cchHHHHHHHHHHHHHcCCcEEEEccccCcceeeccccCccCCCCCeEEEECCCCccCCcCCCCCCCCCCCCCCCCCCCc
Q 008343 393 REAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCGPVHITVGDGGNREKMAVPHADEPGNCPEPSTTPDK 472 (569)
Q Consensus 393 ~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~v~n~~~~~~g~vyIv~G~gG~~e~~~~~~~d~~~~~p~~~~~~~~ 472 (569)
.....+++.|+++|.+|+|+++|+||+|.|+|..+ +|+.||++|+||......
T Consensus 208 ~~~~~l~~~l~~ll~~~~VdlvlsGH~H~~~~~~~--------~g~~~iv~Ga~g~~~~~~------------------- 260 (342)
T 3tgh_A 208 RGSSYLAYYLLPLLKDAEVDLYISGHDNNMEVIED--------NDMAHITCGSGSMSQGKS------------------- 260 (342)
T ss_dssp CCCHHHHHHTHHHHHHTTCCEEEECSSSSEEEEEE--------TTEEEEEECCSSCCCCCC-------------------
T ss_pred CCcHHHHHHHHHHHHHcCCCEEEECCCcceeEEee--------CCcEEEEeCccccccccC-------------------
Confidence 23456789999999999999999999999999863 579999999998753210
Q ss_pred ccCCCcccccccccCCCCCCCCCCCCCCccceeeCCcceEEEEEecCCceEEEEEEecCCcceeeEEEEEEeCCCC
Q 008343 473 ILGGGKFCGFNFTSGPASGKFCWDRQPDYSAFRESSFGHGILEVKNETHALWTWHRNQDFYEAAGDQIYIVRQPDL 548 (569)
Q Consensus 473 ~~~~~~~~~~n~~~~p~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~~~~~~~D~~~i~k~~~~ 548 (569)
...++|++|+...+||.+|++ +++.+.++|+.+.+| +++|+++|.|++..
T Consensus 261 -----------------------~~~~~~s~f~~~~~Gf~~l~v-~~~~l~~~~~~~~~G--~vld~~~i~k~~~~ 310 (342)
T 3tgh_A 261 -----------------------GMKNSKSLFFSSDIGFCVHEL-SNNGIVTKFVSSKKG--EVIYTHKLNIKKKK 310 (342)
T ss_dssp -----------------------SSCCTTEEEEECSSEEEEEEE-ETTEEEEEEEETTTT--EEEEEEEEECCCCS
T ss_pred -----------------------CCCCCcceeecCCCcEEEEEE-ECCEEEEEEEECCCC--cEEEEEEEECCCCc
Confidence 023568899999999999999 678899999975666 99999999998664
No 5
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=99.97 E-value=4.6e-29 Score=254.53 Aligned_cols=257 Identities=19% Similarity=0.259 Sum_probs=173.1
Q ss_pred CeEEEEEcccCCCCC-------h---HHHHHH-HHhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHH
Q 008343 208 PSRIAIVGDVGLTYN-------T---TSTVSH-MISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPR 276 (569)
Q Consensus 208 ~~rfavigD~g~~~~-------~---~~~~~~-l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~ 276 (569)
++||+++||+|.... . .+.+.+ +.+.+|||||++||++|.++....+ ..+
T Consensus 6 ~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~-------------------~~~ 66 (313)
T 1ute_A 6 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAK-------------------DKR 66 (313)
T ss_dssp CEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTT-------------------CTH
T ss_pred ceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcc-------------------hHH
Confidence 799999999998742 1 122333 3346899999999999864221000 112
Q ss_pred HHHH-HHhhhhhhc-cCCcEEecCCccccccccch-hhHHhhhccCCCCCCCCCCCceeEEEEe------CcEEEEEEec
Q 008343 277 WDYW-GRYMQPVLS-KVPIMVVEGNHEYEEQAENR-TFVAYTSRFAFPSKESGSLSKFYYSFNA------GGIHFLMLAA 347 (569)
Q Consensus 277 wd~~-~~~l~~l~~-~~P~~~v~GNHD~~~~~~~~-~~~~y~~~f~~P~~~~~~~~~~yYsf~~------G~v~fI~LDt 347 (569)
|... .+.++.... .+|+++++||||+....... .+.....+|.+| ..||+|.+ ++++||+||+
T Consensus 67 ~~~~~~~~~~~~~l~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~lds 138 (313)
T 1ute_A 67 FQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFMLDT 138 (313)
T ss_dssp HHHHTTTTSCSGGGTTCCEEECCCHHHHHSCHHHHHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEECCH
T ss_pred HHHHHHHHcCchhhcCCCEEEECCCCccCCCccccccccccCCCccCc--------ccceEEEEecCCCCceEEEEEEEC
Confidence 2222 122221112 79999999999986432110 111122334343 35888888 5899999998
Q ss_pred cccC-----------------CCCHHHHHHHHHHHhccccCCCCEEEEEeCCCccccCcccccchHHHHHHHHHHHHHcC
Q 008343 348 YVSF-----------------DKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYG 410 (569)
Q Consensus 348 ~~~~-----------------~~~~~Q~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~ 410 (569)
.... ..+.+|++||+++|++.. .+|+|+++|+|++..... ....++++.|.++|.+++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~wL~~~L~~~~---~~~~iv~~H~p~~~~~~~--~~~~~~~~~l~~~l~~~~ 213 (313)
T 1ute_A 139 VTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAAK---EDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTHK 213 (313)
T ss_dssp HHHHCCGGGSTTCSCCSCSCHHHHHHHHHHHHHHHHHCC---CSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHTT
T ss_pred hHHhCcCccccccccCCccccchHHHHHHHHHHHHHhCC---CCeEEEEECCCCccCCCC--CCcHHHHHHHHHHHHHcC
Confidence 6411 125799999999999863 479999999999986532 123466789999999999
Q ss_pred CcEEEEccccCcceeeccccCccCCCCCeEEEECCCCccCCcCCCCCCCCCCCCCCCCCCCcccCCCcccccccccCCCC
Q 008343 411 VDVVFNGHVHAYERSNRVYNYTLDPCGPVHITVGDGGNREKMAVPHADEPGNCPEPSTTPDKILGGGKFCGFNFTSGPAS 490 (569)
Q Consensus 411 VdlvlsGH~H~yeR~~~v~n~~~~~~g~vyIv~G~gG~~e~~~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~n~~~~p~~ 490 (569)
|+++|+||+|.+++..+ .+|+.||++|++|....... +.+ .
T Consensus 214 v~~~l~GH~H~~~~~~~-------~~g~~~i~~gs~~~~~~~~~-~~~---~---------------------------- 254 (313)
T 1ute_A 214 VTAYLCGHDHNLQYLQD-------ENGLGFVLSGAGNFMDPSKK-HLR---K---------------------------- 254 (313)
T ss_dssp CSEEEECSSSSEEEEEC-------TTCCEEEEECBSSCCCCCCT-TGG---G----------------------------
T ss_pred CcEEEECChhhhhhccC-------CCCceEEEECCCcCcCcccc-ccc---c----------------------------
Confidence 99999999999998852 46899999999987432110 000 0
Q ss_pred CCCCCCCCCCccceeeC----CcceEEEEEecCCceEEEEEEecCCcceeeEEEEEEeC
Q 008343 491 GKFCWDRQPDYSAFRES----SFGHGILEVKNETHALWTWHRNQDFYEAAGDQIYIVRQ 545 (569)
Q Consensus 491 ~~~~~~~~p~~s~~~~~----~~G~~~l~v~n~t~~~~~~~~~~~~~~~~~D~~~i~k~ 545 (569)
..+.++.|... .+||++|+| +++.+.++|+.. ++ ++.|+++|.|.
T Consensus 255 ------~~~~~~~~~~~~~~~~~gy~~l~v-~~~~~~~~~~~~-~g--~~~~~~~l~~~ 303 (313)
T 1ute_A 255 ------VPNGYLRFHFGAENSLGGFAYVEI-TPKEMSVTYIEA-SG--KSLFKTKLPRR 303 (313)
T ss_dssp ------SCTTCEEEEECCTTSCCEEEEEEE-CSSCEEEEEEET-TS--CEEEEEEECCC
T ss_pred ------CCCcccceeccCcCCCCceEEEEE-EcCEEEEEEEcC-CC--cEEEEEEeccc
Confidence 00123344332 389999999 677899999966 44 89999999876
No 6
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=99.89 E-value=4.2e-22 Score=205.22 Aligned_cols=197 Identities=17% Similarity=0.203 Sum_probs=136.8
Q ss_pred CCeEEEEEcccCCCCC-------------hHHHHHHHHh--CCCCEEEEcCCcccccccccCCCCCccccccCCCCCCcc
Q 008343 207 YPSRIAIVGDVGLTYN-------------TTSTVSHMIS--NRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHE 271 (569)
Q Consensus 207 ~~~rfavigD~g~~~~-------------~~~~~~~l~~--~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e 271 (569)
.++||++++|+|.... ...+++.+.+ .++|+||++||+++. |.
T Consensus 24 ~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~------~~---------------- 81 (330)
T 3ib7_A 24 PDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADK------GE---------------- 81 (330)
T ss_dssp CSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTT------CC----------------
T ss_pred CCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCC------CC----------------
Confidence 3799999999997421 1234555665 689999999999952 22
Q ss_pred chhHHHHHHHHhhhhhh--ccCCcEEecCCccccccccchhhHHhhhccCCCCCCCCCCCceeEEEEeCcEEEEEEeccc
Q 008343 272 TYQPRWDYWGRYMQPVL--SKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYV 349 (569)
Q Consensus 272 ~Y~~~wd~~~~~l~~l~--~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~LDt~~ 349 (569)
...|..+.+.++.+. .++|+++++||||+.. .+........ ......+|++++++++||+||+..
T Consensus 82 --~~~~~~~~~~l~~l~~~~~~pv~~v~GNHD~~~-----~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~lds~~ 148 (330)
T 3ib7_A 82 --PAAYRKLRGLVEPFAAQLGAELVWVMGNHDDRA-----ELRKFLLDEA------PSMAPLDRVCMIDGLRIIVLDTSV 148 (330)
T ss_dssp --HHHHHHHHHHHHHHHHHHTCEEEECCCTTSCHH-----HHHHHHHCCC------CCCSCCCEEEEETTEEEEECCCCC
T ss_pred --HHHHHHHHHHHHHHHhhcCCCEEEeCCCCCCHH-----HHHHHhcccc------cccCCcceEEEeCCEEEEEecCCC
Confidence 134455556666553 2789999999999841 2222221111 123467899999999999999874
Q ss_pred c----CCCCHHHHHHHHHHHhccccCCCCEEEEEeCCCccccCcccccc-hHHHHHHHHHHHHHcCCcEEEEccccCcce
Q 008343 350 S----FDKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYRE-AECMRVAMEDLLYKYGVDVVFNGHVHAYER 424 (569)
Q Consensus 350 ~----~~~~~~Q~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~-~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR 424 (569)
. .....+|++||++.|++.... ++|+++|||++......... ....++.+.+++.+++++++|+||+|..+.
T Consensus 149 ~~~~~~~~~~~q~~wl~~~l~~~~~~---~~iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~ 225 (330)
T 3ib7_A 149 PGHHHGEIRASQLGWLAEELATPAPD---GTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTN 225 (330)
T ss_dssp TTCCSBCCCHHHHHHHHHHTTSCCTT---CEEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEE
T ss_pred CCCCCCccCHHHHHHHHHHHHhcccC---CeEEEEECCCCCCCccccccccccCHHHHHHHHhccCceEEEECCCCCccc
Confidence 3 235789999999999986433 26778888877653221110 112357788999999999999999999876
Q ss_pred eeccccCccCCCCCeEEEECCCCcc
Q 008343 425 SNRVYNYTLDPCGPVHITVGDGGNR 449 (569)
Q Consensus 425 ~~~v~n~~~~~~g~vyIv~G~gG~~ 449 (569)
.. -+|+.+++.|+.+..
T Consensus 226 ~~--------~~g~~~~~~gs~~~~ 242 (330)
T 3ib7_A 226 AT--------FVGIPVSVASATCYT 242 (330)
T ss_dssp EE--------ETTEEEEECCCSSCE
T ss_pred ce--------ECCEEEEecCcceec
Confidence 53 357888888887753
No 7
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=99.87 E-value=8.1e-21 Score=190.19 Aligned_cols=193 Identities=16% Similarity=0.211 Sum_probs=129.6
Q ss_pred eEEEEEcccCCCC---------Ch----HHHHHHHHhC--CCCEEEEcCCcccccccccCCCCCccccccCCCCCCccch
Q 008343 209 SRIAIVGDVGLTY---------NT----TSTVSHMISN--RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETY 273 (569)
Q Consensus 209 ~rfavigD~g~~~---------~~----~~~~~~l~~~--~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y 273 (569)
+||++++|+|... .. .++++.+.+. ++|+||++||+++. |.
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~------~~------------------ 56 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNC------GR------------------ 56 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSS------CC------------------
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCC------CC------------------
Confidence 5899999999874 11 2344555554 68999999999952 22
Q ss_pred hHHHHHHHHhhhhhhccCCcEEecCCccccccccchhhHHhhhcc-CCCCCCCCCCCceeEEEEeCcEEEEEEecccc--
Q 008343 274 QPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRF-AFPSKESGSLSKFYYSFNAGGIHFLMLAAYVS-- 350 (569)
Q Consensus 274 ~~~wd~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f-~~P~~~~~~~~~~yYsf~~G~v~fI~LDt~~~-- 350 (569)
...|+.+.+.++.+ ++|+++++||||..... ...+...| .++.+ .+..+|+++.++++||+||+...
T Consensus 57 ~~~~~~~~~~l~~l--~~p~~~v~GNHD~~~~~----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~ld~~~~~~ 126 (274)
T 3d03_A 57 PEEYQVARQILGSL--NYPLYLIPGNHDDKALF----LEYLQPLCPQLGSD----ANNMRCAVDDFATRLLFIDSSRAGT 126 (274)
T ss_dssp HHHHHHHHHHHTTC--SSCEEEECCTTSCHHHH----HHHHGGGSGGGCSC----GGGCCEEECSSSSEEEECCCCCTTC
T ss_pred HHHHHHHHHHHHhc--CCCEEEECCCCCCHHHH----HHHhhhhhcCcccC----CCceEEEEEeCCEEEEEEeCCCCCC
Confidence 13455566666666 78999999999985321 11122211 11110 02467899999999999998743
Q ss_pred --CCCCHHHHHHHHHHHhccccCCCCEEEEEeCCCccccCcccccc-hHHHHHHHHHHHHHc-CCcEEEEccccCcceee
Q 008343 351 --FDKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYRE-AECMRVAMEDLLYKY-GVDVVFNGHVHAYERSN 426 (569)
Q Consensus 351 --~~~~~~Q~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~-~~~~r~~l~~ll~~~-~VdlvlsGH~H~yeR~~ 426 (569)
.....+|++||++.|++.. ..++|+++|+|++......... ....++.+.+++.++ +|+++|+||+|..+...
T Consensus 127 ~~~~~~~~~~~wl~~~l~~~~---~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~ 203 (274)
T 3d03_A 127 SKGWLTDETISWLEAQLFEGG---DKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQ 203 (274)
T ss_dssp SSBCCCHHHHHHHHHHHHHHT---TSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEE
T ss_pred CCCeeCHHHHHHHHHHHHhCC---CCCEEEEECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCchhhe
Confidence 2346899999999999852 3468999999998753211110 011246788999999 89999999999987753
Q ss_pred ccccCccCCCCCeEEEECCC
Q 008343 427 RVYNYTLDPCGPVHITVGDG 446 (569)
Q Consensus 427 ~v~n~~~~~~g~vyIv~G~g 446 (569)
.+|+.++++++.
T Consensus 204 --------~~g~~~~~~pg~ 215 (274)
T 3d03_A 204 --------YRQALISTLPGT 215 (274)
T ss_dssp --------ETTEEEEECCCS
T ss_pred --------ECCEEEEEcCCc
Confidence 246556555443
No 8
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=99.86 E-value=2.9e-21 Score=197.28 Aligned_cols=206 Identities=19% Similarity=0.186 Sum_probs=133.8
Q ss_pred CeEEEEEcccCCCCC--------------------hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCccccccCCCC
Q 008343 208 PSRIAIVGDVGLTYN--------------------TTSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANS 267 (569)
Q Consensus 208 ~~rfavigD~g~~~~--------------------~~~~~~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~ 267 (569)
++||++++|+|.... ..++++.+.+.+||+||++||+++.....
T Consensus 5 ~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~---------------- 68 (322)
T 2nxf_A 5 VFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRR---------------- 68 (322)
T ss_dssp SEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHH----------------
T ss_pred ceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCc----------------
Confidence 699999999998752 12334455567899999999999642100
Q ss_pred CCccchhHHHHHHHHhhhhhhccCCcEEecCCccccccccchhhHHhhhccCCCCCC--------CCCCCceeEEEEe-C
Q 008343 268 PIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKE--------SGSLSKFYYSFNA-G 338 (569)
Q Consensus 268 ~~~e~Y~~~wd~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~--------~~~~~~~yYsf~~-G 338 (569)
.......++.+.+.++.+ .+|+++++||||...... ..+...+..+... ....+..||+|+. +
T Consensus 69 --~~~~~~~~~~~~~~l~~~--~~p~~~v~GNHD~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~ 140 (322)
T 2nxf_A 69 --RDASDRALDTVMAELDAC--SVDVHHVWGNHEFYNFSR----PSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAP 140 (322)
T ss_dssp --TTCHHHHHHHHHHHHHTT--CSEEEECCCHHHHHHCCH----HHHHTSTTCCCC------CEECGGGTCCCEEEEEET
T ss_pred --chHHHHHHHHHHHHHHhc--CCcEEEecCCCCcccCCH----HHHhhhhCCcccccccccccccCCCCceEEEEecCC
Confidence 000011223333344433 689999999999952111 2333333211000 0002357899998 8
Q ss_pred cEEEEEEecccc----------------------------------------------CCCCHHHHHHHHHHHhccccCC
Q 008343 339 GIHFLMLAAYVS----------------------------------------------FDKSGDQYKWLEEDLANVEREV 372 (569)
Q Consensus 339 ~v~fI~LDt~~~----------------------------------------------~~~~~~Q~~WL~~~L~~~~~~~ 372 (569)
+++||+||+... .....+|++||+++|+++.+..
T Consensus 141 ~~~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~~ 220 (322)
T 2nxf_A 141 NFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQ 220 (322)
T ss_dssp TEEEEECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHHT
T ss_pred CEEEEEEcCceecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHhcC
Confidence 999999998641 1124899999999999875322
Q ss_pred CCEEEEEeCCCccccCcccccchHHHHHHHHHHHHHc-CCcEEEEccccCcceeeccccCccCCCCCeEEEECCC
Q 008343 373 TPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKY-GVDVVFNGHVHAYERSNRVYNYTLDPCGPVHITVGDG 446 (569)
Q Consensus 373 ~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~yeR~~~v~n~~~~~~g~vyIv~G~g 446 (569)
.++||++|+|++....... .....++.+.+++.++ +|+++|+||+|.+++.. +.+|+.|+++|+.
T Consensus 221 -~~~iv~~H~p~~~~~~~~~-~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~-------~~~g~~~i~~~~~ 286 (322)
T 2nxf_A 221 -ERVLIFSHLPVHPCAADPI-CLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCT-------DSSGAQHITLEGV 286 (322)
T ss_dssp -CEEEEEESSCCCTTSSCGG-GSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEE-------CTTSCEEEECCCG
T ss_pred -CcEEEEEccCCCCCCCCcc-ccccCHHHHHHHHhcCCCeEEEEcCCcCCCCcee-------ccCCceEEEecch
Confidence 3689999999987643210 0111357788999999 79999999999999874 2457888877655
No 9
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=99.79 E-value=7.7e-18 Score=181.25 Aligned_cols=194 Identities=16% Similarity=0.243 Sum_probs=124.0
Q ss_pred CCeEEEEEcccCCCCC-----------------------hHH----HHHHHHhCCCCEEEEcCCcccccccccCCCCCcc
Q 008343 207 YPSRIAIVGDVGLTYN-----------------------TTS----TVSHMISNRPDLILLVGDVTYANLYLTNGTGSDC 259 (569)
Q Consensus 207 ~~~rfavigD~g~~~~-----------------------~~~----~~~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~ 259 (569)
.++||++++|+|.... ... +++.+.+.+||+||++||+++. |.
T Consensus 38 ~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~------~~---- 107 (443)
T 2xmo_A 38 RNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNN------GE---- 107 (443)
T ss_dssp CCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSS------CC----
T ss_pred CCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCC------CC----
Confidence 3799999999998532 122 3344455689999999999952 22
Q ss_pred ccccCCCCCCccchhHHHHHHHHhhhhhh-ccCCcEEecCCccccccccc------------hhhHHhhhccCCCCCC--
Q 008343 260 YACSFANSPIHETYQPRWDYWGRYMQPVL-SKVPIMVVEGNHEYEEQAEN------------RTFVAYTSRFAFPSKE-- 324 (569)
Q Consensus 260 ~~~~~~~~~~~e~Y~~~wd~~~~~l~~l~-~~~P~~~v~GNHD~~~~~~~------------~~~~~y~~~f~~P~~~-- 324 (569)
...++.+.+.++.+. ..+|+++++||||+...... .....|...|.-....
T Consensus 108 --------------~~~~~~~~~~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (443)
T 2xmo_A 108 --------------KTSHEELAKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDA 173 (443)
T ss_dssp --------------HHHHHHHHHHHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCCTTC
T ss_pred --------------HHHHHHHHHHHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcChhhh
Confidence 123344455555553 37899999999998642110 0112333333211100
Q ss_pred --CCCCCceeEEEEeCcEEEEEEecccc------------CCCCHHHHHHHHHHHhccccCCCCEEEEEeCCCccccCcc
Q 008343 325 --SGSLSKFYYSFNAGGIHFLMLAAYVS------------FDKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKA 390 (569)
Q Consensus 325 --~~~~~~~yYsf~~G~v~fI~LDt~~~------------~~~~~~Q~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~ 390 (569)
.......|+.+..++++||+||+... .....+|++||++.|+++.+.. ..+|+++|+|++.....
T Consensus 174 ~~~~~~~~~y~~~~~~~~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~~~-~~~Iv~~H~p~~~~~~~ 252 (443)
T 2xmo_A 174 ISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNG-AKLIPVLHHNLTDHNDV 252 (443)
T ss_dssp SEECSSSSCEEECSBSSEEEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHHTT-CEEEEECSSBSSCSSCC
T ss_pred hccCCCCceEEEecCCCEEEEEeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHHcC-CeEEEEECCCCcccccc
Confidence 00112334445578999999999742 2346899999999999875433 45899999998765321
Q ss_pred cccc-hHHHHHHHHHHHHHcCCcEEEEccccCccee
Q 008343 391 HYRE-AECMRVAMEDLLYKYGVDVVFNGHVHAYERS 425 (569)
Q Consensus 391 ~~~~-~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~ 425 (569)
.... ....++.+.+++.+++|+++|+||+|.....
T Consensus 253 ~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~~~ 288 (443)
T 2xmo_A 253 IQKGYTINYNQQVIDALTEGAMDFSLSGHIHTQNIR 288 (443)
T ss_dssp --CCSBCTTHHHHHHHHHHTTCCEEEECSSCSCEEE
T ss_pred cccccccccHHHHHHHHHHcCCeEEEECCcccCchh
Confidence 1100 0113567889999999999999999997664
No 10
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=99.47 E-value=3.5e-13 Score=133.76 Aligned_cols=200 Identities=12% Similarity=0.199 Sum_probs=101.4
Q ss_pred CeEEEEEcccCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHH----HHHHHH
Q 008343 208 PSRIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPR----WDYWGR 282 (569)
Q Consensus 208 ~~rfavigD~g~~~~~-~~~~~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~----wd~~~~ 282 (569)
++||+++||+|..... ...++.+.+.++|+||++||++....... .....+..... |..+.|+.. .+.+.+
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~~~~~~~~D~vi~~GDl~~~~~~~~-~~~~~~~~~~~---p~~~~~~~~~~~~~~~~~~ 80 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEK-EYERAHLARRE---PNRKVIHENEHYIIETLDK 80 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHHHH-HHHHHHHTTCC---CCTHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChHHHHHHHHHHHhcCCCEEEECCCCCCccCcch-hhhhhhhhhcc---cchhhhhHHHHHHHHHHHH
Confidence 5899999999987543 44556666679999999999985310000 00000000000 001111111 022334
Q ss_pred hhhhhhc-cCCcEEecCCccccccccchhhHHhhhccC-CCCCCCCCCCceeEEEEeCcEEEEEEeccccC-CCCHHHHH
Q 008343 283 YMQPVLS-KVPIMVVEGNHEYEEQAENRTFVAYTSRFA-FPSKESGSLSKFYYSFNAGGIHFLMLAAYVSF-DKSGDQYK 359 (569)
Q Consensus 283 ~l~~l~~-~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~-~P~~~~~~~~~~yYsf~~G~v~fI~LDt~~~~-~~~~~Q~~ 359 (569)
+++.+.. ..|+++++||||..... .+........ .|... ...+ ...+++++++|+.++..... ....+|+.
T Consensus 81 ~l~~l~~~~~pv~~v~GNHD~~~~~---~~~~~~~~~~~~~~~~--~l~~-~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 154 (260)
T 2yvt_A 81 FFREIGELGVKTFVVPGKNDAPLKI---FLRAAYEAETAYPNIR--VLHE-GFAGWRGEFEVIGFGGLLTEHEFEEDFVL 154 (260)
T ss_dssp HHHHHHTTCSEEEEECCTTSCCHHH---HHHHHHHTTTTCTTEE--ECSS-EEEEETTTEEEEEECSEEESSCCBSSSSC
T ss_pred HHHHHHhcCCcEEEEcCCCCchhhh---hHHHHhhhccCCcceE--EecC-cceEEECCEEEEecCCCcCCCCcCHHHHh
Confidence 4444432 68999999999985311 0111111110 01000 0001 12377889999999853211 11122221
Q ss_pred ----HHH----HHHhccccCCCCEEEEEeCCCccccCcccc--cchHHHHHHHHHHHHHcCCcEEEEcccc
Q 008343 360 ----WLE----EDLANVEREVTPWLVATWHAPWYSTYKAHY--REAECMRVAMEDLLYKYGVDVVFNGHVH 420 (569)
Q Consensus 360 ----WL~----~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~--~~~~~~r~~l~~ll~~~~VdlvlsGH~H 420 (569)
|+. +.|++.. . ...|++.|+|++....... .........+.+++.+++++++++||+|
T Consensus 155 ~~~~~~~~~~l~~l~~~~--~-~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~vl~GH~H 222 (260)
T 2yvt_A 155 KYPRWYVEYILKFVNELK--P-RRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG 222 (260)
T ss_dssp EEEHHHHHHHGGGGGGSC--C-CEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSC
T ss_pred hcchhhHHHHHHHHHhcC--C-CCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCEEEECCcc
Confidence 433 3333322 2 2468888999875311100 0000012456678888999999999999
No 11
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=99.47 E-value=1.9e-13 Score=132.37 Aligned_cols=173 Identities=10% Similarity=0.012 Sum_probs=97.7
Q ss_pred CeEEEEEcccCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHHhhhh
Q 008343 208 PSRIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQP 286 (569)
Q Consensus 208 ~~rfavigD~g~~~~~-~~~~~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~~l~~ 286 (569)
++||+++||+|..... ...++.+.+.++|+||++||+++. +.. ...+..+.+.++.
T Consensus 5 ~mri~~iSD~H~~~~~~~~~~~~~~~~~~D~vi~~GDl~~~------~~~-----------------~~~~~~~~~~l~~ 61 (228)
T 1uf3_A 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPK------AAK-----------------SRDYAAFFRILSE 61 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCT------TCC-----------------HHHHHHHHHHHGG
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHhhcCCCEEEECCCCCCC------CCC-----------------HHHHHHHHHHHHh
Confidence 5899999999986432 233444445589999999999852 210 1122233344443
Q ss_pred hhccCCcEEecCCccccccccchhhH-HhhhccCCCCCCCCCCCceeEEEEeC-cEEEEEEeccc--cCCCCHH------
Q 008343 287 VLSKVPIMVVEGNHEYEEQAENRTFV-AYTSRFAFPSKESGSLSKFYYSFNAG-GIHFLMLAAYV--SFDKSGD------ 356 (569)
Q Consensus 287 l~~~~P~~~v~GNHD~~~~~~~~~~~-~y~~~f~~P~~~~~~~~~~yYsf~~G-~v~fI~LDt~~--~~~~~~~------ 356 (569)
+ ..|+++++||||.... +.+. .+......|... ..... .+.++ +++|+.++... .+....+
T Consensus 62 ~--~~pv~~v~GNHD~~~~---~~~~~~~~~~~~~~~~~--~l~~~--~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~ 132 (228)
T 1uf3_A 62 A--HLPTAYVPGPQDAPIW---EYLREAANVELVHPEMR--NVHET--FTFWRGPYLVAGVGGEIADEGEPEEHEALRYP 132 (228)
T ss_dssp G--CSCEEEECCTTSCSHH---HHHHHHHHHHHHCTTEE--ECBTS--EEEETTTEEEEEECSEEESSSCCBSSSSCEEE
T ss_pred c--CCcEEEECCCCCchhH---HHHHhhhhhhccCcceE--Ecccc--eEeeCCCcEEecCCCCcCCCCccChhhcccch
Confidence 3 6799999999998532 1111 110000011100 00111 24456 89999987532 1111222
Q ss_pred --HHHHHHHHHhccccCCCCEEEEEeCCCccccCcccccchHHHHHHHHHHHHHcCCcEEEEcccc
Q 008343 357 --QYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVH 420 (569)
Q Consensus 357 --Q~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H 420 (569)
+.+|+++.|++.. ..+.|++.|+|++....... . .+.+.+++.+++++++++||+|
T Consensus 133 ~~~~~~~~~~l~~~~---~~~~il~~H~p~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~GH~H 190 (228)
T 1uf3_A 133 AWVAEYRLKALWELK---DYPKIFLFHTMPYHKGLNEQ-G----SHEVAHLIKTHNPLLVLVAGKG 190 (228)
T ss_dssp HHHHHHHHGGGGGSC---SCCEEEEESSCBCBTTTBTT-S----BHHHHHHHHHHCCSEEEECCSS
T ss_pred hhhHHHHHHHHHhCC---CCCeEEEEccCcccCCcccc-C----HHHHHHHHHHhCCCEEEEcccc
Confidence 2344455555543 12588999999876411111 1 1356677888999999999999
No 12
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=99.44 E-value=2.8e-13 Score=140.42 Aligned_cols=188 Identities=15% Similarity=0.123 Sum_probs=98.7
Q ss_pred CeEEEEEcccCCC----CC---------hHH----HHHHHHhCCCCEEEEcCC-cccccccccCCCCCccccccCCCCCC
Q 008343 208 PSRIAIVGDVGLT----YN---------TTS----TVSHMISNRPDLILLVGD-VTYANLYLTNGTGSDCYACSFANSPI 269 (569)
Q Consensus 208 ~~rfavigD~g~~----~~---------~~~----~~~~l~~~~pDfvl~~GD-l~Y~d~~~~~G~~~~~~~~~~~~~~~ 269 (569)
.+||++++|+|.+ .. ... +++.+.+.++|+||++|| ++.. +. +.
T Consensus 18 ~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~------~~------------~~ 79 (336)
T 2q8u_A 18 ELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSR------NN------------PS 79 (336)
T ss_dssp EEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCS------SC------------CC
T ss_pred ceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCC------CC------------CC
Confidence 7999999999976 21 122 334445579999999999 6531 11 11
Q ss_pred ccchhHHHHHHHHhhhhhhccCCcEEecCCccccccccchhhHHhhhccC----CCCCCCCCCCceeEEEEeCcEEEEEE
Q 008343 270 HETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFA----FPSKESGSLSKFYYSFNAGGIHFLML 345 (569)
Q Consensus 270 ~e~Y~~~wd~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~----~P~~~~~~~~~~yYsf~~G~v~fI~L 345 (569)
......+.++++.+...+|+++++||||... ...+..+..... +-.+. .....+.++.+++.|+.+
T Consensus 80 ----~~~~~~~~~~l~~L~~~~pv~~i~GNHD~~~---~~~~~~~l~~~g~nv~v~~~~---~~~~~~~~~~~~v~i~gl 149 (336)
T 2q8u_A 80 ----VVALHDLLDYLKRMMRTAPVVVLPGNHDWKG---LKLFGNFVTSISSDITFVMSF---EPVDVEAKRGQKVRILPF 149 (336)
T ss_dssp ----HHHHHHHHHHHHHHHHHSCEEECCC---------CHHHHHHHHHHCSSEEECCSS---SCEEEECTTSCEEEEEEE
T ss_pred ----HHHHHHHHHHHHHHHhcCCEEEECCCCCccc---cccHHHHHHhcCCEEEEEecc---cccCceEEeCCCEEEEEC
Confidence 1122344556666643389999999999864 122222322111 11110 000011222367888888
Q ss_pred eccccC-------CCCHHHHHHHHHHHhccccCCCCEEEEEeCCCccccCcccccchHHH-HHHHHHHHHHcCCcEEEEc
Q 008343 346 AAYVSF-------DKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECM-RVAMEDLLYKYGVDVVFNG 417 (569)
Q Consensus 346 Dt~~~~-------~~~~~Q~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~-r~~l~~ll~~~~VdlvlsG 417 (569)
+..... ....+|++|+.+.|...-.....+.|++.|.|.+...... .+. .. ...+...+.+.++|++++|
T Consensus 150 p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~~-~~~-~~~~~~v~~~l~~~~~d~v~~G 227 (336)
T 2q8u_A 150 PYPDESEALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYA-GIE-QGREIIINRALIPSVVDYAALG 227 (336)
T ss_dssp CCC-------CCSSHHHHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC----------CCCEECGGGSCTTSSEEEEE
T ss_pred CCCCHHHHHHHhhHHHHHHHHHHHHHHHHhccCCCCCEEEEECccccCCCCCC-Ccc-chhhcccCHHHccccCCEEEEc
Confidence 643211 1134678999888865310123579999999987532110 000 00 0001112334689999999
Q ss_pred cccCccee
Q 008343 418 HVHAYERS 425 (569)
Q Consensus 418 H~H~yeR~ 425 (569)
|+|..+..
T Consensus 228 H~H~~~~~ 235 (336)
T 2q8u_A 228 HIHSFREI 235 (336)
T ss_dssp SCSSCEEE
T ss_pred cccCceEe
Confidence 99998775
No 13
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=99.21 E-value=2.5e-10 Score=110.75 Aligned_cols=143 Identities=14% Similarity=0.317 Sum_probs=84.2
Q ss_pred CeEEEEEcccCCCCC---hHHHHHHH-HhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHHh
Q 008343 208 PSRIAIVGDVGLTYN---TTSTVSHM-ISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRY 283 (569)
Q Consensus 208 ~~rfavigD~g~~~~---~~~~~~~l-~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~~ 283 (569)
.+||+++||+|.... ..+.+.++ .+.++|+|+++||++.. ...+.
T Consensus 25 ~m~i~~iSD~H~~~~~~~l~~~l~~~~~~~~~D~vi~~GDl~~~-------------------------------~~l~~ 73 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCSQ-------------------------------EYVEM 73 (215)
T ss_dssp CEEEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCCH-------------------------------HHHHH
T ss_pred CcEEEEEecCCCCCChHHHHHHHHHHHhcCCCCEEEECCCCCCH-------------------------------HHHHH
Confidence 489999999997642 22344444 34689999999999831 11233
Q ss_pred hhhhhccCCcEEecCCccccccccchhhHHhhhccCCCCCCCCCCCceeEEEEeCcEEEEEEeccccCCCCHHHHHHHHH
Q 008343 284 MQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFDKSGDQYKWLEE 363 (569)
Q Consensus 284 l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~LDt~~~~~~~~~Q~~WL~~ 363 (569)
++.+ ..|+++++||||....... ..|.. .+| ....+
T Consensus 74 l~~~--~~~v~~V~GNHD~~~~~~~---~~~~~--~lp---------~~~~~---------------------------- 109 (215)
T 2a22_A 74 LKNI--TKNVYIVSGDLDSAIFNPD---PESNG--VFP---------EYVVV---------------------------- 109 (215)
T ss_dssp HHHH--CSCEEECCCTTCCSCCBCC---GGGTB--CCC---------SEEEE----------------------------
T ss_pred HHHc--CCCEEEecCCCcCcccccC---hhhHh--hCC---------ceEEE----------------------------
Confidence 4433 4689999999998532100 00000 000 00000
Q ss_pred HHhccccCCCCEEEEEeCCCccccCcccccchHHHHHHHHHHHHHcCCcEEEEccccCcceeeccccCccCCCCCeEEEE
Q 008343 364 DLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCGPVHITV 443 (569)
Q Consensus 364 ~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~v~n~~~~~~g~vyIv~ 443 (569)
+ ...+.|++.|.+.+.... . .+.+..++.+.+++++++||+|...... .+++.+|..
T Consensus 110 ---~----~~~~~i~l~Hg~~~~~~~----~----~~~l~~~~~~~~~d~vl~GHtH~~~~~~--------~~~~~~inp 166 (215)
T 2a22_A 110 ---Q----IGEFKIGLMHGNQVLPWD----D----PGSLEQWQRRLDCDILVTGHTHKLRVFE--------KNGKLFLNP 166 (215)
T ss_dssp ---E----ETTEEEEEECSTTSSSTT----C----HHHHHHHHHHHTCSEEEECSSCCCEEEE--------ETTEEEEEC
T ss_pred ---e----cCCeEEEEEcCCccCCCC----C----HHHHHHHHhhcCCCEEEECCcCCCccEe--------eCCEEEEEC
Confidence 0 012468888855443211 1 2345667777899999999999865431 246777777
Q ss_pred CCCCc
Q 008343 444 GDGGN 448 (569)
Q Consensus 444 G~gG~ 448 (569)
|+.+.
T Consensus 167 GS~~~ 171 (215)
T 2a22_A 167 GTATG 171 (215)
T ss_dssp CCSSC
T ss_pred Ccccc
Confidence 77654
No 14
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=99.19 E-value=1.1e-09 Score=104.06 Aligned_cols=134 Identities=14% Similarity=0.289 Sum_probs=82.5
Q ss_pred CeEEEEEcccCCCCC---hHHHHHHHH-hCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHHh
Q 008343 208 PSRIAIVGDVGLTYN---TTSTVSHMI-SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRY 283 (569)
Q Consensus 208 ~~rfavigD~g~~~~---~~~~~~~l~-~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~~ 283 (569)
.+||+++||+|.... ....+..+. +.++|+|+++||++.. . ..+.
T Consensus 10 mm~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d~ii~~GDl~~~---------------------------~----~~~~ 58 (192)
T 1z2w_A 10 RMLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTK---------------------------E----SYDY 58 (192)
T ss_dssp -CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBSH---------------------------H----HHHH
T ss_pred ceEEEEEecCCCCccchhHHHHHHHHhccCCCCEEEEcCCCCCH---------------------------H----HHHH
Confidence 479999999997532 223333333 4579999999999831 1 1223
Q ss_pred hhhhhccCCcEEecCCccccccccchhhHHhhhccCCCCCCCCCCCceeEEEEeCcEEEEEEeccccCCCCHHHHHHHHH
Q 008343 284 MQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFDKSGDQYKWLEE 363 (569)
Q Consensus 284 l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~LDt~~~~~~~~~Q~~WL~~ 363 (569)
++.+ ..|+++++||||... .+|. ...++.
T Consensus 59 l~~~--~~~~~~v~GNhD~~~--------------~lp~---------~~~~~~-------------------------- 87 (192)
T 1z2w_A 59 LKTL--AGDVHIVRGDFDENL--------------NYPE---------QKVVTV-------------------------- 87 (192)
T ss_dssp HHHH--CSEEEECCCTTCCCT--------------TSCS---------EEEEEE--------------------------
T ss_pred HHhc--CCCEEEEcCCcCccc--------------cCCc---------ceEEEE--------------------------
Confidence 3333 358999999999752 1221 111111
Q ss_pred HHhccccCCCCEEEEEeCCCccccCcccccchHHHHHHHHHHHHHcCCcEEEEccccCcceeeccccCccCCCCCeEEEE
Q 008343 364 DLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCGPVHITV 443 (569)
Q Consensus 364 ~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~v~n~~~~~~g~vyIv~ 443 (569)
..+.|++.|.+.+.... . .+.+..++.+.+++++++||+|...... .+|+.+|..
T Consensus 88 ---------~~~~i~l~Hg~~~~~~~----~----~~~l~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inp 142 (192)
T 1z2w_A 88 ---------GQFKIGLIHGHQVIPWG----D----MASLALLQRQFDVDILISGHTHKFEAFE--------HENKFYINP 142 (192)
T ss_dssp ---------TTEEEEEECSCCCCBTT----C----HHHHHHHHHHHSSSEEECCSSCCCEEEE--------ETTEEEEEC
T ss_pred ---------CCEEEEEECCCcCCCCC----C----HHHHHHHHHhcCCCEEEECCcCcCccEe--------ECCEEEEEC
Confidence 12578888855443211 1 2345567777899999999999865431 247777777
Q ss_pred CCCCc
Q 008343 444 GDGGN 448 (569)
Q Consensus 444 G~gG~ 448 (569)
|+.+.
T Consensus 143 GS~~~ 147 (192)
T 1z2w_A 143 GSATG 147 (192)
T ss_dssp CCTTC
T ss_pred Ccccc
Confidence 77654
No 15
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.18 E-value=4.5e-11 Score=118.24 Aligned_cols=186 Identities=8% Similarity=0.005 Sum_probs=99.6
Q ss_pred eEEEEEcccCCCCCh-HHHHHHHH---hC--CCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHH
Q 008343 209 SRIAIVGDVGLTYNT-TSTVSHMI---SN--RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGR 282 (569)
Q Consensus 209 ~rfavigD~g~~~~~-~~~~~~l~---~~--~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~ 282 (569)
+||+++||+|..... ...++.+. +. ++|+|+++||++.. |.. . ....+
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~------g~~------------------~--~~~~~ 55 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGL------FPY------------------P--KEVIE 55 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSS------SSC------------------H--HHHHH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCC------CCC------------------H--HHHHH
Confidence 689999999975322 34455555 55 78999999999942 210 0 11223
Q ss_pred hhhhhhccCCcEEecCCccccccccchhhHHhhhccCCCCCCCCCCCceeEEEEeCcEEEEEEec--cccCCCCHHHHHH
Q 008343 283 YMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAA--YVSFDKSGDQYKW 360 (569)
Q Consensus 283 ~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~LDt--~~~~~~~~~Q~~W 360 (569)
.+..+....|+++++||||..... +...+. .. .. ...++..... ... +.......+|++|
T Consensus 56 ~l~~l~~~~~~~~v~GNhD~~~~~-------~~~~~~-~~------~~-~~~~~~~~~~---~~~~~~~~~~l~~~~~~~ 117 (252)
T 1nnw_A 56 VIKDLTKKENVKIIRGKYDQIIAM-------SDPHAT-DP------GY-IDKLELPGHV---KKALKFTWEKLGHEGREY 117 (252)
T ss_dssp HHHHHHHHSCEEEECCHHHHHHHH-------SCTTCS-SS------GG-GGGSSCCHHH---HHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHhhcCeeEEecchHHHhhc-------cccccC-Cc------cc-ccchhhhHHH---HHHHHHHHHHCCHHHHHH
Confidence 344443336899999999974210 001110 00 00 0000000000 000 0001124678899
Q ss_pred HHHHHhccccCCCCEEEEEeCCCccccCc-ccccchHHHHHHHHHHHHHc-CCcEEEEccccCcceeeccccCccCCCCC
Q 008343 361 LEEDLANVEREVTPWLVATWHAPWYSTYK-AHYREAECMRVAMEDLLYKY-GVDVVFNGHVHAYERSNRVYNYTLDPCGP 438 (569)
Q Consensus 361 L~~~L~~~~~~~~~wvIv~~H~P~y~s~~-~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~yeR~~~v~n~~~~~~g~ 438 (569)
|++.............|++.|++++.... ..... ...+.+..++.++ +++++++||+|...... .+|+
T Consensus 118 L~~lp~~~~~~~~~~~i~~~H~~p~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~--------~~~~ 187 (252)
T 1nnw_A 118 LRDLPIYLVDKIGGNEVFGVYGSPINPFDGEVLAE--QPTSYYEAIMRPVKDYEMLIVASPMYPVDAM--------TRYG 187 (252)
T ss_dssp HHTSCSCEEEEETTEEEEEESSCSSCTTTCCCCSS--CCHHHHHHHHGGGTTSSEEEESTTCSEEEEE--------ETTE
T ss_pred HHhCCceEEEeeCCcEEEEEcCCCCCCcccccCCC--CCHHHHHHHHhcCCCCCEEEECCccccceEe--------cCCe
Confidence 87643332211112367778877643211 11111 1124567788888 99999999999865442 2477
Q ss_pred eEEEECCCCc
Q 008343 439 VHITVGDGGN 448 (569)
Q Consensus 439 vyIv~G~gG~ 448 (569)
.+|..|+.|.
T Consensus 188 ~~in~Gs~~~ 197 (252)
T 1nnw_A 188 RVVCPGSVGF 197 (252)
T ss_dssp EEEEECCSSS
T ss_pred EEEECCCccC
Confidence 8888888765
No 16
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=99.17 E-value=1.3e-10 Score=117.75 Aligned_cols=199 Identities=15% Similarity=0.082 Sum_probs=106.6
Q ss_pred CeEEEEEcccCCCCChHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHHhhhhh
Q 008343 208 PSRIAIVGDVGLTYNTTSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPV 287 (569)
Q Consensus 208 ~~rfavigD~g~~~~~~~~~~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~~l~~l 287 (569)
.+||+++||+|...... .-.++|+||++||++.. |. ......+.++++.+
T Consensus 59 ~mri~~iSD~H~~~~~l------~i~~~D~vi~aGDl~~~------g~------------------~~e~~~~~~~L~~l 108 (296)
T 3rl5_A 59 HTRFVCISDTRSRTDGI------QMPYGDILLHTGDFTEL------GL------------------PSEVKKFNDWLGNL 108 (296)
T ss_dssp EEEEEEEBCCTTCCTTC------CCCSCSEEEECSCCSSS------CC------------------HHHHHHHHHHHHTS
T ss_pred CeEEEEEeeCCCCcchh------ccCCCCEEEECCcccCC------CC------------------HHHHHHHHHHHHhC
Confidence 58999999999874321 12478999999999952 22 12233444555554
Q ss_pred hccCCcEEecCCccccccccchhhHHhhh----cc----CCCCC---CCCC-CCceeE----EEEeCcEEEEEEeccccC
Q 008343 288 LSKVPIMVVEGNHEYEEQAENRTFVAYTS----RF----AFPSK---ESGS-LSKFYY----SFNAGGIHFLMLAAYVSF 351 (569)
Q Consensus 288 ~~~~P~~~v~GNHD~~~~~~~~~~~~y~~----~f----~~P~~---~~~~-~~~~yY----sf~~G~v~fI~LDt~~~~ 351 (569)
. ..++++++||||...+.. .+..... ++ ..+.. .-.. ..+..| +..+++++|+...-...+
T Consensus 109 ~-~~~v~~V~GNHD~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~i~Gl~i~Gsp~tP~~ 185 (296)
T 3rl5_A 109 P-YEYKIVIAGNHELTFDKE--FMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWF 185 (296)
T ss_dssp C-CSEEEECCCTTCGGGCHH--HHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSEEEEETTEEEEEECCBCC-
T ss_pred C-CCeEEEEcCCcccccchh--hhhhhhcccccccccccccccchhhhHhhhcCCeEEecCCcEEECCEEEEEecCCCCC
Confidence 2 245899999999964321 1111000 00 00000 0000 011111 456788998885432211
Q ss_pred ---CCCHHHHHHHHHHHhccccCCCCEEEEEeCCCccccCcccc-cchHHHHHHHHHHH-HHcCCcEEEEccccCcceee
Q 008343 352 ---DKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHY-REAECMRVAMEDLL-YKYGVDVVFNGHVHAYERSN 426 (569)
Q Consensus 352 ---~~~~~Q~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~-~~~~~~r~~l~~ll-~~~~VdlvlsGH~H~yeR~~ 426 (569)
....++.+++.+.+.+.. .+ ..|++.|.|++....... .....-.+.|.+++ .+++.+++++||+|......
T Consensus 186 ~~~~f~~~~~~~~~~~~~~ip-~~--~dILvTH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~ 262 (296)
T 3rl5_A 186 NGWGFNLPRGQSLLDKWNLIP-EG--TDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTM 262 (296)
T ss_dssp -CCTTBCCTTHHHHHHHTTSC-TT--CSEEEESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEE
T ss_pred CCcCCCcchHHHHHHHHhhCC-CC--CeEEEECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCCCceE
Confidence 111222234444444432 22 358899999987632110 00000013344555 58899999999999753321
Q ss_pred ccccCccCCCCCeEEEECCCCcc
Q 008343 427 RVYNYTLDPCGPVHITVGDGGNR 449 (569)
Q Consensus 427 ~v~n~~~~~~g~vyIv~G~gG~~ 449 (569)
..+++++|..|+-|..
T Consensus 263 -------~~g~t~vvNpGs~~~~ 278 (296)
T 3rl5_A 263 -------TDGYTTYINASTCTVS 278 (296)
T ss_dssp -------ECSSCEEEECBCSCTT
T ss_pred -------EECCEEEEECCcCCcC
Confidence 1357888887877664
No 17
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=99.16 E-value=9.3e-10 Score=103.12 Aligned_cols=58 Identities=9% Similarity=0.035 Sum_probs=40.4
Q ss_pred EEEEEeCCCccccCcccccchHHHHHHHHHHHHHcCCcEEEEccccCcceeeccccCccCCCCCeEEEECCCCc
Q 008343 375 WLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCGPVHITVGDGGN 448 (569)
Q Consensus 375 wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~v~n~~~~~~g~vyIv~G~gG~ 448 (569)
+.|++.|.|++.... . .+.+.+++.+++++++++||+|...... .+|+.+|..|+.|.
T Consensus 78 ~~i~~~Hg~~~~~~~----~----~~~l~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inpGs~~~ 135 (176)
T 3ck2_A 78 TKIIQTHGHLFDINF----N----FQKLDYWAQEEEAAICLYGHLHVPSAWL--------EGKILFLNPGSISQ 135 (176)
T ss_dssp EEEEEECSGGGTTTT----C----SHHHHHHHHHTTCSEEECCSSCCEEEEE--------ETTEEEEEECCSSS
T ss_pred eEEEEECCCccCCCC----C----HHHHHHHHHhcCCCEEEECCcCCCCcEE--------ECCEEEEECCCCCc
Confidence 468888988765321 1 1345677788999999999999865432 24677787777654
No 18
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=99.12 E-value=3.4e-10 Score=119.31 Aligned_cols=189 Identities=19% Similarity=0.240 Sum_probs=101.8
Q ss_pred eEEEEEcccCCCCC----h---------HHHHH----HHHhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCcc
Q 008343 209 SRIAIVGDVGLTYN----T---------TSTVS----HMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHE 271 (569)
Q Consensus 209 ~rfavigD~g~~~~----~---------~~~~~----~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e 271 (569)
+||++++|+|.+.. . ...++ .+.+.+||+||++||+++.. +. +.
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~-----~~------------~~-- 61 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSR-----NN------------PS-- 61 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCS-----SS------------CC--
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccC-----CC------------CC--
Confidence 58999999998754 1 12333 33456999999999998321 11 11
Q ss_pred chhHHHHHHHHhhhhhhccCCcEEecCCccccccccchhhHHhhhccCCCCCCCCCCCceeEEEE--eC-cEEEEEEecc
Q 008343 272 TYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFN--AG-GIHFLMLAAY 348 (569)
Q Consensus 272 ~Y~~~wd~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~--~G-~v~fI~LDt~ 348 (569)
...+..+.+.++.+...+|+++++||||.... ..+..+... ++.+........-+.+. .| .+.|+.+.-.
T Consensus 62 --~~~~~~~~~~l~~l~~~~~v~~i~GNHD~~~~---~~~~~~~~~--~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~ 134 (379)
T 3tho_B 62 --VVALHDLLDYLKRMMRTAPVVVLPGNQDWKGL---KLFGNFVTS--ISSDITFVMSFEPVDVEAKRGQKVRILPFPYP 134 (379)
T ss_dssp --HHHHHHHHHHHHHHHHHSCEEECCCTTSCTTH---HHHHHHHHT--TCSSEEECCSSCCEEEECTTCCEEEEEEECCC
T ss_pred --HHHHHHHHHHHHHHHhCCCEEEEcCCCccccC---ccccccccc--cCCcceeecccceEEEEcCCCCEEEEEECCCC
Confidence 12334455666666534999999999996421 112222221 11110000001112232 23 4777776532
Q ss_pred ccC----CCCHHHHHHHHHHHhcc---ccCCCCEEEEEeCCCccccCcccccchHH-HHHHHHHHHHHcCCcEEEEcccc
Q 008343 349 VSF----DKSGDQYKWLEEDLANV---EREVTPWLVATWHAPWYSTYKAHYREAEC-MRVAMEDLLYKYGVDVVFNGHVH 420 (569)
Q Consensus 349 ~~~----~~~~~Q~~WL~~~L~~~---~~~~~~wvIv~~H~P~y~s~~~~~~~~~~-~r~~l~~ll~~~~VdlvlsGH~H 420 (569)
... ....++.+|+.+.|++. ......+.|++.|.++..... +.+.+. +...+...+...++|+++.||.|
T Consensus 135 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~I~l~H~~v~g~~~--~~~se~~~~~~v~~~~~~~~~dyvalGH~H 212 (379)
T 3tho_B 135 DESEALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAG--YAGIEQGREIIINRALIPSVVDYAALGHIH 212 (379)
T ss_dssp CCC----CHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEEESCBSCCCC---------CSCCBCGGGSCTTSSEEEEESCS
T ss_pred CHHHHhhhhccchHHHHHHHHHHHHHHhcCCCCCeEEEEeccccCCcc--CCCCccccccccCHHHcCcCCCEEEccccc
Confidence 211 12356789999998731 111345689999998764321 000000 00112122234689999999999
Q ss_pred Cccee
Q 008343 421 AYERS 425 (569)
Q Consensus 421 ~yeR~ 425 (569)
..+..
T Consensus 213 ~~q~~ 217 (379)
T 3tho_B 213 SFREI 217 (379)
T ss_dssp SCEEE
T ss_pred CCeEe
Confidence 98654
No 19
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=99.12 E-value=2.2e-10 Score=115.08 Aligned_cols=186 Identities=17% Similarity=0.150 Sum_probs=101.9
Q ss_pred CCeEEEEEcccCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHHhhh
Q 008343 207 YPSRIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQ 285 (569)
Q Consensus 207 ~~~rfavigD~g~~~~~-~~~~~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~~l~ 285 (569)
.+.||+++||+|..... .++++.+.+.++|.|+++||++.. |.. .....+.++
T Consensus 10 ~~~~i~~iSDiHg~~~~l~~vl~~~~~~~~D~ii~~GDlv~~------g~~--------------------~~~~~~~l~ 63 (270)
T 3qfm_A 10 DMTKIALLSDIHGNTTALEAVLADARQLGVDEYWLLGDILMP------GTG--------------------RRRILDLLD 63 (270)
T ss_dssp -CEEEEEECCCTTCHHHHHHHHHHHHHTTCCEEEECSCCSSS------SSC--------------------SHHHHHHHH
T ss_pred cccEEEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCC------CCC--------------------HHHHHHHHH
Confidence 37899999999965322 345566666789999999999942 210 012233333
Q ss_pred hhhccCCcEEecCCccccccccchhhHHhhhccCCCCCCCCCCCceeEEEEeCcEEEEEEeccccCCCCHHHHHHHHHHH
Q 008343 286 PVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFDKSGDQYKWLEEDL 365 (569)
Q Consensus 286 ~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~LDt~~~~~~~~~Q~~WL~~~L 365 (569)
.+ .|++++.||||..... .....+.+... ...+.+ . ...+.......+|++||++.-
T Consensus 64 ~~---~~~~~v~GNhD~~~~~------~~~~~~~~~~~-----~~~~~~----~-----~~~~~~~~L~~~~~~~L~~LP 120 (270)
T 3qfm_A 64 QL---PITARVLGNWEDSLWH------GVRKELDSTRP-----SQRYLL----R-----QCQYVLEEISLEEIEVLHNQP 120 (270)
T ss_dssp TS---CEEEECCCHHHHHHHH------HHTTCSCTTSH-----HHHHHH----H-----HHHHHHTTSCHHHHHHHHSCC
T ss_pred cc---CCEEEEcCChHHHHHH------hhccccCCCcH-----HHHHHH----H-----HHHHHHHHcCHHHHHHHHhCC
Confidence 33 3789999999975210 00011111000 000000 0 000111234678999998654
Q ss_pred hccccCCCCEEEEEeCCCccccCcccccchHHHHHHHHHHHHHcCCcEEEEccccCcceeeccccCccCCCCCeEEEECC
Q 008343 366 ANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCGPVHITVGD 445 (569)
Q Consensus 366 ~~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~v~n~~~~~~g~vyIv~G~ 445 (569)
...........|++.|..+......... ...-.+.+..++.+.++|++|+||+|.-.... ..+|..+|..|+
T Consensus 121 ~~~~~~~~g~~i~lvHg~p~~~~~~~~~-~~~~~~~l~~~~~~~~~d~~i~GHtH~~~~~~-------~~~~~~~iNpGS 192 (270)
T 3qfm_A 121 LQIHRQFGDLTVGISHHLPDKNWGRELI-HTGKQEEFDRLVTHPPCDIAVYGHIHQQLLRY-------GTGGQLIVNPGS 192 (270)
T ss_dssp SEEEEEETTEEEEEESSBTTBSSSSTTS-TTCCHHHHHHTTTTTTCSEEECCSSCSEEEEE-------CTTSCEEEEECC
T ss_pred CceEEEECCcEEEEEECCCCCCCCceec-CCCcHHHHHHHhcccCCCEEEECCcCchHhee-------ccCCEEEEECCC
Confidence 4321111224677778654432111000 01113456677777899999999999643321 135788899999
Q ss_pred CCcc
Q 008343 446 GGNR 449 (569)
Q Consensus 446 gG~~ 449 (569)
.|..
T Consensus 193 vg~p 196 (270)
T 3qfm_A 193 IGQP 196 (270)
T ss_dssp SSSC
T ss_pred ccCC
Confidence 8874
No 20
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=99.12 E-value=6.2e-10 Score=117.56 Aligned_cols=174 Identities=16% Similarity=0.135 Sum_probs=93.3
Q ss_pred CeEEEEEcccCCCCC--------------hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccch
Q 008343 208 PSRIAIVGDVGLTYN--------------TTSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETY 273 (569)
Q Consensus 208 ~~rfavigD~g~~~~--------------~~~~~~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y 273 (569)
++||++++|+|.+.. ...+++.+.+.++|+||++||++.. +. +.
T Consensus 20 ~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~------~~------------p~---- 77 (386)
T 3av0_A 20 HMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFND------LR------------PP---- 77 (386)
T ss_dssp CCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSS------SS------------CC----
T ss_pred CeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCC------CC------------CC----
Confidence 699999999998742 1233444556799999999999842 11 11
Q ss_pred hHHHHHHHHhhhhhhc-cCCcEEecCCccccccccch-hhHHhhhccCCCCCCCCCCCceeEEEEeCcEEEEEEeccccC
Q 008343 274 QPRWDYWGRYMQPVLS-KVPIMVVEGNHEYEEQAENR-TFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSF 351 (569)
Q Consensus 274 ~~~wd~~~~~l~~l~~-~~P~~~v~GNHD~~~~~~~~-~~~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~LDt~~~~ 351 (569)
...+..+.+.++.+.. ++|+++++||||........ ....+.....+-. ...++..+.+++.|+.++.....
T Consensus 78 ~~~~~~~~~~l~~L~~~~~pv~~v~GNHD~~~~~~~~~~~~~l~~~v~~l~------~~~v~~~~~~~v~i~gl~~~~~~ 151 (386)
T 3av0_A 78 VKALRIAMQAFKKLHENNIKVYIVAGNHEMPRRLGEESPLALLKDYVKILD------GKDVINVNGEEIFICGTYYHKKS 151 (386)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEECCCGGGSCSSTTSCCGGGGGTTTCEECS------EEEEEEETTEEEEEEEECCCCST
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEcCCCCCCccccccCHHHHHHHHeEEcC------CCcEEEeCCCCEEEEeCCCCCHH
Confidence 1123345556666643 58999999999986422110 0011111010000 11122122246888888864322
Q ss_pred CCCHHHHHHH---HHHHhccccCCCCEEEEEeCCCccccCcccccchHHHHHHHHHHHHHcCCcEEEEccccCcce
Q 008343 352 DKSGDQYKWL---EEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYER 424 (569)
Q Consensus 352 ~~~~~Q~~WL---~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR 424 (569)
......+|| ...+.. ..+.|++.|.|........+.. .+.. +. ++|++++||+|..+.
T Consensus 152 -~~~~~~~~l~~l~~~~~~-----~~~~Ill~H~~~~~~~~~~~~~------~~~~-l~--~~d~v~~GH~H~~~~ 212 (386)
T 3av0_A 152 -KREEMLDKLKNFESEAKN-----YKKKILMLHQGINPYIPLDYEL------EHFD-LP--KFSYYALGHIHKRIL 212 (386)
T ss_dssp -THHHHHHHHHHHHHHHHT-----CSSEEEEECCCCTTTSSSSCSS------CGGG-SC--CCSEEEECSCCSCEE
T ss_pred -HHHHHHHHHHHhhhhccc-----CCCEEEEECcCccccCCCCccc------CHHH-hh--hCCeEEccCCCCCcc
Confidence 112233343 322221 2348999999875421111110 0111 11 399999999998754
No 21
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=98.98 E-value=1.7e-09 Score=102.95 Aligned_cols=48 Identities=19% Similarity=0.286 Sum_probs=36.0
Q ss_pred EEEEEeCCCccccCcccccchHHHHHHHHHHHHHcCCcEEEEccccCccee
Q 008343 375 WLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERS 425 (569)
Q Consensus 375 wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~ 425 (569)
+.|++.|+|++......+. ...+.+.+++.+++++++|+||+|.....
T Consensus 107 ~~i~~~H~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~vi~GHtH~~~~~ 154 (195)
T 1xm7_A 107 KRILLSHYPAKDPITERYP---DRQEMVREIYFKENCDLLIHGHVHWNREG 154 (195)
T ss_dssp EEEEEESSCSSCSSCCSCH---HHHHHHHHHHHHTTCSEEEECCCCCCSCC
T ss_pred cEEEEEccCCcCCCccccc---chHHHHHHHHHHcCCcEEEECCcCCCCcc
Confidence 4788999998765432221 23577888999999999999999986543
No 22
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=98.92 E-value=2e-08 Score=94.42 Aligned_cols=62 Identities=15% Similarity=0.182 Sum_probs=42.7
Q ss_pred CeEEEEEcccCCCCC---hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHHhh
Q 008343 208 PSRIAIVGDVGLTYN---TTSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYM 284 (569)
Q Consensus 208 ~~rfavigD~g~~~~---~~~~~~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~~l 284 (569)
.+||+++||+|...+ ..+.++.+. .++|+|+++||++.. ...+.+
T Consensus 22 mmri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D~ii~~GD~~~~-------------------------------~~~~~l 69 (178)
T 2kkn_A 22 VKRFLLISDSHVPVRMASLPDEILNSL-KEYDGVIGLGDYVDL-------------------------------DTVILL 69 (178)
T ss_dssp CEEEEEECCCCBTTTTCCCCHHHHHGG-GGCSEEEESSCBSCH-------------------------------HHHHHH
T ss_pred ceEEEEEecccCCCCHHHHHHHHHHHh-cCCCEEEECCCCCCH-------------------------------HHHHHH
Confidence 479999999995222 234455444 689999999999841 112233
Q ss_pred hhhhccCCcEEecCCcccc
Q 008343 285 QPVLSKVPIMVVEGNHEYE 303 (569)
Q Consensus 285 ~~l~~~~P~~~v~GNHD~~ 303 (569)
+.+ ..|+++++||||..
T Consensus 70 ~~~--~~~v~~V~GNhD~~ 86 (178)
T 2kkn_A 70 EKF--SKEFYGVHGNMDYP 86 (178)
T ss_dssp HHH--TSSEEECCCSSSCG
T ss_pred Hhc--CCCEEEEECCCCcH
Confidence 333 36899999999974
No 23
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=98.91 E-value=6.6e-09 Score=98.79 Aligned_cols=140 Identities=16% Similarity=0.172 Sum_probs=83.9
Q ss_pred eEEEEEcccCCCCC-hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHHhhhhh
Q 008343 209 SRIAIVGDVGLTYN-TTSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPV 287 (569)
Q Consensus 209 ~rfavigD~g~~~~-~~~~~~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~~l~~l 287 (569)
+||+++||+|.... ..++++.+.+.++|+|+++||++.. ...+.++.+
T Consensus 26 m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D~ii~~GDl~~~-------------------------------~~~~~l~~l 74 (190)
T 1s3l_A 26 MKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL-------------------------------FVIKEFENL 74 (190)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST-------------------------------HHHHHGGGC
T ss_pred eEEEEEeeCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCH-------------------------------HHHHHHHhc
Confidence 89999999995422 1234555556789999999999731 122334433
Q ss_pred hccCCcEEecCCccccccccchhhHHhhhccCCCCCCCCCCCceeEEEEeCcEEEEEEeccccCCCCHHHHHHHHHHHhc
Q 008343 288 LSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFDKSGDQYKWLEEDLAN 367 (569)
Q Consensus 288 ~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~LDt~~~~~~~~~Q~~WL~~~L~~ 367 (569)
+.|+++|+||||.... .+..+..... .. .+. ... ..
T Consensus 75 --~~~~~~V~GNhD~~~~----~~~~~~~~~~--------~~-~l~------------~~~-----------------~~ 110 (190)
T 1s3l_A 75 --NANIIATYGNNDGERC----KLKEWLKDIN--------EE-NII------------DDF-----------------IS 110 (190)
T ss_dssp --SSEEEEECCTTCCCHH----HHHHHHHHHC--------TT-CEE------------ESE-----------------EE
T ss_pred --CCCEEEEeCCCcchHH----HHHHHhcccC--------hh-hhc------------ccc-----------------eE
Confidence 5799999999998531 1111110000 00 000 000 00
Q ss_pred cccCCCCEEEEEeCCCccccCcccccchHHHHHHHHHHHHHc-CCcEEEEccccCcceeeccccCccCCCCCeEEEECCC
Q 008343 368 VEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKY-GVDVVFNGHVHAYERSNRVYNYTLDPCGPVHITVGDG 446 (569)
Q Consensus 368 ~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~yeR~~~v~n~~~~~~g~vyIv~G~g 446 (569)
.. ...+.|++.|.|.+. +.+.+.+. +++++++||+|..+... .+++.+|..|+.
T Consensus 111 ~~--~~~~~ill~Hg~~~~---------------l~~~~~~~~~~d~vl~GHtH~~~~~~--------~~~~~~iNpGs~ 165 (190)
T 1s3l_A 111 VE--IDDLKFFITHGHHQS---------------VLEMAIKSGLYDVVIYGHTHERVFEE--------VDDVLVINPGEC 165 (190)
T ss_dssp EE--ETTEEEEEEESCCHH---------------HHHHHHHHSCCSEEEEECSSCCEEEE--------ETTEEEEECCCS
T ss_pred Ee--eCCcEEEEECCChHH---------------HHHHHHhcCCCCEEEECCCCCcceEE--------ECCEEEEECCcc
Confidence 01 113578889988653 23445555 99999999999876542 247778888887
Q ss_pred Cc
Q 008343 447 GN 448 (569)
Q Consensus 447 G~ 448 (569)
|.
T Consensus 166 ~~ 167 (190)
T 1s3l_A 166 CG 167 (190)
T ss_dssp SC
T ss_pred cc
Confidence 65
No 24
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=98.89 E-value=6.2e-09 Score=102.82 Aligned_cols=151 Identities=19% Similarity=0.214 Sum_probs=82.1
Q ss_pred CeEEEEEcccCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHHhhhh
Q 008343 208 PSRIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQP 286 (569)
Q Consensus 208 ~~rfavigD~g~~~~~-~~~~~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~~l~~ 286 (569)
.+|++++||+|..... ...++.+. ++|.++++||++.. |.. . ....+.+..
T Consensus 3 ~mri~~isDiHg~~~~l~~~l~~~~--~~d~ii~~GDl~~~------g~~------------------~--~~~~~~l~~ 54 (246)
T 3rqz_A 3 AMRILIISDVHANLVALEAVLSDAG--RVDDIWSLGDIVGY------GPR------------------P--RECVELVRV 54 (246)
T ss_dssp CCCEEEECCCTTCHHHHHHHHHHHC--SCSEEEECSCCSSS------SSC------------------H--HHHHHHHHH
T ss_pred CcEEEEEeecCCCHHHHHHHHHhcc--CCCEEEECCCcCCC------CCC------------------H--HHHHHHHHh
Confidence 5899999999954322 12233333 89999999999942 210 0 122233333
Q ss_pred hhccCCcEEecCCccccccccchhhHHhhhccCCCCCCCCCCCceeEEEEeCcEEEEEEeccccCCCCHHHHHHHHHHHh
Q 008343 287 VLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFDKSGDQYKWLEEDLA 366 (569)
Q Consensus 287 l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~LDt~~~~~~~~~Q~~WL~~~L~ 366 (569)
+ ..++++.||||..... .+.... +...... .+ .+.......++++||++...
T Consensus 55 ~---~~~~~v~GNhD~~~~~----------~~~~~~------------~~~~~~~--~~-~~~~~~l~~~~~~~L~~lp~ 106 (246)
T 3rqz_A 55 L---APNISVIGNHDWACIG----------RLSLDE------------FNPVARF--AS-YWTTMQLQAEHLQYLESLPN 106 (246)
T ss_dssp H---CSSEECCCHHHHHHTC----------CCCCC--------------CGGGGC--HH-HHHHHHCCHHHHHHHHHCCS
T ss_pred c---CCCEEEeCchHHHHhc----------cCCccc------------cCHHHHH--HH-HHHHHHcCHHHHHHHHhCCc
Confidence 3 2369999999975211 000000 0000000 00 00011235788999987544
Q ss_pred ccccCCCCEEEEEeCCCccccCcccccchHHHHHHHHHHHHHcCCcEEEEccccCc
Q 008343 367 NVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAY 422 (569)
Q Consensus 367 ~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 422 (569)
..... .|++.|.++...... +.. ....+.++|.+++++++|+||+|.-
T Consensus 107 ~~~~~----~i~~~Hg~p~~~~~~-~~~---~~~~~~~~l~~~~~~l~i~GHtH~p 154 (246)
T 3rqz_A 107 RMIDG----DWTVVHGSPRHPIWE-YIY---NARIAALNFPAFDTPLCFVGHTHVP 154 (246)
T ss_dssp EEEET----TEEEESSCSSSTTTC-CCC---SHHHHHHHGGGCCSSEEECCSSSSE
T ss_pred EEEEC----CEEEEECCcCCcccc-ccC---ChHHHHHHHhccCCCEEEECCcCcc
Confidence 33222 366678766543211 111 1245667888999999999999974
No 25
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=98.81 E-value=1.3e-08 Score=105.17 Aligned_cols=73 Identities=22% Similarity=0.391 Sum_probs=50.1
Q ss_pred eEEEEEcccCCCCCh--------------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchh
Q 008343 209 SRIAIVGDVGLTYNT--------------TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQ 274 (569)
Q Consensus 209 ~rfavigD~g~~~~~--------------~~~~~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~ 274 (569)
+||++++|+|.+... ...++.+.+.++|+||++||+++.. . +. .
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~------~------------~~----~ 58 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSS------R------------PS----P 58 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSS------S------------CC----H
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCC------C------------CC----H
Confidence 589999999987531 1234445567999999999998521 1 11 1
Q ss_pred HHHHHHHHhhhhhh-ccCCcEEecCCcccc
Q 008343 275 PRWDYWGRYMQPVL-SKVPIMVVEGNHEYE 303 (569)
Q Consensus 275 ~~wd~~~~~l~~l~-~~~P~~~v~GNHD~~ 303 (569)
..+..+.+.++.+. ..+|+++++||||..
T Consensus 59 ~~~~~~~~~l~~l~~~~~~v~~v~GNHD~~ 88 (333)
T 1ii7_A 59 GTLKKAIALLQIPKEHSIPVFAIEGNHDRT 88 (333)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEECCTTTCC
T ss_pred HHHHHHHHHHHHHHHCCCcEEEeCCcCCCc
Confidence 23344555666654 368999999999986
No 26
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=98.80 E-value=2.2e-07 Score=98.77 Aligned_cols=41 Identities=24% Similarity=0.319 Sum_probs=31.4
Q ss_pred CCeEEEEEcccCCCCCh-------------HHHHHHHHhCCCCEEEEcCCcccc
Q 008343 207 YPSRIAIVGDVGLTYNT-------------TSTVSHMISNRPDLILLVGDVTYA 247 (569)
Q Consensus 207 ~~~rfavigD~g~~~~~-------------~~~~~~l~~~~pDfvl~~GDl~Y~ 247 (569)
.++||++++|+|.+... ..+++.+.+.+||+||++||++..
T Consensus 31 ~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~ 84 (431)
T 3t1i_A 31 NTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHE 84 (431)
T ss_dssp GEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSS
T ss_pred CCEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCccccC
Confidence 47999999999987421 234455567899999999999853
No 27
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=98.78 E-value=2.5e-07 Score=97.95 Aligned_cols=41 Identities=27% Similarity=0.337 Sum_probs=31.6
Q ss_pred CCCeEEEEEcccCCCCC---------h----HHHHHHHHhCCCCEEEEcCCccc
Q 008343 206 SYPSRIAIVGDVGLTYN---------T----TSTVSHMISNRPDLILLVGDVTY 246 (569)
Q Consensus 206 ~~~~rfavigD~g~~~~---------~----~~~~~~l~~~~pDfvl~~GDl~Y 246 (569)
...+||++++|+|.+.. . .++++.+.+.+||+||++||++.
T Consensus 11 ~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd 64 (417)
T 4fbw_A 11 ENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFH 64 (417)
T ss_dssp TTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBS
T ss_pred CCCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCcccc
Confidence 34799999999998743 1 23445556789999999999985
No 28
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=98.69 E-value=1.1e-06 Score=93.97 Aligned_cols=41 Identities=27% Similarity=0.320 Sum_probs=31.8
Q ss_pred CCeEEEEEcccCCCCCh-------------HHHHHHHHhCCCCEEEEcCCcccc
Q 008343 207 YPSRIAIVGDVGLTYNT-------------TSTVSHMISNRPDLILLVGDVTYA 247 (569)
Q Consensus 207 ~~~rfavigD~g~~~~~-------------~~~~~~l~~~~pDfvl~~GDl~Y~ 247 (569)
..+||++++|+|.+... ..+++.+.+.+||+||++||++..
T Consensus 75 ~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~ 128 (472)
T 4fbk_A 75 NTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHD 128 (472)
T ss_dssp TCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSS
T ss_pred CCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCccccC
Confidence 47999999999987431 234555667899999999999853
No 29
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=98.54 E-value=4.3e-07 Score=100.19 Aligned_cols=174 Identities=18% Similarity=0.167 Sum_probs=95.0
Q ss_pred CCeEEEEEcccCCCCC------------------hHHHHHHHHhCCCC-EEEEcCCcccccccccCCCCCccccccCCCC
Q 008343 207 YPSRIAIVGDVGLTYN------------------TTSTVSHMISNRPD-LILLVGDVTYANLYLTNGTGSDCYACSFANS 267 (569)
Q Consensus 207 ~~~rfavigD~g~~~~------------------~~~~~~~l~~~~pD-fvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~ 267 (569)
..++|++++|+|.... ....++++.+..++ +++.+||++.. .
T Consensus 28 ~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~g-------s------------ 88 (552)
T 2z1a_A 28 FTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQG-------T------------ 88 (552)
T ss_dssp CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSS-------S------------
T ss_pred eeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCC-------c------------
Confidence 3699999999996421 12345566666787 88999999852 2
Q ss_pred CCccchhHHHHHHHHhhhhhhccCCcEEecCCccccccccchhhHHhhhccCCCCCC-----CCC-----CCceeEEEEe
Q 008343 268 PIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKE-----SGS-----LSKFYYSFNA 337 (569)
Q Consensus 268 ~~~e~Y~~~wd~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~-----~~~-----~~~~yYsf~~ 337 (569)
+.... .......+.|..+ -+-++++||||+.. +.+.+..+.+...+|--. .+. ....|..++.
T Consensus 89 ~~~~~--~~~~~~~~~ln~l---g~d~~~lGNHEfd~--g~~~l~~~l~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~ 161 (552)
T 2z1a_A 89 LYFNQ--YRGLADRYFMHRL---RYRAMALGNHEFDL--GPGPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVV 161 (552)
T ss_dssp HHHHH--HTTHHHHHHHHHT---TCCEEECCGGGGTT--CHHHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEE
T ss_pred HHHHH--hCCcHHHHHHHhc---CCCccccccccccC--CHHHHHHHHhhCCCCEEEEEEecCCCcccccccCCeEEEEE
Confidence 00000 0111223344443 23478899999963 223344444433332111 000 1235667788
Q ss_pred Cc--EEEEEEecccc-----------CCCCHHHHHHHHHHHhccccCCCCEEEEEeCCCccccCcccccchHHHHHHHHH
Q 008343 338 GG--IHFLMLAAYVS-----------FDKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMED 404 (569)
Q Consensus 338 G~--v~fI~LDt~~~-----------~~~~~~Q~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ 404 (569)
++ +-||.+.+... +....++.+.+.+.|++ .+...+|++.|.|.... ..
T Consensus 162 ~G~kIgiiG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~~~d---------------~~ 223 (552)
T 2z1a_A 162 GGERVGIIGLTTPDTREISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGED---------------LK 223 (552)
T ss_dssp TTEEEEEEEEECTTHHHHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHHH---------------HH
T ss_pred CCEEEEEEEecccchhhccCCCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCcchH---------------HH
Confidence 87 55566654310 00112333333344443 34556999999986321 12
Q ss_pred HHHH-cCCcEEEEccccCcce
Q 008343 405 LLYK-YGVDVVFNGHVHAYER 424 (569)
Q Consensus 405 ll~~-~~VdlvlsGH~H~yeR 424 (569)
+..+ .+||++|+||.|....
T Consensus 224 la~~~~gvDlIlgGHtH~~~~ 244 (552)
T 2z1a_A 224 LARRLVGVQVIVGGHSHTLLG 244 (552)
T ss_dssp HHTTCSSCCEEEECSSCCCBS
T ss_pred HHHhCCCccEEEeCCcCcccc
Confidence 2333 5899999999998654
No 30
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=98.48 E-value=4.3e-07 Score=99.37 Aligned_cols=190 Identities=17% Similarity=0.137 Sum_probs=93.9
Q ss_pred CCeEEEEEcccCCCCC--------h---HHHHHHHHhC----CC-CEEEEcCCcccccccccCCCCCccccccCCCCCCc
Q 008343 207 YPSRIAIVGDVGLTYN--------T---TSTVSHMISN----RP-DLILLVGDVTYANLYLTNGTGSDCYACSFANSPIH 270 (569)
Q Consensus 207 ~~~rfavigD~g~~~~--------~---~~~~~~l~~~----~p-Dfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~ 270 (569)
..++|++++|+|.... . ...++++.+. ++ +++|.+||++.. . +..
T Consensus 7 ~~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g-------~------------~~~ 67 (516)
T 1hp1_A 7 YKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTG-------V------------PES 67 (516)
T ss_dssp EEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSS-------C------------HHH
T ss_pred eEEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCC-------c------------chh
Confidence 4689999999997532 1 2334444432 46 799999999742 2 000
Q ss_pred cchhHHHHHHHHhhhhhhccCCcEEecCCccccccccchhhHHhhhccCCCC---C----CCC-CCCceeEEEEeCc--E
Q 008343 271 ETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPS---K----ESG-SLSKFYYSFNAGG--I 340 (569)
Q Consensus 271 e~Y~~~wd~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~---~----~~~-~~~~~yYsf~~G~--v 340 (569)
+. .......+.|..+ . +-++++||||+... ...+..+.+...+|- + ..+ .....|.-++.++ +
T Consensus 68 ~~--~~~~~~~~~ln~l--g-~d~~~~GNHEfd~g--~~~l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kI 140 (516)
T 1hp1_A 68 DL--QDAEPDFRGMNLV--G-YDAMAIGNHEFDNP--LTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKI 140 (516)
T ss_dssp HT--TTTHHHHHHHHHH--T-CCEEECCGGGGSSC--HHHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEE
T ss_pred hh--cCCcHHHHHHhcc--C-CCEEeeccccccCC--HHHHHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEE
Confidence 00 0112233445444 2 34788999999632 223333333323331 1 001 0123455678887 4
Q ss_pred EEEEEecccc--CC-CC-------HHHHHHHHHHHhcccc-CCCCEEEEEeCCCccccCcccccchHHHHHHHHHHHHHc
Q 008343 341 HFLMLAAYVS--FD-KS-------GDQYKWLEEDLANVER-EVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKY 409 (569)
Q Consensus 341 ~fI~LDt~~~--~~-~~-------~~Q~~WL~~~L~~~~~-~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~ 409 (569)
-||.+.+... +. .. ..-.+-+++.+++..+ .+...+|+++|.|............ ....+...+...
T Consensus 141 giiG~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~v~~l~~~~~~d~iI~l~H~g~~~~~~~~~~~~--~~~~la~~~~~~ 218 (516)
T 1hp1_A 141 AVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQELQQTEKPDIIIAATHMGHYDNGEHGSNAP--GDVEMARALPAG 218 (516)
T ss_dssp EEEEEECTTTTTSSSCCSCTTEEECCHHHHHHHHHHHHHHHTCCSEEEEEEESCCCGGGCCTTSCC--CHHHHHHHSCTT
T ss_pred EEEEecccCcccccCcCccCCcEEeCHHHHHHHHHHHHHhcCCCCEEEEEecCCccCCCcccccCc--hHHHHHHhCCCC
Confidence 5566654321 10 00 0111222333332221 2456799999999864321100000 011222223334
Q ss_pred CCcEEEEccccCcce
Q 008343 410 GVDVVFNGHVHAYER 424 (569)
Q Consensus 410 ~VdlvlsGH~H~yeR 424 (569)
+||++|+||.|...-
T Consensus 219 ~iDlilgGHtH~~~~ 233 (516)
T 1hp1_A 219 SLAMIVGGHSQDPVC 233 (516)
T ss_dssp SSSEEECCSSCCBCC
T ss_pred ceeEEECCCCCcccc
Confidence 599999999997543
No 31
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=98.40 E-value=2.8e-06 Score=93.17 Aligned_cols=188 Identities=15% Similarity=0.178 Sum_probs=95.7
Q ss_pred CeEEEEEcccCCCCC-----------------hHHHHHHHHhCCCC-EEEEcCCcccccccccCCCCCccccccCCCCCC
Q 008343 208 PSRIAIVGDVGLTYN-----------------TTSTVSHMISNRPD-LILLVGDVTYANLYLTNGTGSDCYACSFANSPI 269 (569)
Q Consensus 208 ~~rfavigD~g~~~~-----------------~~~~~~~l~~~~pD-fvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~ 269 (569)
.++|++++|+|.... ....++++.+..++ ++|..||++.. . +.
T Consensus 19 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g-------s------------~~ 79 (527)
T 3qfk_A 19 NIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQG-------S------------PF 79 (527)
T ss_dssp EEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSS-------S------------HH
T ss_pred cEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCC-------c------------HH
Confidence 699999999996431 12345566556676 77889999842 2 00
Q ss_pred ccchhH----HHHHHHHhhhhhhccCCcEEecCCccccccccchhhHHhhhccCCCCCCC-----CC--CCceeEEEEeC
Q 008343 270 HETYQP----RWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKES-----GS--LSKFYYSFNAG 338 (569)
Q Consensus 270 ~e~Y~~----~wd~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~-----~~--~~~~yYsf~~G 338 (569)
. .|-. ......+.|..+ . +-++++||||+.. +.+.+..+.....+|--.. +. ....|.-++.+
T Consensus 80 ~-~~~~~~~~~~~~~~~~ln~l--g-~D~~t~GNHefd~--G~~~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~ 153 (527)
T 3qfk_A 80 C-NYLIAHSGSSQPLVDFYNRM--A-FDFGTLGNHEFNY--GLPYLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVG 153 (527)
T ss_dssp H-HHHHHTTCSSHHHHHHHHHT--C-CCEECCCGGGGTT--CHHHHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEET
T ss_pred H-HHHhhcccCcchHHHHHHhc--C-CcEEecccccccc--CHHHHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEEC
Confidence 0 0000 012233344443 3 3367799999853 2233444444433332110 10 11336667888
Q ss_pred cE--EEEEEeccc--cCCC--------CHHHHHHHHHHHhccccCCCCEEEEEeCCCccccCc-cc-----ccchHHHHH
Q 008343 339 GI--HFLMLAAYV--SFDK--------SGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYK-AH-----YREAECMRV 400 (569)
Q Consensus 339 ~v--~fI~LDt~~--~~~~--------~~~Q~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~-~~-----~~~~~~~r~ 400 (569)
++ -||.+.+.. .+.. -....+.+++.+++.. .++..+|+++|.+...... .. ..+.. ..
T Consensus 154 G~kIgviG~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~--~~ 230 (527)
T 3qfk_A 154 DQTVGVIGLTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGENE--GY 230 (527)
T ss_dssp TEEEEEEEEECTTGGGTSCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSCC--HH
T ss_pred CEEEEEEEeccCCcccccCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccchH--HH
Confidence 74 456565431 1110 1123344555554443 3467799999987643210 00 01100 01
Q ss_pred HHHHHHHHcCCcEEEEccccCcce
Q 008343 401 AMEDLLYKYGVDVVFNGHVHAYER 424 (569)
Q Consensus 401 ~l~~ll~~~~VdlvlsGH~H~yeR 424 (569)
++..-+ ..+||++|+||.|...-
T Consensus 231 ~la~~~-~~giDlIlgGHtH~~~~ 253 (527)
T 3qfk_A 231 AMLEAF-SKDIDIFITGHQHRQIA 253 (527)
T ss_dssp HHHHHH-GGGCSEEECCSSCCEEE
T ss_pred HHHHhc-CCCCcEEEECCCCcccc
Confidence 121111 24899999999998653
No 32
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=98.39 E-value=6.3e-07 Score=86.21 Aligned_cols=76 Identities=16% Similarity=0.255 Sum_probs=47.2
Q ss_pred CeEEEEEcccCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHHhhhh
Q 008343 208 PSRIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQP 286 (569)
Q Consensus 208 ~~rfavigD~g~~~~~-~~~~~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~~l~~ 286 (569)
.+|++++||+|..... .+.++.+.+.++|+|+++||++.. |... ...+.|+ -....+.++.
T Consensus 25 mmki~~iSD~H~~~~~l~~~l~~~~~~~~d~vi~~GDl~~~------g~~~----------~~~~~~~--~~~~~~~l~~ 86 (208)
T 1su1_A 25 MMKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNH------GPRN----------ALPEGYA--PAKVVERLNE 86 (208)
T ss_dssp CCEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCC------CTTS----------CCCTTBC--HHHHHHHHHT
T ss_pred cEEEEEEEcCCCCHHHHHHHHHHHHhcCCCEEEECCCcccc------Cccc----------ccccccC--HHHHHHHHHh
Confidence 3799999999975322 234455555689999999999952 1100 0111111 1233444544
Q ss_pred hhccCCcEEecCCcccc
Q 008343 287 VLSKVPIMVVEGNHEYE 303 (569)
Q Consensus 287 l~~~~P~~~v~GNHD~~ 303 (569)
+ ..|+++++||||..
T Consensus 87 ~--~~~v~~V~GNHD~~ 101 (208)
T 1su1_A 87 V--AHKVIAVRGNCDSE 101 (208)
T ss_dssp T--GGGEEECCCTTCCH
T ss_pred c--CCceEEEECCCchH
Confidence 4 35899999999974
No 33
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=98.33 E-value=1.9e-06 Score=94.96 Aligned_cols=176 Identities=18% Similarity=0.236 Sum_probs=93.8
Q ss_pred CCeEEEEEcccCCCCC------------------h---HHHHHHHHhCCC-CEEEEcCCcccccccccCCCCCccccccC
Q 008343 207 YPSRIAIVGDVGLTYN------------------T---TSTVSHMISNRP-DLILLVGDVTYANLYLTNGTGSDCYACSF 264 (569)
Q Consensus 207 ~~~rfavigD~g~~~~------------------~---~~~~~~l~~~~p-Dfvl~~GDl~Y~d~~~~~G~~~~~~~~~~ 264 (569)
..++|++++|+|.... . ...++++.+..+ +++|.+||++....+
T Consensus 24 ~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~-------------- 89 (546)
T 4h2g_A 24 WELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIW-------------- 89 (546)
T ss_dssp EEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHH--------------
T ss_pred eEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchh--------------
Confidence 3699999999995421 1 224555555566 599999999953210
Q ss_pred CCCCCccchhHHHHHHHHhhhhhhccCCcEEecCCccccccccchhhH-HhhhccCCCCCCCC----C--------CCce
Q 008343 265 ANSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFV-AYTSRFAFPSKESG----S--------LSKF 331 (569)
Q Consensus 265 ~~~~~~e~Y~~~wd~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~-~y~~~f~~P~~~~~----~--------~~~~ 331 (569)
... .......+.|..+ . +-++++||||+... .+.+. .+.+...+|--... . ....
T Consensus 90 -----~~~--~~g~~~~~~ln~l--g-~d~~~~GNHEfd~g--~~~l~~~~~~~~~~~~l~aNv~~~~~~~p~~~~~~~~ 157 (546)
T 4h2g_A 90 -----FTV--YKGAEVAHFMNAL--R-YDAMALGNHEFDNG--VEGLIEPLLKEAKFPILSANIKAKGPLASQISGLYLP 157 (546)
T ss_dssp -----HHH--HTTHHHHHHHHHH--T-CSEEECCGGGGTTH--HHHHHTTTTTTCSSCEECSSEEECHHHHHHHBTTBBS
T ss_pred -----hhh--hCChHHHHHHHhc--C-CcEEeccCcccccC--HHHHHHHHHhhcCCCEEEEEeecCCCCCccccccCCC
Confidence 000 0112223444444 2 33678999999532 22233 33333333321100 0 1234
Q ss_pred eEEEEeCcEE--EEEEecccc--C-CC-----CHHHHHHHHHHHhccccCCCCEEEEEeCCCccccCcccccchHHHHHH
Q 008343 332 YYSFNAGGIH--FLMLAAYVS--F-DK-----SGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVA 401 (569)
Q Consensus 332 yYsf~~G~v~--fI~LDt~~~--~-~~-----~~~Q~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~ 401 (569)
|.-++.++++ ||.+.+... + .. -....+.+++.+++.+..++..+|++.|.+.... .
T Consensus 158 ~~i~~~~G~kIgiiG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~~~d------------~- 224 (546)
T 4h2g_A 158 YKVLPVGDEVVGIVGYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEMD------------K- 224 (546)
T ss_dssp EEEEEETTEEEEEEEEECTTHHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHHHH------------H-
T ss_pred eEEEEECCEEEEEEEecccccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCccch------------H-
Confidence 6667888755 455544210 0 01 1123444555555443344677999999875320 1
Q ss_pred HHHHHHH-cCCcEEEEccccCcc
Q 008343 402 MEDLLYK-YGVDVVFNGHVHAYE 423 (569)
Q Consensus 402 l~~ll~~-~~VdlvlsGH~H~ye 423 (569)
.+..+ .+||++|+||.|...
T Consensus 225 --~la~~~~giDlIlgGHtH~~~ 245 (546)
T 4h2g_A 225 --LIAQKVRGVDVVVGGHSNTFL 245 (546)
T ss_dssp --HHHHHSTTCCEEECCSSCCCC
T ss_pred --HHHHhCCCCcEEEeCCcCccc
Confidence 12222 379999999999854
No 34
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=98.32 E-value=4e-06 Score=92.96 Aligned_cols=176 Identities=18% Similarity=0.177 Sum_probs=95.4
Q ss_pred CCeEEEEEcccCCCCC-------------------h---HHHHHHHHhCCCC-EEEEcCCcccccccccCCCCCcccccc
Q 008343 207 YPSRIAIVGDVGLTYN-------------------T---TSTVSHMISNRPD-LILLVGDVTYANLYLTNGTGSDCYACS 263 (569)
Q Consensus 207 ~~~rfavigD~g~~~~-------------------~---~~~~~~l~~~~pD-fvl~~GDl~Y~d~~~~~G~~~~~~~~~ 263 (569)
..++|++++|+|.... . ...++++.+..++ ++|..||++....+
T Consensus 11 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~------------- 77 (579)
T 3ztv_A 11 VELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLY------------- 77 (579)
T ss_dssp EEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHH-------------
T ss_pred eEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcee-------------
Confidence 4699999999995421 1 1244555555666 89999999953211
Q ss_pred CCCCCCccchhHHHHHHHHhhhhhhccCCcEEecCCccccccccchhhHHhhhccCCCCCC------CCC----CCceeE
Q 008343 264 FANSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKE------SGS----LSKFYY 333 (569)
Q Consensus 264 ~~~~~~~e~Y~~~wd~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~------~~~----~~~~yY 333 (569)
...+ ......+.|..+ -+-++++||||+.. +.+.+..+.+...+|--. .+. .-..|.
T Consensus 78 ------~~~~--~g~~~~~~ln~l---g~D~~tlGNHEfd~--G~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~ 144 (579)
T 3ztv_A 78 ------FTLF--GGSADAAVMNAG---NFHYFTLGNHEFDA--GNEGLLKLLEPLKIPVLSANVIPDKSSILYNKWKPYD 144 (579)
T ss_dssp ------HHTT--TTHHHHHHHHHH---TCSEEECCSGGGTT--HHHHHHHHHTTCCSCEECSSEEECTTSTTTTSCBSEE
T ss_pred ------eeec--CCHHHHHHHHhc---CcCeeecccccccc--CHHHHHHHHHhcCCCeeeeeEeccCCcccccccCCeE
Confidence 0000 111223344443 23457899999853 233444554444444210 011 113466
Q ss_pred EEEeCc--EEEEEEec-c-----ccCCC---CHHHHHHHHHHHhccccCCCCEEEEEeCCCccccCcccccchHHHHHHH
Q 008343 334 SFNAGG--IHFLMLAA-Y-----VSFDK---SGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAM 402 (569)
Q Consensus 334 sf~~G~--v~fI~LDt-~-----~~~~~---~~~Q~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l 402 (569)
-++.++ +-||.+.+ . ..... -....+-+++.+++....+...+|+++|.+... + .
T Consensus 145 i~~~~G~kIgviG~t~~~~~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~~~---------d---~-- 210 (579)
T 3ztv_A 145 IFTVDGEKIAIIGLDTVNKTVNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGSEK---------N---I-- 210 (579)
T ss_dssp EEEETTEEEEEEEEECSHHHHHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCHHH---------H---H--
T ss_pred EEEECCEEEEEEEEEcCCccccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh---------h---H--
Confidence 678887 45666643 1 00000 112334455555554434566799999987421 0 1
Q ss_pred HHHHHH-cCCcEEEEccccCcc
Q 008343 403 EDLLYK-YGVDVVFNGHVHAYE 423 (569)
Q Consensus 403 ~~ll~~-~~VdlvlsGH~H~ye 423 (569)
.+..+ .+||++|+||.|...
T Consensus 211 -~la~~~~giDlIlgGHtH~~~ 231 (579)
T 3ztv_A 211 -EIAQKVNDIDVIVTGDSHYLY 231 (579)
T ss_dssp -HHHHHCSSCCEEEECSSCCEE
T ss_pred -HHHHhCCCCCEEEeCCCCccc
Confidence 12222 379999999999865
No 35
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=98.30 E-value=7.6e-06 Score=90.33 Aligned_cols=144 Identities=19% Similarity=0.144 Sum_probs=75.6
Q ss_pred CC-EEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHHhhhhhhccCCcEEecCCccccccccchhhHH
Q 008343 235 PD-LILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVA 313 (569)
Q Consensus 235 pD-fvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~ 313 (569)
|| ++|.+||++.. . +... + .......+.|+.+ ..+++ + ||||+.. +.+.+..
T Consensus 123 pd~Lll~~GD~~~g-------s------------~~~~-~-~~g~~~~~~ln~l--g~d~~-~-GNHEfd~--G~~~l~~ 175 (562)
T 2wdc_A 123 GKALVLDGGDTWTN-------S------------GLSL-L-TRGEAVVRWQNLV--GVDHM-V-SHWEWTL--GRERVEE 175 (562)
T ss_dssp CCEEEEECSCCSSS-------S------------HHHH-H-HTTHHHHHHHHHH--TCCEE-C-CSGGGGG--CHHHHHH
T ss_pred CCEEEEeCCCCCCc-------c------------hhhh-h-hCCHHHHHHHHhh--CCcEE-e-cchhccc--CHHHHHH
Confidence 88 89999999953 2 0000 0 0112333455555 56655 6 9999853 2334444
Q ss_pred hhhccCCCCCC-------CC-CCCceeEEEEeCc--EEEEEEeccc-------------cCCCCHHHHHHHHHHHhcccc
Q 008343 314 YTSRFAFPSKE-------SG-SLSKFYYSFNAGG--IHFLMLAAYV-------------SFDKSGDQYKWLEEDLANVER 370 (569)
Q Consensus 314 y~~~f~~P~~~-------~~-~~~~~yYsf~~G~--v~fI~LDt~~-------------~~~~~~~Q~~WL~~~L~~~~~ 370 (569)
+.+.+.+|--. .+ .....|.-++.++ +-||.+.+.. .+....+..+-+.+.|++
T Consensus 176 ~l~~~~~p~L~aNv~~~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--- 252 (562)
T 2wdc_A 176 LLGLFRGEFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARA--- 252 (562)
T ss_dssp HHHHCCSEECCSSCEETTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHHH---
T ss_pred HHHhCCCCEEEEEEEecCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHHHHH---
Confidence 44444333211 01 0123455677887 4555554421 111122333222233332
Q ss_pred CCCCEEEEEeCCCccccCcccccchHHHHHHHHHHHHH-cCCcEEEEccccCcc
Q 008343 371 EVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYK-YGVDVVFNGHVHAYE 423 (569)
Q Consensus 371 ~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~-~~VdlvlsGH~H~ye 423 (569)
.+...+|++.|.|.... ..+..+ .+||++|+||.|...
T Consensus 253 ~~~d~iIvLsH~g~~~d---------------~~la~~~~giDlIlgGHtH~~~ 291 (562)
T 2wdc_A 253 EGANAVVLLSHNGMQLD---------------AALAERIRGIDLILSGHTHDLT 291 (562)
T ss_dssp TTCSEEEEEECSCHHHH---------------HHHHTTSSSCCEEEECSSCCCC
T ss_pred CCCCEEEEEeCCCCcch---------------HHHHhcCCCCcEEEeCCCCCCC
Confidence 34667999999985320 123333 489999999999854
No 36
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=98.23 E-value=8.5e-06 Score=88.93 Aligned_cols=188 Identities=17% Similarity=0.152 Sum_probs=94.3
Q ss_pred CeEEEEEcccCCCCC----------------h---HHHHHHHHhCCCCEEEE-cCCcccccccccCCCCCccccccCCCC
Q 008343 208 PSRIAIVGDVGLTYN----------------T---TSTVSHMISNRPDLILL-VGDVTYANLYLTNGTGSDCYACSFANS 267 (569)
Q Consensus 208 ~~rfavigD~g~~~~----------------~---~~~~~~l~~~~pDfvl~-~GDl~Y~d~~~~~G~~~~~~~~~~~~~ 267 (569)
.++|++++|+|.... . ...++++.+..++.+++ +||++....+
T Consensus 6 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~~~----------------- 68 (509)
T 3ive_A 6 DVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYI----------------- 68 (509)
T ss_dssp EEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHH-----------------
T ss_pred EEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCchh-----------------
Confidence 689999999995321 1 23455555667886665 9999842100
Q ss_pred CCccchhHHHHHHHHhhhhhhccCCcEEecCCccccccccchhhHHhhhccCCCCCC-------CCCC--CceeEEEEeC
Q 008343 268 PIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKE-------SGSL--SKFYYSFNAG 338 (569)
Q Consensus 268 ~~~e~Y~~~wd~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~-------~~~~--~~~yYsf~~G 338 (569)
...+ ......+.|..+ -+-++++||||+.. +...+..+.+...+|--. .+.. ...|.-++.+
T Consensus 69 --~~~~--~g~~~~~~ln~l---g~D~~tlGNHEfd~--G~~~l~~~l~~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~ 139 (509)
T 3ive_A 69 --SSLT--KGKAIIDIMNTM---PFDAVTIGNHEFDH--GWDNTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKD 139 (509)
T ss_dssp --HHTT--TTHHHHHHHTTS---CCSEECCCGGGGTT--CHHHHHHHHTTCSSCBCCCSEEETTSCCBSSSCSEEEEEET
T ss_pred --hhhc--CChHHHHHHHhc---CCcEEeeccccccc--CHHHHHHHHhhCCCCEEEEEEEECCCCCccCcCCeEEEEEC
Confidence 0000 112233344433 34577899999863 223344444443333210 0110 2346667888
Q ss_pred cE--EEEEEeccc-----cC----C--CCHHHHHHHHHHHhccccCCCCEEEEEeCCCccccCccccc-chHHHHHHHHH
Q 008343 339 GI--HFLMLAAYV-----SF----D--KSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYR-EAECMRVAMED 404 (569)
Q Consensus 339 ~v--~fI~LDt~~-----~~----~--~~~~Q~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~-~~~~~r~~l~~ 404 (569)
++ -||.+-+.. .. . .-....+.+++.+++.+.. +..+|+++|.+.-........ +.......-..
T Consensus 140 G~kIgiiG~t~~~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~Lk~~-~D~iIvl~H~G~~~~~~~~~~~~~~~~~~~d~~ 218 (509)
T 3ive_A 140 GVKIGVIGLHGVFAFNDTVSAATRVGIEARDEIKWLQRYIDELKGK-VDLTVALIHEGVPARQSSMGGTDVRRALDKDIQ 218 (509)
T ss_dssp TEEEEEEEEECHHHHHHHSCGGGCTTEEECCHHHHHHHHHHHHTTT-CSEEEEEEECSSCCCCCCC---CCCCCCHHHHH
T ss_pred CEEEEEEecccCcccccccccccCCCCEEcCHHHHHHHHHHHHHhc-CCEEEEEeccCcCCccccccccccccccchHHH
Confidence 74 455553310 00 0 1123344555555554433 677999999885322111000 00000000112
Q ss_pred HHHH-cCCcEEEEccccCc
Q 008343 405 LLYK-YGVDVVFNGHVHAY 422 (569)
Q Consensus 405 ll~~-~~VdlvlsGH~H~y 422 (569)
+..+ .+||++|+||.|..
T Consensus 219 la~~~~giDlIlgGHtH~~ 237 (509)
T 3ive_A 219 TASQVKGLDILITGHAHVG 237 (509)
T ss_dssp HHHHCSSCCEEEEESSCCC
T ss_pred HHhcCCCCcEEEeCCcCcc
Confidence 3333 37999999999964
No 37
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=98.16 E-value=8.5e-05 Score=81.76 Aligned_cols=194 Identities=19% Similarity=0.181 Sum_probs=96.1
Q ss_pred EEcCCCCCCCCCCeEEEEEcccCCCCC--------------hHHHHHHHH----hCCCC-EEEEcCCcccccccccCCCC
Q 008343 196 FRTMPDSSSTSYPSRIAIVGDVGLTYN--------------TTSTVSHMI----SNRPD-LILLVGDVTYANLYLTNGTG 256 (569)
Q Consensus 196 F~T~P~~g~~~~~~rfavigD~g~~~~--------------~~~~~~~l~----~~~pD-fvl~~GDl~Y~d~~~~~G~~ 256 (569)
+-++|........++|++++|+|.... ..+.+..+. +.+++ ++|.+||++....+.+
T Consensus 3 ~~s~p~~~~~~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~---- 78 (557)
T 3c9f_A 3 LASFPHRNLTWNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSD---- 78 (557)
T ss_dssp --CCCBCCCCCCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHH----
T ss_pred cccCCCCCCCceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchh----
Confidence 445565554556899999999997521 122222222 25787 5799999995321100
Q ss_pred CccccccCCCCCCccchhHHHHHHHHhhhhhhccCCcEEecCCcccccccc-chhhHHhhhccCCCC---C-----CCCC
Q 008343 257 SDCYACSFANSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAE-NRTFVAYTSRFAFPS---K-----ESGS 327 (569)
Q Consensus 257 ~~~~~~~~~~~~~~e~Y~~~wd~~~~~l~~l~~~~P~~~v~GNHD~~~~~~-~~~~~~y~~~f~~P~---~-----~~~~ 327 (569)
.+........+.|..+ . .=++++||||+..... ...+........+|- + +.+.
T Consensus 79 ---------------~~~~~g~~~~~~ln~l--g-~Da~tlGNHEfD~G~~~l~~~~~~l~~a~fp~L~ANv~~~~~~g~ 140 (557)
T 3c9f_A 79 ---------------ITSPNGLKSTPIFIKQ--D-YDLLTIGNHELYLWENSKQEYETVVNHFQDKYVCSNVDIRLDNGL 140 (557)
T ss_dssp ---------------SSSSTTTTTHHHHTTS--C-CSEECCCGGGSSSHHHHHHHHHHHHHHTTTTBBCSSEEEECTTSC
T ss_pred ---------------hcccCCHHHHHHHHhc--C-CCEEeecchhcccchHHHHHHHHHHHhCCCCEEEeecccccccCC
Confidence 0000001112334443 2 3367889999974311 012332233333332 1 1111
Q ss_pred ---CCceeEEEEe--CcE--EEEEEeccccCC------CCHHH---HHHHHHHHhccccCCCCEEEEEeCCCccccCccc
Q 008343 328 ---LSKFYYSFNA--GGI--HFLMLAAYVSFD------KSGDQ---YKWLEEDLANVEREVTPWLVATWHAPWYSTYKAH 391 (569)
Q Consensus 328 ---~~~~yYsf~~--G~v--~fI~LDt~~~~~------~~~~Q---~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~ 391 (569)
....|.-++. +++ -||.+.+..... ....+ .+|+++.++ .++..+|+++|.+.....
T Consensus 141 ~~~~~~py~I~e~~~~G~kIgiiGlt~~~~~~~~~~~~~d~~e~i~~~~v~~l~~----~~~D~IIvL~H~G~~~~~--- 213 (557)
T 3c9f_A 141 FVPLGLKYKYFTTPIRGIRVMAFGFLFDFKRFNSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHNW--- 213 (557)
T ss_dssp EEESSBSCEEEECTTTCCEEEEEECCCCCCCCCTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTTT---
T ss_pred ccccCCCeEEEEEccCCEEEEEEEeecCCCCCCCCcEECCHHHHHHHHHHHHHHh----cCCCEEEEecccCccccC---
Confidence 1234666787 775 455554431100 01112 146665442 356789999999873111
Q ss_pred ccchHHHHHHHHHHHHH--cCCcE-EEEccccCcc
Q 008343 392 YREAECMRVAMEDLLYK--YGVDV-VFNGHVHAYE 423 (569)
Q Consensus 392 ~~~~~~~r~~l~~ll~~--~~Vdl-vlsGH~H~ye 423 (569)
.+. ......+.+ .+||+ +|+||.|...
T Consensus 214 -d~~----~~~~~~lA~~~~giDilIlgGHtH~~~ 243 (557)
T 3c9f_A 214 -GEF----YQVHQYLRQFFPDTIIQYFGGHSHIRD 243 (557)
T ss_dssp -CHH----HHHHHHHHHHCTTSEEEEEECSSCCEE
T ss_pred -ccc----cHHHHHHHHhCCCCCEEEECCCCCCCC
Confidence 111 112222233 48995 9999999873
No 38
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=98.13 E-value=3.9e-05 Score=76.86 Aligned_cols=190 Identities=18% Similarity=0.232 Sum_probs=100.6
Q ss_pred CeEEEEEcccCCCCChH---HHHHHHHhC-CCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHHh
Q 008343 208 PSRIAIVGDVGLTYNTT---STVSHMISN-RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRY 283 (569)
Q Consensus 208 ~~rfavigD~g~~~~~~---~~~~~l~~~-~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~~ 283 (569)
.+||+++||.+...... ..++++.+. ++|+++..||.+.. |. ++. ....+.
T Consensus 4 ~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d~vi~Ngen~~g------G~------------g~~-------~~~~~~ 58 (281)
T 1t71_A 4 SIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTH------GK------------GLS-------LKHYEF 58 (281)
T ss_dssp CCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTT------TS------------SCC-------HHHHHH
T ss_pred eEEEEEECCcCChHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCC------CC------------CcC-------HHHHHH
Confidence 58999999998542222 234455443 68999999998852 32 111 112233
Q ss_pred hhhhhccCCcEEecCCccccccccchhhHHhhhc--c----CCCCCCCC-CCCceeEEEEeCc--EEEEEEeccccCC--
Q 008343 284 MQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSR--F----AFPSKESG-SLSKFYYSFNAGG--IHFLMLAAYVSFD-- 352 (569)
Q Consensus 284 l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~--f----~~P~~~~~-~~~~~yYsf~~G~--v~fI~LDt~~~~~-- 352 (569)
|..+ .+- .++.||||+.... + ...|.+. . ++|..... ..+..|.-++.++ +-+|.|-+...+.
T Consensus 59 ln~~--G~D-a~TlGNHefD~g~--~-~~~~l~~~~~v~~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~ 132 (281)
T 1t71_A 59 LKEA--GVN-YITMGNHTWFQKL--D-LAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPF 132 (281)
T ss_dssp HHHH--TCC-EEECCTTTTCCGG--G-HHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSS
T ss_pred HHhc--CCC-EEEEccCcccCCc--c-HHHHhhhcCEEeeccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCc
Confidence 3333 233 4667999997541 1 2223222 1 22321100 0234567788887 4455554543122
Q ss_pred CCHHHHHHHHHHHhccccCCCCEEEEEeCCCccccCcccccchHHHHHHHHHHHHHcCCcEEEEccccCcceeeccccCc
Q 008343 353 KSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYT 432 (569)
Q Consensus 353 ~~~~Q~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~v~n~~ 432 (569)
.-..-.+.+++.++ +.+++.+|+.+|--. ....+.+.. .-.-+||+++.||+|.......
T Consensus 133 ~~~~pf~~a~~~v~---~~~~diIIv~~H~g~-----------t~Ek~~la~-~~dg~VD~VvGgHTHv~t~d~~----- 192 (281)
T 1t71_A 133 KTTNPFKVLKELIL---KRDCDLHIVDFHAET-----------TSEKNAFCM-AFDGYVTTIFGTHTHVPSADLR----- 192 (281)
T ss_dssp CBCCHHHHHHHHHT---TCCCSEEEEEEECSC-----------HHHHHHHHH-HHTTTSSEEEEESSSSCCTTCE-----
T ss_pred cccCHHHHHHHHHh---hcCCCEEEEEeCCCc-----------hHHHHHHHH-hCCCCeEEEEeCCCCcCCCceE-----
Confidence 12222444566655 346778999999521 111122222 1223699999999998654321
Q ss_pred cCCCCCeEEE-ECCCCc
Q 008343 433 LDPCGPVHIT-VGDGGN 448 (569)
Q Consensus 433 ~~~~g~vyIv-~G~gG~ 448 (569)
.-++|+.||+ .|..|.
T Consensus 193 il~~gt~~i~d~G~~G~ 209 (281)
T 1t71_A 193 ITPKGSAYITDVGMCGP 209 (281)
T ss_dssp ECTTSCEEESCCCEEBC
T ss_pred EecCCcEEEecCccccC
Confidence 1247888887 344444
No 39
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=98.10 E-value=1.9e-06 Score=83.35 Aligned_cols=39 Identities=28% Similarity=0.419 Sum_probs=26.8
Q ss_pred CeEEEEEcccCCCCCh-HHHHHHHHh-CCCCEEEEcCCccc
Q 008343 208 PSRIAIVGDVGLTYNT-TSTVSHMIS-NRPDLILLVGDVTY 246 (569)
Q Consensus 208 ~~rfavigD~g~~~~~-~~~~~~l~~-~~pDfvl~~GDl~Y 246 (569)
.+|++++||+|..... .+.++.+.. .++|.++++||++.
T Consensus 12 ~~~i~visDiHg~~~~l~~~l~~~~~~~~~d~~i~~GD~~~ 52 (221)
T 1g5b_A 12 YRNIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVD 52 (221)
T ss_dssp CSCEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSS
T ss_pred CceEEEEEcCCCCHHHHHHHHHHccCCCCCCEEEEeCCccC
Confidence 4799999999964221 223333332 26899999999995
No 40
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=98.08 E-value=6.6e-05 Score=73.96 Aligned_cols=188 Identities=21% Similarity=0.297 Sum_probs=98.9
Q ss_pred eEEEEEcccCCCCCh---HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHHhhh
Q 008343 209 SRIAIVGDVGLTYNT---TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQ 285 (569)
Q Consensus 209 ~rfavigD~g~~~~~---~~~~~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~~l~ 285 (569)
+||+++||.=..... ...+.++.+.. |+++..|..+. .|.. +. ....+.|.
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~~-d~vi~ngen~~------~G~g------------~~-------~~~~~~l~ 54 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDRY-DLVIANGENAA------RGKG------------LD-------RRSYRLLR 54 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGGC-SEEEEECTTTT------TTSS------------CC-------HHHHHHHH
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHHhhC-CEEEEeCCCcc------CCCC------------cC-------HHHHHHHH
Confidence 589999997432221 23455555556 99888776653 2331 11 11223343
Q ss_pred hhhccCCcEEecCCccccccccchhhHHhhhcc--CCCCCC-CCCCCceeEEEEeCcEEEEEEe--ccccCCCCHHHHHH
Q 008343 286 PVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRF--AFPSKE-SGSLSKFYYSFNAGGIHFLMLA--AYVSFDKSGDQYKW 360 (569)
Q Consensus 286 ~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f--~~P~~~-~~~~~~~yYsf~~G~v~fI~LD--t~~~~~~~~~Q~~W 360 (569)
.+ .+-. ++.||||+... ....|.+.. -.|.+- .+.....|.-++.++.++-+++ +......-..-.+-
T Consensus 55 ~~--G~D~-~T~GNHefD~~----~l~~~l~~~~~vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~ 127 (252)
T 2z06_A 55 EA--GVDL-VSLGNHAWDHK----EVYALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRA 127 (252)
T ss_dssp HH--TCCE-EECCTTTTSCT----THHHHHHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHH
T ss_pred hC--CCCE-EEeccEeeECc----hHHHHhccCCceEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHH
Confidence 33 4444 47799999753 223333221 112221 1122456777888886655544 33221111222333
Q ss_pred HHHHHhccccCCCCEEEEEeCCCccccCcccccchHHHHHHHHHHHHHcCCcEEEEccccCcceeeccccCccCCCCCeE
Q 008343 361 LEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCGPVH 440 (569)
Q Consensus 361 L~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~v~n~~~~~~g~vy 440 (569)
+++.+++.+ ++.+|+.+|--.. ...+.+. .+..-+||+|+.||+|...... ..-++|+.|
T Consensus 128 ~~~~v~~lk---~d~IIv~~H~g~t-----------sek~~la-~~~dg~Vd~VvGgHTHv~t~d~-----~il~~gt~~ 187 (252)
T 2z06_A 128 LDRLLEEEK---ADYVLVEVHAEAT-----------SEKMALA-HYLDGRASAVLGTHTHVPTLDA-----TRLPKGTLY 187 (252)
T ss_dssp HHHHHHHCC---CSEEEEEEECSCH-----------HHHHHHH-HHHBTTBSEEEEESSCSCBSCC-----EECTTSCEE
T ss_pred HHHHHHHhC---CCEEEEEeCCCcH-----------HHHHHHH-HhCCCCeEEEEcCCCCcCCCcc-----EEcCCCcEe
Confidence 555565543 6679999995321 1112222 1223469999999999854432 223578888
Q ss_pred EE-ECCCCcc
Q 008343 441 IT-VGDGGNR 449 (569)
Q Consensus 441 Iv-~G~gG~~ 449 (569)
|+ .|..|..
T Consensus 188 itd~G~~G~y 197 (252)
T 2z06_A 188 QTDVGMTGTY 197 (252)
T ss_dssp ESCCCCBEES
T ss_pred ecCCcccccC
Confidence 87 4555554
No 41
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=98.02 E-value=0.0001 Score=72.78 Aligned_cols=188 Identities=18% Similarity=0.196 Sum_probs=98.9
Q ss_pred eEEEEEcccCCCCCh---HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCccccccCCCCCCccchhHHHHHHHHhhh
Q 008343 209 SRIAIVGDVGLTYNT---TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQ 285 (569)
Q Consensus 209 ~rfavigD~g~~~~~---~~~~~~l~~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~~e~Y~~~wd~~~~~l~ 285 (569)
+||+++||.=..... ...++++.+.. |+++..|+.+.. |.. +. + ...+.|.
T Consensus 1 m~ilf~GDv~g~~G~~~~~~~l~~lr~~~-d~vi~nge~~~~------G~g------------~~---~----~~~~~l~ 54 (255)
T 1t70_A 1 MRVLFIGDVFGQPGRRVLQNHLPTIRPQF-DFVIVNMENSAG------GFG------------MH---R----DAARGAL 54 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHHGGGC-SEEEEECTBTTT------TSS------------CC---H----HHHHHHH
T ss_pred CEEEEEeccCChHHHHHHHHHHHHHHhhC-CEEEECCCCccC------CcC------------CC---H----HHHHHHH
Confidence 589999997422111 22345555555 999988887742 321 11 1 1123333
Q ss_pred hhhccCCcEEecCCccccccccchhhHHhhhccC----CCCCC--CCCCCceeEEEEeCc--EEEEEEeccccCCCCHHH
Q 008343 286 PVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFA----FPSKE--SGSLSKFYYSFNAGG--IHFLMLAAYVSFDKSGDQ 357 (569)
Q Consensus 286 ~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~----~P~~~--~~~~~~~yYsf~~G~--v~fI~LDt~~~~~~~~~Q 357 (569)
.+ .+- .++.||||+... ....|.+... .|.+- .+..+..|.-++.++ +-+|.|-+......-..-
T Consensus 55 ~~--G~D-a~TlGNHefD~~----~l~~~l~~~~~~~~~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p 127 (255)
T 1t70_A 55 EA--GAG-CLTLGNHAWHHK----DIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNP 127 (255)
T ss_dssp HH--TCS-EEECCTTTTSST----THHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCH
T ss_pred hC--CCC-EEEeccccccCc----hHHHHHhhCCCcEEEEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCH
Confidence 33 333 456699999742 2223322211 23221 122345666788877 445555454222122223
Q ss_pred HHHHHHHHhccccCCCCEEEEEeCCCccccCcccccchHHHHHHHHHHHHHcCCcEEEEccccCcceeeccccCccCCCC
Q 008343 358 YKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCG 437 (569)
Q Consensus 358 ~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~v~n~~~~~~g 437 (569)
.+-+++.+++. +++.+|+.+|--. ....+.+.. ...-+||+++.||+|.......+ -++|
T Consensus 128 ~~~~~~~v~~l---~~d~IIv~~H~e~-----------t~Ek~~la~-~~dg~vd~VvGgHTHv~~~d~~i-----l~~g 187 (255)
T 1t70_A 128 FRTMDALLERD---DLGTVFVDFHAEA-----------TSEKEAMGW-HLAGRVAAVIGTHTHVPTADTRI-----LKGG 187 (255)
T ss_dssp HHHHHHHTTCS---SCCEEEEEEECSC-----------HHHHHHHHH-HHTTSSSEEEEESSCSCBSCCEE-----ETTT
T ss_pred HHHHHHHHHHh---CCCEEEEEeCCCC-----------hHHHHHHHH-hCCCCeEEEEeCCCCcCCCceEE-----cCCC
Confidence 34466666665 4677999999411 111122222 22335999999999975543211 2468
Q ss_pred CeEEE-ECCCCcc
Q 008343 438 PVHIT-VGDGGNR 449 (569)
Q Consensus 438 ~vyIv-~G~gG~~ 449 (569)
+.||+ .|..|..
T Consensus 188 t~~i~d~G~~G~y 200 (255)
T 1t70_A 188 TAYQTDAGFTGPH 200 (255)
T ss_dssp EEEESCCCCBEES
T ss_pred eEEEEcCcccccC
Confidence 88877 4655554
No 42
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=97.86 E-value=0.00015 Score=74.86 Aligned_cols=59 Identities=22% Similarity=0.282 Sum_probs=32.8
Q ss_pred HHHHHHHhccccCCCCEEEEEeCCCccccCcccccchHHHHHHHHHHHHH-cCCcEEEEccccCc
Q 008343 359 KWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYK-YGVDVVFNGHVHAY 422 (569)
Q Consensus 359 ~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~-~~VdlvlsGH~H~y 422 (569)
+.+++.+++.+..++..+|+++|-..-........+.. .. .|..+ -+||++|.||.|..
T Consensus 194 ~~~~~~v~~Lk~~g~D~II~l~H~G~~~d~~~~~~e~~--~~---~lA~~v~giD~IigGHsH~~ 253 (341)
T 3gve_A 194 ESANETIPKMKAEGADVIIALAHTGIEKQAQSSGAENA--VF---DLATKTKGIDAIISGHQHGL 253 (341)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECCCCCSSCCCTTCSSC--HH---HHHHHCSCCCEEEECSSCCE
T ss_pred HHHHHHHHHHHhcCCCEEEEEeccCccccccccccchh--HH---HHHhcCCCCcEEEECCCCcc
Confidence 33444444433345778999999876432111001110 11 12222 48999999999985
No 43
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=97.70 E-value=0.00082 Score=69.29 Aligned_cols=39 Identities=18% Similarity=0.158 Sum_probs=27.6
Q ss_pred CeEEEEEcccCCCCC--------------h---HHHHHHHHhCCCC-EEEEcCCccc
Q 008343 208 PSRIAIVGDVGLTYN--------------T---TSTVSHMISNRPD-LILLVGDVTY 246 (569)
Q Consensus 208 ~~rfavigD~g~~~~--------------~---~~~~~~l~~~~pD-fvl~~GDl~Y 246 (569)
.++|+..+|+|.... . ...++++.+..++ ++|..||++.
T Consensus 8 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~q 64 (339)
T 3jyf_A 8 DLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQ 64 (339)
T ss_dssp EEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSS
T ss_pred eEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCC
Confidence 689999999996421 1 2345566666665 7789999995
No 44
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=97.62 E-value=0.0008 Score=73.60 Aligned_cols=173 Identities=19% Similarity=0.224 Sum_probs=87.6
Q ss_pred CCeEEEEEcccCCCC------------------ChH---HHHHHHHhCCCC-EEEEcCCcccccccccCCCCCccccccC
Q 008343 207 YPSRIAIVGDVGLTY------------------NTT---STVSHMISNRPD-LILLVGDVTYANLYLTNGTGSDCYACSF 264 (569)
Q Consensus 207 ~~~rfavigD~g~~~------------------~~~---~~~~~l~~~~pD-fvl~~GDl~Y~d~~~~~G~~~~~~~~~~ 264 (569)
+.++|+..+|+|... ... ..++++.+.+++ ++|..||++.. +
T Consensus 2 f~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qG-------s--------- 65 (530)
T 4h1s_A 2 WELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQG-------T--------- 65 (530)
T ss_dssp CEEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCS-------S---------
T ss_pred EEEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccc-------h---------
Confidence 357999999998532 111 234555555665 67889999953 2
Q ss_pred CCCCCccchhHHHHHHHHhhhhhhccCCcEEecCCccccccccchhh-HHhhhccCCCCCCC------------CCCCce
Q 008343 265 ANSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTF-VAYTSRFAFPSKES------------GSLSKF 331 (569)
Q Consensus 265 ~~~~~~e~Y~~~wd~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~-~~y~~~f~~P~~~~------------~~~~~~ 331 (569)
+....+ +.....+.|..+ -.=..++||||+... .+.+ ..+.....+|--.. ...-..
T Consensus 66 ---~~~~~~--~g~~~i~~mN~l---gyDa~~lGNHEFd~G--~~~l~~~~~~~a~fp~L~aNv~~~~~~~~~~~~~~~p 135 (530)
T 4h1s_A 66 ---IWFTVY--KGAEVAHFMNAL---RYDAMALGNHEFDNG--VEGLIEPLLKEAKFPILSANIKAKGPLASQISGLYLP 135 (530)
T ss_dssp ---HHHHHH--TTHHHHHHHHHT---TCCEEECCGGGGTTT--THHHHTTTTTTCSSCEECTTEEECTTHHHHHTTTSBS
T ss_pred ---HHHHHh--CChHHHHHHhcc---CCCEEEEchhhhccC--HHHHHHHHHhhCCCCEEEEeeeccCCcccccCCcccc
Confidence 111111 111122334333 223678999999632 1222 12222223332100 011234
Q ss_pred eEEEEeCcEE--EEEEeccc-----c------CCCCHHHHHHHHHHHhccccCCCCEEEEEeCCCccccCcccccchHHH
Q 008343 332 YYSFNAGGIH--FLMLAAYV-----S------FDKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECM 398 (569)
Q Consensus 332 yYsf~~G~v~--fI~LDt~~-----~------~~~~~~Q~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~ 398 (569)
|.-++.++++ ||.+-+.. . +...-+..+...+.|++ .++..+|++.|..+.. .
T Consensus 136 y~I~~~~g~kIgviGltt~~~~~~~~~~~~~~f~d~v~~~~~~v~~Lr~---~g~D~II~LsH~G~~~--------d--- 201 (530)
T 4h1s_A 136 YKVLPVGDEVVGIVGYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGHSGFEM--------D--- 201 (530)
T ss_dssp EEEEEETTEEEEEEEEECTTHHHHSCCCTTEEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHH--------H---
T ss_pred eEEEEeccEEEeeccccccceeeeccCCCCcccCcHHHHHHHHHhhhhh---cCCCEEEEeccCCchH--------H---
Confidence 6678888855 45554321 0 11112222333334443 3566799999965311 0
Q ss_pred HHHHHHHHHHc-CCcEEEEccccCcc
Q 008343 399 RVAMEDLLYKY-GVDVVFNGHVHAYE 423 (569)
Q Consensus 399 r~~l~~ll~~~-~VdlvlsGH~H~ye 423 (569)
..+.++. +||++|.||+|.+-
T Consensus 202 ----~~la~~v~giD~IlgGHsH~~~ 223 (530)
T 4h1s_A 202 ----KLIAQKVRGVDVVVGGHSNTFL 223 (530)
T ss_dssp ----HHHHHHSTTCCEEECCSSCCCB
T ss_pred ----HHHHhcCCCCCeeccCCcccee
Confidence 1233333 79999999999753
No 45
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.63 E-value=0.018 Score=48.26 Aligned_cols=96 Identities=19% Similarity=0.216 Sum_probs=59.0
Q ss_pred CCCCeEEEEecC-CCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCc--eEEEeEEEEeeeecccCCccccc
Q 008343 84 FEPEQISVSLSS-AHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLN--RKATGRSLVYSQLYPFLGLQNYT 160 (569)
Q Consensus 84 ~~P~qi~ls~~~-~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~--~~~~g~~~~y~~~~p~~g~~~~~ 160 (569)
..|..+.+.... +++++.|+|.......|. ...=.|+|....+... .... ..
T Consensus 10 ~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~--------i~~Y~v~~~~~~~~~~~~~~~~----~~------------- 64 (114)
T 2ede_A 10 SAPKDLTVITREGKPRAVIVSWQPPLEANGK--------ITAYILFYTLDKNIPIDDWIME----TI------------- 64 (114)
T ss_dssp SCCEEEEEEECSSCSSCEEEEEECCSSCSSC--------CSEEEEEEESCSSSCTTTSEEE----EE-------------
T ss_pred CCCcceEEEEccCCCCEEEEEECCCCCCCCc--------eeEEEEEEEeCCCCCccceEEE----EE-------------
Confidence 468888777653 478999999865321110 1123577765432211 0100 00
Q ss_pred cCeEEEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCCCC
Q 008343 161 SGIIHHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDSSS 204 (569)
Q Consensus 161 ~~~~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~g~ 204 (569)
.+....++|++|+|+|.|.+||...+. ..+|+...|+|.+.+.+
T Consensus 65 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp 111 (114)
T 2ede_A 65 SGDRLTHQIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKVSGP 111 (114)
T ss_dssp ETTCCEEEECSCCSSCEEEEEEEEECSSCBCCCCCCEEEECCCSSCC
T ss_pred CCCceEEEEcCCCCCCEEEEEEEEEeCCcCcCCcccEEEEecCCCCC
Confidence 011245789999999999999965442 36788899999876654
No 46
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.49 E-value=0.012 Score=49.27 Aligned_cols=92 Identities=12% Similarity=0.113 Sum_probs=53.9
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCeE
Q 008343 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (569)
Q Consensus 85 ~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~~ 164 (569)
.|..+.+...-..+++.|+|......-|..+ ..=.|+|....+..+..+. .. ..
T Consensus 11 ~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~i-------~~Y~v~~~~~~~~~~~~~~-~~------------------~~ 64 (110)
T 2crz_A 11 PCLPPRLQGRPKAKEIQLRWGPPLVDGGSPI-------SCYSVEMSPIEKDEPREVY-QG------------------SE 64 (110)
T ss_dssp CCCCCEECSCCCSSEEEEECCCCSCCTTSCC-------CEEEEEEECTTSCCCEEEE-EE------------------SC
T ss_pred CCCCceeccccCCCEEEEEeCCCCCCCCcee-------EEEEEEEEeCCCCceEEEE-eC------------------Cc
Confidence 4666666433346789999964321111111 1235677654433332221 00 11
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~ 202 (569)
..++|++|+|+|.|.|||...+. ..+|+...++|.+.+
T Consensus 65 ~~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~~~~~T~~~~ 105 (110)
T 2crz_A 65 VECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAPGS 105 (110)
T ss_dssp SEEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCCSC
T ss_pred EEEEECCcCCCCEEEEEEEEEcCCccCCCCCccccccCCCC
Confidence 34578999999999999965442 367888899988654
No 47
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.48 E-value=0.011 Score=49.39 Aligned_cols=37 Identities=27% Similarity=0.345 Sum_probs=29.6
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008343 166 HVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (569)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~ 202 (569)
.+.|+||+|+|.|.|||...+. ..+|+...++|.+..
T Consensus 62 ~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~v~~~T~~~~ 101 (106)
T 1x4x_A 62 SYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPSS 101 (106)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCCCC
T ss_pred eEEEcCCCCCCEEEEEEEEEcCCcCCCCcCCEEEECCCCC
Confidence 4578999999999999975442 357888999998764
No 48
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=96.46 E-value=0.021 Score=48.22 Aligned_cols=40 Identities=18% Similarity=0.162 Sum_probs=31.5
Q ss_pred EEEEeCCCCCCCEEEEEEecCC---CCCccceeEEEcCCCCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRTMPDSSS 204 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~P~~g~ 204 (569)
..++|++|+|+|.|.+||...+ ...+|+...++|.+.+.+
T Consensus 69 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~~~p 111 (114)
T 1x4y_A 69 YWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKARSGP 111 (114)
T ss_dssp CEEEECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECCCCCCS
T ss_pred eEEEcCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCCCCC
Confidence 3578999999999999996533 236888999999876544
No 49
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.38 E-value=0.016 Score=48.40 Aligned_cols=40 Identities=25% Similarity=0.298 Sum_probs=31.9
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDSSS 204 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~g~ 204 (569)
..+.|++|+|+|.|.+||...+. ..+|+...|+|.+.+++
T Consensus 66 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~p 108 (111)
T 1x5l_A 66 TRATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGKPSGP 108 (111)
T ss_dssp SEEEECSCCTTCEEEECEEEEETTEECCCCCCEEEECCCTTSC
T ss_pred CEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEEcCCCCCC
Confidence 35688999999999999965432 36889999999887654
No 50
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.32 E-value=0.061 Score=46.32 Aligned_cols=37 Identities=27% Similarity=0.263 Sum_probs=30.4
Q ss_pred EEEEeCCCCCCCEEEEEEecCC---CCCccceeEEEcCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRTMPD 201 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~P~ 201 (569)
..+.|+||+|+|.|.++|...+ .+.||....|+|.+.
T Consensus 78 ~~~~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 78 LSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp SEEEEESCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred eEEEecCCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 3578999999999999996543 247888999999876
No 51
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=96.22 E-value=0.0025 Score=63.09 Aligned_cols=38 Identities=24% Similarity=0.355 Sum_probs=25.5
Q ss_pred eEEEEEcccCCCCCh-HHHHHHHHhCCC-CEEEEcCCccc
Q 008343 209 SRIAIVGDVGLTYNT-TSTVSHMISNRP-DLILLVGDVTY 246 (569)
Q Consensus 209 ~rfavigD~g~~~~~-~~~~~~l~~~~p-Dfvl~~GDl~Y 246 (569)
.|++++||+|..... .++++.+....+ |.+|++||++.
T Consensus 19 ~~i~visDiHg~~~~l~~~l~~~~~~~~~d~ii~~GD~vd 58 (262)
T 2qjc_A 19 GRVIIVGDIHGCRAQLEDLLRAVSFKQGSDTLVAVGDLVN 58 (262)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTCCTTTSEEEECSCCSS
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHhccCCCCEEEEecCCCC
Confidence 489999999954211 223333333344 99999999995
No 52
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.18 E-value=0.053 Score=45.70 Aligned_cols=93 Identities=19% Similarity=0.256 Sum_probs=56.1
Q ss_pred CCCeEEEEecCCCCceEEEEEcCc-ccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008343 85 EPEQISVSLSSAHDSVWISWITGE-FQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (569)
Q Consensus 85 ~P~qi~ls~~~~p~s~~I~W~T~~-~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~ 163 (569)
.|..+.+... +.+++.|+|.-.. ...| . ...=.|+|........... . . ...-
T Consensus 20 ~P~~l~~~~~-~~~sv~l~W~~p~~~~~g-~-------i~~Y~v~~~~~~~~~~~~~-------~-~---------~~~~ 73 (120)
T 1x5f_A 20 APRDVVASLV-STRFIKLTWRTPASDPHG-D-------NLTYSVFYTKEGIARERVE-------N-T---------SHPG 73 (120)
T ss_dssp CCEEEEEEEE-CSSCEEEEEECCSSCSSC-C-------SSEEEEEEEETTCCCCEEE-------E-C---------SSTT
T ss_pred CCCCcEEEec-CCCEEEEEECCCCCCCCC-c-------EEEEEEEEEECCCCCceEE-------E-e---------ccCC
Confidence 5777766544 3689999998643 1111 1 1123577765543222110 0 0 0011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCC---CccceeEEEcCCCCC
Q 008343 164 IHHVRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTMPDSS 203 (569)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~P~~g 203 (569)
...+.|++|+|+|.|.+||...+.. .+|+...|+|.+...
T Consensus 74 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 116 (120)
T 1x5f_A 74 EMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPESG 116 (120)
T ss_dssp CSEEEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCCCCC
T ss_pred ccEEEeCCCCCCCEEEEEEEEECCCccCCCCCCEEEEeCCCCC
Confidence 2457899999999999999765432 568888999987543
No 53
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1
Probab=96.05 E-value=0.024 Score=47.13 Aligned_cols=36 Identities=31% Similarity=0.427 Sum_probs=29.1
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMP 200 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P 200 (569)
..++|+||+|+|.|.+||...+. +.+|+...|+|+|
T Consensus 66 ~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 66 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCccCCCcCCEeeEEec
Confidence 35689999999999999965432 3678889999987
No 54
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=96.01 E-value=0.0037 Score=62.62 Aligned_cols=38 Identities=21% Similarity=0.307 Sum_probs=24.6
Q ss_pred eEEEEEcccCCCCCh-HHHHHHHHh-CCCCEEEEcCCccc
Q 008343 209 SRIAIVGDVGLTYNT-TSTVSHMIS-NRPDLILLVGDVTY 246 (569)
Q Consensus 209 ~rfavigD~g~~~~~-~~~~~~l~~-~~pDfvl~~GDl~Y 246 (569)
++++++||+|..... ...++.+.. .++|.+|++||++.
T Consensus 1 M~i~vigDiHG~~~~l~~ll~~~~~~~~~d~~v~lGD~vd 40 (280)
T 2dfj_A 1 MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVA 40 (280)
T ss_dssp -CEEEECCCCSCHHHHHHHHHHTTCCTTTCEEEECSCCSS
T ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCcCC
Confidence 478999999965321 122232222 35799999999995
No 55
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.99 E-value=0.026 Score=47.97 Aligned_cols=95 Identities=23% Similarity=0.281 Sum_probs=54.6
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008343 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (569)
Q Consensus 84 ~~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~ 163 (569)
..|.+|++.--. .+++.|+|.-.....+..+ .....=.|+|.......... .+. ..-
T Consensus 10 ~~P~~l~~~~~s-~tsi~lsW~~p~~~~~~~~----~~~~~Y~v~y~~~~~~~~~~------~~~------------~~~ 66 (113)
T 1x5j_A 10 MPPVGVQASILS-HDTIRITWADNSLPKHQKI----TDSRYYTVRWKTNIPANTKY------KNA------------NAT 66 (113)
T ss_dssp CCCEEEEEEEEE-TTEEEEEEECTTSCSSSCC----CSSCEEEEEECBSSSSSCCC------EEC------------CBC
T ss_pred CCCcceEEEEec-CCEEEEEecCCCCcccccc----CcCceEEEEEEECCCCCeEE------EEE------------ecC
Confidence 458888765433 7899999986432111000 00012356776521111100 000 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCC
Q 008343 164 IHHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPD 201 (569)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~ 201 (569)
...+.|+||+|+|.|.++|...+. +.+|....++|.+.
T Consensus 67 ~~~~~i~gL~P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 67 TLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp SSEEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECCCS
T ss_pred cCEEEeCCCCCCcEEEEEEEEecCCccCCCcccEEeeccCC
Confidence 236789999999999999965432 36888899999875
No 56
>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.97 E-value=0.041 Score=45.75 Aligned_cols=37 Identities=24% Similarity=0.273 Sum_probs=29.1
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC---CccceeEEEcCCCC
Q 008343 166 HVRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTMPDS 202 (569)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~P~~ 202 (569)
.++|++|+|+|.|.|||...+.. .+|+...++|.+..
T Consensus 65 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 104 (109)
T 1x5x_A 65 AYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPDS 104 (109)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCCCcCCccCEEeEeCCCC
Confidence 45789999999999999765533 46778889998754
No 57
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.91 E-value=0.024 Score=47.05 Aligned_cols=39 Identities=33% Similarity=0.697 Sum_probs=30.4
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDSS 203 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~g 203 (569)
..+.|+||+|+|.|.+||...+. +.+|+...|+|.+...
T Consensus 63 ~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~ 104 (108)
T 2djs_A 63 NTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTDSG 104 (108)
T ss_dssp SEEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCCSSC
T ss_pred cEEEEcCCCCCCEEEEEEEEEeCCEECCCCCCEEEEeCCCCc
Confidence 35678999999999999966442 2578889999987643
No 58
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=95.91 E-value=0.053 Score=44.98 Aligned_cols=89 Identities=17% Similarity=0.235 Sum_probs=54.2
Q ss_pred CCCeEEEEec-CCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008343 85 EPEQISVSLS-SAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (569)
Q Consensus 85 ~P~qi~ls~~-~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~ 163 (569)
.|..+.+... .+.+++.|+|.-.....|. ...=.|+|....+..+..... ..
T Consensus 10 ~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~--------i~~Y~v~~~~~~~~~~~~~~~------------------~~- 62 (108)
T 2dm4_A 10 APRNLQLSLPREAEGVIVGHWAPPIHTHGL--------IREYIVEYSRSGSKMWASQRA------------------AS- 62 (108)
T ss_dssp SCEEEEEECCTTCSSCEEEEEECCSCCSSC--------EEEEEEEEEETTCSCCEEEEE------------------SS-
T ss_pred CCcCeEEEEeccCCCEEEEEEcCCCCCCCc--------EEEEEEEEEECCCCCeEEecC------------------Cc-
Confidence 5788877654 3568999999864311110 011245565544432222100 01
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCC
Q 008343 164 IHHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPD 201 (569)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~ 201 (569)
..+.|++|+|+|.|.+||...+. ..+|+...++|.+.
T Consensus 63 -~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 102 (108)
T 2dm4_A 63 -NFTEIKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITTIKG 102 (108)
T ss_dssp -SEEEECSCCSSCEEEEEEEEEESSCEEEECCCEEEECCSC
T ss_pred -cEEEeCCCCCCCEEEEEEEEECCCceeCCCCCEEEECCCC
Confidence 25689999999999999965442 25788889999653
No 59
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.84 E-value=0.01 Score=48.79 Aligned_cols=35 Identities=40% Similarity=0.510 Sum_probs=27.0
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCC
Q 008343 166 HVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMP 200 (569)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P 200 (569)
.+.|+||+|+|.|.+||...+. +.+|+...|+|.|
T Consensus 65 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 65 RFTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp CCEECSCCTTCCEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred eEEEcCCCCCCEEEEEEEEECCCCCCCCCCCEEEEecc
Confidence 3478999999999999965432 3577778888875
No 60
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=95.80 E-value=0.037 Score=59.07 Aligned_cols=180 Identities=16% Similarity=0.232 Sum_probs=95.0
Q ss_pred CeEEEEEcccCCCCCh-H--HH----HHHHH-----------hCCCCEEEEcCCcccccccccCCCCCccccccCCCCCC
Q 008343 208 PSRIAIVGDVGLTYNT-T--ST----VSHMI-----------SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPI 269 (569)
Q Consensus 208 ~~rfavigD~g~~~~~-~--~~----~~~l~-----------~~~pDfvl~~GDl~Y~d~~~~~G~~~~~~~~~~~~~~~ 269 (569)
+.++++++|+|.+... . .. ++.|. ..+...+|++||.+.... ... +..+
T Consensus 200 ~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~-----~~~--------e~~~ 266 (476)
T 3e0j_A 200 DRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHST-----QSR--------DSIN 266 (476)
T ss_dssp CCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC----------------------
T ss_pred CCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCcccccc-----ccc--------hhhh
Confidence 5699999999998752 2 11 22232 236789999999995421 100 0001
Q ss_pred ccch---------hHHHHHHHHhhhhhhccCCcEEecCCccccccccc-----h-hh---HHhhhccCCCCCCCCCCCce
Q 008343 270 HETY---------QPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAEN-----R-TF---VAYTSRFAFPSKESGSLSKF 331 (569)
Q Consensus 270 ~e~Y---------~~~wd~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~-----~-~~---~~y~~~f~~P~~~~~~~~~~ 331 (569)
...| ....+.+..++..+...+|+.++|||||-....-. + -| ..| ..+. ...|
T Consensus 267 ~~~y~~~~~~~~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~~lPQqplh~~lfp~s~~~-~~~~-------~vtN- 337 (476)
T 3e0j_A 267 KAKYLTKKTQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAY-STLQ-------LVTN- 337 (476)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHTTSCEEEECCTTSSSCSSSSCCCCCTTSCHHHHTS-TTEE-------ECCS-
T ss_pred hhhccccccchhhHHHHHHHHHHHHhcccCceEEecCCCCCcccccCCCCCcCHHHhhhhhhc-CccE-------EeCC-
Confidence 1111 12344555677778889999999999998643111 0 01 111 0111 1122
Q ss_pred eEEEEeCcEEEEEEeccc-----cCCCCHHHHHHHHHHHhccccCCCCEEEEEeCCCccccCcccccchHHHHHHHHHHH
Q 008343 332 YYSFNAGGIHFLMLAAYV-----SFDKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLL 406 (569)
Q Consensus 332 yYsf~~G~v~fI~LDt~~-----~~~~~~~Q~~WL~~~L~~~~~~~~~wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll 406 (569)
-|.|++++++|++..... .+.....-++.|++.|+-- .-+ |.+...-..+.. ..-.+++
T Consensus 338 P~~~~i~G~~~LgtsGqnidDi~ky~~~~~~l~~me~~Lkwr--HlA---------PTaPdTl~~yP~-----~~~DpfV 401 (476)
T 3e0j_A 338 PYQATIDGVRFLGTSGQNVSDIFRYSSMEDHLEILEWTLRVR--HIS---------PTAPDTLGCYPF-----YKTDPFI 401 (476)
T ss_dssp SEEEEETTEEEEECSSHHHHHHHHHSCCCCHHHHHHHHHHBT--CSC---------TTSCCC-----------CCSCTTS
T ss_pred CeEEEECCEEEEEECCCCHHHHHhcCCCCCHHHHHHHHHHHh--ccC---------CCCCCceeeccC-----CCCCcee
Confidence 255999999999876531 1223345567888888762 111 211110000000 0000122
Q ss_pred HHcCCcEEEEccccCccee
Q 008343 407 YKYGVDVVFNGHVHAYERS 425 (569)
Q Consensus 407 ~~~~VdlvlsGH~H~yeR~ 425 (569)
-+.-.+++++||.|.|+-.
T Consensus 402 i~~~PhVyf~Gnq~~f~t~ 420 (476)
T 3e0j_A 402 FPECPHVYFCGNTPSFGSK 420 (476)
T ss_dssp CSSCCSEEEEEEESSCEEE
T ss_pred ecCCCcEEEeCCCCcccee
Confidence 2345789999999998775
No 61
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.79 E-value=0.073 Score=43.86 Aligned_cols=89 Identities=16% Similarity=0.088 Sum_probs=53.9
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCeE
Q 008343 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (569)
Q Consensus 85 ~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~~ 164 (569)
.|.++.+... ..+++.|+|.......| . ...=.|+|............. . .
T Consensus 10 ~P~~l~~~~~-~~~si~l~W~~p~~~~g-~-------i~~Y~v~~~~~~~~~~~~~~~-----------~---------~ 60 (106)
T 2ed8_A 10 PVENLQAVST-SPTSILITWEPPAYANG-P-------VQGYRLFCTEVSTGKEQNIEV-----------D---------G 60 (106)
T ss_dssp CCEEEEEECS-STTEEEEEEECCSSCSS-C-------CCEEEEEEEETTTCCEEEEEE-----------C---------S
T ss_pred CCceeEEEec-CCCEEEEEECCCCCCCC-C-------eeEEEEEEEECCCCceEEEeC-----------C---------c
Confidence 5777776543 36899999986532111 0 112356675544332211100 0 1
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---CccceeEEEcCCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTMPDS 202 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~P~~ 202 (569)
..+.|++|+|+|.|.+||...+.. .+|+...|+|....
T Consensus 61 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 101 (106)
T 2ed8_A 61 LSYKLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSDS 101 (106)
T ss_dssp SCEEEESCCTTCEEEEEEEEECSSCEEEECCCEEEECCCCC
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCccCCCcCCEEEEcCCCC
Confidence 245789999999999999765432 56788899997654
No 62
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.76 E-value=0.049 Score=45.62 Aligned_cols=89 Identities=17% Similarity=0.188 Sum_probs=53.2
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCeE
Q 008343 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (569)
Q Consensus 85 ~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~~ 164 (569)
.|..+++... +.+++.|+|.......|. ...=.|+|..........+.. ..
T Consensus 20 ~P~~l~~~~~-~~~si~l~W~~p~~~~~~--------i~~Y~v~~~~~~~~~~~~~~~--------------------~~ 70 (116)
T 1x5g_A 20 PAPNLRAYAA-SPTSITVTWETPVSGNGE--------IQNYKLYYMEKGTDKEQDVDV--------------------SS 70 (116)
T ss_dssp CCSSCEEEEE-ETTEEEEECCCCSCCSSC--------CSEEEEEEEETTCCCCCCEEE--------------------CS
T ss_pred CCCccEEEec-CCCEEEEEEeCCCCCCCc--------ccEEEEEEEECCCCccEEEec--------------------CC
Confidence 5667766433 367999999764321110 112356665544322211110 01
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~ 202 (569)
..+.|+||+|+|.|.+||...+. +.+|+...|+|.+..
T Consensus 71 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 111 (116)
T 1x5g_A 71 HSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSDS 111 (116)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECCCSS
T ss_pred ceEEEcCCCCCCEEEEEEEEEcCCCcCCCCCCEEEECCCCC
Confidence 35678999999999999965432 357888899998654
No 63
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.69 E-value=0.038 Score=46.08 Aligned_cols=39 Identities=26% Similarity=0.198 Sum_probs=31.1
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCCCC
Q 008343 166 HVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDSSS 204 (569)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~g~ 204 (569)
.+.|+||+|+|.|.+||...+. +.+|+...|+|.+...+
T Consensus 65 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~p 106 (109)
T 2e7h_A 65 RAELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQLDSGP 106 (109)
T ss_dssp EEEEESCCTTSCEEEEEEEECSSCBCCCCSCEECCCCCCSSC
T ss_pred EEEECCCCCCCeEEEEEEEEeCCccCCCCCCEEEEcCCCCCC
Confidence 5688999999999999966442 36888899999876543
No 64
>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.61 E-value=0.075 Score=44.87 Aligned_cols=90 Identities=17% Similarity=0.100 Sum_probs=52.1
Q ss_pred CCCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccC
Q 008343 83 GFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (569)
Q Consensus 83 ~~~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~ 162 (569)
...|..+.++-- +.+++.|+|.-.... ...=.|+|....+....... + .+
T Consensus 8 ~~pP~~l~~~~v-t~tsi~vsW~pp~~~-----------i~~Y~I~y~~~~~~~~~~~~----v--------------~~ 57 (108)
T 2ee3_A 8 LAPPRHLGFSDV-SHDAARVFWEGAPRP-----------VRLVRVTYVSSEGGHSGQTE----A--------------PG 57 (108)
T ss_dssp CCCSSCEEEESC-CSSCEEEEESCCSSC-----------CSEEEEEEEETTTCCBCCEE----E--------------ET
T ss_pred CCCCceEEEEEc-cCCeEEEEeeCCCCC-----------ccEEEEEEEeCCCCceeEEE----c--------------CC
Confidence 345788877533 468999999753211 12236777655432211100 0 01
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCCCCccc--eeEEEcCCCC
Q 008343 163 IIHHVRLTGLKPDTLYHYQCGDPSIPAMSG--TYCFRTMPDS 202 (569)
Q Consensus 163 ~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~P~~ 202 (569)
-...+.|+||+|+|.|..+|..-+..+.|. ...|+|.+.+
T Consensus 58 ~~t~~~l~~L~p~T~Y~v~V~A~~~~g~s~p~~~~~~T~~vP 99 (108)
T 2ee3_A 58 NATSAMLGPLSSSTTYTVRVTCLYPGGGSSTLTGRVTTKKAP 99 (108)
T ss_dssp TCCEEEECSCCSSCEEEEEEEEECTTSCEEEEEEEEECCCCC
T ss_pred CcCEEEcCCCCCCCEEEEEEEEEeCCCcCCCccCEEEeCCCC
Confidence 123578999999999999996654334333 3468887433
No 65
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.60 E-value=0.098 Score=44.14 Aligned_cols=39 Identities=28% Similarity=0.210 Sum_probs=30.6
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDSS 203 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~g 203 (569)
..+.|+||+|+|.|.+||...+. +.+|+...|+|.+.+.
T Consensus 74 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 115 (119)
T 2ee2_A 74 YSARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKASG 115 (119)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEECCCCCC
T ss_pred eEEEECCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCCCCC
Confidence 36689999999999999965432 3678888999986654
No 66
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.50 E-value=0.076 Score=44.28 Aligned_cols=38 Identities=37% Similarity=0.524 Sum_probs=29.9
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---CccceeEEEcCCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTMPDS 202 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~P~~ 202 (569)
..+.|+||+|+|.|.+||...+.. .+|+...|+|.+..
T Consensus 70 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 110 (115)
T 1x5z_A 70 TSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSS 110 (115)
T ss_dssp SEEEEECCCTTCEEEECEEEECSSCEEEECCCEEEECCCCC
T ss_pred cEEEECCCCCCCeEEEEEEEECCCcccCCCcCEEEecCCCC
Confidence 356789999999999999765432 57788899998764
No 67
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.50 E-value=0.13 Score=43.14 Aligned_cols=94 Identities=19% Similarity=0.223 Sum_probs=54.2
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008343 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (569)
Q Consensus 84 ~~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~ 163 (569)
..|..+.+... +.+++.|+|.-.....| . ...=.|+|........... .. ...-
T Consensus 19 ~~P~~l~~~~~-~~~sv~l~W~~p~~~~~-~-------i~~Y~v~~~~~~~~~~~~~-------~~----------~~~~ 72 (119)
T 2ed7_A 19 SAPRDVVPVLV-SSRFVRLSWRPPAEAKG-N-------IQTFTVFFSREGDNRERAL-------NT----------TQPG 72 (119)
T ss_dssp CCCSCCEEEEE-CSSCEEEECCCCSCCSS-C-------EEEEEEEEEESSCCCCEEE-------EC----------CCTT
T ss_pred cCCcceEEEec-CCCEEEEEEeCCCCCCC-c-------EEEEEEEEEeCCCCcceee-------Ee----------ecCC
Confidence 35777766643 36899999975331100 0 0112455554433222111 00 0011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC---CCCccceeEEEcCCCCC
Q 008343 164 IHHVRLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRTMPDSS 203 (569)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~P~~g 203 (569)
...+.|++|+|+|.|.+||...+ ...+|+...++|.+...
T Consensus 73 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 115 (119)
T 2ed7_A 73 SLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPESG 115 (119)
T ss_dssp CCEEEECSCCSSSEEEECCEEEESSCBCSCCCCEEEECCCCSC
T ss_pred ceEEEeCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCCCC
Confidence 24578999999999999985533 23678888999987543
No 68
>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}
Probab=95.45 E-value=0.068 Score=43.53 Aligned_cols=88 Identities=17% Similarity=0.151 Sum_probs=51.6
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCeE
Q 008343 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (569)
Q Consensus 85 ~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~~ 164 (569)
.|.++.+.-.. .+++.|+|...... ...=.|+|....+...... ... ..-.
T Consensus 4 ~P~~l~v~~~~-~~sv~l~W~~p~~~-----------i~~Y~v~y~~~~~~~~~~~----~~~-------------~~~~ 54 (98)
T 3teu_A 4 APTDLQVTNVT-DTSITVSWTPPSAT-----------ITGYRITYTPSNGPGEPKE----LTV-------------PPSS 54 (98)
T ss_dssp CCEEEEEEEEC-SSCEEEEEECCSSC-----------CSEEEEEEEETTSCSCCEE----EEE-------------CTTC
T ss_pred CCCceEEEEec-CCEEEEEEeCCCCc-----------ccEEEEEEEECCCCCceEE----EEc-------------CCCc
Confidence 47777665433 68999999864211 1123577764332211110 000 0112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCccceeEEEcCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSIPAMSGTYCFRTMPD 201 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~P~ 201 (569)
..++|+||+|+|.|.+||...+..+.|+...+.+++.
T Consensus 55 ~~~~i~~L~p~t~Y~~~V~A~n~~G~s~p~~~~~~~~ 91 (98)
T 3teu_A 55 TSVTITGLTPGVEYVVSVYALKDNQESPPLVGTQTTG 91 (98)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECS
T ss_pred CEEEecCCCCCCEEEEEEEEEeCCCCCCCeEEEeccC
Confidence 3578999999999999997766556666666655543
No 69
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.40 E-value=0.13 Score=44.00 Aligned_cols=38 Identities=24% Similarity=0.095 Sum_probs=29.6
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~ 202 (569)
..++|+||+|+|.|.+||...+. +.+|....|+|.+..
T Consensus 79 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 119 (134)
T 2edx_A 79 SSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDV 119 (134)
T ss_dssp SEEEEESCCTTCEEEEEEEEEETTBCCCCCCCEEEECCCCS
T ss_pred cEEEeCCCCCCCEEEEEEEEEcCCCcCCCCCCEEeecCCCC
Confidence 46788999999999999965332 367888889997654
No 70
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=95.38 E-value=0.16 Score=41.66 Aligned_cols=80 Identities=18% Similarity=0.245 Sum_probs=46.8
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCeE
Q 008343 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (569)
Q Consensus 85 ~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~~ 164 (569)
.|.++.+.- -+.+++.|+|.-.... ...=.|+|........... .. ..+-.
T Consensus 4 ~P~~l~~~~-~~~~sv~lsW~pP~~~-----------i~~Y~v~y~~~~~~~~~~~----~~-------------~~~~~ 54 (100)
T 3b83_A 4 PPFNIKVTN-ITLTTAVVTWQPPILP-----------IEGILVTFGRKNDPSDETT----VD-------------LTSSI 54 (100)
T ss_dssp CCEEEEEES-CCSSCEEEEEECCSSC-----------CSEEEEEEEESSCTTTCEE----EE-------------ECTTE
T ss_pred cCCccEEEE-ecCCEEEEEEcCCccc-----------CCEEEEEEEECCCCCCceE----EE-------------ECCcc
Confidence 477777654 3478999999753210 1123577765432211110 00 01123
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCccce
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSIPAMSGT 193 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~ 193 (569)
-.++|+||+|+|.|.+||...+..+.|+.
T Consensus 55 t~~~i~~L~p~t~Y~~~V~A~n~~g~s~p 83 (100)
T 3b83_A 55 TSLTLTNLEPNTTYEIRIVARNGQQYSPP 83 (100)
T ss_dssp EEEEECSCCTTCEEEEEEEEEETTEECCC
T ss_pred eEEEECCCCCCCEEEEEEEEEeCCCCCCC
Confidence 56789999999999999977654455543
No 71
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.32 E-value=0.065 Score=43.89 Aligned_cols=37 Identities=22% Similarity=0.170 Sum_probs=28.9
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008343 166 HVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (569)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~ 202 (569)
.+.|++|+|+|.|.|||...+. ..+|+...++|.+..
T Consensus 62 ~~~i~~L~p~t~Y~~~V~A~n~~G~~~~S~~~~~~T~~~~ 101 (106)
T 2dju_A 62 RYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQS 101 (106)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSCBCCCCCCEEEECCCSS
T ss_pred EEEEeCCCCCcEEEEEEEEEeCCccCCCcccEEeEcCCCC
Confidence 4578999999999999975442 257788889998754
No 72
>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.32 E-value=0.065 Score=45.65 Aligned_cols=89 Identities=21% Similarity=0.228 Sum_probs=52.1
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCC---------CceEEEeEEEEeeeecccC
Q 008343 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQ---------LNRKATGRSLVYSQLYPFL 154 (569)
Q Consensus 84 ~~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~---------~~~~~~g~~~~y~~~~p~~ 154 (569)
..|.+++++-- +.+++.|+|...... ...=.|+|....+. ..... . .
T Consensus 10 p~p~~L~v~~~-T~~Si~LsW~~p~g~-----------v~~Y~i~y~~~~~~~~e~~~~~~~~~~~-----~----v--- 65 (112)
T 2cui_A 10 PRLSQLSVTDV-TTSSLRLNWEAPPGA-----------FDSFLLRFGVPSPSTLEPHPRPLLQREL-----M----V--- 65 (112)
T ss_dssp CCCCCCEEESC-CSSCEEEECCCCTTS-----------CSEEEEEEECCCCSSSCCCSSCCCCEEE-----E----E---
T ss_pred CCCCceEEEee-cCCeEEEEECCCCCC-----------ccEEEEEEEeCCCCccccccccCcceEE-----E----c---
Confidence 45777777643 368999999753211 11346778755432 01110 0 0
Q ss_pred CccccccCeEEEEEeCCCCCCCEEEEEEecCCCCCcc--ceeEEEcCCCC
Q 008343 155 GLQNYTSGIIHHVRLTGLKPDTLYHYQCGDPSIPAMS--GTYCFRTMPDS 202 (569)
Q Consensus 155 g~~~~~~~~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S--~~~~F~T~P~~ 202 (569)
++-.-.++|+||+|+|.|..+|........| -....+|.+.+
T Consensus 66 ------~~~~t~~~l~gL~PgT~Y~~~V~A~~~~~~s~p~~~~~~T~~~~ 109 (112)
T 2cui_A 66 ------PGTRHSAVLRDLRSGTLYSLTLYGLRGPHKADSIQGTARTLSGP 109 (112)
T ss_dssp ------ETTCCEEEECSCCTTCEEEEEEEEECSSSEEEEEEEEEECCCCS
T ss_pred ------CCCcCEEEeCCCCCCCEEEEEEEEEECCcccCCEEEEEEECCCC
Confidence 0112367899999999999999765433444 34566776644
No 73
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=95.31 E-value=0.011 Score=59.90 Aligned_cols=38 Identities=16% Similarity=0.176 Sum_probs=24.4
Q ss_pred eEEEEEcccCCCCCh-HHHHHHHHhCCCCEEEEcCCccc
Q 008343 209 SRIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTY 246 (569)
Q Consensus 209 ~rfavigD~g~~~~~-~~~~~~l~~~~pDfvl~~GDl~Y 246 (569)
.+++++||+|..... .+.++.+.....+.+|++||+++
T Consensus 50 ~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~VD 88 (309)
T 2ie4_C 50 CPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVD 88 (309)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHHCCTTTSCEEECSCCSS
T ss_pred CCEEEEecCCCCHHHHHHHHHHcCCCCCCEEEEeCCccC
Confidence 479999999965321 12223222234577899999995
No 74
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.23 E-value=0.11 Score=44.10 Aligned_cols=90 Identities=17% Similarity=0.179 Sum_probs=52.0
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCeE
Q 008343 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (569)
Q Consensus 85 ~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~~ 164 (569)
.|..+.+... +++++.|+|.-....... ++ ...=.|+|....+...... . .+..
T Consensus 31 ~P~~l~~~~~-~~~sv~l~W~~p~~~~~~-----g~-i~~Y~v~~~~~~~~~~~~~------~-------------~~~~ 84 (124)
T 2ed9_A 31 PPQNVSLEVV-NSRSIKVSWLPPPSGTQN-----GF-ITGYKIRHRKTTRRGEMET------L-------------EPNN 84 (124)
T ss_dssp CCBSCCEEEE-ETTEEEEECBCCCTTTCC-----SC-CCEEEEEEEESSSSCCEEE------E-------------CSSC
T ss_pred CCeeeEEEEc-CCCEEEEEEECcCCcCCC-----cE-EeEEEEEEEECCCCcceEE------e-------------cCCc
Confidence 4666655433 367999999764321000 00 1123566665443322110 0 0112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMP 200 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P 200 (569)
..+.|++|+|+|.|.+||...+. +.+|+...|+|..
T Consensus 85 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 85 LWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp SEEEEECCCSSCEEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred CEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 35678999999999999965432 3578888898864
No 75
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=95.14 E-value=0.068 Score=45.77 Aligned_cols=83 Identities=20% Similarity=0.237 Sum_probs=48.5
Q ss_pred CCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCeEEEEEeCCCCC
Q 008343 95 SAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGIIHHVRLTGLKP 174 (569)
Q Consensus 95 ~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~~h~v~l~gL~P 174 (569)
.+.+++.|+|.-.. .|. .|. ..=.|+|.......+..+.. .+ + ....++|.||+|
T Consensus 19 ~~~~sv~L~W~p~~--dgg--sPI----~~Y~I~yr~~~~~~w~~~~~--------~~--~-------~~~~~~l~~L~p 73 (114)
T 2kbg_A 19 SSGKSFKLSITKQD--DGG--API----LEYIVKYRSKDKEDQWLEKK--------VQ--G-------NKDHIILEHLQW 73 (114)
T ss_dssp CSTTCEEEEECCCC--CSS--SCC----SEEEEEEEESSCCSCCEEEE--------EE--T-------TTCCEEECCCCT
T ss_pred cCCCEEEEEEECCC--CCC--Ccc----cEEEEEEEeCCCCCcEEeEE--------cC--C-------CcCEEEEcCCCC
Confidence 45789999997432 111 111 22478887764433322111 01 1 112467999999
Q ss_pred CCEEEEEEecCCCCCccc--eeEEEcCCCC
Q 008343 175 DTLYHYQCGDPSIPAMSG--TYCFRTMPDS 202 (569)
Q Consensus 175 ~T~Y~Yrvg~~~~~~~S~--~~~F~T~P~~ 202 (569)
++.|.+||...+..+.|+ ...|+|.+.+
T Consensus 74 ~t~Y~frV~A~N~~G~s~pS~~~~~T~~~~ 103 (114)
T 2kbg_A 74 TMGYEVQITAANRLGYSEPTVYEFSMPPKP 103 (114)
T ss_dssp TCCEEEEEEEECTTSCEEEEEEEECCCCCC
T ss_pred CCEEEEEEEEEeCCcCcCCcCCEEEcCCCC
Confidence 999999998755434433 4678886554
No 76
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.10 E-value=0.031 Score=47.38 Aligned_cols=37 Identities=22% Similarity=0.122 Sum_probs=28.1
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008343 166 HVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (569)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~ 202 (569)
..+|++|+|+|.|.|||...+. ..+|+...++|.+.+
T Consensus 76 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 115 (120)
T 2crm_A 76 EHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPAVS 115 (120)
T ss_dssp EEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCCCCS
T ss_pred EEEECCCCCCCEEEEEEEEEcCCccCCCcccEEEEcCCCC
Confidence 4578999999999999976442 256777778887543
No 77
>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.10 E-value=0.084 Score=43.77 Aligned_cols=38 Identities=26% Similarity=0.231 Sum_probs=27.2
Q ss_pred EEEeCCCCCCCEEEEEEecCCCCCccc--eeEEEcCCCCC
Q 008343 166 HVRLTGLKPDTLYHYQCGDPSIPAMSG--TYCFRTMPDSS 203 (569)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~P~~g 203 (569)
.+.|+||+|+|.|.++|...+....|. ...++|.|...
T Consensus 62 ~~~l~~L~p~t~Y~~~V~A~~~~~~s~p~~~~~~T~p~~~ 101 (104)
T 2dkm_A 62 EVLLDGLEPGRDYEVSVQSLRGPEGSEARGIRARTPTSGP 101 (104)
T ss_dssp EEEEESCCTTCCEEEEEEEECSSSBCCCEEEECCCCCCSC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCEEEEEEcCCCCC
Confidence 678999999999999997654334443 34566766543
No 78
>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A
Probab=95.07 E-value=0.11 Score=43.09 Aligned_cols=89 Identities=18% Similarity=0.179 Sum_probs=48.7
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCC-CceEEEeEEEEeeeecccCCccccccCe
Q 008343 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQ-LNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (569)
Q Consensus 85 ~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~-~~~~~~g~~~~y~~~~p~~g~~~~~~~~ 163 (569)
.|.++.+.- -+.+++.|+|.-.. |. ...=.|+|...... ...... . .+-
T Consensus 5 ~P~~l~v~~-~t~~sv~lsW~~p~---~~--------i~~Y~v~y~~~~~~~~~~~~~---------v---------~~~ 54 (104)
T 2rb8_A 5 APSQIEVKD-VTDTTALITWMPPS---QP--------VDGFELTYGIKDVPGDRTTID---------L---------TED 54 (104)
T ss_dssp CCEEEEEES-CCSSCEEEEEECCS---SC--------CSEEEEEEEETTCTTCCEEEE---------E---------ETT
T ss_pred CCCccEEEE-ecCCeEEEEEcCCC---Cc--------cceEEEEEEECcCCCceEEEE---------c---------CCC
Confidence 477777654 34689999997532 10 01235677543211 111110 0 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCc--cceeEEEcCCCCC
Q 008343 164 IHHVRLTGLKPDTLYHYQCGDPSIPAM--SGTYCFRTMPDSS 203 (569)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~--S~~~~F~T~P~~g 203 (569)
...+.|+||+|+|.|.++|...+..+. .....|+|.+...
T Consensus 55 ~~~~~l~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~~~~~ 96 (104)
T 2rb8_A 55 ENQYSIGNLKPDTEYEVSLISRRGDMSSNPAKETFTTGLAAA 96 (104)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCC---
T ss_pred cCEEEeCCCCCCCEEEEEEEEEeCCccCCCEEEEEECCCCcc
Confidence 235689999999999999965432222 2346688876644
No 79
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.06 E-value=0.17 Score=43.22 Aligned_cols=94 Identities=17% Similarity=0.181 Sum_probs=54.0
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCeE
Q 008343 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (569)
Q Consensus 85 ~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~~ 164 (569)
.|..+.+... +.+++.|+|.......|. ...=.|+|........... ... .....
T Consensus 30 ~P~~l~~~~~-~~~sv~l~W~~p~~~~g~--------i~~Y~v~~~~~~~~~~~~~---~~~-------------~~~~~ 84 (130)
T 1wfo_A 30 PPMGILFPEV-RTTSVRLIWQPPAAPNGI--------ILAYQITHRLNTTTANTAT---VEV-------------LAPSA 84 (130)
T ss_dssp CCCCCEEEEE-CSSEEEEECCCCSCCCSC--------CCEEEEEEEESSCCCSCCC---EEE-------------ECTTC
T ss_pred CCCceEEEec-CCCEEEEEEcCCCCCCCc--------eEEEEEEEEECCCCCceEE---EEE-------------eCCCc
Confidence 5777766544 368999999764321110 0123566655432111000 000 01123
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---CccceeEEEcCCCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTMPDSS 203 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~P~~g 203 (569)
..+.|++|+|+|.|.+||...+.. .+|....|+|.+...
T Consensus 85 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 126 (130)
T 1wfo_A 85 RQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRSG 126 (130)
T ss_dssp CEEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSSCCC
T ss_pred eEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEecCCCCC
Confidence 467889999999999999765533 467777899976543
No 80
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.98 E-value=0.25 Score=42.02 Aligned_cols=38 Identities=8% Similarity=0.019 Sum_probs=30.0
Q ss_pred EEEeCCCCCCCEEEEEEecCC---CCCccceeEEEcCCCCC
Q 008343 166 HVRLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRTMPDSS 203 (569)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~P~~g 203 (569)
.++|++|+|+|.|.+||...+ .+.+|+...|+|.+...
T Consensus 80 ~~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~~~ 120 (124)
T 2dbj_A 80 RARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAHSG 120 (124)
T ss_dssp CEEEECCCSSSEEEECEEEEESSCBCCCCCCEEEECCCSCC
T ss_pred eEEecCCCCCCEEEEEEEEECCCccCCCCCCEEEEcCCCCC
Confidence 567899999999999996543 23688999999987543
No 81
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=94.91 E-value=0.24 Score=45.86 Aligned_cols=38 Identities=29% Similarity=0.201 Sum_probs=28.9
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~ 202 (569)
..+.|++|+|+|.|.+||...+. ..+|....++|.+..
T Consensus 64 ~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~~~ 104 (211)
T 3p4l_A 64 LSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELV 104 (211)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCCC
T ss_pred eEEEecCcCCCCEEEEEEEEEcCCCCCccceeEeeecccCC
Confidence 35678999999999999965432 256778899997643
No 82
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.85 E-value=0.055 Score=45.42 Aligned_cols=38 Identities=18% Similarity=0.203 Sum_probs=29.7
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCCC
Q 008343 166 HVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDSS 203 (569)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~g 203 (569)
..+|+||+|+|.|.|||...+. ..+|+...++|.+.+.
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p~ 106 (110)
T 2db8_A 66 MCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEGSG 106 (110)
T ss_dssp CEEEECCCSSSCCEEEEEEECSSCBCCCCSCEECCCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCcCCCCCCCEEEEcCCCCC
Confidence 3567899999999999966543 2578888999987654
No 83
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=94.83 E-value=0.2 Score=45.41 Aligned_cols=76 Identities=12% Similarity=0.149 Sum_probs=44.4
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCeE
Q 008343 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (569)
Q Consensus 85 ~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~~ 164 (569)
.|..+.+.-. ..+++.|+|.......|.. ...=.|+|............-.. ..
T Consensus 8 ~P~~l~~~~~-~~~sv~l~W~~p~~~~~~~-------i~~Y~v~~~~~~~~~~~~~~~~~------------------~~ 61 (197)
T 3lpw_A 8 PPQDLKVKEV-TKTSVTLTWDPPLLDGGSK-------IKNYIVEKRESTRKAYSTVATNC------------------HK 61 (197)
T ss_dssp CCEEEEEEEE-CSSCEEEEEECCSCCTTSC-------CCEEEEEEEETTCSSCEEEEEEE------------------CS
T ss_pred CCCCcEEEEe-cCCEEEEEEcCCccCCCCc-------ccEEEEEEEECCCCccEEeecCC------------------Cc
Confidence 5777766533 3689999998753211110 11235677665543332221110 11
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPS 186 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~ 186 (569)
..+.+++|+|+|.|.|||...+
T Consensus 62 ~~~~~~~L~p~t~Y~~~V~a~~ 83 (197)
T 3lpw_A 62 TSWKVDQLQEGCSYYFRVLAEN 83 (197)
T ss_dssp SEEEECCCCTTCEEEEEEEEEE
T ss_pred cEEEEcCCCCCCEEEEEEEEEc
Confidence 3567899999999999997554
No 84
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=94.82 E-value=0.15 Score=47.27 Aligned_cols=95 Identities=18% Similarity=0.180 Sum_probs=54.4
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008343 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (569)
Q Consensus 84 ~~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~ 163 (569)
..|..+.+..... ++.|+|.-.....|..+ ..=.|+|.......+.... +... ..+.
T Consensus 10 ~~P~~~~~~~~~~--s~~l~W~~p~~~~g~~i-------~~Y~v~~~~~~~~~~~~~~-----~~~~---------~~~~ 66 (209)
T 2vkw_A 10 SSPSIDQVEPYSS--TAQVQFDEPEATGGVPI-------LKYKAEWRAVGEEVWHSKW-----YDAK---------EASM 66 (209)
T ss_dssp CCCEEEEEEECSS--CEEEEEECCSCCCSSCC-------CEEEEEEEESSCCCCEEEE-----EEHH---------HHHH
T ss_pred cCCcccEeeeccC--eEEEEEcCCCcCCCcce-------eEEEEEEeeCCCCCceEeE-----eecc---------CCCc
Confidence 3488887765543 68999987432112111 2235677655433332211 0000 0011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCC
Q 008343 164 IHHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPD 201 (569)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~ 201 (569)
....+|++|+|+|.|.|||...+. ..+|....|+|.+.
T Consensus 67 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~T~~~ 107 (209)
T 2vkw_A 67 EGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 107 (209)
T ss_dssp HSEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECCCS
T ss_pred cceEEeCCCCCCCeEEEEEEEEcCCcccCCcccccccccCC
Confidence 235678999999999999965432 25677778998765
No 85
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.78 E-value=0.16 Score=42.67 Aligned_cols=95 Identities=17% Similarity=0.159 Sum_probs=55.2
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcc--cccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccc-ccc
Q 008343 85 EPEQISVSLSSAHDSVWISWITGEF--QIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQN-YTS 161 (569)
Q Consensus 85 ~P~qi~ls~~~~p~s~~I~W~T~~~--~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~-~~~ 161 (569)
.|..+.+... +.+++.|+|..... ..|. ...=.|+|.......... +. ... ...
T Consensus 18 ~P~~~~~~~~-~~~sv~l~W~~p~~~~~~g~--------i~~Y~v~~~~~~~~~~~~-------~~-------~~~~~~~ 74 (122)
T 1va9_A 18 PPMDVTLQPV-TSQSIQVTWKAPKKELQNGV--------IRGYQIGYRENSPGSNGQ-------YS-------IVEMKAT 74 (122)
T ss_dssp CCEEEEEEEC-SSSEEEEEEECCCSSTTCSC--------CCEEEEEEEESSTTSCCS-------CB-------CCBCCCC
T ss_pred CCcceEEEec-cCCEEEEEEeCCCCcCCCCc--------EeEEEEEEEECCCCCCcc-------eE-------EEEEecC
Confidence 4777776443 46899999987542 1110 112346665443221100 00 000 012
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008343 162 GIIHHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (569)
Q Consensus 162 ~~~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~ 202 (569)
+-...+.|+||+|+|.|.+||...+. +.+|+...|+|....
T Consensus 75 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 118 (122)
T 1va9_A 75 GDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLESG 118 (122)
T ss_dssp SSEEEEEEESCCSSCCEEEEEEEEETTEECCCCCCEECCCCSSC
T ss_pred CceeEEEeCCCCCCCEEEEEEEEEcCCCCCCCccCEEEEeCCCC
Confidence 33567889999999999999965432 357888889887653
No 86
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=94.75 E-value=0.02 Score=58.88 Aligned_cols=24 Identities=17% Similarity=0.436 Sum_probs=19.5
Q ss_pred HHHHHHHHHcCCcEEEEccccCcc
Q 008343 400 VAMEDLLYKYGVDVVFNGHVHAYE 423 (569)
Q Consensus 400 ~~l~~ll~~~~VdlvlsGH~H~ye 423 (569)
+.+..++..++.++++.||+|.-+
T Consensus 268 ~~~~~fl~~~~~~~IV~GHt~~~~ 291 (342)
T 2z72_A 268 AELDTILQHFNVNHIVVGHTSQER 291 (342)
T ss_dssp HHHHHHHHHHTCSEEEECSSCCSS
T ss_pred HHHHHHHHHCCCcEEEECCCcccc
Confidence 455677888899999999999754
No 87
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.73 E-value=0.15 Score=42.88 Aligned_cols=37 Identities=16% Similarity=0.174 Sum_probs=28.6
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008343 166 HVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (569)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~ 202 (569)
.++|++|+|+|.|.|||...+. ..+|+...|+|.+..
T Consensus 74 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 113 (118)
T 1x3d_A 74 QFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGCS 113 (118)
T ss_dssp EEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECSCCC
T ss_pred EEEeCCCCCCCEEEEEEEEEECCCCCCCccCEEEEcCCCC
Confidence 4578999999999999965432 357788889987654
No 88
>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1
Probab=94.70 E-value=0.19 Score=39.94 Aligned_cols=33 Identities=24% Similarity=0.398 Sum_probs=22.2
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC----CccceeEEEc
Q 008343 166 HVRLTGLKPDTLYHYQCGDPSIP----AMSGTYCFRT 198 (569)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~~----~~S~~~~F~T 198 (569)
...+++|+|+++|+|||..-+.. ..|....++|
T Consensus 52 ~~~~~~L~~~t~Y~~~V~A~n~~G~~s~~S~~v~v~T 88 (88)
T 1k85_A 52 TATISGLAADTSYTFTVKAKDAAGNVSAASNAVSVKT 88 (88)
T ss_dssp EEEECCCCSSCEEEEEEEEEETTTEECCCCCCEEEEC
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCCCcCCCCCCEEEEC
Confidence 34689999999999999754321 3444555544
No 89
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.70 E-value=0.12 Score=44.61 Aligned_cols=36 Identities=19% Similarity=0.225 Sum_probs=27.5
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC--CccceeEEEcCCC
Q 008343 166 HVRLTGLKPDTLYHYQCGDPSIP--AMSGTYCFRTMPD 201 (569)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~~--~~S~~~~F~T~P~ 201 (569)
..+|+||+|+|.|.|||...+.. ..|+...++|.+.
T Consensus 81 ~~~v~gL~p~t~Y~frV~A~N~~G~~~S~~v~~~T~~~ 118 (127)
T 2dmk_A 81 HYTVHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTNSQ 118 (127)
T ss_dssp EEEEESCCSSCEEEEEEEEEESSCEEECCCEEEECCSS
T ss_pred eEEECCCCCCCEEEEEEEEEeCCCCCCCcCeEeEeCCC
Confidence 34788999999999999655432 4667788888764
No 90
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.69 E-value=0.19 Score=42.96 Aligned_cols=37 Identities=16% Similarity=0.221 Sum_probs=29.6
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPD 201 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~ 201 (569)
..++|++|+|+|.|.+||...+. +.+|+...|+|.+.
T Consensus 77 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 116 (132)
T 1x5h_A 77 LSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFES 116 (132)
T ss_dssp CEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred cEEEeCCCCCCCEEEEEEEEEcCCccCCCCcCEEeEcCcc
Confidence 56788999999999999976543 25788889999774
No 91
>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic}
Probab=94.68 E-value=0.1 Score=42.82 Aligned_cols=79 Identities=24% Similarity=0.267 Sum_probs=45.1
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCC-ceEEEeEEEEeeeecccCCccccccCe
Q 008343 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQL-NRKATGRSLVYSQLYPFLGLQNYTSGI 163 (569)
Q Consensus 85 ~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~-~~~~~g~~~~y~~~~p~~g~~~~~~~~ 163 (569)
.|..+.++- -+.+++.|+|...... ...=.|+|....... .... . .+ +-
T Consensus 4 ~P~~l~v~~-~t~~Sv~lsW~~p~~~-----------i~~Y~v~y~~~~~~~~~~~~-----~----~~---------~~ 53 (98)
T 3tes_A 4 APKNLVVSE-VTEDSLRLSWTAPDAA-----------FDSFMIQYQESEKVGEAINL-----T----VP---------GS 53 (98)
T ss_dssp CCEEEEEES-CCSSCEEEEEECCTTS-----------CSEEEEEEEETTBCSCCEEE-----E----EE---------TT
T ss_pred CCCceEEEe-cCCCeEEEEecCCcCc-----------cceEEEEEEECCCCCceEEE-----E----cC---------CC
Confidence 466776652 3468999999864310 112357776643211 1110 0 00 01
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCccce
Q 008343 164 IHHVRLTGLKPDTLYHYQCGDPSIPAMSGT 193 (569)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~ 193 (569)
.-.++|+||+|+|.|.++|...+..+.|+.
T Consensus 54 ~t~~~l~gL~P~t~Y~~~V~A~~~~g~S~p 83 (98)
T 3tes_A 54 ERSYDLTGLKPGTEYTVSIYGVKGGHRSNP 83 (98)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEETTEEBCC
T ss_pred cCEEEECCCCCCCEEEEEEEEEeCCcccCC
Confidence 135789999999999999976553444443
No 92
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.67 E-value=0.15 Score=43.49 Aligned_cols=38 Identities=18% Similarity=0.273 Sum_probs=27.0
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---Cccce-eEEEcCCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSIP---AMSGT-YCFRTMPDS 202 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~-~~F~T~P~~ 202 (569)
..++|++|+|+|.|.|||...+.. .+|.. ..++|.+..
T Consensus 79 ~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~~ 120 (124)
T 1wis_A 79 RSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSG 120 (124)
T ss_dssp SEEEECSCCTTSEECCCCEEECSSCBCCCCCCCCCEECCCSS
T ss_pred eEEEeCCCCCCCEEEEEEEEEECCccCCCcCCccceEcCCCC
Confidence 356889999999999999765533 34443 457777654
No 93
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}
Probab=94.65 E-value=0.15 Score=43.17 Aligned_cols=81 Identities=10% Similarity=0.079 Sum_probs=45.4
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCeE
Q 008343 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (569)
Q Consensus 85 ~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~~ 164 (569)
.|..+.+.-- ..+++.|+|.-....-|..+ ..=.|+|.......+..+... ...
T Consensus 20 ~P~~l~~~~~-~~~sv~l~W~~p~~~gg~~i-------~~Y~v~~~~~~~~~w~~~~~~------------------~~~ 73 (120)
T 2yux_A 20 PPQIVKIEDV-WGENVALTWTPPKDDGNAAI-------TGYTIQKADKKSMEWFTVIEH------------------YHR 73 (120)
T ss_dssp CCSCEEEEEE-ETTEEEEEECCCSCCCSSCC-------CCCCEEEEETTTCCCEEEESS------------------CCS
T ss_pred cCCCCEEEEe-cCCEEEEEEcCCCcCCCCCc-------eEEEEEEEECCCCceEEeeec------------------CCc
Confidence 4777765432 35799999976432111111 122477765543333222100 011
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCcc
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSIPAMS 191 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S 191 (569)
..++|++|+|++.|.|||...+..+.+
T Consensus 74 ~~~~v~~L~p~t~Y~frV~A~n~~G~s 100 (120)
T 2yux_A 74 TSATITELVIGNEYYFRVFSENMCGLS 100 (120)
T ss_dssp SCCEECCCCSSEEEEEEECCCSSSCSC
T ss_pred CEEEECCCCCCCEEEEEEEEeeCCcCC
Confidence 234789999999999999876644444
No 94
>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.65 E-value=0.26 Score=41.11 Aligned_cols=92 Identities=12% Similarity=-0.004 Sum_probs=53.1
Q ss_pred CCCCeEEEEec-CCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccC
Q 008343 84 FEPEQISVSLS-SAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (569)
Q Consensus 84 ~~P~qi~ls~~-~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~ 162 (569)
..|..+.+... ++++++.|+|.....-.... . ....=.|+|....+.....+.. ..
T Consensus 9 ~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~----~-~~l~Y~v~y~~~~~~~w~~~~~-----------------~~- 65 (109)
T 1uc6_A 9 DPPENVVARPVPSNPRRLEVTWQTPSTWPDPE----S-FPLKFFLRYRPLILDQWQHVEL-----------------SN- 65 (109)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCTT----T-TTBCEEEEEEESSSCCCCCEEE-----------------SS-
T ss_pred CCCcceEEEEcCCCCCEEEEEECCCCCccCCC----c-EEEEEEEEEEECCCCCcEEEec-----------------cc-
Confidence 45888887764 45789999998643200000 0 0123467887765432221100 00
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCC--C---CccceeEEEcC
Q 008343 163 IIHHVRLTGLKPDTLYHYQCGDPSI--P---AMSGTYCFRTM 199 (569)
Q Consensus 163 ~~h~v~l~gL~P~T~Y~Yrvg~~~~--~---~~S~~~~F~T~ 199 (569)
...+.|.+|+|||.|.+||..... + .||+...++|.
T Consensus 66 -~~~~~l~~L~p~t~Y~~~VRa~~~g~g~wS~WS~~~~~~~~ 106 (109)
T 1uc6_A 66 -GTAHTITDAYAGKEYIIQVAAKDNEIGTWSDWSVAAHATPW 106 (109)
T ss_dssp -CSEEEETTCCSSSCEEEEEECCBSSSCCCCCCCEEEEECCC
T ss_pred -CCEEEEeCCCCCCEEEEEEEEEeCCCCCcCcCCCCeeeeec
Confidence 125578999999999999976531 2 45555666543
No 95
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=94.59 E-value=0.02 Score=58.48 Aligned_cols=38 Identities=18% Similarity=0.141 Sum_probs=24.4
Q ss_pred eEEEEEcccCCCCCh-HHHHHHHHhCCCCEEEEcCCccc
Q 008343 209 SRIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTY 246 (569)
Q Consensus 209 ~rfavigD~g~~~~~-~~~~~~l~~~~pDfvl~~GDl~Y 246 (569)
.+++++||+|..... ...++.+.....+-+|++||+++
T Consensus 57 ~~i~viGDIHG~~~~L~~ll~~~g~~~~~~~vflGD~VD 95 (330)
T 1fjm_A 57 APLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVD 95 (330)
T ss_dssp SSEEEECBCTTCHHHHHHHHHHHCSTTSSCEEECSCCSS
T ss_pred CceEEecCCCCCHHHHHHHHHHhCCCCcceEEeCCCcCC
Confidence 468999999976321 12233222234577999999995
No 96
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Probab=94.59 E-value=0.04 Score=46.13 Aligned_cols=38 Identities=37% Similarity=0.401 Sum_probs=31.7
Q ss_pred EEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCCCC
Q 008343 167 VRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDSSS 204 (569)
Q Consensus 167 v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~g~ 204 (569)
++|+||+|+|.|.+||...+. +.+|+...|+|.+..++
T Consensus 64 ~~i~~L~p~t~Y~f~V~A~~~~G~g~~S~~~~~~T~~~~gp 104 (107)
T 1x5a_A 64 VLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPPSGP 104 (107)
T ss_dssp EEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCCCSCC
T ss_pred EEECCCCCCCEEEEEEEEECCCccCCCCCCEEEEECCCCCC
Confidence 789999999999999976442 36888999999987665
No 97
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.53 E-value=0.42 Score=39.92 Aligned_cols=38 Identities=16% Similarity=0.110 Sum_probs=29.6
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~ 202 (569)
..+.|++|+|+|.|.+||...+. ..+|+...|+|.+..
T Consensus 76 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 116 (121)
T 2dlh_A 76 QITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGS 116 (121)
T ss_dssp SEECCBSCCSSCEEEEEEEEEESSCBCCCCCCEEEECCCCC
T ss_pred eEEEecCCCCCCEEEEEEEEEeCCccCCCCCCEEEECCCCC
Confidence 45689999999999999965332 357888899997654
No 98
>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}
Probab=94.51 E-value=0.38 Score=40.15 Aligned_cols=39 Identities=21% Similarity=0.227 Sum_probs=28.5
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC--CCccceeEEEcCCCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSI--PAMSGTYCFRTMPDSS 203 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~--~~~S~~~~F~T~P~~g 203 (569)
..++|+||+|||.|.++|..... ...+....++|.|.+.
T Consensus 59 t~~~i~gL~PgT~Y~~~V~A~~~~~~~~p~~~~~~T~p~p~ 99 (104)
T 2dle_A 59 PRAVIPGLRSSTFYNITVCPVLGDIEGTPGFLQVHTPPVPS 99 (104)
T ss_dssp SEEECCSCCSSCEEEEEEEEESSSCCCBCEEEEEECCCCSC
T ss_pred CEEEECCCCCCCEEEEEEEEEECCcccCCeeEEEEccCCCC
Confidence 36789999999999999976332 2444567788887653
No 99
>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.44 E-value=0.24 Score=40.98 Aligned_cols=86 Identities=17% Similarity=0.227 Sum_probs=49.2
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCeE
Q 008343 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (569)
Q Consensus 85 ~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~~ 164 (569)
.|..+.++-- +.+++.|+|.-.... ...=.|+|....+. ...+ . . .+-.
T Consensus 10 ~P~~l~v~~~-~~~sv~lsW~~p~~~-----------i~~Y~i~y~~~~~~-~~~~----~-----~---------~~~~ 58 (105)
T 2cum_A 10 APRDLEAKEV-TPRTALLTWTEPPVR-----------PAGYLLSFHTPGGQ-TQEI----L-----L---------PGGI 58 (105)
T ss_dssp CCEEEEEESC-CSSCEEEEEECCSSC-----------CSEEEEEEECTTSC-EEEE----E-----E---------CSSC
T ss_pred CCCceEEEec-cCCEEEEEEcCCCCc-----------cceEEEEEEeCCCc-eEEE----E-----E---------CCCc
Confidence 4777766533 368999999753210 01235777654321 1110 0 0 0112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCc--cceeEEEcCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSIPAM--SGTYCFRTMPD 201 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~~~--S~~~~F~T~P~ 201 (569)
..++|+||+|+|.|.++|...+..+. .....|+|...
T Consensus 59 ts~~l~~L~p~t~Y~~~V~A~~~~g~s~~~~~~~~T~~~ 97 (105)
T 2cum_A 59 TSHQLLGLFPSTSYNARLQAMWGQSLLPPVSTSFTTGGL 97 (105)
T ss_dssp SEEEECSCCTTCEEEEEEEEEBTTBCCCCEEEEEECCCS
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCcccCCEEEEEEeCCc
Confidence 36789999999999999976443333 34567888654
No 100
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.43 E-value=0.32 Score=39.74 Aligned_cols=87 Identities=17% Similarity=0.213 Sum_probs=49.0
Q ss_pred CCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCeEE
Q 008343 86 PEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGIIH 165 (569)
Q Consensus 86 P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~~h 165 (569)
|. +.+... +.+++.|+|.-.....|. ...=.|+|........... .. .....
T Consensus 11 p~-~~v~~~-~~~sv~l~W~~p~~~~g~--------i~~Y~v~~~~~~~~~~~~~-----~~-------------~~~~~ 62 (107)
T 2dn7_A 11 PT-MMISTT-AMNTALLQWHPPKELPGE--------LLGYRLQYCRADEARPNTI-----DF-------------GKDDQ 62 (107)
T ss_dssp CE-EEEEEC-STTEEEEEEECCSSCSSC--------CCEEEEEEEETTCSSCEEE-----EE-------------ETTCC
T ss_pred Cc-EeEEec-CCCEEEEEECCCCCCCCc--------eeEEEEEEEECCCCCCEEE-----Ee-------------CCCcc
Confidence 44 555544 578999999874321110 1123577765543322221 00 01123
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC---CccceeEEEcCCC
Q 008343 166 HVRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTMPD 201 (569)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~P~ 201 (569)
.++|++|+|+|.|.+||...+.. .+|. ..|+|...
T Consensus 63 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~-~~~~T~~~ 100 (107)
T 2dn7_A 63 HFTVTGLHKGTTYIFRLAAKNRAGLGEEFE-KEIRTPED 100 (107)
T ss_dssp EEEEECCCTTCEEEEEEEEEETTEEEEEEE-EEEECCCC
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCcccCCee-eEEeCCCC
Confidence 56789999999999999765533 2344 45777543
No 101
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C
Probab=94.38 E-value=0.23 Score=40.95 Aligned_cols=89 Identities=15% Similarity=0.078 Sum_probs=49.8
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcc--cccCCCCCCCCCCCccEEEEcccCCCC--ceEEEeEEEEeeeecccCCcccc
Q 008343 84 FEPEQISVSLSSAHDSVWISWITGEF--QIGNNLKPLDPKSVVSVVRYGTRRSQL--NRKATGRSLVYSQLYPFLGLQNY 159 (569)
Q Consensus 84 ~~P~qi~ls~~~~p~s~~I~W~T~~~--~~g~~~~~~~p~~~~~~V~yg~~~~~~--~~~~~g~~~~y~~~~p~~g~~~~ 159 (569)
..|..+.+..- +.+++.|+|.-... ..|. -..=.|.|....... .... .+. .+
T Consensus 6 ~~P~~~~~~~~-s~tsi~v~W~~p~~~~~ng~--------i~gY~v~y~~~~~~~~~~~~~----~~v------~~---- 62 (102)
T 3n1f_C 6 TGPHIAYTEAV-SDTQIMLKWTYIPSSNNNTP--------IQGFYIYYRPTDSDNDSDYKR----DVV------EG---- 62 (102)
T ss_dssp SCCEEEEEEEC-SSSCEEEEEECCC-----CC--------CCEEEEEEEETTCCCGGGCEE----EEE------ET----
T ss_pred CCCceeEEEEc-CCCEEEEEeECCChhhcCCc--------cceEEEEEEECCCCCCCceEE----EEE------cC----
Confidence 35777766433 36899999986432 1111 012257776654321 1100 000 00
Q ss_pred ccCeEEEEEeCCCCCCCEEEEEEecCC---CCCccceeEEEc
Q 008343 160 TSGIIHHVRLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRT 198 (569)
Q Consensus 160 ~~~~~h~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T 198 (569)
-..++.|++|+|+|.|.++|..-+ .+..|+...++|
T Consensus 63 ---~~~~~~l~~L~p~t~Y~v~V~A~n~~G~G~~S~~~~~~T 101 (102)
T 3n1f_C 63 ---SKQWHMIGHLQPETSYDIKMQCFNEGGESEFSNVMICET 101 (102)
T ss_dssp ---TCSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred ---CceEEECCCCCCCCEEEEEEEEECCCcCCCCCCCEEeec
Confidence 112468999999999999996433 235677777776
No 102
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=94.34 E-value=0.52 Score=43.54 Aligned_cols=103 Identities=12% Similarity=0.093 Sum_probs=56.9
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCeE
Q 008343 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (569)
Q Consensus 85 ~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~~ 164 (569)
.|..+.+.-. ..+++.|+|.-... . ....=.|+|....+....... .. ..-.
T Consensus 25 ~P~~l~~~~~-~~~sv~lsW~~p~~---~-------~i~~Y~v~~~~~~~~~~~~~~----~~-------------~~~~ 76 (203)
T 2gee_A 25 QPTDLSFVDI-TDSSIGLRWTPLNS---S-------TIIGYRITVVAAGEGIPIFED----FV-------------DSSV 76 (203)
T ss_dssp CCEEEEEECC-TTTCEEEEEECCSS---S-------SCCEEEEEEEESSSSSCCEEE----EE-------------ETTC
T ss_pred CCCccEEEec-CCCEEEEEecCCCC---C-------CccEEEEEEEECCCCCCceeE----Ec-------------CCCc
Confidence 4766665433 36899999986431 1 011235666654433221110 00 0112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCccceeEEEcCCCCCCCCCCeEEEEEcc
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSIPAMSGTYCFRTMPDSSSTSYPSRIAIVGD 216 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~P~~g~~~~~~rfavigD 216 (569)
..+.|++|+|+|.|.++|...+..+.|....+.|...... ...+++..+++
T Consensus 77 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~t~~~~p~-P~~l~~~~~~~ 127 (203)
T 2gee_A 77 GYYTVTGLEPGIDYDISVYTVKNGGESTPTTLTQQTAVPP-PTDLRFTNIGP 127 (203)
T ss_dssp CEEEECSCCTTCEEEEEEEEESSSCBCCCEEEEEECCCCC-CEEEEEEEEET
T ss_pred cEEEeCCCCCCCEEEEEEEEEeCCCccccEeeeecCCCcC-CCceEEEEcCC
Confidence 3567899999999999997765556676666666543332 12344444443
No 103
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}
Probab=94.28 E-value=0.14 Score=43.67 Aligned_cols=37 Identities=30% Similarity=0.400 Sum_probs=29.2
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008343 166 HVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (569)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~ 202 (569)
.++|++|+|+|+|.+||...+. +.+|+...|+|.|..
T Consensus 68 ~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~t~~~~ 107 (122)
T 2e3v_A 68 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVR 107 (122)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCCC
T ss_pred eEEeCCCCCCCEEEEEEEEEeCCccCCCcccccccccCCC
Confidence 5688999999999999965432 357788888887754
No 104
>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.28 E-value=0.22 Score=41.89 Aligned_cols=38 Identities=18% Similarity=0.107 Sum_probs=26.8
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCC--ccceeEEEcCCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSIPA--MSGTYCFRTMPDS 202 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~~--~S~~~~F~T~P~~ 202 (569)
..+.|+||+|+|.|.++|...+... ......|+|.+.+
T Consensus 59 t~~~l~~L~P~t~Y~~~V~A~~~~~~s~~~~~~~~T~~~~ 98 (115)
T 2cuh_A 59 VDYPLHDLVLHTNYTATVRGLRGPNLTSPASITFTTGLEA 98 (115)
T ss_dssp SEEEECSCCSSSEEEEEEEEEETTEECCCEEEEEESCCCC
T ss_pred cEEEEeCCCCCCEEEEEEEEEeCCCcCCCEEEEEEeCCCC
Confidence 3578999999999999996544222 2335678887543
No 105
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=94.18 E-value=0.35 Score=45.78 Aligned_cols=103 Identities=16% Similarity=0.189 Sum_probs=58.3
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008343 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (569)
Q Consensus 84 ~~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~ 163 (569)
..|..+.+.-. +.+++.|+|.-.. |. ...=.|+|....+....... .. ..
T Consensus 7 ~~P~~l~~~~~-~~~si~l~W~~p~---g~--------i~~Y~v~~~~~~~~~~~~~~-----~~-------------~~ 56 (234)
T 3f7q_A 7 GAPQNPNAKAA-GSRKIHFNWLPPS---GK--------PMGYRVKYWIQGDSESEAHL-----LD-------------SK 56 (234)
T ss_dssp CCCEEEEEEEC-SSSCEEEEEECCS---SC--------CCEEEEEEEETTSCGGGCEE-----EE-------------ES
T ss_pred CCCcceEEEEc-CCCEEEEEEECCC---Cc--------cceEEEEEEECCCCccceEE-----Ec-------------CC
Confidence 45788877543 3689999998642 11 11235667654332211100 00 01
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCCCCCCCCeEEEEEcc
Q 008343 164 IHHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDSSSTSYPSRIAIVGD 216 (569)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~g~~~~~~rfavigD 216 (569)
...+.|++|+|+|.|.++|...+. ..+|....++|..........+++..+++
T Consensus 57 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~~T~~~~P~~P~~l~~~~~~~ 112 (234)
T 3f7q_A 57 VPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSS 112 (234)
T ss_dssp SSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCCCCCCCCCCEEEECSS
T ss_pred ccEEEECCCCCCCEEEEEEEEEeCCCcCCCCCeEEEEcCCCCCCCCCccEEEEecC
Confidence 135678999999999999965432 24677888988754322222345544443
No 106
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=94.13 E-value=0.16 Score=42.91 Aligned_cols=77 Identities=22% Similarity=0.299 Sum_probs=42.4
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccC-CCCceEEEeEEEEeeeecccCCccccccCe
Q 008343 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRR-SQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (569)
Q Consensus 85 ~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~-~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~ 163 (569)
.|..+.+.-- ..+++.|+|.- +..+.. + ...=.|+|.... +..+..+... . .+-
T Consensus 20 ~P~~~~~~~~-~~~sv~l~W~p--~~~~~~--~----i~~Y~v~~~~~~~~~~w~~~~~~-------~---------~~~ 74 (121)
T 1x4z_A 20 APDRPTISTA-SETSVYVTWIP--RGNGGF--P----IQSFRVEYKKLKKVGDWILATSA-------I---------PPS 74 (121)
T ss_dssp CCCCCEEEEC-CSSEEEEECCC--CCCTTS--C----CCEEEEEEEESSSCCCCEEEEEE-------E---------CTT
T ss_pred cCCCCEEEEc-cCCEEEEEEEC--CCCCCC--c----ceEEEEEEEECCCCCceEEeecc-------c---------CCC
Confidence 4666655433 36799999983 211110 0 012357776654 2222221110 0 111
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 008343 164 IHHVRLTGLKPDTLYHYQCGDPS 186 (569)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~ 186 (569)
...++|++|+|+|.|.|||...+
T Consensus 75 ~~~~~v~~L~p~t~Y~frV~A~n 97 (121)
T 1x4z_A 75 RLSVEITGLEKGISYKFRVRALN 97 (121)
T ss_dssp CCEEEEESCCTTCEEEEEEEEEE
T ss_pred cCEEEECCCCCCCEEEEEEEEEc
Confidence 24567899999999999997654
No 107
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=93.94 E-value=0.19 Score=45.59 Aligned_cols=88 Identities=19% Similarity=0.118 Sum_probs=48.4
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008343 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (569)
Q Consensus 84 ~~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~ 163 (569)
..|..+.+.- -+.+++.|+|.-.. |. ...=.|+|....+...... .. .+-
T Consensus 96 ~~P~~l~~~~-~~~~sv~l~W~~p~---~~--------i~~Y~v~~~~~~~~~~~~~-----~~-------------~~~ 145 (186)
T 1qr4_A 96 GSPKGISFSD-ITENSATVSWTPPR---SR--------VDSYRVSYVPITGGTPNVV-----TV-------------DGS 145 (186)
T ss_dssp CCCSCEEEES-CCSSCEEEEECCCS---SC--------CSEEEEEEEETTCCCCEEE-----EE-------------ETT
T ss_pred CCCCccEEEE-eCCCEEEEEEECCC---Cc--------ccEEEEEEEeCCCCCceEE-----Ec-------------CCC
Confidence 4577776643 34689999997432 11 1123566655443211111 00 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCccc--eeEEEcCCC
Q 008343 164 IHHVRLTGLKPDTLYHYQCGDPSIPAMSG--TYCFRTMPD 201 (569)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~P~ 201 (569)
...+.|+||+|+|.|.++|...+..+.|+ ...|+|.|.
T Consensus 146 ~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~pd 185 (186)
T 1qr4_A 146 KTRTKLVKLVPGVDYNVNIISVKGFEESEPISGILKTALD 185 (186)
T ss_dssp CCEEEECSCCSSCEEEEEEEEEETTEECCCEEEEEEC---
T ss_pred cCEEEEcCCCCCCEEEEEEEEEcCCCcCcCEEEEEEecCC
Confidence 24567899999999999997644334443 457777764
No 108
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.90 E-value=0.12 Score=43.67 Aligned_cols=38 Identities=26% Similarity=0.214 Sum_probs=29.5
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~ 202 (569)
..+.|+||+|+|.|.+||...+. +.+|+...|+|.+..
T Consensus 80 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 120 (125)
T 1uen_A 80 THGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGS 120 (125)
T ss_dssp SEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCCC
T ss_pred cEEEeCCCCCCCEEEEEEEEecCCCCCCCCCCEEEECCCCC
Confidence 46788999999999999965432 257788899997654
No 109
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=93.85 E-value=0.052 Score=55.05 Aligned_cols=23 Identities=13% Similarity=0.176 Sum_probs=19.3
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 008343 399 RVAMEDLLYKYGVDVVFNGHVHA 421 (569)
Q Consensus 399 r~~l~~ll~~~~VdlvlsGH~H~ 421 (569)
.+..++.++++++++++=||.-.
T Consensus 233 ~~~~~~fl~~n~l~~iiR~Hq~~ 255 (315)
T 3h63_A 233 PDVTKAFLEENNLDYIIRSHEVK 255 (315)
T ss_dssp HHHHHHHHHHHTCSEEEECCSCC
T ss_pred HHHHHHHHHHcCCcEEEEeceee
Confidence 35677889999999999999864
No 110
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=93.81 E-value=0.038 Score=55.66 Aligned_cols=23 Identities=17% Similarity=0.271 Sum_probs=19.3
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 008343 399 RVAMEDLLYKYGVDVVFNGHVHA 421 (569)
Q Consensus 399 r~~l~~ll~~~~VdlvlsGH~H~ 421 (569)
.+.+.+.++++++++++=||.=.
T Consensus 228 ~~~~~~fl~~n~l~~IiR~Hq~v 250 (299)
T 3e7a_A 228 AEVVAKFLHKHDLDLICRAHQVV 250 (299)
T ss_dssp HHHHHHHHHHHTCSEEEECCSCC
T ss_pred HHHHHHHHHHCCCeEEEEcCeee
Confidence 35678899999999999999853
No 111
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=93.81 E-value=0.25 Score=44.74 Aligned_cols=88 Identities=16% Similarity=0.071 Sum_probs=50.9
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008343 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (569)
Q Consensus 84 ~~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~ 163 (569)
..|..+.+.-- ..+++.|+|.-.... ...=.|+|....+. ... ... .+-
T Consensus 8 ~~P~~l~~~~~-~~~sv~l~W~~p~~~-----------i~~Y~v~~~~~~~~-~~~-----~~~-------------~~~ 56 (186)
T 1qr4_A 8 DNPKDLEVSDP-TETTLSLRWRRPVAK-----------FDRYRLTYVSPSGK-KNE-----MEI-------------PVD 56 (186)
T ss_dssp CCCEEEEEESC-CSSEEEEEEECCSSC-----------CSEEEEEEECTTCC-EEE-----EEE-------------CTT
T ss_pred cCCCceEEEec-CCCEEEEEEeCCCCC-----------ccEEEEEEEeCCCC-eeE-----EEC-------------CCC
Confidence 35777776533 368999999864211 11235667643221 100 000 001
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCccc--eeEEEcCCCC
Q 008343 164 IHHVRLTGLKPDTLYHYQCGDPSIPAMSG--TYCFRTMPDS 202 (569)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~P~~ 202 (569)
...+.|+||+|+|.|.++|...+....|. ...++|.|.+
T Consensus 57 ~~~~~i~~L~p~t~Y~~~V~a~~~~~~s~~~~~~~~t~p~~ 97 (186)
T 1qr4_A 57 STSFILRGLDAGTEYTISLVAEKGRHKSKPTTIKGSTVVGS 97 (186)
T ss_dssp CSEEEEESCCSSCEEEEEEEEESSSCBCCCEEEEEECCCCC
T ss_pred CCEEEECCCCCCCEEEEEEEEEcCCccCCCEEEEEECCCCC
Confidence 13457899999999999997655444444 4667776544
No 112
>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.81 E-value=0.032 Score=49.52 Aligned_cols=47 Identities=26% Similarity=0.322 Sum_probs=34.2
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCCCCCCCCeEE
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDSSSTSYPSRI 211 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~g~~~~~~rf 211 (569)
..++|+||+|+|.|.+||..... +..|+...|+|.+...+...++++
T Consensus 82 ts~~v~~L~P~T~Y~~rV~A~n~~G~G~~S~~~~f~T~~~~P~~P~~p~l 131 (137)
T 1wk0_A 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCEPDIPNPPRI 131 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCSSSCCCSCSCC
T ss_pred cEEEEcCCCCCCEEEEEEEEEeCCCcCCCCCCEEEECCCCCCCCCCCCEE
Confidence 46789999999999999965432 357888999998765433334444
No 113
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=93.74 E-value=0.075 Score=56.91 Aligned_cols=25 Identities=16% Similarity=0.179 Sum_probs=20.5
Q ss_pred HHHHHHHHHcCCcEEEEccccCcce
Q 008343 400 VAMEDLLYKYGVDVVFNGHVHAYER 424 (569)
Q Consensus 400 ~~l~~ll~~~~VdlvlsGH~H~yeR 424 (569)
+.+...+.++++++++.||.+..+-
T Consensus 387 ~~~~~fl~~~~~~~iir~H~~~~~g 411 (477)
T 1wao_1 387 DVTKAFLEENNLDYIIRSHEVKAEG 411 (477)
T ss_dssp HHHHHHHHHTTCCEEEECCSCCTEE
T ss_pred HHHHHHHHHcCCeEEEECCCCCcCC
Confidence 4567788999999999999987443
No 114
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=93.72 E-value=0.066 Score=54.74 Aligned_cols=23 Identities=13% Similarity=0.174 Sum_probs=19.6
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 008343 399 RVAMEDLLYKYGVDVVFNGHVHA 421 (569)
Q Consensus 399 r~~l~~ll~~~~VdlvlsGH~H~ 421 (569)
.+.+.+.++++++++++=||.-.
T Consensus 237 ~~~~~~fl~~n~l~~IiR~Hq~~ 259 (335)
T 3icf_A 237 PDITDRFLRNNKLRKIFRSHELR 259 (335)
T ss_dssp HHHHHHHHHHTTCSEEEECSSCC
T ss_pred HHHHHHHHHHCCCeEEEEcCcee
Confidence 35677889999999999999865
No 115
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=93.63 E-value=0.046 Score=56.25 Aligned_cols=37 Identities=16% Similarity=0.156 Sum_probs=24.2
Q ss_pred EEEEEcccCCCCCh-HHHHHHHHhCCCCEEEEcCCccc
Q 008343 210 RIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTY 246 (569)
Q Consensus 210 rfavigD~g~~~~~-~~~~~~l~~~~pDfvl~~GDl~Y 246 (569)
+++++||+|..... .+.++.......+-++++||+++
T Consensus 71 pi~ViGDIHG~~~dL~~ll~~~g~~~~~~~vfLGD~VD 108 (357)
T 3ll8_A 71 PVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVD 108 (357)
T ss_dssp SEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSS
T ss_pred cceeeccCCCCHHHHHHHHHhcCCCCCcEEEECCCccC
Confidence 68999999976322 12222222234578999999995
No 116
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.60 E-value=0.16 Score=42.43 Aligned_cols=37 Identities=22% Similarity=0.269 Sum_probs=25.3
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC---CccceeE-EEcCCCC
Q 008343 166 HVRLTGLKPDTLYHYQCGDPSIP---AMSGTYC-FRTMPDS 202 (569)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~-F~T~P~~ 202 (569)
.++|++|+|+|.|.|||...+.. .+|..-. ++|.+.+
T Consensus 73 ~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~t~~~~ 113 (117)
T 1uem_A 73 LYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDSG 113 (117)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEEEEECCCCCCEECCCSS
T ss_pred EEEECCCCCCCEEEEEEEEECCCccCCCcCCCccEEccCCC
Confidence 46789999999999999765433 2344333 6666543
No 117
>3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B*
Probab=93.48 E-value=0.43 Score=45.82 Aligned_cols=98 Identities=18% Similarity=0.210 Sum_probs=59.6
Q ss_pred CCCCCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCC-CCceEEEeEEEEeeeecccCCcccc
Q 008343 81 VEGFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRS-QLNRKATGRSLVYSQLYPFLGLQNY 159 (569)
Q Consensus 81 ~~~~~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~-~~~~~~~g~~~~y~~~~p~~g~~~~ 159 (569)
+....|..+.+....++.++.|+|.......+. . ....-.|+|..... ..+..+..
T Consensus 111 VKPdPP~nLtv~~~~~~~~l~LsW~~P~~~~~~-~-----~~L~YEVrYr~~~~~~~W~~v~~----------------- 167 (223)
T 3up1_A 111 VKPEAPFDLSVVYREGANDFVVTFNTSHLQKKY-V-----KVLMHDVAYRQEKDENKWTHVNL----------------- 167 (223)
T ss_dssp BCCCCCEEEEEEEETTTTEEEEEEECGGGGCSS-S-----CCEEEEEEEEESSCSSCCEEEEE-----------------
T ss_pred EEcCCCcceEEEEEcCCCCEEEEECCCCCCCCc-c-----eeEEEEEEEEeCCCCCceEEEEe-----------------
Confidence 344568888888877677899999985421110 0 01234677776532 22222110
Q ss_pred ccCeEEEEEeCCCCCCCEEEEEEecCC-------CCCccceeEEEcCCCC
Q 008343 160 TSGIIHHVRLTGLKPDTLYHYQCGDPS-------IPAMSGTYCFRTMPDS 202 (569)
Q Consensus 160 ~~~~~h~v~l~gL~P~T~Y~Yrvg~~~-------~~~~S~~~~F~T~P~~ 202 (569)
......+.+.+|+|+|.|..||.... -..||+...|+|++.+
T Consensus 168 -~~t~~~i~l~~L~Pgt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~~ 216 (223)
T 3up1_A 168 -SSTKLTLLQRKLQPAAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEIN 216 (223)
T ss_dssp -SSSEEEEEGGGSCTTCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCCC
T ss_pred -cCceeEEeccccCCCcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCCC
Confidence 01123556789999999999985432 1267788999997654
No 118
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.27 E-value=0.23 Score=41.96 Aligned_cols=24 Identities=17% Similarity=0.393 Sum_probs=19.6
Q ss_pred EEEeCCCCCCCEEEEEEecCCCCC
Q 008343 166 HVRLTGLKPDTLYHYQCGDPSIPA 189 (569)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~~~ 189 (569)
..+++||+|+|.|.|||...+..+
T Consensus 69 ~~~v~~L~p~t~Y~frV~A~N~~G 92 (112)
T 1bpv_A 69 EFTVSGLTEDAAYEFRVIAKNAAG 92 (112)
T ss_dssp EEEECSCCSSCCEEEEEEEECTTS
T ss_pred EEEECCCCCCCEEEEEEEEEECCC
Confidence 457899999999999998766444
No 119
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=93.27 E-value=0.24 Score=46.05 Aligned_cols=96 Identities=17% Similarity=0.108 Sum_probs=54.4
Q ss_pred CCCCCeEEEEec-CCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCcccccc
Q 008343 83 GFEPEQISVSLS-SAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTS 161 (569)
Q Consensus 83 ~~~P~qi~ls~~-~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~ 161 (569)
...|..+.+... .+++++.|+|.......|. ...=.|+|....+.....+.- . . ..
T Consensus 104 p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~--------i~~Y~v~y~~~~~~~~~~~~~----------~-~----~~ 160 (215)
T 1bqu_A 104 PNPPHNLSVINSEELSSILKLTWTNPSIKSVI--------ILKYNIQYRTKDASTWSQIPP----------E-D----TA 160 (215)
T ss_dssp CCCCEEEEEECC--CCSCEEEEEECCGGGGTS--------CEEEEEEEEETTCSSCEECCG----------G-G----GC
T ss_pred CCCCCceEEEEecCCCceEEEEEeCCCCCCcc--------eEEEEEEEccCCCCCceEecc----------c-c----cc
Confidence 346777777653 3568999999864321110 012356665543222211100 0 0 01
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecCCC------CCccceeEEEcCCC
Q 008343 162 GIIHHVRLTGLKPDTLYHYQCGDPSI------PAMSGTYCFRTMPD 201 (569)
Q Consensus 162 ~~~h~v~l~gL~P~T~Y~Yrvg~~~~------~~~S~~~~F~T~P~ 201 (569)
+....++|++|+|+|.|.+||...+. ..||+...++|.+.
T Consensus 161 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~~ 206 (215)
T 1bqu_A 161 STRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 206 (215)
T ss_dssp SCCSEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECCC
T ss_pred CccceEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCccccccccc
Confidence 12245689999999999999965421 23777888988754
No 120
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.21 E-value=0.18 Score=41.75 Aligned_cols=23 Identities=17% Similarity=0.223 Sum_probs=18.8
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSI 187 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~ 187 (569)
...+|++|+|++.|.|||...+.
T Consensus 65 ~~~~v~~L~p~t~Y~frV~A~n~ 87 (110)
T 2yuw_A 65 TKFTITGLPTDAKIFVRVKAVNA 87 (110)
T ss_dssp SEEEECSCCTTCEEEEEEEEEET
T ss_pred CEEEECCCCCCCEEEEEEEEEcC
Confidence 35678999999999999976553
No 121
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=93.08 E-value=0.2 Score=41.64 Aligned_cols=78 Identities=10% Similarity=0.046 Sum_probs=42.4
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008343 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (569)
Q Consensus 84 ~~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~ 163 (569)
..|..+.+.-. +.+++.|+|.-....-|.. ...=.|+|.......+..+. . ...-
T Consensus 10 ~~P~~l~~~~~-~~~sv~l~W~~p~~~~~~~-------i~~Y~v~~~~~~~~~w~~~~-~----------------~~~~ 64 (111)
T 1x5y_A 10 SAPQHLTVEDV-TDTTTTLKWRPPDRIGAGG-------IDGYLVEYCLEGSEEWVPAN-K----------------EPVE 64 (111)
T ss_dssp CCCEEEEEEEE-CSSEEEEEEECCSCCCSSC-------CCEEEEEEEETTCCCCEESS-S----------------SCBS
T ss_pred cCCCCCEEEec-cCCEEEEEECCCCcCCCCc-------ccEEEEEEEECCCCceEEcc-c----------------cCCc
Confidence 35777766543 3689999998643211100 11224666544332221100 0 0011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 008343 164 IHHVRLTGLKPDTLYHYQCGDPS 186 (569)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~ 186 (569)
...++|++|+|+|.|.|||...+
T Consensus 65 ~~~~~v~~L~p~t~Y~frV~A~n 87 (111)
T 1x5y_A 65 RCGFTVKDLPTGARILFRVVGVN 87 (111)
T ss_dssp SSEEEEECCCTTCCEEEEEEEEE
T ss_pred ccEEEECCCCCCCEEEEEEEEEc
Confidence 23567899999999999997654
No 122
>3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum}
Probab=93.00 E-value=0.69 Score=38.50 Aligned_cols=33 Identities=21% Similarity=0.114 Sum_probs=22.5
Q ss_pred EeCCCCCCCEEEEEEecCCC---CCccceeEEEcCC
Q 008343 168 RLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMP 200 (569)
Q Consensus 168 ~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P 200 (569)
..++|+||++|+|+|..-+. ...|...+.++..
T Consensus 60 ~d~~l~~g~~Y~Y~V~Avn~~geS~~S~~vs~~~~~ 95 (103)
T 3mpc_A 60 TDTGVATGTKYYYVVSAVSNGVETLNSAEAILQYPK 95 (103)
T ss_dssp EETTCCTTCCCEEEEEEEETTEECCCCCCEECBCCC
T ss_pred EECCCCCCCEEEEEEEEEeCcCCcCCCccEEEECCc
Confidence 34799999999999965332 2455666665543
No 123
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=92.91 E-value=0.53 Score=43.70 Aligned_cols=93 Identities=14% Similarity=0.108 Sum_probs=55.0
Q ss_pred CCCCCeEEEEecC-----CCCceEEEEEcCcccccCCCCCCCCCCCccEEEEc-ccCCCCceEEEeEEEEeeeecccCCc
Q 008343 83 GFEPEQISVSLSS-----AHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYG-TRRSQLNRKATGRSLVYSQLYPFLGL 156 (569)
Q Consensus 83 ~~~P~qi~ls~~~-----~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg-~~~~~~~~~~~g~~~~y~~~~p~~g~ 156 (569)
...|..+.+.... .++++.|+|..... .|.. ...=.|+|. ...+..+..+.-.
T Consensus 109 p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~-~~~~-------~l~Y~v~y~~~~~~~~w~~~~~~------------- 167 (215)
T 1cd9_B 109 LEPPMLQALDIGPDVVSHQPGCLWLSWKPWKP-SEYM-------EQECELRYQPQLKGANWTLVFHL------------- 167 (215)
T ss_dssp CCCCEEEECCC-------CCSCEEEEEECCGG-GTTS-------CEEEEEEEEESSTTCCCEEEEEE-------------
T ss_pred eCCCcEEEEEEeccccCCCCCeEEEEEeCCCC-CCeE-------EEEEEEEEccCCCCCCcEEEecc-------------
Confidence 3457777665532 46889999986432 1110 013467887 4443333222100
Q ss_pred cccccCeEEEEEeCCCCCCCEEEEEEecCC---C---CCccceeEEEcCC
Q 008343 157 QNYTSGIIHHVRLTGLKPDTLYHYQCGDPS---I---PAMSGTYCFRTMP 200 (569)
Q Consensus 157 ~~~~~~~~h~v~l~gL~P~T~Y~Yrvg~~~---~---~~~S~~~~F~T~P 200 (569)
.+....+.|.+|+|+|.|.+||.... . ..||+...|+|+.
T Consensus 168 ----~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e 213 (215)
T 1cd9_B 168 ----PSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213 (215)
T ss_dssp ----ESCEEEEEECCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred ----cCcceEEEEcCCCCCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence 01124678999999999999986432 1 2578888999875
No 124
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=92.74 E-value=0.41 Score=47.23 Aligned_cols=95 Identities=16% Similarity=0.078 Sum_probs=54.9
Q ss_pred CCCCCeEEEEec-CCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCcccccc
Q 008343 83 GFEPEQISVSLS-SAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTS 161 (569)
Q Consensus 83 ~~~P~qi~ls~~-~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~ 161 (569)
+..|..+.+... .+++++.|+|.-.....|. ...=.|+|.......+..+.- .. ..
T Consensus 200 p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~--------i~~Y~v~y~~~~~~~w~~~~~----------~~-----~~ 256 (303)
T 1i1r_A 200 PNPPHNLSVINSEELSSILKLTWTNPSIKSVI--------ILKYNIQYRTKDASTWSQIPP----------ED-----TA 256 (303)
T ss_dssp CCCCEEEEEECCSSSSSCEEEEEECCGGGGTS--------CEEEEEEEEETTCSSCEECCG----------GG-----GC
T ss_pred cCCCcceEEEEecCCCCEEEEEECCCCCCCcc--------cEEEEEEEEeCCCCCceEEcc----------cc-----CC
Confidence 345777777643 3578999999864421110 012356666554322221100 00 01
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecCCC------CCccceeEEEcCC
Q 008343 162 GIIHHVRLTGLKPDTLYHYQCGDPSI------PAMSGTYCFRTMP 200 (569)
Q Consensus 162 ~~~h~v~l~gL~P~T~Y~Yrvg~~~~------~~~S~~~~F~T~P 200 (569)
+-...+.|++|+|+|.|.+||...+. ..||+...|+|+.
T Consensus 257 ~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 257 STRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp SCCSEEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred CceeEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 12245689999999999999965321 2567888999864
No 125
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=92.61 E-value=0.73 Score=42.68 Aligned_cols=94 Identities=14% Similarity=0.161 Sum_probs=55.7
Q ss_pred CCCCCeEEEEecC---CCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCcccc
Q 008343 83 GFEPEQISVSLSS---AHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNY 159 (569)
Q Consensus 83 ~~~P~qi~ls~~~---~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~ 159 (569)
...|..+.+.... .++++.|+|.......... +-....=.|+|....+....... .
T Consensus 103 p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~----g~~~~~Y~v~y~~~~~~~~~~~~------~----------- 161 (210)
T 3n06_B 103 PDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKT----GWFTLLYEIRLKPEKAAEWEIHF------A----------- 161 (210)
T ss_dssp CCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTT----SSCCEEEEEEEECTTCSSCEEEE------E-----------
T ss_pred cCCCceEEEEEecCcCCCceEEEEcCCCCCccccC----CeEEEEEEEEEecCCCCCCEEEe------c-----------
Confidence 4568888877643 4689999998643211000 00011235777665443222110 0
Q ss_pred ccCeEEEEEeCCCCCCCEEEEEEecCC---C-CCccceeEEEcC
Q 008343 160 TSGIIHHVRLTGLKPDTLYHYQCGDPS---I-PAMSGTYCFRTM 199 (569)
Q Consensus 160 ~~~~~h~v~l~gL~P~T~Y~Yrvg~~~---~-~~~S~~~~F~T~ 199 (569)
+....+.|.+|+|+|.|..||.... . +.||+...|+|+
T Consensus 162 --~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp 203 (210)
T 3n06_B 162 --GQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIP 203 (210)
T ss_dssp --ETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred --cCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCceeEECc
Confidence 0113567899999999999996432 1 368888999995
No 126
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=92.41 E-value=0.088 Score=56.60 Aligned_cols=23 Identities=13% Similarity=0.130 Sum_probs=19.7
Q ss_pred HHHHHHHHHcCCcEEEEccccCc
Q 008343 400 VAMEDLLYKYGVDVVFNGHVHAY 422 (569)
Q Consensus 400 ~~l~~ll~~~~VdlvlsGH~H~y 422 (569)
+.+.+.+.++++++++-||.-..
T Consensus 263 d~v~~FL~~n~l~lIIRaHq~v~ 285 (521)
T 1aui_A 263 PAVCEFLQHNNLLSILRAHEAQD 285 (521)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCT
T ss_pred HHHHHHHHHcCCcEEEEccchhc
Confidence 56778899999999999998753
No 127
>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B*
Probab=92.37 E-value=0.54 Score=44.54 Aligned_cols=96 Identities=21% Similarity=0.232 Sum_probs=55.9
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008343 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (569)
Q Consensus 84 ~~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~ 163 (569)
..|..|++...+ .+++.|+|......... + ....=.|+|....+. +..+ ..... ..-
T Consensus 107 ~pP~~l~~~~~~-~~~l~lsW~~p~~~~~~-----~-~~l~Yevry~~~~~~-w~~~--~~~~~-------------~~~ 163 (214)
T 2b5i_B 107 MAPISLQVVHVE-THRCNISWEISQASHYF-----E-RHLEFEARTLSPGHT-WEEA--PLLTL-------------KQK 163 (214)
T ss_dssp CCCEEEEEEEEC-SSCEEEEEECCSCCGGG-----T-TCEEEEEEEECTTSC-STTS--CCEEE-------------CSC
T ss_pred CCCceEEEEEec-CCeEEEEECCCCccccC-----C-CceEEEEEEecCCCC-hhee--eeeee-------------ccc
Confidence 568888887655 46899999875321000 0 011235777654321 1110 00000 112
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC-------CCccceeEEEcCCCC
Q 008343 164 IHHVRLTGLKPDTLYHYQCGDPSI-------PAMSGTYCFRTMPDS 202 (569)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~-------~~~S~~~~F~T~P~~ 202 (569)
.+.+.|.+|+|||.|..||..... +.||+...|+|.|.+
T Consensus 164 ~~~~~l~~L~p~t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~~ 209 (214)
T 2b5i_B 164 QEWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPAA 209 (214)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC--
T ss_pred ceEEEeccCCCCCEEEEEEEEeeCCCCCCCccCCCCCEEEEcCCCC
Confidence 246788999999999999964421 378889999998764
No 128
>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A
Probab=92.23 E-value=0.55 Score=38.45 Aligned_cols=74 Identities=19% Similarity=0.223 Sum_probs=42.7
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCC-ceEEEeEEEEeeeecccCCccccccCe
Q 008343 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQL-NRKATGRSLVYSQLYPFLGLQNYTSGI 163 (569)
Q Consensus 85 ~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~-~~~~~g~~~~y~~~~p~~g~~~~~~~~ 163 (569)
.|..+++.-- +.+++.|+|.-... .|. ...=.|+|....+.. ..... .+ +-
T Consensus 7 ~P~~l~v~~~-t~~Sv~l~W~~p~~-~~~--------i~~Y~v~y~~~~~~~~~~~~~---------v~---------~~ 58 (101)
T 3k2m_C 7 VPTKLEVVAA-TPTSLLISWDAPMS-SSS--------VYYYRITYGETGGNSPVQEFT---------VP---------YS 58 (101)
T ss_dssp SSCEEEEEEE-ETTEEEEEECCCCT-TSC--------CCEEEEEEEETTCSSCCEEEE---------EE---------TT
T ss_pred CCcceEEeec-CCCEEEEEecCCCC-CCc--------eeeEEEEEEECCCCCccEEEE---------cC---------CC
Confidence 5778877543 36899999975321 010 112257776543321 11110 01 01
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 008343 164 IHHVRLTGLKPDTLYHYQCGDPS 186 (569)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~ 186 (569)
...++|+||+|+|.|.++|....
T Consensus 59 ~t~~~l~~L~p~t~Y~~~V~A~~ 81 (101)
T 3k2m_C 59 SSTATISGLSPGVDYTITVYAWG 81 (101)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEE
T ss_pred ccEEEECCCCCCCEEEEEEEEEe
Confidence 23678999999999999997544
No 129
>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A
Probab=92.22 E-value=0.51 Score=44.73 Aligned_cols=92 Identities=13% Similarity=0.125 Sum_probs=54.7
Q ss_pred CCCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccC
Q 008343 83 GFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (569)
Q Consensus 83 ~~~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~ 162 (569)
...|..|++......+++.|+|...... +.. ....=.|+|....+..+.... .. ..
T Consensus 122 p~pP~~l~~~~~~~~~~l~v~W~~P~~~------~~~-~~l~Yev~y~~~~~~~w~~~~---~~--------------~~ 177 (227)
T 1eer_B 122 LDAPVGLVARLADESGHVVLRWLPPPET------PMT-SHIRYEVDVSAGQGAGSVQRV---EI--------------LE 177 (227)
T ss_dssp CCCCEEEEEEECSSTTCEEEEEECCSSC------SCG-GGEEEEEEEECCSSSCCCCEE---EE--------------CT
T ss_pred cCcCcceEEEEcCCCCeEEEEEcCCCCc------ccc-cceEEEEEEEcCCCCCcEEEE---EE--------------ec
Confidence 4568888887654468999999864321 000 011235677654432221100 00 00
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCC--------CCccceeEEEc
Q 008343 163 IIHHVRLTGLKPDTLYHYQCGDPSI--------PAMSGTYCFRT 198 (569)
Q Consensus 163 ~~h~v~l~gL~P~T~Y~Yrvg~~~~--------~~~S~~~~F~T 198 (569)
-...+.|.+|+|||.|..||..... +.||+...|+|
T Consensus 178 ~~~~~~l~~L~p~t~Y~vqVRa~~~~~~~~g~wS~WS~~~~~~t 221 (227)
T 1eer_B 178 GRTECVLSNLRGRTRYTFAVRARMAEPSFGGFWSEWSEPVSLLT 221 (227)
T ss_dssp TCCEEEECCCCSSCEEEEEEEEEECTTTCCEECCCCCCCEEEEC
T ss_pred CceEEEEcccCCCCeEEEEEEEeECCCCCCCcCCCCCCCEEEEC
Confidence 1235678999999999999965421 36888889998
No 130
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=92.19 E-value=0.54 Score=43.40 Aligned_cols=35 Identities=20% Similarity=0.231 Sum_probs=27.5
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCC
Q 008343 166 HVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMP 200 (569)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P 200 (569)
...|+||+|+|.|.|||...+. +.+|+...++|..
T Consensus 175 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 212 (214)
T 2ibg_A 175 SFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQR 212 (214)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCccCCCcceEeeEecC
Confidence 4578999999999999965442 3577888888864
No 131
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1
Probab=91.91 E-value=0.14 Score=44.13 Aligned_cols=37 Identities=27% Similarity=0.346 Sum_probs=29.4
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC---CccceeEEEcCCCC
Q 008343 166 HVRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTMPDS 202 (569)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~P~~ 202 (569)
.++++||+|+|+|.+||...+.. .+|+...++|++.+
T Consensus 76 ~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p 115 (120)
T 1wfu_A 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCCC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCCccEeeEcCCCC
Confidence 36789999999999999765533 56778899998763
No 132
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=91.91 E-value=1.2 Score=43.29 Aligned_cols=91 Identities=14% Similarity=0.053 Sum_probs=52.1
Q ss_pred CCCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccC
Q 008343 83 GFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (569)
Q Consensus 83 ~~~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~ 162 (569)
...|..+.+.-.. ++++.|+|.-... . ...=.|+|............ .. .+
T Consensus 21 p~~P~~l~~~~~~-~~sv~l~W~~p~~---~--------~~~Y~v~~~~~~~~~~~~~~----~~-------------~~ 71 (290)
T 3r8q_A 21 IPAPTDLKFTQVT-PTSLSAQWTPPNV---Q--------LTGYRVRVTPKEKTGPMKEI----NL-------------AP 71 (290)
T ss_dssp CCCCEEEEEEEEC-SSCEEEEEECCSS---C--------CCEEEEEEEESSSSSCCEEE----EE-------------CT
T ss_pred CCCCCceEEEECC-CCEEEEEEeCCCC---C--------eeEEEEEEEeCCCCCceEEE----Ec-------------CC
Confidence 3468888775443 7899999986421 0 11235677654422211110 00 11
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCCCCccc--eeEEEcCCCC
Q 008343 163 IIHHVRLTGLKPDTLYHYQCGDPSIPAMSG--TYCFRTMPDS 202 (569)
Q Consensus 163 ~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~P~~ 202 (569)
-...+.|++|+|+|.|.|+|...+..+.+. ...++|.+.+
T Consensus 72 ~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~~~t~~~~ 113 (290)
T 3r8q_A 72 DSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENV 113 (290)
T ss_dssp TCCEEEECSCCSSCEEEEEEEEEETTEECCCEEEEEECCCCC
T ss_pred CccEEEeCCCCCCCEEEEEEEEEeCCCCCCCcceeEecCCCC
Confidence 124678999999999999997544332222 3567776544
No 133
>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=91.86 E-value=0.85 Score=38.48 Aligned_cols=36 Identities=14% Similarity=0.056 Sum_probs=26.8
Q ss_pred EEEeCCCCCCCEEEEEEecCC---CCCccceeEEEcCCCC
Q 008343 166 HVRLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRTMPDS 202 (569)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~P~~ 202 (569)
.+.+. |+|+|.|.+||...+ .+.+|+...|+|....
T Consensus 74 ~~~~~-L~~~t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~~v 112 (117)
T 1wj3_A 74 SAELV-LPIKEDYIIEVKATTDGGDGTSSEQIRIPRITSS 112 (117)
T ss_dssp EEEEE-CCCSSCEEEEEEEEESSCCCCBCCCEEECCCCCC
T ss_pred EEEEE-CCCCCEEEEEEEEECCCccCCCCCCEEEEcCCCC
Confidence 45666 999999999996432 2467888899997543
No 134
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=91.78 E-value=1.8 Score=36.84 Aligned_cols=89 Identities=16% Similarity=0.094 Sum_probs=48.9
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCeE
Q 008343 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (569)
Q Consensus 85 ~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~~ 164 (569)
.|..+++.-.. +++.|+|.-.....|. + ..=.|+|.... ..... .. . .+-.
T Consensus 30 ~P~~l~~~~~~--~sv~l~W~~P~~~~g~-i-------~~Y~v~y~~~~-~~~~~-----~~----~---------~~~~ 80 (126)
T 1x5i_A 30 VPSSLHVRPLV--TSIVVSWTPPENQNIV-V-------RGYAIGYGIGS-PHAQT-----IK----V---------DYKQ 80 (126)
T ss_dssp SCSEEEEEEET--TEEEEEEECCSCTTBC-C-------CEEEEEECSSC-GGGEE-----EE----C---------CTTC
T ss_pred CCCeeEEEecC--CEEEEEEcCCCCCCCC-E-------eEEEEEEEcCC-CCceE-----EE----e---------CCCe
Confidence 68888776653 8999999865321110 1 12256666321 11100 00 0 1122
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCccc--eeEEEcCCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSIPAMSG--TYCFRTMPDS 202 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~P~~ 202 (569)
...+|++|+|+|.|.+||...+..+.+. ...++|.+..
T Consensus 81 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~T~~~~ 120 (126)
T 1x5i_A 81 RYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPHT 120 (126)
T ss_dssp CEEEECSCCSSCEECCEEEEECSSCBCCCCCCCEECCCCT
T ss_pred eEEEEeCCCCCCEEEEEEEEEeCCccCcceeeEEecccCC
Confidence 4568899999999999997655332222 2345565543
No 135
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=91.76 E-value=1.5 Score=42.18 Aligned_cols=91 Identities=21% Similarity=0.160 Sum_probs=50.9
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008343 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (569)
Q Consensus 84 ~~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~ 163 (569)
..|..+.+... +.+++.|+|.-.... ...=.|+|....+....... ... ..+-
T Consensus 106 ~~P~~l~~~~~-~~~sv~l~W~~p~~~-----------i~~Y~v~~~~~~~~~~~~~~-----~~~----------~~~~ 158 (283)
T 1tdq_A 106 DAPKNLRVGSR-TATSLDLEWDNSEAE-----------AQEYKVVYSTLAGEQYHEVL-----VPK----------GIGP 158 (283)
T ss_dssp CCCEEEEEEEE-CSSCEEEEEECCSSC-----------CSEEEEEEEETTCCCCEEEE-----EEC----------CSSS
T ss_pred CCCCceEEEec-CCCeEEEEecCCCCC-----------ccEEEEEEEeCCCCcceEEE-----CCC----------CCcc
Confidence 45777765433 367899999864310 12235667554432221110 000 0011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCccce--eEEEcCCC
Q 008343 164 IHHVRLTGLKPDTLYHYQCGDPSIPAMSGT--YCFRTMPD 201 (569)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~--~~F~T~P~ 201 (569)
...+.|++|+|+|.|.++|...+..+.|.. ..+.|.|.
T Consensus 159 ~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~~~ 198 (283)
T 1tdq_A 159 TTKTTLTDLVPGTEYGVGISAVMNSKQSIPATMNARTELD 198 (283)
T ss_dssp EEEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCC
T ss_pred cceEEEecCCCCCEEEEEEEEEeCCCCCcceEEEecCCCC
Confidence 467789999999999999976554444543 44555543
No 136
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=91.70 E-value=0.48 Score=42.74 Aligned_cols=81 Identities=19% Similarity=0.267 Sum_probs=45.9
Q ss_pred CCCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccC
Q 008343 83 GFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (569)
Q Consensus 83 ~~~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~ 162 (569)
...|..+.+.-.. .+++.|+|.......|.. ...=.|+|..............
T Consensus 103 p~~p~~~~~~~~~-~~~v~l~W~~p~~~~~~~-------i~~Y~v~~~~~~~~~~~~~~~~------------------- 155 (197)
T 3lpw_A 103 PLPPGKITLMDVT-RNSVSLSWEKPEHDGGSR-------ILGYIVEMQTKGSDKWATCATV------------------- 155 (197)
T ss_dssp CCCCSCEEEEEEC-SSCEEEEECCCSCCTTSC-------CCEEEEEEEETTCSCCEEEEEE-------------------
T ss_pred CCCCcccEEEecc-CCeEEEEecCCCcCCCCc-------ccEEEEEEEeCCCCceEEeecc-------------------
Confidence 3467777765333 689999998643211100 1123566665443332221100
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCCCCc
Q 008343 163 IIHHVRLTGLKPDTLYHYQCGDPSIPAM 190 (569)
Q Consensus 163 ~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~ 190 (569)
-...+.+++|+|+|.|.|+|...+..+.
T Consensus 156 ~~~~~~~~~L~p~t~Y~~~V~A~n~~G~ 183 (197)
T 3lpw_A 156 KVTEATITGLIQGEEYSFRVSAQNEKGI 183 (197)
T ss_dssp SSSEEEECCCCTTCEEEEEEEEEETTEE
T ss_pred cccEEEeCCcCCCCEEEEEEEEEeCCcc
Confidence 0124578999999999999976553333
No 137
>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens}
Probab=91.30 E-value=0.56 Score=40.08 Aligned_cols=74 Identities=20% Similarity=0.302 Sum_probs=43.3
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008343 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (569)
Q Consensus 84 ~~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~ 163 (569)
..|..+.+.-- +.+++.|+|.-.... ...=.|+|....+...... .. .+ +-
T Consensus 30 ~~P~~l~v~~~-t~~Si~lsW~~p~~~-----------i~~Y~V~y~~~~~~~~~~~----~~----v~---------~~ 80 (121)
T 2ocf_D 30 DVPTKLEVVAA-TPTSLLISWDAPAVT-----------VRYYRITYGETGGNSPVQE----FT----VP---------GS 80 (121)
T ss_dssp CSCEEEEEEEE-CSSCEEEEEECCSSC-----------CCEEEEEEEETTTCSCBEE----EE----EE---------TT
T ss_pred CCCCccEEEec-CCCEEEEEEcCCCCC-----------CcEEEEEEEECCCCCccEE----EE----eC---------CC
Confidence 45788877643 368999999753210 1123566765443211100 00 00 11
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 008343 164 IHHVRLTGLKPDTLYHYQCGDPS 186 (569)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~ 186 (569)
.-.+.|+||+|+|.|.++|...+
T Consensus 81 ~t~~~l~gL~P~t~Y~~~V~A~~ 103 (121)
T 2ocf_D 81 KSTATISGLKPGVDYTITVYAVT 103 (121)
T ss_dssp CCEEEECCCCTTCEEEEEEEEEC
T ss_pred cCEEEeCCCCCCCEEEEEEEEEe
Confidence 23678999999999999997654
No 138
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=91.29 E-value=0.4 Score=46.58 Aligned_cols=36 Identities=22% Similarity=0.251 Sum_probs=28.5
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC--CccceeEEEcCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSIP--AMSGTYCFRTMP 200 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~--~~S~~~~F~T~P 200 (569)
...+|+||+|+|.|.+||...+.. .+|+...|+|++
T Consensus 253 ~~~~~~~L~p~t~Y~~~V~A~n~~Gg~~s~~~~~~T~~ 290 (290)
T 3l5i_A 253 TEYTLSSLTSDTLYMVRMAAYTDEGGKDGPEFTFTTPK 290 (290)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEEEECCCEEEECCC
T ss_pred eEEEeCCCCCCCEEEEEEEEEeCCCCCCCCceEeecCC
Confidence 356799999999999999654432 488889999964
No 139
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=91.24 E-value=0.68 Score=38.94 Aligned_cols=93 Identities=18% Similarity=0.074 Sum_probs=53.7
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008343 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (569)
Q Consensus 84 ~~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~ 163 (569)
..|..+.+.. ..+++.++|.-... |.. + -..=.|+|.. .+..+..+... + .+-
T Consensus 9 ~pP~~l~v~~--~~~sv~L~W~pP~~--~~~--~----I~gY~vey~~-~~~~W~~~~~~---~-------------~~~ 61 (108)
T 1v5j_A 9 SPPRGLVAVR--TPRGVLLHWDPPEL--VPK--R----LDGYVLEGRQ-GSQGWEVLDPA---V-------------AGT 61 (108)
T ss_dssp CCCEEEEEEE--CSSSEEEEEECCSC--CSS--C----CCBEEEEEEE-TTCCCEEEEEE---E-------------CSS
T ss_pred CCCcceEEEE--eCCEEEEEECCCCC--CCC--C----CcEEEEEEEe-CCCCcEEeeee---c-------------CCC
Confidence 4577777764 35789999987542 110 0 1123678876 33333322111 1 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCC---CccceeEEEcCCCCC
Q 008343 164 IHHVRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTMPDSS 203 (569)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~P~~g 203 (569)
..+.+|.+|+|+++|.+||...+.. ..|+...++|....+
T Consensus 62 ~t~~~v~~L~pg~~Y~FRV~A~n~~G~s~pS~~~~v~T~~~~~ 104 (108)
T 1v5j_A 62 ETELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGLSG 104 (108)
T ss_dssp CCEEECCCCCTTSCEECCBEEEETTEEEEECSCCCCCCSSCSS
T ss_pred cCEEEeCCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEeCCccc
Confidence 2355789999999999999655432 445566666655443
No 140
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=91.19 E-value=0.73 Score=46.38 Aligned_cols=93 Identities=11% Similarity=0.049 Sum_probs=53.6
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008343 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (569)
Q Consensus 84 ~~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~ 163 (569)
..|..+.+.-..+..++.|+|.-... + ....=.|+|....+....... ..+ .+.
T Consensus 3 ~~P~~l~~~~~~~~~sv~l~W~~~~~--~--------~i~~Y~v~~~~~~~~~~~~~~---~~~-------------~~~ 56 (368)
T 1fnf_A 3 SPPTNLHLEANPDTGVLTVSWERSTT--P--------DITGYRITTTPTNGQQGNSLE---EVV-------------HAD 56 (368)
T ss_dssp CCCEEEEEEECSSSSCEEEEEECCSC--S--------SCCEEEEEEEETTTCSSCCEE---EEE-------------CTT
T ss_pred CCCcceEEEecCCCcEEEEEEeCCCC--C--------CceEEEEEEEECCCCCCceeE---EEe-------------cCC
Confidence 35888887755434579999987431 1 112236677654432211000 000 111
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCccceeEEEcCCCC
Q 008343 164 IHHVRLTGLKPDTLYHYQCGDPSIPAMSGTYCFRTMPDS 202 (569)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~P~~ 202 (569)
...+.|++|+|+|.|.|||...+..+.|...+..+.+..
T Consensus 57 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~~~ 95 (368)
T 1fnf_A 57 QSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIPAV 95 (368)
T ss_dssp CCEEECCCCCTTSCEEEEEEEEETTEECCCEEEEECCCC
T ss_pred cCEEEECCCCCCCEEEEEEEEEcCCCccCceeeeecCCC
Confidence 246789999999999999976554456665555555543
No 141
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=91.18 E-value=0.53 Score=43.49 Aligned_cols=92 Identities=17% Similarity=0.190 Sum_probs=53.6
Q ss_pred CCCCeEEEEecC-CCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCce--EEEeEEEEeeeecccCCccccc
Q 008343 84 FEPEQISVSLSS-AHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNR--KATGRSLVYSQLYPFLGLQNYT 160 (569)
Q Consensus 84 ~~P~qi~ls~~~-~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~--~~~g~~~~y~~~~p~~g~~~~~ 160 (569)
..|..+.+...+ .++++.|+|.-.....| . ...=.|+|......... ... ..
T Consensus 107 ~~P~~~~~~~~~~s~~sv~l~W~~p~~~~g-~-------i~~Y~v~~~~~~~~~~~~~~~~----~~------------- 161 (211)
T 3p4l_A 107 SPPKDVTVVSKEGKPKTIIVNWQPPSEANG-K-------ITGYIIYYSTDVNAEIHDWVIE----PV------------- 161 (211)
T ss_dssp SCCEEEEEEEETTEEEEEEEEEECCTTCCS-C-------CCEEEEEEESCTTSCGGGSEEE----EE-------------
T ss_pred CCCcceEEEecCCCCCEEEEEECCCCCCCC-C-------EEEEEEEEEECCCCCCCceEEE----Ee-------------
Confidence 367788776664 36899999986432111 0 01225666654432211 100 00
Q ss_pred cCeEEEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCC
Q 008343 161 SGIIHHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMP 200 (569)
Q Consensus 161 ~~~~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P 200 (569)
.+-...+.|+||+|+|.|.+||...+. +.+|+...|+|..
T Consensus 162 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 162 VGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp ESSCSEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECC-
T ss_pred cCCeeEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEccCcc
Confidence 011235678999999999999965432 3678888888764
No 142
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=91.14 E-value=0.67 Score=50.41 Aligned_cols=37 Identities=32% Similarity=0.313 Sum_probs=28.9
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCC
Q 008343 166 HVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDS 202 (569)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~ 202 (569)
.++|+||+|+|.|.+||...+. +.+|+...|+|++..
T Consensus 496 s~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T~~~~ 535 (536)
T 3fl7_A 496 SVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTLSPE 535 (536)
T ss_dssp EEECCSCCSSCEEEEEEEEECC---CEECCCEEEECCC--
T ss_pred EEEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEeCCCC
Confidence 5689999999999999965442 357889999998754
No 143
>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*
Probab=91.13 E-value=0.49 Score=40.02 Aligned_cols=71 Identities=24% Similarity=0.385 Sum_probs=42.1
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCC-ceEEEeEEEEeeeecccCCccccccCe
Q 008343 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQL-NRKATGRSLVYSQLYPFLGLQNYTSGI 163 (569)
Q Consensus 85 ~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~-~~~~~g~~~~y~~~~p~~g~~~~~~~~ 163 (569)
.|..+.+.-- +.+++.|+|...... ...=.|+|....+.. .... . .+ +-
T Consensus 6 ~P~~L~v~~~-t~~Sv~lsW~~p~g~-----------i~~Y~v~y~~~~~~~~~~~~-----~----v~---------~~ 55 (114)
T 3qwq_B 6 VPRDLEVVAA-TPTSLLISWDSGRGS-----------YQYYRITYGETGGNSPVQEF-----T----VP---------GP 55 (114)
T ss_dssp CCEEEEEEEE-ETTEEEEEEECCSCC-----------CSEEEEEEEESSCSSCCEEE-----E----EE---------TT
T ss_pred CCCceEEEec-CCCEEEEEEcCCcCc-----------ccEEEEEEEECCCCCccEEE-----E----eC---------CC
Confidence 5777776543 368999999864211 112357776654321 1110 0 00 11
Q ss_pred EEEEEeCCCCCCCEEEEEEecC
Q 008343 164 IHHVRLTGLKPDTLYHYQCGDP 185 (569)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~ 185 (569)
.-.++|+||+|+|.|.++|...
T Consensus 56 ~ts~~l~gL~P~T~Y~v~V~A~ 77 (114)
T 3qwq_B 56 VHTATISGLKPGVDYTITVYAV 77 (114)
T ss_dssp CCEEEECSCCTTCEEEEEEEEE
T ss_pred cCEEEeCCCCCCCEEEEEEEEE
Confidence 2357899999999999998643
No 144
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=91.10 E-value=1.2 Score=37.73 Aligned_cols=34 Identities=15% Similarity=0.069 Sum_probs=24.5
Q ss_pred eCCCCCCCEEEEEEecCCCC---Cccce-eEEEcCCCC
Q 008343 169 LTGLKPDTLYHYQCGDPSIP---AMSGT-YCFRTMPDS 202 (569)
Q Consensus 169 l~gL~P~T~Y~Yrvg~~~~~---~~S~~-~~F~T~P~~ 202 (569)
+.+|+|+|.|.|||...+.. .+|.. ..|+|.+..
T Consensus 78 i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~~ 115 (127)
T 1uey_A 78 QLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASE 115 (127)
T ss_dssp EECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCSS
T ss_pred EecCCCCCEEEEEEEEEeCCccCCccccccceEcCCCC
Confidence 56999999999999764432 45555 478887643
No 145
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=91.05 E-value=0.86 Score=45.10 Aligned_cols=94 Identities=17% Similarity=0.004 Sum_probs=55.2
Q ss_pred CCCCCeEEEEecC-----CCCceEEEEEcCcccccCCCCCCCCCCCccEEEEc-ccCCCCceEEEeEEEEeeeecccCCc
Q 008343 83 GFEPEQISVSLSS-----AHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYG-TRRSQLNRKATGRSLVYSQLYPFLGL 156 (569)
Q Consensus 83 ~~~P~qi~ls~~~-----~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg-~~~~~~~~~~~g~~~~y~~~~p~~g~ 156 (569)
...|..+.+.... .++++.|+|..... .|. ....=.|+|. ...+..+..+...
T Consensus 203 p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~-~~~-------~~l~Y~v~y~~~~~~~~w~~~~~~------------- 261 (313)
T 2d9q_B 203 LEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQP-GLH-------INQKCELRHKPQRGEASWALVGPL------------- 261 (313)
T ss_dssp CCCCEEEECCC-------CCSCEEEEEECCGG-GTT-------SCEEEEEEEEESSSCCCCEEEEEE-------------
T ss_pred cCcCceeEEEEecccccCCCCeEEEEECCCCC-CCc-------eeEEEEEEEccCCCCCCcEEcccc-------------
Confidence 3457666555432 46899999986432 111 0113467887 4443333322100
Q ss_pred cccccCeEEEEEeCCCCCCCEEEEEEecCC---CC---CccceeEEEcCCC
Q 008343 157 QNYTSGIIHHVRLTGLKPDTLYHYQCGDPS---IP---AMSGTYCFRTMPD 201 (569)
Q Consensus 157 ~~~~~~~~h~v~l~gL~P~T~Y~Yrvg~~~---~~---~~S~~~~F~T~P~ 201 (569)
....+.+.|.+|+|+|.|.+||...+ .+ .||+...|+|+..
T Consensus 262 ----~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~~ 308 (313)
T 2d9q_B 262 ----PLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTER 308 (313)
T ss_dssp ----CSCEEEEEECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC-
T ss_pred ----cCcceEEEEeCCCCCCeEEEEEEeeECCCCCccCCCCCccceeCCcc
Confidence 11235678999999999999996432 12 4778889998764
No 146
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.89 E-value=1.5 Score=36.33 Aligned_cols=36 Identities=14% Similarity=0.179 Sum_probs=24.4
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCC---ccc-eeEEEcCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSIPA---MSG-TYCFRTMP 200 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~~---~S~-~~~F~T~P 200 (569)
..+.|++|+|+|.|.+||...+..+ +|. ...++|.+
T Consensus 73 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~t~~ 112 (118)
T 2yrz_A 73 TSVVVEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQV 112 (118)
T ss_dssp CEEEEESCCTTCEEEEEEEEEESSCEEEEEEEEEECCCSC
T ss_pred CEEEeCCCCCCCEEEEEEEEEcCCcCCCCcCCceEeCCCC
Confidence 3567899999999999997654333 444 34444443
No 147
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=90.78 E-value=0.54 Score=43.50 Aligned_cols=22 Identities=27% Similarity=0.347 Sum_probs=18.7
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPS 186 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~ 186 (569)
..++|+||+|+|.|.++|..-.
T Consensus 157 t~~~l~gL~p~t~Y~~~V~A~~ 178 (195)
T 2qbw_A 157 STATISGLKPGVDYTITVYAYS 178 (195)
T ss_dssp SEEEECSCCTTCEEEEEEEEES
T ss_pred CEEEeCCCCCCCEEEEEEEEEe
Confidence 4678999999999999997644
No 148
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=90.55 E-value=1 Score=45.43 Aligned_cols=91 Identities=11% Similarity=0.080 Sum_probs=53.0
Q ss_pred CCCCeEEEEecCCCC-ceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccC
Q 008343 84 FEPEQISVSLSSAHD-SVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (569)
Q Consensus 84 ~~P~qi~ls~~~~p~-s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~ 162 (569)
..|..|.+.-.. .+ ++.|+|.-... + ....=.|+|....+....... . .. .+
T Consensus 4 ~~P~~l~~~~~~-~~~sv~l~W~~~~~--~--------~~~~Y~v~~~~~~~~~~~~~~-~--~~-------------~~ 56 (375)
T 3t1w_A 4 SPPTNLHLEANP-DTGVLTVSWERSTT--P--------DITGYRITTTPTNGQQGNSLE-E--VV-------------HA 56 (375)
T ss_dssp CCCEEEEEEEET-TTTEEEEEEECCSC--S--------SCCEEEEEEEETTCTTSCCEE-E--EE-------------ET
T ss_pred CCCCccEEEecC-CCeEEEEEEeCCCC--C--------CeeeEEEEEEECCCCCCccee-E--Ec-------------CC
Confidence 357777776544 55 99999986431 1 112235777654432111100 0 00 01
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCCCCccceeEEEcCCC
Q 008343 163 IIHHVRLTGLKPDTLYHYQCGDPSIPAMSGTYCFRTMPD 201 (569)
Q Consensus 163 ~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~P~ 201 (569)
-...+.|++|+|+|.|.|+|...+..+.|.....++.+.
T Consensus 57 ~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~~ 95 (375)
T 3t1w_A 57 DQSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIPE 95 (375)
T ss_dssp TCCEEEECCCCTTCCEEEEEEEEETTEECCCEEEEECCC
T ss_pred CccEEEEcCCcCCCEEEEEEEEEcCCCCCCcEEeeEcCC
Confidence 124567899999999999997665556676666665443
No 149
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=90.18 E-value=0.96 Score=37.70 Aligned_cols=37 Identities=16% Similarity=0.168 Sum_probs=25.4
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---Ccccee-EEEcCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSIP---AMSGTY-CFRTMPD 201 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~-~F~T~P~ 201 (569)
..++|++|+|+|.|.|||...+.. .+|..- .++|.+.
T Consensus 76 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~t~~~ 116 (121)
T 1wf5_A 76 TSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPES 116 (121)
T ss_dssp CEEEEESCCTTCEEEEEEEEEESSCEEEECCCCSCEECCCC
T ss_pred cEEEECCcCCCCEEEEEEEEEcCCccCCCcCCcceeEcCCC
Confidence 356889999999999999765433 334443 4666554
No 150
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}
Probab=90.05 E-value=0.61 Score=37.76 Aligned_cols=72 Identities=18% Similarity=0.254 Sum_probs=41.8
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCC-ceEEEeEEEEeeeecccCCccccccCe
Q 008343 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQL-NRKATGRSLVYSQLYPFLGLQNYTSGI 163 (569)
Q Consensus 85 ~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~-~~~~~g~~~~y~~~~p~~g~~~~~~~~ 163 (569)
.|..+++.-- +.+++.|+|.-.... ...=.|+|....+.. .... . . ++-
T Consensus 7 ~P~~l~v~~~-t~~Si~lsW~~p~~~-----------i~~Y~v~y~~~~~~~~~~~~-----~----v---------~~~ 56 (97)
T 3qht_C 7 VPTKLEVVAA-TPTSLLISWDASSSS-----------VSYYRITYGETGGNSPVQEF-----T----V---------PGS 56 (97)
T ss_dssp SSSSCEEEEE-ETTEEEEECCCCCSS-----------CCEEEEEEEESSSCSCCEEE-----E----E---------ETT
T ss_pred CCCceEEEec-CCCEEEEEEeCCCCC-----------CCEEEEEEEECCCCCccEEE-----E----e---------CCC
Confidence 5777766543 368999999753210 012356676544321 1110 0 0 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 008343 164 IHHVRLTGLKPDTLYHYQCGDPS 186 (569)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~ 186 (569)
...++|+||+|+|.|.++|..-.
T Consensus 57 ~t~~~l~~L~p~t~Y~v~V~A~~ 79 (97)
T 3qht_C 57 SSTATISGLSPGVDYTITVYAYY 79 (97)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEE
T ss_pred cCEEEeCCCCCCCEEEEEEEEEe
Confidence 24678999999999999997543
No 151
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=89.87 E-value=2.1 Score=41.20 Aligned_cols=101 Identities=16% Similarity=0.212 Sum_probs=56.0
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008343 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (569)
Q Consensus 84 ~~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~ 163 (569)
..|.++.+.-.. .+++.|+|.-.. +. ...=.|+|.......... .... ...
T Consensus 16 ~~P~~l~~~~~~-~~sv~l~W~~~~---~~--------~~~Y~v~~~~~~~~~~~~----~~~~-------------~~~ 66 (283)
T 1tdq_A 16 DGPTQILVRDVS-DTVAFVEWTPPR---AK--------VDFILLKYGLVGGEGGKT----TFRL-------------QPP 66 (283)
T ss_dssp CCCEEEEEEEEC-SSCEEEEEECCS---SC--------CSEEEEEEEESSSSCCCE----EEEE-------------CTT
T ss_pred CCCcEEEEEecC-CCeEEEEEECCC---Cc--------eeEEEEEEEEecCCCCcE----EEEe-------------CCC
Confidence 457888765443 689999998643 10 122367775432211110 0000 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCcc--ceeEEEcCCCCCCCCCCeEEEEEcc
Q 008343 164 IHHVRLTGLKPDTLYHYQCGDPSIPAMS--GTYCFRTMPDSSSTSYPSRIAIVGD 216 (569)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S--~~~~F~T~P~~g~~~~~~rfavigD 216 (569)
...+.|++|+|+|.|.++|...+..+.| ....|+|.|.+.. .+++..+++
T Consensus 67 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~t~p~~P~---~l~~~~~~~ 118 (283)
T 1tdq_A 67 LSQYSVQALRPGSRYEVSISAVRGTNESDASSTQFTTEIDAPK---NLRVGSRTA 118 (283)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCE---EEEEEEECS
T ss_pred CCEEEecCCCCCCEEEEEEEEECCCCCCCCeeEEEECCCCCCC---ceEEEecCC
Confidence 2356789999999999999765433333 3456777665421 345544444
No 152
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=89.65 E-value=1.7 Score=39.74 Aligned_cols=91 Identities=14% Similarity=0.145 Sum_probs=50.9
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCC-CceEEEeEEEEeeeecccCCccccccCe
Q 008343 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQ-LNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (569)
Q Consensus 85 ~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~-~~~~~~g~~~~y~~~~p~~g~~~~~~~~ 163 (569)
.|..+.+.- ..+++.|+|.-.... +.. ...=.|+|...... .+...... .+ + .
T Consensus 8 ~P~~~~~~~--~~~sv~l~W~~p~~~-~~~-------i~~Y~v~~~~~~~~~~w~~~~~~-------~~--~-------~ 61 (205)
T 1cfb_A 8 APKLTGITC--QADKAEIHWEQQGDN-RSP-------ILHYTIQFNTSFTPASWDAAYEK-------VP--N-------T 61 (205)
T ss_dssp CCEEEEEEE--CSSEEEEEEECCCCT-TSC-------CCEEEEEEEESSSTTCCEEEEEE-------EE--T-------T
T ss_pred CCCCcEEEe--cCCEEEEEEECcccC-CCc-------eEEEEEEEecCCCCCCceeeeec-------cC--C-------C
Confidence 688888877 689999999864211 110 11235777654321 12111111 00 0 0
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCcc-ceeEEEcCCCC
Q 008343 164 IHHVRLTGLKPDTLYHYQCGDPSI---PAMS-GTYCFRTMPDS 202 (569)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S-~~~~F~T~P~~ 202 (569)
.....+ +|+|+|.|.|||...+. ..+| ....++|.+..
T Consensus 62 ~~~~~~-~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~~T~~~~ 103 (205)
T 1cfb_A 62 DSSFVV-QMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDV 103 (205)
T ss_dssp CSEEEE-ECCSSEEEEEEEEEEETTEECCCCCCCCCEEECCCC
T ss_pred ceEEEE-eCCCCCEEEEEEEEEECCccCCCCCCceeEEcCCcC
Confidence 113346 99999999999965432 2455 45778887643
No 153
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1
Probab=89.53 E-value=2.2 Score=35.86 Aligned_cols=23 Identities=22% Similarity=0.316 Sum_probs=19.3
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 008343 164 IHHVRLTGLKPDTLYHYQCGDPS 186 (569)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~ 186 (569)
...++|+||+|+|.|.+||...+
T Consensus 70 ~~~~~v~~L~p~t~Y~FRV~A~N 92 (115)
T 2ic2_A 70 SFTASVTDLKPQHTYRFRILAVY 92 (115)
T ss_dssp EEEEEECSCCSSEEEEEEEEEEE
T ss_pred eeEEEeCCCCCCCEEEEEEEEEe
Confidence 34678999999999999997654
No 154
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=89.36 E-value=1.4 Score=42.78 Aligned_cols=88 Identities=20% Similarity=0.105 Sum_probs=49.5
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008343 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (569)
Q Consensus 84 ~~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~ 163 (569)
..|..+.+.- ...+++.|+|.-.... ...=.|+|....+...... .. ...
T Consensus 114 ~~P~~l~~~~-~~~~sv~l~W~~p~~~-----------~~~Y~v~~~~~~~~~~~~~-----~~-------------~~~ 163 (290)
T 3r8q_A 114 SPPRRARVTD-ATETTITISWRTKTET-----------ITGFQVDAVPANGQTPIQR-----TI-------------KPD 163 (290)
T ss_dssp CCCEEEEEEE-ECSSCEEEEEECCSCC-----------CCEEEEEEEESSSCCCEEE-----EE-------------CTT
T ss_pred CCCceeEEEE-cCCCeEEEEEeCCCCc-----------ccEEEEEEEECCCCcceEE-----ec-------------CCC
Confidence 4577776663 2368899999864210 1223566655443221110 00 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCccc--eeEEEcCCC
Q 008343 164 IHHVRLTGLKPDTLYHYQCGDPSIPAMSG--TYCFRTMPD 201 (569)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~P~ 201 (569)
...+.|+||+|+|.|.++|...+..+.|. ...++|.|.
T Consensus 164 ~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~p~ 203 (290)
T 3r8q_A 164 VRSYTITGLQPGTDYKIYLYTLNDNARSSPVVIDASTAID 203 (290)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCC
T ss_pred ccEEEECCCCCCCEEEEEEEEEeCCcccCCEEEEecCCCC
Confidence 23467899999999999997655334443 345566654
No 155
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.34 E-value=0.98 Score=37.88 Aligned_cols=88 Identities=10% Similarity=0.058 Sum_probs=47.6
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCeE
Q 008343 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (569)
Q Consensus 85 ~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~~ 164 (569)
.|..+++.-.. +++.|+|.-.....|. + ..=.|+|..... ..... .. ..-.
T Consensus 20 ~P~~l~~~~~~--~sv~l~W~~P~~~ng~-i-------~gY~i~y~~~~~-~~~~~-----~~-------------~~~~ 70 (116)
T 2edb_A 20 QPSSLHVRPQT--NCIIMSWTPPLNPNIV-V-------RGYIIGYGVGSP-YAETV-----RV-------------DSKQ 70 (116)
T ss_dssp CCSCEEEEECS--SCEEEEECCCSCTTBC-C-------CEEEEEEEESST-TSEEE-----EE-------------ETTC
T ss_pred CCCCeEEEECC--CEEEEEEcCCCCCCCc-e-------eEEEEEEEeCCC-CeEEE-----Ee-------------CCCe
Confidence 57888776553 8999999754321110 0 122566654221 11110 00 0112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCccc--eeEEEcCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSIPAMSG--TYCFRTMPD 201 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~P~ 201 (569)
..++|++|+|+|.|.+||...+..+.+. ...++|.+.
T Consensus 71 ~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~~~~~~~T~~~ 109 (116)
T 2edb_A 71 RYYSIERLESSSHYVISLKAFNNAGEGVPLYESATTRSI 109 (116)
T ss_dssp CEEEECSCCSSSBEEEEEEEEETTEECSCEEECCBCCCS
T ss_pred eEEEeCCCCCCCEEEEEEEEEeCCccCCCCcceeecccC
Confidence 3568899999999999997654333322 234555543
No 156
>1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=89.19 E-value=2.2 Score=34.81 Aligned_cols=88 Identities=19% Similarity=0.242 Sum_probs=53.6
Q ss_pred CCCCCeEEEEecC-CCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCC-ceEEEeEEEEeeeecccCCccccc
Q 008343 83 GFEPEQISVSLSS-AHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQL-NRKATGRSLVYSQLYPFLGLQNYT 160 (569)
Q Consensus 83 ~~~P~qi~ls~~~-~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~-~~~~~g~~~~y~~~~p~~g~~~~~ 160 (569)
..-|.|+.++-++ .|++-.|.|...... | -..-.+.|....... ++.+. -
T Consensus 5 ~~gpa~v~is~~~s~pdsh~iqW~~~s~s------~----I~eyiL~~R~k~~~g~Wke~~------------------I 56 (98)
T 1oww_A 5 SSGPVEVFITETPSQPNSHPIQWNAPQPS------H----ISKYILRWRPKNSVGRWKEAT------------------I 56 (98)
T ss_dssp -CCCCEEECCCCSSCTTCEEEEEECCSSS------C----EEEEEEEEEETTCSSCCEEEE------------------E
T ss_pred CCcceEEEecCCCCCCCccceEEecCCCC------C----ceEEEEEEEEcCCCCceeEEE------------------e
Confidence 3458888887664 379999999985431 0 012344444433221 11111 1
Q ss_pred cCeEEEEEeCCCCCCCEEEEEEecCCCCCccce--eEEEc
Q 008343 161 SGIIHHVRLTGLKPDTLYHYQCGDPSIPAMSGT--YCFRT 198 (569)
Q Consensus 161 ~~~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~--~~F~T 198 (569)
++.+..-+|+||+||.+|.=++-+-..-+|+++ |.|.|
T Consensus 57 p~h~nSYtI~GL~P~~~YE~qv~S~~ryG~~Evs~f~FtT 96 (98)
T 1oww_A 57 PGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTT 96 (98)
T ss_dssp CSSCCEEEECSCCSSEEEEEEEEEEESSSCEEEEEEEEEE
T ss_pred cCccceEEEecCCCCcEEEEEEEEeeccCcccceEEEEEe
Confidence 234455579999999999999987665577764 55655
No 157
>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=88.38 E-value=0.84 Score=36.47 Aligned_cols=35 Identities=20% Similarity=0.123 Sum_probs=25.0
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCccc--eeEEEcC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSIPAMSG--TYCFRTM 199 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~ 199 (569)
..+.|+||+|+|.|.++|..-+..+.|. ...++|.
T Consensus 55 ~~~~l~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~ 91 (94)
T 1j8k_A 55 DTAELQGLRPGSEYTVSVVALHDDMESQPLIGTQSTA 91 (94)
T ss_dssp CEEEECSCCCCSEEEEEEEECSSSCCCCCEEEEEECC
T ss_pred cEEEeCCCCCCCEEEEEEEEEcCCCcCCCEEeEEEec
Confidence 4678999999999999998765444443 3445554
No 158
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=88.22 E-value=2.1 Score=42.98 Aligned_cols=37 Identities=22% Similarity=0.228 Sum_probs=27.1
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---CccceeEEEcCCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTMPDS 202 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~P~~ 202 (569)
..+.|++|+|+|.|.+||...+.. .+| ...|+|.+.+
T Consensus 349 ~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s-~~~~~T~~~P 388 (389)
T 2jll_A 349 DHIILEHLQWTMGYEVQITAANRLGYSEPT-VYEFSMPPKP 388 (389)
T ss_dssp CEEEECSCCTTCEEEEEEEEEC-CCBCCCE-EEEEECCCCC
T ss_pred ceEEeCCcCCCCEEEEEEEEEcCCcCCCce-eeEecCCCCC
Confidence 456889999999999999765433 344 3488888764
No 159
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=88.12 E-value=1.7 Score=36.12 Aligned_cols=23 Identities=26% Similarity=0.300 Sum_probs=19.2
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSI 187 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~ 187 (569)
..+.|++|+|+|.|.+||...+.
T Consensus 74 ~~~~i~~L~p~t~Y~~~V~A~n~ 96 (119)
T 1wfn_A 74 LEYRVTGLTALTTYTIEVAAMTS 96 (119)
T ss_dssp CEEEEESCCTTCEEEEEEEEECS
T ss_pred eEEEEcCCCCCCEEEEEEEEEcC
Confidence 46788999999999999976553
No 160
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=88.04 E-value=1.8 Score=39.86 Aligned_cols=79 Identities=20% Similarity=0.203 Sum_probs=44.4
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCeE
Q 008343 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (569)
Q Consensus 85 ~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~~ 164 (569)
.|..+.+.-. +.+++.|+|.-... | ....=.|+|....+..... .... .+-.
T Consensus 116 ~P~~l~~~~~-~~~sv~l~W~~p~~--~--------~i~~Y~v~~~~~~~~~~~~----~~~~-------------~~~~ 167 (203)
T 2gee_A 116 PPTDLRFTNI-GPDTMRVTWAPPPS--I--------DLTNFLVRYSPVKNEEDVA----ELSI-------------SPSD 167 (203)
T ss_dssp CCEEEEEEEE-ETTEEEEEEECCSS--C--------CCSEEEEEEEETTCGGGCE----EEEE-------------CTTC
T ss_pred CCCceEEEEc-CCCEEEEEEcCCCC--C--------CccEEEEEEEECCCCCccE----EEEc-------------CCCc
Confidence 5777765433 36899999986421 1 0122356666533321111 0000 1122
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCcc
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSIPAMS 191 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S 191 (569)
..+.|+||+|+|.|.++|...+..+.|
T Consensus 168 ~~~~i~~L~p~t~Y~~~V~A~~~~g~s 194 (203)
T 2gee_A 168 NAVVLTNLLPGTEYVVSVSSVYEQHES 194 (203)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTEEC
T ss_pred CEEEECCCCCCCEEEEEEEEecCCCcC
Confidence 456889999999999999765533443
No 161
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=87.52 E-value=1.6 Score=35.81 Aligned_cols=76 Identities=20% Similarity=0.211 Sum_probs=42.7
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCeE
Q 008343 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (569)
Q Consensus 85 ~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~~ 164 (569)
.|..+++.-- +.+++.|+|.-.....|. ...=.|+|.......... .. . . .+-.
T Consensus 10 ~P~~l~v~~~-t~~Sv~lsW~~p~~~~g~--------i~~Y~v~y~~~~~~~~~~---~~-~----v---------~~~~ 63 (103)
T 3t04_D 10 VPTKLEVVDA-TPTSLKISWDAYYSSWQN--------VKYYRITYGETGGDSPVQ---EF-T----V---------PGYY 63 (103)
T ss_dssp CCCSCEEEEE-ETTEEEEECTTTTTTSCC--------CCEEEEEEEETTCSSCCE---EE-E----E---------ETTC
T ss_pred CCceeEEEec-CCCEEEEEccCCCCCCCc--------cceEEEEEEECCCCCccE---EE-E----c---------CCCc
Confidence 5777776532 368999999754311010 112256776543211110 00 0 0 0112
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPS 186 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~ 186 (569)
..++|+||+|+|.|.++|...+
T Consensus 64 ts~~l~~L~p~t~Y~~~V~A~~ 85 (103)
T 3t04_D 64 STATISGLKPGVDYTITVYAYD 85 (103)
T ss_dssp CEEEECSCCTTCCEEEEEEEES
T ss_pred CEEEeCCCCCCCEEEEEEEEEe
Confidence 4678999999999999997653
No 162
>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A
Probab=87.42 E-value=0.53 Score=38.73 Aligned_cols=28 Identities=18% Similarity=0.132 Sum_probs=20.4
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCccc
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSIPAMSG 192 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~ 192 (569)
-.+.|+||+|+|.|...|..-.....|+
T Consensus 59 ~s~~l~~L~PgT~Y~V~v~a~~~~~~S~ 86 (95)
T 2h41_A 59 TSVNIPDLLPGRKYIVNVYQISEDGEQS 86 (95)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTSCEE
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCCccc
Confidence 4678999999999999886533234443
No 163
>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=87.21 E-value=0.74 Score=39.44 Aligned_cols=38 Identities=21% Similarity=0.124 Sum_probs=30.1
Q ss_pred EEEEeCCCCCCCEEEEEEecCC---CCCccceeEEEcCCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRTMPDS 202 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~P~~ 202 (569)
..+.|+||+|+|.|.++|..-+ .+.+|+...|+|+...
T Consensus 75 ~~~~l~~L~p~T~Y~~~V~A~n~~G~Gp~S~~v~~~T~e~v 115 (120)
T 1ujt_A 75 RSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEES 115 (120)
T ss_dssp CEEEEESCCSSEEEEEEEEEESSSCCCCCCCCEEEEECSSC
T ss_pred CEEEECCCCCCCEEEEEEEEECCCccCCCCCCEEEECCCCC
Confidence 4678999999999999995433 2468888999998654
No 164
>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.70 E-value=0.24 Score=40.96 Aligned_cols=22 Identities=27% Similarity=0.311 Sum_probs=18.6
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPS 186 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~ 186 (569)
..++|+||+|+|.|.++|...+
T Consensus 61 ~~~~l~~L~p~t~Y~~~V~A~~ 82 (105)
T 2ekj_A 61 SHVTLPDLQAATKYRVLVSAIY 82 (105)
T ss_dssp SEEEECSCCSSCCCBCBBCBBC
T ss_pred CEEEeCCCCCCCEEEEEEEEEe
Confidence 4668999999999999997654
No 165
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=86.56 E-value=0.96 Score=48.59 Aligned_cols=96 Identities=17% Similarity=0.166 Sum_probs=56.1
Q ss_pred CCCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccC
Q 008343 83 GFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (569)
Q Consensus 83 ~~~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~ 162 (569)
+..|..|.+.- ..++++.|+|.......|. ...=.|+|........... .... + ...
T Consensus 387 P~PP~nl~v~~-~s~~sl~LsW~pP~~~~g~--------~l~YeV~Yr~~~~~~w~~~----~~~~------~----~~~ 443 (488)
T 2q7n_A 387 PHDPTSLKVKD-INSTVVTFSWYLPGNFTKI--------NLLCQIEICKANSKKEVRN----ATIR------G----AED 443 (488)
T ss_dssp CCCCEEEEEEE-CSTTCEEEEEEEEEECSSS--------EEEEEEEEBCTTSCCEEEE----EEEE------C----CEE
T ss_pred CCCCeEEEEEe-cCCCEEEEEEeCCCCCCCc--------ceEEEEEEEECCCCCceEE----EEEe------c----CCC
Confidence 44677777654 3478999999875422110 1123577766543221110 0000 0 001
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCC--C---CCccceeEEEcCCC
Q 008343 163 IIHHVRLTGLKPDTLYHYQCGDPS--I---PAMSGTYCFRTMPD 201 (569)
Q Consensus 163 ~~h~v~l~gL~P~T~Y~Yrvg~~~--~---~~~S~~~~F~T~P~ 201 (569)
-.+.+.|.+|+|+|.|..||.... . +.||+...|+|++.
T Consensus 444 ~~~~v~l~~L~P~T~Y~~rVRA~~~g~G~WS~WS~~v~~~T~e~ 487 (488)
T 2q7n_A 444 STYHVAVDKLNPYTAYTFRVRCSSKTFWKWSRWSDEKRHLTTEA 487 (488)
T ss_dssp EEEEEEECSCCSSCCBBCCEEEEESSCSSCCCCCCCCCBCCCCC
T ss_pred cEEEEEeCCCCCCceEEEEEEEEECCCCCCCCCcCCEeEECCCC
Confidence 246779999999999999985432 1 26788888999764
No 166
>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}
Probab=86.07 E-value=2.3 Score=39.54 Aligned_cols=77 Identities=16% Similarity=0.160 Sum_probs=42.4
Q ss_pred CCCCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCC-CCceEEEeEEEEeeeecccCCccccc
Q 008343 82 EGFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRS-QLNRKATGRSLVYSQLYPFLGLQNYT 160 (569)
Q Consensus 82 ~~~~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~-~~~~~~~g~~~~y~~~~p~~g~~~~~ 160 (569)
....|..+.+.....++++.|+|...... . ....-.|+|..... .....+.-.
T Consensus 109 kp~pP~~l~v~~~~~~~~l~l~W~~P~~~--~-------~~l~yev~y~~~~~~~~w~~~~~~----------------- 162 (206)
T 3v6o_A 109 KPLPPSSVKAEITINIGLLKISWEKPVFP--E-------NNLQFQIRYGLSGKEVQWKMYEVY----------------- 162 (206)
T ss_dssp CCCCCCSCEEEEETTTTEEEEEC-----------------CEEEEEEEEESSSSCCCEEEEEC-----------------
T ss_pred cCCCCCceEeEEecCCCeEEEEECCCCCC--C-------CcEEEEEEEEECCCCCceEEEecc-----------------
Confidence 34567878777665578999999864321 0 01234577766542 122211100
Q ss_pred cCeEEEEEeCCCCCCCEEEEEEec
Q 008343 161 SGIIHHVRLTGLKPDTLYHYQCGD 184 (569)
Q Consensus 161 ~~~~h~v~l~gL~P~T~Y~Yrvg~ 184 (569)
..-...+.|.+|+|+|.|..||..
T Consensus 163 ~~~~~~~~l~~L~p~t~Y~vqVRa 186 (206)
T 3v6o_A 163 DAKSKSVSLPVPDLCAVYAVQVRC 186 (206)
T ss_dssp C---CEEEECCSCTTSCEEEEEEE
T ss_pred cCcceeEEeecCCCCCEEEEEEEE
Confidence 001135789999999999999964
No 167
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=85.95 E-value=1.6 Score=40.02 Aligned_cols=33 Identities=15% Similarity=0.036 Sum_probs=22.8
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---CccceeEEE
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFR 197 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~ 197 (569)
..+.|++|+|+|.|.+||...+.. .+|+...++
T Consensus 165 ~~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~ 200 (209)
T 2vkw_A 165 DHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRT 200 (209)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEEC
T ss_pred cEEEecCCCCCCEEEEEEEEEeCCccCCcchhhhhh
Confidence 356799999999999999765433 344444443
No 168
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=85.57 E-value=2.5 Score=38.52 Aligned_cols=88 Identities=19% Similarity=0.262 Sum_probs=48.5
Q ss_pred CCCeEEEEe-cCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCC-ceEEEeEEEEeeeecccCCccccccC
Q 008343 85 EPEQISVSL-SSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQL-NRKATGRSLVYSQLYPFLGLQNYTSG 162 (569)
Q Consensus 85 ~P~qi~ls~-~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~-~~~~~g~~~~y~~~~p~~g~~~~~~~ 162 (569)
.|.++.++- +..++++.|+|.-.. +.. ...=.|+|....... .... .. .+
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~---~~~-------i~~Y~v~~~~~~~~~~~~~~-----~~-------------~~ 53 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQ---PSH-------ISKYILRWRPKNSVGRWKEA-----TI-------------PG 53 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCS---STT-------CCEEEEEEEETTCSSCCEEE-----EE-------------CT
T ss_pred CceeEEEEecCCCCCEEEEEEeCCC---CCC-------ceEEEEEEEECCCCCceEEE-----ec-------------CC
Confidence 367776543 233789999998642 111 122356776543211 1111 00 01
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCCCCccc--eeEEEcCC
Q 008343 163 IIHHVRLTGLKPDTLYHYQCGDPSIPAMSG--TYCFRTMP 200 (569)
Q Consensus 163 ~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~P 200 (569)
....+.|+||+|+|.|.+||...+..+.+. ...|+|..
T Consensus 54 ~~~~~~i~~L~p~t~Y~~~V~a~n~~G~~~~~~~~~~t~~ 93 (201)
T 2ha1_A 54 HLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTS 93 (201)
T ss_dssp TCCEEEECSCCTTEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred CccEEEecCCCCCCEEEEEEEEEecccccCceeEEEecCC
Confidence 123678999999999999997654333322 34566643
No 169
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=85.53 E-value=4.3 Score=36.93 Aligned_cols=90 Identities=7% Similarity=-0.037 Sum_probs=49.5
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcc--cccCCCCCCCCCCCccEEEEcccCCCC-ceEEEeEEEEeeeecccCCccccc
Q 008343 84 FEPEQISVSLSSAHDSVWISWITGEF--QIGNNLKPLDPKSVVSVVRYGTRRSQL-NRKATGRSLVYSQLYPFLGLQNYT 160 (569)
Q Consensus 84 ~~P~qi~ls~~~~p~s~~I~W~T~~~--~~g~~~~~~~p~~~~~~V~yg~~~~~~-~~~~~g~~~~y~~~~p~~g~~~~~ 160 (569)
..|..+.+.. ..++++.|+|..... ..|. ...=.|+|....... ..... . .
T Consensus 106 ~~P~~~~~~~-~~~~sv~l~W~~p~~~~~ng~--------i~~Y~v~~~~~~~~~~~~~~~----~-------------~ 159 (205)
T 1cfb_A 106 KNPDNVVGQG-TEPNNLVISWTPMPEIEHNAP--------NFHYYVSWKRDIPAAAWENNN----I-------------F 159 (205)
T ss_dssp CCCSCCEEEC-SSTTCEEEECCCCCGGGTCSS--------SCEEEEEEEESSTTCCCEEEE----E-------------C
T ss_pred CCCeeeEeec-CCCCeEEEEEECCCccccCCC--------ceEEEEEEEECCCCCCcEEEE----e-------------c
Confidence 3577776653 336899999986431 1110 112356666544332 11110 0 0
Q ss_pred cCeEEEEEeCCCCCCCEEEEEEecCCCC---C-ccceeEEEcC
Q 008343 161 SGIIHHVRLTGLKPDTLYHYQCGDPSIP---A-MSGTYCFRTM 199 (569)
Q Consensus 161 ~~~~h~v~l~gL~P~T~Y~Yrvg~~~~~---~-~S~~~~F~T~ 199 (569)
......+.|++|+|+|.|.+||...+.. . .|+...++|.
T Consensus 160 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~ 202 (205)
T 1cfb_A 160 DWRQNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSG 202 (205)
T ss_dssp CTTCCEEEECSCCSSCEEEEEEEEEETTEECSSCCCCEEEESS
T ss_pred CCCccEEEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEEecC
Confidence 0112456789999999999999654422 2 3555666664
No 170
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=85.45 E-value=3.8 Score=40.72 Aligned_cols=93 Identities=13% Similarity=-0.002 Sum_probs=53.7
Q ss_pred CCCCCeEEEEecC-CCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCcccccc
Q 008343 83 GFEPEQISVSLSS-AHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTS 161 (569)
Q Consensus 83 ~~~P~qi~ls~~~-~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~ 161 (569)
+..|..+.+.... +++++.|+|.-.....+.. + ...=.|+|.......+..+.- .
T Consensus 197 P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~-----~-~~~Y~V~yr~~~~~~W~~~~~-----------~------- 252 (325)
T 1n26_A 197 PDPPANITVTAVARNPRWLSVTWQDPHSWNSSF-----Y-RLRFELRYRAERSKTFTTWMV-----------K------- 252 (325)
T ss_dssp CCCCEEEEEEECTTCTTCEEEEEECCTTCCCSS-----S-CEEEEEEEEETTCSCCEEEEC-----------G-------
T ss_pred CCCCcceEEEEecCCCCEEEEEECCCCccCCCc-----E-eEEEEEEEEeCCCCCCEEEcc-----------c-------
Confidence 3468888777654 4689999998753210000 0 012357776654333322110 0
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecCCC------CCccceeEEEcC
Q 008343 162 GIIHHVRLTGLKPDTLYHYQCGDPSI------PAMSGTYCFRTM 199 (569)
Q Consensus 162 ~~~h~v~l~gL~P~T~Y~Yrvg~~~~------~~~S~~~~F~T~ 199 (569)
.....+.|.+|+|+|.|.+||...+. ..||+...++|.
T Consensus 253 ~~~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~~~~~~ 296 (325)
T 1n26_A 253 DLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTPW 296 (325)
T ss_dssp GGCSEEEESSCCTTCCEEEEEEEEETTTBSCCCCCCCCEEECCC
T ss_pred CCceEEEEeCCCCCCeEEEEEEEecCCCCCCCcCCCCccceecC
Confidence 01135678999999999999965431 256666666653
No 171
>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}
Probab=84.54 E-value=3.7 Score=39.03 Aligned_cols=33 Identities=15% Similarity=0.277 Sum_probs=21.6
Q ss_pred EEeCCCCCCCEEEEEEecCCCC---CccceeEEEcC
Q 008343 167 VRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTM 199 (569)
Q Consensus 167 v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~ 199 (569)
-+++||+|+|.|.|||..-+.. ...+...+||.
T Consensus 202 yt~~gLk~~TeYsF~V~A~d~~G~~Ss~e~vtVrTl 237 (238)
T 2w1n_A 202 YTFKKLNRHTIYNFKIAAKYSNGEVSSKESLTLRTA 237 (238)
T ss_dssp EEECSCCTTCEEEEEEEEEETTSCBCCCEEEEEECC
T ss_pred EEecCCCCCCEEEEEEEEEeCCCCccccCcEEEEec
Confidence 3679999999999999643211 12244556654
No 172
>3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A*
Probab=84.03 E-value=1.5 Score=46.25 Aligned_cols=74 Identities=19% Similarity=0.262 Sum_probs=43.2
Q ss_pred CCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCeE
Q 008343 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (569)
Q Consensus 85 ~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~~ 164 (569)
.|..|++.-.. ++|+.|+|.... +..+ ..=.|+|......... .+... .+-.
T Consensus 372 ~~~~l~~~~~~-~~s~~l~W~~p~---~~~~-------~~y~v~y~~~~~~~~~-------~~~~~----------~~~~ 423 (461)
T 3csg_A 372 VPTNLEVVAAT-PTSLLISWDASY---SSSV-------SYYRITYGETGGNSPV-------QEFTV----------PGSK 423 (461)
T ss_dssp SSCCCEEEEEC-SSCEEEECCCTT---GGGC-------SEEEEEEEETTCCSCC-------EEEEE----------ETTC
T ss_pred CCcceEEeccC-CCeEEEEecCCC---CCcc-------eEEEEEEEECCCCccc-------eEEEe----------cCCC
Confidence 57778776554 789999997541 1111 1235666554321100 01100 0112
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPS 186 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~ 186 (569)
.+|+|+||+|||+|..||..-.
T Consensus 424 ~~~~i~~L~p~t~Y~~~v~a~~ 445 (461)
T 3csg_A 424 STATISGLSPGVDYTITVYAYS 445 (461)
T ss_dssp CEEEECSCCTTCEEEEEEEEEC
T ss_pred ceEEecCCCCCCEEEEEEEEEe
Confidence 5789999999999999997544
No 173
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=83.86 E-value=3.1 Score=41.63 Aligned_cols=22 Identities=23% Similarity=0.356 Sum_probs=18.5
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPS 186 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~ 186 (569)
....|+||+|++.|.|+|...+
T Consensus 329 ~~~~~~~L~p~t~Y~~~V~A~~ 350 (368)
T 1fnf_A 329 STATISGLKPGVDYTITVYAVT 350 (368)
T ss_dssp CEEEECSCCTTCCEEEEEEEEC
T ss_pred eEEEecCCCCCCEEEEEEEEeC
Confidence 4568899999999999997654
No 174
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=83.68 E-value=3.8 Score=41.08 Aligned_cols=34 Identities=24% Similarity=0.075 Sum_probs=24.5
Q ss_pred EEEeCCCCCCCEEEEEEecCCCCCccc--eeEEEcC
Q 008343 166 HVRLTGLKPDTLYHYQCGDPSIPAMSG--TYCFRTM 199 (569)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~ 199 (569)
...|+||+|+|.|.+||...+..+.|+ .+.++|+
T Consensus 332 ~~~i~~L~p~t~Y~~~V~A~~~~G~s~p~s~~~~~~ 367 (375)
T 3t1w_A 332 SITLTNLTPGTEYVVSIVALNGREESPLLIGQQSTV 367 (375)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCceeeeeEEe
Confidence 568899999999999997655444443 4556654
No 175
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}
Probab=83.64 E-value=0.96 Score=48.50 Aligned_cols=96 Identities=17% Similarity=0.143 Sum_probs=56.0
Q ss_pred CCCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccC
Q 008343 83 GFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (569)
Q Consensus 83 ~~~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~ 162 (569)
+..|..+.+.. ..++++.|+|.......+ ....-.|+|....+..... .++ ..+. ..
T Consensus 382 P~PP~nl~v~~-~~stsl~LsW~~P~~~~~--------~~L~YeVrYr~~~~~~~~~------~vs----v~~~----~~ 438 (483)
T 3e0g_A 382 PHTPTSFKVKD-INSTAVKLSWHLPGNFAK--------INFLCEIEIKKSNSVQEQR------NVT----IQGV----EN 438 (483)
T ss_dssp CCCCEEEEECC-SSSSSCCEEEECCSCCTT--------SBCCCEEEEECSSSCCCEE------ECC----CBCC----SS
T ss_pred CCCCeeeEEEE-ecCCeEEEEECCCCCCCC--------ceEEEEEEEEECCCCCceE------EEE----Eecc----CC
Confidence 44577777653 246889999987532111 0123468887765432111 000 0110 01
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCCC-----CCccceeEEEcCCC
Q 008343 163 IIHHVRLTGLKPDTLYHYQCGDPSI-----PAMSGTYCFRTMPD 201 (569)
Q Consensus 163 ~~h~v~l~gL~P~T~Y~Yrvg~~~~-----~~~S~~~~F~T~P~ 201 (569)
-.+.+.|.+|+|+|+|..||..... +.||+...|+|+.+
T Consensus 439 ~~~s~~l~~L~PgT~Y~vrVRA~~~g~g~WSeWS~~~~f~T~E~ 482 (483)
T 3e0g_A 439 SSYLVALDKLNPYTLYTFRIRCSTETFWKWSKWSNKKQHLTTEA 482 (483)
T ss_dssp SBCCCCCCSCCSSSSCEEEEECCCSSCCCCCCCCCCCCCCCCCC
T ss_pred ceeEEEEeccCCCcEEEEEEEEeeCCCCCcCCCCCceeeECCCC
Confidence 1245678999999999999976532 35788888998653
No 176
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=83.52 E-value=1 Score=42.52 Aligned_cols=38 Identities=13% Similarity=0.195 Sum_probs=27.7
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---Cccc-eeEEEcCCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSIP---AMSG-TYCFRTMPDS 202 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~-~~~F~T~P~~ 202 (569)
..+.|+||+|+|.|.+||...+.. .+|. ...|+|.+..
T Consensus 160 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~~ 201 (234)
T 3f7q_A 160 RMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPKR 201 (234)
T ss_dssp CEEEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSCCC
T ss_pred eEEEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCCCC
Confidence 466899999999999999655432 3454 4678887654
No 177
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=82.93 E-value=3.1 Score=45.51 Aligned_cols=69 Identities=13% Similarity=0.159 Sum_probs=43.0
Q ss_pred CCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCeEEEEEeCCCCCCC
Q 008343 97 HDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGIIHHVRLTGLKPDT 176 (569)
Q Consensus 97 p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~~h~v~l~gL~P~T 176 (569)
.+++.++|.-....-|..+ ..=.|++....+..+..+. +.. .. ..+++||.||+
T Consensus 23 ~~sv~L~W~~P~~DGgs~I-------~~Y~vE~~~~~~~~W~~v~-~~~----------------~t--~~~V~~L~~g~ 76 (573)
T 3uto_A 23 DEAVILSWKPPALDGGSLV-------TNYTIEKREAMGGSWSPCA-KSR----------------YT--YTTIEGLRAGK 76 (573)
T ss_dssp SSCEEEEEECCSCCSSSCC-------CEEEEEEEESSSCCCEEEE-EES----------------SS--EEEECCCCTTC
T ss_pred CCEEEEEECCCCcCCCCcc-------cEEEEEEEECCCCceEEec-ccc----------------CC--EEEeCCCCCCC
Confidence 6899999986432111111 1236777777776666542 210 01 24679999999
Q ss_pred EEEEEEecCCCCCcc
Q 008343 177 LYHYQCGDPSIPAMS 191 (569)
Q Consensus 177 ~Y~Yrvg~~~~~~~S 191 (569)
.|.|||...+..++|
T Consensus 77 ~Y~FRV~A~N~~G~s 91 (573)
T 3uto_A 77 QYEFRIIAENKHGQS 91 (573)
T ss_dssp EEEEEEEEEETTEEC
T ss_pred cEeEEEEEEcCceEc
Confidence 999999876644444
No 178
>3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens}
Probab=81.97 E-value=4.9 Score=37.76 Aligned_cols=102 Identities=15% Similarity=0.149 Sum_probs=54.6
Q ss_pred CCCCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCcccccc
Q 008343 82 EGFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTS 161 (569)
Q Consensus 82 ~~~~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~ 161 (569)
....|..+.+.. .+.+.|+|......... ..+ .....-.|+|....+.-.....+.. .. ..
T Consensus 100 kp~PP~nltv~~---~~~l~lsW~~P~~~p~~--~~~-~~~L~Yevryr~~~~~W~~~~~~~~--~~-----------~~ 160 (219)
T 3tgx_A 100 KPAPPFDVTVTF---SGQYQISWRSDYEDPAF--YML-KGKLQYELQYRNRGDPWAVSPRRKL--IS-----------VD 160 (219)
T ss_dssp CCCCCEEEEEEE---SSSEEEEEECGGGSGGG--GGG-TTSEEEEEEEEETTSCTTSCCEEEE--EC-----------SS
T ss_pred EeCCCCceEEEe---CCCEEEEEeCCcCCccc--ccc-ccCEEEEEEEecCCCCceeccccee--Ee-----------cC
Confidence 344577777763 36899999975321000 000 0012345777665432111000110 00 01
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecCCC------C---CccceeEEEcCCCC
Q 008343 162 GIIHHVRLTGLKPDTLYHYQCGDPSI------P---AMSGTYCFRTMPDS 202 (569)
Q Consensus 162 ~~~h~v~l~gL~P~T~Y~Yrvg~~~~------~---~~S~~~~F~T~P~~ 202 (569)
+....+.+.+|+|+|.|..||..... + .||+...|+|.+..
T Consensus 161 ~~~~~~~~~~L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~~~ 210 (219)
T 3tgx_A 161 SRSVSLLPLEFRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSEE 210 (219)
T ss_dssp CSEEEECTTSSCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC--
T ss_pred CCEEEEEeccCCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCchh
Confidence 23456678899999999999953211 2 56888999998753
No 179
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=81.28 E-value=10 Score=37.40 Aligned_cols=36 Identities=22% Similarity=0.373 Sum_probs=28.1
Q ss_pred EEEeCCCCCCCEEEEEEecCC-----CCCccceeEEEcCCC
Q 008343 166 HVRLTGLKPDTLYHYQCGDPS-----IPAMSGTYCFRTMPD 201 (569)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~-----~~~~S~~~~F~T~P~ 201 (569)
.++|++|+|+|.|..+|..-. .+.+|+...++|...
T Consensus 160 ~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~~ 200 (306)
T 3s98_A 160 RHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVE 200 (306)
T ss_dssp EEEECSCCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCSC
T ss_pred eEEEccCCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecCC
Confidence 568999999999999996432 246888888888643
No 180
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=81.27 E-value=6.1 Score=43.87 Aligned_cols=34 Identities=21% Similarity=0.473 Sum_probs=23.7
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC----CccceeEEEcC
Q 008343 166 HVRLTGLKPDTLYHYQCGDPSIP----AMSGTYCFRTM 199 (569)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~~----~~S~~~~F~T~ 199 (569)
.++|++|+|+|.|.|||...+.. ..+....|+|.
T Consensus 224 ~~~i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t~ 261 (680)
T 1zlg_A 224 RVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSS 261 (680)
T ss_pred eEEeCCCCCCCEEEEEEEEEeCCCCCCCCCCccceEcC
Confidence 46789999999999999654422 23344566764
No 181
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=81.00 E-value=1.2 Score=40.93 Aligned_cols=39 Identities=28% Similarity=0.375 Sum_probs=28.8
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPDSS 203 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~~g 203 (569)
....|.+|+|++.|.|||...+. ..+|....|+|.|..+
T Consensus 173 ~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p~~g 214 (215)
T 3mtr_A 173 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVQG 214 (215)
T ss_dssp TEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC---
T ss_pred ccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEeccccC
Confidence 35678999999999999965442 3567788999988654
No 182
>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A
Probab=80.94 E-value=3.4 Score=39.37 Aligned_cols=35 Identities=17% Similarity=0.133 Sum_probs=26.2
Q ss_pred EEEEeCCCCCCCEEEEEEecCC-----CCCccceeEEEcC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPS-----IPAMSGTYCFRTM 199 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~-----~~~~S~~~~F~T~ 199 (569)
..+.|.+|+|||+|..||.... -+.||+...|+|+
T Consensus 195 ~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p 234 (236)
T 1axi_B 195 TSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 234 (236)
T ss_dssp SEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred CEEEEeccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECC
Confidence 4568889999999999996432 2367777788764
No 183
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=80.85 E-value=15 Score=35.06 Aligned_cols=36 Identities=6% Similarity=-0.143 Sum_probs=23.7
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCC--ccceeEEEcCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSIPA--MSGTYCFRTMP 200 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~~--~S~~~~F~T~P 200 (569)
....+++|+|+|.|.+||...+..+ .+.....+|..
T Consensus 157 ~~~~~~~L~p~t~Y~~~V~A~n~~g~g~~~~~~~~t~~ 194 (290)
T 3l5i_A 157 RTYLRGNLAESKCYLITVTPVYADGPGSPESIKAYLKQ 194 (290)
T ss_dssp EEECCSCCCTTCEEEEEEEEEETTEECCCEEEEEESSC
T ss_pred ceEEecCcCCccEEEEEEEEEeCCcccccEEEEeEccc
Confidence 4567899999999999997554322 23334444553
No 184
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=80.01 E-value=6.7 Score=35.72 Aligned_cols=23 Identities=22% Similarity=0.313 Sum_probs=19.3
Q ss_pred eEEEEEeCCCCCCCEEEEEEecC
Q 008343 163 IIHHVRLTGLKPDTLYHYQCGDP 185 (569)
Q Consensus 163 ~~h~v~l~gL~P~T~Y~Yrvg~~ 185 (569)
-...+.|++|+|+|.|.|||...
T Consensus 68 ~~~~~~i~~L~p~t~Y~~~V~A~ 90 (214)
T 2ibg_A 68 KSFTASVTDLKPQHTYRFRILAV 90 (214)
T ss_dssp EEEEEEECSCCTTCEEEEEEEEE
T ss_pred cceeEEecCCcCCCEEEEEEEEE
Confidence 34567899999999999999754
No 185
>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1
Probab=78.57 E-value=8.5 Score=36.99 Aligned_cols=89 Identities=12% Similarity=0.213 Sum_probs=52.0
Q ss_pred CCCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccC
Q 008343 83 GFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (569)
Q Consensus 83 ~~~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~ 162 (569)
...|..|.+.... ...+.|+|....+. ..-.-.|+|....+..+..+...
T Consensus 137 P~PP~nl~v~~~~-~~~l~l~W~~P~~~----------~~L~Yevry~~~~~~~W~~~~~~------------------- 186 (247)
T 2erj_C 137 PWAPENLTLHKLS-ESQLELNWNNRFLN----------HCLEHLVQYRTDWDHSWTEQSVD------------------- 186 (247)
T ss_dssp CCCCEEEEEEESS-SSCEEEEEECSSCC----------TTEEEEEEEECSSCSSCEEEEEC-------------------
T ss_pred eCCCCeEEEEECC-CCcEEEEECCCCCC----------CcEEEEEEEeeCCCCCCEEEecC-------------------
Confidence 4457777776543 36889999874310 01123577876555444332100
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCC------C---CCccceeEEEcCCC
Q 008343 163 IIHHVRLTGLKPDTLYHYQCGDPS------I---PAMSGTYCFRTMPD 201 (569)
Q Consensus 163 ~~h~v~l~gL~P~T~Y~Yrvg~~~------~---~~~S~~~~F~T~P~ 201 (569)
......|.+|+|++.|..||.... . ..||+...|.|.+.
T Consensus 187 ~~~~~~l~~L~p~~~Y~vqVR~k~~~~~~~~g~WSeWS~~~~~~t~~~ 234 (247)
T 2erj_C 187 YRHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSNTS 234 (247)
T ss_dssp SSCEEEESCCCTTSCEEEEEEEEECSSSCCCCCCCCCCCCEEECC---
T ss_pred CceEEEecCCCCCCEEEEEEEEEeCCCCCCCCccCCCCcCEEEECCCC
Confidence 013557799999999999996432 1 25777788888654
No 186
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=78.08 E-value=5.6 Score=43.08 Aligned_cols=38 Identities=13% Similarity=0.113 Sum_probs=28.4
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC------CccceeEEEcCCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSIP------AMSGTYCFRTMPDS 202 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~------~~S~~~~F~T~P~~ 202 (569)
..++|++|+|+|.|.+||...+.. ..+....++|.+.+
T Consensus 400 ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~~ 443 (536)
T 3fl7_A 400 TSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTE 443 (536)
T ss_dssp SEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEECCSCC
T ss_pred ceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEEeecccC
Confidence 567899999999999999655422 24567788887654
No 187
>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C*
Probab=77.89 E-value=8.1 Score=35.43 Aligned_cols=87 Identities=13% Similarity=0.213 Sum_probs=51.7
Q ss_pred CCCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccC
Q 008343 83 GFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (569)
Q Consensus 83 ~~~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~ 162 (569)
...|..|++.... ...+.|+|...... ..-.-.|+|....+..+..+...
T Consensus 99 P~pP~~l~~~~~~-~~~l~l~W~~p~~~----------~~l~yev~y~~~~~~~w~~~~~~------------------- 148 (199)
T 2b5i_C 99 PWAPENLTLHKLS-ESQLELNWNNRFLN----------HCLEHLVQYRTDWDHSWTEQSVD------------------- 148 (199)
T ss_dssp CCCCEEEEEEEEE-TTEEEEEEECSSCS----------TTCEEEEEEEETTCSSCEEEEEC-------------------
T ss_pred cCCCcEEEEEECC-CCCEEEEECCCCCC----------CceEEEEEEeecCCcccEEEecc-------------------
Confidence 4567888777654 36899999975310 11234688877655444332100
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCC------CC---CccceeEEEcC
Q 008343 163 IIHHVRLTGLKPDTLYHYQCGDPS------IP---AMSGTYCFRTM 199 (569)
Q Consensus 163 ~~h~v~l~gL~P~T~Y~Yrvg~~~------~~---~~S~~~~F~T~ 199 (569)
......|.+|+|++.|..||.... .+ .||+...|.|.
T Consensus 149 ~~~~~~l~~l~p~~~Y~vqVR~~~~~~~~~~g~WSeWS~~~~~~t~ 194 (199)
T 2b5i_C 149 YRHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSN 194 (199)
T ss_dssp SSCEEEECSCCTTSCEEEEEEEECCSSSCCCCCCCCCCCCEEC---
T ss_pred CceEEEecCCCCCcEEEEEEEEeccCCcCcCCeECCCCCCEEecCC
Confidence 113557899999999999996443 12 45666667663
No 188
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=77.12 E-value=1.9 Score=46.42 Aligned_cols=97 Identities=16% Similarity=0.121 Sum_probs=54.0
Q ss_pred CCCCCeEEEEe-cCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCcccccc
Q 008343 83 GFEPEQISVSL-SSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTS 161 (569)
Q Consensus 83 ~~~P~qi~ls~-~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~ 161 (569)
...|..+.+.. ...++++.|+|.......|. ...=.|+|....+..+..+ .... ..
T Consensus 199 p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~--------~~~Y~v~~~~~~~~~w~~~-----------~~~~----~~ 255 (589)
T 3l5h_A 199 PNPPHNLSVINSEELSSILKLTWTNPSIKSVI--------ILKYNIQYRTKDASTWSQI-----------PPED----TA 255 (589)
T ss_dssp CCCCCSCEEECTTTCTTCEEEECCCCGGGGTS--------CEEEEEEEEETTCSCCBCC-----------CTTS----SC
T ss_pred cCCCceEEEEecCCCCCeEEEEeCCCCCCCee--------eEEEEEEECCCCCCCcEEE-----------cccc----Cc
Confidence 44677777753 34568899999764321110 0122455555432221110 0000 01
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecCCC------CCccceeEEEcCCCC
Q 008343 162 GIIHHVRLTGLKPDTLYHYQCGDPSI------PAMSGTYCFRTMPDS 202 (569)
Q Consensus 162 ~~~h~v~l~gL~P~T~Y~Yrvg~~~~------~~~S~~~~F~T~P~~ 202 (569)
+....+.|++|+|+|.|.+||...+. ..||+...|+|.+..
T Consensus 256 ~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~~ 302 (589)
T 3l5h_A 256 STRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDR 302 (589)
T ss_dssp SCCSEEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCCC
T ss_pred CceeEEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCccC
Confidence 12346689999999999999965321 245778888887643
No 189
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=76.42 E-value=6 Score=38.90 Aligned_cols=103 Identities=13% Similarity=0.123 Sum_probs=51.7
Q ss_pred CCCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccC
Q 008343 83 GFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSG 162 (569)
Q Consensus 83 ~~~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~ 162 (569)
...|..+++... .+++.|+|.......+ ....=.|+|....+..+....-....-.. ....+ ...
T Consensus 200 P~pP~~l~~~~~--~~~l~lsW~~P~~~~~--------~~l~Yev~y~~~~~~~w~~~~~~~~~c~~-~~~~~----~~~ 264 (314)
T 3bpo_C 200 PDPPHIKNLSFH--NDDLYVQWENPQNFIS--------RCLFYEVEVNNSQTETHNVFYVQEAKCEN-PEFER----NVE 264 (314)
T ss_dssp CCCCEEEEEEEE--TTEEEEEEECCTTCCG--------GGEEEEEEEEC--CCCEEEEEESCCCCCC-TTSSC----CCS
T ss_pred eCCCCEEEEEEc--CCcEEEEEeCCCccCC--------ceEEEEEEEEECCCCcceEEecccccccc-ccccc----ccC
Confidence 345787877633 4799999987532100 00123567765443322110000000000 00000 012
Q ss_pred eEEEEEeCCCCCCCEEEEEEecCC-------C---CCccceeEEEcCC
Q 008343 163 IIHHVRLTGLKPDTLYHYQCGDPS-------I---PAMSGTYCFRTMP 200 (569)
Q Consensus 163 ~~h~v~l~gL~P~T~Y~Yrvg~~~-------~---~~~S~~~~F~T~P 200 (569)
....+.|.+|+|+|.|.+||.... . ..||+...|.+.+
T Consensus 265 ~~~~~~l~~L~p~t~Y~~qVra~~~~~~~~~~g~WS~WS~~~~~~~~~ 312 (314)
T 3bpo_C 265 NTSCFMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIGKKR 312 (314)
T ss_dssp SEEEEEEESCCTTSCEEEEEEEEECTTTSCCCCCCCCCCCCEEESCCC
T ss_pred CceEEEEccCCCCCEEEEEEEeeecccccCCCCeeCCCCCCeEecccC
Confidence 346778999999999999996432 1 2566667776543
No 190
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=75.04 E-value=12 Score=41.54 Aligned_cols=99 Identities=15% Similarity=0.037 Sum_probs=54.5
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008343 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (569)
Q Consensus 84 ~~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~ 163 (569)
..|..+.+.-. +++++.|+|.-.....+.. ....-.|+|....+......... . .. ..+.
T Consensus 361 ~~P~~~~~~~~-~~~sv~l~W~~p~~~~~~~------~~~~y~v~y~~~~~~~~~~~~~~--~--~~---------~~~~ 420 (731)
T 2v5y_A 361 RGPRKLEVVEV-KSRQITIRWEPFGYNVTRC------HSYNLTVHYCYQVGGQEQVREEV--S--WD---------TENS 420 (731)
T ss_dssp CCCEEEEEEEE-CSSCEEEEEECCCHHHHCS------SSCEEEEEEEEESSSSEEEEEEE--E--CC---------SSCS
T ss_pred CCCceeEEEec-cCCeEEEEEECCCcccccc------eeeeEEEEEEEccCCCCccceeE--E--EE---------ecCC
Confidence 45777765533 3689999998643211100 00123577765543221111000 0 00 0112
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCC--CccceeEEEcCCCC
Q 008343 164 IHHVRLTGLKPDTLYHYQCGDPSIP--AMSGTYCFRTMPDS 202 (569)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~~--~~S~~~~F~T~P~~ 202 (569)
...+.|++|+|+|.|.+||...+.. ..|....++|....
T Consensus 421 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~S~~~~~~T~~~~ 461 (731)
T 2v5y_A 421 HPQHTITNLSPYTNVSVKLILMNPEGRKESQELIVQTDEDL 461 (731)
T ss_dssp SCEEEECSCCSSCEEEEEEEEECSSCEEECCCEEEECCCCC
T ss_pred cceEEECCCCCCCEEEEEEEEEcCCCCCCCceEEEEccCCC
Confidence 2456899999999999999754432 34777888887543
No 191
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=74.05 E-value=2.5 Score=40.08 Aligned_cols=36 Identities=19% Similarity=0.343 Sum_probs=25.6
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC---CccceeEEEcCCC
Q 008343 166 HVRLTGLKPDTLYHYQCGDPSIP---AMSGTYCFRTMPD 201 (569)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~P~ 201 (569)
..++++|+|+|.|.|||...+.. .+|....++|.+.
T Consensus 47 ~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~~ 85 (232)
T 4go6_B 47 QLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLP 85 (232)
T ss_dssp --CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCCT
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecCC
Confidence 35678999999999999765432 4566777777543
No 192
>1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B*
Probab=73.82 E-value=12 Score=34.50 Aligned_cols=100 Identities=12% Similarity=0.076 Sum_probs=47.9
Q ss_pred CCCCCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccc
Q 008343 81 VEGFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYT 160 (569)
Q Consensus 81 ~~~~~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~ 160 (569)
+....|..+.+.... .....|+|...... .. .. ...-.-.|+|....+.-... ... . . .
T Consensus 96 Vkp~PP~nl~~~~~~-~~~l~l~W~~p~~~-~~-~~---~~~L~yev~y~~~~~~~~~~-~~~--~---~---------~ 154 (207)
T 1iar_B 96 VKPRAPGNLTVHTNV-SDTLLLTWSNPYPP-DN-YL---YNHLTYAVNIWSENDPADFR-IYN--V---T---------Y 154 (207)
T ss_dssp BCCCCCEEEEEC-----CCEEEEEECSSCT-TS-TT---GGGCEEEEEEEESSSCSCEE-EEE--E---C---------S
T ss_pred cccCCCCCeEEEEcc-CCCEEEEECCCCCc-cc-cc---cccEEEEEEEccCCCchhhe-eee--e---e---------c
Confidence 334568888877432 45899999875321 00 00 00123467777654422111 100 0 0 0
Q ss_pred cCeEEEEEeCCCCCCCEEEEEEecCCC------CCccceeEEEcCCC
Q 008343 161 SGIIHHVRLTGLKPDTLYHYQCGDPSI------PAMSGTYCFRTMPD 201 (569)
Q Consensus 161 ~~~~h~v~l~gL~P~T~Y~Yrvg~~~~------~~~S~~~~F~T~P~ 201 (569)
.+....+.+.+|.||+.|..||..... ..||+...|+|.++
T Consensus 155 ~~~~~~~~~~~L~p~~~Y~vqVR~k~~~~~G~WSeWS~~~~~~t~~~ 201 (207)
T 1iar_B 155 LEPSLRIAASTLKSGISYRARVRAWAQAYNTTWSEWSPSTKWHNSYR 201 (207)
T ss_dssp SCCEEEECC-----CCCEEEEEEEECGGGTCCCCCCCCCEEEC----
T ss_pred CCcEEEEEHHHCCCCCEEEEEEEEecCCCCCCCCCCCcCeEEECCCC
Confidence 123455667799999999999965421 26777899999765
No 193
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=73.53 E-value=20 Score=35.55 Aligned_cols=37 Identities=27% Similarity=0.342 Sum_probs=28.3
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMPD 201 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~P~ 201 (569)
....|.+|+|++.|.|+|...+. ..+|....|+|.+.
T Consensus 252 ~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~ 291 (389)
T 2jll_A 252 TMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPV 291 (389)
T ss_dssp SEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred ceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCC
Confidence 45678999999999999965432 24567788988765
No 194
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=72.70 E-value=18 Score=40.01 Aligned_cols=39 Identities=21% Similarity=0.204 Sum_probs=28.6
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC--CCccceeEEEcCCCC
Q 008343 164 IHHVRLTGLKPDTLYHYQCGDPSI--PAMSGTYCFRTMPDS 202 (569)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~--~~~S~~~~F~T~P~~ 202 (569)
...++|+||+|+|.|.++|...+. .+.+....|+|.+..
T Consensus 593 ~~~~~l~~L~p~t~Y~~~V~A~n~~G~G~~~~~~~~T~~~~ 633 (680)
T 1zlg_A 593 HYVLTVPNLRPSTLYRLEVQVLTPGGEGPATIKTFRTPELP 633 (680)
T ss_pred ccEEEecCCCCCceEEEEEEEEcCCCcCCCcceEEECCCCC
Confidence 467899999999999999965422 122366788887654
No 195
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=70.73 E-value=21 Score=36.57 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=26.9
Q ss_pred EEEeCCCCCCCEEEEEEecCC-----CCCccceeEEEcCC
Q 008343 166 HVRLTGLKPDTLYHYQCGDPS-----IPAMSGTYCFRTMP 200 (569)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~-----~~~~S~~~~F~T~P 200 (569)
.++|++|+|+|.|..||..-+ .+.+|+...++|..
T Consensus 164 ~~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~ 203 (414)
T 3se4_A 164 RHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTV 203 (414)
T ss_dssp EEEECCCCTTCEEEEEEEEECTTTCCEEEECCCEEEECCS
T ss_pred EEEEcCCCCCCeEEEEEEEEeccCCCCCccCccccccccc
Confidence 467999999999999997543 12567777888864
No 196
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=69.91 E-value=7.5 Score=41.13 Aligned_cols=92 Identities=5% Similarity=0.152 Sum_probs=52.2
Q ss_pred CCeEEEEEcccCCCCCh------HHHHHHHHhC-CCCEEEEcCCccccccc-ccCCCCCccccccCCC-CCCccchhHHH
Q 008343 207 YPSRIAIVGDVGLTYNT------TSTVSHMISN-RPDLILLVGDVTYANLY-LTNGTGSDCYACSFAN-SPIHETYQPRW 277 (569)
Q Consensus 207 ~~~rfavigD~g~~~~~------~~~~~~l~~~-~pDfvl~~GDl~Y~d~~-~~~G~~~~~~~~~~~~-~~~~e~Y~~~w 277 (569)
.++++++.+....+.+. ...++.+.+. +||.+|++|.+++.... ...|.. -.+++ .+...+|+..+
T Consensus 146 ~~l~ivvAsGPyT~sdnl~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~-----p~~~~~~~~~~t~~~lF 220 (460)
T 3flo_A 146 SSLKVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKL-----PNFPQFKTQPKTLDELF 220 (460)
T ss_dssp SCEEEEEEESCCSCSSCCCCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCC-----CCCTTCSSCCSSHHHHH
T ss_pred CCcEEEEEeCCccCCCccChHHHHHHHHHHHhccCCCEEEEecCcccccCcccccCcc-----cccccccccccCHHHHH
Confidence 47899998887655431 2344555554 79999999999976411 011220 01111 11133444333
Q ss_pred HHH-HHhhhhhhccCCcEEecCCcccc
Q 008343 278 DYW-GRYMQPVLSKVPIMVVEGNHEYE 303 (569)
Q Consensus 278 d~~-~~~l~~l~~~~P~~~v~GNHD~~ 303 (569)
... ...++.+...+-++.+||+||..
T Consensus 221 ~~~i~~il~~l~~~t~VVlVPS~rD~~ 247 (460)
T 3flo_A 221 LKLFTPILKTISPHIQTVLIPSTKDAI 247 (460)
T ss_dssp HHHTHHHHTTSCTTSEEEEECCTTBTT
T ss_pred HHHHHHHHHhccCCCEEEEeCCccccc
Confidence 332 22344454567799999999985
No 197
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=68.39 E-value=33 Score=35.15 Aligned_cols=113 Identities=16% Similarity=0.182 Sum_probs=58.1
Q ss_pred CCCCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCcccccc
Q 008343 82 EGFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTS 161 (569)
Q Consensus 82 ~~~~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~ 161 (569)
....|..|.+...+ +.+.|+|....... ....+.-....=.|+|.... ..+..+... . ..
T Consensus 108 ~p~pP~~l~v~~~~--~~~~l~W~~p~~~~--~~~~~~~~~l~Y~v~yr~~~-~~w~~~~~~----~-----------~~ 167 (419)
T 2gys_A 108 QPPEPRDLQISTDQ--DHFLLTWSVALGSP--QSHWLSPGDLEFEVVYKRLQ-DSWEDAAIL----L-----------SN 167 (419)
T ss_dssp CCCCCEEEEEEEET--TEEEEEEECCC-------CCSCGGGEEEEEEEEETT-SCSTTCEEE----E-----------ES
T ss_pred cCCCCCceEEEecC--CeEEEEECCCcccc--ccchhccCceEEEEEEccCC-CChhheeee----c-----------cc
Confidence 34568889887665 59999998754310 00000000012346665543 211111000 0 00
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecCCC---------CCccceeEEEcCCCCCCCCCCeEEEEEcc
Q 008343 162 GIIHHVRLTGLKPDTLYHYQCGDPSI---------PAMSGTYCFRTMPDSSSTSYPSRIAIVGD 216 (569)
Q Consensus 162 ~~~h~v~l~gL~P~T~Y~Yrvg~~~~---------~~~S~~~~F~T~P~~g~~~~~~rfavigD 216 (569)
...+.+.+.+|.|++.|..||..... ..||+...|+|.+.... .+..+-.+.+
T Consensus 168 ~~~~~~~~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~~~--~p~~l~c~~~ 229 (419)
T 2gys_A 168 TSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGDEA--QPQNLECFFD 229 (419)
T ss_dssp SSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCCTT--SCEEEEEEEC
T ss_pred ceEEEechhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccccC--CCceEEEEEC
Confidence 11233334499999999999864321 24678899999876522 2445544433
No 198
>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=64.30 E-value=7.6 Score=36.59 Aligned_cols=38 Identities=34% Similarity=0.443 Sum_probs=29.7
Q ss_pred EEEEeCCCCCCCEEEEEEecC-----CCCCccceeEEEcCCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDP-----SIPAMSGTYCFRTMPDS 202 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~-----~~~~~S~~~~F~T~P~~ 202 (569)
+.++|.+|+|+|.|..+|... ..+.+|+...|+|.+..
T Consensus 173 ~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~d~ 215 (221)
T 4doh_R 173 HTLVLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCARTLKDQ 215 (221)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEEEECCCC-
T ss_pred cEEEEecCCCCCcEEEEEEEEEcCCCCCCCCCCCEeEecCCCc
Confidence 367899999999999999643 23478999999997653
No 199
>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}
Probab=60.03 E-value=7.4 Score=35.84 Aligned_cols=36 Identities=28% Similarity=0.205 Sum_probs=28.8
Q ss_pred EEEeCCCCCCCEEEEEEecCC-----CCCccceeEEEcCCC
Q 008343 166 HVRLTGLKPDTLYHYQCGDPS-----IPAMSGTYCFRTMPD 201 (569)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~-----~~~~S~~~~F~T~P~ 201 (569)
.++|.+|+|+|.|..+|..-. .+.+|+...|+|.+.
T Consensus 156 ~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~~ 196 (201)
T 3lqm_A 156 FEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTHD 196 (201)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTTTEECCCCCCEEEECCCG
T ss_pred eEEEecCCCCCcEEEEEEEEeccCCCCCCcCCCEeEEeCCC
Confidence 478999999999999986432 247888899999764
No 200
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=59.05 E-value=7.5 Score=35.15 Aligned_cols=28 Identities=18% Similarity=0.132 Sum_probs=21.3
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCccc
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSIPAMSG 192 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~ 192 (569)
..+.|+||+|+|.|.++|...+..+.+.
T Consensus 165 ~~~~i~~L~p~t~Y~~~V~A~~~~G~~~ 192 (201)
T 2ha1_A 165 TSVNIPDLLPGRKYIVNVYQISEDGEQS 192 (201)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTSCEE
T ss_pred eEEEeCCCCCCCEEEEEEEEEcCCCCcc
Confidence 4678999999999999997655334443
No 201
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=55.61 E-value=28 Score=33.16 Aligned_cols=21 Identities=14% Similarity=0.194 Sum_probs=18.0
Q ss_pred EEEeCCCCCCCEEEEEEecCC
Q 008343 166 HVRLTGLKPDTLYHYQCGDPS 186 (569)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~ 186 (569)
...|.+|+|++.|.|||...+
T Consensus 255 ~~~i~~l~~~~~y~~~~~A~N 275 (305)
T 2nzi_A 255 RYTVINLFGKTSYQFRVIAEN 275 (305)
T ss_dssp EEEECSCCSSCEEEEEEEEEE
T ss_pred eEEecCCCCCCeEEEEEEEEe
Confidence 467899999999999997654
No 202
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=53.97 E-value=6.4 Score=45.38 Aligned_cols=39 Identities=23% Similarity=0.127 Sum_probs=30.0
Q ss_pred EEEEeCCCCCCCEEEEEEec-CC---C----CCccceeEEEcCCCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGD-PS---I----PAMSGTYCFRTMPDSS 203 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~-~~---~----~~~S~~~~F~T~P~~g 203 (569)
..+.|++|+|+|.|.|||.. -+ . ..+|+...|+|.+...
T Consensus 549 ~~~~l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~~P 595 (897)
T 2dtg_E 549 PGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATNP 595 (897)
T ss_dssp CEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCCCC
T ss_pred cceEeCCCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCCCCC
Confidence 45789999999999999987 22 1 3578888899976543
No 203
>1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=53.30 E-value=8.9 Score=30.32 Aligned_cols=35 Identities=23% Similarity=0.266 Sum_probs=23.5
Q ss_pred EEEeCCCCCCCEEEEEEecCCCCCcc--ceeEEEcCC
Q 008343 166 HVRLTGLKPDTLYHYQCGDPSIPAMS--GTYCFRTMP 200 (569)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S--~~~~F~T~P 200 (569)
.-+|+||+||++|.=|+.+--..+-+ ..+.|+|.-
T Consensus 39 SYtIsGLkPGvtYegQLisV~r~g~~EvtrfdfTT~~ 75 (89)
T 1q38_A 39 SYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTS 75 (89)
T ss_dssp CCCCCCCCTTCCEEEEEEEECTTSCCCEEEEEECSSS
T ss_pred eEEEeccCCCcEEEEEEEeeeecccCCceEEEEEecc
Confidence 33689999999999988653323334 356676643
No 204
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=52.03 E-value=62 Score=35.66 Aligned_cols=38 Identities=18% Similarity=0.090 Sum_probs=27.9
Q ss_pred EEEEeCCCCCCCEEEEEEecC--CC---CCccceeEEEcCCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDP--SI---PAMSGTYCFRTMPDS 202 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~--~~---~~~S~~~~F~T~P~~ 202 (569)
...+|.+|+|++.|.|||... +. ..+|....++|.+..
T Consensus 316 ~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~~ 358 (731)
T 2v5y_A 316 TSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCAD 358 (731)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEECCCCC
T ss_pred ceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEeeecCCC
Confidence 356789999999999999644 32 245667788887643
No 205
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=49.32 E-value=22 Score=32.20 Aligned_cols=34 Identities=6% Similarity=-0.191 Sum_probs=23.6
Q ss_pred EEEEeCCC-CCCCEEEEEEecCCCCCc--cceeEEEc
Q 008343 165 HHVRLTGL-KPDTLYHYQCGDPSIPAM--SGTYCFRT 198 (569)
Q Consensus 165 h~v~l~gL-~P~T~Y~Yrvg~~~~~~~--S~~~~F~T 198 (569)
..+.|++| +|++.|.+||...+..+. |....|.+
T Consensus 62 ~~~~i~~L~~~~t~Y~~~V~A~n~~G~~~s~~~~~~~ 98 (215)
T 1bqu_A 62 TSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDP 98 (215)
T ss_dssp TEEECSSCCCTTSCEEEEEEEEETTEEEECCCEEECG
T ss_pred ceEEEcCCccccccEEEEEEEEecccCccCCcEEecc
Confidence 46789999 999999999976543222 33455544
No 206
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=48.80 E-value=20 Score=36.05 Aligned_cols=17 Identities=18% Similarity=0.122 Sum_probs=14.3
Q ss_pred CCCCCCCEEEEEEecCC
Q 008343 170 TGLKPDTLYHYQCGDPS 186 (569)
Q Consensus 170 ~gL~P~T~Y~Yrvg~~~ 186 (569)
++|.+||+|||.|...+
T Consensus 76 t~~~~GttYyYwVk~~~ 92 (344)
T 3b4n_A 76 ADTNSGLNYWYWVDVVS 92 (344)
T ss_dssp CCCCTTCCCEEEEEEEE
T ss_pred cCcCCCcEEEEEEEEec
Confidence 79999999999986543
No 207
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=44.18 E-value=8.6 Score=39.67 Aligned_cols=34 Identities=24% Similarity=0.293 Sum_probs=24.8
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC-----C---CccceeEEEc
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSI-----P---AMSGTYCFRT 198 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~-----~---~~S~~~~F~T 198 (569)
..+.|.+|+|+|.|.+||..... + .||+...|+|
T Consensus 377 ~~~~l~~L~p~t~Y~~qVRa~~~~g~~~G~wS~WS~~~~~~t 418 (419)
T 2gys_A 377 HSMALPALEPSTRYWARVRVRTSRTGYNGIWSEWSEARSWDT 418 (419)
T ss_dssp SEEECCCCCSSCCCEEEEEEEECCTTCCBCCCCCCCCEECCC
T ss_pred cEEEeccCCCCCeEEEEEEEEEcCCCCCCccCCCCCCeEeeC
Confidence 36789999999999999864321 1 5666777765
No 208
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=43.98 E-value=21 Score=39.13 Aligned_cols=37 Identities=24% Similarity=0.435 Sum_probs=26.0
Q ss_pred EEEEEeCCCCCCCEEEEEEec----CCCCCccceeEEEcCC
Q 008343 164 IHHVRLTGLKPDTLYHYQCGD----PSIPAMSGTYCFRTMP 200 (569)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~----~~~~~~S~~~~F~T~P 200 (569)
.|+..+++|+|+|+|.|++.. ......++....+|.+
T Consensus 112 ~~~~~v~~L~p~T~Y~~~v~a~d~~G~~s~ds~~V~~~T~~ 152 (608)
T 2uvf_A 112 MQNFTVIGLKPETSYQFTVKAQYADGSLSVASKPITAKTSA 152 (608)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEETTSCBCCCCCCEEEECCC
T ss_pred eeeEEecCCCCCCEEEEEEEEecCCCcccccchhccccccc
Confidence 467889999999999999965 1111345566666655
No 209
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=42.62 E-value=5.3 Score=41.00 Aligned_cols=35 Identities=6% Similarity=-0.022 Sum_probs=9.4
Q ss_pred EEeCC-CCCCCEEEEEEecC------CC---CCccceeEEEcCCC
Q 008343 167 VRLTG-LKPDTLYHYQCGDP------SI---PAMSGTYCFRTMPD 201 (569)
Q Consensus 167 v~l~g-L~P~T~Y~Yrvg~~------~~---~~~S~~~~F~T~P~ 201 (569)
+.|.+ |+|+|.|.+||... .. ..||+...|+|...
T Consensus 292 ~~l~~~L~p~t~Y~~qVRa~~~~~~~~~g~WSeWS~~~~~~t~~~ 336 (380)
T 3lb6_C 292 TYTLKTTNETRQLCFVVRSKVNIYCSDDGIWSEWSDKQCWEGEDL 336 (380)
T ss_dssp CC------------CCEEEEECTTTCSSCCCCCCCCC--------
T ss_pred EEEeCccCCCcEEEEEEEEEEcccCCCCCCCCCCCCCEEEeCCCC
Confidence 45788 99999999998543 11 35678888988644
No 210
>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=41.47 E-value=13 Score=34.54 Aligned_cols=35 Identities=23% Similarity=0.319 Sum_probs=26.0
Q ss_pred EEEeCCCCCCCEEEEEEecC-----CCCCccceeEEEcCC
Q 008343 166 HVRLTGLKPDTLYHYQCGDP-----SIPAMSGTYCFRTMP 200 (569)
Q Consensus 166 ~v~l~gL~P~T~Y~Yrvg~~-----~~~~~S~~~~F~T~P 200 (569)
.++|.+|+|+|.|..+|..- ..+.+|....|+|..
T Consensus 161 ~~~i~~L~p~t~Ycv~Vra~~~~~~~~g~~S~~~C~~t~~ 200 (206)
T 4doh_B 161 PVHLETMEPGAAYCVKAQTFVKAIGRYSAFSQTECVEVQG 200 (206)
T ss_dssp EEEEEECCSSSCEEEEEEEEEGGGTEECCCCCCEEECC--
T ss_pred EEEEeCCCCCCcEEEEEEEEecCCCCCCCCCCCEeEEccc
Confidence 57899999999999998632 224678888888864
No 211
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=38.97 E-value=5.9 Score=42.53 Aligned_cols=35 Identities=23% Similarity=0.253 Sum_probs=26.5
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC--CCccceeEEEcC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSI--PAMSGTYCFRTM 199 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~--~~~S~~~~F~T~ 199 (569)
..++|+||+|||.|.++|...+. ..+|....|+|.
T Consensus 552 ~~~~~~~L~p~t~Y~~~V~A~n~~G~~~S~~~~~~T~ 588 (589)
T 3l5h_A 552 TEYTLSSLTSDTLYMVRMAAYTDEGGKDGPEFTFTTP 588 (589)
T ss_dssp CBCCBCSCCSSCCEECCEEEEETTEEEECCCCEECCC
T ss_pred cEEEecCCCCCCEEEEEEEEEeCCCCCCCCCeEEecC
Confidence 34678999999999999865432 357778888875
No 212
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=37.75 E-value=26 Score=40.17 Aligned_cols=37 Identities=22% Similarity=0.292 Sum_probs=27.4
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCC------ccceeEEEcCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPSIPA------MSGTYCFRTMPD 201 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~~~~------~S~~~~F~T~P~ 201 (569)
...+|+||+|+|.|.++|...+..+ .+....++|.|.
T Consensus 747 t~~~i~gL~p~t~Y~~~V~A~n~~G~g~~~s~s~~v~~~T~~~ 789 (897)
T 2dtg_E 747 ESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMPE 789 (897)
T ss_dssp SEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCCC
T ss_pred eEEEECCCCCCcEEEEEEEEEeCCCCCCCCCCCceeEEeccCc
Confidence 4678999999999999997654322 245678888863
No 213
>2mcm_A Macromomycin; apoprotein; 1.50A {Streptomyces macromomyceticus} SCOP: b.1.7.1
Probab=36.06 E-value=29 Score=29.07 Aligned_cols=28 Identities=43% Similarity=0.659 Sum_probs=22.2
Q ss_pred ccCCccccccCeEEEEEeCCCCCCCEEEEEE
Q 008343 152 PFLGLQNYTSGIIHHVRLTGLKPDTLYHYQC 182 (569)
Q Consensus 152 p~~g~~~~~~~~~h~v~l~gL~P~T~Y~Yrv 182 (569)
|..|+ .+|-..+|..+||.|++.||--.
T Consensus 8 PatgL---~DGq~VtV~~tGl~p~~~y~v~~ 35 (112)
T 2mcm_A 8 PATGL---SNGQTVTVSATGLTPGTVYHVGQ 35 (112)
T ss_dssp SCSSB---CTTEEEEEEEESCCTTCEEEEEE
T ss_pred CCCCC---CCCCEEEEEEEccCCCCeEEEEE
Confidence 44555 45788999999999999998743
No 214
>1noa_A Neocarzinostatin; antibacterial protein; 1.50A {Streptomyces carzinostaticus} SCOP: b.1.7.1 PDB: 1nco_A 1o5p_A* 1j5h_A 1j5i_A* 2g0k_A 2g0l_A* 2cbq_A* 2cbo_A* 2cbm_A* 2cbt_A*
Probab=35.21 E-value=29 Score=29.11 Aligned_cols=28 Identities=32% Similarity=0.471 Sum_probs=22.2
Q ss_pred ccCCccccccCeEEEEEeCCCCCCCEEEEEE
Q 008343 152 PFLGLQNYTSGIIHHVRLTGLKPDTLYHYQC 182 (569)
Q Consensus 152 p~~g~~~~~~~~~h~v~l~gL~P~T~Y~Yrv 182 (569)
|..|+ .+|-..+|..+||.|++.||--.
T Consensus 9 PatgL---~DGq~VtV~~tGl~p~~~y~v~~ 36 (113)
T 1noa_A 9 PSSGL---SDGTVVKVAGAGLQAGTAYDVGQ 36 (113)
T ss_dssp SCSSC---CTTCEEEEEEESCCTTCEEEEEE
T ss_pred CCCCC---CCCCEEEEEEEccCCCCeEEEEE
Confidence 44555 35778999999999999998743
No 215
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=30.91 E-value=56 Score=31.33 Aligned_cols=22 Identities=0% Similarity=-0.331 Sum_probs=18.9
Q ss_pred EEEEeCCC-CCCCEEEEEEecCC
Q 008343 165 HHVRLTGL-KPDTLYHYQCGDPS 186 (569)
Q Consensus 165 h~v~l~gL-~P~T~Y~Yrvg~~~ 186 (569)
..+.|++| +|++.|.+||...+
T Consensus 158 ~~~~i~~L~~p~t~Y~f~V~A~N 180 (303)
T 1i1r_A 158 TSCTVDYSTVYFVNIEVWVEAEN 180 (303)
T ss_dssp TEEECSSCCCTTSCEEEEEEEEE
T ss_pred eEEEECCcCcccccEEEEEEEEc
Confidence 46789999 99999999997655
No 216
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=27.22 E-value=13 Score=38.15 Aligned_cols=37 Identities=27% Similarity=0.437 Sum_probs=0.0
Q ss_pred EEEEeCCCCCCCEEEEEEecCC-------CCCccceeEEEcCCC
Q 008343 165 HHVRLTGLKPDTLYHYQCGDPS-------IPAMSGTYCFRTMPD 201 (569)
Q Consensus 165 h~v~l~gL~P~T~Y~Yrvg~~~-------~~~~S~~~~F~T~P~ 201 (569)
..++|++|+|+|.|..+|.... .+.+|+...|+|.+.
T Consensus 367 ~~~~l~~L~p~t~Y~~~V~A~~~~~~~~g~g~~S~~~~~~T~~~ 410 (414)
T 3se4_A 367 TDVTVPNLKPLTVYCVKARAHTMDEKLNKSSVFSDAVCEKTKPG 410 (414)
T ss_dssp --------------------------------------------
T ss_pred CeEEeCCCCCCCeEEEEEEEEecccccCCCCCCCCCEeEEeCCC
Confidence 4578999999999999986532 246778888888764
No 217
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=26.95 E-value=1.9e+02 Score=25.71 Aligned_cols=96 Identities=10% Similarity=0.075 Sum_probs=49.0
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCcccccCCCCCCCCCCCccEEEEcccCCCCceEEEeEEEEeeeecccCCccccccCe
Q 008343 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGI 163 (569)
Q Consensus 84 ~~P~qi~ls~~~~p~s~~I~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~ 163 (569)
..|..+......+.++|.++|...... |. ...=.|+|......-... ...... .+.. ....
T Consensus 6 ~~P~~l~c~~~~~~~~~~~~W~p~~~~-~~--------~~~Y~l~~~~~~~~~~~~--~~~~~~---~~~~-----~~~~ 66 (215)
T 1cd9_B 6 ASPSNLSCLMHLTTNSLVCQWEPGPET-HL--------PTSFILKSFRSRADCQYQ--GDTIPD---CVAK-----KRQN 66 (215)
T ss_dssp CCCEEEEEEEETTTTEEEEEEECCSCC-SS--------CCEEEEEEEECCGGGCSC--CCEEEE---EECC-----TTCC
T ss_pred CCCeeeeeecCCCcccEEEEecCCCCC-CC--------ceeEEEEEEecCCccccc--cccccc---CCCC-----CCCc
Confidence 357777655444578999999965321 10 012346665432110000 000000 0000 0113
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCC--CccceeEEEc
Q 008343 164 IHHVRLTGLKPDTLYHYQCGDPSIP--AMSGTYCFRT 198 (569)
Q Consensus 164 ~h~v~l~gL~P~T~Y~Yrvg~~~~~--~~S~~~~F~T 198 (569)
..++.+.+|.|++.|.++|...+.- ..|....|.+
T Consensus 67 ~~~~~~~~L~~~~~Y~~~V~A~N~~G~~~s~~~~~~~ 103 (215)
T 1cd9_B 67 NCSIPRKNLLLYQYMAIWVQAENMLGSSESPKLCLDP 103 (215)
T ss_dssp EEEEEGGGCCTTSCEEEEEEEEETTEEEECCCEEECG
T ss_pred EEEECCcccccceEEEEEEEEECCCCCccCccEEEch
Confidence 4567889999999999999765421 2344555654
No 218
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=25.48 E-value=5.1e+02 Score=25.73 Aligned_cols=25 Identities=8% Similarity=0.238 Sum_probs=19.2
Q ss_pred CCCCeEEEEecCCCCceEEEEEcCc
Q 008343 84 FEPEQISVSLSSAHDSVWISWITGE 108 (569)
Q Consensus 84 ~~P~qi~ls~~~~p~s~~I~W~T~~ 108 (569)
..|..+.++-.+..+++.|+|.-..
T Consensus 33 ~pP~nl~v~~~~~~~~v~LsW~p~~ 57 (380)
T 3lb6_C 33 NPPQDFEIVDPGYLGYLYLQWQPPL 57 (380)
T ss_dssp CCCEEEEEECCSSSSEEEEEEECCC
T ss_pred CcCCceEEEecCcCceEEEEECCCC
Confidence 3588888876555789999998654
Done!